Query psy15208
Match_columns 1027
No_of_seqs 697 out of 5167
Neff 6.4
Searched_HMMs 46136
Date Fri Aug 16 23:27:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15208.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15208hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0192 MetK S-adenosylmethion 100.0 2E-158 5E-163 1266.4 36.7 382 182-564 4-387 (388)
2 TIGR01034 metK S-adenosylmethi 100.0 1E-152 3E-157 1244.8 37.3 376 184-563 1-377 (377)
3 PRK05250 S-adenosylmethionine 100.0 2E-152 4E-157 1248.9 38.0 379 183-563 3-382 (384)
4 PRK12459 S-adenosylmethionine 100.0 1E-151 3E-156 1243.3 37.8 377 183-563 4-384 (386)
5 PLN02243 S-adenosylmethionine 100.0 1E-150 2E-155 1232.9 37.9 374 183-556 4-386 (386)
6 PTZ00104 S-adenosylmethionine 100.0 1E-150 2E-155 1237.2 37.4 376 182-558 10-393 (398)
7 KOG1506|consensus 100.0 1E-142 3E-147 1104.6 30.2 374 181-557 4-382 (383)
8 COG0499 SAM1 S-adenosylhomocys 100.0 2E-136 5E-141 1105.7 37.4 416 562-1019 2-420 (420)
9 KOG1370|consensus 100.0 4E-134 9E-139 1060.6 35.6 427 562-1027 5-434 (434)
10 PLN02494 adenosylhomocysteinas 100.0 4E-129 8E-134 1112.2 48.2 462 563-1027 4-477 (477)
11 PTZ00075 Adenosylhomocysteinas 100.0 3E-126 6E-131 1092.0 46.8 462 563-1027 3-476 (476)
12 PRK05476 S-adenosyl-L-homocyst 100.0 1E-112 2E-117 978.4 43.7 418 562-1021 5-425 (425)
13 TIGR00936 ahcY adenosylhomocys 100.0 4E-111 9E-116 960.3 42.4 404 574-1019 1-406 (406)
14 cd00401 AdoHcyase S-adenosyl-L 100.0 3E-106 7E-111 923.2 42.0 411 570-1019 1-413 (413)
15 PF05221 AdoHcyase: S-adenosyl 100.0 1.6E-94 3.4E-99 766.7 20.4 265 564-1026 2-268 (268)
16 PF02773 S-AdoMet_synt_C: S-ad 100.0 2.1E-77 4.6E-82 570.0 10.3 138 413-552 1-138 (138)
17 PF02772 S-AdoMet_synt_M: S-ad 100.0 1.6E-50 3.4E-55 384.9 11.5 117 295-411 2-120 (120)
18 PF00670 AdoHcyase_NAD: S-aden 100.0 5.7E-40 1.2E-44 329.3 15.2 160 788-947 1-162 (162)
19 PF00438 S-AdoMet_synt_N: S-ad 99.9 1.4E-25 3.1E-30 207.3 5.5 99 182-280 2-100 (100)
20 COG2945 Predicted hydrolase of 99.8 1.5E-19 3.1E-24 183.9 16.2 196 5-207 4-205 (210)
21 PHA02857 monoglyceride lipase; 99.8 7.6E-18 1.7E-22 184.9 21.3 157 12-179 7-235 (276)
22 PLN02298 hydrolase, alpha/beta 99.8 6.9E-18 1.5E-22 190.9 21.4 200 4-211 31-315 (330)
23 PLN02385 hydrolase; alpha/beta 99.8 1.8E-17 3.8E-22 189.4 22.0 191 9-208 65-340 (349)
24 KOG1455|consensus 99.8 1.4E-17 3E-22 180.6 18.6 195 8-210 30-309 (313)
25 PRK13604 luxD acyl transferase 99.7 7E-17 1.5E-21 179.3 20.2 164 6-180 10-229 (307)
26 PRK05077 frsA fermentation/res 99.7 4.7E-16 1E-20 181.8 23.4 196 3-208 166-411 (414)
27 PRK10749 lysophospholipase L2; 99.7 2.1E-16 4.6E-21 179.4 19.2 124 8-143 33-165 (330)
28 COG2267 PldB Lysophospholipase 99.7 8.5E-16 1.9E-20 172.1 19.9 194 8-212 12-293 (298)
29 PLN02652 hydrolase; alpha/beta 99.7 2.8E-15 6.1E-20 174.2 23.1 164 7-179 112-350 (395)
30 TIGR02240 PHA_depoly_arom poly 99.7 2.4E-15 5.1E-20 165.7 18.4 180 11-208 8-261 (276)
31 PRK00870 haloalkane dehalogena 99.6 1.2E-14 2.6E-19 162.4 22.0 99 33-142 46-148 (302)
32 TIGR03343 biphenyl_bphD 2-hydr 99.6 9.9E-15 2.1E-19 160.1 19.6 142 33-182 30-252 (282)
33 PRK10673 acyl-CoA esterase; Pr 99.6 8E-15 1.7E-19 158.2 18.2 140 31-182 14-224 (255)
34 TIGR03611 RutD pyrimidine util 99.6 1.1E-14 2.4E-19 155.2 18.9 139 32-182 12-227 (257)
35 PLN02824 hydrolase, alpha/beta 99.6 1E-14 2.2E-19 162.1 19.0 98 33-142 29-135 (294)
36 TIGR01607 PST-A Plasmodium sub 99.6 5.5E-15 1.2E-19 168.2 16.8 128 10-142 2-183 (332)
37 TIGR03056 bchO_mg_che_rel puta 99.6 2.8E-14 6.1E-19 155.1 18.9 98 33-142 28-128 (278)
38 PLN02965 Probable pheophorbida 99.6 3.8E-14 8.2E-19 154.5 19.3 140 35-184 5-224 (255)
39 TIGR03101 hydr2_PEP hydrolase, 99.6 1.6E-14 3.5E-19 159.0 16.1 132 7-145 2-135 (266)
40 PLN02511 hydrolase 99.6 1E-13 2.2E-18 161.2 23.5 134 6-142 72-208 (388)
41 PLN03087 BODYGUARD 1 domain co 99.6 9.4E-14 2E-18 164.3 22.3 120 10-142 181-307 (481)
42 KOG1552|consensus 99.6 5.6E-14 1.2E-18 150.2 16.8 161 7-181 37-220 (258)
43 PRK10985 putative hydrolase; P 99.6 1.4E-13 3.1E-18 155.9 21.2 134 6-143 32-167 (324)
44 TIGR02427 protocat_pcaD 3-oxoa 99.6 4.5E-14 9.7E-19 148.9 15.2 138 32-181 12-221 (251)
45 PRK03592 haloalkane dehalogena 99.5 1.3E-13 2.8E-18 153.2 18.9 98 33-142 27-126 (295)
46 PF02826 2-Hacid_dh_C: D-isome 99.5 2.2E-14 4.8E-19 149.1 11.7 127 782-909 8-138 (178)
47 PRK10566 esterase; Provisional 99.5 1.3E-13 2.7E-18 149.2 16.7 154 17-179 12-212 (249)
48 PLN02211 methyl indole-3-aceta 99.5 3.1E-13 6.8E-18 149.6 20.2 104 32-142 17-120 (273)
49 TIGR03100 hydr1_PEP hydrolase, 99.5 2.9E-13 6.3E-18 149.9 19.8 130 5-143 2-133 (274)
50 TIGR03695 menH_SHCHC 2-succiny 99.5 2.7E-13 6E-18 142.3 18.3 102 34-143 2-104 (251)
51 PLN02679 hydrolase, alpha/beta 99.5 3.3E-13 7.1E-18 155.2 19.7 98 33-142 88-189 (360)
52 PRK10349 carboxylesterase BioH 99.5 2.8E-13 6.1E-18 147.1 17.8 134 34-182 14-225 (256)
53 TIGR01250 pro_imino_pep_2 prol 99.5 9E-13 1.9E-17 142.5 21.4 100 33-142 25-129 (288)
54 PF12697 Abhydrolase_6: Alpha/ 99.5 1.1E-13 2.3E-18 143.3 12.9 135 36-182 1-205 (228)
55 TIGR01738 bioH putative pimelo 99.5 2E-13 4.4E-18 143.6 15.3 135 33-182 4-217 (245)
56 PF12695 Abhydrolase_5: Alpha/ 99.5 2.8E-13 6.1E-18 133.4 14.5 130 35-180 1-131 (145)
57 PLN02578 hydrolase 99.5 3.8E-13 8.3E-18 154.3 17.2 98 33-142 86-185 (354)
58 KOG4391|consensus 99.5 2.3E-13 5.1E-18 140.4 13.5 200 2-213 51-282 (300)
59 COG1647 Esterase/lipase [Gener 99.5 2.1E-13 4.6E-18 142.0 13.2 166 33-208 15-239 (243)
60 PRK03204 haloalkane dehalogena 99.5 1.2E-12 2.6E-17 145.7 19.8 117 9-142 18-134 (286)
61 COG0111 SerA Phosphoglycerate 99.5 8.7E-14 1.9E-18 157.0 9.6 126 782-909 115-244 (324)
62 PRK14875 acetoin dehydrogenase 99.5 4.2E-13 9.1E-18 153.4 15.4 99 33-143 131-231 (371)
63 PRK11126 2-succinyl-6-hydroxy- 99.5 3.6E-13 7.7E-18 144.4 13.3 99 33-143 2-101 (242)
64 TIGR01249 pro_imino_pep_1 prol 99.4 2.4E-12 5.1E-17 144.6 18.4 120 9-142 8-128 (306)
65 PRK06489 hypothetical protein; 99.4 2.8E-12 6E-17 147.5 19.4 103 33-142 69-187 (360)
66 PLN03084 alpha/beta hydrolase 99.4 1.9E-12 4E-17 150.0 17.7 99 33-143 127-231 (383)
67 TIGR01840 esterase_phb esteras 99.4 1.1E-12 2.4E-17 139.7 14.5 153 20-178 2-193 (212)
68 PRK07581 hypothetical protein; 99.4 2E-12 4.3E-17 147.1 17.1 103 32-141 40-156 (339)
69 COG1506 DAP2 Dipeptidyl aminop 99.4 3E-12 6.6E-17 157.2 17.7 171 4-180 364-578 (620)
70 KOG1454|consensus 99.4 7.5E-12 1.6E-16 142.1 19.2 104 32-142 57-164 (326)
71 PRK11071 esterase YqiA; Provis 99.4 4.7E-12 1E-16 133.1 15.6 126 34-180 2-163 (190)
72 KOG4178|consensus 99.4 8.1E-12 1.8E-16 138.1 17.8 100 32-142 43-146 (322)
73 KOG4667|consensus 99.4 6.1E-12 1.3E-16 130.2 15.4 172 5-189 10-235 (269)
74 PRK08775 homoserine O-acetyltr 99.4 2.5E-12 5.5E-17 146.8 13.8 84 53-142 84-171 (343)
75 PLN02894 hydrolase, alpha/beta 99.4 3.3E-11 7.1E-16 140.9 22.6 102 32-142 104-209 (402)
76 TIGR01392 homoserO_Ac_trn homo 99.4 2E-12 4.4E-17 148.0 12.2 119 16-143 17-161 (351)
77 PRK05855 short chain dehydroge 99.4 2.3E-11 4.9E-16 147.4 21.3 106 7-127 5-114 (582)
78 COG1052 LdhA Lactate dehydroge 99.4 1.6E-12 3.4E-17 146.8 9.9 104 804-909 140-247 (324)
79 TIGR01836 PHA_synth_III_C poly 99.4 8.9E-12 1.9E-16 142.7 16.1 123 16-143 47-170 (350)
80 PF06500 DUF1100: Alpha/beta h 99.3 1.8E-11 3.9E-16 140.3 15.8 166 3-178 163-377 (411)
81 PRK15409 bifunctional glyoxyla 99.3 3.2E-12 6.9E-17 144.8 9.5 111 805-917 140-256 (323)
82 PRK08410 2-hydroxyacid dehydro 99.3 4.7E-12 1E-16 142.9 10.9 99 806-909 141-243 (311)
83 COG0429 Predicted hydrolase of 99.3 5.9E-11 1.3E-15 131.1 18.2 128 7-142 51-183 (345)
84 PRK00175 metX homoserine O-ace 99.3 1.5E-11 3.2E-16 142.7 13.5 119 16-143 34-181 (379)
85 PRK06487 glycerate dehydrogena 99.3 7.1E-12 1.5E-16 141.8 8.7 106 806-918 144-254 (317)
86 PLN02928 oxidoreductase family 99.2 1.6E-11 3.4E-16 140.6 9.6 104 805-909 154-273 (347)
87 PRK11460 putative hydrolase; P 99.2 1.6E-10 3.5E-15 125.2 16.9 141 31-178 14-173 (232)
88 PLN02872 triacylglycerol lipas 99.2 7.2E-11 1.6E-15 137.3 14.2 125 4-130 43-182 (395)
89 PRK06932 glycerate dehydrogena 99.2 2.7E-11 5.8E-16 136.9 10.4 98 806-909 143-244 (314)
90 PLN00021 chlorophyllase 99.2 5.3E-10 1.2E-14 126.3 19.3 136 16-164 38-200 (313)
91 PLN03139 formate dehydrogenase 99.2 2.6E-11 5.7E-16 139.7 8.9 114 805-919 194-313 (386)
92 PLN02306 hydroxypyruvate reduc 99.2 2.7E-11 5.9E-16 140.0 9.0 104 805-909 160-283 (386)
93 PRK07574 formate dehydrogenase 99.2 2.7E-11 5.8E-16 139.8 8.9 112 805-917 187-304 (385)
94 KOG1838|consensus 99.2 5.7E-10 1.2E-14 127.3 19.4 133 6-141 94-232 (409)
95 KOG0068|consensus 99.2 3E-11 6.4E-16 132.3 8.1 114 793-909 130-247 (406)
96 COG0412 Dienelactone hydrolase 99.2 5.2E-10 1.1E-14 121.6 17.7 161 6-177 3-182 (236)
97 PLN02980 2-oxoglutarate decarb 99.2 5.5E-10 1.2E-14 150.0 21.4 99 32-142 1370-1478(1655)
98 PRK15438 erythronate-4-phospha 99.2 6.7E-11 1.4E-15 136.0 11.0 103 802-909 108-218 (378)
99 PLN02442 S-formylglutathione h 99.2 9.8E-10 2.1E-14 122.6 19.8 149 15-169 30-233 (283)
100 PRK11790 D-3-phosphoglycerate 99.2 4.8E-11 1E-15 139.4 9.6 100 805-909 146-250 (409)
101 TIGR01838 PHA_synth_I poly(R)- 99.2 7.1E-10 1.5E-14 132.8 18.9 123 16-143 173-301 (532)
102 PF01738 DLH: Dienelactone hyd 99.2 2E-10 4.3E-15 122.6 12.5 149 17-176 1-168 (218)
103 PRK13243 glyoxylate reductase; 99.2 1.2E-10 2.6E-15 132.7 11.3 103 805-909 145-251 (333)
104 PRK06436 glycerate dehydrogena 99.1 1E-10 2.2E-15 131.4 9.4 98 805-909 117-220 (303)
105 PF00326 Peptidase_S9: Prolyl 99.1 3.5E-10 7.7E-15 120.0 13.0 123 54-178 3-169 (213)
106 PF05448 AXE1: Acetyl xylan es 99.1 2.4E-09 5.1E-14 121.4 19.6 166 6-182 57-291 (320)
107 TIGR00976 /NonD putative hydro 99.1 2.7E-10 5.8E-15 138.5 12.6 129 11-145 2-133 (550)
108 TIGR02853 spore_dpaA dipicolin 99.1 5.9E-10 1.3E-14 124.5 13.3 149 757-909 101-252 (287)
109 TIGR02821 fghA_ester_D S-formy 99.1 2.5E-09 5.4E-14 118.7 18.2 158 6-169 14-227 (275)
110 PRK15469 ghrA bifunctional gly 99.1 1.1E-10 2.5E-15 131.6 7.5 112 805-918 131-247 (312)
111 PRK00257 erythronate-4-phospha 99.1 3.5E-10 7.5E-15 130.5 11.5 101 804-909 110-218 (381)
112 TIGR01327 PGDH D-3-phosphoglyc 99.1 2.5E-10 5.4E-15 137.6 10.5 112 805-918 133-250 (525)
113 PRK13581 D-3-phosphoglycerate 99.1 2.5E-10 5.3E-15 137.6 10.2 113 805-919 135-252 (526)
114 PRK10162 acetyl esterase; Prov 99.1 8.2E-09 1.8E-13 117.1 20.5 128 5-143 57-194 (318)
115 KOG4409|consensus 99.1 1.2E-09 2.6E-14 121.4 12.8 116 16-144 77-195 (365)
116 KOG2564|consensus 99.0 1E-09 2.2E-14 117.9 11.4 125 6-141 51-179 (343)
117 PRK10115 protease 2; Provision 99.0 4.3E-09 9.3E-14 130.7 18.3 170 4-179 415-632 (686)
118 PF00561 Abhydrolase_1: alpha/ 99.0 7.9E-10 1.7E-14 116.2 9.8 122 66-189 1-211 (230)
119 COG3458 Acetyl esterase (deace 99.0 3.7E-09 8.1E-14 113.4 14.0 191 5-206 56-314 (321)
120 KOG2382|consensus 99.0 6.9E-09 1.5E-13 115.1 15.7 105 31-142 50-157 (315)
121 COG3571 Predicted hydrolase of 99.0 1.9E-08 4.1E-13 100.2 16.9 158 21-187 6-176 (213)
122 KOG0069|consensus 99.0 1.1E-09 2.4E-14 122.8 8.9 96 805-900 157-256 (336)
123 PF02230 Abhydrolase_2: Phosph 99.0 1.4E-08 3E-13 108.6 16.8 140 31-177 12-179 (216)
124 PRK12480 D-lactate dehydrogena 98.9 1.5E-09 3.2E-14 123.6 8.8 100 805-909 141-245 (330)
125 PRK08306 dipicolinate synthase 98.9 7.3E-09 1.6E-13 116.3 13.3 117 788-905 130-249 (296)
126 KOG0024|consensus 98.9 2E-09 4.4E-14 118.3 8.0 161 797-968 159-337 (354)
127 PF12146 Hydrolase_4: Putative 98.9 2.5E-09 5.4E-14 96.6 7.3 73 16-97 3-78 (79)
128 PRK13403 ketol-acid reductoiso 98.9 4E-09 8.6E-14 117.7 10.1 94 807-900 13-109 (335)
129 PF10503 Esterase_phd: Esteras 98.9 1.4E-08 3.1E-13 108.9 13.7 155 18-177 2-193 (220)
130 TIGR03230 lipo_lipase lipoprot 98.9 1.6E-08 3.5E-13 118.3 14.3 112 32-147 40-157 (442)
131 PF02129 Peptidase_S15: X-Pro 98.9 2.2E-08 4.8E-13 110.9 14.5 122 14-143 1-135 (272)
132 PRK07868 acyl-CoA synthetase; 98.9 4.5E-08 9.7E-13 127.0 19.1 123 15-141 47-174 (994)
133 cd00707 Pancreat_lipase_like P 98.9 1.1E-08 2.4E-13 113.8 11.3 109 32-147 35-150 (275)
134 PRK08605 D-lactate dehydrogena 98.9 5.1E-09 1.1E-13 119.5 8.9 101 805-909 141-247 (332)
135 COG1063 Tdh Threonine dehydrog 98.8 1.3E-08 2.8E-13 117.1 8.8 150 808-968 167-335 (350)
136 KOG2984|consensus 98.8 1.6E-08 3.4E-13 104.2 7.6 167 34-208 43-271 (277)
137 PF06821 Ser_hydrolase: Serine 98.7 2.9E-08 6.2E-13 102.8 8.1 133 36-189 1-150 (171)
138 PRK09424 pntA NAD(P) transhydr 98.7 4.7E-08 1E-12 116.5 10.2 92 808-899 163-287 (509)
139 PF06342 DUF1057: Alpha/beta h 98.7 1.1E-06 2.4E-11 95.9 19.5 137 31-179 33-238 (297)
140 PF12740 Chlorophyllase2: Chlo 98.7 3.5E-07 7.5E-12 99.9 14.7 132 20-164 7-165 (259)
141 PF02273 Acyl_transf_2: Acyl t 98.7 1.1E-06 2.4E-11 93.6 17.8 163 6-179 3-221 (294)
142 COG0400 Predicted esterase [Ge 98.6 2.4E-07 5.2E-12 98.6 13.0 137 31-178 16-171 (207)
143 TIGR01839 PHA_synth_II poly(R) 98.6 5.9E-07 1.3E-11 107.3 17.5 116 16-142 200-326 (560)
144 TIGR03502 lipase_Pla1_cef extr 98.6 9E-08 1.9E-12 118.4 10.6 92 32-128 448-576 (792)
145 PRK06765 homoserine O-acetyltr 98.6 7.7E-07 1.7E-11 103.8 17.0 122 16-142 42-194 (389)
146 PRK09880 L-idonate 5-dehydroge 98.6 1.6E-07 3.6E-12 107.2 10.8 150 808-968 168-329 (343)
147 PF07224 Chlorophyllase: Chlor 98.6 2.7E-07 5.9E-12 99.0 11.5 115 17-144 33-157 (307)
148 COG3208 GrsT Predicted thioest 98.6 4.7E-07 1E-11 97.0 13.2 138 32-180 6-203 (244)
149 PF05728 UPF0227: Uncharacteri 98.6 2E-06 4.3E-11 90.4 17.1 123 36-179 2-160 (187)
150 PF07991 IlvN: Acetohydroxy ac 98.5 1.7E-07 3.7E-12 94.8 7.8 92 808-899 2-97 (165)
151 COG4099 Predicted peptidase [G 98.5 3.8E-07 8.3E-12 99.0 10.5 154 13-177 170-339 (387)
152 TIGR00561 pntA NAD(P) transhyd 98.5 3.2E-07 6.8E-12 109.2 10.7 92 808-899 162-286 (511)
153 KOG2281|consensus 98.5 6.7E-07 1.4E-11 105.0 12.8 168 6-177 614-826 (867)
154 TIGR00518 alaDH alanine dehydr 98.5 3.9E-07 8.4E-12 105.6 10.5 92 808-899 165-269 (370)
155 KOG3043|consensus 98.5 4.8E-07 1E-11 95.3 9.5 123 54-179 56-190 (242)
156 TIGR01202 bchC 2-desacetyl-2-h 98.5 1.3E-07 2.8E-12 106.6 5.5 147 808-967 143-294 (308)
157 COG3509 LpqC Poly(3-hydroxybut 98.5 6.7E-07 1.5E-11 97.9 10.7 156 10-171 40-208 (312)
158 KOG2624|consensus 98.5 1.8E-06 3.9E-11 100.2 14.7 137 4-143 47-198 (403)
159 COG0657 Aes Esterase/lipase [L 98.5 1.8E-06 4E-11 97.4 14.4 121 16-143 63-190 (312)
160 PF12715 Abhydrolase_7: Abhydr 98.5 1.1E-06 2.5E-11 99.9 12.2 129 5-141 88-257 (390)
161 COG4757 Predicted alpha/beta h 98.5 5.6E-07 1.2E-11 95.0 9.0 113 5-126 5-124 (281)
162 PRK05371 x-prolyl-dipeptidyl a 98.4 2.9E-06 6.4E-11 106.6 16.3 85 56-142 270-371 (767)
163 PRK14189 bifunctional 5,10-met 98.4 9.2E-07 2E-11 98.0 10.3 91 792-899 141-232 (285)
164 PRK14175 bifunctional 5,10-met 98.4 1.3E-06 2.8E-11 97.0 11.3 92 792-900 141-233 (286)
165 PRK14192 bifunctional 5,10-met 98.4 1.2E-06 2.6E-11 97.6 11.1 94 790-900 140-234 (283)
166 COG0596 MhpC Predicted hydrola 98.4 1.5E-06 3.3E-11 90.2 11.2 100 33-145 21-124 (282)
167 cd01075 NAD_bind_Leu_Phe_Val_D 98.4 2.1E-06 4.5E-11 91.3 11.8 87 805-892 23-111 (200)
168 PLN02827 Alcohol dehydrogenase 98.4 7.1E-07 1.5E-11 103.7 8.4 167 808-983 192-378 (378)
169 PF07859 Abhydrolase_3: alpha/ 98.4 1.2E-06 2.7E-11 92.4 9.4 102 36-144 1-110 (211)
170 KOG2100|consensus 98.3 3.7E-06 8.1E-11 105.4 14.5 162 16-179 509-708 (755)
171 KOG1553|consensus 98.3 8.1E-07 1.8E-11 97.8 7.0 154 6-170 215-400 (517)
172 COG1062 AdhC Zn-dependent alco 98.3 1.3E-06 2.8E-11 97.4 8.2 179 789-979 165-364 (366)
173 PF02882 THF_DHG_CYH_C: Tetrah 98.3 3.2E-06 6.9E-11 86.5 10.4 92 791-899 18-110 (160)
174 COG3545 Predicted esterase of 98.3 6.3E-06 1.4E-10 84.3 12.1 136 34-188 3-152 (181)
175 cd05212 NAD_bind_m-THF_DH_Cycl 98.3 5.2E-06 1.1E-10 83.2 11.0 92 792-900 11-103 (140)
176 KOG4627|consensus 98.3 3.3E-06 7.2E-11 87.7 9.5 156 13-180 52-234 (270)
177 PRK05225 ketol-acid reductoiso 98.3 1.1E-06 2.3E-11 101.9 6.4 94 807-900 33-134 (487)
178 TIGR03451 mycoS_dep_FDH mycoth 98.2 2.1E-06 4.5E-11 98.8 8.3 92 808-900 175-279 (358)
179 PRK10792 bifunctional 5,10-met 98.2 6E-06 1.3E-10 91.6 11.3 92 791-899 141-233 (285)
180 TIGR03201 dearomat_had 6-hydro 98.2 2.5E-06 5.5E-11 97.7 8.6 93 808-901 165-276 (349)
181 cd08281 liver_ADH_like1 Zinc-d 98.2 2E-06 4.3E-11 99.5 7.7 152 808-968 190-359 (371)
182 cd01080 NAD_bind_m-THF_DH_Cycl 98.2 5.3E-06 1.2E-10 85.7 10.0 79 805-899 39-118 (168)
183 PF07819 PGAP1: PGAP1-like pro 98.2 8E-06 1.7E-10 88.4 11.8 106 33-144 4-123 (225)
184 PF05677 DUF818: Chlamydia CHL 98.2 7.5E-05 1.6E-09 83.7 19.5 151 5-163 112-300 (365)
185 PRK14194 bifunctional 5,10-met 98.2 6.1E-06 1.3E-10 92.2 10.6 91 792-899 142-233 (301)
186 PRK14176 bifunctional 5,10-met 98.2 6E-06 1.3E-10 91.6 10.5 92 791-899 146-238 (287)
187 PF00975 Thioesterase: Thioest 98.2 5.4E-06 1.2E-10 88.6 9.9 103 35-145 2-105 (229)
188 PRK05479 ketol-acid reductoiso 98.2 4.9E-06 1.1E-10 94.4 9.9 93 807-899 14-110 (330)
189 KOG2551|consensus 98.2 2.5E-05 5.5E-10 82.6 14.4 147 32-182 4-192 (230)
190 TIGR03366 HpnZ_proposed putati 98.2 1.1E-06 2.5E-11 97.5 4.6 91 808-899 119-220 (280)
191 COG2936 Predicted acyl esteras 98.2 6.4E-06 1.4E-10 98.2 10.9 135 4-145 18-160 (563)
192 PLN02740 Alcohol dehydrogenase 98.2 2.9E-06 6.2E-11 98.6 7.9 93 807-900 196-303 (381)
193 PF03959 FSH1: Serine hydrolas 98.2 3.8E-06 8.3E-11 89.9 8.1 146 32-180 3-188 (212)
194 PF08538 DUF1749: Protein of u 98.2 1.9E-05 4.2E-10 88.0 13.6 109 32-143 32-147 (303)
195 cd01079 NAD_bind_m-THF_DH NAD 98.2 5.9E-06 1.3E-10 86.4 8.9 92 805-899 57-158 (197)
196 PRK14191 bifunctional 5,10-met 98.2 7.9E-06 1.7E-10 90.7 10.3 91 792-899 140-231 (285)
197 cd08230 glucose_DH Glucose deh 98.2 3.8E-06 8.2E-11 96.4 8.1 92 808-900 171-272 (355)
198 PF03403 PAF-AH_p_II: Platelet 98.2 6.6E-06 1.4E-10 95.6 10.1 125 31-163 98-284 (379)
199 PRK14170 bifunctional 5,10-met 98.1 9.5E-06 2.1E-10 89.9 10.1 91 792-899 140-231 (284)
200 PRK14169 bifunctional 5,10-met 98.1 1.1E-05 2.3E-10 89.6 10.3 92 791-899 138-230 (282)
201 PF06057 VirJ: Bacterial virul 98.1 1.6E-05 3.5E-10 82.9 11.0 161 35-210 4-189 (192)
202 PRK14190 bifunctional 5,10-met 98.1 1.1E-05 2.3E-10 89.7 10.3 91 792-899 141-232 (284)
203 COG4188 Predicted dienelactone 98.1 1.5E-05 3.3E-10 90.3 11.6 155 13-172 48-270 (365)
204 PF01262 AlaDh_PNT_C: Alanine 98.1 1E-05 2.2E-10 83.5 9.4 92 807-898 17-140 (168)
205 PLN02178 cinnamyl-alcohol dehy 98.1 5.9E-06 1.3E-10 96.0 8.4 147 808-968 177-334 (375)
206 PRK14166 bifunctional 5,10-met 98.1 1.2E-05 2.6E-10 89.1 10.3 92 791-899 139-231 (282)
207 COG1064 AdhP Zn-dependent alco 98.1 3.5E-06 7.5E-11 95.4 6.2 91 808-900 165-262 (339)
208 PRK14177 bifunctional 5,10-met 98.1 1.6E-05 3.4E-10 88.2 10.8 91 792-899 142-233 (284)
209 PRK14171 bifunctional 5,10-met 98.1 1.3E-05 2.8E-10 89.0 10.0 91 792-899 142-233 (288)
210 PLN02733 phosphatidylcholine-s 98.1 8.9E-06 1.9E-10 96.0 9.3 92 52-144 108-201 (440)
211 PRK14172 bifunctional 5,10-met 98.1 1.7E-05 3.7E-10 87.8 10.7 91 792-899 141-232 (278)
212 TIGR02818 adh_III_F_hyde S-(hy 98.1 5.9E-06 1.3E-10 95.5 7.6 92 807-899 183-289 (368)
213 PRK14187 bifunctional 5,10-met 98.1 1.7E-05 3.7E-10 88.4 10.8 91 792-899 143-234 (294)
214 PRK14183 bifunctional 5,10-met 98.1 1.7E-05 3.6E-10 87.9 10.6 91 792-899 140-231 (281)
215 PRK14186 bifunctional 5,10-met 98.1 1.8E-05 3.8E-10 88.4 10.8 92 791-899 140-232 (297)
216 PLN02516 methylenetetrahydrofo 98.1 1.6E-05 3.5E-10 88.8 10.4 92 791-899 149-241 (299)
217 PF01488 Shikimate_DH: Shikima 98.1 1.3E-05 2.7E-10 79.9 8.7 93 807-899 9-111 (135)
218 PRK14173 bifunctional 5,10-met 98.1 1.6E-05 3.4E-10 88.4 10.3 91 792-899 138-229 (287)
219 PLN02897 tetrahydrofolate dehy 98.1 1.5E-05 3.2E-10 90.1 10.0 92 791-899 196-288 (345)
220 PLN02616 tetrahydrofolate dehy 98.1 1.5E-05 3.3E-10 90.4 10.0 92 791-899 213-305 (364)
221 PLN02586 probable cinnamyl alc 98.1 6E-06 1.3E-10 95.3 7.0 147 808-968 182-339 (360)
222 COG0686 Ald Alanine dehydrogen 98.1 9.2E-06 2E-10 89.3 7.9 89 810-898 168-269 (371)
223 PF03446 NAD_binding_2: NAD bi 98.1 1.7E-05 3.6E-10 81.5 9.5 91 811-901 2-98 (163)
224 PRK14180 bifunctional 5,10-met 98.1 2.1E-05 4.5E-10 87.2 10.8 91 792-899 141-232 (282)
225 PRK10309 galactitol-1-phosphat 98.0 7.8E-06 1.7E-10 93.4 7.6 93 808-901 159-264 (347)
226 PRK14178 bifunctional 5,10-met 98.0 1.7E-05 3.7E-10 87.8 9.9 91 792-899 135-226 (279)
227 cd08239 THR_DH_like L-threonin 98.0 9.3E-06 2E-10 92.3 8.2 92 808-900 162-265 (339)
228 cd05191 NAD_bind_amino_acid_DH 98.0 3.3E-05 7.2E-10 70.8 10.2 68 804-896 17-85 (86)
229 PRK14182 bifunctional 5,10-met 98.0 2.3E-05 4.9E-10 86.9 10.8 91 792-899 140-231 (282)
230 cd08237 ribitol-5-phosphate_DH 98.0 3.7E-06 8.1E-11 96.2 4.8 91 808-900 162-259 (341)
231 PRK14181 bifunctional 5,10-met 98.0 2.3E-05 5E-10 87.0 10.8 91 792-899 136-231 (287)
232 TIGR02822 adh_fam_2 zinc-bindi 98.0 8.1E-06 1.8E-10 93.0 7.3 91 808-899 164-256 (329)
233 PRK14193 bifunctional 5,10-met 98.0 2.5E-05 5.4E-10 86.7 10.6 92 791-899 140-234 (284)
234 TIGR02819 fdhA_non_GSH formald 98.0 1E-05 2.2E-10 94.6 8.1 92 807-899 183-301 (393)
235 PRK14188 bifunctional 5,10-met 98.0 2.1E-05 4.5E-10 88.1 10.0 91 791-899 140-232 (296)
236 PRK14184 bifunctional 5,10-met 98.0 2.3E-05 5.1E-10 87.0 10.0 92 791-899 139-235 (286)
237 PRK14185 bifunctional 5,10-met 98.0 3.3E-05 7.3E-10 86.0 10.7 92 791-899 139-235 (293)
238 PRK14179 bifunctional 5,10-met 98.0 3E-05 6.5E-10 86.2 10.3 92 791-899 140-232 (284)
239 PF00756 Esterase: Putative es 98.0 2.9E-05 6.3E-10 84.3 10.1 124 15-143 6-149 (251)
240 PF09752 DUF2048: Uncharacteri 97.9 0.00026 5.6E-09 80.3 17.2 119 17-142 77-208 (348)
241 KOG1515|consensus 97.9 0.00012 2.6E-09 83.5 14.6 128 13-145 70-208 (336)
242 PRK14167 bifunctional 5,10-met 97.9 4.3E-05 9.2E-10 85.4 10.7 91 792-899 140-235 (297)
243 COG0190 FolD 5,10-methylene-te 97.9 2.7E-05 5.8E-10 85.6 8.7 91 792-899 139-230 (283)
244 TIGR01035 hemA glutamyl-tRNA r 97.9 3.4E-05 7.4E-10 91.0 10.3 98 807-905 177-284 (417)
245 PRK14168 bifunctional 5,10-met 97.9 4.1E-05 9E-10 85.5 10.3 91 792-899 144-239 (297)
246 TIGR00465 ilvC ketol-acid redu 97.9 4E-05 8.7E-10 86.9 10.2 91 808-899 1-95 (314)
247 PRK14174 bifunctional 5,10-met 97.9 4.5E-05 9.8E-10 85.3 10.2 91 792-899 142-237 (295)
248 PRK00045 hemA glutamyl-tRNA re 97.9 4.5E-05 9.8E-10 90.1 10.8 93 807-899 179-282 (423)
249 cd08300 alcohol_DH_class_III c 97.9 2E-05 4.4E-10 91.0 7.7 91 808-899 185-290 (368)
250 COG0059 IlvC Ketol-acid reduct 97.9 3.3E-05 7.1E-10 84.9 8.6 94 807-900 15-112 (338)
251 cd01065 NAD_bind_Shikimate_DH 97.9 7E-05 1.5E-09 75.5 10.6 106 795-901 5-120 (155)
252 COG2021 MET2 Homoserine acetyl 97.8 0.00026 5.7E-09 80.3 14.9 109 32-142 50-180 (368)
253 cd05213 NAD_bind_Glutamyl_tRNA 97.8 9.1E-05 2E-09 84.1 11.2 92 808-899 176-275 (311)
254 KOG0022|consensus 97.8 4.6E-05 9.9E-10 84.1 8.2 116 789-906 172-305 (375)
255 PF05990 DUF900: Alpha/beta hy 97.8 0.00013 2.8E-09 79.5 11.8 139 31-173 16-173 (233)
256 cd00312 Esterase_lipase Estera 97.8 6.8E-05 1.5E-09 90.1 10.3 126 15-144 77-213 (493)
257 PF10230 DUF2305: Uncharacteri 97.8 0.00014 3.1E-09 80.7 11.9 108 33-145 2-123 (266)
258 cd08301 alcohol_DH_plants Plan 97.8 3.9E-05 8.4E-10 88.6 7.8 92 808-900 186-292 (369)
259 cd08277 liver_alcohol_DH_like 97.8 4.2E-05 9E-10 88.3 7.9 93 807-900 182-289 (365)
260 PF11339 DUF3141: Protein of u 97.8 0.00035 7.6E-09 81.9 15.1 103 32-144 68-175 (581)
261 cd08238 sorbose_phosphate_red 97.8 5.3E-05 1.2E-09 89.0 8.6 150 808-968 174-355 (410)
262 PRK10439 enterobactin/ferric e 97.8 0.00036 7.9E-09 82.1 15.4 123 15-144 192-323 (411)
263 TIGR01505 tartro_sem_red 2-hyd 97.7 9.5E-05 2.1E-09 82.9 9.1 89 812-900 1-96 (291)
264 PLN02514 cinnamyl-alcohol dehy 97.7 0.00011 2.4E-09 84.7 9.8 93 807-900 178-278 (357)
265 COG3243 PhaC Poly(3-hydroxyalk 97.7 0.00019 4E-09 82.5 11.1 108 33-142 107-215 (445)
266 cd05311 NAD_bind_2_malic_enz N 97.7 0.00029 6.4E-09 76.4 12.2 95 804-899 19-130 (226)
267 COG0373 HemA Glutamyl-tRNA red 97.7 0.00021 4.5E-09 83.2 11.5 93 807-899 175-276 (414)
268 PRK11559 garR tartronate semia 97.7 0.00017 3.8E-09 80.9 10.1 91 811-901 3-100 (296)
269 PLN00203 glutamyl-tRNA reducta 97.7 0.00017 3.7E-09 86.8 10.4 92 808-899 264-371 (519)
270 PF01674 Lipase_2: Lipase (cla 97.6 4.8E-05 1E-09 81.8 4.7 89 35-128 3-96 (219)
271 TIGR01849 PHB_depoly_PhaZ poly 97.6 0.001 2.2E-08 77.8 15.8 123 8-143 79-207 (406)
272 KOG0023|consensus 97.6 0.00015 3.2E-09 80.5 8.4 101 805-907 178-289 (360)
273 PRK00258 aroE shikimate 5-dehy 97.6 0.00025 5.3E-09 79.3 10.3 105 794-898 107-222 (278)
274 PF06028 DUF915: Alpha/beta hy 97.6 0.00071 1.5E-08 74.6 13.5 134 35-173 13-210 (255)
275 PRK04439 S-adenosylmethionine 97.6 0.0096 2.1E-07 68.3 22.0 305 185-516 20-383 (399)
276 PLN03154 putative allyl alcoho 97.6 0.00022 4.7E-09 82.1 9.1 91 808-900 157-261 (348)
277 PRK07502 cyclohexadienyl dehyd 97.6 0.00023 5E-09 80.5 9.0 92 810-901 6-104 (307)
278 PLN02712 arogenate dehydrogena 97.6 0.00027 5.8E-09 87.9 10.3 97 803-900 362-463 (667)
279 cd08233 butanediol_DH_like (2R 97.5 0.00023 5.1E-09 81.4 9.2 93 808-901 171-276 (351)
280 PF01941 AdoMet_Synthase: S-ad 97.5 0.0098 2.1E-07 68.2 21.7 306 187-515 22-382 (396)
281 PRK15461 NADH-dependent gamma- 97.5 0.00031 6.7E-09 79.2 9.8 91 811-901 2-99 (296)
282 PF00107 ADH_zinc_N: Zinc-bind 97.5 0.00011 2.4E-09 71.6 5.4 86 820-906 1-99 (130)
283 PF13241 NAD_binding_7: Putati 97.5 9.1E-05 2E-09 70.3 4.5 90 807-901 4-95 (103)
284 PF00151 Lipase: Lipase; Inte 97.5 0.00017 3.7E-09 82.5 7.5 114 31-148 69-191 (331)
285 cd01076 NAD_bind_1_Glu_DH NAD( 97.5 0.00047 1E-08 74.8 10.4 96 805-904 26-141 (227)
286 TIGR01470 cysG_Nterm siroheme 97.5 0.00022 4.8E-09 76.1 7.7 93 806-899 5-102 (205)
287 PRK07417 arogenate dehydrogena 97.5 0.00022 4.7E-09 79.7 7.8 91 812-902 2-96 (279)
288 KOG3847|consensus 97.5 0.00044 9.6E-09 76.2 9.6 122 31-160 116-294 (399)
289 PF12048 DUF3530: Protein of u 97.5 0.0043 9.3E-08 70.5 17.8 149 8-163 65-256 (310)
290 COG2084 MmsB 3-hydroxyisobutyr 97.5 0.00036 7.9E-09 77.7 8.8 91 811-901 1-99 (286)
291 PRK10083 putative oxidoreducta 97.4 0.00031 6.8E-09 79.7 8.5 92 808-900 159-262 (339)
292 PF03583 LIP: Secretory lipase 97.4 0.0019 4.1E-08 72.7 14.4 85 56-143 17-112 (290)
293 PRK07340 ornithine cyclodeamin 97.4 0.00065 1.4E-08 77.0 10.6 99 808-910 123-233 (304)
294 PRK14982 acyl-ACP reductase; P 97.4 0.00065 1.4E-08 77.7 10.5 92 805-899 150-248 (340)
295 PRK09260 3-hydroxybutyryl-CoA 97.4 0.00033 7.1E-09 78.6 7.8 90 811-900 2-121 (288)
296 PRK13940 glutamyl-tRNA reducta 97.4 0.00092 2E-08 78.7 11.6 91 807-899 178-275 (414)
297 PRK10252 entF enterobactin syn 97.4 0.00056 1.2E-08 91.6 11.0 101 33-144 1068-1171(1296)
298 PF00135 COesterase: Carboxyle 97.4 0.00067 1.5E-08 81.7 10.7 128 16-144 108-245 (535)
299 PLN02256 arogenate dehydrogena 97.4 0.00069 1.5E-08 76.7 9.7 91 809-900 35-130 (304)
300 PRK08618 ornithine cyclodeamin 97.4 0.0011 2.3E-08 75.9 11.2 98 809-909 126-236 (325)
301 PRK06718 precorrin-2 dehydroge 97.3 0.00057 1.2E-08 72.9 8.3 92 806-899 6-102 (202)
302 COG3319 Thioesterase domains o 97.3 0.001 2.2E-08 73.3 10.4 103 34-145 1-104 (257)
303 cd08231 MDR_TM0436_like Hypoth 97.3 0.0005 1.1E-08 79.0 8.5 92 808-900 176-283 (361)
304 PRK12490 6-phosphogluconate de 97.3 0.00068 1.5E-08 76.5 9.2 87 812-899 2-96 (299)
305 COG0604 Qor NADPH:quinone redu 97.3 0.00075 1.6E-08 77.2 9.6 102 796-900 130-244 (326)
