BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15208
(1027 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3D64|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei
pdb|3D64|B Chain B, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei
pdb|3GLQ|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei In Complex With 9-Beta-D-
Arabino-Furansyl-Adenine
pdb|3GLQ|B Chain B, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei In Complex With 9-Beta-D-
Arabino-Furansyl-Adenine
Length = 494
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/467 (71%), Positives = 388/467 (83%), Gaps = 3/467 (0%)
Query: 561 NSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAV 620
++ D+V+ADI L+ WGRKE+ IAETEM L+ IR+E+ +PLKGARI+GS+HMTIQT V
Sbjct: 31 SAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGV 90
Query: 621 LIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPG 680
LIETLK LGA+VRW+SCNI+STQDHAAAAI G PVFAFKGES+ +YWEF+HRIF+WP
Sbjct: 91 LIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWP- 149
Query: 681 NSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWY 740
N E ANMILDDGGDAT LL LG++AE + S+++ P +EEEV LFKSI+ L+ID WY
Sbjct: 150 --NGEFANMILDDGGDATLLLILGSKAEKDRSVIARPTNEEEVALFKSIERHLEIDGSWY 207
Query: 741 SSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGI 800
S RL IKGVTEETTTGV+RL +M K+G+L FPA NVNDSVTKSKFDNLYGCRESL+DGI
Sbjct: 208 SKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGI 267
Query: 801 KRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTME 860
KRATDVMIAGKIAV+ GYGDVGKG AQ++R L A VW+ EIDPICALQAAMEG+ VVTME
Sbjct: 268 KRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTME 327
Query: 861 YAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQV 920
YA DIFVT TGNYHVI HDHM+ M+ AIVCNIGHFD+EI+V ++Y+WENIKPQV
Sbjct: 328 YAADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQWENIKPQV 387
Query: 921 DHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYT 980
DHIIFPDGK++ILLAEGRLVNLGC TGHPS+VMS+SF NQTLAQIELF Y +Y
Sbjct: 388 DHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTRGGEYANKVYV 447
Query: 981 LPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
LPK LDEKVARL L ++ QLS+L+D QA YIGVSK GP+K D+YRY
Sbjct: 448 LPKHLDEKVARLHLARIGAQLSELSDDQAAYIGVSKAGPFKPDHYRY 494
>pdb|3N58|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|B Chain B, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|C Chain C, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|D Chain D, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
Length = 464
Score = 603 bits (1556), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/463 (63%), Positives = 361/463 (77%), Gaps = 3/463 (0%)
Query: 565 FVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIET 624
V+ DI+L+ WGRKE++IAETEM L++ REEF KS+PLKGARISGS+HMTIQTAVLIET
Sbjct: 5 MVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIET 64
Query: 625 LKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNT 684
LK LGAEVRW+SCNI+STQDHAAAAIA+ G PVFA KGE++ +YW + +IF WP +
Sbjct: 65 LKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWP---DG 121
Query: 685 EQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSRL 744
E +NMILDDGGDAT + +GA+AE +LSNP SEEE LF IK ++ +++ +
Sbjct: 122 EPSNMILDDGGDATMYILIGARAEAGEDVLSNPQSEEEEVLFAQIKKRMAATPGFFTKQR 181
Query: 745 KQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRAT 804
IKGVTEETTTGV RL ++ K+G L FPAINVNDSVTKSKFDN YGC+ESL+DGI+R T
Sbjct: 182 AAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGT 241
Query: 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKK 864
DVM+AGK+AV+ GYGDVGKGSAQ++ A+V + E+DPICALQAAM+GF VVT++ A
Sbjct: 242 DVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAAS 301
Query: 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHII 924
DI VT TGN VIT DHMR MKD IV NIGHFDNEI+V L+ KW N+KPQVD I
Sbjct: 302 TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRNLKWTNVKPQVDLIE 361
Query: 925 FPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLPKI 984
FPDGK++ILL+EGRL+NLG TGHPS+VMS+SF NQ L QIELF T Y +Y LPK
Sbjct: 362 FPDGKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTRTDAYKNEVYVLPKH 421
Query: 985 LDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
LDEKVARL L KL +L+ L+++QA YIGV+ GP+K ++YRY
Sbjct: 422 LDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 464
>pdb|3IML|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase From
Burkholderia Pseudomallei
pdb|3IML|B Chain B, Crystal Structure Of S-Adenosylmethionine Synthetase From
Burkholderia Pseudomallei
pdb|3IML|C Chain C, Crystal Structure Of S-Adenosylmethionine Synthetase From
Burkholderia Pseudomallei
pdb|3IML|D Chain D, Crystal Structure Of S-Adenosylmethionine Synthetase From
Burkholderia Pseudomallei
Length = 399
Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/377 (69%), Positives = 309/377 (81%), Gaps = 1/377 (0%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDK+ADQISDAILD I +D +RVAAETLCN L+VL+GEITT ANIDY+ I
Sbjct: 14 ESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQI 73
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
R TIK IGY+N DYGIDY+ CAVL+ Y+KQS DIAQGV+ N DQGAGDQGLMFGY
Sbjct: 74 ARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGAGDQGLMFGY 133
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
ACDETPELMP I+ SH +V+RQ+ LR++G LPWLRPDAKSQVT+RY +GKP +IDT+VL
Sbjct: 134 ACDETPELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGKPHSIDTVVL 193
Query: 368 STQHDPEIPYRSXXXXXXXXXXXXXXXXNLLK-NTRYLINPTGRFVIGGPKGDCGLTGRK 426
STQH PEI + +L+K + ++L+NPTGRFVIGGP+GDCGLTGRK
Sbjct: 194 STQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRK 253
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVDTYGGAAPHGGGAFSGKDPSK+DRSAAY GRY+AKNIVAA LA R IQ+SYAIGVA
Sbjct: 254 IIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVA 313
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+PTS+MV +FG+G++SDE +T LV++HFDLRPK II+ML+LLRPIY+KT+ YGHFGR+EP
Sbjct: 314 EPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGREEP 373
Query: 547 EFTWELTDKAEVLKNSA 563
EF+WE DKA L +A
Sbjct: 374 EFSWEAADKALALAEAA 390
>pdb|3DHY|A Chain A, Crystal Structures Of Mycobacterium Tuberculosis S-Adenosyl-
Homocysteine Hydrolase In Ternary Complex With Substrate
An Inhibitors
pdb|3DHY|B Chain B, Crystal Structures Of Mycobacterium Tuberculosis S-Adenosyl-
Homocysteine Hydrolase In Ternary Complex With Substrate
An Inhibitors
pdb|3DHY|C Chain C, Crystal Structures Of Mycobacterium Tuberculosis S-Adenosyl-
Homocysteine Hydrolase In Ternary Complex With Substrate
An Inhibitors
pdb|3DHY|D Chain D, Crystal Structures Of Mycobacterium Tuberculosis S-Adenosyl-
Homocysteine Hydrolase In Ternary Complex With Substrate
An Inhibitors
pdb|2ZIZ|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
S-adenosyl-l- Homocysteine Hydrolase In Ternary Complex
With Nad And 3- Deazaadenosine
pdb|2ZIZ|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
S-adenosyl-l- Homocysteine Hydrolase In Ternary Complex
With Nad And 3- Deazaadenosine
pdb|2ZIZ|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
S-adenosyl-l- Homocysteine Hydrolase In Ternary Complex
With Nad And 3- Deazaadenosine
pdb|2ZIZ|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis
S-adenosyl-l- Homocysteine Hydrolase In Ternary Complex
With Nad And 3- Deazaadenosine
pdb|2ZJ0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 2- Fluoroadenosine
pdb|2ZJ0|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 2- Fluoroadenosine
pdb|2ZJ0|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 2- Fluoroadenosine
pdb|2ZJ0|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 2- Fluoroadenosine
pdb|2ZJ1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 3'-Keto- Aristeromycin
pdb|2ZJ1|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 3'-Keto- Aristeromycin
pdb|2ZJ1|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 3'-Keto- Aristeromycin
pdb|2ZJ1|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And 3'-Keto- Aristeromycin
Length = 495
Score = 511 bits (1317), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/485 (54%), Positives = 341/485 (70%), Gaps = 20/485 (4%)
