Query psy15206
Match_columns 232
No_of_seqs 161 out of 1565
Neff 11.7
Searched_HMMs 29240
Date Fri Aug 16 23:24:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15206.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15206hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rik_A Titin; I-SET IG fold, p 100.0 4.3E-34 1.5E-38 210.1 28.4 221 9-231 2-268 (284)
2 3b43_A Titin; I-SET IG fold, e 100.0 3E-32 1E-36 218.2 26.4 219 11-231 196-460 (570)
3 3b43_A Titin; I-SET IG fold, e 100.0 5E-32 1.7E-36 217.0 27.2 224 6-231 284-554 (570)
4 2yd9_A Receptor-type tyrosine- 100.0 1.3E-31 4.4E-36 198.8 23.9 219 9-231 3-275 (304)
5 1qz1_A Neural cell adhesion mo 100.0 4.3E-31 1.5E-35 194.7 25.1 218 12-231 2-274 (291)
6 3laf_A Deleted in colorectal c 100.0 1.4E-30 4.7E-35 200.3 24.3 223 7-231 116-385 (403)
7 2v5m_A Dscam; neurobiology SPL 100.0 2E-30 6.8E-35 198.5 23.7 221 8-231 99-373 (388)
8 2wim_A N-CAM 2, NCAM2, neural 100.0 1.6E-30 5.4E-35 191.7 21.9 219 10-231 2-268 (291)
9 3qs7_E FL cytokine receptor; i 100.0 1.2E-30 4.1E-35 201.5 19.1 216 7-231 135-398 (423)
10 3p3y_A Neurofascin; IG domains 100.0 7.3E-30 2.5E-34 196.3 23.1 224 7-231 110-387 (404)
11 3kld_A Contactin 4, axcam, BIG 100.0 8.2E-30 2.8E-34 195.0 21.9 219 12-231 101-367 (384)
12 3rjd_A High affinity immunoglo 100.0 1E-28 3.5E-33 179.3 24.9 211 12-231 1-243 (262)
13 1cs6_A Axonin-1; neural cell a 100.0 3.6E-29 1.2E-33 191.2 21.6 221 8-231 96-366 (382)
14 3ejj_X Macrophage colony-stimu 100.0 8.6E-29 3E-33 182.2 22.8 216 11-231 3-265 (289)
15 2o26_X MAST/stem cell growth f 100.0 2.7E-29 9.2E-34 185.1 19.9 215 10-231 10-272 (290)
16 2ec8_A MAST/stem cell growth f 100.0 5.5E-29 1.9E-33 197.6 21.9 222 7-231 109-395 (524)
17 3laf_A Deleted in colorectal c 100.0 3.2E-28 1.1E-32 187.1 25.1 219 11-231 20-295 (403)
18 1e07_A Carcinoembryonic antige 100.0 1.5E-28 5.3E-33 199.4 24.1 220 7-231 375-624 (642)
19 2y25_A Myomesin; structural pr 100.0 1.1E-29 3.6E-34 189.4 15.3 219 9-231 4-299 (317)
20 3qs9_E FL cytokine receptor; i 100.0 8E-29 2.7E-33 196.0 17.3 204 21-231 147-398 (527)
21 3p3y_A Neurofascin; IG domains 100.0 1.5E-28 5.1E-33 188.9 16.8 224 8-231 12-295 (404)
22 4dep_C Interleukin-1 receptor 100.0 1.7E-28 5.9E-33 185.3 16.6 212 20-231 14-317 (349)
23 1bih_A Hemolin; insect immunit 100.0 5.2E-28 1.8E-32 185.5 19.5 209 20-231 107-380 (395)
24 4dkd_C Macrophage colony-stimu 100.0 2.6E-28 9E-33 179.8 16.4 216 10-231 2-265 (292)
25 1e07_A Carcinoembryonic antige 100.0 1.8E-27 6E-32 193.2 22.5 208 20-231 210-446 (642)
26 3qs7_E FL cytokine receptor; i 100.0 3.2E-28 1.1E-32 187.9 17.0 212 14-231 50-310 (423)
27 2ec8_A MAST/stem cell growth f 100.0 8.2E-28 2.8E-32 190.8 19.8 220 6-231 30-293 (524)
28 3kld_A Contactin 4, axcam, BIG 100.0 3.2E-27 1.1E-31 180.6 22.0 221 10-231 3-278 (384)
29 1itb_B Type 1 interleukin-1 re 100.0 2.2E-27 7.6E-32 176.8 19.9 212 20-231 12-298 (315)
30 3dmk_A DOWN syndrome cell adhe 100.0 7.8E-28 2.7E-32 200.1 18.8 222 7-231 522-793 (816)
31 3oq3_B IFN-alpha/beta binding 100.0 1.9E-27 6.5E-32 178.3 19.0 210 20-231 36-314 (329)
32 3u83_A Poliovirus receptor-rel 100.0 5.8E-28 2E-32 181.1 15.8 223 8-231 9-304 (331)
33 2wng_A Tyrosine-protein phosph 100.0 1.8E-27 6.1E-32 178.2 17.9 216 13-231 4-303 (327)
34 3qs9_E FL cytokine receptor; i 100.0 3.8E-27 1.3E-31 186.5 20.4 213 7-231 224-494 (527)
35 1bih_A Hemolin; insect immunit 100.0 1.4E-27 4.6E-32 183.1 16.8 221 7-231 1-290 (395)
36 3dmk_A DOWN syndrome cell adhe 100.0 1.8E-26 6.1E-31 191.9 24.0 221 7-231 338-600 (816)
37 1ry7_B FGFR-3, fibroblast grow 100.0 1.3E-28 4.5E-33 184.8 10.2 211 20-231 15-311 (334)
38 1cs6_A Axonin-1; neural cell a 100.0 4.9E-27 1.7E-31 179.4 18.8 220 11-231 3-277 (382)
39 2y23_A Myomesin; structural pr 100.0 1.2E-26 4E-31 172.5 20.1 208 20-231 8-296 (312)
40 2oz4_A Intercellular adhesion 100.0 6E-27 2.1E-31 170.4 18.0 202 11-231 5-248 (265)
41 3vh8_G Killer cell immunoglobu 100.0 1.1E-26 3.8E-31 173.1 19.2 215 7-231 19-292 (316)
42 1wio_A CD4, T-cell surface gly 100.0 3.9E-27 1.3E-31 178.9 15.5 190 22-231 105-348 (363)
43 4fqp_A Poliovirus receptor; im 99.9 1.6E-26 5.3E-31 172.1 17.9 211 20-231 7-288 (313)
44 2v5m_A Dscam; neurobiology SPL 99.9 1.6E-26 5.3E-31 176.9 18.1 220 11-231 2-290 (388)
45 2rcj_C Light chain; immunoglob 99.9 3.6E-26 1.2E-30 181.4 20.8 218 10-231 112-404 (523)
46 3o4o_C Interleukin-1 receptor 99.9 1.1E-27 3.8E-32 180.2 10.4 222 9-231 15-319 (339)
47 3mjg_X Beta-type platelet-deri 99.9 3.3E-26 1.1E-30 168.5 17.8 208 13-231 1-262 (289)
48 1wio_A CD4, T-cell surface gly 99.9 1.2E-26 4.1E-31 176.2 15.5 195 22-231 3-275 (363)
49 4fom_A Poliovirus receptor-rel 99.9 9E-27 3.1E-31 173.0 13.3 212 20-231 6-284 (308)
50 2rcj_C Light chain; immunoglob 99.9 1.9E-25 6.6E-30 177.2 21.1 209 20-231 7-300 (523)
51 1z7z_I Intercellular adhesion 99.9 2.3E-25 7.7E-30 173.7 19.2 214 6-231 79-347 (450)
52 2yd6_A PTPRD protein; hydrolas 99.9 9.3E-25 3.2E-29 153.7 20.3 158 72-231 5-187 (212)
53 1rhf_A Tyrosine-protein kinase 99.9 1.2E-24 4.1E-29 149.5 18.6 150 80-231 8-166 (182)
54 2a38_A Titin; Z1Z2, structural 99.9 2E-24 6.9E-29 149.8 19.3 157 73-231 5-179 (194)
55 2yd1_A Tyrosine-protein phosph 99.9 4.5E-24 1.5E-28 150.2 21.1 159 72-231 5-183 (212)
56 3k0w_A Mucosa-associated lymph 99.9 1.7E-24 5.8E-29 153.0 18.9 147 80-231 24-185 (218)
57 2c5d_C AXL oncogene, tyrosine- 99.9 1.4E-24 4.7E-29 150.8 17.9 150 80-231 8-176 (195)
58 2ocw_A Polymeric-immunoglobuli 99.9 4.3E-24 1.5E-28 171.6 22.9 209 20-231 224-529 (585)
59 2iep_A Muscle-specific kinase 99.9 2.1E-24 7.2E-29 149.5 18.3 158 73-231 7-173 (192)
60 2wv3_A Neuroplastin; igcam, me 99.9 5.8E-24 2E-28 147.1 20.5 154 73-231 3-174 (190)
61 1qgc_4 Protein (immunoglobulin 99.9 5.3E-25 1.8E-29 171.0 16.7 208 20-231 8-317 (438)
62 1qgc_4 Protein (immunoglobulin 99.9 7E-25 2.4E-29 170.3 16.2 218 11-231 115-423 (438)
63 1z7z_I Intercellular adhesion 99.9 7.3E-25 2.5E-29 170.8 16.0 211 15-231 2-266 (450)
64 2j8h_A Titin, connectin; cardi 99.9 4E-24 1.4E-28 148.6 17.8 157 73-231 4-181 (197)
65 2ocw_A Polymeric-immunoglobuli 99.9 1.5E-23 5.3E-28 168.4 23.3 216 6-230 106-425 (585)
66 2v44_A NCAM2, neural cell adhe 99.9 4.8E-24 1.6E-28 147.3 17.5 151 80-231 8-171 (189)
67 2wqr_A IG epsilon chain C regi 99.9 4.5E-25 1.5E-29 165.0 13.0 220 10-231 5-304 (323)
68 1epf_A NCAM, protein (neural c 99.9 2.7E-24 9.2E-29 148.8 16.0 152 80-231 8-175 (191)
69 4fa8_A Secreted protein BARF1; 99.9 1E-24 3.6E-29 152.0 13.6 147 84-231 3-186 (203)
70 3lcy_A Titin; A-BAND, IG tande 99.9 9.4E-24 3.2E-28 146.7 18.2 158 72-231 6-180 (197)
71 2nzi_A Titin; IG-domain, FNIII 99.9 1.3E-23 4.5E-28 155.7 19.8 215 10-230 2-273 (305)
72 3v2a_R Vascular endothelial gr 99.9 4.4E-27 1.5E-31 194.4 0.0 224 6-231 414-740 (772)
73 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.9E-23 6.7E-28 144.2 18.3 152 80-231 8-172 (189)
74 2rik_A Titin; I-SET IG fold, p 99.9 1.1E-22 3.9E-27 149.1 22.0 158 72-231 4-175 (284)
75 1f97_A Junction adhesion molec 99.9 1.1E-23 3.7E-28 148.0 15.2 153 79-231 6-189 (212)
76 1igt_B IGG2A intact antibody - 99.9 3.7E-24 1.3E-28 166.6 13.9 219 12-231 123-429 (444)
77 3rbs_A Myomesin-1; immunoglobu 99.9 9.8E-23 3.4E-27 142.6 19.0 145 83-231 11-191 (207)
78 2va4_A NCAM2, N-CAM 2, neural 99.9 1.3E-22 4.4E-27 140.4 19.5 147 83-231 13-177 (192)
79 2vr9_A Roundabout 1, ROBO; imm 99.9 1.8E-23 6.3E-28 147.5 14.5 159 72-231 8-190 (217)
80 3v2a_R Vascular endothelial gr 99.9 1.4E-23 4.8E-28 173.5 15.4 210 20-231 133-401 (772)
81 2jll_A NCAM2, neural cell adhe 99.9 2.2E-22 7.5E-27 153.9 20.3 150 81-231 7-178 (389)
82 3sgj_C Human FCG3A receptor; r 99.9 7.9E-23 2.7E-27 142.9 15.2 142 80-231 13-157 (204)
83 2v9r_A Roundabout homolog 1; p 99.9 7.3E-23 2.5E-27 143.8 14.5 158 73-231 9-185 (212)
84 2yd9_A Receptor-type tyrosine- 99.9 2.5E-22 8.6E-27 148.8 17.9 159 71-231 4-184 (304)
85 1nbq_A JAM, junctional adhesio 99.9 1.6E-23 5.4E-28 146.8 10.8 154 78-231 8-191 (209)
86 2d3v_A Leukocyte immunoglobuli 99.9 5.1E-23 1.8E-27 143.0 12.3 144 85-231 15-176 (196)
87 1za6_B IGG heavy chain; immuno 99.9 3.9E-23 1.3E-27 155.7 12.5 210 20-231 7-325 (344)
88 1fnl_A Low affinity immunoglob 99.9 2.7E-22 9.4E-27 136.9 15.2 142 80-231 13-157 (175)
89 2r15_A Myomesin-1; sarcomeric 99.9 1.1E-21 3.8E-26 137.8 18.6 145 86-231 14-194 (212)
90 1uct_A Immunoglobulin alpha FC 99.9 1.7E-22 5.7E-27 142.6 14.2 156 72-231 8-177 (218)
91 1igt_B IGG2A intact antibody - 99.9 1.7E-22 5.7E-27 157.3 15.6 209 20-231 7-325 (444)
92 2jll_A NCAM2, neural cell adhe 99.9 8.9E-21 3.1E-25 145.0 24.7 214 12-230 1-271 (389)
93 1qz1_A Neural cell adhesion mo 99.9 2.3E-22 8E-27 147.9 15.3 152 80-231 8-175 (291)
94 2nzi_A Titin; IG-domain, FNIII 99.9 5.5E-22 1.9E-26 146.9 17.4 157 73-231 4-181 (305)
95 1ugn_A LIR1, leukocyte immunog 99.9 2.6E-22 8.9E-27 139.7 14.5 154 73-231 5-177 (198)
96 2gi7_A GPVI protein; IG-like d 99.9 3.3E-22 1.1E-26 137.6 14.1 150 71-231 6-164 (184)
97 1f2q_A High affinity immunoglo 99.9 3.3E-22 1.1E-26 136.6 14.0 142 80-231 10-154 (176)
98 3grw_A Fibroblast growth facto 99.9 1E-21 3.5E-26 140.7 16.7 150 81-231 22-202 (241)
99 3p2t_A Leukocyte immunoglobuli 99.9 1.8E-22 6.3E-27 140.2 12.2 147 81-231 12-175 (196)
100 3s97_C Contactin-1; carbonic a 99.9 5.8E-22 2E-26 138.0 14.6 152 80-231 14-185 (201)
101 1iga_A IGA1; immunoglobulin; N 99.9 1.8E-21 6.2E-26 152.7 19.0 215 12-231 127-438 (475)
102 1hzh_H IGG, immunoglobulin hea 99.9 9.7E-23 3.3E-27 159.2 11.5 219 12-231 132-438 (457)
103 1igy_B IGG1 intact antibody MA 99.9 2E-24 6.8E-29 167.7 1.8 218 12-231 119-419 (434)
104 1oll_A NK receptor; immune sys 99.9 5.9E-22 2E-26 136.8 14.0 144 85-231 14-169 (188)
105 3d9a_L Light chain of hyhel10 99.9 6.8E-22 2.3E-26 139.1 14.4 151 81-231 8-197 (213)
106 1hng_A CD2; T lymphocyte adhes 99.9 1.1E-21 3.7E-26 134.0 14.7 141 84-231 6-160 (176)
107 3bp6_B Programmed cell death 1 99.9 1.6E-21 5.5E-26 136.1 15.4 149 81-231 9-177 (202)
108 1vca_A VCAM-D1,2, human vascul 99.9 9.3E-22 3.2E-26 137.3 13.7 144 85-231 12-174 (202)
109 3mj8_L Stimulatory hamster ant 99.9 1.7E-21 5.8E-26 137.0 15.0 149 83-231 9-197 (213)
110 3nl4_L Antigen binding fragmen 99.9 1.5E-21 5.2E-26 137.3 14.6 151 81-231 8-198 (213)
111 2iep_A Muscle-specific kinase 99.9 2E-21 7E-26 134.3 14.7 155 9-165 4-192 (192)
112 1hzh_H IGG, immunoglobulin hea 99.9 9.3E-22 3.2E-26 153.6 14.2 209 20-231 7-334 (457)
113 2c1o_A IGK-C protein; FAB frag 99.9 9.7E-22 3.3E-26 142.0 13.2 190 20-231 6-239 (254)
114 2v9r_A Roundabout homolog 1; p 99.9 1.9E-21 6.5E-26 136.5 14.3 161 10-171 7-210 (212)
115 3ry4_A Low affinity immunoglob 99.9 3.6E-21 1.2E-25 130.6 15.1 142 80-231 10-154 (170)
116 1lk3_L 9D7 light chain; antige 99.9 2.3E-21 7.8E-26 136.1 14.0 151 81-231 7-196 (210)
117 1jbj_A CD3 epsilon and gamma e 99.9 7E-22 2.4E-26 136.1 11.1 137 84-231 9-173 (186)
118 3ojm_B Fibroblast growth facto 99.9 3.8E-21 1.3E-25 136.7 15.2 149 82-231 27-205 (231)
119 3b5h_A Cervical EMMPRIN, HAB18 99.9 6E-21 2.1E-25 131.2 15.5 141 84-231 8-167 (184)
120 2yd1_A Tyrosine-protein phosph 99.9 1.8E-20 6.1E-25 131.7 18.0 153 10-164 4-201 (212)
121 2yd6_A PTPRD protein; hydrolas 99.9 1.3E-20 4.4E-25 132.5 17.1 157 9-167 3-208 (212)
122 2pet_A Lutheran blood group gl 99.9 4.6E-21 1.6E-25 136.4 15.0 152 80-231 6-209 (231)
123 2wim_A N-CAM 2, NCAM2, neural 99.9 2.5E-21 8.5E-26 142.4 14.0 151 80-231 10-173 (291)
124 3r4d_A CEA-related cell adhesi 99.9 8.8E-21 3E-25 132.8 16.1 145 84-231 9-183 (208)
125 3jz7_A MCAR, CAR, coxsackievir 99.9 3.5E-21 1.2E-25 135.3 13.8 149 82-231 8-196 (214)
126 1nkr_A P58-CL42 KIR; inhibitor 99.9 3.5E-21 1.2E-25 134.3 13.2 143 84-231 17-181 (201)
127 2fbo_J V1V2;, variable region- 99.9 4.6E-21 1.6E-25 138.0 14.0 152 80-231 8-233 (250)
128 2ifg_A High affinity nerve gro 99.9 7.5E-22 2.6E-26 148.9 10.2 156 70-231 155-329 (347)
129 1q0x_L FAB 9B1, light chain; a 99.9 1E-20 3.5E-25 132.9 15.2 151 81-231 7-199 (212)
130 3rjd_A High affinity immunoglo 99.9 2.6E-20 9E-25 134.9 16.9 142 80-231 7-151 (262)
131 2x1w_L Vascular endothelial gr 99.9 6E-21 2E-25 134.3 12.6 150 81-231 14-191 (213)
132 1iga_A IGA1; immunoglobulin; N 99.9 9.3E-20 3.2E-24 143.0 20.0 209 20-231 8-329 (475)
133 2a38_A Titin; Z1Z2, structural 99.9 2.4E-20 8.3E-25 129.1 14.8 149 10-161 3-193 (194)
134 2j8h_A Titin, connectin; cardi 99.9 6.2E-20 2.1E-24 127.4 16.7 150 11-162 3-196 (197)
135 1nqb_A Single-chain antibody f 99.9 4.8E-20 1.6E-24 133.3 16.6 151 81-231 7-216 (256)
136 2ny1_B T-cell surface glycopro 99.9 1.6E-20 5.4E-25 129.1 13.3 139 83-231 4-163 (184)
137 3s96_B 3B5H10 FAB light chain; 99.9 1.2E-20 4E-25 133.1 13.0 149 83-231 9-204 (218)
138 3r06_A Anti-mouse CD3epsilon a 99.9 2.1E-20 7.1E-25 131.4 14.1 151 81-231 8-197 (213)
139 1igy_B IGG1 intact antibody MA 99.9 4.1E-22 1.4E-26 154.7 5.5 209 20-231 6-315 (434)
140 3lcy_A Titin; A-BAND, IG tande 99.9 8.7E-20 3E-24 126.5 16.7 153 8-162 3-195 (197)
141 2c5d_C AXL oncogene, tyrosine- 99.8 1E-19 3.5E-24 126.2 16.9 146 11-161 1-191 (195)
142 1p6f_A NKP46, natural cytotoxi 99.8 3E-20 1E-24 133.0 14.6 144 85-231 17-172 (242)
143 2if7_A SLAM family member 6; N 99.8 1.8E-19 6.1E-24 124.8 18.0 147 81-231 5-176 (193)
144 2y25_A Myomesin; structural pr 99.8 1.1E-21 3.7E-26 146.0 7.3 157 72-231 6-184 (317)
145 3sob_L Antibody light chain; b 99.8 4E-20 1.4E-24 132.0 15.0 151 81-231 31-220 (237)
146 3oq3_B IFN-alpha/beta binding 99.8 6.3E-21 2.2E-25 142.8 11.2 149 82-231 37-202 (329)
147 1fnl_A Low affinity immunoglob 99.8 2E-19 6.9E-24 122.6 17.7 147 9-162 4-173 (175)
148 1rhf_A Tyrosine-protein kinase 99.8 1.5E-19 5E-24 124.0 16.7 143 12-161 2-181 (182)
149 4frw_A Poliovirus receptor-rel 99.8 6.4E-20 2.2E-24 129.0 15.1 151 81-231 6-195 (218)
150 2y23_A Myomesin; structural pr 99.8 5.9E-20 2E-24 136.3 15.7 147 82-230 9-185 (312)
151 1ry7_B FGFR-3, fibroblast grow 99.8 4.7E-22 1.6E-26 149.1 4.1 149 81-231 15-200 (334)
152 4dep_C Interleukin-1 receptor 99.8 8.4E-20 2.9E-24 137.7 16.3 150 81-231 14-197 (349)
153 3sgj_C Human FCG3A receptor; r 99.8 2.2E-19 7.6E-24 125.4 17.2 149 10-165 5-176 (204)
154 3esu_F Antibody 14B7* light ch 99.8 5.9E-20 2E-24 132.3 14.5 152 80-231 10-230 (250)
155 2vr9_A Roundabout 1, ROBO; imm 99.8 1.4E-19 4.7E-24 127.6 15.8 145 9-154 6-198 (217)
156 1moe_A Anti-CEA MAB T84.66; an 99.8 1E-19 3.5E-24 130.3 15.3 151 81-231 8-218 (240)
157 2wv3_A Neuroplastin; igcam, me 99.8 9.7E-19 3.3E-23 120.7 19.8 147 11-161 2-188 (190)
158 2ghw_B Anti-SARS SCFV antibody 99.8 8.4E-20 2.9E-24 131.3 14.9 150 82-231 10-225 (247)
159 1hnf_A CD2; T lymphocyte adhes 99.8 6E-20 2.1E-24 125.6 13.5 140 82-231 7-165 (182)
160 3sbw_C Programmed cell death 1 99.8 2.3E-19 7.8E-24 126.9 16.9 149 81-231 8-195 (222)
161 1mq8_A ICAM-1, intercellular a 99.8 1.7E-20 5.9E-25 136.9 11.3 212 20-231 6-266 (291)
162 2wng_A Tyrosine-protein phosph 99.8 1.2E-19 4E-24 135.8 16.1 152 80-231 9-200 (327)
163 3tv3_L PGT128 light chain, IG 99.8 5.3E-20 1.8E-24 129.2 13.3 147 83-231 9-195 (211)
164 1f2q_A High affinity immunoglo 99.8 5.4E-20 1.9E-24 125.5 12.9 151 9-166 1-174 (176)
165 1nfd_E H57 FAB; complex (immun 99.8 3.3E-21 1.1E-25 135.5 7.0 151 81-231 6-196 (212)
166 2xzc_L FAB A.17 light chain; i 99.8 9.9E-20 3.4E-24 128.3 14.6 151 81-231 7-199 (216)
167 3k0w_A Mucosa-associated lymph 99.8 5.2E-19 1.8E-23 124.8 18.1 148 10-164 16-203 (218)
168 2p1y_A Bispecific alpha/beta T 99.8 2.7E-19 9.1E-24 127.9 16.8 150 81-231 7-219 (238)
169 1zvo_C Myeloma immunoglobulin 99.8 7.7E-19 2.6E-23 138.9 21.0 143 88-231 149-381 (512)
170 3o4o_C Interleukin-1 receptor 99.8 1.7E-20 5.8E-25 141.0 10.9 157 73-231 18-200 (339)
171 2v5t_A NCAM2, N-CAM 2, neural 99.8 3.1E-19 1E-23 123.0 16.2 148 12-161 2-186 (189)
172 3pv7_A B7-H6, IG-like domain-c 99.8 2.9E-19 9.9E-24 128.5 16.5 150 80-231 9-208 (248)
173 3bkj_L WO2 IGG2A FAB fragment 99.8 9.9E-20 3.4E-24 131.3 13.9 151 81-231 41-235 (252)
174 3vh8_G Killer cell immunoglobu 99.8 6.2E-20 2.1E-24 136.7 13.3 158 69-231 20-194 (316)
175 2znx_A SCFV; fluorotryptohpan, 99.8 2.6E-19 8.8E-24 128.4 16.0 152 80-231 7-220 (242)
176 4f80_A Butyrophilin subfamily 99.8 1E-19 3.5E-24 129.1 13.6 147 82-231 12-197 (226)
177 1dr9_A B7-1 (CD80), T lymphocy 99.8 2.3E-19 7.8E-24 125.0 15.0 144 84-231 4-185 (201)
178 3bqu_C 3H6 FAB light chain; be 99.8 6.3E-21 2.2E-25 136.0 7.2 151 81-231 30-219 (233)
179 1zvo_C Myeloma immunoglobulin 99.8 1.3E-18 4.6E-23 137.5 20.9 143 86-231 309-487 (512)
180 1b6u_A KIR2DL3, P58 killer cel 99.8 1.3E-19 4.5E-24 130.7 13.6 143 84-231 16-180 (257)
181 2o26_X MAST/stem cell growth f 99.8 1.4E-19 4.8E-24 133.1 14.1 146 73-231 12-166 (290)
182 3uzq_A Anti-dengue MAB 4E11; d 99.8 1.4E-19 4.8E-24 130.6 13.8 151 81-231 8-227 (253)
183 1epf_A NCAM, protein (neural c 99.8 9.3E-19 3.2E-23 120.8 17.0 138 12-151 2-180 (191)
184 4dzb_B Vbeta2 (MAIT T cell rec 99.8 4.3E-19 1.5E-23 127.5 15.6 151 81-231 8-215 (246)
185 1sy6_A T-cell surface glycopro 99.8 6.1E-20 2.1E-24 128.2 10.7 131 87-231 16-187 (204)
186 1ccz_A Protein (CD58); LFA-3, 99.8 2.3E-19 7.7E-24 121.8 13.1 134 84-231 5-155 (171)
187 3umt_A SCFV heavy chain and li 99.8 2.5E-19 8.6E-24 129.5 13.9 150 82-231 10-228 (256)
188 2vol_A Murine IGG FC; FC, zinc 99.8 3.2E-20 1.1E-24 130.0 8.9 146 86-231 15-192 (207)
189 2rgs_A I, IG gamma-2B heavy ch 99.8 4.3E-20 1.5E-24 130.4 9.6 146 86-231 23-200 (218)
190 1f3r_B FV antibody fragment; I 99.8 7.8E-20 2.7E-24 132.3 11.1 148 84-231 10-229 (257)
191 3grw_A Fibroblast growth facto 99.8 1.1E-18 3.9E-23 124.8 16.9 158 10-168 9-223 (241)
192 1gsm_A Madcam-1, mucosal addre 99.8 2.1E-18 7.3E-23 119.5 17.5 119 84-207 17-142 (210)
193 2va4_A NCAM2, N-CAM 2, neural 99.8 1.2E-18 4.2E-23 120.2 16.3 148 11-161 1-191 (192)
194 3ry4_A Low affinity immunoglob 99.8 1.1E-18 3.7E-23 118.3 15.7 143 12-161 4-169 (170)
195 1qok_A MFE-23 recombinant anti 99.8 5.2E-19 1.8E-23 129.6 15.1 150 81-231 33-251 (282)
196 3auv_A SC-DSFV derived from th 99.8 8.2E-19 2.8E-23 128.2 15.8 152 80-231 18-233 (276)
197 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 2.1E-18 7E-23 124.7 17.4 151 80-231 9-230 (256)
198 3ojm_B Fibroblast growth facto 99.8 1.5E-18 5.1E-23 123.3 16.4 160 7-167 10-225 (231)
199 1c1e_H Catalytic antibody 1E9 99.8 3.2E-19 1.1E-23 125.9 12.6 150 81-231 7-204 (219)
200 3omz_A Human vdelta1 gamma del 99.8 6.2E-19 2.1E-23 127.7 14.0 152 80-231 8-229 (259)
201 3juy_B 3B3 single chain varian 99.8 6.4E-19 2.2E-23 127.4 13.7 152 80-231 12-240 (256)
202 3gkz_A Anti-methamphetamine si 99.8 1.1E-18 3.8E-23 126.2 15.0 151 81-231 15-232 (257)
203 2zg1_A Sialic acid-binding IG- 99.8 6.5E-19 2.2E-23 123.9 13.3 149 80-231 6-197 (214)
204 3mj6_A Junctional adhesion mol 99.8 8E-19 2.7E-23 127.6 14.1 147 80-231 11-221 (268)
205 3ux9_B SCFV antibody; five hel 99.8 2.6E-18 9E-23 124.1 16.5 151 81-231 9-233 (256)
206 4fmk_A Poliovirus receptor-rel 99.8 1.5E-18 5E-23 122.6 14.9 149 83-231 10-201 (225)
207 1svz_A Immunoglobulin;, single 99.8 1.5E-18 5E-23 124.8 14.8 151 81-231 8-226 (247)
208 4fqp_A Poliovirus receptor; im 99.8 2E-18 7E-23 128.3 15.9 156 7-166 112-307 (313)
209 2v44_A NCAM2, neural cell adhe 99.8 5.4E-18 1.8E-22 116.8 16.8 135 14-151 4-176 (189)
210 2dru_A Chimera of CD48 antigen 99.8 3.5E-18 1.2E-22 116.8 15.0 137 82-231 7-165 (180)
211 2j6e_L IGM, FAB light chain; a 99.8 1.4E-19 4.7E-24 129.1 8.2 151 81-231 26-219 (234)
212 3ejj_X Macrophage colony-stimu 99.8 1.2E-18 4.1E-23 128.0 13.5 150 76-231 6-164 (289)
213 2ifg_A High affinity nerve gro 99.8 5.2E-19 1.8E-23 133.4 11.8 152 7-165 153-347 (347)
214 2fbj_H IGA-kappa J539 FAB (hea 99.8 2.7E-18 9.1E-23 121.3 14.2 149 82-231 8-205 (220)
215 4i0k_A CD276 antigen; immunogl 99.8 6.5E-19 2.2E-23 124.5 11.1 145 84-231 5-190 (222)
216 4ei6_B Vbeta16 XV19 type II na 99.8 9.1E-18 3.1E-22 120.5 17.2 150 81-231 9-214 (245)
217 3s97_C Contactin-1; carbonic a 99.8 5.7E-18 1.9E-22 117.7 15.5 148 13-162 8-200 (201)
218 3eow_R Poliovirus receptor; im 99.8 3.8E-19 1.3E-23 125.7 9.7 149 82-231 7-196 (221)
219 1itb_B Type 1 interleukin-1 re 99.8 4.3E-20 1.5E-24 137.4 4.7 149 82-231 13-182 (315)
220 2gjj_A A21 single-chain antibo 99.8 1.1E-17 3.7E-22 121.4 17.2 152 80-231 11-237 (264)
221 3nfj_J T cell receptor beta ch 99.8 9.6E-18 3.3E-22 120.4 16.4 152 80-231 7-214 (245)
222 3pl6_D MBP peptide / T-cell re 99.8 1E-17 3.4E-22 121.9 16.0 151 80-231 32-236 (268)
223 1f97_A Junction adhesion molec 99.8 6.3E-18 2.2E-22 118.4 14.3 148 13-162 2-206 (212)
224 3r4d_A CEA-related cell adhesi 99.8 1.3E-17 4.3E-22 116.7 15.6 144 20-167 6-204 (208)
225 3q5y_A TCR N15 beta; IG, T cel 99.8 1.2E-17 4E-22 119.6 15.6 150 81-231 9-208 (240)
226 1op3_H FAB 2G12, heavy chain; 99.8 4.8E-18 1.7E-22 120.4 12.9 149 82-231 8-209 (225)
227 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 2.5E-18 8.5E-23 121.6 11.4 148 83-231 9-207 (222)
228 3d9a_H Heavy chain of hyhel10 99.8 3.8E-18 1.3E-22 119.6 12.2 147 82-231 8-198 (210)
229 3u83_A Poliovirus receptor-rel 99.8 3E-17 1E-21 122.8 17.3 157 74-231 14-214 (331)
230 1x9q_A SCFV, 4M5.3 anti-fluore 99.8 1.1E-17 3.9E-22 121.6 14.6 152 80-231 21-252 (268)
231 3rbs_A Myomesin-1; immunoglobu 99.8 1.5E-17 5E-22 116.3 14.4 143 12-159 3-203 (207)
232 1za6_B IGG heavy chain; immuno 99.8 3.7E-18 1.3E-22 128.6 12.1 149 81-231 7-201 (344)
233 1mju_H Immunoglobulin MS6-12; 99.8 3.7E-18 1.3E-22 121.2 11.4 150 81-231 7-201 (227)
234 1ugn_A LIR1, leukocyte immunog 99.8 2.1E-17 7E-22 114.8 15.0 135 10-150 3-181 (198)
235 3m8o_H Immunoglobulin A1 heavy 99.8 1.2E-17 4E-22 118.1 13.8 148 82-231 8-207 (221)
236 2oz4_A Intercellular adhesion 99.8 1.4E-17 4.9E-22 120.8 14.5 138 85-231 14-162 (265)
237 1vca_A VCAM-D1,2, human vascul 99.8 7.3E-18 2.5E-22 117.5 12.4 150 15-166 3-200 (202)
238 2gki_A Nuclease; anti-DNA anti 99.8 4.9E-18 1.7E-22 125.0 12.1 151 81-231 29-255 (291)
239 1pz5_B Heavy chain of FAB (SYA 99.8 1E-17 3.5E-22 118.3 13.3 149 82-231 8-205 (220)
240 2r15_A Myomesin-1; sarcomeric 99.8 2.8E-17 9.7E-22 115.2 15.4 138 25-163 14-210 (212)
241 2w59_A IGY FCU3-4; immunoglobu 99.8 9.1E-19 3.1E-23 124.6 7.8 151 80-231 19-212 (231)
242 3b5h_A Cervical EMMPRIN, HAB18 99.8 9.3E-17 3.2E-21 110.1 17.7 138 23-162 8-182 (184)
243 1i1c_A IGG2A, IG gamma-2A chai 99.8 1E-18 3.5E-23 124.9 8.0 146 86-231 29-206 (239)
244 1l6x_A Immunoglobulin gamma-1 99.8 2.2E-18 7.5E-23 120.6 9.5 145 87-231 16-192 (207)
245 4fa8_A Secreted protein BARF1; 99.8 3E-18 1E-22 119.3 9.9 129 22-151 2-191 (203)
246 4fom_A Poliovirus receptor-rel 99.8 5.4E-18 1.8E-22 125.7 11.7 149 83-231 8-192 (308)
247 2gi7_A GPVI protein; IG-like d 99.8 2E-17 6.9E-22 113.6 13.5 136 9-150 5-168 (184)
248 3qib_D 2B4 beta chain; IG doma 99.8 4.2E-17 1.4E-21 118.7 15.0 150 81-231 34-239 (270)
249 2x1w_L Vascular endothelial gr 99.8 3.3E-17 1.1E-21 115.1 13.9 146 20-167 14-211 (213)
250 2d3v_A Leukocyte immunoglobuli 99.8 2.5E-17 8.7E-22 114.2 13.1 134 10-149 3-179 (196)
251 1nbq_A JAM, junctional adhesio 99.8 7.6E-18 2.6E-22 117.8 10.6 148 12-161 4-207 (209)
252 1dee_B IGM RF 2A2; FAB-IBP com 99.7 4.6E-17 1.6E-21 115.2 14.0 150 82-231 8-211 (223)
253 3p2t_A Leukocyte immunoglobuli 99.7 5E-17 1.7E-21 112.7 13.4 135 10-150 3-179 (196)
254 2wbj_D OB TCR; transmembrane, 99.7 4.6E-17 1.6E-21 119.1 13.7 152 80-231 30-240 (279)
255 2ny1_B T-cell surface glycopro 99.7 1.1E-16 3.8E-21 109.8 14.7 133 21-165 3-181 (184)
256 3jz7_A MCAR, CAR, coxsackievir 99.7 9.5E-18 3.2E-22 117.7 9.4 143 20-164 7-213 (214)
257 4dkd_C Macrophage colony-stimu 99.7 7.5E-18 2.6E-22 123.8 9.1 149 73-231 4-164 (292)
258 3nl4_H Antigen binding fragmen 99.7 2.7E-17 9.2E-22 115.7 11.5 149 82-231 7-198 (215)
259 1oll_A NK receptor; immune sys 99.7 1.1E-16 3.8E-21 110.3 14.0 145 11-161 3-186 (188)
260 3bae_H WO2 IGG2A FAB fragment 99.7 1.8E-17 6.3E-22 117.7 10.2 149 82-231 8-210 (228)
261 2fbo_J V1V2;, variable region- 99.7 1.2E-16 4.1E-21 114.8 14.6 133 20-152 9-239 (250)
262 3fku_X Neutralizing antibody F 99.7 4.9E-17 1.7E-21 119.0 12.5 150 81-231 7-231 (280)
263 1uct_A Immunoglobulin alpha FC 99.7 5.1E-17 1.7E-21 114.5 12.0 150 9-163 6-198 (218)
264 1c5d_H Monoclonal antibody aga 99.7 5.5E-17 1.9E-21 114.2 12.1 149 82-231 8-200 (215)
265 1dn0_B IGM-kappa cold agglutin 99.7 2.4E-16 8.4E-21 112.1 15.1 149 83-231 9-211 (232)
266 3o3u_N Maltose-binding peripla 99.7 1.4E-16 4.9E-21 127.9 15.5 150 82-231 374-561 (581)
267 3to4_D NKT vbeta2 (mouse varia 99.7 2.3E-16 7.7E-21 113.8 14.7 151 81-231 8-214 (253)
268 1b6u_A KIR2DL3, P58 killer cel 99.7 9.3E-17 3.2E-21 115.8 12.6 182 10-200 5-238 (257)
269 2xqy_G A13-D6.3 monoclonal ant 99.7 1.2E-16 4.2E-21 115.6 13.1 150 81-231 13-209 (261)
270 3mj6_A Junctional adhesion mol 99.7 1E-16 3.6E-21 116.4 12.5 162 12-181 5-256 (268)
271 3liz_H 4C3 monoclonal antibody 99.7 1.9E-16 6.4E-21 114.2 12.9 148 82-231 8-204 (253)
272 1bec_A 14.3.D T cell antigen r 99.7 2.9E-16 9.9E-21 112.2 12.9 126 81-207 6-166 (238)
273 1oga_E TRBC1, T-cell receptor 99.7 1.1E-15 3.7E-20 110.2 15.7 126 80-206 9-167 (252)
274 3bn9_D E2 FAB heavy chain; ant 99.7 5.9E-17 2E-21 116.9 9.0 148 83-231 9-214 (257)
275 3mjg_X Beta-type platelet-deri 99.7 6E-16 2E-20 113.6 14.4 144 23-169 105-284 (289)
276 1p6f_A NKP46, natural cytotoxi 99.7 8E-16 2.7E-20 110.0 14.2 149 9-163 4-191 (242)
277 4frw_A Poliovirus receptor-rel 99.7 5.2E-16 1.8E-20 108.9 12.6 141 20-161 6-209 (218)
278 3mj8_L Stimulatory hamster ant 99.7 2.1E-16 7.2E-21 110.9 10.6 136 13-151 2-202 (213)
279 2aty_A Complement receptor chi 99.7 3.9E-16 1.3E-20 118.9 12.8 146 86-231 180-357 (376)
280 1hxm_B Gamma-delta T-cell rece 99.7 6.1E-16 2.1E-20 110.8 12.7 150 80-231 7-213 (242)
281 3pv7_A B7-H6, IG-like domain-c 99.7 8E-16 2.7E-20 110.5 13.2 148 12-161 2-224 (248)
282 4acp_A IG gamma-1 chain C regi 99.7 1.2E-16 4.2E-21 114.0 8.7 146 86-231 36-213 (240)
283 1sy6_A T-cell surface glycopro 99.7 6.8E-16 2.3E-20 107.6 12.3 130 25-160 15-201 (204)
284 2wqr_A IG epsilon chain C regi 99.7 2.6E-17 8.9E-22 122.9 4.7 141 90-231 25-198 (323)
285 3bp6_B Programmed cell death 1 99.7 3.5E-16 1.2E-20 108.9 9.7 139 20-162 9-192 (202)
286 3mtr_A N-CAM-1, NCAM-1, neural 99.7 3.8E-15 1.3E-19 104.7 14.5 148 80-230 24-192 (215)
287 1ypz_F T-cell receptor gamma c 99.7 1.7E-15 5.9E-20 107.6 12.7 150 80-231 7-211 (230)
288 3knb_B Obscurin-like protein 1 99.7 1.6E-15 5.3E-20 94.5 10.7 91 73-165 13-107 (107)
289 4f80_A Butyrophilin subfamily 99.7 1.2E-15 4.2E-20 108.0 11.2 142 20-163 11-213 (226)
290 3nl4_L Antigen binding fragmen 99.6 3E-15 1E-19 105.0 12.2 132 13-146 2-198 (213)
291 1nqb_A Single-chain antibody f 99.6 7.6E-15 2.6E-19 105.9 13.9 143 20-163 7-233 (256)
292 2ghw_B Anti-SARS SCFV antibody 99.6 1.3E-14 4.4E-19 104.1 14.7 130 20-149 9-228 (247)
293 2p1y_A Bispecific alpha/beta T 99.6 5.5E-15 1.9E-19 105.4 12.7 133 15-149 3-222 (238)
294 4i0k_A CD276 antigen; immunogl 99.6 5.5E-15 1.9E-19 104.3 12.5 147 20-169 2-212 (222)
295 3auv_A SC-DSFV derived from th 99.6 9.7E-15 3.3E-19 106.6 14.1 136 12-148 12-235 (276)
296 1nkr_A P58-CL42 KIR; inhibitor 99.6 9E-15 3.1E-19 101.7 13.3 132 9-148 5-183 (201)
297 3d9a_L Light chain of hyhel10 99.6 3.6E-15 1.2E-19 104.5 11.2 131 20-151 8-202 (213)
298 3sbw_C Programmed cell death 1 99.6 1.6E-14 5.5E-19 101.8 14.0 145 20-166 8-214 (222)
299 3esu_F Antibody 14B7* light ch 99.6 1.7E-14 6E-19 103.6 14.3 134 13-147 5-231 (250)
300 3r06_A Anti-mouse CD3epsilon a 99.6 7E-15 2.4E-19 103.1 11.9 136 13-150 2-201 (213)
301 3shs_A HOC head outer capsid p 99.6 8.1E-13 2.8E-17 93.1 21.8 212 12-231 2-278 (304)
302 3uzq_A Anti-dengue MAB 4E11; d 99.6 1E-14 3.5E-19 105.1 12.5 146 20-166 8-247 (253)
303 1ow0_A IG alpha-1 chain C regi 99.6 6.8E-17 2.3E-21 113.6 1.0 125 80-206 10-151 (214)
304 2pet_A Lutheran blood group gl 99.6 2.6E-15 9E-20 106.5 9.2 130 19-148 6-211 (231)
305 3gkz_A Anti-methamphetamine si 99.6 1.2E-14 4E-19 105.0 12.7 154 10-163 5-249 (257)
306 2zg1_A Sialic acid-binding IG- 99.6 1.4E-14 4.8E-19 101.6 12.6 124 20-149 7-200 (214)
307 1lk3_L 9D7 light chain; antige 99.6 1.2E-14 4E-19 101.8 11.7 130 20-150 7-200 (210)
308 3u2s_H PG9 heavy chain; greek 99.6 2.1E-14 7.2E-19 103.1 13.3 150 81-231 6-222 (248)
309 3tv3_H PGT128 heavy chain, IG 99.6 1.4E-14 4.7E-19 103.5 12.2 149 82-231 8-221 (239)
310 1jbj_A CD3 epsilon and gamma e 99.6 1.4E-14 4.7E-19 99.5 11.8 123 21-151 7-178 (186)
311 3qhz_H Human monoclonal antibo 99.6 1E-14 3.5E-19 103.7 11.3 147 84-231 10-213 (232)
312 3s96_B 3B5H10 FAB light chain; 99.6 8.2E-15 2.8E-19 103.1 10.5 136 13-151 2-209 (218)
313 3umt_A SCFV heavy chain and li 99.6 3.8E-14 1.3E-18 102.3 13.7 143 20-163 9-245 (256)
314 2c1o_A IGK-C protein; FAB frag 99.6 7E-15 2.4E-19 106.0 9.3 141 9-151 35-244 (254)
315 3sob_L Antibody light chain; b 99.6 2E-14 7E-19 102.3 11.5 138 12-151 24-225 (237)
316 1ypz_E T cell receptor delta, 99.6 5E-14 1.7E-18 98.4 13.2 147 80-231 7-193 (207)
317 1iam_A ICAM-1, CD54, intercell 99.6 2.3E-13 7.9E-18 92.3 15.6 144 81-231 6-162 (185)
318 3juy_B 3B3 single chain varian 99.6 5.6E-14 1.9E-18 101.4 13.4 139 11-150 5-244 (256)
319 2cqv_A MLCK, myosin light chai 99.6 6.9E-14 2.4E-18 88.2 12.3 93 72-166 6-102 (114)
320 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 4E-14 1.4E-18 102.1 12.2 135 13-150 4-234 (256)
321 3knb_B Obscurin-like protein 1 99.6 1.6E-14 5.5E-19 89.8 8.7 69 163-231 12-89 (107)
322 2znx_A SCFV; fluorotryptohpan, 99.6 3.8E-14 1.3E-18 101.4 11.7 133 14-148 3-222 (242)
323 1f3r_B FV antibody fragment; I 99.6 1.5E-14 5.2E-19 104.4 9.4 69 81-149 146-232 (257)
324 4dzb_B Vbeta2 (MAIT T cell rec 99.6 2.4E-14 8.1E-19 102.7 10.3 135 15-150 4-219 (246)
325 3knb_A Titin; IG-like, titin, 99.6 3.9E-14 1.3E-18 87.0 9.6 88 73-162 5-98 (100)
326 3tv3_L PGT128 light chain, IG 99.6 1.8E-14 6.2E-19 100.8 9.1 127 22-151 9-200 (211)
327 3n9g_H FAB fragment of MAB CR4 99.6 5.5E-14 1.9E-18 99.8 11.7 146 83-231 9-209 (230)
328 1moe_A Anti-CEA MAB T84.66; an 99.6 9.6E-14 3.3E-18 99.1 12.8 132 15-147 4-219 (240)
329 3knb_A Titin; IG-like, titin, 99.5 2.5E-14 8.5E-19 87.9 8.3 68 164-231 5-83 (100)
330 1fhg_A Telokin; immunoglobulin 99.5 7.3E-14 2.5E-18 92.9 11.2 104 66-171 34-142 (154)
331 3omz_A Human vdelta1 gamma del 99.5 5.8E-14 2E-18 101.5 11.5 135 12-147 2-230 (259)
332 3nfj_J T cell receptor beta ch 99.5 4.4E-14 1.5E-18 101.2 10.5 131 20-150 8-218 (245)
333 3ux9_B SCFV antibody; five hel 99.5 6.1E-14 2.1E-18 101.1 11.3 129 20-149 9-236 (256)
334 3kvq_A Vascular endothelial gr 99.5 6.9E-14 2.3E-18 87.3 10.0 99 66-166 3-103 (108)
335 1hng_A CD2; T lymphocyte adhes 99.5 2.3E-14 8E-19 97.5 8.3 118 21-151 4-165 (176)
336 3qp3_A Titin; I-SET IG-like, s 99.5 1E-13 3.6E-18 85.7 10.5 94 68-163 3-100 (103)
337 3shs_A HOC head outer capsid p 99.5 7.5E-13 2.5E-17 93.3 15.7 143 81-231 9-165 (304)
338 2if7_A SLAM family member 6; N 99.5 3E-13 1E-17 93.4 13.4 125 20-151 5-181 (193)
339 1svz_A Immunoglobulin;, single 99.5 1.6E-13 5.6E-18 98.3 12.4 132 15-148 4-228 (247)
340 1nfd_E H57 FAB; complex (immun 99.5 7E-15 2.4E-19 103.0 5.0 131 20-151 6-201 (212)
341 3mlr_H Human monoclonal anti-H 99.5 1E-13 3.5E-18 98.2 10.9 148 83-231 9-210 (226)
342 2v5y_A Receptor-type tyrosine- 99.5 1.6E-12 5.5E-17 107.1 19.6 172 27-201 90-303 (731)
343 2edj_A Roundabout homolog 2; K 99.5 2.8E-13 9.4E-18 83.3 11.5 91 72-164 7-99 (100)
344 1q0x_L FAB 9B1, light chain; a 99.5 1.2E-13 4.3E-18 96.6 10.9 130 20-150 7-203 (212)
345 4fmk_A Poliovirus receptor-rel 99.5 1.8E-13 6E-18 96.3 11.7 142 20-162 8-218 (225)
346 3bkj_L WO2 IGG2A FAB fragment 99.5 4.5E-14 1.5E-18 101.6 8.7 138 12-151 34-240 (252)
347 1qok_A MFE-23 recombinant anti 99.5 6E-13 2.1E-17 97.4 14.5 142 20-162 33-267 (282)
348 2xzc_L FAB A.17 light chain; i 99.5 2.5E-13 8.4E-18 95.4 11.8 131 20-151 7-204 (216)
349 2ckn_A Basic fibroblast growth 99.5 2.2E-13 7.7E-18 82.9 10.1 81 79-161 14-94 (95)
350 3irg_B Obscurin-like protein 1 99.5 2E-13 7E-18 84.9 10.1 92 72-165 12-107 (107)
351 2rgs_A I, IG gamma-2B heavy ch 99.5 7.6E-14 2.6E-18 98.3 9.1 139 10-150 7-204 (218)
352 2vol_A Murine IGG FC; FC, zinc 99.5 1.7E-13 5.9E-18 95.6 10.6 137 13-150 2-196 (207)
353 2e7c_A Myosin-binding protein 99.5 3.4E-13 1.2E-17 85.5 11.0 93 72-165 20-117 (118)
354 3eow_R Poliovirus receptor; im 99.5 5.9E-14 2E-18 99.0 8.1 130 20-151 6-201 (221)
355 2xot_A Amphoterin-induced prot 99.5 1.9E-13 6.6E-18 103.5 11.3 104 81-197 253-360 (361)
356 3bqu_C 3H6 FAB light chain; be 99.5 2.1E-14 7.2E-19 102.1 5.7 137 11-149 22-222 (233)
357 1g1c_A Immunoglobulin-like dom 99.5 3.5E-13 1.2E-17 82.6 10.5 88 73-162 5-97 (99)
358 4ei6_B Vbeta16 XV19 type II na 99.5 3E-13 1E-17 96.8 11.8 135 13-149 3-217 (245)
359 1c1e_H Catalytic antibody 1E9 99.5 1.4E-13 4.8E-18 96.9 9.9 130 20-151 7-209 (219)
360 3iu4_H CHP3 FAB heavy chain; a 99.5 1.2E-13 4E-18 100.0 9.5 146 83-231 9-208 (263)
361 3sob_H Antibody heavy chain, l 99.5 2.1E-13 7.3E-18 98.3 10.7 146 83-231 32-235 (256)
362 2gjj_A A21 single-chain antibo 99.5 5E-13 1.7E-17 96.8 12.6 136 11-148 4-239 (264)
363 1pz5_B Heavy chain of FAB (SYA 99.5 1.9E-13 6.4E-18 96.3 10.0 130 20-151 7-210 (220)
364 1q9r_B S25-2 FAB (IGG1K) heavy 99.5 1.1E-13 3.9E-18 97.6 8.9 130 20-151 7-212 (222)
365 1wit_A Twitchin 18TH IGSF modu 99.5 4.6E-13 1.6E-17 81.1 10.4 87 73-161 2-92 (93)
366 3bfo_A Mucosa-associated lymph 99.5 1.8E-13 6E-18 82.6 8.3 68 164-231 3-70 (91)
367 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 7.4E-13 2.5E-17 96.1 13.1 136 11-148 14-254 (268)
368 1hxm_A Gamma-delta T-cell rece 99.5 1.8E-12 6.1E-17 91.8 14.6 142 80-231 7-194 (229)
369 2yr3_A Myosin light chain kina 99.5 2.8E-13 9.4E-18 83.1 9.0 91 69-161 7-98 (99)
370 2gki_A Nuclease; anti-DNA anti 99.5 1.2E-12 4E-17 96.3 13.9 130 20-149 29-258 (291)
371 1g1c_A Immunoglobulin-like dom 99.5 2.7E-13 9.4E-18 83.1 8.7 69 163-231 4-82 (99)
372 3puc_A Titin; I-SET IG-like do 99.5 8.1E-13 2.8E-17 80.9 10.9 88 73-162 6-97 (99)
373 1mju_H Immunoglobulin MS6-12; 99.5 3.7E-13 1.3E-17 95.3 10.5 130 20-151 7-206 (227)
374 3pl6_D MBP peptide / T-cell re 99.5 3.7E-13 1.3E-17 97.7 10.7 137 12-150 26-240 (268)
375 2kdg_A Myotilin; immonoglobuli 99.5 1.6E-12 5.4E-17 79.8 11.9 83 80-163 11-98 (100)
376 2kkq_A Myotilin; unknown funct 99.5 6.6E-13 2.3E-17 83.9 10.3 93 72-166 14-112 (116)
377 1gsm_A Madcam-1, mucosal addre 99.5 2.7E-12 9.1E-17 89.0 14.1 123 23-149 17-192 (210)
378 2wbj_D OB TCR; transmembrane, 99.5 4.5E-13 1.5E-17 97.9 10.7 139 11-150 23-244 (279)
379 2eo9_A Roundabout homolog 1; b 99.5 3.7E-13 1.3E-17 85.3 8.9 92 73-166 8-101 (118)
380 2yuz_A Myosin-binding protein 99.5 5.7E-13 1.9E-17 81.8 9.4 83 79-166 12-98 (100)
381 3q5y_A TCR N15 beta; IG, T cel 99.5 6.8E-13 2.3E-17 94.7 11.2 134 14-149 4-211 (240)
382 3f8u_B Tapasin; endoplasmic re 99.5 7.6E-12 2.6E-16 94.3 17.1 122 80-202 164-335 (401)
383 3qib_D 2B4 beta chain; IG doma 99.5 2.8E-13 9.4E-18 98.5 9.2 137 12-150 27-243 (270)
384 2cr6_A KIAA1556 protein, obscu 99.5 2.2E-13 7.7E-18 85.9 7.5 101 65-170 4-109 (115)
385 1dr9_A B7-1 (CD80), T lymphocy 99.5 2.6E-12 9E-17 89.1 13.6 126 21-151 2-190 (201)
386 1dee_B IGM RF 2A2; FAB-IBP com 99.5 2.1E-12 7.1E-17 91.2 13.2 66 86-151 138-216 (223)
387 1l6x_A Immunoglobulin gamma-1 99.5 1.8E-13 6E-18 95.6 7.6 137 12-150 1-196 (207)
388 3bn3_B ICAM-5, intercellular a 99.5 1.6E-12 5.4E-17 88.9 12.0 147 80-231 8-170 (196)
389 2fbj_H IGA-kappa J539 FAB (hea 99.5 1.4E-12 4.7E-17 92.0 12.2 132 20-153 7-212 (220)
390 2dm2_A Palladin; beta-sandwich 99.5 9.4E-13 3.2E-17 82.3 10.0 91 73-165 8-104 (110)
391 4hwu_A Fibroblast growth facto 99.4 1.5E-12 5.1E-17 79.1 10.6 83 80-165 7-89 (95)
392 3puc_A Titin; I-SET IG-like do 99.4 4.4E-13 1.5E-17 82.2 8.2 69 163-231 5-82 (99)
393 2cr3_A Basic fibroblast growth 99.4 6.2E-13 2.1E-17 81.5 8.7 80 82-163 11-90 (99)
394 3d9a_H Heavy chain of hyhel10 99.4 2.3E-13 7.8E-18 95.2 7.6 130 20-151 7-203 (210)
395 1waa_A Titin; metal binding pr 99.4 5.6E-13 1.9E-17 80.6 8.0 67 164-231 5-80 (93)
396 3qp3_A Titin; I-SET IG-like, s 99.4 5.1E-13 1.7E-17 82.5 7.9 69 163-231 7-84 (103)
397 2bk8_A Connectin, M1, titin he 99.4 3.7E-12 1.3E-16 77.7 11.6 82 80-162 7-93 (97)
398 1u2h_A APEG-1, aortic preferen 99.4 7.7E-13 2.6E-17 81.1 8.3 69 163-231 4-82 (99)
399 1wwb_X Protein (brain derived 99.4 1.5E-12 5.1E-17 80.4 9.6 77 88-165 15-100 (103)
400 2kdg_A Myotilin; immonoglobuli 99.4 2.7E-13 9.1E-18 83.3 6.1 69 163-231 4-82 (100)
401 3bfo_A Mucosa-associated lymph 99.4 1.9E-12 6.4E-17 78.0 9.8 78 80-162 9-86 (91)
402 2w59_A IGY FCU3-4; immunoglobu 99.4 4.1E-13 1.4E-17 95.4 7.9 142 9-151 9-217 (231)
403 1wwc_A Protein (NT-3 growth fa 99.4 7.7E-13 2.6E-17 83.9 8.3 94 67-165 2-103 (118)
404 2j6e_L IGM, FAB light chain; a 99.4 4.3E-13 1.5E-17 95.3 7.9 131 20-151 26-224 (234)
405 3irg_A Titin; IG-like, titin, 99.4 3.1E-12 1.1E-16 78.4 10.8 83 79-162 10-98 (100)
406 1nct_A Titin; cell adhesion, g 99.4 5.3E-13 1.8E-17 82.9 7.3 87 73-161 14-104 (106)
407 1u2h_A APEG-1, aortic preferen 99.4 4.2E-12 1.4E-16 77.7 11.2 88 73-162 5-97 (99)
408 3irg_B Obscurin-like protein 1 99.4 1.4E-12 4.8E-17 81.1 8.9 70 162-231 11-89 (107)
409 2dm3_A KIAA0992 protein, palla 99.4 6.1E-13 2.1E-17 83.2 7.3 92 72-165 8-104 (110)
410 1mq8_A ICAM-1, intercellular a 99.4 2.9E-12 1E-16 93.5 11.9 145 81-231 6-162 (291)
411 1dn0_B IGM-kappa cold agglutin 99.4 6.4E-12 2.2E-16 89.2 13.4 65 87-151 138-216 (232)
412 3s35_X Vascular endothelial gr 99.4 1.3E-12 4.4E-17 83.3 8.8 91 81-172 15-119 (122)
413 3m8o_H Immunoglobulin A1 heavy 99.4 1.1E-11 3.8E-16 87.3 14.4 64 87-151 136-212 (221)
414 2yr3_A Myosin light chain kina 99.4 3.4E-13 1.2E-17 82.7 5.8 71 161-231 8-84 (99)
415 2lu7_A Obscurin-like protein 1 99.4 2.6E-12 9E-17 76.0 9.2 75 82-162 4-82 (84)
416 1gl4_B Basement membrane-speci 99.4 7E-12 2.4E-16 76.6 11.5 86 74-161 10-96 (98)
417 3to4_D NKT vbeta2 (mouse varia 99.4 1.7E-12 5.9E-17 93.4 10.0 130 20-149 8-217 (253)
418 1he7_A High affinity nerve gro 99.4 1.6E-12 5.3E-17 82.4 8.5 77 88-165 14-101 (126)
419 1wit_A Twitchin 18TH IGSF modu 99.4 7E-13 2.4E-17 80.3 6.6 68 164-231 2-78 (93)
420 3kvq_A Vascular endothelial gr 99.4 3E-13 1E-17 84.3 4.8 75 157-231 3-84 (108)
421 2lu7_A Obscurin-like protein 1 99.4 9E-13 3.1E-17 78.0 6.5 59 172-231 4-71 (84)
422 2cqv_A MLCK, myosin light chai 99.4 1.2E-12 4.2E-17 82.3 7.5 69 163-231 6-83 (114)
423 2ens_A Advanced glycosylation 99.4 1.9E-13 6.6E-18 83.3 3.5 68 164-231 10-77 (96)
424 3u1s_H FAB PGT145 heavy chain; 99.4 4.1E-12 1.4E-16 92.1 11.1 146 83-231 32-249 (267)
425 3caf_A Fibroblast growth facto 99.4 3.9E-12 1.3E-16 78.0 9.4 79 82-161 16-99 (100)
426 3liz_H 4C3 monoclonal antibody 99.4 2.2E-12 7.4E-17 92.9 9.4 129 20-151 7-209 (253)
427 2v9t_A Roundabout homolog 1; s 99.4 3.1E-12 1.1E-16 80.9 9.0 93 71-164 7-110 (117)
428 3cx2_A Myosin-binding protein 99.4 5.9E-12 2E-16 78.4 10.1 82 80-162 10-107 (108)
429 2edh_A Obscurin; structural ge 99.4 6.3E-12 2.2E-16 78.9 10.3 94 65-166 10-108 (113)
430 2eny_A Obscurin; beta-sandwich 99.4 1.3E-12 4.4E-17 80.8 7.0 92 70-166 4-100 (104)
431 2v5y_A Receptor-type tyrosine- 99.4 3.9E-12 1.3E-16 104.9 11.7 136 90-231 92-243 (731)
432 1gxe_A Myosin binding protein 99.4 3.4E-12 1.2E-16 82.9 8.9 80 81-161 25-137 (139)
433 1op3_H FAB 2G12, heavy chain; 99.4 2.6E-12 8.9E-17 90.8 9.1 129 20-150 7-213 (225)
434 2dav_A SLOW MYBP-C, myosin-bin 99.4 1.8E-12 6E-17 82.2 7.2 84 79-163 12-111 (126)
435 3bae_H WO2 IGG2A FAB fragment 99.4 4E-12 1.4E-16 90.0 9.9 130 20-151 7-215 (228)
436 1x44_A Myosin-binding protein 99.4 4.7E-12 1.6E-16 78.1 9.1 87 73-165 6-98 (103)
437 1fhg_A Telokin; immunoglobulin 99.4 1.7E-12 5.8E-17 86.2 7.4 72 160-231 37-118 (154)
438 1hxm_B Gamma-delta T-cell rece 99.4 2E-11 6.9E-16 87.2 13.5 136 13-151 2-218 (242)
439 1i1c_A IGG2A, IG gamma-2A chai 99.4 1.3E-12 4.6E-17 93.1 7.3 139 11-150 14-210 (239)
440 1waa_A Titin; metal binding pr 99.4 1.3E-11 4.4E-16 74.6 10.6 67 80-147 11-81 (93)
441 3irg_A Titin; IG-like, titin, 99.4 3.3E-12 1.1E-16 78.3 7.9 68 164-231 5-83 (100)
442 2yuz_A Myosin-binding protein 99.4 1.3E-12 4.3E-17 80.2 5.9 66 164-231 7-81 (100)
443 3fku_X Neutralizing antibody F 99.4 6E-12 2.1E-16 91.9 10.3 66 84-149 149-234 (280)
444 2edj_A Roundabout homolog 2; K 99.4 2.9E-12 1E-16 78.6 7.4 69 163-231 7-82 (100)
445 1zxq_A ICAM-2, intercellular a 99.4 7E-11 2.4E-15 80.1 14.6 146 80-231 8-169 (192)
446 2bk8_A Connectin, M1, titin he 99.3 5.9E-12 2E-16 76.8 8.6 65 167-231 4-78 (97)
447 2cpc_A KIAA0657 protein; immun 99.3 1E-11 3.6E-16 77.9 9.8 82 84-171 23-108 (113)
448 2lvc_A Obscurin-like protein 1 99.3 1.2E-12 4.1E-17 78.7 5.0 56 175-231 17-81 (91)
449 3m45_A Cell adhesion molecule 99.3 9.9E-12 3.4E-16 77.3 9.4 84 80-165 12-108 (108)
450 3nl4_H Antigen binding fragmen 99.3 4.6E-12 1.6E-16 88.9 8.5 130 20-151 6-203 (215)
451 2kkq_A Myotilin; unknown funct 99.3 3.7E-12 1.3E-16 80.4 7.1 69 163-231 14-93 (116)
452 2cry_A KIN of IRRE-like protei 99.3 3E-13 1E-17 86.3 2.0 96 65-163 6-113 (122)
453 1nct_A Titin; cell adhesion, g 99.3 1.4E-12 4.8E-17 81.0 4.9 69 163-231 13-90 (106)
454 2ckn_A Basic fibroblast growth 99.3 1.9E-12 6.6E-17 78.7 5.5 67 164-231 9-80 (95)
455 2dm3_A KIAA0992 protein, palla 99.3 1.2E-12 4E-17 81.9 4.6 69 163-231 8-86 (110)
456 2edf_A Obscurin; beta-sandwich 99.3 5.8E-12 2E-16 77.7 7.7 86 73-165 8-97 (103)
457 2dru_A Chimera of CD48 antigen 99.3 3.4E-11 1.2E-15 82.1 12.1 118 20-151 6-170 (180)
458 2dm2_A Palladin; beta-sandwich 99.3 2E-12 6.9E-17 80.8 5.3 69 163-231 7-86 (110)
459 2e6q_A Obscurin-like protein 1 99.3 4.3E-11 1.5E-15 74.5 11.0 83 78-166 12-108 (112)
460 2edn_A Myosin-binding protein 99.3 2.9E-12 1E-16 80.3 5.7 85 78-163 16-116 (118)
461 2yuv_A Myosin-binding protein 99.3 3.2E-11 1.1E-15 73.9 10.1 87 73-165 7-97 (100)
462 4acp_A IG gamma-1 chain C regi 99.3 1.5E-11 5.1E-16 87.6 9.8 138 11-149 21-216 (240)
463 2e7c_A Myosin-binding protein 99.3 8.8E-12 3E-16 78.9 7.6 69 163-231 20-99 (118)
464 2xqy_G A13-D6.3 monoclonal ant 99.3 2.6E-11 8.8E-16 87.6 10.9 129 20-150 13-213 (261)
465 1iam_A ICAM-1, CD54, intercell 99.3 1.4E-10 4.7E-15 78.7 13.7 131 20-150 6-166 (185)
466 2ens_A Advanced glycosylation 99.3 4.3E-12 1.5E-16 77.3 5.6 77 80-161 16-93 (96)
467 2edf_A Obscurin; beta-sandwich 99.3 4.4E-12 1.5E-16 78.3 5.7 68 163-231 7-83 (103)
468 3rbg_A Cytotoxic and regulator 99.3 2.4E-11 8.2E-16 77.6 9.3 86 80-167 7-105 (124)
469 2v9t_A Roundabout homolog 1; s 99.3 4.6E-12 1.6E-16 80.1 5.9 70 162-231 7-92 (117)
470 2edk_A Myosin-binding protein 99.3 3.9E-12 1.3E-16 78.2 5.3 67 80-147 14-88 (101)
471 3caf_A Fibroblast growth facto 99.3 5E-12 1.7E-16 77.5 5.7 60 172-231 16-85 (100)
472 3qr2_A Basigin; CD147, EMMPRIN 99.3 6.7E-12 2.3E-16 81.7 6.6 71 161-231 18-110 (137)
473 2edk_A Myosin-binding protein 99.3 2.8E-12 9.6E-17 78.9 4.6 67 164-231 8-87 (101)
474 3r08_E T-cell surface glycopro 99.3 2.4E-12 8.3E-17 74.9 3.9 59 171-231 6-65 (82)
475 1hnf_A CD2; T lymphocyte adhes 99.3 5.9E-11 2E-15 80.9 11.4 119 20-151 6-170 (182)
476 2e6p_A Obscurin-like protein 1 99.3 1.7E-11 6E-16 75.7 8.0 76 84-165 20-99 (104)
477 2e6p_A Obscurin-like protein 1 99.3 6.5E-12 2.2E-16 77.6 6.0 67 164-231 7-85 (104)
478 3so5_A LIG-3, leucine-rich rep 99.3 2.6E-11 8.9E-16 75.7 8.8 70 162-231 8-96 (112)
479 1x44_A Myosin-binding protein 99.3 6E-12 2.1E-16 77.6 5.7 64 167-231 10-84 (103)
480 1ypz_F T-cell receptor gamma c 99.3 1.9E-11 6.6E-16 86.6 9.1 62 88-151 144-216 (230)
481 1bec_A 14.3.D T cell antigen r 99.3 4.7E-11 1.6E-15 85.1 11.0 129 20-149 6-210 (238)
482 3bn9_D E2 FAB heavy chain; ant 99.3 1.5E-11 5.3E-16 88.5 8.5 63 86-149 145-217 (257)
483 1ntl_A CRRY-IG; immunology, co 99.3 7.2E-11 2.5E-15 94.2 13.1 146 86-231 355-532 (551)
484 3o3u_N Maltose-binding peripla 99.3 3.9E-11 1.3E-15 96.4 11.6 131 20-150 373-565 (581)
485 3cx2_A Myosin-binding protein 99.3 9.6E-12 3.3E-16 77.4 6.3 68 164-231 4-92 (108)
486 2cr6_A KIAA1556 protein, obscu 99.3 2.9E-12 9.9E-17 80.8 3.9 72 159-230 7-89 (115)
487 2k1m_A Myosin-binding protein 99.3 7.2E-12 2.5E-16 76.1 5.5 65 165-230 9-82 (95)
488 3bn3_B ICAM-5, intercellular a 99.3 4.5E-11 1.6E-15 81.7 10.0 136 14-150 4-174 (196)
489 2yuv_A Myosin-binding protein 99.3 1.5E-11 5.3E-16 75.4 7.1 66 164-230 7-82 (100)
490 2dlt_A Myosin binding protein 99.3 7E-12 2.4E-16 77.8 5.5 67 164-231 8-83 (106)
491 2lvc_A Obscurin-like protein 1 99.3 2.6E-11 8.8E-16 72.8 7.7 63 85-148 17-83 (91)
492 3mtr_A N-CAM-1, NCAM-1, neural 99.3 9.4E-11 3.2E-15 82.1 11.9 138 9-152 16-199 (215)
493 1wwb_X Protein (brain derived 99.3 1.7E-11 5.8E-16 75.6 6.9 55 177-231 14-82 (103)
494 1ccz_A Protein (CD58); LFA-3, 99.3 1E-10 3.5E-15 79.0 11.3 117 21-151 3-160 (171)
495 2edh_A Obscurin; structural ge 99.3 7.7E-12 2.6E-16 78.5 5.3 74 155-230 9-92 (113)
496 2eo9_A Roundabout homolog 1; b 99.3 3E-12 1E-16 81.1 3.3 69 163-231 7-82 (118)
497 2e7b_A Obscurin; IG-like domai 99.2 5E-11 1.7E-15 73.4 8.8 81 80-166 14-98 (103)
498 1pd6_A Cardiac MYBP-C;, myosin 99.2 1.3E-11 4.4E-16 76.2 6.0 67 164-231 15-92 (104)
499 1oga_E TRBC1, T-cell receptor 99.2 5.9E-11 2E-15 85.3 10.4 135 14-150 5-217 (252)
500 2dav_A SLOW MYBP-C, myosin-bin 99.2 8.2E-12 2.8E-16 79.1 5.1 67 165-231 8-95 (126)
No 1
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=4.3e-34 Score=210.09 Aligned_cols=221 Identities=21% Similarity=0.411 Sum_probs=181.3
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee---------------------------eeEEEEe
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL---------------------------GRLHLAI 61 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~---------------------------~~~~~~~ 61 (232)
+..||.|... +.++.+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|..
T Consensus 2 ~~~pP~~~~~-p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 80 (284)
T 2rik_A 2 AMAPPFFDLK-PVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYA 80 (284)
T ss_dssp CCCCCEEEEC-CCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CcCCCEEEcc-ccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEE
Confidence 3579999988 88999999999999999999899999999964332 3566655
Q ss_pred ee------ecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe----eCCeEEEC
Q psy15206 62 PY------TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF----TGSTLQIP 131 (232)
Q Consensus 62 ~~------~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~----~~~~l~i~ 131 (232)
.. ..+.|.|..+|.+.........+..|+.+.|.|.+.+.|.+.+.|++++..+........ ....|.|.
T Consensus 81 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 160 (284)
T 2rik_A 81 SNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMY 160 (284)
T ss_dssp EETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEEC
T ss_pred EECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEC
Confidence 22 166778888887766555556788999999999999999999999999988765544322 23579999
Q ss_pred CCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe-
Q psy15206 132 RITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY- 210 (232)
Q Consensus 132 ~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~- 210 (232)
++..+|.|.|+|.+.+..+. ....+.+.|..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+....+
T Consensus 161 ~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~ 239 (284)
T 2rik_A 161 NLSVEDSGDYTCEAHNAAGS-ASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKY 239 (284)
T ss_dssp SCCGGGCEEEEEEEECSSCE-EEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTE
T ss_pred CCCcccCEEEEEEEEcCCCc-eeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCE
Confidence 99999999999999998776 5677888898999887777777888999999999999999999999999998876544
Q ss_pred --------EEEEEeccccCCceEEEEecC
Q psy15206 211 --------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 211 --------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..|.+.++...|+|.|+|.|.
T Consensus 240 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 268 (284)
T 2rik_A 240 KIMSENFLTSIHILNVDSADIGEYQCKAS 268 (284)
T ss_dssp EEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEcCCEEEEEEcCCCcccCEEEEEEEE
Confidence 356677788899999999974
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=3e-32 Score=218.22 Aligned_cols=219 Identities=21% Similarity=0.416 Sum_probs=178.2
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee---------------------------eeEEEEeee
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL---------------------------GRLHLAIPY 63 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~---------------------------~~~~~~~~~ 63 (232)
.||.+... +.+..+.+|++++|.|.+.+.|++.++|+|++..+ |.|+|....
T Consensus 196 ~pp~~~~~-p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 274 (570)
T 3b43_A 196 VPPFFDLK-PVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 274 (570)
T ss_dssp CCCEEEEC-CCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEE
T ss_pred CCCccccC-CceeEecCCCeEEEEEEEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEEC
Confidence 47888777 77888999999999999999999999999965432 345555422
Q ss_pred ------ecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe----eCCeEEECCC
Q psy15206 64 ------TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF----TGSTLQIPRI 133 (232)
Q Consensus 64 ------~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~----~~~~l~i~~~ 133 (232)
....|.|..+|.+.........+.+|+.+.|.|.+.|.|.+.+.|++++..+........ ....|.|.++
T Consensus 275 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v 354 (570)
T 3b43_A 275 VAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNL 354 (570)
T ss_dssp TTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESC
T ss_pred CCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCC
Confidence 156778888887765444445677899999999999999999999999998765544332 1346999999
Q ss_pred CCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeE--
Q psy15206 134 TKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYH-- 211 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~-- 211 (232)
..+|.|.|+|.+.|..|. ......|.|..+|.+...+....+..|+++.|.|.+.|.|.|.+.|+|+|..+..+.++
T Consensus 355 ~~~D~G~Y~C~a~N~~g~-~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~ 433 (570)
T 3b43_A 355 SVEDSGDYTCEAHNAAGS-ASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKI 433 (570)
T ss_dssp CGGGCEEEEEEEEBTTBC-CEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEE
T ss_pred CcccCEEEEEEEEeCCCE-EEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEE
Confidence 999999999999998887 55677888999999888888888889999999999999999999999999988765544
Q ss_pred -------EEEEeccccCCceEEEEecC
Q psy15206 212 -------SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 212 -------~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|.+.++...|+|.|+|.|.
T Consensus 434 ~~~~~~~~L~i~~v~~~D~G~Y~C~A~ 460 (570)
T 3b43_A 434 MSENFLTSIHILNVDSADIGEYQCKAS 460 (570)
T ss_dssp EEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEcCCEEEEEECCCChhhCEEEEEEEE
Confidence 45566788899999999974
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=5e-32 Score=216.96 Aligned_cols=224 Identities=20% Similarity=0.413 Sum_probs=181.0
Q ss_pred CCcccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee---------------------------eeEE
Q psy15206 6 ESQVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL---------------------------GRLH 58 (232)
Q Consensus 6 ~~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~---------------------------~~~~ 58 (232)
.+.|..+|.+.........+.+|+.+.|.|.+.+.|.+.+.|+|++..+ |.|+
T Consensus 284 ~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 363 (570)
T 3b43_A 284 QLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYT 363 (570)
T ss_dssp EECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred EEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEE
Confidence 4677889998876344566899999999999999999999999965332 3555
Q ss_pred EEeeee------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee--C--CeE
Q psy15206 59 LAIPYT------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT--G--STL 128 (232)
Q Consensus 59 ~~~~~~------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~--~--~~l 128 (232)
|..... ...|.|..+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....+.... + ..|
T Consensus 364 C~a~N~~g~~~~~~~l~V~~~P~~~~-~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L 442 (570)
T 3b43_A 364 CEAHNAAGSASSSTSLKVKEPPVFRK-KPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSI 442 (570)
T ss_dssp EEEEBTTBCCEEEEEECEECCCEECS-CCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEE
T ss_pred EEEEeCCCEEEEEEEEEecCCCeeec-CCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEE
Confidence 554222 56778888887764 455667788999999999999999999999999887655444322 1 378
Q ss_pred EECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEec-C
Q psy15206 129 QIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVV-N 207 (232)
Q Consensus 129 ~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~-~ 207 (232)
.|.++..+|.|.|.|.+.|..|. ......+.|..+|.+...+.+..+..|+.+.|.|.+.|.|.+.+.|+|+|..+. .
T Consensus 443 ~i~~v~~~D~G~Y~C~A~N~~G~-~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~ 521 (570)
T 3b43_A 443 HILNVDSADIGEYQCKASNDVGS-DTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRE 521 (570)
T ss_dssp EECSCCGGGCEEEEEEEECSSCE-EEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCC
T ss_pred EECCCChhhCEEEEEEEEECCCe-EEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccC
Confidence 99999999999999999999887 556778888999999888888888899999999999999999999999986543 2
Q ss_pred ---------CCeEEEEEeccccCCceEEEEecC
Q psy15206 208 ---------DEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 208 ---------~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.....|.+.++...|+|.|.|.|.
T Consensus 522 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 554 (570)
T 3b43_A 522 SDNIWISYSENIATLQFSRAEPANAGKYTCQIK 554 (570)
T ss_dssp TTTEEECCCSSEEEEEESSCCTTCCEEEEEEEE
T ss_pred CCeEEEEECCCEEEEEECcCCHHHCEEEEEEEE
Confidence 223567788888999999999874
No 4
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-31 Score=198.82 Aligned_cols=219 Identities=21% Similarity=0.397 Sum_probs=165.3
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcE-----------------------------eeeeEEE
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK-----------------------------RLGRLHL 59 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~-----------------------------~~~~~~~ 59 (232)
...+|.|... +.+..+.+|++++|.|.+.+.|.+.+.|++++. +.|.|+|
T Consensus 3 ~~~~P~~~~~-p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C 81 (304)
T 2yd9_A 3 GEEPPRFIKE-PKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYEC 81 (304)
T ss_dssp -CCCCEEEEC-CCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEE
T ss_pred CccCCeeeec-CCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEE
Confidence 4579999988 889999999999999999999999999999432 2245666
Q ss_pred Eeeee------cCceeecCC-------cEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC---cE-E
Q psy15206 60 AIPYT------SPEAQVDTP-------PVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG---QT-I 122 (232)
Q Consensus 60 ~~~~~------~~~l~v~~~-------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~---~~-~ 122 (232)
..... .+.|.|..+ |.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... +. .
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~-~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~ 160 (304)
T 2yd9_A 82 VAQNSVGEITVHAKLTVLREDQLPSGFPNIDM-GPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQ 160 (304)
T ss_dssp EEECSSCEECCEEEEEEECGGGCCTTCCEEEE-CCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEE
T ss_pred EEECCCCeEEEEEEEEEeccccCCCCCCeeec-CCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEe
Confidence 55322 445555543 33333 4556678889999999999999999999999998764321 22 3
Q ss_pred eeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEE---eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEe
Q psy15206 123 FTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVE---FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWA 199 (232)
Q Consensus 123 ~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~ 199 (232)
..++.|.|.++..+|.|.|+|.+.|..+........+.|. .+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+
T Consensus 161 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~ 240 (304)
T 2yd9_A 161 LRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWM 240 (304)
T ss_dssp CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEE
T ss_pred CCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEE
Confidence 3456899999999999999999999876533332444443 5777777777777889999999999999999999999
Q ss_pred eCCEEecCCC-----eEEEEEeccccCCceEEEEecC
Q psy15206 200 KDGEIVVNDE-----YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 200 ~~g~~~~~~~-----~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
++|..+.... ...|.+.+. .|+|.|+|.|.
T Consensus 241 ~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~ 275 (304)
T 2yd9_A 241 QGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAM 275 (304)
T ss_dssp ETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEEEE
T ss_pred ECCEECCCcccccCCcEEEEEccc--ccCEEEEEEEE
Confidence 9999886432 345555554 68999999974
No 5
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=4.3e-31 Score=194.67 Aligned_cols=218 Identities=22% Similarity=0.388 Sum_probs=168.4
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCC-CCeEEEEe-CcEee-----------------------------eeEEEE
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHP-IPTISWRR-NFKRL-----------------------------GRLHLA 60 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p-~~~~~W~~-~~~~~-----------------------------~~~~~~ 60 (232)
||.|... |.+..+.+|++++|.|.+.+.+ .+.+.|++ ++..+ |.|.|.
T Consensus 2 ~~~v~~~-p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (291)
T 1qz1_A 2 VLQVDIV-PSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV 80 (291)
T ss_dssp CCCEEEE-SSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CcceEec-CCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEE
Confidence 5677777 8888999999999999999876 68999998 43211 355555
Q ss_pred eeee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC--c-EEeeCCeEEE
Q psy15206 61 IPYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG--Q-TIFTGSTLQI 130 (232)
Q Consensus 61 ~~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~--~-~~~~~~~l~i 130 (232)
.... .+.|.+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... + ....++.|.|
T Consensus 81 ~~n~~g~~~~~~~~l~v~~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i 159 (291)
T 1qz1_A 81 VTAEDGTQSEATVNVKIFQKLMFKN-APTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQI 159 (291)
T ss_dssp EECTTSCEEEEEEEEEEECCSEEEE-CCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEE
T ss_pred EEcCCCCeeEEEEEEEeeccccccC-CCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEE
Confidence 4221 45566666666554 4556778899999999999999989999999998764322 2 2334668999
Q ss_pred CCCCCCCCeEEEEEeEeCC-CCceeeEEEEEEEeccEEEeccc--eeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC
Q psy15206 131 PRITKEDRGAYYCVAQNGI-GRGARRKIEVKVEFAPIVTVQST--RIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN 207 (232)
Q Consensus 131 ~~~~~~~~g~y~C~~~~~~-~~~~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~ 207 (232)
.++...|.|.|+|.+.+.. +......+.+.+..+|.+..... ...+..|+.+.|.|.+.|.|.+.+.|+++|..+..
T Consensus 160 ~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~ 239 (291)
T 1qz1_A 160 RGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIEN 239 (291)
T ss_dssp TTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred ccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcC
Confidence 9999999999999999864 33344667778888888776543 44667899999999999999999999999988765
Q ss_pred CC-----------eEEEEEeccccCCceEEEEecC
Q psy15206 208 DE-----------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 208 ~~-----------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.. ...|.+.++..+|+|.|+|.|.
T Consensus 240 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 274 (291)
T 1qz1_A 240 EEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAE 274 (291)
T ss_dssp C--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEE
Confidence 43 2367788888899999999873
No 6
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-30 Score=200.26 Aligned_cols=223 Identities=26% Similarity=0.513 Sum_probs=176.8
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe---------------------------eeeEEE
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR---------------------------LGRLHL 59 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~---------------------------~~~~~~ 59 (232)
+.+..+|.+... +.+..+.+|++++|.|.+.+.|.+.+.|++++.. .|.|.|
T Consensus 116 l~v~~p~~~~~~-~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 194 (403)
T 3laf_A 116 VMVAGPLRFLSQ-TESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRC 194 (403)
T ss_dssp EEECCCCEECSC-CCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEE
T ss_pred EEecCCCccccC-CCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEE
Confidence 445668888776 7788999999999999999989999999995432 247777
Q ss_pred Eeeee-------cCceeecCCcE-----EecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCc--EEeeC
Q psy15206 60 AIPYT-------SPEAQVDTPPV-----ILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQ--TIFTG 125 (232)
Q Consensus 60 ~~~~~-------~~~l~v~~~p~-----~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~--~~~~~ 125 (232)
..... ...+.+...|. .....+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ....+
T Consensus 195 ~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~ 274 (403)
T 3laf_A 195 SARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGG 274 (403)
T ss_dssp EEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETT
T ss_pred EEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCc
Confidence 76332 34455544432 122245556778999999999999999999999999987654322 23345
Q ss_pred CeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEe
Q psy15206 126 STLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIV 205 (232)
Q Consensus 126 ~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~ 205 (232)
+.|.|.++..+|.|.|+|.+.|..+. ....+.+.|..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+
T Consensus 275 ~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~ 353 (403)
T 3laf_A 275 SNLLISNVTDDDSGTYTCVVTYKNEN-ISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVV 353 (403)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEEC
T ss_pred cEEEEeCCCHHHCEEEEEEEEcCCCc-eEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEEC
Confidence 78999999999999999999998776 66778888989999888888888889999999999999999999999999987
Q ss_pred cCCCeE------EEEEeccccCCceEEEEecC
Q psy15206 206 VNDEYH------SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 206 ~~~~~~------~~~~~~~~~~d~g~Y~C~~~ 231 (232)
....++ .+.+..+..+|+|.|+|.|.
T Consensus 354 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 385 (403)
T 3laf_A 354 IPSDYFQIVGGSNLRILGVVKSDEGFYQCVAE 385 (403)
T ss_dssp CCSSSEEEETTTEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCcEEEecCccEEEeccccccCEEEEEEEE
Confidence 654433 46667788899999999874
No 7
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.98 E-value=2e-30 Score=198.48 Aligned_cols=221 Identities=17% Similarity=0.279 Sum_probs=171.4
Q ss_pred cccCCCeeecCCCcceEeecCCeEEEEEEecCCCC---CeEEEEeCcEee------------------------------
Q psy15206 8 QVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPI---PTISWRRNFKRL------------------------------ 54 (232)
Q Consensus 8 ~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~---~~~~W~~~~~~~------------------------------ 54 (232)
.+..+|.+... +.+..+.+|++++|.|.+.+.+. +.+.|++++...
T Consensus 99 ~v~~~p~~~~~-~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~ 177 (388)
T 2v5m_A 99 RAVVAQYYEAD-VNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGY 177 (388)
T ss_dssp EEECCCCCCCB-CCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGG
T ss_pred EEccccccccC-ccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccC
Confidence 34557777766 67788999999999999987543 789999954321
Q ss_pred eeEEEEeeee----------cCceeecCC-----cEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeee----
Q psy15206 55 GRLHLAIPYT----------SPEAQVDTP-----PVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAI---- 115 (232)
Q Consensus 55 ~~~~~~~~~~----------~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~---- 115 (232)
|.|+|..... ...|.+..+ |...........+.+|+.+.|.|.+.|.|.+.+.|++++...
T Consensus 178 G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~ 257 (388)
T 2v5m_A 178 KSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQ 257 (388)
T ss_dssp CCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEE
T ss_pred eeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccc
Confidence 6788876432 124555443 222222223456778999999999999999999999975332
Q ss_pred --CCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCC
Q psy15206 116 --LPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPH 193 (232)
Q Consensus 116 --~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 193 (232)
....+.....+.|.|.++..+|.|.|+|.+.|..|. ....+.+.|..+|.+...+....+..|+.+.|.|.+.|.|.
T Consensus 258 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~ 336 (388)
T 2v5m_A 258 AVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGG-ESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPI 336 (388)
T ss_dssp ECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCE-EEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECC
T ss_pred cccccCceecccCEEEECcCCHHHCeEEEEEEecCCCc-eeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccC
Confidence 223344455778999999999999999999998887 56778888988888888888888899999999999999999
Q ss_pred CeEEEeeCCEEecCCCeEEEEEeccccCCceEEEEecC
Q psy15206 194 PILYWAKDGEIVVNDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 194 ~~~~W~~~g~~~~~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.+.|+|+|..+.... ..|.+.++...|+|.|+|.|.
T Consensus 337 p~i~W~~~g~~i~~~~-~~L~i~~v~~~d~G~Y~C~a~ 373 (388)
T 2v5m_A 337 KTVSWMKDGKAIGHSE-SVLRIESVKKEDKGMYQCFVR 373 (388)
T ss_dssp CEEEEEETTEECSCCS-SEEEESSCCGGGCEEEEEEEE
T ss_pred CeEEEEECCEECccCC-CEEEEecCChhhCEEEEEEEE
Confidence 9999999999887543 467888888999999999874
No 8
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.98 E-value=1.6e-30 Score=191.65 Aligned_cols=219 Identities=18% Similarity=0.350 Sum_probs=164.1
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEe-CcEe---------------------------eeeEEEEe
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRR-NFKR---------------------------LGRLHLAI 61 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~-~~~~---------------------------~~~~~~~~ 61 (232)
..+|.++.. +.++.+.+|++++|.|.+.+.|. .+.|++ ++.. .|.|.|..
T Consensus 2 ~~~p~v~~~-~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 79 (291)
T 2wim_A 2 MALLQVTIS-LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQA 79 (291)
T ss_dssp -CCCEEEES-CSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCceEEEe-ccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEE
Confidence 358899988 88899999999999999998765 999998 3221 14666655
Q ss_pred eee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC--CCcE-EeeCCeEEEC
Q psy15206 62 PYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP--NGQT-IFTGSTLQIP 131 (232)
Q Consensus 62 ~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~--~~~~-~~~~~~l~i~ 131 (232)
... .+.|.+..++.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..+. ...++.|.|.
T Consensus 80 ~n~~g~~~~~~~~l~v~~~~~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~ 158 (291)
T 2wim_A 80 TDAKGQTQEATVVLEIYQKLTFRE-VVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQIL 158 (291)
T ss_dssp ECSSSCEEEEEEEEEEECCCBCCS-CCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEET
T ss_pred ecccCceEEEEEEEEecCCcceEe-CCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEE
Confidence 322 44556655554433 44556788999999999999989999999999877643 2222 2345689999
Q ss_pred CCCCCCCeEEEEEeEeCCCC-ceeeEEEEEEEeccEEEeccc--eeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC
Q psy15206 132 RITKEDRGAYYCVAQNGIGR-GARRKIEVKVEFAPIVTVQST--RIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND 208 (232)
Q Consensus 132 ~~~~~~~g~y~C~~~~~~~~-~~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~ 208 (232)
++...|.|.|+|.+.+..+. .....+.+.+..+|.+...+. ...+..|+.+.|.|.+.|.|.+.+.|+++|..+...
T Consensus 159 ~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 238 (291)
T 2wim_A 159 NINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN 238 (291)
T ss_dssp TCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCT
T ss_pred ecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCC
Confidence 99999999999999987643 334566777778887655443 345678999999999999999999999999987644
Q ss_pred C-------eEEEEEeccccCCceEEEEecC
Q psy15206 209 E-------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ~-------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
. ...|.+.++...|+|.|+|.|.
T Consensus 239 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 268 (291)
T 2wim_A 239 EKYILKGSNTELTVRNIINSDGGPYVCRAT 268 (291)
T ss_dssp TTEEECSTTCEEEEESCCSTTCEEEEEEEE
T ss_pred ccEEEcCCccEEEEeeCCcccCEEEEEEEE
Confidence 3 2457777888899999999974
No 9
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=201.52 Aligned_cols=216 Identities=14% Similarity=0.193 Sum_probs=157.4
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe-----------------------eeeEEEEeee
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR-----------------------LGRLHLAIPY 63 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~-----------------------~~~~~~~~~~ 63 (232)
+.|..+|.+... .+..+..|+.++|.|.+.|.|.+.|+|++++.. .|.|.|....
T Consensus 135 l~V~~~p~~~~~--~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N 212 (423)
T 3qs7_E 135 VSIRNTLLYTLR--RPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARN 212 (423)
T ss_dssp EEEC-----CEE--EEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEEC
T ss_pred EEEecCcccccc--CCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEc
Confidence 345556666433 334566789999999999999999999995321 2347777632
Q ss_pred e-------cCceeecCCcEEecCCCCceEeecCCcEEEEeeecc-CCCCeEEEEeCCeeeCCCCc----------EEeeC
Q psy15206 64 T-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIPTISWRRENNAILPNGQ----------TIFTG 125 (232)
Q Consensus 64 ~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~~~~~~~~~----------~~~~~ 125 (232)
. .+.|.|..+|.. .+....+.+|+.+.|.|.+.| .|.+.+.|++++..+..... .....
T Consensus 213 ~~G~~~~~~~~l~V~~~p~~---~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~ 289 (423)
T 3qs7_E 213 ELGRECTRLFTIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRI 289 (423)
T ss_dssp SSCEEEEECEEEESSSCCCS---STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEE
T ss_pred CCCCcceeeEEEEEecCCcc---CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEE
Confidence 2 345555554432 334567889999999999998 66789999999987643211 12223
Q ss_pred CeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEecc--ceeeeeccCeEEEEEEeecCCCCeEEEeeCCE
Q psy15206 126 STLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQS--TRIGQALHHDMDLDCHIEAYPHPILYWAKDGE 203 (232)
Q Consensus 126 ~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~ 203 (232)
+.|.|.++..+|+|.|+|.+.|. ....+.|.|..+|.+...+ ....+..|+++.|.|.+.|.|.|.|.|+|+|.
T Consensus 290 ~~L~I~~v~~~D~G~Y~C~A~N~----~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~ 365 (423)
T 3qs7_E 290 LFAFVSSVARNDTGYYTCSSSKH----PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRK 365 (423)
T ss_dssp EEEEESSCCTTTCEEEEEEETTE----EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTE
T ss_pred EEEEEeecCHHHCEEEEEEEecC----CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCE
Confidence 47999999999999999999887 5677888888888877655 34567789999999999999999999999999
Q ss_pred EecCC-----CeEEEEEeccccCCceEEEEecC
Q psy15206 204 IVVND-----EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 204 ~~~~~-----~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+..+ ..+.+.......+|+|.|+|.|.
T Consensus 366 ~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~ 398 (423)
T 3qs7_E 366 SFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAE 398 (423)
T ss_dssp EEECBCCBCSSSSEEEEECCCTTCCSCEEEEEE
T ss_pred ECCCccccccCCcEEEEEecccccCEEEEEEEE
Confidence 88654 35566445566799999999984
No 10
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.97 E-value=7.3e-30 Score=196.27 Aligned_cols=224 Identities=25% Similarity=0.430 Sum_probs=172.8
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEe-cCCCCCeEEEEeCcE-------------------------e-eeeEEE
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHA-EGHPIPTISWRRNFK-------------------------R-LGRLHL 59 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~-~~~p~~~~~W~~~~~-------------------------~-~~~~~~ 59 (232)
+.|..+|.+......+..+.+|++++|.|.+ .+.|.+.+.|++++. + .|.|.|
T Consensus 110 l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C 189 (404)
T 3p3y_A 110 LQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSC 189 (404)
T ss_dssp EEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEE
T ss_pred EEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEE
Confidence 4556667665543566889999999999999 678899999999431 1 257888
Q ss_pred Eeeee---------cCceeecCC-------cEEecCC--CCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcE
Q psy15206 60 AIPYT---------SPEAQVDTP-------PVILNNS--PQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQT 121 (232)
Q Consensus 60 ~~~~~---------~~~l~v~~~-------p~~~~~~--~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~ 121 (232)
..... .+.+.+... |.+.... .....+.+|+.+.|.|.+.+.|.+.+.|++++..+......
T Consensus 190 ~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~ 269 (404)
T 3p3y_A 190 NARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK 269 (404)
T ss_dssp EEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEE
T ss_pred EEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCccc
Confidence 77432 233444322 2211110 12345778999999999999999999999999887544432
Q ss_pred -EeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEee
Q psy15206 122 -IFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAK 200 (232)
Q Consensus 122 -~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~ 200 (232)
...++.|.|.++..+|.|.|+|.+.|..+. ....+.+.|..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++
T Consensus 270 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~ 348 (404)
T 3p3y_A 270 FENFNKALRITNVSEEDSGEYFCLASNKMGS-IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMV 348 (404)
T ss_dssp EEGGGTEEEESSCCGGGCEEEEEEEECSSCE-EEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEE
T ss_pred ccccCceEEEccCCHhHCEEEEEEEEeCCCc-EEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEE
Confidence 333678999999999999999999998877 667888999999998888888888999999999999999999999999
Q ss_pred CCEEecCCC--------eEEEEEeccccCCceEEEEecC
Q psy15206 201 DGEIVVNDE--------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 201 ~g~~~~~~~--------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|..+.... ...|.+.++..+|+|.|+|.|.
T Consensus 349 ~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 387 (404)
T 3p3y_A 349 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTS 387 (404)
T ss_dssp TTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEE
T ss_pred CCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEE
Confidence 999876432 1257778889999999999874
No 11
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.97 E-value=8.2e-30 Score=194.97 Aligned_cols=219 Identities=24% Similarity=0.399 Sum_probs=163.0
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEec-CCCCCeEEEEeCcEe-------------------------eeeEEEEeeeec
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAE-GHPIPTISWRRNFKR-------------------------LGRLHLAIPYTS 65 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~-~~p~~~~~W~~~~~~-------------------------~~~~~~~~~~~~ 65 (232)
.|.+...+...+.+.+|+.++|.|... +.+.+.+.|++++.. .|.|+|......
T Consensus 101 ~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (384)
T 3kld_A 101 LENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV 180 (384)
T ss_dssp ECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETT
T ss_pred ccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEeccc
Confidence 333333324567899999999999875 356789999985432 256777664321
Q ss_pred Cc---------eee-------cCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCe-eeCCCCcEEeeCCeE
Q psy15206 66 PE---------AQV-------DTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENN-AILPNGQTIFTGSTL 128 (232)
Q Consensus 66 ~~---------l~v-------~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~-~~~~~~~~~~~~~~l 128 (232)
.. +.+ ..+|.+....+....+.+|+.+.|.|.+.|.|.|.+.|++++. .+.........++.|
T Consensus 181 ~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L 260 (384)
T 3kld_A 181 TNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGIL 260 (384)
T ss_dssp TTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEE
T ss_pred ccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccceecCCCcEE
Confidence 11 111 1122222223455677889999999999999999999999654 333322223345689
Q ss_pred EECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC
Q psy15206 129 QIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND 208 (232)
Q Consensus 129 ~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~ 208 (232)
.|.++..+|.|.|+|.+.|..|. ......+.|..+|.+...+.+..+..|+.+.|.|.+.|.|.|.+.|+|+|..+...
T Consensus 261 ~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~ 339 (384)
T 3kld_A 261 EIPNFQQEDAGSYECVAENSRGK-NVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTR 339 (384)
T ss_dssp EECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCB
T ss_pred EECCCChhhCEEEEEEEEcCCCe-EEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCC
Confidence 99999999999999999998887 55667888888898888788888899999999999999999999999999988654
Q ss_pred CeE-----EEEEeccccCCceEEEEecC
Q psy15206 209 EYH-----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ~~~-----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.++ .+.+.++..+|+|.|+|.|.
T Consensus 340 ~~~~~~~~~L~i~~v~~~D~G~Y~C~A~ 367 (384)
T 3kld_A 340 DRIQIEQGTLNITIVNLSDAGMYQCVAE 367 (384)
T ss_dssp TTEEEETTEEEESSCCGGGCEEEEEEEE
T ss_pred ccEEEeCCEEEEeecChhhCEEEEEEEE
Confidence 443 45666778899999999984
No 12
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.97 E-value=1e-28 Score=179.29 Aligned_cols=211 Identities=17% Similarity=0.235 Sum_probs=162.6
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCCCC-eEEEEeCcEee-----------------eeEEEEeeee----cCcee
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHPIP-TISWRRNFKRL-----------------GRLHLAIPYT----SPEAQ 69 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~-~~~W~~~~~~~-----------------~~~~~~~~~~----~~~l~ 69 (232)
+|.|+.. |.+..+.+|++++|.|.+.+.|.+ .+.|++++..+ |.|.|..... .+.|.
T Consensus 1 kP~i~~~-p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~ 79 (262)
T 3rjd_A 1 KAVITLQ-PPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLE 79 (262)
T ss_dssp CCEEEES-SCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEESSSCCCCCEEEE
T ss_pred CCeEecC-CCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeeccCCeEEEecCCcccCeEEEEEEecCCccccEEEE
Confidence 5889888 888899999999999999988776 99999966543 4677766322 45666
Q ss_pred ecCCcEEecCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 70 VDTPPVILNNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 70 v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
|..++.... +....+.+|+.+.|.|.+ .+.+.+.+.|++++..+. .....+.|.|.++..+|.|.|+|.+.+.
T Consensus 80 v~~~~~~~~--~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~----~~~~~~~l~i~~~~~~d~G~Y~C~~~n~ 153 (262)
T 3rjd_A 80 IHRGWLLLQ--VSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFK----FFHWNSNLTILKTNISHNGTYHCSGMGK 153 (262)
T ss_dssp EECSSEEEE--ESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEE----EEEECCCEEESSCCGGGCEEEEEEEESS
T ss_pred EeccceEec--CCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccc----ccCCCCeEEEEECChhhCEEEEEEEeCC
Confidence 666655443 334567789999999999 667778999999988763 2233568999999999999999999987
Q ss_pred CCCceeeEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecCCC-Ce----EEEeeCCEEecC-CCeEEEEEeccc
Q psy15206 149 IGRGARRKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPH-PI----LYWAKDGEIVVN-DEYHSISNFGTS 219 (232)
Q Consensus 149 ~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~----~~W~~~g~~~~~-~~~~~~~~~~~~ 219 (232)
.+. ....+.+.|.. +|.+...+ ...+..|+.+.|.|.+.+.|. +. +.|+++|..+.. .....+.+.++.
T Consensus 154 ~~~-~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~~~~~~L~i~~v~ 231 (262)
T 3rjd_A 154 HRY-TSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTAR 231 (262)
T ss_dssp SEE-EEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEEESCCEEEESSCC
T ss_pred CCc-cccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecccCCCceEEEEEec
Confidence 643 55666777764 45555544 556788999999999999876 43 789999987763 344567788889
Q ss_pred cCCceEEEEecC
Q psy15206 220 EGTTGSLQCKVP 231 (232)
Q Consensus 220 ~~d~g~Y~C~~~ 231 (232)
.+|+|.|+|.|.
T Consensus 232 ~~d~G~Y~C~a~ 243 (262)
T 3rjd_A 232 REDSGLYWCEAA 243 (262)
T ss_dssp GGGCEEEEEEEE
T ss_pred hhhCeEEEEEEE
Confidence 999999999974
No 13
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.97 E-value=3.6e-29 Score=191.17 Aligned_cols=221 Identities=22% Similarity=0.331 Sum_probs=170.1
Q ss_pred cccCCCeeecCCCcceEeecCCeEEEEEEec-CCCCCeEEEEeCcEe---------------------------eeeEEE
Q psy15206 8 QVDTPPVILNNSTQLSVAKEGQSVQLECHAE-GHPIPTISWRRNFKR---------------------------LGRLHL 59 (232)
Q Consensus 8 ~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~-~~p~~~~~W~~~~~~---------------------------~~~~~~ 59 (232)
.+..+|.+...++.+..+.+|++++|.|.+. +.|.+.+.|++++.. .|.|+|
T Consensus 96 ~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 175 (382)
T 1cs6_A 96 RFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSC 175 (382)
T ss_dssp EEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEE
T ss_pred EeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEE
Confidence 3334454444435678899999999999965 568899999995321 247777
Q ss_pred Eeeee-----------cCceeec------CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEE
Q psy15206 60 AIPYT-----------SPEAQVD------TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTI 122 (232)
Q Consensus 60 ~~~~~-----------~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~ 122 (232)
..... ...|.+. .+|.+....+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ...
T Consensus 176 ~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~--~~~ 253 (382)
T 1cs6_A 176 FATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTS--KWL 253 (382)
T ss_dssp EEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSC--CCS
T ss_pred EEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCccccc--EEe
Confidence 66322 1223321 2344443345567788999999999999999999999998876532 222
Q ss_pred eeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCC
Q psy15206 123 FTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDG 202 (232)
Q Consensus 123 ~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g 202 (232)
.....|.|.++..+|.|.|+|.+.|..|. ....+.+.|..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|
T Consensus 254 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g 332 (382)
T 1cs6_A 254 SSEPLLHIQNVDFEDEGTYECEAENIKGR-DTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDG 332 (382)
T ss_dssp BSSSEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETT
T ss_pred cCCcEEEEccCChhhCEEEEEEEEcCCCe-EEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECC
Confidence 34568999999999999999999998876 66778888988998888888888899999999999999999999999999
Q ss_pred EEecCCCeE-----EEEEeccccCCceEEEEecC
Q psy15206 203 EIVVNDEYH-----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 203 ~~~~~~~~~-----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+....++ .|.+.++..+|+|.|+|.|.
T Consensus 333 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 366 (382)
T 1cs6_A 333 QPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAE 366 (382)
T ss_dssp EECCCCSSEEEETTEEEESSCCGGGCEEEEEEEE
T ss_pred EECCCCceEEEECCEEEECcCCcccCEEEEEEEE
Confidence 988766544 46777888899999999974
No 14
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.97 E-value=8.6e-29 Score=182.18 Aligned_cols=216 Identities=17% Similarity=0.202 Sum_probs=164.0
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcE----------------------eeeeEEEEeee-----
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK----------------------RLGRLHLAIPY----- 63 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~----------------------~~~~~~~~~~~----- 63 (232)
.+|.|... +.+..+.+|++++|.|.+.+ .+.|++++. +.|.|.|....
T Consensus 3 p~p~i~~~-~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 77 (289)
T 3ejj_X 3 PAPVIEPS-GPELVVEPGETVTLRCVSNG----SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAG 77 (289)
T ss_dssp -CCEEESC-SSEEEECTTCCEEEEEECSS----CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-----
T ss_pred CCcEecCC-CceEEECCCCCEEEEEEeCC----cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCcc
Confidence 46777766 78889999999999999987 499998421 22578887522
Q ss_pred -ecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCe-EEEEe-CCeeeCCCCcEE-eeCCeEEECCCCCCCCe
Q psy15206 64 -TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPT-ISWRR-ENNAILPNGQTI-FTGSTLQIPRITKEDRG 139 (232)
Q Consensus 64 -~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~-~~~~~~~~~~~~-~~~~~l~i~~~~~~~~g 139 (232)
..+.|.|..++......+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+....... ..++.|.|.++..+|.|
T Consensus 78 ~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 157 (289)
T 3ejj_X 78 STTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSN 157 (289)
T ss_dssp CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCE
T ss_pred eeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCE
Confidence 255667766554333345667888999999999998866665 99986 454444433333 34568999999999999
Q ss_pred EEEEEeEeCCCCceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeec-CCCCeEEEeeCCEEecCCC-----
Q psy15206 140 AYYCVAQNGIGRGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEA-YPHPILYWAKDGEIVVNDE----- 209 (232)
Q Consensus 140 ~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~g~~~~~~~----- 209 (232)
.|+|.+.+.........+.+.|. .+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|+++|..+....
T Consensus 158 ~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 237 (289)
T 3ejj_X 158 TYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQ 237 (289)
T ss_dssp EEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEEC
T ss_pred EEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccc
Confidence 99999995433335566777777 6788888887777788999999999998 7889999999998775421
Q ss_pred ------eEEEEEeccccCCceEEEEecC
Q psy15206 210 ------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 210 ------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
...|.+.++..+|+|.|+|.|.
T Consensus 238 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (289)
T 3ejj_X 238 DNYYKKVRALSLNAVDFQDAGIYSCVAS 265 (289)
T ss_dssp SSSEEEEEEEEESSCCSSSCEEEEEEEE
T ss_pred cceEEeeEEEEEEeecccCCEEEEEEEE
Confidence 3477888889999999999974
No 15
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=2.7e-29 Score=185.08 Aligned_cols=215 Identities=15% Similarity=0.209 Sum_probs=165.3
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe--------------------eeeEEEEee---eecC
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR--------------------LGRLHLAIP---YTSP 66 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~--------------------~~~~~~~~~---~~~~ 66 (232)
..+|.|... +.+..+.+|++++|.|.+.+ .+.|++++.. .|.|+|... ...+
T Consensus 10 ~~~P~i~~~-~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ng~~~~~ 84 (290)
T 2o26_X 10 PSPPSIHPA-QSELIVEAGDTLSLTCIDPD----FVRWTFKTYFNEMVENKKNEWIQEKAEATRTGTYTCSNSNGLTSSI 84 (290)
T ss_dssp --CCEESSC-SSEEEEETTSCEEEEEECTT----EEEEEEECSSSCEEEECSSEEEETTCCGGGCEEEEEEESSSCEEEE
T ss_pred CCCCEEeCC-CCeEEEcCCCcEEEEECCCC----cEEEecCCcceeeecCCCceEEEeccCHHhCeEEEEEeeCCccEEE
Confidence 568999976 88899999999999999988 8999995432 257777663 2355
Q ss_pred ceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCC-CeEEEE-eCCeeeCCCCcEEe-eCCeEEECCCCCCCCe-EEE
Q psy15206 67 EAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPI-PTISWR-RENNAILPNGQTIF-TGSTLQIPRITKEDRG-AYY 142 (232)
Q Consensus 67 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~W~-~~~~~~~~~~~~~~-~~~~l~i~~~~~~~~g-~y~ 142 (232)
.|.|..+|... .......+.+|+.+.|.|.+.+ |. +.+.|+ +++..+....+... ....|.|.++..+|.| .|+
T Consensus 85 ~l~V~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~ 162 (290)
T 2o26_X 85 YVFVRDPAKLF-LVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVR 162 (290)
T ss_dssp EEEEECSSCCB-CCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEE
T ss_pred EEEEeCCCccc-ccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEE
Confidence 67777666555 3555677889999999999986 77 889995 66766554433332 3568999999999999 999
Q ss_pred EEeEeCCCCceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecCCCCe-EEEeeCCEEe----c-------
Q psy15206 143 CVAQNGIGRGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPI-LYWAKDGEIV----V------- 206 (232)
Q Consensus 143 C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~g~~~----~------- 206 (232)
|.+.+..+...+..+.+.|. .+|.+...+....+..|+.+.|.|.+.|.|.+. +.|+++|..+ .
T Consensus 163 C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~ 242 (290)
T 2o26_X 163 CAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWH 242 (290)
T ss_dssp EEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEE
T ss_pred EEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccc
Confidence 99999754433445677776 678888777777888999999999999999996 9999998652 1
Q ss_pred -----CCCeEEEEEeccccCCceEEEEecC
Q psy15206 207 -----NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 -----~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
......|.+.++...|+|.|+|.|.
T Consensus 243 ~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 272 (290)
T 2o26_X 243 RGDFNYERQETLTISSARVDDSGVFMCYAN 272 (290)
T ss_dssp EETTEEEEEEEEEESSCCSSSCEEEEEEEE
T ss_pred cCceeeEEEEEEEEcCCCcccCeEEEEEEe
Confidence 1124567788889999999999984
No 16
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.97 E-value=5.5e-29 Score=197.56 Aligned_cols=222 Identities=18% Similarity=0.235 Sum_probs=172.4
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEe-CcEe------------------------ee-eEEEE
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRR-NFKR------------------------LG-RLHLA 60 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~-~~~~------------------------~~-~~~~~ 60 (232)
+.|..+|.+... +.+..+.+|++++|.|.+.+.+.+.+.|++ ++.. .| .|+|.
T Consensus 109 l~V~~p~~~~~~-~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~ 187 (524)
T 2ec8_A 109 VFVRDPAKLFLV-DRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCS 187 (524)
T ss_dssp EECCCSSCSBCC-CCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEE
T ss_pred EEECCCCccccc-ccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEE
Confidence 456667777755 778889999999999999987778999988 3321 25 78887
Q ss_pred eeee-------cCceeec----CCcEEecCCCCceEeecCCcEEEEeeeccCCCCe-EEEEeCCeee--CCCCc------
Q psy15206 61 IPYT-------SPEAQVD----TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPT-ISWRRENNAI--LPNGQ------ 120 (232)
Q Consensus 61 ~~~~-------~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~~~~--~~~~~------ 120 (232)
.... .+.|.|. .+|.+.. .+....+.+|+.+.|.|.+.+.|.+. +.|++++..+ .....
T Consensus 188 a~n~~~~~~s~~~~l~V~~~~~~~p~i~~-~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~ 266 (524)
T 2ec8_A 188 VDQEGKSVLSEKFILKVRPAFKAVPVVSV-SKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGD 266 (524)
T ss_dssp EC----CCCCCCEECCEECCCCSCCEEEC-SCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSS
T ss_pred EEECCceEEEEEEEEEEEeCCCCCCcEEe-cCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccC
Confidence 6322 4455554 4555543 55666788999999999999988876 9999998773 21111
Q ss_pred -EEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccc---eeeeeccCeEEEEEEeecCCCCe-
Q psy15206 121 -TIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQST---RIGQALHHDMDLDCHIEAYPHPI- 195 (232)
Q Consensus 121 -~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~---~~~~~~g~~~~l~C~~~~~p~~~- 195 (232)
.....+.|.|.++..+|.|.|+|.+.|..|. ....+.+.|..+|.+...+. ...+..|+.+.|.|.+.|.|.+.
T Consensus 267 ~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~ 345 (524)
T 2ec8_A 267 FNYERQATLTISSARVNDSGVFMCYANNTFGS-ANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEH 345 (524)
T ss_dssp SCEEEEEEEEESSCCTTTCEEEEEEEECSSCE-EEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCE
T ss_pred CccceEEEEEECCCCHHHCEEEEEEEEecCCc-eEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcE
Confidence 1223468999999999999999999998877 45588889998888876553 57788999999999999999999
Q ss_pred EEEeeCCEEecCCC--------------eEEEEEeccccCCceEEEEecC
Q psy15206 196 LYWAKDGEIVVNDE--------------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 196 ~~W~~~g~~~~~~~--------------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|+|+|..+.... ...|.+.++...|+|.|+|.|.
T Consensus 346 v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 395 (524)
T 2ec8_A 346 QQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVS 395 (524)
T ss_dssp EEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEE
Confidence 99999998765432 3578888899999999999874
No 17
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.97 E-value=3.2e-28 Score=187.10 Aligned_cols=219 Identities=23% Similarity=0.465 Sum_probs=167.6
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecC-CCCCeEEEEeCcE-------------------------------eeeeEE
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEG-HPIPTISWRRNFK-------------------------------RLGRLH 58 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~-~p~~~~~W~~~~~-------------------------------~~~~~~ 58 (232)
....+... |.++.+.+|++++|.|.+.+ .|.+.+.|+|++. +.|.|+
T Consensus 20 ~~~~~~~~-P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~ 98 (403)
T 3laf_A 20 RSLHFVSE-PSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQ 98 (403)
T ss_dssp CSSEEEEC-CCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEE
T ss_pred eeEEEEeC-CCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEE
Confidence 34555555 88999999999999999986 6788999999542 235778
Q ss_pred EEeeee--------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC---CCc-EEeeCC
Q psy15206 59 LAIPYT--------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP---NGQ-TIFTGS 126 (232)
Q Consensus 59 ~~~~~~--------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~---~~~-~~~~~~ 126 (232)
|..... .+.+.+..++.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ... .....+
T Consensus 99 C~~~~~~~~~~~s~~~~l~v~~p~~~~~-~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 177 (403)
T 3laf_A 99 CEASLGDSGSIISRTAKVMVAGPLRFLS-QTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSG 177 (403)
T ss_dssp EEEECGGGCEEECCCEEEEECCCCEECS-CCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTS
T ss_pred EEEEeCCCccEEEEEEEEEecCCCcccc-CCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCc
Confidence 877421 44566666665543 55667888999999999999988889999999887632 222 223456
Q ss_pred eEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEecc------EEEeccceeeeeccCeEEEEEEeecCCCCeEEEee
Q psy15206 127 TLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAP------IVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAK 200 (232)
Q Consensus 127 ~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p------~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~ 200 (232)
.|.|.++..+|.|.|+|.+.+..+........+.+...| .+...+....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 178 ~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~ 257 (403)
T 3laf_A 178 ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLR 257 (403)
T ss_dssp CEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEE
T ss_pred eEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEE
Confidence 899999999999999999999766544455667666544 23445666778899999999999999999999999
Q ss_pred CCEEecCCC-e------EEEEEeccccCCceEEEEecC
Q psy15206 201 DGEIVVNDE-Y------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 201 ~g~~~~~~~-~------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|..+.... . ..+.+.++..+|+|.|+|.|.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 295 (403)
T 3laf_A 258 GEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVT 295 (403)
T ss_dssp TTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEE
T ss_pred CCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEE
Confidence 998875332 2 247777888899999999874
No 18
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.97 E-value=1.5e-28 Score=199.37 Aligned_cols=220 Identities=19% Similarity=0.303 Sum_probs=168.3
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee----------------eeEEEEeeee------
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL----------------GRLHLAIPYT------ 64 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~----------------~~~~~~~~~~------ 64 (232)
+.|..+|.+....+.+..+.+|+.++|.|.+.+.|.+.+.|++++..+ |.|+|.....
T Consensus 375 l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 454 (642)
T 1e07_A 375 LNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSR 454 (642)
T ss_pred EEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCCceEEEccCChhhCeEEEEEEEcCCCCCcc
Confidence 445555544322266778999999999999999999999999976433 5777776432
Q ss_pred --cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe--eCCeEEECCCCCCC
Q psy15206 65 --SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF--TGSTLQIPRITKED 137 (232)
Q Consensus 65 --~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~ 137 (232)
.+.+.+.. +|.+. ......+.+|+.+.|.|.+.+ +.+.+.|++++..+....+... .++.|.|.++...|
T Consensus 455 s~~~~v~v~~~~~~p~i~--~~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d 531 (642)
T 1e07_A 455 TTVKTITVSAELPKPSIS--SNNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRND 531 (642)
T ss_pred cceEEEEEeccCCCceEe--cCCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhc
Confidence 13344432 23322 233456778999999999984 7789999999988765554433 24689999999999
Q ss_pred CeEEEEEeEeCCCCceeeEEEEEEEeccE-EEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeEEEEEe
Q psy15206 138 RGAYYCVAQNGIGRGARRKIEVKVEFAPI-VTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYHSISNF 216 (232)
Q Consensus 138 ~g~y~C~~~~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~ 216 (232)
.|.|+|.+.|..|...+..+.|.|..+|. +...+.+..+..|+.+.|.|.+.|.|.+.+.|+|+|..+..+. .|.+.
T Consensus 532 ~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~~--~L~i~ 609 (642)
T 1e07_A 532 ARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQ--VLFIA 609 (642)
T ss_pred CceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccCc--eEEEC
Confidence 99999999998876555567888876554 5556777788899999999999999999999999999887654 56666
Q ss_pred ccccCCceEEEEecC
Q psy15206 217 GTSEGTTGSLQCKVP 231 (232)
Q Consensus 217 ~~~~~d~g~Y~C~~~ 231 (232)
++...|+|.|+|.|.
T Consensus 610 ~~~~~d~G~Y~C~a~ 624 (642)
T 1e07_A 610 KITPNNNGTYACFVS 624 (642)
T ss_pred cccccCCeEEEEEEE
Confidence 788899999999984
No 19
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=189.36 Aligned_cols=219 Identities=16% Similarity=0.223 Sum_probs=151.6
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCC-CCCeEEEEeCcEee-------------------------eeEEEEee
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGH-PIPTISWRRNFKRL-------------------------GRLHLAIP 62 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~-p~~~~~W~~~~~~~-------------------------~~~~~~~~ 62 (232)
...+|.|.. +.+..+.+|++++|.|.+.+. |.+.+.|++++..+ |.|.|...
T Consensus 4 ~~~~P~~~~--~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 81 (317)
T 2y25_A 4 PFTGPHFVE--YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILK 81 (317)
T ss_dssp SSSCCEEEE--EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEE
T ss_pred ccCCCcEee--eeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEE
Confidence 456899984 456889999999999999986 77899999965433 34555442
Q ss_pred ee------cCceeecCCcEEecCCCCceEeecCCcEEEEeeecc----------CCCCeEEEEeCCeeeCCCCcEEee--
Q psy15206 63 YT------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEG----------HPIPTISWRRENNAILPNGQTIFT-- 124 (232)
Q Consensus 63 ~~------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~----------~~~~~~~W~~~~~~~~~~~~~~~~-- 124 (232)
.. .+.|.+..++.... .+....+..|+.+.|.|.+.+ .|.+.+.|++++..+....+....
T Consensus 82 n~~g~~~~~~~l~v~~~~~~~~-~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~ 160 (317)
T 2y25_A 82 DDRGKDKSRLKLVDEAFKELMM-EVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVT 160 (317)
T ss_dssp SSSCEEEEEECCSTHHHHHHHH-HHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEEC
T ss_pred CCCCcEEEEEEEEEecCccccc-cCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEecc
Confidence 21 22222222211110 011122334566666666655 678899999999887655444332
Q ss_pred C--CeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEE--------------------eccEEEe-ccceeeeeccCe
Q psy15206 125 G--STLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVE--------------------FAPIVTV-QSTRIGQALHHD 181 (232)
Q Consensus 125 ~--~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~--------------------~~p~~~~-~~~~~~~~~g~~ 181 (232)
. ..|.|.++..+|.|.|+|.+.|..+. ....+.+.+. ..|.+.. .+....+..|+.
T Consensus 161 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~ 239 (317)
T 2y25_A 161 GEQIWLQINEPTPNDKGKYVMELFDGKTG-HQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKA 239 (317)
T ss_dssp SSEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSB
T ss_pred CCEEEEEECcCCcccCeeEEEEEEeCCce-EEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCE
Confidence 1 24999999999999999999997765 3344444432 1244433 355667889999
Q ss_pred EEEEEEeecCCCCeEEEeeCCEEecCCC----------eEEEEEeccccCCceEEEEecC
Q psy15206 182 MDLDCHIEAYPHPILYWAKDGEIVVNDE----------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 182 ~~l~C~~~~~p~~~~~W~~~g~~~~~~~----------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|.|.+.|.|.+.+.|+++|..+..+. ...|.+.++...|+|.|+|.|.
T Consensus 240 ~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 299 (317)
T 2y25_A 240 LNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVK 299 (317)
T ss_dssp BCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEE
T ss_pred EEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 9999999999999999999998776433 3477778888999999999874
No 20
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.96 E-value=8e-29 Score=196.04 Aligned_cols=204 Identities=15% Similarity=0.199 Sum_probs=155.5
Q ss_pred cceEeecCCeEEEEEEecCCCCCeEEEEeCcEe-----------------------eeeEEEEeeee-------cCceee
Q psy15206 21 QLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR-----------------------LGRLHLAIPYT-------SPEAQV 70 (232)
Q Consensus 21 ~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~-----------------------~~~~~~~~~~~-------~~~l~v 70 (232)
.+.....|+.++|.|.+.|.|.+.++|++++.. .|.|.|..... .+.|.|
T Consensus 147 ~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V 226 (527)
T 3qs9_E 147 RPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDL 226 (527)
T ss_dssp EEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEES
T ss_pred CCcEEecCCceEEEEEEceecCCeEEEEECCCCCccccccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEE
Confidence 344556788899999999999999999984322 24577766321 355666
Q ss_pred cCCcEEecCCCCceEeecCCcEEEEeeec-cCCCCeEEEEeCCeeeCCCCcE----------EeeCCeEEECCCCCCCCe
Q psy15206 71 DTPPVILNNSPQLSVAKEGQSVQLECHAE-GHPIPTISWRRENNAILPNGQT----------IFTGSTLQIPRITKEDRG 139 (232)
Q Consensus 71 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~----------~~~~~~l~i~~~~~~~~g 139 (232)
..+|.. .+....+.+|+.+.|.|.+. +.|.+.+.|++++..+...... ......|.|.++..+|+|
T Consensus 227 ~~~p~~---~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG 303 (527)
T 3qs9_E 227 NQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTG 303 (527)
T ss_dssp SSCCCC---SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCE
T ss_pred eccCcc---CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCe
Confidence 655543 34567788999999999996 8889999999999876432211 222346999999999999
Q ss_pred EEEEEeEeCCCCceeeEEEEEEEeccEEEecc--ceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC-----eEE
Q psy15206 140 AYYCVAQNGIGRGARRKIEVKVEFAPIVTVQS--TRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE-----YHS 212 (232)
Q Consensus 140 ~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~-----~~~ 212 (232)
.|+|.+.|. ....+.+.|..+|.+...+ ....+..|+.+.|.|.+.|.|.|.+.|+|+|..+.... ...
T Consensus 304 ~Y~C~a~N~----~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~ 379 (527)
T 3qs9_E 304 YYTCSSSKH----PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYS 379 (527)
T ss_dssp EEEEEETTE----EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSE
T ss_pred EEEEEEEeC----CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcE
Confidence 999999886 4567788888888776554 34567789999999999999999999999999886443 457
Q ss_pred EEEeccccCCceEEEEecC
Q psy15206 213 ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 213 ~~~~~~~~~d~g~Y~C~~~ 231 (232)
|.+.++...|+|.|+|.|.
T Consensus 380 L~I~~v~~~D~G~YtC~A~ 398 (527)
T 3qs9_E 380 ISKFCNHKHQPGEYIFHAE 398 (527)
T ss_dssp EEEECCCTTCCSCEEEEEE
T ss_pred EEEecCCcccCEEEEEEEE
Confidence 8888899999999999974
No 21
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.96 E-value=1.5e-28 Score=188.93 Aligned_cols=224 Identities=21% Similarity=0.387 Sum_probs=165.4
Q ss_pred cccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe-------------------------------eee
Q psy15206 8 QVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR-------------------------------LGR 56 (232)
Q Consensus 8 ~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~-------------------------------~~~ 56 (232)
.+..+|.|...++.+..+.+|++++|.|.+.+.|.+.+.|+|++.. .|.