306 PRK07066 3-hydroxybutyryl-CoA 97.3 0.00089 1.9E-08 76.3 10.0 88 811-898 8-120 (321)
307 PLN02545 3-hydroxybutyryl-CoA 97.3 0.00068 1.5E-08 76.2 9.0 89 811-899 5-122 (295)
308 cd01078 NAD_bind_H4MPT_DH NADP 97.3 0.0014 2.9E-08 69.2 10.7 95 805-899 23-131 (194)
309 cd08242 MDR_like Medium chain 97.3 0.00048 1E-08 77.5 7.7 92 807-899 153-247 (319)
310 KOG2112|consensus 97.3 0.0014 3.1E-08 69.1 10.5 137 33-176 3-167 (206)
311 cd08296 CAD_like Cinnamyl alco 97.3 0.00041 8.9E-09 78.8 7.0 92 808-900 162-262 (333)
312 PTZ00472 serine carboxypeptida 97.3 0.004 8.6E-08 74.6 15.3 134 6-144 50-216 (462)
313 cd05313 NAD_bind_2_Glu_DH NAD( 97.3 0.00089 1.9E-08 73.6 8.9 100 805-906 33-161 (254)
314 PRK14031 glutamate dehydrogena 97.3 0.0012 2.5E-08 78.0 10.2 104 805-909 223-353 (444)
315 PRK07530 3-hydroxybutyryl-CoA 97.3 0.0011 2.3E-08 74.6 9.7 90 811-900 5-123 (292)
316 PRK12861 malic enzyme; Reviewe 97.2 0.0019 4.2E-08 80.5 12.6 127 769-908 155-299 (764)
317 KOG3975|consensus 97.2 0.018 3.8E-07 62.3 17.8 108 31-143 27-146 (301)
318 cd08265 Zn_ADH3 Alcohol dehydr 97.2 0.0009 1.9E-08 77.9 9.0 95 807-901 201-311 (384)
319 PRK09599 6-phosphogluconate de 97.2 0.0011 2.4E-08 74.8 9.4 88 812-900 2-97 (301)
320 TIGR02992 ectoine_eutC ectoine 97.2 0.002 4.3E-08 73.7 11.5 98 809-909 128-239 (326)
321 PF08840 BAAT_C: BAAT / Acyl-C 97.2 0.0011 2.5E-08 71.1 8.9 80 91-173 4-135 (213)
322 TIGR00670 asp_carb_tr aspartat 97.2 0.087 1.9E-06 59.7 24.2 131 770-908 116-274 (301)
323 PRK12862 malic enzyme; Reviewe 97.2 0.0026 5.6E-08 80.0 13.1 129 769-910 159-305 (763)
324 KOG2931|consensus 97.2 0.0023 4.9E-08 70.6 11.0 128 6-144 23-157 (326)
325 TIGR02371 ala_DH_arch alanine 97.2 0.0019 4E-08 73.9 11.0 98 809-909 127-237 (325)
326 PF02737 3HCDH_N: 3-hydroxyacy 97.2 0.0012 2.5E-08 69.2 8.3 94 812-909 1-123 (180)
327 cd05211 NAD_bind_Glu_Leu_Phe_V 97.2 0.0024 5.1E-08 68.9 10.7 83 805-888 18-119 (217)
328 PF03807 F420_oxidored: NADP o 97.1 0.0017 3.7E-08 60.2 8.3 84 812-896 1-93 (96)
329 PRK09414 glutamate dehydrogena 97.1 0.0016 3.5E-08 76.9 9.8 100 805-906 227-351 (445)
330 TIGR02825 B4_12hDH leukotriene 97.1 0.0014 3E-08 74.2 9.1 90 808-899 137-239 (325)
331 PRK06719 precorrin-2 dehydroge 97.1 0.0013 2.9E-08 67.3 8.0 89 806-897 9-100 (157)
332 TIGR00507 aroE shikimate 5-deh 97.1 0.0027 5.8E-08 70.7 10.9 107 794-901 102-218 (270)
333 PRK14030 glutamate dehydrogena 97.1 0.0018 3.9E-08 76.3 9.8 100 805-906 223-351 (445)
334 PLN02712 arogenate dehydrogena 97.1 0.0015 3.4E-08 81.2 9.7 92 809-901 51-147 (667)
335 PRK07232 bifunctional malic en 97.1 0.0036 7.8E-08 78.3 12.8 129 769-910 151-297 (752)
336 PRK06545 prephenate dehydrogen 97.1 0.0011 2.4E-08 76.8 7.7 92 811-902 1-100 (359)
337 PRK00779 ornithine carbamoyltr 97.1 0.057 1.2E-06 61.3 21.2 130 770-908 119-278 (304)
338 PRK04940 hypothetical protein; 97.1 0.0094 2E-07 62.2 13.5 68 107-179 60-150 (180)
339 PRK08507 prephenate dehydrogen 97.1 0.0017 3.7E-08 72.3 8.7 89 812-902 2-96 (275)
340 PRK08268 3-hydroxy-acyl-CoA de 97.1 0.002 4.3E-08 78.0 9.8 89 811-900 8-126 (507)
341 PRK07819 3-hydroxybutyryl-CoA 97.0 0.002 4.4E-08 72.3 9.1 88 811-899 6-123 (286)
342 PLN02527 aspartate carbamoyltr 97.0 0.12 2.7E-06 58.6 23.3 131 770-908 117-277 (306)
343 TIGR01809 Shik-DH-AROM shikima 97.0 0.0039 8.4E-08 69.9 11.2 83 794-876 108-201 (282)
344 COG2272 PnbA Carboxylesterase 97.0 0.0015 3.3E-08 76.7 8.1 124 16-144 79-217 (491)
345 TIGR01692 HIBADH 3-hydroxyisob 97.0 0.0016 3.4E-08 73.2 8.0 86 815-900 1-93 (288)
346 PRK06823 ornithine cyclodeamin 97.0 0.0038 8.2E-08 71.1 11.2 98 809-909 127-237 (315)
347 COG1770 PtrB Protease II [Amin 97.0 0.0046 1E-07 74.6 12.0 171 4-179 418-635 (682)
348 PRK06141 ornithine cyclodeamin 97.0 0.0034 7.5E-08 71.4 10.7 98 808-908 123-233 (314)
349 PLN02477 glutamate dehydrogena 97.0 0.0025 5.4E-08 74.7 9.7 97 804-904 200-316 (410)
350 PF03096 Ndr: Ndr family; Int 97.0 0.0028 6E-08 70.4 9.5 126 8-145 2-135 (283)
351 PTZ00079 NADP-specific glutama 97.0 0.0029 6.2E-08 74.6 10.2 101 804-906 231-360 (454)
352 cd08293 PTGR2 Prostaglandin re 97.0 0.0026 5.5E-08 72.5 9.7 87 810-898 155-255 (345)
353 cd08299 alcohol_DH_class_I_II_ 97.0 0.0028 6E-08 73.7 10.0 93 807-900 188-295 (373)
354 PRK15059 tartronate semialdehy 97.0 0.0027 5.7E-08 71.6 9.3 88 812-900 2-96 (292)
355 cd08285 NADP_ADH NADP(H)-depen 97.0 0.0021 4.5E-08 73.6 8.5 93 808-901 165-270 (351)
356 PRK06035 3-hydroxyacyl-CoA deh 97.0 0.0033 7.3E-08 70.6 10.0 89 811-899 4-123 (291)
357 PRK12549 shikimate 5-dehydroge 97.0 0.003 6.4E-08 70.9 9.4 80 794-874 112-201 (284)
358 TIGR01546 GAPDH-II_archae glyc 96.9 0.0029 6.2E-08 72.3 9.2 83 813-895 1-106 (333)
359 COG0281 SfcA Malic enzyme [Ene 96.9 0.0067 1.5E-07 70.1 12.1 130 769-911 165-314 (432)
360 PRK14618 NAD(P)H-dependent gly 96.9 0.0039 8.4E-08 71.2 10.3 86 811-898 5-105 (328)
361 smart00824 PKS_TE Thioesterase 96.9 0.009 1.9E-07 61.8 12.2 88 53-144 14-102 (212)
362 cd08295 double_bond_reductase_ 96.9 0.0038 8.3E-08 71.1 10.1 91 807-899 149-253 (338)
363 TIGR02279 PaaC-3OHAcCoADH 3-hy 96.9 0.0032 6.9E-08 76.1 9.8 91 809-900 4-124 (503)
364 PRK06046 alanine dehydrogenase 96.9 0.0053 1.2E-07 70.3 11.0 97 809-909 128-238 (326)
365 cd08284 FDH_like_2 Glutathione 96.9 0.0023 4.9E-08 72.8 8.0 93 807-900 165-269 (344)
366 PRK08293 3-hydroxybutyryl-CoA 96.9 0.0036 7.8E-08 70.2 9.4 88 811-898 4-122 (287)
367 cd08283 FDH_like_1 Glutathione 96.9 0.0024 5.2E-08 74.5 8.2 93 808-900 183-309 (386)
368 PRK02102 ornithine carbamoyltr 96.9 0.17 3.8E-06 58.0 22.7 121 770-899 122-275 (331)
369 PRK06407 ornithine cyclodeamin 96.9 0.0061 1.3E-07 69.0 11.0 98 809-909 116-227 (301)
370 PRK08655 prephenate dehydrogen 96.9 0.0036 7.9E-08 74.4 9.6 88 812-900 2-95 (437)
371 TIGR00872 gnd_rel 6-phosphoglu 96.9 0.0037 8.1E-08 70.6 9.3 88 812-900 2-96 (298)
372 PF00208 ELFV_dehydrog: Glutam 96.8 0.0052 1.1E-07 67.5 10.0 98 807-906 29-154 (244)
373 PF02423 OCD_Mu_crystall: Orni 96.8 0.0034 7.4E-08 71.4 8.9 97 810-909 128-239 (313)
374 KOG2565|consensus 96.8 0.0051 1.1E-07 69.5 9.8 115 16-138 135-258 (469)
375 cd08287 FDH_like_ADH3 formalde 96.8 0.003 6.5E-08 71.9 8.4 92 808-900 167-271 (345)
376 PLN02688 pyrroline-5-carboxyla 96.8 0.0045 9.7E-08 68.4 9.4 85 812-897 2-95 (266)
377 COG4782 Uncharacterized protei 96.8 0.01 2.2E-07 67.5 11.8 129 32-164 115-261 (377)
378 COG0334 GdhA Glutamate dehydro 96.8 0.005 1.1E-07 71.2 9.3 100 805-908 202-321 (411)
379 cd08256 Zn_ADH2 Alcohol dehydr 96.8 0.0039 8.4E-08 71.3 8.6 93 807-900 172-277 (350)
380 PRK11891 aspartate carbamoyltr 96.7 0.25 5.4E-06 58.4 23.4 131 760-899 195-357 (429)
381 cd05188 MDR Medium chain reduc 96.7 0.005 1.1E-07 66.6 8.9 93 807-900 132-235 (271)
382 PRK00856 pyrB aspartate carbam 96.7 0.14 2.9E-06 58.3 20.5 129 770-908 122-275 (305)
383 cd05279 Zn_ADH1 Liver alcohol 96.7 0.0032 6.8E-08 72.8 7.6 92 807-899 181-287 (365)
384 cd08255 2-desacetyl-2-hydroxye 96.7 0.0048 1E-07 67.9 8.7 93 807-900 95-193 (277)
385 PRK05808 3-hydroxybutyryl-CoA 96.7 0.0052 1.1E-07 68.7 8.9 88 811-898 4-120 (282)
386 COG0287 TyrA Prephenate dehydr 96.7 0.0034 7.5E-08 70.1 7.4 93 810-903 3-104 (279)
387 PF02254 TrkA_N: TrkA-N domain 96.7 0.0051 1.1E-07 59.0 7.6 83 813-895 1-94 (116)
388 cd08274 MDR9 Medium chain dehy 96.7 0.0034 7.3E-08 71.5 7.5 89 808-899 176-275 (350)
389 PRK01713 ornithine carbamoyltr 96.7 0.2 4.3E-06 57.6 21.7 129 761-899 115-277 (334)
390 PRK03515 ornithine carbamoyltr 96.7 0.23 5E-06 57.1 22.1 122 770-899 121-277 (336)
391 cd08294 leukotriene_B4_DH_like 96.7 0.006 1.3E-07 68.7 9.3 90 808-899 142-243 (329)
392 PRK05562 precorrin-2 dehydroge 96.7 0.0049 1.1E-07 66.6 8.0 92 805-897 20-116 (223)
393 PLN02342 ornithine carbamoyltr 96.7 0.24 5.2E-06 57.2 22.1 130 770-908 161-320 (348)
394 cd05283 CAD1 Cinnamyl alcohol 96.7 0.0073 1.6E-07 68.8 10.0 93 808-901 168-267 (337)
395 COG1712 Predicted dinucleotide 96.7 0.0043 9.3E-08 66.1 7.2 88 812-900 2-96 (255)
396 PRK04284 ornithine carbamoyltr 96.7 0.27 5.9E-06 56.5 22.5 128 761-899 114-276 (332)
397 TIGR03026 NDP-sugDHase nucleot 96.7 0.0054 1.2E-07 72.4 9.0 89 812-900 2-123 (411)
398 PF05057 DUF676: Putative seri 96.7 0.0058 1.3E-07 65.9 8.5 20 107-126 78-97 (217)
399 PRK07589 ornithine cyclodeamin 96.6 0.011 2.3E-07 68.2 11.0 98 809-909 128-240 (346)
400 KOG3101|consensus 96.6 0.002 4.4E-08 67.6 4.6 124 16-143 27-175 (283)
401 cd05281 TDH Threonine dehydrog 96.6 0.0051 1.1E-07 70.1 8.4 92 808-900 162-265 (341)
402 cd08278 benzyl_alcohol_DH Benz 96.6 0.0076 1.7E-07 69.7 10.0 91 808-899 185-287 (365)
403 PRK09310 aroDE bifunctional 3- 96.6 0.0071 1.5E-07 72.8 9.9 82 794-876 317-401 (477)
404 cd08254 hydroxyacyl_CoA_DH 6-h 96.6 0.0033 7.2E-08 70.9 6.8 93 807-900 163-266 (338)
405 cd08291 ETR_like_1 2-enoyl thi 96.6 0.009 2E-07 67.6 10.3 89 809-899 142-244 (324)
406 PRK03369 murD UDP-N-acetylmura 96.6 0.0069 1.5E-07 73.1 9.8 69 808-876 10-81 (488)
407 PRK06129 3-hydroxyacyl-CoA deh 96.6 0.0075 1.6E-07 68.4 9.6 66 811-876 3-93 (308)
408 COG1075 LipA Predicted acetylt 96.6 0.0061 1.3E-07 70.1 8.8 104 33-145 59-165 (336)
409 cd08282 PFDH_like Pseudomonas 96.6 0.0075 1.6E-07 70.0 9.7 91 808-899 175-287 (375)
410 cd08262 Zn_ADH8 Alcohol dehydr 96.6 0.004 8.6E-08 70.8 7.2 91 808-899 160-266 (341)
411 cd08289 MDR_yhfp_like Yhfp put 96.6 0.0054 1.2E-07 69.0 8.2 89 809-899 146-245 (326)
412 PLN02858 fructose-bisphosphate 96.6 0.006 1.3E-07 81.6 9.7 92 809-900 3-101 (1378)
413 PRK11199 tyrA bifunctional cho 96.6 0.0047 1E-07 72.0 7.7 80 809-902 97-180 (374)
414 PLN02858 fructose-bisphosphate 96.6 0.0062 1.4E-07 81.5 9.7 92 809-900 323-421 (1378)
415 PRK08291 ectoine utilization p 96.6 0.012 2.7E-07 67.4 10.9 98 809-909 131-242 (330)
416 COG1505 Serine proteases of th 96.5 0.0049 1.1E-07 73.6 7.5 169 3-178 392-605 (648)
417 PRK07531 bifunctional 3-hydrox 96.5 0.0091 2E-07 72.2 10.1 88 811-898 5-117 (495)
418 KOG2237|consensus 96.5 0.0035 7.6E-08 75.1 6.3 169 4-177 440-656 (712)
419 PRK13302 putative L-aspartate 96.5 0.0066 1.4E-07 67.7 8.2 86 810-896 6-97 (271)
420 cd05284 arabinose_DH_like D-ar 96.5 0.012 2.6E-07 66.8 10.4 93 807-900 165-269 (340)
421 cd08232 idonate-5-DH L-idonate 96.5 0.0076 1.7E-07 68.4 8.8 91 809-900 165-265 (339)
422 cd05312 NAD_bind_1_malic_enz N 96.5 0.023 5E-07 63.2 12.1 120 791-910 3-155 (279)
423 PRK06130 3-hydroxybutyryl-CoA 96.5 0.0078 1.7E-07 68.2 8.7 88 811-898 5-117 (311)
424 cd08234 threonine_DH_like L-th 96.5 0.0076 1.7E-07 68.1 8.6 92 808-900 158-260 (334)
425 cd08286 FDH_like_ADH2 formalde 96.5 0.0087 1.9E-07 68.2 9.1 92 808-900 165-269 (345)
426 PRK14806 bifunctional cyclohex 96.5 0.0066 1.4E-07 76.9 8.9 92 811-902 4-102 (735)
427 cd08246 crotonyl_coA_red croto 96.5 0.0093 2E-07 69.6 9.4 90 808-899 192-317 (393)
428 TIGR00658 orni_carb_tr ornithi 96.5 0.37 8E-06 54.8 21.7 130 770-908 115-277 (304)
429 KOG0067|consensus 96.5 0.0028 6.2E-08 71.5 4.5 101 807-909 175-280 (435)
430 PRK00094 gpsA NAD(P)H-dependen 96.4 0.012 2.5E-07 66.8 9.6 86 812-897 3-105 (325)
431 PRK14619 NAD(P)H-dependent gly 96.4 0.0092 2E-07 67.7 8.6 77 809-898 3-83 (308)
432 COG0569 TrkA K+ transport syst 96.4 0.0072 1.6E-07 65.6 7.4 66 811-876 1-77 (225)
433 cd08270 MDR4 Medium chain dehy 96.4 0.012 2.7E-07 65.3 9.4 90 809-900 132-225 (305)
434 PRK14805 ornithine carbamoyltr 96.4 0.45 9.8E-06 54.0 21.8 129 770-908 114-274 (302)
435 PRK02255 putrescine carbamoylt 96.4 0.28 6E-06 56.6 20.3 131 770-908 118-285 (338)
436 PRK12562 ornithine carbamoyltr 96.4 0.52 1.1E-05 54.2 22.4 122 770-899 121-277 (334)
437 PRK12491 pyrroline-5-carboxyla 96.4 0.012 2.6E-07 65.7 9.1 97 811-910 3-107 (272)
438 PRK08818 prephenate dehydrogen 96.4 0.0099 2.2E-07 69.0 8.5 87 807-904 1-95 (370)
439 PRK10637 cysG siroheme synthas 96.4 0.0091 2E-07 71.5 8.4 92 806-898 8-104 (457)
440 COG0169 AroE Shikimate 5-dehyd 96.3 0.012 2.5E-07 66.0 8.6 103 794-899 109-228 (283)
441 PF05577 Peptidase_S28: Serine 96.3 0.044 9.5E-07 65.1 14.1 107 33-145 29-149 (434)
442 COG2423 Predicted ornithine cy 96.3 0.018 3.9E-07 65.7 10.3 99 809-910 129-241 (330)
443 PRK00676 hemA glutamyl-tRNA re 96.3 0.014 3.1E-07 66.7 9.3 88 807-899 171-263 (338)
444 cd05280 MDR_yhdh_yhfp Yhdh and 96.3 0.017 3.6E-07 64.8 9.8 90 809-900 146-246 (325)
445 TIGR01751 crot-CoA-red crotony 96.3 0.0094 2E-07 69.8 8.0 91 807-899 187-312 (398)
446 PRK12548 shikimate 5-dehydroge 96.3 0.017 3.7E-07 65.0 9.6 49 794-843 111-160 (289)
447 PF10340 DUF2424: Protein of u 96.3 0.025 5.4E-07 65.4 10.9 112 32-146 121-237 (374)
448 PRK15057 UDP-glucose 6-dehydro 96.3 0.013 2.9E-07 68.6 9.0 88 812-900 2-120 (388)
449 cd08260 Zn_ADH6 Alcohol dehydr 96.3 0.013 2.8E-07 66.8 8.7 92 808-900 164-267 (345)
450 PRK13814 pyrB aspartate carbam 96.2 0.4 8.6E-06 54.7 20.4 130 771-908 124-277 (310)
451 cd08245 CAD Cinnamyl alcohol d 96.2 0.012 2.7E-07 66.3 8.4 92 807-899 160-258 (330)
452 PRK07680 late competence prote 96.2 0.015 3.3E-07 64.7 9.0 86 812-898 2-97 (273)
453 cd08240 6_hydroxyhexanoate_dh_ 96.2 0.017 3.7E-07 66.0 9.6 91 809-900 175-277 (350)
454 PLN02350 phosphogluconate dehy 96.2 0.011 2.4E-07 71.1 8.2 89 812-900 8-110 (493)
455 PRK11880 pyrroline-5-carboxyla 96.2 0.013 2.9E-07 64.7 8.4 66 811-876 3-73 (267)
456 PLN02702 L-idonate 5-dehydroge 96.2 0.014 3E-07 67.3 8.8 91 808-899 180-287 (364)
457 KOG3253|consensus 96.2 0.013 2.8E-07 69.8 8.3 139 32-180 175-331 (784)
458 cd08269 Zn_ADH9 Alcohol dehydr 96.2 0.019 4.1E-07 64.0 9.5 91 808-899 128-231 (312)
459 COG1648 CysG Siroheme synthase 96.2 0.0087 1.9E-07 64.2 6.3 94 806-900 8-106 (210)
460 PRK14027 quinate/shikimate deh 96.2 0.016 3.5E-07 65.0 8.8 80 794-874 112-203 (283)
461 PRK11064 wecC UDP-N-acetyl-D-m 96.2 0.017 3.7E-07 68.3 9.3 89 811-900 4-122 (415)
462 PRK12771 putative glutamate sy 96.2 0.009 2E-07 73.4 7.3 70 808-877 135-234 (564)
463 cd08252 AL_MDR Arginate lyase 96.2 0.017 3.6E-07 65.3 8.9 90 810-900 150-251 (336)
464 COG3288 PntA NAD/NADP transhyd 96.1 0.0078 1.7E-07 66.7 5.8 93 807-899 161-283 (356)
465 PLN02606 palmitoyl-protein thi 96.1 0.033 7.2E-07 62.5 10.8 106 32-145 26-133 (306)
466 cd00762 NAD_bind_malic_enz NAD 96.1 0.11 2.4E-06 57.2 14.5 122 790-911 2-157 (254)
467 TIGR02354 thiF_fam2 thiamine b 96.1 0.028 6E-07 60.0 9.7 93 807-899 18-147 (200)
468 COG4814 Uncharacterized protei 96.1 0.03 6.4E-07 60.9 9.8 108 32-145 45-177 (288)
469 cd08298 CAD2 Cinnamyl alcohol 96.1 0.016 3.4E-07 65.5 8.3 91 807-898 165-257 (329)
470 PF02450 LCAT: Lecithin:choles 96.1 0.016 3.5E-07 67.9 8.7 85 53-144 66-160 (389)
471 TIGR01724 hmd_rel H2-forming N 96.1 0.057 1.2E-06 61.0 12.3 119 821-939 31-164 (341)
472 PRK12749 quinate/shikimate deh 96.1 0.025 5.4E-07 63.7 9.7 80 794-874 109-205 (288)
473 TIGR02823 oxido_YhdH putative 96.1 0.019 4.1E-07 64.6 8.8 90 808-899 143-243 (323)
474 PTZ00317 NADP-dependent malic 96.0 0.11 2.3E-06 62.8 15.1 125 786-910 270-431 (559)
475 cd08263 Zn_ADH10 Alcohol dehyd 96.0 0.013 2.8E-07 67.6 7.4 91 808-899 186-289 (367)
476 TIGR00692 tdh L-threonine 3-de 96.0 0.021 4.6E-07 65.0 9.0 91 808-899 160-263 (340)
477 cd08279 Zn_ADH_class_III Class 96.0 0.015 3.3E-07 67.1 7.8 93 807-900 180-285 (363)
478 PRK05396 tdh L-threonine 3-deh 96.0 0.02 4.4E-07 65.1 8.7 93 808-901 162-267 (341)
479 PLN02520 bifunctional 3-dehydr 96.0 0.023 5E-07 69.2 9.6 81 794-874 354-448 (529)
480 cd05285 sorbitol_DH Sorbitol d 96.0 0.018 4E-07 65.6 8.3 93 807-900 160-268 (343)
481 cd08292 ETR_like_2 2-enoyl thi 96.0 0.029 6.2E-07 63.0 9.7 91 807-899 137-240 (324)
482 cd00741 Lipase Lipase. Lipase 96.0 0.034 7.3E-07 56.2 9.3 80 89-168 10-98 (153)
483 PRK06199 ornithine cyclodeamin 96.0 0.035 7.7E-07 64.8 10.7 93 809-906 154-266 (379)
484 PRK15182 Vi polysaccharide bio 96.0 0.02 4.4E-07 67.8 8.8 88 811-900 7-123 (425)
485 PRK06476 pyrroline-5-carboxyla 96.0 0.024 5.1E-07 62.6 8.7 86 812-899 2-95 (258)
486 COG2130 Putative NADP-dependen 95.9 0.033 7.2E-07 62.0 9.4 105 792-899 134-251 (340)
487 KOG4230|consensus 95.9 0.02 4.3E-07 67.6 8.0 90 793-899 146-236 (935)
488 PF01210 NAD_Gly3P_dh_N: NAD-d 95.9 0.028 6.1E-07 57.4 8.4 87 812-898 1-104 (157)
489 cd05282 ETR_like 2-enoyl thioe 95.9 0.026 5.5E-07 63.3 8.9 92 807-900 136-240 (323)
490 COG2085 Predicted dinucleotide 95.8 0.029 6.2E-07 59.8 8.2 88 811-899 2-95 (211)
491 PRK09422 ethanol-active dehydr 95.8 0.029 6.2E-07 63.6 8.7 93 807-900 160-264 (338)
492 PRK14106 murD UDP-N-acetylmura 95.8 0.021 4.7E-07 67.9 8.0 68 808-875 3-78 (450)
493 PTZ00142 6-phosphogluconate de 95.8 0.026 5.7E-07 67.6 8.6 88 811-899 2-103 (470)
494 PRK07679 pyrroline-5-carboxyla 95.8 0.041 8.8E-07 61.5 9.6 87 810-896 3-98 (279)
495 PRK13529 malate dehydrogenase; 95.8 0.24 5.2E-06 60.0 16.4 125 786-910 268-432 (563)
496 KOG0089|consensus 95.8 0.03 6.5E-07 61.1 8.0 104 791-901 148-252 (309)
497 COG0345 ProC Pyrroline-5-carbo 95.8 0.036 7.7E-07 61.5 8.9 94 811-909 2-104 (266)
498 PRK13304 L-aspartate dehydroge 95.7 0.029 6.2E-07 62.4 8.2 83 812-895 3-90 (265)
499 cd08244 MDR_enoyl_red Possible 95.7 0.049 1.1E-06 61.0 10.1 91 808-900 141-244 (324)
500 PLN02633 palmitoyl protein thi 95.7 0.06 1.3E-06 60.6 10.3 106 32-145 25-132 (314)
No 1
>COG0192 MetK S-adenosylmethionine synthetase [Coenzyme metabolism]
Probab=100.00 E-value=2.1e-158 Score=1266.38 Aligned_cols=382 Identities=65% Similarity=1.079 Sum_probs=373.1
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNID 261 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~ 261 (1027)
..+|++|++++|||||+||||+|+|+|++|++||++|+||||++++|+|+|+|||+|++++|+++++|++|++|||+..+
T Consensus 4 ~~lFTSESVseGHPDKi~DqISDaILD~~L~~Dp~srVAcEt~v~tg~v~i~GEitt~~~vd~~~~~r~~I~~IGY~~~~ 83 (388)
T COG0192 4 YFLFTSESVSEGHPDKICDQISDAILDAILKQDPNSRVACETLVTTGLVVIAGEITTSAYVDIVNIARKTIKEIGYTESD 83 (388)
T ss_pred cceeeeccccCCCChHHHHHHhHHHHHHHHhcCCCceEEEEEEEecCeEEEEEEEecCccccHHHHHHHHHHHhCCCccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q psy15208 262 YGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPW 341 (1027)
Q Consensus 262 ~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~ 341 (1027)
+|||+++|+|+++|++|||||+|||++..++.+++|||||||||||||||||+||||||+|||+|++|++++||+|.+||
T Consensus 84 ~Gfd~~t~~vl~~i~~QSpDIaqgVd~~~~~~~~~GAGDQGimFGyA~~ET~~lMPlpI~lAH~l~~r~a~~Rk~g~l~~ 163 (388)
T COG0192 84 YGFDAKTCAVLVAIGEQSPDIAQGVDEADEELDEIGAGDQGIMFGYACNETPELMPLPISLAHRLLRRLAEVRKNGELPW 163 (388)
T ss_pred cCcCccceEEEeecccCChhHHHhhhhcccchhhcCCCcceeEeeeecCCcccccChHHHHHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999875444579999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEec-CCceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCCCCc
Q psy15208 342 LRPDAKSQVTLRYD-NGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGD 419 (1027)
Q Consensus 342 ~~pd~k~qv~~~y~-~~~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp~~d 419 (1027)
||||+||||||+|+ +++|++|++||+||||++++++++||+.++|+||+|++|++++ ++|+|+||||||||||||+||
T Consensus 164 LrpD~KsQVtv~Y~~~~~p~~idtIvvStQH~~~i~~~~l~~~v~e~iI~pv~~~~~l~~~tk~~INPtGrFViGGP~gD 243 (388)
T COG0192 164 LRPDAKSQVTVEYEDNGKPVRIDTIVVSTQHDPDISQEQLREDVIEEIIKPVLPEELLDDKTKYFINPTGRFVIGGPQGD 243 (388)
T ss_pred cCCCcceeEEEEEcCCCCceeEEEEEEEeccCcccCHHHHHHHHHHHHHhhhccHhhcCcCceEEECCCCCeeeCCCCcc
Confidence 99999999999999 5999999999999999999999999999999999999999887 689999999999999999999
Q ss_pred cccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeecCCC
Q psy15208 420 CGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSFGSG 499 (1027)
Q Consensus 420 ~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~~t~ 499 (1027)
||||||||||||||||+|||||||||||||||||||||+||||||||||||||+|||||||||||+++|+||+||||||+
T Consensus 244 ~GLTGRKIIVDTYGG~a~HGGGAFSGKDptKVDRSaAYaARyvAKNiVAAglA~~ceVQlsYAIGva~PvSi~VdtfgT~ 323 (388)
T COG0192 244 AGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADRCEVQLSYAIGVAEPVSISVDTFGTG 323 (388)
T ss_pred ccCccceEEEEcCCCccCCCCccCCCCCCcccchHHHHHHHHHHHHHHHhhhhhheEEEEEeEecccCceEEEEEccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccCC
Q psy15208 500 KISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSAD 564 (1027)
Q Consensus 500 ~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~~ 564 (1027)
++|+++|+++|+++|||||++||++|+|++|||++||+||||||++ +|||||+||++.||+++.
T Consensus 324 kvse~~i~~~v~~~FdlrP~gIi~~LdL~~piY~~tAaYGHFGr~~-~~pWEk~dkv~~lk~~~~ 387 (388)
T COG0192 324 KVSEEKIEEAVRKVFDLRPAGIIKMLDLLRPIYRKTAAYGHFGRED-DFPWEKLDKVDELKKAAK 387 (388)
T ss_pred ccCHHHHHHHHHHhcCCCHHHHHHHhccCCccchhcccccccCCCC-CCCccchhhHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999997 899999999999998753
No 2
>TIGR01034 metK S-adenosylmethionine synthetase. Tandem isozymes of this S-adenosylmethionine synthetase in E. coli are designated MetK and MetX.
Probab=100.00 E-value=1.4e-152 Score=1244.80 Aligned_cols=376 Identities=64% Similarity=1.060 Sum_probs=366.2
Q ss_pred EeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCCCC
Q psy15208 184 VVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNIDYG 263 (1027)
Q Consensus 184 L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~~g 263 (1027)
+|++|++++|||||+||+|+|+++|++|++||++|+||||++++++|+|+|||||++++|+++|||++|++|||+++++|
T Consensus 1 lfTSESV~eGHPDKicDqISDaILD~~L~~Dp~srVA~Et~v~~~~V~i~GEitt~~~vd~~~ivR~~i~~IGY~~~~~g 80 (377)
T TIGR01034 1 LFTSESVSEGHPDKIADQISDAVLDAILKQDPKAKVACETFVKTGLVLIGGEITTSAYVDIQEVARNTIKDIGYTDSDYG 80 (377)
T ss_pred CCccCcCCCCCCcHHHHHHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEcCCccCCHHHHHHHHHHHhCCCCcccC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCC
Q psy15208 264 IDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLR 343 (1027)
Q Consensus 264 ~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~~~ 343 (1027)
||+++|.+++.|++|||||+|||+++.. +++|||||||||||||||||+||||||+|||+|++||+++||+|.+||||
T Consensus 81 fd~~t~~v~~~i~~QSpDIa~gV~~~~~--~~iGAGDQGimfGYA~~ET~e~MPl~i~lAh~l~~~l~~~Rk~g~~~~l~ 158 (377)
T TIGR01034 81 FDAKTCAVLVAIGNQSPDIAQGVDKANP--EEQGAGDQGIMFGYATNETPELMPLPITLAHKLLKRAAELRKSGTLPWLR 158 (377)
T ss_pred CCCCceEEEecCCCCChHHHhccccCcc--ccCCCCcceeeeeeecCCCcccCChHHHHHHHHHHHHHHHHhcCCCCeec
Confidence 9999999999999999999999985421 35899999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEEEecCCceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCCCCcccc
Q psy15208 344 PDAKSQVTLRYDNGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCGL 422 (1027)
Q Consensus 344 pd~k~qv~~~y~~~~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp~~d~gl 422 (1027)
|||||||||+|++++|+||+|||||+||++++++++++++|+++||+|++|++++ ++|+||||||||||+|||.|||||
T Consensus 159 PD~KtQVtveY~~~~P~rv~tivvS~QH~~~v~~~~l~~~i~~~vi~~v~~~~~~~~~t~~~INPtGrFviGGP~gDtGL 238 (377)
T TIGR01034 159 PDGKSQVTVQYEDNKPVRVDTIVLSTQHDPDISQKDLREAIIEEIIKPVLPAEYLDEKTKFFINPTGRFVIGGPMGDTGL 238 (377)
T ss_pred CCCceEEEEEEECCceeEEEEEEEecCCCCCCCHHHHHHHHHHHHhHHhcCcccCCCCcEEEECCCCCeEeCCCcccccc
Confidence 9999999999999999999999999999999999999999999999999998887 579999999999999999999999
Q ss_pred CCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeecCCCCCC
Q psy15208 423 TGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSFGSGKIS 502 (1027)
Q Consensus 423 tgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~~t~~~~ 502 (1027)
|||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++||||+||||||++++
T Consensus 239 TGRKIiVDTYGG~~~hGGGAFSGKDptKVDRSaAY~AR~iAKniVaAgla~~c~VQlsYaIGva~Pvsi~V~tfGT~~~~ 318 (377)
T TIGR01034 239 TGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYIAKNIVAAGLADRCEVQLSYAIGVAEPVSIMIETFGTSKKS 318 (377)
T ss_pred ccceEEEeccCcccccCCccccCCCcchhhhHHHHHHHHHHHHHHhhcCcceeEEEEEEEcCcCCCceEEEEcCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccC
Q psy15208 503 DEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSA 563 (1027)
Q Consensus 503 ~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~ 563 (1027)
+++|.++|+++|||||++||++|+|++|||++||+||||||+ +||||++||++.||+++
T Consensus 319 ~~~i~~~v~~~FdlrP~~Ii~~L~L~~piY~~ta~yGHFGr~--~~~WE~~d~~~~l~~~~ 377 (377)
T TIGR01034 319 EEELLNVVKENFDLRPGGIIEKLDLLKPIYRKTAVYGHFGRE--EFPWEKPDKLEELKRAL 377 (377)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHhCCCCchhhhhcccCCCCCC--CCCccccchHHHHHhhC
Confidence 999999999999999999999999999999999999999997 69999999999998653
No 3
>PRK05250 S-adenosylmethionine synthetase; Validated
Probab=100.00 E-value=1.9e-152 Score=1248.88 Aligned_cols=379 Identities=65% Similarity=1.067 Sum_probs=370.2
Q ss_pred eEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCCC
Q psy15208 183 VVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNIDY 262 (1027)
Q Consensus 183 ~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~~ 262 (1027)
++|++|++++|||||+||+|+|+++|++|++||++|+||||++++++|+|+|||+|++++|++++||++|++|||++.++
T Consensus 3 ~lfTSESV~eGHPDKicDqISDaILD~~L~~Dp~srVA~Et~v~~~~V~i~GEitt~a~vD~~~ivR~~i~~IGY~~~~~ 82 (384)
T PRK05250 3 YLFTSESVSEGHPDKIADQISDAILDAILAQDPNARVACETLVTTGLVVVAGEITTSAYVDIEEIVRETIKEIGYTSSEY 82 (384)
T ss_pred ceEeecCCCCCCCcHHHHHHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEeCCccCCHHHHHHHHHHHcCCCCccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCC
Q psy15208 263 GIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWL 342 (1027)
Q Consensus 263 g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~~ 342 (1027)
|||+++|.|++.|++|||||+|||++.+. +++|||||||||||||||||+|||||++|||+|+++|+++||+|.+|||
T Consensus 83 gfd~~~~~v~~~i~~QSpdIa~gV~~~~~--~~~GAGDQGimfGYA~~ET~~~MPl~i~lAh~l~~~l~~~Rk~~~~~~l 160 (384)
T PRK05250 83 GFDANTCAVLVSIGEQSPDIAQGVDRDEL--DEIGAGDQGIMFGYACNETPELMPLPITLAHRLVRRLAEVRKSGTLPYL 160 (384)
T ss_pred CcCCCceEEEeecCCCChhHHhhhCcccc--ccCCCCCceeeeeeecCCCcccCChHHHHHHHHHHHHHHHHhcCCCCee
Confidence 99999999999999999999999986432 3689999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEecCCceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCCCCccc
Q psy15208 343 RPDAKSQVTLRYDNGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCG 421 (1027)
Q Consensus 343 ~pd~k~qv~~~y~~~~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp~~d~g 421 (1027)
||||||||||+|++++|+||++||||+||+++++++++|++|+|+||+|++|++|+ ++|+|+||||||||||||.||||
T Consensus 161 ~PD~KtQVtv~Y~~~~p~~i~tiviS~QH~~~~~~~~l~~~i~e~vi~~v~~~~~~~~~t~~~INPtG~FviGGP~gDtG 240 (384)
T PRK05250 161 RPDAKSQVTVEYENGKPVRIDTIVVSTQHDPDVSQEQLREDVIEEVIKPVLPAELLDEDTKFLINPTGRFVIGGPQGDAG 240 (384)
T ss_pred cCCCceEEEEEEECCceeeEEEEEEeccCCCCCCHHHHHHHHHHHHhHHhcccccCCCCeEEEECCCCCeEeCCCccccc
Confidence 99999999999999999999999999999999999999999999999999998888 57999999999999999999999
Q ss_pred cCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeecCCCCC
Q psy15208 422 LTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSFGSGKI 501 (1027)
Q Consensus 422 ltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~~t~~~ 501 (1027)
||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++||||+||||||+++
T Consensus 241 LTGRKIiVDTYGG~a~hGGGAFSGKDptKVDRSaAY~AR~iAKniVaaglA~~ceVQlsYAIGva~Pvsi~VdtfGt~~~ 320 (384)
T PRK05250 241 LTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADRCEVQLSYAIGVAEPVSIYVDTFGTGKV 320 (384)
T ss_pred ccCceEEEEcCCcccccCCccccCCCcchhhhHHHHHHHHHHHHHHhhcCCCceEEEEEEeeccccCceEEEecCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccC
Q psy15208 502 SDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSA 563 (1027)
Q Consensus 502 ~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~ 563 (1027)
++++|+++|+++|||||++||++|+|++|||++||+||||||++++||||++||++.|++..