Query: 559 LKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQT 618
++N DF IAD++L+ +GRKE+ IAE EM L+S+R E+ + +PLKGARISGS+HMT+QT
Sbjct: 15 VRNGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQT 74
Query: 619 AVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIA---------SKGIPVFAFKGESISDYW 669
AVLIETL LGAEVRW+SCNI+STQDHAAAA+ KG+PVFA+KGE++ +YW
Sbjct: 75 AVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYW 134
Query: 670 EFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKS- 728
++ WP + ANMILDDGGDAT L+ G Q E + + P E++ +K
Sbjct: 135 WAAEQMLTWP--DPDKPANMILDDGGDATMLVLRGMQYEK--AGVVPPAEEDDPAEWKVF 190
Query: 729 ---IKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSK 785
++ + + D ++ + +KGVTEETTTGV RL + G L+FPAINVNDSVTKSK
Sbjct: 191 LNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSK 250
Query: 786 FDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPIC 845
FDN YG R SLIDGI R TD +I GK +I GYGDVGKG A+AM+ A+V + EIDPI
Sbjct: 251 FDNKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPIN 310
Query: 846 ALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEV 905
ALQA MEGF VVT+E A DI VT TGN +I +H++ MKD AI+ NIGHFDNEI++
Sbjct: 311 ALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDM 370
Query: 906 EKLKKYKWE--NIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTL 962
L++ N+KPQVD F D G+ II+L+EGRL+NLG TGHPS+VMS+SFANQT+
Sbjct: 371 AGLERSGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTI 430
Query: 963 AQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKL 1022
AQIEL+ Y +Y LPK LDEKVAR+ ++ L L+KLT +QA+Y+GV GPYK
Sbjct: 431 AQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKP 490
Query: 1023 DNYRY 1027
D+YRY
Sbjct: 491 DHYRY 495
>pdb|3CE6|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And Adenosine
pdb|3CE6|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And Adenosine
pdb|3CE6|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And Adenosine
pdb|3CE6|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis
S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex
With Nad And Adenosine
Length = 494
Score = 511 bits (1317), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/485 (54%), Positives = 341/485 (70%), Gaps = 20/485 (4%)
Query: 559 LKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQT 618
++N DF IAD++L+ +GRKE+ IAE EM L+S+R E+ + +PLKGARISGS+HMT+QT
Sbjct: 14 VRNGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQT 73
Query: 619 AVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIA---------SKGIPVFAFKGESISDYW 669
AVLIETL LGAEVRW+SCNI+STQDHAAAA+ KG+PVFA+KGE++ +YW
Sbjct: 74 AVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYW 133
Query: 670 EFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKS- 728
++ WP + ANMILDDGGDAT L+ G Q E + + P E++ +K
Sbjct: 134 WAAEQMLTWP--DPDKPANMILDDGGDATMLVLRGMQYEK--AGVVPPAEEDDPAEWKVF 189
Query: 729 ---IKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSK 785
++ + + D ++ + +KGVTEETTTGV RL + G L+FPAINVNDSVTKSK
Sbjct: 190 LNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSK 249
Query: 786 FDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPIC 845
FDN YG R SLIDGI R TD +I GK +I GYGDVGKG A+AM+ A+V + EIDPI
Sbjct: 250 FDNKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPIN 309
Query: 846 ALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEV 905
ALQA MEGF VVT+E A DI VT TGN +I +H++ MKD AI+ NIGHFDNEI++
Sbjct: 310 ALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDM 369
Query: 906 EKLKKYKWE--NIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTL 962
L++ N+KPQVD F D G+ II+L+EGRL+NLG TGHPS+VMS+SFANQT+
Sbjct: 370 AGLERSGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTI 429
Query: 963 AQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKL 1022
AQIEL+ Y +Y LPK LDEKVAR+ ++ L L+KLT +QA+Y+GV GPYK
Sbjct: 430 AQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKP 489
Query: 1023 DNYRY 1027
D+YRY
Sbjct: 490 DHYRY 494
>pdb|1B3R|A Chain A, Rat Liver S-Adenosylhomocystein Hydrolase
pdb|1B3R|B Chain B, Rat Liver S-Adenosylhomocystein Hydrolase
pdb|1B3R|C Chain C, Rat Liver S-Adenosylhomocystein Hydrolase
pdb|1B3R|D Chain D, Rat Liver S-Adenosylhomocystein Hydrolase
pdb|1K0U|A Chain A, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|B Chain B, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|C Chain C, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|D Chain D, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|E Chain E, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|F Chain F, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|G Chain G, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|H Chain H, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1KY4|A Chain A, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY4|B Chain B, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY4|C Chain C, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY4|D Chain D, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|2H5L|A Chain A, S-adenosylhomocysteine Hydrolase Containing Nad And 3-deaza-
D-eritadenine
pdb|2H5L|B Chain B, S-adenosylhomocysteine Hydrolase Containing Nad And 3-deaza-
D-eritadenine
pdb|2H5L|C Chain C, S-adenosylhomocysteine Hydrolase Containing Nad And 3-deaza-
D-eritadenine
pdb|2H5L|D Chain D, S-adenosylhomocysteine Hydrolase Containing Nad And 3-deaza-
D-eritadenine
pdb|2H5L|E Chain E, S-adenosylhomocysteine Hydrolase Containing Nad And 3-deaza-
D-eritadenine
pdb|2H5L|F Chain F, S-adenosylhomocysteine Hydrolase Containing Nad And 3-deaza-
D-eritadenine
pdb|2H5L|G Chain G, S-adenosylhomocysteine Hydrolase Containing Nad And 3-deaza-
D-eritadenine
pdb|2H5L|H Chain H, S-adenosylhomocysteine Hydrolase Containing Nad And 3-deaza-
D-eritadenine
Length = 431
Score = 503 bits (1295), Expect = e-142, Method: Compositional matrix adjust.
Identities = 270/468 (57%), Positives = 325/468 (69%), Gaps = 47/468 (10%)
Query: 565 FVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIET 624
+ +ADI L+ WGRK ++IAE EM L+ +RE + SKPLKGARI+G +HMT++TAVLIET
Sbjct: 6 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIET 65
Query: 625 LKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDY-WEFNHRIF--DWPGN 681
L LGAEVRWSSCNI+STQDHAAAAIA GIPVFA+KGE+ +Y W + D P
Sbjct: 66 LVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHFKDGP-- 123
Query: 682 SNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYS 741
NMILDDGGD T L+H +
Sbjct: 124 -----LNMILDDGGDLTNLIHTK-----------------------------------HP 143
Query: 742 SRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801
L I+G++EETTTGV+ L +M G L PAINVNDSVTKSKFDNLYGCRESLIDGIK
Sbjct: 144 QLLSGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIK 203
Query: 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861
RATDVMIAGK+AV+ GYGDVGKG AQA+R A+V I EIDPI ALQAAMEG+ V TM+
Sbjct: 204 RATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDE 263
Query: 862 AKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWE--NIKPQ 919
A K G+IFVT TG +I H MKD AIVCNIGHFD EI+V+ L + E NIKPQ
Sbjct: 264 ACKEGNIFVTTTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQ 323
Query: 920 VDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIY 979
VD + +G +IILLAEGRLVNLGC GHPS+VMS+SF NQ +AQIEL+ + YP+G++
Sbjct: 324 VDRYLLKNGHRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDKYPVGVH 383
Query: 980 TLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
LPK LDE VA L KLNV+L+KLT++QA+Y+G+ NGP+K D+YRY
Sbjct: 384 FLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPINGPFKPDHYRY 431
>pdb|3NJ4|A Chain A, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
pdb|3NJ4|B Chain B, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
pdb|3NJ4|C Chain C, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
pdb|3NJ4|D Chain D, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
Length = 435
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/468 (57%), Positives = 327/468 (69%), Gaps = 47/468 (10%)
Query: 565 FVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIET 624