T Consensus 12 ~~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~ 91 (404)
T 3p3y_A 12 ELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 91 (404)
T ss_dssp -CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEE
T ss_pred hccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEE
Confidence 4567999997657788999999999999999999999999995431 357
Q ss_pred EEEEeee-------ecCceeecCCcEEecCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCeeeCC-CCcE-EeeCC
Q psy15206 57 LHLAIPY-------TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENNAILP-NGQT-IFTGS 126 (232)
Q Consensus 57 ~~~~~~~-------~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~-~~~~-~~~~~ 126 (232)
|+|.... ..+.|.|..+|...........+.+|+.+.|.|.+ .+.|.+.+.|++++..... ..+. ...++
T Consensus 92 Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 171 (404)
T 3p3y_A 92 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNG 171 (404)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTS
T ss_pred EEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCC
Confidence 8887632 24566776666554434445678899999999998 7788889999998755432 2222 22467
Q ss_pred eEEECCCCCCC-CeEEEEEeEeCCCCcee--eEEEEEEEe-------ccEEEec---cceeeeeccCeEEEEEEeecCCC
Q psy15206 127 TLQIPRITKED-RGAYYCVAQNGIGRGAR--RKIEVKVEF-------APIVTVQ---STRIGQALHHDMDLDCHIEAYPH 193 (232)
Q Consensus 127 ~l~i~~~~~~~-~g~y~C~~~~~~~~~~~--~~~~l~v~~-------~p~~~~~---~~~~~~~~g~~~~l~C~~~~~p~ 193 (232)
.|.|.++...| .|.|+|.+.+..+.... ..+.+.+.. +|.+... +....+..|+.+.|.|.+.|.|.
T Consensus 172 ~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~ 251 (404)
T 3p3y_A 172 DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT 251 (404)
T ss_dssp CEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSC
T ss_pred cEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCC
Confidence 89999999999 59999999987664322 223444432 2222211 12355778999999999999999
Q ss_pred CeEEEeeCCEEecCCC------eEEEEEeccccCCceEEEEecC
Q psy15206 194 PILYWAKDGEIVVNDE------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 194 ~~~~W~~~g~~~~~~~------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.+.|+++|..+.... ...+.+.++...|+|.|+|.|.
T Consensus 252 ~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 295 (404)
T 3p3y_A 252 PDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS 295 (404)
T ss_dssp CEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEE
T ss_pred CcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEE
Confidence 9999999998776443 2357778888999999999874
No 22
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.96 E-value=1.7e-28 Score=185.31 Aligned_cols=212 Identities=18% Similarity=0.261 Sum_probs=133.4
Q ss_pred CcceEeecCCeEEEEEEecCCCC-----------CeEEEEeCcE--------------------------------eeee
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPI-----------PTISWRRNFK--------------------------------RLGR 56 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~-----------~~~~W~~~~~--------------------------------~~~~ 56 (232)
..++.+.+|++++|.|.+.+.|. +.+.|++++. +.|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 67788999999999999997654 8999999652 1146
Q ss_pred EEEEeeee------cCceeecCCcEEec---CCCCceEeecCCcEEEEeee-----ccCCCCeEEEEeCCeeeCCCCcEE
Q psy15206 57 LHLAIPYT------SPEAQVDTPPVILN---NSPQLSVAKEGQSVQLECHA-----EGHPIPTISWRRENNAILPNGQTI 122 (232)
Q Consensus 57 ~~~~~~~~------~~~l~v~~~p~~~~---~~~~~~~~~~g~~~~l~C~~-----~~~~~~~~~W~~~~~~~~~~~~~~ 122 (232)
|.|..... .+.|.|..++.... ..+....+..|+.+.|.|.+ .+.|.+.+.|++++..+.......
T Consensus 94 Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~ 173 (349)
T 4dep_C 94 YTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVI 173 (349)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEE
T ss_pred EEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcccee
Confidence 66665322 34466655432211 11234466789999999985 667889999999999876555555
Q ss_pred eeCCeEEECCCCCCCCeEEEEEeEeCC-CCc--eeeEEEEEEEe------ccEEEecccee--eeeccCeEEEEEEee--
Q psy15206 123 FTGSTLQIPRITKEDRGAYYCVAQNGI-GRG--ARRKIEVKVEF------APIVTVQSTRI--GQALHHDMDLDCHIE-- 189 (232)
Q Consensus 123 ~~~~~l~i~~~~~~~~g~y~C~~~~~~-~~~--~~~~~~l~v~~------~p~~~~~~~~~--~~~~g~~~~l~C~~~-- 189 (232)
..+..|.|.++..+|.|.|+|.+.+.. +.. ....+.+.|.. +|.+...+... .+..|+.+.|.|.+.
T Consensus 174 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~ 253 (349)
T 4dep_C 174 PEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFS 253 (349)
T ss_dssp EETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEEC
T ss_pred ecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEc
Confidence 666789999999999999999999975 432 25666676765 45554433322 677899999999998
Q ss_pred --cCCCCeEEEeeCCEEecC----------------CC---eEEEEEeccccCCc-eEEEEecC
Q psy15206 190 --AYPHPILYWAKDGEIVVN----------------DE---YHSISNFGTSEGTT-GSLQCKVP 231 (232)
Q Consensus 190 --~~p~~~~~W~~~g~~~~~----------------~~---~~~~~~~~~~~~d~-g~Y~C~~~ 231 (232)
|.|.+.+.|+++|..+.. .. ...|.+.++..+|+ |.|+|.|.
T Consensus 254 ~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~ 317 (349)
T 4dep_C 254 FLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHAR 317 (349)
T ss_dssp CCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEE
T ss_pred cCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEE
Confidence 578899999999987654 21 12266778888999 99999973
No 23
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=5.2e-28 Score=185.46 Aligned_cols=209 Identities=19% Similarity=0.399 Sum_probs=159.6
Q ss_pred CcceEeecCCeEEEEEEe-cCCCCCeEEEEeCc---E----------------------------eee---eEEEEeeee
Q psy15206 20 TQLSVAKEGQSVQLECHA-EGHPIPTISWRRNF---K----------------------------RLG---RLHLAIPYT 64 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~-~~~p~~~~~W~~~~---~----------------------------~~~---~~~~~~~~~ 64 (232)
+.+..+.+|++++|.|.+ .+.|.+.+.|++++ . +.| .|.|.....
T Consensus 107 ~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~ 186 (395)
T 1bih_A 107 THEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNA 186 (395)
T ss_dssp EEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECT
T ss_pred CcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEec
Confidence 456778899999999996 67889999999964 0 114 677766332
Q ss_pred cCc---------eeec----------CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC--cEEe
Q psy15206 65 SPE---------AQVD----------TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG--QTIF 123 (232)
Q Consensus 65 ~~~---------l~v~----------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~--~~~~ 123 (232)
... +.+. .+|.+ .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... +...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~ 263 (395)
T 1bih_A 187 AVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY---VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITR 263 (395)
T ss_dssp TCSSCEEEEEEEECCCBCCSSCCCCCCEEEE---ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEES
T ss_pred ccceEEEeeeEEecccccccccccCCcCcee---cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEE
Confidence 110 0000 11112 2345678899999999999999999999999998775432 2221
Q ss_pred ----eCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccce-eeeeccCeEEEEEEeecCCCCeEEE
Q psy15206 124 ----TGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTR-IGQALHHDMDLDCHIEAYPHPILYW 198 (232)
Q Consensus 124 ----~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~~~W 198 (232)
....|.|.++..+|.|.|+|.+.|..|......+.|.|..+|.+...+.. ..+..|+.+.|.|.+.|.|.+.+.|
T Consensus 264 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W 343 (395)
T 1bih_A 264 HNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVW 343 (395)
T ss_dssp CSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEE
T ss_pred EecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEE
Confidence 12379999999999999999999988875555889999999998887776 6788999999999999999999999
Q ss_pred eeCCEEecCCC----eEEEEEeccccCCceEEEEecC
Q psy15206 199 AKDGEIVVNDE----YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 199 ~~~g~~~~~~~----~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+++|..+..+. .-.|.+.++..+|+|.|+|.|.
T Consensus 344 ~~~g~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 380 (395)
T 1bih_A 344 SHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYGCRAT 380 (395)
T ss_dssp EETTEECCSSSEEEETTEEEESSCCSTTCEEEEEEEE
T ss_pred EECCEECCCCceEEECCEEEEeeCCcccCEEEEEEEE
Confidence 99998876431 1167778888999999999974
No 24
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.96 E-value=2.6e-28 Score=179.84 Aligned_cols=216 Identities=19% Similarity=0.239 Sum_probs=161.4
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCc----------------------EeeeeEEEEeee----
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNF----------------------KRLGRLHLAIPY---- 63 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~----------------------~~~~~~~~~~~~---- 63 (232)
..+|.|... +.+..+.+|++++|.|.+.+. +.|+++. .+.|.|.|....
T Consensus 2 ~~~P~i~~~-~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~ 76 (292)
T 4dkd_C 2 GSIPVIEPS-VPELVVKPGATVTLRCVGNGS----VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLG 76 (292)
T ss_dssp --CCEEESC-CSSCEECTTCCEEEEEECSSC----CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----
T ss_pred CCCceecCC-CCeEEEcCCCcEEEEEcCCCc----eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCC
Confidence 468999988 788899999999999999883 8898632 122467776532
Q ss_pred --ecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCC--CeEEEEeCC-eeeCCCCcEEe-eCCeEEECCCCCCC
Q psy15206 64 --TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPI--PTISWRREN-NAILPNGQTIF-TGSTLQIPRITKED 137 (232)
Q Consensus 64 --~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~~~-~~~~~~~~~~~-~~~~l~i~~~~~~~ 137 (232)
..+.|.|..++......+....+.+|+.+.|.|.+.+ +. +.+.|++++ ..+........ ....|.|.++..+|
T Consensus 77 ~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 155 (292)
T 4dkd_C 77 GSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQ 155 (292)
T ss_dssp CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGG
T ss_pred cceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHH
Confidence 1556677666653333455677889999999999987 44 679999984 33333333322 24569999999999
Q ss_pred CeEEEEEeEeCCCCceeeEEEEEEEe----ccEEEeccceeeeeccCeEEEEEEeecCCC-CeEEEeeCCEEecCC----
Q psy15206 138 RGAYYCVAQNGIGRGARRKIEVKVEF----APIVTVQSTRIGQALHHDMDLDCHIEAYPH-PILYWAKDGEIVVND---- 208 (232)
Q Consensus 138 ~g~y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~W~~~g~~~~~~---- 208 (232)
.|.|+|.+.+..+......+.+.|.. +|.+...+....+..|+.+.|.|.+.+.|. +.+.|++++..+...
T Consensus 156 ~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~ 235 (292)
T 4dkd_C 156 SQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSD 235 (292)
T ss_dssp CSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEE
T ss_pred CeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccce
Confidence 99999999987665455577888886 888888887777789999999999998775 468999988755421
Q ss_pred ---C----eEEEEEeccccCCceEEEEecC
Q psy15206 209 ---E----YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ---~----~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
. ...|.+.++..+|+|.|+|.|.
T Consensus 236 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (292)
T 4dkd_C 236 FHNNRYQKVLTLNLDQVDFQHAGNYSCVAS 265 (292)
T ss_dssp EETTEEEEEEEEEESSCCTTSCEEEEEEEE
T ss_pred eccceeeeEEEEEECccChhcCeEEEEEEe
Confidence 1 2378888889999999999973
No 25
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.96 E-value=1.8e-27 Score=193.18 Aligned_cols=208 Identities=21% Similarity=0.344 Sum_probs=160.2
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee----------------eeEEEEeeee--------cCceeecCCc-
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL----------------GRLHLAIPYT--------SPEAQVDTPP- 74 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~----------------~~~~~~~~~~--------~~~l~v~~~p- 74 (232)
+.+..+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|..... .+.|.|..++
T Consensus 210 ~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~ 289 (642)
T 1e07_A 210 PLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPP 289 (642)
T ss_pred cCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEcccCCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCC
Confidence 66778899999999999999999999999965433 5788876432 2345554321
Q ss_pred -EEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe--eCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 75 -VILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF--TGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 75 -~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
..+. ......+..|+.+.|.|.+.+.+ +.+.|+++|..+....+... .++.|.|.++..+|.|.|.|.+.|..+.
T Consensus 290 ~p~i~-~~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 367 (642)
T 1e07_A 290 KPFIT-SNNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSV 367 (642)
T ss_pred CCEEE-cCCceeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCC
Confidence 2222 22334555688899999998875 68999999987755444433 3568999999999999999999998876
Q ss_pred ceeeEEEEEEEeccEE-EeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeEEEEEeccccCCceEEEEec
Q psy15206 152 GARRKIEVKVEFAPIV-TVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYHSISNFGTSEGTTGSLQCKV 230 (232)
Q Consensus 152 ~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~d~g~Y~C~~ 230 (232)
..+..+.+.|..+|.. ...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+.... .+.+.++...|+|.|+|.|
T Consensus 368 ~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~~--~L~i~~~~~~d~G~Y~C~a 445 (642)
T 1e07_A 368 DHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQ--ELFISNITEKNSGLYTCQA 445 (642)
T ss_pred cceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCCc--eEEEccCChhhCeEEEEEE
Confidence 5566678888876643 445666678899999999999999999999999999887654 4566677889999999997
Q ss_pred C
Q psy15206 231 P 231 (232)
Q Consensus 231 ~ 231 (232)
.
T Consensus 446 ~ 446 (642)
T 1e07_A 446 N 446 (642)
T ss_pred E
Confidence 4
No 26
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.96 E-value=3.2e-28 Score=187.94 Aligned_cols=212 Identities=13% Similarity=0.132 Sum_probs=138.3
Q ss_pred eeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee--------------------------eeEEEEeeee---
Q psy15206 14 VILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL--------------------------GRLHLAIPYT--- 64 (232)
Q Consensus 14 ~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~--------------------------~~~~~~~~~~--- 64 (232)
.++.. +.++.|.+|++++|.|.+.+.|.+.|.|++++..+ |.|.|.....
T Consensus 50 ~~~~~-~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~ 128 (423)
T 3qs7_E 50 GTVYE-AAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATN 128 (423)
T ss_dssp -------CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CE
T ss_pred cceec-cccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCc
Confidence 34444 56889999999999999999999999999865321 4566655222
Q ss_pred ---cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECC-CCCCCCeE
Q psy15206 65 ---SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPR-ITKEDRGA 140 (232)
Q Consensus 65 ---~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~-~~~~~~g~ 140 (232)
.+.|.|..+|.... ........|+.+.|.|.+.|.|.|.+.|++++........ ........... +...|.|.
T Consensus 129 ~~~~~~l~V~~~p~~~~--~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~-~~~~~~~~~~~~l~~~d~G~ 205 (423)
T 3qs7_E 129 YTILFTVSIRNTLLYTL--RRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKE-ESPAVVKKEEKVLHELFGTD 205 (423)
T ss_dssp EEEEEEEEEC-----CE--EEEEEEECSSSSCEEEEEEESSCCEEEEEEC--------------CEEECCSEECCCCSSC
T ss_pred EEEEEEEEEecCccccc--cCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccc-cccccccccceEEecccCeE
Confidence 45566654443321 1112344677889999999999999999998765421100 00000011111 15789999
Q ss_pred EEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeec-CCCCeEEEeeCCEEecCCC----------
Q psy15206 141 YYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEA-YPHPILYWAKDGEIVVNDE---------- 209 (232)
Q Consensus 141 y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~g~~~~~~~---------- 209 (232)
|.|.+.|..|......+.+.|..+|.+ .+....+..|+.+.|.|.+.| .|.+.+.|+|+|..+....
T Consensus 206 Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~ 283 (423)
T 3qs7_E 206 IRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTN 283 (423)
T ss_dssp EEEEEECSSCEEEEECEEEESSSCCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETT
T ss_pred EEEEEEcCCCCcceeeEEEEEecCCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCC
Confidence 999999988864444466666655543 445667889999999999998 6778999999987664321
Q ss_pred -----eEEEEEeccccCCceEEEEecC
Q psy15206 210 -----YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 210 -----~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
...|.+.++...|+|.|+|.|.
T Consensus 284 ~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 310 (423)
T 3qs7_E 284 RTMIRILFAFVSSVARNDTGYYTCSSS 310 (423)
T ss_dssp TEEEEEEEEEESSCCTTTCEEEEEEET
T ss_pred ceeEEEEEEEEeecCHHHCEEEEEEEe
Confidence 1257788889999999999985
No 27
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.96 E-value=8.2e-28 Score=190.83 Aligned_cols=220 Identities=14% Similarity=0.237 Sum_probs=167.5
Q ss_pred CCcccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe-------------------eeeEEEEeee---
Q psy15206 6 ESQVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR-------------------LGRLHLAIPY--- 63 (232)
Q Consensus 6 ~~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~-------------------~~~~~~~~~~--- 63 (232)
.+.|..||.|... +.+..+.+|++++|.|.+.+ .+.|++++.. .|.|.|....
T Consensus 30 ~l~v~~pP~i~~~-~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ng~~ 104 (524)
T 2ec8_A 30 SPGEPSPPSIHPG-KSDLIVRVGDEIRLLCTDPG----FVKWTFEILDETNENKQNEWITEKAEATNTGKYTCTNKHGLS 104 (524)
T ss_dssp ---CCCCCEEESC-CSEEECCTTSCEEEEEECTT----EEEEEEESSSCCEEECSSEEEESSCCSTTCEEEEEEETTSCE
T ss_pred EcCCCCCCccCCC-CceEEEeCCCeEEEEEeCCc----eEEEcCCCccccccCccceEEEcccchhhCEEEEEeecCCcc
Confidence 3567889999877 77889999999999999987 9999996432 2477776622
Q ss_pred ecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEe-CCeeeCCCCcEEe-eCCeEEECCCCCCCCe-E
Q psy15206 64 TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRR-ENNAILPNGQTIF-TGSTLQIPRITKEDRG-A 140 (232)
Q Consensus 64 ~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~-~~~~~~~~~~~~~-~~~~l~i~~~~~~~~g-~ 140 (232)
..+.|.|..++... ..+....+.+|+.+.|.|.+.+.+.+.+.|++ ++..+....+... ..+.|.|.++...|.| .
T Consensus 105 ~~~~l~V~~p~~~~-~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~ 183 (524)
T 2ec8_A 105 NSIYVFVRDPAKLF-LVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLC 183 (524)
T ss_dssp EEEEEECCCSSCSB-CCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCE
T ss_pred eEEEEEECCCCccc-ccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCce
Confidence 35566666655544 35556678899999999999886668999998 6666554444333 4678999999999999 9
Q ss_pred EEEEeEeCCCCceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecCCCCe-EEEeeCCEEe--c-------
Q psy15206 141 YYCVAQNGIGRGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPI-LYWAKDGEIV--V------- 206 (232)
Q Consensus 141 y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~g~~~--~------- 206 (232)
|+|.+.+..+...+..+.+.|. .+|.+...+....+..|+.+.|.|.+.+.|.+. +.|+++|..+ .
T Consensus 184 Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~ 263 (524)
T 2ec8_A 184 LHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWH 263 (524)
T ss_dssp EEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEE
T ss_pred EEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCcccccccccc
Confidence 9999998766544556777776 678888888888899999999999999999886 9999998762 2
Q ss_pred -----CCCeEEEEEeccccCCceEEEEecC
Q psy15206 207 -----NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 -----~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
......|.+.++...|+|.|+|.|.
T Consensus 264 ~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 293 (524)
T 2ec8_A 264 HGDFNYERQATLTISSARVNDSGVFMCYAN 293 (524)
T ss_dssp CSSSCEEEEEEEEESSCCTTTCEEEEEEEE
T ss_pred ccCCccceEEEEEECCCCHHHCEEEEEEEE
Confidence 1124577788889999999999874
No 28
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.96 E-value=3.2e-27 Score=180.63 Aligned_cols=221 Identities=18% Similarity=0.352 Sum_probs=154.4
Q ss_pred cCCCeeecCCCcceEe---ecCCeEEEEEEecCCCCCeEEEEeCcEee--------------------------eeEEEE
Q psy15206 10 DTPPVILNNSTQLSVA---KEGQSVQLECHAEGHPIPTISWRRNFKRL--------------------------GRLHLA 60 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~---~~G~~v~l~C~~~~~p~~~~~W~~~~~~~--------------------------~~~~~~ 60 (232)
..+|.|+.. |.+..+ .+|++++|.|.+.|.|.+.|+|+|++..+ |.|+|.
T Consensus 3 ~~~P~f~~~-P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~ 81 (384)
T 3kld_A 3 GSGPVFVQE-PSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCI 81 (384)
T ss_dssp CEEEEEEEC-CCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEE
T ss_pred CCCCEEEeC-CcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEE
Confidence 347889888 777766 68999999999999999999999965432 355555
Q ss_pred eeee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeeec-cCCCCeEEEEeCCeeeCCCCcEEe--eCCeEEE
Q psy15206 61 IPYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAE-GHPIPTISWRRENNAILPNGQTIF--TGSTLQI 130 (232)
Q Consensus 61 ~~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~~~--~~~~l~i 130 (232)
.... ...+.+...+.+.........+.+|+.+.|.|... +.+.+.+.|++++..+....+... ..+.|.|
T Consensus 82 A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I 161 (384)
T 3kld_A 82 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYI 161 (384)
T ss_dssp EEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEE
T ss_pred EEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEE
Confidence 5322 22333332222222223446778899999999764 356678999999987654444332 3467999
Q ss_pred CCCCCCCCeEEEEEeEeCCCCcee--eEEEEEEE-------eccEEEe-ccceeeeeccCeEEEEEEeecCCCCeEEEee
Q psy15206 131 PRITKEDRGAYYCVAQNGIGRGAR--RKIEVKVE-------FAPIVTV-QSTRIGQALHHDMDLDCHIEAYPHPILYWAK 200 (232)
Q Consensus 131 ~~~~~~~~g~y~C~~~~~~~~~~~--~~~~l~v~-------~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~ 200 (232)
.++..+|.|.|+|.+.|..+.... ....+.+. ..|.+.. .+....+..|+.+.|.|.+.|.|.|.+.|+|
T Consensus 162 ~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k 241 (384)
T 3kld_A 162 AKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRR 241 (384)
T ss_dssp SSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEE
T ss_pred eecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEe
Confidence 999999999999999997654211 11111111 2344433 3556678899999999999999999999999
Q ss_pred C-CEEecCC-----CeEEEEEeccccCCceEEEEecC
Q psy15206 201 D-GEIVVND-----EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 201 ~-g~~~~~~-----~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+ +..+... ....|.+.++..+|+|.|+|.|.
T Consensus 242 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 278 (384)
T 3kld_A 242 ADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAE 278 (384)
T ss_dssp TTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEE
T ss_pred CCCccccccceecCCCcEEEECCCChhhCEEEEEEEE
Confidence 5 4344322 23468888899999999999873
No 29
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.96 E-value=2.2e-27 Score=176.77 Aligned_cols=212 Identities=17% Similarity=0.288 Sum_probs=153.0
Q ss_pred CcceEeecCCeEEEEEEecCCC-CCeEEEEeCcEe---------------------------eeeEEEEeeee------c
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP-IPTISWRRNFKR---------------------------LGRLHLAIPYT------S 65 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p-~~~~~W~~~~~~---------------------------~~~~~~~~~~~------~ 65 (232)
...+.+.+|++++|.|.+.+.+ .+.+.|+|++.. .|.|.|..... .
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (315)
T 1itb_B 12 KIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 91 (315)
T ss_dssp CCCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEE
T ss_pred ceEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEE
Confidence 4567899999999999999876 789999996531 13566655322 1
Q ss_pred Cceeec-CCcEEecC--CCCceEeecCCcEEEEeee------ccCCCCeEEEEeCCeeeCCC-CcEEeeCCeEEECCCCC
Q psy15206 66 PEAQVD-TPPVILNN--SPQLSVAKEGQSVQLECHA------EGHPIPTISWRRENNAILPN-GQTIFTGSTLQIPRITK 135 (232)
Q Consensus 66 ~~l~v~-~~p~~~~~--~~~~~~~~~g~~~~l~C~~------~~~~~~~~~W~~~~~~~~~~-~~~~~~~~~l~i~~~~~ 135 (232)
+.+.+. .+|.+... ......+..|+.+.|.|.+ .+.|.+.+.|++++..+... .+.....+.|.|.++..
T Consensus 92 ~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~ 171 (315)
T 1itb_B 92 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAE 171 (315)
T ss_dssp CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCG
T ss_pred EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEecee
Confidence 122211 11211100 0112457789999999998 78888999999999887542 34455677999999999
Q ss_pred CCCeEEEEEeE-eCCCCce--eeEEEEEEE-----eccEEEeccce-eeeeccCeEEEEEEeecCCCCeEEEeeCCEEec
Q psy15206 136 EDRGAYYCVAQ-NGIGRGA--RRKIEVKVE-----FAPIVTVQSTR-IGQALHHDMDLDCHIEAYPHPILYWAKDGEIVV 206 (232)
Q Consensus 136 ~~~g~y~C~~~-~~~~~~~--~~~~~l~v~-----~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~ 206 (232)
+|.|.|+|.+. +..+... ...+.+.+. .+|.+...+.. ..+..|+.+.|.|.+.|.|.|.+.|+++|..+.
T Consensus 172 ~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~ 251 (315)
T 1itb_B 172 KHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVID 251 (315)
T ss_dssp GGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECC
T ss_pred hhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECC
Confidence 99999999999 6666532 233344343 46666554443 467889999999999999999999999999876
Q ss_pred CCC---------------------eEEEEEeccccCC-ceEEEEecC
Q psy15206 207 NDE---------------------YHSISNFGTSEGT-TGSLQCKVP 231 (232)
Q Consensus 207 ~~~---------------------~~~~~~~~~~~~d-~g~Y~C~~~ 231 (232)
... ...|.+.++..+| +|.|+|.|.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~ 298 (315)
T 1itb_B 252 EDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAK 298 (315)
T ss_dssp TTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEE
T ss_pred cccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEe
Confidence 533 1267788888899 999999973
No 30
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.96 E-value=7.8e-28 Score=200.07 Aligned_cols=222 Identities=22% Similarity=0.357 Sum_probs=169.8
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe-------------------------eeeEEEEe
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR-------------------------LGRLHLAI 61 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~-------------------------~~~~~~~~ 61 (232)
+.|..+|.+.. +....+.+|++++|.|.+.+.|.+.+.|++++.. .|.|+|..
T Consensus 522 l~V~~~p~~~~--~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a 599 (816)
T 3dmk_A 522 LNVYGLPYIRQ--MEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVA 599 (816)
T ss_dssp EEECSSCEECC--CCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCCHHHHCEEEEEEE
T ss_pred EEEecCCeeEc--cCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEEecCccccCEEEEEEE
Confidence 45667786643 4567789999999999999989889999995432 24677766
Q ss_pred eee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCC-eEEEEeCCeeeCCCCcEEe-----eCCeE
Q psy15206 62 PYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIP-TISWRRENNAILPNGQTIF-----TGSTL 128 (232)
Q Consensus 62 ~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~~-----~~~~l 128 (232)
... .+.+.+..+|...........+..|+.+.|.|.+.+.+.+ .+.|++++..+........ ..+.|
T Consensus 600 ~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L 679 (816)
T 3dmk_A 600 KNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVL 679 (816)
T ss_dssp EESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEE
T ss_pred EECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEE
Confidence 332 3455666666554433444567789999999999765554 8999999987643322211 13479
Q ss_pred EECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEec--
Q psy15206 129 QIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVV-- 206 (232)
Q Consensus 129 ~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~-- 206 (232)
.|.++..+|.|.|+|.+.|..|. ....+.+.|..+|.+...+.+..+..|+.+.|.|.+.|.|.|.+.|+|++..+.
T Consensus 680 ~i~~v~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~ 758 (816)
T 3dmk_A 680 TIEAVEASHAGNFTCHARNLAGH-QQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGE 758 (816)
T ss_dssp EEESCCGGGCEEEEEEEECSSCE-EEEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTC
T ss_pred EEccCChhhCEEEEEEEEeCCcc-EEEEEEEEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCcc
Confidence 99999999999999999998877 567778889999999888888888899999999999999999999999764322
Q ss_pred -----CCCe-----EEEEEeccccCCceEEEEecC
Q psy15206 207 -----NDEY-----HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 -----~~~~-----~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
...+ -.|.+.++...|+|.|+|.|.
T Consensus 759 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 793 (816)
T 3dmk_A 759 YKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAI 793 (816)
T ss_dssp CBCCCCBTTEEEETTEEEECSCCGGGCEEEEEEEE
T ss_pred ccccccCCCEEecCCEEEECcCChhhCeEEEEEEE
Confidence 1111 157778888999999999984
No 31
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.96 E-value=1.9e-27 Score=178.28 Aligned_cols=210 Identities=15% Similarity=0.232 Sum_probs=154.0
Q ss_pred CcceEeecCCeEEEEEEecCC---------CCCeEEEEeCcE----------------------eee-eEEEEeeeec--
Q psy15206 20 TQLSVAKEGQSVQLECHAEGH---------PIPTISWRRNFK----------------------RLG-RLHLAIPYTS-- 65 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~---------p~~~~~W~~~~~----------------------~~~-~~~~~~~~~~-- 65 (232)
..++.+.+|++++|.|.+.+. |.+.+.|+|++. +.| .|.|......
T Consensus 36 ~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~ 115 (329)
T 3oq3_B 36 TMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGD 115 (329)
T ss_dssp EEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSC
T ss_pred cceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCc
Confidence 467789999999999999873 568999999542 336 7888774321
Q ss_pred -----CceeecCCcEEecCCCCceEeecCCcEEEEeeeccCC-CCeEEEEeCCeeeCC-CCcEEeeCCeEEECCCCCCCC
Q psy15206 66 -----PEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHP-IPTISWRRENNAILP-NGQTIFTGSTLQIPRITKEDR 138 (232)
Q Consensus 66 -----~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~W~~~~~~~~~-~~~~~~~~~~l~i~~~~~~~~ 138 (232)
+.+.+..+|.... ......+.+|+.+.|.|.+.+.| .+.+.|++++..+.. ..++...++.|.|.++..+|.
T Consensus 116 ~~~~~~~~v~~~~p~~~~-~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~ 194 (329)
T 3oq3_B 116 CVQGIVRSHIRKPPSCIP-ETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDS 194 (329)
T ss_dssp EEEEEEEEEECCCCSCEE-EEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECSCCGGGC
T ss_pred eeeEEEEEEEcCCCcEec-cccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEeecChhhC
Confidence 1122223332221 11112345699999999999988 889999999988752 334444578999999999999
Q ss_pred eEEEEEeEeC--CCCc---eeeEEEEEEEecc----EEEeccceeeeeccCeEEEEEEeecCC---CC-eEEEeeCCEEe
Q psy15206 139 GAYYCVAQNG--IGRG---ARRKIEVKVEFAP----IVTVQSTRIGQALHHDMDLDCHIEAYP---HP-ILYWAKDGEIV 205 (232)
Q Consensus 139 g~y~C~~~~~--~~~~---~~~~~~l~v~~~p----~~~~~~~~~~~~~g~~~~l~C~~~~~p---~~-~~~W~~~g~~~ 205 (232)
|.|+|.+.|. .+.. ....+.+.|..+| .+. .+....+..|+.+.|.|.+.|.| .+ .+.|+++|..+
T Consensus 195 G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i 273 (329)
T 3oq3_B 195 GRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWI 273 (329)
T ss_dssp EEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCB
T ss_pred EEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeee
Confidence 9999999986 4431 2234667777666 334 66677888999999999999998 77 89999998764
Q ss_pred -cCC-------------CeEEEEEeccccCCce-EEEEecC
Q psy15206 206 -VND-------------EYHSISNFGTSEGTTG-SLQCKVP 231 (232)
Q Consensus 206 -~~~-------------~~~~~~~~~~~~~d~g-~Y~C~~~ 231 (232)
..+ ....|.+.++..+|+| .|+|.|.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~ 314 (329)
T 3oq3_B 274 IGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGH 314 (329)
T ss_dssp CCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEE
T ss_pred eccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEE
Confidence 222 2456778888999999 9999974
No 32
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=5.8e-28 Score=181.09 Aligned_cols=223 Identities=16% Similarity=0.281 Sum_probs=155.1
Q ss_pred cccCCCeeecCCCcceEeecCCeEEEEEEecCC----CCCeEEEEeCcE-------------------------------
Q psy15206 8 QVDTPPVILNNSTQLSVAKEGQSVQLECHAEGH----PIPTISWRRNFK------------------------------- 52 (232)
Q Consensus 8 ~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~----p~~~~~W~~~~~------------------------------- 52 (232)
.+..+|.+....+.++.+.+|++++|.|.+.+. +.+.+.|++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~ 88 (331)
T 3u83_A 9 QMGRDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPS 88 (331)
T ss_dssp ------------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCS
T ss_pred ccCCCCcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccC
Confidence 345566666655788999999999999999875 455799999430
Q ss_pred --------------eeeeEEEEeee-------ecCceeecCCcEEec-CCCCceEeecC---CcEEEEee-eccCCCCeE
Q psy15206 53 --------------RLGRLHLAIPY-------TSPEAQVDTPPVILN-NSPQLSVAKEG---QSVQLECH-AEGHPIPTI 106 (232)
Q Consensus 53 --------------~~~~~~~~~~~-------~~~~l~v~~~p~~~~-~~~~~~~~~~g---~~~~l~C~-~~~~~~~~~ 106 (232)
+.|.|.|.... ..+.|.|..+|.... .......+.+| +.+.|.|. ..+.|.+.+
T Consensus 89 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i 168 (331)
T 3u83_A 89 FTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVV 168 (331)
T ss_dssp SSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEE
T ss_pred CCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceE
Confidence 11467776311 156677777666532 23455667777 77999998 778899999
Q ss_pred EEEeCCeeeC------CCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEecc-ceeeeecc
Q psy15206 107 SWRRENNAIL------PNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQS-TRIGQALH 179 (232)
Q Consensus 107 ~W~~~~~~~~------~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~~g 179 (232)
.|++++.... .........+.|.|..+...|.|.|+|.+.+..+. ....+.+.|..+|.+...+ ....+..|
T Consensus 169 ~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~-~~~~~~l~V~~~P~~~~~~~~~~~~~~g 247 (331)
T 3u83_A 169 SWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDR-FKESLTLNVQYEPEVTIEGFDGNWYLQR 247 (331)
T ss_dssp EEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEE-EEEEEECCEEEEEEEEEECCCSCCBTTC
T ss_pred EEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCc-ceeeEEEEEecCCeEEEecCCCceEeCC
Confidence 9999532211 11111222346888899999999999999998765 5677788888888876544 33457789
Q ss_pred CeEEEEEEeecCCCCe-EEEeeCCEEecCC---CeEEEEEe-ccccCCceEEEEecC
Q psy15206 180 HDMDLDCHIEAYPHPI-LYWAKDGEIVVND---EYHSISNF-GTSEGTTGSLQCKVP 231 (232)
Q Consensus 180 ~~~~l~C~~~~~p~~~-~~W~~~g~~~~~~---~~~~~~~~-~~~~~d~g~Y~C~~~ 231 (232)
+.+.|.|.+.|.|.+. +.|+++|..+... ....|.+. ++..+|+|.|+|.|.
T Consensus 248 ~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~L~i~~~v~~~d~G~Y~C~a~ 304 (331)
T 3u83_A 248 MDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYSLAGTYICEAT 304 (331)
T ss_dssp CCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECSCCCGGGCEEEEEEEE
T ss_pred CeEEEEEeCcCCCCCCEEEEEECCCcccccceecCcEEEEeCCCccccCeEEEEEEE
Confidence 9999999999999998 9999998876543 12356666 788899999999974
No 33
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.96 E-value=1.8e-27 Score=178.24 Aligned_cols=216 Identities=16% Similarity=0.268 Sum_probs=141.9
Q ss_pred CeeecCCCcceEeecCCeEEEEEEecCC-CCCeEEEEeCcEe--------------------------------------
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECHAEGH-PIPTISWRRNFKR-------------------------------------- 53 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~~~~~-p~~~~~W~~~~~~-------------------------------------- 53 (232)
..|+.. +.++.+.+|++++|.|.+.+. |.+.+.|+|++..
T Consensus 4 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 4 LQVIQP-DKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CCEECC-CSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred eEEEcC-CCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 345544 788999999999999999986 8889999996321
Q ss_pred ---eeeEEEEeeee-----------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCC--eEEEEeCCeeeCC
Q psy15206 54 ---LGRLHLAIPYT-----------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIP--TISWRRENNAILP 117 (232)
Q Consensus 54 ---~~~~~~~~~~~-----------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~~~W~~~~~~~~~ 117 (232)
.|.|.|..... ...|.|..+|...........+.+|+.+.|.|.+.+.+++ .+.|++++..+..
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccc
Confidence 13666665322 2356665443211111122456789999999999987765 8999999987653
Q ss_pred CCcE---------EeeCCeEEECCCCCCCCeEEEEEeEeCCCCc--eeeEEEE--EEEeccEEEeccceeeeeccCeEEE
Q psy15206 118 NGQT---------IFTGSTLQIPRITKEDRGAYYCVAQNGIGRG--ARRKIEV--KVEFAPIVTVQSTRIGQALHHDMDL 184 (232)
Q Consensus 118 ~~~~---------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~--~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l 184 (232)
.... ....+.|.|.....+|.|.|+|.+.|..+.. ......+ .+..+|.+...+.. +..|+.+.|
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l 240 (327)
T 2wng_A 163 FQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNV 240 (327)
T ss_dssp EEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEE
T ss_pred cccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEE
Confidence 2211 1112357777777777899999999976542 2223333 34567877665544 678999999
Q ss_pred EEEeecCCCC--eEEEeeCCEEecC----------CCeE----EEEEeccccCCceEEEEecC
Q psy15206 185 DCHIEAYPHP--ILYWAKDGEIVVN----------DEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 185 ~C~~~~~p~~--~~~W~~~g~~~~~----------~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|.+.|.+++ .+.|+|||..+.. +..+ .+.+..+..+|+|.|+|.|.
T Consensus 241 ~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~ 303 (327)
T 2wng_A 241 TCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVE 303 (327)
T ss_dssp EEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEE
T ss_pred EEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEE
Confidence 9999995444 7999999987642 2222 24555667789999999974
No 34
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.96 E-value=3.8e-27 Score=186.47 Aligned_cols=213 Identities=14% Similarity=0.161 Sum_probs=148.8
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEec-CCCCCeEEEEeCcEee-------------------------------
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHAE-GHPIPTISWRRNFKRL------------------------------- 54 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~-~~p~~~~~W~~~~~~~------------------------------- 54 (232)
+.|..+|.+ . +.+..+.+|++++|.|.+. +.|.+.|+|++++..+
T Consensus 224 l~V~~~p~~--~-p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 300 (527)
T 3qs9_E 224 IDLNQTPQT--T-LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARN 300 (527)
T ss_dssp EESSSCCCC--S-CCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGG
T ss_pred EEEeccCcc--C-CCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcc
Confidence 445566666 2 6788899999999999997 8899999999964321
Q ss_pred --eeEEEEeee---ecCceeecCCcEEecCC-CCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeE
Q psy15206 55 --GRLHLAIPY---TSPEAQVDTPPVILNNS-PQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTL 128 (232)
Q Consensus 55 --~~~~~~~~~---~~~~l~v~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l 128 (232)
|.|+|.... ..+.|.|..+|.+.... .....+.+|+.+.|.|.+.|.|.|.+.|+++|..+............|
T Consensus 301 DsG~Y~C~a~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L 380 (527)
T 3qs9_E 301 DTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSI 380 (527)
T ss_dssp GCEEEEEEETTEEEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEE
T ss_pred cCeEEEEEEEeCCCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEE
Confidence 345554422 25567776666554322 233566789999999999999999999999998875444333345689
Q ss_pred EECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC-
Q psy15206 129 QIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN- 207 (232)
Q Consensus 129 ~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~- 207 (232)
.|.++..+|+|.|+|.+.|..|. ....+.|.|..+|.+...+. ...|.|.+.|.|.|.|.|++++.....
T Consensus 381 ~I~~v~~~D~G~YtC~A~N~~g~-~~~~~~L~V~~~P~i~~~~~--------~~~l~C~a~g~P~p~i~W~~~~~~~~~~ 451 (527)
T 3qs9_E 381 SKFCNHKHQPGEYIFHAENDDAQ-FTKMFTLNIRRKPQVLAEAS--------ASQASCFSDGYPLPSWTWKKCSDKSPNC 451 (527)
T ss_dssp EEECCCTTCCSCEEEEEEETTEE-EEEEEEEC--CCCEEEECCC--------CE---EEEECSSCCEEEEECCC-----C
T ss_pred EEecCCcccCEEEEEEEEeCCCc-EEEEEEEEEecCCeEEEeCC--------CCEEEEEEEEEcCCeEEEEECCCCcCCC
Confidence 99999999999999999998886 55678888999998866542 235799999999999999987654310
Q ss_pred -------------------CCeEEEEEeccccCCceEEEEecC
Q psy15206 208 -------------------DEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 208 -------------------~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.......+.....+|+|.|.|.|.
T Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~ 494 (527)
T 3qs9_E 452 TEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAY 494 (527)
T ss_dssp CCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEE
T ss_pred ccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEE
Confidence 011222222333479999999984
No 35
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=1.4e-27 Score=183.14 Aligned_cols=221 Identities=20% Similarity=0.252 Sum_probs=155.0
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEecC-CCCCeEEEEeCcEe--------------------------eeeEEE
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHAEG-HPIPTISWRRNFKR--------------------------LGRLHL 59 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~-~p~~~~~W~~~~~~--------------------------~~~~~~ 59 (232)
+.|..+|.|... +.++.+.+|++++|.|.+.+ .|.+.+.|+|++.. .|.|+|
T Consensus 1 l~v~~~P~~~~~-p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 79 (395)
T 1bih_A 1 LPVDKYPVLKDQ-PAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQC 79 (395)
T ss_dssp ----CCCEECCC-CSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEE
T ss_pred CCcCCCCEeecC-CCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEE
Confidence 357789999988 88999999999999999998 88999999995432 247777
Q ss_pred Eeeee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCe--ee-CC----CCcE-Ee
Q psy15206 60 AIPYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENN--AI-LP----NGQT-IF 123 (232)
Q Consensus 60 ~~~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~--~~-~~----~~~~-~~ 123 (232)
..... .+.+.+...+.. ...+....+.+|+.+.|.|.+ .+.|.+.+.|++++. .. .. ..+. ..
T Consensus 80 ~a~n~~g~~~s~~~~l~v~~~~~p-~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 158 (395)
T 1bih_A 80 FAETPAGVASSRVISFRKTYLIAS-PAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAG 158 (395)
T ss_dssp EEEETTEEEECCCEEEEEEEEECC-CCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEEC
T ss_pred EEEeCCCeEEeEEEEEEEEEeecC-CcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEc
Confidence 76332 233333221110 011234456689999999996 678889999999862 11 11 1222 23
Q ss_pred eCCeEEECCCCCCCCe---EEEEEeEeCCCCceeeEEEEEEE------------eccEEEeccceeeeeccCeEEEEEEe
Q psy15206 124 TGSTLQIPRITKEDRG---AYYCVAQNGIGRGARRKIEVKVE------------FAPIVTVQSTRIGQALHHDMDLDCHI 188 (232)
Q Consensus 124 ~~~~l~i~~~~~~~~g---~y~C~~~~~~~~~~~~~~~l~v~------------~~p~~~~~~~~~~~~~g~~~~l~C~~ 188 (232)
.++.|.|.++...|.| .|+|.+.+..+..........+. .+|.+ .+....+..|+.+.|.|.+
T Consensus 159 ~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~ 236 (395)
T 1bih_A 159 PDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMY 236 (395)
T ss_dssp TTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEE
T ss_pred CCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEEe
Confidence 4568999999999999 99999999876633221111111 12222 3455678899999999999
Q ss_pred ecCCCCeEEEeeCCEEecCCC--e---------EEEEEeccccCCceEEEEecC
Q psy15206 189 EAYPHPILYWAKDGEIVVNDE--Y---------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 189 ~~~p~~~~~W~~~g~~~~~~~--~---------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|.|.+.+.|+|+|..+.... + ..|.+.++...|+|.|+|.|.
T Consensus 237 ~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 290 (395)
T 1bih_A 237 GSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVD 290 (395)
T ss_dssp ECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEEC
T ss_pred ccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEE
Confidence 999999999999998875321 1 268888889999999999975
No 36
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.95 E-value=1.8e-26 Score=191.91 Aligned_cols=221 Identities=23% Similarity=0.422 Sum_probs=170.0
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee-----------------eeEEEEeeee-----
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL-----------------GRLHLAIPYT----- 64 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~-----------------~~~~~~~~~~----- 64 (232)
+.|..+|.+... +.+..+.+|++++|.|.+.+.|.+.+.|++++..+ |.|+|.....
T Consensus 338 l~V~~~~~~~~~-~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 416 (816)
T 3dmk_A 338 LTVTAPLSAKID-PPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAE 416 (816)
T ss_dssp EEECEEEEEEEE-SSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred EEEcCCCceeeC-CCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCCCEEEEcCCCHHHCEEEEEEEECCCCcEE
Confidence 455667777766 77888999999999999999999999999965443 5788876332
Q ss_pred -cCceeec---CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee-----C----CeEEEC
Q psy15206 65 -SPEAQVD---TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT-----G----STLQIP 131 (232)
Q Consensus 65 -~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~-----~----~~l~i~ 131 (232)
...+.+. .+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+......... + +.|.|.
T Consensus 417 ~~~~l~v~~~~~~p~i~~-~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~ 495 (816)
T 3dmk_A 417 ASAELKLGGRFDPPVIRQ-AFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNIT 495 (816)
T ss_dssp ECCEEECCCSSCCCEEEE-ECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEES
T ss_pred EEEEEEEccccCCCceEe-cCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEe
Confidence 4445542 3444443 345567788999999999999999999999999887655443321 1 259999
Q ss_pred CCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeE
Q psy15206 132 RITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYH 211 (232)
Q Consensus 132 ~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~ 211 (232)
++..+|.|.|+|.+.|..|. ......+.|..+|.+.. +....+..|+.+.|.|.+.+.|.+.+.|+|+|..+....+.
T Consensus 496 ~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~-~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~ 573 (816)
T 3dmk_A 496 SVHANDGGLYKCIAKSKVGV-AEHSAKLNVYGLPYIRQ-MEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQ 573 (816)
T ss_dssp SCCTTTCEEEEEEEEETTEE-EEEEEEEEECSSCEECC-CCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTE
T ss_pred eccccCCEEEEEEEEECCCe-EEEEEEEEEecCCeeEc-cCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCce
Confidence 99999999999999998776 55677888888876543 44456788999999999999998899999999887644322
Q ss_pred ------EEEEeccc-cCCceEEEEecC
Q psy15206 212 ------SISNFGTS-EGTTGSLQCKVP 231 (232)
Q Consensus 212 ------~~~~~~~~-~~d~g~Y~C~~~ 231 (232)
.+.+.++. ..|+|.|+|.|.
T Consensus 574 ~~~~~~~l~i~~v~~~~d~G~Y~C~a~ 600 (816)
T 3dmk_A 574 KVFPNGTLIIENVERNSDQATYTCVAK 600 (816)
T ss_dssp EECTTSEEEESSCCHHHHCEEEEEEEE
T ss_pred EEecCCeEEEEecCccccCEEEEEEEE
Confidence 45666665 589999999874
No 37
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.95 E-value=1.3e-28 Score=184.84 Aligned_cols=211 Identities=23% Similarity=0.418 Sum_probs=115.6
Q ss_pred CcceEeecCCeEEEEEEecCC-CCCeEEEEeCcEee-----------------------eeEEEEeeee-----cCceee
Q psy15206 20 TQLSVAKEGQSVQLECHAEGH-PIPTISWRRNFKRL-----------------------GRLHLAIPYT-----SPEAQV 70 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~-p~~~~~W~~~~~~~-----------------------~~~~~~~~~~-----~~~l~v 70 (232)
+.+..+.+|++++|.|.+.+. |.+.+.|++++..+ |.|.|..... .+.|.|
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~~~l~V 94 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRV 94 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeCCeEEEEEEEEE
Confidence 678889999999999999975 57899999964322 4566654221 334444
Q ss_pred cCCc----------------------EEec---CCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcE----
Q psy15206 71 DTPP----------------------VILN---NSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQT---- 121 (232)
Q Consensus 71 ~~~p----------------------~~~~---~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~---- 121 (232)
...+ .+.. .......+..|+.+.|.|.+.|.|.+.+.|++++..+......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~ 174 (334)
T 1ry7_B 95 TDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIK 174 (334)
T ss_dssp ------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCC
T ss_pred eccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECccccccccee
Confidence 3322 1111 0112356778999999999999998999999998876543221
Q ss_pred -EeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEec----cEEEe-ccceeeeeccCeEEEEEEeecCCCCe
Q psy15206 122 -IFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFA----PIVTV-QSTRIGQALHHDMDLDCHIEAYPHPI 195 (232)
Q Consensus 122 -~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~----p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~ 195 (232)
......|.|.++...|.|.|+|.+.+..+. ....+.+.|... |.+.. .+....+..|+.+.|.|.+.|.|.+.
T Consensus 175 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~ 253 (334)
T 1ry7_B 175 LRHQQWSLVMESVVPSDRGNYTCVVENKFGS-IRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPH 253 (334)
T ss_dssp CCTTTTEEEECSCCGGGCCCEEEEEEETTEE-EEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEE
T ss_pred cccceEEEEECCCCcccCEEEEEEEEeCCCC-EEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCe
Confidence 123458999999999999999999998766 556677777652 33332 24566788999999999999999999
Q ss_pred EEEee----CCEEecCCCe------------------EEEEEeccccCCceEEEEecC
Q psy15206 196 LYWAK----DGEIVVNDEY------------------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 196 ~~W~~----~g~~~~~~~~------------------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|+| +|..+..+.. ..|.+.++...|+|.|+|.|.
T Consensus 254 v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 311 (334)
T 1ry7_B 254 IQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAG 311 (334)
T ss_dssp EEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEE
T ss_pred EEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEe
Confidence 99999 5655432211 267888889999999999974
No 38
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.95 E-value=4.9e-27 Score=179.38 Aligned_cols=220 Identities=17% Similarity=0.277 Sum_probs=159.1
Q ss_pred CCCeeecCCCcceEe---ecCCeEEEEEEecCCCCCeEEEEeCcEe--------------------------eeeEEEEe
Q psy15206 11 TPPVILNNSTQLSVA---KEGQSVQLECHAEGHPIPTISWRRNFKR--------------------------LGRLHLAI 61 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~---~~G~~v~l~C~~~~~p~~~~~W~~~~~~--------------------------~~~~~~~~ 61 (232)
.+|.|+.. |.+..+ .+|++++|.|.+.+.|.+.+.|+|++.. .|.|+|..
T Consensus 3 ~~P~~~~~-p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a 81 (382)
T 1cs6_A 3 YGPVFEEQ-PAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVA 81 (382)
T ss_dssp EEEEEEEC-CCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEE
T ss_pred CCCEEEEC-CCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCCeEEEecccccccCEEEEEEE
Confidence 58999988 777776 7999999999999989999999995432 24666665
Q ss_pred eee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCeeeC--CCCcEEe--eCCeEE
Q psy15206 62 PYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENNAIL--PNGQTIF--TGSTLQ 129 (232)
Q Consensus 62 ~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~--~~~~~~~--~~~~l~ 129 (232)
... ...|.+...+.+.........+.+|+.+.|.|.+ .+.|.+.+.|++++..+. ...+... ..+.|.
T Consensus 82 ~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~ 161 (382)
T 1cs6_A 82 TNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLY 161 (382)
T ss_dssp EETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEE
T ss_pred EcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEE
Confidence 322 3445554433333323455678899999999996 456778999999987642 2222222 236899
Q ss_pred ECCCCCCCCeEEEEEeEeCCCCce----eeEEEEEEE------eccEEEec-cceeeeeccCeEEEEEEeecCCCCeEEE
Q psy15206 130 IPRITKEDRGAYYCVAQNGIGRGA----RRKIEVKVE------FAPIVTVQ-STRIGQALHHDMDLDCHIEAYPHPILYW 198 (232)
Q Consensus 130 i~~~~~~~~g~y~C~~~~~~~~~~----~~~~~l~v~------~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~~~~W 198 (232)
|.++...|.|.|+|.+.+..+... .....+.+. .+|.+... +....+..|+.+.|.|.+.|.|.+.+.|
T Consensus 162 i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W 241 (382)
T 1cs6_A 162 IAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKW 241 (382)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEE
T ss_pred EEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEE
Confidence 999999999999999998654311 122334332 24555443 5567788999999999999999999999
Q ss_pred eeCCEEecC---CCeEEEEEeccccCCceEEEEecC
Q psy15206 199 AKDGEIVVN---DEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 199 ~~~g~~~~~---~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
++++..+.. .....+.+.++...|+|.|+|.|.
T Consensus 242 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 277 (382)
T 1cs6_A 242 RKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAE 277 (382)
T ss_dssp EECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEE
T ss_pred EECCcccccEEecCCcEEEEccCChhhCEEEEEEEE
Confidence 998876542 244577788889999999999873
No 39
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.95 E-value=1.2e-26 Score=172.50 Aligned_cols=208 Identities=14% Similarity=0.171 Sum_probs=146.9
Q ss_pred CcceEeecCCeEEEEEEec-CCCCCeEEEEeCcEee---------------------------eeEEEEeeee-----cC
Q psy15206 20 TQLSVAKEGQSVQLECHAE-GHPIPTISWRRNFKRL---------------------------GRLHLAIPYT-----SP 66 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~-~~p~~~~~W~~~~~~~---------------------------~~~~~~~~~~-----~~ 66 (232)
...+.+.+|+.++|.|... +.|.+.+.|+|++..+ |.|+|..... ..
T Consensus 8 ~~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~ 87 (312)
T 2y23_A 8 EVVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSY 87 (312)
T ss_dssp CCEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEE
T ss_pred ceeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEE
Confidence 3456788999999999886 5788999999965432 3455544221 22
Q ss_pred ceeecC------------CcEEecCCCCceEeecCCcEEEEeeec-cCCCCeEEEEeCCeeeCCCCcEEeeC------Ce
Q psy15206 67 EAQVDT------------PPVILNNSPQLSVAKEGQSVQLECHAE-GHPIPTISWRRENNAILPNGQTIFTG------ST 127 (232)
Q Consensus 67 ~l~v~~------------~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~------~~ 127 (232)
.+.+.. +|.+.........+.+|+.+.|.|.+. +.|.+.+.|++++..+....+..... ..
T Consensus 88 ~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~ 167 (312)
T 2y23_A 88 LIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIE 167 (312)
T ss_dssp EECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEE
T ss_pred EEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEE
Confidence 233321 333222112256777899999999998 78889999999999886654433321 23
Q ss_pred EEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEE---------------------EeccEEEeccceeeeeccCeEEEEE
Q psy15206 128 LQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKV---------------------EFAPIVTVQSTRIGQALHHDMDLDC 186 (232)
Q Consensus 128 l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v---------------------~~~p~~~~~~~~~~~~~g~~~~l~C 186 (232)
|.|.++..+|.|.|+|.+.+.... ....+.+ ..+|.+.. +....+..|+.+.|.|
T Consensus 168 L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~v~~G~~~~l~C 243 (312)
T 2y23_A 168 MFMEKLQDEDEGTYTFQLQDGKAT---NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE-YLSWEVTGECNVLLKC 243 (312)
T ss_dssp EEESCCCGGGCEEEEEEEESSSCE---EEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEE-EEEEEEETTTEEEEEE
T ss_pred EEEccCCcccCEeEEEEEEeCCce---EEEEEEEcchhhhhhcccccccccchhhccCCceee-cceEEEeCCCEEEEEE
Confidence 999999999999999999764332 2222222 12355443 2236778999999999
Q ss_pred EeecCCCC-eEEEeeCCEEecC-------CCeEEEEEeccccCCceEEEEecC
Q psy15206 187 HIEAYPHP-ILYWAKDGEIVVN-------DEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 187 ~~~~~p~~-~~~W~~~g~~~~~-------~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+.+.|.+ .+.|+|+|..+.. .....|.+.++..+|+|.|+|.|.
T Consensus 244 ~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 296 (312)
T 2y23_A 244 KVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILK 296 (312)
T ss_dssp EEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEE
T ss_pred EEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEE
Confidence 99999988 9999999988762 234678888899999999999973
No 40
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=6e-27 Score=170.41 Aligned_cols=202 Identities=19% Similarity=0.335 Sum_probs=147.2
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecC-CCCC--eEEEEeCcEee------------------------e--eEEEEe
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEG-HPIP--TISWRRNFKRL------------------------G--RLHLAI 61 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~-~p~~--~~~W~~~~~~~------------------------~--~~~~~~ 61 (232)
.+|.|... ..+.+|++++|.|.+.+ .|.+ .+.|++++..+ | +|.|..
T Consensus 5 ~~p~~~~~----~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a 80 (265)
T 2oz4_A 5 TPPQLVSP----RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAV 80 (265)
T ss_dssp SCCEEECC----SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEE
T ss_pred CCCccccC----ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEE
Confidence 46777633 47899999999999998 7765 99999964332 1 366665
Q ss_pred eee------cCceeecC--CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCC
Q psy15206 62 PYT------SPEAQVDT--PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRI 133 (232)
Q Consensus 62 ~~~------~~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~ 133 (232)
... ...|.|.. +|.+. .....+.+|+.+.|.|.+. |.+.+.| +|..+.... ..+.|.|..+
T Consensus 81 ~n~~~~~~~~~~l~V~~~p~p~~~---~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~----~~~~l~i~~~ 149 (265)
T 2oz4_A 81 ILGNQSQETLQTVTIYSFPAPNVI---LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG----PRAQLLLKAT 149 (265)
T ss_dssp EETTEEEEEEEEEEEECCCCCEEE---ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS----SEECCEEECC
T ss_pred ecCCCCcEEEEEEEEeCCCCceee---cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC----CcEEEEEccc
Confidence 332 45666654 23332 2334577899999999997 7889999 676653222 1245778899
Q ss_pred CCCCCeEEEEEeEeCC-CCce--eeEEEEEEEeccEEEec--cceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC
Q psy15206 134 TKEDRGAYYCVAQNGI-GRGA--RRKIEVKVEFAPIVTVQ--STRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND 208 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~-~~~~--~~~~~l~v~~~p~~~~~--~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~ 208 (232)
..+|.|.|+|.+.+.. |... ...+.+.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+...
T Consensus 150 ~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~ 229 (265)
T 2oz4_A 150 PEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPI 229 (265)
T ss_dssp GGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCT
T ss_pred cccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCC
Confidence 9999999999998643 5422 26677888888877554 34667889999999999999999999999999854444
Q ss_pred CeEEEEEeccccCCceEEEEecC
Q psy15206 209 EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.... .+..+|+|.|+|.|.
T Consensus 230 g~~~----~v~~~d~G~Y~C~a~ 248 (265)
T 2oz4_A 230 GESV----TVTRDLEGTYLCRAR 248 (265)
T ss_dssp TSCE----ECCGGGCEEEEEEEE
T ss_pred CcEE----EeehhhCeEEEEEEE
Confidence 4332 266799999999974
No 41
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=1.1e-26 Score=173.14 Aligned_cols=215 Identities=14% Similarity=0.187 Sum_probs=144.4
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe-----------------------eeeEEEEeee
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR-----------------------LGRLHLAIPY 63 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~-----------------------~~~~~~~~~~ 63 (232)
..+..+|.|... |. ..+.+|++++|.|.+.+. .+.+.|+|++.. .|.|.|....
T Consensus 19 ~~~~~~P~i~~~-p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 95 (316)
T 3vh8_G 19 MGGQDKPFLSAW-PS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSH 95 (316)
T ss_dssp -----CCEEEEE-SC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBC
T ss_pred cCCCCCCEeecc-CC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEc
Confidence 345679999988 55 578899999999999987 678999995432 2588887532
Q ss_pred -----------ecCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcE-E----ee
Q psy15206 64 -----------TSPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQT-I----FT 124 (232)
Q Consensus 64 -----------~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~-~----~~ 124 (232)
..+.|.|.. +|.+.. .+.. .+.+|+.+.|.|.+. .+.+.+.|++++..+...... . ..
T Consensus 96 ~~~~~~~~~~s~~~~l~V~~~~~~p~~~~-~~~~-~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~ 172 (316)
T 3vh8_G 96 PHSPTGWSAPSNPVVIMVTGNHRKPSLLA-HPGP-LVKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVS 172 (316)
T ss_dssp SSSSSSBCCCCCCEEEEEECSSCCCEEEE-ESCS-EEETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEE
T ss_pred CCCCcceecCCCcEEEEEecCCCCCeEEe-cCCC-ccCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCc
Confidence 133455532 233332 2332 377899999999995 456689999998765322111 0 13
Q ss_pred CCeEEECCCCCCCCeEEEEEeEeCCCCc----eeeEEEEEEE---eccEEEeccceeeeeccCeEEEEEEeecCCCCeEE
Q psy15206 125 GSTLQIPRITKEDRGAYYCVAQNGIGRG----ARRKIEVKVE---FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILY 197 (232)
Q Consensus 125 ~~~l~i~~~~~~~~g~y~C~~~~~~~~~----~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~ 197 (232)
...|.|.++..+|.|.|+|.+.|..+.. .+..+.+.|. .+|.+...+.. .+..|+.++|.|.+. .|.+.+.
T Consensus 173 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~-~v~~G~~v~L~C~~~-~~~~~~~ 250 (316)
T 3vh8_G 173 KANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGP-KVQAGESVTLSCSSR-SSYDMYH 250 (316)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCS-CCCTTSCCEEEEEES-SCCSEEE
T ss_pred eEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCC-eecCCCcEEEEEECC-CCCcEEE
Confidence 4579999999999999999999876531 2445566665 35566655543 567899999999996 4778999
Q ss_pred EeeCCEEecC--------C--CeEEEEEeccccCCceEEEEecC
Q psy15206 198 WAKDGEIVVN--------D--EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 198 W~~~g~~~~~--------~--~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
|+|+|..+.. . ....+.+.+++ |+|.|+|.+.
T Consensus 251 W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~ 292 (316)
T 3vh8_G 251 LSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGS 292 (316)
T ss_dssp EEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEE
T ss_pred EEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEee
Confidence 9999865431 1 12467777777 9999999874
No 42
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.95 E-value=3.9e-27 Score=178.86 Aligned_cols=190 Identities=15% Similarity=0.150 Sum_probs=143.1
Q ss_pred ceEeecCCeEEEEEEecCCCCCeEEEEeCcE-----------------eeeeEEEEeeee------cCceeecCCcEEec
Q psy15206 22 LSVAKEGQSVQLECHAEGHPIPTISWRRNFK-----------------RLGRLHLAIPYT------SPEAQVDTPPVILN 78 (232)
Q Consensus 22 ~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~-----------------~~~~~~~~~~~~------~~~l~v~~~p~~~~ 78 (232)
...+.+|++++|.|.+.+.|.+.+.|++++. +.|.|.|..... .+.+.|..+|.
T Consensus 105 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~--- 181 (363)
T 1wio_A 105 DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK--- 181 (363)
T ss_dssp CSSEESBSCEEEEEECCTTCCCCEEEECSSSCEEEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSC---
T ss_pred ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCC---
Confidence 3467899999999999998999999999642 225777776432 44444443332
Q ss_pred CCCCceEeecCCcEEEEeeecc-----CCCCeEEEEeCCeeeCC--------CCcEEe------------e--CCeEEEC
Q psy15206 79 NSPQLSVAKEGQSVQLECHAEG-----HPIPTISWRRENNAILP--------NGQTIF------------T--GSTLQIP 131 (232)
Q Consensus 79 ~~~~~~~~~~g~~~~l~C~~~~-----~~~~~~~W~~~~~~~~~--------~~~~~~------------~--~~~l~i~ 131 (232)
.+....+.+|+.+.|.|.+.+ .|.+.+.|+++|..+.. ...... . ...|.|.
T Consensus 182 -~~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 260 (363)
T 1wio_A 182 -ASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLP 260 (363)
T ss_dssp -SEEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEES
T ss_pred -CCCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEc
Confidence 123456778999999998877 67788999999877654 223222 1 3389999
Q ss_pred CCCCCCCeEEEEEeEeC--CCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCe--EEEeeCCEEecC
Q psy15206 132 RITKEDRGAYYCVAQNG--IGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPI--LYWAKDGEIVVN 207 (232)
Q Consensus 132 ~~~~~~~g~y~C~~~~~--~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~--~~W~~~g~~~~~ 207 (232)
++..+|.|.|+|.+.|. .|. ....+.+.|.. ..|+.+.|.|.+.|.|.|. +.|+|+|..+..
T Consensus 261 ~v~~~d~G~Y~C~a~n~~~~g~-~~~~~~l~V~~-------------v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~ 326 (363)
T 1wio_A 261 QALPQYAGSGNLTLALEAKTGK-LHQEVNLVVMR-------------ATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV 326 (363)
T ss_dssp SBCGGGCEEEEEEECBTTTTCC-EEEEEEEEEEE-------------ECCCSSSEEEEEESSCCTTCCEEEECSSSSCSE
T ss_pred cCCcCcCcEEEEEEEEhhhcCe-EEEEEeEEEEE-------------ecCCCeeEEEEEccccCCCccEEEEeCCCceee
Confidence 99999999999999998 775 55666666651 1288899999999999988 999999987765
Q ss_pred CCeEEEEEeccccCCceEEEEecC
Q psy15206 208 DEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 208 ~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.++ .+.++..+|+|.|+|.|+
T Consensus 327 ~~~l--~i~~v~~~d~G~Y~C~a~ 348 (363)
T 1wio_A 327 SKRE--KAVWVLNPEAGMWQCLLS 348 (363)
T ss_dssp EESS--SEEEESSCCSEEEEEEEC
T ss_pred eeee--eeeeeccccceeEEEEEe
Confidence 4443 446678899999999985
No 43
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.95 E-value=1.6e-26 Score=172.13 Aligned_cols=211 Identities=15% Similarity=0.170 Sum_probs=150.0
Q ss_pred CcceEeecCCeEEEEEEecCCCCC-----eEEEEeCcEe-----------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIP-----TISWRRNFKR----------------------------------------- 53 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~-----~~~W~~~~~~----------------------------------------- 53 (232)
|.++.+..|++++|.|.+.+.+.+ ++.|+|++..
T Consensus 7 P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 86 (313)
T 4fqp_A 7 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGL 86 (313)
T ss_dssp CSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSC
T ss_pred CCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcC
Confidence 677888999999999999875543 5899985321
Q ss_pred ----eeeEEEEeee-------ecCceeecCCcEEecCCCCceEeecCCcEEEEeeec-cCCCCeEEEEeCCeeeCCCCcE
Q psy15206 54 ----LGRLHLAIPY-------TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAE-GHPIPTISWRRENNAILPNGQT 121 (232)
Q Consensus 54 ----~~~~~~~~~~-------~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~ 121 (232)
.|.|.|.... ..+.|.+..+|.... ......+..++.+.+.|.+. +.|.+.+.|++++..+......
T Consensus 87 ~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~-~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~ 165 (313)
T 4fqp_A 87 RVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTA-EVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQV 165 (313)
T ss_dssp CGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEE-EECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEE
T ss_pred ChhhCEEEEEEEeeccCcceeeeeeeeeccCCccee-cccceEeecCceEEEEEEccCccCCcEEEeecCCcccccccee
Confidence 1456665411 144566666665443 22334455677888899865 5788899999998765322111
Q ss_pred -------EeeCCeEEECCCCCCCCeEEEEEeEeCCCC-ceeeEEEEEEEeccEEEeccce-eeeeccCeEEEEEEeecCC
Q psy15206 122 -------IFTGSTLQIPRITKEDRGAYYCVAQNGIGR-GARRKIEVKVEFAPIVTVQSTR-IGQALHHDMDLDCHIEAYP 192 (232)
Q Consensus 122 -------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~-~~~~~~~l~v~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p 192 (232)
....+.|.|......|.|.|+|.+.|..+. .....+.+.|..+|.+.+.+.. ..+..|+.+.|.|.+.|.|
T Consensus 166 ~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P 245 (313)
T 4fqp_A 166 PGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNP 245 (313)
T ss_dssp ECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEES
T ss_pred eeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCC
Confidence 111235888999999999999999986544 2455667778888887665443 3455688999999999999
Q ss_pred CC-eEEEeeCCEEecCCC---eEEEEEeccccCCceEEEEecC
Q psy15206 193 HP-ILYWAKDGEIVVNDE---YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 193 ~~-~~~W~~~g~~~~~~~---~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.| .|.|+|+|..+.... ...|.+.+++..|+|.|+|.|.
T Consensus 246 ~p~~v~W~~~~~~l~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 288 (313)
T 4fqp_A 246 EPTGYNWSTTMGPLPPFAVAQGAQLLIRPVDKPINTTLICNVT 288 (313)
T ss_dssp CCCEEEEEETTBSCCTTEEEETTEEEECCCSSCCEEEEEEEEE
T ss_pred CCcEEEEEECCEECCCceEEeCCEEEECcCChhhCEEEEEEEE
Confidence 98 699999998765321 1357778889999999999974
No 44
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.95 E-value=1.6e-26 Score=176.91 Aligned_cols=220 Identities=19% Similarity=0.314 Sum_probs=153.8
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEe-CcEe-------------------------------eeeEE
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRR-NFKR-------------------------------LGRLH 58 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~-~~~~-------------------------------~~~~~ 58 (232)
.+|.|+..+...+.+.+|+.++|.|.+.+.|.+.+.|++ ++.. .|.|+
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~ 81 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYA 81 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEE
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEE
Confidence 479999884444668899999999999999999999999 4321 45677
Q ss_pred EEeeee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCC---CeEEEEeCCeeeCC-----CCcE-E
Q psy15206 59 LAIPYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPI---PTISWRRENNAILP-----NGQT-I 122 (232)
Q Consensus 59 ~~~~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~~~W~~~~~~~~~-----~~~~-~ 122 (232)
|..... .+.+.+..+|.+.. .+....+.+|+.+.|.|.+.+.+. +.+.|++++..+.. ..+. .
T Consensus 82 C~a~n~~g~~~s~~~~v~v~~~p~~~~-~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 2v5m_A 82 CLARNQFGSIISRDVHVRAVVAQYYEA-DVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLV 160 (388)
T ss_dssp EEEEETTEEEECCCEEEEEECCCCCCC-BCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEE
T ss_pred EEEEccCCeEEecceEEEEcccccccc-CccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEE
Confidence 766322 34455555554433 345567889999999999987543 67999999876532 1222 3
Q ss_pred eeCCeEEECCCCCCCC-eEEEEEeEeCCCCceee---EEEEEEEec-----cEEE-eccceeeeeccCeEEEEEEeecCC
Q psy15206 123 FTGSTLQIPRITKEDR-GAYYCVAQNGIGRGARR---KIEVKVEFA-----PIVT-VQSTRIGQALHHDMDLDCHIEAYP 192 (232)
Q Consensus 123 ~~~~~l~i~~~~~~~~-g~y~C~~~~~~~~~~~~---~~~l~v~~~-----p~~~-~~~~~~~~~~g~~~~l~C~~~~~p 192 (232)
..++.|.|.+++.+|. |.|+|.+.+..+..... ...+.|..+ |.+. .......+..|+.+.|.|.+.|.|
T Consensus 161 ~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p 240 (388)
T 2v5m_A 161 LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFP 240 (388)
T ss_dssp CTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEES
T ss_pred ccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCC
Confidence 3457899999999999 99999999875432211 123444433 2211 112334577899999999999999
Q ss_pred CCeEEEeeCCEE------ecCCC-----eEEEEEeccccCCceEEEEecC
Q psy15206 193 HPILYWAKDGEI------VVNDE-----YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 193 ~~~~~W~~~g~~------~~~~~-----~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+.+.|+|++.. +.... ...|.+.++...|+|.|+|.|.
T Consensus 241 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 290 (388)
T 2v5m_A 241 APSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVN 290 (388)
T ss_dssp CCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEe
Confidence 999999997421 21121 1257778888899999999874
No 45
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.95 E-value=3.6e-26 Score=181.36 Aligned_cols=218 Identities=15% Similarity=0.218 Sum_probs=147.4
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCC--CeEEEEeCcEee---------------------------------
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPI--PTISWRRNFKRL--------------------------------- 54 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~--~~~~W~~~~~~~--------------------------------- 54 (232)
..+|.+... +....+.+|++++|.|.+.+.++ +.+.|+|++..+
T Consensus 112 ~~~P~~~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 190 (523)
T 2rcj_C 112 KANPTVTLF-PPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSH 190 (523)
T ss_pred CcCCeEEec-CCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCC
Confidence 467888877 66667788999999999998665 399999965321
Q ss_pred eeEEEEeeee------cCce----eecCCcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEEeCCeeeCCCC--c
Q psy15206 55 GRLHLAIPYT------SPEA----QVDTPPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWRRENNAILPNG--Q 120 (232)
Q Consensus 55 ~~~~~~~~~~------~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~~~~~--~ 120 (232)
|.|+|..... .+.+ .+..+|.+... .....+.+|+.+.|.|.+.|. |.+ .+.|++++..+.... .
T Consensus 191 G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~-~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~ 269 (523)
T 2rcj_C 191 RSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPL-APSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPA 269 (523)
T ss_pred ceEEEEEEecCcccccceeeeecCCCCcCCEEEec-CCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCc
Confidence 2444444222 1111 11234444322 222345689999999999886 767 799999987642110 1
Q ss_pred E------EeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEec-cceee-eeccCeEEEEEEeecCC
Q psy15206 121 T------IFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQ-STRIG-QALHHDMDLDCHIEAYP 192 (232)
Q Consensus 121 ~------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~-~~~~~-~~~g~~~~l~C~~~~~p 192 (232)
. ....+.|.|.++..+| |.|+|.+.|..+. ......+.+...|.+... +.... +..|+.+.|.|.+.|.|
T Consensus 270 ~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~-~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~ 347 (523)
T 2rcj_C 270 VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN-TKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVS 347 (523)
T ss_pred EecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCC-cceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEeccc
Confidence 1 1113479999999999 9999999998776 334455555555665443 33333 67899999999999875
Q ss_pred C----CeEEEeeCCEEecCCC----------eE----EEEEeccccCCceEEEEecC
Q psy15206 193 H----PILYWAKDGEIVVNDE----------YH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 193 ~----~~~~W~~~g~~~~~~~----------~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+ +.|.|+|+|..+.... .+ .|.+......|+|.|+|.|.
T Consensus 348 p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~ 404 (523)
T 2rcj_C 348 HEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVS 404 (523)
T ss_pred CCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEe
Confidence 4 4899999998775322 22 25556667789999999984
No 46
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=180.20 Aligned_cols=222 Identities=16% Similarity=0.258 Sum_probs=160.6
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEec-------CCCCCeEEEEeCcEee---------------------------
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAE-------GHPIPTISWRRNFKRL--------------------------- 54 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~-------~~p~~~~~W~~~~~~~--------------------------- 54 (232)
....|.+... +.+..+.+|++++|.|.+. +.|.+.+.|++++...
T Consensus 15 ~~~~p~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~ 93 (339)
T 3o4o_C 15 ARSCRFRGRH-YKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDS 93 (339)
T ss_dssp ---CEEEEEC-SCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCC
T ss_pred chhhHhhCcC-ceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccC
Confidence 4457888888 8899999999999999998 8889999999965431
Q ss_pred eeEEEEeeee------cCceeecCCcEEe-cCCCCceEeecCCcEEEEee-----eccCCCCeEEEEeCCeeeCCC-CcE
Q psy15206 55 GRLHLAIPYT------SPEAQVDTPPVIL-NNSPQLSVAKEGQSVQLECH-----AEGHPIPTISWRRENNAILPN-GQT 121 (232)
Q Consensus 55 ~~~~~~~~~~------~~~l~v~~~p~~~-~~~~~~~~~~~g~~~~l~C~-----~~~~~~~~~~W~~~~~~~~~~-~~~ 121 (232)
|.|.|..... .+.|.|..++... ........+..|+.+.|.|. +.+.|.+.+.|++++..+... .+.
T Consensus 94 G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~ 173 (339)
T 3o4o_C 94 GTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKF 173 (339)
T ss_dssp EEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSE
T ss_pred EEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCcee
Confidence 3455544221 4445554433211 00112246778999999999 777888999999999887544 233
Q ss_pred EeeC--CeEEECCCCCCCCeEEEEEeEeCCCC---ceeeEEEEEEEe-----ccEEEeccceeeeeccCeEEEEEEe---
Q psy15206 122 IFTG--STLQIPRITKEDRGAYYCVAQNGIGR---GARRKIEVKVEF-----APIVTVQSTRIGQALHHDMDLDCHI--- 188 (232)
Q Consensus 122 ~~~~--~~l~i~~~~~~~~g~y~C~~~~~~~~---~~~~~~~l~v~~-----~p~~~~~~~~~~~~~g~~~~l~C~~--- 188 (232)
.... +.|.|.++..+|.|.|+|.+.|..+. .....+.+.|.. +|.+...+....+..|+.+.|.|.+
T Consensus 174 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~ 253 (339)
T 3o4o_C 174 LSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLG 253 (339)
T ss_dssp EECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEES
T ss_pred EEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECC
Confidence 3332 47999999999999999999987653 245566777763 4566555666678889999999999
Q ss_pred ecCC-CCeEEEeeCCEEecC-----------------CC-e---EEEEEeccccCCc-eEEEEecC
Q psy15206 189 EAYP-HPILYWAKDGEIVVN-----------------DE-Y---HSISNFGTSEGTT-GSLQCKVP 231 (232)
Q Consensus 189 ~~~p-~~~~~W~~~g~~~~~-----------------~~-~---~~~~~~~~~~~d~-g~Y~C~~~ 231 (232)
.|.| .+.+.|+++|..+.. ++ . ..|.+.++..+|+ |.|+|.|.
T Consensus 254 ~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~ 319 (339)
T 3o4o_C 254 TGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVH 319 (339)
T ss_dssp SSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEE
T ss_pred CCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEE
Confidence 8999 788999999865421 11 1 1577788888997 99999974
No 47
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.95 E-value=3.3e-26 Score=168.46 Aligned_cols=208 Identities=12% Similarity=0.099 Sum_probs=139.9
Q ss_pred CeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee--------------------------eeEEEEeeee--
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL--------------------------GRLHLAIPYT-- 64 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~--------------------------~~~~~~~~~~-- 64 (232)
|.|... ..++.+.+|++++|.|.+.+. +.|++++..+ |.|+|.....
T Consensus 1 P~i~~~-~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 75 (289)
T 3mjg_X 1 LVVTPP-GPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRG 75 (289)
T ss_dssp CCBCSS-CSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC---
T ss_pred CeecCC-CCeEEEeCCCcEEEEEeccce----EEEECCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccCC
Confidence 566655 667889999999999999874 9999954432 3566655221
Q ss_pred -------cCceeecCCcEEecCCCCc---eEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCC
Q psy15206 65 -------SPEAQVDTPPVILNNSPQL---SVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRIT 134 (232)
Q Consensus 65 -------~~~l~v~~~p~~~~~~~~~---~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~ 134 (232)
.+.+.+..+.......... ..+.+|+.+.|.|.+. .|.+.+.|++.+........... ...+. .
T Consensus 76 ~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~~~-~~~~~----~ 149 (289)
T 3mjg_X 76 LETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPYDH-QRGFS----G 149 (289)
T ss_dssp ---CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCEET-TTEEE----E
T ss_pred CCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceeecC-CcCee----e
Confidence 2223333222221111112 5677899999999998 67778999887533222111111 11222 3
Q ss_pred CCCCeEEEEEeEeCCCCceeeEEEEEEEe--ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEec------
Q psy15206 135 KEDRGAYYCVAQNGIGRGARRKIEVKVEF--APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVV------ 206 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~~~~~~~~l~v~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~------ 206 (232)
..|.|.|+|.+.+..+...+..+.+.+.. +|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++....
T Consensus 150 ~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~ 229 (289)
T 3mjg_X 150 IFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPV 229 (289)
T ss_dssp CCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCE
T ss_pred eccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCccccc
Confidence 56899999999976654344445566654 6666666666778899999999999999999999997654321
Q ss_pred --------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 207 --------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 --------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
......|.+.++..+|+|.|+|.|.
T Consensus 230 ~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 262 (289)
T 3mjg_X 230 TDFLLDMPYHIRSILHIPSAELEDSGTYTCNVT 262 (289)
T ss_dssp EEESCTTTTEEEEEEEESSCCSSCCEEEEEEEE
T ss_pred ccccCCcceEEEEEEEEcccChhhCcEEEEEee
Confidence 1133678888999999999999974
No 48
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.95 E-value=1.2e-26 Score=176.19 Aligned_cols=195 Identities=14% Similarity=0.204 Sum_probs=144.0
Q ss_pred ceEeecCCeEEEEEEecCCCCCeEEEEeCcEe--------------------------------------------eeeE
Q psy15206 22 LSVAKEGQSVQLECHAEGHPIPTISWRRNFKR--------------------------------------------LGRL 57 (232)
Q Consensus 22 ~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~--------------------------------------------~~~~ 57 (232)
.+.+.+|++++|.|.+.+.|.+.+.|+|++.. .|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 46789999999999999989999999997421 0245
Q ss_pred EEEeeee--cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCC
Q psy15206 58 HLAIPYT--SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITK 135 (232)
Q Consensus 58 ~~~~~~~--~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~ 135 (232)
.|..... .+.|.|.. ... .+ ...+.+|+.+.|.|.+.+.|.+.+.|++++..+ ......|.|.++..
T Consensus 83 ~C~~~n~~~~~~l~V~~--~~~--~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~L~i~~v~~ 151 (363)
T 1wio_A 83 ICEVEDQKEEVQLLVFG--LTA--NS-DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------IQGGKTLSVSQLEL 151 (363)
T ss_dssp EEEETTEEEEEEEEEEE--EEE--SS-CSSEESBSCEEEEEECCTTCCCCEEEECSSSCE------EEESSEEEECSBCG
T ss_pred EEEEEECCCcEEEEEEe--CCC--CC-ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc------cccceEEEEeeCCh
Confidence 5544222 44455442 111 22 235678999999999988888999999987543 33567899999999
Q ss_pred CCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeec-----CCCCeEEEeeCCEEecC---
Q psy15206 136 EDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEA-----YPHPILYWAKDGEIVVN--- 207 (232)
Q Consensus 136 ~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-----~p~~~~~W~~~g~~~~~--- 207 (232)
+|.|.|+|.+.+..+. ....+.+.|..+|... ....+.+|+.+.|.|.+.+ .|.+.+.|+++|..+..
T Consensus 152 ~d~G~Y~C~a~~~~~~-~~~~~~l~v~~~p~~~---~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~ 227 (363)
T 1wio_A 152 QDSGTWTCTVLQNQKK-VEFKIDIVVLAFQKAS---SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWI 227 (363)
T ss_dssp GGCEECEEEEEETTEE-EEECCEECEECCSCSE---EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEE
T ss_pred hcCCEEEEEEecCCCe-EEEEEEEEEecCCCCC---CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEE
Confidence 9999999999986443 3444566666555432 4456778999999998877 77889999999876543
Q ss_pred -----CC-------------------eEEEEEeccccCCceEEEEecC
Q psy15206 208 -----DE-------------------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 208 -----~~-------------------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+. ...|.+.++..+|+|.|+|.|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 275 (363)
T 1wio_A 228 TFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLA 275 (363)
T ss_dssp EEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEEC
T ss_pred EEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEE
Confidence 22 3367777888899999999984
No 49
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.94 E-value=9e-27 Score=173.01 Aligned_cols=212 Identities=19% Similarity=0.266 Sum_probs=148.9
Q ss_pred CcceEeecCCeEEEEEEecC-CCCCeEEEEeCcE---------------------------------------------e
Q psy15206 20 TQLSVAKEGQSVQLECHAEG-HPIPTISWRRNFK---------------------------------------------R 53 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~-~p~~~~~W~~~~~---------------------------------------------~ 53 (232)
++++.+.+|++++|.|.+.+ .+.+.+.|+|+.. +
T Consensus 6 ~p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 85 (308)
T 4fom_A 6 EPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSD 85 (308)
T ss_dssp CCSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGG
T ss_pred CCEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHH
Confidence 45788999999999999875 4556799998311 1
Q ss_pred eeeEEEEeeee-------cCceeecCCcEEe-cCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCeeeCCCC-----
Q psy15206 54 LGRLHLAIPYT-------SPEAQVDTPPVIL-NNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENNAILPNG----- 119 (232)
Q Consensus 54 ~~~~~~~~~~~-------~~~l~v~~~p~~~-~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~~----- 119 (232)
.|.|.|..... ...+.+...+... ...+.......|+.+.|.|.+ .+.|.+.+.|++++..+....
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~ 165 (308)
T 4fom_A 86 SGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPN 165 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTT
T ss_pred CEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeee
Confidence 14677755221 3344444444332 223344445568899999985 578899999999987653221
Q ss_pred cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC-ceeeEEEEEEEeccEEEeccce-eeeeccCeEEEEEEeecCCCC-eE
Q psy15206 120 QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR-GARRKIEVKVEFAPIVTVQSTR-IGQALHHDMDLDCHIEAYPHP-IL 196 (232)
Q Consensus 120 ~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~-~~~~~~~l~v~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~-~~ 196 (232)
......+.|.|..+...|.|.|+|.+.|..+. .....+.|.|..+|.+...+.. ..+..|+.+.|.|.+.|.|.| .+
T Consensus 166 ~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v 245 (308)
T 4fom_A 166 ETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKS 245 (308)
T ss_dssp SCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEE
T ss_pred ecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEE
Confidence 11122346899999999999999999997554 2445567777788887665443 345568899999999999988 69
Q ss_pred EEeeCCEEecC----CCeEEEEEeccccCCceEEEEecC
Q psy15206 197 YWAKDGEIVVN----DEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 197 ~W~~~g~~~~~----~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|+|+|..+.. .+...+.+.+++.+|+|.|+|.|.
T Consensus 246 ~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~A~ 284 (308)
T 4fom_A 246 VWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYICKVT 284 (308)
T ss_dssp ECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSEEEEEEE
T ss_pred EEEECCeECCCcEEEcCCeEEEECCCChhhCEEEEEEEE
Confidence 99999876643 234455667788899999999974
No 50
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.94 E-value=1.9e-25 Score=177.19 Aligned_cols=209 Identities=16% Similarity=0.254 Sum_probs=144.8
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEeCcE-----------------------------------------eeeeEE
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK-----------------------------------------RLGRLH 58 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~-----------------------------------------~~~~~~ 58 (232)
|.++.+.+|++++|.|.+.+.+.+.+.|+|+.. +.|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (523)
T 2rcj_C 7 PPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYY 86 (523)
T ss_pred CCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEE
Confidence 678899999999999999988889999998531 003455
Q ss_pred EEeee---------ecCceee----cCCcEEecCCCCceEeecCCcEEEEeeeccCCCC--eEEEEeCCeeeCCCCcEE-
Q psy15206 59 LAIPY---------TSPEAQV----DTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIP--TISWRRENNAILPNGQTI- 122 (232)
Q Consensus 59 ~~~~~---------~~~~l~v----~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~~~W~~~~~~~~~~~~~~- 122 (232)
|.... ....|.| ..+|.+.. .+......+|+.+.|.|.+.|.+++ .+.|+++|..+.......
T Consensus 87 C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~-~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~ 165 (523)
T 2rcj_C 87 CASWNSSDNSYVFGTGTKVTVLGQPKANPTVTL-FPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTK 165 (523)
T ss_pred EEEccCCCccccccCceEEEeccCCCcCCeEEe-cCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEecc
Confidence 54422 1335566 23444432 3333455578999999999987654 899999998764322111
Q ss_pred ---------eeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEE----EEeccEEEeccceeeeeccCeEEEEEEee
Q psy15206 123 ---------FTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVK----VEFAPIVTVQSTRIGQALHHDMDLDCHIE 189 (232)
Q Consensus 123 ---------~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~----v~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 189 (232)
...+.|.|.++..+|.|.|+|.+.|..+.. ...+.+. +..+|.+........+..|+.+.|.|.+.
T Consensus 166 ~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~-~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~ 244 (523)
T 2rcj_C 166 PSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV-EKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVK 244 (523)
T ss_pred ccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCccc-ccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEe
Confidence 011369999999999999999999976652 2222221 23456665444344567899999999998
Q ss_pred cC-CCC-eEEEeeCCEEec---------CCCe----EEEEEeccccCCceEEEEecC
Q psy15206 190 AY-PHP-ILYWAKDGEIVV---------NDEY----HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 190 ~~-p~~-~~~W~~~g~~~~---------~~~~----~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
|. |.+ .|.|+++|..+. .++. ..|.+.++...| |.|+|.|.
T Consensus 245 g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~ 300 (523)
T 2rcj_C 245 DYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 300 (523)
T ss_pred ceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEE
Confidence 87 777 899999986532 1222 267777778889 99999974
No 51
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.94 E-value=2.3e-25 Score=173.70 Aligned_cols=214 Identities=18% Similarity=0.237 Sum_probs=141.7
Q ss_pred CCcccCCCeeecCCCcceEeecCCeEEEEEEecCCCCC---eEEEEeCcEee------------------------eeEE
Q psy15206 6 ESQVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIP---TISWRRNFKRL------------------------GRLH 58 (232)
Q Consensus 6 ~~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~---~~~W~~~~~~~------------------------~~~~ 58 (232)
.+.|..+|.+....+.+..+.+|++++|.|.+.+.+++ .+.|+|++..+ |.|+
T Consensus 79 ~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 158 (450)
T 1z7z_I 79 FLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFS 158 (450)
T ss_dssp EEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEE
T ss_pred EEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEEeeccccCceEE
Confidence 45566688777543677889999999999999998777 89999965332 4666
Q ss_pred EEeeee--------------cCceeecCCcEEecCCCCc---eEeecCCcEEEEeeeccC-C--CCeEEEEeCCeeeCCC
Q psy15206 59 LAIPYT--------------SPEAQVDTPPVILNNSPQL---SVAKEGQSVQLECHAEGH-P--IPTISWRRENNAILPN 118 (232)
Q Consensus 59 ~~~~~~--------------~~~l~v~~~p~~~~~~~~~---~~~~~g~~~~l~C~~~~~-~--~~~~~W~~~~~~~~~~ 118 (232)
|..... ...+.+...+ ...+.. ..+.+|+.+.|.|.+.+. | .+.+.|++++..+..
T Consensus 159 C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~---~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~- 234 (450)
T 1z7z_I 159 CRTELDLRPQGLELFENTSAPYQLQTFVLP---ATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP- 234 (450)
T ss_dssp EEEEEECGGGTSCEEEEECCCEECEECCCC---SSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC-
T ss_pred EEEEcccCCCCceEEeeccCccceeeeccC---CCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc-
Confidence 665332 1122222110 001111 567789999999999987 6 678999999988654
Q ss_pred CcEEeeCCeEEEC---CCCCCCCe--EEEEEeEeCCCCceeeEEEEEEEe--ccEEEeccceeeeeccCeEEEEEEeecC
Q psy15206 119 GQTIFTGSTLQIP---RITKEDRG--AYYCVAQNGIGRGARRKIEVKVEF--APIVTVQSTRIGQALHHDMDLDCHIEAY 191 (232)
Q Consensus 119 ~~~~~~~~~l~i~---~~~~~~~g--~y~C~~~~~~~~~~~~~~~l~v~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 191 (232)
........+.+. ++..+|.| .|.|.+.+..+. ......+.|.. +|.+... ...+.+|+.+.|.|.+.
T Consensus 235 -~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~-~~~~~~l~V~~~~~p~i~~~--~~~v~~G~~v~l~C~~~-- 308 (450)
T 1z7z_I 235 -TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQS-QETLQTVTIYSFPAPNVILT--KPEVSEGTEVTVKCEAH-- 308 (450)
T ss_dssp -EEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEE-EEEEEEEEEECCCCCEEEES--CSEEETTCEEEEEEEC---
T ss_pred -eEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCcc-EEEEEEEEEecCCCCeEecC--CeeEeCCCcEEEEEecC--
Confidence 233333333332 67899999 999999998765 44566777776 5555433 44788999999999997
Q ss_pred CCCeEEEeeCCEEe-cCCCeEEEEEeccccCCceEEEEecC
Q psy15206 192 PHPILYWAKDGEIV-VNDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 192 p~~~~~W~~~g~~~-~~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
|.+.+.| +|..+ ..+.+..|.+..+...|+|.|+|.|.
T Consensus 309 p~p~i~W--~g~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 347 (450)
T 1z7z_I 309 PRAKVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSAT 347 (450)
T ss_dssp -----------------CCCCCEEEECCGGGTTCEEEEEEE
T ss_pred CCCEeEE--CCEEcCCCCceEEEEEecCcccCCceEEEEEE
Confidence 8889999 77776 34456678888899999999999984
No 52
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.94 E-value=9.3e-25 Score=153.72 Aligned_cols=158 Identities=23% Similarity=0.409 Sum_probs=125.1
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe-----eCCeEEECCC-CCCCCeEEEEEe
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF-----TGSTLQIPRI-TKEDRGAYYCVA 145 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~-----~~~~l~i~~~-~~~~~g~y~C~~ 145 (232)
.+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+........ ....|.|.++ ..+|.|.|+|.+
T Consensus 5 ~~P~~~~-~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 5 TPPRFTR-TPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp EEEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCeEEe-CcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 4555554 56667888999999999999989899999999988765433222 1346999999 499999999999
Q ss_pred EeCCCCceeeEEEEEEEec-------cEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC----------
Q psy15206 146 QNGIGRGARRKIEVKVEFA-------PIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND---------- 208 (232)
Q Consensus 146 ~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~---------- 208 (232)
.+..+. ....+.+.|... |.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+...
T Consensus 84 ~n~~g~-~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~ 162 (212)
T 2yd6_A 84 SNNVGE-ISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLR 162 (212)
T ss_dssp EETTEE-EEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEE
T ss_pred EcCCCc-EEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEe
Confidence 998776 556777777654 66777777777888999999999999999999999999877643
Q ss_pred --CeEEEEEeccccCCceEEEEecC
Q psy15206 209 --EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 --~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
....|.+.++...|+|.|+|.|.
T Consensus 163 ~~~~~~L~i~~~~~~d~G~Y~C~a~ 187 (212)
T 2yd6_A 163 SESIGALQIEQSEESDQGKYECVAT 187 (212)
T ss_dssp ETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred cCCeEEEEEcCCCcccCEEEEEEEE
Confidence 23567778888999999999974
No 53
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.94 E-value=1.2e-24 Score=149.47 Aligned_cols=150 Identities=20% Similarity=0.412 Sum_probs=125.3
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee------CCeEEECCCCCCCCeEEEEEeEeCCCCce
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT------GSTLQIPRITKEDRGAYYCVAQNGIGRGA 153 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~------~~~l~i~~~~~~~~g~y~C~~~~~~~~~~ 153 (232)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......... .+.|.|.++..+|.|.|.|.+.+..+...
T Consensus 8 ~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 87 (182)
T 1rhf_A 8 APVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEI 87 (182)
T ss_dssp CCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEE
T ss_pred CCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEE
Confidence 556677889999999999999888899999999887654332221 25799999999999999999998766545
Q ss_pred eeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCC-eEEEeeCCEEecCC--CeEEEEEeccccCCceEEEEec
Q psy15206 154 RRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHP-ILYWAKDGEIVVND--EYHSISNFGTSEGTTGSLQCKV 230 (232)
Q Consensus 154 ~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~g~~~~~~--~~~~~~~~~~~~~d~g~Y~C~~ 230 (232)
...+.+.|..+|.+...+....+..|+.+.|.|.+.|.|.| .+.|+++|..+... ....+.+.++ .|+|.|+|.|
T Consensus 88 ~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a 165 (182)
T 1rhf_A 88 SQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGV--TQSTMFSCEA 165 (182)
T ss_dssp CCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEESSEEEEECCC--SSCEEEEEEE
T ss_pred EEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCCCceEEEEecc--ccCeEEEEEE
Confidence 67788999999999888888888899999999999999999 99999999988654 4567777766 6899999997
Q ss_pred C
Q psy15206 231 P 231 (232)
Q Consensus 231 ~ 231 (232)
.
T Consensus 166 ~ 166 (182)
T 1rhf_A 166 H 166 (182)
T ss_dssp E
T ss_pred E
Confidence 4
No 54
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.93 E-value=2e-24 Score=149.76 Aligned_cols=157 Identities=24% Similarity=0.406 Sum_probs=125.1
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC--c--EEee--CCeEEECCCCCCCCeEEEEEeE
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG--Q--TIFT--GSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~--~--~~~~--~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... + .... ...|.|.++...|.|.|+|.+.
T Consensus 5 ~P~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 5 APTFTQ-PLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCeEEc-cCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 444443 5666788899999999999988888999999998775432 1 1222 2479999999999999999999
Q ss_pred eCCCCceeeEEEEEEE---eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeE---------EEE
Q psy15206 147 NGIGRGARRKIEVKVE---FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYH---------SIS 214 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~---------~~~ 214 (232)
+..+. ......+.|. .+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+....++ .+.
T Consensus 84 n~~~~-~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~ 162 (194)
T 2a38_A 84 NGSGQ-ATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLL 162 (194)
T ss_dssp ETTEE-EEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEE
T ss_pred cCCce-EeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEE
Confidence 87765 4455667776 5677777777778889999999999999999999999999887654433 566
Q ss_pred EeccccCCceEEEEecC
Q psy15206 215 NFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 215 ~~~~~~~d~g~Y~C~~~ 231 (232)
+.++...|+|.|+|.|.
T Consensus 163 i~~~~~~d~G~Y~C~a~ 179 (194)
T 2a38_A 163 IAEAYPEDSGTYSVNAT 179 (194)
T ss_dssp EEEECGGGCEEEEEEEE
T ss_pred ECCCChhcCeEEEEEEE
Confidence 77788899999999974
No 55
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.93 E-value=4.5e-24 Score=150.20 Aligned_cols=159 Identities=25% Similarity=0.473 Sum_probs=128.2
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeC-CCCcEEee---C--CeEEECCCCC-CCCeEEEEE
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAIL-PNGQTIFT---G--STLQIPRITK-EDRGAYYCV 144 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~-~~~~~~~~---~--~~l~i~~~~~-~~~g~y~C~ 144 (232)
.+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. ...++... + ..|.|.++.. .|.|.|+|.
T Consensus 5 ~pP~~~~-~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 5 HPPEIIR-KPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp CCCEEEE-CCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCEEEc-CCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 3555554 5667788899999999999998989999999998875 23333221 2 4799999999 999999999
Q ss_pred eEeCCCCceeeEEEEEEEec-------cEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC-CeE-----
Q psy15206 145 AQNGIGRGARRKIEVKVEFA-------PIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND-EYH----- 211 (232)
Q Consensus 145 ~~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~-~~~----- 211 (232)
+.+..+......+.+.|... |.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+... .++
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~ 163 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDG 163 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETT
T ss_pred EEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCC
Confidence 99987764567778888765 77777777778888999999999999999999999999887642 222
Q ss_pred EEEEeccccCCceEEEEecC
Q psy15206 212 SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 212 ~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|.+.++...|+|.|+|.|.
T Consensus 164 ~L~i~~v~~~d~G~Y~C~a~ 183 (212)
T 2yd1_A 164 FLQIENSREEDQGKYECVAE 183 (212)
T ss_dssp EEEECSCCGGGCEEEEEEEE
T ss_pred eEEEccCChhhCEEEEEEee
Confidence 57777888899999999974
No 56
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.93 E-value=1.7e-24 Score=153.03 Aligned_cols=147 Identities=22% Similarity=0.285 Sum_probs=127.3
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEV 159 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 159 (232)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++...|.|.|+|.+.+..+......+.+
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l 98 (218)
T 3k0w_A 24 NPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG-----NTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQL 98 (218)
T ss_dssp CCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC-----CSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEE
T ss_pred CCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC-----CCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEE
Confidence 566778889999999999999888999999999876543 246899999999999999999999876544556777
Q ss_pred EEEec---------------cEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeEEEEEeccccCCce
Q psy15206 160 KVEFA---------------PIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYHSISNFGTSEGTTG 224 (232)
Q Consensus 160 ~v~~~---------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~d~g 224 (232)
.|... |.+...+....+..|+.+.|.|.+.+.|.+.+.|+++|..+.......+.+.++...|+|
T Consensus 99 ~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G 178 (218)
T 3k0w_A 99 DVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQG 178 (218)
T ss_dssp EEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCSSEEEESSCCGGGCE
T ss_pred EEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCCCEEEEeecChhcCE
Confidence 77654 677777777888899999999999999999999999999998887888999999999999
Q ss_pred EEEEecC
Q psy15206 225 SLQCKVP 231 (232)
Q Consensus 225 ~Y~C~~~ 231 (232)
.|+|.|.
T Consensus 179 ~Y~C~a~ 185 (218)
T 3k0w_A 179 TYWCHVY 185 (218)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999874
No 57
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.93 E-value=1.4e-24 Score=150.84 Aligned_cols=150 Identities=21% Similarity=0.337 Sum_probs=123.8
Q ss_pred CCCceEeecCCcEEEEeeec-cCCCCeEEEEeCCeeeCCCCc--EEee-----------CCeEEECCCCCCCCeEEEEEe
Q psy15206 80 SPQLSVAKEGQSVQLECHAE-GHPIPTISWRRENNAILPNGQ--TIFT-----------GSTLQIPRITKEDRGAYYCVA 145 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~--~~~~-----------~~~l~i~~~~~~~~g~y~C~~ 145 (232)
.+....+.+|+.+.|.|.+. +.|.+.+.|++++..+..... .... .+.|.|.++...|.|.|.|.+
T Consensus 8 ~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 87 (195)
T 2c5d_C 8 NPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLV 87 (195)
T ss_dssp CCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEE
T ss_pred ChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEE
Confidence 56677888999999999998 888889999999988765421 1111 357999999999999999999
Q ss_pred EeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCC-eEEEeeCCEEecCC----CeEEEEEecccc
Q psy15206 146 QNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHP-ILYWAKDGEIVVND----EYHSISNFGTSE 220 (232)
Q Consensus 146 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~g~~~~~~----~~~~~~~~~~~~ 220 (232)
.+..+......+.+.|..+|.+...+....+..|+.+.|.|.+.|.|.+ .+.|+++|..+... ....+.+.++.
T Consensus 88 ~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~- 166 (195)
T 2c5d_C 88 FLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQRSLHVPGLN- 166 (195)
T ss_dssp EETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTSSCCEEEEECCCS-
T ss_pred EeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCcCCCCeEEEcccc-
Confidence 9976654455588889899998888888888899999999999999999 99999999887643 45667777665
Q ss_pred CCceEEEEecC
Q psy15206 221 GTTGSLQCKVP 231 (232)
Q Consensus 221 ~d~g~Y~C~~~ 231 (232)
|+|.|+|.|.
T Consensus 167 -d~G~Y~C~a~ 176 (195)
T 2c5d_C 167 -KTSSFSCEAH 176 (195)
T ss_dssp -SCEEEEEEEE
T ss_pred -cCceEEEEEE
Confidence 8899999974
No 58
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.93 E-value=4.3e-24 Score=171.56 Aligned_cols=209 Identities=19% Similarity=0.279 Sum_probs=149.4
Q ss_pred CcceEeecCCeEEEEEEecCCC-C-CeEEEE-eCcE-----------------------------------------eee
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP-I-PTISWR-RNFK-----------------------------------------RLG 55 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p-~-~~~~W~-~~~~-----------------------------------------~~~ 55 (232)
+..+.+.+|++++|.|.+.+.+ . +.+.|+ +++. +.|
T Consensus 224 p~~~~~~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G 303 (585)
T 2ocw_A 224 PELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAG 303 (585)
T ss_pred CceeEEcCCCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCE
Confidence 4556688999999999985422 2 688896 5441 013
Q ss_pred eEEEEeee----------ecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeE----EEEe--CCe--eeCC
Q psy15206 56 RLHLAIPY----------TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTI----SWRR--ENN--AILP 117 (232)
Q Consensus 56 ~~~~~~~~----------~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~----~W~~--~~~--~~~~ 117 (232)
.|.|.... ..+.|.|..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+ .|++ ++. .+..
T Consensus 304 ~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~-~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~ 382 (585)
T 2ocw_A 304 RYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPR-SPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVD 382 (585)
T ss_pred EEEEEEEcCCCccccCceeeEEEEEeccccccc-CCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeee
Confidence 45554422 234566766665543 456677889999999999999888876 7999 776 3321
Q ss_pred ---------CCcEEe----eCC--eEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeE
Q psy15206 118 ---------NGQTIF----TGS--TLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDM 182 (232)
Q Consensus 118 ---------~~~~~~----~~~--~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~ 182 (232)
..+... .++ +|.|.++..+|.|.|+|.+ |..+. ....+.|.|...|.....+....+..|+.+
T Consensus 383 ~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~-~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v 460 (585)
T 2ocw_A 383 SEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTL-WRTTVEIKIIEGEPNLKVPGNVTAVLGETL 460 (585)
T ss_pred ecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCc-cceeEEEEEecCccccccCCceeEecCCcE
Confidence 112222 123 3999999999999999998 76665 456677777764444344677788899999
Q ss_pred EEEEEee----cCCCCeEEEeeCCEEecCC----------------CeEEEEEeccccCCceEEEEecC
Q psy15206 183 DLDCHIE----AYPHPILYWAKDGEIVVND----------------EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 183 ~l~C~~~----~~p~~~~~W~~~g~~~~~~----------------~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|.|.+. +.|.+.|.|+|+|..+... ....|.+.++..+|+|.|+|.|.
T Consensus 461 ~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 529 (585)
T 2ocw_A 461 KVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVK 529 (585)
T ss_pred EEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeE
Confidence 9999986 7778899999999765321 12578888899999999999984
No 59
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.93 E-value=2.1e-24 Score=149.45 Aligned_cols=158 Identities=23% Similarity=0.391 Sum_probs=129.1
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC-CCcEEe--eCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP-NGQTIF--TGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~-~~~~~~--~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
+|.+. ..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..+... .+..|.|.++...|.|.|.|.+.+..
T Consensus 7 ~P~i~-~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 85 (192)
T 2iep_A 7 APVIT-TPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGV 85 (192)
T ss_dssp EEEES-SCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSS
T ss_pred Cceee-cCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCC
Confidence 34443 356667788999999999999888889999999987754 223322 34579999999999999999999987
Q ss_pred CCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeE------EEEEeccccCCc
Q psy15206 150 GRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYH------SISNFGTSEGTT 223 (232)
Q Consensus 150 ~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~------~~~~~~~~~~d~ 223 (232)
+........+.|..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+....++ .+.+.++...|+
T Consensus 86 ~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 165 (192)
T 2iep_A 86 GGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDA 165 (192)
T ss_dssp SCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCGGGC
T ss_pred CceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCChhhC
Confidence 76566677888888898888777788889999999999999999999999999887655433 466777888999
Q ss_pred eEEEEecC
Q psy15206 224 GSLQCKVP 231 (232)
Q Consensus 224 g~Y~C~~~ 231 (232)
|.|+|.|.
T Consensus 166 G~Y~C~a~ 173 (192)
T 2iep_A 166 GQYRCVAK 173 (192)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999974
No 60
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.93 E-value=5.8e-24 Score=147.09 Aligned_cols=154 Identities=18% Similarity=0.350 Sum_probs=123.8
Q ss_pred CcEEecCCCCceEeec-CCcEEEEeeeccCCC--CeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 73 PPVILNNSPQLSVAKE-GQSVQLECHAEGHPI--PTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~-g~~~~l~C~~~~~~~--~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
+|.+.. +....+.+ |+.+.|.|.+.+.+. +.+.|++++..+...... ..+..|.|.++..+|.|.|.|.+.+.
T Consensus 3 ~P~i~~--~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n~- 78 (190)
T 2wv3_A 3 EPRIVT--SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKN-ASNMEYRINKPRAEDSGEYHCVYHFV- 78 (190)
T ss_dssp CCEEEE--CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBC-CSEEEEEESSCCGGGCEEEEEEEEET-
T ss_pred CCcccc--cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceE-eccEEEEEecCCcccCEEEEEEEEeC-
Confidence 455543 33345556 999999999988776 789999999887544322 24568999999999999999999998
Q ss_pred CCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEee--CCEEec---CCCe---------EEEEE
Q psy15206 150 GRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAK--DGEIVV---NDEY---------HSISN 215 (232)
Q Consensus 150 ~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~--~g~~~~---~~~~---------~~~~~ 215 (232)
+. ....+.+.|..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++ +|..+. ...+ ..|.+
T Consensus 79 ~~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i 157 (190)
T 2wv3_A 79 SA-PKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNI 157 (190)
T ss_dssp TE-EEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEE
T ss_pred Cc-ccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEE
Confidence 54 667888999999999888888889999999999999999999999999 777654 2222 35777
Q ss_pred eccc-cCCceEEEEecC
Q psy15206 216 FGTS-EGTTGSLQCKVP 231 (232)
Q Consensus 216 ~~~~-~~d~g~Y~C~~~ 231 (232)
.++. ..|+|.|+|.|.
T Consensus 158 ~~~~~~~d~G~Y~C~a~ 174 (190)
T 2wv3_A 158 VNLQITEDPGEYECNAT 174 (190)
T ss_dssp CSCCTTTSCEEEEEEEE
T ss_pred EeccccCCCEEEEEEEE
Confidence 7888 699999999874
No 61
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.93 E-value=5.3e-25 Score=170.98 Aligned_cols=208 Identities=13% Similarity=0.189 Sum_probs=140.1
Q ss_pred CcceEeecCCeEEEEEEecCCCC----CeEEEEeCc--E---------------------------------------ee
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPI----PTISWRRNF--K---------------------------------------RL 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~----~~~~W~~~~--~---------------------------------------~~ 54 (232)
|.++.+.+|++++|.|.+.+.+. +.+.|+|+. . +.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (438)
T 1qgc_4 8 PASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDV 87 (438)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCC
Confidence 67888999999999999988765 489999942 1 01
Q ss_pred eeEEEEeeee-------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeCCeeeCCCCc--
Q psy15206 55 GRLHLAIPYT-------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRENNAILPNGQ-- 120 (232)
Q Consensus 55 ~~~~~~~~~~-------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~~~~~~~~-- 120 (232)
|.|.|..... ...|.|.. +|.+....+. ....+|..+.|.|.+.+ .|.+ .+.|+++|..+.....
T Consensus 88 G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 166 (438)
T 1qgc_4 88 ATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNS 166 (438)
T ss_dssp EEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEE
T ss_pred eeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCC-hhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceec
Confidence 2445544221 23445432 3433321222 12235789999999987 6666 8999999987754311
Q ss_pred ---------EEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEE--eccEEEeccceeeeeccCeEEEEEEee
Q psy15206 121 ---------TIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVE--FAPIVTVQSTRIGQALHHDMDLDCHIE 189 (232)
Q Consensus 121 ---------~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~--~~p~~~~~~~~~~~~~g~~~~l~C~~~ 189 (232)
.....+.|.|.++..+|.|.|+|.+.|..+.. .+.+.+. .++.....+....+..|+.+.|.|.+.
T Consensus 167 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~ 243 (438)
T 1qgc_4 167 WTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS---PIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTAS 243 (438)
T ss_dssp EECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS---CEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEE
T ss_pred cccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCC---ceecccccccceeEEecCCceEEecCCcEEEEEEEc
Confidence 11113478999999999999999999976652 1222332 122233345566788999999999999
Q ss_pred cCC--CCeEEEeeC--CEEec----------------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 190 AYP--HPILYWAKD--GEIVV----------------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 190 ~~p--~~~~~W~~~--g~~~~----------------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
|.| .+.+.|+|+ |..+. ......|.+.++..+|+|.|.|.|.
T Consensus 244 g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 317 (438)
T 1qgc_4 244 GFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRR 317 (438)
T ss_dssp SSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEEC
T ss_pred ccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEE
Confidence 998 568999996 43221 0124477888889999999999985
No 62
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.93 E-value=7e-25 Score=170.31 Aligned_cols=218 Identities=18% Similarity=0.296 Sum_probs=142.1
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecC-CCCC-eEEEEeCcEee----------------------------------
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEG-HPIP-TISWRRNFKRL---------------------------------- 54 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~-~p~~-~~~W~~~~~~~---------------------------------- 54 (232)
.+|.+... +....+.+|+.++|.|.+.+ .|.+ .+.|++++..+
T Consensus 115 ~~P~v~~~-~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 193 (438)
T 1qgc_4 115 AAPTVSIF-PPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERH 193 (438)
T ss_dssp BCCEEEEE-CCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTC
T ss_pred CCCEEEec-CCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCC
Confidence 37777765 33334457889999999987 6766 89999965332
Q ss_pred eeEEEEeeee--c--CceeecC--CcEEecCCCCceEeecCCcEEEEeeeccCC--CCeEEEEeC--CeeeC--------
Q psy15206 55 GRLHLAIPYT--S--PEAQVDT--PPVILNNSPQLSVAKEGQSVQLECHAEGHP--IPTISWRRE--NNAIL-------- 116 (232)
Q Consensus 55 ~~~~~~~~~~--~--~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~--~~~~~-------- 116 (232)
|.|+|..... . +.+.+.. ++.... .+....+.+|+.+.|.|.+.|.| .+.+.|+++ +..+.
T Consensus 194 G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~ 272 (438)
T 1qgc_4 194 NSYTCEATHKTSTSPIVKSFNRNECEVMLV-ESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSG 272 (438)
T ss_dssp CEEEEEEEETTCSSCEEEEEETTC-CCEEE-EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTT
T ss_pred CeEEEEEEecccCCceecccccccceeEEe-cCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeec
Confidence 2344443222 1 2222221 112221 23456788899999999999887 568999986 43321
Q ss_pred ---------CCCcEEee------CCeEEECCCCCCCCeEEEEEeEeCCC--C--ceeeEEEEEEE----eccEEEeccce
Q psy15206 117 ---------PNGQTIFT------GSTLQIPRITKEDRGAYYCVAQNGIG--R--GARRKIEVKVE----FAPIVTVQSTR 173 (232)
Q Consensus 117 ---------~~~~~~~~------~~~l~i~~~~~~~~g~y~C~~~~~~~--~--~~~~~~~l~v~----~~p~~~~~~~~ 173 (232)
...++... ...|.|.++..+|.|.|.|.+.|..+ . .......+.|. .+|.+...+..
T Consensus 273 ~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~ 352 (438)
T 1qgc_4 273 GTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPG 352 (438)
T ss_dssp SCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCC
T ss_pred CCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcc
Confidence 01222221 23799999999999999999998432 1 12233456665 35666554444
Q ss_pred eeeeccCeEEEEEEeecC-CCC-eEEEeeCCEEec--------CCCeE----EEEEeccccCCceEEEEecC
Q psy15206 174 IGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEIVV--------NDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 174 ~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~~~--------~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+..|+.++|.|.+.|. |.+ .|.|+++|..+. .++.+ .|.+......| |.|+|.|.
T Consensus 353 ~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~ 423 (438)
T 1qgc_4 353 SAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVA 423 (438)
T ss_dssp GGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEE
T ss_pred cccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEE
Confidence 456689999999999997 877 899999986643 12333 35556666678 99999984
No 63
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.93 E-value=7.3e-25 Score=170.81 Aligned_cols=211 Identities=13% Similarity=0.144 Sum_probs=149.7
Q ss_pred eecCCCcceEeecCCeEEEEEEecCCCCCeE-----EEEeCcE-----------------eeeeEEEEeeee------cC
Q psy15206 15 ILNNSTQLSVAKEGQSVQLECHAEGHPIPTI-----SWRRNFK-----------------RLGRLHLAIPYT------SP 66 (232)
Q Consensus 15 i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~-----~W~~~~~-----------------~~~~~~~~~~~~------~~ 66 (232)
|... |.+..+.+|++++|.|.+.+ |.+.+ .|+|++. +.+ |.|..... .+
T Consensus 2 i~~~-P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~~~~~l~i~~v~~d~g-Y~C~a~~~~~~~~~~~ 78 (450)
T 1z7z_I 2 TSVS-PSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQ-PMCYSNCPDGQSTAKT 78 (450)
T ss_dssp CEEE-SSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTTTEEEEEEEEECSCBC-CEEEEEETTEEEEEEC
T ss_pred cccC-CCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecCCCceEEEEEecccCCe-eEEEEeCCCCcceeEE
Confidence 3444 78889999999999999999 88888 8998543 223 77766322 46
Q ss_pred ceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCC---eEEEEeCCeeeCCCCcE-EeeCCeEEECCCCCCCCeEEE
Q psy15206 67 EAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIP---TISWRRENNAILPNGQT-IFTGSTLQIPRITKEDRGAYY 142 (232)
Q Consensus 67 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~---~~~W~~~~~~~~~~~~~-~~~~~~l~i~~~~~~~~g~y~ 142 (232)
.|.|..+|......+....+.+|+.+.|.|.+.+.+++ .+.|++++..+...... ......|.|.++..+|.|.|+
T Consensus 79 ~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 158 (450)
T 1z7z_I 79 FLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFS 158 (450)
T ss_dssp EEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEE
T ss_pred EEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEEeeccccCceEE
Confidence 77777777665445555678899999999999998877 89999999876422110 111347999999999999999
Q ss_pred EEeEeCCCCce-------eeEEEEEEEec----cEEEeccceeeeeccCeEEEEEEeecC-C--CCeEEEeeCCEEecC-
Q psy15206 143 CVAQNGIGRGA-------RRKIEVKVEFA----PIVTVQSTRIGQALHHDMDLDCHIEAY-P--HPILYWAKDGEIVVN- 207 (232)
Q Consensus 143 C~~~~~~~~~~-------~~~~~l~v~~~----p~~~~~~~~~~~~~g~~~~l~C~~~~~-p--~~~~~W~~~g~~~~~- 207 (232)
|.+.|..+... .....+.+... |.+.. ...+..|+.+.|.|.+.|. | .+.+.|+++|..+..
T Consensus 159 C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~---~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~~ 235 (450)
T 1z7z_I 159 CRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPT 235 (450)
T ss_dssp EEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEEC---CSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCCE
T ss_pred EEEEcccCCCCceEEeeccCccceeeeccCCCCCEecC---ceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCce
Confidence 99998755311 12233333322 22221 1567889999999999998 6 678999999987653
Q ss_pred ----CCeEEEE-EeccccCCce--EEEEecC
Q psy15206 208 ----DEYHSIS-NFGTSEGTTG--SLQCKVP 231 (232)
Q Consensus 208 ----~~~~~~~-~~~~~~~d~g--~Y~C~~~ 231 (232)
.+...+. ..++...|+| .|.|.+.
T Consensus 236 ~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~ 266 (450)
T 1z7z_I 236 VTYGNDSFSAKASVSVTAEDEGTQRLTCAVI 266 (450)
T ss_dssp EEEETTEEEEEEEEECCGGGCEEEEEEEEEE
T ss_pred EEecCCceeEEEEEEeEhhhCCcEEEEEEEc
Confidence 1222222 2255779999 9999874
No 64
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.93 E-value=4e-24 Score=148.64 Aligned_cols=157 Identities=18% Similarity=0.339 Sum_probs=123.8
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC-cEEe---eCC--eEEECCCCCCCCeEEEEEeE
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG-QTIF---TGS--TLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~-~~~~---~~~--~l~i~~~~~~~~g~y~C~~~ 146 (232)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... +... .++ .|.|.++..+|.|.|+|.+.
T Consensus 4 ~P~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 4 APHFKE-ELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCEEEE-CCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCEEEE-cCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 455544 4566788899999999999998889999999998875432 2222 122 89999999999999999999
Q ss_pred eCCCCceeeEEEEEEEeccEEEecc-----ceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EE
Q psy15206 147 NGIGRGARRKIEVKVEFAPIVTVQS-----TRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HS 212 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p~~~~~~-----~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~ 212 (232)
+..+. ....+.+.|..+|.+.... ....+..|+.+.|.|.+.|.|.+.+.|+++|..+....+ ..
T Consensus 83 n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (197)
T 2j8h_A 83 NQGGS-VSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (197)
T ss_dssp ETTEE-EEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEE
T ss_pred ECCCc-eeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceE
Confidence 98766 5677788888777654322 345677899999999999999999999999988765433 35
Q ss_pred EEEec-cccCCceEEEEecC
Q psy15206 213 ISNFG-TSEGTTGSLQCKVP 231 (232)
Q Consensus 213 ~~~~~-~~~~d~g~Y~C~~~ 231 (232)
+.+.+ +...|+|.|+|.|.
T Consensus 162 L~i~~~~~~~d~G~Y~C~a~ 181 (197)
T 2j8h_A 162 LVFPNGVERKDAGFYVVCAK 181 (197)
T ss_dssp EECTTCCCGGGCEEEEEEEE
T ss_pred EEEeCCCCcccCEeEEEEEE
Confidence 56667 88899999999874
No 65
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.93 E-value=1.5e-23 Score=168.36 Aligned_cols=216 Identities=18% Similarity=0.311 Sum_probs=153.7
Q ss_pred CCcccCCCeeecCCCcceEeecCCeEEEEEEecC-CCCCeEEEEeCcEe----------------ee-------------
Q psy15206 6 ESQVDTPPVILNNSTQLSVAKEGQSVQLECHAEG-HPIPTISWRRNFKR----------------LG------------- 55 (232)
Q Consensus 6 ~~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~-~p~~~~~W~~~~~~----------------~~------------- 55 (232)
.+.|..+|.+... +.+..+.+|++++|.|.+.+ .+.+.+.|+|++.. .+
T Consensus 106 ~l~V~~~p~~~~~-~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 184 (585)
T 2ocw_A 106 SLEVSQGPGLLND-TKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLL 184 (585)
T ss_pred EEEEecCccccCC-CccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcE
Confidence 4567788988777 88899999999999999996 45678999996431 11
Q ss_pred --------------eEEEEeeee------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCC---CeEEEE-eC
Q psy15206 56 --------------RLHLAIPYT------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPI---PTISWR-RE 111 (232)
Q Consensus 56 --------------~~~~~~~~~------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~~~W~-~~ 111 (232)
.|+|..... .+.|.|..+ .+....+.+|+.+.|.|.+ +.+. +.+.|+ ++
T Consensus 185 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~------~p~~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~ 257 (585)
T 2ocw_A 185 FSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP------EPELVYEDLRGSVTFHCAL-GPEVANVAKFLCRQSS 257 (585)
T ss_pred EEEEEccCChhHCeEEEEEeccCCccccceEEEEEccC------CCceeEEcCCCcEEEEEEc-CCCCCCceEEEEEeCC
Confidence 233322111 333444332 2334556789999999997 4343 568886 77
Q ss_pred Cee---eCC---------CCcEEee----CC--eEEECCCCCCCCeEEEEEeEeCCCCce----eeEEEEEEEeccEEEe
Q psy15206 112 NNA---ILP---------NGQTIFT----GS--TLQIPRITKEDRGAYYCVAQNGIGRGA----RRKIEVKVEFAPIVTV 169 (232)
Q Consensus 112 ~~~---~~~---------~~~~~~~----~~--~l~i~~~~~~~~g~y~C~~~~~~~~~~----~~~~~l~v~~~p~~~~ 169 (232)
+.. +.. ..+.... ++ .|.|.++..+|.|.|+|.+.|. +... ...+.|.|..+|.+..
T Consensus 258 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~~~p~~~~ 336 (585)
T 2ocw_A 258 GENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNEESTIPR 336 (585)
T ss_pred CCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEeccccccc
Confidence 631 111 1222221 23 6999999999999999999985 3322 2677888888888887
Q ss_pred ccceeeeeccCeEEEEEEeecCCCCeE----EEee--CCE--EecC--------------------CCeEEEEEeccccC
Q psy15206 170 QSTRIGQALHHDMDLDCHIEAYPHPIL----YWAK--DGE--IVVN--------------------DEYHSISNFGTSEG 221 (232)
Q Consensus 170 ~~~~~~~~~g~~~~l~C~~~~~p~~~~----~W~~--~g~--~~~~--------------------~~~~~~~~~~~~~~ 221 (232)
.+....+..|+.+.|.|.+.+.|.+.+ .|++ +|. .+.. ...+.|.+.++...
T Consensus 337 ~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~ 416 (585)
T 2ocw_A 337 SPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSR 416 (585)
T ss_pred CCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChh
Confidence 788888889999999999999999876 7999 876 3321 12345778888999
Q ss_pred CceEEEEec
Q psy15206 222 TTGSLQCKV 230 (232)
Q Consensus 222 d~g~Y~C~~ 230 (232)
|+|.|+|.|
T Consensus 417 D~G~Y~C~a 425 (585)
T 2ocw_A 417 DAGFYWCLT 425 (585)
T ss_pred hCEEEEEcc
Confidence 999999986
No 66
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.93 E-value=4.8e-24 Score=147.34 Aligned_cols=151 Identities=20% Similarity=0.354 Sum_probs=121.7
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEe-CCeeeCCCCcEEee-C---CeEEECCCCCCCCeEEEEEeEeCCCCcee
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRR-ENNAILPNGQTIFT-G---STLQIPRITKEDRGAYYCVAQNGIGRGAR 154 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~-~~~~~~~~~~~~~~-~---~~l~i~~~~~~~~g~y~C~~~~~~~~~~~ 154 (232)
.+....+.+|+.+.|.|.+.+.|. .+.|++ ++..+....+.... . ..|.|.++..+|.|.|+|.+.+..+....
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~ 86 (189)
T 2v44_A 8 SLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQE 86 (189)
T ss_dssp SCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEE
T ss_pred cCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEE
Confidence 456677889999999999988776 899999 66665544444332 2 38999999999999999999998776557
Q ss_pred eEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEec--CCCeE------EEEEeccccCCceEE
Q psy15206 155 RKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVV--NDEYH------SISNFGTSEGTTGSL 226 (232)
Q Consensus 155 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~--~~~~~------~~~~~~~~~~d~g~Y 226 (232)
..+.+.|..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+. ...++ .+.+.++..+|+|.|
T Consensus 87 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 166 (189)
T 2v44_A 87 ATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIY 166 (189)
T ss_dssp EEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEE
T ss_pred EEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEE
Confidence 7888889889988877777788899999999999999999999999987764 22222 567778888999999
Q ss_pred EEecC
Q psy15206 227 QCKVP 231 (232)
Q Consensus 227 ~C~~~ 231 (232)
+|.|.