T Consensus 321 ~~~~i~~~v~~~Fdl~P~~Ii~~L~L~~piY~~ta~yGHFGr~~~~fpWE~~d~v~~l~~~~ 382 (384)
T PRK05250 321 SDEKIEEAVREVFDLRPAGIIKMLDLRRPIYRKTAAYGHFGREDLDFPWEKTDKVEALKAAA 382 (384)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHhCCCCccchhhcccCCCCCCCCCCCCcccchHHHHHHHh
Confidence 99999999999999999999999999999999999999999998889999999999998654
No 4
>PRK12459 S-adenosylmethionine synthetase; Provisional
Probab=100.00 E-value=1.2e-151 Score=1243.25 Aligned_cols=377 Identities=58% Similarity=0.974 Sum_probs=365.4
Q ss_pred eEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCCC
Q psy15208 183 VVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNIDY 262 (1027)
Q Consensus 183 ~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~~ 262 (1027)
++|++|++++|||||+||+|+|+|+|++|++||.+|+||||++++++|+|+|||+|++++|+++|||++|++|||+ ++
T Consensus 4 ~lfTSESV~eGHPDKicDqISDaILDa~L~qDp~srVA~Et~v~~~~V~v~GEitt~a~vdi~~ivR~~i~~IGY~--~~ 81 (386)
T PRK12459 4 FLFTSESVTEGHPDKLCDQISDAILDACLRQDPASRVACEVLVSTGIVIVAGEITSSAKVDIEKIVRNVIKEIGYD--EL 81 (386)
T ss_pred eeEEecCCCCCCccHHHhhHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEccCccCCHHHHHHHHHHHhCCC--CC
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred CccccceEEEEeeccCChhhhhccccCCC---CCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC
Q psy15208 263 GIDYKSCAVLLIYNKQSLDIAQGVNEGEG---LNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNL 339 (1027)
Q Consensus 263 g~~~~~~~~~~~i~~qs~~i~~~v~~~~~---~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~ 339 (1027)
|||+++|.|++.|++|||||+|||+...+ ..+++|||||||||||||||||+||||||+|||+|+++|+++||+|.+
T Consensus 82 gfd~~t~~v~~~i~~QSpdIa~gV~~~~~~~~~~~~iGAGDQGimfGYA~~ET~~~MPlpi~lAh~l~~~l~~~Rk~g~~ 161 (386)
T PRK12459 82 GFDPRTCTVLVSLGEQSPDIAQGVDTAEGRDEELEELGAGDQGTMFGYACDETPELMPLPIVLAHRLAKRLDQARKDGLL 161 (386)
T ss_pred CCCCCceEEEeccccCChhHhcccccccccccccccCCCCcceEeeeeecCCCcccCChHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999974321 113589999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeEEEEecCCceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCCCC
Q psy15208 340 PWLRPDAKSQVTLRYDNGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKG 418 (1027)
Q Consensus 340 ~~~~pd~k~qv~~~y~~~~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp~~ 418 (1027)
|||||||||||||+|++++|+||+|||||+||++++++++++++|+++||+|++|++++ ++|+||||||||||||||+|
T Consensus 162 ~~l~PD~KsQVtv~Y~~~~P~rv~tivvS~QH~~~v~~~~~~~~i~e~vi~~v~~~~~~~~~t~~~INPtGrFviGGP~g 241 (386)
T PRK12459 162 PGLLPDGKTQVTVEYEDGRPVRVDTIVVSAQHDESVDLETLRRDVIENVIKPVFEDFWLDDETRILINPTGRFVVGGPAA 241 (386)
T ss_pred CeecCCCceEEEEEeeCCceeEEEEEEEeeccCCCCCHHHHHHHHHHHHHHHhcCcccCCCCcEEEECCCCCeEeCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999887 57999999999999999999
Q ss_pred ccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeecCC
Q psy15208 419 DCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSFGS 498 (1027)
Q Consensus 419 d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~~t 498 (1027)
|||||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++||||+||||||
T Consensus 242 D~GLTGRKIiVDTYGG~~~HGGGAFSGKDptKVDRSaAY~AR~iAKniVaAGlA~~ceVQlsYAIGva~Pvsi~V~TfGT 321 (386)
T PRK12459 242 DTGLTGRKIMVDTYGGYARHGGGAFSGKDPSKVDRSAAYAARYIAKNIVAAGLAKRCEVQLSYAIGKARPVSVQVNTFGT 321 (386)
T ss_pred cccccCceEEEEcCCcccccCCccccCCCcchhhhHHHHHHHHHHHHHHhhcCccceEEEEEEeecccccceEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccC
Q psy15208 499 GKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSA 563 (1027)
Q Consensus 499 ~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~ 563 (1027)
+++++++|+++|+++|||||++||++|+|++|||++||+||||||+ +||||++||++.|+++.
T Consensus 322 ~~~~~~~i~~~i~~~Fdl~P~~Ii~~L~L~~piY~~ta~yGHFGr~--~f~WE~~d~~~~l~~~~ 384 (386)
T PRK12459 322 GTVSDEELTRAVREHFDLRPAGIIEKLNLRNPIYRKTAAYGHFGRT--LFPWEKTDKAALLRAAV 384 (386)
T ss_pred CCCCHHHHHHHHHHHcCCCHHHHHHHcCCCCchhhhhcccCCCCCC--CCCcccccHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999997 59999999999998654
No 5
>PLN02243 S-adenosylmethionine synthase
Probab=100.00 E-value=1.1e-150 Score=1232.90 Aligned_cols=374 Identities=52% Similarity=0.896 Sum_probs=362.3
Q ss_pred eEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCCC
Q psy15208 183 VVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNIDY 262 (1027)
Q Consensus 183 ~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~~ 262 (1027)
++|++|++++|||||+||+|+|+++|++|++||++|+||||++++++|+|+|||+|++++|+++|||++|++|||+++++
T Consensus 4 ~lfTSESV~eGHPDKicDqISDaILDa~L~qDp~srVA~Et~v~~~~V~i~GEitt~a~vd~~~ivR~~i~~IGY~~~~~ 83 (386)
T PLN02243 4 FLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCREIGFVSDDV 83 (386)
T ss_pred eEEEecCCCCCCChHHHHHHHHHHHHHHHhhCCCCcEEEEEEEECCEEEEEEEECCCCcCCHHHHHHHHHHHhCCCCccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEeeccCChhhhhccccCCCC-CcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q psy15208 263 GIDYKSCAVLLIYNKQSLDIAQGVNEGEGL-NFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPW 341 (1027)
Q Consensus 263 g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~-~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~ 341 (1027)
|||+++|.|++.|++|||||+|||+.+.+. .+++|||||||||||||||||+||||||+|||+|+++|+++||+|.+||
T Consensus 84 gfd~~t~~v~~~i~~QSpdIa~gV~~~~~~~~~~iGAGDQGimfGYA~~ET~e~MPlpi~lAh~l~~~l~~~Rk~~~~~~ 163 (386)
T PLN02243 84 GLDADKCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGARLTEVRKNGTCPW 163 (386)
T ss_pred CcCCCceEEEecCCCCChhHhhccccccccccccCCCCcceEEeeeecCCCcccCChHHHHHHHHHHHHHHHHhcCCCCe
Confidence 999999999999999999999999854211 1358999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEecC--Cc--eeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCC
Q psy15208 342 LRPDAKSQVTLRYDN--GK--PVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGP 416 (1027)
Q Consensus 342 ~~pd~k~qv~~~y~~--~~--~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp 416 (1027)
|||||||||||+|++ ++ |+||++||||+||+++++++++|++|+++||+|++|++++ ++|+|+||||||||+|||
T Consensus 164 l~PD~KsQVtv~Y~~~~~~~~p~rv~tivvS~QH~~~v~~~~l~~~i~e~vi~~v~~~~~~~~~t~~~INPtGrFviGGP 243 (386)
T PLN02243 164 LRPDGKTQVTVEYKNEGGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGP 243 (386)
T ss_pred ecCCCceEEEEEeecCCCCccceeEeEEEEeeccCCCCCHHHHHHHHHHHHhHHhcCcccCCCCcEEEECCCCCeEeCCC
Confidence 999999999999965 67 9999999999999999999999999999999999998877 579999999999999999
Q ss_pred CCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeec
Q psy15208 417 KGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSF 496 (1027)
Q Consensus 417 ~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~ 496 (1027)
.||||||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++||||+||||
T Consensus 244 ~~D~GLTGRKIiVDTYGG~~~hGGGAFSGKDptKVDRSaAY~AR~iAKniVaaglA~rceVQlsYAIGva~Pvsi~V~Tf 323 (386)
T PLN02243 244 HGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVPEPLSVFVDTY 323 (386)
T ss_pred cccccccCceEEEEcCCCccCCCCccccCCCcchhhhHHHHHHHHHHHHHHhhcCCCeeEEEEEEEcccCcCcEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCHHHHHHHhcCCc---chhhcccccccCCCCCCCCCcccchhH
Q psy15208 497 GSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLR---PIYKKTSVYGHFGRKEPEFTWELTDKA 556 (1027)
Q Consensus 497 ~t~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~---~~y~~~a~~ghfg~~~~~~~we~~~~~ 556 (1027)
||+++++++|.++|+++|||||++||++|+|++ |||++||+||||||++++||||++|++
T Consensus 324 GT~~~~d~~i~~~v~~~Fdlrp~~Ii~~L~L~~~~~piY~~ta~yGHFGr~~~~fpWE~~d~~ 386 (386)
T PLN02243 324 GTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEVVKPL 386 (386)
T ss_pred CCCcCCHHHHHHHHHHHcCCCHHHHHHhcCCCCCCCCcchhccccCCCCCCCCCCCccccCCC
Confidence 999999999999999999999999999999999 999999999999999889999999974
No 6
>PTZ00104 S-adenosylmethionine synthase; Provisional
Probab=100.00 E-value=1.1e-150 Score=1237.20 Aligned_cols=376 Identities=58% Similarity=0.979 Sum_probs=364.7
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNID 261 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~ 261 (1027)
.++|++|++++|||||+||+|+|+|+|++|++||.||+||||++++++|+|+|||+|++++|+++|||++|++|||++++
T Consensus 10 ~~lfTSESVseGHPDKicDqISDaILD~~L~qDp~srVA~Et~v~~~~V~v~GEitt~a~vDi~~ivR~~i~~IGY~~~~ 89 (398)
T PTZ00104 10 HFLFTSESVSEGHPDKLCDQISDAVLDACLAQDPLSKVACETCAKTGMVMVFGEITTKAVVDYQKVVRDTVKEIGYDDTE 89 (398)
T ss_pred CEEEEecCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEEEeCCEEEEEEEEcCCccCCHHHHHHHHHHHhCCCCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q psy15208 262 YGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPW 341 (1027)
Q Consensus 262 ~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~ 341 (1027)
+|||+++|.|++.|++|||||+|||+.+.. .+++|||||||||||||||||+||||||+|||+|+++|+++||+|.+||
T Consensus 90 ~gfd~~t~~v~~~i~~QSpDIa~gV~~~~~-~~~iGAGDQGimfGYA~~ET~~~MPlpi~lAh~L~~~l~~~Rk~~~~~~ 168 (398)
T PTZ00104 90 KGLDYKTCNVLVAIEQQSPDIAQGVHVGKK-EEDIGAGDQGIMFGYATDETEELMPLTHELATKLAKRLSELRKNGILPW 168 (398)
T ss_pred cCcCCCceEEEecCCCCChhHhhccccccc-cccCCCCccceeeeeecCCCcccCCcHHHHHHHHHHHHHHHHhcCCCCe
Confidence 999999999999999999999999985422 1358999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEecC--C---ceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecC
Q psy15208 342 LRPDAKSQVTLRYDN--G---KPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGG 415 (1027)
Q Consensus 342 ~~pd~k~qv~~~y~~--~---~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~gg 415 (1027)
|||||||||||+|++ + +|+||++||||+||+++++++++|++|+++||+|++|++++ ++|+|||||||||||||
T Consensus 169 L~PD~KsQVtv~Y~~~~~~~~~P~~i~tivvS~QH~~~v~~~~l~~~i~~~vi~~v~~~~~~~~~t~~~INPtGrFviGG 248 (398)
T PTZ00104 169 LRPDAKTQVTVEYEYDTRGGLTPKRVHTILISTQHDEGVSNEEIREDLMEHVIKPVIPAKLLDEETKYHLNPSGRFVIGG 248 (398)
T ss_pred eccCCceEEEEEeccCCCCCccceeEEEEEEccccCCCCCHHHHHHHHHHHHHHHhcCcccCCCCcEEEECCCCCeEeCC
Confidence 999999999999965 2 99999999999999999999999999999999999998887 57999999999999999
Q ss_pred CCCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEee
Q psy15208 416 PKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTS 495 (1027)
Q Consensus 416 p~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~ 495 (1027)
|.||||||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++||||+|||
T Consensus 249 P~gDtGLTGRKIiVDTYGG~a~HGGGAFSGKDptKVDRSaAY~ARyiAKniVAAGlA~~ceVQlsYAIGva~Pvsi~V~T 328 (398)
T PTZ00104 249 PHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSLVAAGLCKRCLVQVSYAIGVAEPLSIHVNT 328 (398)
T ss_pred CcccccccCceEEEEcCCCccCCCCccccCCCcchhhhHHHHHHHHHHHHHHhhccccceEEEEEEEcccCCCceeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC--ChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhh
Q psy15208 496 FGSGKI--SDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEV 558 (1027)
Q Consensus 496 ~~t~~~--~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~ 558 (1027)
|||+++ ++++|+++|+++|||||++||++|+|++|||++||+||||||++++||||++||++.
T Consensus 329 fGT~~~~~~~~~i~~~v~~~Fdl~P~~II~~L~L~~PiY~~ta~yGHFGr~~~~f~WE~~d~~~~ 393 (398)
T PTZ00104 329 YGTGKKGYDDEDLLEIVQKNFDLRPGDIIKELDLRRPIFQKTASYGHFGRSDPEFTWEVPKDLEH 393 (398)
T ss_pred CCCcccCCCHHHHHHHHHHHcCCCHHHHHHHhCCCChhhhhhhccCccCCCCCCCCccccchhcc
Confidence 999999 999999999999999999999999999999999999999999988899999999874
No 7
>KOG1506|consensus
Probab=100.00 E-value=1.2e-142 Score=1104.56 Aligned_cols=374 Identities=55% Similarity=0.950 Sum_probs=363.2
Q ss_pred CceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCC
Q psy15208 181 IPVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNI 260 (1027)
Q Consensus 181 ~~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~ 260 (1027)
..++|++|++.+||||++||||+++++|++|++||++++||||.+++++|++.|||||+|.+||++++|++++.|||+++
T Consensus 4 ~tFLFTSESVgEGHPDKmCDQISDAiLDAhLkqDP~aKVACETv~KTgMiml~GEITska~vDYqkvVR~tik~IGydds 83 (383)
T KOG1506|consen 4 ETFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVTKTGMIMLCGEITSKAVVDYQKVVRDTIKKIGYDDS 83 (383)
T ss_pred ceeEEeeccccCCCchHHHHHHHHHHHHHHhhcCCCceeeeeeccccceEEEeeeccchhhhhHHHHHHHHHHHhCCccc
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC
Q psy15208 261 DYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLP 340 (1027)
Q Consensus 261 ~~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~ 340 (1027)
..|||++||++++.|++|||||||||+-+++. +++||||||||||||||||||.|||++.|||+|..+|+++|++|++|
T Consensus 84 skGfD~ktcnvLvaieQQSPdIAqgvH~~k~~-edvGAGDQgimfGYATdet~e~mplt~~lahkln~~l~~~rr~g~l~ 162 (383)
T KOG1506|consen 84 SKGFDYKTCNVLVAIEQQSPDIAQGVHVDKDE-EDVGAGDQGIMFGYATDETPECMPLTIVLAHKLNAKLAELRRNGTLP 162 (383)
T ss_pred ccCccccccceeeeecccCchhhhcccccCCH-hHcCCCcceeEeeeecCCCccccchHHHHHHHHHHHHHhhcccCccc
Confidence 99999999999999999999999999976543 47999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEecC--C--ceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecC
Q psy15208 341 WLRPDAKSQVTLRYDN--G--KPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGG 415 (1027)
Q Consensus 341 ~~~pd~k~qv~~~y~~--~--~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~gg 415 (1027)
|||||+|||||++|.+ | .|.||||||||+||+++|+++++|++++|+||++|+|++++ ++|.|||||+|||||||
T Consensus 163 WlRpdsktqVTvey~~~~Ga~vP~rVhtvviS~QH~~~is~~~lr~~l~e~vik~viPa~~lDe~Tiyhl~PsGrFviGG 242 (383)
T KOG1506|consen 163 WLRPDSKTQVTVEYMNDNGAMVPLRVHTVVISTQHSEDITLDDLRAELKEKVIKPVIPAKYLDEKTIYHLNPSGRFVIGG 242 (383)
T ss_pred ccccCCcceEEEEEecCCCceeeeEEEEEEEecccCccccHHHHHHHHHHhhhhhcCcHhhcCccceEEecCCccEEecC
Confidence 9999999999999974 3 49999999999999999999999999999999999999988 57999999999999999
Q ss_pred CCCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEee
Q psy15208 416 PKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTS 495 (1027)
Q Consensus 416 p~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~ 495 (1027)
|+||+|||||||||||||||+.||||||||||||||||||||+|||+||++|+||||+||+||+|||||+++|+||+|+|
T Consensus 243 P~GDAGlTGRKIIvDtYGGwgahGGGAFSGKD~tKVDRSaAYaaRwvAkSlV~aGl~rR~lVQvSYAIGvaePlSv~v~~ 322 (383)
T KOG1506|consen 243 PQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVAAGLCRRCLVQVSYAIGVAEPLSVFVFT 322 (383)
T ss_pred CCcccccccceEEEeccCcccccCCcccCCCCccccchHHHHHHHHHHHHHHHhhhhhheeeEEeeeecCCCceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHh
Q psy15208 496 FGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAE 557 (1027)
Q Consensus 496 ~~t~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~ 557 (1027)
|||+..++++|.++|++||||||+.|++.|+|+||||.+||+|||||+. +||||+..+++
T Consensus 323 ygTs~~s~~ell~iv~~nFDlrPG~ivk~LdLkrpiy~~Ta~yGHFg~~--~f~WE~pk~Lk 382 (383)
T KOG1506|consen 323 YGTSTKSDKELLEIVKKNFDLRPGMIVKNLDLKRPIYLKTAAYGHFGDQ--EFPWEVPKPLK 382 (383)
T ss_pred ccCCCCCHHHHHHHHHhccCCCCceEEeecccccccccccccccccCCC--CCCccccccCC
Confidence 9999999999999999999999999999999999999999999999986 59999987653
No 8
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=100.00 E-value=2.1e-136 Score=1105.75 Aligned_cols=416 Identities=59% Similarity=0.890 Sum_probs=408.7
Q ss_pred cCCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCC
Q psy15208 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYS 641 (1027)
Q Consensus 562 ~~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~s 641 (1027)
..+|+|||||||++|+++|+||++|||+||++|++|..+|||||.||++|||||+|||+|++||+++||||+|+||||||
T Consensus 2 ~~~y~v~Disla~~Gr~~i~wAe~~MP~L~~iR~~f~~~kPlkG~~i~~~lH~t~kTAvLietL~a~GAeV~~a~cNplS 81 (420)
T COG0499 2 GQDYKVKDISLADEGRKEIEWAEREMPVLMAIREEFAEEKPLKGARIAGCLHMTAKTAVLIETLKAGGAEVRWASCNPLS 81 (420)
T ss_pred CccceecchhhhhhhhHHHHHHHhhChHHHHHHHHHhhcCCCCccEEEEEEeehHHHHHHHHHHHhcCceEEEecCCCCc
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhC-CCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCCh
Q psy15208 642 TQDHAAAAIASK-GIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSE 720 (1027)
Q Consensus 642 tqd~~aaal~~~-g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~ 720 (1027)
|||||||||+.. |||||||||||.||||||++++|+| .||+|||||||++.++|
T Consensus 82 TqD~vaaAl~~~~GipVfA~kGe~~eeY~~~~~~vl~~-------~p~iiiDDG~D~~~~vh------------------ 136 (420)
T COG0499 82 TQDDVAAALAAKEGIPVFAWKGETLEEYYEAIDQVLDW-------EPNIIIDDGGDLTKLVH------------------ 136 (420)
T ss_pred ccHHHHHHHhhccCceEEEEcCCCHHHHHHHHHHHhCc-------CCCEEEecCcceeeeee------------------
Confidence 999999999665 9999999999999999999999996 69999999999999999
Q ss_pred hHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHH
Q psy15208 721 EEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGI 800 (1027)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i 800 (1027)
.++|++++.|+|++|||||||+|||+|+++|.|+||+|+||||.+|++|||+|||+||+||++
T Consensus 137 -----------------~~~~~l~~~i~G~tEETTTGV~RL~am~~~G~L~fPai~VNDs~tK~~FDNrYGtgqS~~DgI 199 (420)
T COG0499 137 -----------------LERPELLDAIKGGTEETTTGVHRLRAMEKDGVLKFPAINVNDSVTKSLFDNRYGTGQSLLDGI 199 (420)
T ss_pred -----------------cccHHHHHHhcCCCcccchHHHHHHHHHhcCCcccceEeecchhhhcccccccccchhHHHHH
Confidence 678999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCc
Q psy15208 801 KRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 801 ~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
+|+||++++||+|||+||||||||+|++|+++||+|+|+|+||+|+++|.|+||+|++++++...+|||||||||+++|+
T Consensus 200 ~RaTn~liaGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~TGnkdVi~ 279 (420)
T COG0499 200 LRATNVLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTATGNKDVIR 279 (420)
T ss_pred HhhhceeecCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEccCCcCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhhcc--ceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhH
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFA 958 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~~~--~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~ 958 (1027)
.+||..||+|++++|+||||+|||.+.|.+. ++.++++++++|.++||++++||++||||||+|++|||++|||+||+
T Consensus 280 ~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~llaeGRLvNLa~a~GHPs~VMd~SFa 359 (420)
T COG0499 280 KEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLAEGRLVNLAAATGHPSEVMDMSFA 359 (420)
T ss_pred HHHHHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEecceeeeeccCCCCcHHHhhhhHH
Confidence 9999999999999999999999999999854 88999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCC
Q psy15208 959 NQTLAQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGP 1019 (1027)
Q Consensus 959 ~q~la~~~l~~~~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~ 1019 (1027)
+|+||++||++++++|.++||.||+++|++||++||++||++||+||++|++||++|++||
T Consensus 360 nQaLa~~~L~~n~~~~~~~Vy~lP~~lD~~VArl~L~~~G~~i~~Lt~eQ~~Yl~~w~~Gt 420 (420)
T COG0499 360 NQALAQIYLVKNHGKLEPGVYRLPKELDEEVARLKLEAMGIELDELTEEQAEYLGSWEEGT 420 (420)
T ss_pred HHHHHHHHHHhcccccCCceeeCcHHHHHHHHHHHHHHhCceeeecCHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999997
No 9
>KOG1370|consensus
Probab=100.00 E-value=4e-134 Score=1060.63 Aligned_cols=427 Identities=65% Similarity=1.032 Sum_probs=420.0
Q ss_pred cCCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCC
Q psy15208 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYS 641 (1027)
Q Consensus 562 ~~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~s 641 (1027)
..+|+|+||+||+|||++|++||+|||+||++|++|+.+|||||+||++|+|||+|||||+|||.++||||+|+|||+||
T Consensus 5 ~~~ykv~~i~~aafGRkeieiAE~eMPglma~r~r~~~skPlkgArI~GClH~tvqTAVLiETLv~LGAev~WssCNIfS 84 (434)
T KOG1370|consen 5 SSNYKVKDISQAAFGRKEIEIAENEMPGLMALRKRYGPSKPLKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFS 84 (434)
T ss_pred CCCceeeechhhhhchhhhhhhhhhcchHHHHHHHhccCCCCCCCeeeeeeeeehhHHHHHHHHHHhCceeeeeecceec
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChh
Q psy15208 642 TQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEE 721 (1027)
Q Consensus 642 tqd~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1027)
||||+||||++.|+|||||||||.||||||++|++. .++ ++||||||||||+++++|
T Consensus 85 TQdhaAAAiA~~g~Pvfawkget~ee~~wcie~~~~-~~g---~~~nmIlDdggd~t~l~h------------------- 141 (434)
T KOG1370|consen 85 TQDHAAAAIAEAGVPVFAWKGETEEEYWWCIERCLN-KDG---WQPNMILDDGGDLTHLVH------------------- 141 (434)
T ss_pred chhHHHHHHHhcCCceeeeccccchhhhhhhhhhhc-cCC---CCcceeecCCCchhhhhh-------------------
Confidence 999999999999999999999999999999999998 455 689999999999999999
Q ss_pred HHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHh
Q psy15208 722 EVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801 (1027)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~ 801 (1027)
++||++++.+.|++||||||||||++|.++|.|.+|+||||||.+|++|||.|||++|+.|+++
T Consensus 142 ----------------~kyp~~~~~i~GiseEttTGVH~Lykm~k~G~L~VPAiNVNDSVTKsKFDnLygcreSl~Dgik 205 (434)
T KOG1370|consen 142 ----------------EKYPQMFKKIRGISEETTTGVHNLYKMSKNGKLKVPAINVNDSVTKSKFDNLYGCRESLLDGIK 205 (434)
T ss_pred ----------------hhhHHHHhhhcccchhhhhhHHHHHHHHhCCceecceeeccchhhhhhccccccchhhhhhhhh
Confidence 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcH
Q psy15208 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITH 881 (1027)
Q Consensus 802 r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~ 881 (1027)
|+|+++++||.+||.|||.+|++||+.||++|++|+|+|+||++++||.|+||+|.+++|++.++||||++||++++|..
T Consensus 206 raTDvM~aGKv~Vv~GYGdVGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc~dii~~ 285 (434)
T KOG1370|consen 206 RATDVMIAGKVAVVCGYGDVGKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGCKDIITG 285 (434)
T ss_pred hhhhheecccEEEEeccCccchhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCCcchhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhhc--cceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHh
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLKK--YKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFAN 959 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~~--~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~ 959 (1027)
+||++||++++++|+||||.|||+.+|.. .++..+++++++|.+|+|+.|.|||+||||||+|++|||++||+.||++
T Consensus 286 ~H~~~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL~CatghpSFvmS~sftn 365 (434)
T KOG1370|consen 286 EHFDQMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNLGCATGHPSFVMSNSFTN 365 (434)
T ss_pred HHHHhCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeecccccCCCceEEecchHH
Confidence 99999999999999999999999999984 4888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcC-CCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 960 QTLAQIELFNNT-SNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 960 q~la~~~l~~~~-~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
|+||+++||+++ ++|+.|||.||+.+||+||++||.+||++|++||++|++||+.+..||||||||||
T Consensus 366 QvlAqIeLwt~p~~kY~~~V~~LPKklDE~VA~lHL~kl~~kLTkLt~~Qa~YlG~~~~gPfKpdhYRY 434 (434)
T KOG1370|consen 366 QVLAQIELWTAPEGKYKVGVYVLPKKLDEYVASLHLGKLGAKLTKLTDKQAKYLGLSKDGPFKPDHYRY 434 (434)
T ss_pred HHHHHHHHhcCCCCccccceEecchhhHHHHHHhhhhhhchhhhhhhHHHHHhcCCCcCCCCCCCCCCC
Confidence 999999999998 79999999999999999999999999999999999999999999999999999999
No 10
>PLN02494 adenosylhomocysteinase
Probab=100.00 E-value=3.6e-129 Score=1112.15 Aligned_cols=462 Identities=59% Similarity=0.936 Sum_probs=445.7
Q ss_pred CCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCC
Q psy15208 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYST 642 (1027)
Q Consensus 563 ~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~st 642 (1027)
-+|+||||+||++|+++|+||++|||+|+++|++|+++|||+|+||++|||||+|||+|++||+++||||+|||||||||
T Consensus 4 ~~~~v~d~~la~~G~~~i~wa~~~mp~l~~~~~~~~~~~pl~G~~i~~~lHl~~kTa~L~~tL~~~GA~v~~~~~Np~sT 83 (477)
T PLN02494 4 REYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST 83 (477)
T ss_pred cceeecchhhhHHHHHHHHHHHHhCHHHHHHHHHhhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEcCCCccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccc---cccCCCCC-
Q psy15208 643 QDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENN---ISILSNPC- 718 (1027)
Q Consensus 643 qd~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~---~~~~~~~~- 718 (1027)
||||||||++.||+||||||||.||||||++++|+|.++ .+|+|||||||||+.++|.+.++|.. ++.++.|.
T Consensus 84 qd~vaaal~~~gi~vfa~~g~~~~ey~~~~~~~l~~~~~---~~p~~i~DDG~dl~~~~h~~~~~e~~~~~~~~~~~~~~ 160 (477)
T PLN02494 84 QDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPG---GGPDLIVDDGGDATLLIHEGVKAEEEFEKDGTLPDPTS 160 (477)
T ss_pred hHHHHHHHHhCCceEEEecCCCHHHHHHHHHHHHcCCCC---CCCCEEEeCCchHHHHHHhchhhhhcccccccCCCCCC
Confidence 999999999999999999999999999999999999876 58999999999999999988777774 35555554
Q ss_pred --ChhHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhH
Q psy15208 719 --SEEEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESL 796 (1027)
Q Consensus 719 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~ 796 (1027)
+.|+||||++|+++++++|.+||+++++++|++||||||++||++|+++|.|+||||+||||.+|++|||+||||||+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTttGv~Rl~~m~~~g~L~~Pvi~vnds~~K~~fDn~yGtgqS~ 240 (477)
T PLN02494 161 TDNAEFKIVLTIIKDGLKVDPKKYHKMKERLVGVSEETTTGVKRLYQMQKNGTLLFPAINVNDSVTKSKFDNLYGCRHSL 240 (477)
T ss_pred cccHHHHHHHHHHHHHHhhCcchhhHHHHhhcCCcccccHHHHHHHHHHHCCCCCCCEEEEcChhhhhhhhccccccccH
Confidence 559999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCc
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~ 876 (1027)
|++++|.|+..+.||+|+|+|||+||+++|++++++||+|+|+|++|.++.+|.++|+.+.++++++..+|+||++||++
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI~tTGt~ 320 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFVTTTGNK 320 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999998899999999889999999999999999999
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc---cceeccccceeeeecCC-CcEEEEecCCccccccCCCCCCcce
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK---YKWENIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYV 952 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~---~~~~~~~~~v~~y~~~d-g~~i~LLa~GrlvNl~~~~G~P~~v 952 (1027)
++++.++|+.||+||+|+|+|+++.|||.+.|.. .++.+++++++.|.++| |++|+||++||+|||+|++|||++|
T Consensus 321 ~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~i~ll~eGrlvNl~~~~GhP~ev 400 (477)
T PLN02494 321 DIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSGIIVLAEGRLMNLGCATGHPSFV 400 (477)
T ss_pred cchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCEEEEEeCCccccccCCCCCCcce
Confidence 9999999999999999999999999999999985 46778899999999999 9999999999999999999999999
Q ss_pred EehhhHhHHHHHHHHhhc--CCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 953 MSSSFANQTLAQIELFNN--TSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 953 md~sf~~q~la~~~l~~~--~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
||+||++|+||++||+++ .++|+++||.||+++|++||++||++||++||+||+||++||++..+|||||+||||
T Consensus 401 md~sFa~Q~la~~~l~~~~~~~~~~~~v~~lP~~~D~~vA~~~L~~~g~~~~~lt~~Q~~yl~~~~~gp~k~~~y~y 477 (477)
T PLN02494 401 MSCSFTNQVIAQLELWNEKKSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYINVPVEGPYKPAHYRY 477 (477)
T ss_pred eeHHHHHHHHHHHHHHhcccccccCCCcEECCHHHHHHHHHHHHHHcCCccccCCHHHHHhcCCCcCCCCCccccCC
Confidence 999999999999999988 688999999999999999999999999999999999999999999999999999999
No 11
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=100.00 E-value=2.8e-126 Score=1091.95 Aligned_cols=462 Identities=64% Similarity=1.029 Sum_probs=446.4
Q ss_pred CCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCC
Q psy15208 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYST 642 (1027)
Q Consensus 563 ~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~st 642 (1027)
.+|+||||+||++|+++|+||++|||+||++|++|+++|||+|+||++|+|||+|||+|++||+++||||+|||||||||
T Consensus 3 ~~~~v~d~~la~~G~~~i~wa~~~mP~L~~~~~~~~~~~pl~G~ri~~~lh~~~~Ta~l~~tL~~~GA~v~~~~~n~~st 82 (476)
T PTZ00075 3 TDYKVKDISLAEFGRKEIELAENEMPGLMALREEYGPSKPLKGARITGCLHMTVQTAVLIETLKALGAEVRWCSCNIFST 82 (476)
T ss_pred cceeeccchhhhHhHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCCcc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCC-CcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhcccccccc---ccCCCCC
Q psy15208 643 QDHAAAAIASKG-IPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNI---SILSNPC 718 (1027)
Q Consensus 643 qd~~aaal~~~g-~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~---~~~~~~~ 718 (1027)
||||||||++.| |+||||||||+||||||++++|+|+++ .+|+||+||||||+.++|+|.++|... ++++.+.
T Consensus 83 qD~~aaal~~~g~i~vfa~~g~t~eey~~~~~~~l~~~~~---~~p~~i~DdG~dl~~~~~~g~~~e~~~~~~~~~~~~~ 159 (476)
T PTZ00075 83 QDHAAAAIAKAGSVPVFAWKGETLEEYWWCTEQALKWPNG---DGPNLIVDDGGDATLLVHEGVKAEKLYEEKGILPDPL 159 (476)
T ss_pred ccHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHhccCC---CCCCEEEECCcHHHHHHHhhhHhhhccccccccCCCc
Confidence 999999999999 999999999999999999999999876 589999999999999999999999875 4555443
Q ss_pred ---ChhHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhh
Q psy15208 719 ---SEEEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRES 795 (1027)
Q Consensus 719 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s 795 (1027)
++|++|||++|++.++++|++||+++++++|++|||||||+||++|+++|.|.|||+||||+.+|+.|||.||+++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTttGv~rl~~m~~~g~L~iPV~nv~d~~tk~~aD~~~G~~~s 239 (476)
T PTZ00075 160 DPSNEDEKCLLTVLKKLLTKNPDKWTNLVKKIVGVSEETTTGVHRLYKMLKKGELLFPAINVNDSVTKSKFDNIYGCRHS 239 (476)
T ss_pred ccccHHHHHHHHHHhhhhhcCchhhhhhhhccEeeeecchHHHHHHHHHHHCCCCCceEEEeCCcchHHHHHHHHHHHHH
Confidence 66999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCC
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~ 875 (1027)
++++++|.++..+.||+|+|+|||+||+++|++|+++||+|+++|++|.++.+|.++|+++.+++++++.+|+||+|||+
T Consensus 240 ~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt 319 (476)
T PTZ00075 240 LIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGN 319 (476)
T ss_pred HHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCc
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc---cceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcce
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK---YKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYV 952 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~---~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~v 952 (1027)
+++|+.++|+.||+|++|+|+|+++.|++++.|.. ....++.+.+..|++|||++|+||++||+|||+|++|||++|
T Consensus 320 ~~iI~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~~~~GhP~~v 399 (476)
T PTZ00075 320 KDIITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLGCATGHPSFV 399 (476)
T ss_pred ccccCHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccCCCCCCCeeE
Confidence 99999999999999999999999999999888775 457889999999999999999999999999999999999999
Q ss_pred EehhhHhHHHHHHHHhhcCC--CCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 953 MSSSFANQTLAQIELFNNTS--NYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 953 md~sf~~q~la~~~l~~~~~--~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
||+||++|+||++||+++++ +|+++||.||+++|++||++||++||++||+||+||++||+...+||||||||||
T Consensus 400 Md~sfa~Q~la~~~l~~~~~~~~~~~~v~~lp~~~d~~vA~~~L~~~g~~~~~lt~~q~~yl~~~~~gp~k~~~y~y 476 (476)
T PTZ00075 400 MSNSFTNQVLAQIELWENRDTGKYPNGVYKLPKELDEKVARLHLKKLGAKLTKLTDKQAEYIGVPVDGPYKSDHYRY 476 (476)
T ss_pred eeHHHHHHHHHHHHHHhccCccccCCceEECCHHHHHHHHHHHHHHcCCccccCCHHHHHhcCCCCCCCCCccccCC
Confidence 99999999999999999987 8999999999999999999999999999999999999999999999999999999
No 12
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=100.00 E-value=1e-112 Score=978.42 Aligned_cols=418 Identities=67% Similarity=1.024 Sum_probs=409.0
Q ss_pred cCCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCC
Q psy15208 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYS 641 (1027)
Q Consensus 562 ~~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~s 641 (1027)
..+|+||||+||++|+++|+||++|||+|+++|++|+++|||+|+||++|+|||+|||+|++||+++||||+||+|||||
T Consensus 5 ~~~~~~~d~~l~~~g~~~i~w~~~~mp~l~~~~~~~~~~~pl~G~~i~~~~Hl~~~Ta~l~~~L~~~GA~v~~~~~np~S 84 (425)
T PRK05476 5 GTDYKVADISLADWGRKEIEWAETEMPGLMAIREEFAAEKPLKGARIAGCLHMTIQTAVLIETLKALGAEVRWASCNPFS 84 (425)
T ss_pred CCceeecchhhhhhhhHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEeccccHHHHHHHHHHcCCEEEEEeCCCcc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHh-cCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCCh
Q psy15208 642 TQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIF-DWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSE 720 (1027)
Q Consensus 642 tqd~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l-~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~ 720 (1027)
|||||||||++.||+||||+|+|.||||||++++| + ++|++||||||||+.++|
T Consensus 85 tqd~vaaaL~~~gi~v~a~~~~~~~ey~~~~~~~l~~-------~~p~iiiDdGgdl~~~~~------------------ 139 (425)
T PRK05476 85 TQDDVAAALAAAGIPVFAWKGETLEEYWECIERALDG-------HGPNMILDDGGDLTLLVH------------------ 139 (425)
T ss_pred cCHHHHHHHHHCCceEEecCCCCHHHHHHHHHHHhcC-------CCCCEEEecccHHHHHHH------------------
Confidence 99999999999999999999999999999999999 6 589999999999999999
Q ss_pred hHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHH
Q psy15208 721 EEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGI 800 (1027)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i 800 (1027)
++||+++++++|++||||||++||++|+++|.|+|||||||||.+|++|||+|||++|+|+++
T Consensus 140 -----------------~~~~~~~~~i~G~~EeTttGv~rl~~~~~~~~l~~Pv~~vn~s~~K~~~dn~~gt~~s~~~ai 202 (425)
T PRK05476 140 -----------------TERPELLANIKGVTEETTTGVHRLYAMAKDGALKFPAINVNDSVTKSKFDNRYGTGESLLDGI 202 (425)
T ss_pred -----------------HHhhHhHhccEeeeecchHHHHHHHHHHHcCCCCCCEEecCCcccCccccccHHHHhhhHHHH
Confidence 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCc
Q psy15208 801 KRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 801 ~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
++.+++.++|++|+|+|||+||+++|++|+++|++|+|+|++|.++.+|.++|+++.++++++..+|+||++||++++++
T Consensus 203 ~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDVVI~aTG~~~vI~ 282 (425)
T PRK05476 203 KRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDIFVTATGNKDVIT 282 (425)
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCEEEECCCCHHHHH
Confidence 99999889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhhcc--ceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhH
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFA 958 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~~~--~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~ 958 (1027)
.++|+.||+|++++|+||++.|+|++.|... +.+++++++.+|++|||+.++||++||+|||+|++|||.+|||+||+
T Consensus 283 ~~~~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl~~~~ghp~~vmd~sfa 362 (425)
T PRK05476 283 AEHMEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNLGAATGHPSEVMDMSFA 362 (425)
T ss_pred HHHHhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCcccccCCCCCCcceeeCHHHH
Confidence 9999999999999999999999999999865 78899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCC
Q psy15208 959 NQTLAQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYK 1021 (1027)
Q Consensus 959 ~q~la~~~l~~~~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~ 1021 (1027)
+|+||+.+|+++++++++|||.||+++|++||++||++||++||+||+||++||++|..||||
T Consensus 363 ~q~l~~~~l~~~~~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~~ 425 (425)
T PRK05476 363 NQALAQIELFTNRGKLEPGVYVLPKELDEEVARLKLKALGVKLDELTEEQAEYIGVWVEGPFK 425 (425)
T ss_pred HHHHHHHHHHhccCcCCCCeEECCHHHHHHHHHHHHHHcCCccccCCHHHHHHcCCCcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998
No 13
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=100.00 E-value=4e-111 Score=960.34 Aligned_cols=404 Identities=55% Similarity=0.829 Sum_probs=394.9
Q ss_pred hhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCCHHHHHHHHHhC
Q psy15208 574 QWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASK 653 (1027)
Q Consensus 574 ~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~stqd~~aaal~~~ 653 (1027)
++|+++|+||++|||+|+++|++|+++|||+|+||++|+|||+|||+|++||+++||||+||+||||||||||||||++.