+ +ADI L+ WGRK ++IAE EM L+ +RE + SKPLKGARI+G +HMT++TAVLIET
Sbjct: 10 YKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIET 69
Query: 625 LKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDY-WEFNHRIF--DWPGN 681
L LGAEV+WSSCNI+STQDHAAAAIA GIPV+A+KGE+ +Y W ++ D P
Sbjct: 70 LVTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDGP-- 127
Query: 682 SNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYS 741
NMILDDGGD T L+H Y
Sbjct: 128 -----LNMILDDGGDLTNLIHTK-----------------------------------YP 147
Query: 742 SRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801
L I+G++EETTTGV+ L +M G L PAINVNDSVTKSKFDNLYGCRESLIDGIK
Sbjct: 148 QLLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIK 207
Query: 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861
RATDVMIAGK+AV+ GYGDVGKG AQA+R A+V I EIDPI ALQAAMEG+ V TM+
Sbjct: 208 RATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDE 267
Query: 862 AKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWE--NIKPQ 919
A + G+IFVT TG +I H MKD AIVCNIGHFD EI+V+ L + E NIKPQ
Sbjct: 268 ACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQ 327
Query: 920 VDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIY 979
VD +G++IILLAEGRLVNLGC GHPS+VMS+SF NQ +AQIEL+ + YP+G++
Sbjct: 328 VDRYRLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDKYPVGVH 387
Query: 980 TLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
LPK LDE VA L KLNV+L+KLT++QA+Y+G+S +GP+K D+YRY
Sbjct: 388 FLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY 435
>pdb|1LI4|A Chain A, Human S-Adenosylhomocysteine Hydrolase Complexed With
Neplanocin
Length = 432
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/468 (57%), Positives = 327/468 (69%), Gaps = 47/468 (10%)
Query: 565 FVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIET 624
+ +ADI L+ WGRK ++IAE EM L+ +RE + SKPLKGARI+G +HMT++TAVLIET
Sbjct: 7 YKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIET 66
Query: 625 LKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDY-WEFNHRIF--DWPGN 681
L LGAEV+WSSCNI+STQDHAAAAIA GIPV+A+KGE+ +Y W ++ D P
Sbjct: 67 LVTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDGP-- 124
Query: 682 SNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYS 741
NMILDDGGD T L+H Y
Sbjct: 125 -----LNMILDDGGDLTNLIHTK-----------------------------------YP 144
Query: 742 SRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801
L I+G++EETTTGV+ L +M G L PAINVNDSVTKSKFDNLYGCRESLIDGIK
Sbjct: 145 QLLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIK 204
Query: 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861
RATDVMIAGK+AV+ GYGDVGKG AQA+R A+V I EIDPI ALQAAMEG+ V TM+
Sbjct: 205 RATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDE 264
Query: 862 AKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWE--NIKPQ 919
A + G+IFVT TG +I H MKD AIVCNIGHFD EI+V+ L + E NIKPQ
Sbjct: 265 ACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQ 324
Query: 920 VDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIY 979
VD +G++IILLAEGRLVNLGC GHPS+VMS+SF NQ +AQIEL+ + YP+G++
Sbjct: 325 VDRYRLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDKYPVGVH 384
Query: 980 TLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
LPK LDE VA L KLNV+L+KLT++QA+Y+G+S +GP+K D+YRY
Sbjct: 385 FLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY 432
>pdb|1D4F|A Chain A, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
pdb|1D4F|B Chain B, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
pdb|1D4F|C Chain C, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
pdb|1D4F|D Chain D, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
pdb|1KY5|A Chain A, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY5|B Chain B, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY5|C Chain C, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY5|D Chain D, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
Length = 431
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/468 (57%), Positives = 325/468 (69%), Gaps = 47/468 (10%)
Query: 565 FVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIET 624
+ +ADI L+ WGRK ++IAE EM L+ +RE + SKPLKGARI+G +HMT++TAVLIET
Sbjct: 6 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIET 65
Query: 625 LKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDY-WEFNHRIF--DWPGN 681
L LGAEVRWSSCNI+STQDHAAAAIA GIPVFA+KGE+ +Y W + D P
Sbjct: 66 LVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHFKDGP-- 123
Query: 682 SNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYS 741
NMILDDGGD T L+H +
Sbjct: 124 -----LNMILDDGGDLTNLIHTK-----------------------------------HP 143
Query: 742 SRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801
L I+G++EETTTGV+ L +M G L PAINVNDSVTKSKFDNLYGCRESLIDGIK
Sbjct: 144 QLLSGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIK 203
Query: 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861
RATDVMIAGK+AV+ GYGDVGKG AQA+R A+V I EI+PI ALQAAMEG+ V TM+
Sbjct: 204 RATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIEPINALQAAMEGYEVTTMDE 263
Query: 862 AKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWE--NIKPQ 919
A K G+IFVT TG +I H MKD AIVCNIGHFD EI+V+ L + E NIKPQ
Sbjct: 264 ACKEGNIFVTTTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQ 323
Query: 920 VDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIY 979
VD + +G +IILLAEGRLVNLGC GHPS+VMS+SF NQ +AQIEL+ + YP+G++
Sbjct: 324 VDRYLLKNGHRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDKYPVGVH 383
Query: 980 TLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
LPK LDE VA L KLNV+L+KLT++QA+Y+G+ NGP+K D+YRY
Sbjct: 384 FLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPINGPFKPDHYRY 431
>pdb|1XWF|A Chain A, K185n Mutated S-adenosylhomocysteine Hydrolase
pdb|1XWF|B Chain B, K185n Mutated S-adenosylhomocysteine Hydrolase
pdb|1XWF|C Chain C, K185n Mutated S-adenosylhomocysteine Hydrolase
pdb|1XWF|D Chain D, K185n Mutated S-adenosylhomocysteine Hydrolase
Length = 431
Score = 501 bits (1289), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/468 (57%), Positives = 324/468 (69%), Gaps = 47/468 (10%)
Query: 565 FVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIET 624
+ +ADI L+ WGRK ++IAE EM L+ +RE + SKPLKGARI+G +HMT++TAVLIET
Sbjct: 6 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIET 65
Query: 625 LKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDY-WEFNHRIF--DWPGN 681
L LGAEVRWSSCNI+STQDHAAAAIA GIPVFA+KGE+ +Y W + D P
Sbjct: 66 LVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHFKDGP-- 123
Query: 682 SNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYS 741
NMILDDGGD T L+H +
Sbjct: 124 -----LNMILDDGGDLTNLIHTK-----------------------------------HP 143
Query: 742 SRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801
L I+G++EETTTGV+ L +M G L PAINVNDSVT SKFDNLYGCRESLIDGIK
Sbjct: 144 QLLSGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTNSKFDNLYGCRESLIDGIK 203
Query: 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861
RATDVMIAGK+AV+ GYGDVGKG AQA+R A+V I EIDPI ALQAAMEG+ V TM+
Sbjct: 204 RATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDE 263
Query: 862 AKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWE--NIKPQ 919
A K G+IFVT TG +I H MKD AIVCNIGHFD EI+V+ L + E NIKPQ
Sbjct: 264 ACKEGNIFVTTTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQ 323
Query: 920 VDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIY 979
VD + +G +IILLAEGRLVNLGC GHPS+VMS+SF NQ +AQIEL+ + YP+G++
Sbjct: 324 VDRYLLKNGHRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDKYPVGVH 383
Query: 980 TLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
LPK LDE VA L KLNV+L+KLT++QA+Y+G+ NGP+K D+YRY
Sbjct: 384 FLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPINGPFKPDHYRY 431
>pdb|1V8B|A Chain A, Crystal Structure Of A Hydrolase
pdb|1V8B|B Chain B, Crystal Structure Of A Hydrolase
pdb|1V8B|C Chain C, Crystal Structure Of A Hydrolase
pdb|1V8B|D Chain D, Crystal Structure Of A Hydrolase
Length = 479
Score = 501 bits (1289), Expect = e-141, Method: Compositional matrix adjust.