T Consensus 167 ~C~a~ 171 (189)
T 2v44_A 167 RCEGR 171 (189)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99974
No 67
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.93 E-value=4.5e-25 Score=164.98 Aligned_cols=220 Identities=15% Similarity=0.184 Sum_probs=137.6
Q ss_pred cCCCeeecCCCcceEeecC--CeEEEEEEecCC-C-CCeEEEEeCcEee-------------------------------
Q psy15206 10 DTPPVILNNSTQLSVAKEG--QSVQLECHAEGH-P-IPTISWRRNFKRL------------------------------- 54 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G--~~v~l~C~~~~~-p-~~~~~W~~~~~~~------------------------------- 54 (232)
..+|.+... +.......| ++++|.|.+.+. | .+.|+|+|++..+
T Consensus 5 ~~~P~v~~~-~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d 83 (323)
T 2wqr_A 5 FTPPTVKIL-QSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLS 83 (323)
T ss_dssp CCCCCCEEE-EECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHT
T ss_pred CCCCEEEEe-CCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCC
Confidence 457888877 333333344 699999999984 4 5799999965432
Q ss_pred -eeEEEEeeeec----Ccee-----ecCCcEEecCCCCceEeecCCcEEEEeeeccC-CCC---eEEEEeCCeeeCCC-C
Q psy15206 55 -GRLHLAIPYTS----PEAQ-----VDTPPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP---TISWRRENNAILPN-G 119 (232)
Q Consensus 55 -~~~~~~~~~~~----~~l~-----v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~---~~~W~~~~~~~~~~-~ 119 (232)
|.|+|...... ..+. ....|......+....+..|+.+.|.|.+.+. |.+ .+.|++++...... .
T Consensus 84 ~g~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~ 163 (323)
T 2wqr_A 84 DRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHST 163 (323)
T ss_dssp TCCEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCC
T ss_pred CCcEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCccccccc
Confidence 23444432211 1111 11123333333444456689999999999885 445 89999975333221 1
Q ss_pred cE--------EeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEE----EEeccEEEeccceeeeeccCeEEEEEE
Q psy15206 120 QT--------IFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVK----VEFAPIVTVQSTRIGQALHHDMDLDCH 187 (232)
Q Consensus 120 ~~--------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~----v~~~p~~~~~~~~~~~~~g~~~~l~C~ 187 (232)
.. ....+.|.|.++..+|.|.|+|.+.|..+. ......+. +..+|.+...+.......|+.++|.|.
T Consensus 164 ~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~-~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~ 242 (323)
T 2wqr_A 164 RKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLP-RALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACL 242 (323)
T ss_dssp CEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSS-SCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEE
T ss_pred CCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCC-CCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEE
Confidence 11 112346999999999999999999987533 11122222 235677665443322234999999999
Q ss_pred eecC-CCC-eEEEeeCCEEecCC------------CeE----EEEEeccccCCceEEEEecC
Q psy15206 188 IEAY-PHP-ILYWAKDGEIVVND------------EYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 188 ~~~~-p~~-~~~W~~~g~~~~~~------------~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|. |.+ .|.|+|||..+... +.+ .|.+......|+|.|+|.|.
T Consensus 243 ~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~ 304 (323)
T 2wqr_A 243 IQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAV 304 (323)
T ss_dssp EEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEE
T ss_pred eeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEE
Confidence 9884 433 79999999876532 122 35555667789999999974
No 68
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.93 E-value=2.7e-24 Score=148.82 Aligned_cols=152 Identities=20% Similarity=0.322 Sum_probs=123.9
Q ss_pred CCCceEeecCCcEEEEeeeccCC-CCeEEEEe-CCeeeCC-CCcEEe-----eCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHP-IPTISWRR-ENNAILP-NGQTIF-----TGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~-~~~~~W~~-~~~~~~~-~~~~~~-----~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.+....+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+.. ..+... ....|.|.++..+|.|.|.|.+.+..+.
T Consensus 8 ~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 87 (191)
T 1epf_A 8 VPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGT 87 (191)
T ss_dssp ESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTE
T ss_pred cCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCc
Confidence 45567788999999999998876 67899999 7776652 223222 2358999999999999999999998754
Q ss_pred ceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC--Ce------EEEEEeccccCCc
Q psy15206 152 GARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND--EY------HSISNFGTSEGTT 223 (232)
Q Consensus 152 ~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~--~~------~~~~~~~~~~~d~ 223 (232)
.....+.+.|..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+... .+ -.|.+.++...|+
T Consensus 88 ~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 167 (191)
T 1epf_A 88 QSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDE 167 (191)
T ss_dssp EEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGC
T ss_pred ceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChhhC
Confidence 466778888888999888888888889999999999999999999999999887521 11 2567778888999
Q ss_pred eEEEEecC
Q psy15206 224 GSLQCKVP 231 (232)
Q Consensus 224 g~Y~C~~~ 231 (232)
|.|+|.|.
T Consensus 168 G~Y~C~a~ 175 (191)
T 1epf_A 168 GTYRCEGR 175 (191)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999974
No 69
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.92 E-value=1e-24 Score=152.02 Aligned_cols=147 Identities=17% Similarity=0.210 Sum_probs=111.0
Q ss_pred eEeecCCcEEEEee---eccCCCCeEEEEeCCeeeCC-----------------CCcEE----eeCCeEEECCCCCCCCe
Q psy15206 84 SVAKEGQSVQLECH---AEGHPIPTISWRRENNAILP-----------------NGQTI----FTGSTLQIPRITKEDRG 139 (232)
Q Consensus 84 ~~~~~g~~~~l~C~---~~~~~~~~~~W~~~~~~~~~-----------------~~~~~----~~~~~l~i~~~~~~~~g 139 (232)
+++..|+.+.|.|. +.+.|.+.+.|+++|..... ...+. .....|.|.+++.+|+|
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 82 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDG 82 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCe
Confidence 56778999999995 55678899999997643210 00111 11236999999999999
Q ss_pred EEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEec------------C
Q psy15206 140 AYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVV------------N 207 (232)
Q Consensus 140 ~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~------------~ 207 (232)
.|.|.+.|..+. ....+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+. .
T Consensus 83 ~Y~C~a~n~~g~-~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~ 161 (203)
T 4fa8_A 83 NYLCRMKLGETE-VTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEK 161 (203)
T ss_dssp EEEEEEEETTEE-EEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECT
T ss_pred EEEEEEEcCCCc-EEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeC
Confidence 999999998776 566788888888888888888888899999999999999999999998754321 2
Q ss_pred CCeE-EEEEeccccCCceEEEEecC
Q psy15206 208 DEYH-SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 208 ~~~~-~~~~~~~~~~d~g~Y~C~~~ 231 (232)
++.+ .+.+.++..+|+|.|+|.|.
T Consensus 162 ~g~l~il~i~~v~~~D~G~YtC~A~ 186 (203)
T 4fa8_A 162 DGSLSVAVDLSLPKPWHLPVTCVGK 186 (203)
T ss_dssp TSCEEEEEEEEECSSCCCCEEEEEE
T ss_pred CCCEEEEEECCCCHHHCEEEEEEEE
Confidence 2223 34456778899999999974
No 70
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.92 E-value=9.4e-24 Score=146.65 Aligned_cols=158 Identities=20% Similarity=0.390 Sum_probs=124.1
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee-CC---eEEECCCCCCCCeEEEEEeEe
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT-GS---TLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~---~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......... .+ .|.|.++..+|.|.|+|.+.+
T Consensus 6 ~~P~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 6 EAPGIRK-EMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp EEEEEEE-CCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCcccc-cCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 3455544 566778889999999999988888899999999888655554333 22 799999999999999999998
Q ss_pred CCCCceeeEEEEEEEeccEEEec---cceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EEEEE
Q psy15206 148 GIGRGARRKIEVKVEFAPIVTVQ---STRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HSISN 215 (232)
Q Consensus 148 ~~~~~~~~~~~l~v~~~p~~~~~---~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~~~~ 215 (232)
..+. ......+.|..+|.+... +....+..|+.+.|.|.+.+.|.+.+.|+++|..+....+ ..+.+
T Consensus 85 ~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i 163 (197)
T 3lcy_A 85 EVGE-VETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVM 163 (197)
T ss_dssp SSCE-EEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEE
T ss_pred CCCc-eeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEE
Confidence 7765 556677777777765432 3445677899999999999999999999999988875544 45566
Q ss_pred ecccc-CCceEEEEecC
Q psy15206 216 FGTSE-GTTGSLQCKVP 231 (232)
Q Consensus 216 ~~~~~-~d~g~Y~C~~~ 231 (232)
.++.. .|+|.|+|.|.
T Consensus 164 ~~~~~~~d~G~Y~C~a~ 180 (197)
T 3lcy_A 164 KNVQRKTHAGKYKVQLS 180 (197)
T ss_dssp SSCCHHHHCEEEEEEEE
T ss_pred ccccchhhCceEEEEEE
Confidence 66663 79999999974
No 71
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.92 E-value=1.3e-23 Score=155.68 Aligned_cols=215 Identities=19% Similarity=0.293 Sum_probs=150.3
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee-----------------------------eeEEEE
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL-----------------------------GRLHLA 60 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~-----------------------------~~~~~~ 60 (232)
..+|.|... +.+..+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|.
T Consensus 2 ~~~P~~~~~-p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 80 (305)
T 2nzi_A 2 AMAPHFKEE-LRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (305)
T ss_dssp CCCCEEEEC-CCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEE
T ss_pred CCCCeeeec-ccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEE
Confidence 358999988 88999999999999999999999999999954322 245554
Q ss_pred eee------ecCceeecCCcEEecC----CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe----eCC
Q psy15206 61 IPY------TSPEAQVDTPPVILNN----SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF----TGS 126 (232)
Q Consensus 61 ~~~------~~~~l~v~~~p~~~~~----~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~----~~~ 126 (232)
... ....|.|..+|.+... .+....+..|+.+.|.|.+.+.|.+.+.|++++..+....+... ...
T Consensus 81 a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~ 160 (305)
T 2nzi_A 81 ATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFT 160 (305)
T ss_dssp EEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEE
T ss_pred EEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCce
Confidence 422 1455666655544321 12445677899999999999999999999999887755444332 235
Q ss_pred eEEECC-CCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEE----ec---cceee------eeccCeEEEEEEeecCC
Q psy15206 127 TLQIPR-ITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVT----VQ---STRIG------QALHHDMDLDCHIEAYP 192 (232)
Q Consensus 127 ~l~i~~-~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~----~~---~~~~~------~~~g~~~~l~C~~~~~p 192 (232)
.|.|.+ +...|.|.|+|.+.|..|. ....+.+.|...|... .. ..... ...|....+.|.+...+
T Consensus 161 ~l~i~~~~~~~d~G~Y~C~a~N~~G~-~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~ 239 (305)
T 2nzi_A 161 SLVFPNGVERKDAGFYVVCAKNRFGI-DQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCA 239 (305)
T ss_dssp EEEETTCCCSTTCEEEEEEEEETTEE-EEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEE
T ss_pred EEEEecCCccCccEEEEEEEEeCCCc-eeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEec
Confidence 789999 9999999999999998887 5566777777554311 10 01111 01234445566666666
Q ss_pred CCeEEEeeCCEEecCCCeEEEEEeccccCCceEEEEec
Q psy15206 193 HPILYWAKDGEIVVNDEYHSISNFGTSEGTTGSLQCKV 230 (232)
Q Consensus 193 ~~~~~W~~~g~~~~~~~~~~~~~~~~~~~d~g~Y~C~~ 230 (232)
.+...|.+.+... ...+.+.+....+.|.|+|.|
T Consensus 240 ~~~~~w~~~~~~~----~~~~~i~~l~~~~~y~~~~~A 273 (305)
T 2nzi_A 240 TTAERWLRVGQAR----ETRYTVINLFGKTSYQFRVIA 273 (305)
T ss_dssp TTSCCEEEEEEES----SSEEEECSCCSSCEEEEEEEE
T ss_pred CCCCccEECcccc----CceEEecCCCCCCeEEEEEEE
Confidence 6667787655433 335566678889999999987
No 72
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.92 E-value=4.4e-27 Score=194.36 Aligned_cols=224 Identities=21% Similarity=0.334 Sum_probs=0.0
Q ss_pred CCcccCCCeeecCC--CcceEeecCCeEEEEEEecCCCCCe-EEEEeCcE------------------------------
Q psy15206 6 ESQVDTPPVILNNS--TQLSVAKEGQSVQLECHAEGHPIPT-ISWRRNFK------------------------------ 52 (232)
Q Consensus 6 ~~~~~~~P~i~~~~--~~~~~~~~G~~v~l~C~~~~~p~~~-~~W~~~~~------------------------------ 52 (232)
.+.|..+|.+.... .+...+.+|+.++|.|.+.+.|.+. +.|++++.
T Consensus 414 ~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (772)
T 3v2a_R 414 SLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQG 493 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccC
Confidence 45667788875431 1223488999999999999988886 99998511
Q ss_pred ------------------------------eeeeEEEEeeee------cCceeecCCcEEecCCCCceEeecCCcEEEEe
Q psy15206 53 ------------------------------RLGRLHLAIPYT------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLEC 96 (232)
Q Consensus 53 ------------------------------~~~~~~~~~~~~------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C 96 (232)
..|.|.|..... .+.+.|..+|.+.. .+. ..+.+|+.+.|.|
T Consensus 494 g~~i~~~~~~~~~~~~~~~~~~~L~i~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~~-~p~-~~~~~G~~v~l~C 571 (772)
T 3v2a_R 494 GNKIEVNKNQFALIEGKNKTVSTLVIQAANVSALYKCEAVNKVGRGERVISFHVTRGPEITL-QPD-MQPTEQESVSLWC 571 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcEEEeccceeeccCcceEEEEEEEeecccCeEEEEEEEccccccceeEEEEEECCceeec-cCC-cccccCCceEEEE
Confidence 113444443211 44555655554432 222 3466899999999
Q ss_pred eeccCCCCeEEEEeCCeeeCCCCcEE---------------------e---eCCeEEECCCCCCCCeEEEEEeEeCCCC-
Q psy15206 97 HAEGHPIPTISWRRENNAILPNGQTI---------------------F---TGSTLQIPRITKEDRGAYYCVAQNGIGR- 151 (232)
Q Consensus 97 ~~~~~~~~~~~W~~~~~~~~~~~~~~---------------------~---~~~~l~i~~~~~~~~g~y~C~~~~~~~~- 151 (232)
.+.+.|.+.+.|++++..+....... . ....|.|.++..+|.|.|.|.+.|..+.
T Consensus 572 ~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 651 (772)
T 3v2a_R 572 TADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKK 651 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCe
Confidence 99999888999999886643211100 0 0124999999999999999999985433
Q ss_pred ceee--EEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC-------eEEEEEeccccCC
Q psy15206 152 GARR--KIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE-------YHSISNFGTSEGT 222 (232)
Q Consensus 152 ~~~~--~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~-------~~~~~~~~~~~~d 222 (232)
.... .+.+.+..+|.+...+.+..+..|+.+.|.|.+.|.|.|.|.|+|+|..+..+. ...|.+.++..+|
T Consensus 652 ~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D 731 (772)
T 3v2a_R 652 RHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKED 731 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCCcEEEECcCCHHH
Confidence 2222 333334678888777777788899999999999999999999999998776443 3466777888899
Q ss_pred ceEEEEecC
Q psy15206 223 TGSLQCKVP 231 (232)
Q Consensus 223 ~g~Y~C~~~ 231 (232)
+|.|+|.|.
T Consensus 732 ~G~Y~C~a~ 740 (772)
T 3v2a_R 732 EGLYTCQAC 740 (772)
T ss_dssp ---------
T ss_pred CEEEEEEEE
Confidence 999999984
No 73
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.92 E-value=1.9e-23 Score=144.16 Aligned_cols=152 Identities=20% Similarity=0.441 Sum_probs=116.2
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC--CCcE-EeeCCeEEECCCCCCCCeEEEEEeEeCCCC-ceee
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP--NGQT-IFTGSTLQIPRITKEDRGAYYCVAQNGIGR-GARR 155 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~--~~~~-~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~-~~~~ 155 (232)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..+. ...++.|.|.++..+|.|.|+|.+.+..+. ....
T Consensus 8 ~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 87 (189)
T 2v5t_A 8 VVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFR 87 (189)
T ss_dssp CCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEE
T ss_pred cCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEE
Confidence 45667888999999999999888889999999877643 2222 234568999999999999999999987643 2345
Q ss_pred EEEEEEEeccEEEeccc--eeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeE-------EEEEeccccCCceEE
Q psy15206 156 KIEVKVEFAPIVTVQST--RIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYH-------SISNFGTSEGTTGSL 226 (232)
Q Consensus 156 ~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~-------~~~~~~~~~~d~g~Y 226 (232)
.+.+.+..+|.+...+. ...+..|+.+.|.|.+.|.|.+.+.|+++|..+....++ .+.+.++...|+|.|
T Consensus 88 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 167 (189)
T 2v5t_A 88 DIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPY 167 (189)
T ss_dssp EEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEE
T ss_pred EEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCeeE
Confidence 66777777787765544 345667999999999999999999999999987755433 466777888999999
Q ss_pred EEecC
Q psy15206 227 QCKVP 231 (232)
Q Consensus 227 ~C~~~ 231 (232)
+|.|.
T Consensus 168 ~C~a~ 172 (189)
T 2v5t_A 168 VCRAT 172 (189)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99974
No 74
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.92 E-value=1.1e-22 Score=149.11 Aligned_cols=158 Identities=23% Similarity=0.402 Sum_probs=128.7
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe----eCCeEEECCCCCCCCeEEEEEeEe
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF----TGSTLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+........ ....|.|.++...|.|.|+|.+.+
T Consensus 4 ~pP~~~~-~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 82 (284)
T 2rik_A 4 APPFFDL-KPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82 (284)
T ss_dssp CCCEEEE-CCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEc-cccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEE
Confidence 4565554 56677888999999999999988889999999988765544332 235799999999999999999999
Q ss_pred CCCCceeeEEEEEEEeccEEEecc-ceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EEEEEec
Q psy15206 148 GIGRGARRKIEVKVEFAPIVTVQS-TRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HSISNFG 217 (232)
Q Consensus 148 ~~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~~~~~~ 217 (232)
..+. ....+.+.|..+|.+.... ....+..|+.+.|.|.+.|.|.+.+.|+++|..+..... ..|.+.+
T Consensus 83 ~~g~-~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 161 (284)
T 2rik_A 83 VAGK-DSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYN 161 (284)
T ss_dssp TTEE-EEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECS
T ss_pred CCce-EEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECC
Confidence 8766 5677888888888876553 345678899999999999999999999999988765433 4577778
Q ss_pred cccCCceEEEEecC
Q psy15206 218 TSEGTTGSLQCKVP 231 (232)
Q Consensus 218 ~~~~d~g~Y~C~~~ 231 (232)
+...|+|.|+|.+.
T Consensus 162 ~~~~d~G~Y~C~a~ 175 (284)
T 2rik_A 162 LSVEDSGDYTCEAH 175 (284)
T ss_dssp CCGGGCEEEEEEEE
T ss_pred CCcccCEEEEEEEE
Confidence 88899999999874
No 75
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.92 E-value=1.1e-23 Score=148.03 Aligned_cols=153 Identities=19% Similarity=0.350 Sum_probs=121.6
Q ss_pred CCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeee------------CCCCcEEeeCCeEEECCCCCCCCeEEEEEeE
Q psy15206 79 NSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAI------------LPNGQTIFTGSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 79 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~------------~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
..+....+.+|+.+.|.|.+.+.+.+.+.|++++..+ ....+.......|.|.++...|.|.|+|.+.
T Consensus 6 ~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~ 85 (212)
T 1f97_A 6 TAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVS 85 (212)
T ss_dssp CSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEE
T ss_pred ecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEEEE
Confidence 3566677889999999999998888899999987552 1233455556889999999999999999999
Q ss_pred eCCCC-ceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEE-eecCCCCeEEEeeCCE-EecCC---------------
Q psy15206 147 NGIGR-GARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCH-IEAYPHPILYWAKDGE-IVVND--------------- 208 (232)
Q Consensus 147 ~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~-~~~~p~~~~~W~~~g~-~~~~~--------------- 208 (232)
+..+. .....+.+.|..+|.+...+....+..|+.+.|.|. +.+.|.+.+.|+++|. .+...
T Consensus 86 ~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~ 165 (212)
T 1f97_A 86 EEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTID 165 (212)
T ss_dssp ETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEEC
T ss_pred ccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEec
Confidence 97653 245677888888887655555567889999999999 7999999999999998 65431
Q ss_pred -CeEEEEEeccccCCceEEEEecC
Q psy15206 209 -EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 -~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
....+.+.++..+|+|.|+|.|.
T Consensus 166 ~~~~~L~i~~~~~~d~G~Y~C~a~ 189 (212)
T 1f97_A 166 PKSGDLIFDPVTAFDSGEYYCQAQ 189 (212)
T ss_dssp TTTCCEEESSCCGGGCEEEEEEEE
T ss_pred CCCceEEEEecChhhCcEEEEEEc
Confidence 23456777888899999999974
No 76
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.91 E-value=3.7e-24 Score=166.61 Aligned_cols=219 Identities=18% Similarity=0.232 Sum_probs=138.7
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCC-CCC-eEEEEeCcEee-----------------------------eeEEEE
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGH-PIP-TISWRRNFKRL-----------------------------GRLHLA 60 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~-p~~-~~~W~~~~~~~-----------------------------~~~~~~ 60 (232)
+|.+... ++...+.+|++++|.|.+.+. |.+ .+.|++++... |.|.|.
T Consensus 123 ~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dg~Y~C~ 201 (444)
T 1igt_B 123 APSVYPL-APVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCN 201 (444)
T ss_dssp CCEEEEE-CCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTTSCCEEE
T ss_pred CCceeEe-cccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCCCeEEEE
Confidence 5666544 233345899999999999974 665 99999854321 345555
Q ss_pred eeeec----C--cee------------------ecCCcEEecCCCCceE-eecCCcEEEEeeeccCC----CCeEEEEeC
Q psy15206 61 IPYTS----P--EAQ------------------VDTPPVILNNSPQLSV-AKEGQSVQLECHAEGHP----IPTISWRRE 111 (232)
Q Consensus 61 ~~~~~----~--~l~------------------v~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~~~~----~~~~~W~~~ 111 (232)
..... . .+. +..+|.+....+.... +..|+.+.|.|.+.|.+ .+.+.|+++
T Consensus 202 a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~ 281 (444)
T 1igt_B 202 VAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVN 281 (444)
T ss_dssp EEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEET
T ss_pred EEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEEC
Confidence 43321 1 111 1113433222232222 46899999999998873 358999999
Q ss_pred CeeeCCCCc---EE------eeCCeEEECCCCCCCCeEEEEEeEeCCCCce-eeEEEE--EEEeccEEEeccceeeeecc
Q psy15206 112 NNAILPNGQ---TI------FTGSTLQIPRITKEDRGAYYCVAQNGIGRGA-RRKIEV--KVEFAPIVTVQSTRIGQALH 179 (232)
Q Consensus 112 ~~~~~~~~~---~~------~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~-~~~~~l--~v~~~p~~~~~~~~~~~~~g 179 (232)
+..+..... .. ...+.|.|.++..+|.|.|+|.+.|..+... ...+.+ .+..+|.+...+.......+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~ 361 (444)
T 1igt_B 282 NVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTK 361 (444)
T ss_dssp TEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTS
T ss_pred CccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccC
Confidence 987643211 11 1234799999999999999999999876532 233322 34567877655443222345
Q ss_pred CeEEEEEEeec-CCCC-eEEEeeCCEEecC----------CCeEEE----EEeccccCCceEEEEecC
Q psy15206 180 HDMDLDCHIEA-YPHP-ILYWAKDGEIVVN----------DEYHSI----SNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 180 ~~~~l~C~~~~-~p~~-~~~W~~~g~~~~~----------~~~~~~----~~~~~~~~d~g~Y~C~~~ 231 (232)
..+.|.|.+.| .|.+ .|.|+|+|..+.. ++.+.+ .+......|.|.|+|.|.
T Consensus 362 ~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~ 429 (444)
T 1igt_B 362 KQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVV 429 (444)
T ss_dssp SEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEE
T ss_pred CeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEE
Confidence 56999999998 4555 8999999987632 222322 233334467999999984
No 77
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.91 E-value=9.8e-23 Score=142.65 Aligned_cols=145 Identities=15% Similarity=0.182 Sum_probs=111.1
Q ss_pred ceEeecCCcEEEEeeecc-CCCCeEEEEeCCeeeCCCCcEEee-C---C--eEEECCCCCCCCeEEEEEeEeCCCCceee
Q psy15206 83 LSVAKEGQSVQLECHAEG-HPIPTISWRRENNAILPNGQTIFT-G---S--TLQIPRITKEDRGAYYCVAQNGIGRGARR 155 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~~~~~~~~~~~~~-~---~--~l~i~~~~~~~~g~y~C~~~~~~~~~~~~ 155 (232)
...+.+|..+.|.|.+.+ .|.+.+.|+++|..+....+.... + + +|.|.++..+|.|.|+|.+.|. . ...
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng--~-a~~ 87 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDG--K-ATN 87 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEET--T-EEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECC--C-eEE
Confidence 456778999999999865 688999999999998655443321 1 2 6999999999999999999993 3 222
Q ss_pred EEEEEEE---------------------eccEEEeccceeeeeccCeEEEEEEeecC-CCCeEEEeeCCEEecCC-----
Q psy15206 156 KIEVKVE---------------------FAPIVTVQSTRIGQALHHDMDLDCHIEAY-PHPILYWAKDGEIVVND----- 208 (232)
Q Consensus 156 ~~~l~v~---------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~W~~~g~~~~~~----- 208 (232)
...+.+. .+|.+.... ...+..|+++.|.|.+.|. |.|.+.|+|||..+..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~~ 166 (207)
T 3rbs_A 88 HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF 166 (207)
T ss_dssp EEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCCC
T ss_pred EEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceEc
Confidence 2222210 146655444 4678899999999999998 99999999999988532
Q ss_pred --CeEEEEEeccccCCceEEEEecC
Q psy15206 209 --EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 --~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+...|.+.++..+|+|.|+|.|.
T Consensus 167 ~~~~~~L~I~~v~~~D~G~Y~C~a~ 191 (207)
T 3rbs_A 167 KDGICTLLITEFSKKDAGIYEVILK 191 (207)
T ss_dssp SSEEEEEEETTCCGGGCEEEEEEEE
T ss_pred CCCEEEEEECCCCcccCEEEEEEEE
Confidence 33468888999999999999974
No 78
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.91 E-value=1.3e-22 Score=140.36 Aligned_cols=147 Identities=24% Similarity=0.438 Sum_probs=118.8
Q ss_pred ceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee--CCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEE
Q psy15206 83 LSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT--GSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVK 160 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~--~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~ 160 (232)
...+.+|+.+.|.|.+.+.+.+.+.|++++..+....+.... ...|.|.++...|.|.|.|.+.+..+. ....+.+.
T Consensus 13 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~ 91 (192)
T 2va4_A 13 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGE-DEKQAFLQ 91 (192)
T ss_dssp EEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEE
T ss_pred EEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccc-cceEEEEE
Confidence 456778999999999998888899999999887665554432 457999999999999999999998765 44667788
Q ss_pred EEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeC--CEEecCC--------------CeEEEEEeccccCCce
Q psy15206 161 VEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKD--GEIVVND--------------EYHSISNFGTSEGTTG 224 (232)
Q Consensus 161 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~--g~~~~~~--------------~~~~~~~~~~~~~d~g 224 (232)
|..+|.+...+. ..+..|+.+.|.|.+.|.|.+.+.|+++ +..+... ....+.+.++..+|+|
T Consensus 92 V~~~p~~~~~~~-~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 170 (192)
T 2va4_A 92 VFVQPHIIQLKN-ETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSG 170 (192)
T ss_dssp EEEEEEEEEECC-EEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCE
T ss_pred EEccCcccccCc-ceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCE
Confidence 888887765443 4566799999999999999999999998 5555431 1256778888889999
Q ss_pred EEEEecC
Q psy15206 225 SLQCKVP 231 (232)
Q Consensus 225 ~Y~C~~~ 231 (232)
.|+|.|.
T Consensus 171 ~Y~C~a~ 177 (192)
T 2va4_A 171 RYDCEAA 177 (192)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999874
No 79
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.91 E-value=1.8e-23 Score=147.52 Aligned_cols=159 Identities=25% Similarity=0.485 Sum_probs=120.9
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCC----CcEEeeCCeE----EECCCCCCCCeEEEE
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPN----GQTIFTGSTL----QIPRITKEDRGAYYC 143 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~----~~~~~~~~~l----~i~~~~~~~~g~y~C 143 (232)
.+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .+....++.+ .|.++...|.|.|+|
T Consensus 8 ~~P~i~~-~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 8 QSPRIIE-HPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCEEEE-CCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred CCCEEec-CCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 3455544 566678889999999999998888899999999887543 1222333333 577889999999999
Q ss_pred EeEeCCCCceeeEEEEEEEe-ccEEEeccceeeeeccCeEEEEEEe-ecCCCCeEEEeeCCEEecC--------CCeE--
Q psy15206 144 VAQNGIGRGARRKIEVKVEF-APIVTVQSTRIGQALHHDMDLDCHI-EAYPHPILYWAKDGEIVVN--------DEYH-- 211 (232)
Q Consensus 144 ~~~~~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~g~~~~~--------~~~~-- 211 (232)
.+.+..+........+.|.. +|.+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+.. ..++
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~ 166 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRI 166 (217)
T ss_dssp EEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEE
T ss_pred EEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEe
Confidence 99997765434455666654 4555555666778899999999998 8999999999999988762 2222
Q ss_pred ----EEEEeccccCCceEEEEecC
Q psy15206 212 ----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 212 ----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|.+.+++..|+|.|+|.|.
T Consensus 167 ~~~~~L~i~~~~~~d~G~Y~C~a~ 190 (217)
T 2vr9_A 167 VDGGNLLISNVEPIDEGNYKCIAQ 190 (217)
T ss_dssp ETTTEEEESSCCSTTCEEEEEEEE
T ss_pred cCCCcEEEeeCCHHHCeEEEEEEE
Confidence 57777888899999999974
No 80
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.91 E-value=1.4e-23 Score=173.52 Aligned_cols=210 Identities=20% Similarity=0.248 Sum_probs=96.9
Q ss_pred CcceEeecC--CeEEEEEEecCCCCCeEEEEeC--cEee-------------------------eeEEEEeeee-----c
Q psy15206 20 TQLSVAKEG--QSVQLECHAEGHPIPTISWRRN--FKRL-------------------------GRLHLAIPYT-----S 65 (232)
Q Consensus 20 ~~~~~~~~G--~~v~l~C~~~~~p~~~~~W~~~--~~~~-------------------------~~~~~~~~~~-----~ 65 (232)
+..+.+.+| ++++|.|.+.+ |.+.+.|+++ +... |.|+|..... .
T Consensus 133 ~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s 211 (772)
T 3v2a_R 133 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQS 211 (772)
T ss_dssp EEEEEEESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEEETTEEEEC
T ss_pred ceeEEEecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCCCceeecCCCCCeEecCCChhhCeEEEEEEEECCceEEE
Confidence 456778899 99999999987 7789999995 2211 3677766332 1
Q ss_pred --CceeecCC--cEEecCCCCceEeecCCcEEEEeeecc--CCCCeEEEEeCCeeeCCCCc------------EEeeCCe
Q psy15206 66 --PEAQVDTP--PVILNNSPQLSVAKEGQSVQLECHAEG--HPIPTISWRRENNAILPNGQ------------TIFTGST 127 (232)
Q Consensus 66 --~~l~v~~~--p~~~~~~~~~~~~~~g~~~~l~C~~~~--~~~~~~~W~~~~~~~~~~~~------------~~~~~~~ 127 (232)
..+.+... +......+....+.+|+.+.|.|.+.+ .+.+.+.|++++..+..... .....+.
T Consensus 212 ~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (772)
T 3v2a_R 212 IMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLST 291 (772)
T ss_dssp CEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEE
T ss_pred EEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEE
Confidence 22222222 122222333457889999999999987 34567999998876433211 1223457
Q ss_pred EEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEecc---ceeeeeccCeEEEEEEeecCCCCeEEEeeCCEE
Q psy15206 128 LQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQS---TRIGQALHHDMDLDCHIEAYPHPILYWAKDGEI 204 (232)
Q Consensus 128 l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~---~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~ 204 (232)
|.|.++..+|.|.|+|.+.+..+. ....+.+.|..+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|+++|..
T Consensus 292 L~i~~v~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~ 370 (772)
T 3v2a_R 292 LTIDGVTRSDQGLYTCAASSGLMT-KKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIP 370 (772)
T ss_dssp EEESSCCSTTCSEEEEEEECSSCE-EEEEEEEEEECCCC-----------------------------------------
T ss_pred EEECcCCcCCCeEEEEEEEcCCcc-eeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEe
Confidence 999999999999999999987765 5677788888888665433 345678899999999999999999999999987
Q ss_pred ecCC----CeEEEEEeccccCCceEEEEecC
Q psy15206 205 VVND----EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 205 ~~~~----~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+... ....+.+.++...|+|.|+|.|.
T Consensus 371 l~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 401 (772)
T 3v2a_R 371 LESNHTIKAGHVLTIMEVSERDTGNYTVILT 401 (772)
T ss_dssp -------------------------------
T ss_pred CCCCceEccceeEEEecCChhcCceEEEEEE
Confidence 7643 23567777888899999999874
No 81
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.91 E-value=2.2e-22 Score=153.93 Aligned_cols=150 Identities=24% Similarity=0.465 Sum_probs=123.5
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeC--CeeeCC-----CCcEEee----CCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRRE--NNAILP-----NGQTIFT----GSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~--~~~~~~-----~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
+....+.+|+.+.|.|.+.|.|.+.+.|+++ +..+.. ..+.... .+.|.|.++..+|.|.|.|.+.|..
T Consensus 7 ~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 86 (389)
T 2jll_A 7 LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRI 86 (389)
T ss_dssp CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSS
T ss_pred cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCC
Confidence 4456777899999999999999999999999 776643 2333322 3589999999999999999999988
Q ss_pred CCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC-----------eEEEEEecc
Q psy15206 150 GRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE-----------YHSISNFGT 218 (232)
Q Consensus 150 ~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~-----------~~~~~~~~~ 218 (232)
|. ....+.|.|..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+.... ...|.+.++
T Consensus 87 g~-~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~ 165 (389)
T 2jll_A 87 GG-HQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPT 165 (389)
T ss_dssp CE-EEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCC
T ss_pred CC-cceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCC
Confidence 87 567888999999988766665567889999999999999999999999998876432 345777788
Q ss_pred ccCCceEEEEecC
Q psy15206 219 SEGTTGSLQCKVP 231 (232)
Q Consensus 219 ~~~d~g~Y~C~~~ 231 (232)
...|+|.|+|.|.
T Consensus 166 ~~~d~G~Y~C~a~ 178 (389)
T 2jll_A 166 SDNDFGRYNCTAT 178 (389)
T ss_dssp STTSSEEEEEEEE
T ss_pred ChhhCEEEEEEEE
Confidence 8899999999873
No 82
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.90 E-value=7.9e-23 Score=142.92 Aligned_cols=142 Identities=18% Similarity=0.232 Sum_probs=113.4
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCe-EEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPT-ISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
.+....+.+|+.+.|.|.+.+.+.+. +.|++++..+.... +.|.|.++..+|+|.|+|.+.+.. .+..+.
T Consensus 13 ~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~------~~L~i~~v~~~D~G~Y~C~a~n~~---~s~~~~ 83 (204)
T 3sgj_C 13 EPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA------SSYFIDAATVDDSGEYRCQTQLST---LSDPVQ 83 (204)
T ss_dssp ESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS------SEEEESSCCGGGCEEEEEEETTSB---CCCCEE
T ss_pred cCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc------cEEEEecccccCCEEEEEEeCCCc---ccccEE
Confidence 34446788999999999999887765 99999998775432 689999999999999999998743 345677
Q ss_pred EEEEeccEEEeccceeeeeccCeEEEEEEeecC-CCCeEEEeeCCEEec-CCCeEEEEEeccccCCceEEEEecC
Q psy15206 159 VKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAY-PHPILYWAKDGEIVV-NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 159 l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~W~~~g~~~~-~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|..+|.+...+. ..+..|+.+.|.|.+.+. |.+.+.|+|+|..+. ......|.+.++..+|+|.|+|.|.
T Consensus 84 l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 157 (204)
T 3sgj_C 84 LEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGL 157 (204)
T ss_dssp EEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEE
T ss_pred EEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecccCCceEEECcCCcccCEEEEEEEE
Confidence 88888777665554 567789999999999665 557899999998764 2234467777888999999999974
No 83
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.90 E-value=7.3e-23 Score=143.80 Aligned_cols=158 Identities=23% Similarity=0.481 Sum_probs=118.4
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC------cEEeeCCe-----EEECCCCCCCCeEE
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG------QTIFTGST-----LQIPRITKEDRGAY 141 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~------~~~~~~~~-----l~i~~~~~~~~g~y 141 (232)
+|.+. ..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .....++. +.|.++...|.|.|
T Consensus 9 pp~i~-~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 9 PPRIV-EHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEE-ECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred Cccee-cCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 34444 35677788899999999999888888999999998764322 12222333 34456689999999
Q ss_pred EEEeEeCCCCceeeEEEEEEEe-ccEEEeccceeeeeccCeEEEEEEe-ecCCCCeEEEeeCCEEecCCCe------EEE
Q psy15206 142 YCVAQNGIGRGARRKIEVKVEF-APIVTVQSTRIGQALHHDMDLDCHI-EAYPHPILYWAKDGEIVVNDEY------HSI 213 (232)
Q Consensus 142 ~C~~~~~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~g~~~~~~~~------~~~ 213 (232)
+|.+.+..+......+.+.|.. ++.+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+..... ..+
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~L 167 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKL 167 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETTEE
T ss_pred EEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCCeE
Confidence 9999997765334456666655 3444455666778899999999998 8999999999999998874321 256
Q ss_pred EEeccccCCceEEEEecC
Q psy15206 214 SNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 214 ~~~~~~~~d~g~Y~C~~~ 231 (232)
.+.++...|+|.|+|.|.
T Consensus 168 ~i~~~~~~d~G~Y~C~a~ 185 (212)
T 2v9r_A 168 MITYTRKSDAGKYVCVGT 185 (212)
T ss_dssp EESSCCGGGCEEEEEEEE
T ss_pred EEeeCCHhhCeeEEEEEe
Confidence 777788899999999874
No 84
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.90 E-value=2.5e-22 Score=148.79 Aligned_cols=159 Identities=20% Similarity=0.398 Sum_probs=121.4
Q ss_pred cCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe--eC---CeEEECCCCC-CCCeEEEEE
Q psy15206 71 DTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF--TG---STLQIPRITK-EDRGAYYCV 144 (232)
Q Consensus 71 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~--~~---~~l~i~~~~~-~~~g~y~C~ 144 (232)
..+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+........ .. ..|.|.++.. .|.|.|+|.
T Consensus 4 ~~~P~~~~-~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 4 EEPPRFIK-EPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCCEEEE-CCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred ccCCeeee-cCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 34566654 56677888999999999999999999999999987644322221 11 4699999998 999999999
Q ss_pred eEeCCCCceeeEEEEEEEec-------cEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC---------
Q psy15206 145 AQNGIGRGARRKIEVKVEFA-------PIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND--------- 208 (232)
Q Consensus 145 ~~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~--------- 208 (232)
+.+..+. ....+.+.|..+ |.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+...
T Consensus 83 a~n~~g~-~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~ 161 (304)
T 2yd9_A 83 AQNSVGE-ITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQL 161 (304)
T ss_dssp EECSSCE-ECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEEC
T ss_pred EECCCCe-EEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeC
Confidence 9998776 556778888764 67777777778889999999999999999999999999876532
Q ss_pred CeEEEEEeccccCCceEEEEecC
Q psy15206 209 EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
....|.+.++...|+|.|+|.|.
T Consensus 162 ~~~~L~i~~~~~~d~G~Y~C~a~ 184 (304)
T 2yd9_A 162 RSGALQIESSEETDQGKYECVAT 184 (304)
T ss_dssp TTSCEEECSCCGGGCEEEEEEEE
T ss_pred CCeEEEEccCCcccCEEEEEEEE
Confidence 11257777888899999999874
No 85
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.90 E-value=1.6e-23 Score=146.82 Aligned_cols=154 Identities=19% Similarity=0.352 Sum_probs=121.7
Q ss_pred cCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeee------------CCCCcEEeeCCeEEECCCCCCCCeEEEEEe
Q psy15206 78 NNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAI------------LPNGQTIFTGSTLQIPRITKEDRGAYYCVA 145 (232)
Q Consensus 78 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~------------~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~ 145 (232)
...+....+.+|+.+.|.|.+.+.+.+.+.|++++..+ ....+.......|.|.++...|.|.|+|.+
T Consensus 8 ~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~ 87 (209)
T 1nbq_A 8 HSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMV 87 (209)
T ss_dssp ECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEE
T ss_pred EcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEE
Confidence 34566677889999999999998888899999987552 112334445588999999999999999999
Q ss_pred EeCCCC-ceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEe-ecCCCCeEEEeeCCEEecCC---------------
Q psy15206 146 QNGIGR-GARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHI-EAYPHPILYWAKDGEIVVND--------------- 208 (232)
Q Consensus 146 ~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~g~~~~~~--------------- 208 (232)
.+..+. .....+.+.|..+|.+........+..|+.+.|.|.+ .+.|.+.+.|+++|..+...
T Consensus 88 ~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (209)
T 1nbq_A 88 SEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLN 167 (209)
T ss_dssp EETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCC
T ss_pred ecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEc
Confidence 987542 2445677788888876655555668899999999996 89999999999999876542
Q ss_pred -CeEEEEEeccccCCceEEEEecC
Q psy15206 209 -EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 -~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
....|.+.++...|+|.|+|.|.
T Consensus 168 ~~~~~L~i~~~~~~d~G~Y~C~a~ 191 (209)
T 1nbq_A 168 PTTGELVFDPLSASDTGEYSCEAR 191 (209)
T ss_dssp TTTCCEEESSCCGGGCCCEEEEEE
T ss_pred CCcceEEEEeccccCCeEEEEEEe
Confidence 23467788888999999999874
No 86
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.90 E-value=5.1e-23 Score=143.05 Aligned_cols=144 Identities=15% Similarity=0.181 Sum_probs=99.7
Q ss_pred EeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCc---EEeeCCeEEECCCCCCCCeEEEEEeEeCCCC-ceeeEEEEE
Q psy15206 85 VAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQ---TIFTGSTLQIPRITKEDRGAYYCVAQNGIGR-GARRKIEVK 160 (232)
Q Consensus 85 ~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~---~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~-~~~~~~~l~ 160 (232)
.+.+|+++.|.|.+.+.+. .+.|++++..+..... .......|.|.++..+|+|.|+|.+.+..+. ..+..+.+.
T Consensus 15 ~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~ 93 (196)
T 2d3v_A 15 VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELV 93 (196)
T ss_dssp EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEE
T ss_pred cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEE
Confidence 6779999999999987655 8999999876532111 1112357999999999999999999886543 224556777
Q ss_pred EEe---ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC-----------CCeEEEEEeccccCCceEE
Q psy15206 161 VEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN-----------DEYHSISNFGTSEGTTGSL 226 (232)
Q Consensus 161 v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~-----------~~~~~~~~~~~~~~d~g~Y 226 (232)
|.. +|.+...+. ..+..|+.++|.|.+.+.| +.+.|+|+|..+.. .....|.+.+++.+|+|.|
T Consensus 94 V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 171 (196)
T 2d3v_A 94 VTGFYNKPTLSALPS-PVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWML 171 (196)
T ss_dssp EECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEE
T ss_pred ecCCCCCCeEEccCC-ccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeE
Confidence 765 466654443 4677899999999999998 89999999976531 1236788889999999999
Q ss_pred EEecC
Q psy15206 227 QCKVP 231 (232)
Q Consensus 227 ~C~~~ 231 (232)
+|.|.
T Consensus 172 ~C~a~ 176 (196)
T 2d3v_A 172 RCYGS 176 (196)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99974
No 87
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.90 E-value=3.9e-23 Score=155.74 Aligned_cols=210 Identities=19% Similarity=0.289 Sum_probs=129.1
Q ss_pred CcceEeecCCeEEEEEEecCC--CCCeEEEEeCc--Ee--------------------ee--------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGH--PIPTISWRRNF--KR--------------------LG-------------------- 55 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~--p~~~~~W~~~~--~~--------------------~~-------------------- 55 (232)
+.++.+.+|++++|.|.+.+. +.+.+.|+|+. .. .+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 7 SGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 567889999999999999875 36789999851 10 11
Q ss_pred ------eEEEEeee------ecCceeec----CCcEEecCCCCceEeecCCcEEEEeeeccC-CC-CeEEEEeCCeeeCC
Q psy15206 56 ------RLHLAIPY------TSPEAQVD----TPPVILNNSPQLSVAKEGQSVQLECHAEGH-PI-PTISWRRENNAILP 117 (232)
Q Consensus 56 ------~~~~~~~~------~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~~~~~~~ 117 (232)
.|.|.... ....|.|. .+|.+....+ ...+..|+.+.|.|.+.|. |. +.+.|++++..+..
T Consensus 87 ~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~ 165 (344)
T 1za6_B 87 RSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGV 165 (344)
T ss_dssp CGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECC-SCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTE
T ss_pred CcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccc-cccccCCCcEEEEEEEeeEECCCeEEEEecCCccCce
Confidence 23333211 03345554 2333332111 2234579999999999886 54 68999998865310
Q ss_pred --------CCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCce-eeEEEE----------------------EEEeccE
Q psy15206 118 --------NGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGA-RRKIEV----------------------KVEFAPI 166 (232)
Q Consensus 118 --------~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~-~~~~~l----------------------~v~~~p~ 166 (232)
........+.|.|.++..+| |.|+|.+.|..+... ...+.+ .+..+|.
T Consensus 166 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~ 244 (344)
T 1za6_B 166 HTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQ 244 (344)
T ss_dssp EECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCCE
T ss_pred eECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCE
Confidence 11111122368888888878 999999999765421 121111 1234666
Q ss_pred EEeccceeeeeccCeEEEEEEeecCCC--CeEEEeeCCEEecC----------CCeEEE----EEeccccCCceEEEEec
Q psy15206 167 VTVQSTRIGQALHHDMDLDCHIEAYPH--PILYWAKDGEIVVN----------DEYHSI----SNFGTSEGTTGSLQCKV 230 (232)
Q Consensus 167 ~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~g~~~~~----------~~~~~~----~~~~~~~~d~g~Y~C~~ 230 (232)
+...+.......|..+.|.|.+.|+++ +.+.|+|||..+.. ++.+.+ .+......|.|.|+|.|
T Consensus 245 v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a 324 (344)
T 1za6_B 245 VYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSV 324 (344)
T ss_dssp EEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEE
T ss_pred EEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEE
Confidence 655443322335677999999999633 57999999876531 222322 22333336799999997
Q ss_pred C
Q psy15206 231 P 231 (232)
Q Consensus 231 ~ 231 (232)
.
T Consensus 325 ~ 325 (344)
T 1za6_B 325 M 325 (344)
T ss_dssp E
T ss_pred E
Confidence 4
No 88
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.90 E-value=2.7e-22 Score=136.88 Aligned_cols=142 Identities=18% Similarity=0.226 Sum_probs=111.5
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCe-EEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPT-ISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
.+....+.+|+.+.|.|.+.+.+.+. +.|++++..+.. ..+.|.|.++..+|.|.|.|.+.+..+ ...+.
T Consensus 13 ~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~~~n~~~---s~~~~ 83 (175)
T 1fnl_A 13 EPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS------QASSYFIDAATVNDSGEYRCQTNLSTL---SDPVQ 83 (175)
T ss_dssp ESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES------SCSEEEESSCCGGGCEEEEEECSSSCC---CCCEE
T ss_pred cCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC------CceEEEEeCCCcccCEEEEEEeeCCcc---cccEE
Confidence 44555788999999999998887766 889999877643 356899999999999999999987544 34566
Q ss_pred EEEEeccEEEeccceeeeeccCeEEEEEEeecCCCC-eEEEeeCCEEecCC-CeEEEEEeccccCCceEEEEecC
Q psy15206 159 VKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHP-ILYWAKDGEIVVND-EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 159 l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~g~~~~~~-~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|..++.+... ....+..|+.+.|.|.+.+.+++ .+.|+|+|..+... ....|.+.++..+|+|.|+|.|.
T Consensus 84 l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 157 (175)
T 1fnl_A 84 LEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGL 157 (175)
T ss_dssp EEEECSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEE
T ss_pred EEEeCCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCCCCCCEEEEcccChhhCeEEEEEEE
Confidence 777765554443 34567789999999999887665 89999999877522 34567777888899999999874
No 89
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.90 E-value=1.1e-21 Score=137.77 Aligned_cols=145 Identities=17% Similarity=0.238 Sum_probs=111.7
Q ss_pred eecCCcEEEEeeeccC-CCCeEEEEeCCeeeCCCCcEEee--C--CeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEE
Q psy15206 86 AKEGQSVQLECHAEGH-PIPTISWRRENNAILPNGQTIFT--G--STLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVK 160 (232)
Q Consensus 86 ~~~g~~~~l~C~~~~~-~~~~~~W~~~~~~~~~~~~~~~~--~--~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~ 160 (232)
...++.+.|.|.+.+. |.+.+.|++++..+....+.... + ..|.|.++..+|.|.|+|.+.+..+. ....+.+.
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~-~~~~~~l~ 92 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTG-HQKTVDLS 92 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEEEEC
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcc-eEEEEEEE
Confidence 3467888999998885 47789999999988765554332 2 35999999999999999999997665 33444554
Q ss_pred EEe--------------------ccEE-EeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------
Q psy15206 161 VEF--------------------APIV-TVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY--------- 210 (232)
Q Consensus 161 v~~--------------------~p~~-~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~--------- 210 (232)
+.. .|.+ ...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+....+
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~ 172 (212)
T 2r15_A 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGR 172 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTT
T ss_pred EeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCC
Confidence 331 3333 3345667788999999999999999999999999988875443
Q ss_pred -EEEEEeccccCCceEEEEecC
Q psy15206 211 -HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 211 -~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..|.+.++...|+|.|+|.|.
T Consensus 173 ~~~L~i~~~~~~d~G~Y~C~a~ 194 (212)
T 2r15_A 173 TAYFTINGVSTADSGKYGLVVK 194 (212)
T ss_dssp EEEEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEEcCcchHHCeEEEEEEE
Confidence 466777788899999999874
No 90
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.89 E-value=1.7e-22 Score=142.65 Aligned_cols=156 Identities=17% Similarity=0.220 Sum_probs=113.8
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcE---EeeCC--eEEECCCCCCCCeEEEEEeE
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQT---IFTGS--TLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~---~~~~~--~l~i~~~~~~~~g~y~C~~~ 146 (232)
.+|.+.. .+. ..+.+|+++.|.|.+.+ +.+.+.|+++|..+...... ..... .|.|.++..+|+|.|+|.+.
T Consensus 8 ~~P~i~~-~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 8 PMPFISA-KSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp CCCCEEE-SSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CCCEEEe-cCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 3444443 333 46789999999999976 56789999988654321111 11234 89999999999999999999
Q ss_pred eCCCC-ceeeEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEec-----CCCeEEEEEec
Q psy15206 147 NGIGR-GARRKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVV-----NDEYHSISNFG 217 (232)
Q Consensus 147 ~~~~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~-----~~~~~~~~~~~ 217 (232)
+..+. ..+..+.+.|.. +|.+...+ ...+..|++++|.|.+.+.|.+.+.|+|+|..+. ......|.+.+
T Consensus 85 n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~ 163 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGP 163 (218)
T ss_dssp ETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCS
T ss_pred cCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEcc
Confidence 86542 233456777764 56666555 4567899999999976677788999999987654 23456788889
Q ss_pred cccCCceEEEEecC
Q psy15206 218 TSEGTTGSLQCKVP 231 (232)
Q Consensus 218 ~~~~d~g~Y~C~~~ 231 (232)
++.+|+|.|+|.|.
T Consensus 164 v~~~D~G~Y~C~a~ 177 (218)
T 1uct_A 164 VDLNVSGIYRCYGW 177 (218)
T ss_dssp CCGGGCEEEEEEEE
T ss_pred CCcccCEEEEEEEE
Confidence 99999999999974
No 91
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.89 E-value=1.7e-22 Score=157.32 Aligned_cols=209 Identities=17% Similarity=0.222 Sum_probs=136.2
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCc--Ee--------------------e---------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNF--KR--------------------L--------------------- 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~--~~--------------------~--------------------- 54 (232)
+.++.+.+|++++|.|.+.+.+ .+.+.|+|+. .. .
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (444)
T 1igt_B 7 SGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRL 86 (444)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCC
Confidence 5678899999999999998754 6789999831 10 0
Q ss_pred -----eeEEEEeeee---------cCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEEeCCee
Q psy15206 55 -----GRLHLAIPYT---------SPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWRRENNA 114 (232)
Q Consensus 55 -----~~~~~~~~~~---------~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~ 114 (232)
|.|.|..... ...|.|.. +|.+....+. ..+.+|+.+.|.|.+.|. |.+ .+.|++++..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 165 (444)
T 1igt_B 87 KSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 165 (444)
T ss_dssp CGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCC-SSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEeccc-ccCCCCCcEEEEEEEcceeCCCcEEEEecCCCC
Confidence 2334433211 23455542 2333321222 223679999999999884 666 8999998865
Q ss_pred eCC--CC-----cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEE------------------EeccEEEe
Q psy15206 115 ILP--NG-----QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKV------------------EFAPIVTV 169 (232)
Q Consensus 115 ~~~--~~-----~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v------------------~~~p~~~~ 169 (232)
+.. .. ......+.|.|.++..+| |.|+|.+.|..+.. .....+.+ ..+|.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~ 243 (444)
T 1igt_B 166 SGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASST-KVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFI 243 (444)
T ss_dssp TTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTE-EEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEE
T ss_pred CCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCc-ceEEEeccCCCCcccCCccccCCcccCCCceEEe
Confidence 210 00 111123568899999889 99999999987652 22222211 12566534
Q ss_pred ccceee--eeccCeEEEEEEeecCC----CCeEEEeeCCEEecCCC--------------eEEEEEeccccCCceEEEEe
Q psy15206 170 QSTRIG--QALHHDMDLDCHIEAYP----HPILYWAKDGEIVVNDE--------------YHSISNFGTSEGTTGSLQCK 229 (232)
Q Consensus 170 ~~~~~~--~~~g~~~~l~C~~~~~p----~~~~~W~~~g~~~~~~~--------------~~~~~~~~~~~~d~g~Y~C~ 229 (232)
.+.... +..|+.+.|.|.+.|.+ .+.+.|+|+|..+.... ...|.+.++...|+|.|+|.
T Consensus 244 ~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~ 323 (444)
T 1igt_B 244 FPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCK 323 (444)
T ss_dssp ECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEE
T ss_pred cCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEE
Confidence 333322 47899999999999984 35899999998764321 12567777788999999999
Q ss_pred cC
Q psy15206 230 VP 231 (232)
Q Consensus 230 ~~ 231 (232)
|.
T Consensus 324 a~ 325 (444)
T 1igt_B 324 VN 325 (444)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 92
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.89 E-value=8.9e-21 Score=145.01 Aligned_cols=214 Identities=20% Similarity=0.314 Sum_probs=148.1
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeC--cEee--------------------------------eeE
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRN--FKRL--------------------------------GRL 57 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~--~~~~--------------------------------~~~ 57 (232)
+|.|+. +.+..+.+|++++|.|.+.+.|.+.+.|+|+ +..+ |.|
T Consensus 1 ~P~i~~--~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 78 (389)
T 2jll_A 1 QPHIIQ--LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRY 78 (389)
T ss_dssp CCEEEE--CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEE
T ss_pred CCeEEe--cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEE
Confidence 578775 4567888999999999999999999999997 4321 244
Q ss_pred EEEeee------ecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC--cEEee----C
Q psy15206 58 HLAIPY------TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG--QTIFT----G 125 (232)
Q Consensus 58 ~~~~~~------~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~--~~~~~----~ 125 (232)
.|.... ..+.|.|..+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.... +.... .
T Consensus 79 ~C~a~n~~g~~~~~~~l~V~~~P~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 157 (389)
T 2jll_A 79 DCEAASRIGGHQKSMYLDIEYAPKFIS-NQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRK 157 (389)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEEECC-SCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSC
T ss_pred EEEEEeCCCCcceEEEEEEEeCCEEec-CcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCE
Confidence 444421 166777777776654 3444467789999999999999999999999998875433 22221 2
Q ss_pred CeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEee----cCCCC--eEEEe
Q psy15206 126 STLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIE----AYPHP--ILYWA 199 (232)
Q Consensus 126 ~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~--~~~W~ 199 (232)
..|.|.++...|.|.|.|.+.|..|. ....+.+.+...|...... ......+..+.|.|... +.|.. .+.|.
T Consensus 158 ~~L~i~~~~~~d~G~Y~C~a~N~~G~-~~~~~~l~v~~~P~~P~~~-~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~ 235 (389)
T 2jll_A 158 MILEIAPTSDNDFGRYNCTATNHIGT-RFQEYILALADVPSSPYGV-KIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVK 235 (389)
T ss_dssp EEEEECCCSTTSSEEEEEEEEETTEE-EEEEEEEEECCCCCCCEEE-EEEEECSSCEEEEEECCSCCTTSCEEEEEEEEE
T ss_pred EEEEECCCChhhCEEEEEEEEcCCCc-EEEEEEEEecCCCCCCcce-EEeeccCCEEEEEEeCCCCCCCcceEEEEEEEE
Confidence 46999999999999999999998877 4445566655444211100 11223457788998742 22322 47888
Q ss_pred eCCEE----ec-CCCeEEEEEeccccCCceEEEEec
Q psy15206 200 KDGEI----VV-NDEYHSISNFGTSEGTTGSLQCKV 230 (232)
Q Consensus 200 ~~g~~----~~-~~~~~~~~~~~~~~~d~g~Y~C~~ 230 (232)
+++.. +. ......+.+.+....+.+.|.|.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A 271 (389)
T 2jll_A 236 EVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAA 271 (389)
T ss_dssp ETTCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEE
T ss_pred ECCCcccEEeeccCCcceEEECCccCCCEEEEEEEE
Confidence 87641 22 223456667778889999999986
No 93
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.89 E-value=2.3e-22 Score=147.93 Aligned_cols=152 Identities=21% Similarity=0.334 Sum_probs=122.5
Q ss_pred CCCceEeecCCcEEEEeeeccCC-CCeEEEEe-CCeeeCCC-CcEEe-----eCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHP-IPTISWRR-ENNAILPN-GQTIF-----TGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~-~~~~~W~~-~~~~~~~~-~~~~~-----~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.+....+.+|+.+.|.|.+.+.+ .+.+.|++ +|..+... .+... ....|.|.++..+|.|.|+|.+.+..+.
T Consensus 8 ~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~ 87 (291)
T 1qz1_A 8 VPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGT 87 (291)
T ss_dssp ESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred cCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCC
Confidence 45667788999999999999876 57899999 66665432 22221 2358999999999999999999998766
Q ss_pred ceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC--------CeEEEEEeccccCCc
Q psy15206 152 GARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND--------EYHSISNFGTSEGTT 223 (232)
Q Consensus 152 ~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~--------~~~~~~~~~~~~~d~ 223 (232)
.....+.+.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+++|..+... ....|.+.++...|+
T Consensus 88 ~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 167 (291)
T 1qz1_A 88 QSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDE 167 (291)
T ss_dssp EEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGC
T ss_pred eeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccC
Confidence 566778888888898888888888899999999999999999999999998765421 122567778888999
Q ss_pred eEEEEecC
Q psy15206 224 GSLQCKVP 231 (232)
Q Consensus 224 g~Y~C~~~ 231 (232)
|.|+|.+.
T Consensus 168 G~Y~C~a~ 175 (291)
T 1qz1_A 168 GTYRCEGR 175 (291)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 99999874
No 94
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.89 E-value=5.5e-22 Score=146.94 Aligned_cols=157 Identities=18% Similarity=0.335 Sum_probs=123.5
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC-cEEe---eCC--eEEECCCCCCCCeEEEEEeE
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG-QTIF---TGS--TLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~-~~~~---~~~--~l~i~~~~~~~~g~y~C~~~ 146 (232)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... +... .++ .|.|.++..+|.|.|+|.+.
T Consensus 4 ~P~~~~-~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 4 APHFKE-ELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCEEEE-CCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCeeee-cccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 455554 5667888899999999999999999999999998876432 2222 122 79999999999999999999
Q ss_pred eCCCCceeeEEEEEEEeccEEEec-----cceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EE
Q psy15206 147 NGIGRGARRKIEVKVEFAPIVTVQ-----STRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HS 212 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p~~~~~-----~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~ 212 (232)
+..+. ....+.|.|..+|.+... +....+..|+.+.|.|.+.|.|.+.+.|+++|..+....+ ..
T Consensus 83 n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (305)
T 2nzi_A 83 NQGGS-VSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (305)
T ss_dssp ETTEE-EEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEE
T ss_pred cCCCC-ccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceE
Confidence 98776 567778888777765432 2445677899999999999999999999999877664433 45
Q ss_pred EEEec-cccCCceEEEEecC
Q psy15206 213 ISNFG-TSEGTTGSLQCKVP 231 (232)
Q Consensus 213 ~~~~~-~~~~d~g~Y~C~~~ 231 (232)
+.+.+ +...|+|.|+|.|.
T Consensus 162 l~i~~~~~~~d~G~Y~C~a~ 181 (305)
T 2nzi_A 162 LVFPNGVERKDAGFYVVCAK 181 (305)
T ss_dssp EEETTCCCSTTCEEEEEEEE
T ss_pred EEEecCCccCccEEEEEEEE
Confidence 56666 88899999999873
No 95
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.89 E-value=2.6e-22 Score=139.70 Aligned_cols=154 Identities=21% Similarity=0.243 Sum_probs=110.9
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCC---CcEEeeCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPN---GQTIFTGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~---~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
+|.+.. .+. ..+.+|+.+.|.|.+.+.+. .+.|++++..+... .........|.|.++..+|.|.|+|.+.+..
T Consensus 5 ~P~i~~-~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (198)
T 1ugn_A 5 KPTLWA-EPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDT 81 (198)
T ss_dssp CCEEEE-ESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCeEec-cCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCC
Confidence 344433 333 37789999999999988665 69999998765211 1112235689999999999999999999875
Q ss_pred -C-CceeeEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC-----------CeEEE
Q psy15206 150 -G-RGARRKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND-----------EYHSI 213 (232)
Q Consensus 150 -~-~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~-----------~~~~~ 213 (232)
+ ...+..+.+.|.. +|.+...+ ...+..|++++|.|.+.+. .+.+.|+|+|..+... ....|
T Consensus 82 ~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L 159 (198)
T 1ugn_A 82 AGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIF 159 (198)
T ss_dssp TEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEE
T ss_pred CCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEE
Confidence 3 1234566777776 45555444 3567899999999999888 7799999999765311 24678
Q ss_pred EEeccccCCceEEEEecC
Q psy15206 214 SNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 214 ~~~~~~~~d~g~Y~C~~~ 231 (232)
.+.++..+|+|.|+|.|.
T Consensus 160 ~i~~v~~~D~G~Y~C~a~ 177 (198)
T 1ugn_A 160 SVGPVSPSRRWWYRCYAY 177 (198)
T ss_dssp EECCCCTTSCEEEEEEEE
T ss_pred EecccCcccCeEEEEEEE
Confidence 888999999999999974
No 96
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.89 E-value=3.3e-22 Score=137.61 Aligned_cols=150 Identities=17% Similarity=0.211 Sum_probs=111.5
Q ss_pred cCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 71 DTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 71 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
..+|.+.. .+.. .+.+|+++.|.|.+.+ +.+.+.|++++.. .......|.|.++..+|.|.|+|.+.+..+
T Consensus 6 ~~~P~i~~-~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 76 (184)
T 2gi7_A 6 LPKPSLQA-LPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSL 76 (184)
T ss_dssp BCCCEEEE-ESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC------CEESSSEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCCCeEEe-CCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc------ccCcccEEEECcCChhhCceEEEEEEcCCC
Confidence 33454443 3333 6789999999999987 6778999998865 233467899999999999999999998654
Q ss_pred C-ceeeEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC-----CeEEEEEeccccC
Q psy15206 151 R-GARRKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND-----EYHSISNFGTSEG 221 (232)
Q Consensus 151 ~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~-----~~~~~~~~~~~~~ 221 (232)
. ..+..+.+.|.. +|.+...+ ...+..|+.+.|.|.+.+.+ +.+.|+|+|..+... ....|.+.+++.+
T Consensus 77 ~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~~~ 154 (184)
T 2gi7_A 77 WSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPERWYRASFPIITVTAA 154 (184)
T ss_dssp EBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCCEEEEESSSEEEETTC
T ss_pred ccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecCCCceEEEEEccCCcc
Confidence 2 234456666643 56666655 45677899999999987654 699999999876532 2334556678889
Q ss_pred CceEEEEecC
Q psy15206 222 TTGSLQCKVP 231 (232)
Q Consensus 222 d~g~Y~C~~~ 231 (232)
|+|.|+|.|.
T Consensus 155 D~G~Y~C~a~ 164 (184)
T 2gi7_A 155 HSGTYRCYSF 164 (184)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 9999999974
No 97
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.89 E-value=3.3e-22 Score=136.59 Aligned_cols=142 Identities=21% Similarity=0.246 Sum_probs=109.5
Q ss_pred CCCceEeecCCcEEEEeeeccCCCC-eEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIP-TISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
.+....+.+|+++.|.|.+.+.+.+ .+.|++++..+.. ..+.|.|.+++.+|.|.|+|.+.+..+. ..+.
T Consensus 10 ~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~~~~~s---~~~~ 80 (176)
T 1f2q_A 10 NPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE------TNSSLNIVNAKFEDSGEYKCQHQQVNES---EPVY 80 (176)
T ss_dssp ESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC------CSSEEEECSCCGGGCEEEEEECTTSSCC---CCEE
T ss_pred CCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC------CceEEEEeccceecCEEEEEEcCCcccc---ccEE
Confidence 3455678899999999999887775 6999999987653 2568999999999999999999875443 4456
Q ss_pred EEEEeccEEEeccceeeeeccCeEEEEEEee-cCCCCeEEEeeCCEEecC-CCeEEEEEeccccCCceEEEEecC
Q psy15206 159 VKVEFAPIVTVQSTRIGQALHHDMDLDCHIE-AYPHPILYWAKDGEIVVN-DEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 159 l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~g~~~~~-~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|..++.+... ....+..|+.+.|.|.+. +.|.+.+.|+++|..+.. .....+.+.++..+|+|.|+|.|.
T Consensus 81 l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 154 (176)
T 1f2q_A 81 LEVFSDWLLLQA-SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGK 154 (176)
T ss_dssp EEEECSSEEEEE-SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCCSSEEEESSCCGGGCEEEEEEEE
T ss_pred EEEeCcceeecC-CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeecCCCeEEECCCCcccCEEEEEEEE
Confidence 666655544433 335677999999999994 666679999999998753 345677888889999999999874
No 98
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.89 E-value=1e-21 Score=140.69 Aligned_cols=150 Identities=24% Similarity=0.462 Sum_probs=117.1
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC-----cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceee
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG-----QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARR 155 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~-----~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~ 155 (232)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ........|.|.++...|.|.|+|.+.+..+. ...
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~-~~~ 100 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGS-IRQ 100 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEE-EEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCc-eEE
Confidence 345778899999999999998888999999998864322 22334568999999999999999999997665 445
Q ss_pred EEEEEEEe----ccEEEe-ccceeeeeccCeEEEEEEeecCCCCeEEEee----CCEEecCC-----------------C
Q psy15206 156 KIEVKVEF----APIVTV-QSTRIGQALHHDMDLDCHIEAYPHPILYWAK----DGEIVVND-----------------E 209 (232)
Q Consensus 156 ~~~l~v~~----~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~----~g~~~~~~-----------------~ 209 (232)
.+.+.|.. +|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ +|..+..+ .
T Consensus 101 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 180 (241)
T 3grw_A 101 TYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEA 180 (241)
T ss_dssp EEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEE
T ss_pred EEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCC
Confidence 56676654 233333 3556678889999999999999999999999 77665433 2
Q ss_pred eEEEEEeccccCCceEEEEecC
Q psy15206 210 YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 210 ~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
...|.+.++...|+|.|+|.|.
T Consensus 181 ~~~L~i~~~~~~d~G~Y~C~a~ 202 (241)
T 3grw_A 181 DVRLRLANVSERDGGEYLCRAT 202 (241)
T ss_dssp EEEEEECSCCGGGCEEEEEEEE
T ss_pred ceEEEECcCCcccCcEEEEEEe
Confidence 3457788888899999999974
No 99
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.89 E-value=1.8e-22 Score=140.23 Aligned_cols=147 Identities=15% Similarity=0.185 Sum_probs=110.5
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEE---eeCCeEEECCCCCCCCeEEEEEeEeCCC-CceeeE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTI---FTGSTLQIPRITKEDRGAYYCVAQNGIG-RGARRK 156 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~---~~~~~l~i~~~~~~~~g~y~C~~~~~~~-~~~~~~ 156 (232)
+.. .+.+|+++.|.|.+.+ +.+.+.|++++..+....... .....|.|.++..+|+|.|+|.+.|..+ ...+..
T Consensus 12 p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~ 89 (196)
T 3p2t_A 12 PGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDP 89 (196)
T ss_dssp SCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCC
T ss_pred CCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCcc
Confidence 444 7788999999999987 667899999987654311111 1235799999999999999999999766 234556
Q ss_pred EEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC----------CeEEEEEeccccCCc
Q psy15206 157 IEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND----------EYHSISNFGTSEGTT 223 (232)
Q Consensus 157 ~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~----------~~~~~~~~~~~~~d~ 223 (232)
+.+.|.. +|.+...+.. .+..|+.++|.|.+.+. .+.+.|+|+|..+... ....|.+.++..+|+
T Consensus 90 ~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 167 (196)
T 3p2t_A 90 LELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHG 167 (196)
T ss_dssp EEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGC
T ss_pred EEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCC
Confidence 6777753 4566655543 57789999999999874 4689999998765322 234677788899999
Q ss_pred eEEEEecC
Q psy15206 224 GSLQCKVP 231 (232)
Q Consensus 224 g~Y~C~~~ 231 (232)
|.|+|.|.
T Consensus 168 G~Y~C~a~ 175 (196)
T 3p2t_A 168 GTYRCFSS 175 (196)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEE
Confidence 99999974
No 100
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.89 E-value=5.8e-22 Score=137.99 Aligned_cols=152 Identities=18% Similarity=0.293 Sum_probs=115.8
Q ss_pred CCCceEeecCCcEEEEee-eccCCC-CeEEEEeCCeeeCC--CCcEEe--eCCeEEECCCCCCCCeEEEEEeEeCCCCce
Q psy15206 80 SPQLSVAKEGQSVQLECH-AEGHPI-PTISWRRENNAILP--NGQTIF--TGSTLQIPRITKEDRGAYYCVAQNGIGRGA 153 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~-~~~~~~-~~~~W~~~~~~~~~--~~~~~~--~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~ 153 (232)
.+....+.+|+.+.|.|. +.+.|. +.+.|++++..+.. ...... .++.|.|.++..+|.|.|+|.+.+..+...
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcc
Confidence 445678889999999999 888888 89999999877632 222222 356899999999999999999998654322
Q ss_pred e--eEEEEEEE-------eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC-----CeEEEEEeccc
Q psy15206 154 R--RKIEVKVE-------FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND-----EYHSISNFGTS 219 (232)
Q Consensus 154 ~--~~~~l~v~-------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~-----~~~~~~~~~~~ 219 (232)
. ..+.+.+. .+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+... ....+.+.++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~v~ 173 (201)
T 3s97_C 94 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQ 173 (201)
T ss_dssp EECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECSCC
T ss_pred hhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEccCC
Confidence 1 22333332 4566666666777889999999999999999999999999866532 23367778888
Q ss_pred cCCceEEEEecC
Q psy15206 220 EGTTGSLQCKVP 231 (232)
Q Consensus 220 ~~d~g~Y~C~~~ 231 (232)
..|+|.|+|.|.
T Consensus 174 ~~d~G~Y~C~a~ 185 (201)
T 3s97_C 174 LEDEGIYECEAE 185 (201)
T ss_dssp GGGCEEEEEEEE
T ss_pred hhhCEEEEEEEE
Confidence 899999999873
No 101
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.89 E-value=1.8e-21 Score=152.73 Aligned_cols=215 Identities=14% Similarity=0.229 Sum_probs=133.3
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCC-CC-C-eEEEEeCcEe--------------------------------eee
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGH-PI-P-TISWRRNFKR--------------------------------LGR 56 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~-p~-~-~~~W~~~~~~--------------------------------~~~ 56 (232)
+|.+... +. ..+.+|+.++|.|.+.+. |. + .+.|++++.. .|.
T Consensus 127 ~P~i~~~-~~-~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ 204 (475)
T 1iga_A 127 SPKVFPL-SL-CSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKS 204 (475)
T ss_pred CCeEEec-Cc-cccCCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCce
Confidence 5666654 22 223799999999999985 55 4 9999996521 123
Q ss_pred EEEEeeeec-----Ccee--ec------------------CCcEEecCCCCceEeecCCcEEEEeeeccCCC---CeEEE
Q psy15206 57 LHLAIPYTS-----PEAQ--VD------------------TPPVILNNSPQLSVAKEGQSVQLECHAEGHPI---PTISW 108 (232)
Q Consensus 57 ~~~~~~~~~-----~~l~--v~------------------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~~~W 108 (232)
|.|...... ..+. |. .+|.+....+....+.+|+.+.|.|.+.|.++ +.+.|
T Consensus 205 Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W 284 (475)
T 1iga_A 205 VTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW 284 (475)
T ss_pred EEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE
Confidence 444432221 1111 10 12322222232233568999999999988644 58999
Q ss_pred EeCCeeeCCCC---------cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEE---EEeccEEEeccce-ee
Q psy15206 109 RRENNAILPNG---------QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVK---VEFAPIVTVQSTR-IG 175 (232)
Q Consensus 109 ~~~~~~~~~~~---------~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~---v~~~p~~~~~~~~-~~ 175 (232)
. +..+.... ......+.|.|.++..+|.|.|+|.+.|..+... ....+. +..+|.+...+.. ..
T Consensus 285 -~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~-~~~~v~~~~~~~~P~v~~~~~~~~~ 361 (475)
T 1iga_A 285 -T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTP-LTATLSKSGNTFRPEVHLLPPPSEE 361 (475)
T ss_pred -C-CCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCc-eEEEeecCCCCCCCeEEEECCChHH
Confidence 4 43332110 0011234699999999999999999999876532 222332 3567777665443 23
Q ss_pred eeccCeEEEEEEeecCCC--CeEEEeeCCEEecCCC---------------eEE----EEEeccccCCceEEEEecC
Q psy15206 176 QALHHDMDLDCHIEAYPH--PILYWAKDGEIVVNDE---------------YHS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 176 ~~~g~~~~l~C~~~~~p~--~~~~W~~~g~~~~~~~---------------~~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
+..|+.+.|.|.+.|+++ +.|.|+|||..+.... .|. +.+......|.|.|+|.|.
T Consensus 362 v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~ 438 (475)
T 1iga_A 362 LALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVG 438 (475)
T ss_pred hccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEE
Confidence 567899999999999744 4899999998764321 222 2233334467899999974
No 102
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.89 E-value=9.7e-23 Score=159.18 Aligned_cols=219 Identities=14% Similarity=0.203 Sum_probs=131.1
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCC-CC-CeEEEEeCcEee------------------------------eeEEE
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGH-PI-PTISWRRNFKRL------------------------------GRLHL 59 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~-p~-~~~~W~~~~~~~------------------------------~~~~~ 59 (232)
+|.+... +....+.+|++++|.|.+.+. |. +.+.|++++..+ |.|.|
T Consensus 132 ~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dG~Y~C 210 (457)
T 1hzh_H 132 GPSVFPL-APSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYIC 210 (457)
T ss_dssp CCEEEEE-CCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGTSCCEE
T ss_pred CCeEEec-CccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCCceEEE
Confidence 6766655 334457899999999999985 64 799999965211 34455
Q ss_pred Eeeeec------Cceee-----------------cCCcEEecCCCCceE-eecCCcEEEEeeeccCCCC----eEEEEeC
Q psy15206 60 AIPYTS------PEAQV-----------------DTPPVILNNSPQLSV-AKEGQSVQLECHAEGHPIP----TISWRRE 111 (232)
Q Consensus 60 ~~~~~~------~~l~v-----------------~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~~~~~~----~~~W~~~ 111 (232)
...... ..+.+ ..+|.+....+.... +.+|+.+.|.|.+.|.+++ .+.|+++
T Consensus 211 ~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~ 290 (457)
T 1hzh_H 211 NVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD 290 (457)
T ss_dssp EEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEET
T ss_pred EEEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeC
Confidence 443221 11111 113333221222222 5579999999999987543 8999999
Q ss_pred CeeeCCCCcE---EeeCCeEEECC---CCCCC---CeEEEEEeEeCCCCc-eeeEEEE--EEEeccEEEeccceeeeecc
Q psy15206 112 NNAILPNGQT---IFTGSTLQIPR---ITKED---RGAYYCVAQNGIGRG-ARRKIEV--KVEFAPIVTVQSTRIGQALH 179 (232)
Q Consensus 112 ~~~~~~~~~~---~~~~~~l~i~~---~~~~~---~g~y~C~~~~~~~~~-~~~~~~l--~v~~~p~~~~~~~~~~~~~g 179 (232)
+..+...... ...++.+.+.. +...| .|.|+|.+.|..+.. ....+.+ .+..+|.+...+.......+
T Consensus 291 ~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~ 370 (457)
T 1hzh_H 291 GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTK 370 (457)
T ss_dssp TEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGS
T ss_pred CccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCC
Confidence 9876432211 11233343332 33445 999999999764432 2222222 23567877665543322344
Q ss_pred CeEEEEEEeecCCCC--eEEEeeCCEEecC----------CCeEEE----EEeccccCCceEEEEecC
Q psy15206 180 HDMDLDCHIEAYPHP--ILYWAKDGEIVVN----------DEYHSI----SNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 180 ~~~~l~C~~~~~p~~--~~~W~~~g~~~~~----------~~~~~~----~~~~~~~~d~g~Y~C~~~ 231 (232)
..+.|.|.+.|.+++ .|.|+|||..+.. ++.+.+ .+......|.|.|+|.|.
T Consensus 371 ~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~ 438 (457)
T 1hzh_H 371 NQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVM 438 (457)
T ss_dssp SEEEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEE
T ss_pred CcEEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEE
Confidence 459999999997554 8999999987642 222322 222333367899999984
No 103
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.89 E-value=2e-24 Score=167.68 Aligned_cols=218 Identities=17% Similarity=0.239 Sum_probs=136.8
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCC-CCC-eEEEEeCcEee-----------------------------eeEEEE
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGH-PIP-TISWRRNFKRL-----------------------------GRLHLA 60 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~-p~~-~~~W~~~~~~~-----------------------------~~~~~~ 60 (232)
+|.+... ++...+.+|+.++|.|.+.+. |.+ .+.|++++... |.|.|.
T Consensus 119 ~P~i~~~-~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dg~Y~C~ 197 (434)
T 1igy_B 119 PPSVYPL-APGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCN 197 (434)
T ss_dssp CCCEEEE-CCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTSSCCEEE
T ss_pred CCeEEEc-CCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCCCcEEEE
Confidence 5666654 333446899999999999985 665 99999965421 344444
Q ss_pred eeeec----Cceee--c-------------CCcEEecCCCCce-EeecCCcEEEEeeeccCC----CCeEEEEeCCeeeC
Q psy15206 61 IPYTS----PEAQV--D-------------TPPVILNNSPQLS-VAKEGQSVQLECHAEGHP----IPTISWRRENNAIL 116 (232)
Q Consensus 61 ~~~~~----~~l~v--~-------------~~p~~~~~~~~~~-~~~~g~~~~l~C~~~~~~----~~~~~W~~~~~~~~ 116 (232)
..... ....+ . .+..... .+... .+.+|+.+.|.|.+.|.+ .+.+.|++++..+.
T Consensus 198 a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~-~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~ 276 (434)
T 1igy_B 198 VAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIF-PPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVH 276 (434)
T ss_dssp EECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEE-CCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBC
T ss_pred EEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEe-CCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccC
Confidence 43221 11111 1 0222222 22211 167899999999999874 34799999987653
Q ss_pred CCCcE---------EeeCCeEEECCCCCCCCeEEEEEeEeCCCCc-eeeEEEE--EEEeccEEEeccceeeeeccCeEEE
Q psy15206 117 PNGQT---------IFTGSTLQIPRITKEDRGAYYCVAQNGIGRG-ARRKIEV--KVEFAPIVTVQSTRIGQALHHDMDL 184 (232)
Q Consensus 117 ~~~~~---------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l 184 (232)
..... ....+.|.|.++..+|.|.|+|.+.|..+.. ....+.+ .+..+|.+...+.......|+.+.|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L 356 (434)
T 1igy_B 277 TAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSL 356 (434)
T ss_dssp CCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEE
T ss_pred CcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEE
Confidence 22110 1123468999999999999999999876642 1222222 3445777665554333446778999
Q ss_pred EEEeecCCCC--eEEEeeCCEEecC----------CCeEE----EEEeccccCCceEEEEecC
Q psy15206 185 DCHIEAYPHP--ILYWAKDGEIVVN----------DEYHS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 185 ~C~~~~~p~~--~~~W~~~g~~~~~----------~~~~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|.+.|.+++ .|.|+|+|..+.. ++.+. +.+......|.|.|+|.|.
T Consensus 357 ~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~ 419 (434)
T 1igy_B 357 TCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVL 419 (434)
T ss_dssp EEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEE
T ss_pred EEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEE
Confidence 9999985433 7999999876532 12232 2333444467999999974
No 104
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.89 E-value=5.9e-22 Score=136.77 Aligned_cols=144 Identities=12% Similarity=0.193 Sum_probs=107.3
Q ss_pred EeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCC--C-cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC-ceeeEEEEE
Q psy15206 85 VAKEGQSVQLECHAEGHPIPTISWRRENNAILPN--G-QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR-GARRKIEVK 160 (232)
Q Consensus 85 ~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~--~-~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~-~~~~~~~l~ 160 (232)
.+.+|+++.|.|.+.+ +.+.+.|++++..+... . ........|.|.+++.+|+|.|+|.+.+..+. ..+..+.+.
T Consensus 14 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~ 92 (188)
T 1oll_A 14 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLV 92 (188)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEE
T ss_pred cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEE
Confidence 6789999999999865 34679999998765311 0 01122457999999999999999999875432 234556677
Q ss_pred EEe---ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEec-----CCCeEEEEEeccccCCceEEEEecC
Q psy15206 161 VEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVV-----NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 161 v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~-----~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
|.. +|.+...+ ...+..|++++|.|.+.+. .+.+.|+|+|..+. ......|.+.++..+|+|.|+|.|.
T Consensus 93 V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 169 (188)
T 1oll_A 93 VTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGS 169 (188)
T ss_dssp EESCSCCCEEEEES-CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCEEEEEECSSEEEEEEEECCGGGCEEEEEECE
T ss_pred ecccCCCCeEEECC-CCccccCCEEEEEEEcCCC-CCEEEEEECCccccccccCCCceeEEEECCCCcCCCcEEEEEEE
Confidence 763 56666555 3467899999999998764 56899999986543 3455678888899999999999974
No 105
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.88 E-value=6.8e-22 Score=139.06 Aligned_cols=151 Identities=20% Similarity=0.304 Sum_probs=110.3
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCCe--ee------------CCCCcEEee----CCeEEECCCCCCCCeEEE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRRENN--AI------------LPNGQTIFT----GSTLQIPRITKEDRGAYY 142 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~~------------~~~~~~~~~----~~~l~i~~~~~~~~g~y~ 142 (232)
+....+.+|+.+.|.|.+.+.+.+.+.|++++. .+ ....++... ...|.|.++..+|.|.|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYF 87 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEE
Confidence 455678899999999999998888899998532 11 001222221 237999999999999999
Q ss_pred EEeEeCCCCceeeEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeec-CCCC-eEEEeeCCEEecCC---------
Q psy15206 143 CVAQNGIGRGARRKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEA-YPHP-ILYWAKDGEIVVND--------- 208 (232)
Q Consensus 143 C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~g~~~~~~--------- 208 (232)
|.+.+..+........+.|.. +|.+...+.......|+.+.|.|.+.| .|.+ .+.|+|+|..+...
T Consensus 88 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 167 (213)
T 3d9a_L 88 CQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQD 167 (213)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCC
T ss_pred EeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCcc
Confidence 999987654333334566654 677766554444457999999999987 5655 79999999877543
Q ss_pred ---CeE----EEEEeccccCCceEEEEecC
Q psy15206 209 ---EYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ---~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+ .|.+.++...|+|.|+|.|.
T Consensus 168 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 197 (213)
T 3d9a_L 168 SKDSTYSMSSTLTLTKDEYERHNSYTCEAT 197 (213)
T ss_dssp TTTCCEEEEEEEEEEHHHHHHCCEEEEEEE
T ss_pred CCCCCEEEEEEEEEeccccCCCCEEEEEEE
Confidence 122 77778888899999999984
No 106
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.88 E-value=1.1e-21 Score=133.96 Aligned_cols=141 Identities=14% Similarity=0.200 Sum_probs=103.5
Q ss_pred eEeecCCcEEEEeeecc--CCCCeEEEEeCCeeeC----------CCCcEEe-eCCeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 84 SVAKEGQSVQLECHAEG--HPIPTISWRRENNAIL----------PNGQTIF-TGSTLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~--~~~~~~~W~~~~~~~~----------~~~~~~~-~~~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
+...+|+++.|.|...+ .+.+.+.|++++..+. ...+... .+++|.|.++..+|+|.|.|.+.+..+
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g 85 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNG 85 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTC
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCC
Confidence 45678999999995433 4556899999986542 1223322 456799999999999999999999877
Q ss_pred Cc-eeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeEEEEEeccccCCceEEEEe
Q psy15206 151 RG-ARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYHSISNFGTSEGTTGSLQCK 229 (232)
Q Consensus 151 ~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~d~g~Y~C~ 229 (232)
.. ....+.|.|..++.. ......+..+.|.|.+.|.|.|.+.|+++|..+....+..+. .+...|+|.|+|.
T Consensus 86 ~~~~~~~~~l~V~~~~~~-----p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~~i~--~~~~~d~G~Y~C~ 158 (176)
T 1hng_A 86 TRILNKALDLRILEMVSK-----PMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMS--YQWTNLRAPFKCK 158 (176)
T ss_dssp CEEEEEEEEEEEECCCCC-----CEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEE--EECSCCSSCEEEE
T ss_pred CEEEEEEEEEEEeCCCCC-----CEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCcEEEE--EEEccCCeEEEEE
Confidence 63 355667777653210 011123446899999999999999999999988766665555 4567999999999
Q ss_pred cC
Q psy15206 230 VP 231 (232)
Q Consensus 230 ~~ 231 (232)
|.
T Consensus 159 a~ 160 (176)
T 1hng_A 159 AV 160 (176)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 107
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.88 E-value=1.6e-21 Score=136.07 Aligned_cols=149 Identities=18% Similarity=0.308 Sum_probs=106.0
Q ss_pred CCceEeecCCcEEEEeeeccCCC-----CeEEEEeCCee-eCCCCcEEee-------CCeEEECCCCCCCCeEEEEEeEe
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPI-----PTISWRRENNA-ILPNGQTIFT-------GSTLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~-----~~~~W~~~~~~-~~~~~~~~~~-------~~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
+....+.+|+.+.|.|.+.+.+. +.+.|++.+.. .....+.... ..+|.|.+++.+|.|.|.|.+.+
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 88 (202)
T 3bp6_B 9 KEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVIC 88 (202)
T ss_dssp CSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEe
Confidence 34567789999999999988775 78999994333 2222232221 25799999999999999999999
Q ss_pred CCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEec------CCC-eEEEEEecccc
Q psy15206 148 GIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVV------NDE-YHSISNFGTSE 220 (232)
Q Consensus 148 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~------~~~-~~~~~~~~~~~ 220 (232)
..+. ....+.|.|..++..... .......|+.+.|.|.+.|.|.|.+.|++++..+. ..+ ...+.+..+..
T Consensus 89 ~~~~-~~~~~~l~V~~~~~~p~~-~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~~ 166 (202)
T 3bp6_B 89 GAAW-DYKYLTVKVKASYMRIDT-RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKP 166 (202)
T ss_dssp TTEE-EEEEEEEEEEBCCCCEEE-EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEECC
T ss_pred CCCc-ceEEEEEEecCCCCcccE-EEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEEEc
Confidence 7765 466777777765321110 01234579999999999999999999999875432 222 24455667778
Q ss_pred CCceEEEEecC
Q psy15206 221 GTTGSLQCKVP 231 (232)
Q Consensus 221 ~d~g~Y~C~~~ 231 (232)
.|.|.|+|.|.
T Consensus 167 ~d~G~Y~C~a~ 177 (202)
T 3bp6_B 167 QPSRNFSCMFW 177 (202)
T ss_dssp CTTCCEEEEEE
T ss_pred CCCCEEEEEEE
Confidence 99999999874
No 108
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.88 E-value=9.3e-22 Score=137.26 Aligned_cols=144 Identities=21% Similarity=0.319 Sum_probs=104.6
Q ss_pred EeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe--eCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEE
Q psy15206 85 VAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF--TGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVE 162 (232)
Q Consensus 85 ~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 162 (232)
.+.+|+.+.|.|.+.|.|.+.+.|++...... ...... ....|.|.++..+|.|.|.|.+.+..+. ....+.|.|.
T Consensus 12 ~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~-~~~~~~l~V~ 89 (202)
T 1vca_A 12 LAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL-NGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRK-LEKGIQVEIY 89 (202)
T ss_dssp EEETTSCEEEEEEEESCSSCEEEEEETTCCCC-SSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEE-EEEEEEEEEE
T ss_pred EEcCCCcEEEEEeecCCCCCeEEEECCCCCCc-cceEEEcCCccEEEECcCCHHHCEEEEEEEEECCce-EeeEEEEEEE
Confidence 44589999999999999999999998432211 111111 2346999999999999999999998665 5667888888
Q ss_pred eccE-EEeccceeeeeccCeEEEEEEeecCCC---CeEEEeeCCEEecCC-----------C--eEEEEEeccccCCceE
Q psy15206 163 FAPI-VTVQSTRIGQALHHDMDLDCHIEAYPH---PILYWAKDGEIVVND-----------E--YHSISNFGTSEGTTGS 225 (232)
Q Consensus 163 ~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~~~W~~~g~~~~~~-----------~--~~~~~~~~~~~~d~g~ 225 (232)
.+|. +.+.+. ..+..|+.++|.|.+.+.++ +.|.|+|+|..+... . ...+.+......|.|+
T Consensus 90 ~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ 168 (202)
T 1vca_A 90 SFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKV 168 (202)
T ss_dssp BCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCE
T ss_pred eCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCe
Confidence 7664 233333 56789999999999988643 369999999876421 1 1233455566678899
Q ss_pred EEEecC
Q psy15206 226 LQCKVP 231 (232)
Q Consensus 226 Y~C~~~ 231 (232)
|+|+|.
T Consensus 169 ytC~A~ 174 (202)
T 1vca_A 169 LVCRAK 174 (202)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999984
No 109
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.88 E-value=1.7e-21 Score=137.02 Aligned_cols=149 Identities=20% Similarity=0.316 Sum_probs=111.3
Q ss_pred ceEeecCCcEEEEeeeccCCCCeEEEEeC--CeeeC------------CCCcEEe----eCCeEEECCCCCCCCeEEEEE
Q psy15206 83 LSVAKEGQSVQLECHAEGHPIPTISWRRE--NNAIL------------PNGQTIF----TGSTLQIPRITKEDRGAYYCV 144 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~~~~~~~W~~~--~~~~~------------~~~~~~~----~~~~l~i~~~~~~~~g~y~C~ 144 (232)
...+.+|+.+.|.|.+.+.+.+.+.|++. +.... ...++.. ...+|.|.+++.+|.|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 56788999999999999888899999983 21110 1122221 234699999999999999999
Q ss_pred eEeCCC--CceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecC-CC-CeEEEeeCCEEecCC--------
Q psy15206 145 AQNGIG--RGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAY-PH-PILYWAKDGEIVVND-------- 208 (232)
Q Consensus 145 ~~~~~~--~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~g~~~~~~-------- 208 (232)
+.+..+ ........+.|. .+|.+...+....+..|+.++|.|.+.|. |+ +.+.|+|+|..+..+
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 168 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSK 168 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEE
T ss_pred eccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCc
Confidence 999776 234456677777 67888776665556689999999999886 33 389999999987532
Q ss_pred --CeEE----EEEeccccCCceEEEEecC
Q psy15206 209 --EYHS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 --~~~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+. +.+..+..+|+|.|+|.|.
T Consensus 169 ~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 197 (213)
T 3mj8_L 169 SDSKYMATSYLTMTADAWKSRNTFICKVT 197 (213)
T ss_dssp ETTEEEEEEEEEEESHHHHSCSCEEEEEE
T ss_pred cCCcEEEEEEEEEeHHHcCCCCEEEEEEE
Confidence 2333 5566777789999999984
No 110
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.88 E-value=1.5e-21 Score=137.26 Aligned_cols=151 Identities=19% Similarity=0.310 Sum_probs=109.8
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eee---C---------CCCcEEee----CCeEEECCCCCCCCeEEE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAI---L---------PNGQTIFT----GSTLQIPRITKEDRGAYY 142 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~---~---------~~~~~~~~----~~~l~i~~~~~~~~g~y~ 142 (232)
+....+.+|+.+.|.|.+.+.+.+.+.|+++. ..+ . ...++... ..+|.|.+++.+|.|.|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYY 87 (213)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred CCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEE
Confidence 45577889999999999999888899999853 111 0 01222221 237999999999999999
Q ss_pred EEeEeCCCC--ceeeEEEEEE---EeccEEEeccceeeeeccCeEEEEEEeec-CCCCeEEEeeCCEEecC---------
Q psy15206 143 CVAQNGIGR--GARRKIEVKV---EFAPIVTVQSTRIGQALHHDMDLDCHIEA-YPHPILYWAKDGEIVVN--------- 207 (232)
Q Consensus 143 C~~~~~~~~--~~~~~~~l~v---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~g~~~~~--------- 207 (232)
|.+.+..+. .......+.| ..+|.+...+....+..|+.++|.|.+.+ .|.+.+.|+|+|..+..
T Consensus 88 C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~ 167 (213)
T 3nl4_L 88 CQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQ 167 (213)
T ss_dssp EEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCC
T ss_pred EecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcc
Confidence 999986543 2333445555 45667766555445667999999999988 89889999999987653
Q ss_pred ---CCeE----EEEEeccccCCceEEEEecC
Q psy15206 208 ---DEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 208 ---~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+..+ .|.+..+...|+|.|+|.|.
T Consensus 168 ~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 168 NSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 2233 35667777799999999974
No 111
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.88 E-value=2e-21 Score=134.35 Aligned_cols=155 Identities=28% Similarity=0.473 Sum_probs=120.5
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee--------------------------eeEEEEee
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL--------------------------GRLHLAIP 62 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~--------------------------~~~~~~~~ 62 (232)
+..+|.|... +.++.+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|...
T Consensus 4 ~~~~P~i~~~-~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 4 LPKAPVITTP-LETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp CCEEEEESSC-CCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEE
T ss_pred cCCCceeecC-ccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEE
Confidence 4568888877 78888999999999999999888999999954332 46666653
Q ss_pred ee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEE-eeCCeEEECCCC
Q psy15206 63 YT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTI-FTGSTLQIPRIT 134 (232)
Q Consensus 63 ~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~-~~~~~l~i~~~~ 134 (232)
.. ...|.+..+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+....+.. ...+.|.|.++.
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~ 161 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPKITR-PPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQ 161 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEEE-CCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCC
T ss_pred cCCCceeEeEEEEEEEeCCcccc-CCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCC
Confidence 21 34566666666554 4556678899999999999999989999999998876554443 345689999999
Q ss_pred CCCCeEEEEEeEeCCCCceeeEEEEEEEecc
Q psy15206 135 KEDRGAYYCVAQNGIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 165 (232)
.+|.|.|+|.+.|..|......+.+.|..+|
T Consensus 162 ~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 162 KEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred hhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 9999999999999887755566777777654
No 112
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.88 E-value=9.3e-22 Score=153.64 Aligned_cols=209 Identities=19% Similarity=0.259 Sum_probs=129.2
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCc--Ee--------------------e---------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNF--KR--------------------L--------------------- 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~--~~--------------------~--------------------- 54 (232)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. .. .
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (457)
T 1hzh_H 7 SGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL 86 (457)
T ss_dssp CCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCC
Confidence 5678899999999999998865 6789999831 00 0
Q ss_pred -----eeEEEEeeee------------------cCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CC-Ce
Q psy15206 55 -----GRLHLAIPYT------------------SPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PI-PT 105 (232)
Q Consensus 55 -----~~~~~~~~~~------------------~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~ 105 (232)
|.|.|..... ...|.|.. +|.+....+ ...+.+|+.+.|.|.+.+. |. +.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~ 165 (457)
T 1hzh_H 87 RSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVT 165 (457)
T ss_dssp CGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECC-CSCCCTTCCEEEEEEEESBBSCCCE
T ss_pred CcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCc-cccccCCCcEEEEEEEeEEeCCCeE
Confidence 2344433211 11344443 333322111 2234689999999999886 54 78
Q ss_pred EEEEeCCeeeCC--------CCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEE----------------
Q psy15206 106 ISWRRENNAILP--------NGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKV---------------- 161 (232)
Q Consensus 106 ~~W~~~~~~~~~--------~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v---------------- 161 (232)
+.|++++..+.. ........+.|.|.++..+| |.|+|.+.+..+. ......+.+
T Consensus 166 v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~ 243 (457)
T 1hzh_H 166 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN-TKVDKKAEPKSCDKTHTCPPCPAPE 243 (457)
T ss_dssp EEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGT-EEEEEECCCCCSCSSCSCCSCCCCC
T ss_pred EEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCC-cceeEEecccCCCcccccCCCCCcc
Confidence 999998854311 01111112368999999989 9999999996554 222222221
Q ss_pred -EeccEEEec-cceee-eeccCeEEEEEEeecCCCC----eEEEeeCCEEecCC----------CeEEEEEe----cccc
Q psy15206 162 -EFAPIVTVQ-STRIG-QALHHDMDLDCHIEAYPHP----ILYWAKDGEIVVND----------EYHSISNF----GTSE 220 (232)
Q Consensus 162 -~~~p~~~~~-~~~~~-~~~g~~~~l~C~~~~~p~~----~~~W~~~g~~~~~~----------~~~~~~~~----~~~~ 220 (232)
..+|.+... +.... +..|+.+.|.|.+.|.|++ .+.|+|+|..+... +.+.+... ....
T Consensus 244 ~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~ 323 (457)
T 1hzh_H 244 LLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDW 323 (457)
T ss_dssp CSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHH
T ss_pred ccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHc
Confidence 124555333 32222 5679999999999998653 89999999776422 22333221 2222
Q ss_pred CCceEEEEecC
Q psy15206 221 GTTGSLQCKVP 231 (232)
Q Consensus 221 ~d~g~Y~C~~~ 231 (232)
.|+|.|+|.|.
T Consensus 324 ~d~G~Y~C~a~ 334 (457)
T 1hzh_H 324 LNGKEYKCKVS 334 (457)
T ss_dssp HHTCCEEEEEE
T ss_pred cCCCcEEEEEe
Confidence 44999999974
No 113
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.88 E-value=9.7e-22 Score=141.99 Aligned_cols=190 Identities=19% Similarity=0.302 Sum_probs=108.4
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEeCcEeeeeEEEEeeeecCceeecCCcEEecCCCCceEeecCCcEEEEeeec
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRLGRLHLAIPYTSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAE 99 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 99 (232)
.....+..++...+.|.+.+..... ..+.+..++.+.. .+....+.+|+.+.|.|.+.
T Consensus 6 ~~~~~v~~~dsg~Y~C~a~g~~~~~---------------------~~~~~~~~~~~~~-~p~~~~v~~G~~v~L~C~~~ 63 (254)
T 2c1o_A 6 SGAELVRPGTSVKLSCKASGYSFTN---------------------YWMNWLRELVMTQ-SPLTLSVTIGQPASISCKSS 63 (254)
T ss_dssp -----------------------------------------------------CCCEEE-ECSEEEECTTSCEEEEEEES
T ss_pred CCcceecCCccEEEEEcCchhhhhh---------------------hhhheeeceeEEe-CCceEEecCCCcEEEEeecc
Confidence 3455688889999999988422111 1111111333322 35567888999999999998
Q ss_pred cCC-----CCeEEEEeCC--eee------------CCCCcEEee----CCeEEECCCCCCCCeEEEEEeEeCCCCceeeE
Q psy15206 100 GHP-----IPTISWRREN--NAI------------LPNGQTIFT----GSTLQIPRITKEDRGAYYCVAQNGIGRGARRK 156 (232)
Q Consensus 100 ~~~-----~~~~~W~~~~--~~~------------~~~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~ 156 (232)
+.+ .+.+.|++++ ..+ ....++... ..+|.|.+++.+|.|.|.|.+.+..+......
T Consensus 64 ~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~ 143 (254)
T 2c1o_A 64 QSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAG 143 (254)
T ss_dssp SCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCC
T ss_pred CcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCC
Confidence 877 3789999743 211 011233221 22799999999999999999998654322223
Q ss_pred EEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecC-CC-CeEEEeeCCEEecCC------------C----eEEEEE
Q psy15206 157 IEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAY-PH-PILYWAKDGEIVVND------------E----YHSISN 215 (232)
Q Consensus 157 ~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~g~~~~~~------------~----~~~~~~ 215 (232)
..+.|.. +|.+...+.......|+.+.|.|.+.|. |. +.+.|+|+|..+... . ...|.+
T Consensus 144 ~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i 223 (254)
T 2c1o_A 144 TKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL 223 (254)
T ss_dssp EEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEE
T ss_pred EEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEe
Confidence 3455543 6777665444344468899999999884 44 359999999876543 1 235667
Q ss_pred eccccCCceEEEEecC
Q psy15206 216 FGTSEGTTGSLQCKVP 231 (232)
Q Consensus 216 ~~~~~~d~g~Y~C~~~ 231 (232)
..+...|+|.|+|.|.
T Consensus 224 ~~~~~~d~G~Y~C~a~ 239 (254)
T 2c1o_A 224 TKDEYERHNSYTCEAT 239 (254)
T ss_dssp EHHHHHTCCEEEEEEE
T ss_pred ccccccCCCeEEEEEE
Confidence 7777899999999974
No 114
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.88 E-value=1.9e-21 Score=136.55 Aligned_cols=161 Identities=27% Similarity=0.493 Sum_probs=118.3
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe----------------------------------ee
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR----------------------------------LG 55 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~----------------------------------~~ 55 (232)
..||.|... +.++.+.+|++++|.|.+.+.|.+.+.|++++.. .|
T Consensus 7 ~~pp~i~~~-p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 85 (212)
T 2v9r_A 7 DFPPRIVEH-PSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (212)
T ss_dssp CEEEEEEEC-CCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCE
T ss_pred cCCcceecC-CCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCe
Confidence 458889887 8889999999999999999889899999995322 24
Q ss_pred eEEEEeeee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCeeeCCC-CcEEeeCC
Q psy15206 56 RLHLAIPYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENNAILPN-GQTIFTGS 126 (232)
Q Consensus 56 ~~~~~~~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~-~~~~~~~~ 126 (232)
.|.|..... ...|.|...+......+....+..|+.+.|.|.+ .+.|.+.+.|++++..+... .+....++
T Consensus 86 ~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~ 165 (212)
T 2v9r_A 86 VYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGG 165 (212)
T ss_dssp EEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETT
T ss_pred EEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCC
Confidence 677766321 3445554332222234555678899999999998 88899999999999887643 34555678
Q ss_pred eEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEecc
Q psy15206 127 TLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQS 171 (232)
Q Consensus 127 ~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~ 171 (232)
.|.|.++..+|.|.|+|.+.|..|...+..+.|.|..+|.+...|
T Consensus 166 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~~P 210 (212)
T 2v9r_A 166 KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAA 210 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--------
T ss_pred eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhhhc
Confidence 999999999999999999999887644455888898888876554
No 115
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.88 E-value=3.6e-21 Score=130.60 Aligned_cols=142 Identities=18% Similarity=0.251 Sum_probs=110.2
Q ss_pred CCCceEeecCCcEEEEeeeccCC-CCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHP-IPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
.+....+.+|+.+.|.|.+.+.+ .+.+.|++++..+... ...+.+.++...|.|.|+|.+.+... ...+.
T Consensus 10 ~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~------~~~~~~~~~~~~d~G~Y~C~~~~~~~---s~~~~ 80 (170)
T 3ry4_A 10 EPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH------TQPSYRFKANNNDSGEYTCQTGQTSL---SDPVH 80 (170)
T ss_dssp ESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC------CSSEEEEECCGGGCEEEEEEETTSBC---CCCEE
T ss_pred CCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC------ccceEEEecccccCeEEEEEEeCCCc---eEeEE
Confidence 34445678999999999998876 5689999999887543 33567789999999999999986433 34567
Q ss_pred EEEEeccEEEeccceeeeeccCeEEEEEEee-cCCCCeEEEeeCCEEec-CCCeEEEEEeccccCCceEEEEecC
Q psy15206 159 VKVEFAPIVTVQSTRIGQALHHDMDLDCHIE-AYPHPILYWAKDGEIVV-NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 159 l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~g~~~~-~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|..++.+...+ ...+..|+.+.|.|.+. +.|.+.+.|+++|..+. ......+.+.++..+|+|.|+|.|.
T Consensus 81 l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 154 (170)
T 3ry4_A 81 LTVLFEWLVLQTP-HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDYHCTGN 154 (170)
T ss_dssp EEEECCSEEEECS-CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEESSCCEEEESSCCGGGCEEEEEEEE
T ss_pred EEEECCceEecCC-CceeecCCeEEEEEECCCCCCCceEEEEECCeEccccCCCCeEEEEeccccCCEEEEEEEE
Confidence 7777776554443 45677899999999994 55668999999998765 2334567788889999999999874
No 116
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.87 E-value=2.3e-21 Score=136.12 Aligned_cols=151 Identities=15% Similarity=0.260 Sum_probs=108.3
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eee------------CCCCcEEee----CCeEEECCCCCCCCeEEE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAI------------LPNGQTIFT----GSTLQIPRITKEDRGAYY 142 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~------------~~~~~~~~~----~~~l~i~~~~~~~~g~y~ 142 (232)
+....+.+|+.+.|.|.+.+.+.+.+.|+++. ..+ ....++... ...|.|.+++.+|.|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 55677889999999999998888889999853 211 011232221 237999999999999999
Q ss_pred EEeEeCCCCceeeEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEEecCC---------
Q psy15206 143 CVAQNGIGRGARRKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEIVVND--------- 208 (232)
Q Consensus 143 C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~~~~~--------- 208 (232)
|.+.+..+........+.|.. +|.+...+.......|+.+.|.|.+.|. |.+ .+.|+|+|..+...
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 166 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQD 166 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCcc
Confidence 999986554233334556654 5777665444344579999999999874 444 89999999876533
Q ss_pred ---CeE----EEEEeccccCCceEEEEecC
Q psy15206 209 ---EYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ---~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.+ .|.+..+...|+|.|+|.|.
T Consensus 167 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 196 (210)
T 1lk3_L 167 SKDSTYSMSSTLSLTKADYESHNLYTCEVV 196 (210)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCCCCEEEEEEEEEChHHhccCCcEEEEEE
Confidence 122 56777778899999999984
No 117
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.87 E-value=7e-22 Score=136.14 Aligned_cols=137 Identities=18% Similarity=0.337 Sum_probs=99.1
Q ss_pred eEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECC-CCCCCCeEEEEEeEeCCCCceeeEEEEEEE
Q psy15206 84 SVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPR-ITKEDRGAYYCVAQNGIGRGARRKIEVKVE 162 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~-~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 162 (232)
.....|+.+.|.|.+.+ + +.+.|+++|..+... .+.+|.|.+ +..+|+|.|+|.+.|..|. ....+.+.|.
T Consensus 9 ~v~~~G~~v~L~C~~~~-~-~~i~W~k~g~~l~~~-----~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~-~~~~~~~~v~ 80 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-D-ENLKWEKNGQELPQK-----HDKHLVLQDFSEVEDSGYYVCYTPASNKN-TYLYLKARVG 80 (186)
T ss_dssp EEEEETTEEEEECSSCC-C-TTCEEEETTEEECSC-----CCSEEEEESCCTTTSCEEEEEECSSCCCC-CCEEECCCCC
T ss_pred EEEeCCcEEEEEEeCCC-C-CceEEEECCEECCCC-----CCCEEEECCCCccccCEEEEEEEEeCCCc-EEEEEEEEEe
Confidence 44567999999999987 3 349999999887653 245799999 9999999999999987765 3233333322
Q ss_pred e--ccEE----------------E--ec--cce---eeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC--CCeEEEEE
Q psy15206 163 F--APIV----------------T--VQ--STR---IGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN--DEYHSISN 215 (232)
Q Consensus 163 ~--~p~~----------------~--~~--~~~---~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~--~~~~~~~~ 215 (232)
. ++.. . .. ... ..+..|+.+.|.|.+ |.|.|.|+|||..+.. .....|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~~~~~L~i 157 (186)
T 1jbj_A 81 SADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNATKNTWNL 157 (186)
T ss_dssp SCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSCCSSCCEE
T ss_pred cccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCCCcceEEE
Confidence 1 1110 0 00 000 123489999999998 7889999999998862 23455666
Q ss_pred eccccCCceEEEEecC
Q psy15206 216 FGTSEGTTGSLQCKVP 231 (232)
Q Consensus 216 ~~~~~~d~g~Y~C~~~ 231 (232)
.++...|+|.|+|.|.
T Consensus 158 ~~v~~~D~G~Y~C~a~ 173 (186)
T 1jbj_A 158 GNNAKDPRGTYQCQGA 173 (186)
T ss_dssp EETTSCCEEEEEEEES
T ss_pred CCCCcCcCEEEEEEEE
Confidence 7888999999999985
No 118
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.87 E-value=3.8e-21 Score=136.70 Aligned_cols=149 Identities=22% Similarity=0.475 Sum_probs=115.1
Q ss_pred CceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCc-----EEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeE
Q psy15206 82 QLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQ-----TIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRK 156 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~-----~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~ 156 (232)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... .......|.|.++...|.|.|+|.+.+..+. ....
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~-~~~~ 105 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGS-INHT 105 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCc-cccc
Confidence 567788999999999999988889999999988743321 2223457999999999999999999998765 4556
Q ss_pred EEEEEEec----cEEEe-ccceeeeeccCeEEEEEEeecCCCCeEEEee----CCEEecCCC----------------eE
Q psy15206 157 IEVKVEFA----PIVTV-QSTRIGQALHHDMDLDCHIEAYPHPILYWAK----DGEIVVNDE----------------YH 211 (232)
Q Consensus 157 ~~l~v~~~----p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~----~g~~~~~~~----------------~~ 211 (232)
..+.|... |.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ +|..+..+. ..
T Consensus 106 ~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (231)
T 3ojm_B 106 YHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAE 185 (231)
T ss_dssp EEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTT
T ss_pred EEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCcc
Confidence 67777642 33322 2456678889999999999999999999999 666543221 23
Q ss_pred EEEEeccccCCceEEEEecC
Q psy15206 212 SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 212 ~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|.+.++...|+|.|+|.|.
T Consensus 186 ~L~i~~~~~~d~G~Y~C~a~ 205 (231)
T 3ojm_B 186 VLALFNVTEADAGEYICKVS 205 (231)
T ss_dssp EEEECSCCGGGCEEEEEEEE
T ss_pred EEEEecCCHHHCeEEEEEEE
Confidence 47777888899999999974
No 119
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.87 E-value=6e-21 Score=131.18 Aligned_cols=141 Identities=15% Similarity=0.260 Sum_probs=108.6
Q ss_pred eEeecCCcEEEEeeeccCCCC--eEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEE
Q psy15206 84 SVAKEGQSVQLECHAEGHPIP--TISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKV 161 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~~~--~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 161 (232)
..+.+|+.+.|.|.+.+.+.+ .+.|++++..+...... .....|.|. ..+|.|.|+|.+.+. ....+.+.|
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-~~~~~l~i~--~~~d~G~Y~C~~~n~----~~~~~~l~V 80 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-GQKTEFKVD--SDDQWGEYSCVFLPE----PMGTANIQL 80 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-CSEEEEEEC--GGGCCEEEEEEEEST----TSCEEEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-CCcEEEEEe--chhhCeEEEEEEECC----cCcEEEEEE
Confidence 456789999999999887766 89999999877543221 112245555 688999999999972 235668888
Q ss_pred EeccEEEeccceeeeeccCeEEEEEEeecCC-CCeEEEee---CCEE-ecCC--C---------eEEEEEeccc-cCCce
Q psy15206 162 EFAPIVTVQSTRIGQALHHDMDLDCHIEAYP-HPILYWAK---DGEI-VVND--E---------YHSISNFGTS-EGTTG 224 (232)
Q Consensus 162 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~W~~---~g~~-~~~~--~---------~~~~~~~~~~-~~d~g 224 (232)
..+|.+...+....+..|+.+.|.|.+.|.| .+.+.|++ ++.. +... . ...|.+.++. ..|+|
T Consensus 81 ~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G 160 (184)
T 3b5h_A 81 HGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPG 160 (184)
T ss_dssp CCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSE
T ss_pred ecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCc
Confidence 8899888888777888999999999999999 78999999 4543 3321 2 2367777888 79999
Q ss_pred EEEEecC
Q psy15206 225 SLQCKVP 231 (232)
Q Consensus 225 ~Y~C~~~ 231 (232)
.|+|.|.
T Consensus 161 ~Y~C~a~ 167 (184)
T 3b5h_A 161 QYRCNGT 167 (184)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9999874
No 120
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.87 E-value=1.8e-20 Score=131.73 Aligned_cols=153 Identities=28% Similarity=0.511 Sum_probs=117.8
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee------------------------------eeEEE
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL------------------------------GRLHL 59 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~------------------------------~~~~~ 59 (232)
..||.|... +.+..+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|
T Consensus 4 ~~pP~~~~~-p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 4 AHPPEIIRK-PQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp -CCCEEEEC-CCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEE
T ss_pred CCCCEEEcC-CCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEE
Confidence 468999998 88899999999999999999999999999954322 34666
Q ss_pred Eeeee-------cCceeecCC-------cEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC-CCcEEee
Q psy15206 60 AIPYT-------SPEAQVDTP-------PVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP-NGQTIFT 124 (232)
Q Consensus 60 ~~~~~-------~~~l~v~~~-------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~-~~~~~~~ 124 (232)
..... .+.|.|..+ |.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. .......
T Consensus 83 ~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~ 161 (212)
T 2yd1_A 83 VAENGVGDAVSADATLTIYEGDKTPAGFPVITQ-GPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLK 161 (212)
T ss_dssp EEECSSSCEEEEEEEEEEECTTCSCTTCCEEEE-CCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEE
T ss_pred EEEeCCCCeEEeeEEEEEecccCCCCCCCeeEe-CCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEcc
Confidence 55221 445555543 44443 44556777899999999999999999999999988764 3345566
Q ss_pred CCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEec
Q psy15206 125 GSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFA 164 (232)
Q Consensus 125 ~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~ 164 (232)
++.|.|.++..+|.|.|+|.+.|..|......+.|.|...
T Consensus 162 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 162 DGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVR 201 (212)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred CCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEec
Confidence 7799999999999999999999988874444567777654
No 121
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.87 E-value=1.3e-20 Score=132.50 Aligned_cols=157 Identities=25% Similarity=0.405 Sum_probs=116.1
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee-----------------------------eeEEE
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL-----------------------------GRLHL 59 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~-----------------------------~~~~~ 59 (232)
+..+|.|... +.+..+.+|++++|.|.+.+.|.+.+.|++++..+ |.|+|
T Consensus 3 ~~~~P~~~~~-p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 3 GETPPRFTRT-PVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp -CEEEEEEEC-CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEE
T ss_pred CCCCCeEEeC-cceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEE
Confidence 4678999988 88899999999999999999899999999954321 35666
Q ss_pred Eeeee------cCceeecCC-------cEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCC---CcEEe
Q psy15206 60 AIPYT------SPEAQVDTP-------PVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPN---GQTIF 123 (232)
Q Consensus 60 ~~~~~------~~~l~v~~~-------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~---~~~~~ 123 (232)
..... .+.|.|..+ |.+.. .+....+..|+.+.|.|.+.|.|.+.+.|++++..+... .+...
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~ 160 (212)
T 2yd6_A 82 VASNNVGEISVSTRLTVLREDQIPRGFPTIDM-GPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQ 160 (212)
T ss_dssp EEEETTEEEEEEEEEEEECGGGCCTTCCEEEE-CCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEE
T ss_pred EEEcCCCcEEEEEEEEEeccCccCCCcceeec-CCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEE
Confidence 54222 445555432 33433 455567788999999999999999999999999887543 12221
Q ss_pred ----eCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEE
Q psy15206 124 ----TGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIV 167 (232)
Q Consensus 124 ----~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 167 (232)
..+.|.|.++..+|.|.|+|.+.|..|...+..+.+.+...+..
T Consensus 161 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~~~ 208 (212)
T 2yd6_A 161 LRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTKHH 208 (212)
T ss_dssp EEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred EecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecccc
Confidence 13689999999999999999999999887777788888776654
No 122
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.87 E-value=4.6e-21 Score=136.36 Aligned_cols=152 Identities=16% Similarity=0.256 Sum_probs=111.5
Q ss_pred CCCceEeecCCcEEEEeeeccCCC-CeEEEEeCCeeeC---------C----CCcE-----------EeeCCeEEECCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPI-PTISWRRENNAIL---------P----NGQT-----------IFTGSTLQIPRIT 134 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~-~~~~W~~~~~~~~---------~----~~~~-----------~~~~~~l~i~~~~ 134 (232)
.+....+.+|+.+.|.|.+.+.+. +.+.|++++.... . ..+. ...++.|.|.+++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 355667889999999999988875 7899997654311 0 0111 2223569999999
Q ss_pred CCCCeEEEEEeEeCCCCceeeEEEEEEEec---cEEEeccceeeeeccCeE-EEEEEe-ecCCCCeEEEeeCCEEecCCC
Q psy15206 135 KEDRGAYYCVAQNGIGRGARRKIEVKVEFA---PIVTVQSTRIGQALHHDM-DLDCHI-EAYPHPILYWAKDGEIVVNDE 209 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~-~l~C~~-~~~p~~~~~W~~~g~~~~~~~ 209 (232)
.+|.|.|.|.+.+.........+.+.|..+ |.+...+....+..|+.+ .|.|.+ .+.|.+.+.|+++|..+....
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~ 165 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPV 165 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCS
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcccc
Confidence 999999999999876233567778888766 445555555566788888 999999 899999999999998876544
Q ss_pred ----e------------------EEEEEeccccCCceEEEEecC
Q psy15206 210 ----Y------------------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 210 ----~------------------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+ ..+.+......|+|.|+|.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~ 209 (231)
T 2pet_A 166 EMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAH 209 (231)
T ss_dssp SCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEE
T ss_pred ccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEE
Confidence 2 224444445456999999974
No 123
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.87 E-value=2.5e-21 Score=142.42 Aligned_cols=151 Identities=20% Similarity=0.356 Sum_probs=117.7
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEe-CCeeeCCCCcEEee----CCeEEECCCCCCCCeEEEEEeEeCCCCcee
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRR-ENNAILPNGQTIFT----GSTLQIPRITKEDRGAYYCVAQNGIGRGAR 154 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~-~~~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~ 154 (232)
.+....+.+|+.+.|.|.+.+.|. .+.|++ ++..+....+.... ...|.|.++..+|.|.|+|.+.+..+....
T Consensus 10 ~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~ 88 (291)
T 2wim_A 10 SLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQE 88 (291)
T ss_dssp SCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEE
T ss_pred eccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEE
Confidence 566778889999999999988764 899999 56555444443322 237999999999999999999998777556
Q ss_pred eEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC--CCe------EEEEEeccccCCceEE
Q psy15206 155 RKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN--DEY------HSISNFGTSEGTTGSL 226 (232)
Q Consensus 155 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~--~~~------~~~~~~~~~~~d~g~Y 226 (232)
..+.+.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..+ ..+.+.++...|+|.|
T Consensus 89 ~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 168 (291)
T 2wim_A 89 ATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIY 168 (291)
T ss_dssp EEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEE
T ss_pred EEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEE
Confidence 67788888888777667777888999999999999999999999999877652 222 2466778888999999
Q ss_pred EEecC
Q psy15206 227 QCKVP 231 (232)
Q Consensus 227 ~C~~~ 231 (232)
+|.+.
T Consensus 169 ~C~~~ 173 (291)
T 2wim_A 169 RCEGR 173 (291)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99873
No 124
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.87 E-value=8.8e-21 Score=132.81 Aligned_cols=145 Identities=18% Similarity=0.293 Sum_probs=109.4
Q ss_pred eEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC-------------------CCcE-EeeCCeEEECCCCCCCCeEEEE
Q psy15206 84 SVAKEGQSVQLECHAEGHPIPTISWRRENNAILP-------------------NGQT-IFTGSTLQIPRITKEDRGAYYC 143 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~-------------------~~~~-~~~~~~l~i~~~~~~~~g~y~C 143 (232)
..+.+|+.+.|.|...+.+.+.+.|++++..... ..+. ...+++|.|.+++..|.|.|+|
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C 88 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTL 88 (208)
T ss_dssp SEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEE
T ss_pred ceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEE
Confidence 4567899999999987788889999987532110 1111 2224579999999999999999
Q ss_pred EeEeCCCCceeeEEEEEEEec---cEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe-------EEE
Q psy15206 144 VAQNGIGRGARRKIEVKVEFA---PIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY-------HSI 213 (232)
Q Consensus 144 ~~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~-------~~~ 213 (232)
.+.+..+......+.+.|..+ |.+...+.. +..|+.+.|.|.+.+.| +.+.|+++|..+....+ ..|
T Consensus 89 ~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~~~~L 165 (208)
T 3r4d_A 89 DMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQNNSIL 165 (208)
T ss_dssp EEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETTTTEE
T ss_pred EEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCCCCEE
Confidence 999875444566677777654 455544443 77899999999999876 79999999988775433 356
Q ss_pred EEeccccCCceEEEEecC
Q psy15206 214 SNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 214 ~~~~~~~~d~g~Y~C~~~ 231 (232)
.+.++...|+|.|+|.|.
T Consensus 166 ~i~~v~~~d~G~Y~C~a~ 183 (208)
T 3r4d_A 166 RIDPIKREDAGEYQCEIS 183 (208)
T ss_dssp EESSCCGGGCEEEEEEEE
T ss_pred EEeccCHHhCeEEEEEEe
Confidence 667788899999999974
No 125
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.87 E-value=3.5e-21 Score=135.29 Aligned_cols=149 Identities=21% Similarity=0.306 Sum_probs=112.0
Q ss_pred CceEeecCCcEEEEeeeccCC----CCeEEEEeC----------------CeeeCC-----CCcEEe-------eCCeEE
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP----IPTISWRRE----------------NNAILP-----NGQTIF-------TGSTLQ 129 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~----~~~~~W~~~----------------~~~~~~-----~~~~~~-------~~~~l~ 129 (232)
....+.+|+.+.|.|.+.+.+ .+.+.|++. +..... ..+... ...+|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 445677899999999998766 458999983 333221 222222 235799
Q ss_pred ECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEe-ecCCCCeEEEeeCC--EEec
Q psy15206 130 IPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHI-EAYPHPILYWAKDG--EIVV 206 (232)
Q Consensus 130 i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~g--~~~~ 206 (232)
|.+++.+|.|.|.|.+.+..+. ....+.|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++ ..+.
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~ 166 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGV-ANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMP 166 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCC
T ss_pred EccCChhhCeEEEEEEEeCCCc-cccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccC
Confidence 9999999999999999987665 567788888887765544444457789999999999 89999999999954 3332
Q ss_pred -----CCCeEEEEEeccccCCceEEEEecC
Q psy15206 207 -----NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 -----~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
....-.|.+.++...|+|.|+|.|.
T Consensus 167 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 196 (214)
T 3jz7_A 167 TPWLAEMTSPVISVKNASSEYSGTYSCTVQ 196 (214)
T ss_dssp GGGGGGTTSSEEEECSCCGGGCEEEEEEEE
T ss_pred ccceeccCCCEEEEecCCHHHCEEEEEEEE
Confidence 1123478888899999999999974
No 126
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.87 E-value=3.5e-21 Score=134.27 Aligned_cols=143 Identities=14% Similarity=0.188 Sum_probs=103.5
Q ss_pred eEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCc---E--EeeCCeEEECCCCCCCCeEEEEEeEeCC----CCcee
Q psy15206 84 SVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQ---T--IFTGSTLQIPRITKEDRGAYYCVAQNGI----GRGAR 154 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~---~--~~~~~~l~i~~~~~~~~g~y~C~~~~~~----~~~~~ 154 (232)
..+.+|+++.|.|.+.+ +.+.+.|+++|..+..... . ......|.|.+++.+|+|.|+|.+.+.. ....+
T Consensus 17 ~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s 95 (201)
T 1nkr_A 17 PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPS 95 (201)
T ss_dssp SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCC
T ss_pred CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCCC
Confidence 56779999999999964 6678999999875421110 0 1124579999999999999999998642 12234
Q ss_pred eEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC--------C--CeEEEEEeccccC
Q psy15206 155 RKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN--------D--EYHSISNFGTSEG 221 (232)
Q Consensus 155 ~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~--------~--~~~~~~~~~~~~~ 221 (232)
..+.+.|.. +|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+.. . ....|.+.+++
T Consensus 96 ~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~-- 171 (201)
T 1nkr_A 96 DPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT-- 171 (201)
T ss_dssp CCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--
T ss_pred CCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--
Confidence 556666654 466666555 46789999999999976 5678999999865432 1 14456677776
Q ss_pred CceEEEEecC
Q psy15206 222 TTGSLQCKVP 231 (232)
Q Consensus 222 d~g~Y~C~~~ 231 (232)
|+|.|+|.|.