T Consensus 1 ~~g~~~i~w~~~~mp~l~~~~~~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~ 80 (406)
T TIGR00936 1 AEGRKKIEWAEREMPVLMRIRERFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKA 80 (406)
T ss_pred CccHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChhHHHHHHHHHhHh
Q psy15208 654 GIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKL 733 (1027)
Q Consensus 654 g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1027)
||+||||+|+|+||||||++++|+ ++|++||||||||+.++|
T Consensus 81 gi~v~a~~~~~~~ey~~~~~~~l~-------~~p~~iiDdGgdl~~~~~------------------------------- 122 (406)
T TIGR00936 81 GIPVFAWRGETNEEYYWAIEQVLD-------HEPNIIIDDGADLIFLLH------------------------------- 122 (406)
T ss_pred CceEEEecCCCHHHHHHHHHHHhc-------CCCCEEEecccHHHHHHH-------------------------------
Confidence 999999999999999999999998 489999999999999999
Q ss_pred hhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHhhhcCccccCCEE
Q psy15208 734 KIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKIA 813 (1027)
Q Consensus 734 ~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r~t~~~l~Gk~V 813 (1027)
++||++.++++|++||||||++||++|+++|.|+||||+||||.+|++|||+|||++|+|++++|.+++.++|++|
T Consensus 123 ----~~~~~~~~~~~G~~EeTttGv~rl~~~~~~~~L~~Pvi~vnds~~K~~fDn~yg~g~s~~~~i~r~t~~~l~Gk~V 198 (406)
T TIGR00936 123 ----TERPELLEKIIGGSEETTTGVIRLRAMEAEGVLKFPAINVNDAYTKSLFDNRYGTGQSTIDGILRATNLLIAGKTV 198 (406)
T ss_pred ----HhhhhhhhccEEEeecchHHHHHHHHHHHcCCCCCcEEEecchhhchhhhcccccchhHHHHHHHhcCCCCCcCEE
Confidence 7899999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEE
Q psy15208 814 VIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIV 893 (1027)
Q Consensus 814 vViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gail 893 (1027)
+|+|||+||+++|++++++|++|+|+|+||.++.+|.++|+.+.++++++..+|+||++||++++++.++|+.||+|+++
T Consensus 199 vViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~Gail 278 (406)
T TIGR00936 199 VVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDGAIV 278 (406)
T ss_pred EEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCcccchhhhhcc--ceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHhHHHHHHHHhhcC
Q psy15208 894 CNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNT 971 (1027)
Q Consensus 894 vNvG~~d~eid~~~l~~~--~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~la~~~l~~~~ 971 (1027)
+|+|+++.|||.+.|... +..++++++++|.+|||+.|+||++||+|||+|++|||.+|||+||++|+||+.||++++
T Consensus 279 iN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~ll~~GrlvNl~~~~ghp~~vmd~sfa~q~la~~~l~~~~ 358 (406)
T TIGR00936 279 ANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIYLLAEGRLVNLAAAEGHPSEVMDMSFANQALAAEYLWKNH 358 (406)
T ss_pred EEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEEEEeCCceecccCCCCCcceeeCHHHHHHHHHHHHHHhcc
Confidence 999999999999999754 677899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCC
Q psy15208 972 SNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGP 1019 (1027)
Q Consensus 972 ~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~ 1019 (1027)
+++++|||.||+++|++||++||++||++||+||+||++||++|+.||
T Consensus 359 ~~~~~~v~~lp~~~d~~va~~~l~~~g~~~~~lt~~q~~y~~~~~~g~ 406 (406)
T TIGR00936 359 DKLEPGVYRLPKELDEMVARLKLEAMGIEIDELTEEQKEYLGSWEEGT 406 (406)
T ss_pred cccCCCeEECCHHHHHHHHHHHHHHcCceeccCCHHHHHHhcCCcCCC
Confidence 999999999999999999999999999999999999999999999997
No 14
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=100.00 E-value=3.1e-106 Score=923.20 Aligned_cols=411 Identities=69% Similarity=1.062 Sum_probs=396.7
Q ss_pred CCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCCHHHHHHH
Q psy15208 570 INLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYSTQDHAAAA 649 (1027)
Q Consensus 570 ~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~stqd~~aaa 649 (1027)
+|||++|+++|+||++|||+|+++|++|+++|||+|+||++|+|||+|||+|++||+++||||+||+|||||||||||||
T Consensus 1 ~~l~~~g~~~i~w~~~~mp~l~~~~~~~~~~~p~~g~~i~~~~hl~~~ta~l~~~L~~~GA~v~~~~~np~stqd~vaa~ 80 (413)
T cd00401 1 ISLAAFGRKEIEIAENEMPGLMAIREEYGASKPLKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAA 80 (413)
T ss_pred CCchhhhhHHHHHHHHHCHHHHHHHHHhhccCCCCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChhHHHHHHHH
Q psy15208 650 IASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSI 729 (1027)
Q Consensus 650 l~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1027)
|++.||+||||||+|.||||||++++|+|+++ +|++|+||||||+.++|
T Consensus 81 l~~~gi~v~a~~~~~~~~y~~~~~~~l~~~~~----~p~~i~DdGg~~~~~~~--------------------------- 129 (413)
T cd00401 81 IAAAGIPVFAWKGETLEEYWWCIEQALKFPDG----EPNMILDDGGDLTLLIH--------------------------- 129 (413)
T ss_pred HHhcCceEEEEcCCCHHHHHHHHHHHHhccCC----CCcEEEecchHHHHHHH---------------------------
Confidence 99999999999999999999999999999664 79999999999999999
Q ss_pred HhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHhhhcCcccc
Q psy15208 730 KNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIA 809 (1027)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r~t~~~l~ 809 (1027)
.++|++.++++|++||||||++||++|+++|.|+||||+||||.+|++|||+|||+||+|++++|.++..+.
T Consensus 130 --------~~~~~~~~~~~G~~EeTttGv~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~g~s~~~~i~r~t~~~l~ 201 (413)
T cd00401 130 --------KKHPELLPGIRGISEETTTGVHRLYKMEKEGKLKFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIA 201 (413)
T ss_pred --------hhhhhhhhccEEEeecchHHHHHHHHHHHCCCCCCCEEEecchhhcccccccchhchhhHHHHHHhcCCCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCC
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKD 889 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~ 889 (1027)
|++|+|+|||+||+++|+.++++||+|+|+|++|.|+.+|.++|++++++++++..+|+||+|||++++++.++++.||+
T Consensus 202 GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~ 281 (413)
T cd00401 202 GKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFVTTTGNKDIITGEHFEQMKD 281 (413)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEEECCCCHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999989999999
Q ss_pred CeEEEEecCCCcccchhhhhcc--ceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHhHHHHHHHH
Q psy15208 890 QAIVCNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIEL 967 (1027)
Q Consensus 890 gailvNvG~~d~eid~~~l~~~--~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~la~~~l 967 (1027)
|++++|+|+++.+||.+.+... +....+.++..|.++||+.|+||++|++|||+++.|||++|||++|++|++++.++
T Consensus 282 GgilvnvG~~~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l 361 (413)
T cd00401 282 GAIVCNIGHFDVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIEL 361 (413)
T ss_pred CcEEEEeCCCCCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHH
Confidence 9999999999999999988754 45556677777888989999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCC
Q psy15208 968 FNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGP 1019 (1027)
Q Consensus 968 ~~~~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~ 1019 (1027)
+.+++++.++|+.+|+++|++||++||++||++||+||+||++||++|+.||
T Consensus 362 ~~~~~~~~~kV~~~p~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~ 413 (413)
T cd00401 362 WTNRDKYEVGVYFLPKKLDEEVARLHLGKLGVKLTKLTDKQAEYLGVPVEGP 413 (413)
T ss_pred HhcCCcCCCcEEECCHHHHHHHHHHHHHhcCceeccCCHHHHHHhcCCcCCC
Confidence 9998889999999999999999999999999999999999999999999997
No 15
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=100.00 E-value=1.6e-94 Score=766.69 Aligned_cols=265 Identities=55% Similarity=0.855 Sum_probs=230.5
Q ss_pred CceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCCH
Q psy15208 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYSTQ 643 (1027)
Q Consensus 564 ~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~stq 643 (1027)
+|+||||+||++|+++|+||++|||+||++|++|+++|||+|+||++|||||+|||+|++||+++||||+||||||||||
T Consensus 2 ~y~VkDi~LA~~G~~~i~wa~~~MPvL~~lr~~~~~~kPl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQ 81 (268)
T PF05221_consen 2 DYKVKDISLAESGRKKIEWAERHMPVLMALRERFEAEKPLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQ 81 (268)
T ss_dssp EEBES-GGGHHHHHHHHHHHHHT-HHHHHHHHHHTTT-TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--
T ss_pred CCcccCccHhHHHHHHHHHHHhhCHHHHHHHHHhhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChhHH
Q psy15208 644 DHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEV 723 (1027)
Q Consensus 644 d~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1027)
|||||||++.||+||||||+|.||||||++++|+|.++ .+|++||||||||+.++|
T Consensus 82 DdvaAAL~~~Gi~V~A~~get~eey~~~i~~~L~~~~~---~~P~~iiDDG~Dl~~~lh--------------------- 137 (268)
T PF05221_consen 82 DDVAAALAEEGIPVFAWKGETDEEYWWCIEKALSWEDD---HGPNLIIDDGGDLVNLLH--------------------- 137 (268)
T ss_dssp HHHHHHHHHTTEEEEE-TT--HHHHHHHHHHCHSESTT---CE-SEEEESSSHHHHHHH---------------------
T ss_pred hHHHHHhccCCceEEEeCCCCHHHHHHHHHHHhcCCCC---CCcceeecchHHHHHHHH---------------------
Confidence 99999999999999999999999999999999999876 689999999999999999
Q ss_pred HHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHhhh
Q psy15208 724 CLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803 (1027)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r~ 803 (1027)
++||+++++++|+||||||||+||++|+++|.|+||||+||||.+|++||
T Consensus 138 --------------~~~~~l~~~i~G~sEETTTGv~rL~am~~~g~L~~PviavNDa~tK~~FD---------------- 187 (268)
T PF05221_consen 138 --------------TKRPELLSGIIGGSEETTTGVHRLRAMEKEGKLKFPVIAVNDAVTKHLFD---------------- 187 (268)
T ss_dssp --------------HHHHHHHHT-SEEEE-SHHHHHHHHHHHHTT---SEEEESTTSHHHHTTH----------------
T ss_pred --------------HHHHhhhhheEEecccccccchhhhhhhhhcccCCCeeEecchhhHhhcC----------------
Confidence 78999999999999999999999999999999999999999999999998
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHH
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDH 883 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~ 883 (1027)
T Consensus 188 -------------------------------------------------------------------------------- 187 (268)
T PF05221_consen 188 -------------------------------------------------------------------------------- 187 (268)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCCCCeEEEEecCCCcccchhhhhccceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHhHHHH
Q psy15208 884 MRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLA 963 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~eid~~~l~~~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~la 963 (1027)
||+||||+||++|+||
T Consensus 188 ----------------------------------------------------------------HP~eVMd~SFa~QaLa 203 (268)
T PF05221_consen 188 ----------------------------------------------------------------HPSEVMDMSFANQALA 203 (268)
T ss_dssp ----------------------------------------------------------------S-HHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------CchhhhhhHhHHHHHH
Confidence 9999999999999999
Q ss_pred HHHHhhcC--CCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCC
Q psy15208 964 QIELFNNT--SNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYR 1026 (1027)
Q Consensus 964 ~~~l~~~~--~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~ 1026 (1027)
++||++++ ++|++|||.||+++|++||++||++||++||+||++|++||++|++|||||||||
T Consensus 204 ~~~L~~~~~~~~~~~~V~~lP~~lDe~VA~~kL~~lGi~id~Lt~eQ~~YL~~~~~GP~k~~~yr 268 (268)
T PF05221_consen 204 QIYLWKNPNSGKLEPGVYPLPKELDEEVARLKLKSLGIKIDKLTEEQAEYLGSWQEGPFKPDHYR 268 (268)
T ss_dssp HHHHHHTGTTGGSTSSEEE--HHHHHHHHHHHHGGGT-------HHHHHHHTS-TTS-SS-TT--
T ss_pred HHHHHhCcCccccCCCEEECCccchHHHHHHHHHHcCCccccCCHHHHHHcCCCCCCCCCccccC
Confidence 99999887 8999999999999999999999999999999999999999999999999999998
No 16
>PF02773 S-AdoMet_synt_C: S-adenosylmethionine synthetase, C-terminal domain; InterPro: IPR022630 The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold. This entry represents the C-terminal domain of S=adenosylmethionine synthetase and is found in association with PF00438 from PFAM and PF02772 from PFAM. S-adenosylmethionine synthetase (MAT, 2.5.1.6 from EC) is the enzyme that catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP []. AdoMet is an important methyl donor for transmethylation and is also the propylamino donor in polyamine biosynthesis. In bacteria there is a single isoform of AdoMet synthetase (gene metK), there are two in budding yeast (genes SAM1 and SAM2) and in mammals while in plants there is generally a multigene family. The sequence of AdoMet synthetase is highly conserved throughout isozymes and species. The active sites of both the Escherichia coli and rat liver MAT reside between two subunits, with contributions from side chains of residues from both subunits, resulting in a dimer as the minimal catalytic entity. The side chains that contribute to the ligand binding sites are conserved between the two proteins. In the structures of complexes with the E. coli enzyme, the phosphate groups have the same positions in the (PPi plus Pi) complex and the (ADP plus Pi) complex, and are located at the bottom of a deep cavity with the adenosyl group nearer the entrance []; GO: 0004478 methionine adenosyltransferase activity; PDB: 3IML_B 1QM4_B 1O9T_B 1O93_A 1O92_B 1O90_A 1FUG_A 1RG9_D 1XRA_A 1P7L_C ....
Probab=100.00 E-value=2.1e-77 Score=570.03 Aligned_cols=138 Identities=72% Similarity=1.242 Sum_probs=122.0
Q ss_pred ecCCCCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEE
Q psy15208 413 IGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIM 492 (1027)
Q Consensus 413 ~ggp~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~ 492 (1027)
||||.|||||||||||||||||+++|||||||||||||||||||||||||||||||||||+|||||||||||+++|+||+
T Consensus 1 iGGp~~D~GlTGRKiivDtYGg~~~hGGGafSGKD~tKvDRsaaY~aR~iAKniVaagla~~c~vqlsYaIGv~~P~si~ 80 (138)
T PF02773_consen 1 IGGPQGDTGLTGRKIIVDTYGGWARHGGGAFSGKDPTKVDRSAAYMARYIAKNIVAAGLAKRCEVQLSYAIGVAEPVSIY 80 (138)
T ss_dssp S-TTTTSEEETTSSTTTTTTTTSSB-BS---TTB-TTSHHHHHHHHHHHHHHHHHHTTSBSEEEEEEEE-TT-SS-SEEE
T ss_pred CCCCccccccccceEEEecccCceecCCccccCCChhhhhccHHHHHHHHHHHHHHccchHHHHhhceeeeccccCcccE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCccc
Q psy15208 493 VTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWEL 552 (1027)
Q Consensus 493 v~~~~t~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~ 552 (1027)
||||||+++++++|.++|+++|||||++||++|+|++|||++||+||||||++ |||||
T Consensus 81 v~tfgT~~~~d~~i~~~I~~~Fdl~P~~II~~L~L~~PiY~~TA~yGHFGr~~--~~WE~ 138 (138)
T PF02773_consen 81 VDTFGTGKISDEEILEIIKENFDLRPAGIIKELDLRRPIYRKTAAYGHFGRED--FPWEK 138 (138)
T ss_dssp EEETT-BSS-HHHHHHHHHHHS--SHHHHHHHCTTTSSTHGGGGSS-SSSSTT--SGGG-
T ss_pred EEeCCCccchHHHHHHHHHHHhCCcHHHHHHHhCcCCchhHhhhCcCCCCCCC--CCCCC
Confidence 99999999999999999999999999999999999999999999999999986 99997
No 17
>PF02772 S-AdoMet_synt_M: S-adenosylmethionine synthetase, central domain; InterPro: IPR022629 The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold. This entry represents the central domain and is found in association with PF00438 from PFAM and PF02773 from PFAM. S-adenosylmethionine synthetase (MAT, 2.5.1.6 from EC) is the enzyme that catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP []. AdoMet is an important methyl donor for transmethylation and is also the propylamino donor in polyamine biosynthesis. In bacteria there is a single isoform of AdoMet synthetase (gene metK), there are two in budding yeast (genes SAM1 and SAM2) and in mammals while in plants there is generally a multigene family. The sequence of AdoMet synthetase is highly conserved throughout isozymes and species. The active sites of both the Escherichia coli and rat liver MAT reside between two subunits, with contributions from side chains of residues from both subunits, resulting in a dimer as the minimal catalytic entity. The side chains that contribute to the ligand binding sites are conserved between the two proteins. In the structures of complexes with the E. coli enzyme, the phosphate groups have the same positions in the (PPi plus Pi) complex and the (ADP plus Pi) complex, and are located at the bottom of a deep cavity with the adenosyl group nearer the entrance []; GO: 0004478 methionine adenosyltransferase activity; PDB: 3S82_B 2OBV_A 3RV2_A 1FUG_A 1RG9_D 1XRA_A 1P7L_C 1XRB_A 1MXA_A 1MXB_A ....
Probab=100.00 E-value=1.6e-50 Score=384.93 Aligned_cols=117 Identities=64% Similarity=1.123 Sum_probs=106.5
Q ss_pred CCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCCCceeEEEEe-cCCceeEEeEEEEeeccCC
Q psy15208 295 DQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRY-DNGKPVAIDTIVLSTQHDP 373 (1027)
Q Consensus 295 ~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~~~pd~k~qv~~~y-~~~~~~~~~~~~~s~qh~~ 373 (1027)
++|||||||||||||||||+||||||+|||+|++||+++||+|.+|||||||||||||+| ++++|+||++||||+||++
T Consensus 2 ~~GAGDQGimfGYA~~ET~~~MPl~i~lAh~L~~~l~~~R~~~~~~~l~PD~KsQVtveY~~~~~P~ri~tivvS~QH~~ 81 (120)
T PF02772_consen 2 EIGAGDQGIMFGYACDETPELMPLPIVLAHRLARRLAEVRKNGELPWLRPDGKSQVTVEYDENGKPVRIDTIVVSTQHDE 81 (120)
T ss_dssp CCSBSS-EEEEEEEETTSTTSS-HHHHHHHHHHHHHHHHHHTSSSTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEEE-T
T ss_pred CcCcCcceEEEeeEcCCCCccCChHHHHHHHHHHHHHHHHhcccCcccCCCcceeEEEeeccCCceeeeeEEEEEecCCC
Confidence 689999999999999999999999999999999999999999999999999999999999 6899999999999999999
Q ss_pred CCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCc
Q psy15208 374 EIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRF 411 (1027)
Q Consensus 374 ~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f 411 (1027)
+++++++|++|+++||+||+|++++ ++|+|+|||||||
T Consensus 82 ~i~~~~ir~~i~e~Vi~~v~~~~~~~~~t~~~INPtGrF 120 (120)
T PF02772_consen 82 DISLEEIREDIKEKVIKPVIPEYLLDEDTKILINPTGRF 120 (120)
T ss_dssp TS-HHHHHHHHHHHTHHHHSHGGG-BTT-EEEESTTS--
T ss_pred CCCHHHHHHHHHHHHHHHhcccccCCCCcEEEECCCCCC
Confidence 9999999999999999999999877 5799999999998
No 18
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=100.00 E-value=5.7e-40 Score=329.33 Aligned_cols=160 Identities=60% Similarity=0.927 Sum_probs=143.0
Q ss_pred cchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCC
Q psy15208 788 NLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGD 867 (1027)
Q Consensus 788 n~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aD 867 (1027)
|+|||+||++++++|.|+++++||+|+|+|||+||+++|++|+++||+|+|+|+||+++++|.++||++.++++++..+|
T Consensus 1 N~yG~g~S~~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~ad 80 (162)
T PF00670_consen 1 NRYGTGQSLVDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDAD 80 (162)
T ss_dssp HHHHHHHHHHHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-S
T ss_pred CccccchhHHHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhcc--ceeccccceeeeecCCCcEEEEecCCccccccCC
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCG 945 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~~--~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~ 945 (1027)
+||++||++++++.++|++||+|++|+|+||||.|||++++... +++++++++.+|++|||+.|+||++||+|||+|+
T Consensus 81 i~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~Eid~~~L~~~~~~~~~v~~~v~~y~l~~G~~i~lLa~GrlvNL~~a 160 (162)
T PF00670_consen 81 IFVTATGNKDVITGEHFRQMKDGAILANAGHFDVEIDVDALEANAVEREEVRPQVDRYTLPDGRRIILLAEGRLVNLAAA 160 (162)
T ss_dssp EEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTSBTHHHHHTCTSEEEEEETTEEEEEETTSEEEEEEGGGSBHHHHHS
T ss_pred EEEECCCCccccCHHHHHHhcCCeEEeccCcCceeEeeccccccCcEEEEcCCCeeEEEeCCCCEEEEEECCCEEeecCc
Confidence 99999999999999999999999999999999999999999866 8899999999999999999999999999999999
Q ss_pred CC
Q psy15208 946 TG 947 (1027)
Q Consensus 946 ~G 947 (1027)
+|
T Consensus 161 ~g 162 (162)
T PF00670_consen 161 TG 162 (162)
T ss_dssp -S
T ss_pred CC
Confidence 87
No 19
>PF00438 S-AdoMet_synt_N: S-adenosylmethionine synthetase, N-terminal domain; InterPro: IPR022628 The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold. This entry represents the N-terminal domain of S-adenosylmethionine synthetase and is found in association with PF02772 from PFAM and PF02773 from PFAM. S-adenosylmethionine synthetase (MAT, 2.5.1.6 from EC) is the enzyme that catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP []. AdoMet is an important methyl donor for transmethylation and is also the propylamino donor in polyamine biosynthesis. In bacteria there is a single isoform of AdoMet synthetase (gene metK), there are two in budding yeast (genes SAM1 and SAM2) and in mammals while in plants there is generally a multigene family. The sequence of AdoMet synthetase is highly conserved throughout isozymes and species. The active sites of both the Escherichia coli and rat liver MAT reside between two subunits, with contributions from side chains of residues from both subunits, resulting in a dimer as the minimal catalytic entity. The side chains that contribute to the ligand binding sites are conserved between the two proteins. In the structures of complexes with the E. coli enzyme, the phosphate groups have the same positions in the (PPi plus Pi) complex and the (ADP plus Pi) complex, and are located at the bottom of a deep cavity with the adenosyl group nearer the entrance []; GO: 0004478 methionine adenosyltransferase activity; PDB: 3RV2_A 3TDE_B 3S82_B 3IML_B 2P02_A 2OBV_A 1QM4_B 1O9T_B 1O93_A 1O92_B ....
Probab=99.91 E-value=1.4e-25 Score=207.32 Aligned_cols=99 Identities=53% Similarity=0.843 Sum_probs=92.3
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNID 261 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~ 261 (1027)
.++|++|++.+|||||+||+|+++++|++|++||++|+|||+++++++|+|+||+++++++|+++|||+++++|||++++
T Consensus 2 ~~lfTSESV~~GHPDKicDqISDailD~~l~~dp~arVA~E~~~~~~~v~i~GEi~~~~~vd~~~ivR~~i~~IGY~~~~ 81 (100)
T PF00438_consen 2 KYLFTSESVSEGHPDKICDQISDAILDACLKQDPNARVACETLVSTGMVIIAGEITSRAYVDIEKIVREVIKDIGYDDSE 81 (100)
T ss_dssp EEEEEEEEE-TTSHHHHHHHHHHHHHHHHHHH-TT-EEEEEEEEETTEEEEEEEEESSHHHTHHHHHHHHHHHHT-EEGG
T ss_pred ceEEeeccccCCCchhhhceeeeccchHHHhcCCCCeEEEEEEeeccEEEEEEEeccchhhhHHHHHHHHHHHhCCCCcc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEeeccCCh
Q psy15208 262 YGIDYKSCAVLLIYNKQSL 280 (1027)
Q Consensus 262 ~g~~~~~~~~~~~i~~qs~ 280 (1027)
+|||+++|+|++.|++|||
T Consensus 82 ~gfd~~tc~V~~~i~~QSp 100 (100)
T PF00438_consen 82 YGFDYDTCEVLVAIHEQSP 100 (100)
T ss_dssp GTEETTTSEEEEEEEEE-H
T ss_pred CCCCCCcceEEEeecccCc
Confidence 9999999999999999997
No 20
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.82 E-value=1.5e-19 Score=183.88 Aligned_cols=196 Identities=35% Similarity=0.620 Sum_probs=167.6
Q ss_pred eEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD 84 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~ 84 (1027)
..++.|+++.|++.+..-.++. ++.|+.|++|..+.++|+++|+....++..|.++||.++.+|+||.|+|.+.+.
T Consensus 4 ~~~v~i~Gp~G~le~~~~~~~~----~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD 79 (210)
T COG2945 4 MPTVIINGPAGRLEGRYEPAKT----PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFD 79 (210)
T ss_pred CCcEEecCCcccceeccCCCCC----CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCccc
Confidence 3457899999999886654442 578999999999999999999999999999999999999999999999999998
Q ss_pred CccchHHHHHHHHHHHHHhCCCCcE-EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---CCCCCCCCcEEEEE
Q psy15208 85 SGNGETDDMEILLRYIQKKYPYLPI-ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK---WLIPEVPKNTIIIH 160 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~~~~pv-iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~---~~l~~i~~PvLiIh 160 (1027)
..-++.+|+.++++|++.++|..+. .|.|+|+|+++++.+|.+.|+ ....+...|.... +.+..+++|.++++
T Consensus 80 ~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~~~dfs~l~P~P~~~lvi~ 156 (210)
T COG2945 80 NGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPINAYDFSFLAPCPSPGLVIQ 156 (210)
T ss_pred CCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc---ccceeeccCCCCchhhhhccCCCCCceeEe
Confidence 8889999999999999999988775 889999999999999999987 6677777777763 35778899999999
Q ss_pred eCCCCCCChHHHHhhhCCCCCceEe--eccccCCCCccccchhhhhhHH
Q psy15208 161 GELDEIIPLKDVFLWANPLDIPVVV--IPESVSEGHPDKIADQISDAIL 207 (1027)
Q Consensus 161 G~~D~iVP~~~~~~l~~~~~~~~L~--t~Esv~~GHPdkvaDqIsdaIL 207 (1027)
|+.|+++++.....|.+......+. ...|+.+++.+.+.+.+.+.+.
T Consensus 157 g~~Ddvv~l~~~l~~~~~~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 157 GDADDVVDLVAVLKWQESIKITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred cChhhhhcHHHHHHhhcCCCCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 9999999999999999986655444 4466677777777766666553
No 21
>PHA02857 monoglyceride lipase; Provisional
Probab=99.78 E-value=7.6e-18 Score=184.93 Aligned_cols=157 Identities=22% Similarity=0.309 Sum_probs=126.4
Q ss_pred cCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---CCcc
Q psy15208 12 GSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---DSGN 87 (1027)
Q Consensus 12 t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~~~~ 87 (1027)
+++| ++++..|.|.. .++++|+++||++++. ..|..+++.|+++||+|+++|+||||.|.+.. ..+.
T Consensus 7 ~~~g~~l~~~~~~~~~----~~~~~v~llHG~~~~~-----~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~ 77 (276)
T PHA02857 7 NLDNDYIYCKYWKPIT----YPKALVFISHGAGEHS-----GRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFG 77 (276)
T ss_pred cCCCCEEEEEeccCCC----CCCEEEEEeCCCcccc-----chHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHH
Confidence 4567 79999998853 4678889999985432 35888999999999999999999999998643 2334
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---------------------
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK--------------------- 146 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--------------------- 146 (1027)
..+.|+...++++...++..+++|+||||||.+++.++.++|+ .++++|+++|....
T Consensus 78 ~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~--~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (276)
T PHA02857 78 VYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN--LFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNK 155 (276)
T ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc--ccceEEEeccccccccccHHHHHHHHHHHHhCCCC
Confidence 5677888888877766676789999999999999999999998 78999999874210
Q ss_pred --------C---------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 147 --------W---------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 147 --------~---------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+ .+..+++|+|++||++|.++|++.+..+.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~ 235 (276)
T PHA02857 156 IVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHA 235 (276)
T ss_pred ccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHc
Confidence 0 03467899999999999999999998877654
No 22
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.78 E-value=6.9e-18 Score=190.86 Aligned_cols=200 Identities=16% Similarity=0.198 Sum_probs=143.7
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+...+.+.+| +++++.|.|.+. .+++++|||+||++... ...+..++..|+++||+|+++|+||||.|.+.
T Consensus 31 ~~~~~~~~~~dg~~l~~~~~~~~~~--~~~~~~VvllHG~~~~~----~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~ 104 (330)
T PLN02298 31 KGSKSFFTSPRGLSLFTRSWLPSSS--SPPRALIFMVHGYGNDI----SWTFQSTAIFLAQMGFACFALDLEGHGRSEGL 104 (330)
T ss_pred ccccceEEcCCCCEEEEEEEecCCC--CCCceEEEEEcCCCCCc----ceehhHHHHHHHhCCCEEEEecCCCCCCCCCc
Confidence 344556788888 799988887641 24678999999985321 12366788889999999999999999999753
Q ss_pred C---CCccchHHHHHHHHHHHHHh--CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-------cC---
Q psy15208 83 Y---DSGNGETDDMEILLRYIQKK--YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-------KW--- 147 (1027)
Q Consensus 83 ~---~~~~~~~~Dv~avl~~L~~~--~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-------~~--- 147 (1027)
. .+.+..++|+.++++++... ++..+++|+||||||.+++.++.++|+ +++++|+++|... .+
T Consensus 105 ~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~ 182 (330)
T PLN02298 105 RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--GFDGAVLVAPMCKISDKIRPPWPIP 182 (330)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--cceeEEEecccccCCcccCCchHHH
Confidence 2 24556789999999999764 344579999999999999999999998 7999999987421 00
Q ss_pred ---------------------------------------------------------------CCCCCCCcEEEEEeCCC
Q psy15208 148 ---------------------------------------------------------------LIPEVPKNTIIIHGELD 164 (1027)
Q Consensus 148 ---------------------------------------------------------------~l~~i~~PvLiIhG~~D 164 (1027)
.+..+.+|+|++||++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D 262 (330)
T PLN02298 183 QILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSAD 262 (330)
T ss_pred HHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCC
Confidence 01246799999999999
Q ss_pred CCCChHHHHhhhCCCC---CceEeecc--cc-CCCCccccchhhhhhHHHHHH
Q psy15208 165 EIIPLKDVFLWANPLD---IPVVVIPE--SV-SEGHPDKIADQISDAILDEIF 211 (1027)
Q Consensus 165 ~iVP~~~~~~l~~~~~---~~~L~t~E--sv-~~GHPdkvaDqIsdaILD~~L 211 (1027)
.++|++.+..+++.+. ......++ |. ...+|+...+.+.+.+.+.+.
T Consensus 263 ~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~ 315 (330)
T PLN02298 263 VVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLN 315 (330)
T ss_pred CCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHH
Confidence 9999999988766542 22333332 11 123455545555555555433
No 23
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.77 E-value=1.8e-17 Score=189.38 Aligned_cols=191 Identities=23% Similarity=0.266 Sum_probs=138.5
Q ss_pred EEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---C
Q psy15208 9 NINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---D 84 (1027)
Q Consensus 9 ~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~ 84 (1027)
.+.+++| ++++..|.|.+ ..++++|||+||++.+ .. .+|..+++.|+++||+|+++|+||||.|++.. .
T Consensus 65 ~~~~~~g~~l~~~~~~p~~---~~~~~~iv~lHG~~~~---~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 137 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPEN---SRPKAAVCFCHGYGDT---CT-FFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIP 137 (349)
T ss_pred eEEcCCCCEEEEEEEecCC---CCCCeEEEEECCCCCc---cc-hHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcC
Confidence 3445666 89999999865 2467899999998532 21 24678899999899999999999999998632 3
Q ss_pred CccchHHHHHHHHHHHHHh--CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-----------------
Q psy15208 85 SGNGETDDMEILLRYIQKK--YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK----------------- 145 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~--~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~----------------- 145 (1027)
++..+++|+.++++.+... ++..+++|+||||||.+++.++.++|+ +++++|+++|...
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~--~v~glVLi~p~~~~~~~~~~~~~~~~~~~~ 215 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN--AWDGAILVAPMCKIADDVVPPPLVLQILIL 215 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcc--hhhheeEecccccccccccCchHHHHHHHH
Confidence 5566788888888887653 344579999999999999999999998 7999999986310
Q ss_pred --------------c-----C-------------------------------------CCCCCCCcEEEEEeCCCCCCCh
Q psy15208 146 --------------K-----W-------------------------------------LIPEVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 146 --------------~-----~-------------------------------------~l~~i~~PvLiIhG~~D~iVP~ 169 (1027)
. + .+.++++|+|++||++|.++|+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 216 LANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 0 0 0345789999999999999999
Q ss_pred HHHHhhhCCCC---CceEeecc--ccC-CCCccccchhhhhhHHH
Q psy15208 170 KDVFLWANPLD---IPVVVIPE--SVS-EGHPDKIADQISDAILD 208 (1027)
Q Consensus 170 ~~~~~l~~~~~---~~~L~t~E--sv~-~GHPdkvaDqIsdaILD 208 (1027)
+.+..+++.+. ......++ |.. .+.|+...+++.+.+++
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~ 340 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIIS 340 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHH
Confidence 99887766542 23333332 222 24555544445555554
No 24
>KOG1455|consensus
Probab=99.76 E-value=1.4e-17 Score=180.62 Aligned_cols=195 Identities=21% Similarity=0.232 Sum_probs=152.6
Q ss_pred EEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---
Q psy15208 8 FNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--- 83 (1027)
Q Consensus 8 i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--- 83 (1027)
-.+.+++| .+.+..|.|... .+++..|+++||++.+.+ ..|+.++..|+..||.|+++|++|||.|+|..
T Consensus 30 ~~~~n~rG~~lft~~W~p~~~--~~pr~lv~~~HG~g~~~s----~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi 103 (313)
T KOG1455|consen 30 SFFTNPRGAKLFTQSWLPLSG--TEPRGLVFLCHGYGEHSS----WRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYV 103 (313)
T ss_pred eeEEcCCCCEeEEEecccCCC--CCCceEEEEEcCCcccch----hhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccC
Confidence 45777888 899999999652 257889999999865542 35788999999999999999999999999743
Q ss_pred CCccchHHHHHHHHHHHHH--hCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC-----------------
Q psy15208 84 DSGNGETDDMEILLRYIQK--KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV----------------- 144 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~--~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~----------------- 144 (1027)
+++...++|+...++.+.. .++..|.+|+||||||++++.++.+.|. ..+|+|+++|..
T Consensus 104 ~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--~w~G~ilvaPmc~i~~~~kp~p~v~~~l~ 181 (313)
T KOG1455|consen 104 PSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--FWDGAILVAPMCKISEDTKPHPPVISILT 181 (313)
T ss_pred CcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--ccccceeeecccccCCccCCCcHHHHHHH
Confidence 5677889999998887554 4567799999999999999999999888 579999999731
Q ss_pred ------CcC--------------------------------------------------CCCCCCCcEEEEEeCCCCCCC
Q psy15208 145 ------KKW--------------------------------------------------LIPEVPKNTIIIHGELDEIIP 168 (1027)
Q Consensus 145 ------~~~--------------------------------------------------~l~~i~~PvLiIhG~~D~iVP 168 (1027)
+.| .+.++..|.+++||++|.++.
T Consensus 182 ~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTD 261 (313)
T KOG1455|consen 182 LLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTD 261 (313)
T ss_pred HHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccC
Confidence 111 167889999999999999999
Q ss_pred hHHHHhhhCCCC---CceEeec---cccCCCCccccchhhhhhHHHHH
Q psy15208 169 LKDVFLWANPLD---IPVVVIP---ESVSEGHPDKIADQISDAILDEI 210 (1027)
Q Consensus 169 ~~~~~~l~~~~~---~~~L~t~---Esv~~GHPdkvaDqIsdaILD~~ 210 (1027)
+..+..+++... ......+ ++...|.+++..+.+...|++.+
T Consensus 262 p~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl 309 (313)
T KOG1455|consen 262 PKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWL 309 (313)
T ss_pred cHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHH
Confidence 999998877533 2223333 23334567777777777777654
No 25
>PRK13604 luxD acyl transferase; Provisional
Probab=99.74 E-value=7e-17 Score=179.31 Aligned_cols=164 Identities=17% Similarity=0.146 Sum_probs=129.2
Q ss_pred EEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCC
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV-GASSGTY 83 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh-G~S~g~~ 83 (1027)
....+.+.+| +|.+++..|++. ...+.++||++||++ +... .+..++++|+++||.|+.+|+||| |.|++.+
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~---~~~~--~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~ 83 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKEN-SPKKNNTILIASGFA---RRMD--HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI 83 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCccc-CCCCCCEEEEeCCCC---CChH--HHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc
Confidence 3456788888 899999988631 135678999999984 3432 488999999999999999999998 9998865
Q ss_pred C--CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----------c-----
Q psy15208 84 D--SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK----------K----- 146 (1027)
Q Consensus 84 ~--~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~----------~----- 146 (1027)
. +......|+.++++|++.+ ...+++|+||||||.+|+..|... +++++|+.+|... .
T Consensus 84 ~~~t~s~g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~----~v~~lI~~sp~~~l~d~l~~~~~~~~~~~ 158 (307)
T PRK13604 84 DEFTMSIGKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI----DLSFLITAVGVVNLRDTLERALGYDYLSL 158 (307)
T ss_pred ccCcccccHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC----CCCEEEEcCCcccHHHHHHHhhhcccccC
Confidence 2 2234589999999999886 345799999999999997777632 3889999998744 0
Q ss_pred -C----------------------------C--------CCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 147 -W----------------------------L--------IPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 147 -~----------------------------~--------l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
+ . ...++.|+|++||++|.+||++.+..+++.++
T Consensus 159 p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~ 229 (307)
T PRK13604 159 PIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIR 229 (307)
T ss_pred cccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhc
Confidence 0 0 22456999999999999999999988877553
No 26
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.71 E-value=4.7e-16 Score=181.82 Aligned_cols=196 Identities=17% Similarity=0.100 Sum_probs=141.2
Q ss_pred CceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 3 m~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
...+.+.|+..+| ++.++++.|+. ..+.|+||++||+. +... ..|..+++.|+++||.|+++|+||||.|.+
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~---~~~~P~Vli~gG~~---~~~~-~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~ 238 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKG---DGPFPTVLVCGGLD---SLQT-DYYRLFRDYLAPRGIAMLTIDMPSVGFSSK 238 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCC---CCCccEEEEeCCcc---cchh-hhHHHHHHHHHhCCCEEEEECCCCCCCCCC
Confidence 3467788999899 89999999974 35678888877752 2222 246778999999999999999999999976
Q ss_pred CCCCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC------------
Q psy15208 82 TYDSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------ 147 (1027)
Q Consensus 82 ~~~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------ 147 (1027)
.... ........++++++.... +..+++++||||||.+++.+|..+|+ +++++|+++|....+
T Consensus 239 ~~~~-~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~--ri~a~V~~~~~~~~~~~~~~~~~~~p~ 315 (414)
T PRK05077 239 WKLT-QDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP--RLKAVACLGPVVHTLLTDPKRQQQVPE 315 (414)
T ss_pred CCcc-ccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc--CceEEEEECCccchhhcchhhhhhchH
Confidence 3211 122233357788887653 34579999999999999999999887 799999998754200
Q ss_pred ---------------------------C-------CCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC-ceEeeccccCC
Q psy15208 148 ---------------------------L-------IPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI-PVVVIPESVSE 192 (1027)
Q Consensus 148 ---------------------------~-------l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~-~~L~t~Esv~~ 192 (1027)
. ..++++|+|++||++|+++|++.+..+.+.... ..+..++....