Identities = 251/473 (53%), Positives = 343/473 (72%), Gaps = 13/473 (2%)
Query: 567 IADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLK 626
+ DI+L+ +G+ ++EI+E EM L+ IREE+ K +PLK A+I+G +HMT++ A+LIETL+
Sbjct: 8 VKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIETLQ 67
Query: 627 CLGAEVRWSSCNIYSTQDHAAAAIAS-KGIPVFAFKGESISDYWEFNHRIFDWPGNSNTE 685
LGA++RW SCNIYST D+AAAA+++ + + VFA+K E++ +YW W G+ +
Sbjct: 68 KLGAQIRWCSCNIYSTADYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTW-GDGDDN 126
Query: 686 QANMILDDGGDATFLLHLGAQAE---NNISILSNP---CSEEEVCLFKSIKNKLKIDSKW 739
+MI+DDGGDAT L+H G + E +IL +P +EEE C +KN + + K
Sbjct: 127 GPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKAKNEEERCFLTLLKNSILKNPKK 186
Query: 740 YSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG 799
+++ K+I GV+EETTTGV RL++M K+ +L F AINVND+VTK K+DN+YGCR SL DG
Sbjct: 187 WTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSLPDG 246
Query: 800 IKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTM 859
+ RATD +I+GKI VI GYGDVGKG A +M+ L A+V+I EIDPICA+QA MEGF VVT+
Sbjct: 247 LMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTL 306
Query: 860 EYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKW---ENI 916
+ GD F+TCTGN VI +H+ MK+ A+V NIGHFD+EI+V +L YK EN+
Sbjct: 307 DEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENV 366
Query: 917 KPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNN--TSNY 974
KPQVD I P+G KII+LA GRL+NLGC TGHP++VMS SF NQT AQ++L+ N T+ Y
Sbjct: 367 KPQVDRITLPNGNKIIVLARGRLLNLGCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKY 426
Query: 975 PIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
+Y LPK LDEKVA LKKLN L++L D Q +++GV+K+GP+K + YRY
Sbjct: 427 ENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 479
>pdb|3OND|A Chain A, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Adenosine
pdb|3OND|B Chain B, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Adenosine
pdb|3ONE|A Chain A, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Adenine
pdb|3ONE|B Chain B, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Adenine
pdb|3ONF|A Chain A, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Cordycepin
pdb|3ONF|B Chain B, Crystal Structure Of Lupinus Luteus
S-Adenosyl-L-Homocysteine Hydrolase In Complex With
Cordycepin
Length = 488
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 267/477 (55%), Positives = 329/477 (68%), Gaps = 17/477 (3%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
++ + D++ + +GR EIE+AE EM L++ R EF S+P KGA+I+GS+HMTIQTAVLIE
Sbjct: 16 EYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIE 75
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDW-PGNS 682
TL LGAEVRW SCNI+STQDHAAAAIA VFA+KGE++ +YW R DW PG
Sbjct: 76 TLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGG 135
Query: 683 NTEQANMILDDGGDATFLLHLGAQAEN---NISILSNPCSEEEV---CLFKSIKNKLKID 736
++I+DDGGD T L+H G +AE +P S + + IK LK D
Sbjct: 136 ----PDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDSTDNAEFKIVLSIIKEGLKTD 191
Query: 737 SKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESL 796
K Y ++ GV+EETTTGV RL +M G L FPAINVNDSVTKSKFDNLYGCR SL
Sbjct: 192 PKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSL 251
Query: 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV 856
DG+ RATDVMIAGK+AV+ GYGDVGKG A A++ A+V + EIDPICALQA MEG V
Sbjct: 252 PDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQV 311
Query: 857 VTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY---KW 913
+T+E DIFVT TGN +I DHM+ MK+ AIVCNIGHFDNEI++ L+ + K
Sbjct: 312 LTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKR 371
Query: 914 ENIKPQVDHIIFPDGKK-IILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTS 972
IKPQ D +FP+ II+LAEGRL+NLGC TGHPS+VMS SF NQ +AQ+EL+N S
Sbjct: 372 ITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKS 431
Query: 973 N--YPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
+ Y +Y LPK LDEKVA L L+KL +L+KL+ QA YI V GPYK +YRY
Sbjct: 432 SGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKPFHYRY 488
>pdb|3H9U|A Chain A, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma
Brucei
pdb|3H9U|B Chain B, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma
Brucei
pdb|3H9U|C Chain C, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma
Brucei
pdb|3H9U|D Chain D, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma
Brucei
Length = 436
Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/472 (55%), Positives = 324/472 (68%), Gaps = 47/472 (9%)
Query: 565 FVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIET 624
+ + DI+L++WGR+E+E+AE EM L+ +R E+ SKPLKGA+I+G +HMT+QTAVLIET
Sbjct: 3 YKVRDISLAEWGRRELELAENEMPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLIET 62
Query: 625 LKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDY-WEFNHRIFDWPGNSN 683
L LGAEVRW+SCNI+STQDHAAAAIA +GIPVFA+KGE+ +Y W + + G+
Sbjct: 63 LVELGAEVRWASCNIFSTQDHAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGDG- 121
Query: 684 TEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSR 743
NM+LDDGGD T + + + C E +D K Y
Sbjct: 122 --YPNMLLDDGGDLT-------------NYVLDECKE--------------LDGKIY--- 149
Query: 744 LKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803
GV+EETTTGV L + + GKL+ PA+NVNDSVTKSKFDNLYGCRESL+DGIKRA
Sbjct: 150 -----GVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKRA 204
Query: 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAK 863
TDVMIAGK A + GYGDVGKG A A+R A+V + E+DPI ALQAAMEG+ V+ +E
Sbjct: 205 TDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVV 264
Query: 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWE--NIKPQVD 921
+ IFVT TGN +IT +H M+D AIVCNIGHFD EI+V LK E +KPQVD
Sbjct: 265 EEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVKPQVD 324
Query: 922 HIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNN--TSNYPIG-- 977
+G+ IILLAEGRLVNLGC +GHPS+VMS+SF NQ LAQIEL+ N T YP G
Sbjct: 325 RYTMANGRHIILLAEGRLVNLGCASGHPSFVMSNSFCNQVLAQIELWTNRDTGKYPRGAK 384
Query: 978 --IYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
+Y LPK LDEKVA L L KL +L+KLT +QA+YI +GP+K D+YRY
Sbjct: 385 AQVYFLPKKLDEKVAALHLGKLGAKLTKLTPKQAEYINCPVDGPFKPDHYRY 436
>pdb|3G1U|A Chain A, Crystal Structure Of Leishmania Major S-
Adenosylhomocysteine Hydrolase
pdb|3G1U|B Chain B, Crystal Structure Of Leishmania Major S-
Adenosylhomocysteine Hydrolase
pdb|3G1U|C Chain C, Crystal Structure Of Leishmania Major S-
Adenosylhomocysteine Hydrolase
pdb|3G1U|D Chain D, Crystal Structure Of Leishmania Major S-
Adenosylhomocysteine Hydrolase
Length = 437
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/474 (54%), Positives = 320/474 (67%), Gaps = 47/474 (9%)
Query: 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLI 622
AD+ + DI+L++WGRK IE+AE EM L+ +R E+ S+PLKGA+I+G +HMT+QTAVLI
Sbjct: 2 ADYKVKDISLAEWGRKAIELAENEMPGLMELRREYGPSQPLKGAKIAGCLHMTVQTAVLI 61
Query: 623 ETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDY-WEFNHRIFDWPGN 681
ETLK LGAE+RWSSCNI+STQD+AAAAIA G+PVFA+KGE+ +Y W + + G+
Sbjct: 62 ETLKALGAELRWSSCNIFSTQDNAAAAIAKTGVPVFAWKGETDEEYEWCIAQTVKGFSGD 121
Query: 682 SNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYS 741
NMILDDGGD T L+ ID Y
Sbjct: 122 G---LPNMILDDGGDLTNLV---------------------------------IDR--YP 143
Query: 742 SRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801
+ +I G++EETTTGV L + +G L AINVNDSVTKSKFDNLYGCRESL+DGIK
Sbjct: 144 ELVPKIFGISEETTTGVKNLYKRLSKGNLPISAINVNDSVTKSKFDNLYGCRESLVDGIK 203
Query: 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861
RATDVMIAGK + GYGDVGKG A A+RA A+V + E+DPI ALQA+MEG+ V +E
Sbjct: 204 RATDVMIAGKTCCVCGYGDVGKGCAAALRAFGARVVVTEVDPINALQASMEGYQVALVED 263
Query: 862 AKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWEN--IKPQ 919
IFVT TGN +IT DH M+D AIVCNIGHFD EI+V L+ E+ IKPQ
Sbjct: 264 VMADAHIFVTTTGNDDIITSDHFPHMRDDAIVCNIGHFDTEIQVGWLEANAKEHVEIKPQ 323
Query: 920 VDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSN--YP-- 975
VD +G+ IILLA+GRLVNLGC +GHPS+VMS+SF NQ LAQIEL++N N YP
Sbjct: 324 VDRYTMENGRHIILLAKGRLVNLGCASGHPSFVMSNSFTNQVLAQIELWSNRDNGKYPRG 383
Query: 976 --IGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
G++ LPK LDEKVA L L + +L+KLT +QA+YI NGP+K D+YRY
Sbjct: 384 DKAGVFFLPKALDEKVAALHLAHVGAKLTKLTPKQAEYINCPVNGPFKPDHYRY 437
>pdb|1FUG|A Chain A, S-adenosylmethionine Synthetase
pdb|1FUG|B Chain B, S-adenosylmethionine Synthetase
pdb|1P7L|A Chain A, S-Adenosylmethionine Synthetase Complexed With Amppnp And
Met.
pdb|1P7L|B Chain B, S-Adenosylmethionine Synthetase Complexed With Amppnp And
Met.
pdb|1P7L|C Chain C, S-Adenosylmethionine Synthetase Complexed With Amppnp And
Met.