T Consensus 172 d~G~Y~C~a~ 181 (201)
T 1nkr_A 172 HGGTYRCFGS 181 (201)
T ss_dssp SCEEEEEEEE
T ss_pred CCeeEEEEEE
Confidence 9999999975
No 127
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.86 E-value=4.6e-21 Score=137.97 Aligned_cols=152 Identities=17% Similarity=0.276 Sum_probs=112.3
Q ss_pred CCCceEeecCCcEEEEeeecc---CCCCeEEEEeCCeeeC------------------------------CCCcEEee--
Q psy15206 80 SPQLSVAKEGQSVQLECHAEG---HPIPTISWRRENNAIL------------------------------PNGQTIFT-- 124 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~---~~~~~~~W~~~~~~~~------------------------------~~~~~~~~-- 124 (232)
.+....+.+|+.+.|.|.+.+ .+.+.+.|++++.... ...+....
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 87 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANL 87 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCT
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccC
Confidence 344567889999999999887 6778899999864320 01111111
Q ss_pred -CCeEEECCCCCCCCeEEEEEeEeCCCCc----eeeEEEEEEEec---cEEEec-cceeeeeccCeEEEEEEeecCCCCe
Q psy15206 125 -GSTLQIPRITKEDRGAYYCVAQNGIGRG----ARRKIEVKVEFA---PIVTVQ-STRIGQALHHDMDLDCHIEAYPHPI 195 (232)
Q Consensus 125 -~~~l~i~~~~~~~~g~y~C~~~~~~~~~----~~~~~~l~v~~~---p~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~~ 195 (232)
...|.|.+++.+|.|.|.|.+.+..+.. ....+.|.|..+ |.+... +....+..|+.+.|.|.+.+.|.|.
T Consensus 88 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~ 167 (250)
T 2fbo_J 88 AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANAN 167 (250)
T ss_dssp TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCE
T ss_pred CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCe
Confidence 2479999999999999999999876542 134677777653 333333 4456677899999999999999999
Q ss_pred EEEeeCCEEecCC------------------------------CeEEEEEeccccCCceEEEEecC
Q psy15206 196 LYWAKDGEIVVND------------------------------EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 196 ~~W~~~g~~~~~~------------------------------~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|+|++..+... ....|.+.++..+|+|.|+|.|.
T Consensus 168 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 233 (250)
T 2fbo_J 168 VTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELA 233 (250)
T ss_dssp EEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEE
T ss_pred eEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEec
Confidence 9999998755321 12477888889999999999974
No 128
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.86 E-value=7.5e-22 Score=148.90 Aligned_cols=156 Identities=17% Similarity=0.272 Sum_probs=120.0
Q ss_pred ecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC--cEEeeCCeEEECCCCCCCCe-EEEEEeE
Q psy15206 70 VDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG--QTIFTGSTLQIPRITKEDRG-AYYCVAQ 146 (232)
Q Consensus 70 v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~--~~~~~~~~l~i~~~~~~~~g-~y~C~~~ 146 (232)
+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ......+.|.|.++...|.| .|+|.+.
T Consensus 155 ~c~~P~i~~-~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~ 233 (347)
T 2ifg_A 155 SCGVPTLKV-QVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAE 233 (347)
T ss_dssp TCCCCEEEE-ECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCE
T ss_pred cCCCCceec-cCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEE
Confidence 334565543 4555678899999999999999999999999886543211 11223457999999999999 9999999
Q ss_pred eCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe----------------
Q psy15206 147 NGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------------- 210 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------------- 210 (232)
+..|. ....+.+.|..+|.+ .......|+.+.|.|.+.|.|.|.+.|+++|..+.....
T Consensus 234 n~~g~-~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 308 (347)
T 2ifg_A 234 NDVGR-AEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRH 308 (347)
T ss_dssp ETTEE-CCEEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEE
T ss_pred cCCCC-EEEEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccc
Confidence 98766 356677777777776 122345789999999999999999999999988774432
Q ss_pred EEEEEeccccCCceEEEEecC
Q psy15206 211 HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 211 ~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+.+.++...|+|.|+|.|.
T Consensus 309 ~~L~I~~v~~~d~G~Y~C~a~ 329 (347)
T 2ifg_A 309 GCLRLNQPTHVNNGNYTLLAA 329 (347)
T ss_dssp EEEEESSCCGGGCEEEEEEEE
T ss_pred eEEEECCCCcccCceEEEEEe
Confidence 237777888899999999974
No 129
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.86 E-value=1e-20 Score=132.93 Aligned_cols=151 Identities=17% Similarity=0.231 Sum_probs=105.9
Q ss_pred CCceEeecCCcEEEEeeeccCC---CCeEEEEeCC--eee------------CCCCcEEee----CCeEEECCCCCCCCe
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP---IPTISWRREN--NAI------------LPNGQTIFT----GSTLQIPRITKEDRG 139 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~---~~~~~W~~~~--~~~------------~~~~~~~~~----~~~l~i~~~~~~~~g 139 (232)
+....+.+|+.+.|.|.+.+.+ .+.+.|++++ ..+ ....++... ...|.|.+++.+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 4556788999999999998876 4689999863 221 011233221 237999999999999
Q ss_pred EEEEEeEeCCCCceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecCCCC--eEEEeeCCEEecCC-----
Q psy15206 140 AYYCVAQNGIGRGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHP--ILYWAKDGEIVVND----- 208 (232)
Q Consensus 140 ~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~g~~~~~~----- 208 (232)
.|.|.+.+..+........+.|. .+|.+...+.......|+.++|.|.+.|.+++ .+.|+|+|..+..+
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~ 166 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQ 166 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECC
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCC
Confidence 99999998654322233455553 46777665544445578899999999886443 89999999877532
Q ss_pred ------CeE----EEEEeccccCCceEEEEecC
Q psy15206 209 ------EYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ------~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+ .+.+......|+|.|+|.|.
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~ 199 (212)
T 1q0x_L 167 PSKQSNNKYMASSYLTLTARAWERHSSYSCQVT 199 (212)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEE
T ss_pred ceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEE
Confidence 111 35566666789999999974
No 130
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.86 E-value=2.6e-20 Score=134.87 Aligned_cols=142 Identities=15% Similarity=0.217 Sum_probs=113.4
Q ss_pred CCCceEeecCCcEEEEeeeccCCCC-eEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIP-TISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
.+....+.+|+.+.|.|.+.+.+.+ .+.|++++..+... ...|.|.++..+|.|.|+|.+.+..++ ..+.
T Consensus 7 ~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~~~s---~~~~ 77 (262)
T 3rjd_A 7 QPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS------TPSYRITSASVNDSGEYRCQRGLSGRS---DPIQ 77 (262)
T ss_dssp SSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC------SSEEEESSCCGGGCEEEEEEESSSCCC---CCEE
T ss_pred CCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc------CCeEEEecCCcccCeEEEEEEecCCcc---ccEE
Confidence 4555678899999999999988877 89999999876432 467999999999999999999876543 3566
Q ss_pred EEEEeccEEEeccceeeeeccCeEEEEEEe-ecCCCCeEEEeeCCEEecCC-CeEEEEEeccccCCceEEEEecC
Q psy15206 159 VKVEFAPIVTVQSTRIGQALHHDMDLDCHI-EAYPHPILYWAKDGEIVVND-EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 159 l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~g~~~~~~-~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|..++.. ..+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+... ....+.+.++...|+|.|+|.+.
T Consensus 78 l~v~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 151 (262)
T 3rjd_A 78 LEIHRGWLL-LQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGM 151 (262)
T ss_dssp EEEECSSEE-EEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEE
T ss_pred EEEeccceE-ecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChhhCEEEEEEEe
Confidence 777766544 34455667899999999999 77888899999999887643 24466777888899999999874
No 131
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.86 E-value=6e-21 Score=134.31 Aligned_cols=150 Identities=13% Similarity=0.123 Sum_probs=105.3
Q ss_pred CCceEeecC--CcEEEEeeeccCCCCeEEEEeC---CeeeCCCCcEE-eeCCeEEECCCCCCCCeEEEEEeEeCCCCcee
Q psy15206 81 PQLSVAKEG--QSVQLECHAEGHPIPTISWRRE---NNAILPNGQTI-FTGSTLQIPRITKEDRGAYYCVAQNGIGRGAR 154 (232)
Q Consensus 81 ~~~~~~~~g--~~~~l~C~~~~~~~~~~~W~~~---~~~~~~~~~~~-~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~ 154 (232)
+....+.+| +.+.|.|.+.+ |.+.+.|++. +..+....... .....|.|.++..+|+|.|+|.+.+..+...+
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s 92 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQS 92 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEEC
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEE
Confidence 355678889 99999999976 6688999885 44433322222 33567999999999999999999885443333
Q ss_pred eEEEEEEEe--ccEEEeccce-eeeeccCeEEEEEEeecCCC--CeEEEeeCCEEecC-----------------CCeEE
Q psy15206 155 RKIEVKVEF--APIVTVQSTR-IGQALHHDMDLDCHIEAYPH--PILYWAKDGEIVVN-----------------DEYHS 212 (232)
Q Consensus 155 ~~~~l~v~~--~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~--~~~~W~~~g~~~~~-----------------~~~~~ 212 (232)
..+.+.|.. +|.+...+.. ..+..|++++|.|.+.|.|. +.+.|+++|..+.. .....
T Consensus 93 ~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (213)
T 2x1w_L 93 IMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLST 172 (213)
T ss_dssp CCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEE
T ss_pred EEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEE
Confidence 335666643 4445554443 47889999999999998654 47999998754211 11235
Q ss_pred EEEeccccCCceEEEEecC
Q psy15206 213 ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 213 ~~~~~~~~~d~g~Y~C~~~ 231 (232)
|.+.++..+|+|.|+|.|.
T Consensus 173 L~I~~v~~~D~G~Y~C~a~ 191 (213)
T 2x1w_L 173 LTIDGVTRSDQGLYTCAAS 191 (213)
T ss_dssp EEESSCCGGGCEEEEEEEE
T ss_pred EEECCCCcccCEEEEEEEe
Confidence 7888899999999999874
No 132
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.86 E-value=9.3e-20 Score=143.01 Aligned_cols=209 Identities=16% Similarity=0.276 Sum_probs=129.5
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCcEe----------------------ee--------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNFKR----------------------LG-------------------- 55 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~~~----------------------~~-------------------- 55 (232)
+.++.+.+|++++|.|.+.+.+ ...+.|+|+... .+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (475)
T 1iga_A 8 SGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSL 87 (475)
T ss_pred CCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCC
Confidence 6788999999999999998754 678999984210 11
Q ss_pred ------eEEEEeeee------------cCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CC-C-eEEEEe
Q psy15206 56 ------RLHLAIPYT------------SPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PI-P-TISWRR 110 (232)
Q Consensus 56 ------~~~~~~~~~------------~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~-~~~W~~ 110 (232)
.|.|..... ...|.|.. +|.+....+. ...+|+.+.|.|.+.|. |. + .+.|++
T Consensus 88 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~g~~v~L~C~~~g~~P~~p~~v~W~~ 165 (475)
T 1iga_A 88 RPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLC--STQPDGNVVIACLVQGFFPQEPLSVTWSE 165 (475)
T ss_pred ChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCcc--ccCCCCeEEEEEEEeeecCCCceEEEEcC
Confidence 222322110 12344432 2322221111 12579999999999986 55 4 899998
Q ss_pred CCeeeCC---------CCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEE------------------e
Q psy15206 111 ENNAILP---------NGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVE------------------F 163 (232)
Q Consensus 111 ~~~~~~~---------~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~------------------~ 163 (232)
++..... ........+.|.|..+...|.|.|+|.+.+..+......+.+.|. .
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~ 245 (475)
T 1iga_A 166 SGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCC 245 (475)
T ss_pred CCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCC
Confidence 8743210 001111123588888888999999999999765433333333221 2
Q ss_pred ccEEEec-cceeeeeccCeEEEEEEeecCCC---CeEEEeeCCEEec---------CCCe----EEEEEeccccCCceEE
Q psy15206 164 APIVTVQ-STRIGQALHHDMDLDCHIEAYPH---PILYWAKDGEIVV---------NDEY----HSISNFGTSEGTTGSL 226 (232)
Q Consensus 164 ~p~~~~~-~~~~~~~~g~~~~l~C~~~~~p~---~~~~W~~~g~~~~---------~~~~----~~~~~~~~~~~d~g~Y 226 (232)
+|.+... +....+..|+.+.|.|.+.|.++ +.+.| +++.... .++. ..|.+.++...|+|.|
T Consensus 246 ~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y 324 (475)
T 1iga_A 246 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTF 324 (475)
T ss_pred CcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcE
Confidence 4554333 33333578999999999998754 58999 4332211 0111 2467778888999999
Q ss_pred EEecC
Q psy15206 227 QCKVP 231 (232)
Q Consensus 227 ~C~~~ 231 (232)
+|.|.
T Consensus 325 ~C~a~ 329 (475)
T 1iga_A 325 TCTAA 329 (475)
T ss_pred EEEEE
Confidence 99974
No 133
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.85 E-value=2.4e-20 Score=129.12 Aligned_cols=149 Identities=29% Similarity=0.489 Sum_probs=112.3
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee-----------------------------eeEEEE
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL-----------------------------GRLHLA 60 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~-----------------------------~~~~~~ 60 (232)
..+|.|... +.+..+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|.
T Consensus 3 ~~~P~~~~~-~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 81 (194)
T 2a38_A 3 TQAPTFTQP-LQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLK 81 (194)
T ss_dssp CEEEEEEEC-CCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCeEEcc-CCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEE
Confidence 458999887 88899999999999999999898999999954321 356665
Q ss_pred eeee------cCceeec---CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee--C--Ce
Q psy15206 61 IPYT------SPEAQVD---TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT--G--ST 127 (232)
Q Consensus 61 ~~~~------~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~--~--~~ 127 (232)
.... ...|.|. .+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+....+.... + ..
T Consensus 82 ~~n~~~~~~~~~~l~v~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 160 (194)
T 2a38_A 82 ATNGSGQATSTAELLVKAETAPPNFVQ-RLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYS 160 (194)
T ss_dssp EEETTEEEEEEEEEEEECCCEEEEEEE-CCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEE
T ss_pred EEcCCceEeEEEEEEEccCCCCCEEEe-CCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEE
Confidence 5221 4455554 2343333 455667888999999999999999999999999887655444332 2 27
Q ss_pred EEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEE
Q psy15206 128 LQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKV 161 (232)
Q Consensus 128 l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 161 (232)
|.|.++..+|.|.|+|.+.|..|. ....+.+.|
T Consensus 161 L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 193 (194)
T 2a38_A 161 LLIAEAYPEDSGTYSVNATNSVGR-ATSTAELLV 193 (194)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred EEECCCChhcCeEEEEEEEeCCCc-eEEEEEEEE
Confidence 999999999999999999998876 445555554
No 134
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.85 E-value=6.2e-20 Score=127.38 Aligned_cols=150 Identities=23% Similarity=0.413 Sum_probs=113.1
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee-----------------------------eeEEEEe
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL-----------------------------GRLHLAI 61 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~-----------------------------~~~~~~~ 61 (232)
.+|.|... +.+..+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|..
T Consensus 3 ~~P~~~~~-~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 3 MAPHFKEE-LRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp CCCEEEEC-CCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCCEEEEc-CCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 58999888 88899999999999999999999999999954332 2455544
Q ss_pred ee------ecCceeecCCcEEecC----CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe----eCCe
Q psy15206 62 PY------TSPEAQVDTPPVILNN----SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF----TGST 127 (232)
Q Consensus 62 ~~------~~~~l~v~~~p~~~~~----~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~----~~~~ 127 (232)
.. ....|.|..+|..... .+....+..|+.+.|.|.+.+.|.+.+.|++++..+....+... ....
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (197)
T 2j8h_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (197)
T ss_dssp EETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEE
T ss_pred EECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceE
Confidence 21 1555666655544321 12345677899999999999999999999999988765444332 2357
Q ss_pred EEECC-CCCCCCeEEEEEeEeCCCCceeeEEEEEEE
Q psy15206 128 LQIPR-ITKEDRGAYYCVAQNGIGRGARRKIEVKVE 162 (232)
Q Consensus 128 l~i~~-~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 162 (232)
|.|.+ +..+|.|.|+|.+.|..|. ....+.|.|.
T Consensus 162 L~i~~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~ 196 (197)
T 2j8h_A 162 LVFPNGVERKDAGFYVVCAKNRFGI-DQKTVELDVA 196 (197)
T ss_dssp EECTTCCCGGGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred EEEeCCCCcccCEeEEEEEEeCCCc-EeEEEEEEEe
Confidence 99999 9999999999999998876 5566666653
No 135
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.85 E-value=4.8e-20 Score=133.27 Aligned_cols=151 Identities=19% Similarity=0.271 Sum_probs=111.7
Q ss_pred CCceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eeeC-----------------CCCcEEee------CCeEEECCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAIL-----------------PNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~-----------------~~~~~~~~------~~~l~i~~~ 133 (232)
+....+.+|+++.|.|.+.+.+ .+.+.|+++. ..+. ...++... ..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL 86 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC
Confidence 4456778999999999998865 5689999842 2210 11233222 237999999
Q ss_pred CCCCCeEEEEEeEeCCCC----ceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCC-----eEEEee--CC
Q psy15206 134 TKEDRGAYYCVAQNGIGR----GARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHP-----ILYWAK--DG 202 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~~----~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~~~W~~--~g 202 (232)
+.+|+|.|.|.+.+..+. .......|.|..+|.+...+....+..|++++|.|.+.+.|.+ .+.|+| +|
T Consensus 87 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g 166 (256)
T 1nqb_A 87 TSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPG 166 (256)
T ss_dssp CGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTT
T ss_pred ChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCC
Confidence 999999999999987542 1223457777777777777777788999999999999998875 899999 55
Q ss_pred EEec---------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 203 EIVV---------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 203 ~~~~---------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+. ....+.|.+.++..+|+|.|+|.|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 216 (256)
T 1nqb_A 167 QSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQG 216 (256)
T ss_dssp SCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred CCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEc
Confidence 4321 1134568888899999999999984
No 136
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.85 E-value=1.6e-20 Score=129.13 Aligned_cols=139 Identities=17% Similarity=0.237 Sum_probs=104.5
Q ss_pred ceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC--------------CCcEEee-------CCeEEECCCCCCCCeEE
Q psy15206 83 LSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP--------------NGQTIFT-------GSTLQIPRITKEDRGAY 141 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~--------------~~~~~~~-------~~~l~i~~~~~~~~g~y 141 (232)
...+.+|+.+.|.|.+.+.+.+.+.|++++..... ..+.... ..+|.|.+++.+|.|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 35677899999999998888889999998753110 1112211 33599999999999999
Q ss_pred EEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeEEEEEeccccC
Q psy15206 142 YCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYHSISNFGTSEG 221 (232)
Q Consensus 142 ~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~ 221 (232)
.|.+.+..+ .+.+.|.. +.. +....+..|+++.|.|.+.+.|.+.+.|+++|..+.. ....|.+.++...
T Consensus 84 ~C~~~~~~~-----~~~l~V~~---~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~L~i~~v~~~ 153 (184)
T 2ny1_B 84 ICEVEDQKE-----EVQLLVFG---LTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ-GGKTLSVSQLELQ 153 (184)
T ss_dssp EEEETTEEE-----EEEEEEEE---EEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEE-ESSEEEESSCCGG
T ss_pred EEEEEcCCC-----cEEEEEEE---ecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcccc-CceEEEEecCCcC
Confidence 999986532 34555553 222 4445678999999999999999999999999865533 3456777888999
Q ss_pred CceEEEEecC
Q psy15206 222 TTGSLQCKVP 231 (232)
Q Consensus 222 d~g~Y~C~~~ 231 (232)
|+|.|+|.|.
T Consensus 154 d~G~Y~C~a~ 163 (184)
T 2ny1_B 154 DSGTWTCTVL 163 (184)
T ss_dssp GCEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 9999999874
No 137
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.85 E-value=1.2e-20 Score=133.15 Aligned_cols=149 Identities=19% Similarity=0.265 Sum_probs=104.5
Q ss_pred ceEeecCCcEEEEeeeccC-CCCeEEEEeCC--eee-------------C---CCCcEEe----eCCeEEECCCCCCCCe
Q psy15206 83 LSVAKEGQSVQLECHAEGH-PIPTISWRREN--NAI-------------L---PNGQTIF----TGSTLQIPRITKEDRG 139 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~~--~~~-------------~---~~~~~~~----~~~~l~i~~~~~~~~g 139 (232)
...+.+|+.+.|.|.+.+. +.+.+.|++.. ... . ...++.. ...+|.|.+++.+|.|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA 88 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCE
Confidence 5678899999999999988 88899999832 100 0 0012221 1246999999999999
Q ss_pred EEEEEeEeCCC----CceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeec-CCCC-eEEEeeCCEEecC--
Q psy15206 140 AYYCVAQNGIG----RGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEA-YPHP-ILYWAKDGEIVVN-- 207 (232)
Q Consensus 140 ~y~C~~~~~~~----~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~g~~~~~-- 207 (232)
.|.|.+.+..+ ........+.|. .+|.+...+.......|+.++|.|.+.| .|.+ .+.|+|+|..+..
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~ 168 (218)
T 3s96_B 89 IYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGV 168 (218)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC----
T ss_pred EEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCce
Confidence 99999988654 112334567776 5677766555555567899999999988 5666 8999999987754
Q ss_pred --------CCeEE----EEEeccccCCceEEEEecC
Q psy15206 208 --------DEYHS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 208 --------~~~~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
+..+. +.+......|+|.|+|.|.
T Consensus 169 ~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~ 204 (218)
T 3s96_B 169 DTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVT 204 (218)
T ss_dssp ----------CEEEEEEEEEEHHHHHTCSCEEEEEE
T ss_pred ecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEE
Confidence 22333 4445555578999999984
No 138
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.85 E-value=2.1e-20 Score=131.45 Aligned_cols=151 Identities=18% Similarity=0.265 Sum_probs=107.6
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCCe--ee------------CCCCcEEe----eCCeEEECCCCCCCCeEEE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRRENN--AI------------LPNGQTIF----TGSTLQIPRITKEDRGAYY 142 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~~------------~~~~~~~~----~~~~l~i~~~~~~~~g~y~ 142 (232)
+....+.+|+.+.|.|.+.+.+.+.+.|++... .. ....++.. ...+|.|.+++.+|+|.|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3r06_A 8 PSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYY 87 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEE
T ss_pred CCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEE
Confidence 455678899999999999998888999998421 10 01122222 1237999999999999999
Q ss_pred EEeEeCCCCceeeEEEEEE---EeccEEEeccceeeeeccCeEEEEEEeecCCCC--eEEEeeCCEEecCC---------
Q psy15206 143 CVAQNGIGRGARRKIEVKV---EFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHP--ILYWAKDGEIVVND--------- 208 (232)
Q Consensus 143 C~~~~~~~~~~~~~~~l~v---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~g~~~~~~--------- 208 (232)
|.+.+..+........+.| ..+|.+...+.......|+.+.|.|.+.|.+++ .+.|+|+|..+...
T Consensus 88 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 167 (213)
T 3r06_A 88 CQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQD 167 (213)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCC
T ss_pred EecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCcee
Confidence 9998865433334456666 567777776665556678889999999886643 79999999877532
Q ss_pred ---CeE----EEEEeccccCCceEEEEecC
Q psy15206 209 ---EYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ---~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+ .+.+......|+|.|+|.|.
T Consensus 168 ~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~ 197 (213)
T 3r06_A 168 SKDSTYSLSSTLSLTKADYERHNLYTCEVT 197 (213)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCCCcEEEEEEEEeCHHHhccCCeEEEEEE
Confidence 222 33344555578999999974
No 139
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.85 E-value=4.1e-22 Score=154.67 Aligned_cols=209 Identities=17% Similarity=0.302 Sum_probs=132.5
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCc--Ee--------------------eeeEEEE-----------e---
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNF--KR--------------------LGRLHLA-----------I--- 61 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~--~~--------------------~~~~~~~-----------~--- 61 (232)
+.++.+.+|++++|.|.+.+.+ .+.+.|+|+. .. .+|+... +
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (434)
T 1igy_B 6 SGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSL 85 (434)
T ss_dssp CCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSB
T ss_pred CCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCC
Confidence 5678899999999999999754 6789999842 11 1122211 1
Q ss_pred ------eee------------cCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEEeCCeeeCC
Q psy15206 62 ------PYT------------SPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWRRENNAILP 117 (232)
Q Consensus 62 ------~~~------------~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~~~ 117 (232)
.|. ...|.|.. +|.+....+. ..+.+|+.+.|.|.+.|. |.+ .+.|++++.....
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~ 164 (434)
T 1igy_B 86 TSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGV 164 (434)
T ss_dssp CGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCC-CCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSE
T ss_pred ChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCc-cccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCe
Confidence 221 22444432 2333221221 234579999999999885 666 8999998864210
Q ss_pred -------CCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEE----------e--ccEEEeccceee--e
Q psy15206 118 -------NGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVE----------F--APIVTVQSTRIG--Q 176 (232)
Q Consensus 118 -------~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~----------~--~p~~~~~~~~~~--~ 176 (232)
........+.|.|.++..+| |.|+|.+.|..+... ....+.+. . .|.+...+.... +
T Consensus 165 ~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~-~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v 242 (434)
T 1igy_B 165 HTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTK-VDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTL 242 (434)
T ss_dssp EECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCC-EEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHH
T ss_pred EecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCcc-ceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhc
Confidence 00111123468899999888 999999999876521 22222111 0 144444333222 7
Q ss_pred eccCeEEEEEEeecCC----CCeEEEeeCCEEecCC----------C----eEEEEEeccccCCceEEEEecC
Q psy15206 177 ALHHDMDLDCHIEAYP----HPILYWAKDGEIVVND----------E----YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 177 ~~g~~~~l~C~~~~~p----~~~~~W~~~g~~~~~~----------~----~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..|+.+.|.|.+.|.+ .+.|.|+|+|..+... + ...|.+..+...|+|.|+|.|.
T Consensus 243 ~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 315 (434)
T 1igy_B 243 LITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVN 315 (434)
T ss_dssp STTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBC
T ss_pred ccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEE
Confidence 7899999999999884 3479999998765321 1 1245667777789999999974
No 140
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.85 E-value=8.7e-20 Score=126.53 Aligned_cols=153 Identities=20% Similarity=0.375 Sum_probs=116.2
Q ss_pred cccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee---------------------------eeEEEE
Q psy15206 8 QVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL---------------------------GRLHLA 60 (232)
Q Consensus 8 ~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~---------------------------~~~~~~ 60 (232)
.+..+|.|... +.++.+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|.
T Consensus 3 ~~~~~P~~~~~-~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 81 (197)
T 3lcy_A 3 MSGEAPGIRKE-MKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCI 81 (197)
T ss_dssp CCCEEEEEEEC-CCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEE
T ss_pred ccCCCCccccc-CCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEE
Confidence 35678999988 88999999999999999999888999999954332 356665
Q ss_pred eee------ecCceeecCCcEEecC--CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeC----CeE
Q psy15206 61 IPY------TSPEAQVDTPPVILNN--SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTG----STL 128 (232)
Q Consensus 61 ~~~------~~~~l~v~~~p~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~----~~l 128 (232)
... ....|.|..+|..... ......+..|+.+.|.|.+.+.|.+.+.|++++..+.......... ..|
T Consensus 82 ~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L 161 (197)
T 3lcy_A 82 ATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHL 161 (197)
T ss_dssp EECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEE
T ss_pred EECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEE
Confidence 422 1455666655555432 2344567789999999999999999999999998876555543332 579
Q ss_pred EECCCCC-CCCeEEEEEeEeCCCCceeeEEEEEEE
Q psy15206 129 QIPRITK-EDRGAYYCVAQNGIGRGARRKIEVKVE 162 (232)
Q Consensus 129 ~i~~~~~-~~~g~y~C~~~~~~~~~~~~~~~l~v~ 162 (232)
.|.++.. +|.|.|+|.+.|..|. ....+.+.|.
T Consensus 162 ~i~~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 195 (197)
T 3lcy_A 162 VMKNVQRKTHAGKYKVQLSNVFGT-VDAILDVEIQ 195 (197)
T ss_dssp EESSCCHHHHCEEEEEEEECSSCE-EEEEEEEEEE
T ss_pred EEccccchhhCceEEEEEEcCcCc-eEEEEEEEEe
Confidence 9999985 8999999999998887 4556666654
No 141
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.85 E-value=1e-19 Score=126.18 Aligned_cols=146 Identities=18% Similarity=0.373 Sum_probs=112.4
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEec-CCCCCeEEEEeCcEee-----------------------------------
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAE-GHPIPTISWRRNFKRL----------------------------------- 54 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~-~~p~~~~~W~~~~~~~----------------------------------- 54 (232)
++|.|... +.+..+.+|++++|.|.+. +.|.+.+.|++++..+
T Consensus 1 e~~~~~~~-p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 79 (195)
T 2c5d_C 1 EESPFVGN-PGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSD 79 (195)
T ss_dssp -CCSEEEC-CCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTT
T ss_pred CCCeeccC-hhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccC
Confidence 47889888 8899999999999999999 8899999999965332
Q ss_pred -eeEEEEeeee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCC-eEEEEeCCeeeCCCCcEEeeC
Q psy15206 55 -GRLHLAIPYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIP-TISWRRENNAILPNGQTIFTG 125 (232)
Q Consensus 55 -~~~~~~~~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~ 125 (232)
|.|.|..... .+.|.|..+|.+.. .+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+...... ...
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-~~~ 157 (195)
T 2c5d_C 80 TGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLE-EPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-GPQ 157 (195)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEECCSCEEEE-CCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-SCC
T ss_pred CcEEEEEEEeCCCceecccEEEEEecCCeEEc-CCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-CCC
Confidence 2344433211 36778887887655 4555778889999999999999999 89999999877544322 345
Q ss_pred CeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEE
Q psy15206 126 STLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKV 161 (232)
Q Consensus 126 ~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 161 (232)
+.|.|.++. |.|.|+|.+.|..|...+..+.|.|
T Consensus 158 ~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 158 RSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 679999887 7899999999988764345666666
No 142
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.85 E-value=3e-20 Score=133.03 Aligned_cols=144 Identities=12% Similarity=0.196 Sum_probs=107.0
Q ss_pred EeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCC--C-cEEeeCCeEEECCCCCCCCeEEEEEeEeCCC-CceeeEEEEE
Q psy15206 85 VAKEGQSVQLECHAEGHPIPTISWRRENNAILPN--G-QTIFTGSTLQIPRITKEDRGAYYCVAQNGIG-RGARRKIEVK 160 (232)
Q Consensus 85 ~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~--~-~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~-~~~~~~~~l~ 160 (232)
.+.+|+++.|.|.+.+ +...+.|+|++..+... . ........|.|.+++.+|+|.|+|.+.+..+ ...+..+.+.
T Consensus 17 ~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~ 95 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLV 95 (242)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEE
T ss_pred ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEE
Confidence 6789999999999864 44579999998765311 0 0111235799999999999999999987532 2234556777
Q ss_pred EEe---ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEec-----CCCeEEEEEeccccCCceEEEEecC
Q psy15206 161 VEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVV-----NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 161 v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~-----~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
|.. +|.+...+. ..+..|++++|.|.+.+. .+.+.|+|+|..+. ......+.+.+++.+|+|.|+|.+.
T Consensus 96 V~~~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~ 172 (242)
T 1p6f_A 96 VTEMYDTPTLSVHPG-PEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGS 172 (242)
T ss_dssp EECCSCCCEEEEESC-SEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEEEEECSSEEEEEEEECCGGGCEEEEEEEE
T ss_pred eecccCCCceEccCC-CccCCCCcEEEEEecCCC-CCEEEEEECCCccCccccCCCceEEEEeCCCccccCEEEEEEEE
Confidence 763 566666553 457899999999998765 45899999986543 3456678888899999999999873
No 143
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.85 E-value=1.8e-19 Score=124.81 Aligned_cols=147 Identities=16% Similarity=0.226 Sum_probs=103.9
Q ss_pred CCceEeecCCcEEEEeeecc-CCCCeEEEEeCCeeeC---C-C--------------CcEE-eeCCeEEECCCCCCCCeE
Q psy15206 81 PQLSVAKEGQSVQLECHAEG-HPIPTISWRRENNAIL---P-N--------------GQTI-FTGSTLQIPRITKEDRGA 140 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~~~~~---~-~--------------~~~~-~~~~~l~i~~~~~~~~g~ 140 (232)
+....+.+|+++.|.|.+.+ .+.+.+.|++++..+. . . .+.. ..+.+|.|.+++.+|.|.
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~ 84 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGS 84 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEE
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCce
Confidence 45567789999999999875 4456899999875431 1 0 0111 135689999999999999
Q ss_pred EEEEeEeCCCCceeeEEEEEEEecc---EEEeccceeeeeccC-eEEEEEEeecC-CCCeEEEeeCCEEecCCCeEEEEE
Q psy15206 141 YYCVAQNGIGRGARRKIEVKVEFAP---IVTVQSTRIGQALHH-DMDLDCHIEAY-PHPILYWAKDGEIVVNDEYHSISN 215 (232)
Q Consensus 141 y~C~~~~~~~~~~~~~~~l~v~~~p---~~~~~~~~~~~~~g~-~~~l~C~~~~~-p~~~~~W~~~g~~~~~~~~~~~~~ 215 (232)
|.|.+.+..+. ....+.|.|..++ .+.... .....|. .++|.|.+.|. |.+.+.|+++|..+.......+..
T Consensus 85 Y~C~~~~~~~~-~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~~l~i~~ 161 (193)
T 2if7_A 85 YRAQISTKTSA-KLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSW 161 (193)
T ss_dssp EEEEEECSSCE-EEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSSEEEEEE
T ss_pred EEEEEEecCCC-eEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCCeEEEEe
Confidence 99999987665 3456777776554 333222 1223455 89999999985 578999999999887766666543
Q ss_pred eccccCCceEEEEecC
Q psy15206 216 FGTSEGTTGSLQCKVP 231 (232)
Q Consensus 216 ~~~~~~d~g~Y~C~~~ 231 (232)
. ....|+|.|+|.|.
T Consensus 162 ~-~~~~d~G~Y~C~a~ 176 (193)
T 2if7_A 162 D-PRISSEQDYTCIAE 176 (193)
T ss_dssp C-TTTCSCCEEEEEEE
T ss_pred c-cCcCCCCcEEEEEE
Confidence 3 23348999999974
No 144
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=146.01 Aligned_cols=157 Identities=15% Similarity=0.219 Sum_probs=113.3
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccC-CCCeEEEEeCCeeeCCCCcEEe--eCCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGH-PIPTISWRRENNAILPNGQTIF--TGSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
.+|.+.. +....+.+|+.+.|.|.+.+. |.+.+.|++++..+....+... ....|.|.++..+|.|.|+|.+.+.
T Consensus 6 ~~P~~~~--~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 83 (317)
T 2y25_A 6 TGPHFVE--YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDD 83 (317)
T ss_dssp SCCEEEE--EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESS
T ss_pred CCCcEee--eeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECC
Confidence 4555553 334778899999999999886 6789999999988765444332 2358999999999999999999987
Q ss_pred CCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeec----------CCCCeEEEeeCCEEecCCCe--------
Q psy15206 149 IGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEA----------YPHPILYWAKDGEIVVNDEY-------- 210 (232)
Q Consensus 149 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~----------~p~~~~~W~~~g~~~~~~~~-------- 210 (232)
.+. ....+.+.+...|.+...+....+..|+.+.|.|.+.+ .|.+.+.|+++|..+....+
T Consensus 84 ~g~-~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 162 (317)
T 2y25_A 84 RGK-DKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGE 162 (317)
T ss_dssp SCE-EEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSS
T ss_pred CCc-EEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCC
Confidence 765 33444444443333322333344556778888887766 78889999999987754433
Q ss_pred -EEEEEeccccCCceEEEEecC
Q psy15206 211 -HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 211 -~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+.+.++...|+|.|+|.|.
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~ 184 (317)
T 2y25_A 163 QIWLQINEPTPNDKGKYVMELF 184 (317)
T ss_dssp EEEEEEESCCGGGCEEEEEEEE
T ss_pred EEEEEECcCCcccCeeEEEEEE
Confidence 347778888899999999874
No 145
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.85 E-value=4e-20 Score=132.02 Aligned_cols=151 Identities=19% Similarity=0.283 Sum_probs=106.4
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCCe--ee------------CCCCcEEe----eCCeEEECCCCCCCCeEEE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRRENN--AI------------LPNGQTIF----TGSTLQIPRITKEDRGAYY 142 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~~------------~~~~~~~~----~~~~l~i~~~~~~~~g~y~ 142 (232)
+....+.+|+++.|.|.+.+.+.+.+.|++... .. ....++.. ...+|.|.+++.+|.|.|.
T Consensus 31 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 110 (237)
T 3sob_L 31 PSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYY 110 (237)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEE
Confidence 455678899999999999888888999998431 10 01122222 2347999999999999999
Q ss_pred EEeEeCCCCceeeEEEEEE---EeccEEEeccceeeeeccCeEEEEEEeecC-C-CCeEEEeeCCEEecC----------
Q psy15206 143 CVAQNGIGRGARRKIEVKV---EFAPIVTVQSTRIGQALHHDMDLDCHIEAY-P-HPILYWAKDGEIVVN---------- 207 (232)
Q Consensus 143 C~~~~~~~~~~~~~~~l~v---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~~~W~~~g~~~~~---------- 207 (232)
|.+.+..+........+.| ..+|.+...+.......|+.++|.|.+.+. | .+.+.|+|+|..+..
T Consensus 111 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 190 (237)
T 3sob_L 111 CQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQD 190 (237)
T ss_dssp EEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCC
T ss_pred EeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccc
Confidence 9998765432233345555 456777665555455578899999999884 4 479999999987653
Q ss_pred --CCeE----EEEEeccccCCceEEEEecC
Q psy15206 208 --DEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 208 --~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
++.+ .+.+......|+|.|+|.|.
T Consensus 191 ~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~ 220 (237)
T 3sob_L 191 SKDSTYSLSSTLTLSKADYEKHKVYACEVT 220 (237)
T ss_dssp TTTCCEEEEEEEEEEHHHHTTCCEEEEEEE
T ss_pred cCCCcEEEEEEEEEcHHHccCCCcEEEEEe
Confidence 1222 34455666688999999974
No 146
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.85 E-value=6.3e-21 Score=142.84 Aligned_cols=149 Identities=15% Similarity=0.265 Sum_probs=112.0
Q ss_pred CceEeecCCcEEEEeeeccC---------CCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCe-EEEEEeEeCCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGH---------PIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRG-AYYCVAQNGIGR 151 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~---------~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g-~y~C~~~~~~~~ 151 (232)
....+.+|+.+.|.|.+.+. +.+.+.|++++..+....+. ...+.|.|.++..+|+| .|+|.+.+..|.
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~-~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~ 115 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR-VKNGDLWIANYTSNDSHRRYLCTVTTKNGD 115 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT-EETTEEEESSCCGGGGGCCEEEEEECTTSC
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce-eecceEEEcCCChHhCCCcEEEEEEeCCCc
Confidence 34567899999999998774 45689999998765432222 45789999999999999 999999998765
Q ss_pred ceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCC-CCeEEEeeCCEEecC-CCe-----EEEEEeccccCCce
Q psy15206 152 GARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYP-HPILYWAKDGEIVVN-DEY-----HSISNFGTSEGTTG 224 (232)
Q Consensus 152 ~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~W~~~g~~~~~-~~~-----~~~~~~~~~~~d~g 224 (232)
.....+.+.+..+|.+........+..|+.+.|.|.+.|.| .+.+.|+|+|..+.. ..+ ..|.+.+++..|+|
T Consensus 116 ~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G 195 (329)
T 3oq3_B 116 CVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSG 195 (329)
T ss_dssp EEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECSCCGGGCE
T ss_pred eeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEeecChhhCE
Confidence 33333333444455544333344466799999999999999 899999999988752 222 35677788889999
Q ss_pred EEEEecC
Q psy15206 225 SLQCKVP 231 (232)
Q Consensus 225 ~Y~C~~~ 231 (232)
.|+|.|.
T Consensus 196 ~Y~C~a~ 202 (329)
T 3oq3_B 196 RYDCYVH 202 (329)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999985
No 147
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.85 E-value=2e-19 Score=122.59 Aligned_cols=147 Identities=19% Similarity=0.319 Sum_probs=110.5
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCe-EEEEeCcEee-----------------eeEEEEeeee----cC
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPT-ISWRRNFKRL-----------------GRLHLAIPYT----SP 66 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~-~~W~~~~~~~-----------------~~~~~~~~~~----~~ 66 (232)
...+|.|... +....+.+|++++|.|.+.+.|.+. +.|++++..+ |.|.|..... .+
T Consensus 4 ~~~~p~i~~~-p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~ 82 (175)
T 1fnl_A 4 DLPKAVVFLE-PQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPV 82 (175)
T ss_dssp CCCCCEEEEE-SCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESSCSEEEESSCCGGGCEEEEEECSSSCCCCCE
T ss_pred CCCCCEEEEc-CCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCCceEEEEeCCCcccCEEEEEEeeCCcccccE
Confidence 3458888888 7778899999999999999877655 8999965432 5777766322 45
Q ss_pred ceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCC-eEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEe
Q psy15206 67 EAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIP-TISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVA 145 (232)
Q Consensus 67 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~ 145 (232)
.|.|..++..... ....+.+|+.+.|.|.+.+.+++ .+.|++++..+. .......|.|.++..+|.|.|+|.+
T Consensus 83 ~l~V~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~----~~~~~~~L~i~~v~~~d~G~Y~C~a 156 (175)
T 1fnl_A 83 QLEVHIGWLLLQA--PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRK----YFHHNSDFHIPKATLKDSGSYFCRG 156 (175)
T ss_dssp EEEEECSSEEEEC--SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEE----EEEECCCEEESSCCGGGCEEEEEEE
T ss_pred EEEEeCCCceeeC--CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEcc----CCCCCCEEEEcccChhhCeEEEEEE
Confidence 6666655554432 33567789999999999876654 899999998762 2334678999999999999999999
Q ss_pred EeCCCCceeeEEEEEEE
Q psy15206 146 QNGIGRGARRKIEVKVE 162 (232)
Q Consensus 146 ~~~~~~~~~~~~~l~v~ 162 (232)
.|..+...+..+.+.|.
T Consensus 157 ~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 157 LVGSKNVSSETVNITIT 173 (175)
T ss_dssp EETTEEEECCCEEEEEE
T ss_pred EcCCCCccCccEEEEEe
Confidence 99765545555666654
No 148
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.85 E-value=1.5e-19 Score=123.95 Aligned_cols=143 Identities=24% Similarity=0.381 Sum_probs=105.9
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee-----------------------------eeEEEEee
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL-----------------------------GRLHLAIP 62 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~-----------------------------~~~~~~~~ 62 (232)
+|.|... +.+..+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|...
T Consensus 2 ~~~~~~~-p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 2 GLKLMGA-PVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp -----CC-CEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred CCEEEeC-CcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 5777777 88899999999999999999899999999954322 34555542
Q ss_pred e-------ecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCC-eEEEEeCCeeeCCCCcEEeeCCeEEECCCC
Q psy15206 63 Y-------TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIP-TISWRRENNAILPNGQTIFTGSTLQIPRIT 134 (232)
Q Consensus 63 ~-------~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~ 134 (232)
. ..+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+ .+.|++++..+.... .....|.|.++
T Consensus 81 ~~~~~~~~~~~~l~V~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~---~~~~~L~i~~~- 155 (182)
T 1rhf_A 81 DGGETEISQPVWLTVEGVPFFTV-EPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPA---PSPSVLNVTGV- 155 (182)
T ss_dssp SCTTCEECCCEEEEEECSCEEEE-CCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSE---ESSEEEEECCC-
T ss_pred cCCCcEEEEEEEEEEecCCeEEe-cCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCC---CCceEEEEecc-
Confidence 1 155677777777665 4555778899999999999999998 899999998764322 24567889888
Q ss_pred CCCCeEEEEEeEeCCCCceeeEEEEEE
Q psy15206 135 KEDRGAYYCVAQNGIGRGARRKIEVKV 161 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~~~~~~~~l~v 161 (232)
+|.|.|+|.+.|..|......+.|.|
T Consensus 156 -~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 156 -TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp -SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -ccCeEEEEEEECCCCCcccceEEEEe
Confidence 58899999999988764334555544
No 149
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.84 E-value=6.4e-20 Score=128.99 Aligned_cols=151 Identities=15% Similarity=0.288 Sum_probs=107.8
Q ss_pred CCceEeecCCcEEEEeeeccCCCC---eEEEEeCCeeeCCC------------------CcEEe-------eCCeEEECC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIP---TISWRRENNAILPN------------------GQTIF-------TGSTLQIPR 132 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~---~~~W~~~~~~~~~~------------------~~~~~-------~~~~l~i~~ 132 (232)
+..+.+..|+++.|.|.+.+.+.+ .+.|++++...... .+... .+.+|.|.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 455778899999999999887765 38999976543210 01111 124699999
Q ss_pred CCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccE-EEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC---
Q psy15206 133 ITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPI-VTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND--- 208 (232)
Q Consensus 133 ~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~--- 208 (232)
++.+|.|.|.|.+.+..+........+.+..++. .........+..|+.+.+.|.+.|.|.|.|.|++++..+...
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~ 165 (218)
T 4frw_A 86 AVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSF 165 (218)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEE
T ss_pred ccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceE
Confidence 9999999999999876554344444444544333 333344556667899999999999999999999998655321
Q ss_pred ---C----eEEEEEeccccCCceEEEEecC
Q psy15206 209 ---E----YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ---~----~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
. ...|.+..+...|+|.|+|.|+
T Consensus 166 ~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~ 195 (218)
T 4frw_A 166 KHSRSAAVTSEFHLVPSRSMNGQPLTCVVS 195 (218)
T ss_dssp ECSSSEEEEEEEEECCCGGGTTCEEEEEEE
T ss_pred ecCCcEEEEEEEEEeeCCHHhCeEEEEEEE
Confidence 1 2357777888899999999984
No 150
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.84 E-value=5.9e-20 Score=136.33 Aligned_cols=147 Identities=11% Similarity=0.154 Sum_probs=113.0
Q ss_pred CceEeecCCcEEEEeeec-cCCCCeEEEEeCCeeeCCCCcEEeeC----CeEEECCCCCCCCeEEEEEeEeCCCCceeeE
Q psy15206 82 QLSVAKEGQSVQLECHAE-GHPIPTISWRRENNAILPNGQTIFTG----STLQIPRITKEDRGAYYCVAQNGIGRGARRK 156 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~----~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~ 156 (232)
....+.+|+.+.|.|... +.|.+.+.|++++..+....+..... ..|.|.++..+|.|.|+|.+.+..|... .
T Consensus 9 ~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~--s 86 (312)
T 2y23_A 9 VVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS--S 86 (312)
T ss_dssp CEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE--E
T ss_pred eeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE--E
Confidence 345677899988888865 47788999999999887555544322 5899999999999999999998776433 3
Q ss_pred EEEEEEe------------ccEEEeccc-eeeeeccCeEEEEEEee-cCCCCeEEEeeCCEEecCCCe-----------E
Q psy15206 157 IEVKVEF------------APIVTVQST-RIGQALHHDMDLDCHIE-AYPHPILYWAKDGEIVVNDEY-----------H 211 (232)
Q Consensus 157 ~~l~v~~------------~p~~~~~~~-~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~g~~~~~~~~-----------~ 211 (232)
..+.+.. +|.+...+. ...+..|+.+.|.|.+. +.|.+.+.|+++|..+....+ .
T Consensus 87 ~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~ 166 (312)
T 2y23_A 87 YLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGII 166 (312)
T ss_dssp EEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEE
T ss_pred EEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEE
Confidence 4444432 555444333 66788999999999998 899999999999988865443 3
Q ss_pred EEEEeccccCCceEEEEec
Q psy15206 212 SISNFGTSEGTTGSLQCKV 230 (232)
Q Consensus 212 ~~~~~~~~~~d~g~Y~C~~ 230 (232)
.|.+.++...|+|.|+|.+
T Consensus 167 ~L~i~~~~~~d~G~Y~C~~ 185 (312)
T 2y23_A 167 EMFMEKLQDEDEGTYTFQL 185 (312)
T ss_dssp EEEESCCCGGGCEEEEEEE
T ss_pred EEEEccCCcccCEeEEEEE
Confidence 3777788889999999965
No 151
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=4.7e-22 Score=149.14 Aligned_cols=149 Identities=22% Similarity=0.423 Sum_probs=50.4
Q ss_pred CCceEeecCCcEEEEeeeccC-CCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGH-PIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEV 159 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 159 (232)
+....+.+|+.+.|.|.+.+. |.+.+.|++++..+....+....++.|.|.+++.+|.|.|+|.+.+. +. ....+.+
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~-~~~~~~l 92 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QR-VLCHFSV 92 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-Ce-EEEEEEE
Confidence 566778899999999999876 56789999999887655555556678999999999999999999987 43 4455566
Q ss_pred EEEeccE----------------------EEe----ccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC-----
Q psy15206 160 KVEFAPI----------------------VTV----QSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND----- 208 (232)
Q Consensus 160 ~v~~~p~----------------------~~~----~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~----- 208 (232)
.|...|. +.. ......+..|+.+.|.|.+.|.|.+.+.|+++|..+...
T Consensus 93 ~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~ 172 (334)
T 1ry7_B 93 RVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGG 172 (334)
T ss_dssp --------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTC
T ss_pred EEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccc
Confidence 6654332 111 112346778999999999999999999999999876533
Q ss_pred -----CeEEEEEeccccCCceEEEEecC
Q psy15206 209 -----EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 -----~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
....|.+.++...|+|.|+|.|.
T Consensus 173 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 200 (334)
T 1ry7_B 173 IKLRHQQWSLVMESVVPSDRGNYTCVVE 200 (334)
T ss_dssp CCCCTTTTEEEECSCCGGGCCCEEEEEE
T ss_pred eecccceEEEEECCCCcccCEEEEEEEE
Confidence 23478888899999999999874
No 152
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.84 E-value=8.4e-20 Score=137.73 Aligned_cols=150 Identities=15% Similarity=0.147 Sum_probs=113.8
Q ss_pred CCceEeecCCcEEEEeeeccCCC-----------CeEEEEeCCee------eC---CCCcEEeeCCeEEECCCCCCCCeE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPI-----------PTISWRRENNA------IL---PNGQTIFTGSTLQIPRITKEDRGA 140 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~-----------~~~~W~~~~~~------~~---~~~~~~~~~~~l~i~~~~~~~~g~ 140 (232)
.....+.+|+.+.|.|.+.+.|. +.+.|++++.. +. ...+....++.|.|.++..+|+|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 45567889999999999987654 88999998842 11 122344557789999999999999
Q ss_pred EEEEeEeCCCCceeeEEEEEEEeccEEEe----ccceeeeeccCeEEEEEEe-----ecCCCCeEEEeeCCEEecCCCe-
Q psy15206 141 YYCVAQNGIGRGARRKIEVKVEFAPIVTV----QSTRIGQALHHDMDLDCHI-----EAYPHPILYWAKDGEIVVNDEY- 210 (232)
Q Consensus 141 y~C~~~~~~~~~~~~~~~l~v~~~p~~~~----~~~~~~~~~g~~~~l~C~~-----~~~p~~~~~W~~~g~~~~~~~~- 210 (232)
|+|.+.+..+. ....+.+.|..+|.... .+....+..|+.+.|.|.+ .|.|.+.+.|+|+|..+....+
T Consensus 94 Y~C~a~n~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~ 172 (349)
T 4dep_C 94 YTCMLRNTTYC-SKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNV 172 (349)
T ss_dssp EEEEEECSSCE-EEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSE
T ss_pred EEEEEecCCce-EEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccce
Confidence 99999997665 44566777776543221 1334466789999999985 7789999999999998865322
Q ss_pred ----EEEEEeccccCCceEEEEecC
Q psy15206 211 ----HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 211 ----~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..|.+.++...|+|.|+|.|.
T Consensus 173 ~~~~~~L~i~~v~~~d~G~Y~C~a~ 197 (349)
T 4dep_C 173 IPEGMNLSFLIALISNNGNYTCVVT 197 (349)
T ss_dssp EEETTEEEEESCCGGGCEEEEEEEE
T ss_pred eecCCEEEEeeeeecCCcEEEEEEE
Confidence 357778888999999999874
No 153
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.84 E-value=2.2e-19 Score=125.36 Aligned_cols=149 Identities=19% Similarity=0.340 Sum_probs=111.6
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCe-EEEEeCcEee-----------------eeEEEEeee----ecCc
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPT-ISWRRNFKRL-----------------GRLHLAIPY----TSPE 67 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~-~~W~~~~~~~-----------------~~~~~~~~~----~~~~ 67 (232)
..+|.|... +....+.+|++++|.|.+.+.|.+. +.|++++..+ |.|.|.... ..+.
T Consensus 5 ~p~p~i~~~-p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~~ 83 (204)
T 3sgj_C 5 LPKAVVFLE-PQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTQLSTLSDPVQ 83 (204)
T ss_dssp -CBCEEEEE-SCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCSSEEEESSCCGGGCEEEEEEETTSBCCCCEE
T ss_pred CCCCeEEEc-CCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCccEEEEecccccCCEEEEEEeCCCcccccEE
Confidence 457888888 7778899999999999999877654 9999965433 577777632 2566
Q ss_pred eeecCCcEEecCCCCceEeecCCcEEEEeeeccC-CCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeE
Q psy15206 68 AQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGH-PIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 68 l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
|.|..++..... +. ..+.+|+.+.|.|.+.+. +.+.+.|++++..+. .....+.|.|.++..+|.|.|+|.+.
T Consensus 84 l~V~~~p~~~~~-~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~a~ 157 (204)
T 3sgj_C 84 LEVHIGWLLLQA-PR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRK----YFHHNSDFYIPKATLKDSGSYFCRGL 157 (204)
T ss_dssp EEEECSSEEEEC-SC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEE----EEEECCCEEESSCCGGGCEEEEEEEE
T ss_pred EEEecCceEecC-Cc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEee----cccCCceEEECcCCcccCEEEEEEEE
Confidence 777767665542 22 567789999999999665 557899999998752 23346789999999999999999999
Q ss_pred eCCCCceeeEEEEEEEecc
Q psy15206 147 NGIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p 165 (232)
|..+...+..+.+.|..+|
T Consensus 158 n~~~~~~s~~~~l~V~~~~ 176 (204)
T 3sgj_C 158 VGSKNVSSETVQITITQGL 176 (204)
T ss_dssp ETTEEEECCCEEEEEEC--
T ss_pred eCCCceecCcEEEEEeCcC
Confidence 9654445667777777544
No 154
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.84 E-value=5.9e-20 Score=132.33 Aligned_cols=152 Identities=15% Similarity=0.225 Sum_probs=105.9
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCee-----e---------CCCCcEEee----CCeEEECCCCCCCCeEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNA-----I---------LPNGQTIFT----GSTLQIPRITKEDRGAY 141 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~-----~---------~~~~~~~~~----~~~l~i~~~~~~~~g~y 141 (232)
.+....+.+|+.+.|.|.+.+.+.+.+.|++.... + ....++... ..+|.|.++..+|+|.|
T Consensus 10 ~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 89 (250)
T 3esu_F 10 STSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTY 89 (250)
T ss_dssp SCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred cCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEE
Confidence 45556788999999999999988889999985310 0 011222111 12799999999999999
Q ss_pred EEEeEeCCCCceeeEEEEEEEec-------------------cEEEeccceeeeeccCeEEEEEEeecCC--CCeEEEee
Q psy15206 142 YCVAQNGIGRGARRKIEVKVEFA-------------------PIVTVQSTRIGQALHHDMDLDCHIEAYP--HPILYWAK 200 (232)
Q Consensus 142 ~C~~~~~~~~~~~~~~~l~v~~~-------------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~ 200 (232)
.|.+.+..+........+.|..+ +.+...+....+..|++++|.|.+.+.+ .+.+.|+|
T Consensus 90 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k 169 (250)
T 3esu_F 90 FCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVK 169 (250)
T ss_dssp EEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEE
T ss_pred EEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEE
Confidence 99998865432333345555442 2233445566788999999999998877 67899999
Q ss_pred C--CEEe----------------------------cCCCeEEEEEeccccCCceEEEEecC
Q psy15206 201 D--GEIV----------------------------VNDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 201 ~--g~~~----------------------------~~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+ |..+ .....+.|.+.++..+|+|.|.|.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 230 (250)
T 3esu_F 170 QRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARS 230 (250)
T ss_dssp ECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred ECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEe
Confidence 7 3221 01234468888899999999999985
No 155
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.84 E-value=1.4e-19 Score=127.55 Aligned_cols=145 Identities=26% Similarity=0.457 Sum_probs=108.8
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe-------------------------------eeeE
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR-------------------------------LGRL 57 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~-------------------------------~~~~ 57 (232)
...+|.|+.. +.++.+.+|++++|.|.+.+.|.+.+.|++++.. .|.|
T Consensus 6 ~~~~P~i~~~-p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 6 QYQSPRIIEH-PTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCCCCEEEEC-CCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEE
T ss_pred ccCCCEEecC-CCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceE
Confidence 3568999988 8889999999999999999989999999994332 2467
Q ss_pred EEEeeee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCeeeCC--------CCcE
Q psy15206 58 HLAIPYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENNAILP--------NGQT 121 (232)
Q Consensus 58 ~~~~~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~--------~~~~ 121 (232)
.|..... ...|.+...+......+....+..|+.+.|.|.+ .+.|.+.+.|++++..+.. ..+.
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~ 164 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRV 164 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSE
T ss_pred EEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcE
Confidence 7765321 3344444322222224555678889999999998 8889999999999988752 1222
Q ss_pred -EeeCCeEEECCCCCCCCeEEEEEeEeCCCCcee
Q psy15206 122 -IFTGSTLQIPRITKEDRGAYYCVAQNGIGRGAR 154 (232)
Q Consensus 122 -~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~ 154 (232)
....+.|.|.++..+|.|.|+|.+.|..|....
T Consensus 165 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 198 (217)
T 2vr9_A 165 RIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRES 198 (217)
T ss_dssp EEETTTEEEESSCCSTTCEEEEEEEEETTEEEEC
T ss_pred EecCCCcEEEeeCCHHHCeEEEEEEEcccceecc
Confidence 234568999999999999999999998876433
No 156
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.84 E-value=1e-19 Score=130.25 Aligned_cols=151 Identities=15% Similarity=0.190 Sum_probs=107.3
Q ss_pred CCceEeecCCcEEEEeeeccCC----CCeEEEEeCC--eee---C---------CCCcEEee----CCeEEECCCCCCCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP----IPTISWRREN--NAI---L---------PNGQTIFT----GSTLQIPRITKEDR 138 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~----~~~~~W~~~~--~~~---~---------~~~~~~~~----~~~l~i~~~~~~~~ 138 (232)
+....+.+|+.+.|.|.+.+.+ .+.+.|+++. ..+ . ...++... ..+|.|.+++.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (240)
T 1moe_A 8 PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDV 87 (240)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhC
Confidence 4556788999999999998887 6789999863 211 0 01222221 12799999999999
Q ss_pred eEEEEEeEeCCCCceeeEEEEEEEecc------EEEeccceeeeeccCeEEEEEEeecCCC--CeEEEeeC--CEEe---
Q psy15206 139 GAYYCVAQNGIGRGARRKIEVKVEFAP------IVTVQSTRIGQALHHDMDLDCHIEAYPH--PILYWAKD--GEIV--- 205 (232)
Q Consensus 139 g~y~C~~~~~~~~~~~~~~~l~v~~~p------~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~--g~~~--- 205 (232)
|.|.|.+.+..+........+.|..++ .+...+....+..|++++|.|.+.+.|. +.+.|+|+ |..+
T Consensus 88 G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~ 167 (240)
T 1moe_A 88 ATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWI 167 (240)
T ss_dssp EEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEE
T ss_pred EEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEE
Confidence 999999998754323344566666532 2344466667889999999999999874 58999995 2111
Q ss_pred ---c----------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 206 ---V----------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 206 ---~----------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
. ......|.+.++..+|+|.|+|.|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 218 (240)
T 1moe_A 168 GRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPF 218 (240)
T ss_dssp EEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEE
Confidence 0 1223568888899999999999985
No 157
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.84 E-value=9.7e-19 Score=120.73 Aligned_cols=147 Identities=24% Similarity=0.435 Sum_probs=109.3
Q ss_pred CCCeeecCCCcceEeec-CCeEEEEEEecCCCC--CeEEEEeCcEee----------------------eeEEEEeee--
Q psy15206 11 TPPVILNNSTQLSVAKE-GQSVQLECHAEGHPI--PTISWRRNFKRL----------------------GRLHLAIPY-- 63 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~-G~~v~l~C~~~~~p~--~~~~W~~~~~~~----------------------~~~~~~~~~-- 63 (232)
.||.|... ....+.+ |++++|.|.+.+.+. +.+.|++++..+ |.|.|....
T Consensus 2 ~~P~i~~~--~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 79 (190)
T 2wv3_A 2 NEPRIVTS--EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFVS 79 (190)
T ss_dssp -CCEEEEC--CCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCccccc--ceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeCC
Confidence 58888865 4556666 999999999998776 889999954332 577777633
Q ss_pred ---ecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEe--CCeeeC---CCCcEEeeC----CeEEEC
Q psy15206 64 ---TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRR--ENNAIL---PNGQTIFTG----STLQIP 131 (232)
Q Consensus 64 ---~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~--~~~~~~---~~~~~~~~~----~~l~i~ 131 (232)
..+.|.|..+|.+.. .+....+..|+.+.|.|.+.|.|.+.+.|++ ++..+. ...++.... +.|.|.
T Consensus 80 ~~~~~~~l~V~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~ 158 (190)
T 2wv3_A 80 APKANATIEVKAAPDITG-HKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIV 158 (190)
T ss_dssp EEEEEEEEEEECCCEEEE-ECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEEC
T ss_pred cccccEEEEEecCCcccc-cCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEE
Confidence 256677877777654 3556678899999999999999999999999 666542 222332221 379999
Q ss_pred CCC-CCCCeEEEEEeEeCCCCceeeEEEEEE
Q psy15206 132 RIT-KEDRGAYYCVAQNGIGRGARRKIEVKV 161 (232)
Q Consensus 132 ~~~-~~~~g~y~C~~~~~~~~~~~~~~~l~v 161 (232)
++. .+|.|.|+|.+.|..|. ....+.|.|
T Consensus 159 ~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l~V 188 (190)
T 2wv3_A 159 NLQITEDPGEYECNATNSIGS-ASVSTVLRV 188 (190)
T ss_dssp SCCTTTSCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred eccccCCCEEEEEEEEecCCc-ceeEEEEEE
Confidence 999 79999999999998876 445555555
No 158
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.84 E-value=8.4e-20 Score=131.28 Aligned_cols=150 Identities=17% Similarity=0.273 Sum_probs=107.1
Q ss_pred CceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eee-----------------CCCCcEEee------CCeEEECCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAI-----------------LPNGQTIFT------GSTLQIPRIT 134 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~-----------------~~~~~~~~~------~~~l~i~~~~ 134 (232)
....+.+|+++.|.|.+.+.+ .+.+.|+++. ..+ ....++... ..+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 346778999999999998876 5679999842 111 011233221 1369999999
Q ss_pred CCCCeEEEEEeEeCCCC-ceeeEEEEEEEec---------------cEEEeccceeeeeccCeEEEEEEeecCCCCeEEE
Q psy15206 135 KEDRGAYYCVAQNGIGR-GARRKIEVKVEFA---------------PIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYW 198 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~-~~~~~~~l~v~~~---------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W 198 (232)
.+|+|.|.|.+.+..+. .......|.|..+ +.+...+....+..|++++|.|.+.+.|.+.+.|
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W 169 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAW 169 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEE
Confidence 99999999999986221 1122345566533 3355556667788999999999999999889999
Q ss_pred ee--CCEEec---------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 199 AK--DGEIVV---------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 199 ~~--~g~~~~---------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+| +|..+. ....+.|.+.++..+|+|.|+|.|.
T Consensus 170 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 225 (247)
T 2ghw_B 170 YQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQR 225 (247)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEc
Confidence 99 543220 1234568888999999999999985
No 159
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.84 E-value=6e-20 Score=125.62 Aligned_cols=140 Identities=17% Similarity=0.328 Sum_probs=100.3
Q ss_pred CceEeecCCcEEEEeeecc--CCCCeEEEEe--CCeeeC----------CCCcE-EeeCCeEEECCCCCCCCeEEEEEeE
Q psy15206 82 QLSVAKEGQSVQLECHAEG--HPIPTISWRR--ENNAIL----------PNGQT-IFTGSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~--~~~~~~~W~~--~~~~~~----------~~~~~-~~~~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
..+....|+++.|.|.... .+.+.+.|++ ++..+. ...+. ...+++|.|.+++.+|+|.|.|.+.
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~ 86 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIY 86 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEE
Confidence 4456778999999996532 4456899999 876651 22333 3346789999999999999999999
Q ss_pred eCCCCce-eeEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeEEEEEeccccCC
Q psy15206 147 NGIGRGA-RRKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYHSISNFGTSEGT 222 (232)
Q Consensus 147 ~~~~~~~-~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~d 222 (232)
+..+... ...+.|.|.. .|.+.. .+..+.|.|.+.+.|.+.+.|+++|..+ ......+.+.. ...|
T Consensus 87 n~~g~~~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~~~~~i~~~~-~~~d 156 (182)
T 1hnf_A 87 DTKGKNVLEKIFDLKIQERVSKPKISW--------TCINTTLTCEVMNGTDPELNLYQDGKHL-KLSQRVITHKW-TTSL 156 (182)
T ss_dssp ETTSCEEEEEEEEEEEECCCCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEESSCEE-EEESSCEEEEC-CSCE
T ss_pred eCCCceeEEEEEEEEEcCcCCCCEEEE--------ccCcEEEEeEccCCCCCEEEEEECCEEC-CCCCcEEEEec-ccCC
Confidence 9776532 3456677764 233332 2336899999999999999999999887 32333344332 4689
Q ss_pred ceEEEEecC
Q psy15206 223 TGSLQCKVP 231 (232)
Q Consensus 223 ~g~Y~C~~~ 231 (232)
+|.|+|.|.
T Consensus 157 ~G~Y~C~a~ 165 (182)
T 1hnf_A 157 SAKFKCTAG 165 (182)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEE
Confidence 999999974
No 160
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.84 E-value=2.3e-19 Score=126.86 Aligned_cols=149 Identities=20% Similarity=0.392 Sum_probs=101.4
Q ss_pred CCceEeecCCcEEEEeeeccCCC-----CeEEEEeCCeeeC---------C------CCcEEee-------CCeEEECCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPI-----PTISWRRENNAIL---------P------NGQTIFT-------GSTLQIPRI 133 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~-----~~~~W~~~~~~~~---------~------~~~~~~~-------~~~l~i~~~ 133 (232)
.....+..|+.+.|.|.+.+.+. ..+.|++++..+. . ..+.... +.+|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 34456778999999999876553 3799999753221 0 1122211 137999999
Q ss_pred CCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeC-CEEecCC----
Q psy15206 134 TKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKD-GEIVVND---- 208 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~-g~~~~~~---- 208 (232)
+.+|.|.|+|.+.+ .+. ....+.|.|..++.............|+.+.|.|.+.|.|.|.+.|+++ |..+...
T Consensus 88 ~~~D~G~Y~C~~~~-~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~ 165 (222)
T 3sbw_C 88 KLQDAGVYRCMISY-GGA-DYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTT 165 (222)
T ss_dssp CGGGCEEEEEEEES-SSE-EEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEE
T ss_pred ccccCeEEEEEEEe-CCC-ceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceE
Confidence 99999999999998 333 5566778887665432222222556799999999999999999999998 5444321
Q ss_pred ------CeEE-EEEeccccCCceEEEEecC
Q psy15206 209 ------EYHS-ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ------~~~~-~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+. .........|.|.|+|.|.
T Consensus 166 ~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~ 195 (222)
T 3sbw_C 166 NSKREEKLFNVTSTLRINTTTNEIFYCTFR 195 (222)
T ss_dssp ECC----CEEEEEEEEEECCTTCEEEEEEE
T ss_pred EEcCCCCCEEEEEEEEEeccCCcEEEEEEE
Confidence 1122 2222345689999999974
No 161
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.84 E-value=1.7e-20 Score=136.89 Aligned_cols=212 Identities=13% Similarity=0.106 Sum_probs=92.2
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEe----CcE----------------eeeeEEEEeeee------cCceeecCC
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRR----NFK----------------RLGRLHLAIPYT------SPEAQVDTP 73 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~----~~~----------------~~~~~~~~~~~~------~~~l~v~~~ 73 (232)
|.+..|.+|++++|.|.+....+..+.|.- ... ..+.|.|..... .+.|.|..+
T Consensus 6 P~~~~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~~~y~C~~~~~~~~~~~~v~l~V~~~ 85 (291)
T 1mq8_A 6 PSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWT 85 (291)
T ss_dssp CSEEEECTTCEEEEEEEECCSSCSEEEEECSSCCCCCCCSCSSEEEEEEESCCSCCCCEEEEECSSCEEEEECEEEECBC
T ss_pred CCccEEcCCCeEEEEEeCCCCCCccceEEecCCCcccccCCCceEEEEEEecccCCeEEEEEEcCCccEEEEEEEEEecC
Confidence 677889999999999999754444578852 111 113566665332 567788777
Q ss_pred cEEecCCCCceEeecCCcEEEEeeeccC-CCC--eEEEEeCCeeeCCCCc-EEeeCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 74 PVILNNSPQLSVAKEGQSVQLECHAEGH-PIP--TISWRRENNAILPNGQ-TIFTGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 74 p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~--~~~W~~~~~~~~~~~~-~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
|......+....+.+|+.++|.|.+.+. |.. .+.|++++..+..... .......+.+.....++.+.|+|.+.+..
T Consensus 86 P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l 165 (291)
T 1mq8_A 86 PERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDL 165 (291)
T ss_dssp CSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEEC
T ss_pred CCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeeeeccCCceEEEEEEecC
Confidence 7655444443457789999999999874 433 5899999877632110 00012356666666667779999999864
Q ss_pred CC-------ceeeEEEEEEEeccEEEec-cceeeeeccCeEEEEEEeecCCCC---eEEEeeCCEEecC-----CCeEEE
Q psy15206 150 GR-------GARRKIEVKVEFAPIVTVQ-STRIGQALHHDMDLDCHIEAYPHP---ILYWAKDGEIVVN-----DEYHSI 213 (232)
Q Consensus 150 ~~-------~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~---~~~W~~~g~~~~~-----~~~~~~ 213 (232)
+. ..++...+.|.++|..... .....+.+|+.++|.|.+.|.+++ .++|+++|..+.. ++...+
T Consensus 166 ~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~~~~g~~~~~ 245 (291)
T 1mq8_A 166 RPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSA 245 (291)
T ss_dssp GGGTSCEEEECCCCEECBC-------------------------------------------------------------
T ss_pred CccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCceeeecCCeEEE
Confidence 42 1245567778777532111 112256789999999999997654 5999999987753 223332
Q ss_pred EEec-ccc--CCceEEEEecC
Q psy15206 214 SNFG-TSE--GTTGSLQCKVP 231 (232)
Q Consensus 214 ~~~~-~~~--~d~g~Y~C~~~ 231 (232)
.... ++. ++.+.|.|.++
T Consensus 246 ~~~~~~~~~~~~~~~~~C~~~ 266 (291)
T 1mq8_A 246 KASVSVTAEDEGTQRLTCAVI 266 (291)
T ss_dssp ---------------------
T ss_pred EEecceeEcCCCCEEEEEEEE
Confidence 2221 122 44667778775
No 162
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.84 E-value=1.2e-19 Score=135.77 Aligned_cols=152 Identities=21% Similarity=0.333 Sum_probs=107.1
Q ss_pred CCCceEeecCCcEEEEeeeccC-CCCeEEEEeCCeeeC---------CCCcEE---------eeCCeEEECCCCCCCCeE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGH-PIPTISWRRENNAIL---------PNGQTI---------FTGSTLQIPRITKEDRGA 140 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~~~~~~---------~~~~~~---------~~~~~l~i~~~~~~~~g~ 140 (232)
.+....+.+|+.+.|.|.+.+. |.+.+.|++++.... ...+.. .....|.|.+++.+|.|.
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 88 (327)
T 2wng_A 9 PDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGT 88 (327)
T ss_dssp CCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEE
T ss_pred CCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeE
Confidence 4667788899999999999886 778999999875321 001222 234579999999999999
Q ss_pred EEEEeEeCCCCce----eeEEEEEEEeccEE-EeccceeeeeccCeEEEEEEeecCCCC--eEEEeeCCEEecCC-----
Q psy15206 141 YYCVAQNGIGRGA----RRKIEVKVEFAPIV-TVQSTRIGQALHHDMDLDCHIEAYPHP--ILYWAKDGEIVVND----- 208 (232)
Q Consensus 141 y~C~~~~~~~~~~----~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~g~~~~~~----- 208 (232)
|+|.+.+..+... .....+.|..+|.. .+......+..|+.+.|.|.+.|.|++ .+.|+++|..+...
T Consensus 89 Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~ 168 (327)
T 2wng_A 89 YYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVD 168 (327)
T ss_dssp EEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEE
T ss_pred EEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccc
Confidence 9999998755311 13456777654431 111223567789999999999998876 89999999877532
Q ss_pred -----CeEE----EEEeccccCCceEEEEecC
Q psy15206 209 -----EYHS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 -----~~~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+. +.+......|.|.|+|.|.
T Consensus 169 ~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~ 200 (327)
T 2wng_A 169 PVGESVSYSIHSTAKVVLTREDVHSQVICEVA 200 (327)
T ss_dssp CSSCCSCEEEEEEEEEECCTTGGGCEEEEEEE
T ss_pred cccCCCceEEEEEEEEechhcCcCceEEEEEe
Confidence 2232 3334445566799999874
No 163
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.84 E-value=5.3e-20 Score=129.19 Aligned_cols=147 Identities=19% Similarity=0.252 Sum_probs=107.0
Q ss_pred ceEeecCCcEEEEeeeccCCCCeEEEEeC--CeeeC------------CCCcEEe----eCCeEEECCCCCCCCeEEEEE
Q psy15206 83 LSVAKEGQSVQLECHAEGHPIPTISWRRE--NNAIL------------PNGQTIF----TGSTLQIPRITKEDRGAYYCV 144 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~~~~~~~W~~~--~~~~~------------~~~~~~~----~~~~l~i~~~~~~~~g~y~C~ 144 (232)
...+.+|+.+.|.|.+. +.+.+.|+++ +..+. ...++.. ...+|.|.+++.+|.|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 56778999999999997 7788999984 22210 1122221 124799999999999999999
Q ss_pred eEeCCC-CceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecCC--CCeEEEeeCCEEecC----------
Q psy15206 145 AQNGIG-RGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAYP--HPILYWAKDGEIVVN---------- 207 (232)
Q Consensus 145 ~~~~~~-~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~g~~~~~---------- 207 (232)
+.+..+ ........+.|. .+|.+...+.......|+.+.|.|.+.|.+ .+.+.|+|+|..+..
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 166 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQ 166 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEC
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceEC
Confidence 999766 224445677776 677777766555555799999999998863 468999999988743
Q ss_pred -CCeE----EEEEeccccCCceEEEEecC
Q psy15206 208 -DEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 208 -~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+..+ .+.+......|+|.|+|.|.
T Consensus 167 ~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~ 195 (211)
T 3tv3_L 167 SNNKYAASSYLSLTPEQWKSHRSYSCQVT 195 (211)
T ss_dssp TTSSEEEEEEEEECHHHHHHSSCEEEEEE
T ss_pred CCCCEEEEEEEEEcHHHhCCCCeEEEEEE
Confidence 2222 35555666678999999974
No 164
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.84 E-value=5.4e-20 Score=125.55 Aligned_cols=151 Identities=21% Similarity=0.280 Sum_probs=109.8
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCC-eEEEEeCcEee-----------------eeEEEEeeee----cC
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIP-TISWRRNFKRL-----------------GRLHLAIPYT----SP 66 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~-~~~W~~~~~~~-----------------~~~~~~~~~~----~~ 66 (232)
|..+|.|... +....+.+|++++|.|.+.+.+.+ .+.|++++..+ |.|.|..... .+
T Consensus 1 v~~~P~i~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~ 79 (176)
T 1f2q_A 1 VPQKPKVSLN-PPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPV 79 (176)
T ss_dssp ---CCCCEEE-SSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCCSSEEEECSCCGGGCEEEEEECTTSSCCCCE
T ss_pred CCCCCEEEcC-CCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCCceEEEEeccceecCEEEEEEcCCccccccE
Confidence 3568899888 777889999999999999987764 79999965432 5777766322 45
Q ss_pred ceeecCCcEEecCCCCceEeecCCcEEEEeeec-cCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEe
Q psy15206 67 EAQVDTPPVILNNSPQLSVAKEGQSVQLECHAE-GHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVA 145 (232)
Q Consensus 67 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~ 145 (232)
.|.|..++..... ....+.+|+.+.|.|.+. +.|.+.+.|+++|..+... ...+.|.|.++..+|.|.|+|.+
T Consensus 80 ~l~V~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a 153 (176)
T 1f2q_A 80 YLEVFSDWLLLQA--SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW----YENHNISITNATVEDSGTYYCTG 153 (176)
T ss_dssp EEEEECSSEEEEE--SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC----CCSSEEEESSCCGGGCEEEEEEE
T ss_pred EEEEeCcceeecC--CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee----cCCCeEEECCCCcccCEEEEEEE
Confidence 5666655544432 234677999999999995 5666789999999876322 23568999999999999999999
Q ss_pred EeCCCCceeeEEEEEEEeccE
Q psy15206 146 QNGIGRGARRKIEVKVEFAPI 166 (232)
Q Consensus 146 ~~~~~~~~~~~~~l~v~~~p~ 166 (232)
.|..+...+..+.+.|..+|.
T Consensus 154 ~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 154 KVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EETTEEEECCCEEEEEECSCC
T ss_pred EeCCcceEecCEEEEEecCCC
Confidence 997554455667888877664
No 165
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.84 E-value=3.3e-21 Score=135.48 Aligned_cols=151 Identities=21% Similarity=0.357 Sum_probs=105.8
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eeeC------------CCCcEEee----CCeEEECCCCCCCCeEEE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAIL------------PNGQTIFT----GSTLQIPRITKEDRGAYY 142 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~~------------~~~~~~~~----~~~l~i~~~~~~~~g~y~ 142 (232)
+....+.+|+.+.|.|.+.+.+.+.+.|+++. ..+. ...++... ...|.|.+++.+|+|.|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 55567889999999999888777789999853 2220 01233221 237999999999999999
Q ss_pred EEeEeCCCCc--eeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecC-CC-CeEEEeeCCEEecCCCe----
Q psy15206 143 CVAQNGIGRG--ARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAY-PH-PILYWAKDGEIVVNDEY---- 210 (232)
Q Consensus 143 C~~~~~~~~~--~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~g~~~~~~~~---- 210 (232)
|.+.+..... ......+.|. .+|.+...+.......|+.+.|.|.+.|. |. +.+.|+|+|..+.....
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 165 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKP 165 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCc
Confidence 9999732211 1223345553 46677665544445679999999999887 54 68999999988753311
Q ss_pred ------EE----EEEeccccCCceEEEEecC
Q psy15206 211 ------HS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 211 ------~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
+. |.+..+..+|+|.|+|.|.
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 196 (212)
T 1nfd_E 166 SKQGQNYMTSSYLSLTADQWKSHNRVSCQVT 196 (212)
T ss_dssp BCSSSCEEEEEBCCEEHHHHHTCSCEEEEEE
T ss_pred eecCCCceEEEEEEEchhhcCCCCeEEEEEE
Confidence 22 5566777789999999984
No 166
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.84 E-value=9.9e-20 Score=128.28 Aligned_cols=151 Identities=18% Similarity=0.256 Sum_probs=103.4
Q ss_pred CCceEeecCCcEEEEeeecc-CC-CCeEEEEeCCe--ee------------CCCCcEEee----CCeEEECCCCCCCCeE
Q psy15206 81 PQLSVAKEGQSVQLECHAEG-HP-IPTISWRRENN--AI------------LPNGQTIFT----GSTLQIPRITKEDRGA 140 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~-~~-~~~~~W~~~~~--~~------------~~~~~~~~~----~~~l~i~~~~~~~~g~ 140 (232)
+....+.+|+.+.|.|.+.+ .+ .+.+.|++++. .+ ....++... ..+|.|.+++.+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 45567889999999999543 32 56899998542 11 001233221 2379999999999999
Q ss_pred EEEEeEeCCC-CceeeEEEEEEE---eccEEEeccceeeeeccCeEEEEEEeec-CCCC-eEEEeeCCEEecCC------
Q psy15206 141 YYCVAQNGIG-RGARRKIEVKVE---FAPIVTVQSTRIGQALHHDMDLDCHIEA-YPHP-ILYWAKDGEIVVND------ 208 (232)
Q Consensus 141 y~C~~~~~~~-~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~g~~~~~~------ 208 (232)
|.|.+.+..+ ........+.|. .+|.+...+.......|+.+.|.|.+.| .|.+ .|.|+|+|..+...
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 166 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT 166 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEEC
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecC
Confidence 9999998765 112223455554 4677666443333346889999999988 4554 89999999876433
Q ss_pred ------CeE----EEEEeccccCCceEEEEecC
Q psy15206 209 ------EYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ------~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.+ .|.+......|+|.|+|.|.
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~ 199 (216)
T 2xzc_L 167 EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVT 199 (216)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEE
T ss_pred cccCCCCCEEEEEEEEECHHHhCCCCcEEEEEE
Confidence 122 46666777799999999984
No 167
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.84 E-value=5.2e-19 Score=124.83 Aligned_cols=148 Identities=23% Similarity=0.381 Sum_probs=113.9
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee------------------eeEEEEeeee-------
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL------------------GRLHLAIPYT------- 64 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~------------------~~~~~~~~~~------- 64 (232)
...|+|+.. +.++.+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|.....
T Consensus 16 ~~~~~i~~~-p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~ 94 (218)
T 3k0w_A 16 PRGSKITVN-PESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQ 94 (218)
T ss_dssp ---CCEEEC-CCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCCSSEEEETTCCGGGCEEEEEEEECTTCCEECC
T ss_pred CCCCEEEEC-CCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCCCCEEEEccCChhhCeEeEEEEEcCCCCceee
Confidence 457888888 88999999999999999999999999999954432 5788876332
Q ss_pred cCceeecCC---------------cEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEE
Q psy15206 65 SPEAQVDTP---------------PVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQ 129 (232)
Q Consensus 65 ~~~l~v~~~---------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~ 129 (232)
.+.|.|... |.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.
T Consensus 95 ~~~l~V~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~-----~~~L~ 168 (218)
T 3k0w_A 95 WSQLDVCDIPESFQRSVDGVSESKLQICV-EPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET-----KKLYM 168 (218)
T ss_dssp CEEEEEECCCGGGCTTCCSBCCSSCEEEE-CCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC-----SSEEE
T ss_pred EEEEEEEccCcccccccccccCCCceEEE-CCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCC-----CCEEE
Confidence 345555443 33332 4556678889999999999999999999999998875432 35799
Q ss_pred ECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEec
Q psy15206 130 IPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFA 164 (232)
Q Consensus 130 i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~ 164 (232)
|.++...|.|.|+|.+.|..|...+..+.+.|...
T Consensus 169 i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 169 VPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC-
T ss_pred EeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCC
Confidence 99999999999999999987765666677777653
No 168
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.84 E-value=2.7e-19 Score=127.91 Aligned_cols=150 Identities=15% Similarity=0.206 Sum_probs=106.0
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eee---------------CCCCcEEee-----CCeEEECCCCCCCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAI---------------LPNGQTIFT-----GSTLQIPRITKEDR 138 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~---------------~~~~~~~~~-----~~~l~i~~~~~~~~ 138 (232)
+....+.+|+++.|.|. .+.+.+.+.|+++. ..+ ....++... ..+|.|.+++.+|+
T Consensus 7 p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~Ds 85 (238)
T 2p1y_A 7 PRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQT 85 (238)
T ss_dssp CSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGC
T ss_pred ccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccC
Confidence 55667889999999999 67788899999852 110 011222221 34799999999999
Q ss_pred eEEEEEeEeCCCC----ceeeEEEEEEEecc------------EEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCC
Q psy15206 139 GAYYCVAQNGIGR----GARRKIEVKVEFAP------------IVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDG 202 (232)
Q Consensus 139 g~y~C~~~~~~~~----~~~~~~~l~v~~~p------------~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g 202 (232)
|.|.|.+.+..+. .......+.|...+ .+...+....+..|++++|.|.+.+.|.+.+.|+|++
T Consensus 86 G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~ 165 (238)
T 2p1y_A 86 SVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQF 165 (238)
T ss_dssp EEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEEC
T ss_pred eeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEEC
Confidence 9999999986432 01123456665432 4555677778889999999999999999999999963
Q ss_pred -----EEe--------------------cCCCeEEEEEeccccCCceEEEEecC
Q psy15206 203 -----EIV--------------------VNDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 203 -----~~~--------------------~~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+ .......|.+.++..+|+|.|+|.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 219 (238)
T 2p1y_A 166 PGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAI 219 (238)
T ss_dssp TTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEE
T ss_pred CCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEe
Confidence 111 01224578888899999999999974
No 169
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.84 E-value=7.7e-19 Score=138.92 Aligned_cols=143 Identities=17% Similarity=0.255 Sum_probs=91.1
Q ss_pred cCCcEEEEeeeccC-CCC-eEEEEeCCeeeCC--C------CcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeE-
Q psy15206 88 EGQSVQLECHAEGH-PIP-TISWRRENNAILP--N------GQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRK- 156 (232)
Q Consensus 88 ~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~~~--~------~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~- 156 (232)
.++.+.|.|.+.+. |.+ .+.|++++..... . .......+.|.|.....+ .|.|+|.+.|..+......
T Consensus 149 ~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~ 227 (512)
T 1zvo_C 149 DNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIF 227 (512)
T ss_pred CCCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEe
Confidence 45789999999886 655 8999996543210 0 001111235788877777 8999999999766522211
Q ss_pred ---------EEEEEEe----------------------------------------------------ccEEEec-ccee
Q psy15206 157 ---------IEVKVEF----------------------------------------------------APIVTVQ-STRI 174 (232)
Q Consensus 157 ---------~~l~v~~----------------------------------------------------~p~~~~~-~~~~ 174 (232)
..+.+.. +|.+.+. +...
T Consensus 228 ~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~ 307 (512)
T 1zvo_C 228 RWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQ 307 (512)
T ss_pred cCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChH
Confidence 1222221 2344332 3333
Q ss_pred eeeccCeEEEEEEeecCCCC--eEEEeeCCEEecC-----------CCeE----EEEEeccccCCceEEEEecC
Q psy15206 175 GQALHHDMDLDCHIEAYPHP--ILYWAKDGEIVVN-----------DEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 175 ~~~~g~~~~l~C~~~~~p~~--~~~W~~~g~~~~~-----------~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+..|+.+.|.|.+.|++++ .|.|+|+|..+.. ++.| .|.+......|.|.|+|.|.
T Consensus 308 ~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~ 381 (512)
T 1zvo_C 308 DLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLN 381 (512)
T ss_pred HhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEE
Confidence 45579999999999987443 7999999976541 1222 35555666689999999974
No 170
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.84 E-value=1.7e-20 Score=140.98 Aligned_cols=157 Identities=18% Similarity=0.214 Sum_probs=121.3
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeec-------cCCCCeEEEEeCCeee--CC--CCcEEeeCCeEEECCCCCCCCeEE
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAE-------GHPIPTISWRRENNAI--LP--NGQTIFTGSTLQIPRITKEDRGAY 141 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~-------~~~~~~~~W~~~~~~~--~~--~~~~~~~~~~l~i~~~~~~~~g~y 141 (232)
.|.+.. .+....+.+|+.+.|.|.+. +.+.+.+.|++++..+ .. ..+....++.|.|.++..+|.|.|
T Consensus 18 ~p~~~~-~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 96 (339)
T 3o4o_C 18 CRFRGR-HYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTY 96 (339)
T ss_dssp CEEEEE-CSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEE
T ss_pred hHhhCc-CceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEE
Confidence 344443 56778889999999999997 7888899999998773 22 224455678999999999999999
Q ss_pred EEEeEeCCCCceeeEEEEEEEeccEEE--eccceeeeeccCeEEEEEE-----eecCCCCeEEEeeCCEEecCC-C----
Q psy15206 142 YCVAQNGIGRGARRKIEVKVEFAPIVT--VQSTRIGQALHHDMDLDCH-----IEAYPHPILYWAKDGEIVVND-E---- 209 (232)
Q Consensus 142 ~C~~~~~~~~~~~~~~~l~v~~~p~~~--~~~~~~~~~~g~~~~l~C~-----~~~~p~~~~~W~~~g~~~~~~-~---- 209 (232)
+|.+.+..+. ....+.+.|..++... .......+..|+.+.|.|. +.|.|.+.+.|+|+|..+... .
T Consensus 97 ~C~~~n~~g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~ 175 (339)
T 3o4o_C 97 VCTTRNASYC-DKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLS 175 (339)
T ss_dssp ECCEEETTEE-EEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEE
T ss_pred EEEEECCcce-EEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEE
Confidence 9999997764 5566777777654321 1122346778999999999 788999999999999877643 2
Q ss_pred ---eEEEEEeccccCCceEEEEecC
Q psy15206 210 ---YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 210 ---~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
...|.+.++...|+|.|+|.|.
T Consensus 176 ~~~~~~L~i~~v~~~d~G~Y~C~a~ 200 (339)
T 3o4o_C 176 VRGTTHLLVHDVALEDAGYYRCVLT 200 (339)
T ss_dssp CTTSSEEEESSCCGGGCEEEEEEEE
T ss_pred cCCcceEEEcccCHhhCeEEEEEEE
Confidence 2367788888999999999873
No 171
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.83 E-value=3.1e-19 Score=122.99 Aligned_cols=148 Identities=24% Similarity=0.431 Sum_probs=110.9
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe--------------------------eeeEEEEeeee-
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR--------------------------LGRLHLAIPYT- 64 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~--------------------------~~~~~~~~~~~- 64 (232)
+|.|... +.+..+.+|++++|.|.+.+.|.+.+.|++++.. .|.|.|.....
T Consensus 2 ~~~~~~~-~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 80 (189)
T 2v5t_A 2 MLTFREV-VSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEA 80 (189)
T ss_dssp CCEEEEC-CSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETT
T ss_pred Cceeecc-CCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcC
Confidence 6888888 8889999999999999999989999999994322 24677765322
Q ss_pred -------cCceeecCCcEEecCCCC-ceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe--eCCeEEECCCC
Q psy15206 65 -------SPEAQVDTPPVILNNSPQ-LSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF--TGSTLQIPRIT 134 (232)
Q Consensus 65 -------~~~l~v~~~p~~~~~~~~-~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~--~~~~l~i~~~~ 134 (232)
.+.+.+..+|.+...... ...+..|+.+.|.|.+.+.|.+.+.|++++..+........ ..+.|.|.++.
T Consensus 81 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~ 160 (189)
T 2v5t_A 81 RGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNII 160 (189)
T ss_dssp TTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCC
T ss_pred CCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCC
Confidence 344555555555432222 34566799999999999999899999999988765554433 24689999999
Q ss_pred CCCCeEEEEEeEeCCCCceeeEEEEEE
Q psy15206 135 KEDRGAYYCVAQNGIGRGARRKIEVKV 161 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~~~~~~~~l~v 161 (232)
.+|.|.|+|.+.|..|. ....+.+.|
T Consensus 161 ~~d~G~Y~C~a~n~~g~-~~~~~~l~V 186 (189)
T 2v5t_A 161 NSDGGPYVCRATNKAGE-DEKQAFLQV 186 (189)
T ss_dssp GGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred hhhCeeEEEEEEeCCCc-eeEEEEEEE
Confidence 99999999999998776 444555554
No 172
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.83 E-value=2.9e-19 Score=128.53 Aligned_cols=150 Identities=17% Similarity=0.254 Sum_probs=101.5
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCe-----EEEEeCCeeeCC---------C------CcEE-------eeCCeEEECC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPT-----ISWRRENNAILP---------N------GQTI-------FTGSTLQIPR 132 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~-----~~W~~~~~~~~~---------~------~~~~-------~~~~~l~i~~ 132 (232)
.+....+..|+.+.|.|.+.+.+.+. +.|++++..... . .+.. ..+.+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 45556788999999999998877664 999986432110 0 0000 0123599999
Q ss_pred CCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeec-CCCC-eEEEeeCCEEe-----
Q psy15206 133 ITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEA-YPHP-ILYWAKDGEIV----- 205 (232)
Q Consensus 133 ~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~g~~~----- 205 (232)
++.+|.|.|+|.+.+..+. ....+.|.|..+|.+...+.. ....|+.+.|.|.+.| .|.+ .+.|+++|..+
T Consensus 89 v~~~D~G~Y~C~~~~~~~~-~~~~~~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~ 166 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLK-AQGTVQLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIE 166 (248)
T ss_dssp CCGGGCEEEEEEEEETTEE-EEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEE
T ss_pred CCHHHCeEEEEEEEeCCcc-ceeEEEEEEecCCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccc
Confidence 9999999999999987654 556788888888988776553 3446778889999998 7888 99999998421
Q ss_pred -----------c-CCCeE----EEEEeccccCCceEEEEecC
Q psy15206 206 -----------V-NDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 206 -----------~-~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
. .+..+ .+.+......|.|.|+|.|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~ 208 (248)
T 3pv7_A 167 ISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVR 208 (248)
T ss_dssp ECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEE
T ss_pred cccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEE
Confidence 1 22223 34444556688899999984
No 173
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.83 E-value=9.9e-20 Score=131.32 Aligned_cols=151 Identities=17% Similarity=0.282 Sum_probs=105.4
Q ss_pred CCceEeecCCcEEEEeeeccCC-----CCeEEEEeCCe--ee------------CCCCcEEee----CCeEEECCCCCCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP-----IPTISWRRENN--AI------------LPNGQTIFT----GSTLQIPRITKED 137 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~-----~~~~~W~~~~~--~~------------~~~~~~~~~----~~~l~i~~~~~~~ 137 (232)
+....+.+|+++.|.|.+.+.+ .+.+.|++++. .+ ....++... ..+|.|.+++.+|
T Consensus 41 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 120 (252)
T 3bkj_L 41 PLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAED 120 (252)
T ss_dssp CSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCccc
Confidence 5556788999999999998877 57899998641 10 001232221 1279999999999
Q ss_pred CeEEEEEeEeCCCCceeeEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEEecCC----
Q psy15206 138 RGAYYCVAQNGIGRGARRKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEIVVND---- 208 (232)
Q Consensus 138 ~g~y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~~~~~---- 208 (232)
.|.|.|.+.+..+........+.|.. +|.+...+.......|+.++|.|.+.|. |.+ .+.|+|+|..+...
T Consensus 121 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 200 (252)
T 3bkj_L 121 LGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNS 200 (252)
T ss_dssp CEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEE
T ss_pred CEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeee
Confidence 99999999876543222334555543 5777665444344579999999999884 443 79999999876432
Q ss_pred --------CeE----EEEEeccccCCceEEEEecC
Q psy15206 209 --------EYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 --------~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.+ .+.+..+...|+|.|+|.|.
T Consensus 201 ~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~ 235 (252)
T 3bkj_L 201 WTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAT 235 (252)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEE
T ss_pred cCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEE
Confidence 122 35666777789999999984
No 174
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.83 E-value=6.2e-20 Score=136.67 Aligned_cols=158 Identities=15% Similarity=0.203 Sum_probs=111.8
Q ss_pred eecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 69 QVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 69 ~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
.+..+|.+.. .+. ..+.+|+.+.|.|.+.+. .+.+.|++++..+............|.|.++..+|.|.|.|.+.+.
T Consensus 20 ~~~~~P~i~~-~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 96 (316)
T 3vh8_G 20 GGQDKPFLSA-WPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHP 96 (316)
T ss_dssp ----CCEEEE-ESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCS
T ss_pred CCCCCCEeec-cCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcC
Confidence 3344555543 333 467799999999999887 6789999998765332112224568999999999999999998753
Q ss_pred CC----CceeeEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC----------CCeE
Q psy15206 149 IG----RGARRKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN----------DEYH 211 (232)
Q Consensus 149 ~~----~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~----------~~~~ 211 (232)
.+ ...+..+.+.|.. +|.+...+... +..|+.++|.|.+. .+.+.+.|+|+|..+.. ....
T Consensus 97 ~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~ 174 (316)
T 3vh8_G 97 HSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKA 174 (316)
T ss_dssp SSSSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEEEE
T ss_pred CCCcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCceE
Confidence 21 1234556666653 45666555544 77899999999994 45678999999875531 2345
Q ss_pred EEEEeccccCCceEEEEecC
Q psy15206 212 SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 212 ~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|.+.++...|+|.|+|.|.
T Consensus 175 ~L~i~~v~~~D~G~Y~C~a~ 194 (316)
T 3vh8_G 175 NFSIGPMMLALAGTYRCYGS 194 (316)
T ss_dssp EEEECSCCGGGCEEEEEEEE
T ss_pred EEEECCCChhhCceEEEEEe
Confidence 67888889999999999874
No 175
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.83 E-value=2.6e-19 Score=128.40 Aligned_cols=152 Identities=15% Similarity=0.174 Sum_probs=104.2
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCe--e---eC---------CCCcEEee----CCeEEECCCCCCCCeEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENN--A---IL---------PNGQTIFT----GSTLQIPRITKEDRGAY 141 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~---~~---------~~~~~~~~----~~~l~i~~~~~~~~g~y 141 (232)
.+....+.+|+++.|.|.+.+.+.+.+.|+++.. . +. ...++... ..+|.|.+++.+|+|.|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (242)
T 2znx_A 7 SPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMY 86 (242)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred cCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEE
Confidence 3455678899999999999988888999998531 1 10 11233221 23799999999999999
Q ss_pred EEEeEeCCCCceeeEEEEEEEeccE-------------EEeccceeeeeccCeEEEEEEeecCC--CCeEEEeeC--CEE
Q psy15206 142 YCVAQNGIGRGARRKIEVKVEFAPI-------------VTVQSTRIGQALHHDMDLDCHIEAYP--HPILYWAKD--GEI 204 (232)
Q Consensus 142 ~C~~~~~~~~~~~~~~~l~v~~~p~-------------~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~--g~~ 204 (232)
.|.+.+..+........|.|..+|. ....+....+..|++++|.|.+.+.+ .+.+.|+|+ |..
T Consensus 87 ~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~ 166 (242)
T 2znx_A 87 FCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNR 166 (242)
T ss_dssp EEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSC
T ss_pred EEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCC
Confidence 9999986433222344666655442 22333344578999999999999876 468999984 221
Q ss_pred ec---------------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 205 VV---------------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 205 ~~---------------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+. ....+.|.+.++..+|+|.|+|.|.
T Consensus 167 ~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 220 (242)
T 2znx_A 167 LEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANX 220 (242)
T ss_dssp EEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEET
T ss_pred cEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEecc
Confidence 10 1123577888889999999999985
No 176
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.83 E-value=1e-19 Score=129.14 Aligned_cols=147 Identities=18% Similarity=0.319 Sum_probs=94.9
Q ss_pred CceEeecCCcEEEEeeeccCCCC---eEEEEeCCeeeC-----------C------CCcEEe-------eCCeEEECCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGHPIP---TISWRRENNAIL-----------P------NGQTIF-------TGSTLQIPRIT 134 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~~~---~~~W~~~~~~~~-----------~------~~~~~~-------~~~~l~i~~~~ 134 (232)
..+.+.+|+++.|.|.+.+.+.+ .+.|++++.... . ..+... .+.+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 34677899999999998765443 599998764210 0 011111 12379999999
Q ss_pred CCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeec-CCCCeEEEeeCCEEe-c------
Q psy15206 135 KEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEA-YPHPILYWAKDGEIV-V------ 206 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~g~~~-~------ 206 (232)
.+|.|.|.|.+.+..+. ... .+.+...+.....+....+..|+.+.|.|.+.| .|.|.|.|++++..+ .
T Consensus 92 ~~D~G~Y~C~a~n~~~~-~~~--~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~ 168 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFY-EKA--LVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPV 168 (226)
T ss_dssp GGGCEEEEEEEEETTEE-EEE--EEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCC
T ss_pred hHHCeeEEEEEECCCcE-EEE--EEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEE
Confidence 99999999999997654 333 333433333333344456778999999999988 599999999965332 2
Q ss_pred ---CCCeEE-EEEeccccCCceEEEEecC
Q psy15206 207 ---NDEYHS-ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 ---~~~~~~-~~~~~~~~~d~g~Y~C~~~ 231 (232)
.++.+. +++..+...|+|+|+|.|+
T Consensus 169 ~~~~~g~~~v~s~l~v~~~d~G~YtC~a~ 197 (226)
T 4f80_A 169 VADGVGLYAVAASVIMRGSSGEGVSCTIR 197 (226)
T ss_dssp EECTTSCEEEEEEEEECC----CEEEEEE
T ss_pred EECCCCcEEEEEEEEechhcCcEEEEEEE
Confidence 122232 3344567789999999874
No 177
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.83 E-value=2.3e-19 Score=125.00 Aligned_cols=144 Identities=19% Similarity=0.344 Sum_probs=101.8
Q ss_pred eEeecCCcEEEEeeecc----CCCCeEEEEeCCeeeCC------------CCcEE--e-eCCeEEECCCCCCCCeEEEEE
Q psy15206 84 SVAKEGQSVQLECHAEG----HPIPTISWRRENNAILP------------NGQTI--F-TGSTLQIPRITKEDRGAYYCV 144 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~----~~~~~~~W~~~~~~~~~------------~~~~~--~-~~~~l~i~~~~~~~~g~y~C~ 144 (232)
+.+..|+.+.|.|.+.+ .+.+.+.|++++..+.. ..+.. . .+.+|.|.+++.+|.|.|.|.
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 83 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECV 83 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEE
Confidence 56778999999999853 35578999999876520 11111 1 245899999999999999999
Q ss_pred eEeCCCCce----eeEEEEEEEec---cEEEeccceeeeeccCeEEEEEEe-ecCCCCeEEEeeCCEEecCC--------
Q psy15206 145 AQNGIGRGA----RRKIEVKVEFA---PIVTVQSTRIGQALHHDMDLDCHI-EAYPHPILYWAKDGEIVVND-------- 208 (232)
Q Consensus 145 ~~~~~~~~~----~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~g~~~~~~-------- 208 (232)
+.+..+... ...+.|.|..+ |.+... ....|+.+.|.|.+ .|.|.|.+.|+++|..+...
T Consensus 84 ~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~ 159 (201)
T 1dr9_A 84 VLKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDP 159 (201)
T ss_dssp EEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECT
T ss_pred EEcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecC
Confidence 999765433 35666777654 443332 12458899999999 49999999999999876532
Q ss_pred --CeEEE-EEeccccCCceEEEEecC
Q psy15206 209 --EYHSI-SNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 --~~~~~-~~~~~~~~d~g~Y~C~~~ 231 (232)
..+.+ ........|.|.|+|.|.
T Consensus 160 ~~~~~~~~~~~~v~~~d~g~Y~C~a~ 185 (201)
T 1dr9_A 160 ETELYAVSSKLDFNMTTNHSFMCLIK 185 (201)
T ss_dssp TTCCEEEEEEEEEETTSCEEEEEEEE
T ss_pred CCcEEEEEEEEEEEecCCCEEEEEEe
Confidence 22222 223344579999999974
No 178
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.83 E-value=6.3e-21 Score=135.97 Aligned_cols=151 Identities=15% Similarity=0.264 Sum_probs=87.3
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCCe--ee---C---------CCCcE----EeeCCeEEECCCCCCCCeEEE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRRENN--AI---L---------PNGQT----IFTGSTLQIPRITKEDRGAYY 142 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~~---~---------~~~~~----~~~~~~l~i~~~~~~~~g~y~ 142 (232)
+....+.+|+++.|.|.+.+.+.+.+.|++++. .+ . ...++ .....+|.|.+++.+|.|.|.
T Consensus 30 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 109 (233)
T 3bqu_C 30 PASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYY 109 (233)
T ss_dssp CSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEE
T ss_pred CCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEE
Confidence 455667789999999999887777899998542 11 0 01111 112237999999999999999
Q ss_pred EEeEeCCCCceeeEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecCCCC--eEEEeeCCEEecCC---------
Q psy15206 143 CVAQNGIGRGARRKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHP--ILYWAKDGEIVVND--------- 208 (232)
Q Consensus 143 C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~g~~~~~~--------- 208 (232)
|.+.+..+........+.|.. +|.+...+.......|++++|.|.+.|.+++ .+.|+|+|..+..+
T Consensus 110 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 189 (233)
T 3bqu_C 110 CLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQD 189 (233)
T ss_dssp EEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCC
T ss_pred EEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCcc
Confidence 999876543222223444443 6777665444344579999999999885443 79999998765432
Q ss_pred ---CeE----EEEEeccccCCceEEEEecC
Q psy15206 209 ---EYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 ---~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+ .+.+......|+|.|+|.|.
T Consensus 190 ~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 219 (233)
T 3bqu_C 190 SKDSTYSMSSTLTLTKDEYERHNSYTCEAT 219 (233)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCCEEEEEE
T ss_pred CCCCCEEEEEEEEECHHHhCCCCCEEEEEE
Confidence 112 35556666689999999974
No 179
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.83 E-value=1.3e-18 Score=137.53 Aligned_cols=143 Identities=13% Similarity=0.178 Sum_probs=94.3
Q ss_pred eecCCcEEEEeeeccCCC--CeEEEEeCCeeeCCCC---c-------EEeeCCeEEECCCCCCCCeEEEEEeEeCCCCce
Q psy15206 86 AKEGQSVQLECHAEGHPI--PTISWRRENNAILPNG---Q-------TIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGA 153 (232)
Q Consensus 86 ~~~g~~~~l~C~~~~~~~--~~~~W~~~~~~~~~~~---~-------~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~ 153 (232)
+..|+.+.|.|.+.|..+ ..+.|+++|..+.... . .....+.|.|..+...|.|.|+|.+.|..+...
T Consensus 309 ~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~ 388 (512)
T 1zvo_C 309 LWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ 388 (512)
T ss_pred hccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC
Confidence 446999999999988533 3799999998754110 0 011124588999999999999999999765422
Q ss_pred eeEEEEEE----EeccEEEeccceeeeeccCeEE-EEEEeecCCCC--eEEEeeCCEEecCC------------Ce-EE-
Q psy15206 154 RRKIEVKV----EFAPIVTVQSTRIGQALHHDMD-LDCHIEAYPHP--ILYWAKDGEIVVND------------EY-HS- 212 (232)
Q Consensus 154 ~~~~~l~v----~~~p~~~~~~~~~~~~~g~~~~-l~C~~~~~p~~--~~~W~~~g~~~~~~------------~~-~~- 212 (232)
.+.+.... ..+|.+...+... .|+.+. |.|.+.|++++ .+.|+|||..+..+ .. |.
T Consensus 389 ~~~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~ 465 (512)
T 1zvo_C 389 RLMALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWA 465 (512)
T ss_pred ceeEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEE
Confidence 22222211 2456665544322 788899 99999996554 58999999876432 11 22
Q ss_pred ---EEEeccccCCceEEEEecC
Q psy15206 213 ---ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 213 ---~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.+......|.|.|+|.|.
T Consensus 466 ~s~L~v~~~~~~~~g~YtC~v~ 487 (512)
T 1zvo_C 466 WSVLRVPAPPSPQPATYTCVVS 487 (512)
T ss_pred EEEEEECchhcCCCCeEEEEEE
Confidence 2223333456999999974
No 180
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=1.3e-19 Score=130.69 Aligned_cols=143 Identities=13% Similarity=0.162 Sum_probs=103.3
Q ss_pred eEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCc-----EEeeCCeEEECCCCCCCCeEEEEEeEeCC----CCcee
Q psy15206 84 SVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQ-----TIFTGSTLQIPRITKEDRGAYYCVAQNGI----GRGAR 154 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~-----~~~~~~~l~i~~~~~~~~g~y~C~~~~~~----~~~~~ 154 (232)
..+.+|+++.|.|.+.+ +.+.+.|+|++..+..... .......|.|.+++.+|+|.|+|.+.+.. ....+
T Consensus 16 ~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S 94 (257)
T 1b6u_A 16 PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPS 94 (257)
T ss_dssp SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCC
T ss_pred CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccccccC
Confidence 56779999999999864 4568999998864321100 01123579999999999999999997532 12234
Q ss_pred eEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC----------CCeEEEEEeccccC
Q psy15206 155 RKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN----------DEYHSISNFGTSEG 221 (232)
Q Consensus 155 ~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~----------~~~~~~~~~~~~~~ 221 (232)
..+.+.|.. +|.+...+. ..+..|++++|.|.+.+.+ +.|.|+|+|..+.. .....+.+.+++
T Consensus 95 ~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~-- 170 (257)
T 1b6u_A 95 DPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT-- 170 (257)
T ss_dssp CCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--
T ss_pred CCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCceeEEEEecccc--
Confidence 566777764 466666554 3578999999999998764 68999999865431 124566777776
Q ss_pred CceEEEEecC
Q psy15206 222 TTGSLQCKVP 231 (232)
Q Consensus 222 d~g~Y~C~~~ 231 (232)
|+|.|+|.+.
T Consensus 171 D~G~Y~C~a~ 180 (257)
T 1b6u_A 171 HGGTYRCFGS 180 (257)
T ss_dssp SCEEEEEEEE
T ss_pred cCEEEEEEEE
Confidence 9999999974
No 181
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.83 E-value=1.4e-19 Score=133.10 Aligned_cols=146 Identities=16% Similarity=0.221 Sum_probs=115.2
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCc
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRG 152 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~ 152 (232)
+|.+. ..+....+.+|+.+.|.|.+.+ .+.|++++..+ ......++.|.|.++..+|.|.|+|.+.+ +.
T Consensus 12 ~P~i~-~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~---~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n--g~- 80 (290)
T 2o26_X 12 PPSIH-PAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN---EMVENKKNEWIQEKAEATRTGTYTCSNSN--GL- 80 (290)
T ss_dssp CCEES-SCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS---CEEEECSSEEEETTCCGGGCEEEEEEESS--SC-
T ss_pred CCEEe-CCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce---eeecCCCceEEEeccCHHhCeEEEEEeeC--Cc-
Confidence 44444 3566778889999999999987 89999998765 12223347899999999999999999998 32
Q ss_pred eeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCC-CeEEE-eeCCEEecCCCeE------EEEEeccccCCce
Q psy15206 153 ARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPH-PILYW-AKDGEIVVNDEYH------SISNFGTSEGTTG 224 (232)
Q Consensus 153 ~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~W-~~~g~~~~~~~~~------~~~~~~~~~~d~g 224 (232)
...+.+.|..+|.....+....+..|+.+.|.|.+.+ |. +.+.| ++||..+....++ .+.+.++...|+|
T Consensus 81 -~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G 158 (290)
T 2o26_X 81 -TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHR 158 (290)
T ss_dssp -EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTT
T ss_pred -cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCC
Confidence 6677888888776656666777889999999999986 77 89999 5788776544333 5667788889999
Q ss_pred -EEEEecC
Q psy15206 225 -SLQCKVP 231 (232)
Q Consensus 225 -~Y~C~~~ 231 (232)
.|+|.|.
T Consensus 159 ~~Y~C~a~ 166 (290)
T 2o26_X 159 LCVRCAAQ 166 (290)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 9999874
No 182
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.83 E-value=1.4e-19 Score=130.61 Aligned_cols=151 Identities=17% Similarity=0.294 Sum_probs=107.2
Q ss_pred CCceEeecCCcEEEEeeeccCC--CCeEEEEeC--Ceee-----------------CCCCcEEee------CCeEEECCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP--IPTISWRRE--NNAI-----------------LPNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~--~~~~-----------------~~~~~~~~~------~~~l~i~~~ 133 (232)
+....+.+|+++.|.|.+.+.+ .+.+.|++. +..+ ....++... ..+|.|.++
T Consensus 8 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 87 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSL 87 (253)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCC
Confidence 4456788999999999998754 668999982 2111 001222221 124999999
Q ss_pred CCCCCeEEEEEeEeCCCCceeeEEEEEEEe---------------ccEEEeccceeeeeccCeEEEEEEeecCCCC----
Q psy15206 134 TKEDRGAYYCVAQNGIGRGARRKIEVKVEF---------------APIVTVQSTRIGQALHHDMDLDCHIEAYPHP---- 194 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~---- 194 (232)
+.+|+|.|.|.+.+..+........+.|.. +|.+...+....+..|++++|.|.+.+.+.+
T Consensus 88 ~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~ 167 (253)
T 3uzq_A 88 TSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGNS 167 (253)
T ss_dssp CGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETTEE
T ss_pred CcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCCc
Confidence 999999999999985544323445566653 4566667777888999999999999998876
Q ss_pred eEEEeeC--CEEec---------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 195 ILYWAKD--GEIVV---------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 195 ~~~W~~~--g~~~~---------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+.|+|+ +..+. ....+.|.+.++..+|+|.|.|.|.
T Consensus 168 ~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 227 (253)
T 3uzq_A 168 FMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRS 227 (253)
T ss_dssp CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred EEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEc
Confidence 8999984 21110 1224568888999999999999984
No 183
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.83 E-value=9.3e-19 Score=120.84 Aligned_cols=138 Identities=21% Similarity=0.317 Sum_probs=105.0
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCC-CCeEEEEe-CcEee-----------------------------eeEEEE
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHP-IPTISWRR-NFKRL-----------------------------GRLHLA 60 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p-~~~~~W~~-~~~~~-----------------------------~~~~~~ 60 (232)
|+.|... +.+..+.+|++++|.|.+.+.+ .+.+.|++ ++..+ |.|.|.
T Consensus 2 p~~v~~~-p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (191)
T 1epf_A 2 VLQVDIV-PSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV 80 (191)
T ss_dssp -CCEEEE-SSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred ceEEEec-CCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEE
Confidence 4567766 8889999999999999999866 88999999 43221 345554
Q ss_pred eeee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCC--CcE-EeeCCeEEE
Q psy15206 61 IPYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPN--GQT-IFTGSTLQI 130 (232)
Q Consensus 61 ~~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~--~~~-~~~~~~l~i 130 (232)
.... .+.|.+..+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .+. ...++.|.|
T Consensus 81 ~~~~~~~~~~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i 159 (191)
T 1epf_A 81 VTAEDGTQSEATVNVKIFQKLMFKN-APTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQI 159 (191)
T ss_dssp EEETTTEEEEEEEEEEEECCSEEEE-CCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEE
T ss_pred EEcCCCcceEEEEEEEeecCceEec-CCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEE
Confidence 4222 45566666776654 455667889999999999999999999999999887432 222 334568999
Q ss_pred CCCCCCCCeEEEEEeEeCCCC
Q psy15206 131 PRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 131 ~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.++..+|.|.|+|.+.|..+.
T Consensus 160 ~~~~~~d~G~Y~C~a~n~~~~ 180 (191)
T 1epf_A 160 RGIKKTDEGTYRCEGRILARG 180 (191)
T ss_dssp TTCCGGGCEEEEEEEEEGGGT
T ss_pred CCCChhhCEEEEEEEEEecce
Confidence 999999999999999997643
No 184
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.82 E-value=4.3e-19 Score=127.48 Aligned_cols=151 Identities=22% Similarity=0.324 Sum_probs=104.4
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEe----------------CCeeeCCC---CcEEee-----CCeEEECCCCCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRR----------------ENNAILPN---GQTIFT-----GSTLQIPRITKE 136 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~----------------~~~~~~~~---~~~~~~-----~~~l~i~~~~~~ 136 (232)
+....+.+|+.+.|.|.+.+.+.+.+.|++ ++...... .++... ..+|.|.+++.+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 87 (246)
T 4dzb_B 8 PSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPE 87 (246)
T ss_dssp CSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGG
T ss_pred CcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHH
Confidence 455678899999999999988888999998 22221111 222221 237999999999
Q ss_pred CCeEEEEEeEeCCC---CceeeEEEEEEE------eccEEEec-cceeeeeccCeEEEEEEeecCCCC--eEEEeeCCEE
Q psy15206 137 DRGAYYCVAQNGIG---RGARRKIEVKVE------FAPIVTVQ-STRIGQALHHDMDLDCHIEAYPHP--ILYWAKDGEI 204 (232)
Q Consensus 137 ~~g~y~C~~~~~~~---~~~~~~~~l~v~------~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~g~~ 204 (232)
|.|.|.|.+.+..+ ........+.|. .+|.+... +....+..|+.+.|.|.+.|.|++ .+.|+|+|..
T Consensus 88 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 167 (246)
T 4dzb_B 88 DSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 167 (246)
T ss_dssp GCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred HCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEE
Confidence 99999999986532 112233456665 35665443 344445569999999999987665 8999999988
Q ss_pred ecC----------------CCeEE----EEEeccccCC-ceEEEEecC
Q psy15206 205 VVN----------------DEYHS----ISNFGTSEGT-TGSLQCKVP 231 (232)
Q Consensus 205 ~~~----------------~~~~~----~~~~~~~~~d-~g~Y~C~~~ 231 (232)
+.. ++.+. +.+......| .|.|+|.|.
T Consensus 168 l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~ 215 (246)
T 4dzb_B 168 VHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQ 215 (246)
T ss_dssp ECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEE
T ss_pred CCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEE
Confidence 753 33343 4445555566 999999984
No 185
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.82 E-value=6.1e-20 Score=128.22 Aligned_cols=131 Identities=19% Similarity=0.279 Sum_probs=93.4
Q ss_pred ecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEE----
Q psy15206 87 KEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVE---- 162 (232)
Q Consensus 87 ~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~---- 162 (232)
.+|+++.|.|.+ +.+.+.|+++|..+... ...++.|.|.++..+|+|.|+|.+.+... ..+.+.+.
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~---~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s----~~~~v~v~~~~~ 85 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFKDGKMIGFL---TEDKKKWNLGSNAKDPRGMYQCKGSQNKS----KPLQVYYRMGSA 85 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEETTEEEEEE---ESSCCCEEEEEGGGCCEEEEEEESSSSCC----CCEEEEEEC---
T ss_pred cCCCeEEEEEcC---CCCEEEEEECCEECCCC---CCCCCeEEeCCCCcCCCEEEEEEecCCCC----eeEEEEEEEecc
Confidence 479999999998 67889999999876421 12356799999999999999999654321 12333332
Q ss_pred -----------------------e----ccEEEeccceeeee-ccCeEEEEEEeecCCCCeEEEeeCCEEecCC------
Q psy15206 163 -----------------------F----APIVTVQSTRIGQA-LHHDMDLDCHIEAYPHPILYWAKDGEIVVND------ 208 (232)
Q Consensus 163 -----------------------~----~p~~~~~~~~~~~~-~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~------ 208 (232)
. ++.+...+. .+. .|++++|.|. +.|.+.+.|+|+|..+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~ 161 (204)
T 1sy6_A 86 DDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPY--KVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNI 161 (204)
T ss_dssp ---------------------------------CCCC--EEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTE
T ss_pred ccccccccccccccccccccccccccccccceecCCc--eeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceE
Confidence 0 112222222 233 8999999999 7888999999999887532
Q ss_pred --CeEEEEEecc-ccCCceEEEEecC
Q psy15206 209 --EYHSISNFGT-SEGTTGSLQCKVP 231 (232)
Q Consensus 209 --~~~~~~~~~~-~~~d~g~Y~C~~~ 231 (232)
....|.+.++ ...|+|.|+|.|.
T Consensus 162 ~~~~~~L~I~~v~~~~D~G~Y~C~A~ 187 (204)
T 1sy6_A 162 GSDEDHLSLKEFSELEQSGYYVCYPR 187 (204)
T ss_dssp EEETTEEEETTCCHHHHCEEEEEEET
T ss_pred ecCCCEEEEeeCCccccCEEEEEEec
Confidence 1335777888 8899999999875
No 186
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.82 E-value=2.3e-19 Score=121.77 Aligned_cols=134 Identities=14% Similarity=0.203 Sum_probs=98.6
Q ss_pred eEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC------------CCcEEe--eCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 84 SVAKEGQSVQLECHAEGHPIPTISWRRENNAILP------------NGQTIF--TGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~------------~~~~~~--~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
..+..|+++.|.|.+.+ +.+.+.|++++..+.. ..+... .+++|.|.+++..|+|.|.|.+.+..
T Consensus 5 v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~ 83 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNIT 83 (171)
T ss_dssp EEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCC
T ss_pred EEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCC
Confidence 46778999999999854 7778999998764321 112222 35789999999999999999998765
Q ss_pred CCceeeEEEEEEEec---cEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeEEEEEeccccCCceEE
Q psy15206 150 GRGARRKIEVKVEFA---PIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYHSISNFGTSEGTTGSL 226 (232)
Q Consensus 150 ~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~d~g~Y 226 (232)
+ ...+.|.|..+ |.+..... ...|.|.+.+.|.|.+.|+++|..+.......+.... ..|+|.|
T Consensus 84 ~---~~~~~L~V~~~~~~p~i~~~~~--------~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~~l~~~~--~~~~g~Y 150 (171)
T 1ccz_A 84 D---TMKFFLYVLEMVSKPMIYWECS--------NATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQW--TNLRAPF 150 (171)
T ss_dssp S---CEEEEEEEECCCCCCEEEEETT--------TTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEEC--SCCSSCE
T ss_pred C---cEEEEEEEECcCCCCEEEEecC--------CcEEEEEeCCCCCcEEEEEECCEECcCCcceEEEEec--cCCCceE
Confidence 5 45667777654 33332211 1379999999999999999999988755555555443 5889999
Q ss_pred EEecC
Q psy15206 227 QCKVP 231 (232)
Q Consensus 227 ~C~~~ 231 (232)
+|.|.
T Consensus 151 ~C~a~ 155 (171)
T 1ccz_A 151 KCKAV 155 (171)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99974
No 187
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.82 E-value=2.5e-19 Score=129.49 Aligned_cols=150 Identities=19% Similarity=0.327 Sum_probs=106.6
Q ss_pred CceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eee--C---------------CCCcEEee------CCeEEECCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAI--L---------------PNGQTIFT------GSTLQIPRIT 134 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~--~---------------~~~~~~~~------~~~l~i~~~~ 134 (232)
....+.+|+++.|.|.+.+.+ .+.+.|++.. ..+ . ...++... ..+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 10 GLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 335677899999999998765 5689999742 111 0 01222221 1249999999
Q ss_pred CCCCeEEEEEeEeCCC---CceeeEEEEEEEe----------------ccEEEeccceeeeeccCeEEEEEEeecCCCCe
Q psy15206 135 KEDRGAYYCVAQNGIG---RGARRKIEVKVEF----------------APIVTVQSTRIGQALHHDMDLDCHIEAYPHPI 195 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~---~~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 195 (232)
.+|+|.|.|.+.+... ........|.|.. +|.+...+....+..|++++|.|.+.+.+.+.
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 169 (256)
T 3umt_A 90 SEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSN 169 (256)
T ss_dssp GGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTC
T ss_pred cccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcE
Confidence 9999999999987621 1123345566653 56677777778889999999999999998889
Q ss_pred EEEeeC--CEEec---------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 196 LYWAKD--GEIVV---------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 196 ~~W~~~--g~~~~---------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|+|+ +..+. ....+.|.+.++..+|+|.|.|.|.
T Consensus 170 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 228 (256)
T 3umt_A 170 LNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQY 228 (256)
T ss_dssp EEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEC
T ss_pred EEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEe
Confidence 999984 21111 1234468888999999999999985
No 188
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.82 E-value=3.2e-20 Score=130.00 Aligned_cols=146 Identities=16% Similarity=0.199 Sum_probs=100.2
Q ss_pred eecCCcEEEEeeeccCC---C-CeEEEEeCCeeeCCCC---------cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCc
Q psy15206 86 AKEGQSVQLECHAEGHP---I-PTISWRRENNAILPNG---------QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRG 152 (232)
Q Consensus 86 ~~~g~~~~l~C~~~~~~---~-~~~~W~~~~~~~~~~~---------~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~ 152 (232)
+..|+.+.|.|.+.+.+ . ..+.|++++..+.... ......+.|.|.+++.+|.|.|.|.+.+..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 67899999999998874 2 4799999997654211 111123469999999999999999999976642
Q ss_pred -eeeEEEE--EEEeccEEEeccceeeeeccCeEEEEEEeecC-CC-CeEEEeeCCEEecC----------CCeEEE----
Q psy15206 153 -ARRKIEV--KVEFAPIVTVQSTRIGQALHHDMDLDCHIEAY-PH-PILYWAKDGEIVVN----------DEYHSI---- 213 (232)
Q Consensus 153 -~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~g~~~~~----------~~~~~~---- 213 (232)
..+.+.+ .+..+|.+...+.......|+.+.|.|.+.|+ |+ +.+.|+|||..+.. ++.|.+
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l 174 (207)
T 2vol_A 95 PIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKL 174 (207)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEE
T ss_pred ceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEE
Confidence 2233333 44567887665544333458999999999985 44 38999999987532 122332
Q ss_pred EEeccccCCceEEEEecC
Q psy15206 214 SNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 214 ~~~~~~~~d~g~Y~C~~~ 231 (232)
.+......|.|.|+|.|.
T Consensus 175 ~i~~~~~~~~g~ytC~a~ 192 (207)
T 2vol_A 175 NVQKSNWEAGNTFTCSVL 192 (207)
T ss_dssp EEEHHHHSSCCEEEEEEE
T ss_pred EECHHHcCCCCEEEEEEE
Confidence 223333367899999974
No 189
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.82 E-value=4.3e-20 Score=130.35 Aligned_cols=146 Identities=22% Similarity=0.222 Sum_probs=100.0
Q ss_pred eecCCcEEEEeeeccC---CC-CeEEEEeCCeeeCCCCc---------EEeeCCeEEECCCCCCCCeEEEEEeEeCCCCc
Q psy15206 86 AKEGQSVQLECHAEGH---PI-PTISWRRENNAILPNGQ---------TIFTGSTLQIPRITKEDRGAYYCVAQNGIGRG 152 (232)
Q Consensus 86 ~~~g~~~~l~C~~~~~---~~-~~~~W~~~~~~~~~~~~---------~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~ 152 (232)
+.+|+.+.|.|.+.+. +. +.+.|++++..+..... .....+.|.|.+++.+|.|.|+|.+.+..+..