T Consensus 316 ~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~~~~ 395 (414)
T PRK05077 316 MYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFKPVY 395 (414)
T ss_pred HHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCCCcc
Confidence 0 135789999999999999999999987765533 33444443333
Q ss_pred CCccccchhhhhhHHH
Q psy15208 193 GHPDKIADQISDAILD 208 (1027)
Q Consensus 193 GHPdkvaDqIsdaILD 208 (1027)
..+++..+.+.+++.+
T Consensus 396 e~~~~~~~~i~~wL~~ 411 (414)
T PRK05077 396 RNFDKALQEISDWLED 411 (414)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4555555555555543
No 27
>PRK10749 lysophospholipase L2; Provisional
Probab=99.71 E-value=2.1e-16 Score=179.35 Aligned_cols=124 Identities=17% Similarity=0.144 Sum_probs=98.9
Q ss_pred EEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---
Q psy15208 8 FNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--- 83 (1027)
Q Consensus 8 i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--- 83 (1027)
..+...+| ++++..|.|.. ++++|||+||++.+ . ..|..++..|+++||+|+++|+||||.|++..
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~-----~~~~vll~HG~~~~---~--~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 102 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPH-----HDRVVVICPGRIES---Y--VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDP 102 (330)
T ss_pred eEEEcCCCCEEEEEEccCCC-----CCcEEEEECCccch---H--HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCC
Confidence 44555566 78888887643 45789999997432 2 24778898899999999999999999997532
Q ss_pred -----CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 -----DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 -----~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.++...+.|+.++++.+....+..+++++||||||.+++.++.++|+ .++++|+++|.
T Consensus 103 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~p~ 165 (330)
T PRK10749 103 HRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG--VFDAIALCAPM 165 (330)
T ss_pred CcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC--CcceEEEECch
Confidence 23456788888888887666566789999999999999999999998 78999999874
No 28
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.69 E-value=8.5e-16 Score=172.14 Aligned_cols=194 Identities=22% Similarity=0.289 Sum_probs=144.3
Q ss_pred EEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC-C---C
Q psy15208 8 FNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS-G---T 82 (1027)
Q Consensus 8 i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~-g---~ 82 (1027)
-.+.+.+| .+++..|.+.. .++.+||++||++.+.+ .|..++..|..+||.|+++|+||||.|. + .
T Consensus 12 ~~~~~~d~~~~~~~~~~~~~----~~~g~Vvl~HG~~Eh~~-----ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~ 82 (298)
T COG2267 12 GYFTGADGTRLRYRTWAAPE----PPKGVVVLVHGLGEHSG-----RYEELADDLAARGFDVYALDLRGHGRSPRGQRGH 82 (298)
T ss_pred ceeecCCCceEEEEeecCCC----CCCcEEEEecCchHHHH-----HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCC
Confidence 34555566 78888888775 34589999999866543 5778999999999999999999999997 3 3
Q ss_pred CCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC------------------
Q psy15208 83 YDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV------------------ 144 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~------------------ 144 (1027)
..++.....|+.++++.+....+..|++|+||||||.+++.++.+++. +++++|+.+|..
T Consensus 83 ~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~--~i~~~vLssP~~~l~~~~~~~~~~~~~~~~ 160 (298)
T COG2267 83 VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPP--RIDGLVLSSPALGLGGAILRLILARLALKL 160 (298)
T ss_pred chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCc--cccEEEEECccccCChhHHHHHHHHHhccc
Confidence 345677889999999988887777899999999999999999999996 799999999841
Q ss_pred ----------Cc----C---------------------------------------------CCCCCCCcEEEEEeCCCC
Q psy15208 145 ----------KK----W---------------------------------------------LIPEVPKNTIIIHGELDE 165 (1027)
Q Consensus 145 ----------~~----~---------------------------------------------~l~~i~~PvLiIhG~~D~ 165 (1027)
.. . ....+..|+|+++|++|.
T Consensus 161 ~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~ 240 (298)
T COG2267 161 LGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDR 240 (298)
T ss_pred ccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCc
Confidence 11 1 023457999999999999
Q ss_pred CCC-hHHHHhhhCCCCC---ceEeeccccCCCCccccc--hhhhhhHHHHHHh
Q psy15208 166 IIP-LKDVFLWANPLDI---PVVVIPESVSEGHPDKIA--DQISDAILDEIFL 212 (1027)
Q Consensus 166 iVP-~~~~~~l~~~~~~---~~L~t~Esv~~GHPdkva--DqIsdaILD~~L~ 212 (1027)
+++ .+...++.+.... .....++..++-+.+.-. ++..+.+.+.+.+
T Consensus 241 vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 241 VVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred cccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 999 6777766654432 244444443343434333 5666666554443
No 29
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.68 E-value=2.8e-15 Score=174.18 Aligned_cols=164 Identities=22% Similarity=0.270 Sum_probs=128.3
Q ss_pred EEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--
Q psy15208 7 FFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-- 83 (1027)
Q Consensus 7 ~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-- 83 (1027)
...+.++++ .+++..|.|.. ..++++|||+||++. + ...|..+++.|+++||+|+++|+||||.|++..
T Consensus 112 ~~~~~~~~~~~l~~~~~~p~~---~~~~~~Vl~lHG~~~---~--~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~ 183 (395)
T PLN02652 112 TSLFYGARRNALFCRSWAPAA---GEMRGILIIIHGLNE---H--SGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGY 183 (395)
T ss_pred EEEEECCCCCEEEEEEecCCC---CCCceEEEEECCchH---H--HHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC
Confidence 345666666 78888998864 246789999999743 2 224788999999999999999999999998642
Q ss_pred -CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC-cCCccEEEEEccCCC----------------
Q psy15208 84 -DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK-EISIKILILISVAVK---------------- 145 (1027)
Q Consensus 84 -~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~~---------------- 145 (1027)
.+.+...+|+..+++++...++..+++++||||||.+++.++. +|+ ..+++++|+.+|...
T Consensus 184 ~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~ 262 (395)
T PLN02652 184 VPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFS 262 (395)
T ss_pred CcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHH
Confidence 2445678999999999988877778999999999999998765 553 126899999987420
Q ss_pred ----cC--------------------------------------------------CCCCCCCcEEEEEeCCCCCCChHH
Q psy15208 146 ----KW--------------------------------------------------LIPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 146 ----~~--------------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
.+ .+..+++|+|++||++|.++|++.
T Consensus 263 ~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~ 342 (395)
T PLN02652 263 LVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLA 342 (395)
T ss_pred HhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHH
Confidence 00 024567999999999999999999
Q ss_pred HHhhhCCC
Q psy15208 172 VFLWANPL 179 (1027)
Q Consensus 172 ~~~l~~~~ 179 (1027)
+..+++..
T Consensus 343 a~~l~~~~ 350 (395)
T PLN02652 343 SQDLYNEA 350 (395)
T ss_pred HHHHHHhc
Confidence 99886653
No 30
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.66 E-value=2.4e-15 Score=165.67 Aligned_cols=180 Identities=19% Similarity=0.212 Sum_probs=122.9
Q ss_pred ecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccc
Q psy15208 11 NGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNG 88 (1027)
Q Consensus 11 ~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~ 88 (1027)
+..+.++++..+... ...++|||+||++. +. ..|..+++.|.+ +|+|+++|+||||.|+... .+.+.
T Consensus 8 ~~~~~~~~~~~~~~~-----~~~~plvllHG~~~---~~--~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~ 76 (276)
T TIGR02240 8 DLDGQSIRTAVRPGK-----EGLTPLLIFNGIGA---NL--ELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPG 76 (276)
T ss_pred ccCCcEEEEEEecCC-----CCCCcEEEEeCCCc---ch--HHHHHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHH
Confidence 333446666544221 12357899999743 32 257888998865 7999999999999997532 23456
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----------------------c
Q psy15208 89 ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK----------------------K 146 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~----------------------~ 146 (1027)
+++|+.++++.+. ..+++|+||||||.+++.+|.++|+ +++++|+++++.. .
T Consensus 77 ~~~~~~~~i~~l~----~~~~~LvG~S~GG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (276)
T TIGR02240 77 LAKLAARMLDYLD----YGQVNAIGVSWGGALAQQFAHDYPE--RCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQP 150 (276)
T ss_pred HHHHHHHHHHHhC----cCceEEEEECHHHHHHHHHHHHCHH--HhhheEEeccCCccccCCCchhHHHHhcCchhhhcc
Confidence 7778777777763 3479999999999999999999998 7999999875320 0
Q ss_pred ---------C-----------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhh
Q psy15208 147 ---------W-----------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWA 176 (1027)
Q Consensus 147 ---------~-----------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~ 176 (1027)
+ .+..+++|+++++|++|+++|++....+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~ 230 (276)
T TIGR02240 151 SHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLA 230 (276)
T ss_pred ccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHH
Confidence 0 02356789999999999999999988777
Q ss_pred CCCCCceEeeccccCCCCccccchhhhhhHHH
Q psy15208 177 NPLDIPVVVIPESVSEGHPDKIADQISDAILD 208 (1027)
Q Consensus 177 ~~~~~~~L~t~Esv~~GHPdkvaDqIsdaILD 208 (1027)
+.+....+...+. ++..+....+.+.+.+.+
T Consensus 231 ~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~ 261 (276)
T TIGR02240 231 WRIPNAELHIIDD-GHLFLITRAEAVAPIIMK 261 (276)
T ss_pred HhCCCCEEEEEcC-CCchhhccHHHHHHHHHH
Confidence 6554433322232 222223333445555554
No 31
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.64 E-value=1.2e-14 Score=162.39 Aligned_cols=99 Identities=14% Similarity=0.200 Sum_probs=77.5
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----CccchHHHHHHHHHHHHHhCCCCc
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD----SGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~----~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
.|+|||+||++. +. ..|..+++.|++.||+|+++|+||||.|..... +....++|+.++++.+ +..+
T Consensus 46 ~~~lvliHG~~~---~~--~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~ 116 (302)
T PRK00870 46 GPPVLLLHGEPS---WS--YLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL----DLTD 116 (302)
T ss_pred CCEEEEECCCCC---ch--hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----CCCC
Confidence 468899999743 22 258889999988899999999999999975321 2344555555555443 4458
Q ss_pred EEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
++|+||||||.+++.++.++|+ +++++|++++
T Consensus 117 v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~ 148 (302)
T PRK00870 117 VTLVCQDWGGLIGLRLAAEHPD--RFARLVVANT 148 (302)
T ss_pred EEEEEEChHHHHHHHHHHhChh--heeEEEEeCC
Confidence 9999999999999999999998 7999998875
No 32
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.63 E-value=9.9e-15 Score=160.11 Aligned_cols=142 Identities=17% Similarity=0.174 Sum_probs=101.0
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc---cchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSG---NGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~---~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.|.|||+||++.+..++. .+......|++.||+|+++|+||||.|+....+. ...++|+.++++.+ ...++
T Consensus 30 ~~~ivllHG~~~~~~~~~--~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~ 103 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWS--NYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKA 103 (282)
T ss_pred CCeEEEECCCCCchhhHH--HHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCe
Confidence 357899999854322211 1223345676779999999999999998642111 12355665555544 44589
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC--------------------------------------------
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-------------------------------------------- 145 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-------------------------------------------- 145 (1027)
+++||||||.+++.++.++|+ +++++|++++...
T Consensus 104 ~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (282)
T TIGR03343 104 HLVGNSMGGATALNFALEYPD--RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITE 181 (282)
T ss_pred eEEEECchHHHHHHHHHhChH--hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcH
Confidence 999999999999999999998 7999998875310
Q ss_pred -----cC-----------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 146 -----KW-----------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 146 -----~~-----------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.| .+..+++|+++++|++|.++|++.+..+++.++..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~ 252 (282)
T TIGR03343 182 ELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDA 252 (282)
T ss_pred HHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCC
Confidence 00 02346789999999999999999888777765433
No 33
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.63 E-value=8e-15 Score=158.24 Aligned_cols=140 Identities=17% Similarity=0.183 Sum_probs=107.1
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-CCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-DSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
+.+|+|||+||++ ++. ..|..++..|++ +|+|+++|+||||.|.... -+...+++|+.++++++ ...++
T Consensus 14 ~~~~~iv~lhG~~---~~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l----~~~~~ 83 (255)
T PRK10673 14 HNNSPIVLVHGLF---GSL--DNLGVLARDLVN-DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL----QIEKA 83 (255)
T ss_pred CCCCCEEEECCCC---Cch--hHHHHHHHHHhh-CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCce
Confidence 4578899999974 333 257788888875 7999999999999998532 24456777888877765 33479
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------------------------------------------
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------------------------------------------- 146 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------------------------------------------- 146 (1027)
+|+||||||.+++.+|.++|+ +++++|++++.+..
T Consensus 84 ~lvGhS~Gg~va~~~a~~~~~--~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (255)
T PRK10673 84 TFIGHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQF 161 (255)
T ss_pred EEEEECHHHHHHHHHHHhCHh--hcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHH
Confidence 999999999999999999998 79999987532100
Q ss_pred ---------C------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 147 ---------W------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 147 ---------~------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
+ .+..+++|+|+++|++|..++++....+.+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~ 224 (255)
T PRK10673 162 LLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQA 224 (255)
T ss_pred HHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCc
Confidence 0 02345689999999999999999888777765433
No 34
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.63 E-value=1.1e-14 Score=155.18 Aligned_cols=139 Identities=19% Similarity=0.271 Sum_probs=103.1
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCCCc
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
..|+|||+||++. +. ..|..+++.|.+ +|+|+++|+||||.|..... +....+.|+.++++.+ ...+
T Consensus 12 ~~~~iv~lhG~~~---~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~~~~ 81 (257)
T TIGR03611 12 DAPVVVLSSGLGG---SG--SYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----NIER 81 (257)
T ss_pred CCCEEEEEcCCCc---ch--hHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----CCCc
Confidence 4688999999843 32 257778887865 89999999999999976432 2334455555555443 3347
Q ss_pred EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-----------------------------------C------
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-----------------------------------W------ 147 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-----------------------------------~------ 147 (1027)
++++||||||.+++.++.++|+ .++++|++++.... |
T Consensus 82 ~~l~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (257)
T TIGR03611 82 FHFVGHALGGLIGLQLALRYPE--RLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAA 159 (257)
T ss_pred EEEEEechhHHHHHHHHHHChH--HhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccch
Confidence 9999999999999999999988 78999988752110 0
Q ss_pred ---------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 148 ---------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 148 ---------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.+..+++|+++++|++|.++|++.+..+.+..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 227 (257)
T TIGR03611 160 RLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNA 227 (257)
T ss_pred hhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCc
Confidence 03356799999999999999999988777765433
No 35
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.62 E-value=1e-14 Score=162.05 Aligned_cols=98 Identities=11% Similarity=0.052 Sum_probs=77.7
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---------CCccchHHHHHHHHHHHHHh
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---------DSGNGETDDMEILLRYIQKK 103 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---------~~~~~~~~Dv~avl~~L~~~ 103 (1027)
.|+|||+||++. +. ..|+.+++.|+++ |+|+++|+||||.|+... .+.+.+++|+.++++.+.
T Consensus 29 ~~~vlllHG~~~---~~--~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~-- 100 (294)
T PLN02824 29 GPALVLVHGFGG---NA--DHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVV-- 100 (294)
T ss_pred CCeEEEECCCCC---Ch--hHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhc--
Confidence 367899999853 32 2588899999875 799999999999998531 233455666666666553
Q ss_pred CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 104 YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 104 ~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.++++|+||||||.+++.+|.++|+ +++++|++++
T Consensus 101 --~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lili~~ 135 (294)
T PLN02824 101 --GDPAFVICNSVGGVVGLQAAVDAPE--LVRGVMLINI 135 (294)
T ss_pred --CCCeEEEEeCHHHHHHHHHHHhChh--heeEEEEECC
Confidence 3589999999999999999999999 7999999875
No 36
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.62 E-value=5.5e-15 Score=168.19 Aligned_cols=128 Identities=20% Similarity=0.228 Sum_probs=97.6
Q ss_pred EecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChH-----------------HH----HHHHHHHHhCCcE
Q psy15208 10 INGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNK-----------------VV----QTLVRVMLSLGYI 67 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~-----------------~~----~~la~~La~~Gy~ 67 (1027)
+.+.+| +|+++.|.|+. ++++|+++||++.|.+..--. +| ..+++.|+++||.
T Consensus 2 ~~~~~g~~l~~~~~~~~~-----~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKN-----AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeeccC-----CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 456677 78999998864 678999999998876521000 11 4689999999999
Q ss_pred EEEEcCCCCCCCCCC---C---CCccchHHHHHHHHHHHHH-------------------hCC-CCcEEEEEechhHHHH
Q psy15208 68 SIRMNFRGVGASSGT---Y---DSGNGETDDMEILLRYIQK-------------------KYP-YLPIILAGFSFGTFVQ 121 (1027)
Q Consensus 68 Vla~DlrGhG~S~g~---~---~~~~~~~~Dv~avl~~L~~-------------------~~~-~~pviLVGhSmGG~vA 121 (1027)
|+++|+||||.|.+. . .++...++|+..+++.+.. .++ ..|++|+||||||.++
T Consensus 77 V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred EEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 999999999998853 1 2456678899888888765 344 5689999999999999
Q ss_pred HHHHHhcCCc------CCccEEEEEcc
Q psy15208 122 AKLQKRLDKE------ISIKILILISV 142 (1027)
Q Consensus 122 l~~A~~~p~~------~~V~gLVli~p 142 (1027)
+.++..++.. ..++|+|+++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~i~g~i~~s~ 183 (332)
T TIGR01607 157 LRLLELLGKSNENNDKLNIKGCISLSG 183 (332)
T ss_pred HHHHHHhccccccccccccceEEEecc
Confidence 9998765431 24788887765
No 37
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.60 E-value=2.8e-14 Score=155.15 Aligned_cols=98 Identities=13% Similarity=0.181 Sum_probs=75.4
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.|+|||+||++ ++. ..|..+.+.|++ +|+|+++|+||||.|..... +...++.|+.++++.+ ...++
T Consensus 28 ~~~vv~~hG~~---~~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~----~~~~~ 97 (278)
T TIGR03056 28 GPLLLLLHGTG---AST--HSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE----GLSPD 97 (278)
T ss_pred CCeEEEEcCCC---CCH--HHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc----CCCCc
Confidence 57899999973 332 357888888875 79999999999999975332 3345566666555443 44578
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+|+||||||.+++.++.++|+ +++++|++++
T Consensus 98 ~lvG~S~Gg~~a~~~a~~~p~--~v~~~v~~~~ 128 (278)
T TIGR03056 98 GVIGHSAGAAIALRLALDGPV--TPRMVVGINA 128 (278)
T ss_pred eEEEECccHHHHHHHHHhCCc--ccceEEEEcC
Confidence 999999999999999999998 6888887764
No 38
>PLN02965 Probable pheophorbidase
Probab=99.59 E-value=3.8e-14 Score=154.47 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=106.4
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---CCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---DSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.|||+||++. +. ..|+.+++.|++.||+|+++|+||||.|+... .+...+++|+.++++.+.. ..+++|
T Consensus 5 ~vvllHG~~~---~~--~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~l 76 (255)
T PLN02965 5 HFVFVHGASH---GA--WCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP---DHKVIL 76 (255)
T ss_pred EEEEECCCCC---Cc--CcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC---CCCEEE
Confidence 4899999742 22 24888999998889999999999999997432 2345566777777765421 148999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccC---CC----------------------------c---------C----
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVA---VK----------------------------K---------W---- 147 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~---~~----------------------------~---------~---- 147 (1027)
+||||||.+++.++.++|+ +|+++|++++. .. . +
T Consensus 77 vGhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTD--KISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHY 154 (255)
T ss_pred EecCcchHHHHHHHHhCch--heeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHH
Confidence 9999999999999999998 78999988753 00 0 0
Q ss_pred ---------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE
Q psy15208 148 ---------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 148 ---------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L 184 (1027)
.+..+++|+++++|++|.++|++....+.+.+....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~ 224 (255)
T PLN02965 155 YYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQT 224 (255)
T ss_pred HhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceE
Confidence 0114779999999999999999999888877654433
No 39
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.59 E-value=1.6e-14 Score=159.00 Aligned_cols=132 Identities=19% Similarity=0.335 Sum_probs=107.3
Q ss_pred EEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--
Q psy15208 7 FFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD-- 84 (1027)
Q Consensus 7 ~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~-- 84 (1027)
.++++++.|.+.+.++.|.+ ..++|+|||+||++..... ....|..+++.|+++||.|+++|+||||.|.+...
T Consensus 2 ~~~l~~~~g~~~~~~~~p~~---~~~~~~VlllHG~g~~~~~-~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~ 77 (266)
T TIGR03101 2 PFFLDAPHGFRFCLYHPPVA---VGPRGVVIYLPPFAEEMNK-SRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAA 77 (266)
T ss_pred CEEecCCCCcEEEEEecCCC---CCCceEEEEECCCcccccc-hhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccC
Confidence 36788899999998888875 2457899999998542211 12357778999999999999999999999986532
Q ss_pred CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 85 SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
++..+.+|+..++++++.. +..+++|+||||||.+++.++.++|+ +++++|+++|...
T Consensus 78 ~~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~--~v~~lVL~~P~~~ 135 (266)
T TIGR03101 78 RWDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAA--KCNRLVLWQPVVS 135 (266)
T ss_pred CHHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCcc--ccceEEEeccccc
Confidence 3456789999999999875 45689999999999999999999988 7899999998654
No 40
>PLN02511 hydrolase
Probab=99.59 E-value=1e-13 Score=161.17 Aligned_cols=134 Identities=16% Similarity=0.149 Sum_probs=98.6
Q ss_pred EEEEEecCCceEEEEEEec-CCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q psy15208 6 KFFNINGSVGILHCAINFP-SSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD 84 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P-~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~ 84 (1027)
++..+.++||.....-|.+ ........+|+||++||++ |+..+.++..++..+.++||+|+++|+||||.|+...+
T Consensus 72 ~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~---g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~ 148 (388)
T PLN02511 72 RRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLT---GGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTP 148 (388)
T ss_pred eEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCC---CCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCc
Confidence 3446778888444433432 1100113478999999973 33333355677777888999999999999999975322
Q ss_pred C--ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 85 S--GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 85 ~--~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
. .....+|+.++++++..+++..+++++||||||.+++.++.++|+...+.+++++++
T Consensus 149 ~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~ 208 (388)
T PLN02511 149 QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCN 208 (388)
T ss_pred CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECC
Confidence 1 246789999999999999888899999999999999999999998434788777664
No 41
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.58 E-value=9.4e-14 Score=164.28 Aligned_cols=120 Identities=19% Similarity=0.230 Sum_probs=84.3
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH-HHHHHH---hCCcEEEEEcCCCCCCCCCCCC-
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT-LVRVML---SLGYISIRMNFRGVGASSGTYD- 84 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~-la~~La---~~Gy~Vla~DlrGhG~S~g~~~- 84 (1027)
+.+++.++++....|++ .+.+|+|||+||++. +.. .|.. +...|+ +.+|+|+++|+||||.|+....
T Consensus 181 ~~~~~~~l~~~~~gp~~---~~~k~~VVLlHG~~~---s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~ 252 (481)
T PLN03087 181 LSSSNESLFVHVQQPKD---NKAKEDVLFIHGFIS---SSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADS 252 (481)
T ss_pred EeeCCeEEEEEEecCCC---CCCCCeEEEECCCCc---cHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCC
Confidence 34444578888888865 234678999999843 322 3542 345554 3699999999999999985422
Q ss_pred --CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 85 --SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 85 --~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+.+..++|+. ..+....+..+++++||||||.+++.+|.++|+ +++++|++++
T Consensus 253 ~ytl~~~a~~l~---~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe--~V~~LVLi~~ 307 (481)
T PLN03087 253 LYTLREHLEMIE---RSVLERYKVKSFHIVAHSLGCILALALAVKHPG--AVKSLTLLAP 307 (481)
T ss_pred cCCHHHHHHHHH---HHHHHHcCCCCEEEEEECHHHHHHHHHHHhChH--hccEEEEECC
Confidence 2223344442 223333455689999999999999999999999 7999999985
No 42
>KOG1552|consensus
Probab=99.56 E-value=5.6e-14 Score=150.16 Aligned_cols=161 Identities=22% Similarity=0.312 Sum_probs=125.0
Q ss_pred EEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCC
Q psy15208 7 FFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTYD 84 (1027)
Q Consensus 7 ~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~~ 84 (1027)
-+.+.+..| .+.+..+.|+. ...++++++||.+...| . ...+...|.. ..+.++.+|++|+|.|.|.+
T Consensus 37 v~~~~t~rgn~~~~~y~~~~~----~~~~~lly~hGNa~Dlg---q--~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p- 106 (258)
T KOG1552|consen 37 VFKVKTSRGNEIVCMYVRPPE----AAHPTLLYSHGNAADLG---Q--MVELFKELSIFLNCNVVSYDYSGYGRSSGKP- 106 (258)
T ss_pred eEEeecCCCCEEEEEEEcCcc----ccceEEEEcCCcccchH---H--HHHHHHHHhhcccceEEEEecccccccCCCc-
Confidence 345667677 66777777765 35689999999743322 1 1122233322 37999999999999999984
Q ss_pred CccchHHHHHHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc------------C----
Q psy15208 85 SGNGETDDMEILLRYIQKKY-PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------------W---- 147 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~-~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------------~---- 147 (1027)
+..+..+|+.++.++|++.+ +..+++|+|+|||...++.+|++.| ++++|+.+|.... |
T Consensus 107 sE~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~~rv~~~~~~~~~~~d~f 182 (258)
T KOG1552|consen 107 SERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSGMRVAFPDTKTTYCFDAF 182 (258)
T ss_pred ccccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC----cceEEEeccchhhhhhhccCcceEEeeccc
Confidence 66689999999999999999 4678999999999999999999986 6999999986431 1
Q ss_pred ----CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC
Q psy15208 148 ----LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI 181 (1027)
Q Consensus 148 ----~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~ 181 (1027)
-++.+++|+|++||++|+++|+++..++.+..+.
T Consensus 183 ~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~ 220 (258)
T KOG1552|consen 183 PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKE 220 (258)
T ss_pred cccCcceeccCCEEEEecccCceecccccHHHHHhccc
Confidence 1456789999999999999999999877776543
No 43
>PRK10985 putative hydrolase; Provisional
Probab=99.56 E-value=1.4e-13 Score=155.90 Aligned_cols=134 Identities=18% Similarity=0.340 Sum_probs=98.6
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDS 85 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~ 85 (1027)
++..+..+||......|.+... ....+|+||++||++ |+....++..+++.|.++||+|+++|+||||.++.....
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~-~~~~~p~vll~HG~~---g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~ 107 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPA-QARHKPRLVLFHGLE---GSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR 107 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCc-cCCCCCEEEEeCCCC---CCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc
Confidence 3445778888544434433211 123578999999984 333334566789999999999999999999987643211
Q ss_pred --ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 86 --GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 86 --~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
......|+..+++++.+.++..+++++||||||.+++.++..+++...+.++|+++++
T Consensus 108 ~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p 167 (324)
T PRK10985 108 IYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAP 167 (324)
T ss_pred eECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCC
Confidence 1245799999999999888878899999999999988888887653347888888765
No 44
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.56 E-value=4.5e-14 Score=148.90 Aligned_cols=138 Identities=20% Similarity=0.250 Sum_probs=102.4
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--CccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--SGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.+|++||+||++. +. ..|..+++.|. .||+|+++|+||||.|..... +...+++|+..+++.+ +..++
T Consensus 12 ~~~~li~~hg~~~---~~--~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~~~~v 81 (251)
T TIGR02427 12 GAPVLVFINSLGT---DL--RMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL----GIERA 81 (251)
T ss_pred CCCeEEEEcCccc---ch--hhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCce
Confidence 4688999999743 22 24778888886 589999999999999975321 3344556665555544 34479
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---------------------------------C---------
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK---------------------------------W--------- 147 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~---------------------------------~--------- 147 (1027)
+++||||||.+++.+|.++|+ ++++++++++.... +
T Consensus 82 ~liG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T TIGR02427 82 VFCGLSLGGLIAQGLAARRPD--RVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLD 159 (251)
T ss_pred EEEEeCchHHHHHHHHHHCHH--HhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHH
Confidence 999999999999999999988 68888887653110 0
Q ss_pred ----------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC
Q psy15208 148 ----------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI 181 (1027)
Q Consensus 148 ----------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~ 181 (1027)
.+.++++|+++++|++|.++|++....+.+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~ 221 (251)
T TIGR02427 160 LYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG 221 (251)
T ss_pred HHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC
Confidence 0234678999999999999999988877665543
No 45
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.55 E-value=1.3e-13 Score=153.25 Aligned_cols=98 Identities=12% Similarity=0.237 Sum_probs=77.9
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--CccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--SGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.++|||+||++. +. ..|+.+++.|++++ +|+++|+||||.|+.... +...+++|+..+++.+ ...+++
T Consensus 27 g~~vvllHG~~~---~~--~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l----~~~~~~ 96 (295)
T PRK03592 27 GDPIVFLHGNPT---SS--YLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDAL----GLDDVV 96 (295)
T ss_pred CCEEEEECCCCC---CH--HHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCCeE
Confidence 367899999742 22 35888999998865 999999999999985421 3445666666666654 335899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
++||||||.+++.++.++|+ +++++|++++
T Consensus 97 lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~ 126 (295)
T PRK03592 97 LVGHDWGSALGFDWAARHPD--RVRGIAFMEA 126 (295)
T ss_pred EEEECHHHHHHHHHHHhChh--heeEEEEECC
Confidence 99999999999999999998 7999999885
No 46
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=99.55 E-value=2.2e-14 Score=149.07 Aligned_cols=127 Identities=20% Similarity=0.223 Sum_probs=97.9
Q ss_pred cccccccchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHH
Q psy15208 782 TKSKFDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861 (1027)
Q Consensus 782 ~K~~~dn~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e 861 (1027)
.|++.......+++.|..-....+..+.|++|+|+|||.||+.+|+++++|||+|+++|+.+.....+...++...++++
T Consensus 8 ~R~~~~~~~~~~~~~W~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~e 87 (178)
T PF02826_consen 8 LRRLPEYHEAQRNGEWASRERFPGRELRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDE 87 (178)
T ss_dssp HTTHHHHHHHHHTTBHHHHTTTTBS-STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHH
T ss_pred HhCHHHHHHHHHcCCCCCCcCCCccccCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhh
Confidence 34443333334556663334445667999999999999999999999999999999999988655556778889999999
Q ss_pred HhccCCEEEecCC----CcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 862 AKKYGDIFVTCTG----NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 862 ~l~~aDvvi~atG----~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++++|+|+.+.+ |.++|+++.|++||+|+++||+|... -+|.+++.
T Consensus 88 ll~~aDiv~~~~plt~~T~~li~~~~l~~mk~ga~lvN~aRG~-~vde~aL~ 138 (178)
T PF02826_consen 88 LLAQADIVSLHLPLTPETRGLINAEFLAKMKPGAVLVNVARGE-LVDEDALL 138 (178)
T ss_dssp HHHH-SEEEE-SSSSTTTTTSBSHHHHHTSTTTEEEEESSSGG-GB-HHHHH
T ss_pred hcchhhhhhhhhccccccceeeeeeeeeccccceEEEeccchh-hhhhhHHH
Confidence 9999999997654 56999999999999999999999974 45655554
No 47
>PRK10566 esterase; Provisional
Probab=99.53 E-value=1.3e-13 Score=149.25 Aligned_cols=154 Identities=15% Similarity=0.188 Sum_probs=106.4
Q ss_pred EEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--Cc-------c
Q psy15208 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--SG-------N 87 (1027)
Q Consensus 17 I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~~-------~ 87 (1027)
+..+.+.|.+. ..++.|+||++||++ ++.. .|..+++.|+++||+|+++|+||||.|..... .. .
T Consensus 12 ~~~~~~~p~~~-~~~~~p~vv~~HG~~---~~~~--~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~ 85 (249)
T PRK10566 12 IEVLHAFPAGQ-RDTPLPTVFFYHGFT---SSKL--VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILL 85 (249)
T ss_pred cceEEEcCCCC-CCCCCCEEEEeCCCC---cccc--hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHH
Confidence 34455566531 123578999999974 3322 46778999999999999999999997642111 11 1
Q ss_pred chHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEE-EEEccCC---------Cc---------
Q psy15208 88 GETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKIL-ILISVAV---------KK--------- 146 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gL-Vli~p~~---------~~--------- 146 (1027)
...+|+..+++++.... +..+++++||||||.+++.++.++|+ +.+. ++.++.. +.
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (249)
T PRK10566 86 QNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLMGSGYFTSLARTLFPPLIPETAAQQ 162 (249)
T ss_pred HHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCC---eeEEEEeeCcHHHHHHHHHhcccccccccccH
Confidence 23567777788877653 34579999999999999999998876 4443 3333210 00
Q ss_pred ------------C----CCCCC-CCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 147 ------------W----LIPEV-PKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 147 ------------~----~l~~i-~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+ .+.++ .+|+|++||++|+++|++.+..+.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l 212 (249)
T PRK10566 163 AEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQAL 212 (249)
T ss_pred HHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHH
Confidence 0 12344 689999999999999999988776643
No 48
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.53 E-value=3.1e-13 Score=149.60 Aligned_cols=104 Identities=15% Similarity=0.166 Sum_probs=77.0
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.+|.|||+||++. +. ..|..++..|.++||+|+++|+||||.|.........+..++..+.+++.......+++|
T Consensus 17 ~~p~vvliHG~~~---~~--~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~l 91 (273)
T PLN02211 17 QPPHFVLIHGISG---GS--WCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVIL 91 (273)
T ss_pred CCCeEEEECCCCC---Cc--CcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 4688999999743 22 248889999988899999999999998864322112333334444444444323458999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+||||||.+++.++.++|+ +++++|++++
T Consensus 92 vGhS~GG~v~~~~a~~~p~--~v~~lv~~~~ 120 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPK--KICLAVYVAA 120 (273)
T ss_pred EEECchHHHHHHHHHhChh--heeEEEEecc
Confidence 9999999999999999988 7899998865
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.53 E-value=2.9e-13 Score=149.90 Aligned_cols=130 Identities=18% Similarity=0.224 Sum_probs=100.4
Q ss_pred eEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCC-CCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPL-FGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~-~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
++.+.+...+.++.+.++.|.+ ..++.||++||+.. +.|+ +..+..+++.|+++||.|+++|+||||.|.+..
T Consensus 2 ~~~~~~~~~~~~l~g~~~~p~~----~~~~~vv~i~gg~~~~~g~--~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~ 75 (274)
T TIGR03100 2 ERALTFSCEGETLVGVLHIPGA----SHTTGVLIVVGGPQYRVGS--HRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN 75 (274)
T ss_pred CeeEEEEcCCcEEEEEEEcCCC----CCCCeEEEEeCCccccCCc--hhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC
Confidence 3457777777789999999875 22345666676432 1222 224567899999999999999999999998764
Q ss_pred CCccchHHHHHHHHHHHHHhCC-CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 DSGNGETDDMEILLRYIQKKYP-YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~~~-~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
........|+.+++++++...+ ..+++++||||||.+++.++... + +++++|+++|.
T Consensus 76 ~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~--~v~~lil~~p~ 133 (274)
T TIGR03100 76 LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-L--RVAGLVLLNPW 133 (274)
T ss_pred CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-C--CccEEEEECCc
Confidence 4556678999999999987653 45699999999999999998653 3 69999999986
No 50
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.53 E-value=2.7e-13 Score=142.33 Aligned_cols=102 Identities=18% Similarity=0.247 Sum_probs=75.5
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD-SGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~-~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
|+|||+||++ ++.. .|..+++.|+ +||+|+++|+||||.|+.... ......+.+..++..+....+..+++++
T Consensus 2 ~~vv~~hG~~---~~~~--~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 75 (251)
T TIGR03695 2 PVLVFLHGFL---GSGA--DWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLV 75 (251)
T ss_pred CEEEEEcCCC---Cchh--hHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 6789999974 3332 4788999998 799999999999999975321 1112222222224444445556689999
Q ss_pred EechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 113 GFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
||||||.+++.++.++|+ .+++++++++.
T Consensus 76 G~S~Gg~ia~~~a~~~~~--~v~~lil~~~~ 104 (251)
T TIGR03695 76 GYSMGGRIALYYALQYPE--RVQGLILESGS 104 (251)
T ss_pred EeccHHHHHHHHHHhCch--heeeeEEecCC
Confidence 999999999999999998 78999988753
No 51
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.52 E-value=3.3e-13 Score=155.25 Aligned_cols=98 Identities=17% Similarity=0.215 Sum_probs=74.8
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.|+|||+||++. +. ..|..++..|++ +|+|+++|+||||.|+.... +...+++|+.++++.+ ...++
T Consensus 88 gp~lvllHG~~~---~~--~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~ 157 (360)
T PLN02679 88 GPPVLLVHGFGA---SI--PHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV----VQKPT 157 (360)
T ss_pred CCeEEEECCCCC---CH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh----cCCCe
Confidence 467899999843 32 358888888876 89999999999999975421 2344556666655543 33589
Q ss_pred EEEEechhHHHHHHHHHh-cCCcCCccEEEEEcc
Q psy15208 110 ILAGFSFGTFVQAKLQKR-LDKEISIKILILISV 142 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~-~p~~~~V~gLVli~p 142 (1027)
+|+||||||.+++.++.. +|+ +++++|++++
T Consensus 158 ~lvGhS~Gg~ia~~~a~~~~P~--rV~~LVLi~~ 189 (360)
T PLN02679 158 VLIGNSVGSLACVIAASESTRD--LVRGLVLLNC 189 (360)
T ss_pred EEEEECHHHHHHHHHHHhcChh--hcCEEEEECC
Confidence 999999999999998874 687 7999998875
No 52
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.52 E-value=2.8e-13 Score=147.14 Aligned_cols=134 Identities=16% Similarity=0.200 Sum_probs=98.4
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAG 113 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVG 113 (1027)
|+|||+||++. +. ..|..+.+.|.+ .|+|+++|+||||.|.... ..... + +++.+... ...+++|+|
T Consensus 14 ~~ivllHG~~~---~~--~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~~~~-~---~~~~l~~~-~~~~~~lvG 80 (256)
T PRK10349 14 VHLVLLHGWGL---NA--EVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG--ALSLA-D---MAEAVLQQ-APDKAIWLG 80 (256)
T ss_pred CeEEEECCCCC---Ch--hHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC--CCCHH-H---HHHHHHhc-CCCCeEEEE
Confidence 46899999743 32 258889999976 6999999999999997532 11222 2 22233222 345799999
Q ss_pred echhHHHHHHHHHhcCCcCCccEEEEEccCCC--------cC--------------------------------------
Q psy15208 114 FSFGTFVQAKLQKRLDKEISIKILILISVAVK--------KW-------------------------------------- 147 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~--------~~-------------------------------------- 147 (1027)
|||||.+++.+|.++|+ +++++|++++++. .+
T Consensus 81 hS~Gg~ia~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (256)
T PRK10349 81 WSLGGLVASQIALTHPE--RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDA 158 (256)
T ss_pred ECHHHHHHHHHHHhChH--hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHH
Confidence 99999999999999998 7999999876311 00
Q ss_pred --------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 148 --------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 148 --------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.+..+++|+++++|+.|.++|.+.+..+.+.++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~ 225 (256)
T PRK10349 159 RALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS 225 (256)
T ss_pred HHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCC
Confidence 03356799999999999999998888776665443
No 53
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.52 E-value=9e-13 Score=142.48 Aligned_cols=100 Identities=22% Similarity=0.270 Sum_probs=73.7
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-----CccchHHHHHHHHHHHHHhCCCC
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD-----SGNGETDDMEILLRYIQKKYPYL 107 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~-----~~~~~~~Dv~avl~~L~~~~~~~ 107 (1027)
+++|||+||++ +++ ...|..+...|.+.||+|+++|+||||.|..... +...+++|+.++++.+ ...