pdb|1P7L|D Chain D, S-Adenosylmethionine Synthetase Complexed With Amppnp And
Met.
pdb|1RG9|A Chain A, S-adenosylmethionine Synthetase Complexed With Sam And
Ppnp
pdb|1RG9|B Chain B, S-adenosylmethionine Synthetase Complexed With Sam And
Ppnp
pdb|1RG9|C Chain C, S-adenosylmethionine Synthetase Complexed With Sam And
Ppnp
pdb|1RG9|D Chain D, S-adenosylmethionine Synthetase Complexed With Sam And
Ppnp
pdb|1MXA|A Chain A, S-Adenosylmethionine Synthetase With Ppi
pdb|1MXB|A Chain A, S-Adenosylmethionine Synthetase With Adp
pdb|1MXC|A Chain A, S-adenosylmethionine Synthetase With 8-br-adp
pdb|1XRA|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase
pdb|1XRC|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase
Length = 383
Score = 477 bits (1228), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/377 (62%), Positives = 285/377 (75%), Gaps = 5/377 (1%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDKIADQISDA+LD I +D KARVA ET ++++ GEITT A +D I
Sbjct: 8 ESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEI 67
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
R T+++IGY + D G D SCAVL KQS DI QGV+ + L +QGAGDQGLMFGY
Sbjct: 68 TRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPL--EQGAGDQGLMFGY 125
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
A +ET LMP+ I Y+H +V+RQ+E+RKNG LPWLRPDAKSQVT +YD+GK V ID +VL
Sbjct: 126 ATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVL 185
Query: 368 STQHDPEIPYRSXXXXXXXXXXXXXXXXNLLKN-TRYLINPTGRFVIGGPKGDCGLTGRK 426
STQH EI +S L + T++ INPTGRFVIGGP GDCGLTGRK
Sbjct: 186 STQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRK 245
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVDTYGG A HGGGAFSGKDPSK+DRSAAY RY+AKNIVAA LA RC+IQ+SYAIGVA
Sbjct: 246 IIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVA 305
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+PTSIMV +FG+ K+ E+LT+LV++ FDLRP +I+ML+LL PIYK+T+ YGHFGR+
Sbjct: 306 EPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGRE-- 363
Query: 547 EFTWELTDKAEVLKNSA 563
F WE TDKA++L+++A
Sbjct: 364 HFPWEKTDKAQLLRDAA 380
>pdb|1A7A|A Chain A, Structure Of Human Placental S-adenosylhomocysteine
Hydrolase: Determination Of A 30 Selenium Atom
Substructure From Data At A Single Wavelength
pdb|1A7A|B Chain B, Structure Of Human Placental S-adenosylhomocysteine
Hydrolase: Determination Of A 30 Selenium Atom
Substructure From Data At A Single Wavelength
Length = 432
Score = 471 bits (1212), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/468 (55%), Positives = 314/468 (67%), Gaps = 47/468 (10%)
Query: 565 FVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIET 624
+ +ADI L+ WGRK ++IAE E L RE + SKPLKGARI+G +H T++TAVLIET
Sbjct: 7 YKVADIGLAAWGRKALDIAENEXPGLXRXRERYSASKPLKGARIAGCLHXTVETAVLIET 66
Query: 625 LKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDY-WEFNHRIF--DWPGN 681
L LGAEV+WSSCNI+STQ+HAAAAIA GIPV+A+KGE+ +Y W ++ D P
Sbjct: 67 LVTLGAEVQWSSCNIFSTQNHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDGP-- 124
Query: 682 SNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYS 741
N ILDDGGD T L+H Y
Sbjct: 125 -----LNXILDDGGDLTNLIHTK-----------------------------------YP 144
Query: 742 SRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801
L I+G++EETTTGV+ L + G L PAINVNDSVTKSKFDNLYGCRESLIDGIK
Sbjct: 145 QLLPGIRGISEETTTGVHNLYKXXANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIK 204
Query: 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861
RATDV IAGK+AV+ GYGDVGKG AQA+R A+V I EIDPI ALQAA EG+ V T +
Sbjct: 205 RATDVXIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAXEGYEVTTXDE 264
Query: 862 AKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWE--NIKPQ 919
A + G+IFVT TG +I H KD AIVCNIGHFD EI+V+ L + E NIKPQ
Sbjct: 265 ACQEGNIFVTTTGCIDIILGRHFEQXKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQ 324
Query: 920 VDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIY 979
VD +G++IILLAEGRLVNLGC GHPS+V S+SF NQ AQIEL+ + YP+G++
Sbjct: 325 VDRYRLKNGRRIILLAEGRLVNLGCAXGHPSFVXSNSFTNQVXAQIELWTHPDKYPVGVH 384
Query: 980 TLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
LPK LDE VA L KLNV+L+KLT++QA+Y+G S +GP+K D+YRY
Sbjct: 385 FLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGXSCDGPFKPDHYRY 432
>pdb|3GVP|A Chain A, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3
pdb|3GVP|B Chain B, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3
pdb|3GVP|C Chain C, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3
pdb|3GVP|D Chain D, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3
Length = 435
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/465 (48%), Positives = 306/465 (65%), Gaps = 43/465 (9%)
Query: 560 KNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTA 619
K S+DF + +I +++GR+EIEIAE EM +L+++R+ KPL GA+I G H+T QTA
Sbjct: 9 KGSSDFCVKNIKQAEFGRREIEIAEQEMPALMALRKRAQGEKPLAGAKIVGCTHITAQTA 68
Query: 620 VLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWP 679
VL+ETL LGA+ RW++CNIYST + AAA+A G PVFA+KGES D+W R +
Sbjct: 69 VLMETLGALGAQCRWAACNIYSTLNEVAAALAESGFPVFAWKGESEDDFWWCIDRCVNVE 128
Query: 680 GNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKW 739
G Q NMILDDGGD T ++ K
Sbjct: 129 G----WQPNMILDDGGDLTHWIY-----------------------------------KK 149
Query: 740 YSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG 799
Y + K+IKG+ EE+ TGV+RL ++ K GKL PA+NVNDSVTK KFDNLY CRES++DG
Sbjct: 150 YPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDG 209
Query: 800 IKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTM 859
+KR TD+M GK V+ GYG+VGKG A++A+ + V++ EIDPICALQA M+GF +V +
Sbjct: 210 LKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKL 269
Query: 860 EYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK--KYKWENIK 917
+ DI +TCTGN +V+T +H+ MK+ IVCN+GH + EI+V L+ + WE ++
Sbjct: 270 NEVIRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVR 329
Query: 918 PQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNN-TSNYPI 976
QVDH+I+PDGK+I+LLAEGRL+NL C T P++V+S + Q LA IEL+N Y
Sbjct: 330 SQVDHVIWPDGKRIVLLAEGRLLNLSCST-VPTFVLSITATTQALALIELYNAPEGRYKQ 388
Query: 977 GIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYK 1021
+Y LPK +DE VA L L + L++LTD+QAKY+G++KNGP+K
Sbjct: 389 DVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFK 433
>pdb|1XRB|A Chain A, S-adenosylmethionine Synthetase (mat, Atp: L-methionine S-
Adenosyltransferase, E.c.2.5.1.6) In Which Met Residues
Are Replaced With Selenomethionine Residues (mse)
Length = 383
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/377 (61%), Positives = 281/377 (74%), Gaps = 5/377 (1%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDKIADQISDA+LD I +D KARVA ET +++ GEITT A +D I
Sbjct: 8 ESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGXVLVGGEITTSAWVDIEEI 67
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