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSS
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCC
Confidence 6789999999999886 33 68999999977643211 11123469999999999999999999976542
Q ss_pred -eeeEEEE--EEEeccEEEeccceeeeeccCeEEEEEEeec-CCCC-eEEEeeCCEEecC----------CCeEEEE---
Q psy15206 153 -ARRKIEV--KVEFAPIVTVQSTRIGQALHHDMDLDCHIEA-YPHP-ILYWAKDGEIVVN----------DEYHSIS--- 214 (232)
Q Consensus 153 -~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~g~~~~~----------~~~~~~~--- 214 (232)
..+.+.+ .+..+|.+...+.......|+.+.|.|.+.| +|.+ .+.|+|+|..+.. ++.+.+.
T Consensus 103 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l 182 (218)
T 2rgs_A 103 PIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKL 182 (218)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEE
T ss_pred cceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEE
Confidence 2222222 3456787766554433335999999999998 5665 8999999987632 2223332
Q ss_pred -EeccccCCceEEEEecC
Q psy15206 215 -NFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 215 -~~~~~~~d~g~Y~C~~~ 231 (232)
+......|.|.|+|.|.
T Consensus 183 ~v~~~~~~d~g~YtC~a~ 200 (218)
T 2rgs_A 183 NMKTSKWEKTDSFSCNVR 200 (218)
T ss_dssp EEEHHHHHHCSCEEEEEE
T ss_pred EECHHHcCCCCeEEEEEE
Confidence 22222346899999974
No 190
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.82 E-value=7.8e-20 Score=132.27 Aligned_cols=148 Identities=16% Similarity=0.235 Sum_probs=105.1
Q ss_pred eEeecCCcEEEEeeeccCC--CCeEEEEeCC--eee---C-------------CCCcEEee------CCeEEECCCCCCC
Q psy15206 84 SVAKEGQSVQLECHAEGHP--IPTISWRREN--NAI---L-------------PNGQTIFT------GSTLQIPRITKED 137 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~---~-------------~~~~~~~~------~~~l~i~~~~~~~ 137 (232)
..+.+|+++.|.|.+.+.+ .+.+.|+++. ..+ . ...++... ..+|.|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (257)
T 1f3r_B 10 GLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDD 89 (257)
T ss_dssp SEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTC
T ss_pred ccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCccc
Confidence 4677899999999998875 6789999862 111 0 12233322 2379999999999
Q ss_pred CeEEEEEeEeCCC------Cc--eeeEEEEEEEecc---------------EEEeccceeeeeccCeEEEEEEeecCCCC
Q psy15206 138 RGAYYCVAQNGIG------RG--ARRKIEVKVEFAP---------------IVTVQSTRIGQALHHDMDLDCHIEAYPHP 194 (232)
Q Consensus 138 ~g~y~C~~~~~~~------~~--~~~~~~l~v~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 194 (232)
+|.|.|.+.+..| .. ......|.|...| .+...+....+..|++++|.|.+.+.+.+
T Consensus 90 sG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~ 169 (257)
T 1f3r_B 90 TGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINN 169 (257)
T ss_dssp CEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCBT
T ss_pred CEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCCC
Confidence 9999999998743 10 1133466666542 22334556678899999999999999888
Q ss_pred eEEEee--CCEEec---------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 195 ILYWAK--DGEIVV---------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 195 ~~~W~~--~g~~~~---------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+.|+| +|..+. ....+.|.+.++..+|+|.|.|.|.
T Consensus 170 ~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 229 (257)
T 1f3r_B 170 YLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQY 229 (257)
T ss_dssp CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEE
T ss_pred cEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEe
Confidence 999999 554220 1234568888899999999999874
No 191
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.82 E-value=1.1e-18 Score=124.79 Aligned_cols=158 Identities=23% Similarity=0.437 Sum_probs=110.3
Q ss_pred cCCCeeecCC---CcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee----------------------------eeEE
Q psy15206 10 DTPPVILNNS---TQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL----------------------------GRLH 58 (232)
Q Consensus 10 ~~~P~i~~~~---~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~----------------------------~~~~ 58 (232)
.++|.++..+ +..+.+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.
T Consensus 9 ~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 88 (241)
T 3grw_A 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYT 88 (241)
T ss_dssp --CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred CCCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEE
Confidence 3477776441 44688999999999999999899999999954322 4777
Q ss_pred EEeeee------cCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEe----CCeeeCCCCcEE--
Q psy15206 59 LAIPYT------SPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRR----ENNAILPNGQTI-- 122 (232)
Q Consensus 59 ~~~~~~------~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~----~~~~~~~~~~~~-- 122 (232)
|..... ...|.|.. ++......+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+.......
T Consensus 89 C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 168 (241)
T 3grw_A 89 CVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVT 168 (241)
T ss_dssp EEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEE
T ss_pred EEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeee
Confidence 766322 44455543 34444444566678889999999999999999999999 776654332211
Q ss_pred ----------eeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEE
Q psy15206 123 ----------FTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVT 168 (232)
Q Consensus 123 ----------~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~ 168 (232)
...+.|.|.++..+|.|.|+|.+.|..|. ....+.|.|..+|...
T Consensus 169 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 169 VLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGV-AEKAFWLSVHGPRAAE 223 (241)
T ss_dssp EEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEEEC-------
T ss_pred eeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcce-EEEEEEEEecCCCCCC
Confidence 12347999999999999999999998887 5677788887766543
No 192
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.82 E-value=2.1e-18 Score=119.48 Aligned_cols=119 Identities=17% Similarity=0.194 Sum_probs=90.6
Q ss_pred eEeecCCcEEEEeeeccCCCC--eEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEE
Q psy15206 84 SVAKEGQSVQLECHAEGHPIP--TISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKV 161 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~~~--~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 161 (232)
..+..|+++.|.|.+ +.|.| .++|++.+..+ ...........|.|.+++.+|.|.|.|.+.+..+. ..+.+.|.|
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l-~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~-~~~~~~ltV 93 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL-GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT-FQHTVQLLV 93 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT-CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc-CcEEecCCccEEEECccCcccCceEEEEEEeCCCc-eEEEEEEEE
Confidence 578899999999999 87777 89999865433 11111223457999999999999999999997665 567889999
Q ss_pred EeccEEEeccceeeeeccCeEEEEEEeecC-CC----CeEEEeeCCEEecC
Q psy15206 162 EFAPIVTVQSTRIGQALHHDMDLDCHIEAY-PH----PILYWAKDGEIVVN 207 (232)
Q Consensus 162 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~----~~~~W~~~g~~~~~ 207 (232)
..+|........ ....|+.+ |.|.+.+. |. ++|.|+|||..+..
T Consensus 94 ~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~ 142 (210)
T 1gsm_A 94 YAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEG 142 (210)
T ss_dssp EBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTT
T ss_pred EecCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEccc
Confidence 998865432222 55677888 99999885 64 37999999988753
No 193
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.82 E-value=1.2e-18 Score=120.23 Aligned_cols=148 Identities=30% Similarity=0.508 Sum_probs=108.5
Q ss_pred CCCeeecCC-CcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee-------------------------eeEEEEeeee
Q psy15206 11 TPPVILNNS-TQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL-------------------------GRLHLAIPYT 64 (232)
Q Consensus 11 ~~P~i~~~~-~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~-------------------------~~~~~~~~~~ 64 (232)
+||.|...+ +.++.+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|.....
T Consensus 1 spP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 1 SMPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp CCCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEcc
Confidence 478888763 34678999999999999999899999999954332 4666665322
Q ss_pred ------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeC--CeeeCC-----CCcEEee----CCe
Q psy15206 65 ------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRE--NNAILP-----NGQTIFT----GST 127 (232)
Q Consensus 65 ------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~--~~~~~~-----~~~~~~~----~~~ 127 (232)
.+.|.|..+|.+.. .....+..|+.+.|.|.+.+.|.+.+.|+++ +..+.. ..+.... .+.
T Consensus 81 ~~~~~~~~~l~V~~~p~~~~--~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (192)
T 2va4_A 81 AGEDEKQAFLQVFVQPHIIQ--LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSS 158 (192)
T ss_dssp TEEEEEEEEEEEEEEEEEEE--ECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEE
T ss_pred ccccceEEEEEEEccCcccc--cCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceE
Confidence 45567766666543 2334566799999999999999999999998 444432 1222221 257
Q ss_pred EEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEE
Q psy15206 128 LQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKV 161 (232)
Q Consensus 128 l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 161 (232)
|.|.++..+|.|.|+|.+.|..|. ....+.|.|
T Consensus 159 L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 191 (192)
T 2va4_A 159 LHIKDVKLSDSGRYDCEAASRIGG-HQKSMYLDI 191 (192)
T ss_dssp EEEESCCGGGCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred EEEecCCcccCEEEEEEEEecCCc-eEEEEEEEe
Confidence 999999999999999999998887 555666554
No 194
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.82 E-value=1.1e-18 Score=118.33 Aligned_cols=143 Identities=18% Similarity=0.301 Sum_probs=106.7
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCC-CCeEEEEeCcEee-----------------eeEEEEeee----ecCcee
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHP-IPTISWRRNFKRL-----------------GRLHLAIPY----TSPEAQ 69 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p-~~~~~W~~~~~~~-----------------~~~~~~~~~----~~~~l~ 69 (232)
+|.|... +....+.+|++++|.|.+.+.| .+.+.|++++..+ |.|.|.... ..+.|.
T Consensus 4 ~p~i~~~-p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~~~~~~~~~~~d~G~Y~C~~~~~~~s~~~~l~ 82 (170)
T 3ry4_A 4 KAVLKLE-PPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLT 82 (170)
T ss_dssp BCEEEEE-SCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCSSEEEEECCGGGCEEEEEEETTSBCCCCEEEE
T ss_pred CCEEEeC-CCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCccceEEEecccccCeEEEEEEeCCCceEeEEEE
Confidence 5777777 7777899999999999999876 6799999965433 577887632 255667
Q ss_pred ecCCcEEecCCCCceEeecCCcEEEEeeec-cCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 70 VDTPPVILNNSPQLSVAKEGQSVQLECHAE-GHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 70 v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
|..++.... .....+.+|+.+.|.|.+. +.+.+.+.|++++..+. .......|.|.++..+|.|.|+|.+.|.
T Consensus 83 v~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~----~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 156 (170)
T 3ry4_A 83 VLFEWLVLQ--TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQK----FSHLDPTFSIPQANHSHSGDYHCTGNIG 156 (170)
T ss_dssp EECCSEEEE--CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEE----EESSCCEEEESSCCGGGCEEEEEEEEET
T ss_pred EECCceEec--CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEcc----ccCCCCeEEEEeccccCCEEEEEEEEeC
Confidence 776665543 2334677899999999995 45668899999988753 1223567999999999999999999998
Q ss_pred CCCceeeEEEEEE
Q psy15206 149 IGRGARRKIEVKV 161 (232)
Q Consensus 149 ~~~~~~~~~~l~v 161 (232)
.+...+..+.+.|
T Consensus 157 ~g~~~s~~~~l~V 169 (170)
T 3ry4_A 157 YTLFSSKPVTITV 169 (170)
T ss_dssp TEEEECCCEEEEE
T ss_pred cCccccccEEEEE
Confidence 7654444455544
No 195
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.82 E-value=5.2e-19 Score=129.61 Aligned_cols=150 Identities=19% Similarity=0.345 Sum_probs=107.2
Q ss_pred CCceEeecCCcEEEEeeeccCC--CCeEEEEeCCe--eeC-----------------CCCcEEee------CCeEEECCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP--IPTISWRRENN--AIL-----------------PNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~~--~~~-----------------~~~~~~~~------~~~l~i~~~ 133 (232)
+....+.+|+++.|.|.+.+.+ .+.+.|++++. .+. ...++... ..+|.|.++
T Consensus 33 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 112 (282)
T 1qok_A 33 SGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSL 112 (282)
T ss_dssp CCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcC
Confidence 4556788999999999998765 57899998641 110 01233222 147999999
Q ss_pred CCCCCeEEEEEeEeCCCC----ceeeEEEEEEEec---------------cEEEeccceeeeeccCeEEEEEEeecCCCC
Q psy15206 134 TKEDRGAYYCVAQNGIGR----GARRKIEVKVEFA---------------PIVTVQSTRIGQALHHDMDLDCHIEAYPHP 194 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~~----~~~~~~~l~v~~~---------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 194 (232)
+.+|+|.|.|.+.+..+. .......+.|..+ +.+...+....+..|++++|.|.+.+.+ +
T Consensus 113 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~ 191 (282)
T 1qok_A 113 TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-S 191 (282)
T ss_dssp CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-S
T ss_pred ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-c
Confidence 999999999999987541 1112345666543 2345556677788999999999999998 8
Q ss_pred eEEEee--CCEEec---------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 195 ILYWAK--DGEIVV---------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 195 ~~~W~~--~g~~~~---------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+.|+| +|..+. ....+.|.+.++..+|+|.|.|.|.
T Consensus 192 ~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 251 (282)
T 1qok_A 192 YMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQR 251 (282)
T ss_dssp CCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred eEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEe
Confidence 999999 554321 1134568888899999999999984
No 196
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.82 E-value=8.2e-19 Score=128.20 Aligned_cols=152 Identities=16% Similarity=0.221 Sum_probs=104.8
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCe-----eeC---------CCCcEEee----CCeEEECCCCCCCCeEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENN-----AIL---------PNGQTIFT----GSTLQIPRITKEDRGAY 141 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~-----~~~---------~~~~~~~~----~~~l~i~~~~~~~~g~y 141 (232)
.+....+.+|+++.|.|.+.+.+.+.+.|++++. .+. ...++... ..+|.|.+++.+|+|.|
T Consensus 18 ~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 97 (276)
T 3auv_A 18 SPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATY 97 (276)
T ss_dssp ECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEE
Confidence 3556678899999999999988888999998642 110 11232221 12799999999999999
Q ss_pred EEEeEeCCCCceeeEEEEEEEecc-------------E-EEeccceeeeeccCeEEEEEEeecCC--CCeEEEeeCC--E
Q psy15206 142 YCVAQNGIGRGARRKIEVKVEFAP-------------I-VTVQSTRIGQALHHDMDLDCHIEAYP--HPILYWAKDG--E 203 (232)
Q Consensus 142 ~C~~~~~~~~~~~~~~~l~v~~~p-------------~-~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~g--~ 203 (232)
.|.+.+..+........+.|..+| . ....+....+..|++++|.|.+.+.+ .+.+.|+|++ .
T Consensus 98 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~ 177 (276)
T 3auv_A 98 YCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGK 177 (276)
T ss_dssp EEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTC
T ss_pred EEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCC
Confidence 999998644322223455554432 2 23345566788999999999999887 4789999963 1
Q ss_pred E---ec--------------C-----------CCeEEEEEeccccCCceEEEEecC
Q psy15206 204 I---VV--------------N-----------DEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 204 ~---~~--------------~-----------~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
. +. . ...+.|.+.++..+|+|.|+|.|.
T Consensus 178 ~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 233 (276)
T 3auv_A 178 CLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARF 233 (276)
T ss_dssp CEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEE
Confidence 1 10 0 123467788889999999999874
No 197
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.81 E-value=2.1e-18 Score=124.71 Aligned_cols=151 Identities=16% Similarity=0.252 Sum_probs=108.1
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eee-------------CCCCcEEe------eCCeEEECCCCCCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAI-------------LPNGQTIF------TGSTLQIPRITKEDR 138 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~-------------~~~~~~~~------~~~~l~i~~~~~~~~ 138 (232)
.+....+.+|+++.|.|.+.+.+.+.+.|++.. ... ....++.. ...+|.|.+++.+|+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 88 (256)
T 3tf7_C 9 PDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDS 88 (256)
T ss_dssp SCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGC
T ss_pred cCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccC
Confidence 456678889999999999988888899999842 110 00112211 123699999999999
Q ss_pred eEEEEEeEeCCCCc---eeeEEEEEEEe--------------------ccEEEeccceeeeeccCeEEEEEEeecCCCCe
Q psy15206 139 GAYYCVAQNGIGRG---ARRKIEVKVEF--------------------APIVTVQSTRIGQALHHDMDLDCHIEAYPHPI 195 (232)
Q Consensus 139 g~y~C~~~~~~~~~---~~~~~~l~v~~--------------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 195 (232)
|.|.|.+.+..+.. ......|.|.. +|.+...+....+..|++++|.|.+.+. .+.
T Consensus 89 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~~ 167 (256)
T 3tf7_C 89 AVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS-HNY 167 (256)
T ss_dssp SEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC-CSE
T ss_pred EEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC-ceE
Confidence 99999999864321 12234555553 5567777777788899999999999877 678
Q ss_pred EEEeeCC--E---Eec----------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 196 LYWAKDG--E---IVV----------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 196 ~~W~~~g--~---~~~----------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.|+|+. . .+. ....+.|.+.++..+|+|.|+|.|.
T Consensus 168 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 230 (256)
T 3tf7_C 168 MYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASS 230 (256)
T ss_dssp EEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEec
Confidence 9999832 1 111 2244578888999999999999983
No 198
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.81 E-value=1.5e-18 Score=123.25 Aligned_cols=160 Identities=23% Similarity=0.419 Sum_probs=114.5
Q ss_pred CcccCCCeeecCC---CcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee----------------------------e
Q psy15206 7 SQVDTPPVILNNS---TQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL----------------------------G 55 (232)
Q Consensus 7 ~~~~~~P~i~~~~---~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~----------------------------~ 55 (232)
.....+|.+...+ +....+.+|++++|.|.+.+.|.+.+.|++++..+ |
T Consensus 10 ~~~~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 89 (231)
T 3ojm_B 10 SNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKG 89 (231)
T ss_dssp ---CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCE
T ss_pred cCCccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCE
Confidence 3445678887651 26888999999999999999899999999954322 4
Q ss_pred eEEEEeeee------cCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEe----CCeeeCCCCcE
Q psy15206 56 RLHLAIPYT------SPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRR----ENNAILPNGQT 121 (232)
Q Consensus 56 ~~~~~~~~~------~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~----~~~~~~~~~~~ 121 (232)
.|+|..... ...|.|.. +|......+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+......
T Consensus 90 ~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~ 169 (231)
T 3ojm_B 90 NYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLP 169 (231)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCB
T ss_pred EEEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcc
Confidence 677765322 44455543 33444334566778899999999999999999999999 66655332211
Q ss_pred -----------EeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEE
Q psy15206 122 -----------IFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIV 167 (232)
Q Consensus 122 -----------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 167 (232)
....+.|.|.++...|.|.|+|.+.|..|. ....+.+.|..+|..
T Consensus 170 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 170 YLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQ-ANQSAWLTVLPKQQA 225 (231)
T ss_dssp CEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEECCC--
T ss_pred eEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccce-EeeEEEEEEecCCCC
Confidence 112357999999999999999999998887 567778888776653
No 199
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.81 E-value=3.2e-19 Score=125.91 Aligned_cols=150 Identities=21% Similarity=0.382 Sum_probs=101.8
Q ss_pred CCceEeecCCcEEEEeeeccCC--CCeEEEEeC--CeeeC-----------------CCCcEEee------CCeEEECCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP--IPTISWRRE--NNAIL-----------------PNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~--~~~~~-----------------~~~~~~~~------~~~l~i~~~ 133 (232)
+....+.+|+++.|.|.+.+.+ .+.+.|+++ +..+. ...++... ..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 3445677899999999998765 578999987 33220 01232221 247999999
Q ss_pred CCCCCeEEEEEeEeCCCC---ceeeEEEEEEEe----ccEEEeccceeeeeccCeEEEEEEeec-CCCC-eEEEeeCCEE
Q psy15206 134 TKEDRGAYYCVAQNGIGR---GARRKIEVKVEF----APIVTVQSTRIGQALHHDMDLDCHIEA-YPHP-ILYWAKDGEI 204 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~~---~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~g~~ 204 (232)
+.+|.|.|.|.+.+..+. .......+.|.. +|.+...+....+..|+.+.|.|.+.| .|.| .|.|+++|..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 166 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcc
Confidence 999999999999987532 112344566654 366655443345668999999999998 8988 9999999865
Q ss_pred ec--------CCCeE----EEEEeccccCCceEEEEecC
Q psy15206 205 VV--------NDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 205 ~~--------~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+. ..+.+ .+.+. ....|.|.|+|.|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~s~L~i~-~~~~d~g~Y~C~a~ 204 (219)
T 1c1e_H 167 SGVHTFPAVLQSDLYTLSSSVTVP-SSPRPSETVTCNVA 204 (219)
T ss_dssp TTEEECCCEESSSCEEEEEEEEEE-SSSTTTSCCEEEEE
T ss_pred cceEecCCcccCCeEEEEEEEEEe-cccCCCCEEEEEEE
Confidence 31 11222 34443 33346699999974
No 200
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.81 E-value=6.2e-19 Score=127.66 Aligned_cols=152 Identities=15% Similarity=0.228 Sum_probs=101.4
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eee---C--C-------------CCcEE-----eeCCeEEECCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAI---L--P-------------NGQTI-----FTGSTLQIPRIT 134 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~---~--~-------------~~~~~-----~~~~~l~i~~~~ 134 (232)
.+....+.+|+++.|.|.+.+.+.+.+.|++.. ... . . ..... ....+|.|.+++
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 87 (259)
T 3omz_A 8 RTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLI 87 (259)
T ss_dssp ---CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCC
T ss_pred CCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCC
Confidence 455678889999999999988888899999831 110 0 0 00111 123469999999
Q ss_pred CCCCeEEEEEeEeCCCC--ceeeEEEEEEEe-----------------ccEEEeccceeeeeccCeEEEEEEeecC-CCC
Q psy15206 135 KEDRGAYYCVAQNGIGR--GARRKIEVKVEF-----------------APIVTVQSTRIGQALHHDMDLDCHIEAY-PHP 194 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~--~~~~~~~l~v~~-----------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~ 194 (232)
.+|+|.|.|.+.+..+. .......|.|.. .|.+...+....+..|++++|.|.+.+. +.+
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 167 (259)
T 3omz_A 88 ENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSY 167 (259)
T ss_dssp GGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSSC
T ss_pred cccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCc
Confidence 99999999999986542 123344566654 2456666777888899999999998775 778
Q ss_pred eEEEeeCC--EE---e--------------------cCCCeEEEEEeccccCCceEEEEecC
Q psy15206 195 ILYWAKDG--EI---V--------------------VNDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 195 ~~~W~~~g--~~---~--------------------~~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+.|+|++ .. + .....+.|.+.++..+|+|.|.|.++
T Consensus 168 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 229 (259)
T 3omz_A 168 YIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALG 229 (259)
T ss_dssp EEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEE
T ss_pred eEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEe
Confidence 89999843 11 1 01223557888889999999999984
No 201
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.81 E-value=6.4e-19 Score=127.37 Aligned_cols=152 Identities=16% Similarity=0.263 Sum_probs=107.9
Q ss_pred CCCceEeecCCcEEEEeeeccC--CCCeEEEEeCC--eee-----------------CCCCcEEee------CCeEEECC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGH--PIPTISWRREN--NAI-----------------LPNGQTIFT------GSTLQIPR 132 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~~-----------------~~~~~~~~~------~~~l~i~~ 132 (232)
.+....+.+|+++.|.|.+.+. +.+.+.|++.. ..+ ....++... ..+|.|.+
T Consensus 12 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 91 (256)
T 3juy_B 12 QSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRS 91 (256)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred ecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECC
Confidence 4666788899999999999873 56689999742 110 001223222 12599999
Q ss_pred CCCCCCeEEEEEeEeC-----------CCCceeeEEEEEEEe---------------ccEEEeccceeeeeccCeEEEEE
Q psy15206 133 ITKEDRGAYYCVAQNG-----------IGRGARRKIEVKVEF---------------APIVTVQSTRIGQALHHDMDLDC 186 (232)
Q Consensus 133 ~~~~~~g~y~C~~~~~-----------~~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~g~~~~l~C 186 (232)
++.+|+|.|.|.+.+. ..........+.|.. ++.+...+....+..|++++|.|
T Consensus 92 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C 171 (256)
T 3juy_B 92 LRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATFSC 171 (256)
T ss_dssp CCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEEEE
T ss_pred CCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEEEE
Confidence 9999999999999886 111123344566654 34566667788889999999999
Q ss_pred EeecCCC-CeEEEeeC--CE--Ee-------------------cCCCeEEEEEeccccCCceEEEEecC
Q psy15206 187 HIEAYPH-PILYWAKD--GE--IV-------------------VNDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 187 ~~~~~p~-~~~~W~~~--g~--~~-------------------~~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+.+.+. +.+.|+|+ +. .. .....+.|.+.++..+|+|.|.|.|.
T Consensus 172 ~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 240 (256)
T 3juy_B 172 RSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVY 240 (256)
T ss_dssp EESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEEC
T ss_pred EECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEe
Confidence 9998876 78999983 21 11 01234568888999999999999985
No 202
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.81 E-value=1.1e-18 Score=126.16 Aligned_cols=151 Identities=20% Similarity=0.281 Sum_probs=105.4
Q ss_pred CCceEeecCCcEEEEeeeccC--CCCeEEEEeCC--ee--eC--------------CCCcEEee------CCeEEECCCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGH--PIPTISWRREN--NA--IL--------------PNGQTIFT------GSTLQIPRIT 134 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~--~~--------------~~~~~~~~------~~~l~i~~~~ 134 (232)
+....+.+|+++.|.|.+.+. +.+.+.|++.. .. .. ...++... ..+|.|.+++
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 94 (257)
T 3gkz_A 15 SGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVS 94 (257)
T ss_dssp ECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCC
Confidence 444567899999999999874 46789999842 11 00 11122221 1269999999
Q ss_pred CCCCeEEEEEeEeCCCC---ceeeEEEEEEEec--------------cEEEeccceeeeeccCeEEEEEEeecCCCC-eE
Q psy15206 135 KEDRGAYYCVAQNGIGR---GARRKIEVKVEFA--------------PIVTVQSTRIGQALHHDMDLDCHIEAYPHP-IL 196 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~---~~~~~~~l~v~~~--------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~ 196 (232)
.+|+|.|.|.+.+..+. .......+.|..+ +.+...+....+..|++++|.|.+.+.+.+ .+
T Consensus 95 ~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v 174 (257)
T 3gkz_A 95 SEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHL 174 (257)
T ss_dssp GGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGGGE
T ss_pred hhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccceEE
Confidence 99999999999986211 1223345666543 556666777888899999999999998887 89
Q ss_pred EEeeC--CEEec---------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 197 YWAKD--GEIVV---------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 197 ~W~~~--g~~~~---------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|+|+ +..+. ....+.|.+.++..+|+|.|.|.|.
T Consensus 175 ~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 232 (257)
T 3gkz_A 175 YWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQW 232 (257)
T ss_dssp EEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred EEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEc
Confidence 99983 22111 1134568888999999999999985
No 203
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.81 E-value=6.5e-19 Score=123.85 Aligned_cols=149 Identities=17% Similarity=0.302 Sum_probs=103.5
Q ss_pred CCCceEeecCCcEEEEeeeccC-------CCCeEEEEeCCeee-----C------------CCCcEEee------CCeEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGH-------PIPTISWRRENNAI-----L------------PNGQTIFT------GSTLQ 129 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~-------~~~~~~W~~~~~~~-----~------------~~~~~~~~------~~~l~ 129 (232)
.+....+.+|+.+.|.|.+.+. +.+.+.|++++... . ...++... +.+|.
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 85 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLS 85 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEE
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEE
Confidence 3556778899999999998653 45679999986521 0 11233321 23799
Q ss_pred ECCCCCCCCeEEEEEeEeCCCCc---eeeEEEEEEEe---ccEEEeccceeeeeccCeEEEEEEeecC----CCCeEEEe
Q psy15206 130 IPRITKEDRGAYYCVAQNGIGRG---ARRKIEVKVEF---APIVTVQSTRIGQALHHDMDLDCHIEAY----PHPILYWA 199 (232)
Q Consensus 130 i~~~~~~~~g~y~C~~~~~~~~~---~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~----p~~~~~W~ 199 (232)
|.+++.+|.|.|.|.+.+..+.. ....+.|.|.. +|.+.. +. .+.+|+.++|.|.+.+. |.|.+.|+
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~ 162 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTFSWT 162 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEEEEE
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceEEEe
Confidence 99999999999999999865221 12356677765 344433 22 25689999999999774 78899999
Q ss_pred eCCEEecC---CCeEEEEEeccccCCceEEEEecC
Q psy15206 200 KDGEIVVN---DEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 200 ~~g~~~~~---~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+++..+.. ...-.+.+..+...|.|.|+|.|.
T Consensus 163 ~~~~~~~~~~~~~~~~L~i~~~~~~~~g~Y~C~a~ 197 (214)
T 2zg1_A 163 GNALSPLDPETTRSSELTLTPRPEDHGTNLTCQMK 197 (214)
T ss_dssp SSTTSSSCSSCCCSSEEEECCCTTCCSCEEEEEEE
T ss_pred CCCCccCCCCceeEEEEEEecccHHcCcEEEEEEE
Confidence 99854321 223456666777789999999974
No 204
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.81 E-value=8e-19 Score=127.57 Aligned_cols=147 Identities=16% Similarity=0.270 Sum_probs=104.2
Q ss_pred CCCceEeecCCcEEEEeeec---cCCCCeEEEEeCCeeeCCC------------------CcEEee------CCeEEECC
Q psy15206 80 SPQLSVAKEGQSVQLECHAE---GHPIPTISWRRENNAILPN------------------GQTIFT------GSTLQIPR 132 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~---~~~~~~~~W~~~~~~~~~~------------------~~~~~~------~~~l~i~~ 132 (232)
.+....+.+|+.+.|.|.+. +.+.+.+.|++.+...... .+.... +.+|.|.+
T Consensus 11 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 90 (268)
T 3mj6_A 11 SSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQD 90 (268)
T ss_dssp -CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECS
T ss_pred CCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECC
Confidence 45567788999999999987 5666789999965432111 222221 26799999
Q ss_pred CCCCCCeEEEEEeEeCCCCc-eeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEe---ecCCCCeEEEeeC-CEE---
Q psy15206 133 ITKEDRGAYYCVAQNGIGRG-ARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHI---EAYPHPILYWAKD-GEI--- 204 (232)
Q Consensus 133 ~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~---~~~p~~~~~W~~~-g~~--- 204 (232)
++.+|.|.|+|.+.+..+.. ....+.+.|.. ..+....+..|+++.|.|.+ .+.|.+.+.|+++ +..
T Consensus 91 v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-----~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~ 165 (268)
T 3mj6_A 91 VQKADEGIYTCEIRLKNESMVMKKPVELWVLP-----EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEE 165 (268)
T ss_dssp CCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC-----CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSC
T ss_pred CCHhHCEEEEEEEEecCCcceEEEEEEEEEec-----cCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcc
Confidence 99999999999999865432 33444555431 23446678899999999999 6778899999993 211
Q ss_pred ---e-----------------------c---CCCeEEEEEeccccCCceEEEEecC
Q psy15206 205 ---V-----------------------V---NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 205 ---~-----------------------~---~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+ . ......|.+.++..+|+|.|+|.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 221 (268)
T 3mj6_A 166 ETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIY 221 (268)
T ss_dssp EEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEE
T ss_pred eeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEE
Confidence 0 0 0234567788889999999999873
No 205
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.81 E-value=2.6e-18 Score=124.10 Aligned_cols=151 Identities=16% Similarity=0.204 Sum_probs=102.2
Q ss_pred CCceEeecCCcEEEEeeeccC--CCCeEEEEeCC--eeeC------------CCCcEEee----CCeEEECCCCCCCCeE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGH--PIPTISWRREN--NAIL------------PNGQTIFT----GSTLQIPRITKEDRGA 140 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~~~------------~~~~~~~~----~~~l~i~~~~~~~~g~ 140 (232)
+....+.+|+++.|.|.+.+. +.+.+.|++.. ..+. ...++... ..+|.|.+++.+|+|.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 88 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEAD 88 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEE
Confidence 345678899999999999876 67789999853 1110 11222221 2269999999999999
Q ss_pred EEEEeEeCCCC--ceeeEEEEEEEeccE--------------------EEeccceeeeeccCeEEEEEEeecCC--CCeE
Q psy15206 141 YYCVAQNGIGR--GARRKIEVKVEFAPI--------------------VTVQSTRIGQALHHDMDLDCHIEAYP--HPIL 196 (232)
Q Consensus 141 y~C~~~~~~~~--~~~~~~~l~v~~~p~--------------------~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~ 196 (232)
|.|.+.+..+. .......|.|..++. ....+....+..|++++|.|.+.+.+ .+.+
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 168 (256)
T 3ux9_B 89 YYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAM 168 (256)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEE
T ss_pred EEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEE
Confidence 99999985432 122334566654431 22223344578899999999999877 6789
Q ss_pred EEeeC--CEEe------c----------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 197 YWAKD--GEIV------V----------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 197 ~W~~~--g~~~------~----------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|+|+ +..+ . ....+.|.+.++..+|+|.|.|.|.
T Consensus 169 ~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 233 (256)
T 3ux9_B 169 SWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARY 233 (256)
T ss_dssp EEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 99986 3211 0 1334568888899999999999874
No 206
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.81 E-value=1.5e-18 Score=122.60 Aligned_cols=149 Identities=15% Similarity=0.213 Sum_probs=105.8
Q ss_pred ceEeecCCcEEEEeeeccCCCC---eEEEEeCCeeeCC----------------CCcE-----------EeeCCeEEECC
Q psy15206 83 LSVAKEGQSVQLECHAEGHPIP---TISWRRENNAILP----------------NGQT-----------IFTGSTLQIPR 132 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~~~~---~~~W~~~~~~~~~----------------~~~~-----------~~~~~~l~i~~ 132 (232)
.+....|+++.|.|.+.+.+.+ .+.|++++..... ..+. ...+.+|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 3566789999999999886665 3889997654310 0000 11235799999
Q ss_pred CCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEe-ecCCCCeEEEeeCCEEec-----
Q psy15206 133 ITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHI-EAYPHPILYWAKDGEIVV----- 206 (232)
Q Consensus 133 ~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~g~~~~----- 206 (232)
++.+|.|.|.|.+.+..+........+.+..+|.....+.......++.+.+.|.+ .+.|++.+.|++++..+.
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~ 169 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQE 169 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEE
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcce
Confidence 99999999999999876654555556666677776665555556677777788775 567888999999865432
Q ss_pred ---CCCeE----EEEEeccccCCceEEEEecC
Q psy15206 207 ---NDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 ---~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.++.+ .|.+..+...|+|+|+|.|.
T Consensus 170 ~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~ 201 (225)
T 4fmk_A 170 PGIQAGTVTIISRYSLVPVGRADGVKVTCRVE 201 (225)
T ss_dssp ECSSTTCEEEEEEEEECCCGGGTTCEEEEEEE
T ss_pred EEecCCCEEEEEEEEEeeCCHHHCCEEEEEEE
Confidence 22222 46777788899999999984
No 207
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.80 E-value=1.5e-18 Score=124.80 Aligned_cols=151 Identities=15% Similarity=0.226 Sum_probs=102.4
Q ss_pred CCceEeecCCcEEEEeeeccCC-----CCeEEEEeCC--eee---C---------CCCcEEee----CCeEEECCCCCCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP-----IPTISWRREN--NAI---L---------PNGQTIFT----GSTLQIPRITKED 137 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~-----~~~~~W~~~~--~~~---~---------~~~~~~~~----~~~l~i~~~~~~~ 137 (232)
+....+.+|+++.|.|.+.+.+ .+.+.|++.. ..+ . ...++... ..+|.|.+++.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 87 (247)
T 1svz_A 8 PLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAED 87 (247)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHH
Confidence 4556788999999999998877 5789999853 111 0 01232221 2379999999999
Q ss_pred CeEEEEEeEeCCCCceeeEEEEEEEecc-------------EEEeccceeeeeccCeEEEEEEeecCC--CCeEEEeeCC
Q psy15206 138 RGAYYCVAQNGIGRGARRKIEVKVEFAP-------------IVTVQSTRIGQALHHDMDLDCHIEAYP--HPILYWAKDG 202 (232)
Q Consensus 138 ~g~y~C~~~~~~~~~~~~~~~l~v~~~p-------------~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~g 202 (232)
+|.|.|.+.+..+........|.|..++ .....+....+..|++++|.|.+.+.+ .+.+.|+|++
T Consensus 88 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~ 167 (247)
T 1svz_A 88 LGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQA 167 (247)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEeC
Confidence 9999999988644322233456665432 223333344588899999999999885 4589999952
Q ss_pred --EE---e---c----------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 203 --EI---V---V----------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 203 --~~---~---~----------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.. + . ....+.|.+.++..+|+|.|.|.|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 226 (247)
T 1svz_A 168 PGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRD 226 (247)
T ss_dssp TTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEe
Confidence 11 1 0 1123567788889999999999874
No 208
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.80 E-value=2e-18 Score=128.28 Aligned_cols=156 Identities=18% Similarity=0.301 Sum_probs=117.4
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEec-CCCCCeEEEEeCcEee------------------------------e
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHAE-GHPIPTISWRRNFKRL------------------------------G 55 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~-~~p~~~~~W~~~~~~~------------------------------~ 55 (232)
+.+..+|.+... +....+.+|+.+.+.|.+. +.|.+.+.|++++..+ +
T Consensus 112 l~v~~~P~~~~~-~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g 190 (313)
T 4fqp_A 112 LRVLAKPQNTAE-VQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGK 190 (313)
T ss_dssp ECCBBCCEEEEE-ECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTC
T ss_pred eeeccCCcceec-ccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCe
Confidence 456678888777 6677788899999999876 6889999999953221 3
Q ss_pred eEEEEeeee--------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCC-eEEEEeCCeeeCCCCcEEeeCC
Q psy15206 56 RLHLAIPYT--------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIP-TISWRRENNAILPNGQTIFTGS 126 (232)
Q Consensus 56 ~~~~~~~~~--------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~ 126 (232)
.|+|..... .+.|.|..+|.+.........+..|+.+.|.|.+.|.|.| .+.|++++..+.. .....++
T Consensus 191 ~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~--~~~~~~~ 268 (313)
T 4fqp_A 191 NVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPP--FAVAQGA 268 (313)
T ss_dssp EEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCT--TEEEETT
T ss_pred eEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCC--ceEEeCC
Confidence 566655321 4456666667654334444556678999999999999988 5999999987643 3345567
Q ss_pred eEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccE
Q psy15206 127 TLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPI 166 (232)
Q Consensus 127 ~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 166 (232)
.|.|.++...|+|.|+|.+.|..|. ....+.|.|..+|.
T Consensus 269 ~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~~~PP 307 (313)
T 4fqp_A 269 QLLIRPVDKPINTTLICNVTNALGA-RQAELTVQVKEGPP 307 (313)
T ss_dssp EEEECCCSSCCEEEEEEEEECSSCE-EEEEEEEEEECCC-
T ss_pred EEEECcCChhhCEEEEEEEEeCCCc-EEEEEEEEEEeCCC
Confidence 8999999999999999999999887 56778888876553
No 209
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.80 E-value=5.4e-18 Score=116.82 Aligned_cols=135 Identities=19% Similarity=0.341 Sum_probs=101.6
Q ss_pred eeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEe-CcEe---------------------------eeeEEEEeee--
Q psy15206 14 VILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRR-NFKR---------------------------LGRLHLAIPY-- 63 (232)
Q Consensus 14 ~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~-~~~~---------------------------~~~~~~~~~~-- 63 (232)
.|... +.+..+.+|++++|.|.+.+.|. .+.|++ ++.. .|.|.|....
T Consensus 4 ~~~~~-~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (189)
T 2v44_A 4 QVTIS-LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAK 81 (189)
T ss_dssp EEEES-CSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTT
T ss_pred EEEec-CCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCC
Confidence 34555 78889999999999999998777 999999 3321 1466666532
Q ss_pred -----ecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeC--CCCcE-EeeCCeEEECCCCC
Q psy15206 64 -----TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAIL--PNGQT-IFTGSTLQIPRITK 135 (232)
Q Consensus 64 -----~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~--~~~~~-~~~~~~l~i~~~~~ 135 (232)
..+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+. ...++ ...++.|.|.++..
T Consensus 82 g~~~~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 160 (189)
T 2v44_A 82 GQTQEATVVLEIYQKLTFRE-VVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINK 160 (189)
T ss_dssp SCEEEEEEEEEEECCCEEES-CCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCG
T ss_pred CCcEEEEEEEEEecCCceee-cCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCc
Confidence 255667777776654 3455678899999999999999999999999988763 22233 33456899999999
Q ss_pred CCCeEEEEEeEeCCCC
Q psy15206 136 EDRGAYYCVAQNGIGR 151 (232)
Q Consensus 136 ~~~g~y~C~~~~~~~~ 151 (232)
+|.|.|+|.+.|..+.
T Consensus 161 ~d~G~Y~C~a~n~~~~ 176 (189)
T 2v44_A 161 SDEGIYRCEGRVEARG 176 (189)
T ss_dssp GGCEEEEEEEEETTTT
T ss_pred ccCeEEEEEEEccccC
Confidence 9999999999998754
No 210
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.80 E-value=3.5e-18 Score=116.84 Aligned_cols=137 Identities=22% Similarity=0.290 Sum_probs=97.4
Q ss_pred CceEeecCCcEEEEeeecc-CCCCeEEEEeC-CeeeC------------CC--CcEEe--eCCeEEECCCCCCCCeEEEE
Q psy15206 82 QLSVAKEGQSVQLECHAEG-HPIPTISWRRE-NNAIL------------PN--GQTIF--TGSTLQIPRITKEDRGAYYC 143 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~-~~~~~------------~~--~~~~~--~~~~l~i~~~~~~~~g~y~C 143 (232)
....+.+|+++.|.|...+ .+.+.+.|++. +..+. .. .+... .+++|.|.+++.+|.|.|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 3467789999999999854 33578999994 32211 11 23333 35689999999999999999
Q ss_pred EeEeCCCCceeeEEEEEEEec---cEEEeccceeeeeccCeEEEEEEe-ecCCCCeEEEeeCCEEecCCCeEEEEEeccc
Q psy15206 144 VAQNGIGRGARRKIEVKVEFA---PIVTVQSTRIGQALHHDMDLDCHI-EAYPHPILYWAKDGEIVVNDEYHSISNFGTS 219 (232)
Q Consensus 144 ~~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~ 219 (232)
.+.+.. .....+.|.|..+ |.+.. .+..+.|.|.+ .| |.+.+.|+++|..+.......+.+..
T Consensus 87 ~v~~~~--~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~~~~~~l~~~~-- 153 (180)
T 2dru_A 87 RMLHET--EDQWKITMEVYEMVSKPMIYW--------ECSNATLTCEVLEG-TDVELKLYQGKEHLRSLRQKTMSYQW-- 153 (180)
T ss_dssp EEESSS--EEEEEEEEEEECCCCCCEEEE--------EGGGTEEEEECSSC-TTCEEEEEETTEEEEEESSSEEEEEC--
T ss_pred EEEcCC--eEEEEEEEEEECCCCCCEEEe--------cCCCEEEEEEeCCC-CCCEEEEEECCeECcCCCCCEEEEEE--
Confidence 997754 3556677777653 23222 34669999999 66 89999999999887633334444432
Q ss_pred cCCceEEEEecC
Q psy15206 220 EGTTGSLQCKVP 231 (232)
Q Consensus 220 ~~d~g~Y~C~~~ 231 (232)
..|+|.|+|.|.
T Consensus 154 ~~d~g~Y~C~a~ 165 (180)
T 2dru_A 154 TNLRAPFKCKAV 165 (180)
T ss_dssp SCCSSCEEEEEE
T ss_pred hhcCccEEEEEe
Confidence 689999999974
No 211
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.80 E-value=1.4e-19 Score=129.08 Aligned_cols=151 Identities=20% Similarity=0.254 Sum_probs=101.8
Q ss_pred CCceEeecCCcEEEEeeeccCC-CC-eEEEEeCCe--ee------------CCCCcEEee----CCeEEECCCCCCCCeE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP-IP-TISWRRENN--AI------------LPNGQTIFT----GSTLQIPRITKEDRGA 140 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~-~~-~~~W~~~~~--~~------------~~~~~~~~~----~~~l~i~~~~~~~~g~ 140 (232)
+....+.+|+.+.|.|.+.+.+ .+ .+.|+++.. .+ ....++... ..+|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 4556778899999999998754 34 699998632 11 011233221 2379999999999999
Q ss_pred EEEEeEeCCCC--ceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecCCCC--eEEEeeCCEEecCC----
Q psy15206 141 YYCVAQNGIGR--GARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHP--ILYWAKDGEIVVND---- 208 (232)
Q Consensus 141 y~C~~~~~~~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~g~~~~~~---- 208 (232)
|.|.+.+..+. .......+.|. .+|.+...+.......|+.++|.|.+.|.+++ .+.|+|||..+...
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 99999987652 11122344442 34555443333333468899999999986443 89999999876432
Q ss_pred -------Ce----EEEEEeccccCCceEEEEecC
Q psy15206 209 -------EY----HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 -------~~----~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.. ..+.+......|+|.|+|.|.
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 219 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT 219 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEE
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEE
Confidence 11 245666777789999999984
No 212
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.80 E-value=1.2e-18 Score=127.96 Aligned_cols=150 Identities=17% Similarity=0.216 Sum_probs=110.1
Q ss_pred EecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceee
Q psy15206 76 ILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARR 155 (232)
Q Consensus 76 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~ 155 (232)
.+...+....+.+|+.+.|.|.+.+ .+.|++++..... .........|.|.++...|.|.|+|.+.+..+. ...
T Consensus 6 ~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~ 79 (289)
T 3ejj_X 6 VIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYWT-LDPESPGSTLTTRNATFKNTGTYRCTELEDPMA-GST 79 (289)
T ss_dssp EEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSSE-ECCCSSCCEEEESSCCGGGCEEEEEECCC------CE
T ss_pred EecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceEE-EeccCCccEEEEeeeccccCEEEEEEEeccCCc-cee
Confidence 3344566678889999999999876 5999987643211 011223468999999999999999999887665 566
Q ss_pred EEEEEEEeccE-EEeccceeeeeccCeEEEEEEeecCCCCe-EEEee-CCEEecCCCeE------EEEEeccccCCceEE
Q psy15206 156 KIEVKVEFAPI-VTVQSTRIGQALHHDMDLDCHIEAYPHPI-LYWAK-DGEIVVNDEYH------SISNFGTSEGTTGSL 226 (232)
Q Consensus 156 ~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~-~g~~~~~~~~~------~~~~~~~~~~d~g~Y 226 (232)
.+.+.|..+|. +...+....+..|+.+.|.|.+.+.+.+. +.|++ ++..+....++ .+.+.++...|+|.|
T Consensus 80 ~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 159 (289)
T 3ejj_X 80 TIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTY 159 (289)
T ss_dssp EEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEE
T ss_pred EEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEE
Confidence 77888887665 45566777888999999999999877765 99986 56665443332 466777888999999
Q ss_pred EEecC
Q psy15206 227 QCKVP 231 (232)
Q Consensus 227 ~C~~~ 231 (232)
+|.+.
T Consensus 160 ~C~a~ 164 (289)
T 3ejj_X 160 VCKTM 164 (289)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99974
No 213
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.80 E-value=5.2e-19 Score=133.38 Aligned_cols=152 Identities=18% Similarity=0.245 Sum_probs=114.7
Q ss_pred CcccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe-------------------------ee-eEEEE
Q psy15206 7 SQVDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR-------------------------LG-RLHLA 60 (232)
Q Consensus 7 ~~~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~-------------------------~~-~~~~~ 60 (232)
+.+..+|.|... +.+..+.+|++++|.|.+.+.|.+.+.|++++.. .| .|+|.
T Consensus 153 ~~~c~~P~i~~~-~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~ 231 (347)
T 2ifg_A 153 NASCGVPTLKVQ-VPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCW 231 (347)
T ss_dssp CTTCCCCEEEEE-CCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEEC
T ss_pred cccCCCCceecc-CCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEE
Confidence 345568999988 7888999999999999999999999999995422 14 67776
Q ss_pred eeee------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe-----------
Q psy15206 61 IPYT------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF----------- 123 (232)
Q Consensus 61 ~~~~------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~----------- 123 (232)
.... .+.|.|..+|.+.. .....|+.+.|.|.+.|.|.|.+.|+++|..+........
T Consensus 232 a~n~~g~~~~~~~l~V~~~P~i~~-----~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~ 306 (347)
T 2ifg_A 232 AENDVGRAEVSVQVNVSFPASVQL-----HTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETV 306 (347)
T ss_dssp CEETTEECCEEECCCCBEEEEEEE-----CCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCC
T ss_pred EEcCCCCEEEEEEEEEcCCCeeee-----ccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcc
Confidence 5222 45566665555411 1234689999999999999999999999988764433221
Q ss_pred eCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEecc
Q psy15206 124 TGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 124 ~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 165 (232)
..+.|.|.++..+|.|.|+|.+.|..|. ....+.+.|..+|
T Consensus 307 ~~~~L~I~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~~~P 347 (347)
T 2ifg_A 307 RHGCLRLNQPTHVNNGNYTLLAANPFGQ-ASASIMAAFMDNP 347 (347)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEECSCCCC
T ss_pred cceEEEECCCCcccCceEEEEEecCCCc-eeeEEEEEecCCC
Confidence 1446999999999999999999999886 5566666665544
No 214
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.79 E-value=2.7e-18 Score=121.34 Aligned_cols=149 Identities=21% Similarity=0.327 Sum_probs=102.4
Q ss_pred CceEeecCCcEEEEeeeccCC--CCeEEEEeCC--ee---eC--------------CCCcEEee------CCeEEECCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NA---IL--------------PNGQTIFT------GSTLQIPRIT 134 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~---~~--------------~~~~~~~~------~~~l~i~~~~ 134 (232)
....+.+|+++.|.|.+.+.+ .+.+.|++.. .. +. ...++... ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 346777899999999998755 5679999853 11 10 11233322 1379999999
Q ss_pred CCCCeEEEEEeEeCCCC--ceeeEEEEEEEe----ccEEEeccceeeeeccCeEEEEEEeecC-CC--CeEEEeeCCEEe
Q psy15206 135 KEDRGAYYCVAQNGIGR--GARRKIEVKVEF----APIVTVQSTRIGQALHHDMDLDCHIEAY-PH--PILYWAKDGEIV 205 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~--~~~~W~~~g~~~ 205 (232)
.+|+|.|.|.+.+..+. .......|.|.. +|.+...+ ...+..|+.++|.|.+.+. |. +.+.|+++|..+
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~ 166 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDI 166 (220)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSC
T ss_pred hhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEec
Confidence 99999999999986432 112234666653 45665544 3345689999999999887 66 689999998643
Q ss_pred c---------CCCeEE----EEEeccccCCceEEEEecC
Q psy15206 206 V---------NDEYHS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 206 ~---------~~~~~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
. .++.|. +.+......|.|.|+|.|.
T Consensus 167 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~ 205 (220)
T 2fbj_H 167 TTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQ 205 (220)
T ss_dssp EEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEE
T ss_pred ceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEE
Confidence 1 223443 5555666678999999874
No 215
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.79 E-value=6.5e-19 Score=124.54 Aligned_cols=145 Identities=18% Similarity=0.351 Sum_probs=99.0
Q ss_pred eEeecCCcEEEEeeeccCCC-----CeEEEEeCCeee-------------CCCCcEEee-------CCeEEECCCCCCCC
Q psy15206 84 SVAKEGQSVQLECHAEGHPI-----PTISWRRENNAI-------------LPNGQTIFT-------GSTLQIPRITKEDR 138 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~~-----~~~~W~~~~~~~-------------~~~~~~~~~-------~~~l~i~~~~~~~~ 138 (232)
..+.+|+.+.|.|.+.+.+. +.+.|++++... ....+.... +.+|.|.+++.+|.
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~ 84 (222)
T 4i0k_A 5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDE 84 (222)
T ss_dssp CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGC
T ss_pred EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccC
Confidence 45668999999999887653 579999986432 111222221 45799999999999
Q ss_pred eEEEEEeEeCCCCceeeEEEEEEEec---cEEEeccceeeeeccCeEEEEEEe-ecCCCCeEEEeeC-CEEecC------
Q psy15206 139 GAYYCVAQNGIGRGARRKIEVKVEFA---PIVTVQSTRIGQALHHDMDLDCHI-EAYPHPILYWAKD-GEIVVN------ 207 (232)
Q Consensus 139 g~y~C~~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~-g~~~~~------ 207 (232)
|.|+|.+.+... ....+.+.|..+ |.+...+ ...+..|+.+.|.|.+ .+.|.+.+.|+++ +..+..
T Consensus 85 G~Y~C~~~~~~~--~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~ 161 (222)
T 4i0k_A 85 GSYTCFVSIQDF--DSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQ 161 (222)
T ss_dssp SCEEEEEEECCC--CCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEE
T ss_pred EEEEEEEEeCCC--ceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeE
Confidence 999999997532 233445555443 5555444 3356789999999999 8999999999994 433321
Q ss_pred ----CCe-EEEEEeccccCCceEEEEecC
Q psy15206 208 ----DEY-HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 208 ----~~~-~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.. ..+.+.++..+|+|.|+|.|.
T Consensus 162 ~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 190 (222)
T 4i0k_A 162 MANERGLFDVHSVLRVVLGANGTYSCLVR 190 (222)
T ss_dssp EECTTSCEEEEEEEEEECCTTCEEEEEEE
T ss_pred EcCCCCeEEEEEEEEEEeCCCCEEEEEEE
Confidence 122 235677788899999999973
No 216
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.79 E-value=9.1e-18 Score=120.48 Aligned_cols=150 Identities=21% Similarity=0.284 Sum_probs=101.0
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeC--------------CeeeCC----CCcEEee-----CCeEEECCCCCCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRRE--------------NNAILP----NGQTIFT-----GSTLQIPRITKED 137 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~--------------~~~~~~----~~~~~~~-----~~~l~i~~~~~~~ 137 (232)
+....+.+|+.+.|.| ..+.+.+.+.|++. +..... ..++... ..+|.|.+++.+|
T Consensus 9 p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 87 (245)
T 4ei6_B 9 PSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALED 87 (245)
T ss_dssp CSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGG
T ss_pred CceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhH
Confidence 4556788999999999 65677789999982 111110 0333322 2279999999999
Q ss_pred CeEEEEEeEeCC---CCceeeEEEEEEE------eccEEEec-cceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEEe
Q psy15206 138 RGAYYCVAQNGI---GRGARRKIEVKVE------FAPIVTVQ-STRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEIV 205 (232)
Q Consensus 138 ~g~y~C~~~~~~---~~~~~~~~~l~v~------~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~~ 205 (232)
.|.|.|.+.+.. .........+.|. .+|.+... +....+..|+.++|.|.+.|. |.+ .+.|+++|..+
T Consensus 88 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l 167 (245)
T 4ei6_B 88 SAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 167 (245)
T ss_dssp CEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred CEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEEC
Confidence 999999998532 1112234456665 35655443 344445569999999999884 444 79999999887
Q ss_pred cC----------------CCeEE----EEEeccccCC-ceEEEEecC
Q psy15206 206 VN----------------DEYHS----ISNFGTSEGT-TGSLQCKVP 231 (232)
Q Consensus 206 ~~----------------~~~~~----~~~~~~~~~d-~g~Y~C~~~ 231 (232)
.. +..+. +.+......| .|.|+|.|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~ 214 (245)
T 4ei6_B 168 HSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQ 214 (245)
T ss_dssp CTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEE
T ss_pred CCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEE
Confidence 53 33343 4444555566 899999974
No 217
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.79 E-value=5.7e-18 Score=117.69 Aligned_cols=148 Identities=26% Similarity=0.345 Sum_probs=108.3
Q ss_pred CeeecCCCcceEeecCCeEEEEEE-ecCCCC-CeEEEEeCcEe---------------------------eeeEEEEeee
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECH-AEGHPI-PTISWRRNFKR---------------------------LGRLHLAIPY 63 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~-~~~~p~-~~~~W~~~~~~---------------------------~~~~~~~~~~ 63 (232)
|.+...++.++.+.+|++++|.|. +.+.|. +.+.|++++.. .|.|.|....
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 87 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSS 87 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEE
T ss_pred CccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEe
Confidence 444444478889999999999999 888888 99999984321 2478887644
Q ss_pred e---------cCceeec-------CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCe
Q psy15206 64 T---------SPEAQVD-------TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGST 127 (232)
Q Consensus 64 ~---------~~~l~v~-------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 127 (232)
. ...+.+. .+|.+.. ......+..|+.+.|.|.+.+.|.+.+.|++++..+..........+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~ 166 (201)
T 3s97_C 88 PSITKSVFSKFIPLIPIPERTTKPYPADIVV-QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAV 166 (201)
T ss_dssp GGGTEEEECCCEEEEEECCSSCCCEEEEEEE-ECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTE
T ss_pred cCCCcchhhcccceeeccccccCCCCCceEe-cCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCE
Confidence 2 1111111 2233332 233667888999999999999999999999999876655444455678
Q ss_pred EEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEE
Q psy15206 128 LQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVE 162 (232)
Q Consensus 128 l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 162 (232)
|.|.++..+|.|.|+|.+.|..|. ....+.+.|.
T Consensus 167 L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 200 (201)
T 3s97_C 167 LKIFNIQLEDEGIYECEAENIRGK-DKHQARIYVQ 200 (201)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred EEEccCChhhCEEEEEEEEecCCc-eeeeEEEEEe
Confidence 999999999999999999998876 4555566553
No 218
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.79 E-value=3.8e-19 Score=125.73 Aligned_cols=149 Identities=17% Similarity=0.195 Sum_probs=104.8
Q ss_pred CceEeecCCcEEEEeeecc-CCCC----eEEEEeCCeeeCC-------------CCcEEe---------eCCeEEECCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEG-HPIP----TISWRRENNAILP-------------NGQTIF---------TGSTLQIPRIT 134 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~-~~~~----~~~W~~~~~~~~~-------------~~~~~~---------~~~~l~i~~~~ 134 (232)
....+.+|+.+.|.|.+.+ .+.+ .+.|++++..... ..+... .+.+|.|.+++
T Consensus 7 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~ 86 (221)
T 3eow_R 7 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLR 86 (221)
T ss_dssp CCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSS
T ss_pred CcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCC
Confidence 3455668999999999854 3333 3999998642211 111111 24589999999
Q ss_pred CCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceeeeeccCeE-EEEEEee-cCCCCeEEEeeCCEEec------
Q psy15206 135 KEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIGQALHHDM-DLDCHIE-AYPHPILYWAKDGEIVV------ 206 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~-~l~C~~~-~~p~~~~~W~~~g~~~~------ 206 (232)
.+|.|.|.|.+.+.........+.|.|..+|.+...+.... ..|+.+ .|.|.+. +.|.+.+.|++++....
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~ 165 (221)
T 3eow_R 87 VEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVP 165 (221)
T ss_dssp CCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEEC
T ss_pred hHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceee
Confidence 99999999999986522256677777888888765544333 578888 5999987 89999999998743221
Q ss_pred --CCC----eEEEEEeccccCCceEEEEecC
Q psy15206 207 --NDE----YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 --~~~----~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
... .-.|.+......|.|.|+|.|.
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~ 196 (221)
T 3eow_R 166 GFLSGTVTVTSLWILVPSSQVDGKQVTCKVE 196 (221)
T ss_dssp CCCBTTBCCEEEEECCCCSCCCCCCEEEEEC
T ss_pred cCCCCcEEEEEEEEEeCCHHHCCCeEEEEEE
Confidence 111 2356667778899999999985
No 219
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.79 E-value=4.3e-20 Score=137.35 Aligned_cols=149 Identities=21% Similarity=0.305 Sum_probs=110.9
Q ss_pred CceEeecCCcEEEEeeeccCC-CCeEEEEeCCeeeC----CCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeE
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP-IPTISWRRENNAIL----PNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRK 156 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~-~~~~~W~~~~~~~~----~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~ 156 (232)
....+.+|+.+.|.|.+.+.+ .+.+.|++++.... ...+....++.|.|.++..+|.|.|+|.+.+..+. ....
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~ 91 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYC-LRIK 91 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCC-CCEE
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceE-EEEE
Confidence 356788999999999998877 67899999986432 12344455678999999999999999999987665 3333
Q ss_pred EEEEEE-eccEEEecc---ceeeeeccCeEEEEEEe------ecCCCCeEEEeeCCEEecCCC------eEEEEEecccc
Q psy15206 157 IEVKVE-FAPIVTVQS---TRIGQALHHDMDLDCHI------EAYPHPILYWAKDGEIVVNDE------YHSISNFGTSE 220 (232)
Q Consensus 157 ~~l~v~-~~p~~~~~~---~~~~~~~g~~~~l~C~~------~~~p~~~~~W~~~g~~~~~~~------~~~~~~~~~~~ 220 (232)
+.+.+. .+|.+...+ ....+..|+++.|.|.+ .|.|.+.+.|+|+|..+.... ...|.+.++..
T Consensus 92 ~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~ 171 (315)
T 1itb_B 92 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAE 171 (315)
T ss_dssp CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCG
T ss_pred EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEecee
Confidence 333332 334332221 23457789999999998 899999999999998874321 22667778888
Q ss_pred CCceEEEEecC
Q psy15206 221 GTTGSLQCKVP 231 (232)
Q Consensus 221 ~d~g~Y~C~~~ 231 (232)
.|+|.|+|.|.
T Consensus 172 ~d~G~Y~C~a~ 182 (315)
T 1itb_B 172 KHRGNYTCHAS 182 (315)
T ss_dssp GGCEEEEEEEE
T ss_pred hhCcEEEEEEE
Confidence 99999999974
No 220
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.79 E-value=1.1e-17 Score=121.45 Aligned_cols=152 Identities=14% Similarity=0.227 Sum_probs=104.9
Q ss_pred CCCceEeecCCcEEEEeeeccCC------CCeEEEEeCC--eee---C---------CCCcEEee----CCeEEECCCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHP------IPTISWRREN--NAI---L---------PNGQTIFT----GSTLQIPRITK 135 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~------~~~~~W~~~~--~~~---~---------~~~~~~~~----~~~l~i~~~~~ 135 (232)
.+....+.+|+++.|.|.+.+.+ .+.+.|++.. ..+ . ...++... ..+|.|.+++.
T Consensus 11 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~ 90 (264)
T 2gjj_A 11 TPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKA 90 (264)
T ss_dssp ECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred cCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCH
Confidence 45567788999999999998876 5679999852 211 0 12233221 23799999999
Q ss_pred CCCeEEEEEeEeCCCCceeeEEEEEEEecc------------------EE-EeccceeeeeccCeEEEEEEeecCCC--C
Q psy15206 136 EDRGAYYCVAQNGIGRGARRKIEVKVEFAP------------------IV-TVQSTRIGQALHHDMDLDCHIEAYPH--P 194 (232)
Q Consensus 136 ~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p------------------~~-~~~~~~~~~~~g~~~~l~C~~~~~p~--~ 194 (232)
+|+|.|.|.+.+..+........|.|..+| .+ ...+....+..|++++|.|.+.+.+. +
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 170 (264)
T 2gjj_A 91 EDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSFTGY 170 (264)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGS
T ss_pred HHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCccCCe
Confidence 999999999987643222233466666542 22 22233346788999999999998874 6
Q ss_pred eEEEeeCC--E---Eec-------------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 195 ILYWAKDG--E---IVV-------------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 195 ~~~W~~~g--~---~~~-------------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+.|+|+. . .+. ....+.|.+.++..+|+|.|.|.+.
T Consensus 171 ~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 237 (264)
T 2gjj_A 171 FINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRS 237 (264)
T ss_dssp EEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEe
Confidence 89999862 1 111 1124577888889999999999874
No 221
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.79 E-value=9.6e-18 Score=120.37 Aligned_cols=152 Identities=20% Similarity=0.279 Sum_probs=101.6
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eee--------------CCCCcEEe-----eCCeEEECCCCCCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAI--------------LPNGQTIF-----TGSTLQIPRITKEDR 138 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~--------------~~~~~~~~-----~~~~l~i~~~~~~~~ 138 (232)
.+....+.+|+.+.|.|.+.+.+.+.+.|++.. ... ....++.. ...+|.|.+++.+|+
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 86 (245)
T 3nfj_J 7 WPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDS 86 (245)
T ss_dssp ECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGC
T ss_pred CCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhC
Confidence 355677889999999999988888899999832 110 00112111 123799999999999
Q ss_pred eEEEEEeEeCC-----CCceeeEEEEEEEe------ccEEEec-cceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEE
Q psy15206 139 GAYYCVAQNGI-----GRGARRKIEVKVEF------APIVTVQ-STRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEI 204 (232)
Q Consensus 139 g~y~C~~~~~~-----~~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~ 204 (232)
|.|.|.+.+.. .........+.|.. +|.+... +....+..|+.+.|.|.+.|. |.+ .+.|+++|..
T Consensus 87 G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~ 166 (245)
T 3nfj_J 87 GFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKE 166 (245)
T ss_dssp EEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred EEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEE
Confidence 99999999832 22122344566654 5666543 333334559999999999985 444 6899999988
Q ss_pred ecC----------------CCeE----EEEEeccccCC-ceEEEEecC
Q psy15206 205 VVN----------------DEYH----SISNFGTSEGT-TGSLQCKVP 231 (232)
Q Consensus 205 ~~~----------------~~~~----~~~~~~~~~~d-~g~Y~C~~~ 231 (232)
+.. +..+ .+.+......| .|.|+|.|.
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~ 214 (245)
T 3nfj_J 167 VHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQ 214 (245)
T ss_dssp ECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEE
T ss_pred CCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEE
Confidence 753 2333 33444444466 679999974
No 222
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.78 E-value=1e-17 Score=121.88 Aligned_cols=151 Identities=21% Similarity=0.269 Sum_probs=101.1
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeC--Ceee------------CC---C-CcEEee-----CCeEEECCCCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRE--NNAI------------LP---N-GQTIFT-----GSTLQIPRITKE 136 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~--~~~~------------~~---~-~~~~~~-----~~~l~i~~~~~~ 136 (232)
.+....+.+|+++.|.|.+. .+.+.+.|++. +... .. . .++... +.+|.|.+++.+
T Consensus 32 ~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 110 (268)
T 3pl6_D 32 TPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERG 110 (268)
T ss_dssp CCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGG
T ss_pred CCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcc
Confidence 45557788999999999986 56678999982 2111 00 0 233222 347999999999
Q ss_pred CCeEEEEEeEeCC-CCceeeEEEEEEEe------ccEEEec-cceeeeeccCeEEEEEEeecCCCC--eEEEeeCCEEec
Q psy15206 137 DRGAYYCVAQNGI-GRGARRKIEVKVEF------APIVTVQ-STRIGQALHHDMDLDCHIEAYPHP--ILYWAKDGEIVV 206 (232)
Q Consensus 137 ~~g~y~C~~~~~~-~~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~g~~~~ 206 (232)
|+|.|.|.+.+.. .........+.|.. +|.+... +....+..|+.++|.|.+.|.+++ .+.|+++|..+.
T Consensus 111 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~ 190 (268)
T 3pl6_D 111 DSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 190 (268)
T ss_dssp GCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEEC
T ss_pred cCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECC
Confidence 9999999998741 11123344566654 5665443 333445569999999999986654 899999998774
Q ss_pred C----------------CCeEEE----EEeccccCC-ceEEEEecC
Q psy15206 207 N----------------DEYHSI----SNFGTSEGT-TGSLQCKVP 231 (232)
Q Consensus 207 ~----------------~~~~~~----~~~~~~~~d-~g~Y~C~~~ 231 (232)
. ++.+.+ .+......| .|.|+|.|.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~ 236 (268)
T 3pl6_D 191 SGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQ 236 (268)
T ss_dssp TTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEE
T ss_pred CCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEE
Confidence 3 233433 333444455 999999874
No 223
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.78 E-value=6.3e-18 Score=118.43 Aligned_cols=148 Identities=22% Similarity=0.353 Sum_probs=107.5
Q ss_pred CeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe-----------------------------------eeeE
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR-----------------------------------LGRL 57 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~-----------------------------------~~~~ 57 (232)
+.|... +.++.+.+|++++|.|.+.+.|.+.+.|++++.. .|.|
T Consensus 2 ~~v~~~-~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y 80 (212)
T 1f97_A 2 GSVYTA-QSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEY 80 (212)
T ss_dssp CEEECS-CSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEE
T ss_pred ceEEec-CCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEE
Confidence 455555 7888999999999999999989999999995422 1467
Q ss_pred EEEeeee--------cCceeecCCcEEecCCCCceEeecCCcEEEEee-eccCCCCeEEEEeCCe-eeCCCCc-------
Q psy15206 58 HLAIPYT--------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECH-AEGHPIPTISWRRENN-AILPNGQ------- 120 (232)
Q Consensus 58 ~~~~~~~--------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~-~~~~~~~~~~W~~~~~-~~~~~~~------- 120 (232)
.|..... .+.|.|..+|..... .....+.+|+.+.|.|. +.+.|.+.+.|++++. .+.....
T Consensus 81 ~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~ 159 (212)
T 1f97_A 81 TCMVSEEGGQNYGEVSIHLTVLVPPSKPTI-SVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMN 159 (212)
T ss_dssp EEEEEETTSSSEEEEEEEEEEEBCCCCCEE-ECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSS
T ss_pred EEEEEccCCCcccEEEEEEEEEcCCCCccc-CCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccC
Confidence 7765331 455666665543321 22246778999999999 7888999999999998 6543221
Q ss_pred --EE--eeCCeEEECCCCCCCCeEEEEEeEeCCCCc-eeeEEEEEEE
Q psy15206 121 --TI--FTGSTLQIPRITKEDRGAYYCVAQNGIGRG-ARRKIEVKVE 162 (232)
Q Consensus 121 --~~--~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v~ 162 (232)
.. ...+.|.|.++..+|.|.|+|.+.|..|.. .+..+.+.|.
T Consensus 160 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 160 SSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp SCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred ceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 11 235689999999999999999999988874 3455566554
No 224
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.78 E-value=1.3e-17 Score=116.69 Aligned_cols=144 Identities=22% Similarity=0.356 Sum_probs=104.3
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEeCcE-------------------------------------------eeee
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK-------------------------------------------RLGR 56 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~-------------------------------------------~~~~ 56 (232)
+.+..+.+|++++|.|...+.+.+.+.|+++.. +.|.
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~ 85 (208)
T 3r4d_A 6 AVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGV 85 (208)
T ss_dssp EESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEE
T ss_pred CccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeE
Confidence 556789999999999998888889999998521 1135
Q ss_pred EEEEeeee-------cCceeecCC---cEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee--
Q psy15206 57 LHLAIPYT-------SPEAQVDTP---PVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT-- 124 (232)
Q Consensus 57 ~~~~~~~~-------~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~-- 124 (232)
|.|..... .+.|.|..+ |.+.. .... +..|+.+.|.|.+.+.+ +.+.|++++..+....+....
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~ 161 (208)
T 3r4d_A 86 YTLDMTDENYRRTQATVRFHVHQPVTQPFLQV-TNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQN 161 (208)
T ss_dssp EEEEEECSSCEEEEEEEEEEEECCCCCCEEEE-SCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETT
T ss_pred EEEEEEcccCceeEEEEEEEeccCCCCCEEec-CCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCC
Confidence 66655222 344555443 33322 2222 67899999999998865 799999999887655554433
Q ss_pred CCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEE
Q psy15206 125 GSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIV 167 (232)
Q Consensus 125 ~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 167 (232)
++.|.|.++..+|.|.|+|.+.|..|...+..+.+.|..+|..
T Consensus 162 ~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~ 204 (208)
T 3r4d_A 162 NSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHH 204 (208)
T ss_dssp TTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC-----
T ss_pred CCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCcc
Confidence 4789999999999999999999999887778888887776653
No 225
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.78 E-value=1.2e-17 Score=119.58 Aligned_cols=150 Identities=17% Similarity=0.262 Sum_probs=100.3
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCC--------------eee---CCCCcEEee-----CCeEEECCCCCCCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRREN--------------NAI---LPNGQTIFT-----GSTLQIPRITKEDR 138 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--------------~~~---~~~~~~~~~-----~~~l~i~~~~~~~~ 138 (232)
+....+.+|+.+.|.|.+.+ +.+.+.|++.. ... ....++... ..+|.|.+++.+|.
T Consensus 9 p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 87 (240)
T 3q5y_A 9 PRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDS 87 (240)
T ss_dssp CSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGC
T ss_pred cceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHC
Confidence 45567889999999999875 66789999821 110 011222221 23799999999999
Q ss_pred eEEEEEeEeC--CCCceeeEEEEEEE------eccEEEec-cceeeeeccCeEEEEEEeec-CCCC-eEEEeeCCEEecC
Q psy15206 139 GAYYCVAQNG--IGRGARRKIEVKVE------FAPIVTVQ-STRIGQALHHDMDLDCHIEA-YPHP-ILYWAKDGEIVVN 207 (232)
Q Consensus 139 g~y~C~~~~~--~~~~~~~~~~l~v~------~~p~~~~~-~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~g~~~~~ 207 (232)
|.|.|.+.+. ..........+.|. .+|.+... +....+..|+.+.|.|.+.| .|.+ .+.|+++|..+..
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~ 167 (240)
T 3q5y_A 88 AMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHS 167 (240)
T ss_dssp EEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred EEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcC
Confidence 9999999732 11112233455555 45665543 33444556999999999988 5555 7999999988753
Q ss_pred C------------CeEE----EEEeccccCC-ceEEEEecC
Q psy15206 208 D------------EYHS----ISNFGTSEGT-TGSLQCKVP 231 (232)
Q Consensus 208 ~------------~~~~----~~~~~~~~~d-~g~Y~C~~~ 231 (232)
. ..+. +.+......| .|.|+|.|.
T Consensus 168 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~ 208 (240)
T 3q5y_A 168 GVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQ 208 (240)
T ss_dssp TEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEE
T ss_pred cEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEE
Confidence 2 2333 5555555667 679999984
No 226
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.78 E-value=4.8e-18 Score=120.41 Aligned_cols=149 Identities=21% Similarity=0.321 Sum_probs=100.9
Q ss_pred CceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eeeC-----------------CCCcEEee------CCeEEECCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAIL-----------------PNGQTIFT------GSTLQIPRIT 134 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~-----------------~~~~~~~~------~~~l~i~~~~ 134 (232)
....+.+|+++.|.|.+.+.+ .+.+.|++.. ..+. ...++... ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR 87 (225)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC
Confidence 345678999999999998765 5789999853 2110 11233322 2479999999
Q ss_pred CCCCeEEEEEeEeCCC-----C--ceeeEEEEEEEe----ccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEeeC
Q psy15206 135 KEDRGAYYCVAQNGIG-----R--GARRKIEVKVEF----APIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWAKD 201 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~-----~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~ 201 (232)
.+|.|.|.|.+.+..+ . .......|.|.. +|.+........+..|+.+.|.|.+.|. |.+ .+.|+++
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 167 (225)
T 1op3_H 88 VEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 167 (225)
T ss_dssp GGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTT
T ss_pred hhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecC
Confidence 9999999999998653 1 111345666664 4555443322235679999999999886 766 8999998
Q ss_pred CEEe---------cCCCeE----EEEEeccccCCceEEEEecC
Q psy15206 202 GEIV---------VNDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 202 g~~~---------~~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
|..+ ..++.+ .+.+......| |.|+|.|.
T Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~ 209 (225)
T 1op3_H 168 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 209 (225)
T ss_dssp SCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEE
T ss_pred CCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEE
Confidence 8642 122333 24555666567 99999974
No 227
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.78 E-value=2.5e-18 Score=121.63 Aligned_cols=148 Identities=20% Similarity=0.334 Sum_probs=100.4
Q ss_pred ceEeecCCcEEEEeeeccCC--CCeEEEEeCC--ee---e---C-------------CCCcEEee------CCeEEECCC
Q psy15206 83 LSVAKEGQSVQLECHAEGHP--IPTISWRREN--NA---I---L-------------PNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~---~---~-------------~~~~~~~~------~~~l~i~~~ 133 (232)
...+.+|+.+.|.|.+.+.+ .+.+.|++.. .. + . ...++... ..+|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTL 88 (222)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred ceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcC
Confidence 34677899999999998765 5689999853 11 0 0 01233221 237999999
Q ss_pred CCCCCeEEEEEeEeCCCC----ceeeEEEEEEEe----ccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCE
Q psy15206 134 TKEDRGAYYCVAQNGIGR----GARRKIEVKVEF----APIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGE 203 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~~----~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~ 203 (232)
+.+|.|.|.|.+.+..+. .......+.|.. +|.+...+....+..|+.+.|.|.+.|. |.| .+.|+++|.
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 168 (222)
T 1q9r_B 89 RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 168 (222)
T ss_dssp CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCCe
Confidence 999999999999986431 122234555543 5666554433345679999999999985 888 999999986
Q ss_pred Eec--------CCCeE----EEEEeccccCCceEEEEecC
Q psy15206 204 IVV--------NDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 204 ~~~--------~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+. .++.+ .|.+......| |.|+|.|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~ 207 (222)
T 1q9r_B 169 SSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVA 207 (222)
T ss_dssp CTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEE
T ss_pred EcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEE
Confidence 432 12233 24555666678 99999974
No 228
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.77 E-value=3.8e-18 Score=119.64 Aligned_cols=147 Identities=22% Similarity=0.353 Sum_probs=99.3
Q ss_pred CceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eeeC----------------CCCcEEee------CCeEEECCCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAIL----------------PNGQTIFT------GSTLQIPRITK 135 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~----------------~~~~~~~~------~~~l~i~~~~~ 135 (232)
....+.+|+++.|.|.+.+.+ .+.+.|+++. .... ...++... ..+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 87 (210)
T 3d9a_H 8 GPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTT 87 (210)
T ss_dssp SCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCc
Confidence 345677899999999998765 3789999852 2210 12233221 12899999999
Q ss_pred CCCeEEEEEeEeCCCCceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEEec---
Q psy15206 136 EDRGAYYCVAQNGIGRGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEIVV--- 206 (232)
Q Consensus 136 ~~~g~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~~~--- 206 (232)
+|.|.|.|.+.+... ......+.|. .+|.+...+....+..|+.+.|.|.+.|. |.| .+.|+++|..+.
T Consensus 88 ~D~G~Y~C~~~~~~~--~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 165 (210)
T 3d9a_H 88 EDTATYYCANWDGDY--WGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 165 (210)
T ss_dssp GGCEEEEEEETTSSC--BCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred ccCEEEEEEEecCcc--cccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE
Confidence 999999999987531 1122455554 35666554433456789999999999887 888 999999986421
Q ss_pred -----CCCeE----EEEEeccccCCceEEEEecC
Q psy15206 207 -----NDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 -----~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.++.+ .+.+......| |.|+|.|.
T Consensus 166 ~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~ 198 (210)
T 3d9a_H 166 FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVA 198 (210)
T ss_dssp CCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEE
T ss_pred cCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEE
Confidence 11222 24555555555 99999974
No 229
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.77 E-value=3e-17 Score=122.78 Aligned_cols=157 Identities=19% Similarity=0.335 Sum_probs=107.2
Q ss_pred cEEecCCCCceEeecCCcEEEEeeeccC----CCCeEEEEeCCe--e-------------e--CCCCcEEe-----eCCe
Q psy15206 74 PVILNNSPQLSVAKEGQSVQLECHAEGH----PIPTISWRRENN--A-------------I--LPNGQTIF-----TGST 127 (232)
Q Consensus 74 p~~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~~~~W~~~~~--~-------------~--~~~~~~~~-----~~~~ 127 (232)
|......+....+.+|+.+.|.|.+.+. +.+.+.|++++. . . ....+... .+.+
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 93 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGT 93 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCC
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCce
Confidence 3333335566788899999999998775 344699999541 1 1 11122222 2457
Q ss_pred EEECCCCCCCCeEEEEEeEe-CCCCceeeEEEEEEEeccEEEe--ccceeeeecc---CeEEEEEE-eecCCCCeEEEee
Q psy15206 128 LQIPRITKEDRGAYYCVAQN-GIGRGARRKIEVKVEFAPIVTV--QSTRIGQALH---HDMDLDCH-IEAYPHPILYWAK 200 (232)
Q Consensus 128 l~i~~~~~~~~g~y~C~~~~-~~~~~~~~~~~l~v~~~p~~~~--~~~~~~~~~g---~~~~l~C~-~~~~p~~~~~W~~ 200 (232)
|.|.+++.+|.|.|.|.+.+ ..+. ....+.+.|..+|.+.. .+....+..| +.+.|.|. +.+.|.+.+.|++
T Consensus 94 L~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~ 172 (331)
T 3u83_A 94 IRLSRLELEDEGVYICEFATFPTGN-RESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWET 172 (331)
T ss_dssp EEECSCCGGGCEEEEEEEEEETTEE-EEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEE
T ss_pred EEEcccCcccCcEEEEEEEecCCCc-cEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEc
Confidence 99999999999999999554 4443 66778888888887643 4555667777 77999998 8899999999999
Q ss_pred C--CEEe-----cCCCeE----EEEEeccccCCceEEEEecC
Q psy15206 201 D--GEIV-----VNDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 201 ~--g~~~-----~~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+ +... ..+..+ .+.+..+...|+|.|+|.|.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 214 (331)
T 3u83_A 173 RLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVN 214 (331)
T ss_dssp SSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEE
T ss_pred CCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEe
Confidence 5 3221 122322 35555667899999999874
No 230
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.77 E-value=1.1e-17 Score=121.59 Aligned_cols=152 Identities=14% Similarity=0.196 Sum_probs=100.7
Q ss_pred CCCceEeecCCcEEEEeeeccCC-----CCeEEEEeCC--eee---C---------CCCcEEee----CCeEEECCCCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHP-----IPTISWRREN--NAI---L---------PNGQTIFT----GSTLQIPRITKE 136 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~-----~~~~~W~~~~--~~~---~---------~~~~~~~~----~~~l~i~~~~~~ 136 (232)
.+....+.+|+++.|.|.+.+.+ .+.+.|++.. ..+ . ...++... ..+|.|.+++.+
T Consensus 21 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 100 (268)
T 1x9q_A 21 TPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAE 100 (268)
T ss_dssp ECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChh
Confidence 35556778999999999998876 4689999853 211 0 12233221 237999999999
Q ss_pred CCeEEEEEeEeCCCCceeeEEEEEEEeccE-----------------------EEeccceeeeeccCeEEEEEEeecCCC
Q psy15206 137 DRGAYYCVAQNGIGRGARRKIEVKVEFAPI-----------------------VTVQSTRIGQALHHDMDLDCHIEAYPH 193 (232)
Q Consensus 137 ~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~-----------------------~~~~~~~~~~~~g~~~~l~C~~~~~p~ 193 (232)
|+|.|.|.+.+..+........|.|...+. ....+....+..|++++|.|.+.+.+.
T Consensus 101 DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~ 180 (268)
T 1x9q_A 101 DLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTF 180 (268)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCG
T ss_pred HCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCccc
Confidence 999999999886432122233454443211 122344567888999999999998764
Q ss_pred --CeEEEeeC--CEE---ec----------------CC-----------CeEEEEEeccccCCceEEEEecC
Q psy15206 194 --PILYWAKD--GEI---VV----------------ND-----------EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 194 --~~~~W~~~--g~~---~~----------------~~-----------~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.+.|+|+ |.. +. .. ....|.+.++..+|+|.|.|.+.
T Consensus 181 ~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 252 (268)
T 1x9q_A 181 GHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGA 252 (268)
T ss_dssp GGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred cccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEc
Confidence 68999985 221 10 01 13567888888999999999874
No 231
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.77 E-value=1.5e-17 Score=116.32 Aligned_cols=143 Identities=17% Similarity=0.238 Sum_probs=98.0
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecC-CCCCeEEEEeCcEee-----------------------------eeEEEEe
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEG-HPIPTISWRRNFKRL-----------------------------GRLHLAI 61 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~-~p~~~~~W~~~~~~~-----------------------------~~~~~~~ 61 (232)
.|.|... .++.+.+|+.+.|.|.+.. .|.+.++|++++..+ |.|+|..
T Consensus 3 ~p~~~~~--~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a 80 (207)
T 3rbs_A 3 DPFTKSE--LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQL 80 (207)
T ss_dssp ---CCEE--EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEE
T ss_pred CCeeecC--CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEE
Confidence 4666543 5688999999999999974 799999999965543 2444422
Q ss_pred eee----cCcee----------------e-----cCCcEEecCCCCceEeecCCcEEEEeeeccC-CCCeEEEEeCCeee
Q psy15206 62 PYT----SPEAQ----------------V-----DTPPVILNNSPQLSVAKEGQSVQLECHAEGH-PIPTISWRRENNAI 115 (232)
Q Consensus 62 ~~~----~~~l~----------------v-----~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~~~~~ 115 (232)
... ...+. + ..+|.+... . ...+.+|+.+.|.|.+.|. |.|.+.|++++..+
T Consensus 81 ~Ng~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l 158 (207)
T 3rbs_A 81 QDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY-L-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREI 158 (207)
T ss_dssp EETTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEE-E-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred ECCCeEEEEEEEEEccchhhhcccccccccccccCCCCceEec-C-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEEC
Confidence 110 00100 0 024544331 1 3567789999999999998 89999999999988
Q ss_pred CCCCcEEee--CCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEE
Q psy15206 116 LPNGQTIFT--GSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEV 159 (232)
Q Consensus 116 ~~~~~~~~~--~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 159 (232)
....+.... ...|.|.++..+|.|.|+|.+.|..|. ......|
T Consensus 159 ~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~L 203 (207)
T 3rbs_A 159 SVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGK-DKSRLKL 203 (207)
T ss_dssp CCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEE-EEEEEEE
T ss_pred CCCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCE-EEEEEEE
Confidence 654433222 236999999999999999999998886 3344443
No 232
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.77 E-value=3.7e-18 Score=128.58 Aligned_cols=149 Identities=20% Similarity=0.355 Sum_probs=101.8
Q ss_pred CCceEeecCCcEEEEeeeccCC--CCeEEEEeC--CeeeC-----------------CCCcEEee------CCeEEECCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP--IPTISWRRE--NNAIL-----------------PNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~--~~~~~-----------------~~~~~~~~------~~~l~i~~~ 133 (232)
+....+.+|+.+.|.|.+.+.+ .+.+.|+++ +..+. ...++... ..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 7 SGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 3446778999999999998763 567999986 32220 11233322 137999999
Q ss_pred CCCCCeEEEEEeEeCCCCceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecC-CC-CeEEEeeCCEEe--
Q psy15206 134 TKEDRGAYYCVAQNGIGRGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAY-PH-PILYWAKDGEIV-- 205 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~g~~~-- 205 (232)
+.+|.|.|.|.+.+..+. ......|.|. .+|.+...+....+..|+.+.|.|.+.|. |. +.+.|+|+|..+
T Consensus 87 ~~~D~G~Y~C~~~n~~~~-~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~ 165 (344)
T 1za6_B 87 RSEDTAVYFCTRSLNMAY-WGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGV 165 (344)
T ss_dssp CGGGCEEEEEEETTTTCE-ECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTE
T ss_pred CcccCEEEEEEEecCcce-ecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCce
Confidence 999999999999884322 2234566665 35566544433446789999999999987 54 689999998642
Q ss_pred -------cCCCeE----EEEEeccccCCceEEEEecC
Q psy15206 206 -------VNDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 206 -------~~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..++.+ .|.+......| |.|+|.|.
T Consensus 166 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~ 201 (344)
T 1za6_B 166 HTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 201 (344)
T ss_dssp EECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEE
T ss_pred eECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEE
Confidence 122333 34555555566 99999974
No 233
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.77 E-value=3.7e-18 Score=121.19 Aligned_cols=150 Identities=24% Similarity=0.408 Sum_probs=96.1
Q ss_pred CCceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eee------C-----------CCCcEEee------CCeEEECCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAI------L-----------PNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~------~-----------~~~~~~~~------~~~l~i~~~ 133 (232)
+....+.+|+++.|.|.+.+.+ .+.+.|++.. ..+ . ...++... ..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (227)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC
Confidence 4456778999999999998766 5789999864 211 0 01233221 247999999
Q ss_pred CCCCCeEEEEEeEeCCCCceeeEEEEEEEe----ccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEEec-
Q psy15206 134 TKEDRGAYYCVAQNGIGRGARRKIEVKVEF----APIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEIVV- 206 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~~~- 206 (232)
+.+|.|.|.|.+.+...........|.|.. +|.+........+..|+.++|.|.+.|. |.+ .+.|+++|..+.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~ 166 (227)
T 1mju_H 87 TSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGV 166 (227)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTE
T ss_pred CcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCc
Confidence 999999999999885321112234666653 4565544333345679999999999986 766 899999986531
Q ss_pred --C-----CCeE----EEEEeccccCCceEEEEecC
Q psy15206 207 --N-----DEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 --~-----~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
. .+.+ .+.+......| |.|+|.|.
T Consensus 167 ~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~ 201 (227)
T 1mju_H 167 HTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVA 201 (227)
T ss_dssp EECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEE
T ss_pred EECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEE
Confidence 0 1222 34445555556 99999974
No 234
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.77 E-value=2.1e-17 Score=114.84 Aligned_cols=135 Identities=19% Similarity=0.267 Sum_probs=94.0
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe--------------------------eeeEEEEeee
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR--------------------------LGRLHLAIPY 63 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~--------------------------~~~~~~~~~~ 63 (232)
..+|.|... |. ..+.+|++++|.|.+.+.|. .+.|+|++.. .|.|+|....
T Consensus 3 ~~~P~i~~~-p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 3 LPKPTLWAE-PG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCCCEEEEE-SC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeEecc-CC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEEC
Confidence 468999877 44 48999999999999998765 7999995432 2578887632
Q ss_pred e---------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcE---Ee---eC
Q psy15206 64 T---------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQT---IF---TG 125 (232)
Q Consensus 64 ~---------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~---~~---~~ 125 (232)
. .+.|.|.. +|.+.. .+ ...+.+|+.+.|.|.+.+. .+.+.|++++..+...... .. ..
T Consensus 80 ~~~g~~~~s~~~~l~V~~~~~~p~i~~-~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 156 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTGAYIKPTLSA-QP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSR 156 (198)
T ss_dssp TTTEECCCCCCEEEEEECSSCCCEEEE-ES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCE
T ss_pred CCCCcccCCccEEEEEcccccCCcccc-CC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcce
Confidence 1 34456654 233322 22 2467789999999999887 7799999998876432211 11 13
Q ss_pred CeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 126 STLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 126 ~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
..|.|.++..+|.|.|+|.+.|..+
T Consensus 157 ~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 157 AIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EEEEECCCCTTSCEEEEEEEECTTS
T ss_pred eEEEecccCcccCeEEEEEEEeCCC
Confidence 6799999999999999999998754
No 235
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.77 E-value=1.2e-17 Score=118.07 Aligned_cols=148 Identities=21% Similarity=0.420 Sum_probs=99.1
Q ss_pred CceEeecCCcEEEEeeeccCC--CCeEEEEeCCe--ee------C-------------CCCcEEee------CCeEEECC
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP--IPTISWRRENN--AI------L-------------PNGQTIFT------GSTLQIPR 132 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~~--~~------~-------------~~~~~~~~------~~~l~i~~ 132 (232)
....+.+|+++.|.|.+.+.+ .+.+.|++... .. . ...++... ..+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 87 (221)
T 3m8o_H 8 GGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNS 87 (221)
T ss_dssp SCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECC
Confidence 345677899999999997643 56799997431 11 0 01222221 12599999
Q ss_pred CCCCCCeEEEEEeEeCCC-CceeeEEEEEEE----eccEEE-eccceeeeeccCeEEEEEEeec-CCC-C-eEEEeeCCE
Q psy15206 133 ITKEDRGAYYCVAQNGIG-RGARRKIEVKVE----FAPIVT-VQSTRIGQALHHDMDLDCHIEA-YPH-P-ILYWAKDGE 203 (232)
Q Consensus 133 ~~~~~~g~y~C~~~~~~~-~~~~~~~~l~v~----~~p~~~-~~~~~~~~~~g~~~~l~C~~~~-~p~-~-~~~W~~~g~ 203 (232)
++.+|+|.|.|.+.+... ........+.|. .+|.+. ..+... ..|+.++|.|.+.+ .|. + .+.|+++|.
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~ 165 (221)
T 3m8o_H 88 LKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSESGQ 165 (221)
T ss_dssp CCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCCST
T ss_pred CCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEECCE
Confidence 999999999999987531 212333455554 345554 233322 68999999999988 665 3 899999986
Q ss_pred Ee----------cCCCeEE----EEEeccccCCceEEEEecC
Q psy15206 204 IV----------VNDEYHS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 204 ~~----------~~~~~~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+ ..++.+. +.+......|.|.|+|.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~ 207 (221)
T 3m8o_H 166 GVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVK 207 (221)
T ss_dssp TCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEE
T ss_pred ECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEE
Confidence 54 2334443 5566667789999999974
No 236
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.77 E-value=1.4e-17 Score=120.83 Aligned_cols=138 Identities=17% Similarity=0.259 Sum_probs=104.7
Q ss_pred EeecCCcEEEEeeecc-CCCC--eEEEEeCCeeeCCCCcEEeeCCeEEECCC---CCCCCe--EEEEEeEeCCCCceeeE
Q psy15206 85 VAKEGQSVQLECHAEG-HPIP--TISWRRENNAILPNGQTIFTGSTLQIPRI---TKEDRG--AYYCVAQNGIGRGARRK 156 (232)
Q Consensus 85 ~~~~g~~~~l~C~~~~-~~~~--~~~W~~~~~~~~~~~~~~~~~~~l~i~~~---~~~~~g--~y~C~~~~~~~~~~~~~ 156 (232)
.+.+|+.+.|.|.+.+ .|.+ .+.|++++..+.. .....+..+.+..+ ...|.| .|+|.+.+..+. ....
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~--~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~-~~~~ 90 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQS-QETL 90 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC--EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEE-EEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc--eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCC-cEEE
Confidence 5778999999999988 7766 8999999987643 33344556666655 777887 499999998766 5567
Q ss_pred EEEEEEe--ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC-CCeEEEEEeccccCCceEEEEecC
Q psy15206 157 IEVKVEF--APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN-DEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 157 ~~l~v~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~-~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+.|.. +|.+. +....+.+|+.+.|.|.+. |.+.+.| +|..+.. ..+..+.+......|+|.|+|.|.
T Consensus 91 ~~l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~ 162 (265)
T 2oz4_A 91 QTVTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSAT 162 (265)
T ss_dssp EEEEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCSSEECCEEECCGGGTTEEEEEEEE
T ss_pred EEEEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCCCcEEEEEccccccCCceEEEEEE
Confidence 7788875 33443 3455677899999999998 8889999 7776643 345556677778899999999983
No 237
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.77 E-value=7.3e-18 Score=117.50 Aligned_cols=150 Identities=15% Similarity=0.208 Sum_probs=99.8
Q ss_pred eecCCCcce-EeecCCeEEEEEEecCCCCCeEEEEeCc------E------------------eeeeEEEEeeee-----
Q psy15206 15 ILNNSTQLS-VAKEGQSVQLECHAEGHPIPTISWRRNF------K------------------RLGRLHLAIPYT----- 64 (232)
Q Consensus 15 i~~~~~~~~-~~~~G~~v~l~C~~~~~p~~~~~W~~~~------~------------------~~~~~~~~~~~~----- 64 (232)
+... |.+. .+.+|++++|.|.+.|.|.+.+.|++.. . +.|.|.|.....
T Consensus 3 v~i~-p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~ 81 (202)
T 1vca_A 3 IETT-PESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLE 81 (202)
T ss_dssp EEEE-SSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEE
T ss_pred EEEC-CCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEe
Confidence 4444 4444 4559999999999999899999999831 0 113566655322
Q ss_pred -cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCC-C--CeEEEEeCCeeeCCCCc--------EEeeCCeEEECC
Q psy15206 65 -SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHP-I--PTISWRRENNAILPNGQ--------TIFTGSTLQIPR 132 (232)
Q Consensus 65 -~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~--~~~~W~~~~~~~~~~~~--------~~~~~~~l~i~~ 132 (232)
.+.|.|..+|......+. ..+.+|+.+.|.|.+.+.+ . +.+.|++++..+..... .......|.|..
T Consensus 82 ~~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~ 160 (202)
T 1vca_A 82 KGIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTP 160 (202)
T ss_dssp EEEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECC
T ss_pred eEEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEe
Confidence 556777665532221222 4577899999999998753 3 36899999986532110 011223567888
Q ss_pred CCCCCCeEEEEEeEeCCCCc------eeeEEEEEEEeccE
Q psy15206 133 ITKEDRGAYYCVAQNGIGRG------ARRKIEVKVEFAPI 166 (232)
Q Consensus 133 ~~~~~~g~y~C~~~~~~~~~------~~~~~~l~v~~~p~ 166 (232)
...+|.|.|+|.+.|..+.. ....+.|.|.++|.
T Consensus 161 ~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 161 VIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred eeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 88889999999999976542 34567778888775
No 238
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.77 E-value=4.9e-18 Score=124.98 Aligned_cols=151 Identities=17% Similarity=0.359 Sum_probs=104.5
Q ss_pred CCceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eeeC-----------------CCCcEEee------CCeEEECCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAIL-----------------PNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~-----------------~~~~~~~~------~~~l~i~~~ 133 (232)
+....+.+|+++.|.|.+.+.+ .+.+.|++.. ..+. ...++... ..+|.|.++
T Consensus 29 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 108 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSL 108 (291)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSC
T ss_pred CCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcC
Confidence 3456788999999999998765 4689999853 1110 01122111 247999999
Q ss_pred CCCCCeEEEEEeEeCC-CCc---eeeEEEEEEEe----------------ccEEEeccceeeeeccCeEEEEEEeecCCC
Q psy15206 134 TKEDRGAYYCVAQNGI-GRG---ARRKIEVKVEF----------------APIVTVQSTRIGQALHHDMDLDCHIEAYPH 193 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~-~~~---~~~~~~l~v~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 193 (232)
+.+|+|.|.|.+.+.. +.. ......+.|.. ++.+...+....+.+|++++|.|.+.+.+.
T Consensus 109 ~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~ 188 (291)
T 2gki_A 109 TSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLF 188 (291)
T ss_dssp CGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCE
T ss_pred CHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCccc
Confidence 9999999999999863 211 11233555554 233444566677889999999999998887
Q ss_pred C------eEEEeeC--CE---Eec------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 194 P------ILYWAKD--GE---IVV------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 194 ~------~~~W~~~--g~---~~~------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+ .+.|+|+ |. .+. ....+.|.+.++..+|+|.|+|.+.
T Consensus 189 ~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 255 (291)
T 2gki_A 189 NSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQS 255 (291)
T ss_dssp ETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred cccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEc
Confidence 6 8999996 22 111 1123568888899999999999874
No 239
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.77 E-value=1e-17 Score=118.27 Aligned_cols=149 Identities=21% Similarity=0.398 Sum_probs=100.2
Q ss_pred CceEeecCCcEEEEeeeccCC--CCeEEEEeCC--ee---e---CC-------------CCcEEee------CCeEEECC
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NA---I---LP-------------NGQTIFT------GSTLQIPR 132 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~---~---~~-------------~~~~~~~------~~~l~i~~ 132 (232)
....+.+|+++.|.|.+.+.+ .+.+.|++++ .. + .. ..++... ..+|.|.+
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (220)
T 1pz5_B 8 GGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNN 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEcc
Confidence 445777899999999998765 5789999853 11 1 00 1233221 12799999
Q ss_pred CCCCCCeEEEEEeEeCCCCc--eeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEE
Q psy15206 133 ITKEDRGAYYCVAQNGIGRG--ARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEI 204 (232)
Q Consensus 133 ~~~~~~g~y~C~~~~~~~~~--~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~ 204 (232)
++.+|.|.|.|.+.+..+.. ......+.|. .+|.+...+....+..|+.+.|.|.+.|. |.| .+.|++++..
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 167 (220)
T 1pz5_B 88 LRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALS 167 (220)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCC
T ss_pred CCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCcc
Confidence 99999999999999864321 1133456665 35666554433445689999999999987 888 9999998762
Q ss_pred -----ec---CCCeE----EEEEeccccCCceEEEEecC
Q psy15206 205 -----VV---NDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 205 -----~~---~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.. ..+.+ .+.+......| |.|+|.|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~ 205 (220)
T 1pz5_B 168 SGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVA 205 (220)
T ss_dssp TTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEE
T ss_pred cceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEE
Confidence 11 11233 23444555445 99999974
No 240
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.77 E-value=2.8e-17 Score=115.18 Aligned_cols=138 Identities=19% Similarity=0.347 Sum_probs=99.5
Q ss_pred eecCCeEEEEEEecC-CCCCeEEEEeCcEee---------------------------eeEEEEeeee------cCceee
Q psy15206 25 AKEGQSVQLECHAEG-HPIPTISWRRNFKRL---------------------------GRLHLAIPYT------SPEAQV 70 (232)
Q Consensus 25 ~~~G~~v~l~C~~~~-~p~~~~~W~~~~~~~---------------------------~~~~~~~~~~------~~~l~v 70 (232)
.-+|+.+.|.|.+.+ .|.+.+.|++++..+ |.|.|..... .+.|.+
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v 93 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSG 93 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECH
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEE
Confidence 346788899999987 458899999965432 3455544221 222322
Q ss_pred cC--------------------CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeC-----
Q psy15206 71 DT--------------------PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTG----- 125 (232)
Q Consensus 71 ~~--------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~----- 125 (232)
.. .|......+....+..|+.+.|.|.+.+.|.+.+.|++++..+....+.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~ 173 (212)
T 2r15_A 94 QAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRT 173 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTE
T ss_pred eeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCE
Confidence 21 33344334556788899999999999999999999999999887655544332
Q ss_pred CeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEe
Q psy15206 126 STLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEF 163 (232)
Q Consensus 126 ~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 163 (232)
..|.|.++..+|.|.|+|.+.|..|. ....+.+.|..
T Consensus 174 ~~L~i~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~~ 210 (212)
T 2r15_A 174 AYFTINGVSTADSGKYGLVVKNKYGS-ETSDFTVSVFI 210 (212)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEEEC
T ss_pred EEEEEcCcchHHCeEEEEEEEcCCCc-EEEEEEEEEEc
Confidence 28999999999999999999998876 55666666653
No 241
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.77 E-value=9.1e-19 Score=124.63 Aligned_cols=151 Identities=13% Similarity=0.173 Sum_probs=98.3
Q ss_pred CCCceEeecCCcEEEEeeeccC-CC-C-eEEEEeCCeee-CCCCcEE--------eeCCeEEECCCCCCCCeEEEEEeEe
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGH-PI-P-TISWRRENNAI-LPNGQTI--------FTGSTLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~-~~-~-~~~W~~~~~~~-~~~~~~~--------~~~~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+....+..|+.+.|.|.+.+. |. + .+.|+++|..+ ....... ...+.|.|.++..+|.|.|+|.+.+
T Consensus 19 ~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~ 98 (231)
T 2w59_A 19 PPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQH 98 (231)
T ss_dssp CCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEEC
T ss_pred CcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEc
Confidence 4444556689999999999884 53 4 89999988766 2211111 1223699999999999999999998
Q ss_pred CCCCceeeEEEEEE----EeccEEEeccceeeeeccCeEEEEEEeecCCC--CeEEEeeCCEEecCC-------------
Q psy15206 148 GIGRGARRKIEVKV----EFAPIVTVQSTRIGQALHHDMDLDCHIEAYPH--PILYWAKDGEIVVND------------- 208 (232)
Q Consensus 148 ~~~~~~~~~~~l~v----~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~g~~~~~~------------- 208 (232)
..+. ......+.+ ..+|.+.+.+.......+..+.|.|.+.|+++ +.|.|+|||..+...
T Consensus 99 ~~~~-~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~ 177 (231)
T 2w59_A 99 EELP-LPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERT 177 (231)
T ss_dssp TTCS-SCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTT
T ss_pred CCCC-CceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCccc
Confidence 7643 212222221 14666655432222234567999999998633 589999999876321
Q ss_pred --------CeEE----EEEeccccCCceEEEEecC
Q psy15206 209 --------EYHS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 209 --------~~~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
..|. +.+......|.|.|+|.|.
T Consensus 178 ~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~ 212 (231)
T 2w59_A 178 ANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAV 212 (231)
T ss_dssp SCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEE
T ss_pred ccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEE
Confidence 2222 2333444467999999984
No 242
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.77 E-value=9.3e-17 Score=110.13 Aligned_cols=138 Identities=21% Similarity=0.406 Sum_probs=100.9
Q ss_pred eEeecCCeEEEEEEecCCCCC--eEEEEeCcEee--------------------eeEEEEeee---ecCceeecCCcEEe
Q psy15206 23 SVAKEGQSVQLECHAEGHPIP--TISWRRNFKRL--------------------GRLHLAIPY---TSPEAQVDTPPVIL 77 (232)
Q Consensus 23 ~~~~~G~~v~l~C~~~~~p~~--~~~W~~~~~~~--------------------~~~~~~~~~---~~~~l~v~~~p~~~ 77 (232)
..+.+|++++|.|.+.+.+.+ .+.|++++..+ |.|.|.... ..+.|.|..+|.+.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~~~~d~G~Y~C~~~n~~~~~~~l~V~~~P~~~ 87 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVK 87 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEECGGGCCEEEEEEEESTTSCEEEEEECCSCCCE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccCCcEEEEEechhhCeEEEEEEECCcCcEEEEEEecCCcee
Confidence 567899999999999876655 99999954332 467776542 25567777777665
Q ss_pred cCCCCceEeecCCcEEEEeeeccCC-CCeEEEEe---CCeeeCCC---CcEEee----CCeEEECCCC-CCCCeEEEEEe
Q psy15206 78 NNSPQLSVAKEGQSVQLECHAEGHP-IPTISWRR---ENNAILPN---GQTIFT----GSTLQIPRIT-KEDRGAYYCVA 145 (232)
Q Consensus 78 ~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~W~~---~~~~~~~~---~~~~~~----~~~l~i~~~~-~~~~g~y~C~~ 145 (232)
. .+....+.+|+.+.|.|.+.+.| .+.+.|++ ++...... .++... ...|.|.++. ..|.|.|.|.+
T Consensus 88 ~-~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 166 (184)
T 3b5h_A 88 A-VKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNG 166 (184)
T ss_dssp E-SCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEE
T ss_pred e-cCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEE
Confidence 4 34556788899999999999988 78999999 55444321 222221 2379999999 89999999999
Q ss_pred EeCCCCceeeEEEEEEE
Q psy15206 146 QNGIGRGARRKIEVKVE 162 (232)
Q Consensus 146 ~~~~~~~~~~~~~l~v~ 162 (232)
.|..|. ....+.|.|.
T Consensus 167 ~N~~g~-~~~~~~l~V~ 182 (184)
T 3b5h_A 167 TSSKGS-DQAIITLRVR 182 (184)
T ss_dssp EETTEE-EEEEEEEEEC
T ss_pred EeCCCc-ceEEEEEEEe
Confidence 998876 4445666553
No 243
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.77 E-value=1e-18 Score=124.89 Aligned_cols=146 Identities=14% Similarity=0.208 Sum_probs=98.6
Q ss_pred eecCCcEEEEeeeccC---CCC-eEEEEeCCeeeCCCC---------cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCc
Q psy15206 86 AKEGQSVQLECHAEGH---PIP-TISWRRENNAILPNG---------QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRG 152 (232)
Q Consensus 86 ~~~g~~~~l~C~~~~~---~~~-~~~W~~~~~~~~~~~---------~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~ 152 (232)
+.+|+.+.|.|.+.+. |.+ .+.|++++..+.... ......+.|.|.++..+|.|.|.|.+.+..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 5689999999999876 665 899999886653210 111123479999999999999999999876642
Q ss_pred -eeeEEEE--EEEeccEEEeccceeeeeccCeEEEEEEeecC-CC-CeEEEeeCCEEecC----------CCeEEEE---
Q psy15206 153 -ARRKIEV--KVEFAPIVTVQSTRIGQALHHDMDLDCHIEAY-PH-PILYWAKDGEIVVN----------DEYHSIS--- 214 (232)
Q Consensus 153 -~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~g~~~~~----------~~~~~~~--- 214 (232)
..+.+.+ .+..+|.+.+.+.......|+.+.|.|.+.|+ |. ..+.|+|||..+.. ++.|.+.
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l 188 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKL 188 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEE
T ss_pred CcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEE
Confidence 2222222 34467777665544333458899999999985 44 37999999987642 2233332
Q ss_pred -EeccccCCceEEEEecC
Q psy15206 215 -NFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 215 -~~~~~~~d~g~Y~C~~~ 231 (232)
+......|.|.|+|.|.
T Consensus 189 ~v~~~~~~~~g~YtC~v~ 206 (239)
T 1i1c_A 189 NVKKETWQQGNTFTCSVL 206 (239)
T ss_dssp EEEHHHHHTTCCEEEEEE
T ss_pred EEChhhcCCCCEEEEEEE
Confidence 12222246899999874
No 244
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.76 E-value=2.2e-18 Score=120.63 Aligned_cols=145 Identities=13% Similarity=0.182 Sum_probs=90.8
Q ss_pred ecCCcEEEEeeeccCCC----CeEEEEeCCeeeCCCC---cEEeeCCeEEE------CCCCCCCCeEEEEEeEeCCCCc-
Q psy15206 87 KEGQSVQLECHAEGHPI----PTISWRRENNAILPNG---QTIFTGSTLQI------PRITKEDRGAYYCVAQNGIGRG- 152 (232)
Q Consensus 87 ~~g~~~~l~C~~~~~~~----~~~~W~~~~~~~~~~~---~~~~~~~~l~i------~~~~~~~~g~y~C~~~~~~~~~- 152 (232)
..|+.+.|.|.+.|.++ ..+.|++++..+.... .....++.+.+ ......|.|.|+|.+.+..+..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 68999999999988652 4899999997764321 11122233333 2333345999999999976642
Q ss_pred eeeEEEE--EEEeccEEEeccceeeeeccCeEEEEEEeecC-CC-CeEEEeeCCEEecC----------CCeEEEE----
Q psy15206 153 ARRKIEV--KVEFAPIVTVQSTRIGQALHHDMDLDCHIEAY-PH-PILYWAKDGEIVVN----------DEYHSIS---- 214 (232)
Q Consensus 153 ~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~g~~~~~----------~~~~~~~---- 214 (232)
..+.+.+ .+..+|.+...+.......|..+.|.|.+.|+ |. +.+.|+|||..+.. ++.+.+.
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~ 175 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLT 175 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEE
T ss_pred eEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEE
Confidence 2222222 34457777655443333356679999999985 44 38999999987642 2223322
Q ss_pred EeccccCCceEEEEecC
Q psy15206 215 NFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 215 ~~~~~~~d~g~Y~C~~~ 231 (232)
+......|.|.|+|.|.
T Consensus 176 i~~~~~~~~g~YtC~a~ 192 (207)
T 1l6x_A 176 VDKSRWQQGNVFSCSVM 192 (207)
T ss_dssp EEHHHHHTTCCEEEEEE
T ss_pred ECHHHcCCCCEEEEEEE
Confidence 22223357899999974
No 245
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.76 E-value=3e-18 Score=119.31 Aligned_cols=129 Identities=17% Similarity=0.169 Sum_probs=89.9
Q ss_pred ceEeecCCeEEEEEE---ecCCCCCeEEEEeCcE--------------------------------------------ee
Q psy15206 22 LSVAKEGQSVQLECH---AEGHPIPTISWRRNFK--------------------------------------------RL 54 (232)
Q Consensus 22 ~~~~~~G~~v~l~C~---~~~~p~~~~~W~~~~~--------------------------------------------~~ 54 (232)
++.+..|++++|+|. +.+.|.+.++|+|++. +.
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 578999999999995 5577899999999431 11
Q ss_pred eeEEEEeeee------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC----CCcE-Ee
Q psy15206 55 GRLHLAIPYT------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP----NGQT-IF 123 (232)
Q Consensus 55 ~~~~~~~~~~------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~----~~~~-~~ 123 (232)
|.|.|..... ...|.|..||.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..+. ..
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~-~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~ 160 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSV-HSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKE 160 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEE-EEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEEC
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeee-cceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEe
Confidence 4566654221 56677766555443 44555677899999999999999999999987654422 1122 22
Q ss_pred eCCeE---EECCCCCCCCeEEEEEeEeCCCC
Q psy15206 124 TGSTL---QIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 124 ~~~~l---~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.+++| .+.++..+|.|.|+|.+.|..|.
T Consensus 161 ~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~ 191 (203)
T 4fa8_A 161 KDGSLSVAVDLSLPKPWHLPVTCVGKNDKEE 191 (203)
T ss_dssp TTSCEEEEEEEEECSSCCCCEEEEEESSSCE
T ss_pred CCCCEEEEEECCCCHHHCEEEEEEEEcCCCE
Confidence 34444 44689999999999999999886
No 246
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.76 E-value=5.4e-18 Score=125.68 Aligned_cols=149 Identities=22% Similarity=0.308 Sum_probs=104.7
Q ss_pred ceEeecCCcEEEEeeeccC-CCCeEEEEeCCeeeCC-----------------CCcEEe-----eCCeEEECCCCCCCCe
Q psy15206 83 LSVAKEGQSVQLECHAEGH-PIPTISWRRENNAILP-----------------NGQTIF-----TGSTLQIPRITKEDRG 139 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~~~~~~~-----------------~~~~~~-----~~~~l~i~~~~~~~~g 139 (232)
..++.+|+++.|.|.+.+. +.+.+.|++++..... ..+... .+.+|.|.++..+|.|
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 87 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSG 87 (308)
T ss_dssp SCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCE
T ss_pred EeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCE
Confidence 4677789999999998654 4456999986532100 011111 2357999999999999
Q ss_pred EEEEEeEeCCCCceeeEEEEEEEeccEEEe--ccceeeeeccCeEEEEEEe-ecCCCCeEEEeeCCEEecCC------Ce
Q psy15206 140 AYYCVAQNGIGRGARRKIEVKVEFAPIVTV--QSTRIGQALHHDMDLDCHI-EAYPHPILYWAKDGEIVVND------EY 210 (232)
Q Consensus 140 ~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~--~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~g~~~~~~------~~ 210 (232)
.|+|.+.+...........+.+...|.+.. .+.......|+.+.|.|.+ .|.|.+.+.|++++..+... ..
T Consensus 88 ~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~ 167 (308)
T 4fom_A 88 KYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNET 167 (308)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSC
T ss_pred EEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeec
Confidence 999999886443355666677766665433 3444455568899999985 68999999999998665321 11
Q ss_pred ----EEEEEeccccCCceEEEEecC
Q psy15206 211 ----HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 211 ----~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
-.+.+......|+|.|+|.|.
T Consensus 168 ~~~~s~l~i~~~~~~d~g~Y~C~a~ 192 (308)
T 4fom_A 168 ATIISQYKLFPTRFARGRRITCVVK 192 (308)
T ss_dssp EEEEEEEEECCCGGGTTCEEEEEEE
T ss_pred ccccccceEEeeeecCCccEEEEEE
Confidence 246667778899999999874
No 247
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.76 E-value=2e-17 Score=113.58 Aligned_cols=136 Identities=14% Similarity=0.201 Sum_probs=98.8
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcE-----------------eeeeEEEEeeee-------
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK-----------------RLGRLHLAIPYT------- 64 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~-----------------~~~~~~~~~~~~------- 64 (232)
+..+|.|... +.. .+.+|++++|.|.+.+ +.+.+.|+|++. +.|.|+|.....
T Consensus 5 ~~~~P~i~~~-p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s 81 (184)
T 2gi7_A 5 PLPKPSLQAL-PSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSRYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPS 81 (184)
T ss_dssp CBCCCEEEEE-SCS-EEETTCCEEEEEECST-TCSEEEEEETTTCCEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCC
T ss_pred CCCCCeEEeC-CCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccccCcccEEEECcCChhhCceEEEEEEcCCCccCCC
Confidence 4578999887 544 8999999999999988 778999999643 225888876331
Q ss_pred -cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeE
Q psy15206 65 -SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGA 140 (232)
Q Consensus 65 -~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 140 (232)
.+.|.|.. +|.+.. .+ ...+.+|+.+.|.|.+.+. ++.+.|++++..+............|.|.++..+|.|.
T Consensus 82 ~~~~l~V~~~~~~p~i~~-~p-~~~v~~G~~v~l~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 158 (184)
T 2gi7_A 82 DQLELVATGVFAKPSLSA-QP-GPAVSSGGDVTLQCQTRYG-FDQFALYKEGDPAPYKNPERWYRASFPIITVTAAHSGT 158 (184)
T ss_dssp CCEEEEEESSSCCCEEEE-EC-CCSSCCTTCEEEEEECSSC-CCEEEEEECCCCTTSCCCCEEEEESSSEEEETTCCSEE
T ss_pred CCEEEEecCcCCCCEEEe-CC-CceecCCCcEEEEEEcCCC-CcEEEEEECCCcCcceecCCCceEEEEEccCCccCCeE
Confidence 24455532 333332 22 3456689999999998764 46899999998765433333345578899999999999
Q ss_pred EEEEeEeCCC
Q psy15206 141 YYCVAQNGIG 150 (232)
Q Consensus 141 y~C~~~~~~~ 150 (232)
|+|.+.|..+
T Consensus 159 Y~C~a~n~~~ 168 (184)
T 2gi7_A 159 YRCYSFSSRD 168 (184)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEEeCCC
Confidence 9999998643
No 248
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.75 E-value=4.2e-17 Score=118.73 Aligned_cols=150 Identities=21% Similarity=0.317 Sum_probs=99.3
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eeeC-----CCC-----------cEEee-----CCeEEECCCCCCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAIL-----PNG-----------QTIFT-----GSTLQIPRITKED 137 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~~-----~~~-----------~~~~~-----~~~l~i~~~~~~~ 137 (232)
+....+.+|+++.|.|.+.+ +.+.+.|++.. .... ... ++... ..+|.|.+++.+|
T Consensus 34 p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 112 (270)
T 3qib_D 34 PRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGD 112 (270)
T ss_dssp CSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGG
T ss_pred CCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhH
Confidence 44567889999999999865 66789999832 1100 000 22211 3479999999999
Q ss_pred CeEEEEEeEeCCC---CceeeEEEEEEEe------ccEEEec-cceeeeeccCeEEEEEEeec-CCCC-eEEEeeCCEEe
Q psy15206 138 RGAYYCVAQNGIG---RGARRKIEVKVEF------APIVTVQ-STRIGQALHHDMDLDCHIEA-YPHP-ILYWAKDGEIV 205 (232)
Q Consensus 138 ~g~y~C~~~~~~~---~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~g~~~ 205 (232)
.|.|.|.+.+... ........+.|.. +|.+... +....+..|+.++|.|.+.| .|.+ .+.|+|+|..+
T Consensus 113 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l 192 (270)
T 3qib_D 113 SALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 192 (270)
T ss_dssp CEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred CeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEEC
Confidence 9999999986321 1122334566654 5665543 33334556999999999988 6656 79999999887
Q ss_pred cC----------------CCeEEE----EEeccccCC-ceEEEEecC
Q psy15206 206 VN----------------DEYHSI----SNFGTSEGT-TGSLQCKVP 231 (232)
Q Consensus 206 ~~----------------~~~~~~----~~~~~~~~d-~g~Y~C~~~ 231 (232)
.. ++.+.+ .+......| .|.|+|.|.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~ 239 (270)
T 3qib_D 193 HSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQ 239 (270)
T ss_dssp CTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEE
T ss_pred CCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEE
Confidence 53 233433 333444455 899999874
No 249
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.75 E-value=3.3e-17 Score=115.15 Aligned_cols=146 Identities=18% Similarity=0.181 Sum_probs=99.7
Q ss_pred CcceEeecC--CeEEEEEEecCCCCCeEEEEeC---cEe------------------------eeeEEEEeeee-----c
Q psy15206 20 TQLSVAKEG--QSVQLECHAEGHPIPTISWRRN---FKR------------------------LGRLHLAIPYT-----S 65 (232)
Q Consensus 20 ~~~~~~~~G--~~v~l~C~~~~~p~~~~~W~~~---~~~------------------------~~~~~~~~~~~-----~ 65 (232)
+..+.+.+| ++++|.|.+.+ |.+.+.|++. +.. .|.|.|..... .
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s 92 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQS 92 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEEC
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEE
Confidence 578889999 99999999987 7789999873 321 14677765221 2
Q ss_pred --CceeecC--CcEEecCCCCceEeecCCcEEEEeeeccCCC--CeEEEEeCCeeeCCCCc-E-----------EeeCCe
Q psy15206 66 --PEAQVDT--PPVILNNSPQLSVAKEGQSVQLECHAEGHPI--PTISWRRENNAILPNGQ-T-----------IFTGST 127 (232)
Q Consensus 66 --~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~~~~~~~~~~~-~-----------~~~~~~ 127 (232)
+.|.|.. +|.+.........+.+|+.+.|.|.+.+.+. +.+.|++++..+..... . ....+.
T Consensus 93 ~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (213)
T 2x1w_L 93 IMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLST 172 (213)
T ss_dssp CCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEE
T ss_pred EEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEE
Confidence 3455532 2333332344447889999999999987553 47999998875322111 0 112346
Q ss_pred EEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEE
Q psy15206 128 LQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIV 167 (232)
Q Consensus 128 l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 167 (232)
|.|.++..+|+|.|+|.+.|..|. ....+.|.|..+|.+
T Consensus 173 L~I~~v~~~D~G~Y~C~a~N~~g~-~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 173 LTIDGVTRSDQGLYTCAASSGLMT-KKNSTFVRVHEDPIE 211 (213)
T ss_dssp EEESSCCGGGCEEEEEEEECSSCE-EEEEEEEEEEC----
T ss_pred EEECCCCcccCEEEEEEEecCCCc-EEEEEEEEEeccccc
Confidence 999999999999999999998877 567888888877765
No 250
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.75 E-value=2.5e-17 Score=114.21 Aligned_cols=134 Identities=16% Similarity=0.179 Sum_probs=86.7
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee--------------------------eeEEEEeee
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL--------------------------GRLHLAIPY 63 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~--------------------------~~~~~~~~~ 63 (232)
..+|.|... |. ..+.+|++++|.|.+.+.+. .+.|+|++..+ |.|+|....
T Consensus 3 ~~~P~i~~~-p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 2d3v_A 3 LSKATLWAE-PG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYS 79 (196)
T ss_dssp CCBCEEEEE-SC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeC-CC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeC
Confidence 458999887 54 47999999999999998665 99999954211 467776621
Q ss_pred e--------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcE--Ee----eCC
Q psy15206 64 T--------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQT--IF----TGS 126 (232)
Q Consensus 64 ~--------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~--~~----~~~ 126 (232)
. .+.|.|.. +|.+.. .+ ...+.+|+.+.|.|.+.+.+ +.+.|++++..+...... .. ...
T Consensus 80 ~~g~~~~s~~~~l~V~~~~~~p~i~~-~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~ 156 (196)
T 2d3v_A 80 PAGWSEPSDPLELVVTGFYNKPTLSA-LP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQA 156 (196)
T ss_dssp TTEECBCCCCEEEEEECSSCCCEEEC-------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEE
T ss_pred CCCcCCcCccEEEEecCCCCCCeEEc-cC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCcee
Confidence 1 24556554 344332 22 24677899999999999887 889999998765321111 11 125
Q ss_pred eEEECCCCCCCCeEEEEEeEeCC
Q psy15206 127 TLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 127 ~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
.|.|.+++.+|.|.|+|.+.+..
T Consensus 157 ~L~I~~v~~~D~G~Y~C~a~n~~ 179 (196)
T 2d3v_A 157 LFPVGPVTPSHRWMLRCYGSRRH 179 (196)
T ss_dssp EEECCCCBTTBCEEEEEEEEETT
T ss_pred EEEeeecCcccCeeEEEEEEccC
Confidence 79999999999999999999864
No 251
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.75 E-value=7.6e-18 Score=117.77 Aligned_cols=148 Identities=20% Similarity=0.362 Sum_probs=107.9
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe-----------------------------------eee
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR-----------------------------------LGR 56 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~-----------------------------------~~~ 56 (232)
++.|... +.++.+.+|++++|.|.+.+.|.+.+.|++++.. .|.
T Consensus 4 ~~~i~~~-~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 4 SVTVHSS-EPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGT 82 (209)
T ss_dssp CCEEECS-CSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSE
T ss_pred eEEEEcC-CCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcE
Confidence 4566655 7888899999999999999989999999995422 146
Q ss_pred EEEEeeee--------cCceeecCCcEEecCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCeeeCCCCc-------
Q psy15206 57 LHLAIPYT--------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENNAILPNGQ------- 120 (232)
Q Consensus 57 ~~~~~~~~--------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~~~------- 120 (232)
|.|..... .+.|.|..+|.... ......+..|+.+.|.|.+ .+.|.+.+.|++++..+.....
T Consensus 83 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 161 (209)
T 1nbq_A 83 YTCMVSEEGGNSYGEVKVKLIVLVPPSKPT-VNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSN 161 (209)
T ss_dssp EEEEEEETTSSCEECCEEECCEEBCCCCCC-CCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTT
T ss_pred EEEEEecCCCCccceEEEEEEEecCCcCCC-cccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeec
Confidence 77766431 44556666665443 2333457789999999996 8889999999999887654321
Q ss_pred --EE--eeCCeEEECCCCCCCCeEEEEEeEeCCCCc-eeeEEEEEE
Q psy15206 121 --TI--FTGSTLQIPRITKEDRGAYYCVAQNGIGRG-ARRKIEVKV 161 (232)
Q Consensus 121 --~~--~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v 161 (232)
+. ...+.|.|.++..+|.|.|+|.+.|..|.. .+..+.+.|
T Consensus 162 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 162 SSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp CCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred cceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 11 134689999999999999999999988774 233344433
No 252
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.75 E-value=4.6e-17 Score=115.23 Aligned_cols=150 Identities=19% Similarity=0.319 Sum_probs=99.6
Q ss_pred CceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eee--C---------------CCCcEEee------CCeEEECCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAI--L---------------PNGQTIFT------GSTLQIPRIT 134 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~--~---------------~~~~~~~~------~~~l~i~~~~ 134 (232)
....+.+|+.+.|.|.+.+.+ .+.+.|++.. ..+ . ...++... ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 345677999999999998755 4679999853 111 0 11233322 2379999999
Q ss_pred CCCCeEEEEEeEeCCC---C--ceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEee-CC
Q psy15206 135 KEDRGAYYCVAQNGIG---R--GARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWAK-DG 202 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~---~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~-~g 202 (232)
.+|.|.|.|.+.+..+ . .......|.|. .+|.+...+....+..|+.+.|.|.+.+. |.+ .+.|++ +|
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g 167 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNN 167 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTS
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCC
Confidence 9999999999987642 1 11133466665 35565543222235689999999999887 776 899999 88
Q ss_pred EEecC---------CCeEE----EEEecccc--CCceEEEEecC
Q psy15206 203 EIVVN---------DEYHS----ISNFGTSE--GTTGSLQCKVP 231 (232)
Q Consensus 203 ~~~~~---------~~~~~----~~~~~~~~--~d~g~Y~C~~~ 231 (232)
..+.. +..|. +.+..... .|.|.|+|.|.