T Consensus 25 ~~~vl~~hG~~--g~~--~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 96 (288)
T TIGR01250 25 KIKLLLLHGGP--GMS--HEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL----GLD 96 (288)
T ss_pred CCeEEEEcCCC--Ccc--HHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc----CCC
Confidence 57789999963 222 2245566666766699999999999999985421 2334555555554433 444
Q ss_pred cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+++++||||||.+++.++..+|+ +++++|+.++
T Consensus 97 ~~~liG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~ 129 (288)
T TIGR01250 97 KFYLLGHSWGGMLAQEYALKYGQ--HLKGLIISSM 129 (288)
T ss_pred cEEEEEeehHHHHHHHHHHhCcc--ccceeeEecc
Confidence 79999999999999999999998 7899998765
No 54
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.51 E-value=1.1e-13 Score=143.28 Aligned_cols=135 Identities=26% Similarity=0.376 Sum_probs=102.2
Q ss_pred EEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----CccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD----SGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 36 VVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~----~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
|||+||++. +. ..|..+++.|+ +||+|+++|+||||.|..... +....+.|+.++++.+ ...++++
T Consensus 1 vv~~hG~~~---~~--~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~l 70 (228)
T PF12697_consen 1 VVFLHGFGG---SS--ESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL----GIKKVIL 70 (228)
T ss_dssp EEEE-STTT---TG--GGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT----TTSSEEE
T ss_pred eEEECCCCC---CH--HHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc----ccccccc
Confidence 699999743 32 35788999995 799999999999999986431 2233455555544443 3358999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-------c----C---------------------------------
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-------K----W--------------------------------- 147 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-------~----~--------------------------------- 147 (1027)
+|||+||.+++.++.++|+ +++++|+++|... . +
T Consensus 71 vG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (228)
T PF12697_consen 71 VGHSMGGMIALRLAARYPD--RVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLI 148 (228)
T ss_dssp EEETHHHHHHHHHHHHSGG--GEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccccccccccccccc--ccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccc
Confidence 9999999999999999998 7999999998762 0 0
Q ss_pred ----------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 148 ----------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 148 ----------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.+..+++|+++++|++|.++|.+....+.+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~ 205 (228)
T PF12697_consen 149 RSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNA 205 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTE
T ss_pred cccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCC
Confidence 02456899999999999999988888777644433
No 55
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.51 E-value=2e-13 Score=143.62 Aligned_cols=135 Identities=17% Similarity=0.252 Sum_probs=99.1
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
+|+|||+||++. +. ..|..+++.|++ +|+|+++|+||||.|..... .++..+.+.+....+ .+++++
T Consensus 4 ~~~iv~~HG~~~---~~--~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~------~~~~~~~~~~~~~~~-~~~~lv 70 (245)
T TIGR01738 4 NVHLVLIHGWGM---NA--EVFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP------LSLADAAEAIAAQAP-DPAIWL 70 (245)
T ss_pred CceEEEEcCCCC---ch--hhHHHHHHhhcc-CeEEEEecCCcCccCCCCCC------cCHHHHHHHHHHhCC-CCeEEE
Confidence 367899999743 32 257888998875 79999999999999875421 122333333333322 489999
Q ss_pred EechhHHHHHHHHHhcCCcCCccEEEEEccCCC-----cC----------------------------------------
Q psy15208 113 GFSFGTFVQAKLQKRLDKEISIKILILISVAVK-----KW---------------------------------------- 147 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-----~~---------------------------------------- 147 (1027)
||||||.+++.++.++|+ +++++|++++.+. .|
T Consensus 71 G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPD--RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQ 148 (245)
T ss_pred EEcHHHHHHHHHHHHCHH--hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccch
Confidence 999999999999999998 7899998865321 00
Q ss_pred ----------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 148 ----------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 148 ----------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.+..+++|+++++|++|.++|++....+.+.+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~ 217 (245)
T TIGR01738 149 DARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHS 217 (245)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCC
Confidence 02457799999999999999999888776655433
No 56
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.50 E-value=2.8e-13 Score=133.39 Aligned_cols=130 Identities=28% Similarity=0.396 Sum_probs=103.8
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHH-hCCCCcEEEEE
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQK-KYPYLPIILAG 113 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~-~~~~~pviLVG 113 (1027)
+|||+||++ ++ ...|..+++.|+++||.|+.+|+|++|.+.+ ..++..+++++.. ..+..+++|+|
T Consensus 1 ~vv~~HG~~---~~--~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWG---GS--RRDYQPLAEALAEQGYAVVAFDYPGHGDSDG--------ADAVERVLADIRAGYPDPDRIILIG 67 (145)
T ss_dssp EEEEECTTT---TT--THHHHHHHHHHHHTTEEEEEESCTTSTTSHH--------SHHHHHHHHHHHHHHCTCCEEEEEE
T ss_pred CEEEECCCC---CC--HHHHHHHHHHHHHCCCEEEEEecCCCCccch--------hHHHHHHHHHHHhhcCCCCcEEEEE
Confidence 489999974 33 2357899999999999999999999998843 2366667776533 23556899999
Q ss_pred echhHHHHHHHHHhcCCcCCccEEEEEccCCCcCCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 114 FSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
|||||.+++.++.+.+ +++++|+++|.+....+.....|+++++|++|+++|++....+.+.++
T Consensus 68 ~S~Gg~~a~~~~~~~~---~v~~~v~~~~~~~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~ 131 (145)
T PF12695_consen 68 HSMGGAIAANLAARNP---RVKAVVLLSPYPDSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP 131 (145)
T ss_dssp ETHHHHHHHHHHHHST---TESEEEEESESSGCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC
T ss_pred EccCcHHHHHHhhhcc---ceeEEEEecCccchhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC
Confidence 9999999999999874 599999999954433467788999999999999999999887766544
No 57
>PLN02578 hydrolase
Probab=99.49 E-value=3.8e-13 Score=154.28 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=75.4
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--CccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--SGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.|.|||+||++ ++. ..|..+...|++ +|+|+++|+||||.|++... +...+.+|+.++++.+. ..+++
T Consensus 86 g~~vvliHG~~---~~~--~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~----~~~~~ 155 (354)
T PLN02578 86 GLPIVLIHGFG---ASA--FHWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV----KEPAV 155 (354)
T ss_pred CCeEEEECCCC---CCH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc----cCCeE
Confidence 35689999974 332 357778888875 79999999999999986532 22334556666655543 34899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
++||||||.+++.+|.++|+ +++++|++++
T Consensus 156 lvG~S~Gg~ia~~~A~~~p~--~v~~lvLv~~ 185 (354)
T PLN02578 156 LVGNSLGGFTALSTAVGYPE--LVAGVALLNS 185 (354)
T ss_pred EEEECHHHHHHHHHHHhChH--hcceEEEECC
Confidence 99999999999999999998 7999998764
No 58
>KOG4391|consensus
Probab=99.49 E-value=2.3e-13 Score=140.35 Aligned_cols=200 Identities=21% Similarity=0.231 Sum_probs=145.1
Q ss_pred CCceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 2 ISNTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 2 ~m~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
.|+-+++++.++|. ++++++...+ ..+|+++++|+. +|++.+. ..-..-.+...+.+|+.+++||+|.|.
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~E-----~S~pTlLyfh~N---AGNmGhr-~~i~~~fy~~l~mnv~ivsYRGYG~S~ 121 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLSE-----SSRPTLLYFHAN---AGNMGHR-LPIARVFYVNLKMNVLIVSYRGYGKSE 121 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeeccc-----CCCceEEEEccC---CCcccch-hhHHHHHHHHcCceEEEEEeeccccCC
Confidence 46677889999887 7888877743 378999999996 5666542 222222345568999999999999999
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc------------
Q psy15208 81 GTYDSGNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------------ 146 (1027)
Q Consensus 81 g~~~~~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------------ 146 (1027)
|. ++.+++.-|.+++++++..+.. ..+++|.|.|.||++|..+|++..+ ++.++++-......
T Consensus 122 Gs-psE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--ri~~~ivENTF~SIp~~~i~~v~p~~ 198 (300)
T KOG4391|consen 122 GS-PSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--RISAIIVENTFLSIPHMAIPLVFPFP 198 (300)
T ss_pred CC-ccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--heeeeeeechhccchhhhhheeccch
Confidence 98 5778899999999999988643 4469999999999999999999877 78999987754221
Q ss_pred ------------C----CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceEeeccccCCCCcc-ccchhhhhhHHHH
Q psy15208 147 ------------W----LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIPESVSEGHPD-KIADQISDAILDE 209 (1027)
Q Consensus 147 ------------~----~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L~t~Esv~~GHPd-kvaDqIsdaILD~ 209 (1027)
| .+...+.|.|++-|.+|++|||-..+.+++..........+...-.|.| .++|.-.++|.|.
T Consensus 199 ~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dF 278 (300)
T KOG4391|consen 199 MKYIPLLCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDF 278 (300)
T ss_pred hhHHHHHHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHH
Confidence 1 1446679999999999999999999888775432211111111134554 4455555555554
Q ss_pred HHhh
Q psy15208 210 IFLK 213 (1027)
Q Consensus 210 ~L~~ 213 (1027)
+.+.
T Consensus 279 laE~ 282 (300)
T KOG4391|consen 279 LAEV 282 (300)
T ss_pred HHHh
Confidence 4433
No 59
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.49 E-value=2.1e-13 Score=142.04 Aligned_cols=166 Identities=21% Similarity=0.311 Sum_probs=124.6
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
...|||+||+ .|+.. -.+.++++|.++||.|++|.+||||..+..+ .+...+..|+....++|.+. +...|.
T Consensus 15 ~~AVLllHGF---TGt~~--Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~ 88 (243)
T COG1647 15 NRAVLLLHGF---TGTPR--DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIA 88 (243)
T ss_pred CEEEEEEecc---CCCcH--HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEE
Confidence 3678999998 44543 3788999999999999999999999988433 34567899999999999854 334699
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc--C-----------------------------------------
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK--W----------------------------------------- 147 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--~----------------------------------------- 147 (1027)
++|.||||.+++.+|.++| ++++|.++++... |
T Consensus 89 v~GlSmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~ 164 (243)
T COG1647 89 VVGLSMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTA 164 (243)
T ss_pred EEeecchhHHHHHHHhhCC----ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHH
Confidence 9999999999999999996 5899999886441 1
Q ss_pred -----------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC---CceEeeccccCCCCccccchhhhhhHHH
Q psy15208 148 -----------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD---IPVVVIPESVSEGHPDKIADQISDAILD 208 (1027)
Q Consensus 148 -----------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~---~~~L~t~Esv~~GHPdkvaDqIsdaILD 208 (1027)
.+..|..|++++.|.+|+.+|.+.+..+.+... ....+..++.+.-..|+-.+++.+.++.
T Consensus 165 ~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~ 239 (243)
T COG1647 165 QLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVIT 239 (243)
T ss_pred HHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHH
Confidence 156678999999999999999999986665432 2233444442222235555555555543
No 60
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.49 E-value=1.2e-12 Score=145.75 Aligned_cols=117 Identities=11% Similarity=0.149 Sum_probs=81.6
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccc
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNG 88 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~ 88 (1027)
.++..++++++... + ..|+|||+||++. ....|+.+.+.|.+ +|+|+++|+||||.|+... ....
T Consensus 18 ~~~~~~~~i~y~~~---G-----~~~~iv~lHG~~~-----~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~ 82 (286)
T PRK03204 18 WFDSSRGRIHYIDE---G-----TGPPILLCHGNPT-----WSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPS-GFGY 82 (286)
T ss_pred EEEcCCcEEEEEEC---C-----CCCEEEEECCCCc-----cHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCC-cccc
Confidence 35555556654432 2 2467999999742 22357788888865 6999999999999997532 1111
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 89 ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
...+....+..+....+..+++++||||||.+++.++..+|+ +++++|++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~ 134 (286)
T PRK03204 83 QIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERAD--RVRGVVLGNT 134 (286)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChh--heeEEEEECc
Confidence 233444434444444455689999999999999999999998 7999998764
No 61
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=99.47 E-value=8.7e-14 Score=157.02 Aligned_cols=126 Identities=20% Similarity=0.165 Sum_probs=98.1
Q ss_pred cccccccchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHH
Q psy15208 782 TKSKFDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861 (1027)
Q Consensus 782 ~K~~~dn~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e 861 (1027)
.|++....-..+++.|+. ....+..+.||||+|+|+|.||+.+|++|++|||+|+++|+...+.......++.+.++++
T Consensus 115 ~R~~~~~~~~~~~g~W~~-~~~~g~el~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~ 193 (324)
T COG0111 115 ARRIPDADASQRRGEWDR-KAFRGTELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDE 193 (324)
T ss_pred hcCchhhHHHHHcCCccc-cccccccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHH
Confidence 344444333456667765 3344668999999999999999999999999999999998754444333344445778999
Q ss_pred HhccCCEEEecCC----CcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 862 AKKYGDIFVTCTG----NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 862 ~l~~aDvvi~atG----~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+++||||+.++. |+++|+++.|++||+|++|||++... -+|.++|.
T Consensus 194 lL~~sDiv~lh~PlT~eT~g~i~~~~~a~MK~gailIN~aRG~-vVde~aL~ 244 (324)
T COG0111 194 LLAEADILTLHLPLTPETRGLINAEELAKMKPGAILINAARGG-VVDEDALL 244 (324)
T ss_pred HHhhCCEEEEcCCCCcchhcccCHHHHhhCCCCeEEEECCCcc-eecHHHHH
Confidence 9999999998654 67999999999999999999999984 35655555
No 62
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.47 E-value=4.2e-13 Score=153.45 Aligned_cols=99 Identities=23% Similarity=0.233 Sum_probs=74.0
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.|+|||+||++ ++.. .|..+.+.|.+ +|+|+++|+||||.|.... .+...++.++..++ ...+..+++
T Consensus 131 ~~~vl~~HG~~---~~~~--~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 200 (371)
T PRK14875 131 GTPVVLIHGFG---GDLN--NWLFNHAALAA-GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFL----DALGIERAH 200 (371)
T ss_pred CCeEEEECCCC---Cccc--hHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH----HhcCCccEE
Confidence 57899999974 3333 47778888876 6999999999999996432 23333344443333 344545799
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
|+||||||.+++.+|.++|+ +++++|+++|.
T Consensus 201 lvG~S~Gg~~a~~~a~~~~~--~v~~lv~~~~~ 231 (371)
T PRK14875 201 LVGHSMGGAVALRLAARAPQ--RVASLTLIAPA 231 (371)
T ss_pred EEeechHHHHHHHHHHhCch--heeEEEEECcC
Confidence 99999999999999999987 79999998864
No 63
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.46 E-value=3.6e-13 Score=144.42 Aligned_cols=99 Identities=17% Similarity=0.142 Sum_probs=74.0
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-CCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-DSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.|+|||+||++. +. ..|..+++.| + +|+|+++|+||||.|.... .+....+.|+.++++. .+..++++
T Consensus 2 ~p~vvllHG~~~---~~--~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~----~~~~~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLG---SG--QDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQS----YNILPYWL 70 (242)
T ss_pred CCEEEEECCCCC---Ch--HHHHHHHHHc-C-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHH----cCCCCeEE
Confidence 467999999843 32 3588888888 3 7999999999999997532 1333445555544443 34568999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+||||||.+++.+|.++|+. +++++++.++.
T Consensus 71 vG~S~Gg~va~~~a~~~~~~-~v~~lvl~~~~ 101 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAG-GLCGLIVEGGN 101 (242)
T ss_pred EEECHHHHHHHHHHHhCCcc-cccEEEEeCCC
Confidence 99999999999999999762 49999987643
No 64
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.44 E-value=2.4e-12 Score=144.56 Aligned_cols=120 Identities=18% Similarity=0.129 Sum_probs=77.3
Q ss_pred EEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCcc
Q psy15208 9 NINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGN 87 (1027)
Q Consensus 9 ~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~ 87 (1027)
.+...+| ++++..+.+++ .+.|||+||++..+ .. ..+...+...+|+|+++|+||||.|........
T Consensus 8 ~~~~~~~~~l~y~~~g~~~------~~~lvllHG~~~~~---~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~ 75 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNPD------GKPVVFLHGGPGSG---TD---PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEE 75 (306)
T ss_pred eEEcCCCcEEEEEECcCCC------CCEEEEECCCCCCC---CC---HHHHhccCccCCEEEEECCCCCCCCCCCCCccc
Confidence 3455555 56665543222 35689999974321 11 233444555689999999999999985422111
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
....|+...+..+....+..+++++||||||.+++.++.++|+ +++++|++++
T Consensus 76 ~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~ 128 (306)
T TIGR01249 76 NTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE--VVTGLVLRGI 128 (306)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH--hhhhheeecc
Confidence 1223333333333334445579999999999999999999998 6888888753
No 65
>PRK06489 hypothetical protein; Provisional
Probab=99.44 E-value=2.8e-12 Score=147.46 Aligned_cols=103 Identities=19% Similarity=0.161 Sum_probs=68.8
Q ss_pred ccEEEEECCCCCCCCCCChHHHH--HHHHHH-------HhCCcEEEEEcCCCCCCCCCCCCCc-----cchHHHH-HHHH
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQ--TLVRVM-------LSLGYISIRMNFRGVGASSGTYDSG-----NGETDDM-EILL 97 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~--~la~~L-------a~~Gy~Vla~DlrGhG~S~g~~~~~-----~~~~~Dv-~avl 97 (1027)
.|+|||+||++. +.. .|. .+.+.| ..++|+|+++|+||||.|+...... .....+. ..+.
T Consensus 69 gpplvllHG~~~---~~~--~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~ 143 (360)
T PRK06489 69 DNAVLVLHGTGG---SGK--SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQY 143 (360)
T ss_pred CCeEEEeCCCCC---chh--hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHH
Confidence 577999999843 221 232 454444 2458999999999999997432110 0112222 2333
Q ss_pred HHHHHhCCCCcEE-EEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 98 RYIQKKYPYLPII-LAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 98 ~~L~~~~~~~pvi-LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+.+....+..+++ |+||||||.+|+.++.++|+ +++++|++++
T Consensus 144 ~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~--~V~~LVLi~s 187 (360)
T PRK06489 144 RLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPD--FMDALMPMAS 187 (360)
T ss_pred HHHHHhcCCCceeEEEEECHHHHHHHHHHHhCch--hhheeeeecc
Confidence 4343444555664 89999999999999999999 7999998864
No 66
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.44 E-value=1.9e-12 Score=150.05 Aligned_cols=99 Identities=19% Similarity=0.215 Sum_probs=79.2
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC------CccchHHHHHHHHHHHHHhCCC
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD------SGNGETDDMEILLRYIQKKYPY 106 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~------~~~~~~~Dv~avl~~L~~~~~~ 106 (1027)
.|+|||+||++. +. ..|+.++..|++ +|+|+++|+||||.|+.... +...+++|+..+++.+. .
T Consensus 127 ~~~ivllHG~~~---~~--~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~----~ 196 (383)
T PLN03084 127 NPPVLLIHGFPS---QA--YSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK----S 196 (383)
T ss_pred CCeEEEECCCCC---CH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC----C
Confidence 578999999853 22 358889999975 89999999999999986421 33456677776666653 3
Q ss_pred CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.+++|+|||+||.+++.++.++|+ +++++|+++|+
T Consensus 197 ~~~~LvG~s~GG~ia~~~a~~~P~--~v~~lILi~~~ 231 (383)
T PLN03084 197 DKVSLVVQGYFSPPVVKYASAHPD--KIKKLILLNPP 231 (383)
T ss_pred CCceEEEECHHHHHHHHHHHhChH--hhcEEEEECCC
Confidence 479999999999999999999998 79999999865
No 67
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.44 E-value=1.1e-12 Score=139.67 Aligned_cols=153 Identities=12% Similarity=0.086 Sum_probs=107.6
Q ss_pred EEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--------CCccchHH
Q psy15208 20 AINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--------DSGNGETD 91 (1027)
Q Consensus 20 ~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--------~~~~~~~~ 91 (1027)
++|.|++. .++.|+||++||+++....... -..+.+.+.+.||.|+++|++|++.+...+ ........
T Consensus 2 ~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~~--~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~ 77 (212)
T TIGR01840 2 YVYVPAGL--TGPRALVLALHGCGQTASAYVI--DWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVE 77 (212)
T ss_pred EEEcCCCC--CCCCCEEEEeCCCCCCHHHHhh--hcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHH
Confidence 56778752 2468999999997543221110 013556666689999999999998654321 01124577
Q ss_pred HHHHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----------------------
Q psy15208 92 DMEILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---------------------- 147 (1027)
Q Consensus 92 Dv~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---------------------- 147 (1027)
|+..+++++...++. .+++|+||||||.+++.++.++|+ .+++++.+++.....
T Consensus 78 ~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (212)
T TIGR01840 78 SLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPD--VFAGGASNAGLPYGEASSSISATPQMCTAATAASVCR 155 (212)
T ss_pred HHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCch--hheEEEeecCCcccccccchhhHhhcCCCCCHHHHHH
Confidence 888899998887654 379999999999999999999998 688888777553110
Q ss_pred -------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 148 -------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 -------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
.......|++++||.+|.+||++.+..+.+.
T Consensus 156 ~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~ 193 (212)
T TIGR01840 156 LVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDA 193 (212)
T ss_pred HHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHH
Confidence 0111234567999999999999998866654
No 68
>PRK07581 hypothetical protein; Validated
Probab=99.43 E-value=2e-12 Score=147.11 Aligned_cols=103 Identities=18% Similarity=0.175 Sum_probs=72.7
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHH---HHHHhCCcEEEEEcCCCCCCCCCCCC-----Ccc-----chHHHHHHHHH
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLV---RVMLSLGYISIRMNFRGVGASSGTYD-----SGN-----GETDDMEILLR 98 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la---~~La~~Gy~Vla~DlrGhG~S~g~~~-----~~~-----~~~~Dv~avl~ 98 (1027)
..|+||++||+++ +.. .|..+. +.|...+|+|+++|+||||.|..... +.. ...+|+.+...
T Consensus 40 ~~~~vll~~~~~~---~~~--~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (339)
T PRK07581 40 KDNAILYPTWYSG---THQ--DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHR 114 (339)
T ss_pred CCCEEEEeCCCCC---Ccc--cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHH
Confidence 3467777787643 211 122222 36766789999999999999974321 111 25677777555
Q ss_pred HHHHhCCCCc-EEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 99 YIQKKYPYLP-IILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 99 ~L~~~~~~~p-viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
.+....+..+ ++|+||||||.+|+.+|.++|+ +++++|+++
T Consensus 115 ~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~--~V~~Lvli~ 156 (339)
T PRK07581 115 LLTEKFGIERLALVVGWSMGAQQTYHWAVRYPD--MVERAAPIA 156 (339)
T ss_pred HHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHH--HHhhheeee
Confidence 5555456667 5799999999999999999999 799999884
No 69
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.41 E-value=3e-12 Score=157.21 Aligned_cols=171 Identities=18% Similarity=0.249 Sum_probs=129.2
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+.+.+++.+| +++++++.|.+....+..|+||++||+++..-. ..+....+.|+.+||.|+.+++||.+.-...
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~---~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~ 440 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVG---YSFNPEIQVLASAGYAVLAPNYRGSTGYGRE 440 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccc---cccchhhHHHhcCCeEEEEeCCCCCCccHHH
Confidence 567789999999 999999999874333346999999998642211 2466788899999999999999987664321
Q ss_pred C------CCccchHHHHHHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC---------
Q psy15208 83 Y------DSGNGETDDMEILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK--------- 145 (1027)
Q Consensus 83 ~------~~~~~~~~Dv~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~--------- 145 (1027)
+ .......+|+.+.++++.+..-. .+++++|||+||.++++++.+.|. +++.+...+...
T Consensus 441 F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~---f~a~~~~~~~~~~~~~~~~~~ 517 (620)
T COG1506 441 FADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPR---FKAAVAVAGGVDWLLYFGEST 517 (620)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCch---hheEEeccCcchhhhhccccc
Confidence 1 12345789999999977654323 369999999999999999999874 666665554321
Q ss_pred -------------cC-------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 146 -------------KW-------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 146 -------------~~-------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
.+ ...++++|+|+|||++|..||.+++..+.+.++
T Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~ 578 (620)
T COG1506 518 EGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALK 578 (620)
T ss_pred hhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHH
Confidence 00 145788999999999999999999988776543
No 70
>KOG1454|consensus
Probab=99.40 E-value=7.5e-12 Score=142.06 Aligned_cols=104 Identities=21% Similarity=0.218 Sum_probs=74.7
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.++.||++|||+. +.. .|+.....|.+. |+.|+++|++|||.|+.......-.+.+....+..+-..+...+++
T Consensus 57 ~~~pvlllHGF~~---~~~--~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~ 131 (326)
T KOG1454|consen 57 DKPPVLLLHGFGA---SSF--SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVS 131 (326)
T ss_pred CCCcEEEeccccC---Ccc--cHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceE
Confidence 5788999999854 222 477777777665 5999999999999655432222122334334444444444555799
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEE---EEcc
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILI---LISV 142 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLV---li~p 142 (1027)
++||||||.+|+.+|+.+|+ .+++++ ++++
T Consensus 132 lvghS~Gg~va~~~Aa~~P~--~V~~lv~~~~~~~ 164 (326)
T KOG1454|consen 132 LVGHSLGGIVALKAAAYYPE--TVDSLVLLDLLGP 164 (326)
T ss_pred EEEeCcHHHHHHHHHHhCcc--cccceeeeccccc
Confidence 99999999999999999999 799999 6665
No 71
>PRK11071 esterase YqiA; Provisional
Probab=99.40 E-value=4.7e-12 Score=133.05 Aligned_cols=126 Identities=13% Similarity=0.132 Sum_probs=89.2
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
|.|||+||++ ++........+.+.|.++ +|+|+++|+|||+. ...+++ +.+....+..++++
T Consensus 2 p~illlHGf~---ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~~---------~~~~~l----~~l~~~~~~~~~~l 65 (190)
T PRK11071 2 STLLYLHGFN---SSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYPA---------DAAELL----ESLVLEHGGDPLGL 65 (190)
T ss_pred CeEEEECCCC---CCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCHH---------HHHHHH----HHHHHHcCCCCeEE
Confidence 5689999984 344332222456666553 79999999999841 233333 33434445568999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------------------C-------------CCCC--CCCcEE
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-------------------W-------------LIPE--VPKNTI 157 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-------------------~-------------~l~~--i~~PvL 157 (1027)
+||||||.+++.+|.++|. .+|+++|+..+ + .... .+.|++
T Consensus 66 vG~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~v~ 140 (190)
T PRK11071 66 VGSSLGGYYATWLSQCFML-----PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLESPDLIW 140 (190)
T ss_pred EEECHHHHHHHHHHHHcCC-----CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCChhhEE
Confidence 9999999999999999874 25778776442 1 0122 457788
Q ss_pred EEEeCCCCCCChHHHHhhhCCCC
Q psy15208 158 IIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 158 iIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
++||++|+++|++.+.++++...
T Consensus 141 iihg~~De~V~~~~a~~~~~~~~ 163 (190)
T PRK11071 141 LLQQTGDEVLDYRQAVAYYAACR 163 (190)
T ss_pred EEEeCCCCcCCHHHHHHHHHhcc
Confidence 99999999999999998888654
No 72
>KOG4178|consensus
Probab=99.39 E-value=8.1e-12 Score=138.05 Aligned_cols=100 Identities=22% Similarity=0.257 Sum_probs=84.9
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----CccchHHHHHHHHHHHHHhCCCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD----SGNGETDDMEILLRYIQKKYPYL 107 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~----~~~~~~~Dv~avl~~L~~~~~~~ 107 (1027)
..|+|+++||++.. +. .|+.....|+++||+|+++|+||+|.|+.... +...++.|+..+++.+. .+
T Consensus 43 ~gP~illlHGfPe~---wy--swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg----~~ 113 (322)
T KOG4178|consen 43 DGPIVLLLHGFPES---WY--SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG----LK 113 (322)
T ss_pred CCCEEEEEccCCcc---ch--hhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----cc
Confidence 47999999999753 22 48889999999999999999999999986542 33567888888888876 34
Q ss_pred cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+++++||++|+.+|+.++..+|+ +++++|+++.
T Consensus 114 k~~lvgHDwGaivaw~la~~~Pe--rv~~lv~~nv 146 (322)
T KOG4178|consen 114 KAFLVGHDWGAIVAWRLALFYPE--RVDGLVTLNV 146 (322)
T ss_pred eeEEEeccchhHHHHHHHHhChh--hcceEEEecC
Confidence 89999999999999999999999 8999998874
No 73
>KOG4667|consensus
Probab=99.39 E-value=6.1e-12 Score=130.19 Aligned_cols=172 Identities=20% Similarity=0.295 Sum_probs=125.7
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
...+.++...+ .+...+..- +...+||++||+ .++..+.....+|..|.+.||.++.+|++|.|.|++.+
T Consensus 10 ~~~ivi~n~~ne~lvg~lh~t------gs~e~vvlcHGf---rS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf 80 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLHET------GSTEIVVLCHGF---RSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSF 80 (269)
T ss_pred eeEEEeccCCCchhhcceecc------CCceEEEEeecc---ccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcc
Confidence 34455555544 333333222 345789999997 44555556778999999999999999999999999854
Q ss_pred --CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----------------
Q psy15208 84 --DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK---------------- 145 (1027)
Q Consensus 84 --~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~---------------- 145 (1027)
..+..+++|+..+++++....... -+++|||-||.+++.++.++++ ++-+|..++...
T Consensus 81 ~~Gn~~~eadDL~sV~q~~s~~nr~v-~vi~gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~~~I~eRlg~~~l~~ 156 (269)
T KOG4667|consen 81 YYGNYNTEADDLHSVIQYFSNSNRVV-PVILGHSKGGDVVLLYASKYHD---IRNVINCSGRYDLKNGINERLGEDYLER 156 (269)
T ss_pred ccCcccchHHHHHHHHHHhccCceEE-EEEEeecCccHHHHHHHHhhcC---chheEEcccccchhcchhhhhcccHHHH
Confidence 456678999999999998743222 4678999999999999999987 566666554210
Q ss_pred ------------------cC-----------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceEeeccc
Q psy15208 146 ------------------KW-----------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIPES 189 (1027)
Q Consensus 146 ------------------~~-----------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L~t~Es 189 (1027)
.| +--...||+|-+||..|.+||.+++..+++.+....+...|.
T Consensus 157 ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEg 235 (269)
T KOG4667|consen 157 IKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEG 235 (269)
T ss_pred HHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecC
Confidence 00 011346999999999999999999999998776555544444
No 74
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.38 E-value=2.5e-12 Score=146.79 Aligned_cols=84 Identities=18% Similarity=0.300 Sum_probs=63.2
Q ss_pred HHHHHHH---HHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHHhc
Q psy15208 53 VVQTLVR---VMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLP-IILAGFSFGTFVQAKLQKRL 128 (1027)
Q Consensus 53 ~~~~la~---~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~p-viLVGhSmGG~vAl~~A~~~ 128 (1027)
+|..+.. .|...+|+|+++|+||||.|.....+....++|+.++++.+ +..+ ++|+||||||.+++.+|.++
T Consensus 84 ~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l----~l~~~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 84 WWEGLVGSGRALDPARFRLLAFDFIGADGSLDVPIDTADQADAIALLLDAL----GIARLHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred cchhccCCCCccCccccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCcceEEEEECHHHHHHHHHHHHC
Confidence 4556664 46445899999999999988643223345666666666654 3324 57999999999999999999
Q ss_pred CCcCCccEEEEEcc
Q psy15208 129 DKEISIKILILISV 142 (1027)
Q Consensus 129 p~~~~V~gLVli~p 142 (1027)
|+ +++++|++++
T Consensus 160 P~--~V~~LvLi~s 171 (343)
T PRK08775 160 PA--RVRTLVVVSG 171 (343)
T ss_pred hH--hhheEEEECc
Confidence 99 7999998874
No 75
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.37 E-value=3.3e-11 Score=140.86 Aligned_cols=102 Identities=21% Similarity=0.231 Sum_probs=72.0
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccc--hHH-H-HHHHHHHHHHhCCCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNG--ETD-D-MEILLRYIQKKYPYL 107 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~--~~~-D-v~avl~~L~~~~~~~ 107 (1027)
.+|+|||+||++. +. ..|...+..|++ +|+|+++|+||||.|+........ ... . +..+.+++.. .+..
T Consensus 104 ~~p~vvllHG~~~---~~--~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~-l~~~ 176 (402)
T PLN02894 104 DAPTLVMVHGYGA---SQ--GFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA-KNLS 176 (402)
T ss_pred CCCEEEEECCCCc---ch--hHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH-cCCC
Confidence 4688999999743 22 246667788876 699999999999999753211111 111 1 1223333332 3445
Q ss_pred cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+++|+||||||.+++.++.++|+ +++++|+++|
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p~--~v~~lvl~~p 209 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHPE--HVQHLILVGP 209 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCch--hhcEEEEECC
Confidence 89999999999999999999998 7899998875
No 76
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.37 E-value=2e-12 Score=148.03 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=78.2
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCC---C---hHHHHHHH---HHHHhCCcEEEEEcCCC--CCCCCCC--
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTM---D---NKVVQTLV---RVMLSLGYISIRMNFRG--VGASSGT-- 82 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~---~---~~~~~~la---~~La~~Gy~Vla~DlrG--hG~S~g~-- 82 (1027)
++++..|.+.+ ....++|||+||++.+.-.. . ..+|..++ ..|...+|+|+++|+|| ||.|...
T Consensus 17 ~~~y~~~g~~~---~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 17 RVAYETYGTLN---AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred eEEEEeccccC---CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 67777776532 12357899999985421100 0 00355554 35656799999999999 5555421
Q ss_pred ------C------CCccchHHHHHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 83 ------Y------DSGNGETDDMEILLRYIQKKYPYLP-IILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 83 ------~------~~~~~~~~Dv~avl~~L~~~~~~~p-viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+ .+...+++|+.++++. .+..+ ++|+||||||.+++.++.++|+ +++++|++++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 161 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDH----LGIEQIAAVVGGSMGGMQALEWAIDYPE--RVRAIVVLATS 161 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHH----cCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEccC
Confidence 0 1123344555444443 34456 9999999999999999999998 78999988753
No 77
>PRK05855 short chain dehydrogenase; Validated
Probab=99.37 E-value=2.3e-11 Score=147.37 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=76.7
Q ss_pred EEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---
Q psy15208 7 FFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--- 83 (1027)
Q Consensus 7 ~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--- 83 (1027)
.+.+...+.+++++.+.+. ..|+|||+||++ ++. ..|..+.+.| ..||+|+++|+||||.|....
T Consensus 5 ~~~~~~~g~~l~~~~~g~~------~~~~ivllHG~~---~~~--~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~ 72 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP------DRPTVVLVHGYP---DNH--EVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTA 72 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC------CCCeEEEEcCCC---chH--HHHHHHHHHh-hcceEEEEecCCCCCCCCCCCccc
Confidence 3444444447877665432 257899999984 222 3588899999 568999999999999997532
Q ss_pred -CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHh
Q psy15208 84 -DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKR 127 (1027)
Q Consensus 84 -~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~ 127 (1027)
.+...+++|+..+++.+. ...|++|+||||||.+++.++.+
T Consensus 73 ~~~~~~~a~dl~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 73 AYTLARLADDFAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred ccCHHHHHHHHHHHHHHhC---CCCcEEEEecChHHHHHHHHHhC
Confidence 134567778777777653 23469999999999999888766
No 78
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=99.36 E-value=1.6e-12 Score=146.76 Aligned_cols=104 Identities=21% Similarity=0.273 Sum_probs=89.3
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccC
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
.+..+.|||++|+|+|.||+.+|+++++|||+|+.+++.+. .......+++..+++++++++|+|+.+++ +.++|
T Consensus 140 ~~~~l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLi 218 (324)
T COG1052 140 LGFDLRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLI 218 (324)
T ss_pred cccCCCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhc
Confidence 35578999999999999999999999999999999998886 44445566888889999999999987554 56999
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++.|++||+|++|||+|... -+|.+++.
T Consensus 219 n~~~l~~mk~ga~lVNtaRG~-~VDe~ALi 247 (324)
T COG1052 219 NAEELAKMKPGAILVNTARGG-LVDEQALI 247 (324)
T ss_pred CHHHHHhCCCCeEEEECCCcc-ccCHHHHH
Confidence 999999999999999999985 36666555
No 79
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.36 E-value=8.9e-12 Score=142.74 Aligned_cols=123 Identities=15% Similarity=0.040 Sum_probs=90.7
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchH-HHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET-DDME 94 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~-~Dv~ 94 (1027)
.+..+.|.|... ...+++||++||+..++-.++...++.++++|+++||+|+++|++|+|.|.... +..... .|+.
T Consensus 47 ~~~l~~~~~~~~--~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~-~~~d~~~~~~~ 123 (350)
T TIGR01836 47 KVVLYRYTPVKD--NTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL-TLDDYINGYID 123 (350)
T ss_pred cEEEEEecCCCC--cCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC-CHHHHHHHHHH
Confidence 445555666531 123445899999632211111123468999999999999999999999887543 333444 4588
Q ss_pred HHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 95 ILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 95 avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
++++++....+..+++++||||||.+++.++..+|+ +++++|+++++
T Consensus 124 ~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~--~v~~lv~~~~p 170 (350)
T TIGR01836 124 KCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPD--KIKNLVTMVTP 170 (350)
T ss_pred HHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCch--heeeEEEeccc
Confidence 889999888887899999999999999999999988 68999988864
No 80
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.32 E-value=1.8e-11 Score=140.32 Aligned_cols=166 Identities=18% Similarity=0.258 Sum_probs=114.5
Q ss_pred CceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 3 m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
...+++.|+-++++|.++++.|++ .++.|+||++-|. .+...+ .++.+.++|+.+|+.++++|.||.|.|...
T Consensus 163 ~~i~~v~iP~eg~~I~g~LhlP~~---~~p~P~VIv~gGl---Ds~qeD-~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~ 235 (411)
T PF06500_consen 163 YPIEEVEIPFEGKTIPGYLHLPSG---EKPYPTVIVCGGL---DSLQED-LYRLFRDYLAPRGIAMLTVDMPGQGESPKW 235 (411)
T ss_dssp SEEEEEEEEETTCEEEEEEEESSS---SS-EEEEEEE--T---TS-GGG-GHHHHHCCCHHCT-EEEEE--TTSGGGTTT
T ss_pred CCcEEEEEeeCCcEEEEEEEcCCC---CCCCCEEEEeCCc---chhHHH-HHHHHHHHHHhCCCEEEEEccCCCcccccC
Confidence 345678888888899999999986 4688998888885 333333 455666789999999999999999998743
Q ss_pred CCCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------------
Q psy15208 83 YDSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------- 147 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------- 147 (1027)
.-+.+. -.-..++++++.... +..+|.++|.||||.+|.++|..+++ +++++|..++.+..+
T Consensus 236 ~l~~D~-~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--RlkavV~~Ga~vh~~ft~~~~~~~~P~m 312 (411)
T PF06500_consen 236 PLTQDS-SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--RLKAVVALGAPVHHFFTDPEWQQRVPDM 312 (411)
T ss_dssp -S-S-C-CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT--T-SEEEEES---SCGGH-HHHHTTS-HH
T ss_pred CCCcCH-HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc--ceeeEeeeCchHhhhhccHHHHhcCCHH
Confidence 212111 122457888887753 23479999999999999999988877 799999999874422
Q ss_pred --------------------------------CC--CCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 148 --------------------------------LI--PEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 --------------------------------~l--~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
++ .++++|+|.+.|++|.++|.++.+.++..
T Consensus 313 y~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~ 377 (411)
T PF06500_consen 313 YLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAES 377 (411)
T ss_dssp HHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT
T ss_pred HHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhc
Confidence 13 56789999999999999999998866554
No 81
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=99.32 E-value=3.2e-12 Score=144.80 Aligned_cols=111 Identities=15% Similarity=0.134 Sum_probs=89.4
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHH-hCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMR-ALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~-~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+|+|+|+|.||+.+|++++ +|||+|+++++.+. .......|.+..++++++++||+|+.+++ +++++
T Consensus 140 g~~L~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~-~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li 218 (323)
T PRK15409 140 GTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHH-KEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLF 218 (323)
T ss_pred cCCCCCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCc-hhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhcc
Confidence 45799999999999999999999998 99999999976542 22234557777899999999999997653 66899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh-ccceeccc
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIK 917 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~ 917 (1027)
+++.|++||+|++|||+|.... +|.++|. .++...+.
T Consensus 219 ~~~~l~~mk~ga~lIN~aRG~v-Vde~AL~~AL~~g~i~ 256 (323)
T PRK15409 219 GAEQFAKMKSSAIFINAGRGPV-VDENALIAALQKGEIH 256 (323)
T ss_pred CHHHHhcCCCCeEEEECCCccc-cCHHHHHHHHHcCCee
Confidence 9999999999999999999853 5666665 33333443
No 82
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=99.32 E-value=4.7e-12 Score=142.88 Aligned_cols=99 Identities=27% Similarity=0.297 Sum_probs=84.7
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCcH
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVITH 881 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~~ 881 (1027)
..+.||||+|+|+|.||+.+|+++++|||+|+++|+.+.. ...++...++++++++||+|+.+++ ++++|++
T Consensus 141 ~~L~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~----~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~ 216 (311)
T PRK08410 141 GEIKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKN----KNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAY 216 (311)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCccc----cccCceeecHHHHhhcCCEEEEeCCCCchhhcccCH
Confidence 4689999999999999999999999999999999875421 1346777899999999999997654 6799999
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.|++||+|++|||+|... -+|.++|.