R T+++IGY + D G D SCAVL KQS DI QGV+ + L +QGAGDQGL FGY
Sbjct: 68 TRNTVREIGYVHSDXGFDANSCAVLSAIGKQSPDINQGVDRADPL--EQGAGDQGLXFGY 125
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
A +ET L P+ I Y+H +V+RQ+E+RKNG LPWLRPDAKSQVT +YD+GK V ID +VL
Sbjct: 126 ATNETDVLXPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVL 185
Query: 368 STQHDPEIPYRSXXXXXXXXXXXXXXXXNLLKN-TRYLINPTGRFVIGGPKGDCGLTGRK 426
STQH EI +S L + T++ INPTGRFVIGGP GDCGLTGRK
Sbjct: 186 STQHSEEIDQKSLQEAVXEEIIKPILPAEWLTSATKFFINPTGRFVIGGPXGDCGLTGRK 245
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVDTYGG A HGGGAFSGKDPSK+DRSAAY RY+AKNIVAA LA RC+IQ+SYAIGVA
Sbjct: 246 IIVDTYGGXARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVA 305
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+PTSI V +FG+ K+ E+LT+LV++ FDLRP +I+ L+LL PIYK+T+ YGHFGR+
Sbjct: 306 EPTSIXVETFGTEKVPSEQLTLLVREFFDLRPYGLIQXLDLLHPIYKETAAYGHFGRE-- 363
Query: 547 EFTWELTDKAEVLKNSA 563
F WE TDKA++L+++A
Sbjct: 364 HFPWEKTDKAQLLRDAA 380
>pdb|3MTG|A Chain A, Crystal Structure Of Human S-Adenosyl Homocysteine Hydrolase
Protein
pdb|3MTG|B Chain B, Crystal Structure Of Human S-Adenosyl Homocysteine Hydrolase
Protein
Length = 444
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/471 (49%), Positives = 310/471 (65%), Gaps = 43/471 (9%)
Query: 560 KNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTA 619
K S++F + +I +++GR+EIEIAE +M +LIS+R+ KPL GA+I G H+T QTA
Sbjct: 14 KGSSNFCVKNIKQAEFGRREIEIAEQDMSALISLRKRAQGEKPLAGAKIVGCTHITAQTA 73
Query: 620 VLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWP 679
VLIETL LGA+ RWS+CNIYSTQ+ AAA+A G+ VFA+KGES D+W R +
Sbjct: 74 VLIETLCALGAQCRWSACNIYSTQNEVAAALAEAGVAVFAWKGESEDDFWWCIDRCVNMD 133
Query: 680 GNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKW 739
G QANMILDDGGD T ++ K
Sbjct: 134 G----WQANMILDDGGDLTHWVY-----------------------------------KK 154
Query: 740 YSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG 799
Y + K+I+G+ EE+ TGV+RL ++ K GKL PA+NVNDSVTK KFDNLY CRES++DG
Sbjct: 155 YPNVFKKIRGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDG 214
Query: 800 IKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTM 859
+KR TDVM GK V+ GYG+VGKG A++AL A V+I EIDPICALQA M+GF VV +
Sbjct: 215 LKRTTDVMFGGKQVVVCGYGEVGKGCCAALKALGAIVYITEIDPICALQACMDGFRVVKL 274
Query: 860 EYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK--KYKWENIK 917
+ D+ +TCTGN +V+T +H+ MK+ IVCN+GH + EI+V L+ + WE ++
Sbjct: 275 NEVIRQVDVVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVTSLRTPELTWERVR 334
Query: 918 PQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNN-TSNYPI 976
QVDH+I+PDGK+++LLAEGRL+NL C T P++V+S + Q LA IEL+N Y
Sbjct: 335 SQVDHVIWPDGKRVVLLAEGRLLNLSCST-VPTFVLSITATTQALALIELYNAPEGRYKQ 393
Query: 977 GIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
+Y LPK +DE VA L L + L++L D QAKY+G++KNGP+K + YRY
Sbjct: 394 DVYLLPKKMDEYVASLHLPSFDAHLTELADDQAKYLGLNKNGPFKPNYYRY 444
>pdb|3RV2|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase From
Mycobacterium Marinum
pdb|3RV2|B Chain B, Crystal Structure Of S-Adenosylmethionine Synthetase From
Mycobacterium Marinum
Length = 407
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/392 (51%), Positives = 258/392 (65%), Gaps = 17/392 (4%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDAN---IDY 244
ESV+EGHPDKI D +SD++LD + D ++RVA ETL + + GE+TT A D
Sbjct: 15 ESVTEGHPDKICDAVSDSVLDALLAADPRSRVAVETLVTTGQVHVVGEVTTTAKEAFADI 74
Query: 245 VNIVRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVN-------EGEGLNFD-Q 296
NIVR+ I DIGY++ D G D SC V + QS DIAQGV+ EG D Q
Sbjct: 75 TNIVRERILDIGYDSSDKGFDGASCGVNIGIGAQSPDIAQGVDTAHEARVEGAADPLDAQ 134
Query: 297 GAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDN 356
GAGDQGLMFGYA ++TPELMP I +H + +R +E+RKNG LP+LRPD K+QVT+ Y++
Sbjct: 135 GAGDQGLMFGYAINDTPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIAYED 194
Query: 357 GKPVAIDTIVLSTQHDPEIPYRSXXXXXXXXXXXXXXXXNLLKNT------RYLINPTGR 410
PV +DT+V+STQH +I +L +T R L+NPTG+
Sbjct: 195 RVPVRLDTVVISTQHADDIDLVKTLDPDIREQVLKTVLDDLAHDTLDASAVRVLVNPTGK 254
Query: 411 FVIGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAAN 470
FV+GGP GD GLTGRKIIVDTYGG A HGGGAFSGKDPSK+DRSAAY R++AKN+VAA
Sbjct: 255 FVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAG 314
Query: 471 LAKRCQIQISYAIGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRP 530
LA+R ++Q++YAIG A P + V +FGS + K+ + + FDLRP II+ LNLLRP
Sbjct: 315 LAERVEVQVAYAIGKAAPVGLFVETFGSEAVDPVKIEKAIGEVFDLRPGAIIRDLNLLRP 374
Query: 531 IYKKTSVYGHFGRKEPEFTWELTDKAEVLKNS 562
IY T+ YGHFGR + + WE DK + LK +
Sbjct: 375 IYAPTAAYGHFGRTDVDLPWERLDKVDDLKRA 406
>pdb|3S82|A Chain A, Structure Of A S-Adenosylmethionine Synthetase From
Mycobacterium Avium
pdb|3S82|B Chain B, Structure Of A S-Adenosylmethionine Synthetase From
Mycobacterium Avium
Length = 407
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/392 (50%), Positives = 260/392 (66%), Gaps = 17/392 (4%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDAN---IDY 244
ESV+EGHPDKI D ISD++LD + +D ++RVA ETL + + GE+TT A D
Sbjct: 15 ESVTEGHPDKICDAISDSVLDALLAQDPRSRVAVETLVTTGQVHVVGEVTTTAKEAFADI 74
Query: 245 VNIVRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVN-------EGEGLNFD-Q 296
N VR+ I DIGY++ D G D SC V + QS DIAQGV+ EG D Q
Sbjct: 75 TNTVRERILDIGYDSSDKGFDGASCGVNIGIGAQSPDIAQGVDTAHETRVEGAADPLDAQ 134
Query: 297 GAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDN 356
GAGDQGLMFGYA ++TPE MP I +H + +R +E+RKNG LP+LRPD K+QVT+ +++
Sbjct: 135 GAGDQGLMFGYAINDTPERMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIEFED 194
Query: 357 GKPVAIDTIVLSTQHDPEIPYRSXXXXXXXXXXXXXXXXNLLKNT------RYLINPTGR 410
PV +DT+V+STQH +I + +L +T R L+NPTG+
Sbjct: 195 DVPVRLDTVVISTQHAADIDLENTLTPDIREKVLNTVLNDLAHDTLDTSSTRLLVNPTGK 254
Query: 411 FVIGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAAN 470
FV+GGP GD GLTGRKIIVDTYGG A HGGGAFSGKDPSK+DRSAAY R++AKNIVAA
Sbjct: 255 FVVGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNIVAAG 314
Query: 471 LAKRCQIQISYAIGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRP 530
LA+R ++Q++YAIG A P + + +FG+ + K+ +V + FDLRP II+ L+LLRP
Sbjct: 315 LAERVEVQVAYAIGKAAPVGLFIETFGTATVDPVKIEKIVPEVFDLRPGAIIRDLDLLRP 374
Query: 531 IYKKTSVYGHFGRKEPEFTWELTDKAEVLKNS 562
IY +T+ YGHFGR + E WE +K + LK +
Sbjct: 375 IYAQTAAYGHFGRTDVELPWEQLNKVDDLKRA 406
>pdb|3TDE|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase
Rv1392 From Mycobacterium Tuberculosis
pdb|3TDE|B Chain B, Crystal Structure Of S-Adenosylmethionine Synthetase
Rv1392 From Mycobacterium Tuberculosis
pdb|3TDE|C Chain C, Crystal Structure Of S-Adenosylmethionine Synthetase
Rv1392 From Mycobacterium Tuberculosis
pdb|3TDE|D Chain D, Crystal Structure Of S-Adenosylmethionine Synthetase
Rv1392 From Mycobacterium Tuberculosis
Length = 408