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~ 211 (223)
T 1dee_B 168 SDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQ 211 (223)
T ss_dssp CBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEE
T ss_pred CccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEE
Confidence 76532 23332 33444443 67899999974
No 253
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.74 E-value=5e-17 Score=112.70 Aligned_cols=135 Identities=19% Similarity=0.260 Sum_probs=95.9
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe--------------------------eeeEEEEeee
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR--------------------------LGRLHLAIPY 63 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~--------------------------~~~~~~~~~~ 63 (232)
..+|.|... |.. .+.+|++++|.|.+.+ +.+.+.|+|++.. .|.|+|....
T Consensus 3 ~~~P~i~~~-p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 3p2t_A 3 LPKPTLWAE-PGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRS 79 (196)
T ss_dssp BCCCEEEEE-SCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEcc-CCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeC
Confidence 357888887 555 8999999999999998 7789999995432 1467776422
Q ss_pred e--------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcE-----EeeCCe
Q psy15206 64 T--------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQT-----IFTGST 127 (232)
Q Consensus 64 ~--------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~-----~~~~~~ 127 (232)
. .+.|.|.. +|.+.. .+. ..+.+|+.+.|.|.+.+ +++.+.|++++..+...... ....+.
T Consensus 80 ~~g~~~~s~~~~l~V~~~~~~p~~~~-~~~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~ 156 (196)
T 3p2t_A 80 PVGWSQPSDPLELVMTGAYSKPTLSA-LPS-PLVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAE 156 (196)
T ss_dssp TTEEBCCCCCEEEEEECSSCCCEEEE-ESC-SEECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEE
T ss_pred CCcccCCCccEEEEecCCCCCCEEEe-CCc-ceecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcceE
Confidence 1 33445532 233332 222 25678999999999977 44579999998765432211 223567
Q ss_pred EEECCCCCCCCeEEEEEeEeCCC
Q psy15206 128 LQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 128 l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
|.|.++..+|.|.|+|.+.|..+
T Consensus 157 L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 157 FPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEECSCCGGGCEEEEEEEECGGG
T ss_pred EEeCCCcccCCCeEEEEEEcCCC
Confidence 99999999999999999998754
No 254
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.74 E-value=4.6e-17 Score=119.11 Aligned_cols=152 Identities=22% Similarity=0.338 Sum_probs=100.5
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCe--ee-------------C----CCCcEEee-----CCeEEECCCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENN--AI-------------L----PNGQTIFT-----GSTLQIPRITK 135 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~~-------------~----~~~~~~~~-----~~~l~i~~~~~ 135 (232)
.+....+.+|+++.|.|.+.+.+.+.+.|++... .. . ...++... ..+|.|.+++.
T Consensus 30 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 109 (279)
T 2wbj_D 30 HPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHP 109 (279)
T ss_dssp ECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCG
T ss_pred CCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCc
Confidence 3556778899999999999887778899998641 10 0 01233222 23799999999
Q ss_pred CCCeEEEEEeEeCCC----C-ceeeEEEEEEEe------ccEEEec-cceeeeeccCeEEEEEEeecC-CC-CeEEEeeC
Q psy15206 136 EDRGAYYCVAQNGIG----R-GARRKIEVKVEF------APIVTVQ-STRIGQALHHDMDLDCHIEAY-PH-PILYWAKD 201 (232)
Q Consensus 136 ~~~g~y~C~~~~~~~----~-~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~ 201 (232)
+|.|.|.|.+.+..+ . .......+.|.. +|.+... +....+..|+.+.|.|.+.|. |. +.+.|++|
T Consensus 110 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~ 189 (279)
T 2wbj_D 110 EDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 189 (279)
T ss_dssp GGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEET
T ss_pred cCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEEC
Confidence 999999999998421 0 012234566653 5666543 333334578999999999987 43 58999999
Q ss_pred CEEecC----------------CCeEE----EEEeccccC-CceEEEEecC
Q psy15206 202 GEIVVN----------------DEYHS----ISNFGTSEG-TTGSLQCKVP 231 (232)
Q Consensus 202 g~~~~~----------------~~~~~----~~~~~~~~~-d~g~Y~C~~~ 231 (232)
|..+.. +..|. +.+...... |.|.|+|.|.
T Consensus 190 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~ 240 (279)
T 2wbj_D 190 GKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQ 240 (279)
T ss_dssp TEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEE
T ss_pred CEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEE
Confidence 987643 12232 333333333 4678999974
No 255
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.74 E-value=1.1e-16 Score=109.82 Aligned_cols=133 Identities=18% Similarity=0.283 Sum_probs=98.4
Q ss_pred cceEeecCCeEEEEEEecCCCCCeEEEEeCcEe--------------------------------------------eee
Q psy15206 21 QLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR--------------------------------------------LGR 56 (232)
Q Consensus 21 ~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~--------------------------------------------~~~ 56 (232)
..+.+.+|++++|.|.+.+.|.+.+.|++++.. .|.
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 456789999999999999888999999996421 024
Q ss_pred EEEEeeee--cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCC
Q psy15206 57 LHLAIPYT--SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRIT 134 (232)
Q Consensus 57 ~~~~~~~~--~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~ 134 (232)
|.|..... .+.|.|.. . . .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ......|.|.++.
T Consensus 83 Y~C~~~~~~~~~~l~V~~---~-~-~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~L~i~~v~ 151 (184)
T 2ny1_B 83 YICEVEDQKEEVQLLVFG---L-T-ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------IQGGKTLSVSQLE 151 (184)
T ss_dssp EEEEETTEEEEEEEEEEE---E-E-ESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE------EEESSEEEESSCC
T ss_pred EEEEEEcCCCcEEEEEEE---e-c-CCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc------ccCceEEEEecCC
Confidence 45544221 34444442 1 1 133346779999999999988899999999987554 3456789999999
Q ss_pred CCCCeEEEEEeEeCCCCceeeEEEEEEEecc
Q psy15206 135 KEDRGAYYCVAQNGIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 165 (232)
.+|.|.|+|.+.+..+. ....+.+.|...|
T Consensus 152 ~~d~G~Y~C~a~n~~~~-~~~~~~l~V~~~p 181 (184)
T 2ny1_B 152 LQDSGTWTCTVLQNQKK-VEFKIDIVVLAFQ 181 (184)
T ss_dssp GGGCEEEEEEEEETTEE-EEEEEEEEEECCC
T ss_pred cCCCeEEEEEEEECCce-EEEEEEEEEEecC
Confidence 99999999999986655 5566777776554
No 256
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.74 E-value=9.5e-18 Score=117.66 Aligned_cols=143 Identities=18% Similarity=0.271 Sum_probs=99.3
Q ss_pred CcceEeecCCeEEEEEEecCCC----CCeEEEEeCc----------------E---------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP----IPTISWRRNF----------------K--------------------------- 52 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p----~~~~~W~~~~----------------~--------------------------- 52 (232)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.. .
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 86 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86 (214)
T ss_dssp EEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE
T ss_pred CceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE
Confidence 5678899999999999999866 4699999821 0
Q ss_pred --------eeeeEEEEeee------ecCceeecCCcEEecCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCee--e
Q psy15206 53 --------RLGRLHLAIPY------TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENNA--I 115 (232)
Q Consensus 53 --------~~~~~~~~~~~------~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~--~ 115 (232)
+.|.|.|.... ..+.|.|..+|.... ......+..|+.+.|.|.+ .+.|.+.+.|++++.. +
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~-~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~ 165 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTR-CFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTM 165 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCE-EEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCC
T ss_pred EEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCce-eeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCcc
Confidence 11356665522 155666666554322 1112235679999999999 7889999999996432 2
Q ss_pred CCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEec
Q psy15206 116 LPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFA 164 (232)
Q Consensus 116 ~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~ 164 (232)
..........+.|.|.++..+|.|.|+|.+.|..|. ....+.|.|..+
T Consensus 166 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~~P 213 (214)
T 3jz7_A 166 PTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGS-DQCMLRLDVVPP 213 (214)
T ss_dssp CGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEECCBCC
T ss_pred CccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCc-EEEEEEEEEeCC
Confidence 211122223568999999999999999999998877 456666666533
No 257
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.74 E-value=7.5e-18 Score=123.85 Aligned_cols=149 Identities=19% Similarity=0.218 Sum_probs=107.5
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe--eCCeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF--TGSTLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
+|.+.. .+....+.+|+.+.|.|.+.+. +.|++++... ..... ..+.|.|.++...|.|.|+|.+.+..+
T Consensus 4 ~P~i~~-~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~---~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 75 (292)
T 4dkd_C 4 IPVIEP-SVPELVVKPGATVTLRCVGNGS----VEWDGPPSPH---WTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPL 75 (292)
T ss_dssp CCEEES-CCSSCEECTTCCEEEEEECSSC----CCBCCCCCSS---CEECCBTTEEEEEESSCCGGGCSCEEECCCC---
T ss_pred CceecC-CCCeEEEcCCCcEEEEEcCCCc----eEEccCCCCc---eEEeccCceEEEEEcccccccCEEEEEEEccCCC
Confidence 455543 5566788899999999999773 8999765321 11111 124899999999999999999998766
Q ss_pred CceeeEEEEEEEeccE-EEeccceeeeeccCeEEEEEEeecCCC--CeEEEeeC-CEEecCCCeE------EEEEecccc
Q psy15206 151 RGARRKIEVKVEFAPI-VTVQSTRIGQALHHDMDLDCHIEAYPH--PILYWAKD-GEIVVNDEYH------SISNFGTSE 220 (232)
Q Consensus 151 ~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~-g~~~~~~~~~------~~~~~~~~~ 220 (232)
. ....+.+.|..+|. +...+....+..|+.+.|.|.+.+ |. +.+.|+++ +..+....++ .+.+.++..
T Consensus 76 ~-~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 153 (292)
T 4dkd_C 76 G-GSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKF 153 (292)
T ss_dssp --CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCG
T ss_pred C-cceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCCCH
Confidence 5 36677788877765 355566778889999999999987 54 67999997 4444333322 266777888
Q ss_pred CCceEEEEecC
Q psy15206 221 GTTGSLQCKVP 231 (232)
Q Consensus 221 ~d~g~Y~C~~~ 231 (232)
.|+|.|+|.+.
T Consensus 154 ~d~G~Y~C~a~ 164 (292)
T 4dkd_C 154 IQSQDYQCSAL 164 (292)
T ss_dssp GGCSEEEEEEC
T ss_pred HHCeEEEEEEE
Confidence 99999999975
No 258
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.74 E-value=2.7e-17 Score=115.72 Aligned_cols=149 Identities=20% Similarity=0.358 Sum_probs=93.8
Q ss_pred CceEeecCCcEEEEeeeccC--CCCeEEEEeCC--eee--C--------------CCCcEEee----CCeEEECCCCCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGH--PIPTISWRREN--NAI--L--------------PNGQTIFT----GSTLQIPRITKED 137 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~~--~--------------~~~~~~~~----~~~l~i~~~~~~~ 137 (232)
....+.+|+++.|.|.+.+. +.+.+.|++.. ... . ...++... ..+|.|.+++.+|
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (215)
T 3nl4_H 7 GGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTED 86 (215)
T ss_dssp CCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGG
T ss_pred CCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCccc
Confidence 44577789999999999763 35679999742 110 0 01122211 1259999999999
Q ss_pred CeEEEEEeEeCCCC---ceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecCCCC--eEEEeeCCEEe---
Q psy15206 138 RGAYYCVAQNGIGR---GARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHP--ILYWAKDGEIV--- 205 (232)
Q Consensus 138 ~g~y~C~~~~~~~~---~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~g~~~--- 205 (232)
+|.|.|.+.+..+. .......+.|. .+|.+...+....+..|+.++|.|.+.+.+++ .+.|+++|..+
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~ 166 (215)
T 3nl4_H 87 TATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVR 166 (215)
T ss_dssp CEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred CEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeE
Confidence 99999999886431 12233456665 46666644444456679999999999886543 57899998632
Q ss_pred ------cCCCeEEEEE-eccccCCceEEEEecC
Q psy15206 206 ------VNDEYHSISN-FGTSEGTTGSLQCKVP 231 (232)
Q Consensus 206 ------~~~~~~~~~~-~~~~~~d~g~Y~C~~~ 231 (232)
..++.+.+.. ......| |.|+|.|.
T Consensus 167 ~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~ 198 (215)
T 3nl4_H 167 TFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVA 198 (215)
T ss_dssp ECCCEECTTSCEEEEEEEEECC----CCEEEEE
T ss_pred ecCceECCCCCEEEEEEEEEeccC-CEEEEEEE
Confidence 2344555422 3455567 99999974
No 259
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.73 E-value=1.1e-16 Score=110.25 Aligned_cols=145 Identities=12% Similarity=0.165 Sum_probs=98.1
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee--------------------------eeEEEEeeee
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL--------------------------GRLHLAIPYT 64 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~--------------------------~~~~~~~~~~ 64 (232)
.+|.|... |.. .+.+|++|+|.|.+.+ +...+.|+|++... |.|+|.....
T Consensus 3 ~~P~i~~~-p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 3 PKPFIWAE-PHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCCEEEEE-SCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEee-cCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 47899887 555 8999999999999976 45789999965321 4677765221
Q ss_pred --------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCC
Q psy15206 65 --------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRI 133 (232)
Q Consensus 65 --------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~ 133 (232)
.+.|.|.. +|.+.. .+ ...+.+|+.+.|.|.+.+ +.+.+.|++++..+............|.|.++
T Consensus 80 ~~~~~~s~~~~l~V~~~~~~p~i~~-~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v 156 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTEMYDTPTLSV-HP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPV 156 (188)
T ss_dssp TEECCCCCCEEEEEESCSCCCEEEE-ES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEEEEECSSEEEEEEEEC
T ss_pred CCCCCCCCceEEEecccCCCCeEEE-CC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccccccccCCCceeEEEECCC
Confidence 23455542 344332 22 345779999999999865 45689999998665321111123457999999
Q ss_pred CCCCCeEEEEEeEeCCC--CceeeEEEEEE
Q psy15206 134 TKEDRGAYYCVAQNGIG--RGARRKIEVKV 161 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~--~~~~~~~~l~v 161 (232)
+.+|.|.|+|.+.+... ...+..+.|.|
T Consensus 157 ~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V 186 (188)
T 1oll_A 157 TTAHRGTYRCFGSYNNHAWSFPSEPVKLLV 186 (188)
T ss_dssp CGGGCEEEEEECEEETTEECCCCCCEEEEE
T ss_pred CcCCCcEEEEEEEcCCCcCCCCCCcEEEEe
Confidence 99999999999987531 22344455554
No 260
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.73 E-value=1.8e-17 Score=117.65 Aligned_cols=149 Identities=21% Similarity=0.387 Sum_probs=96.6
Q ss_pred CceEeecCCcEEEEeeeccCCC----CeEEEEeCC--eee----C------------CCCcEEee------CCeEEECCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGHPI----PTISWRREN--NAI----L------------PNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~~----~~~~W~~~~--~~~----~------------~~~~~~~~------~~~l~i~~~ 133 (232)
....+.+|+.+.|.|.+.+.+. +.+.|++.. ..+ . ...++... ..+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (228)
T 3bae_H 8 GPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSV 87 (228)
T ss_dssp CCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSC
T ss_pred CceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCC
Confidence 3456778999999999988664 789999852 211 0 01233221 247999999
Q ss_pred CCCCCeEEEEEeEeCCC------C--ceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEe
Q psy15206 134 TKEDRGAYYCVAQNGIG------R--GARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWA 199 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~------~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~ 199 (232)
+.+|.|.|.|.+.+..+ . .......|.|. .+|.+...+....+..|+.+.|.|.+.|. |.+ .+.|+
T Consensus 88 ~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~ 167 (228)
T 3bae_H 88 DTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWN 167 (228)
T ss_dssp CGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEG
T ss_pred CcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEe
Confidence 99999999999988643 1 11123566665 35666554433345689999999999886 777 89999
Q ss_pred eCCEEec--------CCCeE----EEEEeccccCCceEEEEecC
Q psy15206 200 KDGEIVV--------NDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 200 ~~g~~~~--------~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
++|..+. ..+.+ .+.+......| |.|+|.|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~ 210 (228)
T 3bae_H 168 SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVA 210 (228)
T ss_dssp GGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEE
T ss_pred eCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEE
Confidence 9876421 11222 23444444444 99999874
No 261
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.73 E-value=1.2e-16 Score=114.78 Aligned_cols=133 Identities=19% Similarity=0.307 Sum_probs=96.2
Q ss_pred CcceEeecCCeEEEEEEecC---CCCCeEEEEeCcEee------------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEG---HPIPTISWRRNFKRL------------------------------------------ 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~---~p~~~~~W~~~~~~~------------------------------------------ 54 (232)
+.++.+.+|++++|.|.+.+ .+.+.+.|++++...
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 88 (250)
T 2fbo_J 9 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLA 88 (250)
T ss_dssp CSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTT
T ss_pred CCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCC
Confidence 56788999999999999986 788899999954211
Q ss_pred --------------eeEEEEeeee-----------cCceeecCC---cEEecCCCCceEeecCCcEEEEeeeccCCCCeE
Q psy15206 55 --------------GRLHLAIPYT-----------SPEAQVDTP---PVILNNSPQLSVAKEGQSVQLECHAEGHPIPTI 106 (232)
Q Consensus 55 --------------~~~~~~~~~~-----------~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~ 106 (232)
|.|.|..... .+.|.|..+ +......+....+.+|+.+.|.|.+.+.|.|.+
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v 168 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANV 168 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEE
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCee
Confidence 3555555221 344666553 222223344566678999999999999898999
Q ss_pred EEEeCCeeeCCC------------------------CcEEe-eCCeEEECCCCCCCCeEEEEEeEeCCCCc
Q psy15206 107 SWRRENNAILPN------------------------GQTIF-TGSTLQIPRITKEDRGAYYCVAQNGIGRG 152 (232)
Q Consensus 107 ~W~~~~~~~~~~------------------------~~~~~-~~~~l~i~~~~~~~~g~y~C~~~~~~~~~ 152 (232)
.|++++..+... ..... ....|.|.++..+|.|.|+|.+.|..|..
T Consensus 169 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 239 (250)
T 2fbo_J 169 TWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGEL 239 (250)
T ss_dssp EEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGG
T ss_pred EEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCcccc
Confidence 999998765331 11111 33689999999999999999999976653
No 262
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.73 E-value=4.9e-17 Score=118.97 Aligned_cols=150 Identities=19% Similarity=0.313 Sum_probs=100.5
Q ss_pred CCceEeecCCcEEEEeeeccC--CCCeEEEEeCCee--eC-------C----------CCcEEee--C----CeEEECCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGH--PIPTISWRRENNA--IL-------P----------NGQTIFT--G----STLQIPRI 133 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~~~--~~-------~----------~~~~~~~--~----~~l~i~~~ 133 (232)
+....+.+|+++.|.|.+.+. +.+.+.|++.... +. . ..++... . .+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 455678899999999999774 4567999974311 10 0 0122211 1 27999999
Q ss_pred CCCCCeEEEEEeEeC--------CCCceeeEEEEEEEe---------------ccEEEeccceeeeeccCeEEEEEEeec
Q psy15206 134 TKEDRGAYYCVAQNG--------IGRGARRKIEVKVEF---------------APIVTVQSTRIGQALHHDMDLDCHIEA 190 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~--------~~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~g~~~~l~C~~~~ 190 (232)
+.+|+|.|.|.+.+. ..........|.|.. ++.+...+. ..+..|++++|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNS 165 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecC
Confidence 999999999999876 111122233455544 334444444 77889999999999988
Q ss_pred -CC-CCeEEEeeC--CEEec---------------------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 191 -YP-HPILYWAKD--GEIVV---------------------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 191 -~p-~~~~~W~~~--g~~~~---------------------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+ .+.+.|+|. +..+. ....+.|.+.++..+|+|.|.|.+.
T Consensus 166 ~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 231 (280)
T 3fku_X 166 NNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTW 231 (280)
T ss_dssp CCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEe
Confidence 43 368999873 21111 1234568888999999999999873
No 263
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.73 E-value=5.1e-17 Score=114.53 Aligned_cols=150 Identities=18% Similarity=0.181 Sum_probs=102.3
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee----------------------------eeEEEE
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL----------------------------GRLHLA 60 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~----------------------------~~~~~~ 60 (232)
+..+|.|... |. ..+.+|++|+|.|.+.+ +.+.|.|+|++..+ |.|+|.
T Consensus 6 ~~~~P~i~~~-p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 82 (218)
T 1uct_A 6 DFPMPFISAK-SS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQ 82 (218)
T ss_dssp GSCCCCEEES-SC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEE
T ss_pred CCCCCEEEec-CC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEE
Confidence 4568999888 54 57999999999999987 67899999953211 345555
Q ss_pred eeee--------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEE
Q psy15206 61 IPYT--------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQ 129 (232)
Q Consensus 61 ~~~~--------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~ 129 (232)
.... .+.|.|.. +|.+.. .+ ...+.+|+.+.|.|...+.+.+.+.|+++|..+............|.
T Consensus 83 a~n~~~~~~~s~~~~l~V~~~~~~P~i~~-~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~ 160 (218)
T 1uct_A 83 YRIGHYRFRYSDTLELVVTGLYGKPFLSA-DR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFS 160 (218)
T ss_dssp EEETTTEEEECCCEEEEEECSSCCCEEEE-SS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEE
T ss_pred EEcCCCceeecCCEEEEEcCcccCCEEEe-CC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEE
Confidence 4221 23455543 343332 22 34677999999999766677788999999876543211122356899
Q ss_pred ECCCCCCCCeEEEEEeEeCCC----CceeeEEEEEEEe
Q psy15206 130 IPRITKEDRGAYYCVAQNGIG----RGARRKIEVKVEF 163 (232)
Q Consensus 130 i~~~~~~~~g~y~C~~~~~~~----~~~~~~~~l~v~~ 163 (232)
|.+++.+|+|.|+|.+.+... +..+..+.|.|..
T Consensus 161 I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 161 LGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp CCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred EccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 999999999999999997532 2234556666654
No 264
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.73 E-value=5.5e-17 Score=114.18 Aligned_cols=149 Identities=19% Similarity=0.386 Sum_probs=97.6
Q ss_pred CceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eee----C------------CCCcEEee------CCeEEECCCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAI----L------------PNGQTIFT------GSTLQIPRITK 135 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~----~------------~~~~~~~~------~~~l~i~~~~~ 135 (232)
....+.+|+++.|.|.+.+.+ .+.+.|++.. ..+ . ...++... ..+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (215)
T 1c5d_H 8 GPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQT 87 (215)
T ss_dssp CCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCG
T ss_pred CCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCc
Confidence 345677899999999998754 4679999863 211 0 01233221 13799999999
Q ss_pred CCCeEEEEEeEeCCCC--ceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEEec-
Q psy15206 136 EDRGAYYCVAQNGIGR--GARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEIVV- 206 (232)
Q Consensus 136 ~~~g~y~C~~~~~~~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~~~- 206 (232)
+|+|.|.|.+.+..+. .......|.|. .+|.+...+....+..|+.+.|.|.+.|. |.+ .+.|+++|..+.
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~ 167 (215)
T 1c5d_H 88 EDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDV 167 (215)
T ss_dssp GGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSC
T ss_pred ccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCce
Confidence 9999999999876321 12233566665 24566544333345679999999999887 777 899999886432
Q ss_pred -------CCCeEEEE--EeccccCCceEEEEecC
Q psy15206 207 -------NDEYHSIS--NFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 -------~~~~~~~~--~~~~~~~d~g~Y~C~~~ 231 (232)
..+.+.+. +......| |.|+|.|.
T Consensus 168 ~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~ 200 (215)
T 1c5d_H 168 HTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVA 200 (215)
T ss_dssp CBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEE
T ss_pred EecCcccCCCCEEEEEEEecccCCC-CeEEEEEE
Confidence 11344432 22222245 99999874
No 265
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.72 E-value=2.4e-16 Score=112.13 Aligned_cols=149 Identities=17% Similarity=0.308 Sum_probs=94.0
Q ss_pred ceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eee--C--------------CCCcEEee------CCeEEECCCCCC
Q psy15206 83 LSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAI--L--------------PNGQTIFT------GSTLQIPRITKE 136 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~--~--------------~~~~~~~~------~~~l~i~~~~~~ 136 (232)
...+.+|+++.|.|.+.+.+ .+.+.|++.. ..+ . ...++... ..+|.|.+++.+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (232)
T 1dn0_B 9 AGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAA 88 (232)
T ss_dssp CCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred CEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcc
Confidence 35677899999999997754 5679999853 211 0 12233322 127999999999
Q ss_pred CCeEEEEEeEeCC--CC---ceeeEEEEEEEe----ccEEEeccceeeeecc-CeEEEEEEeecC-CCC-eEEEee-CCE
Q psy15206 137 DRGAYYCVAQNGI--GR---GARRKIEVKVEF----APIVTVQSTRIGQALH-HDMDLDCHIEAY-PHP-ILYWAK-DGE 203 (232)
Q Consensus 137 ~~g~y~C~~~~~~--~~---~~~~~~~l~v~~----~p~~~~~~~~~~~~~g-~~~~l~C~~~~~-p~~-~~~W~~-~g~ 203 (232)
|.|.|.|.+.+.. +. .......|.|.. +|.+........+..| +.++|.|.+.++ |.+ .+.|++ ||.
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~ 168 (232)
T 1dn0_B 89 DTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNS 168 (232)
T ss_dssp GCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETTSC
T ss_pred cCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCC
Confidence 9999999998421 11 122334666654 3555433222234467 899999999886 776 899999 887
Q ss_pred EecC---------CCeEE----EEEecccc--CCceEEEEecC
Q psy15206 204 IVVN---------DEYHS----ISNFGTSE--GTTGSLQCKVP 231 (232)
Q Consensus 204 ~~~~---------~~~~~----~~~~~~~~--~d~g~Y~C~~~ 231 (232)
.+.. .+.|. +.+..... .|.|.|+|.|.
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~ 211 (232)
T 1dn0_B 169 DISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQ 211 (232)
T ss_dssp EECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEE
T ss_pred ceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEE
Confidence 6532 23333 34444444 57899999874
No 266
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.72 E-value=1.4e-16 Score=127.90 Aligned_cols=150 Identities=19% Similarity=0.339 Sum_probs=104.2
Q ss_pred CceEeecCCcEEEEeee-ccCCCCeEEEEeCCeeeC-------------CCCcEEeeCCeEEECCCCCCCCeEEEEEeEe
Q psy15206 82 QLSVAKEGQSVQLECHA-EGHPIPTISWRRENNAIL-------------PNGQTIFTGSTLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~-------------~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
....+..|+++.|.|.+ .+.+.+.+.|++++..+. ........+++|.|.+++.+|.|.|+|.+.+
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEEC
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEc
Confidence 34567889999999998 778888999999875221 1112233456899999999999999999999
Q ss_pred CCCCceeeEEEEEEEeccEE-EeccceeeeeccCe-EEEEEEeec-CCCCeEEEeeCCEEecCCC-eE------------
Q psy15206 148 GIGRGARRKIEVKVEFAPIV-TVQSTRIGQALHHD-MDLDCHIEA-YPHPILYWAKDGEIVVNDE-YH------------ 211 (232)
Q Consensus 148 ~~~~~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~-~~l~C~~~~-~p~~~~~W~~~g~~~~~~~-~~------------ 211 (232)
..+......+.|.|..+|.. .+......+..++. +.|.|.+.+ +|.+.++|++||..+.... .+
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~ 533 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPET 533 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTT
T ss_pred CCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCC
Confidence 87774467788888764421 22222223445554 466999988 6999999999998875322 11
Q ss_pred -------EEEEeccc-cCCceEEEEecC
Q psy15206 212 -------SISNFGTS-EGTTGSLQCKVP 231 (232)
Q Consensus 212 -------~~~~~~~~-~~d~g~Y~C~~~ 231 (232)
.+.+..+. ..+.|.|+|.|+
T Consensus 534 g~y~~~s~L~i~~~~~~d~~~~y~C~~~ 561 (581)
T 3o3u_N 534 GLFTLQSELMVTPARGGDPRPTFSCSFS 561 (581)
T ss_dssp CCEEEEEEEEECCCTTSCSCCCEEEEEE
T ss_pred ceEEEEEEEEEEeccccCCCceEEEEEe
Confidence 23333344 344788999874
No 267
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.72 E-value=2.3e-16 Score=113.78 Aligned_cols=151 Identities=21% Similarity=0.348 Sum_probs=97.9
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eee------CC---------CC-cEEeeCCe---EEECCCCCCCCe
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAI------LP---------NG-QTIFTGST---LQIPRITKEDRG 139 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~------~~---------~~-~~~~~~~~---l~i~~~~~~~~g 139 (232)
+....+.+|+++.|.|...+.+.+.+.|++.. ... .. .. ++...... |.|.+++.+|+|
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~DsG 87 (253)
T 3to4_D 8 PRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGR 87 (253)
T ss_dssp CSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSCE
T ss_pred CCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhCe
Confidence 45567889999999999888788889999831 110 00 01 22221111 999999999999
Q ss_pred EEEEEeEeCCC---C--ceeeEEEEEEE------eccEEEecc-ceeeeeccCeEEEEEEeec-CCCC-eEEEeeCCEEe
Q psy15206 140 AYYCVAQNGIG---R--GARRKIEVKVE------FAPIVTVQS-TRIGQALHHDMDLDCHIEA-YPHP-ILYWAKDGEIV 205 (232)
Q Consensus 140 ~y~C~~~~~~~---~--~~~~~~~l~v~------~~p~~~~~~-~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~g~~~ 205 (232)
.|.|.+.+..+ . .......+.|. .+|.+...+ ....+..|+.++|.|.+.| .|.+ .+.|+++|..+
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l 167 (253)
T 3to4_D 88 TLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 167 (253)
T ss_dssp EEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEEC
Confidence 99999986532 1 11223355554 456655432 2223345789999999988 5666 79999999887
Q ss_pred cC----------------CCeE----EEEEeccccCC-ceEEEEecC
Q psy15206 206 VN----------------DEYH----SISNFGTSEGT-TGSLQCKVP 231 (232)
Q Consensus 206 ~~----------------~~~~----~~~~~~~~~~d-~g~Y~C~~~ 231 (232)
.. +..| .+.+......| .|.|+|.|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~ 214 (253)
T 3to4_D 168 HSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQ 214 (253)
T ss_dssp CTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEE
T ss_pred CCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEE
Confidence 53 2334 33344444455 779999874
No 268
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.72 E-value=9.3e-17 Score=115.77 Aligned_cols=182 Identities=16% Similarity=0.138 Sum_probs=100.8
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe----------------------------eeeEEEEe
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR----------------------------LGRLHLAI 61 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~----------------------------~~~~~~~~ 61 (232)
..+|.|... |. ..+.+|++|+|.|.+.+ +...|.|+|++.. .|.|+|..
T Consensus 5 ~~kP~i~~~-P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 81 (257)
T 1b6u_A 5 HRKPSLLAH-PG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYG 81 (257)
T ss_dssp CCCCEECCB-SC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEE
T ss_pred CCCCEEEEc-CC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeE
Confidence 458889877 44 67899999999999985 5679999995321 14677765
Q ss_pred eee-----------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcE-E----
Q psy15206 62 PYT-----------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQT-I---- 122 (232)
Q Consensus 62 ~~~-----------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~-~---- 122 (232)
.+. .+.|.|.. +|.+.. .+. ..+.+|+++.|.|.+.+. .+.+.|+++|..+...... .
T Consensus 82 ~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~-~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~ 158 (257)
T 1b6u_A 82 SVTHSPYQLSAPSDPLDIVITGLYEKPSLSA-QPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVNG 158 (257)
T ss_dssp ECSSCTTSCCCCCCCEEEEEECSSCCCEEEC-SSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSSS
T ss_pred eccCCCccccccCCCEEEecccCCCCcceEc-cCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccCC
Confidence 321 22455542 233332 222 356789999999998765 4689999998765322111 1
Q ss_pred eeCCeEEECCCCCCCCeEEEEEeEeCC----CCceeeEEEEEEEeccEEEec-cceeeeeccCeEEEEEEeecCCCCeEE
Q psy15206 123 FTGSTLQIPRITKEDRGAYYCVAQNGI----GRGARRKIEVKVEFAPIVTVQ-STRIGQALHHDMDLDCHIEAYPHPILY 197 (232)
Q Consensus 123 ~~~~~l~i~~~~~~~~g~y~C~~~~~~----~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~~~~ 197 (232)
.....|.|.+++ |.|.|+|.+.+.. ....+..+.+.|..+|..... +.......|..+.|.|.+ |.+.+.+.
T Consensus 159 ~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~ 235 (257)
T 1b6u_A 159 TFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSETGNPRHLHAAA-EQKLISEE 235 (257)
T ss_dssp CCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC---------------------------------
T ss_pred ceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCcccCccCCCeEEEEEEE-cchHHHHH
Confidence 124578999998 9999999998642 223456778888887765421 112234568889999887 66667788
Q ss_pred Eee
Q psy15206 198 WAK 200 (232)
Q Consensus 198 W~~ 200 (232)
|.-
T Consensus 236 ~~~ 238 (257)
T 1b6u_A 236 DLN 238 (257)
T ss_dssp ---
T ss_pred Hhh
Confidence 864
No 269
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.72 E-value=1.2e-16 Score=115.59 Aligned_cols=150 Identities=22% Similarity=0.376 Sum_probs=99.1
Q ss_pred CCceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eee------C-----------CCCcEEee------CCeEEECCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAI------L-----------PNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~------~-----------~~~~~~~~------~~~l~i~~~ 133 (232)
+....+.+|+++.|.|.+.+.+ .+.+.|+++. ..+ . ...++... ..+|.|.++
T Consensus 13 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 92 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSL 92 (261)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCC
Confidence 4556788999999999998765 5789999863 211 0 01233221 247999999
Q ss_pred CCCCCeEEEEEeEeCCCCc--eeeEEEEEEEe----ccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEEe
Q psy15206 134 TKEDRGAYYCVAQNGIGRG--ARRKIEVKVEF----APIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEIV 205 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~~~--~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~~ 205 (232)
+.+|.|.|.|.+.+..+.. ......|.|.. +|.+...+....+..|+.++|.|.+.+. |.+ .+.|++++..+
T Consensus 93 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~ 172 (261)
T 2xqy_G 93 TSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 172 (261)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCT
T ss_pred CcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcC
Confidence 9999999999999853211 11234666653 4665543333345679999999999885 766 89999988643
Q ss_pred cC--------CCeE----EEEEeccccCCceEEEEecC
Q psy15206 206 VN--------DEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 206 ~~--------~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.. .+.+ .|.+......| |.|+|.|.
T Consensus 173 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~ 209 (261)
T 2xqy_G 173 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVA 209 (261)
T ss_dssp TEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEE
T ss_pred ceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEE
Confidence 20 1222 34455555556 99999874
No 270
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.72 E-value=1e-16 Score=116.38 Aligned_cols=162 Identities=16% Similarity=0.244 Sum_probs=95.5
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEec---CCCCCeEEEEeCcE------------------------------------
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAE---GHPIPTISWRRNFK------------------------------------ 52 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~---~~p~~~~~W~~~~~------------------------------------ 52 (232)
.|.+... +.++.+.+|++++|.|.+. +.+.+.+.|+++..
T Consensus 5 ~~~v~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 83 (268)
T 3mj6_A 5 LPGLTVS-SPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHND 83 (268)
T ss_dssp --------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTB
T ss_pred ccccccC-CCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCE
Confidence 3455555 7788999999999999998 56778899999321
Q ss_pred -----------eeeeEEEEeeee--------cCceeecCCcEEecCCCCceEeecCCcEEEEeee---ccCCCCeEEEEe
Q psy15206 53 -----------RLGRLHLAIPYT--------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHA---EGHPIPTISWRR 110 (232)
Q Consensus 53 -----------~~~~~~~~~~~~--------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~---~~~~~~~~~W~~ 110 (232)
+.|.|.|..... .+.|.|. ...+....+.+|+.+.|.|.+ .+.|.+.+.|++
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~------~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~ 157 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL------PEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMF 157 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE------CCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEE
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe------ccCCCccccccCCcEEEEEEecCCCCCCccceEEEe
Confidence 113566655322 1222221 123456778899999999999 567888999999
Q ss_pred CCeeeCCC----------------------CcEE------eeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEE
Q psy15206 111 ENNAILPN----------------------GQTI------FTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVE 162 (232)
Q Consensus 111 ~~~~~~~~----------------------~~~~------~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 162 (232)
++...... .+.. .....|.|.++..+|.|.|+|.+.|..+. ....+.|.|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~ 236 (268)
T 3mj6_A 158 SSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLE-SRKTIVLHVV 236 (268)
T ss_dssp ECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred cCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCce-EEEEEEEEEE
Confidence 53221100 0111 12468999999999999999999997665 5667777774
Q ss_pred -eccEEEeccceeeeeccCe
Q psy15206 163 -FAPIVTVQSTRIGQALHHD 181 (232)
Q Consensus 163 -~~p~~~~~~~~~~~~~g~~ 181 (232)
.+|.+...+....+..|+.
T Consensus 237 ~~~p~~~~~p~~~~~~~~q~ 256 (268)
T 3mj6_A 237 QDEFQRTISPTPPTDKGQQG 256 (268)
T ss_dssp CC------------------
T ss_pred cCCCeeeeCCCCCCCCccee
Confidence 4666666666655555543
No 271
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.71 E-value=1.9e-16 Score=114.22 Aligned_cols=148 Identities=20% Similarity=0.346 Sum_probs=94.9
Q ss_pred CceEeecCCcEEEEeeeccC--CCCeEEEEeCCe--e---e---C-----------CCCcEEee------CCeEEECCCC
Q psy15206 82 QLSVAKEGQSVQLECHAEGH--PIPTISWRRENN--A---I---L-----------PNGQTIFT------GSTLQIPRIT 134 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~~--~---~---~-----------~~~~~~~~------~~~l~i~~~~ 134 (232)
....+.+|+++.|.|.+.+. +...+.|++... . + . ...++... ..+|.|.+++
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (253)
T 3liz_H 8 GGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLK 87 (253)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCC
T ss_pred CCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 34567789999999998763 345799998421 1 0 0 01122211 1249999999
Q ss_pred CCCCeEEEEEeEeCC---CCceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeec-CCCC-eEEEeeCCEE-
Q psy15206 135 KEDRGAYYCVAQNGI---GRGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEA-YPHP-ILYWAKDGEI- 204 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~---~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~g~~- 204 (232)
.+|+|.|.|.+.+.. .........+.|. .+|.+...+....+..|+.+.|.|.+.+ .|.+ .+.|+++|..
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~ 167 (253)
T 3liz_H 88 SEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 167 (253)
T ss_dssp GGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred hhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeec
Confidence 999999999998752 1112233456664 4666665444445667999999999988 6666 8999999862
Q ss_pred --------ecCCCeE----EEEEeccccCCceEEEEecC
Q psy15206 205 --------VVNDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 205 --------~~~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
... +.| .+.+......| |.|+|.|.
T Consensus 168 ~~~~~~~~~~~-g~~~~~s~L~i~~~~~~d-g~ytC~v~ 204 (253)
T 3liz_H 168 GVHTFPAVLQS-DLYTLSSSVTVPSSTWPS-ETVTCNVA 204 (253)
T ss_dssp TEEECCCEEET-TEEEEEEEEEEETTSTTT-SCCEEEEE
T ss_pred ceEeCCccccC-CeEEEEEEEEEcHHHCCC-ceEEEEEE
Confidence 222 444 34455666678 99999974
No 272
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.70 E-value=2.9e-16 Score=112.18 Aligned_cols=126 Identities=21% Similarity=0.355 Sum_probs=86.6
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eee--C-------------CCCcEEee-----CCeEEECCCCCCCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAI--L-------------PNGQTIFT-----GSTLQIPRITKEDR 138 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~--~-------------~~~~~~~~-----~~~l~i~~~~~~~~ 138 (232)
+....+.+|+.+.|.|.+. .+.+.+.|++.. ..+ . ...++... ..+|.|.+++.+|+
T Consensus 6 p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~ 84 (238)
T 1bec_A 6 PRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQT 84 (238)
T ss_dssp CSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGC
T ss_pred CCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccC
Confidence 4566788999999999984 456789999864 111 0 01222221 23799999999999
Q ss_pred eEEEEEeEeCCC----CceeeEEEEEEEe------ccEEEec-cceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEEe
Q psy15206 139 GAYYCVAQNGIG----RGARRKIEVKVEF------APIVTVQ-STRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEIV 205 (232)
Q Consensus 139 g~y~C~~~~~~~----~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~~ 205 (232)
|.|.|.+.+..+ ........|.|.. +|.+... +....+..|+.+.|.|.+.|. |.+ .+.|+|||..+
T Consensus 85 G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~ 164 (238)
T 1bec_A 85 SVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEV 164 (238)
T ss_dssp EEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEE
T ss_pred EEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEEC
Confidence 999999997631 1112234566653 5666543 333345579999999999986 655 89999999876
Q ss_pred cC
Q psy15206 206 VN 207 (232)
Q Consensus 206 ~~ 207 (232)
..
T Consensus 165 ~~ 166 (238)
T 1bec_A 165 HS 166 (238)
T ss_dssp CT
T ss_pred CC
Confidence 53
No 273
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.70 E-value=1.1e-15 Score=110.16 Aligned_cols=126 Identities=21% Similarity=0.351 Sum_probs=86.0
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eee---------------CCCCcEEee-----CCeEEECCCCCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAI---------------LPNGQTIFT-----GSTLQIPRITKED 137 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~---------------~~~~~~~~~-----~~~l~i~~~~~~~ 137 (232)
.+....+.+|+++.|.|.+. .+.+.+.|++.. ... ....++... ..+|.|.+++.+|
T Consensus 9 ~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D 87 (252)
T 1oga_E 9 SPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNP 87 (252)
T ss_dssp SCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCC
T ss_pred cCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhh
Confidence 45667888999999999985 456789999853 110 012233332 2479999999999
Q ss_pred CeEEEEEeEeCCC--CceeeEEEEEEE------eccEEEec-cceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEEec
Q psy15206 138 RGAYYCVAQNGIG--RGARRKIEVKVE------FAPIVTVQ-STRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEIVV 206 (232)
Q Consensus 138 ~g~y~C~~~~~~~--~~~~~~~~l~v~------~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~~~ 206 (232)
.|.|.|.+.+... ........+.|. .+|.+... +....+..|+.+.|.|.+.|. |.+ .+.|+|||..+.
T Consensus 88 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~ 167 (252)
T 1oga_E 88 TAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 167 (252)
T ss_dssp CEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred CEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECC
Confidence 9999999987521 101122345554 36666554 333344579999999999986 654 899999998764
No 274
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.70 E-value=5.9e-17 Score=116.88 Aligned_cols=148 Identities=23% Similarity=0.361 Sum_probs=86.6
Q ss_pred ceEeecCCcEEEEeeeccCC--CCeEEEEeCC--eeeC-----------------CCCcEEee------CCeEEECCCCC
Q psy15206 83 LSVAKEGQSVQLECHAEGHP--IPTISWRREN--NAIL-----------------PNGQTIFT------GSTLQIPRITK 135 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~~~-----------------~~~~~~~~------~~~l~i~~~~~ 135 (232)
...+.+|+++.|.|.+.+.+ .+.+.|++.. ..+. ...++... ..+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (257)
T 3bn9_D 9 GGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRA 88 (257)
T ss_dssp CEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCG
T ss_pred CEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 45677899999999998765 5679999853 1110 11233221 23799999999
Q ss_pred CCCeEEEEEeEeCCC----------C--ceeeEEEEEEEe----ccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEE
Q psy15206 136 EDRGAYYCVAQNGIG----------R--GARRKIEVKVEF----APIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILY 197 (232)
Q Consensus 136 ~~~g~y~C~~~~~~~----------~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~ 197 (232)
+|.|.|.|.+.+..+ . .......|.|.. +|.+........+..|+.++|.|.+.|+ |.+ .|.
T Consensus 89 ~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~v~ 168 (257)
T 3bn9_D 89 EDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 168 (257)
T ss_dssp GGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCCEEE
T ss_pred hhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcEEE
Confidence 999999999998653 1 111234666653 4665543332345679999999999886 777 899
Q ss_pred EeeCCEEe---------cCCCeEEE----EEeccccCCceEEEEecC
Q psy15206 198 WAKDGEIV---------VNDEYHSI----SNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 198 W~~~g~~~---------~~~~~~~~----~~~~~~~~d~g~Y~C~~~ 231 (232)
|+++|..+ ..++.|.+ .+......| |.|+|.|.
T Consensus 169 W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~ 214 (257)
T 3bn9_D 169 WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 214 (257)
T ss_dssp ETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEE
T ss_pred EeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEE
Confidence 99998642 12233432 333334346 99999874
No 275
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.70 E-value=6e-16 Score=113.59 Aligned_cols=144 Identities=13% Similarity=0.165 Sum_probs=101.3
Q ss_pred eEeecCCeEEEEEEecCCCCCeEEEEeCc------------------EeeeeEEEEeeee-------cCceeecC--CcE
Q psy15206 23 SVAKEGQSVQLECHAEGHPIPTISWRRNF------------------KRLGRLHLAIPYT-------SPEAQVDT--PPV 75 (232)
Q Consensus 23 ~~~~~G~~v~l~C~~~~~p~~~~~W~~~~------------------~~~~~~~~~~~~~-------~~~l~v~~--~p~ 75 (232)
..+.+|++++|.|.+. .|.+.++|++.. .+.|.|+|..... ...+.+.. +|.
T Consensus 105 ~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~ 183 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPYDHQRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSIN 183 (289)
T ss_dssp EEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCEETTTEEEECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCC
T ss_pred EEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceeecCCcCeeeeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCC
Confidence 6789999999999999 577889998842 1226888887422 23344443 333
Q ss_pred EecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC--cEE-------eeCCeEEECCCCCCCCeEEEEEeE
Q psy15206 76 ILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG--QTI-------FTGSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 76 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~--~~~-------~~~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++....... ... ...+.|.|.++..+|.|.|+|.+.
T Consensus 184 i~~-~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 262 (289)
T 3mjg_X 184 VSV-NAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVT 262 (289)
T ss_dssp CEE-EESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEE
T ss_pred cEE-eCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEee
Confidence 222 2333567899999999999999999999998765432111 111 123589999999999999999999
Q ss_pred eCCCCceeeEEEEEEEeccEEEe
Q psy15206 147 NGIGRGARRKIEVKVEFAPIVTV 169 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p~~~~ 169 (232)
|..|. ......+.+...|....
T Consensus 263 N~~G~-~~~~~~l~v~~~~~~~~ 284 (289)
T 3mjg_X 263 ESVND-HQDEKAINITVVESGHH 284 (289)
T ss_dssp ETTTT-EEEEEEEEEEEEC----
T ss_pred cCCCC-ceeEEEEEEEEEecCcc
Confidence 99888 66778888877666543
No 276
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.69 E-value=8e-16 Score=110.02 Aligned_cols=149 Identities=12% Similarity=0.131 Sum_probs=101.7
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee--------------------------eeEEEEee
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL--------------------------GRLHLAIP 62 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~--------------------------~~~~~~~~ 62 (232)
+..+|.|... |.. .+.+|++|+|.|.+.+ +...+.|+|++... |.|+|...
T Consensus 4 ~~~kP~i~~~-P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 80 (242)
T 1p6f_A 4 TLPKPFIWAE-PHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYR 80 (242)
T ss_dssp CCCCCEEEEE-SCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCCEEEee-CCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEe
Confidence 3568999888 555 8999999999999976 45689999965321 46777652
Q ss_pred ee--------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEEC
Q psy15206 63 YT--------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIP 131 (232)
Q Consensus 63 ~~--------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~ 131 (232)
.. .+.|.|.. +|.+.. .+ ...+.+|+++.|.|.+.+. .+.+.|+++|..+............|.|.
T Consensus 81 ~~~~~s~~S~~~~L~V~~~~~~P~i~~-~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~l~I~ 157 (242)
T 1p6f_A 81 VGELWSEPSNLLDLVVTEMYDTPTLSV-HP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQRGYGKVQAEFPLG 157 (242)
T ss_dssp ETTEECCCCCCEEEEEECCSCCCEEEE-ES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEEEEECSSEEEEEEE
T ss_pred cCCccccCCcceEEEeecccCCCceEc-cC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCccccCCCceEEEEeC
Confidence 11 23444542 333332 22 2457799999999998754 45899999987543211111224579999
Q ss_pred CCCCCCCeEEEEEeEeCC--CCceeeEEEEEEEe
Q psy15206 132 RITKEDRGAYYCVAQNGI--GRGARRKIEVKVEF 163 (232)
Q Consensus 132 ~~~~~~~g~y~C~~~~~~--~~~~~~~~~l~v~~ 163 (232)
+++.+|.|.|+|.+.+.. ....+..+.|.|..
T Consensus 158 ~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 158 PVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp ECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred CCccccCEEEEEEEECCCCcccCCCCCEEEEEec
Confidence 999999999999998753 22345667777764
No 277
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.69 E-value=5.2e-16 Score=108.88 Aligned_cols=141 Identities=18% Similarity=0.272 Sum_probs=92.2
Q ss_pred CcceEeecCCeEEEEEEecCCCCC---eEEEEeCcEee------------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIP---TISWRRNFKRL------------------------------------------ 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~---~~~W~~~~~~~------------------------------------------ 54 (232)
+..+.+.+|++++|.|.+.+.|.+ .+.|+|++...
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 667889999999999999987654 48999843211
Q ss_pred ------eeEEEEeeee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcE
Q psy15206 55 ------GRLHLAIPYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQT 121 (232)
Q Consensus 55 ------~~~~~~~~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~ 121 (232)
|.|.|..... ...+.+..++...........+..++.+.+.|.+.+.|.+.+.|++++..+......
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~ 165 (218)
T 4frw_A 86 AVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSF 165 (218)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEE
T ss_pred ccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceE
Confidence 2444433111 112222222221111233345567889999999999999999999998765432221
Q ss_pred E-----eeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEE
Q psy15206 122 I-----FTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKV 161 (232)
Q Consensus 122 ~-----~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 161 (232)
. ...+.|.|..+...|.|.|+|.+.|..+. ....+.+.+
T Consensus 166 ~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~-~~~~~t~~v 209 (218)
T 4frw_A 166 KHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLL-QDQRITHIL 209 (218)
T ss_dssp ECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCS-SCEEEEEEC
T ss_pred ecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCC-eEEEEEEEE
Confidence 1 12346999999999999999999998776 333344443
No 278
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.69 E-value=2.1e-16 Score=110.91 Aligned_cols=136 Identities=15% Similarity=0.233 Sum_probs=92.9
Q ss_pred CeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCc-----------------------------------------
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNF----------------------------------------- 51 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~----------------------------------------- 51 (232)
|.++.. + ++.+.+|++++|.|.+.+.+.+.+.|+|+.
T Consensus 2 ~~v~~~-~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 79 (213)
T 3mj8_L 2 YTLTQP-P-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQA 79 (213)
T ss_dssp CCBBCC-S-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred eeEEeC-C-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCCh
Confidence 444444 5 888999999999999999899999999811
Q ss_pred EeeeeEEEEeeee---------cCceeec----CCcEEecCCCCceEeecCCcEEEEeeeccC-CC-CeEEEEeCCeeeC
Q psy15206 52 KRLGRLHLAIPYT---------SPEAQVD----TPPVILNNSPQLSVAKEGQSVQLECHAEGH-PI-PTISWRRENNAIL 116 (232)
Q Consensus 52 ~~~~~~~~~~~~~---------~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~~~~~~ 116 (232)
.+.|.|.|..... ...|.|. .+|.+.. .+....+..|+.+.|.|.+.+. |+ +.+.|+++|..+.
T Consensus 80 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~-~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 158 (213)
T 3mj8_L 80 GDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTL-FPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPIT 158 (213)
T ss_dssp GGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEE-ECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred hhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEc-cCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccC
Confidence 0113566655221 3455555 4444433 2222233379999999999885 43 3899999998875
Q ss_pred CC---------CcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 117 PN---------GQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 117 ~~---------~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.. .......+.|.|..+..+|.|.|+|.+.|..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3mj8_L 159 QGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNT 202 (213)
T ss_dssp TTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEE
T ss_pred CCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCcc
Confidence 32 111122346889999999999999999997643
No 279
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.69 E-value=3.9e-16 Score=118.85 Aligned_cols=146 Identities=14% Similarity=0.158 Sum_probs=99.6
Q ss_pred eecCCcEEEEeeeccC---CC-CeEEEEeCCeeeCCCC---------cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCc
Q psy15206 86 AKEGQSVQLECHAEGH---PI-PTISWRRENNAILPNG---------QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRG 152 (232)
Q Consensus 86 ~~~g~~~~l~C~~~~~---~~-~~~~W~~~~~~~~~~~---------~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~ 152 (232)
+..|+.+.|.|.+.+. |. ..+.|++++..+.... ......+.|.|..+..+|.|.|+|.+.+..+..
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 6679999999999886 32 2699999986542111 111123469999999999999999999875532
Q ss_pred -eeeEEEE--EEEeccEEEeccceeeeeccCeEEEEEEeecCCC--CeEEEeeCCEEecC----------CCeEE----E
Q psy15206 153 -ARRKIEV--KVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPH--PILYWAKDGEIVVN----------DEYHS----I 213 (232)
Q Consensus 153 -~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~g~~~~~----------~~~~~----~ 213 (232)
..+.+.+ .+..+|.+.+.+.......|+.++|.|.+.|+++ +.|.|+|||..+.. +..|. +
T Consensus 260 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L 339 (376)
T 2aty_A 260 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKL 339 (376)
T ss_pred ceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEE
Confidence 2222222 4456788877766655556899999999999744 47999999976532 22222 2
Q ss_pred EEeccccCCceEEEEecC
Q psy15206 214 SNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 214 ~~~~~~~~d~g~Y~C~~~ 231 (232)
.+......|.|.|+|.|.
T Consensus 340 ~i~~~~~~~~~~YtC~v~ 357 (376)
T 2aty_A 340 NVQKSNWEAGNTFTCSVL 357 (376)
T ss_pred EEcHHHhCCCCcEEEEEE
Confidence 223333457899999974
No 280
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.68 E-value=6.1e-16 Score=110.77 Aligned_cols=150 Identities=20% Similarity=0.332 Sum_probs=97.1
Q ss_pred CCCceEeecCCcEEEEeeeccC--CCCeEEEEeCC--eee---C--------------CCCcEEee------CCeEEECC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGH--PIPTISWRREN--NAI---L--------------PNGQTIFT------GSTLQIPR 132 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~~---~--------------~~~~~~~~------~~~l~i~~ 132 (232)
.+....+.+|+++.|.|.+.+. +.+.+.|++.. ..+ . ...++... ..+|.|.+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (242)
T 1hxm_B 7 PQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHN 86 (242)
T ss_dssp CCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECS
T ss_pred CCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECC
Confidence 4566788899999999998775 55689999853 211 0 12233221 24799999
Q ss_pred CCCCCCeEEEEEeEeCCC-C-----ceeeEEEEEEEe-------ccEEEec-cceeeeeccCeEEEEEEeecC-CC-CeE
Q psy15206 133 ITKEDRGAYYCVAQNGIG-R-----GARRKIEVKVEF-------APIVTVQ-STRIGQALHHDMDLDCHIEAY-PH-PIL 196 (232)
Q Consensus 133 ~~~~~~g~y~C~~~~~~~-~-----~~~~~~~l~v~~-------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~-~~~ 196 (232)
++.+|.|.|.|.+.+... . .......|.|.. +|.+.+. +....+..|+.+.|.|.+.|+ |. +.+
T Consensus 87 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~v 166 (242)
T 1hxm_B 87 VEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKI 166 (242)
T ss_dssp CCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEEE
T ss_pred CCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeEE
Confidence 999999999999987531 1 112234666664 2333222 333334569999999999886 54 689
Q ss_pred EEeeCCE-EecC---------CCeE----EEEEeccccCCceEEEEecC
Q psy15206 197 YWAKDGE-IVVN---------DEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 197 ~W~~~g~-~~~~---------~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.|+++|. .+.. ++.| .+.+..... | |.|+|.|.
T Consensus 167 ~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~ 213 (242)
T 1hxm_B 167 HWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVR 213 (242)
T ss_dssp EEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEE
T ss_pred EEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEE
Confidence 9999986 4421 2223 234444332 4 99999874
No 281
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.68 E-value=8e-16 Score=110.50 Aligned_cols=148 Identities=14% Similarity=0.197 Sum_probs=94.0
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCCCCe-----EEEEeCc-----------------------------------
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHPIPT-----ISWRRNF----------------------------------- 51 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~-----~~W~~~~----------------------------------- 51 (232)
.|.+.+.++..+.+.+|++++|.|.+.+.|.+. +.|+++.
T Consensus 2 ~~~v~v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T 3pv7_A 2 DLKVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGD 81 (248)
T ss_dssp CEEEECSTTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTB
T ss_pred ceEEEEeCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCc
Confidence 466766657778899999999999998766554 9999831
Q ss_pred ----------EeeeeEEEEeee------ecCceeecCCcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeCCe
Q psy15206 52 ----------KRLGRLHLAIPY------TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRENN 113 (232)
Q Consensus 52 ----------~~~~~~~~~~~~------~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~ 113 (232)
.+.|.|.|.... ..+.|.|..+|.+... +. .....|..+.|.|.+.+ .|.+ .+.|++++.
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~-~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~ 159 (248)
T 3pv7_A 82 ASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLL-LD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQ 159 (248)
T ss_dssp CCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEE-CC---------CEEEEEEEEEBSSCCEEEEEEECS
T ss_pred EEEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEe-cC-CccccCCCcEEEEEEccEECCCeEEEEEECCc
Confidence 011467776522 2566777777665432 22 23345677889999998 7888 899999986
Q ss_pred eeCC----------------CCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC-ceeeEEEEEE
Q psy15206 114 AILP----------------NGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR-GARRKIEVKV 161 (232)
Q Consensus 114 ~~~~----------------~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~-~~~~~~~l~v 161 (232)
.+.. ........+.|.+.....+|.|.|+|.+.|..+. .....+.|.|
T Consensus 160 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 160 KFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp SSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred cCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 3321 1111112346888889999999999999997654 3455566666
No 282
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.68 E-value=1.2e-16 Score=113.96 Aligned_cols=146 Identities=13% Similarity=0.172 Sum_probs=94.6
Q ss_pred eecCCcEEEEeeeccCC----CCeEEEEeCCeeeCCCC---------cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC-
Q psy15206 86 AKEGQSVQLECHAEGHP----IPTISWRRENNAILPNG---------QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR- 151 (232)
Q Consensus 86 ~~~g~~~~l~C~~~~~~----~~~~~W~~~~~~~~~~~---------~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~- 151 (232)
+..|+.+.|.|.+.|.. ...+.|+++|..+.... ......+.|.|.....+|.|.|.|.+.+..+.
T Consensus 36 l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~ 115 (240)
T 4acp_A 36 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 115 (240)
T ss_dssp HSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----
T ss_pred cccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCc
Confidence 44699999999999864 23699999998763321 11111246777777777889999999987653
Q ss_pred ceeeEEEE--EEEeccEEEeccceeeeeccCeEEEEEEeecC-CCC-eEEEeeCCEEec----------CCCeEEEE---
Q psy15206 152 GARRKIEV--KVEFAPIVTVQSTRIGQALHHDMDLDCHIEAY-PHP-ILYWAKDGEIVV----------NDEYHSIS--- 214 (232)
Q Consensus 152 ~~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~g~~~~----------~~~~~~~~--- 214 (232)
...+.+.+ .+..+|.+.+.+.......|+.+.|.|.+.|+ |.+ .+.|+|||..+. .+..|.+.
T Consensus 116 ~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L 195 (240)
T 4acp_A 116 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKL 195 (240)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEE
T ss_pred cccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEE
Confidence 22333322 23467877766554434458999999999995 443 799999998753 12333322
Q ss_pred -EeccccCCceEEEEecC
Q psy15206 215 -NFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 215 -~~~~~~~d~g~Y~C~~~ 231 (232)
+......+.|.|+|.|.
T Consensus 196 ~v~~~~~~~~~~ytC~V~ 213 (240)
T 4acp_A 196 TVDKSRWQQGNVFSCSVM 213 (240)
T ss_dssp EEEHHHHHTTCCEEEEEE
T ss_pred EEChHHhCCCCEEEEEEE
Confidence 22222256899999974
No 283
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.68 E-value=6.8e-16 Score=107.64 Aligned_cols=130 Identities=20% Similarity=0.272 Sum_probs=86.8
Q ss_pred eecCCeEEEEEEecCCCCCeEEEEeCcEee--------------------eeEEEEeeee-c--CceeecC---------
Q psy15206 25 AKEGQSVQLECHAEGHPIPTISWRRNFKRL--------------------GRLHLAIPYT-S--PEAQVDT--------- 72 (232)
Q Consensus 25 ~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~--------------------~~~~~~~~~~-~--~~l~v~~--------- 72 (232)
+.+|++++|.|.+ |.+.|.|+|++..+ |.|.|..... . +.|.+..
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~v~v~~~~~~~~~~~ 91 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMGSADDAKKD 91 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEEESSCCCEEEEEGGGCCEEEEEEESSSSCCCCEEEEEEC---------
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCCCCCCCeEEeCCCCcCCCEEEEEEecCCCCeeEEEEEEEecccccccc
Confidence 4689999999999 78899999976433 3555553211 1 2233220
Q ss_pred ---------------------CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCC---CcEEeeCCeE
Q psy15206 73 ---------------------PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPN---GQTIFTGSTL 128 (232)
Q Consensus 73 ---------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~---~~~~~~~~~l 128 (232)
.+..+. ........+|+.+.|.|. +.|.+.+.|++++..+... ......++.|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~~L 168 (204)
T 1sy6_A 92 AAKKDDAKKDDAKKDGSDGNEEMGGIT-QTPYKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDEDHL 168 (204)
T ss_dssp ----------------------------CCCCEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEETTEE
T ss_pred cccccccccccccccccccccccccee-cCCceeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCCCEE
Confidence 011111 111223338999999998 6788899999999887543 1233357899
Q ss_pred EECCC-CCCCCeEEEEEeEeCCCCceeeEEEEE
Q psy15206 129 QIPRI-TKEDRGAYYCVAQNGIGRGARRKIEVK 160 (232)
Q Consensus 129 ~i~~~-~~~~~g~y~C~~~~~~~~~~~~~~~l~ 160 (232)
.|.++ ..+|+|.|+|.+.|..|...+..+.+.
T Consensus 169 ~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~ 201 (204)
T 1sy6_A 169 SLKEFSELEQSGYYVCYPRGSKPEDANFYLYLR 201 (204)
T ss_dssp EETTCCHHHHCEEEEEEETTSCGGGSSCEEEEE
T ss_pred EEeeCCccccCEEEEEEeccCCCCceeEEEEEE
Confidence 99999 999999999999998875444444444
No 284
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.67 E-value=2.6e-17 Score=122.89 Aligned_cols=141 Identities=15% Similarity=0.203 Sum_probs=93.5
Q ss_pred CcEEEEeeeccC-C-CCeEEEEeCCeeeCCCCcE---E------eeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 90 QSVQLECHAEGH-P-IPTISWRRENNAILPNGQT---I------FTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 90 ~~~~l~C~~~~~-~-~~~~~W~~~~~~~~~~~~~---~------~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
+.+.|.|.+.+. | .+.+.|+++|..+...... . ...+.|.|.....+|.|.|+|.+.+..+. ....+.
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~-~~~~~~ 103 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHT-FEDSTK 103 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEE-EEEEEC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCC-cceeee
Confidence 699999999885 4 3689999999876532211 1 11235677777777999999999987543 222221
Q ss_pred EE---EEeccEEEe-ccceeeeeccCeEEEEEEeecC-CCC---eEEEeeCC-EEecC---------CCeE----EEEEe
Q psy15206 159 VK---VEFAPIVTV-QSTRIGQALHHDMDLDCHIEAY-PHP---ILYWAKDG-EIVVN---------DEYH----SISNF 216 (232)
Q Consensus 159 l~---v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~~---~~~W~~~g-~~~~~---------~~~~----~~~~~ 216 (232)
+. +...|.+.. .+....+..|+.+.|.|.+.|. |.+ .|.|+|++ ..+.. +..+ .|.+.
T Consensus 104 ~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~ 183 (323)
T 2wqr_A 104 KCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVG 183 (323)
T ss_dssp CCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECC
T ss_pred cCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEEC
Confidence 10 112344433 3444456789999999999886 455 89999975 33321 1222 56777
Q ss_pred ccccCCceEEEEecC
Q psy15206 217 GTSEGTTGSLQCKVP 231 (232)
Q Consensus 217 ~~~~~d~g~Y~C~~~ 231 (232)
++...|+|.|+|.|.
T Consensus 184 ~~~~~D~G~Y~C~a~ 198 (323)
T 2wqr_A 184 TRDWIEGETYQCRVT 198 (323)
T ss_dssp HHHHHTTCCEEEEEE
T ss_pred HHHccCCCCEEEEEE
Confidence 778899999999874
No 285
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.67 E-value=3.5e-16 Score=108.91 Aligned_cols=139 Identities=15% Similarity=0.236 Sum_probs=91.2
Q ss_pred CcceEeecCCeEEEEEEecCCCC-----CeEEEEe-CcE------------------------------eeeeEEEEeee
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPI-----PTISWRR-NFK------------------------------RLGRLHLAIPY 63 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~-----~~~~W~~-~~~------------------------------~~~~~~~~~~~ 63 (232)
+.++.+.+|++++|.|.+.+.|. +.+.|+| +.. +.|.|.|....
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 88 (202)
T 3bp6_B 9 KEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVIC 88 (202)
T ss_dssp CSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEe
Confidence 55788999999999999998775 8899999 111 11466665522
Q ss_pred e------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeC---CeEEECCCC
Q psy15206 64 T------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTG---STLQIPRIT 134 (232)
Q Consensus 64 ~------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~---~~l~i~~~~ 134 (232)
. .+.|.|..++.... .......+|+.+.|.|.+.|.|.+.+.|++++..+... ...... ..+.+..+.
T Consensus 89 ~~~~~~~~~~l~V~~~~~~p~--~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~i~~v~ 165 (202)
T 3bp6_B 89 GAAWDYKYLTVKVKASYMRID--TRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTS-HIRTPEGLYQVTSVLRLK 165 (202)
T ss_dssp TTEEEEEEEEEEEEBCCCCEE--EEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEE-EEECTTSCEEEEEEEEEC
T ss_pred CCCcceEEEEEEecCCCCccc--EEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCc-eeeCCCCCEEEEEEEEEE
Confidence 2 44555554321100 00113457999999999999999999999987653211 111111 245667888
Q ss_pred CCCCeEEEEEeEeCCCCceeeEEEEEEE
Q psy15206 135 KEDRGAYYCVAQNGIGRGARRKIEVKVE 162 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 162 (232)
..|.|.|+|.+.|..+. ....+.+.|.
T Consensus 166 ~~d~G~Y~C~a~N~~g~-~~~~~~l~v~ 192 (202)
T 3bp6_B 166 PQPSRNFSCMFWNAHMK-ELTSAIIDPL 192 (202)
T ss_dssp CCTTCCEEEEEEETTTT-EEEEEEECC-
T ss_pred cCCCCEEEEEEEcCCcc-cccEEEEEec
Confidence 99999999999999887 4455555543
No 286
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.66 E-value=3.8e-15 Score=104.68 Aligned_cols=148 Identities=20% Similarity=0.266 Sum_probs=105.8
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC--cEEee----CCeEEECCCCCCCCeEEEEEeEeCCCCce
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG--QTIFT----GSTLQIPRITKEDRGAYYCVAQNGIGRGA 153 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~--~~~~~----~~~l~i~~~~~~~~g~y~C~~~~~~~~~~ 153 (232)
.+....+..|+.+.|.|.+.|.|.+.+.|++++..+.... +.... .+.|.|.++...|.|.|.|.+.|..|. .
T Consensus 24 ~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~ 102 (215)
T 3mtr_A 24 GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQ-E 102 (215)
T ss_dssp CCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCE-E
T ss_pred CCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCc-e
Confidence 4556778899999999999999999999999998876542 22222 457999999999999999999999887 4
Q ss_pred eeEEEEEEEeccEEEeccceeeeeccCeEEEEEEee----cCCCC--eEEEeeCCEEecC---------CCeEEEEEecc
Q psy15206 154 RRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIE----AYPHP--ILYWAKDGEIVVN---------DEYHSISNFGT 218 (232)
Q Consensus 154 ~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~--~~~W~~~g~~~~~---------~~~~~~~~~~~ 218 (232)
...+.+.+..+|....... ....+..+.|.|... +.|.. .+.|.+++...-. .....+.+.+.
T Consensus 103 ~~~~~l~v~~~P~~p~~~~--~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L 180 (215)
T 3mtr_A 103 SLEFILVQADTPSSPSIDQ--VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGL 180 (215)
T ss_dssp EEEEEEEECCCCCCCEEEE--EEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECC
T ss_pred EEEEEEEECCCCCCCcceE--EEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCC
Confidence 5667777766554322111 123567789998742 33333 3788887643110 11146667788
Q ss_pred ccCCceEEEEec
Q psy15206 219 SEGTTGSLQCKV 230 (232)
Q Consensus 219 ~~~d~g~Y~C~~ 230 (232)
...+.|.|+|.|
T Consensus 181 ~~~~~y~~~~~A 192 (215)
T 3mtr_A 181 KPETTYAVRLAA 192 (215)
T ss_dssp CTTCEEEEEEEE
T ss_pred CCCCEEEEEEEE
Confidence 889999999987
No 287
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.66 E-value=1.7e-15 Score=107.59 Aligned_cols=150 Identities=21% Similarity=0.330 Sum_probs=95.3
Q ss_pred CCCceEeecCCcEEEEeeeccC--CCCeEEEEeCC--ee---eC-------------CCCcEEee------CCeEEECCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGH--PIPTISWRREN--NA---IL-------------PNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~---~~-------------~~~~~~~~------~~~l~i~~~ 133 (232)
.+....+.+|+++.|.|.+.+. +...+.|++.. .. +. ...++... ..+|.|.++
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (230)
T 1ypz_F 7 PEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSL 86 (230)
T ss_dssp SCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSC
T ss_pred cCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcC
Confidence 4556778899999999998764 45679999853 11 10 12233222 127999999
Q ss_pred CCCCCeEEEEEeEeC--CC-CceeeEEEEEEE---------eccEEEec-cceeeeeccCeEEEEEEeecC-CC-CeEEE
Q psy15206 134 TKEDRGAYYCVAQNG--IG-RGARRKIEVKVE---------FAPIVTVQ-STRIGQALHHDMDLDCHIEAY-PH-PILYW 198 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~--~~-~~~~~~~~l~v~---------~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W 198 (232)
+.+|+|.|.|.+.+. .. ........|.|. .+|...+. +....+..|+.++|.|.+.|+ |. +.+.|
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W 166 (230)
T 1ypz_F 87 EEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVYW 166 (230)
T ss_dssp CGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEEEE
T ss_pred ChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEEEE
Confidence 999999999999874 11 111233466665 12332222 333334568999999999886 65 58999
Q ss_pred ee-CCEEecC---------CCeE----EEEEeccccCCceEEEEecC
Q psy15206 199 AK-DGEIVVN---------DEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 199 ~~-~g~~~~~---------~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
++ ||..+.. +..| .+.+..... + |.|+|.|.
T Consensus 167 ~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~ 211 (230)
T 1ypz_F 167 KEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVK 211 (230)
T ss_dssp ECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEE
T ss_pred EccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEE
Confidence 99 7765432 2233 234444433 4 99999874
No 288
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.66 E-value=1.6e-15 Score=94.46 Aligned_cols=91 Identities=26% Similarity=0.496 Sum_probs=73.3
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee----CCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT----GSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
||.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....+.... ...|.|.++..+|.|.|+|.+.|.
T Consensus 13 pP~f~~-~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 13 PPCFLR-FPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCEEEe-CCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 455554 567788899999999999999999999999999988766554432 237999999999999999999999
Q ss_pred CCCceeeEEEEEEEecc
Q psy15206 149 IGRGARRKIEVKVEFAP 165 (232)
Q Consensus 149 ~~~~~~~~~~l~v~~~p 165 (232)
.|. ....+.|.|..+|
T Consensus 92 ~G~-~~~~~~l~V~~pP 107 (107)
T 3knb_B 92 AGE-AYAAAAVTVLEPP 107 (107)
T ss_dssp TEE-EEEEEEEEEEC--
T ss_pred CCE-EEEEEEEEEEcCC
Confidence 887 5567778877655
No 289
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.65 E-value=1.2e-15 Score=108.04 Aligned_cols=142 Identities=12% Similarity=0.180 Sum_probs=86.2
Q ss_pred CcceEeecCCeEEEEEEecCCCC---CeEEEEeCcE--------------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPI---PTISWRRNFK-------------------------------------------- 52 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~---~~~~W~~~~~-------------------------------------------- 52 (232)
..++.+.+|++++|.|.+.+.+. ..+.|+|++.
T Consensus 11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 90 (226)
T 4f80_A 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV 90 (226)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence 45688999999999999986543 3799998431
Q ss_pred ---eeeeEEEEeeee----cCceeecCCcEEecCCCCceEeecCCcEEEEeeecc-CCCCeEEEEeCCeeeCCCCc---E
Q psy15206 53 ---RLGRLHLAIPYT----SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIPTISWRRENNAILPNGQ---T 121 (232)
Q Consensus 53 ---~~~~~~~~~~~~----~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~~~~~~~~~---~ 121 (232)
+.|.|.|..... ...+.+..++... .......+.+|+.+.+.|.+.+ .|.|.+.|+++++.+..... .
T Consensus 91 ~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~-~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~ 169 (226)
T 4f80_A 91 TASDSGKYLCYFQDGDFYEKALVELKVAALGS-DLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVV 169 (226)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEBCCC-CCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCE
T ss_pred chHHCeeEEEEEECCCcEEEEEEEEeecccee-cccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEE
Confidence 113555554222 2233333222211 1233345678999999999988 58899999997655432211 1
Q ss_pred EeeCC---eEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEe
Q psy15206 122 IFTGS---TLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEF 163 (232)
Q Consensus 122 ~~~~~---~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 163 (232)
...++ .+.+..++.+|.|.|+|.+.|..+. ..+...+.|..
T Consensus 170 ~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~-~~~~~~v~v~e 213 (226)
T 4f80_A 170 ADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLG-LEKTASISIAD 213 (226)
T ss_dssp ECTTSCEEEEEEEEECC----CEEEEEEETTTT-EEEEEEECCCT
T ss_pred ECCCCcEEEEEEEEechhcCcEEEEEEEeCCCC-eEEEEEEEECC
Confidence 11122 2334467789999999999999877 55566666543
No 290
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.64 E-value=3e-15 Score=105.00 Aligned_cols=132 Identities=18% Similarity=0.275 Sum_probs=90.6
Q ss_pred CeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCc--E--------------------------------------
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNF--K-------------------------------------- 52 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~--~-------------------------------------- 52 (232)
|.|+.. +.++.+.+|++++|.|.+.+.|.+.+.|+|+. .
T Consensus 2 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3nl4_L 2 VVMTQT-PASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLEC 80 (213)
T ss_dssp CCEEEE-CSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred ccEEeC-CCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCCh
Confidence 455555 77889999999999999999889999999831 0
Q ss_pred -eeeeEEEEeeee---------cCceee---cCCcEEecCCCCceEeecCCcEEEEeeecc-CCCCeEEEEeCCeeeCCC
Q psy15206 53 -RLGRLHLAIPYT---------SPEAQV---DTPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIPTISWRRENNAILPN 118 (232)
Q Consensus 53 -~~~~~~~~~~~~---------~~~l~v---~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~W~~~~~~~~~~ 118 (232)
+.|.|.|..... ...|.| ..+|.+.. .+....+..|+.+.|.|.+.+ .|.+.+.|++++..+...
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~-~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~ 159 (213)
T 3nl4_L 81 ADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLI-FPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTG 159 (213)
T ss_dssp GGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEE-ECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSS
T ss_pred HHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEE-eCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCC
Confidence 113555554221 223444 22333322 122223446899999999988 888899999999876432
Q ss_pred C-----------cEEeeCCeEEECCCCCCCCeEEEEEeE
Q psy15206 119 G-----------QTIFTGSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 119 ~-----------~~~~~~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
. ......+.|.|..+..+|.|.|+|.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 160 IENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred eecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 1 111123568899999999999999998
No 291
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.64 E-value=7.6e-15 Score=105.94 Aligned_cols=143 Identities=18% Similarity=0.255 Sum_probs=92.4
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCcE--e--------------------ee--------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNFK--R--------------------LG-------------------- 55 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~~--~--------------------~~-------------------- 55 (232)
|.++.+.+|++++|.|.+.+.+ .+.+.|+|+.. . .+
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL 86 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC
Confidence 6778899999999999999865 67999998310 0 01
Q ss_pred ------eEEEEeeee-----------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCC-----eEEEEe--C
Q psy15206 56 ------RLHLAIPYT-----------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIP-----TISWRR--E 111 (232)
Q Consensus 56 ------~~~~~~~~~-----------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-----~~~W~~--~ 111 (232)
.|.|..... ...|.|..++.+.. .+....+.+|+++.|.|.+.+.+.+ .+.|++ +
T Consensus 87 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~-~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~ 165 (256)
T 1nqb_A 87 TSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQ-TPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKP 165 (256)
T ss_dssp CGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEE-ECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECT
T ss_pred ChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEe-cCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECC
Confidence 333332111 12344544443322 3455678899999999999887765 899999 5
Q ss_pred CeeeC------------CCCcEEe----eCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEe
Q psy15206 112 NNAIL------------PNGQTIF----TGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEF 163 (232)
Q Consensus 112 ~~~~~------------~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 163 (232)
+..+. ...++.. ....|.|.+++.+|+|.|+|.+.+...........|.|..
T Consensus 166 g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 166 GQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp TSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 54331 0122221 1247999999999999999999875332223344555543
No 292
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=1.3e-14 Score=104.11 Aligned_cols=130 Identities=22% Similarity=0.330 Sum_probs=87.7
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCcE---------------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNFK--------------------------------------------- 52 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~~--------------------------------------------- 52 (232)
+.++.+.+|++++|.|.+.+.| .+.+.|+|+..
T Consensus 9 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (247)
T 2ghw_B 9 SGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL 88 (247)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC
Confidence 4668899999999999999876 67899998210
Q ss_pred ---eeeeEEEEeeee--------cCceeecCCc--------------EEecCCCCceEeecCCcEEEEeeeccCCCCeEE
Q psy15206 53 ---RLGRLHLAIPYT--------SPEAQVDTPP--------------VILNNSPQLSVAKEGQSVQLECHAEGHPIPTIS 107 (232)
Q Consensus 53 ---~~~~~~~~~~~~--------~~~l~v~~~p--------------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 107 (232)
+.|.|.|..... ...|.|..++ ..+...+....+.+|+++.|.|.+.+.+.+.+.
T Consensus 89 ~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~ 168 (247)
T 2ghw_B 89 RAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLA 168 (247)
T ss_dssp CGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEE
T ss_pred CHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEE
Confidence 012455544221 2245555431 111113445667899999999999998888999
Q ss_pred EEe--CCeeeC------------CCCcEEee----CCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 108 WRR--ENNAIL------------PNGQTIFT----GSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 108 W~~--~~~~~~------------~~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
|++ ++..+. ...++... ..+|.|.++..+|.|.|+|.+.+..
T Consensus 169 W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 228 (247)
T 2ghw_B 169 WYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW 228 (247)
T ss_dssp EEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred EEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence 999 444320 01222221 2369999999999999999998753
No 293
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.63 E-value=5.5e-15 Score=105.43 Aligned_cols=133 Identities=20% Similarity=0.303 Sum_probs=89.8
Q ss_pred eecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcE------------------------------------------
Q psy15206 15 ILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK------------------------------------------ 52 (232)
Q Consensus 15 i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~------------------------------------------ 52 (232)
+... |.++.+.+|++++|.|. .+.+.+.+.|+|+..
T Consensus 3 v~q~-p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 80 (238)
T 2p1y_A 3 VTQS-PRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA 80 (238)
T ss_dssp EEEE-CSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred ceEC-ccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence 3444 77888999999999999 677889999998410
Q ss_pred ---eeeeEEEEeeee-----------cCceeecCCcE-----------EecCCCCceEeecCCcEEEEeeeccCCCCeEE
Q psy15206 53 ---RLGRLHLAIPYT-----------SPEAQVDTPPV-----------ILNNSPQLSVAKEGQSVQLECHAEGHPIPTIS 107 (232)
Q Consensus 53 ---~~~~~~~~~~~~-----------~~~l~v~~~p~-----------~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 107 (232)
+.|.|.|..... ...|.|...+. .+...+....+.+|+++.|.|.+.+.+.+.+.
T Consensus 81 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~ 160 (238)
T 2p1y_A 81 TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFP 160 (238)
T ss_dssp CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEE
T ss_pred CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEE
Confidence 012455544211 22455543321 11223455678899999999999998888999
Q ss_pred EEeCCe--e---e---------CCCCcEEee------CCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 108 WRRENN--A---I---------LPNGQTIFT------GSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 108 W~~~~~--~---~---------~~~~~~~~~------~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
|++++. . + ....++... ...|.|.++..+|+|.|+|.+.|..
T Consensus 161 W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 161 WYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 999642 1 0 001222221 2479999999999999999999873
No 294
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.63 E-value=5.5e-15 Score=104.26 Aligned_cols=147 Identities=18% Similarity=0.317 Sum_probs=93.5
Q ss_pred CcceEeecCCeEEEEEEecCCCC-----CeEEEEeCcEe-----------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPI-----PTISWRRNFKR----------------------------------------- 53 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~-----~~~~W~~~~~~----------------------------------------- 53 (232)
..++.+.+|++++|.|.+.+.+. +.+.|++++..
T Consensus 2 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~ 81 (222)
T 4i0k_A 2 EDPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRV 81 (222)
T ss_dssp CCCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCG
T ss_pred CCCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccc
Confidence 34677899999999999987653 78999984311
Q ss_pred --eeeEEEEeeee-----cCceeecCC---cEEecCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCeeeCCCC-cE
Q psy15206 54 --LGRLHLAIPYT-----SPEAQVDTP---PVILNNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENNAILPNG-QT 121 (232)
Q Consensus 54 --~~~~~~~~~~~-----~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~~-~~ 121 (232)
.|.|.|..... .+.|.|..+ |.+.. .+ ...+..|+.+.|.|.+ .+.|.+.+.|++++....... ..
T Consensus 82 ~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~ 159 (222)
T 4i0k_A 82 TDEGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTL-EP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTT 159 (222)
T ss_dssp GGCSCEEEEEEECCCCCCCCCCCCCBCCCCCEEEC-CC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEE
T ss_pred ccCEEEEEEEEeCCCceEEEEEEEEcCCCCCcEEe-CC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcce
Confidence 13556655322 444555433 33332 22 3356689999999999 778889999998443332221 11
Q ss_pred Ee---eCC---eEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEe
Q psy15206 122 IF---TGS---TLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTV 169 (232)
Q Consensus 122 ~~---~~~---~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~ 169 (232)
.. ..+ .|.|.++..+|.|.|+|.+.|..+. ....+.+.|..+|....
T Consensus 160 ~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~ 212 (222)
T 4i0k_A 160 SQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQ-QDAHGSVTITGQPLTFP 212 (222)
T ss_dssp EEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTT-EEEEEEEECCC------
T ss_pred eEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCC-CceEEEEEEeCCccccC
Confidence 11 122 3788999999999999999999887 66777888877665443
No 295
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.63 E-value=9.7e-15 Score=106.56 Aligned_cols=136 Identities=18% Similarity=0.301 Sum_probs=90.2
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcE---------------------------------------
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK--------------------------------------- 52 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~--------------------------------------- 52 (232)
.+.+... |.++.+.+|++++|.|.+.+.|.+.+.|+|+..
T Consensus 12 ~~~v~~~-p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 90 (276)
T 3auv_A 12 DIQMTQS-PSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 90 (276)
T ss_dssp CCCEEEE-CSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ceeEEeC-CCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCC
Confidence 4556655 778889999999999999998888999998321
Q ss_pred --eeeeEEEEeeee-------cCceeecCCcE-------------EecCCCCceEeecCCcEEEEeeeccCC--CCeEEE
Q psy15206 53 --RLGRLHLAIPYT-------SPEAQVDTPPV-------------ILNNSPQLSVAKEGQSVQLECHAEGHP--IPTISW 108 (232)
Q Consensus 53 --~~~~~~~~~~~~-------~~~l~v~~~p~-------------~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~W 108 (232)
+.|.|.|..... ...|.|..++. .....+....+.+|+++.|.|.+.+.+ .+.+.|
T Consensus 91 ~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W 170 (276)
T 3auv_A 91 PEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHW 170 (276)
T ss_dssp GGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEE
T ss_pred hhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEE
Confidence 012444443211 23455554321 111123456778899999999998866 478999
Q ss_pred EeCC--eee-----------------CCCCcEEee------CCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 109 RREN--NAI-----------------LPNGQTIFT------GSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 109 ~~~~--~~~-----------------~~~~~~~~~------~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
++++ ..+ ....++... ...|.|.+++.+|+|.|+|.+.|.
T Consensus 171 ~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 171 VRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 9963 111 011233222 127999999999999999999997
No 296
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.63 E-value=9e-15 Score=101.72 Aligned_cols=132 Identities=17% Similarity=0.220 Sum_probs=89.6
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe----------------------------eeeEEEE
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR----------------------------LGRLHLA 60 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~----------------------------~~~~~~~ 60 (232)
+..+|.|... |. ..+.+|++++|.|.+.+ +.+.+.|+|++.. .|.|+|.
T Consensus 5 ~~~~P~i~~~-p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~ 81 (201)
T 1nkr_A 5 VHRKPSLLAH-PG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCY 81 (201)
T ss_dssp --CCCEEEEE-SC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEE
T ss_pred cCCCCeEEEE-cC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEe
Confidence 3568888877 44 77899999999999975 7789999995421 1467776
Q ss_pred eeee-----------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC-cEEe--
Q psy15206 61 IPYT-----------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG-QTIF-- 123 (232)
Q Consensus 61 ~~~~-----------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~-~~~~-- 123 (232)
.... .+.|.|.. +|.+.. .+. ..+.+|+.+.|.|.+.+ +.+.+.|+++|..+.... ....
T Consensus 82 a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~-~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~ 158 (201)
T 1nkr_A 82 GSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSA-QPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVN 158 (201)
T ss_dssp EEBTTBTTCCCCCCCCEEEEEECSSCCCEEEE-ESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEET
T ss_pred EecCCCCccccCCCCCEEEEeeccCCCCceec-CCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccC
Confidence 5321 22455543 233332 222 35778999999999876 567899999987653211 1111
Q ss_pred --eCCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 124 --TGSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 124 --~~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
....|.|.+++ |.|.|+|.+.+.
T Consensus 159 ~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 159 GTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp TEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred CceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 14578999998 999999999864
No 297
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.63 E-value=3.6e-15 Score=104.54 Aligned_cols=131 Identities=15% Similarity=0.259 Sum_probs=89.1
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEeCcE-----------------------------------------eeeeEE
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK-----------------------------------------RLGRLH 58 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~-----------------------------------------~~~~~~ 58 (232)
|.++.+.+|++++|.|.+.+.|.+.+.|+|+.. +.|.|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYF 87 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEE
Confidence 677889999999999999998888999997311 002455
Q ss_pred EEeeee-------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeCCeeeCCCCcE-----
Q psy15206 59 LAIPYT-------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRENNAILPNGQT----- 121 (232)
Q Consensus 59 ~~~~~~-------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~~~~~~~~~----- 121 (232)
|..... ...|.|.. +|.+....+.. ....|+.+.|.|.+.+ .|.+ .+.|+++|..+......
T Consensus 88 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~-~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 166 (213)
T 3d9a_L 88 CQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 166 (213)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCC
T ss_pred EeeecCCcceeCCCEEEEEecCCCCceeEeECCCh-hhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCc
Confidence 544221 22455543 44443322222 2336889999999987 5555 79999999877543111
Q ss_pred ------EeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 122 ------IFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 122 ------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
....+.|.|.++..+|.|.|+|.+.|....
T Consensus 167 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3d9a_L 167 DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 202 (213)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred cCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCC
Confidence 111237999999999999999999996543
No 298
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.62 E-value=1.6e-14 Score=101.83 Aligned_cols=145 Identities=20% Similarity=0.326 Sum_probs=90.9
Q ss_pred CcceEeecCCeEEEEEEecCCC-----CCeEEEEeCcE------------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP-----IPTISWRRNFK------------------------------------------ 52 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p-----~~~~~W~~~~~------------------------------------------ 52 (232)
+..+.+.+|++++|.|.+.+.| ...+.|++++.
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 5667899999999999997655 44899998420
Q ss_pred ---eeeeEEEEeee-----ecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeC-CeeeCCCCcEEe
Q psy15206 53 ---RLGRLHLAIPY-----TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRE-NNAILPNGQTIF 123 (232)
Q Consensus 53 ---~~~~~~~~~~~-----~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~-~~~~~~~~~~~~ 123 (232)
+.|.|.|.... ..+.|.|..++.... .........|+.+.|.|.+.|.|.+.+.|+++ +..+........
T Consensus 88 ~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~~-~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~ 166 (222)
T 3sbw_C 88 KLQDAGVYRCMISYGGADYKRITVKVNAPYNKIN-QRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTN 166 (222)
T ss_dssp CGGGCEEEEEEEESSSEEEEEEEEEEEBCCCCCE-EEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEE
T ss_pred ccccCeEEEEEEEeCCCceeEEEEEEECCCCCCC-ceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEE
Confidence 11356665422 244555654432211 01112456799999999999999999999998 444332111101
Q ss_pred ---eCCeE---EECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccE
Q psy15206 124 ---TGSTL---QIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPI 166 (232)
Q Consensus 124 ---~~~~l---~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 166 (232)
..+.+ ....+...|.|.|+|.+.|..+. ....+.+.|..+|.
T Consensus 167 ~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~-~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 167 SKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPE-ENHTAELVIPELPL 214 (222)
T ss_dssp CC----CEEEEEEEEEECCTTCEEEEEEEETTTT-EEEEEEEECCCC--
T ss_pred EcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccc-eeeEEEEEecCCcc
Confidence 11111 22245678999999999999887 55667777765554
No 299
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.62 E-value=1.7e-14 Score=103.62 Aligned_cols=134 Identities=17% Similarity=0.336 Sum_probs=88.6
Q ss_pred CeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcE----------------------------------------
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK---------------------------------------- 52 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~---------------------------------------- 52 (232)
+.+... +.++.+.+|++++|.|.+.+.|.+.+.|+|+..
T Consensus 5 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 5 IVLIQS-TSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ 83 (250)
T ss_dssp CCEECS-CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred eeEEec-CCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh
Confidence 344444 677889999999999999998888999998310
Q ss_pred -eeeeEEEEeee-------ecCceeecCCc------------------EEecCCCCceEeecCCcEEEEeeeccCC--CC
Q psy15206 53 -RLGRLHLAIPY-------TSPEAQVDTPP------------------VILNNSPQLSVAKEGQSVQLECHAEGHP--IP 104 (232)
Q Consensus 53 -~~~~~~~~~~~-------~~~~l~v~~~p------------------~~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~ 104 (232)
+.|.|.|.... ....|.|..++ ......+....+.+|+++.|.|.+.+.+ .+
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 163 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSS 163 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGS
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCC
Confidence 11355555421 13345554421 1111134456688899999999998866 67
Q ss_pred eEEEEeC--CeeeCC-----------------CCcEEee------CCeEEECCCCCCCCeEEEEEeEe
Q psy15206 105 TISWRRE--NNAILP-----------------NGQTIFT------GSTLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 105 ~~~W~~~--~~~~~~-----------------~~~~~~~------~~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+.|+++ +..+.. ..++... ..+|.|.++..+|+|.|.|.+.+
T Consensus 164 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 164 WMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 8999987 332210 1122221 12699999999999999999986
No 300
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.62 E-value=7e-15 Score=103.08 Aligned_cols=136 Identities=18% Similarity=0.264 Sum_probs=90.8
Q ss_pred CeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCc-----------------------------------------
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNF----------------------------------------- 51 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~----------------------------------------- 51 (232)
|.|+.. +..+.+.+|++++|.|.+.+.|.+.+.|+|+.
T Consensus 2 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3r06_A 2 IQMTQS-PSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLES 80 (213)
T ss_dssp CCEEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CeeEeC-CCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCc
Confidence 455555 77888999999999999999889999999821
Q ss_pred EeeeeEEEEeeee-------cCceee---cCCcEEecCCCCceEeecCCcEEEEeeeccCCC--CeEEEEeCCeeeCCCC
Q psy15206 52 KRLGRLHLAIPYT-------SPEAQV---DTPPVILNNSPQLSVAKEGQSVQLECHAEGHPI--PTISWRRENNAILPNG 119 (232)
Q Consensus 52 ~~~~~~~~~~~~~-------~~~l~v---~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~~~~~~~~~~ 119 (232)
.+.|.|.|..... ...|.| ..+|.+.. .+.......|+.+.|.|.+.+.++ +.+.|+++|..+....
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~-~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 159 (213)
T 3r06_A 81 EDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSI-FPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGV 159 (213)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEE-ECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred ccCEEEEEecccCCceEEcCCceEEEeccCCCceeee-eCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCce
Confidence 0113555554211 334555 33444432 222233446778999999988554 3799999998775421
Q ss_pred -c----------EEeeCCeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 120 -Q----------TIFTGSTLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 120 -~----------~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
. .....+.|.|.....+|.|.|+|.+.|...
T Consensus 160 ~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~ 201 (213)
T 3r06_A 160 LQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTS 201 (213)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred EeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEeccc
Confidence 0 011123577888888899999999999653
No 301
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.62 E-value=8.1e-13 Score=93.10 Aligned_cols=212 Identities=15% Similarity=0.231 Sum_probs=130.8
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecC-CC---CCeEEEEeCcEee-----------------eeEEEEeeee------
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEG-HP---IPTISWRRNFKRL-----------------GRLHLAIPYT------ 64 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~-~p---~~~~~W~~~~~~~-----------------~~~~~~~~~~------ 64 (232)
.+.+... |+...+..|+.++|.|.+.+ .| +..|+|+|++..+ |.|+|.+...
T Consensus 2 ~~tVs~~-P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGaT~tLti~s~t~sdSG~YqCvVTDa~Gcs~t 80 (304)
T 3shs_A 2 AFTVSIQ-SNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTATLTVADATSENAGSYKVTVQDTDTMTSV 80 (304)
T ss_dssp CEEEEEE-ESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEEETTTCCEE
T ss_pred ccEEEeC-CCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCCcceEEeeeccccCCeEEEEEEEECCCCeee
Confidence 3455555 77888999999999999874 56 6789999976332 4677765322
Q ss_pred --cCceeecCCcEEecCCCCceEeecCCcEEEEeee--cc-CC-----CCeEEEEeCCeeeCCCCcEEeeCCeEEECCCC
Q psy15206 65 --SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHA--EG-HP-----IPTISWRRENNAILPNGQTIFTGSTLQIPRIT 134 (232)
Q Consensus 65 --~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~--~~-~~-----~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~ 134 (232)
.+.+.....+......+.......+..+.|.+.+ .| .+ ..+++|++++..+.. ...|.+....
T Consensus 81 Ss~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg-------Aq~lT~sS~T 153 (304)
T 3shs_A 81 ESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT-------TQDITIQEFT 153 (304)
T ss_dssp ECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES-------SSEEEECSCC
T ss_pred eeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC-------ccccceeeEE
Confidence 2223322222332333555555567788888876 43 33 458999999876532 2356778888
Q ss_pred CCCCeEEEEEeEeCCC-CceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEe--------ecCCCC--eEEEe--eC
Q psy15206 135 KEDRGAYYCVAQNGIG-RGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHI--------EAYPHP--ILYWA--KD 201 (232)
Q Consensus 135 ~~~~g~y~C~~~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~--------~~~p~~--~~~W~--~~ 201 (232)
..+.|.|.|.+.+..+ ...+..+.+.+...+.-........+..|+.+.|...+ .|.|.. .+.|+ |.
T Consensus 154 ateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (304)
T 3shs_A 154 ADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQRE 233 (304)
T ss_dssp GGGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEEEEEEECT
T ss_pred ecCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEEEEEEeec
Confidence 8999999999998754 44455555554433222222334467788888887653 245544 37787 34
Q ss_pred CEEe----cCC-----CeEEEE------EeccccCCceEEEEecC
Q psy15206 202 GEIV----VND-----EYHSIS------NFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 202 g~~~----~~~-----~~~~~~------~~~~~~~d~g~Y~C~~~ 231 (232)
|+.. ..+ ..|.+. ....+..|...++|.+-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 234 GQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp TCCSCEEEESSSEECGGGEEECTTSCEEESSCCGGGCEEEEEEEE
T ss_pred CccCchhhhhhhhhhhccceeCCCcceeecccccccchheeeHHH
Confidence 4321 110 123332 23456688899999863
No 302
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.61 E-value=1e-14 Score=105.08 Aligned_cols=146 Identities=17% Similarity=0.262 Sum_probs=93.8
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCc--E-------------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNF--K------------------------------------------- 52 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~--~------------------------------------------- 52 (232)
+.++.+.+|++|+|.|.+.+.+ .+.+.|+|.. .
T Consensus 8 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 87 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSL 87 (253)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCC
Confidence 6788899999999999998844 7789999821 0
Q ss_pred ---eeeeEEEEeee-------ecCceeecC---------------CcEEecCCCCceEeecCCcEEEEeeeccCCCC---
Q psy15206 53 ---RLGRLHLAIPY-------TSPEAQVDT---------------PPVILNNSPQLSVAKEGQSVQLECHAEGHPIP--- 104 (232)
Q Consensus 53 ---~~~~~~~~~~~-------~~~~l~v~~---------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--- 104 (232)
+.|.|.|.... ....|.|.. ++.+. ..+....+.+|+++.|.|.+.+.+.+
T Consensus 88 ~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~-~~p~~~~v~~G~~v~L~C~~~~~~~~~~~ 166 (253)
T 3uzq_A 88 TSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMT-QTPASLAVSLGQRATISCRASENVDRYGN 166 (253)
T ss_dssp CGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEE-EECSEEEECTTSCEEEEEEESSCCEETTE
T ss_pred CcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEE-CcCCeEEEeCCCCEEEEEEecCccccCCC
Confidence 00234443321 133455543 12222 23555778899999999999987776
Q ss_pred -eEEEEeCC--eeeC------------CCCcEEee----CCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEecc
Q psy15206 105 -TISWRREN--NAIL------------PNGQTIFT----GSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 105 -~~~W~~~~--~~~~------------~~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 165 (232)
.+.|+++. ..+. ...++... ..+|.|.+++.+|+|.|.|.+.+..+........|.|...+
T Consensus 167 ~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~ 246 (253)
T 3uzq_A 167 SFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRPL 246 (253)
T ss_dssp ECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC-
T ss_pred cEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCCC
Confidence 89999852 2110 01122111 23699999999999999999998654434445566666544
Q ss_pred E
Q psy15206 166 I 166 (232)
Q Consensus 166 ~ 166 (232)
.
T Consensus 247 ~ 247 (253)
T 3uzq_A 247 E 247 (253)
T ss_dssp -
T ss_pred C
Confidence 3
No 303
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.61 E-value=6.8e-17 Score=113.62 Aligned_cols=125 Identities=17% Similarity=0.240 Sum_probs=82.1
Q ss_pred CCCceEeecCCcEEEEeeeccCCC---CeEEEEeCCeeeCCC---------CcEEeeCCeEEECCCCCCCCeEEEEEeEe
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPI---PTISWRRENNAILPN---------GQTIFTGSTLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~---~~~~W~~~~~~~~~~---------~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+....+.+|+.+.|.|.+.+.++ +.+.| + +...... .........|.|.++..+|.|.|.|.+.+
T Consensus 10 ~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C~~~~ 87 (214)
T 1ow0_A 10 RPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAY 87 (214)
T ss_dssp CCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEEECC
T ss_pred CcChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEEEEec
Confidence 355556678999999999988654 68999 4 3332110 00001223577888888999999999998
Q ss_pred CCCCce-eeEEE-EEEEeccEEEeccc-eeeeeccCeEEEEEEeecC-CC-CeEEEeeCCEEec
Q psy15206 148 GIGRGA-RRKIE-VKVEFAPIVTVQST-RIGQALHHDMDLDCHIEAY-PH-PILYWAKDGEIVV 206 (232)
Q Consensus 148 ~~~~~~-~~~~~-l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~g~~~~ 206 (232)
..+... .+.+. +.+..+|.+.+.+. ...+..|+.+.|.|.+.|+ |. +.|.|+|||..+.
T Consensus 88 ~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 151 (214)
T 1ow0_A 88 PESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELP 151 (214)
T ss_dssp SSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECC
T ss_pred CCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECC
Confidence 755321 12221 12345777765443 2235578899999999986 43 3899999998764
No 304
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.61 E-value=2.6e-15 Score=106.48 Aligned_cols=130 Identities=19% Similarity=0.304 Sum_probs=88.7
Q ss_pred CCcceEeecCCeEEEEEEecCCCC-CeEEEEeCcEe-------------------------------e------------
Q psy15206 19 STQLSVAKEGQSVQLECHAEGHPI-PTISWRRNFKR-------------------------------L------------ 54 (232)
Q Consensus 19 ~~~~~~~~~G~~v~l~C~~~~~p~-~~~~W~~~~~~-------------------------------~------------ 54 (232)
.|.++.+.+|++++|.|.+.+.+. +.+.|++++.. .
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 367888999999999999999884 89999973211 0
Q ss_pred ----eeEEEEeeee-------cCceeecCCcE--EecCCCCceEeecCCcE-EEEeee-ccCCCCeEEEEeCCeeeCCCC
Q psy15206 55 ----GRLHLAIPYT-------SPEAQVDTPPV--ILNNSPQLSVAKEGQSV-QLECHA-EGHPIPTISWRRENNAILPNG 119 (232)
Q Consensus 55 ----~~~~~~~~~~-------~~~l~v~~~p~--~~~~~~~~~~~~~g~~~-~l~C~~-~~~~~~~~~W~~~~~~~~~~~ 119 (232)
|.|.|..... .+.|.|..+|. .+...+....+..|+.+ .|.|.+ .+.|.+.+.|++++..+....
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~ 165 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPV 165 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCS
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcccc
Confidence 2455543211 44566655432 11223334445578887 999999 889999999999998875443
Q ss_pred ----cEEee-------------CCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 120 ----QTIFT-------------GSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 120 ----~~~~~-------------~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
+.... .+.|.|.....+|.|.|+|.+.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 166 EMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp SCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred ccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 22111 145777766666799999999985
No 305
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.61 E-value=1.2e-14 Score=104.97 Aligned_cols=154 Identities=19% Similarity=0.298 Sum_probs=95.1
Q ss_pred cCCCeeecCCCcceEeecCCeEEEEEEecCC--CCCeEEEEeCc-------E----------------------------
Q psy15206 10 DTPPVILNNSTQLSVAKEGQSVQLECHAEGH--PIPTISWRRNF-------K---------------------------- 52 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~--p~~~~~W~~~~-------~---------------------------- 52 (232)
..+|.+.+.++.++.+.+|++|+|.|.+.+. +.+.+.|+|.. .
T Consensus 5 ~~~~~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 84 (257)
T 3gkz_A 5 DDDKEVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKN 84 (257)
T ss_dssp ----CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGT
T ss_pred CCCccEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCc
Confidence 3445555554778889999999999999873 47899999821 0
Q ss_pred ------------eeeeEEEEeeee----------cCceeecCC-------------cEEecCCCCceEeecCCcEEEEee
Q psy15206 53 ------------RLGRLHLAIPYT----------SPEAQVDTP-------------PVILNNSPQLSVAKEGQSVQLECH 97 (232)
Q Consensus 53 ------------~~~~~~~~~~~~----------~~~l~v~~~-------------p~~~~~~~~~~~~~~g~~~~l~C~ 97 (232)
+.|.|.|..... ...|.|..+ +..+...+....+.+|+++.|.|.
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 164 (257)
T 3gkz_A 85 QVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCS 164 (257)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEE
T ss_pred eEEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEE
Confidence 113455544221 234555443 122223455677889999999999
Q ss_pred eccCCCC-eEEEEeC--CeeeC------------CCCcEEe----eCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 98 AEGHPIP-TISWRRE--NNAIL------------PNGQTIF----TGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 98 ~~~~~~~-~~~W~~~--~~~~~------------~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
+.+.+.+ .+.|++. +..+. ...++.. ...+|.|.++..+|+|.|.|.+.+...........
T Consensus 165 ~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~ 244 (257)
T 3gkz_A 165 ASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTK 244 (257)
T ss_dssp ESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEE
T ss_pred EccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEE
Confidence 9987777 8999984 22211 0112211 12359999999999999999998753322223344
Q ss_pred EEEEe
Q psy15206 159 VKVEF 163 (232)
Q Consensus 159 l~v~~ 163 (232)
|.|..
T Consensus 245 l~v~~ 249 (257)
T 3gkz_A 245 LEIKR 249 (257)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 55543
No 306
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.61 E-value=1.4e-14 Score=101.60 Aligned_cols=124 Identities=19% Similarity=0.260 Sum_probs=86.2
Q ss_pred CcceEeecCCeEEEEEEecCC-------CCCeEEEEeCcEe---------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGH-------PIPTISWRRNFKR--------------------------------------- 53 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~-------p~~~~~W~~~~~~--------------------------------------- 53 (232)
|.++.+.+|++++|.|.+.+. +.+.+.|+|++..
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 678889999999999999854 5778999985321
Q ss_pred -------eeeEEEEeeee----------cCceeecCC---cEEecCCCCceEeecCCcEEEEeeeccC----CCCeEEEE
Q psy15206 54 -------LGRLHLAIPYT----------SPEAQVDTP---PVILNNSPQLSVAKEGQSVQLECHAEGH----PIPTISWR 109 (232)
Q Consensus 54 -------~~~~~~~~~~~----------~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~~~~W~ 109 (232)
.|.|.|..... .+.|.|..+ |.+.. +. .+.+|+.+.|.|.+.+. |.+.+.|+
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~--~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~ 162 (214)
T 2zg1_A 87 GDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF--LE--PLESGRPTRLSCSLPGSCEAGPPLTFSWT 162 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC----C--CCCTTCCEEEEEECTTCCSCSSCCEEEEE
T ss_pred ccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec--Cc--cccCCCeEEEEEEeccCCCCCCCceEEEe
Confidence 03555554211 334555442 22221 11 25689999999999764 77899999
Q ss_pred eCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 110 RENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
+++....... ....+.|.|..+..+|.|.|+|.+.|..
T Consensus 163 ~~~~~~~~~~--~~~~~~L~i~~~~~~~~g~Y~C~a~n~~ 200 (214)
T 2zg1_A 163 GNALSPLDPE--TTRSSELTLTPRPEDHGTNLTCQMKRQG 200 (214)
T ss_dssp SSTTSSSCSS--CCCSSEEEECCCTTCCSCEEEEEEECC-
T ss_pred CCCCccCCCC--ceeEEEEEEecccHHcCcEEEEEEEeCC
Confidence 9986543221 2346789999999999999999999964
No 307
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.60 E-value=1.2e-14 Score=101.75 Aligned_cols=130 Identities=12% Similarity=0.257 Sum_probs=86.8
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEeCc--Ee---------------------------------------eeeEE
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRRNF--KR---------------------------------------LGRLH 58 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~--~~---------------------------------------~~~~~ 58 (232)
|.++.+.+|++++|.|.+.+.|.+.+.|+++. .. .|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 67788999999999999999888899999831 00 02444
Q ss_pred EEeeee-------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeCCeeeCCC-Cc-----
Q psy15206 59 LAIPYT-------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRENNAILPN-GQ----- 120 (232)
Q Consensus 59 ~~~~~~-------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~~~~~~-~~----- 120 (232)
|..... ...|.|.. +|.+....+.. ....|+.+.|.|.+.| .|.+ .+.|+++|..+... ..
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 165 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPST-EQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQ 165 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCH-HHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCch-hhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCc
Confidence 443211 22455543 34333212222 2336889999999987 4443 79999999876543 00
Q ss_pred -----EEeeCCeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 121 -----TIFTGSTLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 121 -----~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
.....+.|.|.++..+|.|.|+|.+.|...
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 166 DSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTS 200 (210)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred cCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCC
Confidence 011123689999999999999999998654
No 308
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.60 E-value=2.1e-14 Score=103.09 Aligned_cols=150 Identities=22% Similarity=0.341 Sum_probs=91.0
Q ss_pred CCceEeecCCcEEEEeeeccC--CCCeEEEEeCC--ee---e---C-----------CCCcEEee------CCeEEECCC
Q psy15206 81 PQLSVAKEGQSVQLECHAEGH--PIPTISWRREN--NA---I---L-----------PNGQTIFT------GSTLQIPRI 133 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~---~---~-----------~~~~~~~~------~~~l~i~~~ 133 (232)
+....+.+|+++.|.|...+. ....+.|++.. .. + . ...++... ..+|.|.++
T Consensus 6 ~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 85 (248)
T 3u2s_H 6 SGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSL 85 (248)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 344677889999999998752 34579998742 11 0 0 01222221 125999999
Q ss_pred CCCCCeEEEEEeEeCC---------------------CCceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEe
Q psy15206 134 TKEDRGAYYCVAQNGI---------------------GRGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHI 188 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~---------------------~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~ 188 (232)
+.+|+|.|.|.+.+.. .........+.|. .+|.+...+.......|+.+.|.|.+
T Consensus 86 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~ 165 (248)
T 3u2s_H 86 RVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 165 (248)
T ss_dssp CGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEEEEE
T ss_pred CHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEEEE
Confidence 9999999999998631 0011123345554 45666644444445579999999999
Q ss_pred ecC-C-CCeEEEeeCCEEe---------cCCCeEE----EEEeccccCCceEEEEecC
Q psy15206 189 EAY-P-HPILYWAKDGEIV---------VNDEYHS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 189 ~~~-p-~~~~~W~~~g~~~---------~~~~~~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
.++ | ...+.|+++|..+ ..++.|. +.+......| |.|+|.|.
T Consensus 166 ~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~ 222 (248)
T 3u2s_H 166 KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 222 (248)
T ss_dssp EEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEE
T ss_pred eeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEE
Confidence 874 4 3469999988521 1233343 3344445567 99999874
No 309
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.60 E-value=1.4e-14 Score=103.53 Aligned_cols=149 Identities=19% Similarity=0.319 Sum_probs=93.3
Q ss_pred CceEeecCCcEEEEeeeccCC----CCeEEEEeCCe--e---e---C----------------CCCcEEee------CCe
Q psy15206 82 QLSVAKEGQSVQLECHAEGHP----IPTISWRRENN--A---I---L----------------PNGQTIFT------GST 127 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~----~~~~~W~~~~~--~---~---~----------------~~~~~~~~------~~~ 127 (232)
....+.+|+++.|.|.+.+.+ ...+.|++... . + . ...++... ..+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 87 (239)
T 3tv3_H 8 GPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVF 87 (239)
T ss_dssp SCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEE
T ss_pred CCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEE
Confidence 345677899999999997754 34799998421 1 0 0 01122211 125
Q ss_pred EEECCCCCCCCeEEEEEeEeCCC------------CceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecC
Q psy15206 128 LQIPRITKEDRGAYYCVAQNGIG------------RGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAY 191 (232)
Q Consensus 128 l~i~~~~~~~~g~y~C~~~~~~~------------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 191 (232)
|.|.+++.+|+|.|.|.+.+..+ ........+.|. .+|.+...+....+..|+.+.|.|.+.++
T Consensus 88 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~ 167 (239)
T 3tv3_H 88 LKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY 167 (239)
T ss_dssp EEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEEE
T ss_pred EEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEeeE
Confidence 99999999999999999976421 001122344443 35666644444445679999999999884
Q ss_pred -CCC-eEEEeeCCEEe---------cCCCeEE----EEEeccccCCceEEEEecC
Q psy15206 192 -PHP-ILYWAKDGEIV---------VNDEYHS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 192 -p~~-~~~W~~~g~~~---------~~~~~~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
|.+ .+.|+++|..+ ..+..|. +.+......| |.|+|.|.
T Consensus 168 ~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~ 221 (239)
T 3tv3_H 168 FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 221 (239)
T ss_dssp BSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEE
T ss_pred eCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEE
Confidence 434 48899988532 1233343 4455556677 99999974
No 310
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.60 E-value=1.4e-14 Score=99.55 Aligned_cols=123 Identities=24% Similarity=0.388 Sum_probs=81.2
Q ss_pred cceEeecCCeEEEEEEecCCCCCeEEEEeCcEee-------------------eeEEEEeeee--------cCceeecCC
Q psy15206 21 QLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL-------------------GRLHLAIPYT--------SPEAQVDTP 73 (232)
Q Consensus 21 ~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~-------------------~~~~~~~~~~--------~~~l~v~~~ 73 (232)
.-.++.+|++++|.|.+.+ ++ .+.|+|++..+ |.|+|..... .+.+.+..+
T Consensus 7 ~~~v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~ 84 (186)
T 1jbj_A 7 EYKVSISGTSVELTCPLDS-DE-NLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADD 84 (186)
T ss_dssp CCEEEEETTEEEEECSSCC-CT-TCEEEETTEEECSCCCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCC
T ss_pred EEEEEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCCCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecccc
Confidence 3445678999999999987 43 49999965433 3466644221 111111111
Q ss_pred cEEe-------------------cCCCCc---eEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEEC
Q psy15206 74 PVIL-------------------NNSPQL---SVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIP 131 (232)
Q Consensus 74 p~~~-------------------~~~~~~---~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~ 131 (232)
+... ...... ..+.+|+.+.|.|.+ |.+.+.|+++|..+..... ..+.|.|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~---~~~~L~i~ 158 (186)
T 1jbj_A 85 AKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA---TKNTWNLG 158 (186)
T ss_dssp CCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC---CSSCCEEE
T ss_pred cccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC---CcceEEEC
Confidence 1100 000001 123389999999988 7789999999988753322 45679999
Q ss_pred CCCCCCCeEEEEEeEeCCCC
Q psy15206 132 RITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 132 ~~~~~~~g~y~C~~~~~~~~ 151 (232)
++..+|.|.|+|.+.|..|.
T Consensus 159 ~v~~~D~G~Y~C~a~N~~g~ 178 (186)
T 1jbj_A 159 NNAKDPRGTYQCQGAKETSN 178 (186)
T ss_dssp ETTSCCEEEEEEEESSCEEE
T ss_pred CCCcCcCEEEEEEEEcCcCC
Confidence 99999999999999987654
No 311
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.60 E-value=1e-14 Score=103.70 Aligned_cols=147 Identities=19% Similarity=0.290 Sum_probs=88.9
Q ss_pred eEeecCCcEEEEeeeccCC--CCeE--EEEeCCe--e---e-----C-----------CCCcEEee------CCeEEECC
Q psy15206 84 SVAKEGQSVQLECHAEGHP--IPTI--SWRRENN--A---I-----L-----------PNGQTIFT------GSTLQIPR 132 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~--~~~~--~W~~~~~--~---~-----~-----------~~~~~~~~------~~~l~i~~ 132 (232)
..+.+|+++.|.|...+.+ ...+ .|++... . + . ...++... ..+|.|.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 89 (232)
T 3qhz_H 10 ALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTN 89 (232)
T ss_dssp SEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECS
T ss_pred EEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECc
Confidence 4677899999999986532 2345 9997421 1 0 0 01122221 12599999
Q ss_pred CCCCCCeEEEEEeEeCCC-------CceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecCCCC--eEEEe
Q psy15206 133 ITKEDRGAYYCVAQNGIG-------RGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHP--ILYWA 199 (232)
Q Consensus 133 ~~~~~~g~y~C~~~~~~~-------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~ 199 (232)
++.+|+|.|.|.+.+..+ ........+.|. .+|.+...+....+..|+.++|.|.+.+.+++ .+.|+
T Consensus 90 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~ 169 (232)
T 3qhz_H 90 MDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN 169 (232)
T ss_dssp CCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEEEEG
T ss_pred CChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEEEE
Confidence 999999999999986521 112233345554 45666644444455679999999999885543 58899
Q ss_pred eCCEEe---------cCCCeE----EEEEeccccCCceEEEEecC
Q psy15206 200 KDGEIV---------VNDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 200 ~~g~~~---------~~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
++|..+ ..++.| .+.+......| |.|+|.|.
T Consensus 170 ~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~ 213 (232)
T 3qhz_H 170 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 213 (232)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEE
T ss_pred ECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEE
Confidence 988521 223333 34455556677 99999874
No 312
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.60 E-value=8.2e-15 Score=103.08 Aligned_cols=136 Identities=16% Similarity=0.256 Sum_probs=89.2
Q ss_pred CeeecCCCcceEeecCCeEEEEEEecCC-CCCeEEEEeCc----------------------------------------
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECHAEGH-PIPTISWRRNF---------------------------------------- 51 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~~~~~-p~~~~~W~~~~---------------------------------------- 51 (232)
|.++.. + ++.+.+|++++|.|.+.+. +.+.+.|+|+.
T Consensus 2 ~~v~~~-p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 79 (218)
T 3s96_B 2 LVLTQS-S-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSI 79 (218)
T ss_dssp CSEECC-S-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEE
T ss_pred CeEEeC-C-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEE
Confidence 445544 5 8889999999999999998 88999999821
Q ss_pred -----EeeeeEEEEeeee-----------cCceeec----CCcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEE
Q psy15206 52 -----KRLGRLHLAIPYT-----------SPEAQVD----TPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWR 109 (232)
Q Consensus 52 -----~~~~~~~~~~~~~-----------~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~ 109 (232)
.+.|.|.|..... ...|.|. .+|.+... +.......|+.+.|.|.+.+ .|.+ .+.|+
T Consensus 80 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~-~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~ 158 (218)
T 3s96_B 80 SNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVF-PPSSEELKENKATLVCLISNFSPSGVTVAWK 158 (218)
T ss_dssp SSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEE-CCCHHHHHTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred ccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEee-CCCcccccCCcEEEEEEECcccCCCeEEEEE
Confidence 0114566655221 2355555 33443321 22223345788999999988 5666 79999
Q ss_pred eCCeeeCCCCc---------EEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 110 RENNAILPNGQ---------TIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 110 ~~~~~~~~~~~---------~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
++|..+..... .....+.|.|.....+|.|.|+|.+.|..+.
T Consensus 159 k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~ 209 (218)
T 3s96_B 159 ANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDT 209 (218)
T ss_dssp ETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEE
T ss_pred ECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCc
Confidence 99987643111 0111234778888888899999999997543
No 313
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.59 E-value=3.8e-14 Score=102.25 Aligned_cols=143 Identities=20% Similarity=0.288 Sum_probs=91.8
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCc--E-------------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNF--K------------------------------------------- 52 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~--~------------------------------------------- 52 (232)
++++.+.+|++|+|.|.+.+.+ .+.+.|+|.. .
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 4567799999999999998865 6789998721 0
Q ss_pred ---eeeeEEEEeeee----------cCceeecC----------------CcEEecCCCCceEeecCCcEEEEeeeccCCC
Q psy15206 53 ---RLGRLHLAIPYT----------SPEAQVDT----------------PPVILNNSPQLSVAKEGQSVQLECHAEGHPI 103 (232)
Q Consensus 53 ---~~~~~~~~~~~~----------~~~l~v~~----------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~ 103 (232)
+.|.|.|..... ...|.|.. ++.+. ..+....+.+|+++.|.|.+.+.+.
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~v~~G~~v~L~C~~~~~~~ 167 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLT-QSPSSLSASLGERVSITCRASQDIG 167 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEE-EECSEEEECTTCCEEEEEEESSCCT
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEE-cCCCeEEEECCCCEEEEEEEecCCC
Confidence 012444443111 23455543 22222 2345567889999999999999888
Q ss_pred CeEEEEeCC--eeeC------------CCCcEEe----eCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEe
Q psy15206 104 PTISWRREN--NAIL------------PNGQTIF----TGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEF 163 (232)
Q Consensus 104 ~~~~W~~~~--~~~~------------~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 163 (232)
+.+.|++.. ..+. ...++.. ...+|.|.++..+|+|.|+|.+.+...........|.|..
T Consensus 168 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~ 245 (256)
T 3umt_A 168 SNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKR 245 (256)
T ss_dssp TCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC-
T ss_pred cEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEEC
Confidence 899999842 2111 0122211 1235999999999999999999875433233445565554
No 314
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.58 E-value=7e-15 Score=105.96 Aligned_cols=141 Identities=14% Similarity=0.205 Sum_probs=91.0
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCC-----CCeEEEEeCc--E-----------------------------
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHP-----IPTISWRRNF--K----------------------------- 52 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p-----~~~~~W~~~~--~----------------------------- 52 (232)
+..+|.+... +.++.+.+|++++|.|.+.+.+ .+.+.|+|+. .
T Consensus 35 ~~~~~~~~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 113 (254)
T 2c1o_A 35 WLRELVMTQS-PLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDF 113 (254)
T ss_dssp ---CCCEEEE-CSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEE
T ss_pred eeeceeEEeC-CceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEE
Confidence 3346777766 7789999999999999999877 4899999732 0
Q ss_pred ----------eeeeEEEEeeee-------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccC-CC-CeEEEEe
Q psy15206 53 ----------RLGRLHLAIPYT-------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGH-PI-PTISWRR 110 (232)
Q Consensus 53 ----------~~~~~~~~~~~~-------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~ 110 (232)
+.|.|.|..... ...+.|.. +|.+....+.. ....|+.+.|.|.+.+. |. +.+.|++
T Consensus 114 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k 192 (254)
T 2c1o_A 114 TLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKI 192 (254)
T ss_dssp EEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCCh-hhccCCcEEEEEEEecccCCCcEEEEEE
Confidence 002444443211 12444442 34333212221 22357799999999884 44 3599999
Q ss_pred CCeeeCCC-Cc----------EEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 111 ENNAILPN-GQ----------TIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 111 ~~~~~~~~-~~----------~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
+|..+... .. .....+.|.|.++..+|.|.|+|.+.|....
T Consensus 193 ~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 193 DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp SSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 99876543 00 1112347999999999999999999997543
No 315
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.58 E-value=2e-14 Score=102.32 Aligned_cols=138 Identities=16% Similarity=0.278 Sum_probs=91.3
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCc----------------------------------------
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNF---------------------------------------- 51 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~---------------------------------------- 51 (232)
.+.+... +.++.+.+|++++|.|.+.+.+.+.+.|+|+.
T Consensus 24 ~~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 102 (237)
T 3sob_L 24 DIQMTQS-PSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 102 (237)
T ss_dssp CCCEEEE-CSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred cceEEeC-CCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCC
Confidence 4556555 67789999999999999999888999999821
Q ss_pred -EeeeeEEEEeeee-------cCceeec---CCcEEecCCCCceEeecCCcEEEEeeecc-CC-CCeEEEEeCCeeeCCC
Q psy15206 52 -KRLGRLHLAIPYT-------SPEAQVD---TPPVILNNSPQLSVAKEGQSVQLECHAEG-HP-IPTISWRRENNAILPN 118 (232)
Q Consensus 52 -~~~~~~~~~~~~~-------~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~-~~~~~W~~~~~~~~~~ 118 (232)
.+.|.|.|..... ...|.|. .+|.+.. .+.......|+.+.|.|.+.+ .| .+.+.|++++..+...
T Consensus 103 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~-~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~ 181 (237)
T 3sob_L 103 PEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFI-FPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 181 (237)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEE-ECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred hhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEE-eCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCc
Confidence 0113555554221 2344442 2333322 111222335788999999988 44 4789999999876532
Q ss_pred C-----------cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 119 G-----------QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 119 ~-----------~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
. ......+.|.|.....+|.|.|+|.+.|....
T Consensus 182 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 225 (237)
T 3sob_L 182 SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 225 (237)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred eeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCC
Confidence 1 11112245888899999999999999997543
No 316
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.58 E-value=5e-14 Score=98.39 Aligned_cols=147 Identities=22% Similarity=0.330 Sum_probs=90.2
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCe--e--eC--------CCCcEEee-------CCeEEECCCCCCCCeE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENN--A--IL--------PNGQTIFT-------GSTLQIPRITKEDRGA 140 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~--~--~~--------~~~~~~~~-------~~~l~i~~~~~~~~g~ 140 (232)
.+....+.+|+++.|.|.+.+.. +.+.|++... . .. ...++... ..+|.|.+++.+|.|.
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~ 85 (207)
T 1ypz_E 7 SPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGT 85 (207)
T ss_dssp SCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEE
T ss_pred CCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEE
Confidence 35556788999999999987644 4799998531 1 10 11233222 1379999999999999
Q ss_pred EEEEeEeCCC---------C-ceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecC-CC-CeEEEeeCCEEec--
Q psy15206 141 YYCVAQNGIG---------R-GARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAY-PH-PILYWAKDGEIVV-- 206 (232)
Q Consensus 141 y~C~~~~~~~---------~-~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~g~~~~-- 206 (232)
|.|.+.+..+ . .......|.|...+.....| .+.+..+ .+.|.|.+.++ |. +.+.|+++ ..+.
T Consensus 86 Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P-~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~~~ 162 (207)
T 1ypz_E 86 YFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKP-SVFIMKN-GTNVACLVKDFYPKEVTISLRSS-KKIVEF 162 (207)
T ss_dssp EEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCC-EEEEEEE-TTEEEEEEEEESSSCCEEEEECS-SEEEEC
T ss_pred EEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCC-eEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-CcccCC
Confidence 9999987532 1 01123466665311100011 1111122 37999999876 43 68999998 5443
Q ss_pred -------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 207 -------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 207 -------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.++.|.+.. .....|.|.|+|.|.