T Consensus 217 ~~~~~Mk~~a~lIN~aRG~-vVDe~AL~ 243 (311)
T PRK08410 217 KELKLLKDGAILINVGRGG-IVNEKDLA 243 (311)
T ss_pred HHHHhCCCCeEEEECCCcc-ccCHHHHH
Confidence 9999999999999999984 35666665
No 83
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.31 E-value=5.9e-11 Score=131.05 Aligned_cols=128 Identities=20% Similarity=0.395 Sum_probs=94.3
Q ss_pred EEEEecCCceEEEEEEe--cCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q psy15208 7 FFNINGSVGILHCAINF--PSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD 84 (1027)
Q Consensus 7 ~i~I~t~dG~I~~~l~~--P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~ 84 (1027)
+..+.+++|.....-|. |.. +..|.||++||. .|+..+.+.+.+++.+.++||.|+++++||++.+....+
T Consensus 51 re~v~~pdg~~~~ldw~~~p~~----~~~P~vVl~HGL---~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p 123 (345)
T COG0429 51 RERLETPDGGFIDLDWSEDPRA----AKKPLVVLFHGL---EGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP 123 (345)
T ss_pred eEEEEcCCCCEEEEeeccCccc----cCCceEEEEecc---CCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc
Confidence 34677888844333333 333 456899999998 455566688999999999999999999999999875322
Q ss_pred C--ccchHHHHHHHHHHHHHhCCCCcEEEEEechhH-HHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 85 S--GNGETDDMEILLRYIQKKYPYLPIILAGFSFGT-FVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 85 ~--~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG-~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
. -.+...|+..++++++..++..|+..+|.|+|| +++..++.. .+...+.+.+.++.
T Consensus 124 ~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgee-g~d~~~~aa~~vs~ 183 (345)
T COG0429 124 RLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEE-GDDLPLDAAVAVSA 183 (345)
T ss_pred ceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhh-ccCcccceeeeeeC
Confidence 2 235679999999999998888999999999999 455555544 44334555555553
No 84
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.30 E-value=1.5e-11 Score=142.65 Aligned_cols=119 Identities=15% Similarity=0.058 Sum_probs=75.7
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCCh--------HHHHHHH---HHHHhCCcEEEEEcCCCC-CCCCCCC
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDN--------KVVQTLV---RVMLSLGYISIRMNFRGV-GASSGTY 83 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~--------~~~~~la---~~La~~Gy~Vla~DlrGh-G~S~g~~ 83 (1027)
++++..+...+ ....|+|||+||++.+...+.. .+|..++ ..|...+|+|+++|++|+ |.|.+..
T Consensus 34 ~~~y~~~G~~~---~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 34 ELAYETYGTLN---ADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred eEEEEeccccC---CCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 45555554321 1235889999998543211100 0255554 234356899999999984 4443210
Q ss_pred ----------------CCccchHHHHHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 ----------------DSGNGETDDMEILLRYIQKKYPYLP-IILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ----------------~~~~~~~~Dv~avl~~L~~~~~~~p-viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.+...++.|+.++++.+ +..+ ++|+||||||.+++.+|.++|+ +++++|++++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 181 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDAL----GITRLAAVVGGSMGGMQALEWAIDYPD--RVRSALVIASS 181 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh----CCCCceEEEEECHHHHHHHHHHHhChH--hhhEEEEECCC
Confidence 12334555555555544 4446 5899999999999999999998 78999988753
No 85
>PRK06487 glycerate dehydrogenase; Provisional
Probab=99.27 E-value=7.1e-12 Score=141.76 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=85.1
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCcH
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVITH 881 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~~ 881 (1027)
..+.||+|+|+|+|.||+.+|+++++|||+|+++++.+. . ..++..++++++++||+|+.+++ |+++|++
T Consensus 144 ~~l~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~~~-~-----~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~ 217 (317)
T PRK06487 144 VELEGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLPGR-P-----ARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGA 217 (317)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCC-c-----ccccccCHHHHHHhCCEEEECCCCChHHhcCcCH
Confidence 468999999999999999999999999999999986531 1 12345689999999999997653 6799999
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhh-ccceecccc
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIKP 918 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~~ 918 (1027)
+.|++||+|++|||+|.... +|.++|. .+....+..
T Consensus 218 ~~~~~mk~ga~lIN~aRG~v-Vde~AL~~AL~~g~i~g 254 (317)
T PRK06487 218 RELALMKPGALLINTARGGL-VDEQALADALRSGHLGG 254 (317)
T ss_pred HHHhcCCCCeEEEECCCccc-cCHHHHHHHHHcCCeeE
Confidence 99999999999999999853 5666564 333334433
No 86
>PLN02928 oxidoreductase family protein
Probab=99.24 E-value=1.6e-11 Score=140.57 Aligned_cols=104 Identities=18% Similarity=0.241 Sum_probs=83.9
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH------------hhcCcEEcCHHHHhccCCEEEec
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA------------AMEGFLVVTMEYAKKYGDIFVTC 872 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A------------~~~G~~v~~~~e~l~~aDvvi~a 872 (1027)
+..+.||+|+|+|+|.||+.+|++|++|||+|+++|++..+.... ...+....+++++++++|+|+.+
T Consensus 154 ~~~l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 154 GDTLFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 456899999999999999999999999999999998764222111 01122556899999999999987
Q ss_pred CC----CcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 873 TG----NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 873 tG----~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++ +.++|+++.|+.||+|++|||+|... -+|.++|.
T Consensus 234 lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~-lVde~AL~ 273 (347)
T PLN02928 234 CTLTKETAGIVNDEFLSSMKKGALLVNIARGG-LLDYDAVL 273 (347)
T ss_pred CCCChHhhcccCHHHHhcCCCCeEEEECCCcc-ccCHHHHH
Confidence 64 67899999999999999999999984 35666664
No 87
>PRK11460 putative hydrolase; Provisional
Probab=99.24 E-value=1.6e-10 Score=125.17 Aligned_cols=141 Identities=15% Similarity=0.109 Sum_probs=93.5
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC---C-C-C----CCccc-------hHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS---G-T-Y----DSGNG-------ETDDME 94 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~---g-~-~----~~~~~-------~~~Dv~ 94 (1027)
+++|+|||+||++ ++.. .|..+++.|.+.++.+..++.+|...+. + . + .+... ....+.
T Consensus 14 ~~~~~vIlLHG~G---~~~~--~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 14 PAQQLLLLFHGVG---DNPV--AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CCCcEEEEEeCCC---CChH--HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHH
Confidence 4678999999974 3433 4778999998777666666666653221 0 0 0 01111 122233
Q ss_pred HHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-CCCCCCCcEEEEEeCCCCCCChHH
Q psy15208 95 ILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW-LIPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 95 avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~-~l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
+.++++..++. ..+++|+||||||.+++.++.++|+ .+.+++.+++..... .......|++++||++|+++|++.
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--~~~~vv~~sg~~~~~~~~~~~~~pvli~hG~~D~vvp~~~ 166 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--LAGRVIAFSGRYASLPETAPTATTIHLIHGGEDPVIDVAH 166 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--cceEEEEeccccccccccccCCCcEEEEecCCCCccCHHH
Confidence 34444444433 3479999999999999999998887 567788777654322 123457899999999999999999
Q ss_pred HHhhhCC
Q psy15208 172 VFLWANP 178 (1027)
Q Consensus 172 ~~~l~~~ 178 (1027)
+..+.+.
T Consensus 167 ~~~~~~~ 173 (232)
T PRK11460 167 AVAAQEA 173 (232)
T ss_pred HHHHHHH
Confidence 8766553
No 88
>PLN02872 triacylglycerol lipase
Probab=99.23 E-value=7.2e-11 Score=137.32 Aligned_cols=125 Identities=20% Similarity=0.117 Sum_probs=84.8
Q ss_pred ceEEEEEecCCceEEEEEEecCCcc--ccCCccEEEEECCCCCCCCCCC-hHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIK--LLKLKGVVLIAHPHPLFGGTMD-NKVVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~--~~~~~pvVVllHG~~~~gGs~~-~~~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
+.+++.+.++||.+-...+.|.... ....+|+|+|+||+...+..+. +..-+.++..|+++||+|+++|+||++.|.
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 4567889999996555555553210 1134688999999854333321 111245777899999999999999998764
Q ss_pred CCC-----------CCccchH-HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC
Q psy15208 81 GTY-----------DSGNGET-DDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK 130 (1027)
Q Consensus 81 g~~-----------~~~~~~~-~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~ 130 (1027)
+.. .++...+ .|+.++++++....+ .+++++||||||.+++.++ .+|+
T Consensus 123 gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~ 182 (395)
T PLN02872 123 GHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPN 182 (395)
T ss_pred CCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChH
Confidence 311 1233444 799999999976433 5899999999999998544 4454
No 89
>PRK06932 glycerate dehydrogenase; Provisional
Probab=99.23 E-value=2.7e-11 Score=136.87 Aligned_cols=98 Identities=19% Similarity=0.169 Sum_probs=81.3
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCcH
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVITH 881 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~~ 881 (1027)
..+.||+|+|+|+|.||+.+|+++++|||+|++++..+... ......++++++++||+|+.+++ |.++|++
T Consensus 143 ~~l~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~~-----~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~ 217 (314)
T PRK06932 143 TDVRGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGASV-----CREGYTPFEEVLKQADIVTLHCPLTETTQNLINA 217 (314)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCcccc-----cccccCCHHHHHHhCCEEEEcCCCChHHhcccCH
Confidence 36899999999999999999999999999999997643211 11224689999999999998654 6799999
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.|++||+|++|||+|... -+|.++|.
T Consensus 218 ~~l~~mk~ga~lIN~aRG~-~Vde~AL~ 244 (314)
T PRK06932 218 ETLALMKPTAFLINTGRGP-LVDEQALL 244 (314)
T ss_pred HHHHhCCCCeEEEECCCcc-ccCHHHHH
Confidence 9999999999999999984 35666665
No 90
>PLN00021 chlorophyllase
Probab=99.20 E-value=5.3e-10 Score=126.34 Aligned_cols=136 Identities=18% Similarity=0.186 Sum_probs=99.9
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEI 95 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~a 95 (1027)
.+.+.++.|.. .+..|+|||+||++.. +..|..++++|+++||.|+++|++|++.+.. .....|..+
T Consensus 38 ~~p~~v~~P~~---~g~~PvVv~lHG~~~~-----~~~y~~l~~~Las~G~~VvapD~~g~~~~~~-----~~~i~d~~~ 104 (313)
T PLN00021 38 PKPLLVATPSE---AGTYPVLLFLHGYLLY-----NSFYSQLLQHIASHGFIVVAPQLYTLAGPDG-----TDEIKDAAA 104 (313)
T ss_pred CceEEEEeCCC---CCCCCEEEEECCCCCC-----cccHHHHHHHHHhCCCEEEEecCCCcCCCCc-----hhhHHHHHH
Confidence 46777888865 3567999999998532 2357889999999999999999998653321 123566777
Q ss_pred HHHHHHHhC----------CCCcEEEEEechhHHHHHHHHHhcCCc---CCccEEEEEccCCCcC--------------C
Q psy15208 96 LLRYIQKKY----------PYLPIILAGFSFGTFVQAKLQKRLDKE---ISIKILILISVAVKKW--------------L 148 (1027)
Q Consensus 96 vl~~L~~~~----------~~~pviLVGhSmGG~vAl~~A~~~p~~---~~V~gLVli~p~~~~~--------------~ 148 (1027)
+++|+.... +..+++++||||||.+++.+|..+++. .+++++|.++|..... .
T Consensus 105 ~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p~il~~~~~ 184 (313)
T PLN00021 105 VINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPPPVLTYAPH 184 (313)
T ss_pred HHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCCcccccCcc
Confidence 777776521 224699999999999999999998752 2589999998853211 1
Q ss_pred CCCCCCcEEEEEeCCC
Q psy15208 149 IPEVPKNTIIIHGELD 164 (1027)
Q Consensus 149 l~~i~~PvLiIhG~~D 164 (1027)
...+..|++++++..|
T Consensus 185 s~~~~~P~liig~g~~ 200 (313)
T PLN00021 185 SFNLDIPVLVIGTGLG 200 (313)
T ss_pred cccCCCCeEEEecCCC
Confidence 2236699999999876
No 91
>PLN03139 formate dehydrogenase; Provisional
Probab=99.20 E-value=2.6e-11 Score=139.73 Aligned_cols=114 Identities=12% Similarity=0.132 Sum_probs=91.5
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+|+|+|+|.||+.+|+++++||++|+++|+++.........|+.. .+++++++++|+|+.+++ +.+++
T Consensus 194 ~~~L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li 273 (386)
T PLN03139 194 AYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMF 273 (386)
T ss_pred CcCCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHh
Confidence 4579999999999999999999999999999999988764444445567664 489999999999998765 56899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh-ccceeccccc
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIKPQ 919 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~~~ 919 (1027)
+++.|+.||+|+++||+|... -+|.+.|. .++...+...
T Consensus 274 ~~~~l~~mk~ga~lIN~aRG~-iVDe~AL~~AL~sG~l~GA 313 (386)
T PLN03139 274 NKERIAKMKKGVLIVNNARGA-IMDTQAVADACSSGHIGGY 313 (386)
T ss_pred CHHHHhhCCCCeEEEECCCCc-hhhHHHHHHHHHcCCceEE
Confidence 999999999999999999984 35666564 3344444433
No 92
>PLN02306 hydroxypyruvate reductase
Probab=99.20 E-value=2.7e-11 Score=139.95 Aligned_cols=104 Identities=20% Similarity=0.320 Sum_probs=82.2
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHH-hCCCEEEEEcCCchhHHHH--hhcC------------cE-EcCHHHHhccCCE
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMR-ALSAQVWIIEIDPICALQA--AMEG------------FL-VVTMEYAKKYGDI 868 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~-~~Ga~ViV~d~dp~r~~~A--~~~G------------~~-v~~~~e~l~~aDv 868 (1027)
+..+.||+|+|+|+|.||+.+|++++ +|||+|+++|+.+...... ...| +. ..++++++++||+
T Consensus 160 g~~L~gktvGIiG~G~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDi 239 (386)
T PLN02306 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADV 239 (386)
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCE
Confidence 45689999999999999999999985 9999999998775322111 1111 12 3489999999999
Q ss_pred EEecC----CCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 869 FVTCT----GNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 869 vi~at----G~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
|+.++ .+.++|+.+.|++||+|++|||+|.... +|.++|.
T Consensus 240 V~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~l-VDe~AL~ 283 (386)
T PLN02306 240 ISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPV-IDEVALV 283 (386)
T ss_pred EEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccc-cCHHHHH
Confidence 99854 3678999999999999999999999743 5655554
No 93
>PRK07574 formate dehydrogenase; Provisional
Probab=99.20 E-value=2.7e-11 Score=139.77 Aligned_cols=112 Identities=12% Similarity=0.175 Sum_probs=89.7
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.|++|+|+|+|.||+.+|++|++||++|+++|+.+.........|+. ..+++++++++|+|+.+++ +.+++
T Consensus 187 ~~~L~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 266 (385)
T PRK07574 187 SYDLEGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLF 266 (385)
T ss_pred ceecCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHh
Confidence 456899999999999999999999999999999999876433334455665 4689999999999998765 56899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh-ccceeccc
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIK 917 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~ 917 (1027)
+++.|+.||+|++|||+|.... +|.+.|. .++...+.
T Consensus 267 ~~~~l~~mk~ga~lIN~aRG~i-VDe~AL~~AL~sG~i~ 304 (385)
T PRK07574 267 DADVLSRMKRGSYLVNTARGKI-VDRDAVVRALESGHLA 304 (385)
T ss_pred CHHHHhcCCCCcEEEECCCCch-hhHHHHHHHHHhCCcc
Confidence 9999999999999999999843 4555554 33333343
No 94
>KOG1838|consensus
Probab=99.20 E-value=5.7e-10 Score=127.31 Aligned_cols=133 Identities=23% Similarity=0.281 Sum_probs=101.1
Q ss_pred EEEEEecCCc-eEEEEEEecCCcc---ccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIK---LLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~---~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
++..++.+|| .+..-+..+.... .....|+||++||.. +|+. ..+.+.++..+.++||+|+.++.||+|+|+-
T Consensus 94 ~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGlt--g~S~-~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~L 170 (409)
T KOG1838|consen 94 TREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLT--GGSH-ESYVRHLVHEAQRKGYRVVVFNHRGLGGSKL 170 (409)
T ss_pred eeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCC--CCCh-hHHHHHHHHHHHhCCcEEEEECCCCCCCCcc
Confidence 3456777777 5555454444321 124679999999984 3444 3678899999999999999999999999873
Q ss_pred CCCC--ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 82 TYDS--GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 82 ~~~~--~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
.-+. ..+...|+.+++++++.++|..|+..+|+||||.+-+.+..+..+..++.+.+.++
T Consensus 171 tTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~ 232 (409)
T KOG1838|consen 171 TTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVC 232 (409)
T ss_pred CCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEe
Confidence 2222 13578999999999999999999999999999999999998877755555555544
No 95
>KOG0068|consensus
Probab=99.19 E-value=3e-11 Score=132.28 Aligned_cols=114 Identities=17% Similarity=0.191 Sum_probs=93.3
Q ss_pred hhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEec
Q psy15208 793 RESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTC 872 (1027)
Q Consensus 793 ~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~a 872 (1027)
+++-|.... ..+.++.|||++|+|+|.||+.+|.+++++|++|+.+|.-.. ..++...|++.++++|++..||+|..+
T Consensus 130 k~g~wnr~~-~~G~el~GKTLgvlG~GrIGseVA~r~k~~gm~vI~~dpi~~-~~~~~a~gvq~vsl~Eil~~ADFitlH 207 (406)
T KOG0068|consen 130 KEGKWNRVK-YLGWELRGKTLGVLGLGRIGSEVAVRAKAMGMHVIGYDPITP-MALAEAFGVQLVSLEEILPKADFITLH 207 (406)
T ss_pred ecCceeecc-eeeeEEeccEEEEeecccchHHHHHHHHhcCceEEeecCCCc-hHHHHhccceeeeHHHHHhhcCEEEEc
Confidence 344453322 236689999999999999999999999999999999965432 445777899999999999999999765
Q ss_pred C----CCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 873 T----GNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 873 t----G~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+ .+.++++.+.|++||+|.++||+.... -+|.+.|.
T Consensus 208 ~PLtP~T~~lin~~tfA~mKkGVriIN~aRGG-vVDe~ALv 247 (406)
T KOG0068|consen 208 VPLTPSTEKLLNDETFAKMKKGVRIINVARGG-VVDEPALV 247 (406)
T ss_pred cCCCcchhhccCHHHHHHhhCCcEEEEecCCc-eechHHHH
Confidence 4 367899999999999999999999874 46666664
No 96
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.19 E-value=5.2e-10 Score=121.59 Aligned_cols=161 Identities=17% Similarity=0.179 Sum_probs=124.2
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCC-
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV-GASSGTY- 83 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh-G~S~g~~- 83 (1027)
+.+.+.++++.+.+++..|.+. .+.|.||++|+. .|-. ...+.+++.|+.+||.|++||+-+. |.+....
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~---~~~P~VIv~hei---~Gl~--~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~ 74 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGA---GGFPGVIVLHEI---FGLN--PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIED 74 (236)
T ss_pred cceEeeCCCceEeEEEecCCcC---CCCCEEEEEecc---cCCc--hHHHHHHHHHHhCCcEEEechhhccCCCCCcccc
Confidence 3467888889999999999872 344999999996 2332 3588999999999999999998654 3332110
Q ss_pred ------------CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-CC
Q psy15208 84 ------------DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-WL 148 (1027)
Q Consensus 84 ------------~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-~~ 148 (1027)
.+......|+.+.+++|..+. ...++.++|+||||.+++.++.+.|+ +++.+...+.... ..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~---v~a~v~fyg~~~~~~~ 151 (236)
T COG0412 75 EPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE---VKAAVAFYGGLIADDT 151 (236)
T ss_pred cHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC---ccEEEEecCCCCCCcc
Confidence 011456889999999998764 23469999999999999999998874 8888888765442 22
Q ss_pred --CCCCCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 149 --IPEVPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 149 --l~~i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
..++++|+++.+|..|..+|......+.+
T Consensus 152 ~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~ 182 (236)
T COG0412 152 ADAPKIKVPVLLHLAGEDPYIPAADVDALAA 182 (236)
T ss_pred cccccccCcEEEEecccCCCCChhHHHHHHH
Confidence 45889999999999999999987665544
No 97
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.19 E-value=5.5e-10 Score=150.04 Aligned_cols=99 Identities=22% Similarity=0.217 Sum_probs=74.5
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC----------CCccchHHHHHHHHHHHH
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY----------DSGNGETDDMEILLRYIQ 101 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~----------~~~~~~~~Dv~avl~~L~ 101 (1027)
..++|||+||++ ++.. .|..++..|.+ +|+|+++|+||||.|.... .+.+..++++..+++.+
T Consensus 1370 ~~~~vVllHG~~---~s~~--~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l- 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFL---GTGE--DWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI- 1442 (1655)
T ss_pred CCCeEEEECCCC---CCHH--HHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh-
Confidence 357899999984 3332 57888888875 6999999999999987431 11223444444444433
Q ss_pred HhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 102 KKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 102 ~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
...+++|+||||||.+++.++.++|+ +++++|++++
T Consensus 1443 ---~~~~v~LvGhSmGG~iAl~~A~~~P~--~V~~lVlis~ 1478 (1655)
T PLN02980 1443 ---TPGKVTLVGYSMGARIALYMALRFSD--KIEGAVIISG 1478 (1655)
T ss_pred ---CCCCEEEEEECHHHHHHHHHHHhChH--hhCEEEEECC
Confidence 44589999999999999999999998 7999998874
No 98
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=99.19 E-value=6.7e-11 Score=135.96 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=83.8
Q ss_pred hhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC-------
Q psy15208 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG------- 874 (1027)
Q Consensus 802 r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG------- 874 (1027)
|..+..+.||+|+|+|+|.||+.+|++|+++|++|+++|+ .+... .......++++++++||||+.++.
T Consensus 108 r~~g~~L~gktvGIIG~G~IG~~vA~~l~a~G~~V~~~dp--~~~~~--~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~ 183 (378)
T PRK15438 108 ERDGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDP--PRADR--GDEGDFRSLDELVQEADILTFHTPLFKDGPY 183 (378)
T ss_pred ccCCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECC--ccccc--ccccccCCHHHHHhhCCEEEEeCCCCCCccc
Confidence 3346679999999999999999999999999999999974 33221 122346789999999999986553
Q ss_pred -CcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 875 -NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 875 -~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.++++++.|+.||+|+++||+|.... +|.++|.
T Consensus 184 ~T~~li~~~~l~~mk~gailIN~aRG~v-VDe~AL~ 218 (378)
T PRK15438 184 KTLHLADEKLIRSLKPGAILINACRGAV-VDNTALL 218 (378)
T ss_pred ccccccCHHHHhcCCCCcEEEECCCchh-cCHHHHH
Confidence 678999999999999999999999853 5666664
No 99
>PLN02442 S-formylglutathione hydrolase
Probab=99.18 E-value=9.8e-10 Score=122.55 Aligned_cols=149 Identities=14% Similarity=0.120 Sum_probs=99.4
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHH-HHHHHHHHHhCCcEEEEEcCCCCCC-----CCC-------
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKV-VQTLVRVMLSLGYISIRMNFRGVGA-----SSG------- 81 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~-~~~la~~La~~Gy~Vla~DlrGhG~-----S~g------- 81 (1027)
..+.+.+|.|+.. ...+.|+|+|+||++ ++.++.. ...+.+.++..|+.|+.+|..++|. +..
T Consensus 30 ~~~~~~vy~P~~~-~~~~~Pvv~~lHG~~---~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~ 105 (283)
T PLN02442 30 CSMTFSVYFPPAS-DSGKVPVLYWLSGLT---CTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGA 105 (283)
T ss_pred CceEEEEEcCCcc-cCCCCCEEEEecCCC---cChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCc
Confidence 4788888888742 135689999999974 3332211 1234566777899999999987762 110
Q ss_pred -CC-----CC---c---cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---
Q psy15208 82 -TY-----DS---G---NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK--- 146 (1027)
Q Consensus 82 -~~-----~~---~---~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--- 146 (1027)
.+ .. . ....+++...++......+..+++++||||||..++.++.++|+ +++++++++|....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~--~~~~~~~~~~~~~~~~~ 183 (283)
T PLN02442 106 GFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD--KYKSVSAFAPIANPINC 183 (283)
T ss_pred ceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch--hEEEEEEECCccCcccC
Confidence 00 00 0 11233444444433323345679999999999999999999998 78889988876421
Q ss_pred -C--------------------------CCCCCCCcEEEEEeCCCCCCCh
Q psy15208 147 -W--------------------------LIPEVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 147 -~--------------------------~l~~i~~PvLiIhG~~D~iVP~ 169 (1027)
+ .......|++++||++|+++|.
T Consensus 184 ~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~ 233 (283)
T PLN02442 184 PWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKE 233 (283)
T ss_pred chhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccc
Confidence 1 0223578999999999999996
No 100
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=99.18 E-value=4.8e-11 Score=139.39 Aligned_cols=100 Identities=20% Similarity=0.297 Sum_probs=82.8
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+|+|+|+|.||+.+|+++++|||+|+++|+.+.. ...++. +.++++++++||+|+.+.+ +.+++
T Consensus 146 ~~~L~gktvGIiG~G~IG~~vA~~~~~fGm~V~~~d~~~~~----~~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li 221 (409)
T PRK11790 146 SFEVRGKTLGIVGYGHIGTQLSVLAESLGMRVYFYDIEDKL----PLGNARQVGSLEELLAQSDVVSLHVPETPSTKNMI 221 (409)
T ss_pred cccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCccc----ccCCceecCCHHHHHhhCCEEEEcCCCChHHhhcc
Confidence 45799999999999999999999999999999999875421 112344 4489999999999998654 66899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++.|++||+|++|+|+|... -+|.++|.
T Consensus 222 ~~~~l~~mk~ga~lIN~aRG~-~vde~aL~ 250 (409)
T PRK11790 222 GAEELALMKPGAILINASRGT-VVDIDALA 250 (409)
T ss_pred CHHHHhcCCCCeEEEECCCCc-ccCHHHHH
Confidence 999999999999999999974 35655554
No 101
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.17 E-value=7.1e-10 Score=132.82 Aligned_cols=123 Identities=19% Similarity=0.157 Sum_probs=85.4
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchH-HHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET-DDME 94 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~-~Dv~ 94 (1027)
.+..+.|.|... ...+++|||+||+....--++-..-++++++|.++||+|+++|++|+|.|..... ..... .++.
T Consensus 173 ~~eLi~Y~P~t~--~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~-~ddY~~~~i~ 249 (532)
T TIGR01838 173 LFQLIQYEPTTE--TVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT-FDDYIRDGVI 249 (532)
T ss_pred cEEEEEeCCCCC--cCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC-hhhhHHHHHH
Confidence 455666777652 1245678999997321111111112479999999999999999999998875432 33333 4577
Q ss_pred HHHHHHHHhCCCCcEEEEEechhHHHHH----HHHHhc-CCcCCccEEEEEccC
Q psy15208 95 ILLRYIQKKYPYLPIILAGFSFGTFVQA----KLQKRL-DKEISIKILILISVA 143 (1027)
Q Consensus 95 avl~~L~~~~~~~pviLVGhSmGG~vAl----~~A~~~-p~~~~V~gLVli~p~ 143 (1027)
+.++.+....+..+++++||||||.++. .++... ++ ++++++++++.
T Consensus 250 ~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~--rv~slvll~t~ 301 (532)
T TIGR01838 250 AALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDK--RIKSATFFTTL 301 (532)
T ss_pred HHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCC--ccceEEEEecC
Confidence 8888888777777899999999999852 244454 55 68999988863
No 102
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.16 E-value=2e-10 Score=122.62 Aligned_cols=149 Identities=15% Similarity=0.204 Sum_probs=101.9
Q ss_pred EEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCC-CCCCCCC----------
Q psy15208 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGA-SSGTYDS---------- 85 (1027)
Q Consensus 17 I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~-S~g~~~~---------- 85 (1027)
+.+++..|++ .++.|.||++|++ .|-. ...+.+++.|+++||.|++||+.+... .......
T Consensus 1 ~~ay~~~P~~---~~~~~~Vvv~~d~---~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~ 72 (218)
T PF01738_consen 1 IDAYVARPEG---GGPRPAVVVIHDI---FGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFA 72 (218)
T ss_dssp EEEEEEEETT---SSSEEEEEEE-BT---TBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHH
T ss_pred CeEEEEeCCC---CCCCCEEEEEcCC---CCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHh
Confidence 4578888987 2478999999986 2322 357789999999999999999854433 1211100
Q ss_pred --ccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC-CCc---CCCCCCCCcEE
Q psy15208 86 --GNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA-VKK---WLIPEVPKNTI 157 (1027)
Q Consensus 86 --~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~-~~~---~~l~~i~~PvL 157 (1027)
.+....|+.+.+++++.+. ...++.++|+|+||.+++.++.+.+ .+++.|...|. ... .....+++|++
T Consensus 73 ~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~---~~~a~v~~yg~~~~~~~~~~~~~~~~P~l 149 (218)
T PF01738_consen 73 PRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDP---RVDAAVSFYGGSPPPPPLEDAPKIKAPVL 149 (218)
T ss_dssp HSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTT---TSSEEEEES-SSSGGGHHHHGGG--S-EE
T ss_pred hhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhcc---ccceEEEEcCCCCCCcchhhhcccCCCEe
Confidence 1234677788899998875 3457999999999999999998873 48999998882 111 13667889999
Q ss_pred EEEeCCCCCCChHHHHhhh
Q psy15208 158 IIHGELDEIIPLKDVFLWA 176 (1027)
Q Consensus 158 iIhG~~D~iVP~~~~~~l~ 176 (1027)
+++|++|+.+|.+....+.
T Consensus 150 ~~~g~~D~~~~~~~~~~~~ 168 (218)
T PF01738_consen 150 ILFGENDPFFPPEEVEALE 168 (218)
T ss_dssp EEEETT-TTS-HHHHHHHH
T ss_pred ecCccCCCCCChHHHHHHH
Confidence 9999999999999765444
No 103
>PRK13243 glyoxylate reductase; Reviewed
Probab=99.16 E-value=1.2e-10 Score=132.71 Aligned_cols=103 Identities=19% Similarity=0.266 Sum_probs=87.1
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.||+|+|+|+|.||+.+|++++++|++|+++|+++... .+...|+...+++++++++|+|+.++. +.++++
T Consensus 145 g~~L~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~ 223 (333)
T PRK13243 145 GYDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMIN 223 (333)
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccC
Confidence 456899999999999999999999999999999999876433 344557777789999999999998765 468999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+.|+.||+|++++|+|.... +|.+.|.
T Consensus 224 ~~~~~~mk~ga~lIN~aRg~~-vd~~aL~ 251 (333)
T PRK13243 224 EERLKLMKPTAILVNTARGKV-VDTKALV 251 (333)
T ss_pred HHHHhcCCCCeEEEECcCchh-cCHHHHH
Confidence 999999999999999999843 4555554
No 104
>PRK06436 glycerate dehydrogenase; Provisional
Probab=99.14 E-value=1e-10 Score=131.36 Aligned_cols=98 Identities=15% Similarity=0.258 Sum_probs=82.0
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE--EcCHHHHhccCCEEEecCC----Cccc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL--VVTMEYAKKYGDIFVTCTG----NYHV 878 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~--v~~~~e~l~~aDvvi~atG----~~~v 878 (1027)
...+.||+|+|+|+|.||+.+|+++++||++|+++|+++.. .|+. ..+++++++++|+|+.+.+ +.++
T Consensus 117 ~~~L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~------~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~l 190 (303)
T PRK06436 117 TKLLYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN------DGISSIYMEPEDIMKKSDFVLISLPLTDETRGM 190 (303)
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc------cCcccccCCHHHHHhhCCEEEECCCCCchhhcC
Confidence 45799999999999999999999999999999999876432 2332 4579999999999998764 5689
Q ss_pred CcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.+.|+.||+|+++||+|.... +|.+.|.
T Consensus 191 i~~~~l~~mk~ga~lIN~sRG~~-vd~~aL~ 220 (303)
T PRK06436 191 INSKMLSLFRKGLAIINVARADV-VDKNDML 220 (303)
T ss_pred cCHHHHhcCCCCeEEEECCCccc-cCHHHHH
Confidence 99999999999999999999854 4555554
No 105
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.14 E-value=3.5e-10 Score=120.03 Aligned_cols=123 Identities=22% Similarity=0.318 Sum_probs=94.7
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCCCCCCCC------CCCccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHH
Q psy15208 54 VQTLVRVMLSLGYISIRMNFRGVGASSGT------YDSGNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQ 125 (1027)
Q Consensus 54 ~~~la~~La~~Gy~Vla~DlrGhG~S~g~------~~~~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A 125 (1027)
|....+.|+++||.|+.+|+||.+..... .......++|+..+++++..+.. ..++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 34567789999999999999998864321 11234579999999999988753 34699999999999999999
Q ss_pred HhcCCcCCccEEEEEccCCCcC----------------------------------CCCC--CCCcEEEEEeCCCCCCCh
Q psy15208 126 KRLDKEISIKILILISVAVKKW----------------------------------LIPE--VPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 126 ~~~p~~~~V~gLVli~p~~~~~----------------------------------~l~~--i~~PvLiIhG~~D~iVP~ 169 (1027)
.++|+ ++++++..+|..... .+.. +.+|+|++||++|..||+
T Consensus 83 ~~~~~--~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~ 160 (213)
T PF00326_consen 83 TQHPD--RFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPP 160 (213)
T ss_dssp HHTCC--GSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTT
T ss_pred cccce--eeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCH
Confidence 99998 789999998753210 1344 789999999999999999
Q ss_pred HHHHhhhCC
Q psy15208 170 KDVFLWANP 178 (1027)
Q Consensus 170 ~~~~~l~~~ 178 (1027)
+++..+++.
T Consensus 161 ~~s~~~~~~ 169 (213)
T PF00326_consen 161 SQSLRLYNA 169 (213)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998877654
No 106
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.12 E-value=2.4e-09 Score=121.40 Aligned_cols=166 Identities=16% Similarity=0.060 Sum_probs=113.6
Q ss_pred EEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCC-CCC--
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGA-SSG-- 81 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~-S~g-- 81 (1027)
..+.+.+.+| .++++++.|++. .++.|.||.+||.+ +... .+.... .++.+||.|+.+|.||+|. +..
T Consensus 57 y~v~f~s~~g~~V~g~l~~P~~~--~~~~Pavv~~hGyg---~~~~--~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~ 128 (320)
T PF05448_consen 57 YDVSFESFDGSRVYGWLYRPKNA--KGKLPAVVQFHGYG---GRSG--DPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYR 128 (320)
T ss_dssp EEEEEEEGGGEEEEEEEEEES-S--SSSEEEEEEE--TT-----GG--GHHHHH-HHHHTT-EEEEE--TTTSSSS-B-S
T ss_pred EEEEEEccCCCEEEEEEEecCCC--CCCcCEEEEecCCC---CCCC--Cccccc-ccccCCeEEEEecCCCCCCCCCCcc
Confidence 4577888777 899999999842 36789999999974 3322 232322 4678899999999999993 321
Q ss_pred ---------CC----CC------ccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEE
Q psy15208 82 ---------TY----DS------GNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILI 140 (1027)
Q Consensus 82 ---------~~----~~------~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli 140 (1027)
.. .+ +..+..|+...++++..... ..++.+.|.|+||.+++.+|+..| +|+++++.
T Consensus 129 ~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~---rv~~~~~~ 205 (320)
T PF05448_consen 129 GSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP---RVKAAAAD 205 (320)
T ss_dssp SBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS---T-SEEEEE
T ss_pred ccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc---cccEEEec
Confidence 00 01 12356888899999987643 347999999999999999999876 49999999
Q ss_pred ccCCCcC--------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhh
Q psy15208 141 SVAVKKW--------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWA 176 (1027)
Q Consensus 141 ~p~~~~~--------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~ 176 (1027)
.|....+ +.+++++|+++-.|..|+++||+.....+
T Consensus 206 vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~y 285 (320)
T PF05448_consen 206 VPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAY 285 (320)
T ss_dssp SESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHH
T ss_pred CCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHH
Confidence 8853211 26688999999999999999999999888
Q ss_pred CCCCCc
Q psy15208 177 NPLDIP 182 (1027)
Q Consensus 177 ~~~~~~ 182 (1027)
+.+...
T Consensus 286 N~i~~~ 291 (320)
T PF05448_consen 286 NAIPGP 291 (320)
T ss_dssp CC--SS
T ss_pred hccCCC
Confidence 877654
No 107
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.12 E-value=2.7e-10 Score=138.47 Aligned_cols=129 Identities=19% Similarity=0.134 Sum_probs=100.5
Q ss_pred ecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc-cc
Q psy15208 11 NGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSG-NG 88 (1027)
Q Consensus 11 ~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~-~~ 88 (1027)
+..|| +|++.++.|++ .++.|+||++||++........ .....+..|+++||.|+++|+||+|.|.+.+... ..
T Consensus 2 ~~~DG~~L~~~~~~P~~---~~~~P~Il~~~gyg~~~~~~~~-~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~ 77 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG---GGPVPVILSRTPYGKDAGLRWG-LDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSD 77 (550)
T ss_pred cCCCCCEEEEEEEecCC---CCCCCEEEEecCCCCchhhccc-cccccHHHHHhCCcEEEEEeccccccCCCceEecCcc
Confidence 45677 79999999976 2478999999998643210000 1123566788999999999999999999865333 56
Q ss_pred hHHHHHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 89 ETDDMEILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
..+|+..+++|+..+ ....+++++||||||.+++.+|..+|+ .+++++..++...
T Consensus 78 ~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--~l~aiv~~~~~~d 133 (550)
T TIGR00976 78 EAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--ALRAIAPQEGVWD 133 (550)
T ss_pred cchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--ceeEEeecCcccc
Confidence 899999999999876 233589999999999999999999887 7999998887654
No 108
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=99.10 E-value=5.9e-10 Score=124.50 Aligned_cols=149 Identities=18% Similarity=0.211 Sum_probs=113.0
Q ss_pred HHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEE
Q psy15208 757 GVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQV 836 (1027)
Q Consensus 757 G~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~V 836 (1027)
+-..+++++++ ..++|++.-+.. .--.-|...+.++.+...++..+..+.|++|+|+|+|.||+.+|+.|+++|++|
T Consensus 101 ~~~~l~~~a~~--~gi~v~~~~~~~-~va~~n~~~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~iG~avA~~L~~~G~~V 177 (287)
T TIGR02853 101 SNPYLEQLAAD--AGVKLIELFERD-DVAIYNSIPTAEGAIMMAIEHTDFTIHGSNVMVLGFGRTGMTIARTFSALGARV 177 (287)
T ss_pred CCHHHHHHHHH--CCCeEEEEEecc-ceEEEccHhHHHHHHHHHHHhcCCCCCCCEEEEEcChHHHHHHHHHHHHCCCEE
Confidence 33455544433 455666332210 001235567788888776666677899999999999999999999999999999
Q ss_pred EEEcCCchhHHHHhhcCcEEc---CHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 837 WIIEIDPICALQAAMEGFLVV---TMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 837 iV~d~dp~r~~~A~~~G~~v~---~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++++++.+...+...|+... ++.+.+.++|+||+|++.. +++.+.++.||++++++|++..+.+.|+...+
T Consensus 178 ~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~aDiVint~P~~-ii~~~~l~~~k~~aliIDlas~Pg~tdf~~Ak 252 (287)
T TIGR02853 178 FVGARSSADLARITEMGLIPFPLNKLEEKVAEIDIVINTIPAL-VLTADVLSKLPKHAVIIDLASKPGGTDFEYAK 252 (287)
T ss_pred EEEeCCHHHHHHHHHCCCeeecHHHHHHHhccCCEEEECCChH-HhCHHHHhcCCCCeEEEEeCcCCCCCCHHHHH
Confidence 999999877766777777654 3566788999999998654 67888899999999999999988888875443
No 109
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.10 E-value=2.5e-09 Score=118.68 Aligned_cols=158 Identities=13% Similarity=0.110 Sum_probs=97.7
Q ss_pred EEEEEecC--CceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHH-HhCCcEEEEEcC--CCCCCCC
Q psy15208 6 KFFNINGS--VGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVM-LSLGYISIRMNF--RGVGASS 80 (1027)
Q Consensus 6 ~~i~I~t~--dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~L-a~~Gy~Vla~Dl--rGhG~S~ 80 (1027)
+.+.+.+. +..+.+.+|.|++.. ..+.|+|+|+||++. +.....+......| .+.|+.|++||. +|+|.+.