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/392 (50%), Positives = 253/392 (64%), Gaps = 17/392 (4%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDAN---IDY 244
ESV+EGHPDKI D ISD++LD + D ++RVA ETL + + GE+TT A D
Sbjct: 16 ESVTEGHPDKICDAISDSVLDALLAADPRSRVAVETLVTTGQVHVVGEVTTSAKEAFADI 75
Query: 245 VNIVRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVN-------EGEGLNFD-Q 296
N VR I +IGY++ D G D +C V + QS DIAQGV+ EG D Q
Sbjct: 76 TNTVRARILEIGYDSSDKGFDGATCGVNIGIGAQSPDIAQGVDTAHEARVEGAADPLDSQ 135
Query: 297 GAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDN 356
GAGDQGLMFGYA + TPELMP I +H + +R +E+RKNG LP+LRPD K+QVT+ Y++
Sbjct: 136 GAGDQGLMFGYAINATPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIAYED 195
Query: 357 GKPVAIDTIVLSTQHDPEIPYRSXXXXXXXXXXXXXXXXNLLKNT------RYLINPTGR 410
PV +DT+V+STQH +I +L T R L+NPTG+
Sbjct: 196 NVPVRLDTVVISTQHAADIDLEKTLDPDIREKVLNTVLDDLAHETLDASTVRVLVNPTGK 255
Query: 411 FVIGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAAN 470
FV+GGP GD GLTGRKIIVDTYGG A HGGGAFSGKDPSK+DRSAAY R++AKN+VAA
Sbjct: 256 FVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAG 315
Query: 471 LAKRCQIQISYAIGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRP 530
LA+R ++Q++YAIG A P + V +FG+ K+ + + FDLRP II+ LNLLRP
Sbjct: 316 LAERVEVQVAYAIGKAAPVGLFVETFGTETEDPVKIEKAIGEVFDLRPGAIIRDLNLLRP 375
Query: 531 IYKKTSVYGHFGRKEPEFTWELTDKAEVLKNS 562
IY T+ YGHFGR + E WE DK + LK +
Sbjct: 376 IYAPTAAYGHFGRTDVELPWEQLDKVDDLKRA 407
>pdb|1QM4|A Chain A, Methionine Adenosyltransferase Complexed With A
L-Methionine Analogous
pdb|1QM4|B Chain B, Methionine Adenosyltransferase Complexed With A
L-Methionine Analogous
pdb|1O90|A Chain A, Methionine Adenosyltransferase Complexed With A
L-Methionine Analogous
pdb|1O90|B Chain B, Methionine Adenosyltransferase Complexed With A
L-Methionine Analogous
pdb|1O92|A Chain A, Methionine Adenosyltransferase Complexed With Adp And A
L-Methionine Analogous
pdb|1O92|B Chain B, Methionine Adenosyltransferase Complexed With Adp And A
L-Methionine Analogous
pdb|1O93|A Chain A, Methionine Adenosyltransferase Complexed With Atp And A
L-Methionine Analogous
pdb|1O93|B Chain B, Methionine Adenosyltransferase Complexed With Atp And A
L-Methionine Analogous
pdb|1O9T|B Chain B, Methionine Adenosyltransferase Complexed With Both
Substrates Atp And Methionine
pdb|1O9T|A Chain A, Methionine Adenosyltransferase Complexed With Both
Substrates Atp And Methionine
Length = 396
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/373 (52%), Positives = 258/373 (69%), Gaps = 8/373 (2%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESV EGHPDKI DQISDA+LD +D A+VA ET+C +++L GEIT+ A IDY +
Sbjct: 24 ESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMIDYQRV 83
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
VR TIK IGY++ G D+K+C VL+ +QS DIAQ V+ D GAGDQGLMFGY
Sbjct: 84 VRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEE-DVGAGDQGLMFGY 142
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRY--DNGK--PVAID 363
A DET E MP I +H + R ++LR++G LPWLRPD+K+QVT++Y DNG PV +
Sbjct: 143 ATDETEECMPLTIVLAHKLNTRMADLRRSGVLPWLRPDSKTQVTVQYVQDNGAVIPVRVH 202
Query: 364 TIVLSTQHDPEIPYRSXXXXXXXXXXXXXXXXNLL-KNTRYLINPTGRFVIGGPKGDCGL 422
TIV+S QH+ +I + L ++T Y + P+GRFVIGGP+GD G+
Sbjct: 203 TIVISVQHNEDITLEAMREALKEQVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGV 262
Query: 423 TGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYA 482
TGRKIIVDTYGG HGGGAFSGKD +K+DRSAAY R++AK++V A L +R +Q+SYA
Sbjct: 263 TGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYA 322
Query: 483 IGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFG 542
IGVA+P SI + ++G+ K ++ +L +V K+FDLRP I++ L+L +PIY+KT+ YGHFG
Sbjct: 323 IGVAEPLSISIFTYGTSKKTERELLEVVNKNFDLRPGVIVRDLDLKKPIYQKTACYGHFG 382
Query: 543 RKEPEFTWELTDK 555
R EF WE+ K
Sbjct: 383 RS--EFPWEVPKK 393
>pdb|2OBV|A Chain A, Crystal Structure Of The Human S-adenosylmethionine
Synthetase 1 In Complex With The Product
Length = 384
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/373 (52%), Positives = 257/373 (68%), Gaps = 8/373 (2%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESV EGHPDKI DQISDA+LD +D A+VA ET+C +++L GEIT+ A +DY +
Sbjct: 12 ESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRV 71
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
VR TIK IGY++ G D+K+C VL+ +QS DIAQ V+ D GAGDQGLMFGY
Sbjct: 72 VRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEE-DVGAGDQGLMFGY 130
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRY--DNGK--PVAID 363
A DET E MP I +H + R ++LR++G LPWLRPD+K+QVT++Y DNG PV I
Sbjct: 131 ATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGAVIPVRIH 190
Query: 364 TIVLSTQHDPEIPYRSXXXXXXXXXXXXXXXXNLL-KNTRYLINPTGRFVIGGPKGDCGL 422
TIV+S QH+ +I L ++T Y + P+GRFVIGGP+GD G+
Sbjct: 191 TIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGV 250
Query: 423 TGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYA 482
TGRKIIVDTYGG HGGGAFSGKD +K+DRSAAY R++AK++V A L +R +Q+SYA
Sbjct: 251 TGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYA 310
Query: 483 IGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFG 542
IGVA+P SI + ++G+ + ++ +L +V K+FDLRP I++ L+L +PIY+KT+ YGHFG
Sbjct: 311 IGVAEPLSISIFTYGTSQKTERELLDVVHKNFDLRPGVIVRDLDLKKPIYQKTACYGHFG 370
Query: 543 RKEPEFTWELTDK 555
R EF WE+ K
Sbjct: 371 RS--EFPWEVPRK 381
>pdb|2P02|A Chain A, Crystal Structure Of The Alpha Subunit Of Human S-
Adenosylmethionine Synthetase 2
Length = 396
Score = 361 bits (927), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/373 (51%), Positives = 254/373 (68%), Gaps = 8/373 (2%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESV EGHPDKI DQISDA+LD +D A+VA ET+ +I+L+GEIT+ A +DY +
Sbjct: 24 ESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKV 83
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
VR+ +K IGY++ G DYK+C VL+ +QS DIAQGV+ D GAGDQGLMFGY
Sbjct: 84 VREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEE-DIGAGDQGLMFGY 142
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRY--DNGK--PVAID 363
A DET E MP I +H + + +ELR+NG LPWLRPD+K+QVT++Y D G P+ +
Sbjct: 143 ATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVH 202
Query: 364 TIVLSTQHDPEIPYRSXXXXXXXXXXXXXXXXNLL-KNTRYLINPTGRFVIGGPKGDCGL 422
TIV+S QHD E+ L ++T Y + P+GRFVIGGP+GD GL
Sbjct: 203 TIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGL 262
Query: 423 TGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYA 482
TGRKIIVDTYGG HGGGAFSGKD +K+DRSAAY R++AK++V L +R +Q+SYA
Sbjct: 263 TGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYA 322
Query: 483 IGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFG 542
IGV+ P SI + +G+ + S+ +L +VKK+FDLRP I++ L+L +PIY++T+ YGHFG
Sbjct: 323 IGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFG 382
Query: 543 RKEPEFTWELTDK 555
R F WE+ K
Sbjct: 383 RD--SFPWEVPKK 393