T Consensus 163 ~~~~~~~~~g~y~~~~-~~~~~~~~~ytC~v~ 193 (207)
T 1ypz_E 163 DPAIVISPSGKYSAVK-LGQYGDSNSVTCSVQ 193 (207)
T ss_dssp CCEEEECTTSSEEEEE-CEEESSTTTCEEEEE
T ss_pred ccceEEcCCCcEEEEE-eecccCCCcEEEEEE
Confidence 234555542 233367899999974
No 317
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.58 E-value=2.3e-13 Score=92.31 Aligned_cols=144 Identities=13% Similarity=0.220 Sum_probs=96.4
Q ss_pred CCceEeecCCcEEEEeeeccCCCCe-EEEEeCC-eeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPT-ISWRREN-NAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~-~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
+....+..|+++.|.|.... +.+. +.|...- +......+ .....|.|.++.. .|.|.|.+.... ....+.+.
T Consensus 6 P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~~--~~~~~l~l~~vs~--~g~y~C~~~c~~-~~~~~~~~ 79 (185)
T 1iam_A 6 PSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPG--NNRKVYELSNVQE--DSQPMCYSNCPD-GQSTAKTF 79 (185)
T ss_dssp SSEEEEETTEEEEEEEEECS-SSCSEEEEECSSCEEEECSSS--SSEEEEEEEEECS--CBCCEEEEECSS-CEEEEECE
T ss_pred CCCcEEeCCCCEEEEEEccC-CCCccceEEeeCCCccEeccC--CceeEEEEEecCc--CCEEEEEEECCC-CceEEEEE
Confidence 45567889999999999964 4444 7786321 11110000 0113578888873 389999986543 34677888
Q ss_pred EEEEeccE-EEeccceeeeeccCeEEEEEEeec-CCCC--eEEEeeCCEEecC------CCeEEEEEeccccCCce-EEE
Q psy15206 159 VKVEFAPI-VTVQSTRIGQALHHDMDLDCHIEA-YPHP--ILYWAKDGEIVVN------DEYHSISNFGTSEGTTG-SLQ 227 (232)
Q Consensus 159 l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~-~p~~--~~~W~~~g~~~~~------~~~~~~~~~~~~~~d~g-~Y~ 227 (232)
+.|+.+|. +.+.+....+.+|+.++|.|.+.| .|.+ .|.|+|++..+.. .....+... .+.+|.| .|+
T Consensus 80 l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~~~~~~~tl~~~-~~reD~g~~~s 158 (185)
T 1iam_A 80 LTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEVTTTVL-VRRDHHGAQFS 158 (185)
T ss_dssp EEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEE-CCSSCSSCEEE
T ss_pred EEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCCCccccEEEEEe-ceeccCCCeEE
Confidence 88887664 556666556889999999999988 4544 4899999987753 223344444 3445556 999
Q ss_pred EecC
Q psy15206 228 CKVP 231 (232)
Q Consensus 228 C~~~ 231 (232)
|+|.
T Consensus 159 C~A~ 162 (185)
T 1iam_A 159 CRTE 162 (185)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 318
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.57 E-value=5.6e-14 Score=101.37 Aligned_cols=139 Identities=22% Similarity=0.303 Sum_probs=89.6
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecC--CCCCeEEEEeCc--E----------------------------------
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEG--HPIPTISWRRNF--K---------------------------------- 52 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~--~p~~~~~W~~~~--~---------------------------------- 52 (232)
.+|.+... +..+.+.+|++|+|.|.+.+ .+.+.+.|+|.. .
T Consensus 5 ~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 83 (256)
T 3juy_B 5 HHQVQLVQ-SGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSAN 83 (256)
T ss_dssp --CCEEEE-CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTT
T ss_pred cceEEEEe-cCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCC
Confidence 34555555 88999999999999999987 367789999721 0
Q ss_pred ------------eeeeEEEEeeee------------------cCceeecCCcE--------------EecCCCCceEeec
Q psy15206 53 ------------RLGRLHLAIPYT------------------SPEAQVDTPPV--------------ILNNSPQLSVAKE 88 (232)
Q Consensus 53 ------------~~~~~~~~~~~~------------------~~~l~v~~~p~--------------~~~~~~~~~~~~~ 88 (232)
+.|.|.|..... ...|.|...+. .+...+....+.+
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 163 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSP 163 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECT
T ss_pred EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeC
Confidence 012444443211 22344544211 1122355667889
Q ss_pred CCcEEEEeeeccCCC-CeEEEEeC--CeeeC------------CCCcEEe----eCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 89 GQSVQLECHAEGHPI-PTISWRRE--NNAIL------------PNGQTIF----TGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 89 g~~~~l~C~~~~~~~-~~~~W~~~--~~~~~------------~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
|+++.|.|.+.+.+. +.+.|++. +..+. ...++.. ...+|.|.++..+|+|.|.|.+.+..
T Consensus 164 G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 243 (256)
T 3juy_B 164 GERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGAS 243 (256)
T ss_dssp TSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSS
T ss_pred CCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCC
Confidence 999999999988775 78999983 22211 1122221 12359999999999999999998754
Q ss_pred C
Q psy15206 150 G 150 (232)
Q Consensus 150 ~ 150 (232)
.
T Consensus 244 ~ 244 (256)
T 3juy_B 244 S 244 (256)
T ss_dssp C
T ss_pred C
Confidence 3
No 319
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.57 E-value=6.9e-14 Score=88.16 Aligned_cols=93 Identities=24% Similarity=0.358 Sum_probs=75.2
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee----CCeEEECCCCCCCCeEEEEEeEe
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT----GSTLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....+.... ...|.|.++..+|.|.|+|.+.|
T Consensus 6 ~pp~i~~-~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 6 SGPQIIQ-FPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCEESC-CCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCEEEe-CCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 3455543 667778899999999999999999999999999887655555443 45799999999999999999999
Q ss_pred CCCCceeeEEEEEEEeccE
Q psy15206 148 GIGRGARRKIEVKVEFAPI 166 (232)
Q Consensus 148 ~~~~~~~~~~~l~v~~~p~ 166 (232)
..|. ....+.+.|...|.
T Consensus 85 ~~g~-~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 85 KLGS-RQAQVNLTVVDKPD 102 (114)
T ss_dssp SSCE-EECCEEEEEECSCS
T ss_pred CCCc-EEEEEEEEEECCCC
Confidence 8886 55677888876654
No 320
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.57 E-value=4e-14 Score=102.13 Aligned_cols=135 Identities=17% Similarity=0.334 Sum_probs=90.0
Q ss_pred CeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCc-----------------------------------------
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNF----------------------------------------- 51 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~----------------------------------------- 51 (232)
..|+.. +.++.+.+|++++|.|.+.+.+.+.+.|+|..
T Consensus 4 ~~v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~ 82 (256)
T 3tf7_C 4 QSVTQP-DARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKAS 82 (256)
T ss_dssp CEEECS-CSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESS
T ss_pred cEEEec-CceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECC
Confidence 345555 77889999999999999998899999999821
Q ss_pred ---EeeeeEEEEeeee----------cCceeecC--------------------CcEEecCCCCceEeecCCcEEEEeee
Q psy15206 52 ---KRLGRLHLAIPYT----------SPEAQVDT--------------------PPVILNNSPQLSVAKEGQSVQLECHA 98 (232)
Q Consensus 52 ---~~~~~~~~~~~~~----------~~~l~v~~--------------------~p~~~~~~~~~~~~~~g~~~~l~C~~ 98 (232)
.+.|.|.|..... ...|.|.. ++.+. ..+....+.+|+++.|.|.+
T Consensus 83 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~p~~~~v~~G~~v~L~C~~ 161 (256)
T 3tf7_C 83 VHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVT-QSPRNKVTVTGENVTLSCRQ 161 (256)
T ss_dssp CCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEE-ESCSEEEEETTCCEEECEEE
T ss_pred CCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEE-ecCCEEEEeCCCcEEEEEEc
Confidence 0012455544211 23455543 22222 24556677799999999999
Q ss_pred ccCCCCeEEEEeCCe--ee---C------------CCCcEEe-----eCCeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 99 EGHPIPTISWRRENN--AI---L------------PNGQTIF-----TGSTLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 99 ~~~~~~~~~W~~~~~--~~---~------------~~~~~~~-----~~~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
.+. .+.+.|++... .+ . ...++.. ....|.|.++..+|+|.|+|.+.+..+
T Consensus 162 ~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g 234 (256)
T 3tf7_C 162 TNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPG 234 (256)
T ss_dssp CSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETT
T ss_pred CCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCC
Confidence 876 67899998431 11 0 0111111 123799999999999999999988654
No 321
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.57 E-value=1.6e-14 Score=89.83 Aligned_cols=69 Identities=17% Similarity=0.358 Sum_probs=59.7
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+.+..+..|+++.|.|.+.|.|.|.|.|+|||..+..+.+ ..|.+.++...|+|.|+|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 89 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEE
Confidence 467888888888999999999999999999999999999998875543 467778888899999999873
No 322
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.57 E-value=3.8e-14 Score=101.45 Aligned_cols=133 Identities=20% Similarity=0.282 Sum_probs=86.4
Q ss_pred eeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcE-----------------------------------------
Q psy15206 14 VILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK----------------------------------------- 52 (232)
Q Consensus 14 ~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~----------------------------------------- 52 (232)
.|+.. |.++.+.+|++++|.|.+.+.+.+.+.|+|+..
T Consensus 3 ~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (242)
T 2znx_A 3 VLTQS-PATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETE 81 (242)
T ss_dssp CEEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred cEEEc-CCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChH
Confidence 34444 778889999999999999998888999998310
Q ss_pred eeeeEEEEeeee-------cCceeecCCcE-------------EecCCCCceEeecCCcEEEEeeeccCC--CCeEEEEe
Q psy15206 53 RLGRLHLAIPYT-------SPEAQVDTPPV-------------ILNNSPQLSVAKEGQSVQLECHAEGHP--IPTISWRR 110 (232)
Q Consensus 53 ~~~~~~~~~~~~-------~~~l~v~~~p~-------------~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~ 110 (232)
+.|.|.|..... ...|.|..++. .+. .+....+.+|+++.|.|.+.+.+ .+.+.|++
T Consensus 82 D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k 160 (242)
T 2znx_A 82 DFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQ-ESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIR 160 (242)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEE-EECCSEECTTSCEEEEEEEESSCGGGSCEEEEE
T ss_pred HCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeee-cCCcceecCCCeEEEEEEEEccccCCcceeeEe
Confidence 012344433111 23456655432 111 12224577899999999998865 46799998
Q ss_pred CC--eeeC----------------CCCcEEee------CCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 111 EN--NAIL----------------PNGQTIFT------GSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 111 ~~--~~~~----------------~~~~~~~~------~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
+. ..+. ...++... ..+|.|.+++.+|+|.|.|.+.+.
T Consensus 161 ~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 161 KFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp ECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred eCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 53 2210 12223221 137999999999999999999873
No 323
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.56 E-value=1.5e-14 Score=104.44 Aligned_cols=69 Identities=26% Similarity=0.360 Sum_probs=51.3
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEe--CCeeeC------------CCCcEEe----eCCeEEECCCCCCCCeEEE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRR--ENNAIL------------PNGQTIF----TGSTLQIPRITKEDRGAYY 142 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~--~~~~~~------------~~~~~~~----~~~~l~i~~~~~~~~g~y~ 142 (232)
+....+.+|+++.|.|.+.+.+.+.+.|++ ++..+. ...++.. ....|.|.++..+|+|.|+
T Consensus 146 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 225 (257)
T 1f3r_B 146 PSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYF 225 (257)
T ss_dssp TSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEE
T ss_pred CCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEE
Confidence 344567789999999999988888999999 444321 0122221 1237999999999999999
Q ss_pred EEeEeCC
Q psy15206 143 CVAQNGI 149 (232)
Q Consensus 143 C~~~~~~ 149 (232)
|.+.|..
T Consensus 226 C~a~n~~ 232 (257)
T 1f3r_B 226 CYQYNNG 232 (257)
T ss_dssp EEEESSS
T ss_pred EEEeCCC
Confidence 9999853
No 324
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.56 E-value=2.4e-14 Score=102.66 Aligned_cols=135 Identities=19% Similarity=0.243 Sum_probs=88.8
Q ss_pred eecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeC----------------cE--------------------------
Q psy15206 15 ILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRN----------------FK-------------------------- 52 (232)
Q Consensus 15 i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~----------------~~-------------------------- 52 (232)
++.. +..+.+.+|++++|.|.+.+.+.+.+.|+|. +.
T Consensus 4 v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 4 VSQH-PSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp EEEE-CSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred cEEC-CcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 4444 6778899999999999999989999999981 10
Q ss_pred -----eeeeEEEEeee----------ecCceeecC------CcEEecCCCCceEeecCCcEEEEeeeccCCCC--eEEEE
Q psy15206 53 -----RLGRLHLAIPY----------TSPEAQVDT------PPVILNNSPQLSVAKEGQSVQLECHAEGHPIP--TISWR 109 (232)
Q Consensus 53 -----~~~~~~~~~~~----------~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~~~W~ 109 (232)
+.|.|.|.... ....|.|.. +|.+....+....+..|+.+.|.|.+.+.+++ .+.|+
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 162 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 162 (246)
T ss_dssp SCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEE
Confidence 01345554421 122444432 33333223333334458999999999886554 79999
Q ss_pred eCCeeeCCCCcE---------------EeeCCeEEECCCCCCC-CeEEEEEeEeCCC
Q psy15206 110 RENNAILPNGQT---------------IFTGSTLQIPRITKED-RGAYYCVAQNGIG 150 (232)
Q Consensus 110 ~~~~~~~~~~~~---------------~~~~~~l~i~~~~~~~-~g~y~C~~~~~~~ 150 (232)
++|..+...... ....+.|.|.....+| .|.|+|.+.|...
T Consensus 163 k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~ 219 (246)
T 4dzb_B 163 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 219 (246)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCC
Confidence 999877542111 1112347788888788 8999999998643
No 325
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.56 E-value=3.9e-14 Score=87.01 Aligned_cols=88 Identities=24% Similarity=0.438 Sum_probs=69.1
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC--cEEee----CCeEEECCCCCCCCeEEEEEeE
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG--QTIFT----GSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~--~~~~~----~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
||.+. ..+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++... ..+|.|.++..+|.|.|+|.+.
T Consensus 5 PP~i~-~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 5 PPKIE-ALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEC-CCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEE-eCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 34443 45677888999999999999999999999999998875433 22221 2379999999999999999999
Q ss_pred eCCCCceeeEEEEEEE
Q psy15206 147 NGIGRGARRKIEVKVE 162 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~ 162 (232)
|..|. ....+.|.|.
T Consensus 84 N~~G~-~~~~~~l~V~ 98 (100)
T 3knb_A 84 NEFGS-DSATVNIHIR 98 (100)
T ss_dssp ETTEE-EEEEEEEEEE
T ss_pred ECCCE-EEEEEEEEEE
Confidence 98886 5566666664
No 326
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.56 E-value=1.8e-14 Score=100.83 Aligned_cols=127 Identities=14% Similarity=0.218 Sum_probs=85.6
Q ss_pred ceEeecCCeEEEEEEecCCCCCeEEEEeCc---E--------------------------------------eeeeEEEE
Q psy15206 22 LSVAKEGQSVQLECHAEGHPIPTISWRRNF---K--------------------------------------RLGRLHLA 60 (232)
Q Consensus 22 ~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~---~--------------------------------------~~~~~~~~ 60 (232)
++.+.+|++++|.|.+. +.+.+.|+|+. . +.|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 78899999999999998 88899999821 0 11355555
Q ss_pred eeee--------cCceeec----CCcEEecCCCCceEeecCCcEEEEeeeccCC--CCeEEEEeCCeeeCCCC-------
Q psy15206 61 IPYT--------SPEAQVD----TPPVILNNSPQLSVAKEGQSVQLECHAEGHP--IPTISWRRENNAILPNG------- 119 (232)
Q Consensus 61 ~~~~--------~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~~~~~~~~------- 119 (232)
.... ...|.|. .+|.+.. .+.......|+.+.|.|.+.+.+ .+.+.|+++|..+....
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~-~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 165 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTL-FPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSK 165 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEE-ECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEE
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEe-cCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceE
Confidence 4221 2345554 3444432 22222233699999999998853 46899999998774311
Q ss_pred ---cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 120 ---QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 120 ---~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
......+.|.|..+..+|.|.|+|.+.|..+.
T Consensus 166 ~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~ 200 (211)
T 3tv3_L 166 QSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 200 (211)
T ss_dssp CTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEE
T ss_pred CCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCC
Confidence 11111246888888888999999999997643
No 327
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.55 E-value=5.5e-14 Score=99.82 Aligned_cols=146 Identities=21% Similarity=0.335 Sum_probs=91.8
Q ss_pred ceEeecCCcEEEEeeeccC--CCCeEEEEeCC--ee---e---C-----------CCCcEEee------CCeEEECCCCC
Q psy15206 83 LSVAKEGQSVQLECHAEGH--PIPTISWRREN--NA---I---L-----------PNGQTIFT------GSTLQIPRITK 135 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~---~---~-----------~~~~~~~~------~~~l~i~~~~~ 135 (232)
...+.+|+++.|.|...+. ....+.|++.. .. + . ...++... ..+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (230)
T 3n9g_H 9 AEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRS 88 (230)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCh
Confidence 4667889999999998652 34569999742 11 1 0 01222221 12499999999
Q ss_pred CCCeEEEEEeEeCC-----CC--ceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecCCC--CeEEEeeCC
Q psy15206 136 EDRGAYYCVAQNGI-----GR--GARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAYPH--PILYWAKDG 202 (232)
Q Consensus 136 ~~~g~y~C~~~~~~-----~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~g 202 (232)
+|+|.|.|.+.+.. +. .......+.|. .+|.+...+....+..|+.+.|.|.+.+.++ +.+.| +|
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W--~~ 166 (230)
T 3n9g_H 89 EDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NS 166 (230)
T ss_dssp GGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE--GG
T ss_pred hhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE--CC
Confidence 99999999998743 11 11123355553 3556654344344568999999999988543 35999 44
Q ss_pred EEec-----------CCCeE----EEEEeccccCCceEEEEecC
Q psy15206 203 EIVV-----------NDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 203 ~~~~-----------~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+. .+..| .+.+......| |.|+|.|.
T Consensus 167 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~ 209 (230)
T 3n9g_H 167 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 209 (230)
T ss_dssp GTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEE
T ss_pred cccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEE
Confidence 3221 22333 34455666678 99999974
No 328
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.55 E-value=9.6e-14 Score=99.08 Aligned_cols=132 Identities=18% Similarity=0.366 Sum_probs=88.0
Q ss_pred eecCCCcceEeecCCeEEEEEEecCCC----CCeEEEEeCc--E------------------------------------
Q psy15206 15 ILNNSTQLSVAKEGQSVQLECHAEGHP----IPTISWRRNF--K------------------------------------ 52 (232)
Q Consensus 15 i~~~~~~~~~~~~G~~v~l~C~~~~~p----~~~~~W~~~~--~------------------------------------ 52 (232)
|+.. |.++.+.+|++++|.|.+.+.+ .+.+.|+|+. .
T Consensus 4 v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (240)
T 1moe_A 4 LTQS-PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPV 82 (240)
T ss_dssp EEEE-CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred eEee-CCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCC
Confidence 4444 6778899999999999999877 7889999841 0
Q ss_pred ---eeeeEEEEeeee-------cCceeecCCc-----EEecCCCCceEeecCCcEEEEeeeccCCC--CeEEEEeC--Ce
Q psy15206 53 ---RLGRLHLAIPYT-------SPEAQVDTPP-----VILNNSPQLSVAKEGQSVQLECHAEGHPI--PTISWRRE--NN 113 (232)
Q Consensus 53 ---~~~~~~~~~~~~-------~~~l~v~~~p-----~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~~--~~ 113 (232)
+.|.|.|..... ...|.|..++ ......+....+.+|+++.|.|.+.+.+. +.+.|+++ +.
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~ 162 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQ 162 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTS
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCC
Confidence 013445544211 3345655432 11111344567888999999999988763 58999996 22
Q ss_pred eeC-----------------CCCcEEee------CCeEEECCCCCCCCeEEEEEeEe
Q psy15206 114 AIL-----------------PNGQTIFT------GSTLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 114 ~~~-----------------~~~~~~~~------~~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+. ...++... ...|.|.+++.+|+|.|+|.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 163 GLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp CCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 210 11222222 13699999999999999999984
No 329
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.55 E-value=2.5e-14 Score=87.90 Aligned_cols=68 Identities=12% Similarity=0.282 Sum_probs=58.0
Q ss_pred ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC-----------CeEEEEEeccccCCceEEEEecC
Q psy15206 164 APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND-----------EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 164 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~-----------~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
||.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|+|||..+... ....|.+.++..+|+|.|+|.|.
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 567777788888999999999999999999999999999887532 23467788889999999999873
No 330
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.55 E-value=7.3e-14 Score=92.91 Aligned_cols=104 Identities=22% Similarity=0.381 Sum_probs=78.7
Q ss_pred CceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee-----CCeEEECCCCCCCCeE
Q psy15206 66 PEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT-----GSTLQIPRITKEDRGA 140 (232)
Q Consensus 66 ~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~~~g~ 140 (232)
..+.+..+|.+.. .+....+..|+.+.|.|.+.|.|.+.+.|++++..+....++... ...|.|.++...|.|.
T Consensus 34 ~~~~v~~~P~~~~-~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 112 (154)
T 1fhg_A 34 AEEKPHVKPYFTK-TILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAK 112 (154)
T ss_dssp CCCCCCEEEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEE
T ss_pred hcccCCCCCeEEc-cCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEE
Confidence 4455566676665 456678889999999999999999999999999887665554432 2389999999999999
Q ss_pred EEEEeEeCCCCceeeEEEEEEEeccEEEecc
Q psy15206 141 YYCVAQNGIGRGARRKIEVKVEFAPIVTVQS 171 (232)
Q Consensus 141 y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~ 171 (232)
|+|.+.|..|. ....+.|.|..+|.+...+
T Consensus 113 Y~C~a~N~~G~-~~~~~~l~V~~~p~~~~~~ 142 (154)
T 1fhg_A 113 YTCKAVNSLGE-ATCTAELLVETMGKEGEGE 142 (154)
T ss_dssp EEEEEEETTEE-EEEEEEEEEECC-------
T ss_pred EEEEEEECCCe-EEEEEEEEEeCcCcCCCCC
Confidence 99999998887 6677888888877765443
No 331
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.55 E-value=5.8e-14 Score=101.47 Aligned_cols=135 Identities=16% Similarity=0.230 Sum_probs=80.7
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCc----E-----------------------------------
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNF----K----------------------------------- 52 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~----~----------------------------------- 52 (232)
+|.++.. +.++.+.+|++|+|.|.+.+.+.+.+.|+|.. .
T Consensus 2 s~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 80 (259)
T 3omz_A 2 SSNLEGR-TKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLR 80 (259)
T ss_dssp ----------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCE
T ss_pred ccccccC-CceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEE
Confidence 4666666 78899999999999999998888899999810 0
Q ss_pred ---------eeeeEEEEeeee---------cCceeecCC----------------cEEecCCCCceEeecCCcEEEEeee
Q psy15206 53 ---------RLGRLHLAIPYT---------SPEAQVDTP----------------PVILNNSPQLSVAKEGQSVQLECHA 98 (232)
Q Consensus 53 ---------~~~~~~~~~~~~---------~~~l~v~~~----------------p~~~~~~~~~~~~~~g~~~~l~C~~ 98 (232)
+.|.|.|..... ...|.|..+ +..+...+....+.+|+++.|.|.+
T Consensus 81 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~ 160 (259)
T 3omz_A 81 MILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLY 160 (259)
T ss_dssp EEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEE
T ss_pred EEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEEC
Confidence 013455544211 233555442 1122334566788899999999998
Q ss_pred ccC-CCCeEEEEeCCe--eeC------------CCCcEEee------CCeEEECCCCCCCCeEEEEEeEe
Q psy15206 99 EGH-PIPTISWRRENN--AIL------------PNGQTIFT------GSTLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 99 ~~~-~~~~~~W~~~~~--~~~------------~~~~~~~~------~~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+. +.+.+.|++... .+. ...++... ...|.|.+++.+|+|.|.|.+..
T Consensus 161 ~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 161 ETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp ECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred CCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 764 677899998532 110 01122221 24699999999999999999974
No 332
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.54 E-value=4.4e-14 Score=101.20 Aligned_cols=131 Identities=22% Similarity=0.292 Sum_probs=86.2
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEeCc--------------------------------------------Eeee
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRRNF--------------------------------------------KRLG 55 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~--------------------------------------------~~~~ 55 (232)
+..+.+.+|++++|.|.+.+.+.+.+.|+|+. .+.|
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G 87 (245)
T 3nfj_J 8 PATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSG 87 (245)
T ss_dssp CSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCE
T ss_pred CceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCE
Confidence 67888999999999999999889999999811 0113
Q ss_pred eEEEEeee------------ecCceeecC------CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEEeCCeee
Q psy15206 56 RLHLAIPY------------TSPEAQVDT------PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWRRENNAI 115 (232)
Q Consensus 56 ~~~~~~~~------------~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~ 115 (232)
.|.|.... ....|.|.. +|.+....+....+..|+.+.|.|.+.+. |++ .+.|+++|..+
T Consensus 88 ~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l 167 (245)
T 3nfj_J 88 FYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEV 167 (245)
T ss_dssp EEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEEC
Confidence 56666543 122444443 33332212222223348899999999884 444 68999999887
Q ss_pred CCCC---------------cEEeeCCeEEECCCCCCC-CeEEEEEeEeCCC
Q psy15206 116 LPNG---------------QTIFTGSTLQIPRITKED-RGAYYCVAQNGIG 150 (232)
Q Consensus 116 ~~~~---------------~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~~ 150 (232)
.... ......+.|.|......| .|.|+|.+.+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~ 218 (245)
T 3nfj_J 168 HSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp CTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred CCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCC
Confidence 5321 111112367777777777 6699999998643
No 333
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.54 E-value=6.1e-14 Score=101.15 Aligned_cols=129 Identities=19% Similarity=0.322 Sum_probs=84.8
Q ss_pred CcceEeecCCeEEEEEEecCC--CCCeEEEEeCc-----------------------------------------Eeeee
Q psy15206 20 TQLSVAKEGQSVQLECHAEGH--PIPTISWRRNF-----------------------------------------KRLGR 56 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~--p~~~~~W~~~~-----------------------------------------~~~~~ 56 (232)
++.+.+.+|++++|.|.+.+. +.+.+.|+|+. .+.|.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 88 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEAD 88 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEE
Confidence 556889999999999999976 78899999831 01135
Q ss_pred EEEEeee---------ecCceeecCCcE--------------------EecCCCCceEeecCCcEEEEeeeccCC--CCe
Q psy15206 57 LHLAIPY---------TSPEAQVDTPPV--------------------ILNNSPQLSVAKEGQSVQLECHAEGHP--IPT 105 (232)
Q Consensus 57 ~~~~~~~---------~~~~l~v~~~p~--------------------~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~ 105 (232)
|.|.... ....|.|..++. .+. .+....+.+|+++.|.|.+.+.+ .+.
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 167 (256)
T 3ux9_B 89 YYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLV-ESGGGLVQPGGSLRLSCAASGFTFSSYA 167 (256)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEC----------------------CCEEE-EECCEEECTTCCEEEEEEEESSCGGGSE
T ss_pred EEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEE-cCCCeEEcCCCeEEEEEEEeCCcccccE
Confidence 6665432 134555554431 111 12334577899999999998766 678
Q ss_pred EEEEeCC--eee------CC-----------CCcEEee------CCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 106 ISWRREN--NAI------LP-----------NGQTIFT------GSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 106 ~~W~~~~--~~~------~~-----------~~~~~~~------~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
+.|+++. ..+ .. ..++... ...|.|.+++.+|+|.|.|.+.+..
T Consensus 168 v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 168 MSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 9999863 221 00 1122211 1249999999999999999999853
No 334
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.54 E-value=6.9e-14 Score=87.26 Aligned_cols=99 Identities=26% Similarity=0.463 Sum_probs=64.6
Q ss_pred CceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe--eCCeEEECCCCCCCCeEEEE
Q psy15206 66 PEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF--TGSTLQIPRITKEDRGAYYC 143 (232)
Q Consensus 66 ~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~~g~y~C 143 (232)
+.+.+..+|.+.. .+....+..|+.+.|.|.+.|.|.+.+.|++++..+........ ..+.|.|.++..+|.|.|+|
T Consensus 3 ~~v~~~~~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 81 (108)
T 3kvq_A 3 LTVLERVAPTITG-NLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTC 81 (108)
T ss_dssp --------CCCBS-CCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEE
T ss_pred eeECccCCCceec-CCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEE
Confidence 3455555666554 56677888999999999999999999999999988765444433 35689999999999999999
Q ss_pred EeEeCCCCceeeEEEEEEEeccE
Q psy15206 144 VAQNGIGRGARRKIEVKVEFAPI 166 (232)
Q Consensus 144 ~~~~~~~~~~~~~~~l~v~~~p~ 166 (232)
.+.|..|. ....+.+.|..+|.
T Consensus 82 ~a~n~~g~-~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 82 QACSVLGC-AKVEAFFIIEGAQE 103 (108)
T ss_dssp EEC----C-EEEEEEEEEEC---
T ss_pred EEEeCCCc-eEEEEEEEEeCCCc
Confidence 99998877 55667777776553
No 335
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.54 E-value=2.3e-14 Score=97.49 Aligned_cols=118 Identities=12% Similarity=0.146 Sum_probs=78.8
Q ss_pred cceEeecCCeEEEEEEecC--CCCCeEEEEeCcEee----------------------------------eeEEEEeeee
Q psy15206 21 QLSVAKEGQSVQLECHAEG--HPIPTISWRRNFKRL----------------------------------GRLHLAIPYT 64 (232)
Q Consensus 21 ~~~~~~~G~~v~l~C~~~~--~p~~~~~W~~~~~~~----------------------------------~~~~~~~~~~ 64 (232)
..+.+.+|++++|.|.... .+.+.|.|+|++..+ |.|.|.....
T Consensus 4 ~~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~ 83 (176)
T 1hng_A 4 GTVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYST 83 (176)
T ss_dssp EEEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEET
T ss_pred eEEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeC
Confidence 3567899999999995433 556789999976321 2444443211
Q ss_pred --------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCC
Q psy15206 65 --------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKE 136 (232)
Q Consensus 65 --------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 136 (232)
.+.|.|..++ ........+..+.|.|.+.+.|.+.+.|++++..+.... .+.|..+..+
T Consensus 84 ~g~~~~~~~~~l~V~~~~------~~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~-------~~~i~~~~~~ 150 (176)
T 1hng_A 84 NGTRILNKALDLRILEMV------SKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLR-------QKTMSYQWTN 150 (176)
T ss_dssp TCCEEEEEEEEEEEECCC------CCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEES-------SSEEEEECSC
T ss_pred CCCEEEEEEEEEEEeCCC------CCCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCC-------cEEEEEEEcc
Confidence 2233443321 111122235569999999999999999999998764322 2445577899
Q ss_pred CCeEEEEEeEeCCCC
Q psy15206 137 DRGAYYCVAQNGIGR 151 (232)
Q Consensus 137 ~~g~y~C~~~~~~~~ 151 (232)
|.|.|+|.+.|..|.
T Consensus 151 d~G~Y~C~a~N~~g~ 165 (176)
T 1hng_A 151 LRAPFKCKAVNRVSQ 165 (176)
T ss_dssp CSSCEEEEEEETTEE
T ss_pred CCeEEEEEEEecCCC
Confidence 999999999998775
No 336
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.54 E-value=1e-13 Score=85.65 Aligned_cols=94 Identities=20% Similarity=0.273 Sum_probs=73.3
Q ss_pred eeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee----CCeEEECCCCCCCCeEEEE
Q psy15206 68 AQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT----GSTLQIPRITKEDRGAYYC 143 (232)
Q Consensus 68 l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~C 143 (232)
+.+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+.... ...|.|.++..+|.|.|.|
T Consensus 3 l~~~~~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 81 (103)
T 3qp3_A 3 FTLDHAPRITL-RMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRA 81 (103)
T ss_dssp TTTCEEEEEEE-CCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CCCCCCCEEEe-CCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEE
Confidence 34445666654 556778889999999999999999999999999887665554332 2369999999999999999
Q ss_pred EeEeCCCCceeeEEEEEEEe
Q psy15206 144 VAQNGIGRGARRKIEVKVEF 163 (232)
Q Consensus 144 ~~~~~~~~~~~~~~~l~v~~ 163 (232)
.+.|..|. ......|.|..
T Consensus 82 ~a~N~~G~-~~~~~~l~V~~ 100 (103)
T 3qp3_A 82 VCTNYKGE-ASDYATLDVTG 100 (103)
T ss_dssp EEEETTEE-EEEEEEEEEEC
T ss_pred EEEeCCCc-EEEEEEEEEEC
Confidence 99998876 45566666654
No 337
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.54 E-value=7.5e-13 Score=93.29 Aligned_cols=143 Identities=17% Similarity=0.266 Sum_probs=98.7
Q ss_pred CCceEeecCCcEEEEeeecc-CC---CCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCce-ee
Q psy15206 81 PQLSVAKEGQSVQLECHAEG-HP---IPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGA-RR 155 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~-~~---~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~-~~ 155 (232)
|....+..|+.+.|.|.+.+ .| +..++|++++..+.. ....|.+..+...++|.|.|.+.+..+... ..
T Consensus 9 P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG------aT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs 82 (304)
T 3shs_A 9 SNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN------NTATLTVADATSENAGSYKVTVQDTDTMTSVES 82 (304)
T ss_dssp ESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC------CSSEEEESSCCGGGCEEEEEEEEETTTCCEEEC
T ss_pred CCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC------CcceEEeeeccccCCeEEEEEEEECCCCeeeee
Confidence 44456678999999999865 45 346999999977542 234788999999999999999998765432 22
Q ss_pred EEEEEEEeccEEEe-ccceeeeeccCeEEEEEEe--e-cCC-----CCeEEEeeCCEEecCCCeEEEEEeccccCCceEE
Q psy15206 156 KIEVKVEFAPIVTV-QSTRIGQALHHDMDLDCHI--E-AYP-----HPILYWAKDGEIVVNDEYHSISNFGTSEGTTGSL 226 (232)
Q Consensus 156 ~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~--~-~~p-----~~~~~W~~~g~~~~~~~~~~~~~~~~~~~d~g~Y 226 (232)
.+.+.....+.+.. .|.......|..+.|.+.+ . |.+ ...++|+|||..+.....+.+. ..+..++|.|
T Consensus 83 ~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgAq~lT~s--S~TateaG~Y 160 (304)
T 3shs_A 83 EVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQDITIQ--EFTADKNGVY 160 (304)
T ss_dssp CCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESSSEEEEC--SCCGGGCEEE
T ss_pred eEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCcccccee--eEEecCCeEE
Confidence 22223222333333 3555555667888998876 4 344 3589999999988766544443 3455889999
Q ss_pred EEecC
Q psy15206 227 QCKVP 231 (232)
Q Consensus 227 ~C~~~ 231 (232)
.|+++
T Consensus 161 tV~VT 165 (304)
T 3shs_A 161 TVKVW 165 (304)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99874
No 338
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.53 E-value=3e-13 Score=93.38 Aligned_cols=125 Identities=17% Similarity=0.257 Sum_probs=79.4
Q ss_pred CcceEeecCCeEEEEEEecC-CCCCeEEEEeCcEee------------------------------------------ee
Q psy15206 20 TQLSVAKEGQSVQLECHAEG-HPIPTISWRRNFKRL------------------------------------------GR 56 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~-~p~~~~~W~~~~~~~------------------------------------------~~ 56 (232)
|..+.+.+|++|+|.|.+.+ .+.+.+.|++++..+ |.
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~ 84 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGS 84 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEE
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCce
Confidence 67788999999999999985 455799999964311 12
Q ss_pred EEEEeee------ecCceeecCCcEEecCCCCceEeecCC-cEEEEeeeccC-CCCeEEEEeCCeeeCCCCcEEeeCCeE
Q psy15206 57 LHLAIPY------TSPEAQVDTPPVILNNSPQLSVAKEGQ-SVQLECHAEGH-PIPTISWRRENNAILPNGQTIFTGSTL 128 (232)
Q Consensus 57 ~~~~~~~------~~~~l~v~~~p~~~~~~~~~~~~~~g~-~~~l~C~~~~~-~~~~~~W~~~~~~~~~~~~~~~~~~~l 128 (232)
|.|.... ..+.|.|..++..............|. .+.|.|.+.+. +.+.+.|++++..+.. .+.|
T Consensus 85 Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~-------~~~l 157 (193)
T 2if7_A 85 YRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS-------QPNL 157 (193)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES-------SSEE
T ss_pred EEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC-------CCeE
Confidence 3332211 134555554432111000111122455 79999999884 5789999999876532 3346
Q ss_pred EECCCCCC-CCeEEEEEeEeCCCC
Q psy15206 129 QIPRITKE-DRGAYYCVAQNGIGR 151 (232)
Q Consensus 129 ~i~~~~~~-~~g~y~C~~~~~~~~ 151 (232)
.|...... |.|.|+|.+.|..+.
T Consensus 158 ~i~~~~~~~d~G~Y~C~a~N~~g~ 181 (193)
T 2if7_A 158 TVSWDPRISSEQDYTCIAENAVSN 181 (193)
T ss_dssp EEEECTTTCSCCEEEEEEEETTEE
T ss_pred EEEeccCcCCCCcEEEEEECCCCc
Confidence 66544444 899999999998765
No 339
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.53 E-value=1.6e-13 Score=98.34 Aligned_cols=132 Identities=17% Similarity=0.324 Sum_probs=86.2
Q ss_pred eecCCCcceEeecCCeEEEEEEecCCC-----CCeEEEEeCc----E---------------------------------
Q psy15206 15 ILNNSTQLSVAKEGQSVQLECHAEGHP-----IPTISWRRNF----K--------------------------------- 52 (232)
Q Consensus 15 i~~~~~~~~~~~~G~~v~l~C~~~~~p-----~~~~~W~~~~----~--------------------------------- 52 (232)
++.. |.++.+.+|++++|.|.+.+.+ .+.+.|+|+. .
T Consensus 4 v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 4 MTQT-PLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred EEec-CCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 4444 6788899999999999999876 6899999831 0
Q ss_pred ----eeeeEEEEeeee-------cCceeecCCc-------------EEecCCCCceEeecCCcEEEEeeeccCC--CCeE
Q psy15206 53 ----RLGRLHLAIPYT-------SPEAQVDTPP-------------VILNNSPQLSVAKEGQSVQLECHAEGHP--IPTI 106 (232)
Q Consensus 53 ----~~~~~~~~~~~~-------~~~l~v~~~p-------------~~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~ 106 (232)
+.|.|.|..... ...|.|..++ ..+. .+....+.+|+++.|.|.+.+.+ .+.+
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 161 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQ-QSGPELKKPGETVKISCKATNYAFTDYSM 161 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEE-ECCCEEECTTCCEEEEEEEESSCGGGSCE
T ss_pred CCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEe-CCCceeecCCCcEEEEEEEcCcccCCcEE
Confidence 012444443111 2356665432 1222 22334578899999999998864 4689
Q ss_pred EEEeCC--eee------C-----------CCCcEEee------CCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 107 SWRREN--NAI------L-----------PNGQTIFT------GSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 107 ~W~~~~--~~~------~-----------~~~~~~~~------~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
.|++++ ..+ . ...++... ...|.|.+++.+|+|.|.|.+.+.
T Consensus 162 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 162 HWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 999863 211 0 01222221 237999999999999999999984
No 340
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.53 E-value=7e-15 Score=103.04 Aligned_cols=131 Identities=16% Similarity=0.245 Sum_probs=88.5
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEeCc--Ee---------------------------------------eeeEE
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRRNF--KR---------------------------------------LGRLH 58 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~--~~---------------------------------------~~~~~ 58 (232)
|.++.+.+|++++|.|.+.+.+.+.+.|+|+. .. .|.|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 66788999999999999988777789999831 10 03555
Q ss_pred EEeee---------ecCceeec----CCcEEecCCCCceEeecCCcEEEEeeeccC-CC-CeEEEEeCCeeeCCCCcE--
Q psy15206 59 LAIPY---------TSPEAQVD----TPPVILNNSPQLSVAKEGQSVQLECHAEGH-PI-PTISWRRENNAILPNGQT-- 121 (232)
Q Consensus 59 ~~~~~---------~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~~~~~~~~~~~-- 121 (232)
|.... ....|.|. .+|.+.. ........+|+.+.|.|.+.+. |. +.+.|+++|..+......
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~-~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 164 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTV-FPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTK 164 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEEC-CCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEe-eCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCC
Confidence 55541 12334442 3344332 2222234468899999999886 54 689999999877533110
Q ss_pred -------EeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 122 -------IFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 122 -------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
....+.|.|.++..+|.|.|+|.+.|..+.
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 165 PSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp CBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred ceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 111245888999999999999999997654
No 341
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.52 E-value=1e-13 Score=98.17 Aligned_cols=148 Identities=20% Similarity=0.294 Sum_probs=89.8
Q ss_pred ceEeecCCcEEEEeeeccC--CCCeEEEEeCC--ee---e---C-----------CCCcEEee------CCeEEECCCCC
Q psy15206 83 LSVAKEGQSVQLECHAEGH--PIPTISWRREN--NA---I---L-----------PNGQTIFT------GSTLQIPRITK 135 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~--~~---~---~-----------~~~~~~~~------~~~l~i~~~~~ 135 (232)
...+.+|+++.|.|...+. ....+.|++.. .. + . ...++... ..+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (226)
T 3mlr_H 9 GEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQA 88 (226)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCG
T ss_pred CEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCc
Confidence 4677899999999998653 34579999842 11 0 0 01122211 12499999999
Q ss_pred CCCeEEEEEeEeCCC--------CceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecCCC--CeEEEeeC
Q psy15206 136 EDRGAYYCVAQNGIG--------RGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAYPH--PILYWAKD 201 (232)
Q Consensus 136 ~~~g~y~C~~~~~~~--------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~ 201 (232)
+|+|.|.|.+.+..+ ........+.|. .+|.+...+.......|+.+.|.|.+.++++ +.+.|...
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W~~~ 168 (226)
T 3mlr_H 89 SDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 168 (226)
T ss_dssp GGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEECCc
Confidence 999999999876420 001122344443 3566654444444568999999999988543 46999221
Q ss_pred CEE---------ecCCCeE----EEEEeccccCCceEEEEecC
Q psy15206 202 GEI---------VVNDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 202 g~~---------~~~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.. ...++.| .+.+......| |.|+|.|.
T Consensus 169 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~ 210 (226)
T 3mlr_H 169 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 210 (226)
T ss_dssp TCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEE
T ss_pred cccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEE
Confidence 110 1123333 34455556677 99999874
No 342
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.52 E-value=1.6e-12 Score=107.14 Aligned_cols=172 Identities=14% Similarity=0.171 Sum_probs=112.2
Q ss_pred cCCeEEEEEEecCCCCCeEEEEeCcEeee-----eE--------------EEEe-----eee--cCceee---cCCcEEe
Q psy15206 27 EGQSVQLECHAEGHPIPTISWRRNFKRLG-----RL--------------HLAI-----PYT--SPEAQV---DTPPVIL 77 (232)
Q Consensus 27 ~G~~v~l~C~~~~~p~~~~~W~~~~~~~~-----~~--------------~~~~-----~~~--~~~l~v---~~~p~~~ 77 (232)
.+.++.|.|.+.|.|.+.+.|.+++.... ++ .+.. .+. .+.+.. ..+|.+.
T Consensus 90 ~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~ 169 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL 169 (731)
T ss_dssp CSEEEEEEEEETTCCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC
T ss_pred CcceEEEEEecCCCCccceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccc
Confidence 35689999999999999999999663221 11 2211 111 111111 2345554
Q ss_pred cCCCCceEeecCCcEEEEeeeccCCCCeEE-EE--eCCeeeCCCCcEEe----eCCeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 78 NNSPQLSVAKEGQSVQLECHAEGHPIPTIS-WR--RENNAILPNGQTIF----TGSTLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 78 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~-W~--~~~~~~~~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
.+....+..|+.+.|.|.+.|.|.+.+. |+ ++|..+........ ..+.|.|.++...|.|.|.|.+.|..|
T Consensus 170 --~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G 247 (731)
T 2v5y_A 170 --RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGG 247 (731)
T ss_dssp --CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTE
T ss_pred --cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCC
Confidence 4556788899999999999999999887 88 56655432211111 125899999999999999999999887
Q ss_pred CceeeEEEEEEEeccEEEeccceeeeeccCeEEEEEEeecC----CCC--eEEEeeC
Q psy15206 151 RGARRKIEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAY----PHP--ILYWAKD 201 (232)
Q Consensus 151 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~----p~~--~~~W~~~ 201 (232)
........+.|..+|.....+... ......+.|.|..... +.. .+.|...
T Consensus 248 ~~~s~~~~l~V~~~P~~~~~p~~~-~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~ 303 (731)
T 2v5y_A 248 VGISNYAELVVKEPPVPIAPPQLA-SVGATYLWIQLNANSINGDGPIVAREVEYCTA 303 (731)
T ss_dssp EEECCCEEEEEECCCCBSSCCEEE-EECSSCEEEECCCSSBSSCSCCCEEEEEEEES
T ss_pred CcceeeEEEEEecCCCCCCCccee-ccCCceEEEEeCCcccCCCCccEEEEEEEEEC
Confidence 645556677887776644333332 2345678888876322 222 3667654
No 343
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=2.8e-13 Score=83.27 Aligned_cols=91 Identities=32% Similarity=0.550 Sum_probs=71.4
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC-CCc-EEeeCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP-NGQ-TIFTGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~-~~~-~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
.+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..+ ....++.|.|.++..+|.|.|+|.+.|..
T Consensus 7 ~~P~i~~-~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 85 (100)
T 2edj_A 7 GPPIILQ-GPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSS 85 (100)
T ss_dssp SSCEEEE-CCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSS
T ss_pred CCCEEEe-CcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCC
Confidence 4555554 56667888999999999999999999999999988753 222 23346689999999999999999999988
Q ss_pred CCceeeEEEEEEEec
Q psy15206 150 GRGARRKIEVKVEFA 164 (232)
Q Consensus 150 ~~~~~~~~~l~v~~~ 164 (232)
|. ....+.|.|..+
T Consensus 86 g~-~~~~~~l~V~~~ 99 (100)
T 2edj_A 86 GE-TSWSAVLDVTES 99 (100)
T ss_dssp CC-CBCCEEEEEESC
T ss_pred CC-EEEEEEEEEecC
Confidence 76 456667776654
No 344
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.52 E-value=1.2e-13 Score=96.63 Aligned_cols=130 Identities=15% Similarity=0.209 Sum_probs=84.2
Q ss_pred CcceEeecCCeEEEEEEecCCC---CCeEEEEeCcE--e---------------e------------------------e
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP---IPTISWRRNFK--R---------------L------------------------G 55 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p---~~~~~W~~~~~--~---------------~------------------------~ 55 (232)
|.++.+.+|++++|.|.+.+.+ .+.+.|+|+.. . . |
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 5678899999999999999866 47899998421 0 0 2
Q ss_pred eEEEEeeee-------cCceeec----CCcEEecCCCCceEeecCCcEEEEeeeccCC-CC-eEEEEeCCeeeCCCCc--
Q psy15206 56 RLHLAIPYT-------SPEAQVD----TPPVILNNSPQLSVAKEGQSVQLECHAEGHP-IP-TISWRRENNAILPNGQ-- 120 (232)
Q Consensus 56 ~~~~~~~~~-------~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~-~~~W~~~~~~~~~~~~-- 120 (232)
.|.|..... ...|.|. .+|.+....+. .....|+.+.|.|.+.+.+ ++ .+.|+++|..+.....
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 165 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPS-SEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETT 165 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEC
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCC-HHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecC
Confidence 344433211 2234442 23333321121 2233688999999998854 33 7999999987754311
Q ss_pred --EE------eeCCeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 121 --TI------FTGSTLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 121 --~~------~~~~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
.. ...+.|.|..+..+|.|.|+|.+.|...
T Consensus 166 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 203 (212)
T 1q0x_L 166 QPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGH 203 (212)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTE
T ss_pred CceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCc
Confidence 01 1123588889999999999999998643
No 345
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.52 E-value=1.8e-13 Score=96.33 Aligned_cols=142 Identities=15% Similarity=0.158 Sum_probs=88.9
Q ss_pred CcceEeecCCeEEEEEEecCCCCC---eEEEEeCcE--------------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIP---TISWRRNFK-------------------------------------------- 52 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~---~~~W~~~~~-------------------------------------------- 52 (232)
|+++.+..|++|+|.|.+.+.+.+ .+.|+|++.
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 445678899999999999986655 489998421
Q ss_pred ------eeeeEEEEeeee-------cCceeecCCcEEecCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCeeeCCC
Q psy15206 53 ------RLGRLHLAIPYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENNAILPN 118 (232)
Q Consensus 53 ------~~~~~~~~~~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~ 118 (232)
+.|.|.|..... ...+.+..++.... .+.......+..+.+.|.+ .+.|++.+.|++++......
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~ 166 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHA-EAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKD 166 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEE-EECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceee-cccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCC
Confidence 114666655322 22344444444332 2222334456667777765 45777889999887654321
Q ss_pred CcE-------EeeCCeEEECCCCCCCCeEEEEEeEeCCCCc-eeeEEEEEEE
Q psy15206 119 GQT-------IFTGSTLQIPRITKEDRGAYYCVAQNGIGRG-ARRKIEVKVE 162 (232)
Q Consensus 119 ~~~-------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v~ 162 (232)
... ....+.|.|.++..+|.|.|+|.+.|..+.. ....+.|.|.
T Consensus 167 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 167 TQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred cceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 111 1122469999999999999999999976542 3444555544
No 346
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.52 E-value=4.5e-14 Score=101.61 Aligned_cols=138 Identities=14% Similarity=0.217 Sum_probs=89.0
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCC-----CCeEEEEeCcE----------------------------------
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHP-----IPTISWRRNFK---------------------------------- 52 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p-----~~~~~W~~~~~---------------------------------- 52 (232)
.+.++.. +.++.+.+|++++|.|.+.+.+ .+.+.|+|+..
T Consensus 34 ~~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 112 (252)
T 3bkj_L 34 DVLMTQT-PLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLR 112 (252)
T ss_dssp CCCEEEE-CSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred ccEEEeC-CceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEE
Confidence 4555555 6788899999999999999876 58999998421
Q ss_pred -------eeeeEEEEeeee-------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeCCe
Q psy15206 53 -------RLGRLHLAIPYT-------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRENN 113 (232)
Q Consensus 53 -------~~~~~~~~~~~~-------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~ 113 (232)
+.|.|.|..... ...|.|.. +|.+....+. ....+|+.+.|.|.+.+ .|.+ .+.|+++|.
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 191 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKIDGS 191 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHHHTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCC-hhhcCCCcEEEEEEEeeEeCCCcEEEEEECCe
Confidence 002344433111 12455542 2333221121 12236889999999988 4443 799999998
Q ss_pred eeCCC-Cc----------EEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 114 AILPN-GQ----------TIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 114 ~~~~~-~~----------~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.+... .. .....+.|.|.++..+|.|.|+|.+.|....
T Consensus 192 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 192 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp EECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred ecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 76433 00 0011235889999999999999999986543
No 347
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.51 E-value=6e-13 Score=97.36 Aligned_cols=142 Identities=20% Similarity=0.318 Sum_probs=89.8
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCcE----e------------------e---------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNFK----R------------------L--------------------- 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~~----~------------------~--------------------- 54 (232)
|.++.+.+|++|+|.|.+.+.+ .+.+.|+|+.. . .
T Consensus 33 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 112 (282)
T 1qok_A 33 SGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSL 112 (282)
T ss_dssp CCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcC
Confidence 6788999999999999998864 67899998420 0 0
Q ss_pred -----eeEEEEeeee-----------cCceeecCCcE--------------EecCCCCceEeecCCcEEEEeeeccCCCC
Q psy15206 55 -----GRLHLAIPYT-----------SPEAQVDTPPV--------------ILNNSPQLSVAKEGQSVQLECHAEGHPIP 104 (232)
Q Consensus 55 -----~~~~~~~~~~-----------~~~l~v~~~p~--------------~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 104 (232)
|.|.|..... ...|.|..++. .+...+....+.+|+++.|.|.+.+.+ +
T Consensus 113 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~ 191 (282)
T 1qok_A 113 TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-S 191 (282)
T ss_dssp CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-S
T ss_pred ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-c
Confidence 1333332111 12455544321 111124456688899999999999888 8
Q ss_pred eEEEEe--CCeeeC------------CCCcEEe----eCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEE
Q psy15206 105 TISWRR--ENNAIL------------PNGQTIF----TGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVE 162 (232)
Q Consensus 105 ~~~W~~--~~~~~~------------~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 162 (232)
.+.|++ ++..+. ...++.. ...+|.|.++..+|+|.|+|.+.+...........|.|.
T Consensus 192 ~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 192 YMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp CCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred eEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEe
Confidence 999999 454321 1122321 123799999999999999999987432222233344443
No 348
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.51 E-value=2.5e-13 Score=95.43 Aligned_cols=131 Identities=15% Similarity=0.243 Sum_probs=83.6
Q ss_pred CcceEeecCCeEEEEEEec-CCC-CCeEEEEeCcE-----------------------------------------eeee
Q psy15206 20 TQLSVAKEGQSVQLECHAE-GHP-IPTISWRRNFK-----------------------------------------RLGR 56 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~-~~p-~~~~~W~~~~~-----------------------------------------~~~~ 56 (232)
|.++.+.+|++++|.|.+. +.+ .+.+.|+|+.. +.|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 5678899999999999954 443 57899998321 0024
Q ss_pred EEEEeeee--------cCceeec---CCcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeCCeeeCCC-CcE-
Q psy15206 57 LHLAIPYT--------SPEAQVD---TPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRENNAILPN-GQT- 121 (232)
Q Consensus 57 ~~~~~~~~--------~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~~~~~~-~~~- 121 (232)
|.|..... ...|.|. .+|.+....+.. ....|+.+.|.|.+.+ .|.+ .+.|+++|..+... ...
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~ 165 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSD-EQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESV 165 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEE
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCCh-hhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEec
Confidence 55544221 2234443 233333212221 1225889999999988 4554 79999999876443 010
Q ss_pred ---------EeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 122 ---------IFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 122 ---------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
....+.|.|..+..+|.|.|+|.+.|....
T Consensus 166 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 166 TEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred CcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 011236889999999999999999986543
No 349
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.51 E-value=2.2e-13 Score=82.86 Aligned_cols=81 Identities=22% Similarity=0.430 Sum_probs=66.7
Q ss_pred CCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 79 NSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 79 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
..+....+.+|+.+.|.|.+.+.| +.+.|++++..+....+.....+.|.|.++..+|.|.|.|.+.|..|. ....+.
T Consensus 14 ~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~-~~~~~~ 91 (95)
T 2ckn_A 14 VEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGS-DTTYFS 91 (95)
T ss_dssp TBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTEE-EEEEEE
T ss_pred cCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCCc-EEEEEE
Confidence 345667888999999999999887 799999999888766666667889999999999999999999998776 444444
Q ss_pred EEE
Q psy15206 159 VKV 161 (232)
Q Consensus 159 l~v 161 (232)
+.|
T Consensus 92 l~V 94 (95)
T 2ckn_A 92 VNV 94 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 350
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.51 E-value=2e-13 Score=84.94 Aligned_cols=92 Identities=26% Similarity=0.502 Sum_probs=71.4
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee-CC---eEEECCCCCCCCeEEEEEeEe
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT-GS---TLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~---~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+.... ++ .|.|.++..+|.|.|+|.+.|
T Consensus 12 ~~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 12 SPPCFLR-FPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeeEc-CCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEc
Confidence 3455544 566778889999999999999999999999999887655544332 23 799999999999999999999
Q ss_pred CCCCceeeEEEEEEEecc
Q psy15206 148 GIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 148 ~~~~~~~~~~~l~v~~~p 165 (232)
..|. ....+.+.|..+|
T Consensus 91 ~~g~-~~~~~~l~V~~~P 107 (107)
T 3irg_B 91 AAGE-AYAAAAVTVLEPP 107 (107)
T ss_dssp TTEE-EEEEEEEEEEC--
T ss_pred CCCc-EEEEEEEEEEcCC
Confidence 8776 5566777776554
No 351
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.51 E-value=7.6e-14 Score=98.26 Aligned_cols=139 Identities=12% Similarity=0.167 Sum_probs=84.5
Q ss_pred cCCCeeecCCCcceE--eecCCeEEEEEEecCC---C-CCeEEEEeCcEee-----------------------------
Q psy15206 10 DTPPVILNNSTQLSV--AKEGQSVQLECHAEGH---P-IPTISWRRNFKRL----------------------------- 54 (232)
Q Consensus 10 ~~~P~i~~~~~~~~~--~~~G~~v~l~C~~~~~---p-~~~~~W~~~~~~~----------------------------- 54 (232)
..+|.+.+. ++... +.+|++++|.|.+.+. | .+.+.|+|++...
T Consensus 7 ~~~p~v~~~-pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~ 85 (218)
T 2rgs_A 7 EGGPSVFIF-PPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW 85 (218)
T ss_dssp --CCEEEEE-CCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHH
T ss_pred CCCCEEEEE-CcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHc
Confidence 457888777 44444 8899999999999975 3 3799999965332
Q ss_pred ---eeEEEEeeeecC------c----eeecCCcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeCCeeeCCCC
Q psy15206 55 ---GRLHLAIPYTSP------E----AQVDTPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRENNAILPNG 119 (232)
Q Consensus 55 ---~~~~~~~~~~~~------~----l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~~~~~~~ 119 (232)
|.|.|....... . +.+..+|.+........ ...|+.+.|.|.+.| .|.+ .+.|+++|..+....
T Consensus 86 ~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~ 164 (218)
T 2rgs_A 86 MSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAE-QLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYK 164 (218)
T ss_dssp HTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGG-GTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEE
T ss_pred CCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChH-HhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCce
Confidence 234444322211 1 12334454432222211 225899999999998 5665 899999998763211
Q ss_pred c---EEeeCC------eEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 120 Q---TIFTGS------TLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 120 ~---~~~~~~------~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
. ....++ .|.+.....+|.|.|+|.+.|...
T Consensus 165 ~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 165 DTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred ecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 1 111222 244444444468999999999654
No 352
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.50 E-value=1.7e-13 Score=95.65 Aligned_cols=137 Identities=11% Similarity=0.146 Sum_probs=83.7
Q ss_pred CeeecCCCcceE-eecCCeEEEEEEecCCC----CCeEEEEeCcEee--------------------------------e
Q psy15206 13 PVILNNSTQLSV-AKEGQSVQLECHAEGHP----IPTISWRRNFKRL--------------------------------G 55 (232)
Q Consensus 13 P~i~~~~~~~~~-~~~G~~v~l~C~~~~~p----~~~~~W~~~~~~~--------------------------------~ 55 (232)
|.+.+.+|.... +.+|++++|.|.+.+.+ ...+.|+|++... |
T Consensus 2 p~v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 81 (207)
T 2vol_A 2 SSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTC
T ss_pred CcEEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCC
Confidence 566665355444 89999999999999763 3589999965322 2
Q ss_pred eEEEEeeee--------cCce--eecCCcEEecCCCCceEeecCCcEEEEeeeccC-CC-CeEEEEeCCeeeCCCCc---
Q psy15206 56 RLHLAIPYT--------SPEA--QVDTPPVILNNSPQLSVAKEGQSVQLECHAEGH-PI-PTISWRRENNAILPNGQ--- 120 (232)
Q Consensus 56 ~~~~~~~~~--------~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~~~~~~~~~~--- 120 (232)
.|.|..... .+.+ .+..+|.+........ ...|+.+.|.|.+.|. |. ..+.|+++|..+.....
T Consensus 82 ~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 160 (207)
T 2vol_A 82 EFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKE-QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQP 160 (207)
T ss_dssp CEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTG-GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCC
T ss_pred EEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHH-HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCc
Confidence 444443221 1111 3344555432222211 2258899999999884 44 38999999987632111
Q ss_pred EEeeCC------eEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 121 TIFTGS------TLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 121 ~~~~~~------~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
....++ .|.+.....+|.|.|+|.+.|...
T Consensus 161 ~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 161 IMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp EECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred eECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 111122 345555555688999999999654
No 353
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=3.4e-13 Score=85.47 Aligned_cols=93 Identities=18% Similarity=0.303 Sum_probs=70.7
Q ss_pred CCcEEecC--CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEE-ee--CCeEEECCCCCCCCeEEEEEeE
Q psy15206 72 TPPVILNN--SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTI-FT--GSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 72 ~~p~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~-~~--~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
.+|.+... ......+.+|+.+.|.|.+.|.|.+.+.|++++..+....... .. ...|.|.++...|.|.|+|.+.
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 99 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQ 99 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEEEE
Confidence 34555322 2456788899999999999999999999999998875322221 22 2359999999999999999999
Q ss_pred eCCCCceeeEEEEEEEecc
Q psy15206 147 NGIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p 165 (232)
|..|. ....+.+.|..+|
T Consensus 100 N~~G~-~~~~~~l~V~~~P 117 (118)
T 2e7c_A 100 IENMK-DTATIRIRVVEKA 117 (118)
T ss_dssp CSSCE-ECCEEEEEEECCC
T ss_pred eCCCe-EEEEEEEEEEcCC
Confidence 98886 5667777776654
No 354
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.50 E-value=5.9e-14 Score=98.97 Aligned_cols=130 Identities=17% Similarity=0.205 Sum_probs=86.0
Q ss_pred CcceEeecCCeEEEEEEecC-CCCC----eEEEEeCcE------------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEG-HPIP----TISWRRNFK------------------------------------------ 52 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~-~p~~----~~~W~~~~~------------------------------------------ 52 (232)
+.++.+.+|++++|.|.+.+ .+.+ .+.|+|++.
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 56677889999999999964 4433 499999631
Q ss_pred ---eeeeEEEEeeee-------cCceeecCCcEEecCCCCceEeecCCcE-EEEeeec-cCCCCeEEEEeCCeeeCCCCc
Q psy15206 53 ---RLGRLHLAIPYT-------SPEAQVDTPPVILNNSPQLSVAKEGQSV-QLECHAE-GHPIPTISWRRENNAILPNGQ 120 (232)
Q Consensus 53 ---~~~~~~~~~~~~-------~~~l~v~~~p~~~~~~~~~~~~~~g~~~-~l~C~~~-~~~~~~~~W~~~~~~~~~~~~ 120 (232)
+.|.|.|..... .+.|.|..+|.+....... . ..|+.+ .|.|.+. +.|.+.+.|++++........
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~-~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~ 163 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKV-Q-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQ 163 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECC-C-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEE
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCc-c-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccce
Confidence 012455544221 4566676666654311111 1 467788 5999987 788889999987544321111
Q ss_pred -------EEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 121 -------TIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 121 -------~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.....+.|.|..+..+|.|.|+|.+.|..+.
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~ 201 (221)
T 3eow_R 164 VPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFE 201 (221)
T ss_dssp ECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSS
T ss_pred eecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCC
Confidence 1112246899999999999999999997654
No 355
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.50 E-value=1.9e-13 Score=103.47 Aligned_cols=104 Identities=19% Similarity=0.272 Sum_probs=65.9
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC----cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG----QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRK 156 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~----~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~ 156 (232)
+....+.+|+.+.|.|.+.| |.+.+.|++++....... +....++.|.|.+++.+|+|.|+|.+.|..|. ....
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~-~~~~ 330 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSVRNGDLFFKKVQVEDGGVYTCYAMGETFN-ETLS 330 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEEETTEEEESSCCTTSCEEEEEEEECSSCE-EEEE
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEeecCeEEEeecCcccCEEEEEEEecCCCc-cEEE
Confidence 44567889999999999998 889999999876543221 33446778999999999999999999998766 5566
Q ss_pred EEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEE
Q psy15206 157 IEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILY 197 (232)
Q Consensus 157 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~ 197 (232)
+.+.|...+ ..|+.++|.|.+.|.|.|.|+
T Consensus 331 ~~l~V~~~~-----------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 331 VELKVYNFT-----------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEEESSC-----------CC-------------------
T ss_pred EEEEEEeee-----------ccCCceEEEEEeCCCCCCccc
Confidence 667664322 578899999999999998764
No 356
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.50 E-value=2.1e-14 Score=102.08 Aligned_cols=137 Identities=13% Similarity=0.230 Sum_probs=76.8
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcE--------------------------------------
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK-------------------------------------- 52 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~-------------------------------------- 52 (232)
..+.+... |.++.+.+|++++|.|.+.+.+.+.+.|+|+..
T Consensus 22 ~~~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 100 (233)
T 3bqu_C 22 AETTVTQS-PASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENM 100 (233)
T ss_dssp -CCCEEEE-CSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC----
T ss_pred cceeEEEc-CCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCC
Confidence 34556555 778889999999999999987777899998321
Q ss_pred ---eeeeEEEEeeee-------cCceeecC---CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEEeCCeeeCC
Q psy15206 53 ---RLGRLHLAIPYT-------SPEAQVDT---PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWRRENNAILP 117 (232)
Q Consensus 53 ---~~~~~~~~~~~~-------~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~~~ 117 (232)
+.|.|.|..... ...|.|.. +|.+....+. .....|+.+.|.|.+.+. |.+ .+.|+++|..+..
T Consensus 101 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~ 179 (233)
T 3bqu_C 101 LSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 179 (233)
T ss_dssp -CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----C
T ss_pred CHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCC-HHhhcCCceEEEEEEccccCCceEEEEEECCeeCCC
Confidence 013555544221 22445543 3333321222 122368899999999884 443 6999999876543
Q ss_pred C-Cc----------EEeeCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 118 N-GQ----------TIFTGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 118 ~-~~----------~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
. .. .....+.|.|..+..+|.|.|+|.+.|..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~ 222 (233)
T 3bqu_C 180 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKT 222 (233)
T ss_dssp CEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC-
T ss_pred CceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCC
Confidence 3 00 01112368888888899999999999864
No 357
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=3.5e-13 Score=82.64 Aligned_cols=88 Identities=20% Similarity=0.312 Sum_probs=68.6
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe---eC--CeEEECCCCCCCCeEEEEEeEe
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF---TG--STLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~---~~--~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....+... .. ..|.|.++..+|.|.|+|.+.|
T Consensus 5 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 5 APKIFE-RIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCceEe-cCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 444443 56667888999999999999999999999999988765544332 22 3799999999999999999999
Q ss_pred CCCCceeeEEEEEEE
Q psy15206 148 GIGRGARRKIEVKVE 162 (232)
Q Consensus 148 ~~~~~~~~~~~l~v~ 162 (232)
..|. ....+.+.|.
T Consensus 84 ~~g~-~~~~~~l~V~ 97 (99)
T 1g1c_A 84 IAGE-TSSHAFLLVQ 97 (99)
T ss_dssp TTEE-EEEEEEEEEE
T ss_pred CCCc-EEEEEEEEEe
Confidence 8876 4455566554
No 358
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.50 E-value=3e-13 Score=96.83 Aligned_cols=135 Identities=19% Similarity=0.245 Sum_probs=87.6
Q ss_pred CeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeC--------------c---------------------------
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRN--------------F--------------------------- 51 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~--------------~--------------------------- 51 (232)
+.++.. +.++.+.+|++++|.| ..+.+.+.+.|+|. +
T Consensus 3 ~~v~~~-p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 80 (245)
T 4ei6_B 3 PKVLQI-PSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKI 80 (245)
T ss_dssp CCCEEE-CSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEE
T ss_pred cceEeC-CceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEE
Confidence 445555 6778899999999999 66678889999981 0
Q ss_pred -----EeeeeEEEEeee----------ecCceeec------CCcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEE
Q psy15206 52 -----KRLGRLHLAIPY----------TSPEAQVD------TPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISW 108 (232)
Q Consensus 52 -----~~~~~~~~~~~~----------~~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W 108 (232)
.+.|.|.|.... ....|.|. .+|......+....+..|+.+.|.|.+.+ .|.+ .+.|
T Consensus 81 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W 160 (245)
T 4ei6_B 81 QPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 160 (245)
T ss_dssp CSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEE
Confidence 011355565531 12344554 23433322333333445899999999988 4444 7999
Q ss_pred EeCCeeeCCCCc---------------EEeeCCeEEECCCCCCC-CeEEEEEeEeCC
Q psy15206 109 RRENNAILPNGQ---------------TIFTGSTLQIPRITKED-RGAYYCVAQNGI 149 (232)
Q Consensus 109 ~~~~~~~~~~~~---------------~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~ 149 (232)
+++|..+..... .....+.|.|.....+| .|.|+|.+.+..
T Consensus 161 ~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~ 217 (245)
T 4ei6_B 161 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (245)
T ss_dssp EETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECC
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECC
Confidence 999987753211 11112347788887777 899999999864
No 359
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.50 E-value=1.4e-13 Score=96.86 Aligned_cols=130 Identities=20% Similarity=0.333 Sum_probs=82.6
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCc--Ee------------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNF--KR------------------------------------------ 53 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~--~~------------------------------------------ 53 (232)
+.++.+.+|++++|.|.+.+.+ .+.+.|+|+. ..
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 5678899999999999999764 6899999851 10
Q ss_pred ----eeeEEEEeeee----------cCceeecCC----cEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeCCe
Q psy15206 54 ----LGRLHLAIPYT----------SPEAQVDTP----PVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRENN 113 (232)
Q Consensus 54 ----~~~~~~~~~~~----------~~~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~ 113 (232)
.|.|.|..... ...|.|... |.+....+ ...+..|+.+.|.|.+.+ .|.+ .+.|++++.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 165 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAP-GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECC-CSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecC-ccccccCCeEEEEEEcccccCCCeEEEEEeCCc
Confidence 02444443221 223455432 33322121 123457999999999998 8888 999999987
Q ss_pred eeCC--CCc-----EEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 114 AILP--NGQ-----TIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 114 ~~~~--~~~-----~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.+.. ... .....+.|.|..... |.|.|+|.+.|..+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~ 209 (219)
T 1c1e_H 166 SSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASS 209 (219)
T ss_dssp CTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGT
T ss_pred ccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCC
Confidence 5311 000 011123688844444 569999999997654
No 360
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.49 E-value=1.2e-13 Score=100.03 Aligned_cols=146 Identities=16% Similarity=0.285 Sum_probs=86.8
Q ss_pred ceEeecCCcEEEEeeeccCC--CCeEEEEeCC--ee---e---C----------CCCcEEee------CCeEEECCCCCC
Q psy15206 83 LSVAKEGQSVQLECHAEGHP--IPTISWRREN--NA---I---L----------PNGQTIFT------GSTLQIPRITKE 136 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~---~---~----------~~~~~~~~------~~~l~i~~~~~~ 136 (232)
...+.+|+++.|.|...+.. ...+.|++.. .. + . ...++... ..+|.|.+++.+
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (263)
T 3iu4_H 9 PGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTD 88 (263)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGG
T ss_pred CEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHH
Confidence 35677899999999987533 4579999742 11 0 0 01222221 124999999999
Q ss_pred CCeEEEEEeEeCCC-------CceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecCCC--CeEEEeeCCE
Q psy15206 137 DRGAYYCVAQNGIG-------RGARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAYPH--PILYWAKDGE 203 (232)
Q Consensus 137 ~~g~y~C~~~~~~~-------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~g~ 203 (232)
|+|.|.|.+.+... ........+.|. .+|.+........+..|+.++|.|.+.++++ +.+.| ++.
T Consensus 89 DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W--~~~ 166 (263)
T 3iu4_H 89 DTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW--NSG 166 (263)
T ss_dssp GCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE--GGG
T ss_pred HCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE--CCc
Confidence 99999999987531 001122345553 3566654333334558999999999988543 57999 332
Q ss_pred Ee-----------cCCCeE----EEEEeccccCCceEEEEecC
Q psy15206 204 IV-----------VNDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 204 ~~-----------~~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+ ..+..| .+.+......| |.|+|.|.
T Consensus 167 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~ 208 (263)
T 3iu4_H 167 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 208 (263)
T ss_dssp TBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEE
T ss_pred ccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEE
Confidence 21 122333 34444555567 99999874
No 361
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.49 E-value=2.1e-13 Score=98.34 Aligned_cols=146 Identities=22% Similarity=0.362 Sum_probs=87.5
Q ss_pred ceEeecCCcEEEEeeeccCC--CCeEEEEeCC--ee---e--------------CCCCcEEee------CCeEEECCCCC
Q psy15206 83 LSVAKEGQSVQLECHAEGHP--IPTISWRREN--NA---I--------------LPNGQTIFT------GSTLQIPRITK 135 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~---~--------------~~~~~~~~~------~~~l~i~~~~~ 135 (232)
...+.+|+++.|.|...+.. ...+.|++.. .. + ....++... ..+|.|.+++.
T Consensus 32 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 111 (256)
T 3sob_H 32 GGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRA 111 (256)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred cEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCc
Confidence 34677899999999986532 3569999742 11 0 001222221 12499999999
Q ss_pred CCCeEEEEEeEeCCC---------C-ceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEEeecC-C-CCeEEEe
Q psy15206 136 EDRGAYYCVAQNGIG---------R-GARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCHIEAY-P-HPILYWA 199 (232)
Q Consensus 136 ~~~g~y~C~~~~~~~---------~-~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~~~W~ 199 (232)
+|+|.|.|.+.+..+ . .......+.|. .+|.+........+..|+.++|.|.+.+. | ...+.|
T Consensus 112 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~W- 190 (256)
T 3sob_H 112 EDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW- 190 (256)
T ss_dssp GGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEEEE-
T ss_pred ccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEEEE-
Confidence 999999999986421 0 01122345553 35566543333345689999999999874 4 336999
Q ss_pred eCCEEe-----------cCCCeE----EEEEeccccCCceEEEEecC
Q psy15206 200 KDGEIV-----------VNDEYH----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 200 ~~g~~~-----------~~~~~~----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|..+ ..+..| .+.+......| |.|+|.|.
T Consensus 191 -~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~ 235 (256)
T 3sob_H 191 -NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 235 (256)
T ss_dssp -GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEE
T ss_pred -CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEE
Confidence 43222 122333 34455566678 99999874
No 362
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.49 E-value=5e-13 Score=96.84 Aligned_cols=136 Identities=21% Similarity=0.374 Sum_probs=89.4
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecCCC------CCeEEEEeCc--E--e-------------ee------------
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEGHP------IPTISWRRNF--K--R-------------LG------------ 55 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p------~~~~~W~~~~--~--~-------------~~------------ 55 (232)
..+.++.. |.++.+.+|++++|.|.+.+.+ .+.+.|+|+. . . .+
T Consensus 4 ~~~~v~q~-p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~ 82 (264)
T 2gjj_A 4 ADIVLTQT-PSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFT 82 (264)
T ss_dssp CCCCEEEE-CSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE
T ss_pred cccceEec-CCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEE
Confidence 34566666 7788999999999999999876 6789999831 1 0 11
Q ss_pred ------------eEEEEeeee-------cCceeecCCc-------------------EEecCCCCceEeecCCcEEEEee
Q psy15206 56 ------------RLHLAIPYT-------SPEAQVDTPP-------------------VILNNSPQLSVAKEGQSVQLECH 97 (232)
Q Consensus 56 ------------~~~~~~~~~-------~~~l~v~~~p-------------------~~~~~~~~~~~~~~g~~~~l~C~ 97 (232)
.|.|..... ...|.|..++ ..+. .+....+.+|+++.|.|.
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~G~~v~L~C~ 161 (264)
T 2gjj_A 83 LTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQ-QSGPEVVKTGASVKISCK 161 (264)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEE-ECCCEEECTTCCEEEEEE
T ss_pred EEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEe-CCCCEEEcCCCcEEEEEE
Confidence 333332110 2346665542 1111 122346788999999999
Q ss_pred eccCCC--CeEEEEeCC--ee---eC---C-----------CCcEEee------CCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 98 AEGHPI--PTISWRREN--NA---IL---P-----------NGQTIFT------GSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 98 ~~~~~~--~~~~W~~~~--~~---~~---~-----------~~~~~~~------~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
+.+.+. +.+.|+++. .. +. . ..++... ...|.|.+++.+|+|.|+|.+.+.
T Consensus 162 ~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 162 ASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 988764 689999863 21 10 0 1222221 247999999999999999999985
No 363
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.49 E-value=1.9e-13 Score=96.34 Aligned_cols=130 Identities=20% Similarity=0.303 Sum_probs=84.1
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCcE--e----------------------e-------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNFK--R----------------------L------------------- 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~~--~----------------------~------------------- 54 (232)
+.++.+.+|++++|.|.+.+.+ .+.+.|+|+.. . .
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 5678899999999999999765 68999998420 0 0
Q ss_pred -------eeEEEEeee---------ecCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEEeCC
Q psy15206 55 -------GRLHLAIPY---------TSPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWRREN 112 (232)
Q Consensus 55 -------~~~~~~~~~---------~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~ 112 (232)
|.|.|.... ....|.|.. +|.+....+ ...+.+|+.+.|.|.+.|. |.+ .+.|++++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 165 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVP-GCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGA 165 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECC-CSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEccc-ccccCCCCcEEEEEEEEEEeCCCeEEEEecCC
Confidence 133333311 123444432 233322111 1234579999999999986 878 89999988
Q ss_pred ee----eCCC---CcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 113 NA----ILPN---GQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 113 ~~----~~~~---~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.. .... .......+.|.|..+..++ |.|+|.+.|..+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 210 (220)
T 1pz5_B 166 LSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASK 210 (220)
T ss_dssp CCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGT
T ss_pred cccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCcc
Confidence 63 1110 0122234568888888866 9999999998765
No 364
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.49 E-value=1.1e-13 Score=97.58 Aligned_cols=130 Identities=22% Similarity=0.329 Sum_probs=83.8
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCc--Ee----------------------e-------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNF--KR----------------------L------------------- 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~--~~----------------------~------------------- 54 (232)
+.++.+.+|++++|.|.+.+.+ .+.+.|+|+. .. .
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 5677899999999999999755 6789999831 00 0
Q ss_pred -------eeEEEEeeee-----------cCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEEe
Q psy15206 55 -------GRLHLAIPYT-----------SPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWRR 110 (232)
Q Consensus 55 -------~~~~~~~~~~-----------~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~ 110 (232)
|.|.|..... ...|.|.. +|.+....+. ..+..|+.+.|.|.+.|. |.+ .+.|++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 165 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNS 165 (222)
T ss_dssp SCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCC-SCCCCSSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred cCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEcccc-ccccCCCcEEEEEEEccEECCCCEEEEec
Confidence 2344433211 12344432 2333221111 124478999999999885 777 899999
Q ss_pred CCeeeCCC-------CcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 111 ENNAILPN-------GQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 111 ~~~~~~~~-------~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
++..+... .......+.|.|..+...| |.|+|.+.|..+.
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~ 212 (222)
T 1q9r_B 166 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 212 (222)
T ss_dssp GTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred CCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCC
Confidence 88654211 0111122468899999889 9999999997665
No 365
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.49 E-value=4.6e-13 Score=81.12 Aligned_cols=87 Identities=26% Similarity=0.396 Sum_probs=66.5
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCC--eeeCCCCcEEe--eCCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRREN--NAILPNGQTIF--TGSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~--~~~~~~~~~~~--~~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
+|.+.. .+....+..|+.+.|.|.+.|.|.|.+.|++++ ..+........ ..+.|.|.++..+|+|.|+|.+.|.
T Consensus 2 ~P~i~~-~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 80 (93)
T 1wit_A 2 KPKILT-ASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNE 80 (93)
T ss_dssp CCEECC-CCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEET
T ss_pred CCeEEc-CCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcC
Confidence 455533 456678889999999999999999999999999 66644332222 2357999999999999999999998
Q ss_pred CCCceeeEEEEEE
Q psy15206 149 IGRGARRKIEVKV 161 (232)
Q Consensus 149 ~~~~~~~~~~l~v 161 (232)
.|. ....+.+.|
T Consensus 81 ~G~-~~~~~~l~V 92 (93)
T 1wit_A 81 LGE-DEAIFEVIV 92 (93)
T ss_dssp TEE-EEEEEEEEE
T ss_pred CCe-EEEEEEEEE
Confidence 886 445555554
No 366
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.49 E-value=1.8e-13 Score=82.63 Aligned_cols=68 Identities=16% Similarity=0.155 Sum_probs=60.0
Q ss_pred ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeEEEEEeccccCCceEEEEecC
Q psy15206 164 APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 164 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
++.+...|....+..|+.+.|.|.+.|.|.+.+.|+|+|..+.......+.+.++...|+|.|.|.|.
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 70 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVY 70 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCSSEEEESSCCGGGCEEEEEEEE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCCCeEEECCCCHHhCEEEEEEEE
Confidence 35566677777888999999999999999999999999999887777788899999999999999874
No 367
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.48 E-value=7.4e-13 Score=96.15 Aligned_cols=136 Identities=15% Similarity=0.321 Sum_probs=86.1
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecCCC-----CCeEEEEeCc--Ee---------------e--------------
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEGHP-----IPTISWRRNF--KR---------------L-------------- 54 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p-----~~~~~W~~~~--~~---------------~-------------- 54 (232)
..+.++.. |..+.+.+|++++|.|.+.+.+ .+.+.|+|+. .. .
T Consensus 14 ~~~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L 92 (268)
T 1x9q_A 14 SDVVMTQT-PLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTL 92 (268)
T ss_dssp CCCCEEEE-CSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEE
T ss_pred ccceEEee-CCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEE
Confidence 34566655 7788899999999999998866 5789999832 00 1
Q ss_pred ----------eeEEEEeeee-------cCceeecCCcE-----------------------EecCCCCceEeecCCcEEE
Q psy15206 55 ----------GRLHLAIPYT-------SPEAQVDTPPV-----------------------ILNNSPQLSVAKEGQSVQL 94 (232)
Q Consensus 55 ----------~~~~~~~~~~-------~~~l~v~~~p~-----------------------~~~~~~~~~~~~~g~~~~l 94 (232)
|.|.|..... ...|.|...+. .+. .+....+.+|+++.|
T Consensus 93 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~-~~~~~~v~~G~~v~L 171 (268)
T 1x9q_A 93 KINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLD-ETGGGLVQPGGAMKL 171 (268)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEE-EECCEEECTTCCEEE
T ss_pred EECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEE-CCCceEecCCCcEEE
Confidence 2333333111 23444443211 111 123456778999999
Q ss_pred EeeeccCCC--CeEEEEeCC--eee-------------------CCCCcEEee------CCeEEECCCCCCCCeEEEEEe
Q psy15206 95 ECHAEGHPI--PTISWRREN--NAI-------------------LPNGQTIFT------GSTLQIPRITKEDRGAYYCVA 145 (232)
Q Consensus 95 ~C~~~~~~~--~~~~W~~~~--~~~-------------------~~~~~~~~~------~~~l~i~~~~~~~~g~y~C~~ 145 (232)
.|.+.+.+. +.+.|+++. ..+ ....++... ...|.|.+++.+|+|.|+|.+
T Consensus 172 ~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 251 (268)
T 1x9q_A 172 SCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTG 251 (268)
T ss_dssp EEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 999987653 689999852 221 012233221 247999999999999999999
Q ss_pred EeC
Q psy15206 146 QNG 148 (232)
Q Consensus 146 ~~~ 148 (232)
.+.
T Consensus 252 ~~~ 254 (268)
T 1x9q_A 252 ASY 254 (268)
T ss_dssp EET
T ss_pred ccC
Confidence 863
No 368
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.48 E-value=1.8e-12 Score=91.82 Aligned_cols=142 Identities=19% Similarity=0.278 Sum_probs=90.2
Q ss_pred CCCceEeecCCcEEEEeeeccCC--CCeEEEEeCC--ee---eC---------CCCcEEee------CCeEEECCCCCCC
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHP--IPTISWRREN--NA---IL---------PNGQTIFT------GSTLQIPRITKED 137 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~--~~~~~W~~~~--~~---~~---------~~~~~~~~------~~~l~i~~~~~~~ 137 (232)
.+....+.+|+++.|.|.+.+.+ ...+.|++.. .. +. ...++... ..+|.|.+++.+|
T Consensus 7 ~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 86 (229)
T 1hxm_A 7 EHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERD 86 (229)
T ss_dssp SCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGG
T ss_pred CCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhH
Confidence 35566788999999999987544 3579999853 11 10 12333322 1379999999999
Q ss_pred CeEEEEEeEeCC------CC-ceeeEEEEEEEe------ccEEEeccceeeeeccCeEEEEEEeecCC-CC-eEEEeeCC
Q psy15206 138 RGAYYCVAQNGI------GR-GARRKIEVKVEF------APIVTVQSTRIGQALHHDMDLDCHIEAYP-HP-ILYWAKDG 202 (232)
Q Consensus 138 ~g~y~C~~~~~~------~~-~~~~~~~l~v~~------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~-~~~W~~~g 202 (232)
.|.|.|.+.+.. .. .......|.|.. +|.+... . ..+.|.|.+.|+. .+ .+.|+++
T Consensus 87 sg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~~-------~-~~~~L~C~~~g~~P~~i~v~W~~~- 157 (229)
T 1hxm_A 87 EGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFVM-------K-NGTNVACLVKEFYPKDIRINLVSS- 157 (229)
T ss_dssp CEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEEE-------E-ETTEEEEEEESCBSSCCEEEEECS-
T ss_pred CeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEEc-------C-CCCeEEEEEEEEeCCCEEEEEecC-
Confidence 999999998752 11 111234555653 3433321 1 1258999998864 43 7999998
Q ss_pred EEec---------CCCeEEEEEeccccCCceEEEEecC
Q psy15206 203 EIVV---------NDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 203 ~~~~---------~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+. .++.|.+... ....|.|.|+|.|.
T Consensus 158 ~~~~~~~~~~~~~~dg~y~~~~~-~~~~~~~~ytC~V~ 194 (229)
T 1hxm_A 158 KKITEFDPAIVISPSGKYNAVKL-GKYEDSNSVTCSVQ 194 (229)
T ss_dssp SEEEECCCEEEECTTSSEEEEEE-EEETTTTTCEEEEE
T ss_pred CEEecCccceEECCCCcEEEEEC-cccCCCCcEEEEEE
Confidence 5543 2345655522 23367899999874
No 369
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=2.8e-13 Score=83.11 Aligned_cols=91 Identities=27% Similarity=0.464 Sum_probs=69.3
Q ss_pred eecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe-eCCeEEECCCCCCCCeEEEEEeEe
Q psy15206 69 QVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF-TGSTLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 69 ~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+........ ....|.|.++..+|.|.|+|.+.|
T Consensus 7 ~~~~~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 85 (99)
T 2yr3_A 7 GMEVAPSFSS-VLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAEN 85 (99)
T ss_dssp CCCEEEEEEE-CCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEEC
T ss_pred CcccCCceee-cCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEE
Confidence 3445566654 46667888999999999999999999999999987754433322 235799999999999999999999
Q ss_pred CCCCceeeEEEEEE
Q psy15206 148 GIGRGARRKIEVKV 161 (232)
Q Consensus 148 ~~~~~~~~~~~l~v 161 (232)
..|. ....+.+.|
T Consensus 86 ~~g~-~~~~~~l~V 98 (99)
T 2yr3_A 86 ALGQ-VSCSAWVTV 98 (99)
T ss_dssp SSCE-EEEECCEEE
T ss_pred CCCe-EEEEEEEEE
Confidence 8876 444444443
No 370
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.48 E-value=1.2e-12 Score=96.27 Aligned_cols=130 Identities=18% Similarity=0.321 Sum_probs=85.3
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCcE----e------------------e---------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNFK----R------------------L--------------------- 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~~----~------------------~--------------------- 54 (232)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|+.. . .
T Consensus 29 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 108 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSL 108 (291)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSC
T ss_pred CCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcC
Confidence 5678899999999999998766 57899998310 0 0
Q ss_pred -----eeEEEEeeee-----------cCceeecCC---------------cEEecCCCCceEeecCCcEEEEeeeccCCC
Q psy15206 55 -----GRLHLAIPYT-----------SPEAQVDTP---------------PVILNNSPQLSVAKEGQSVQLECHAEGHPI 103 (232)
Q Consensus 55 -----~~~~~~~~~~-----------~~~l~v~~~---------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~ 103 (232)
|.|.|..... ...|.|..+ +..+...+....+.+|+++.|.|.+.+.+.
T Consensus 109 ~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~ 188 (291)
T 2gki_A 109 TSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLF 188 (291)
T ss_dssp CGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCE
T ss_pred CHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCccc
Confidence 2333433111 124555441 111222345567889999999999988776
Q ss_pred C------eEEEEeCC--eee---C-C--------CCcEEe--e--CCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 104 P------TISWRREN--NAI---L-P--------NGQTIF--T--GSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 104 ~------~~~W~~~~--~~~---~-~--------~~~~~~--~--~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
+ .+.|+++. ..+ . . ..++.. . ..+|.|.++..+|+|.|+|.+.+..
T Consensus 189 ~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 189 NSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp ETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred cccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 5 89999963 211 0 0 122221 1 2379999999999999999999853
No 371
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=2.7e-13 Score=83.09 Aligned_cols=69 Identities=14% Similarity=0.169 Sum_probs=58.0
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe----------EEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY----------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+|+|..+....+ ..|.+.++..+|+|.|+|.|.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAI 82 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEE
Confidence 356777777888899999999999999999999999999988765433 357778888999999999874
No 372
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.47 E-value=8.1e-13 Score=80.93 Aligned_cols=88 Identities=24% Similarity=0.472 Sum_probs=68.4
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeC----CeEEECCCCCCCCeEEEEEeEeC
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTG----STLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~----~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+..... ..|.|.++..+|.|.|.|.+.|.
T Consensus 6 ~P~i~~-~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 6 KPVIVT-GLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEEE-CCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCEEEe-cCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 444443 4566788899999999999999999999999998876555543321 26999999999999999999998
Q ss_pred CCCceeeEEEEEEE
Q psy15206 149 IGRGARRKIEVKVE 162 (232)
Q Consensus 149 ~~~~~~~~~~l~v~ 162 (232)
.|. ....+.+.|.
T Consensus 85 ~g~-~~~~~~l~V~ 97 (99)
T 3puc_A 85 AGS-VSSSCKLTIK 97 (99)
T ss_dssp TEE-EEEEEEEEEE
T ss_pred CCc-EeEEEEEEEE
Confidence 776 4555555553
No 373
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.47 E-value=3.7e-13 Score=95.34 Aligned_cols=130 Identities=21% Similarity=0.282 Sum_probs=79.8
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCc--Ee--------------------ee--------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNF--KR--------------------LG-------------------- 55 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~--~~--------------------~~-------------------- 55 (232)
+.++.+.+|++|+|.|.+.+.+ .+.+.|+|+. .. .+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (227)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC
Confidence 5678899999999999999866 6789999842 00 01
Q ss_pred ------eEEEEeee-------ecCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEEeCCeeeC
Q psy15206 56 ------RLHLAIPY-------TSPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWRRENNAIL 116 (232)
Q Consensus 56 ------~~~~~~~~-------~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~~ 116 (232)
.|.|.... ....|.|.. +|.+....+. ..+..|+.+.|.|.+.|. |.+ .+.|++++..+.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 165 (227)
T 1mju_H 87 TSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPV-CGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSG 165 (227)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCC-C------CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred CcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCC-ccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCC
Confidence 23332211 023455543 2333321222 234578999999999884 666 899999886531
Q ss_pred C--CC-----cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 117 P--NG-----QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 117 ~--~~-----~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
. .. ......+.|.|..+..+| |.|+|.+.|....
T Consensus 166 ~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 206 (227)
T 1mju_H 166 VHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 206 (227)
T ss_dssp EEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGT
T ss_pred cEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCC
Confidence 0 00 111223568898988878 9999999996543
No 374
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.47 E-value=3.7e-13 Score=97.67 Aligned_cols=137 Identities=18% Similarity=0.209 Sum_probs=88.0
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCc--E-------------------------------------
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNF--K------------------------------------- 52 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~--~------------------------------------- 52 (232)
.+.++.. +.++.+.+|++++|.|.+. .+.+.+.|+|.. .
T Consensus 26 ~~~v~~~-p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (268)
T 3pl6_D 26 GAGVSQT-PSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLK 103 (268)
T ss_dssp -SSCBCC-CSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEE
T ss_pred CceeEeC-CCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEE
Confidence 4555555 7778899999999999987 477899999810 0
Q ss_pred -------eeeeEEEEeeee--------cCceeecC------CcEEecCCCCceEeecCCcEEEEeeeccCCCC--eEEEE
Q psy15206 53 -------RLGRLHLAIPYT--------SPEAQVDT------PPVILNNSPQLSVAKEGQSVQLECHAEGHPIP--TISWR 109 (232)
Q Consensus 53 -------~~~~~~~~~~~~--------~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~~~W~ 109 (232)
+.|.|.|..... ...|.|.. +|......+....+..|+.+.|.|.+.+.+++ .+.|+
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 183 (268)
T 3pl6_D 104 IQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 183 (268)
T ss_dssp ECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred ECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEE
Confidence 113555554320 22444443 34333223333334458999999999885544 79999
Q ss_pred eCCeeeCCCC---------------cEEeeCCeEEECCCCCCC-CeEEEEEeEeCCC
Q psy15206 110 RENNAILPNG---------------QTIFTGSTLQIPRITKED-RGAYYCVAQNGIG 150 (232)
Q Consensus 110 ~~~~~~~~~~---------------~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~~ 150 (232)
++|..+.... ......+.|.+......| .|.|+|.+.+...
T Consensus 184 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l 240 (268)
T 3pl6_D 184 VNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 240 (268)
T ss_dssp ESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred ECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCC
Confidence 9998774321 111112356777777777 9999999998643
No 375
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.47 E-value=1.6e-12 Score=79.80 Aligned_cols=83 Identities=25% Similarity=0.466 Sum_probs=66.5
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCc--EEe-eC--CeEEECCCCCCCCeEEEEEeEeCCCCcee
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQ--TIF-TG--STLQIPRITKEDRGAYYCVAQNGIGRGAR 154 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~--~~~-~~--~~l~i~~~~~~~~g~y~C~~~~~~~~~~~ 154 (232)
.+....+..|+.+.|.|.+.|.|.+.+.|++++..+..... ... .. ..|.|.++...|.|.|+|.+.|..|. ..
T Consensus 11 ~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~ 89 (100)
T 2kdg_A 11 VPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGE-AT 89 (100)
T ss_dssp CCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEE-EE
T ss_pred CCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCe-EE
Confidence 56667888999999999999999999999999988765432 222 22 27999999999999999999998877 55
Q ss_pred eEEEEEEEe
Q psy15206 155 RKIEVKVEF 163 (232)
Q Consensus 155 ~~~~l~v~~ 163 (232)
..+.|.|..
T Consensus 90 ~~~~l~V~~ 98 (100)
T 2kdg_A 90 FTVQLDVLA 98 (100)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEe
Confidence 666766654
No 376
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.47 E-value=6.6e-13 Score=83.86 Aligned_cols=93 Identities=29% Similarity=0.474 Sum_probs=72.5
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC-CCcEEee--C-C--eEEECCCCCCCCeEEEEEe
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP-NGQTIFT--G-S--TLQIPRITKEDRGAYYCVA 145 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~-~~~~~~~--~-~--~l~i~~~~~~~~g~y~C~~ 145 (232)
.+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.. ..+.... . + .|.|.++..+|.|.|+|.+
T Consensus 14 ~~p~f~~-~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 14 RAPMFIY-KPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp BCCCBSS-CCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCCeEEe-CCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 3455543 56778889999999999999999999999999988754 2333221 1 1 7999999999999999999
Q ss_pred EeCCCCceeeEEEEEEEeccE
Q psy15206 146 QNGIGRGARRKIEVKVEFAPI 166 (232)
Q Consensus 146 ~~~~~~~~~~~~~l~v~~~p~ 166 (232)
.|..|. ....+.|.|..+|.
T Consensus 93 ~N~~G~-~~~~~~l~V~~~p~ 112 (116)
T 2kkq_A 93 VNEAGV-TTCNTRLDVTARPN 112 (116)
T ss_dssp EETTEE-EEEEEEEEEECCSC
T ss_pred EcCCCe-EEEEEEEEEeCCCC
Confidence 998876 56677788776654
No 377
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.47 E-value=2.7e-12 Score=88.98 Aligned_cols=123 Identities=19% Similarity=0.226 Sum_probs=84.0
Q ss_pred eEeecCCeEEEEEEecCCCCC--eEEEEeCcE----------------------eeeeEEEEeeee------cCceeecC
Q psy15206 23 SVAKEGQSVQLECHAEGHPIP--TISWRRNFK----------------------RLGRLHLAIPYT------SPEAQVDT 72 (232)
Q Consensus 23 ~~~~~G~~v~l~C~~~~~p~~--~~~W~~~~~----------------------~~~~~~~~~~~~------~~~l~v~~ 72 (232)
+.+.+|++++|.|.+ +.|.+ .|+|++... +.|.|.|..... .+.|+|+.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~ 95 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYA 95 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeecccccCcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEEe
Confidence 689999999999999 77767 999998321 113566655222 67888888
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccC-CC----CeEEEEeCCeeeCCCCc---EE---------------eeCCeEE
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGH-PI----PTISWRRENNAILPNGQ---TI---------------FTGSTLQ 129 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~----~~~~W~~~~~~~~~~~~---~~---------------~~~~~l~ 129 (232)
+|......+. ....|+.+ |.|.+.+. |. +.+.|++++..+..... .. ...+.+.
T Consensus 96 ~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~ 172 (210)
T 1gsm_A 96 FPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWR 172 (210)
T ss_dssp CCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEE
T ss_pred cCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEe
Confidence 8865543332 55567888 99999884 63 47999999988743211 11 0112344
Q ss_pred ECCCCCCCCeEEEEEeEeCC
Q psy15206 130 IPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 130 i~~~~~~~~g~y~C~~~~~~ 149 (232)
+.....++.+.|+|.+.+..
T Consensus 173 ~~~~~~D~~~~~tC~a~~~L 192 (210)
T 1gsm_A 173 LPPLGTPVPPALYCQATMRL 192 (210)
T ss_dssp CCCCCSSCCSEEEEEEEEEE
T ss_pred ecCCcccCCceEEEEEEeeC
Confidence 44666666789999999864
No 378
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.46 E-value=4.5e-13 Score=97.89 Aligned_cols=139 Identities=21% Similarity=0.295 Sum_probs=87.7
Q ss_pred CCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcE--------------------------------------
Q psy15206 11 TPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK-------------------------------------- 52 (232)
Q Consensus 11 ~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~-------------------------------------- 52 (232)
..+.++.. +.++.+.+|++++|.|.+.+.+.+.+.|+|+..
T Consensus 23 ~~~~v~~~-p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~s 101 (279)
T 2wbj_D 23 GGAVVSQH-PSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLST 101 (279)
T ss_dssp CCCCEEEE-CSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEE
T ss_pred ccceEEeC-CCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEE
Confidence 35666665 778999999999999999888888999998420
Q ss_pred ---------eeeeEEEEeee------------ecCceeecC------CcEEecCCCCceEeecCCcEEEEeeeccC-CC-
Q psy15206 53 ---------RLGRLHLAIPY------------TSPEAQVDT------PPVILNNSPQLSVAKEGQSVQLECHAEGH-PI- 103 (232)
Q Consensus 53 ---------~~~~~~~~~~~------------~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~- 103 (232)
+.|.|.|.... ....|.|.. +|.+....+....+..|+.+.|.|.+.+. |.
T Consensus 102 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 181 (279)
T 2wbj_D 102 LTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 181 (279)
T ss_dssp EEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSC
T ss_pred EEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCC
Confidence 00244444432 022344432 23222211222223358899999999885 43
Q ss_pred CeEEEEeCCeeeCCCCcE---------------EeeCCeEEECCCCCCC-CeEEEEEeEeCCC
Q psy15206 104 PTISWRRENNAILPNGQT---------------IFTGSTLQIPRITKED-RGAYYCVAQNGIG 150 (232)
Q Consensus 104 ~~~~W~~~~~~~~~~~~~---------------~~~~~~l~i~~~~~~~-~g~y~C~~~~~~~ 150 (232)
+.+.|++++..+...... ....+.|.|......| .|.|+|.+.|...
T Consensus 182 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~ 244 (279)
T 2wbj_D 182 VELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 244 (279)
T ss_dssp EEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCB
T ss_pred cEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCC
Confidence 689999999876432111 1112347777777654 6789999998653
No 379
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=3.7e-13 Score=85.33 Aligned_cols=92 Identities=28% Similarity=0.502 Sum_probs=72.1
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC-CCc-EEeeCCeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP-NGQ-TIFTGSTLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~-~~~-~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
+|.+. ..+....+..|+.+.|.|.+.|.|.+.+.|++++..+.. ..+ ....++.|.|.++..+|.|.|+|.+.|..|
T Consensus 8 pP~i~-~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (118)
T 2eo9_A 8 PPVIR-QGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSG 86 (118)
T ss_dssp SCCCS-BCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSC
T ss_pred CCEEE-cCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCC
Confidence 44443 356667888999999999999999999999999887753 222 234567899999999999999999999887
Q ss_pred CceeeEEEEEEEeccE
Q psy15206 151 RGARRKIEVKVEFAPI 166 (232)
Q Consensus 151 ~~~~~~~~l~v~~~p~ 166 (232)
. ....+.|.|..++.
T Consensus 87 ~-~~~~~~l~V~~~~~ 101 (118)
T 2eo9_A 87 E-ATWSAYIEVQEFGV 101 (118)
T ss_dssp E-EEEECCEEEECCSC
T ss_pred c-EEEEEEEEEEeCCC
Confidence 7 55666777776543
No 380
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=5.7e-13 Score=81.77 Aligned_cols=83 Identities=16% Similarity=0.207 Sum_probs=66.5
Q ss_pred CCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee-C---CeEEECCCCCCCCeEEEEEeEeCCCCcee
Q psy15206 79 NSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT-G---STLQIPRITKEDRGAYYCVAQNGIGRGAR 154 (232)
Q Consensus 79 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~---~~l~i~~~~~~~~g~y~C~~~~~~~~~~~ 154 (232)
..+....+.+|+.+.|.|.+ .|.+.+.|+++|..+....+.... . ..|.|.++..+|.|.|+|.+.|. ...
T Consensus 12 ~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~---~~~ 86 (100)
T 2yuz_A 12 TPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY---NVT 86 (100)
T ss_dssp BCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS---CCC
T ss_pred ccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC---Cee
Confidence 35667788899999999999 688899999999998766554432 2 37999999999999999999987 244
Q ss_pred eEEEEEEEeccE
Q psy15206 155 RKIEVKVEFAPI 166 (232)
Q Consensus 155 ~~~~l~v~~~p~ 166 (232)
....|.|..+|.
T Consensus 87 ~~a~L~V~~~P~ 98 (100)
T 2yuz_A 87 LPAKVHVISGPS 98 (100)
T ss_dssp EEEEEEEECCSC
T ss_pred EEEEEEEeCCCC
Confidence 667778877663
No 381
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.46 E-value=6.8e-13 Score=94.69 Aligned_cols=134 Identities=18% Similarity=0.249 Sum_probs=87.1
Q ss_pred eeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCc------------------------------------------
Q psy15206 14 VILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNF------------------------------------------ 51 (232)
Q Consensus 14 ~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~------------------------------------------ 51 (232)
.++.. +.++.+.+|++++|.|.+.+ +.+.+.|+|..
T Consensus 4 ~v~~~-p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 81 (240)
T 3q5y_A 4 GVVQS-PRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSA 81 (240)
T ss_dssp CCEEE-CSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECS
T ss_pred ccccC-cceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECc
Confidence 34444 67788999999999999986 77899999810
Q ss_pred ---EeeeeEEEEeee---------ecCceeec------CCcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeC
Q psy15206 52 ---KRLGRLHLAIPY---------TSPEAQVD------TPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRE 111 (232)
Q Consensus 52 ---~~~~~~~~~~~~---------~~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~ 111 (232)
.+.|.|.|.... ....|.|. .+|......+....+..|+.+.|.|.+.+ .|.+ .+.|+++
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~ 161 (240)
T 3q5y_A 82 LELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVN 161 (240)
T ss_dssp CCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred CChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEEC
Confidence 011356665531 02334443 23333322333333445889999999988 5555 6899999
Q ss_pred CeeeCCCCcE-----Ee------eCCeEEECCCCCCC-CeEEEEEeEeCC
Q psy15206 112 NNAILPNGQT-----IF------TGSTLQIPRITKED-RGAYYCVAQNGI 149 (232)
Q Consensus 112 ~~~~~~~~~~-----~~------~~~~l~i~~~~~~~-~g~y~C~~~~~~ 149 (232)
|..+...... .. ..+.|.|......| .|.|+|.+.|..
T Consensus 162 g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~ 211 (240)
T 3q5y_A 162 GKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHG 211 (240)
T ss_dssp TEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECC
T ss_pred CEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCC
Confidence 9887542211 11 12348888888888 679999999864
No 382
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.46 E-value=7.6e-12 Score=94.30 Aligned_cols=122 Identities=20% Similarity=0.353 Sum_probs=85.9
Q ss_pred CCCceEeecCCcEEEEeeeccCC--------------CCeEEEEeC--Cee--e--C-C---------C-Cc--E-----
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHP--------------IPTISWRRE--NNA--I--L-P---------N-GQ--T----- 121 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~--------------~~~~~W~~~--~~~--~--~-~---------~-~~--~----- 121 (232)
.+..+.+..|+++.|.|.....+ ...+.|++. ++. + . . . .. +
T Consensus 164 q~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~ 243 (401)
T 3f8u_B 164 HTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDD 243 (401)
T ss_dssp SCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESC
T ss_pred CCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecc
Confidence 34557788999999999975322 246899864 221 1 0 0 0 00 1
Q ss_pred ------EeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEEEeccEEEeccceee-eeccC-eEEEEEEeecC-C
Q psy15206 122 ------IFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKVEFAPIVTVQSTRIG-QALHH-DMDLDCHIEAY-P 192 (232)
Q Consensus 122 ------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~-~~~g~-~~~l~C~~~~~-p 192 (232)
...+.+|.|.+++.+|.|.|.|.+.+..+. ....+.+.|..+|.+...+.... ...|+ .++|.|.+.++ |
T Consensus 244 ~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~-~~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP 322 (401)
T 3f8u_B 244 DEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQ-GQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYP 322 (401)
T ss_dssp CCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEE-EEEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBS
T ss_pred cccccccCCcEEEEECcCCHhhCceEEEEEEecccc-eeEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCcC
Confidence 113458999999999999999999987554 45667888888998877665543 34676 79999999885 5
Q ss_pred C--CeEEEe-eCC
Q psy15206 193 H--PILYWA-KDG 202 (232)
Q Consensus 193 ~--~~~~W~-~~g 202 (232)
. +.+.|. +|+
T Consensus 323 ~~~~~VtW~~rdg 335 (401)
T 3f8u_B 323 SGGLEVEWELRGG 335 (401)
T ss_dssp STTCEEEEEEESS
T ss_pred CCCcEEEEEecCC
Confidence 4 589995 765
No 383
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.46 E-value=2.8e-13 Score=98.50 Aligned_cols=137 Identities=19% Similarity=0.244 Sum_probs=86.6
Q ss_pred CCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcE---------------------------------------
Q psy15206 12 PPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK--------------------------------------- 52 (232)
Q Consensus 12 ~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~--------------------------------------- 52 (232)
.+.++.. +.++.+.+|++++|.|.+.+ +.+.+.|+|...
T Consensus 27 ~~~v~~~-p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~ 104 (270)
T 3qib_D 27 GMKVIQT-PRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLE 104 (270)
T ss_dssp -CCCEEE-CSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEE
T ss_pred ceeEEeC-CCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEE
Confidence 3445544 67788999999999999876 678999998110
Q ss_pred -------eeeeEEEEeee----------ecCceeecC------CcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEE
Q psy15206 53 -------RLGRLHLAIPY----------TSPEAQVDT------PPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TIS 107 (232)
Q Consensus 53 -------~~~~~~~~~~~----------~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~ 107 (232)
+.|.|.|.... ....|.|.. +|.+....+....+..|+.+.|.|.+.+ .|.+ .+.
T Consensus 105 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~ 184 (270)
T 3qib_D 105 IQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELS 184 (270)
T ss_dssp ESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred ECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEE
Confidence 11345554431 122344443 3333221222223345899999999988 5656 799
Q ss_pred EEeCCeeeCCCCc---------------EEeeCCeEEECCCCCCC-CeEEEEEeEeCCC
Q psy15206 108 WRRENNAILPNGQ---------------TIFTGSTLQIPRITKED-RGAYYCVAQNGIG 150 (232)
Q Consensus 108 W~~~~~~~~~~~~---------------~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~~ 150 (232)
|+++|..+..... .....+.|.|.....+| .|.|+|.+.+...
T Consensus 185 W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l 243 (270)
T 3qib_D 185 WWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 243 (270)
T ss_dssp EEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCB
T ss_pred EEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCC
Confidence 9999988753211 11112356777777777 8999999998643
No 384
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=2.2e-13 Score=85.92 Aligned_cols=101 Identities=18% Similarity=0.270 Sum_probs=75.9
Q ss_pred cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee-----CCeEEECCCCCCCCe
Q psy15206 65 SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT-----GSTLQIPRITKEDRG 139 (232)
Q Consensus 65 ~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~~~g 139 (232)
...|.|..+|..+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+.... ...|.|.++..+|.|
T Consensus 4 ~a~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 83 (115)
T 2cr6_A 4 GSSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSG 83 (115)
T ss_dssp CCCCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCE
T ss_pred cEEEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCE
Confidence 345777766644444667788999999999999999998999999999887655433222 247999999999999
Q ss_pred EEEEEeEeCCCCceeeEEEEEEEeccEEEec
Q psy15206 140 AYYCVAQNGIGRGARRKIEVKVEFAPIVTVQ 170 (232)
Q Consensus 140 ~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~ 170 (232)
.|+|.+ +. ......|.|..+|.+...
T Consensus 84 ~Y~C~~----g~-~~~~~~L~V~~~p~~~~~ 109 (115)
T 2cr6_A 84 TIYFEA----GD-QRASAALRVTEKPSVFSR 109 (115)
T ss_dssp EEEEEE----TT-EECCEEEEEECCSSCCSS
T ss_pred EEEEEE----CC-eeEEEEEEEECCCceecc
Confidence 999993 23 445577888877765443
No 385
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.45 E-value=2.6e-12 Score=89.08 Aligned_cols=126 Identities=15% Similarity=0.256 Sum_probs=81.6
Q ss_pred cceEeecCCeEEEEEEecC----CCCCeEEEEeCcEee--------------------------------------eeEE
Q psy15206 21 QLSVAKEGQSVQLECHAEG----HPIPTISWRRNFKRL--------------------------------------GRLH 58 (232)
Q Consensus 21 ~~~~~~~G~~v~l~C~~~~----~p~~~~~W~~~~~~~--------------------------------------~~~~ 58 (232)
.++.+.+|++++|.|.+.+ .+.+.+.|++++... |.|.
T Consensus 2 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 2 IHVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp CEEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEE
T ss_pred ceEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEE
Confidence 3577999999999999963 466789999964332 3555
Q ss_pred EEeeee-----------cCceeecCC---cEEecCCCCceEeecCCcEEEEeeec-cCCCCeEEEEeCCeeeCCCCcEEe
Q psy15206 59 LAIPYT-----------SPEAQVDTP---PVILNNSPQLSVAKEGQSVQLECHAE-GHPIPTISWRRENNAILPNGQTIF 123 (232)
Q Consensus 59 ~~~~~~-----------~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~~~ 123 (232)
|..... .+.|.|..+ |.... .....|+.+.|.|.+. +.|.|.+.|+++|..+........
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~-----~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~ 156 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSISD-----FEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVS 156 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEE-----EECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEE
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCCCCceEe-----ccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEE
Confidence 554321 233444332 11111 1123478899999995 889999999999987754322211
Q ss_pred e--C-CeE---EECCCCCCCCeEEEEEeEeCCCC
Q psy15206 124 T--G-STL---QIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 124 ~--~-~~l---~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
. . +.+ .+..+...|.|.|+|.+.|..+.
T Consensus 157 ~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~ 190 (201)
T 1dr9_A 157 QDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLR 190 (201)
T ss_dssp ECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCC
T ss_pred ecCCCcEEEEEEEEEEEecCCCEEEEEEecCcce
Confidence 1 1 211 22345668999999999998776
No 386
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.45 E-value=2.1e-12 Score=91.20 Aligned_cols=66 Identities=23% Similarity=0.393 Sum_probs=47.9
Q ss_pred eecCCcEEEEeeeccC-CCC-eEEEEe-CCeeeCCC--------CcEEeeCCeEEECCCCC--CCCeEEEEEeEeCCCC
Q psy15206 86 AKEGQSVQLECHAEGH-PIP-TISWRR-ENNAILPN--------GQTIFTGSTLQIPRITK--EDRGAYYCVAQNGIGR 151 (232)
Q Consensus 86 ~~~g~~~~l~C~~~~~-~~~-~~~W~~-~~~~~~~~--------~~~~~~~~~l~i~~~~~--~~~g~y~C~~~~~~~~ 151 (232)
+..|+.+.|.|.+.+. |.+ .+.|++ +|..+... .......+.|.|..... +|.|.|+|.+.|..+.
T Consensus 138 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~ 216 (223)
T 1dee_B 138 SNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGN 216 (223)
T ss_dssp CCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCC
T ss_pred cCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCC
Confidence 3578999999999885 666 899999 77765320 01111234577877766 7889999999998765
No 387
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.45 E-value=1.8e-13 Score=95.61 Aligned_cols=137 Identities=9% Similarity=0.158 Sum_probs=80.7
Q ss_pred CCeeecCCCcceEe--ecCCeEEEEEEecCCC----CCeEEEEeCcEe--------------------------------
Q psy15206 12 PPVILNNSTQLSVA--KEGQSVQLECHAEGHP----IPTISWRRNFKR-------------------------------- 53 (232)
Q Consensus 12 ~P~i~~~~~~~~~~--~~G~~v~l~C~~~~~p----~~~~~W~~~~~~-------------------------------- 53 (232)
+|.+... ++...+ .+|++++|.|.+.+.+ ...+.|+|++..
T Consensus 1 ~P~v~~~-pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d 79 (207)
T 1l6x_A 1 GPSVFLF-PPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLN 79 (207)
T ss_dssp CCEEEEE-CCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHT
T ss_pred CCeEEEe-CcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccC
Confidence 3666666 333333 7999999999999854 359999996532
Q ss_pred eeeEEEEeeeecC------ce----eecCCcEEecCCCCceEeecCCcEEEEeeeccC-CC-CeEEEEeCCeeeCCCCc-
Q psy15206 54 LGRLHLAIPYTSP------EA----QVDTPPVILNNSPQLSVAKEGQSVQLECHAEGH-PI-PTISWRRENNAILPNGQ- 120 (232)
Q Consensus 54 ~~~~~~~~~~~~~------~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~~~~~~~~~~- 120 (232)
.|.|.|....... .+ .+..+|.+....+....+ .+..+.|.|.+.|. |. +.+.|+++|..+.....
T Consensus 80 ~g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 158 (207)
T 1l6x_A 80 GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDEL-TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTT 158 (207)
T ss_dssp TCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEEC
T ss_pred CceEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHh-cCCcEEEEEEEeCeECCCeEEEEEECCeeccCcccc
Confidence 1344444422211 11 223344433222222122 45569999999984 54 38999999987642111
Q ss_pred --EEeeCC------eEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 121 --TIFTGS------TLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 121 --~~~~~~------~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
....++ .|.+......|.|.|+|.+.|...
T Consensus 159 ~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 159 PPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 111222 244444444678999999998653
No 388
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.45 E-value=1.6e-12 Score=88.91 Aligned_cols=147 Identities=13% Similarity=0.175 Sum_probs=95.0
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEV 159 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 159 (232)
.+....+..|+++.|.|......+..+.|...-...... .......+.+.++. +|.+.|.|.+.... ....+.+.+
T Consensus 8 ~P~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~~~--~g~~~~~~~ls~vs-~d~~~~~C~~~c~~-~~~~~~v~l 83 (196)
T 3bn3_B 8 QPRVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQ--RGLRWLARQLVDIR-EPETQPVCFFRCAR-RTLQARGLI 83 (196)
T ss_dssp ESSEEEEETTEEEEEEEEECCSSCSEEEEECSSEEEEEE--EETTEEEEEEEEEC-SSEECCEEEEEETT-EEEEEECEE
T ss_pred cCCCcEEcCCCeEEEEEeCCCCCCCccEEEEccCCeeEc--cccCceEEEEEEEc-cCCCceEEEEECCC-CceEEEEEE
Confidence 345567889999999999864333367885432111000 00011237888888 77777999987643 336678888
Q ss_pred EEEeccE-EEeccceeeeeccCeEEEEEEeecC-CCCe--EEEeeCCEEecCCC------e-----EEEEEeccccCCce
Q psy15206 160 KVEFAPI-VTVQSTRIGQALHHDMDLDCHIEAY-PHPI--LYWAKDGEIVVNDE------Y-----HSISNFGTSEGTTG 224 (232)
Q Consensus 160 ~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~--~~W~~~g~~~~~~~------~-----~~~~~~~~~~~d~g 224 (232)
.|+.+|. +.+.+....+..|+.++|.|.+.+. |... +.|+|++..+.... . ..+.... +.+|.|
T Consensus 84 ~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~~~~~~~~t~~~~~~~-~r~D~g 162 (196)
T 3bn3_B 84 RTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLA-RREDHG 162 (196)
T ss_dssp EEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTSCTTCCCEEEEEEEEC-CGGGTT
T ss_pred EEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccccccccccceeEEEEEee-eeccCC
Confidence 8887664 4455544457899999999999775 4444 89999998764211 1 2333333 335555
Q ss_pred -EEEEecC
Q psy15206 225 -SLQCKVP 231 (232)
Q Consensus 225 -~Y~C~~~ 231 (232)
.|+|+|.
T Consensus 163 ~~~sC~A~ 170 (196)
T 3bn3_B 163 ANFSCRAE 170 (196)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEE
Confidence 9999985
No 389
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.45 E-value=1.4e-12 Score=91.95 Aligned_cols=132 Identities=18% Similarity=0.249 Sum_probs=83.8
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCcE----e------------------ee--------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNFK----R------------------LG-------------------- 55 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~~----~------------------~~-------------------- 55 (232)
+.++.+.+|++++|.|.+.+.+ .+.+.|+|+.. . .+
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 5678899999999999998755 67899998310 0 01
Q ss_pred ------eEEEEeeee---------cCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CC--CeEEEEeCCe
Q psy15206 56 ------RLHLAIPYT---------SPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PI--PTISWRRENN 113 (232)
Q Consensus 56 ------~~~~~~~~~---------~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~--~~~~W~~~~~ 113 (232)
.|.|..... ...|.|.. +|.+.... ...+..|+.+.|.|.+.+. |. +.+.|++++.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~--~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~ 164 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT--LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGK 164 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC--CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCS
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee--cccccCCCcEEEEEEEEeEECCCcEEEEEecCCE
Confidence 233322110 22444442 22222211 1224578999999999885 65 6899999886
Q ss_pred eeCC--CC------cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCce
Q psy15206 114 AILP--NG------QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGA 153 (232)
Q Consensus 114 ~~~~--~~------~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~ 153 (232)
.+.. .. ......+.|.|......|.|.|+|.+.|..+...
T Consensus 165 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 165 DITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp SCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred ecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 5310 00 1111123588888888999999999999877633
No 390
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=9.4e-13 Score=82.35 Aligned_cols=91 Identities=24% Similarity=0.386 Sum_probs=70.0
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC-CCcEEee---CC--eEEECCCCCCCCeEEEEEeE
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP-NGQTIFT---GS--TLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~-~~~~~~~---~~--~l~i~~~~~~~~g~y~C~~~ 146 (232)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++... ++ .|.|.++..+|.|.|+|.+.
T Consensus 8 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm2_A 8 APFFEM-KLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAA 86 (110)
T ss_dssp CCCBSS-CCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEE
T ss_pred CCEEEe-cCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEE
Confidence 444433 45667888999999999999999999999999988754 2333322 22 69999999999999999999
Q ss_pred eCCCCceeeEEEEEEEecc
Q psy15206 147 NGIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p 165 (232)
|..|. ....+.|.|..+|
T Consensus 87 N~~g~-~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 87 NPQGR-ISCTGRLMVQAVN 104 (110)
T ss_dssp CTTCC-EEECCCEEEECCS
T ss_pred ECCCe-EEEEEEEEEECCC
Confidence 98887 4566677776544
No 391
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.45 E-value=1.5e-12 Score=79.15 Aligned_cols=83 Identities=30% Similarity=0.514 Sum_probs=67.4
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEV 159 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 159 (232)
.+....+.+|+.+.|.|.+.+ .+.+.|++++..+....+....++.|.|.++..+|+|.|.|.+.|..|. ....+.+
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l 83 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDS-ETWIFMV 83 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEE
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCCc-EEEEEEE
Confidence 345567789999999999976 5789999999988777677777889999999999999999999998775 5566666
Q ss_pred EEEecc
Q psy15206 160 KVEFAP 165 (232)
Q Consensus 160 ~v~~~p 165 (232)
.|..++
T Consensus 84 ~V~~~~ 89 (95)
T 4hwu_A 84 NVTDAA 89 (95)
T ss_dssp EECCC-
T ss_pred EEeCCc
Confidence 665543
No 392
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.45 E-value=4.4e-13 Score=82.15 Aligned_cols=69 Identities=16% Similarity=0.296 Sum_probs=58.3
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeE---------EEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYH---------SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~---------~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+|+|..+....++ .|.+.++...|+|.|.|.|.
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 82 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVK 82 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEE
Confidence 4567777777888999999999999999999999999999888655444 56777788899999999873
No 393
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=6.2e-13 Score=81.53 Aligned_cols=80 Identities=23% Similarity=0.424 Sum_probs=64.7
Q ss_pred CceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEE
Q psy15206 82 QLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKV 161 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 161 (232)
....+.+|+.+.|.|.+.+.| +.+.|++++..+....+.......|.|.++...|.|.|.|.+.|..+. ....+.+.|
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V 88 (99)
T 2cr3_A 11 ESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGS-DTTYFSVNV 88 (99)
T ss_dssp EECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEE-EEEEEEECB
T ss_pred cCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCce-EEEEEEEEE
Confidence 344567899999999998876 699999999887666666666789999999999999999999998776 445555555
Q ss_pred Ee
Q psy15206 162 EF 163 (232)
Q Consensus 162 ~~ 163 (232)
..
T Consensus 89 ~~ 90 (99)
T 2cr3_A 89 SD 90 (99)
T ss_dssp CS
T ss_pred ec
Confidence 44
No 394
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.44 E-value=2.3e-13 Score=95.20 Aligned_cols=130 Identities=23% Similarity=0.323 Sum_probs=83.5
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCcE--e-------------------e----------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNFK--R-------------------L---------------------- 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~~--~-------------------~---------------------- 54 (232)
+.++.+.+|++++|.|.+.+.+ .+.+.|+|+.. . .
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 5677899999999999999865 47899998420 0 1
Q ss_pred ----eeEEEEeee-----ecCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEEeCCeeeCC--
Q psy15206 55 ----GRLHLAIPY-----TSPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWRRENNAILP-- 117 (232)
Q Consensus 55 ----~~~~~~~~~-----~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~~~-- 117 (232)
|.|.|.... ....|.|.. +|.+....+ ...+..|+.+.|.|.+.+. |.+ .+.|++++..+..
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 165 (210)
T 3d9a_H 87 TEDTATYYCANWDGDYWGQGTLVTVSAAKTTPPSVYPLAP-GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 165 (210)
T ss_dssp GGGCEEEEEEETTSSCBCCCEEEEECCCCCBCCEEEEECC-TTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred cccCEEEEEEEecCcccccceEEEeccCCCCCCEEEEecC-CcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE
Confidence 233333211 023444442 233322121 1234578999999999886 777 8999998865311
Q ss_pred CC-----cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 118 NG-----QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 118 ~~-----~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.. ......+.|.|..+..++ |.|+|.+.|..+.
T Consensus 166 ~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 203 (210)
T 3d9a_H 166 FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 203 (210)
T ss_dssp CCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGT
T ss_pred cCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCC
Confidence 00 111123468888888877 9999999998765
No 395
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.44 E-value=5.6e-13 Score=80.61 Aligned_cols=67 Identities=12% Similarity=0.143 Sum_probs=55.0
Q ss_pred ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EEEEEeccccCCceEEEEecC
Q psy15206 164 APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 164 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|.+...+.+..+..|+.+.|.|.+.+ +.+.+.|+|||..+..+.+ ..|.+.++..+|+|.|+|.|.
T Consensus 5 ~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~ 80 (93)
T 1waa_A 5 LIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAA 80 (93)
T ss_dssp CCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEET
T ss_pred CcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEEC
Confidence 456677778889999999999999976 4578999999998865443 457777888899999999874
No 396
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.44 E-value=5.1e-13 Score=82.51 Aligned_cols=69 Identities=10% Similarity=0.214 Sum_probs=58.5
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+.+..+..|+.+.|.|.+.|.|.|.+.|+|+|..+....+ ..|.+.++...|+|.|.|.|.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 84 (103)
T 3qp3_A 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCT 84 (103)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEE
Confidence 467777778888899999999999999999999999999988765543 456777788899999999873
No 397
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.43 E-value=3.7e-12 Score=77.68 Aligned_cols=82 Identities=23% Similarity=0.337 Sum_probs=65.5
Q ss_pred CCCceEeecCCcEEEEeeeccC-CCCeEEEEeCCeeeCCCCcEEe--eCC--eEEECCCCCCCCeEEEEEeEeCCCCcee
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGH-PIPTISWRRENNAILPNGQTIF--TGS--TLQIPRITKEDRGAYYCVAQNGIGRGAR 154 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~-~~~~~~W~~~~~~~~~~~~~~~--~~~--~l~i~~~~~~~~g~y~C~~~~~~~~~~~ 154 (232)
.+....+.+|+.+.|.|.+.+. |.+.+.|++++..+....+... .++ .|.|.++...|.|.|.|.+.|..|. ..