>pdb|3SO4|A Chain A, Methionine-Adenosyltransferase From Entamoeba Histolytica
pdb|3SO4|B Chain B, Methionine-Adenosyltransferase From Entamoeba Histolytica
pdb|3SO4|C Chain C, Methionine-Adenosyltransferase From Entamoeba Histolytica
pdb|3SO4|D Chain D, Methionine-Adenosyltransferase From Entamoeba Histolytica
Length = 415
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 196/377 (51%), Positives = 248/377 (65%), Gaps = 8/377 (2%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVS GHPDK+ DQISDAILD +D K+ VA ET LI++ GEITT+A ID I
Sbjct: 28 ESVSGGHPDKMCDQISDAILDACLAQDPKSHVACETATKTGLILVLGEITTNAVIDIPKI 87
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
VR +K IGY++ + G DY++C+VL +QS DIA+GV+ E D GAGDQG+MFGY
Sbjct: 88 VRGVVKSIGYDDTNKGFDYQTCSVLSCVEQQSQDIAKGVHV-EKKEEDIGAGDQGIMFGY 146
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYD----NGKPVAID 363
A DE+ E+MP S ++ R E R+ G LPWLRPD+KSQVTL Y+ + KP+ +
Sbjct: 147 ATDESKEMMPLTHVLSTKLILRLQECREKGILPWLRPDSKSQVTLEYEEVEGHLKPIRVH 206
Query: 364 TIVLSTQHDPEIPYRSXXXXXXXXXXXXXXXXNLL--KNTRYLINPTGRFVIGGPKGDCG 421
TIV+STQH + L+ K RY NP+GRFVIGGP GD G
Sbjct: 207 TIVISTQHADNVSNEEIAKGLEEEVTQKVIPKELMDDKMLRYY-NPSGRFVIGGPMGDAG 265
Query: 422 LTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISY 481
LTGRKIIVDTYGG HGGGAFSGKD SK+DRS AY R+IAK++V A L R +Q+SY
Sbjct: 266 LTGRKIIVDTYGGWGAHGGGAFSGKDSSKVDRSGAYCARWIAKSLVHAGLCHRVLVQLSY 325
Query: 482 AIGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHF 541
AIGV+ P SI V ++G+G + L +V K+FD+RP IIK L L RPI++KT+V GHF
Sbjct: 326 AIGVSHPLSINVNTYGTGICDESILVDIVNKNFDMRPGMIIKELGLTRPIFQKTAVGGHF 385
Query: 542 GRKEPEFTWELTDKAEV 558
GR +P+F WE + E+
Sbjct: 386 GRNDPDFKWEFPKELEI 402
>pdb|3TRD|A Chain A, Structure Of An Alpha-Beta Serine Hydrolase Homologue From
Coxiella Burnetii
Length = 208
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 96/177 (54%), Gaps = 6/177 (3%)
Query: 8 FNINGSVGILHCAINFPSSIXXXXXXGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYI 67
F I G VG L I P I +I HPHPL GGTM+NKVV TL + + LG
Sbjct: 9 FLIQGPVGQLEVMITRPKGIEKSVTG---IICHPHPLHGGTMNNKVVTTLAKALDELGLK 65
Query: 68 SIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKR 127
++R NFRGVG S G YD+G GE +D++ +LR+++ + I LAGFSFG ++ AK+
Sbjct: 66 TVRFNFRGVGKSQGRYDNGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-- 123
Query: 128 LDKEXXXXXXXXXXXXXXKWL-IPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPV 183
D++ + + ++ +I+ G+ DE++P + V + N + PV
Sbjct: 124 YDQKVAQLISVAPPVFYEGFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPV 180
>pdb|2FUK|A Chain A, Crystal Structure Of Xc6422 From Xanthomonas Campestris: A
Member Of AB SERINE HYDROLASE WITHOUT LID AT 1.6
Resolution
Length = 220
Score = 96.3 bits (238), Expect = 8e-20, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 8 FNINGSVGILHCAINFPSSIXXXXXXGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYI 67
++G VG L A++ P ++ HP GG+M NKVV R + LG
Sbjct: 13 LTLDGPVGPLDVAVDLPEPDVAVQPV-TAIVCHPLSTEGGSMHNKVVTMAARALRELGIT 71
Query: 68 SIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKR 127
+R NFR VG S+G++D G+GE DD+ + +++ + P + LAGFSFG +V +
Sbjct: 72 VVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAA 131
Query: 128 LDKEXXXXXXXXXXXXXXKWLIPEV--PKNTIIIHGELDEIIPLKDVFLWANPLD 180
L+ + +W +V P ++I G+ DEI+ + V+ W L+
Sbjct: 132 LEPQ----VLISIAPPAGRWDFSDVQPPAQWLVIQGDADEIVDPQAVYDWLETLE 182
>pdb|2I3D|A Chain A, Crystal Structure Of Protein Of Unknown Function Atu1826,
A Putative AlphaBETA HYDROLASE FROM AGROBACTERIUM
TUMEFACIENS
pdb|2I3D|B Chain B, Crystal Structure Of Protein Of Unknown Function Atu1826,
A Putative AlphaBETA HYDROLASE FROM AGROBACTERIUM
TUMEFACIENS
Length = 249
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDME 94
+ +I HPHP FGGT +N++V L + G+ ++R NFR +G S G +D G GE D
Sbjct: 49 IAIILHPHPQFGGTXNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGELSDAA 108
Query: 95 ILLRYIQKKYP-YLPIILAGFSFGTFVQAK-LQKRLDKEXXXXXXXXXXXXXXKWLIPEV 152
L ++Q +P +AG+SFG ++ + L +R + E +L P
Sbjct: 109 SALDWVQSLHPDSKSCWVAGYSFGAWIGXQLLXRRPEIEGFXSIAPQPNTYDFSFLAP-C 167
Query: 153 PKNTIIIHGELDEIIPLKDV 172
P + +II+G+ D++ P KDV
Sbjct: 168 PSSGLIINGDADKVAPEKDV 187
>pdb|1HKH|A Chain A, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HKH|B Chain B, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HL7|A Chain A, Gamma Lactamase From An Aureobacterium Species In Complex
With 3a,4,7,7a-Tetrahydro-Benzo [1,3] Dioxol-2-One
pdb|1HL7|B Chain B, Gamma Lactamase From An Aureobacterium Species In Complex
With 3a,4,7,7a-Tetrahydro-Benzo [1,3] Dioxol-2-One
Length = 279
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET--DDM 93
V++ H +PL G + + + R +L+ GY I + RG G SS + +T D+
Sbjct: 26 VVLIHGYPLDGHSWERQT-----RELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADL 80
Query: 94 EILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE 131
+L + + ++L GFS GT A+ R E
Sbjct: 81 HTVLETLDLR----DVVLVGFSMGTGELARYVARYGHE 114
>pdb|2QJW|A Chain A, Crystal Structure Of A Putative Hydrolase Of The AlphaBETA
Superfamily (Xcc1541) From Xanthomonas Campestris Pv.
Campestris At 1.35 A Resolution
pdb|2QJW|B Chain B, Crystal Structure Of A Putative Hydrolase Of The AlphaBETA
Superfamily (Xcc1541) From Xanthomonas Campestris Pv.
Campestris At 1.35 A Resolution
pdb|2QJW|C Chain C, Crystal Structure Of A Putative Hydrolase Of The AlphaBETA
Superfamily (Xcc1541) From Xanthomonas Campestris Pv.
Campestris At 1.35 A Resolution
pdb|2QJW|D Chain D, Crystal Structure Of A Putative Hydrolase Of The AlphaBETA
Superfamily (Xcc1541) From Xanthomonas Campestris Pv.
Campestris At 1.35 A Resolution
Length = 176
Score = 31.2 bits (69), Expect = 3.0, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 11/162 (6%)
Query: 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDM 93
G ++AH F D V L V LG+ R +F + A G+ +
Sbjct: 5 GHCILAHG---FESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVR-GRL 60
Query: 94 EILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEXXXXXXXXXXXXXXKWL-IPEV 152
+ LL + P++LAG S G+++ A++ ++ L V
Sbjct: 61 QRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVPTRALFLXVPPTKXGPLPALDAAAV 120
Query: 153 PKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIPESVSEGH 194
P + I+H DE+IP DV WA +++ V +GH
Sbjct: 121 PIS--IVHAWHDELIPAADVIAWAQARSARLLL----VDDGH 156
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,373,292
Number of Sequences: 62578
Number of extensions: 1292186
Number of successful extensions: 3891
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3772
Number of HSP's gapped (non-prelim): 52
length of query: 1027
length of database: 14,973,337
effective HSP length: 109
effective length of query: 918
effective length of database: 8,152,335
effective search space: 7483843530
effective search space used: 7483843530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)