T Consensus 7 ~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~ 85 (97)
T 2bk8_A 7 QIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGE-DS 85 (97)
T ss_dssp CCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE-EE
T ss_pred cCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCe-Ee
Confidence 4566788899999999999996 8889999999988766555433 333 8999999999999999999998876 44
Q ss_pred eEEEEEEE
Q psy15206 155 RKIEVKVE 162 (232)
Q Consensus 155 ~~~~l~v~ 162 (232)
..+.+.|.
T Consensus 86 ~~~~l~V~ 93 (97)
T 2bk8_A 86 SYAELFVK 93 (97)
T ss_dssp EEEEEEET
T ss_pred EEEEEEEE
Confidence 45555553
No 398
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.43 E-value=7.7e-13 Score=81.06 Aligned_cols=69 Identities=17% Similarity=0.363 Sum_probs=57.6
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC----------eEEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE----------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~----------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+|+|..+.... ...|.+.++...|+|.|+|.|.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAV 82 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEE
Confidence 46777777778888999999999999999999999999998875432 2357778888999999999874
No 399
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.43 E-value=1.5e-12 Score=80.38 Aligned_cols=77 Identities=18% Similarity=0.308 Sum_probs=62.0
Q ss_pred cCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe-----e----CCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 88 EGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF-----T----GSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 88 ~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~-----~----~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
.++.+.|.|.+.|.|.|.+.|+++|..+........ . .+.|.|.++..+|.|.|+|.+.|..|. ....+.
T Consensus 15 ~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~-~~~~~~ 93 (103)
T 1wwb_X 15 SDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGK-DEKQIS 93 (103)
T ss_dssp CCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEEE
T ss_pred ECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCc-EeEEEE
Confidence 577899999999999999999999998866543211 1 234999999999999999999999887 556777
Q ss_pred EEEEecc
Q psy15206 159 VKVEFAP 165 (232)
Q Consensus 159 l~v~~~p 165 (232)
|.|..+|
T Consensus 94 l~V~~~P 100 (103)
T 1wwb_X 94 AHFMGWP 100 (103)
T ss_dssp ECCSCCC
T ss_pred EEECCCC
Confidence 7776555
No 400
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.43 E-value=2.7e-13 Score=83.31 Aligned_cols=69 Identities=17% Similarity=0.270 Sum_probs=57.6
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC----------eEEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE----------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~----------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+|+|..+.... ...|.+.++...|+|.|+|.|.
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAK 82 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEE
Confidence 45666667777888999999999999999999999999998876432 2477788888999999999874
No 401
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.43 E-value=1.9e-12 Score=78.05 Aligned_cols=78 Identities=23% Similarity=0.520 Sum_probs=63.4
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEV 159 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 159 (232)
.+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.... .+.|.|.++..+|.|.|.|.+.|..|...+..+.+
T Consensus 9 ~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l 83 (91)
T 3bfo_A 9 EPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET-----KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEI 83 (91)
T ss_dssp CCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC-----SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEE
T ss_pred CCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC-----CCeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEE
Confidence 4556678899999999999999999999999998765432 35799999999999999999999887644455555
Q ss_pred EEE
Q psy15206 160 KVE 162 (232)
Q Consensus 160 ~v~ 162 (232)
.|.
T Consensus 84 ~V~ 86 (91)
T 3bfo_A 84 IID 86 (91)
T ss_dssp EEC
T ss_pred EEe
Confidence 553
No 402
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.43 E-value=4.1e-13 Score=95.38 Aligned_cols=142 Identities=18% Similarity=0.246 Sum_probs=86.4
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecC-CCC--CeEEEEeCcEee-------------------------------
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEG-HPI--PTISWRRNFKRL------------------------------- 54 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~-~p~--~~~~W~~~~~~~------------------------------- 54 (232)
...+|.+.+.+|....+.+|++++|.|.+.+ .|. ..+.|++++...
T Consensus 9 ~~~~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D 88 (231)
T 2w59_A 9 SCSPIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLS 88 (231)
T ss_dssp ---CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHT
T ss_pred CCCCCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccC
Confidence 3457777655466777889999999999998 463 499999865332
Q ss_pred -eeEEEEeeee----cCceeec------CCcEEecCCCCceEeecCCcEEEEeeeccC-C-CCeEEEEeCCeeeCCCCc-
Q psy15206 55 -GRLHLAIPYT----SPEAQVD------TPPVILNNSPQLSVAKEGQSVQLECHAEGH-P-IPTISWRRENNAILPNGQ- 120 (232)
Q Consensus 55 -~~~~~~~~~~----~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~-~~~~~W~~~~~~~~~~~~- 120 (232)
|.|.|..... .+.+.+. .+|.+....+....+ .+..+.|.|.+.|. | .+.+.|+++|..+.....
T Consensus 89 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~ 167 (231)
T 2w59_A 89 GERFTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFV 167 (231)
T ss_dssp TCCEEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCE
T ss_pred CCEEEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCcccc
Confidence 2344433221 1222222 233332212221112 24579999999985 4 368999999987643211
Q ss_pred ----EE---------------eeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 121 ----TI---------------FTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 121 ----~~---------------~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.. ...+.|.|......|.|.|+|.+.|....
T Consensus 168 ~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 168 TTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp ECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred cCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 01 11135677777777899999999997543
No 403
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.42 E-value=7.7e-13 Score=83.86 Aligned_cols=94 Identities=20% Similarity=0.304 Sum_probs=68.3
Q ss_pred ceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe--------eCCeEEECCCCCCCC
Q psy15206 67 EAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF--------TGSTLQIPRITKEDR 138 (232)
Q Consensus 67 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~--------~~~~l~i~~~~~~~~ 138 (232)
.|.|..+|.+..... .. ..+...|.|.+.|.|.+.+.|+++|..+........ ..+.|.|.++...|.
T Consensus 2 ~L~V~~pP~i~~~~~--~~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 77 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEE--PE--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNN 77 (118)
T ss_dssp --CCCCCCCCCCCCC--CC--CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGC
T ss_pred EEEEecCCceeccCC--Ce--eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcC
Confidence 567777777544211 11 235678899999999999999999988766543322 245799999999999
Q ss_pred eEEEEEeEeCCCCceeeEEEEEEEecc
Q psy15206 139 GAYYCVAQNGIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 139 g~y~C~~~~~~~~~~~~~~~l~v~~~p 165 (232)
|.|.|.+.|..|. ....+.+.|...|
T Consensus 78 G~Y~C~a~N~~G~-~~~~~~l~v~~~P 103 (118)
T 1wwc_A 78 GNYTLIAKNPLGT-ANQTINGHFLKEP 103 (118)
T ss_dssp EEEEEEEEETTEE-EEEEEEECCSCCC
T ss_pred EEEEEEEECCCCe-EeeEEEEEEccCC
Confidence 9999999999887 5556666665554
No 404
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.42 E-value=4.3e-13 Score=95.28 Aligned_cols=131 Identities=15% Similarity=0.195 Sum_probs=82.9
Q ss_pred CcceEeecCCeEEEEEEecCCC-CC-eEEEEeCcE--e---------------------------------------eee
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP-IP-TISWRRNFK--R---------------------------------------LGR 56 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p-~~-~~~W~~~~~--~---------------------------------------~~~ 56 (232)
|.++.+.+|++++|.|.+.+.+ .+ .+.|+|+.. . .|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 5678899999999999998744 33 799998421 0 024
Q ss_pred EEEEeeee---------cCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccCCC--CeEEEEeCCeeeCCCCcE
Q psy15206 57 LHLAIPYT---------SPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGHPI--PTISWRRENNAILPNGQT 121 (232)
Q Consensus 57 ~~~~~~~~---------~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~~~~~~~~~~~~ 121 (232)
|.|..... ...|.|.. +|.+.. .+.......|+.+.|.|.+.+.++ +.+.|+++|..+......
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~-~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 184 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTL-FPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVET 184 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCE-ECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEE
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccc-cCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccc
Confidence 44443211 23444421 222211 111112235889999999988543 379999999876432110
Q ss_pred ----------EeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 122 ----------IFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 122 ----------~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
....+.|.|..+..+|.|.|+|.+.|....
T Consensus 185 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 224 (234)
T 2j6e_L 185 TKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 224 (234)
T ss_dssp CCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBC
T ss_pred cCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCc
Confidence 011236888999999999999999997544
No 405
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.42 E-value=3.1e-12 Score=78.42 Aligned_cols=83 Identities=23% Similarity=0.435 Sum_probs=65.1
Q ss_pred CCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCC--CCcEEee----CCeEEECCCCCCCCeEEEEEeEeCCCCc
Q psy15206 79 NSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILP--NGQTIFT----GSTLQIPRITKEDRGAYYCVAQNGIGRG 152 (232)
Q Consensus 79 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~--~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~~~~~~ 152 (232)
..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++... ...|.|.++..+|.|.|+|.+.|..|.
T Consensus 10 ~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~- 88 (100)
T 3irg_A 10 ALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGS- 88 (100)
T ss_dssp CCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEE-
T ss_pred cCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCc-
Confidence 356667888999999999999999999999999987752 2233222 157999999999999999999998776
Q ss_pred eeeEEEEEEE
Q psy15206 153 ARRKIEVKVE 162 (232)
Q Consensus 153 ~~~~~~l~v~ 162 (232)
....+.+.|.
T Consensus 89 ~~~~~~l~V~ 98 (100)
T 3irg_A 89 DSATVNIHIR 98 (100)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 5555566553
No 406
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.42 E-value=5.3e-13 Score=82.90 Aligned_cols=87 Identities=26% Similarity=0.590 Sum_probs=69.3
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee----CCeEEECCCCCCCCeEEEEEeEeC
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT----GSTLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....+.... ...|.|.++...|.|.|+|.+.|.
T Consensus 14 ~~~i~~-~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 92 (106)
T 1nct_A 14 AARILT-KPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENS 92 (106)
T ss_dssp CCEEEE-CCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCS
T ss_pred CCEEEE-CCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeC
Confidence 444444 566788889999999999999999999999999887655554332 358999999999999999999998
Q ss_pred CCCceeeEEEEEE
Q psy15206 149 IGRGARRKIEVKV 161 (232)
Q Consensus 149 ~~~~~~~~~~l~v 161 (232)
.|. ....+.|.|
T Consensus 93 ~G~-~~~~~~l~V 104 (106)
T 1nct_A 93 EGK-QEAEFTLTI 104 (106)
T ss_dssp SCB-CCEEEEEEE
T ss_pred CCe-EEEEEEEEE
Confidence 877 445566655
No 407
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.42 E-value=4.2e-12 Score=77.73 Aligned_cols=88 Identities=27% Similarity=0.475 Sum_probs=67.0
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcE-Eee-CC---eEEECCCCCCCCeEEEEEeEe
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQT-IFT-GS---TLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~-~~~-~~---~l~i~~~~~~~~g~y~C~~~~ 147 (232)
+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+...... ... .+ .|.|.++..+|.|.|+|.+.|
T Consensus 5 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 5 PPTFKV-SLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEE-CCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEE-cCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 444443 456678889999999999999999999999999887554332 221 22 699999999999999999999
Q ss_pred CCCCceeeEEEEEEE
Q psy15206 148 GIGRGARRKIEVKVE 162 (232)
Q Consensus 148 ~~~~~~~~~~~l~v~ 162 (232)
..|. ....+.|.|.
T Consensus 84 ~~g~-~~~~~~l~V~ 97 (99)
T 1u2h_A 84 EYGA-RQCEARLEVR 97 (99)
T ss_dssp TTEE-EEEEEEEEEE
T ss_pred CCCc-eeEEEEEEEE
Confidence 8876 4455566554
No 408
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.41 E-value=1.4e-12 Score=81.08 Aligned_cols=70 Identities=16% Similarity=0.312 Sum_probs=59.9
Q ss_pred EeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeE---------EEEEeccccCCceEEEEecC
Q psy15206 162 EFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYH---------SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 162 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~---------~~~~~~~~~~d~g~Y~C~~~ 231 (232)
..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+|+|..+....++ .|.+.++...|+|.|.|.|.
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 89 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEE
Confidence 45778887888888999999999999999999999999999887654443 67888889999999999873
No 409
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=6.1e-13 Score=83.19 Aligned_cols=92 Identities=26% Similarity=0.534 Sum_probs=72.1
Q ss_pred CCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe--e---CCeEEECCCCCCCCeEEEEEeE
Q psy15206 72 TPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF--T---GSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 72 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~--~---~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
.+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+........ . ...|.|.++..+|.|.|+|.+.
T Consensus 8 ~~P~i~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 8 FRPHFLQ-APGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCEEEE-CCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCcEEe-CCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 3555554 56677888999999999999999999999999987765443322 1 2379999999999999999999
Q ss_pred eCCCCceeeEEEEEEEecc
Q psy15206 147 NGIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p 165 (232)
|..|. ....+.|.|..+|
T Consensus 87 n~~g~-~~~~~~l~V~~~p 104 (110)
T 2dm3_A 87 NRAGQ-NSFSLELVVAAKE 104 (110)
T ss_dssp CSSCE-EEECCEEEEECCC
T ss_pred CCCCE-EEEEEEEEEeCCC
Confidence 98876 5667777776654
No 410
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.41 E-value=2.9e-12 Score=93.54 Aligned_cols=145 Identities=12% Similarity=0.200 Sum_probs=92.4
Q ss_pred CCceEeecCCcEEEEeeeccCCCC-eEEEEeCCe-eeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIP-TISWRRENN-AILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~-~~~W~~~~~-~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
+....+.+|+++.|.|.... +.+ .+.|...-. ........ ....+.+.++..+ +.|.|.+... +....+.+.
T Consensus 6 P~~~~V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~g~--~~~~~~l~~v~~~--~~y~C~~~~~-~~~~~~~v~ 79 (291)
T 1mq8_A 6 PSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPGN--NRKVYELSNVQED--SQPMCYSNCP-DGQSTAKTF 79 (291)
T ss_dssp CSEEEECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCCCSCS--SEEEEEEESCCSC--CCCEEEEECS-SCEEEEECE
T ss_pred CCccEEcCCCeEEEEEeCCC-CCCccceEEecCCCcccccCCC--ceEEEEEEecccC--CeEEEEEEcC-CccEEEEEE
Confidence 45567889999999999964 444 488864211 11101100 1114677787743 4699999754 334667778
Q ss_pred EEEEeccE-EEeccceeeeeccCeEEEEEEeecCCC-C--eEEEeeCCEEecCCC------eEEEEEeccccCCceEEEE
Q psy15206 159 VKVEFAPI-VTVQSTRIGQALHHDMDLDCHIEAYPH-P--ILYWAKDGEIVVNDE------YHSISNFGTSEGTTGSLQC 228 (232)
Q Consensus 159 l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~-~--~~~W~~~g~~~~~~~------~~~~~~~~~~~~d~g~Y~C 228 (232)
+.|..+|. +.+.+....+..|+.++|.|.+.|.++ . .|.|+|++..+.... ...+........|.+.|.|
T Consensus 80 l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C 159 (291)
T 1mq8_A 80 LTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSC 159 (291)
T ss_dssp EEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCSSSCSSCEEEE
T ss_pred EEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeeeeccCCceEEE
Confidence 88887765 333344345788999999999877544 3 499999997765221 2234444444455569999
Q ss_pred ecC
Q psy15206 229 KVP 231 (232)
Q Consensus 229 ~~~ 231 (232)
+|.
T Consensus 160 ~A~ 162 (291)
T 1mq8_A 160 RTE 162 (291)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
No 411
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.41 E-value=6.4e-12 Score=89.24 Aligned_cols=65 Identities=25% Similarity=0.388 Sum_probs=45.3
Q ss_pred ecC-CcEEEEeeeccC-CCC-eEEEEe-CCeeeCCC--------CcEEeeCCeEEECCCCC--CCCeEEEEEeEeCCCC
Q psy15206 87 KEG-QSVQLECHAEGH-PIP-TISWRR-ENNAILPN--------GQTIFTGSTLQIPRITK--EDRGAYYCVAQNGIGR 151 (232)
Q Consensus 87 ~~g-~~~~l~C~~~~~-~~~-~~~W~~-~~~~~~~~--------~~~~~~~~~l~i~~~~~--~~~g~y~C~~~~~~~~ 151 (232)
..| +.+.|.|.+.+. |.+ .+.|++ +|..+... .......+.|.|..... +|.|.|+|.+.|..+.
T Consensus 138 ~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~ 216 (232)
T 1dn0_B 138 PSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGN 216 (232)
T ss_dssp ---CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCC
T ss_pred CCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCC
Confidence 367 899999999885 766 899999 88765320 01111234688888876 7899999999998765
No 412
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.41 E-value=1.3e-12 Score=83.31 Aligned_cols=91 Identities=24% Similarity=0.301 Sum_probs=65.5
Q ss_pred CCceEeecCCcEEEEeeeccC--CCCeEEEEeCCeeeC-----CC-CcE------EeeCCeEEECCCCCCCCeEEEEEeE
Q psy15206 81 PQLSVAKEGQSVQLECHAEGH--PIPTISWRRENNAIL-----PN-GQT------IFTGSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~--~~~~~~W~~~~~~~~-----~~-~~~------~~~~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
+....+.+|+.+.|.|.+.|. +.+.+.|++++..+. .. ... ....+.|.|.++..+|+|.|+|.+.
T Consensus 15 ~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 94 (122)
T 3s35_X 15 SHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 94 (122)
T ss_dssp CSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEc
Confidence 334577789999999999884 446799999887432 11 111 1234579999999999999999999
Q ss_pred eCCCCceeeEEEEEEEeccEEEeccc
Q psy15206 147 NGIGRGARRKIEVKVEFAPIVTVQST 172 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p~~~~~~~ 172 (232)
|..|. ....+.|.|..+|.+.+.+.
T Consensus 95 n~~g~-~~~~~~l~V~~~p~i~~~p~ 119 (122)
T 3s35_X 95 SGLMT-KKNSTFVRVHEKPFVAFGSG 119 (122)
T ss_dssp CSSCE-EEEEEEEEEEEEECC-----
T ss_pred cCCCc-eEEEEEEEEeccCeEEeecC
Confidence 98887 55788888988888766554
No 413
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.41 E-value=1.1e-11 Score=87.28 Aligned_cols=64 Identities=16% Similarity=0.324 Sum_probs=48.1
Q ss_pred ecCCcEEEEeeecc-CCC--CeEEEEeCCeeeC----------CCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 87 KEGQSVQLECHAEG-HPI--PTISWRRENNAIL----------PNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 87 ~~g~~~~l~C~~~~-~~~--~~~~W~~~~~~~~----------~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
..|+.+.|.|.+.+ .|. +.+.|++++..+. ....+ ...+.|.|.....+|.|.|+|.+.+..+.
T Consensus 136 ~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~-~~~s~L~i~~~~~~d~g~ytC~v~~~~~~ 212 (221)
T 3m8o_H 136 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLY-TTSSQLTLPATQCLAGKSVTCHVKHYTNP 212 (221)
T ss_dssp CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCE-EEEEEEEEEGGGSCTTCEEEEEEEETTSC
T ss_pred ccCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcE-EEEEEEEECHHHcCCCCeEEEEEEECCCC
Confidence 47899999999988 665 3799999886541 11112 22346889999999999999999997654
No 414
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=3.4e-13 Score=82.71 Aligned_cols=71 Identities=17% Similarity=0.308 Sum_probs=60.0
Q ss_pred EEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC------CeEEEEEeccccCCceEEEEecC
Q psy15206 161 VEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND------EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 161 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~------~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+|+|..+... ....|.+.++...|+|.|+|.|.
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 84 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAE 84 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEE
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEE
Confidence 446778877788888999999999999999999999999998776533 34578888999999999999874
No 415
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.41 E-value=2.6e-12 Score=75.96 Aligned_cols=75 Identities=23% Similarity=0.440 Sum_probs=57.9
Q ss_pred CceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee----CCeEEECCCCCCCCeEEEEEeEeCCCCceeeEE
Q psy15206 82 QLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT----GSTLQIPRITKEDRGAYYCVAQNGIGRGARRKI 157 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~ 157 (232)
..+.+.+|+.+.|.|.+.+ |.+.+.|+++|..+....+.... ...|.|.++..+|.|.|.|.+.+. ...+
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~-----~~~a 77 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD-----SRIF 77 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT-----CEEE
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE-----EEEE
Confidence 3467788999999999866 88889999999998766554432 236999999999999999998542 3445
Q ss_pred EEEEE
Q psy15206 158 EVKVE 162 (232)
Q Consensus 158 ~l~v~ 162 (232)
.|.|.
T Consensus 78 ~l~V~ 82 (84)
T 2lu7_A 78 LVSVE 82 (84)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 55554
No 416
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.41 E-value=7e-12 Score=76.58 Aligned_cols=86 Identities=22% Similarity=0.416 Sum_probs=65.6
Q ss_pred cEEecCCCCceEeecCCcEEEEeeec-cCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCCc
Q psy15206 74 PVILNNSPQLSVAKEGQSVQLECHAE-GHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGRG 152 (232)
Q Consensus 74 p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~ 152 (232)
+.+....+....+.+|+.+.|.|.+. +.|.+.+.|++++...... .....++.|.|.++..+|.|.|.|.+.|..|.
T Consensus 10 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~- 87 (98)
T 1gl4_B 10 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS-RAMDFNGILTIRNVQPSDAGTYVCTGSNMFAM- 87 (98)
T ss_dssp EEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCT-TEEEETTEEEECSCCGGGCEEEEEEEECSSCE-
T ss_pred cEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCc-eeecCCCEEEEeCCChhhCEEEEEEecCCCCc-
Confidence 33444455667888999999999998 6888899999976544332 34455678999999999999999999998776
Q ss_pred eeeEEEEEE
Q psy15206 153 ARRKIEVKV 161 (232)
Q Consensus 153 ~~~~~~l~v 161 (232)
....+.+.|
T Consensus 88 ~~~~~~l~V 96 (98)
T 1gl4_B 88 DQGTATLHV 96 (98)
T ss_dssp EEEEEEEEE
T ss_pred cccEEEEEE
Confidence 445555554
No 417
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.40 E-value=1.7e-12 Score=93.41 Aligned_cols=130 Identities=20% Similarity=0.268 Sum_probs=81.4
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEeCcE--------------------------------------------eee
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRRNFK--------------------------------------------RLG 55 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~--------------------------------------------~~~ 55 (232)
+..+.+.+|++++|.|.+.+.+...+.|+|... +.|
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~DsG 87 (253)
T 3to4_D 8 PRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGR 87 (253)
T ss_dssp CSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSCE
T ss_pred CCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhCe
Confidence 567889999999999999888888999998210 113
Q ss_pred eEEEEeeee------------cCceeec------CCcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeCCeee
Q psy15206 56 RLHLAIPYT------------SPEAQVD------TPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRENNAI 115 (232)
Q Consensus 56 ~~~~~~~~~------------~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~~~ 115 (232)
.|.|..... ...|.|. .+|......+....+..|+.+.|.|.+.+ .|.+ .+.|+++|..+
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l 167 (253)
T 3to4_D 88 TLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 167 (253)
T ss_dssp EEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEEC
Confidence 455544211 1133332 22222211111112224688999999988 5666 79999999876
Q ss_pred CCCC---------------cEEeeCCeEEECCCCCCC-CeEEEEEeEeCC
Q psy15206 116 LPNG---------------QTIFTGSTLQIPRITKED-RGAYYCVAQNGI 149 (232)
Q Consensus 116 ~~~~---------------~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~ 149 (232)
.... ......+.|.|......| .|.|+|.+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 168 HSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp CTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred CCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 4321 111112357777777677 679999999864
No 418
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.40 E-value=1.6e-12 Score=82.40 Aligned_cols=77 Identities=19% Similarity=0.313 Sum_probs=62.4
Q ss_pred cCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe-----------eCCeEEECCCCCCCCeEEEEEeEeCCCCceeeE
Q psy15206 88 EGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF-----------TGSTLQIPRITKEDRGAYYCVAQNGIGRGARRK 156 (232)
Q Consensus 88 ~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~-----------~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~ 156 (232)
.+..+.|.|.+.|.|.|.++|+++|..+....+... ..+.|.|.++...|+|.|+|.+.|..|. ....
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~-~~~t 92 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQ-ASAS 92 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCe-EEEE
Confidence 567899999999999999999999998876544211 1257999999999999999999999987 5566
Q ss_pred EEEEEEecc
Q psy15206 157 IEVKVEFAP 165 (232)
Q Consensus 157 ~~l~v~~~p 165 (232)
+.+.|...|
T Consensus 93 ~~l~v~~~P 101 (126)
T 1he7_A 93 IMAAFMDNP 101 (126)
T ss_dssp EEECCCSCT
T ss_pred EEEEEEcCC
Confidence 677666555
No 419
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.40 E-value=7e-13 Score=80.30 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=55.9
Q ss_pred ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCC--EEecCC-------CeEEEEEeccccCCceEEEEecC
Q psy15206 164 APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDG--EIVVND-------EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 164 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g--~~~~~~-------~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+|+| ..+... ....|.+.++...|+|.|+|.|.
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEE
Confidence 466665667778889999999999999999999999999 665432 33567778889999999999874
No 420
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.39 E-value=3e-13 Score=84.30 Aligned_cols=75 Identities=20% Similarity=0.409 Sum_probs=53.1
Q ss_pred EEEEEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC-------eEEEEEeccccCCceEEEEe
Q psy15206 157 IEVKVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE-------YHSISNFGTSEGTTGSLQCK 229 (232)
Q Consensus 157 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~-------~~~~~~~~~~~~d~g~Y~C~ 229 (232)
+.+.+..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+.... ...|.+.++...|+|.|.|.
T Consensus 3 ~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 82 (108)
T 3kvq_A 3 LTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQ 82 (108)
T ss_dssp --------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEE
T ss_pred eeECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEE
Confidence 34556678888877888889999999999999999999999999987765332 34577778888999999999
Q ss_pred cC
Q psy15206 230 VP 231 (232)
Q Consensus 230 ~~ 231 (232)
|.
T Consensus 83 a~ 84 (108)
T 3kvq_A 83 AC 84 (108)
T ss_dssp EC
T ss_pred EE
Confidence 74
No 421
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.39 E-value=9e-13 Score=77.99 Aligned_cols=59 Identities=27% Similarity=0.531 Sum_probs=48.8
Q ss_pred ceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EEEEEeccccCCceEEEEecC
Q psy15206 172 TRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 172 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.++.+..|+++.|.|.+.+ |.|.+.|+|||..+..+.+ ..|.+.++...|+|.|.|.|.
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 71 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAP 71 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECT
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEEC
Confidence 4567889999999999965 8889999999998865443 457777888899999999873
No 422
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.39 E-value=1.2e-12 Score=82.35 Aligned_cols=69 Identities=10% Similarity=0.073 Sum_probs=57.2
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC---------eEEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE---------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~---------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+|+|..+.... ...|.+.++...|+|.|+|.|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVE 83 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEE
Confidence 35667667778889999999999999999999999999997765443 3456777888899999999873
No 423
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=1.9e-13 Score=83.34 Aligned_cols=68 Identities=19% Similarity=0.267 Sum_probs=59.5
Q ss_pred ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeEEEEEeccccCCceEEEEecC
Q psy15206 164 APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 164 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+|+|..+.......|.+.++...|+|.|.|.|.
T Consensus 10 ~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 77 (96)
T 2ens_A 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPSPVLILPEIGPQDQGTYSCVAT 77 (96)
T ss_dssp SCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCCCSEEEEESCCTTTCEEEECEEC
T ss_pred CCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCCEEEECCCCcccCEEEEEEEE
Confidence 45566667777788999999999999999999999999998887777788888999999999999975
No 424
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.39 E-value=4.1e-12 Score=92.15 Aligned_cols=146 Identities=22% Similarity=0.392 Sum_probs=87.7
Q ss_pred ceEeecCCcEEEEeeecc--CCCCeEEEEeCC--ee---e---CC-----------CCcEEee------CCeEEECCCCC
Q psy15206 83 LSVAKEGQSVQLECHAEG--HPIPTISWRREN--NA---I---LP-----------NGQTIFT------GSTLQIPRITK 135 (232)
Q Consensus 83 ~~~~~~g~~~~l~C~~~~--~~~~~~~W~~~~--~~---~---~~-----------~~~~~~~------~~~l~i~~~~~ 135 (232)
...+.+|+++.|.|...+ .....+.|++.. .. + .. ..++... ..+|.|.+++.
T Consensus 32 ~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 111 (267)
T 3u1s_H 32 AEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLTA 111 (267)
T ss_dssp CEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCCG
T ss_pred CEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCCh
Confidence 356778999999999865 234579998742 11 0 00 1222221 12599999999
Q ss_pred CCCeEEEEEeEe-------CC------------C-C----ceeeEEEEEEE----eccEEEeccceeeeeccCeEEEEEE
Q psy15206 136 EDRGAYYCVAQN-------GI------------G-R----GARRKIEVKVE----FAPIVTVQSTRIGQALHHDMDLDCH 187 (232)
Q Consensus 136 ~~~g~y~C~~~~-------~~------------~-~----~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~ 187 (232)
+|+|.|.|.+.+ .. . . .......+.|. .+|.+...........|+.++|.|.
T Consensus 112 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~ 191 (267)
T 3u1s_H 112 DDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL 191 (267)
T ss_dssp GGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCGGGEETTEEEEEEE
T ss_pred hhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCcccCCCCcEEEEEE
Confidence 999999999862 00 0 0 01112344553 3555553333333457899999999
Q ss_pred eecC-C-CCeEEEeeCCEEec-----------CCCeEE----EEEeccccCCceEEEEecC
Q psy15206 188 IEAY-P-HPILYWAKDGEIVV-----------NDEYHS----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 188 ~~~~-p-~~~~~W~~~g~~~~-----------~~~~~~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
+.++ | .+.+.| +|..+. .+..|. +.+......| |.|+|.|.
T Consensus 192 ~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~ 249 (267)
T 3u1s_H 192 VKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 249 (267)
T ss_dssp EEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEE
T ss_pred EeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEE
Confidence 9874 4 347999 443221 223333 3344455567 99999974
No 425
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.38 E-value=3.9e-12 Score=78.03 Aligned_cols=79 Identities=23% Similarity=0.516 Sum_probs=61.8
Q ss_pred CceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCc-----EEeeCCeEEECCCCCCCCeEEEEEeEeCCCCceeeE
Q psy15206 82 QLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQ-----TIFTGSTLQIPRITKEDRGAYYCVAQNGIGRGARRK 156 (232)
Q Consensus 82 ~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~-----~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~ 156 (232)
....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... .......|.|.++..+|.|.|+|.+.|..|. ....
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~-~~~~ 94 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGS-INHT 94 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEE-EEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCE-EEEE
Confidence 456777899999999999999999999999987654321 1223458999999999999999999998876 4455
Q ss_pred EEEEE
Q psy15206 157 IEVKV 161 (232)
Q Consensus 157 ~~l~v 161 (232)
+.+.|
T Consensus 95 ~~l~V 99 (100)
T 3caf_A 95 YHLDV 99 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 426
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.38 E-value=2.2e-12 Score=92.91 Aligned_cols=129 Identities=22% Similarity=0.339 Sum_probs=80.9
Q ss_pred CcceEeecCCeEEEEEEecC--CCCCeEEEEeCcE---------------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEG--HPIPTISWRRNFK--------------------------------------------- 52 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~--~p~~~~~W~~~~~--------------------------------------------- 52 (232)
+.++.+.+|++++|.|.+.+ .+...+.|+|+..
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 56788999999999999976 3367899998210
Q ss_pred ---eeeeEEEEeeee----------cCceeec----CCcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeCCe
Q psy15206 53 ---RLGRLHLAIPYT----------SPEAQVD----TPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRENN 113 (232)
Q Consensus 53 ---~~~~~~~~~~~~----------~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~ 113 (232)
+.|.|.|..... ...|.|. .+|.+... .....+..|+.+.|.|.+.+ .|.+ .+.|++++.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 165 (253)
T 3liz_H 87 KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPL-APGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (253)
T ss_dssp CGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEE-CC------CCEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred ChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEe-cCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCe
Confidence 012444443211 1244553 23333321 12223446899999999988 6656 799999886
Q ss_pred ee--------CCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 114 AI--------LPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 114 ~~--------~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.. ... ......+.|.|.....+| |.|+|.+.|..+.
T Consensus 166 ~~~~~~~~~~~~~-g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~ 209 (253)
T 3liz_H 166 SSGVHTFPAVLQS-DLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 209 (253)
T ss_dssp CTTEEECCCEEET-TEEEEEEEEEEETTSTTT-SCCEEEEEEGGGT
T ss_pred ecceEeCCccccC-CeEEEEEEEEEcHHHCCC-ceEEEEEEECCCC
Confidence 32 111 122223578899999999 9999999997654
No 427
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.38 E-value=3.1e-12 Score=80.85 Aligned_cols=93 Identities=30% Similarity=0.624 Sum_probs=67.7
Q ss_pred cCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC------cEEeeCCeEEEC-----CCCCCCCe
Q psy15206 71 DTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG------QTIFTGSTLQIP-----RITKEDRG 139 (232)
Q Consensus 71 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~------~~~~~~~~l~i~-----~~~~~~~g 139 (232)
..+|.+.. .+....+..|+.+.|.|.+.|.|.|.+.|++++..+.... .....++.+.+. ++..+|.|
T Consensus 7 ~~pP~i~~-~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G 85 (117)
T 2v9t_A 7 DFPPRIVE-HPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (117)
T ss_dssp CEEEEEEE-CCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCE
T ss_pred cCCCeeEc-CCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCE
Confidence 34555544 5667788899999999999999999999999998875432 122234444444 45789999
Q ss_pred EEEEEeEeCCCCceeeEEEEEEEec
Q psy15206 140 AYYCVAQNGIGRGARRKIEVKVEFA 164 (232)
Q Consensus 140 ~y~C~~~~~~~~~~~~~~~l~v~~~ 164 (232)
.|.|.+.|..|......+.+.+...
T Consensus 86 ~Y~C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 86 VYVCVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC--
T ss_pred EEEEEEEeCccceEeeeEEEEhhhh
Confidence 9999999998886666677766543
No 428
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.38 E-value=5.9e-12 Score=78.41 Aligned_cols=82 Identities=17% Similarity=0.252 Sum_probs=61.5
Q ss_pred CCCceEeecCCcEEEEeeeccCCC---CeEEEEeCCeeeCC---CCcEEe----------eCCeEEECCCCCCCCeEEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPI---PTISWRRENNAILP---NGQTIF----------TGSTLQIPRITKEDRGAYYC 143 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~---~~~~W~~~~~~~~~---~~~~~~----------~~~~l~i~~~~~~~~g~y~C 143 (232)
.+....+.+|+.+.|.|.+.|.|. +.+.|++++..... ..++.. ....|.|.+++.+|+|.|+|
T Consensus 10 ~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 89 (108)
T 3cx2_A 10 RPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRC 89 (108)
T ss_dssp CCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEE
T ss_pred CCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEE
Confidence 566778889999999999999887 89999997632211 112211 13579999999999999999
Q ss_pred EeEeCCCCceeeEEEEEEE
Q psy15206 144 VAQNGIGRGARRKIEVKVE 162 (232)
Q Consensus 144 ~~~~~~~~~~~~~~~l~v~ 162 (232)
.+.|..|. ....+.|.|.
T Consensus 90 ~a~N~~G~-~~~~~~L~V~ 107 (108)
T 3cx2_A 90 EVSTKDKF-DCSNFNLTVH 107 (108)
T ss_dssp EEECSSCE-EEEEEEEEEE
T ss_pred EEecCCCc-eEEEEEEEEe
Confidence 99998886 5566666664
No 429
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.38 E-value=6.3e-12 Score=78.94 Aligned_cols=94 Identities=22% Similarity=0.416 Sum_probs=69.5
Q ss_pred cCceeecCCc-EEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee-CC---eEEECCCCCCCCe
Q psy15206 65 SPEAQVDTPP-VILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT-GS---TLQIPRITKEDRG 139 (232)
Q Consensus 65 ~~~l~v~~~p-~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~---~l~i~~~~~~~~g 139 (232)
...|.|...| .+.. .+....+.+|+.+.|.|.+.+. +.+.|++++..+....++... ++ .|.|.++..+|.|
T Consensus 10 ~~~l~V~~~pp~~~~-~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G 86 (113)
T 2edh_A 10 SAMLTVRALPIKFTE-GLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAG 86 (113)
T ss_dssp CCCCCCCCSCCCEEE-CCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCE
T ss_pred EEEEEEEcCCCcccc-cCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCE
Confidence 4566776444 4433 4566788899999999999764 689999999887655554332 33 7999999999999
Q ss_pred EEEEEeEeCCCCceeeEEEEEEEeccE
Q psy15206 140 AYYCVAQNGIGRGARRKIEVKVEFAPI 166 (232)
Q Consensus 140 ~y~C~~~~~~~~~~~~~~~l~v~~~p~ 166 (232)
.|.|.+ +. ......|.|..+|.
T Consensus 87 ~Y~C~a----~~-~~~~~~l~V~~~p~ 108 (113)
T 2edh_A 87 EYLCMC----GK-ERTSAMLTVRAMPS 108 (113)
T ss_dssp EEEEEE----TT-EEEEEEEEECCCCC
T ss_pred EEEEEe----CC-CCEEEEEEEeCCCC
Confidence 999999 33 55667777776654
No 430
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=1.3e-12 Score=80.79 Aligned_cols=92 Identities=14% Similarity=0.118 Sum_probs=67.8
Q ss_pred ecCCcEEecCCCCceEeecCCcEEEEeeeccCCC-CeEEEEeCCeeeCCCCcEEee----CCeEEECCCCCCCCeEEEEE
Q psy15206 70 VDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPI-PTISWRRENNAILPNGQTIFT----GSTLQIPRITKEDRGAYYCV 144 (232)
Q Consensus 70 v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~W~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~C~ 144 (232)
|..+|..+...+....+.+|+.+.|.|.+.+.+. +.+.|+++|..+....++... ...|.|.++..+|+|.|+|.
T Consensus 4 V~~~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 83 (104)
T 2eny_A 4 GSSGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFS 83 (104)
T ss_dssp CCCCCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEE
T ss_pred cccCCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEE
Confidence 4444444444567788999999999999988764 479999999887655544332 23799999999999999998
Q ss_pred eEeCCCCceeeEEEEEEEeccE
Q psy15206 145 AQNGIGRGARRKIEVKVEFAPI 166 (232)
Q Consensus 145 ~~~~~~~~~~~~~~l~v~~~p~ 166 (232)
+.+ ......|.|..+|.
T Consensus 84 a~~-----~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 84 VRG-----LTSKASLIVRERSG 100 (104)
T ss_dssp ETT-----EEEEECEEEECCCS
T ss_pred ECC-----eeEEEEEEEeCCCc
Confidence 743 34566777776653
No 431
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.38 E-value=3.9e-12 Score=104.86 Aligned_cols=136 Identities=11% Similarity=0.102 Sum_probs=95.2
Q ss_pred CcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCC-CCCCCeEEEEEeEeCCCCceeeEEEEEE---Eecc
Q psy15206 90 QSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRI-TKEDRGAYYCVAQNGIGRGARRKIEVKV---EFAP 165 (232)
Q Consensus 90 ~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~-~~~~~g~y~C~~~~~~~~~~~~~~~l~v---~~~p 165 (232)
..+.+.|.+.|.|.+.+.|.++|....... ...+.|..+ .....+.|.|.+.+..|......+.+.. ..+|
T Consensus 92 g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~-----~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p 166 (731)
T 2v5y_A 92 GLLNVYVKVNNGPLGNPIWNISGDPTRTWN-----RAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTP 166 (731)
T ss_dssp EEEEEEEEETTCCCCSEEEEECCCCCSSCE-----EEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSC
T ss_pred ceEEEEEecCCCCccceeEEEeCCcCCcee-----EEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeeccccccc
Confidence 478999999999999999999997753221 123455544 2233478888776666643322222222 2456
Q ss_pred EEEeccceeeeeccCeEEEEEEeecCCCCeEE-Ee--eCCEEecCC---------CeEEEEEeccccCCceEEEEecC
Q psy15206 166 IVTVQSTRIGQALHHDMDLDCHIEAYPHPILY-WA--KDGEIVVND---------EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 166 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~-W~--~~g~~~~~~---------~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+. .+.+..+..|+++.|.|.+.|.|.|.+. |+ ++|..+... ....+.+.++...|.|.|+|.|.
T Consensus 167 ~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~ 243 (731)
T 2v5y_A 167 HFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIR 243 (731)
T ss_dssp EEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEE
T ss_pred ccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEE
Confidence 665 5667888999999999999999999987 88 777654321 13477788888999999999974
No 432
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=3.4e-12 Score=82.92 Aligned_cols=80 Identities=28% Similarity=0.535 Sum_probs=61.8
Q ss_pred CCceEeecCCcEEEEeeeccCCCCeEEEEeCC----------------------------eeeC-CCCcEEe--eC--Ce
Q psy15206 81 PQLSVAKEGQSVQLECHAEGHPIPTISWRREN----------------------------NAIL-PNGQTIF--TG--ST 127 (232)
Q Consensus 81 ~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~----------------------------~~~~-~~~~~~~--~~--~~ 127 (232)
+....+..|+.+.|.|.+.|.|.|.+.|++++ ..+. ...+... .. +.
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 56678889999999999999999999999998 3321 1122221 11 36
Q ss_pred EEECCCCCCCCeEEEEEeEeCCCCceeeEEEEEE
Q psy15206 128 LQIPRITKEDRGAYYCVAQNGIGRGARRKIEVKV 161 (232)
Q Consensus 128 l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 161 (232)
|.|.++...|+|.|+|.+.|..|. ....+.|.|
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~-~~~~~~L~V 137 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGE-DQVNLTVKV 137 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred EEECCCCcccCEEEEEEEEeCCce-EEEEEEEEE
Confidence 999999999999999999999886 556666655
No 433
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.37 E-value=2.6e-12 Score=90.80 Aligned_cols=129 Identities=19% Similarity=0.289 Sum_probs=81.1
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCc--E--e------------------e---------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNF--K--R------------------L--------------------- 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~--~--~------------------~--------------------- 54 (232)
+.++.+.+|++++|.|.+.+.+ .+.+.|+|+. . . .
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 5678899999999999999765 6789999832 0 0 0
Q ss_pred -----eeEEEEeeee--------------cCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEE
Q psy15206 55 -----GRLHLAIPYT--------------SPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWR 109 (232)
Q Consensus 55 -----~~~~~~~~~~--------------~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~ 109 (232)
|.|.|..... ...|.|.. +|.+....+.. .+..|+.+.|.|.+.+. |.+ .+.|+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~ 165 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSWN 165 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEEBSSCCEEECC
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeEECCCeEEEEe
Confidence 1333332111 12344443 23332212221 23578999999999885 666 89999
Q ss_pred eCCeeeCC--------CCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 110 RENNAILP--------NGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 110 ~~~~~~~~--------~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
+++..+.. ........+.|.|..+..+| |.|+|.+.|..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 213 (225)
T 1op3_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 213 (225)
T ss_dssp TTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGG
T ss_pred cCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCC
Confidence 98865210 00111112358888888888 999999999643
No 434
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=1.8e-12 Score=82.22 Aligned_cols=84 Identities=17% Similarity=0.213 Sum_probs=63.2
Q ss_pred CCCCceEeecCCcEEEEeeeccC---CCCeEEEEeCCeee-C--CCCcEEe----------eCCeEEECCCCCCCCeEEE
Q psy15206 79 NSPQLSVAKEGQSVQLECHAEGH---PIPTISWRRENNAI-L--PNGQTIF----------TGSTLQIPRITKEDRGAYY 142 (232)
Q Consensus 79 ~~~~~~~~~~g~~~~l~C~~~~~---~~~~~~W~~~~~~~-~--~~~~~~~----------~~~~l~i~~~~~~~~g~y~ 142 (232)
..+....+.+|+.+.|.|.+.+. |.|.+.|||+.... . ...+... ....|.|.++...|+|.|+
T Consensus 12 ~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~ 91 (126)
T 2dav_A 12 EKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYR 91 (126)
T ss_dssp SCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEE
T ss_pred EcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEE
Confidence 35677788999999999998764 78899999963110 0 0112211 1357999999999999999
Q ss_pred EEeEeCCCCceeeEEEEEEEe
Q psy15206 143 CVAQNGIGRGARRKIEVKVEF 163 (232)
Q Consensus 143 C~~~~~~~~~~~~~~~l~v~~ 163 (232)
|.+.|..+. ....+.|.|..
T Consensus 92 Cevsn~~g~-~~~~~~L~V~~ 111 (126)
T 2dav_A 92 CEVTYKDKF-DSCSFDLEVHE 111 (126)
T ss_dssp EEEECSSCE-EEECCEEEEEC
T ss_pred EEEEeCCCc-EEEEEEEEEEe
Confidence 999998765 66778888887
No 435
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.37 E-value=4e-12 Score=90.03 Aligned_cols=130 Identities=21% Similarity=0.293 Sum_probs=81.7
Q ss_pred CcceEeecCCeEEEEEEecCCCC----CeEEEEeCc--Ee-------------------e--------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPI----PTISWRRNF--KR-------------------L-------------------- 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~----~~~~W~~~~--~~-------------------~-------------------- 54 (232)
+.++.+.+|++++|.|.+.+.+. +.+.|+|+. .. .
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 56788999999999999998664 889999832 00 0
Q ss_pred ------eeEEEEeeee---------------cCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEE
Q psy15206 55 ------GRLHLAIPYT---------------SPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TIS 107 (232)
Q Consensus 55 ------~~~~~~~~~~---------------~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~ 107 (232)
|.|.|..... ...|.|.. +|.+....+. ..+..|+.+.|.|.+.+. |.+ .+.
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~~~l~C~~~g~~P~p~~v~ 165 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPVTLT 165 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC------CCSEEEEEEEEEEEBSSCCEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEeccc-ccccCCCCEEEEEEEccEeCCCEEEE
Confidence 2344443211 13455542 2333321222 234579999999999885 766 899
Q ss_pred EEeCCeeeCCCC-------cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 108 WRRENNAILPNG-------QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 108 W~~~~~~~~~~~-------~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
|++++..+.... ......+.|.|..+..++ |.|+|.+.|..+.
T Consensus 166 W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~ 215 (228)
T 3bae_H 166 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASS 215 (228)
T ss_dssp EGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred EeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCC
Confidence 999876421100 111123468888888766 9999999997664
No 436
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=4.7e-12 Score=78.12 Aligned_cols=87 Identities=18% Similarity=0.361 Sum_probs=64.8
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC--cEEee-C---CeEEECCCCCCCCeEEEEEeE
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG--QTIFT-G---STLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~--~~~~~-~---~~l~i~~~~~~~~g~y~C~~~ 146 (232)
+|..+...+....+.+|+.+.|.|.+.+ +.+.+.|++++..+.... ++... . ..|.|.++..+|.|.|+|.+.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 84 (103)
T 1x44_A 6 SGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTT 84 (103)
T ss_dssp SSCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEET
T ss_pred CCceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEEC
Confidence 3433333566678889999999999977 668899999999876554 32332 1 479999999999999999997
Q ss_pred eCCCCceeeEEEEEEEecc
Q psy15206 147 NGIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p 165 (232)
| ......+.|..+|
T Consensus 85 n-----~~~~~~l~V~~~p 98 (103)
T 1x44_A 85 G-----GQSSAKLSVDLKS 98 (103)
T ss_dssp T-----EEEEEEEEEECCC
T ss_pred C-----CcEEEEEEEeCCC
Confidence 6 3455666666544
No 437
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.37 E-value=1.7e-12 Score=86.24 Aligned_cols=72 Identities=22% Similarity=0.372 Sum_probs=60.6
Q ss_pred EEEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe----------EEEEEeccccCCceEEEEe
Q psy15206 160 KVEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY----------HSISNFGTSEGTTGSLQCK 229 (232)
Q Consensus 160 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~~d~g~Y~C~ 229 (232)
.+..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+|+|..+....+ ..|.+.++...|+|.|+|.
T Consensus 37 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 116 (154)
T 1fhg_A 37 KPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCK 116 (154)
T ss_dssp CCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEE
T ss_pred cCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEE
Confidence 345678888888888899999999999999999999999999988765443 4677778888999999998
Q ss_pred cC
Q psy15206 230 VP 231 (232)
Q Consensus 230 ~~ 231 (232)
|.
T Consensus 117 a~ 118 (154)
T 1fhg_A 117 AV 118 (154)
T ss_dssp EE
T ss_pred EE
Confidence 73
No 438
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.36 E-value=2e-11 Score=87.23 Aligned_cols=136 Identities=18% Similarity=0.245 Sum_probs=82.8
Q ss_pred CeeecCCCcceEeecCCeEEEEEEecCC--CCCeEEEEeCc--E--------------------eee-------------
Q psy15206 13 PVILNNSTQLSVAKEGQSVQLECHAEGH--PIPTISWRRNF--K--------------------RLG------------- 55 (232)
Q Consensus 13 P~i~~~~~~~~~~~~G~~v~l~C~~~~~--p~~~~~W~~~~--~--------------------~~~------------- 55 (232)
+.++.. +..+.+.+|++++|.|.+.+. +...+.|+|+. . ..+
T Consensus 2 ~~v~q~-p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 80 (242)
T 1hxm_B 2 GHLEQP-QISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTS 80 (242)
T ss_dssp CEEECC-CSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEE
T ss_pred CccCcC-CceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEE
Confidence 345544 778899999999999999875 56789999831 0 112
Q ss_pred -------------eEEEEeeee-------------cCceeecCC-------cEEecCCCCceEeecCCcEEEEeeeccC-
Q psy15206 56 -------------RLHLAIPYT-------------SPEAQVDTP-------PVILNNSPQLSVAKEGQSVQLECHAEGH- 101 (232)
Q Consensus 56 -------------~~~~~~~~~-------------~~~l~v~~~-------p~~~~~~~~~~~~~~g~~~~l~C~~~~~- 101 (232)
.|.|..... ...|.|... |......+....+..|+.+.|.|.+.+.
T Consensus 81 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~ 160 (242)
T 1hxm_B 81 TLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFF 160 (242)
T ss_dssp EEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEES
T ss_pred EEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEE
Confidence 233332111 123444431 1111111222234468999999999885
Q ss_pred CC-CeEEEEeCCe-eeCCCC---cE-----EeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 102 PI-PTISWRRENN-AILPNG---QT-----IFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 102 ~~-~~~~W~~~~~-~~~~~~---~~-----~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
|. +.+.|++++. .+.... .. ....+.|.|..... + |.|+|.+.|..+.
T Consensus 161 P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~ 218 (242)
T 1hxm_B 161 PDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNK 218 (242)
T ss_dssp SCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSG
T ss_pred CCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCC
Confidence 54 6899999987 442210 00 11123688877765 4 9999999998665
No 439
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.36 E-value=1.3e-12 Score=93.13 Aligned_cols=139 Identities=12% Similarity=0.149 Sum_probs=80.0
Q ss_pred CCCeeecCCCcceE-eecCCeEEEEEEecCC---CCC-eEEEEeCcEee-------------------------------
Q psy15206 11 TPPVILNNSTQLSV-AKEGQSVQLECHAEGH---PIP-TISWRRNFKRL------------------------------- 54 (232)
Q Consensus 11 ~~P~i~~~~~~~~~-~~~G~~v~l~C~~~~~---p~~-~~~W~~~~~~~------------------------------- 54 (232)
.+|.+...++.... +.+|++++|.|.+.+. |.+ .+.|+|++...
T Consensus 14 ~~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D 93 (239)
T 1i1c_A 14 EVSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLN 93 (239)
T ss_dssp ---CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHT
T ss_pred cCCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccC
Confidence 35666555233333 7899999999999875 654 89999954221
Q ss_pred -eeEEEEeeeecC------ce----eecCCcEEecCCCCceEeecCCcEEEEeeecc-CCC-CeEEEEeCCeeeCCCCc-
Q psy15206 55 -GRLHLAIPYTSP------EA----QVDTPPVILNNSPQLSVAKEGQSVQLECHAEG-HPI-PTISWRRENNAILPNGQ- 120 (232)
Q Consensus 55 -~~~~~~~~~~~~------~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~-~~~~W~~~~~~~~~~~~- 120 (232)
|.|.|...+... .+ .+..+|.+....... ....|+.+.|.|.+.| .|. ..+.|+++|..+.....
T Consensus 94 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~-~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~ 172 (239)
T 1i1c_A 94 GKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPK-EEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNT 172 (239)
T ss_dssp TCCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCG-GGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEEC
T ss_pred CCeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCCh-HHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceec
Confidence 244444422211 11 233445443222221 1224788999999988 454 37999999987642111
Q ss_pred --EEeeCC------eEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 121 --TIFTGS------TLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 121 --~~~~~~------~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
....++ .|.+......+.|.|+|.+.|...
T Consensus 173 ~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 173 PPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 111222 234444444568999999999654
No 440
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.36 E-value=1.3e-11 Score=74.56 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=55.0
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee-C---CeEEECCCCCCCCeEEEEEeEe
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT-G---STLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~---~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+....+.+|+.+.|.|.+.+ +.+.+.|+++|..+....+.... . ..|.|.++..+|.|.|+|.+.|
T Consensus 11 ~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 11 PLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred cCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 566778889999999999976 45789999999988665554332 2 3799999999999999999976
No 441
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.36 E-value=3.3e-12 Score=78.31 Aligned_cols=68 Identities=12% Similarity=0.265 Sum_probs=56.2
Q ss_pred ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC--C---------eEEEEEeccccCCceEEEEecC
Q psy15206 164 APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND--E---------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 164 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~--~---------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+... . ...|.+.++...|+|.|+|.|.
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 566666677788899999999999999999999999999887521 2 2567778888999999999874
No 442
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=1.3e-12 Score=80.21 Aligned_cols=66 Identities=17% Similarity=0.173 Sum_probs=54.3
Q ss_pred ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EEEEEeccccCCceEEEEecC
Q psy15206 164 APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 164 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|.+...+.+..+..|+.+.|.|.+ .|.+.+.|+|||..+..+.+ ..|.+.++..+|+|.|+|.|.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPD 81 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEES
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEc
Confidence 4555566777889999999999999 78889999999988865443 356777888899999999974
No 443
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.35 E-value=6e-12 Score=91.93 Aligned_cols=66 Identities=17% Similarity=0.312 Sum_probs=47.1
Q ss_pred eEeecCCcEEEEeeecc-CC-CCeEEEEeCC--eeeC------------CCCcEEee----CCeEEECCCCCCCCeEEEE
Q psy15206 84 SVAKEGQSVQLECHAEG-HP-IPTISWRREN--NAIL------------PNGQTIFT----GSTLQIPRITKEDRGAYYC 143 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~-~~-~~~~~W~~~~--~~~~------------~~~~~~~~----~~~l~i~~~~~~~~g~y~C 143 (232)
..+.+|+++.|.|.+.+ .+ .+.+.|++.. ..+. ...++... ...|.|.+++.+|+|.|.|
T Consensus 149 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 228 (280)
T 3fku_X 149 VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYC 228 (280)
T ss_dssp EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEE
T ss_pred EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEE
Confidence 67889999999999987 43 3689999742 2111 01122211 1259999999999999999
Q ss_pred EeEeCC
Q psy15206 144 VAQNGI 149 (232)
Q Consensus 144 ~~~~~~ 149 (232)
.+.+..
T Consensus 229 ~~~~~~ 234 (280)
T 3fku_X 229 STWDSS 234 (280)
T ss_dssp EEEETT
T ss_pred EEecCC
Confidence 998864
No 444
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=2.9e-12 Score=78.60 Aligned_cols=69 Identities=20% Similarity=0.331 Sum_probs=57.2
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC-CC------eEEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN-DE------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~-~~------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+|+|..+.. .. ...|.+.++...|+|.|+|.|.
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVAT 82 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEE
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEE
Confidence 467777778888889999999999999999999999999987762 11 2257777888899999999874
No 445
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.35 E-value=7e-11 Score=80.10 Aligned_cols=146 Identities=13% Similarity=0.166 Sum_probs=95.1
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeC-CeEEECCCCCCCCeEEEEEeEeCCCCceeeEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTG-STLQIPRITKEDRGAYYCVAQNGIGRGARRKIE 158 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~-~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 158 (232)
.+....+..|+++.|+|......+..+.|...-..... ....+ ..+.|.++. +.|.|.|.+...... ..+.+.
T Consensus 8 ~P~~~~V~~G~S~~l~Cs~~c~~p~~~glet~l~~~~~---~~g~~w~~l~l~~vs--~~g~~~C~~~c~~~~-~~~~~~ 81 (192)
T 1zxq_A 8 RPKKLAVEPKGSLEVNCSTTCNQPEVGGLETSLNKILL---DEQAQWKHYLVSNIS--HDTVLQCHFTCSGKQ-ESMNSN 81 (192)
T ss_dssp ESSEEEECTTEEEEEEEEESCSSCSEEEEECSSEEEEE---EEETTEEEEEEEEEC--SCEEEEEEEEETTEE-EEEEEE
T ss_pred eCCCcEEeCCCcEEEEEECCCCCccccccccccCceEE---cCCCCeEEEEEeccc--cCCeeEEEEECCCcc-eEEEEE
Confidence 34566778899999999986433334666542221100 01111 358888988 788999999875433 557788
Q ss_pred EEEEeccE-EEeccceeeeeccCeEEEEEEeec-CCCCe--EEEeeCCEEecCC---------CeEEEE-EeccccCCce
Q psy15206 159 VKVEFAPI-VTVQSTRIGQALHHDMDLDCHIEA-YPHPI--LYWAKDGEIVVND---------EYHSIS-NFGTSEGTTG 224 (232)
Q Consensus 159 l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~--~~W~~~g~~~~~~---------~~~~~~-~~~~~~~d~g 224 (232)
+.|+.+|. +.+.+.+..+..|+.++|.|.+.+ .|... +.|+|++..+... ....+. ...++.+|.|
T Consensus 82 itVy~~P~~v~i~~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~~~f~~~~~~~~~~tv~~~~~~~r~D~g 161 (192)
T 1zxq_A 82 VSVYQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGH 161 (192)
T ss_dssp EEECBCCCCCEEEEESSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEEECCSSTTCTTCEEEEEEEECCGGGGG
T ss_pred EEEEeCCCCceEccCCccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeeecccccccCcCcceEEEEEEecchhhCC
Confidence 88888774 344433345789999999999975 66654 8999998776421 122222 2234556777
Q ss_pred -EEEEecC
Q psy15206 225 -SLQCKVP 231 (232)
Q Consensus 225 -~Y~C~~~ 231 (232)
+|.|+|.
T Consensus 162 ~~~sC~A~ 169 (192)
T 1zxq_A 162 RNFSCLAV 169 (192)
T ss_dssp CEEEEEEE
T ss_pred ceEEEEEE
Confidence 9999985
No 446
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.35 E-value=5.9e-12 Score=76.76 Aligned_cols=65 Identities=20% Similarity=0.213 Sum_probs=53.3
Q ss_pred EEeccceeeeeccCeEEEEEEeecC-CCCeEEEeeCCEEecCCCeE---------EEEEeccccCCceEEEEecC
Q psy15206 167 VTVQSTRIGQALHHDMDLDCHIEAY-PHPILYWAKDGEIVVNDEYH---------SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 167 ~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~W~~~g~~~~~~~~~---------~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+...+.+..+..|+.+.|.|.+.|. |.+.+.|+|++..+....++ .|.+.++...|+|.|.|.|.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVV 78 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEE
Confidence 3445667788899999999999997 88999999999887655443 56677788899999999874
No 447
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=1e-11 Score=77.91 Aligned_cols=82 Identities=21% Similarity=0.447 Sum_probs=64.0
Q ss_pred eEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee-C---CeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEE
Q psy15206 84 SVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT-G---STLQIPRITKEDRGAYYCVAQNGIGRGARRKIEV 159 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~---~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 159 (232)
..+.+|+.+.|.|.+. .+.+.+.|++++..+....+.... . ..|.|.++..+|.|.|.|.+.| ....+.|
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n-----~~~~~~l 96 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD-----ESASFTV 96 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS-----CEEEEEE
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec-----CcEEEEE
Confidence 5677899999999995 677889999999887654443332 2 4799999999999999999987 3456788
Q ss_pred EEEeccEEEecc
Q psy15206 160 KVEFAPIVTVQS 171 (232)
Q Consensus 160 ~v~~~p~~~~~~ 171 (232)
.|..+|.....+
T Consensus 97 ~V~~~p~~~~~p 108 (113)
T 2cpc_A 97 TVTEPPVRIIYS 108 (113)
T ss_dssp EEECCCCCCCCC
T ss_pred EEecCCchhccC
Confidence 888877654443
No 448
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.34 E-value=1.2e-12 Score=78.66 Aligned_cols=56 Identities=20% Similarity=0.380 Sum_probs=45.9
Q ss_pred eeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EEEEEeccccCCceEEEEecC
Q psy15206 175 GQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 175 ~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+..|+++.|.|.+.+ |.+.+.|+|||..+..+.+ ..|.+.++..+|+|.|+|.|.
T Consensus 17 ~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 17 HAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp ECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECS
T ss_pred EEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEc
Confidence 4457999999999855 8889999999988765443 467777888899999999874
No 449
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.34 E-value=9.9e-12 Score=77.25 Aligned_cols=84 Identities=15% Similarity=0.312 Sum_probs=63.8
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCe-eeC-------CCCcEEe-----eCCeEEECCCCCCCCeEEEEEeE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENN-AIL-------PNGQTIF-----TGSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~-~~~-------~~~~~~~-----~~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
.+....+.+|+++.|.|.+.+.+.+.+.|++++. .+. ...++.. ...+|.|.++..+|.|.|+|.+.
T Consensus 12 ~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (108)
T 3m45_A 12 LTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLF 91 (108)
T ss_dssp ECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEEC
T ss_pred cCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEE
Confidence 4566788899999999999998888999998775 211 1223332 24579999999999999999999
Q ss_pred eCCCCceeeEEEEEEEecc
Q psy15206 147 NGIGRGARRKIEVKVEFAP 165 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p 165 (232)
+ .+. ....+.|.|..+|
T Consensus 92 n-~~~-~~~~~~L~V~~~P 108 (108)
T 3m45_A 92 T-MPV-KTSKAYLTVLGVP 108 (108)
T ss_dssp S-SSC-EEEEEEEEEECCC
T ss_pred c-CCC-cEEEEEEEEEcCC
Confidence 9 554 5667777776654
No 450
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.33 E-value=4.6e-12 Score=88.88 Aligned_cols=130 Identities=14% Similarity=0.213 Sum_probs=74.2
Q ss_pred CcceEeecCCeEEEEEEecC--CCCCeEEEEeCc-----E----------------------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEG--HPIPTISWRRNF-----K---------------------------------------- 52 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~--~p~~~~~W~~~~-----~---------------------------------------- 52 (232)
+.++.+.+|++++|.|.+.+ .+...+.|+|+. .
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTE 85 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGG
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcc
Confidence 67788999999999999976 346789998721 0
Q ss_pred eeeeEEEEeeee----------cCceeec----CCcEEecCCCCceEeecCCcEEEEeeeccCCC--CeEEEEeCCeeeC
Q psy15206 53 RLGRLHLAIPYT----------SPEAQVD----TPPVILNNSPQLSVAKEGQSVQLECHAEGHPI--PTISWRRENNAIL 116 (232)
Q Consensus 53 ~~~~~~~~~~~~----------~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~W~~~~~~~~ 116 (232)
+.|.|.|..... ...|.|. .+|.+....+. ..+..|+.+.|.|.+.+.++ ..+.|++++..+.
T Consensus 86 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~ 164 (215)
T 3nl4_H 86 DTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPC-CGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNG 164 (215)
T ss_dssp GCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCC-TTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred cCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCC-ccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECC
Confidence 113455544211 2245554 33433321222 23446899999999988544 3577999886432
Q ss_pred C--CCcEEeeCCeEEE---CCCCCCCCeEEEEEeEeCCCC
Q psy15206 117 P--NGQTIFTGSTLQI---PRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 117 ~--~~~~~~~~~~l~i---~~~~~~~~g~y~C~~~~~~~~ 151 (232)
. .......++.+.+ ..+...| |.|+|.+.|..+.
T Consensus 165 ~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~ 203 (215)
T 3nl4_H 165 VRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATN 203 (215)
T ss_dssp EEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGT
T ss_pred eEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCC
Confidence 1 1111122333333 3455566 9999999997654
No 451
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.33 E-value=3.7e-12 Score=80.37 Aligned_cols=69 Identities=19% Similarity=0.339 Sum_probs=57.8
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC-----------CeEEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND-----------EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~-----------~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+.+..+..|+++.|.|.+.|.|.+.+.|+++|..+... ..+.|.+.++...|+|.|+|.|.
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 93 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAV 93 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEE
Confidence 4677777788888999999999999999999999999999877532 23367778888899999999873
No 452
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.33 E-value=3e-13 Score=86.25 Aligned_cols=96 Identities=30% Similarity=0.478 Sum_probs=73.6
Q ss_pred cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCe-EEEEeCCeeeCC--CCcEEee--------CCeEEECCC
Q psy15206 65 SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPT-ISWRRENNAILP--NGQTIFT--------GSTLQIPRI 133 (232)
Q Consensus 65 ~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~W~~~~~~~~~--~~~~~~~--------~~~l~i~~~ 133 (232)
.+.|.|..+|.+.. +....+.+|+.+.|.|.+.|.|.|. +.|++++..+.. ..++... .+.|.|.++
T Consensus 6 ~~~l~V~~~P~i~~--~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v 83 (122)
T 2cry_A 6 SGTLTVNGPPIISS--TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNI 83 (122)
T ss_dssp CCCCCCCSSCCEEE--ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTC
T ss_pred EEEEEEecCCCccC--CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCC
Confidence 45678888887765 4556778899999999999999987 999999987754 2333221 237999999
Q ss_pred CCCCC-eEEEEEeEeCCCCceeeEEEEEEEe
Q psy15206 134 TKEDR-GAYYCVAQNGIGRGARRKIEVKVEF 163 (232)
Q Consensus 134 ~~~~~-g~y~C~~~~~~~~~~~~~~~l~v~~ 163 (232)
...|. |.|.|.+.|..|. ....+.|.|..
T Consensus 84 ~~~D~~G~Y~C~a~N~~G~-~~~~~~l~V~~ 113 (122)
T 2cry_A 84 VRADFQTIYNCTAWNSFGS-DTEIIRLKEQG 113 (122)
T ss_dssp CHHHHHSCEEEEEECSSCE-EEEEECCCCSC
T ss_pred ChhhCCceEEEEEECCCCe-EEEEEEEEECC
Confidence 99999 9999999999887 44555555543
No 453
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.33 E-value=1.4e-12 Score=80.97 Aligned_cols=69 Identities=12% Similarity=0.292 Sum_probs=58.2
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+|+|..+....+ ..|.+.++...|+|.|+|.|.
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 90 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVE 90 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCB
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEE
Confidence 456777788888899999999999999999999999999877654433 467777888899999999874
No 454
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.33 E-value=1.9e-12 Score=78.66 Aligned_cols=67 Identities=15% Similarity=0.234 Sum_probs=54.6
Q ss_pred ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeE-----EEEEeccccCCceEEEEecC
Q psy15206 164 APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYH-----SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 164 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~-----~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|.+...+....+..|+.+.|.|.+.|.| +.+.|+|+|..+....++ .|.+.++...|+|.|.|.|.
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 80 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTS 80 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEE
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEeCCEEEECCCChHHCEEEEEEec
Confidence 44555556777888999999999999997 799999999887655444 47777888899999999873
No 455
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=1.2e-12 Score=81.87 Aligned_cols=69 Identities=23% Similarity=0.380 Sum_probs=58.2
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC----------eEEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE----------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~----------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+|+|..+.... ...|.+.++...|+|.|+|.|.
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 46778778888889999999999999999999999999987665332 3467888889999999999874
No 456
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=5.8e-12 Score=77.72 Aligned_cols=86 Identities=20% Similarity=0.364 Sum_probs=65.2
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee-C---CeEEECCCCCCCCeEEEEEeEeC
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT-G---STLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~---~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
+|.+.. .+....+.+|+.+.|.|.+.+ +.+.+.|++++..+....++... . ..|.|.++..+|.|.|+|.+.|
T Consensus 8 pp~~~~-~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n- 84 (103)
T 2edf_A 8 PAAIIK-PLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA- 84 (103)
T ss_dssp CCCEEE-CCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS-
T ss_pred CcEEEe-cCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc-
Confidence 344433 556678889999999999987 77789999999887655554332 2 2699999999999999999988
Q ss_pred CCCceeeEEEEEEEecc
Q psy15206 149 IGRGARRKIEVKVEFAP 165 (232)
Q Consensus 149 ~~~~~~~~~~l~v~~~p 165 (232)
....+.|.|..+|
T Consensus 85 ----~~~~~~l~V~~~p 97 (103)
T 2edf_A 85 ----SKSTASLHVEEKA 97 (103)
T ss_dssp ----CEEEEEEEECCCS
T ss_pred ----CCcEEEEEEeCCC
Confidence 2456677776554
No 457
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.33 E-value=3.4e-11 Score=82.07 Aligned_cols=118 Identities=14% Similarity=0.192 Sum_probs=75.2
Q ss_pred CcceEeecCCeEEEEEEecC-CCCCeEEEEeC-cEee-----------------eeE----------------------E
Q psy15206 20 TQLSVAKEGQSVQLECHAEG-HPIPTISWRRN-FKRL-----------------GRL----------------------H 58 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~-~p~~~~~W~~~-~~~~-----------------~~~----------------------~ 58 (232)
..++.+.+|++|+|.|.+.. .+.+.|.|+|. ...+ +|+ .
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~ 85 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYY 85 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEE
T ss_pred cceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEE
Confidence 45678999999999999865 34689999993 1100 222 2
Q ss_pred EEeee-----ecCceeecCCcEEecCCCCceEeecCCcEEEEeee-ccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECC
Q psy15206 59 LAIPY-----TSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHA-EGHPIPTISWRRENNAILPNGQTIFTGSTLQIPR 132 (232)
Q Consensus 59 ~~~~~-----~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~ 132 (232)
|.... ..+.|.|..++ ........+..+.|.|.+ .+ |.+.+.|++++..+. ...+.+|.+..
T Consensus 86 C~v~~~~~~~~~~~L~V~~~~------~~P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~-----~~~~~~l~~~~ 153 (180)
T 2dru_A 86 MRMLHETEDQWKITMEVYEMV------SKPMIYWECSNATLTCEVLEG-TDVELKLYQGKEHLR-----SLRQKTMSYQW 153 (180)
T ss_dssp EEEESSSEEEEEEEEEEECCC------CCCEEEEEGGGTEEEEECSSC-TTCEEEEEETTEEEE-----EESSSEEEEEC
T ss_pred EEEEcCCeEEEEEEEEEECCC------CCCEEEecCCCEEEEEEeCCC-CCCEEEEEECCeECc-----CCCCCEEEEEE
Confidence 22100 02233333221 111122245679999999 55 888999999998764 22344566633
Q ss_pred CCCCCCeEEEEEeEeCCCC
Q psy15206 133 ITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 133 ~~~~~~g~y~C~~~~~~~~ 151 (232)
.+|.|.|+|.+.|..+.
T Consensus 154 --~~d~g~Y~C~a~N~~~~ 170 (180)
T 2dru_A 154 --TNLRAPFKCKAVNRVSQ 170 (180)
T ss_dssp --SCCSSCEEEEEEETTEE
T ss_pred --hhcCccEEEEEecCcCc
Confidence 78999999999998765
No 458
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=2e-12 Score=80.81 Aligned_cols=69 Identities=17% Similarity=0.340 Sum_probs=56.3
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC-C----------CeEEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN-D----------EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~-~----------~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+|+|..+.. . ..+.|.+.++...|+|.|+|.|.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAA 86 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEE
Confidence 356666667777889999999999999999999999999877653 2 23367777888999999999874
No 459
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=4.3e-11 Score=74.45 Aligned_cols=83 Identities=11% Similarity=0.131 Sum_probs=64.7
Q ss_pred cCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC----------cEEeeC----CeEEECCCCCCCCeEEEE
Q psy15206 78 NNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG----------QTIFTG----STLQIPRITKEDRGAYYC 143 (232)
Q Consensus 78 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~----------~~~~~~----~~l~i~~~~~~~~g~y~C 143 (232)
...+....+.+|+.+.|.|.+.+ .+.+.|+++|..+.... ++.... .+|.|.++..+|+|.|+|
T Consensus 12 ~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~ 89 (112)
T 2e6q_A 12 VAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVG 89 (112)
T ss_dssp EECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEE
T ss_pred ecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEE
Confidence 34677788999999999999987 67899999999987665 544432 279999999999999988
Q ss_pred EeEeCCCCceeeEEEEEEEeccE
Q psy15206 144 VAQNGIGRGARRKIEVKVEFAPI 166 (232)
Q Consensus 144 ~~~~~~~~~~~~~~~l~v~~~p~ 166 (232)
...+. ......|.|..+|.
T Consensus 90 ~~~~~----~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 90 FSCPG----VQDSAALTIQESSG 108 (112)
T ss_dssp EEETT----EEEEEEEEEECSSC
T ss_pred EEECC----eeEEEEEEEeCCCc
Confidence 65532 34567888877663
No 460
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=2.9e-12 Score=80.29 Aligned_cols=85 Identities=19% Similarity=0.242 Sum_probs=63.4
Q ss_pred cCCCCceEeecCCcEEEEeeeccC---CCCeEEEEeCCeee-CC--CCcEEe----------eCCeEEECCCCCCCCeEE
Q psy15206 78 NNSPQLSVAKEGQSVQLECHAEGH---PIPTISWRRENNAI-LP--NGQTIF----------TGSTLQIPRITKEDRGAY 141 (232)
Q Consensus 78 ~~~~~~~~~~~g~~~~l~C~~~~~---~~~~~~W~~~~~~~-~~--~~~~~~----------~~~~l~i~~~~~~~~g~y 141 (232)
...+....+.+|+.+.|.|.+.+. |.|.+.||++.... .. ..++.. ....|.|.++...|+|.|
T Consensus 16 ~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 95 (118)
T 2edn_A 16 LKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYY 95 (118)
T ss_dssp SBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCE
T ss_pred EECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEE
Confidence 345677889999999999999774 67899999964111 10 111111 136799999999999999
Q ss_pred EEEeEeCCCCceeeEEEEEEEe
Q psy15206 142 YCVAQNGIGRGARRKIEVKVEF 163 (232)
Q Consensus 142 ~C~~~~~~~~~~~~~~~l~v~~ 163 (232)
+|.+.+..+. .+..+.|.|..
T Consensus 96 ~Cevsn~~g~-~s~~~~L~V~~ 116 (118)
T 2edn_A 96 RLEVKAKDTC-DSCGFNIDVEA 116 (118)
T ss_dssp EEEEECSSCE-EEEEECCEEEC
T ss_pred EEEEEEcCCc-EEEEEEEEEEc
Confidence 9999998886 66777777765
No 461
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.31 E-value=3.2e-11 Score=73.93 Aligned_cols=87 Identities=22% Similarity=0.355 Sum_probs=64.5
Q ss_pred CcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee--C--CeEEECCCCCCCCeEEEEEeEeC
Q psy15206 73 PPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT--G--STLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 73 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~--~--~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
+|.+.........+.+|+.+.|.|.+. .|.+.+.|++++..+....++... . ..|.|.++..+|.|.|.|.+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a--- 82 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA--- 82 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE---
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE---
Confidence 455554333335677899999999998 688899999999887655444332 1 26999999999999999999
Q ss_pred CCCceeeEEEEEEEecc
Q psy15206 149 IGRGARRKIEVKVEFAP 165 (232)
Q Consensus 149 ~~~~~~~~~~l~v~~~p 165 (232)
+. ......|.|..+|
T Consensus 83 -g~-~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 -GD-EKCSTELFVRSGP 97 (100)
T ss_dssp -TT-EEEEEEEEECCSC
T ss_pred -CC-ceEEEEEEEecCC
Confidence 33 4556677777665
No 462
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.30 E-value=1.5e-11 Score=87.63 Aligned_cols=138 Identities=11% Similarity=0.195 Sum_probs=81.3
Q ss_pred CCCeeecCCCcceE-eecCCeEEEEEEecCC---C-CCeEEEEeCcEee-------------e-----------------
Q psy15206 11 TPPVILNNSTQLSV-AKEGQSVQLECHAEGH---P-IPTISWRRNFKRL-------------G----------------- 55 (232)
Q Consensus 11 ~~P~i~~~~~~~~~-~~~G~~v~l~C~~~~~---p-~~~~~W~~~~~~~-------------~----------------- 55 (232)
.+|.+.+.+|.... +..|++++|.|.+.+. | ...++|++++..+ +
T Consensus 21 ~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d 100 (240)
T 4acp_A 21 GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLN 100 (240)
T ss_dssp --CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHH
T ss_pred CCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccC
Confidence 36777666455555 6679999999999985 3 4589999976542 2
Q ss_pred --eEEEEeeeec--------Cc--eeecCCcEEecCCCCceEeecCCcEEEEeeecc-CCCC-eEEEEeCCeeeCCCC--
Q psy15206 56 --RLHLAIPYTS--------PE--AQVDTPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIP-TISWRRENNAILPNG-- 119 (232)
Q Consensus 56 --~~~~~~~~~~--------~~--l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~W~~~~~~~~~~~-- 119 (232)
.|.|.+.... +. +.+..+|.+....+... ...|+.+.|.|.+.+ +|.+ .+.|+++|..+....
T Consensus 101 ~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~-~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~ 179 (240)
T 4acp_A 101 GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKAT 179 (240)
T ss_dssp TCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEEC
T ss_pred CCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChH-HhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCcc
Confidence 3333332211 11 11223444433222211 224889999999998 4553 799999998753210
Q ss_pred -------cEEeeCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 120 -------QTIFTGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 120 -------~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
......+.|.+......+.|.|+|.+.+..
T Consensus 180 ~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 180 PPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred CceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 111112345565555567889999999864
No 463
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=8.8e-12 Score=78.90 Aligned_cols=69 Identities=13% Similarity=0.210 Sum_probs=55.2
Q ss_pred eccEEEe---ccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC--------CeEEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTV---QSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND--------EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~---~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~--------~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+.. .+....+..|+.+.|.|.+.|.|.|.+.|+|+|..+... ....|.+.++...|+|.|+|.|.
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 99 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQ 99 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEEEE
Confidence 4566644 245677889999999999999999999999999887521 23457788889999999999873
No 464
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.30 E-value=2.6e-11 Score=87.64 Aligned_cols=129 Identities=19% Similarity=0.261 Sum_probs=81.2
Q ss_pred CcceEeecCCeEEEEEEecCCC--CCeEEEEeCc----Ee------------------ee--------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHP--IPTISWRRNF----KR------------------LG-------------------- 55 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p--~~~~~W~~~~----~~------------------~~-------------------- 55 (232)
+.++.+.+|++|+|.|.+.+.+ .+.+.|+|+. .. .+
T Consensus 13 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 92 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSL 92 (261)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCC
Confidence 5678899999999999999765 6789999842 10 01
Q ss_pred ------eEEEEeee---------ecCceeecC----CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEEeCCee
Q psy15206 56 ------RLHLAIPY---------TSPEAQVDT----PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWRRENNA 114 (232)
Q Consensus 56 ------~~~~~~~~---------~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~ 114 (232)
.|.|.... ....|.|.. +|.+....+. ..+..|+.+.|.|.+.+. |.+ .+.|++++..
T Consensus 93 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~-~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~ 171 (261)
T 2xqy_G 93 TSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 171 (261)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCC-CC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCC
T ss_pred CcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCC-ccccCCCcEEEEEEEEeEeCCCCEEEEecCCCc
Confidence 23333211 022455543 2333221222 234578999999999874 665 8999998865
Q ss_pred eCC--CC-----cEEeeCCeEEECCCCCCCCeEEEEEeEeCCC
Q psy15206 115 ILP--NG-----QTIFTGSTLQIPRITKEDRGAYYCVAQNGIG 150 (232)
Q Consensus 115 ~~~--~~-----~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~ 150 (232)
+.. .. ......+.|.|..+..+| |.|+|.+.|...
T Consensus 172 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~ 213 (261)
T 2xqy_G 172 SGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPAS 213 (261)
T ss_dssp TTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGG
T ss_pred CceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCC
Confidence 321 00 111223568888888878 999999998543
No 465
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.30 E-value=1.4e-10 Score=78.68 Aligned_cols=131 Identities=14% Similarity=0.129 Sum_probs=86.5
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEe----CcE----------------eeeeEEEEeeee------cCceeecCC
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRR----NFK----------------RLGRLHLAIPYT------SPEAQVDTP 73 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~----~~~----------------~~~~~~~~~~~~------~~~l~v~~~ 73 (232)
|++..|.+|++++|.|.+....+..+.|.- ... ..+.|.|..... .+.|+|+.+
T Consensus 6 P~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~~~~~~~l~l~~vs~~g~y~C~~~c~~~~~~~~~~l~V~~~ 85 (185)
T 1iam_A 6 PSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWT 85 (185)
T ss_dssp SSEEEEETTEEEEEEEEECSSSCSEEEEECSSCEEEECSSSSSEEEEEEEEECSCBCCEEEEECSSCEEEEECEEEEEBC
T ss_pred CCCcEEeCCCCEEEEEEccCCCCccceEEeeCCCccEeccCCceeEEEEEecCcCCEEEEEEECCCCceEEEEEEEEeCC
Confidence 677889999999999999764444466653 111 114555554211 778888887
Q ss_pred cEEecCCCCceEeecCCcEEEEeeecc-CCCC--eEEEEeCCeeeCCCCcE-EeeCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 74 PVILNNSPQLSVAKEGQSVQLECHAEG-HPIP--TISWRRENNAILPNGQT-IFTGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 74 p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~--~~~W~~~~~~~~~~~~~-~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
|......+....+.+|+.++|.|.+.| .|.. .+.|++++..+...... ...+.++.+.....+|...|+|.+.+..
T Consensus 86 P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l 165 (185)
T 1iam_A 86 PERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGAQFSCRTELDL 165 (185)
T ss_dssp CSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEEC
T ss_pred CCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCCCccccEEEEEeceeccCCCeEEEEEEecC
Confidence 776655555556889999999999988 5553 48999998876321100 0011246655555555559999999865
Q ss_pred C
Q psy15206 150 G 150 (232)
Q Consensus 150 ~ 150 (232)
+
T Consensus 166 ~ 166 (185)
T 1iam_A 166 R 166 (185)
T ss_dssp G
T ss_pred c
Confidence 4
No 466
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=4.3e-12 Score=77.26 Aligned_cols=77 Identities=25% Similarity=0.554 Sum_probs=59.8
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCeEEEEEeEeCCC-CceeeEEE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRGAYYCVAQNGIG-RGARRKIE 158 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~-~~~~~~~~ 158 (232)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++..+|.|.|.|.+.|..+ ...+..+.
T Consensus 16 ~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~~ 90 (96)
T 2ens_A 16 EPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP-----PSPVLILPEIGPQDQGTYSCVATHSSHGPQESRAVS 90 (96)
T ss_dssp ESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC-----CCSEEEEESCCTTTCEEEECEECCSSCCCEECCCEE
T ss_pred CCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC-----CCCEEEECCCCcccCEEEEEEEEeCCCCcEEEEEEE
Confidence 344566789999999999999888999999998776543 246899999999999999999999543 32334444
Q ss_pred EEE
Q psy15206 159 VKV 161 (232)
Q Consensus 159 l~v 161 (232)
+.|
T Consensus 91 v~V 93 (96)
T 2ens_A 91 ISI 93 (96)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 467
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=4.4e-12 Score=78.25 Aligned_cols=68 Identities=18% Similarity=0.256 Sum_probs=55.3
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EEEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+.+..+..|+.+.|.|.+.+ |.+.+.|+|+|..+....+ ..|.+.++...|+|.|+|.|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVE 83 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECS
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEc
Confidence 3566767777788999999999999987 7789999999987754433 357777888899999999974
No 468
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.29 E-value=2.4e-11 Score=77.60 Aligned_cols=86 Identities=17% Similarity=0.351 Sum_probs=64.1
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeC--------CCCcEEee-----CCeEEECCCCCCCCeEEEEEeE
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAIL--------PNGQTIFT-----GSTLQIPRITKEDRGAYYCVAQ 146 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~--------~~~~~~~~-----~~~l~i~~~~~~~~g~y~C~~~ 146 (232)
.+....+.+|+++.|.|.+.+.+.+.+.|++.+..+. ...++... ..+|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 86 (124)
T 3rbg_A 7 HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHY 86 (124)
T ss_dssp SEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEE
Confidence 3455678899999999999998889999998665421 22222221 3589999999999999999999
Q ss_pred eCCCCceeeEEEEEEEeccEE
Q psy15206 147 NGIGRGARRKIEVKVEFAPIV 167 (232)
Q Consensus 147 ~~~~~~~~~~~~l~v~~~p~~ 167 (232)
+. +. ....+.|.|..+|..
T Consensus 87 n~-g~-~~~~~~l~V~~~P~~ 105 (124)
T 3rbg_A 87 SD-SV-STKEVKVIVLATMKG 105 (124)
T ss_dssp SS-SE-EEEEEEEEEECC---
T ss_pred cC-CC-CcEEEEEEEEeCCCC
Confidence 98 54 667788888877753
No 469
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.29 E-value=4.6e-12 Score=80.06 Aligned_cols=70 Identities=23% Similarity=0.377 Sum_probs=54.3
Q ss_pred EeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC-------------eE-EEEE--eccccCCceE
Q psy15206 162 EFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE-------------YH-SISN--FGTSEGTTGS 225 (232)
Q Consensus 162 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~-------------~~-~~~~--~~~~~~d~g~ 225 (232)
..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+|+|..+.... .. .+.+ .++...|+|.
T Consensus 7 ~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~ 86 (117)
T 2v9t_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (117)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEE
T ss_pred cCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEE
Confidence 457888887888888999999999999999999999999998765321 11 1111 1446799999
Q ss_pred EEEecC
Q psy15206 226 LQCKVP 231 (232)
Q Consensus 226 Y~C~~~ 231 (232)
|.|.|.
T Consensus 87 Y~C~a~ 92 (117)
T 2v9t_A 87 YVCVAR 92 (117)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999874
No 470
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=3.9e-12 Score=78.21 Aligned_cols=67 Identities=15% Similarity=0.312 Sum_probs=54.3
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCC----cEEe-eC---CeEEECCCCCCCCeEEEEEeEe
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNG----QTIF-TG---STLQIPRITKEDRGAYYCVAQN 147 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~----~~~~-~~---~~l~i~~~~~~~~g~y~C~~~~ 147 (232)
.+....+.+|+.+.|.|.+.+.+ +.+.|++++..+.... ++.. .. ..|.|.++..+|.|.|+|.+.+
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 88 (101)
T 2edk_A 14 PLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG 88 (101)
T ss_dssp CCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSS
T ss_pred cCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcC
Confidence 55667888999999999998887 8999999998876543 2222 22 3699999999999999999986
No 471
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.29 E-value=5e-12 Score=77.53 Aligned_cols=60 Identities=17% Similarity=0.333 Sum_probs=50.1
Q ss_pred ceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe----------EEEEEeccccCCceEEEEecC
Q psy15206 172 TRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY----------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 172 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
....+..|+.+.|.|.+.|.|.+.+.|+|+|..+....+ ..|.+.++...|+|.|+|.|.
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 85 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVE 85 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEE
Confidence 356677899999999999999999999999988764321 267788889999999999873
No 472
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.29 E-value=6.7e-12 Score=81.65 Aligned_cols=71 Identities=17% Similarity=0.230 Sum_probs=57.3
Q ss_pred EEeccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC----------------------CCeEEEEEecc
Q psy15206 161 VEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN----------------------DEYHSISNFGT 218 (232)
Q Consensus 161 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~----------------------~~~~~~~~~~~ 218 (232)
...+|.+...+....+..|+++.|.|.+.|.|.+.+.|+++|..+.. .....|.+.++
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCC
Confidence 34688888888889999999999999999999999999997654321 13457888889
Q ss_pred ccCCceEEEEecC
Q psy15206 219 SEGTTGSLQCKVP 231 (232)
Q Consensus 219 ~~~d~g~Y~C~~~ 231 (232)
..+|+|.|.|.|.
T Consensus 98 ~~~D~G~Y~C~a~ 110 (137)
T 3qr2_A 98 VEEDTGTYECRAS 110 (137)
T ss_dssp CGGGCEEEEEEEE
T ss_pred CcccCEEEEEEEE
Confidence 9999999999874
No 473
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=2.8e-12 Score=78.85 Aligned_cols=67 Identities=9% Similarity=0.169 Sum_probs=55.0
Q ss_pred ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC-------------eEEEEEeccccCCceEEEEec
Q psy15206 164 APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE-------------YHSISNFGTSEGTTGSLQCKV 230 (232)
Q Consensus 164 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~-------------~~~~~~~~~~~~d~g~Y~C~~ 230 (232)
+|.+...+.+..+..|+.+.|.|.+.+.| +.+.|+|+|..+.... ...|.+.++..+|+|.|+|.|
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 86 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVIT 86 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEEC
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEE
Confidence 45666667778889999999999999988 8999999997765443 235777788889999999987
Q ss_pred C
Q psy15206 231 P 231 (232)
Q Consensus 231 ~ 231 (232)
.
T Consensus 87 ~ 87 (101)
T 2edk_A 87 N 87 (101)
T ss_dssp S
T ss_pred c
Confidence 4
No 474
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.29 E-value=2.4e-12 Score=74.87 Aligned_cols=59 Identities=15% Similarity=0.283 Sum_probs=47.9
Q ss_pred cceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeEEEEEecc-ccCCceEEEEecC
Q psy15206 171 STRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYHSISNFGT-SEGTTGSLQCKVP 231 (232)
Q Consensus 171 ~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~-~~~d~g~Y~C~~~ 231 (232)
|....+..|++++|.|.+.|.|. |.|+|||..+..+..-.|.+.++ ..+|+|.|+|.|.
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~~~~~L~I~~v~~~~DsG~Y~C~A~ 65 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTP 65 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTCCSSCCBCCSCCTTTTCSCEEEECS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCCCCCEEEECccCccCcCEEEEEEEc
Confidence 34445678999999999999973 99999999987554456777784 6799999999984
No 475
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.28 E-value=5.9e-11 Score=80.94 Aligned_cols=119 Identities=14% Similarity=0.224 Sum_probs=76.6
Q ss_pred CcceEeecCCeEEEEEEec--CCCCCeEEEEe--CcEee----------------------------------eeEEEEe
Q psy15206 20 TQLSVAKEGQSVQLECHAE--GHPIPTISWRR--NFKRL----------------------------------GRLHLAI 61 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~--~~p~~~~~W~~--~~~~~----------------------------------~~~~~~~ 61 (232)
+..+.+.+|++|+|.|... +.+.+.|.|++ ++..+ |.|.|..
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~ 85 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSI 85 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEE
Confidence 4567899999999999653 24567999999 54322 2444443
Q ss_pred eee--------cCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCC
Q psy15206 62 PYT--------SPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRI 133 (232)
Q Consensus 62 ~~~--------~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~ 133 (232)
... .+.|.|..+. ...... ..+..+.|.|.+.+.|.+.+.|++++..+ . .....+.+..
T Consensus 86 ~n~~g~~~~~~~~~L~V~~~~-----~~P~i~-~~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~-----~~~~~i~~~~- 152 (182)
T 1hnf_A 86 YDTKGKNVLEKIFDLKIQERV-----SKPKIS-WTCINTTLTCEVMNGTDPELNLYQDGKHL-K-----LSQRVITHKW- 152 (182)
T ss_dssp EETTSCEEEEEEEEEEEECCC-----CCCEEE-EETTTTEEEEECSSCSSCEEEEEESSCEE-E-----EESSCEEEEC-
T ss_pred EeCCCceeEEEEEEEEEcCcC-----CCCEEE-EccCcEEEEeEccCCCCCEEEEEECCEEC-C-----CCCcEEEEec-
Confidence 211 2234443210 011111 13447899999998888899999999876 1 1233444433
Q ss_pred CCCCCeEEEEEeEeCCCC
Q psy15206 134 TKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 134 ~~~~~g~y~C~~~~~~~~ 151 (232)
...|.|.|+|.+.|..+.
T Consensus 153 ~~~d~G~Y~C~a~N~~~~ 170 (182)
T 1hnf_A 153 TTSLSAKFKCTAGNKVSK 170 (182)
T ss_dssp CSCEEEEEEEEEECSSCE
T ss_pred ccCCCcEEEEEEEeCCCC
Confidence 478999999999998776
No 476
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=1.7e-11 Score=75.66 Aligned_cols=76 Identities=16% Similarity=0.318 Sum_probs=59.7
Q ss_pred eEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee----CCeEEECCCCCCCCeEEEEEeEeCCCCceeeEEEE
Q psy15206 84 SVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT----GSTLQIPRITKEDRGAYYCVAQNGIGRGARRKIEV 159 (232)
Q Consensus 84 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 159 (232)
..+.+|+.+.|.|.+.+.+.+ +.|++++..+....+.... ...|.|.++..+|.|.|+|.+.|..+ .+.+
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~-----~~~l 93 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSA-----FFGV 93 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCC-----CEEE
T ss_pred EEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceE-----EEEE
Confidence 677899999999999998888 9999999887654443322 23699999999999999999988633 4566
Q ss_pred EEEecc
Q psy15206 160 KVEFAP 165 (232)
Q Consensus 160 ~v~~~p 165 (232)
.|..+|
T Consensus 94 ~V~~~P 99 (104)
T 2e6p_A 94 TVQDPS 99 (104)
T ss_dssp EEECCC
T ss_pred EEcCCC
Confidence 666555
No 477
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=6.5e-12 Score=77.63 Aligned_cols=67 Identities=18% Similarity=0.392 Sum_probs=54.2
Q ss_pred ccEEEeccce---eeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC---------CeEEEEEeccccCCceEEEEecC
Q psy15206 164 APIVTVQSTR---IGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND---------EYHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 164 ~p~~~~~~~~---~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~---------~~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|.+...+.. ..+..|+.+.|.|.+.+.|.+ +.|+|+|..+... ....|.+.++..+|+|.|+|.+.
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 85 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTE 85 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECS
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEEC
Confidence 4555555555 678899999999999999988 9999999887643 33567778888999999999874
No 478
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.28 E-value=2.6e-11 Score=75.73 Aligned_cols=70 Identities=19% Similarity=0.280 Sum_probs=57.3
Q ss_pred EeccEEEeccceeeeeccCeEEEEEEeecCC--CCeEEEeeCCEEecCCC-----------------eEEEEEeccccCC
Q psy15206 162 EFAPIVTVQSTRIGQALHHDMDLDCHIEAYP--HPILYWAKDGEIVVNDE-----------------YHSISNFGTSEGT 222 (232)
Q Consensus 162 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~g~~~~~~~-----------------~~~~~~~~~~~~d 222 (232)
..+|.+...+....+..|+++.|.|.+.+.+ .+.+.|+|+|..+.... ...|.+.++...|
T Consensus 8 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 8 FPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 3567788888888889999999999998654 57899999998775432 3578888899999
Q ss_pred ceEEEEecC
Q psy15206 223 TGSLQCKVP 231 (232)
Q Consensus 223 ~g~Y~C~~~ 231 (232)
+|.|.|.|.
T Consensus 88 ~G~Y~C~a~ 96 (112)
T 3so5_A 88 EGXYQCVIS 96 (112)
T ss_dssp CEEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999874
No 479
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.28 E-value=6e-12 Score=77.65 Aligned_cols=64 Identities=17% Similarity=0.302 Sum_probs=52.3
Q ss_pred EEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC--e---------EEEEEeccccCCceEEEEecC
Q psy15206 167 VTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE--Y---------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 167 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~--~---------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+...+.+..+..|+++.|.|.+.+ |.+.+.|+|+|..+.... + ..|.+.++..+|+|.|+|.|.
T Consensus 10 ~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 84 (103)
T 1x44_A 10 VTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTT 84 (103)
T ss_dssp CSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEET
T ss_pred eeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEEC
Confidence 455566778889999999999977 678999999998876554 2 456677888899999999874
No 480
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.28 E-value=1.9e-11 Score=86.63 Aligned_cols=62 Identities=19% Similarity=0.329 Sum_probs=42.5
Q ss_pred cCCcEEEEeeeccC-CC-CeEEEEe-CCeeeCCCC--------cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC
Q psy15206 88 EGQSVQLECHAEGH-PI-PTISWRR-ENNAILPNG--------QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR 151 (232)
Q Consensus 88 ~g~~~~l~C~~~~~-~~-~~~~W~~-~~~~~~~~~--------~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~ 151 (232)
.|+.+.|.|.+.+. |. +.+.|++ +|..+.... ......+.|.|..... + |.|+|.+.|....
T Consensus 144 ~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 144 LHKTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp HHSCEEEEEEEEEESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred cCCcceEEEEEeeecCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 47889999999885 64 5899999 766543211 1111124688887775 4 8999999987543
No 481
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.27 E-value=4.7e-11 Score=85.05 Aligned_cols=129 Identities=19% Similarity=0.236 Sum_probs=78.4
Q ss_pred CcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe--------------------e-------------------------
Q psy15206 20 TQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR--------------------L------------------------- 54 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~--------------------~------------------------- 54 (232)
|.++.+.+|++++|.|.+.. +.+.+.|+|+... .
T Consensus 6 p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~ 84 (238)
T 1bec_A 6 PRNKVAVTGGKVTLSCQQTN-NHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQT 84 (238)
T ss_dssp CSEEEEETTCCEEEEEEESS-CCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGC
T ss_pred CCeeEEeCCCcEEEEEEeCC-CCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccC
Confidence 67788999999999999964 6789999984200 0
Q ss_pred eeEEEEeeee-----------cCceeecC------CcEEecCCCCceEeecCCcEEEEeeeccC-CCC-eEEEEeCCeee
Q psy15206 55 GRLHLAIPYT-----------SPEAQVDT------PPVILNNSPQLSVAKEGQSVQLECHAEGH-PIP-TISWRRENNAI 115 (232)
Q Consensus 55 ~~~~~~~~~~-----------~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~ 115 (232)
|.|.|..... ...|.|.. +|.+....+....+..|+.+.|.|.+.|. |.+ .+.|+++|..+
T Consensus 85 G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~ 164 (238)
T 1bec_A 85 SVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEV 164 (238)
T ss_dssp EEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEE
T ss_pred EEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEEC
Confidence 2344433211 12344433 33333222222234468999999999885 644 89999999876
Q ss_pred CCCCc-----EEeeCCe------EEECCCCCCC-CeEEEEEeEeCC
Q psy15206 116 LPNGQ-----TIFTGST------LQIPRITKED-RGAYYCVAQNGI 149 (232)
Q Consensus 116 ~~~~~-----~~~~~~~------l~i~~~~~~~-~g~y~C~~~~~~ 149 (232)
..... ....++. |.|......| .|.|+|.+.|..
T Consensus 165 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 165 HSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp CTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred CCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 54321 1112332 3333333333 578999999864
No 482
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.27 E-value=1.5e-11 Score=88.54 Aligned_cols=63 Identities=19% Similarity=0.340 Sum_probs=32.2
Q ss_pred eecCCcEEEEeeeccC-CCC-eEEEEeCCeeeCCC--------CcEEeeCCeEEECCCCCCCCeEEEEEeEeCC
Q psy15206 86 AKEGQSVQLECHAEGH-PIP-TISWRRENNAILPN--------GQTIFTGSTLQIPRITKEDRGAYYCVAQNGI 149 (232)
Q Consensus 86 ~~~g~~~~l~C~~~~~-~~~-~~~W~~~~~~~~~~--------~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 149 (232)
+..|+.+.|.|.+.+. |.+ .+.|++++..+... .......+.|.|.++...| |.|+|.+.|..
T Consensus 145 ~~~g~~v~L~C~~~g~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~ 217 (257)
T 3bn9_D 145 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKP 217 (257)
T ss_dssp --------CCCEEEEEBSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGG
T ss_pred ccCCCcEEEEEEEeeEECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecC
Confidence 4578899999999885 766 89999988653110 0011112356777777777 99999999954
No 483
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=99.27 E-value=7.2e-11 Score=94.19 Aligned_cols=146 Identities=13% Similarity=0.141 Sum_probs=93.3
Q ss_pred eecCCcEEEEeeeccCCC----CeEEEEeCCeeeCCCC---------cEEeeCCeEEECCCCCCCCeEEEEEeEeCCCC-
Q psy15206 86 AKEGQSVQLECHAEGHPI----PTISWRRENNAILPNG---------QTIFTGSTLQIPRITKEDRGAYYCVAQNGIGR- 151 (232)
Q Consensus 86 ~~~g~~~~l~C~~~~~~~----~~~~W~~~~~~~~~~~---------~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~~~- 151 (232)
+..+....|.|.+.+..+ ..+.|++++..+.... ......+.|.|......+.+.|+|.+.+....
T Consensus 355 ~~~~~~~~l~C~~~~~~p~~~~i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~~~~~~y~C~v~~~~~~~ 434 (551)
T 1ntl_A 355 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 434 (551)
T ss_pred eeeccCcceEEEEEecccCCCceEEEEEECCccccccccCCceECCCCeEEEEEeeEcCHHHccCCceEEEEEecCCCCC
Confidence 445778999999988544 4799999987653211 11112345777777777888999999986542
Q ss_pred ceeeEEEEE--EEeccEEEeccceeeeeccCeEEEEEEeecCCCC--eEEEeeCCEEec----------CCCeEEEE---
Q psy15206 152 GARRKIEVK--VEFAPIVTVQSTRIGQALHHDMDLDCHIEAYPHP--ILYWAKDGEIVV----------NDEYHSIS--- 214 (232)
Q Consensus 152 ~~~~~~~l~--v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~g~~~~----------~~~~~~~~--- 214 (232)
...+.+.+. ...+|.+.+.+.......|+.++|.|.+.|+.++ .|.|+|||..+. .+..|.+.
T Consensus 435 ~~~~~~~~~~~~~~~P~V~~~~~~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~l 514 (551)
T 1ntl_A 435 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNGSYFVYSKL 514 (551)
T ss_pred CeEEEEecCCCCCcCCceEEeCCChhhccCCceEEEEEEEEeECCCCEEEEEECCEEccCceeccceeCCCCCEEEEEEE
Confidence 223333333 3356776555433334578899999999996544 799999998753 12233332
Q ss_pred -EeccccCCceEEEEecC
Q psy15206 215 -NFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 215 -~~~~~~~d~g~Y~C~~~ 231 (232)
+......+.+.|+|.|.
T Consensus 515 ~v~~~~~~~~~~ytC~V~ 532 (551)
T 1ntl_A 515 NVQKSNWEAGNTFTCSVL 532 (551)
T ss_pred EEcHHHcCCCCeEEEEEE
Confidence 12222235789999983
No 484
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.27 E-value=3.9e-11 Score=96.37 Aligned_cols=131 Identities=21% Similarity=0.329 Sum_probs=86.9
Q ss_pred CcceEeecCCeEEEEEEe-cCCCCCeEEEEeCcE------------------------------------eeeeEEEEee
Q psy15206 20 TQLSVAKEGQSVQLECHA-EGHPIPTISWRRNFK------------------------------------RLGRLHLAIP 62 (232)
Q Consensus 20 ~~~~~~~~G~~v~l~C~~-~~~p~~~~~W~~~~~------------------------------------~~~~~~~~~~ 62 (232)
.....+.+|++++|.|.+ .+.|.+.+.|++++. +.|.|.|...
T Consensus 373 ~~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 452 (581)
T 3o3u_N 373 AQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAM 452 (581)
T ss_dssp CEEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEE
T ss_pred hcccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEE
Confidence 456778999999999999 678889999999542 1146777652
Q ss_pred e-------ecCceeecCCcEEecCCCCceEeecCCc-EEEEeeecc-CCCCeEEEEeCCeeeCCCCc-EEe---------
Q psy15206 63 Y-------TSPEAQVDTPPVILNNSPQLSVAKEGQS-VQLECHAEG-HPIPTISWRRENNAILPNGQ-TIF--------- 123 (232)
Q Consensus 63 ~-------~~~~l~v~~~p~~~~~~~~~~~~~~g~~-~~l~C~~~~-~~~~~~~W~~~~~~~~~~~~-~~~--------- 123 (232)
. ..+.|.|..+|...........+..+.. +.|.|.+.+ .|.+.+.|++++..+..... ...
T Consensus 453 n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~ 532 (581)
T 3o3u_N 453 NRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPE 532 (581)
T ss_dssp CTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTT
T ss_pred cCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCC
Confidence 2 2456666553321111111122445554 467999988 58899999999988754221 111
Q ss_pred -----eCCeEEECCCC-CCCCeEEEEEeEeCCC
Q psy15206 124 -----TGSTLQIPRIT-KEDRGAYYCVAQNGIG 150 (232)
Q Consensus 124 -----~~~~l~i~~~~-~~~~g~y~C~~~~~~~ 150 (232)
..+.|.|..+. .++.|.|+|.+.|...
T Consensus 533 ~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~ 565 (581)
T 3o3u_N 533 TGLFTLQSELMVTPARGGDPRPTFSCSFSPGLP 565 (581)
T ss_dssp TCCEEEEEEEEECCCTTSCSCCCEEEEEECSSC
T ss_pred CceEEEEEEEEEEeccccCCCceEEEEEeccCC
Confidence 12468899988 5557899999998754
No 485
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.27 E-value=9.6e-12 Score=77.43 Aligned_cols=68 Identities=12% Similarity=0.228 Sum_probs=52.7
Q ss_pred ccEEEeccceeeeeccCeEEEEEEeecCCC---CeEEEeeCCEEecC------------------CCeEEEEEeccccCC
Q psy15206 164 APIVTVQSTRIGQALHHDMDLDCHIEAYPH---PILYWAKDGEIVVN------------------DEYHSISNFGTSEGT 222 (232)
Q Consensus 164 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~~~W~~~g~~~~~------------------~~~~~~~~~~~~~~d 222 (232)
.|.+...|....+..|++++|.|.+.|.|. +.+.|+|++..... .....|.+.++...|
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 355556677788999999999999999998 89999998722110 024678888999999
Q ss_pred ceEEEEecC
Q psy15206 223 TGSLQCKVP 231 (232)
Q Consensus 223 ~g~Y~C~~~ 231 (232)
+|.|.|.|.
T Consensus 84 ~G~Y~C~a~ 92 (108)
T 3cx2_A 84 TGSYRCEVS 92 (108)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 999999874
No 486
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=2.9e-12 Score=80.77 Aligned_cols=72 Identities=13% Similarity=0.137 Sum_probs=57.9
Q ss_pred EEEEecc-EEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC----------eEEEEEeccccCCceEEE
Q psy15206 159 VKVEFAP-IVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE----------YHSISNFGTSEGTTGSLQ 227 (232)
Q Consensus 159 l~v~~~p-~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~----------~~~~~~~~~~~~d~g~Y~ 227 (232)
|.|..+| .+...+.+..+.+|+++.|.|.+.+.|.|.+.|+|+|..+..+. ...|.+.++...|+|.|+
T Consensus 7 l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (115)
T 2cr6_A 7 GLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIY 86 (115)
T ss_dssp CCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEE
T ss_pred EEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEE
Confidence 3444444 56667788889999999999999999999999999998775432 345777888899999999
Q ss_pred Eec
Q psy15206 228 CKV 230 (232)
Q Consensus 228 C~~ 230 (232)
|.+
T Consensus 87 C~~ 89 (115)
T 2cr6_A 87 FEA 89 (115)
T ss_dssp EEE
T ss_pred EEE
Confidence 974
No 487
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.27 E-value=7.2e-12 Score=76.09 Aligned_cols=65 Identities=9% Similarity=0.151 Sum_probs=52.7
Q ss_pred cEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC---------eEEEEEeccccCCceEEEEec
Q psy15206 165 PIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE---------YHSISNFGTSEGTTGSLQCKV 230 (232)
Q Consensus 165 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~---------~~~~~~~~~~~~d~g~Y~C~~ 230 (232)
+.+...+.+..+..|+.+.|.|.+ +.|.+.+.|+|+|..+..+. ...|.+.++...|+|.|.|.|
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 344455667788999999999999 88888999999998776443 345777788889999999987
No 488
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.26 E-value=4.5e-11 Score=81.71 Aligned_cols=136 Identities=11% Similarity=0.106 Sum_probs=85.8
Q ss_pred eeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeC----cEe----------------eeeEEEEeeee------cCc
Q psy15206 14 VILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRN----FKR----------------LGRLHLAIPYT------SPE 67 (232)
Q Consensus 14 ~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~----~~~----------------~~~~~~~~~~~------~~~ 67 (232)
.+... |.+..|.+|++++|.|.+....+..+.|.-. ... .+.|.|..... .+.
T Consensus 4 ~v~v~-P~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~g~~~~~~~ls~vs~d~~~~~C~~~c~~~~~~~~v~ 82 (196)
T 3bn3_B 4 WADLQ-PRVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQARGL 82 (196)
T ss_dssp CEEEE-SSEEEEETTEEEEEEEEECCSSCSEEEEECSSEEEEEEEETTEEEEEEEEECSSEECCEEEEEETTEEEEEECE
T ss_pred EEEEc-CCCcEEcCCCeEEEEEeCCCCCCCccEEEEccCCeeEccccCceEEEEEEEccCCCceEEEEECCCCceEEEEE
Confidence 44555 7778899999999999997533436676431 111 11255554221 778
Q ss_pred eeecCCcEEecCCCCceEeecCCcEEEEeeecc-CCCCe--EEEEeCCeeeCCCC---cE---EeeCCeEEECCCCCCCC
Q psy15206 68 AQVDTPPVILNNSPQLSVAKEGQSVQLECHAEG-HPIPT--ISWRRENNAILPNG---QT---IFTGSTLQIPRITKEDR 138 (232)
Q Consensus 68 l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~--~~W~~~~~~~~~~~---~~---~~~~~~l~i~~~~~~~~ 138 (232)
|.|+.+|......+....+.+|+.++|.|.+.+ .|... +.|++++..+.... .. ......+.+.....++.
T Consensus 83 l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~~~~~~~~t~~~~~~~~r~D~g 162 (196)
T 3bn3_B 83 IRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHG 162 (196)
T ss_dssp EEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTSCTTCCCEEEEEEEECCGGGTT
T ss_pred EEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccccccccccceeEEEEEeeeeccCC
Confidence 888887765443444334779999999999987 45444 79999987763111 00 00113455555555555
Q ss_pred eEEEEEeEeCCC
Q psy15206 139 GAYYCVAQNGIG 150 (232)
Q Consensus 139 g~y~C~~~~~~~ 150 (232)
..|+|.+.+..+
T Consensus 163 ~~~sC~A~l~l~ 174 (196)
T 3bn3_B 163 ANFSCRAELDLR 174 (196)
T ss_dssp CEEEEEEEEECG
T ss_pred CeEEEEEEccCC
Confidence 599999998654
No 489
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.26 E-value=1.5e-11 Score=75.35 Aligned_cols=66 Identities=6% Similarity=0.003 Sum_probs=52.4
Q ss_pred ccEEEeccce-eeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC---------eEEEEEeccccCCceEEEEec
Q psy15206 164 APIVTVQSTR-IGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE---------YHSISNFGTSEGTTGSLQCKV 230 (232)
Q Consensus 164 ~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~---------~~~~~~~~~~~~d~g~Y~C~~ 230 (232)
+|.+...+.+ ..+..|+++.|.|.+. .|.+.+.|+|+|..+.... ...|.+.++..+|+|.|.|.|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE
Confidence 5666655555 5677999999999998 6888999999998765433 345777788889999999986
No 490
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.26 E-value=7e-12 Score=77.77 Aligned_cols=67 Identities=12% Similarity=0.121 Sum_probs=55.7
Q ss_pred ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCC---------eEEEEEeccccCCceEEEEecC
Q psy15206 164 APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDE---------YHSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 164 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~---------~~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|.+...+.+..+..|+.+.|.|.+.+.|.+ +.|+|+|..+.... ...|.+.++..+|+|.|+|.|.
T Consensus 8 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (106)
T 2dlt_A 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPD 83 (106)
T ss_dssp CCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEE
T ss_pred CCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEc
Confidence 5667777888889999999999999998877 99999998765433 3467777888899999999874
No 491
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.26 E-value=2.6e-11 Score=72.82 Aligned_cols=63 Identities=21% Similarity=0.480 Sum_probs=50.4
Q ss_pred EeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEee--C--CeEEECCCCCCCCeEEEEEeEeC
Q psy15206 85 VAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFT--G--STLQIPRITKEDRGAYYCVAQNG 148 (232)
Q Consensus 85 ~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~--~--~~l~i~~~~~~~~g~y~C~~~~~ 148 (232)
...+|+.+.|.|.+.+ |.+.+.|+++|..+....+.... + ..|.|.++..+|+|.|+|.+.|.
T Consensus 17 ~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 17 HAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp ECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC
T ss_pred EEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce
Confidence 3457999999999865 77889999999988665543322 2 36999999999999999998653
No 492
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.26 E-value=9.4e-11 Score=82.11 Aligned_cols=138 Identities=21% Similarity=0.242 Sum_probs=87.1
Q ss_pred ccCCCeeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEee-----------------------------eeEEE
Q psy15206 9 VDTPPVILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRL-----------------------------GRLHL 59 (232)
Q Consensus 9 ~~~~P~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~-----------------------------~~~~~ 59 (232)
...+|.|. . +.++.+.+|++++|.|.+.+.|.+.+.|++++..+ |.|.|
T Consensus 16 ~~~~P~~~-~-p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 93 (215)
T 3mtr_A 16 HMYAPKLQ-G-PVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNC 93 (215)
T ss_dssp CCEEEEEE-C-CSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEE
T ss_pred eecCCccc-C-CceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEE
Confidence 45688884 5 66788999999999999999999999999965433 23444
Q ss_pred Eeeee------cCceeecCCcEEecCCCCce-EeecCCcEEEEeeecc----CCCC--eEEEEeCCeeeCCCCcEEe---
Q psy15206 60 AIPYT------SPEAQVDTPPVILNNSPQLS-VAKEGQSVQLECHAEG----HPIP--TISWRRENNAILPNGQTIF--- 123 (232)
Q Consensus 60 ~~~~~------~~~l~v~~~p~~~~~~~~~~-~~~~g~~~~l~C~~~~----~~~~--~~~W~~~~~~~~~~~~~~~--- 123 (232)
..... .+.|.+..+|.. +... ....+..+.+.|.... .+.. .+.|.+++...-.......
T Consensus 94 ~a~n~~g~~~~~~~l~v~~~P~~----p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~ 169 (215)
T 3mtr_A 94 TAVNRIGQESLEFILVQADTPSS----PSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEA 169 (215)
T ss_dssp EEECSSCEEEEEEEEEECCCCCC----CEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHH
T ss_pred EEEECCCceEEEEEEEECCCCCC----CcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccc
Confidence 33111 334444433321 1111 1234667888886422 2322 3778877643211000011
Q ss_pred -eCCeEEECCCCCCCCeEEEEEeEeCCCCc
Q psy15206 124 -TGSTLQIPRITKEDRGAYYCVAQNGIGRG 152 (232)
Q Consensus 124 -~~~~l~i~~~~~~~~g~y~C~~~~~~~~~ 152 (232)
....+.|.++...+.+.|.|.+.|..|..
T Consensus 170 ~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s 199 (215)
T 3mtr_A 170 SMEGIVTIVGLKPETTYAVRLAALNGKGLG 199 (215)
T ss_dssp HHHTEEEEECCCTTCEEEEEEEEEESSCBC
T ss_pred cccccEEECCCCCCCEEEEEEEEEeCCccc
Confidence 12679999999999999999999988763
No 493
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.25 E-value=1.7e-11 Score=75.59 Aligned_cols=55 Identities=16% Similarity=0.315 Sum_probs=46.2
Q ss_pred eccCeEEEEEEeecCCCCeEEEeeCCEEecCCCeE----------E----EEEeccccCCceEEEEecC
Q psy15206 177 ALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEYH----------S----ISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 177 ~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~~----------~----~~~~~~~~~d~g~Y~C~~~ 231 (232)
..++.+.|.|.+.|.|.|.+.|+|+|..+..+.+. . |.+.++..+|+|.|+|.|.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 82 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAK 82 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEE
Confidence 45788999999999999999999999988765432 1 7777888899999999874
No 494
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.25 E-value=1e-10 Score=78.98 Aligned_cols=117 Identities=11% Similarity=0.125 Sum_probs=73.2
Q ss_pred cceEeecCCeEEEEEEecCCCCCeEEEEeCcEeee-------------------------------------eEEEEee-
Q psy15206 21 QLSVAKEGQSVQLECHAEGHPIPTISWRRNFKRLG-------------------------------------RLHLAIP- 62 (232)
Q Consensus 21 ~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~~~-------------------------------------~~~~~~~- 62 (232)
..+.+.+|++|+|.|.+.. |.+.|.|+++...+. .|.|...
T Consensus 3 ~~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp EEEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTT
T ss_pred cEEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeC
Confidence 4678999999999999955 888999999654221 1222110
Q ss_pred ---eecCceeecCCcEEecCCCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEeeCCeEEECCCCCCCCe
Q psy15206 63 ---YTSPEAQVDTPPVILNNSPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIFTGSTLQIPRITKEDRG 139 (232)
Q Consensus 63 ---~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g 139 (232)
...+.|.|..++. ....... .....|.|.+.+.|.+.+.|++++..+... ....+.+. ...|.|
T Consensus 82 ~~~~~~~~L~V~~~~~-----~p~i~~~-~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~-----~~~~l~~~--~~~~~g 148 (171)
T 1ccz_A 82 ITDTMKFFLYVLEMVS-----KPMIYWE-CSNATLTCEVLEGTDVELKLYQGKEHLRSL-----RQKTMSYQ--WTNLRA 148 (171)
T ss_dssp CCSCEEEEEEEECCCC-----CCEEEEE-TTTTEEEEECSSCSSCEEEEEETTEEEEEE-----SSSEEEEE--CSCCSS
T ss_pred CCCcEEEEEEEECcCC-----CCEEEEe-cCCcEEEEEeCCCCCcEEEEEECCEECcCC-----cceEEEEe--ccCCCc
Confidence 0023344433211 0111111 112379999998888999999998776421 12234333 367889
Q ss_pred EEEEEeEeCCCC
Q psy15206 140 AYYCVAQNGIGR 151 (232)
Q Consensus 140 ~y~C~~~~~~~~ 151 (232)
.|+|.+.|..+.
T Consensus 149 ~Y~C~a~N~~~~ 160 (171)
T 1ccz_A 149 PFKCKAVNRVSQ 160 (171)
T ss_dssp CEEEEEEETTEE
T ss_pred eEEEEEEcccCc
Confidence 999999998765
No 495
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.25 E-value=7.7e-12 Score=78.53 Aligned_cols=74 Identities=14% Similarity=0.140 Sum_probs=57.6
Q ss_pred eEEEEEEEe-ccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCCCe---------EEEEEeccccCCce
Q psy15206 155 RKIEVKVEF-APIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVNDEY---------HSISNFGTSEGTTG 224 (232)
Q Consensus 155 ~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~~~---------~~~~~~~~~~~d~g 224 (232)
....|.|.. +|.+...+.+..+..|+++.|.|.+.+. |.+.|+|+|..+..+.+ ..|.+.++..+|+|
T Consensus 9 ~~~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G 86 (113)
T 2edh_A 9 TSAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAG 86 (113)
T ss_dssp CCCCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCE
T ss_pred EEEEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCE
Confidence 344555664 4577777778889999999999999775 68999999987764433 35777788889999
Q ss_pred EEEEec
Q psy15206 225 SLQCKV 230 (232)
Q Consensus 225 ~Y~C~~ 230 (232)
.|.|.|
T Consensus 87 ~Y~C~a 92 (113)
T 2edh_A 87 EYLCMC 92 (113)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999986
No 496
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=3e-12 Score=81.09 Aligned_cols=69 Identities=23% Similarity=0.385 Sum_probs=55.9
Q ss_pred eccEEEeccceeeeeccCeEEEEEEeecCCCCeEEEeeCCEEecC-CCeE------EEEEeccccCCceEEEEecC
Q psy15206 163 FAPIVTVQSTRIGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVN-DEYH------SISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 163 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~-~~~~------~~~~~~~~~~d~g~Y~C~~~ 231 (232)
.+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+|+|..+.. ..++ .|.+.++..+|+|.|+|.|.
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEE
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEE
Confidence 356666677778889999999999999999999999999877653 2222 46677888899999999874
No 497
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.25 E-value=5e-11 Score=73.43 Aligned_cols=81 Identities=21% Similarity=0.384 Sum_probs=61.0
Q ss_pred CCCceEeecCCcEEEEeeeccCCCCeEEEEeCCeeeCCCCcEEe-eCC---eEEECCCCCCCCeEEEEEeEeCCCCceee
Q psy15206 80 SPQLSVAKEGQSVQLECHAEGHPIPTISWRRENNAILPNGQTIF-TGS---TLQIPRITKEDRGAYYCVAQNGIGRGARR 155 (232)
Q Consensus 80 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~~---~l~i~~~~~~~~g~y~C~~~~~~~~~~~~ 155 (232)
.+....+.+|+.+.|.|.+.+.+.+ +.|++++..+....++.. .++ .|.|.++..+|.|.|+|.+ +. ...
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~-~~~ 87 (103)
T 2e7b_A 14 ALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCSF----GD-QTT 87 (103)
T ss_dssp CCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEEC----SS-CBC
T ss_pred cCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEEE----CC-cEE
Confidence 4566788899999999999998888 999999987755444433 233 5999999999999999983 22 334
Q ss_pred EEEEEEEeccE
Q psy15206 156 KIEVKVEFAPI 166 (232)
Q Consensus 156 ~~~l~v~~~p~ 166 (232)
.+.|.|..+|.
T Consensus 88 ~~~l~V~~~p~ 98 (103)
T 2e7b_A 88 SATLTVTALPS 98 (103)
T ss_dssp CBCEEEECCCC
T ss_pred EEEEEEEeccc
Confidence 45666666553
No 498
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.25 E-value=1.3e-11 Score=76.22 Aligned_cols=67 Identities=15% Similarity=0.205 Sum_probs=52.1
Q ss_pred ccEEEeccce-eeeeccCeEEEEEEeecCCCCeEEEeeCCEEecCC-Ce---------EEEEEeccccCCceEEEEecC
Q psy15206 164 APIVTVQSTR-IGQALHHDMDLDCHIEAYPHPILYWAKDGEIVVND-EY---------HSISNFGTSEGTTGSLQCKVP 231 (232)
Q Consensus 164 ~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~~~W~~~g~~~~~~-~~---------~~~~~~~~~~~d~g~Y~C~~~ 231 (232)
+|.+...+.+ ..+..|+++.|.|.+ +.|.+.+.|+|+|..+..+ .+ ..|.+.++..+|+|.|.|.|.
T Consensus 15 ~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 92 (104)
T 1pd6_A 15 STAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVG 92 (104)
T ss_dssp TSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEET
T ss_pred CCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEEC
Confidence 4444444333 678899999999999 7888899999999877654 32 366777888899999999873
No 499
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.25 E-value=5.9e-11 Score=85.29 Aligned_cols=135 Identities=21% Similarity=0.241 Sum_probs=80.6
Q ss_pred eeecCCCcceEeecCCeEEEEEEecCCCCCeEEEEeCcEe--------------------e-------------------
Q psy15206 14 VILNNSTQLSVAKEGQSVQLECHAEGHPIPTISWRRNFKR--------------------L------------------- 54 (232)
Q Consensus 14 ~i~~~~~~~~~~~~G~~v~l~C~~~~~p~~~~~W~~~~~~--------------------~------------------- 54 (232)
.++.. +.++.+.+|++++|.|.+.. +.+.+.|+|+... .
T Consensus 5 ~v~q~-p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~ 82 (252)
T 1oga_E 5 GITQS-PKYLFRKEGQNVTLSCEQNL-NHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTS 82 (252)
T ss_dssp CEECS-CSEEEEETTCCEEECCEECS-CCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECS
T ss_pred cceEc-CCeEEEcCCCcEEEEEEeCC-CCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECc
Confidence 34444 77889999999999999964 5789999983200 0
Q ss_pred ------eeEEEEeeee---------cCceeec------CCcEEecCCCCceEeecCCcEEEEeeeccC-CC-CeEEEEeC
Q psy15206 55 ------GRLHLAIPYT---------SPEAQVD------TPPVILNNSPQLSVAKEGQSVQLECHAEGH-PI-PTISWRRE 111 (232)
Q Consensus 55 ------~~~~~~~~~~---------~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~W~~~ 111 (232)
|.|.|..... ...|.|. .+|.+....+....+..|+.+.|.|.+.+. |. +.+.|+++
T Consensus 83 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 162 (252)
T 1oga_E 83 AQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 162 (252)
T ss_dssp CCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred CChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEEC
Confidence 2334433210 1223332 123322211222223358899999999884 65 48999999
Q ss_pred CeeeCCCCcE---------------EeeCCeEEECCCCCC-CCeEEEEEeEeCCC
Q psy15206 112 NNAILPNGQT---------------IFTGSTLQIPRITKE-DRGAYYCVAQNGIG 150 (232)
Q Consensus 112 ~~~~~~~~~~---------------~~~~~~l~i~~~~~~-~~g~y~C~~~~~~~ 150 (232)
|..+...... ....+.|.|...... +.|.|+|.+.|...
T Consensus 163 g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 217 (252)
T 1oga_E 163 GKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 217 (252)
T ss_dssp TEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 9876432111 011123666665553 56789999999653
No 500
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.25 E-value=8.2e-12 Score=79.13 Aligned_cols=67 Identities=12% Similarity=0.234 Sum_probs=52.2
Q ss_pred cEEEeccceeeeeccCeEEEEEEeecC---CCCeEEEeeCC---------EE--ecCC-------CeEEEEEeccccCCc
Q psy15206 165 PIVTVQSTRIGQALHHDMDLDCHIEAY---PHPILYWAKDG---------EI--VVND-------EYHSISNFGTSEGTT 223 (232)
Q Consensus 165 p~~~~~~~~~~~~~g~~~~l~C~~~~~---p~~~~~W~~~g---------~~--~~~~-------~~~~~~~~~~~~~d~ 223 (232)
|.+...|.+..+.+|++++|.|.+.+. |.|.|.|+|++ .. +... ..+.|.+.+++..|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 345566788889999999999999775 88999999973 11 1100 147888999999999
Q ss_pred eEEEEecC
Q psy15206 224 GSLQCKVP 231 (232)
Q Consensus 224 g~Y~C~~~ 231 (232)
|+|+|+|+
T Consensus 88 G~Y~Cevs 95 (126)
T 2dav_A 88 GNYRCEVT 95 (126)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999875
Done!