T Consensus 14 ~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~~---~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 14 GFYRHKSETCGVPMTFGVFLPPQAA-AGPVPVLWYLSGLTC---THENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred EEEEEeccccCCceEEEEEcCCCcc-CCCCCEEEEccCCCC---CccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 33444443 336778889997521 245799999999743 33332222223334 456999999998 5555332
Q ss_pred C-----------CCCC--------ccchHHHH-HHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEE
Q psy15208 81 G-----------TYDS--------GNGETDDM-EILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILI 138 (1027)
Q Consensus 81 g-----------~~~~--------~~~~~~Dv-~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLV 138 (1027)
. .+.+ .......+ ..+...+...+ +..+++++||||||.+++.++.++|+ .+++++
T Consensus 90 ~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--~~~~~~ 167 (275)
T TIGR02821 90 EDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD--RFKSVS 167 (275)
T ss_pred CcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc--cceEEE
Confidence 1 0000 00112222 23333344433 33479999999999999999999998 789999
Q ss_pred EEccCCCcC---------------------------CCC--CCCCcEEEEEeCCCCCCCh
Q psy15208 139 LISVAVKKW---------------------------LIP--EVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 139 li~p~~~~~---------------------------~l~--~i~~PvLiIhG~~D~iVP~ 169 (1027)
+++|..... ... ....|+++.||+.|+.+|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~ 227 (275)
T TIGR02821 168 AFAPIVAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDE 227 (275)
T ss_pred EECCccCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCc
Confidence 888752110 001 2347888889999999998
No 110
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=99.10 E-value=1.1e-10 Score=131.58 Aligned_cols=112 Identities=11% Similarity=0.033 Sum_probs=85.1
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
...+.||||+|+|+|.||+.+|+++++||++|+++++.+........ -....+++++++++|+|+.+.+ +.++++
T Consensus 131 ~~~l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~-~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~ 209 (312)
T PRK15469 131 EYHREDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQS-FAGREELSAFLSQTRVLINLLPNTPETVGIIN 209 (312)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCcee-ecccccHHHHHhcCCEEEECCCCCHHHHHHhH
Confidence 34689999999999999999999999999999999876533211110 0123578999999999998764 568999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh-ccceecccc
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIKP 918 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~~ 918 (1027)
.+.|++||+|++|||+|.... +|.+.|. .+....+..
T Consensus 210 ~~~l~~mk~ga~lIN~aRG~v-Vde~aL~~aL~~g~i~g 247 (312)
T PRK15469 210 QQLLEQLPDGAYLLNLARGVH-VVEDDLLAALDSGKVKG 247 (312)
T ss_pred HHHHhcCCCCcEEEECCCccc-cCHHHHHHHHhcCCeee
Confidence 999999999999999999853 5655554 333334433
No 111
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=99.10 E-value=3.5e-10 Score=130.46 Aligned_cols=101 Identities=18% Similarity=0.206 Sum_probs=82.9
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC--------C
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG--------N 875 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG--------~ 875 (1027)
.+..+.||+|+|+|+|.||+.+|++++++|++|+++|+.. .. ...+....++++++++||+|+.+++ +
T Consensus 110 ~g~~l~gktvGIIG~G~IG~~va~~l~a~G~~V~~~Dp~~--~~--~~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~~T 185 (381)
T PRK00257 110 EGVDLAERTYGVVGAGHVGGRLVRVLRGLGWKVLVCDPPR--QE--AEGDGDFVSLERILEECDVISLHTPLTKEGEHPT 185 (381)
T ss_pred cCCCcCcCEEEEECCCHHHHHHHHHHHHCCCEEEEECCcc--cc--cccCccccCHHHHHhhCCEEEEeCcCCCCccccc
Confidence 3567899999999999999999999999999999997632 21 1223456789999999999987653 5
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.++++.+.|+.||+|++|||+|.... +|.++|.
T Consensus 186 ~~li~~~~l~~mk~gailIN~aRG~v-Vde~AL~ 218 (381)
T PRK00257 186 RHLLDEAFLASLRPGAWLINASRGAV-VDNQALR 218 (381)
T ss_pred cccCCHHHHhcCCCCeEEEECCCCcc-cCHHHHH
Confidence 68999999999999999999999854 5555554
No 112
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=99.09 E-value=2.5e-10 Score=137.58 Aligned_cols=112 Identities=19% Similarity=0.216 Sum_probs=89.6
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+|+|+|+|.||+.+|++|++||++|+++|+.. ....+...|+... +++++++++|+|+.+++ +.+++
T Consensus 133 g~~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 211 (525)
T TIGR01327 133 GTELYGKTLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYI-SPERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLI 211 (525)
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCC-ChhHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCc
Confidence 557999999999999999999999999999999998753 2233456677755 79999999999998664 57899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh-ccceecccc
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIKP 918 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~~ 918 (1027)
+.+.|+.||+|+++||+|.... +|.++|. .+....+..
T Consensus 212 ~~~~l~~mk~ga~lIN~aRG~~-vde~aL~~aL~~g~i~g 250 (525)
T TIGR01327 212 GAEELAKMKKGVIIVNCARGGI-IDEAALYEALEEGHVRA 250 (525)
T ss_pred CHHHHhcCCCCeEEEEcCCCce-eCHHHHHHHHHcCCeeE
Confidence 9999999999999999999853 5555554 333333433
No 113
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=99.09 E-value=2.5e-10 Score=137.64 Aligned_cols=113 Identities=21% Similarity=0.208 Sum_probs=91.1
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.||+|+|+|+|.||+.+|+++++||++|+++|+.+. ...+...|++..+++++++++|+|+.+++ +.++++
T Consensus 135 g~~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~ 213 (526)
T PRK13581 135 GVELYGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYIS-PERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIG 213 (526)
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCC-hhHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcC
Confidence 4578999999999999999999999999999999987543 23455678887799999999999998765 568999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh-ccceeccccc
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIKPQ 919 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~~~ 919 (1027)
.+.|+.||+|++++|+|.... +|.++|. .+....+...
T Consensus 214 ~~~l~~mk~ga~lIN~aRG~~-vde~aL~~aL~~g~i~gA 252 (526)
T PRK13581 214 AEELAKMKPGVRIINCARGGI-IDEAALAEALKSGKVAGA 252 (526)
T ss_pred HHHHhcCCCCeEEEECCCCce-eCHHHHHHHHhcCCeeEE
Confidence 999999999999999999853 4555554 3333344333
No 114
>PRK10162 acetyl esterase; Provisional
Probab=99.06 E-value=8.2e-09 Score=117.07 Aligned_cols=128 Identities=15% Similarity=0.223 Sum_probs=96.7
Q ss_pred eEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
.+.+.+.+++|.+.+.+|.|.. ...|+||++||+++..|+.+ .+..+.+.|+. .|+.|+.+|+|.....
T Consensus 57 ~~~~~i~~~~g~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~--~~~~~~~~la~~~g~~Vv~vdYrlape~---- 126 (318)
T PRK10162 57 TRAYMVPTPYGQVETRLYYPQP----DSQATLFYLHGGGFILGNLD--THDRIMRLLASYSGCTVIGIDYTLSPEA---- 126 (318)
T ss_pred EEEEEEecCCCceEEEEECCCC----CCCCEEEEEeCCcccCCCch--hhhHHHHHHHHHcCCEEEEecCCCCCCC----
Confidence 5567888888899999999964 34689999999887666654 35677888877 4999999999964332
Q ss_pred CCccchHHHHHHHHHHHHHh---CC--CCcEEEEEechhHHHHHHHHHhcCCc----CCccEEEEEccC
Q psy15208 84 DSGNGETDDMEILLRYIQKK---YP--YLPIILAGFSFGTFVQAKLQKRLDKE----ISIKILILISVA 143 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~---~~--~~pviLVGhSmGG~vAl~~A~~~p~~----~~V~gLVli~p~ 143 (1027)
.+.....|+.++++|+... ++ ..+++|+|+|+||.+++.++.+..+. .+++++++++|.
T Consensus 127 -~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 127 -RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred -CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 1233578888888888652 33 34799999999999999998764221 258889988774
No 115
>KOG4409|consensus
Probab=99.05 E-value=1.2e-09 Score=121.41 Aligned_cols=116 Identities=22% Similarity=0.194 Sum_probs=78.8
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCcc---chHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGN---GETDD 92 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~---~~~~D 92 (1027)
.+...-..+.. ..+..+||+||+|. |. ..|-.-.+.|+. .+.|+++|++|+|+|++...+.+ ....-
T Consensus 77 ~iw~~~~~~~~----~~~~plVliHGyGA--g~---g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~f 146 (365)
T KOG4409|consen 77 EIWTITVSNES----ANKTPLVLIHGYGA--GL---GLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEF 146 (365)
T ss_pred eeEEEeecccc----cCCCcEEEEeccch--hH---HHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHH
Confidence 44444444443 34566799999852 22 134444566766 89999999999999986432211 11122
Q ss_pred HHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 93 MEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 93 v~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
++.+-+| +...+..+.+|+||||||.+|..+|.+||+ +|..||+++|..
T Consensus 147 vesiE~W-R~~~~L~KmilvGHSfGGYLaa~YAlKyPe--rV~kLiLvsP~G 195 (365)
T KOG4409|consen 147 VESIEQW-RKKMGLEKMILVGHSFGGYLAAKYALKYPE--RVEKLILVSPWG 195 (365)
T ss_pred HHHHHHH-HHHcCCcceeEeeccchHHHHHHHHHhChH--hhceEEEecccc
Confidence 2222222 333456689999999999999999999999 799999999975
No 116
>KOG2564|consensus
Probab=99.04 E-value=1e-09 Score=117.94 Aligned_cols=125 Identities=18% Similarity=0.215 Sum_probs=91.2
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCC-
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGTY- 83 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~~- 83 (1027)
+.+.+.+.++++..|+..|.. ...|+++++||++.. . ..|..++..+..+ ..+|+++|+||||.+.-..
T Consensus 51 edv~i~~~~~t~n~Y~t~~~~----t~gpil~l~HG~G~S---~--LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e 121 (343)
T KOG2564|consen 51 EDVSIDGSDLTFNVYLTLPSA----TEGPILLLLHGGGSS---A--LSFAIFASELKSKIRCRCLALDLRGHGETKVENE 121 (343)
T ss_pred cccccCCCcceEEEEEecCCC----CCccEEEEeecCccc---c--hhHHHHHHHHHhhcceeEEEeeccccCccccCCh
Confidence 456677777788888888854 467999999996432 2 2477788877664 5678999999999987432
Q ss_pred --CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 84 --DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 84 --~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
-+.+.+..|+.++++.+-...+ .+++||||||||.+|...|...-- ..+.|+++++
T Consensus 122 ~dlS~eT~~KD~~~~i~~~fge~~-~~iilVGHSmGGaIav~~a~~k~l-psl~Gl~viD 179 (343)
T KOG2564|consen 122 DDLSLETMSKDFGAVIKELFGELP-PQIILVGHSMGGAIAVHTAASKTL-PSLAGLVVID 179 (343)
T ss_pred hhcCHHHHHHHHHHHHHHHhccCC-CceEEEeccccchhhhhhhhhhhc-hhhhceEEEE
Confidence 2346788898888877754322 369999999999999888765321 1378888877
No 117
>PRK10115 protease 2; Provisional
Probab=99.03 E-value=4.3e-09 Score=130.74 Aligned_cols=170 Identities=11% Similarity=0.021 Sum_probs=126.1
Q ss_pred ceEEEEEecCCc-eEEE-EEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHC-AINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~-~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
..+.+++++.|| +|++ +++.|... ..++.|+||++||... .+. ...|......|+++||.|+.+++||.|.-..
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~-~~~~~P~ll~~hGg~~--~~~-~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~ 490 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHF-RKGHNPLLVYGYGSYG--ASI-DADFSFSRLSLLDRGFVYAIVHVRGGGELGQ 490 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCC-CCCCCCEEEEEECCCC--CCC-CCCccHHHHHHHHCCcEEEEEEcCCCCccCH
Confidence 456788999999 8998 45555421 1246799999999643 222 2246666678889999999999999877653
Q ss_pred CC------CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------
Q psy15208 82 TY------DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------- 146 (1027)
Q Consensus 82 ~~------~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------- 146 (1027)
.+ ..-.....|+.+.+++|..+. ...++.+.|.|.||.++..++.++|+ +++++|+..|....
T Consensus 491 ~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--lf~A~v~~vp~~D~~~~~~~~ 568 (686)
T PRK10115 491 QWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE--LFHGVIAQVPFVDVVTTMLDE 568 (686)
T ss_pred HHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh--heeEEEecCCchhHhhhcccC
Confidence 22 112356899999999998763 23469999999999999999999999 78999988874220
Q ss_pred ----C--------------------------CCCCCCCc-EEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 147 ----W--------------------------LIPEVPKN-TIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 147 ----~--------------------------~l~~i~~P-vLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+ .+.++..| +|++||.+|.-||+.++.+|..++
T Consensus 569 ~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~L 632 (686)
T PRK10115 569 SIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKL 632 (686)
T ss_pred CCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHH
Confidence 0 14456778 567799999999999988776643
No 118
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.03 E-value=7.9e-10 Score=116.20 Aligned_cols=122 Identities=25% Similarity=0.328 Sum_probs=95.8
Q ss_pred cEEEEEcCCCCCCCCC--CCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 66 YISIRMNFRGVGASSG--TYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 66 y~Vla~DlrGhG~S~g--~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
|+|+++|+||+|.|+. ..........|+.+.++.+.+..+..+++++||||||.+++.++..+|+ +++++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE--RVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG--GEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch--hhcCcEEEeee
Confidence 7899999999999995 1222233467777777777777777789999999999999999999999 89999999984
Q ss_pred --CC---------c-C----------------------------------------------------------------
Q psy15208 144 --VK---------K-W---------------------------------------------------------------- 147 (1027)
Q Consensus 144 --~~---------~-~---------------------------------------------------------------- 147 (1027)
.. . .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNA 158 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccc
Confidence 00 0 0
Q ss_pred -----------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceEeeccc
Q psy15208 148 -----------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIPES 189 (1027)
Q Consensus 148 -----------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L~t~Es 189 (1027)
.+..+.+|+++++|+.|.++|+.....+.+..........+.
T Consensus 159 ~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~ 211 (230)
T PF00561_consen 159 LGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEG 211 (230)
T ss_dssp HHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETT
T ss_pred ccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCC
Confidence 156789999999999999999999988766555544444443
No 119
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.01 E-value=3.7e-09 Score=113.37 Aligned_cols=191 Identities=19% Similarity=0.127 Sum_probs=135.8
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC--
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG-- 81 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g-- 81 (1027)
.-++++++.+| +|++++..|... .++.|.||-.||++..+|. |..+.. ++..||.|+.+|.||.|.|+.
T Consensus 56 ~ydvTf~g~~g~rI~gwlvlP~~~--~~~~P~vV~fhGY~g~~g~-----~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt 127 (321)
T COG3458 56 VYDVTFTGYGGARIKGWLVLPRHE--KGKLPAVVQFHGYGGRGGE-----WHDMLH-WAVAGYAVFVMDVRGQGSSSQDT 127 (321)
T ss_pred EEEEEEeccCCceEEEEEEeeccc--CCccceEEEEeeccCCCCC-----cccccc-ccccceeEEEEecccCCCccccC
Confidence 34577888777 999999999862 2678999999998543221 222222 346799999999999998842
Q ss_pred --CC-C-C-----------------ccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEE
Q psy15208 82 --TY-D-S-----------------GNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILI 138 (1027)
Q Consensus 82 --~~-~-~-----------------~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLV 138 (1027)
.+ . + +.....|+..+++.+....+ ..++.+.|.|+||.+++.++...| ++++++
T Consensus 128 ~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~---rik~~~ 204 (321)
T COG3458 128 ADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP---RIKAVV 204 (321)
T ss_pred CCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh---hhhccc
Confidence 10 0 0 12457788888887776433 347999999999999999998876 489999
Q ss_pred EEccCCCcC----------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 139 LISVAVKKW----------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 139 li~p~~~~~----------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
+.-|....+ +..+++.|+|+.-|..|+++||+.....++.
T Consensus 205 ~~~Pfl~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~ 284 (321)
T COG3458 205 ADYPFLSDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNA 284 (321)
T ss_pred ccccccccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhc
Confidence 888865432 1567899999999999999999999887776
Q ss_pred CCCce--EeeccccCCCCccccchhhhhhH
Q psy15208 179 LDIPV--VVIPESVSEGHPDKIADQISDAI 206 (1027)
Q Consensus 179 ~~~~~--L~t~Esv~~GHPdkvaDqIsdaI 206 (1027)
+..+. -..+...+++.|.-..+++..++
T Consensus 285 l~~~K~i~iy~~~aHe~~p~~~~~~~~~~l 314 (321)
T COG3458 285 LTTSKTIEIYPYFAHEGGPGFQSRQQVHFL 314 (321)
T ss_pred ccCCceEEEeeccccccCcchhHHHHHHHH
Confidence 54332 22333334566665555555444
No 120
>KOG2382|consensus
Probab=98.99 E-value=6.9e-09 Score=115.14 Aligned_cols=105 Identities=17% Similarity=0.221 Sum_probs=85.4
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCC-CCccchHHHHHHHHHHHHHhCCCCc
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGTY-DSGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~~-~~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
...|+++++||+ -|+..| |+.++..|+.. +..|+++|.|.||.|+... .+...+++|+..+++.....+...+
T Consensus 50 ~~~Pp~i~lHGl---~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~ 124 (315)
T KOG2382|consen 50 ERAPPAIILHGL---LGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDP 124 (315)
T ss_pred CCCCceEEeccc---ccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCC
Confidence 467889999997 566665 88999999875 7899999999999998532 3456789999999998875545568
Q ss_pred EEEEEechhH-HHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 109 IILAGFSFGT-FVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 109 viLVGhSmGG-~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+.++|||||| .+++..+...|+ .+..+|+...
T Consensus 125 ~~l~GHsmGG~~~~m~~t~~~p~--~~~rliv~D~ 157 (315)
T KOG2382|consen 125 VVLLGHSMGGVKVAMAETLKKPD--LIERLIVEDI 157 (315)
T ss_pred ceecccCcchHHHHHHHHHhcCc--ccceeEEEec
Confidence 9999999999 888888899998 5777776653
No 121
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.99 E-value=1.9e-08 Score=100.23 Aligned_cols=158 Identities=20% Similarity=0.263 Sum_probs=111.4
Q ss_pred EEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC---CCCCCc-cchHHHHHHH
Q psy15208 21 INFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS---GTYDSG-NGETDDMEIL 96 (1027)
Q Consensus 21 l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~---g~~~~~-~~~~~Dv~av 96 (1027)
++.|.+ .+..+||+.||. ++++++......+..|+.+|+.|..|+++=.-... +.+++. ...-......
T Consensus 6 ~~~pag----~~~~tilLaHGA---GasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~ 78 (213)
T COG3571 6 LFDPAG----PAPVTILLAHGA---GASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVA 78 (213)
T ss_pred ccCCCC----CCCEEEEEecCC---CCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHH
Confidence 445554 355678999996 67888888889999999999999999996332211 112222 2222333445
Q ss_pred HHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---------CCCCCCCcEEEEEeCCCCCC
Q psy15208 97 LRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---------LIPEVPKNTIIIHGELDEII 167 (1027)
Q Consensus 97 l~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---------~l~~i~~PvLiIhG~~D~iV 167 (1027)
+.++.......|+++-|+||||.++.+++....- .|+++++++-++.+. .+..++.|++|.||+.|++-
T Consensus 79 ~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A--~i~~L~clgYPfhppGKPe~~Rt~HL~gl~tPtli~qGtrD~fG 156 (213)
T COG3571 79 IAQLRAGLAEGPLIIGGKSMGGRVASMVADELQA--PIDGLVCLGYPFHPPGKPEQLRTEHLTGLKTPTLITQGTRDEFG 156 (213)
T ss_pred HHHHHhcccCCceeeccccccchHHHHHHHhhcC--CcceEEEecCccCCCCCcccchhhhccCCCCCeEEeeccccccc
Confidence 5566666566689999999999999999987755 689999998543211 36778999999999999999
Q ss_pred ChHHHHhhhCCCCCceEeec
Q psy15208 168 PLKDVFLWANPLDIPVVVIP 187 (1027)
Q Consensus 168 P~~~~~~l~~~~~~~~L~t~ 187 (1027)
..+.+..+.-..+...+...
T Consensus 157 tr~~Va~y~ls~~iev~wl~ 176 (213)
T COG3571 157 TRDEVAGYALSDPIEVVWLE 176 (213)
T ss_pred CHHHHHhhhcCCceEEEEec
Confidence 88887655444333344333
No 122
>KOG0069|consensus
Probab=98.97 E-value=1.1e-09 Score=122.76 Aligned_cols=96 Identities=21% Similarity=0.252 Sum_probs=85.2
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.||+|+|+|+|.||+.+|++|++||+.+..+.+.+.+...+...+.+..++++.+.++|+||.|.. +.++++
T Consensus 157 g~~~~gK~vgilG~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~liN 236 (336)
T KOG0069|consen 157 GYDLEGKTVGILGLGRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLIN 236 (336)
T ss_pred cccccCCEEEEecCcHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHhh
Confidence 4468999999999999999999999999977777777787788887788888999999999999987653 568999
Q ss_pred HHHHhcCCCCeEEEEecCCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d 900 (1027)
++.|+.||+|++|+|++...
T Consensus 237 k~~~~~mk~g~vlVN~aRG~ 256 (336)
T KOG0069|consen 237 KKFIEKMKDGAVLVNTARGA 256 (336)
T ss_pred HHHHHhcCCCeEEEeccccc
Confidence 99999999999999999984
No 123
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.97 E-value=1.4e-08 Score=108.60 Aligned_cols=140 Identities=18% Similarity=0.119 Sum_probs=77.4
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHH-HHHhCCcEEEEEcCCC------CCC---CCCCC----CCccchHHH----
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVR-VMLSLGYISIRMNFRG------VGA---SSGTY----DSGNGETDD---- 92 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~-~La~~Gy~Vla~DlrG------hG~---S~g~~----~~~~~~~~D---- 92 (1027)
+..++|||+||+|++. + .+..+.. .+......++.++-|- .|. +.... ........+
T Consensus 12 ~~~~lvi~LHG~G~~~----~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s 86 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSE----D-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEES 86 (216)
T ss_dssp T-SEEEEEE--TTS-H----H-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHH
T ss_pred CCceEEEEECCCCCCc----c-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHH
Confidence 5789999999985422 1 2333333 2233467788776642 233 21110 111011222
Q ss_pred ---HHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC-----CCC-CCCcEEEEEeC
Q psy15208 93 ---MEILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL-----IPE-VPKNTIIIHGE 162 (1027)
Q Consensus 93 ---v~avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~-----l~~-i~~PvLiIhG~ 162 (1027)
+..+++...+. .+..+++|.|+|+||.+|+.++.++|. .+.++|.+++..+... ... -..|++++||.
T Consensus 87 ~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi~~~hG~ 164 (216)
T PF02230_consen 87 AERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--PLAGVVALSGYLPPESELEDRPEALAKTPILIIHGD 164 (216)
T ss_dssp HHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--TSSEEEEES---TTGCCCHCCHCCCCTS-EEEEEET
T ss_pred HHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--CcCEEEEeeccccccccccccccccCCCcEEEEecC
Confidence 22333322222 244579999999999999999999998 7999999998754321 111 26899999999
Q ss_pred CCCCCChHHHHhhhC
Q psy15208 163 LDEIIPLKDVFLWAN 177 (1027)
Q Consensus 163 ~D~iVP~~~~~~l~~ 177 (1027)
+|+++|.+.+....+
T Consensus 165 ~D~vvp~~~~~~~~~ 179 (216)
T PF02230_consen 165 EDPVVPFEWAEKTAE 179 (216)
T ss_dssp T-SSSTHHHHHHHHH
T ss_pred CCCcccHHHHHHHHH
Confidence 999999988764443
No 124
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=98.95 E-value=1.5e-09 Score=123.57 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=82.7
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCC----cccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGN----YHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~----~~vi 879 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++...... .. ..+++++++++|+|+.+++. .+++
T Consensus 141 ~~~l~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~----~~~~~~l~ell~~aDiVil~lP~t~~t~~li 216 (330)
T PRK12480 141 SKPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF----LTYKDSVKEAIKDADIISLHVPANKESYHLF 216 (330)
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh----hhccCCHHHHHhcCCEEEEeCCCcHHHHHHH
Confidence 456899999999999999999999999999999999887433211 12 34789999999999987763 4789
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.+.|+.||+|+++||+|... .+|.+.|.
T Consensus 217 ~~~~l~~mk~gavlIN~aRG~-~vd~~aL~ 245 (330)
T PRK12480 217 DKAMFDHVKKGAILVNAARGA-VINTPDLI 245 (330)
T ss_pred hHHHHhcCCCCcEEEEcCCcc-ccCHHHHH
Confidence 999999999999999999984 45666665
No 125
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.93 E-value=7.3e-09 Score=116.32 Aligned_cols=117 Identities=18% Similarity=0.210 Sum_probs=94.1
Q ss_pred cchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC---HHHHhc
Q psy15208 788 NLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT---MEYAKK 864 (1027)
Q Consensus 788 n~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~---~~e~l~ 864 (1027)
|...+.++.+....+..+..+.|++|+|+|+|.+|+.+++.|+.+|++|+++++++.+..++...|++... +.+.+.
T Consensus 130 ns~~~aegav~~a~~~~~~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~ 209 (296)
T PRK08306 130 NSIPTAEGAIMMAIEHTPITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVG 209 (296)
T ss_pred ccHhHHHHHHHHHHHhCCCCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhC
Confidence 44444555443333334556899999999999999999999999999999999999888888888987654 556778
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccch
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEV 905 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~ 905 (1027)
++|+||+|++. .+++++.++.|++++++++++..+...|+
T Consensus 210 ~aDiVI~t~p~-~~i~~~~l~~~~~g~vIIDla~~pggtd~ 249 (296)
T PRK08306 210 KIDIIFNTIPA-LVLTKEVLSKMPPEALIIDLASKPGGTDF 249 (296)
T ss_pred CCCEEEECCCh-hhhhHHHHHcCCCCcEEEEEccCCCCcCe
Confidence 99999999865 46888999999999999999987655554
No 126
>KOG0024|consensus
Probab=98.92 E-value=2e-09 Score=118.29 Aligned_cols=161 Identities=17% Similarity=0.160 Sum_probs=124.4
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcC-------HHHH---h--
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVT-------MEYA---K-- 863 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~-------~~e~---l-- 863 (1027)
|.+..+. + .-.|.+|+|+|+|+||......|+++|| +|+++|.++.|.+.|+..|+++.. .++. +
T Consensus 159 ~HAcr~~-~-vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~ 236 (354)
T KOG0024|consen 159 VHACRRA-G-VKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEK 236 (354)
T ss_pred hhhhhhc-C-cccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHh
Confidence 4554443 4 3579999999999999999999999999 899999999999999999998543 1221 1
Q ss_pred ----ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhccceeccccceeeeecCC-CcEEEEecCCc
Q psy15208 864 ----KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHIIFPD-GKKIILLAEGR 938 (1027)
Q Consensus 864 ----~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~~~~~~~~~~v~~y~~~d-g~~i~LLa~Gr 938 (1027)
...|+.|+|+|....++.. +..+|.++.++-+|....+++++.+....++.....+.+|...+ ..+|.++++|+
T Consensus 237 ~~g~~~~d~~~dCsG~~~~~~aa-i~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGk 315 (354)
T KOG0024|consen 237 ALGKKQPDVTFDCSGAEVTIRAA-IKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGK 315 (354)
T ss_pred hccccCCCeEEEccCchHHHHHH-HHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCC
Confidence 1379999999988766654 88899999999999888888888665432333333345665433 67999999999
Q ss_pred cccccCCCCCCcceEehhhHhHHHHHHHHh
Q psy15208 939 LVNLGCGTGHPSYVMSSSFANQTLAQIELF 968 (1027)
Q Consensus 939 lvNl~~~~G~P~~vmd~sf~~q~la~~~l~ 968 (1027)
+ ++...+++.|.+..+..+|-.
T Consensus 316 i--------~~k~lIT~r~~~~~~~eAf~~ 337 (354)
T KOG0024|consen 316 I--------DVKPLITHRYKFDDADEAFET 337 (354)
T ss_pred c--------CchhheecccccchHHHHHHH
Confidence 9 788888999987777666654
No 127
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.92 E-value=2.5e-09 Score=96.60 Aligned_cols=73 Identities=27% Similarity=0.348 Sum_probs=60.9
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---CCccchHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---DSGNGETDD 92 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~~~~~~~~D 92 (1027)
+|++..|.|++ +++++|+++||++.+++ +|..+++.|+++||.|+++|+||||.|++.. ++++..++|
T Consensus 3 ~L~~~~w~p~~----~~k~~v~i~HG~~eh~~-----ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D 73 (79)
T PF12146_consen 3 KLFYRRWKPEN----PPKAVVVIVHGFGEHSG-----RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDD 73 (79)
T ss_pred EEEEEEecCCC----CCCEEEEEeCCcHHHHH-----HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHH
Confidence 68899999987 36899999999866543 5889999999999999999999999998643 456677888
Q ss_pred HHHHH
Q psy15208 93 MEILL 97 (1027)
Q Consensus 93 v~avl 97 (1027)
+..++
T Consensus 74 ~~~~~ 78 (79)
T PF12146_consen 74 LHQFI 78 (79)
T ss_pred HHHHh
Confidence 77665
No 128
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=98.91 E-value=4e-09 Score=117.73 Aligned_cols=94 Identities=20% Similarity=0.304 Sum_probs=82.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC---CcccCcHHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG---NYHVITHDH 883 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG---~~~vi~~~~ 883 (1027)
.|.||+|+|||||.||+.+|++|+++|++|++++..+.....+...|+++.+++++++.+|+|+.+++ +.++++.+.
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~ei 92 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAEV 92 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHHH
Confidence 48999999999999999999999999999999976544445677789998999999999999998775 357888888
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
++.||+|++|+....|+
T Consensus 93 l~~MK~GaiL~f~hgfn 109 (335)
T PRK13403 93 EENLREGQMLLFSHGFN 109 (335)
T ss_pred HhcCCCCCEEEECCCcc
Confidence 99999999999887775
No 129
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.90 E-value=1.4e-08 Score=108.88 Aligned_cols=155 Identities=13% Similarity=0.145 Sum_probs=101.4
Q ss_pred EEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-------CCccchH
Q psy15208 18 HCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-------DSGNGET 90 (1027)
Q Consensus 18 ~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-------~~~~~~~ 90 (1027)
.+.+|.|++.+ ..+.|+||++||.++.+..+. ....|.+.-.++||.|+.|+........+.+ .......
T Consensus 2 ~Y~lYvP~~~~-~~~~PLVv~LHG~~~~a~~~~--~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~ 78 (220)
T PF10503_consen 2 SYRLYVPPGAP-RGPVPLVVVLHGCGQSAEDFA--AGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDV 78 (220)
T ss_pred cEEEecCCCCC-CCCCCEEEEeCCCCCCHHHHH--hhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccch
Confidence 46788888632 236799999999754322111 1112333233469999999975322211111 1123456
Q ss_pred HHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-C---------------C----
Q psy15208 91 DDMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-W---------------L---- 148 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-~---------------~---- 148 (1027)
..+..+++++..+++.+ +|++.|+|.||.++..++..+|+ .+.++...++.+.. . .
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd--~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~~ 156 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD--LFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPAA 156 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc--cceEEEeecccccccccCcccHHHHhhCCCCCChHH
Confidence 67788888888887654 69999999999999999999999 78887777643210 0 0
Q ss_pred -------C-CCCCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 149 -------I-PEVPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 149 -------l-~~i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
. ..-..|++++||+.|..|.+.+.....+
T Consensus 157 ~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~ 193 (220)
T PF10503_consen 157 AWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVA 193 (220)
T ss_pred HHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHH
Confidence 0 0112589999999999999988765544
No 130
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.88 E-value=1.6e-08 Score=118.29 Aligned_cols=112 Identities=14% Similarity=0.213 Sum_probs=82.2
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHh--CCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHh--CC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS--LGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKK--YP 105 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~--~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~--~~ 105 (1027)
.+|++|++|||... +.+.+ +...+.+.|.. ..|+|+++|++|||.|.... ........++..++++|... .+
T Consensus 40 ~~ptvIlIHG~~~s-~~~~~-w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 40 ETKTFIVIHGWTVT-GMFES-WVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCeEEEECCCCcC-Ccchh-hHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 57899999998542 22221 22236665542 26999999999999876321 11234567788888888653 34
Q ss_pred CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC
Q psy15208 106 YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW 147 (1027)
Q Consensus 106 ~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~ 147 (1027)
..+++|+||||||.+|..++.++|+ ++.++++++|+.+.|
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~--rV~rItgLDPAgP~F 157 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKH--KVNRITGLDPAGPTF 157 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCc--ceeEEEEEcCCCCcc
Confidence 5689999999999999999999887 799999999987655
No 131
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.87 E-value=2.2e-08 Score=110.86 Aligned_cols=122 Identities=21% Similarity=0.233 Sum_probs=89.5
Q ss_pred Cc-eEEEEEEec--CCccccCCccEEEEECCCCCCCCCCChH-HHH-H------HHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 14 VG-ILHCAINFP--SSIKLLKLKGVVLIAHPHPLFGGTMDNK-VVQ-T------LVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 14 dG-~I~~~l~~P--~~~~~~~~~pvVVllHG~~~~gGs~~~~-~~~-~------la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
|| +|.+.+|.| .. .++.|+||..|+++. ..... ... . ....|+++||.|+..|.||+|.|.|.
T Consensus 1 DGv~L~adv~~P~~~~---~~~~P~il~~tpY~~---~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~ 74 (272)
T PF02129_consen 1 DGVRLAADVYRPGADG---GGPFPVILTRTPYGK---GDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGE 74 (272)
T ss_dssp TS-EEEEEEEEE--TT---SSSEEEEEEEESSTC---TC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-
T ss_pred CCCEEEEEEEecCCCC---CCcccEEEEccCcCC---CCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCc
Confidence 45 789999999 43 478999999999842 21010 010 0 11238999999999999999999998
Q ss_pred CCC-ccchHHHHHHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 83 YDS-GNGETDDMEILLRYIQKKY-PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 83 ~~~-~~~~~~Dv~avl~~L~~~~-~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+.. .....+|...+++|+..+. ...+|.++|.|++|..++.+|...|. .+++++...+.
T Consensus 75 ~~~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p--~LkAi~p~~~~ 135 (272)
T PF02129_consen 75 FDPMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPP--HLKAIVPQSGW 135 (272)
T ss_dssp B-TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-T--TEEEEEEESE-
T ss_pred cccCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCC--CceEEEecccC
Confidence 765 7789999999999998872 12369999999999999999997777 68999988753
No 132
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.86 E-value=4.5e-08 Score=126.97 Aligned_cols=123 Identities=15% Similarity=0.168 Sum_probs=76.0
Q ss_pred ceEEEEEEecCCccc--cCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CccchHH
Q psy15208 15 GILHCAINFPSSIKL--LKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD-SGNGETD 91 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~--~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~-~~~~~~~ 91 (1027)
+.+..+.|.|..... ....++|||+||+....-.++...-+++.+.|.++||+|+++|+ |.|..... ....+.+
T Consensus 47 ~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~ 123 (994)
T PRK07868 47 PMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLAD 123 (994)
T ss_pred CcEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHH
Confidence 345666777764210 12457889999985432222211112358899999999999995 55443211 1234556
Q ss_pred HHHHHHHHHHH--hCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 92 DMEILLRYIQK--KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 92 Dv~avl~~L~~--~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
++..+.+.+.. .....+++|+||||||.+++.+++.+++. +++++|+++
T Consensus 124 ~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~-~v~~lvl~~ 174 (994)
T PRK07868 124 HVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSK-DIASIVTFG 174 (994)
T ss_pred HHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCC-ccceEEEEe
Confidence 65555555532 11234799999999999999998765432 688888743
No 133
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.86 E-value=1.1e-08 Score=113.81 Aligned_cols=109 Identities=16% Similarity=0.203 Sum_probs=79.7
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHH-hCCcEEEEEcCCCCCCCCCCCC----CccchHHHHHHHHHHHHHh--C
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGYISIRMNFRGVGASSGTYD----SGNGETDDMEILLRYIQKK--Y 104 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy~Vla~DlrGhG~S~g~~~----~~~~~~~Dv~avl~~L~~~--~ 104 (1027)
.+|++|++|||.. +....+...+++.|. ..+|+|+++|+++++.+. +. +.....+++..+++++.+. .
T Consensus 35 ~~p~vilIHG~~~---~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~~~~~~v~~~la~~l~~L~~~~g~ 109 (275)
T cd00707 35 SRPTRFIIHGWTS---SGEESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAVNNTRVVGAELAKFLDFLVDNTGL 109 (275)
T ss_pred CCCcEEEEcCCCC---CCCCcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHHHhHHHHHHHHHHHHHHHHHhcCC
Confidence 4788999999854 332223445665554 458999999999873322 21 1233456778888888765 3
Q ss_pred CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC
Q psy15208 105 PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW 147 (1027)
Q Consensus 105 ~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~ 147 (1027)
+..+++|+||||||.+|..++.++|+ ++++++.++|+.+.+
T Consensus 110 ~~~~i~lIGhSlGa~vAg~~a~~~~~--~v~~iv~LDPa~p~f 150 (275)
T cd00707 110 SLENVHLIGHSLGAHVAGFAGKRLNG--KLGRITGLDPAGPLF 150 (275)
T ss_pred ChHHEEEEEecHHHHHHHHHHHHhcC--ccceeEEecCCcccc
Confidence 44579999999999999999999988 799999999987644
No 134
>PRK08605 D-lactate dehydrogenase; Validated
Probab=98.86 E-value=5.1e-09 Score=119.46 Aligned_cols=101 Identities=19% Similarity=0.171 Sum_probs=81.7
Q ss_pred CccccCCEEEEEcCChhHHHHHHHH-HhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCC----Cccc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAM-RALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTG----NYHV 878 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a-~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG----~~~v 878 (1027)
+..+.|++|+|+|+|.||+.+|+++ +++|++|+++|+++..... .+++. .+++++++++|+|+.+++ +.++
T Consensus 141 ~~~l~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~~~---~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~l 217 (332)
T PRK08605 141 SRSIKDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAKAA---TYVDYKDTIEEAVEGADIVTLHMPATKYNHYL 217 (332)
T ss_pred cceeCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccHhHH---hhccccCCHHHHHHhCCEEEEeCCCCcchhhh
Confidence 4568999999999999999999999 7899999999887643321 23343 479999999999998765 3578
Q ss_pred CcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.+.++.||+|++++|++... .+|...+.
T Consensus 218 i~~~~l~~mk~gailIN~sRG~-~vd~~aL~ 247 (332)
T PRK08605 218 FNADLFKHFKKGAVFVNCARGS-LVDTKALL 247 (332)
T ss_pred cCHHHHhcCCCCcEEEECCCCc-ccCHHHHH
Confidence 8888899999999999999974 44555554
No 135
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=98.78 E-value=1.3e-08 Score=117.08 Aligned_cols=150 Identities=17% Similarity=0.229 Sum_probs=109.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhh-cCcEEc-CHHH--------Hh---ccCCEEEecC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAM-EGFLVV-TMEY--------AK---KYGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~-~G~~v~-~~~e--------~l---~~aDvvi~at 873 (1027)
..+.+|+|+|+|+||...++.++.+|+ +|+++|.++.|+..|.. .|.++. +..+ .+ ..+|++|+|+
T Consensus 167 ~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~ 246 (350)
T COG1063 167 RPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAV 246 (350)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECC
Confidence 345599999999999999999999998 79999999999999987 777633 2211 11 1489999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCCcc---cchhhhhccceeccccc--eeeeecCCCcEEEEecCCccccccCCCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFDNE---IEVEKLKKYKWENIKPQ--VDHIIFPDGKKIILLAEGRLVNLGCGTGH 948 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d~e---id~~~l~~~~~~~~~~~--v~~y~~~dg~~i~LLa~GrlvNl~~~~G~ 948 (1027)
|+...+. +.++.+++++.++.+|.+..+ ++...+...+....... ...+.+ ...+.+|++|++ .
T Consensus 247 G~~~~~~-~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~--~~~~~ll~~g~i--------~ 315 (350)
T COG1063 247 GSPPALD-QALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDF--ERALDLLASGKI--------D 315 (350)
T ss_pred CCHHHHH-HHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccH--HHHHHHHHcCCC--------C
Confidence 9877555 459999999999999998444 33433333333333331 122333 368899999999 7
Q ss_pred CcceEehhhHhHHHHHHHHh
Q psy15208 949 PSYVMSSSFANQTLAQIELF 968 (1027)
Q Consensus 949 P~~vmd~sf~~q~la~~~l~ 968 (1027)
|..+.++.+.+..++..|-.
T Consensus 316 ~~~lit~~~~~~~~~~a~~~ 335 (350)
T COG1063 316 PEKLITHRLPLDDAAEAYEL 335 (350)
T ss_pred hhHceEeeccHHHHHHHHHH
Confidence 77788888887666665544
No 136
>KOG2984|consensus
Probab=98.76 E-value=1.6e-08 Score=104.16 Aligned_cols=167 Identities=18% Similarity=0.247 Sum_probs=109.2
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHH-HhCCcEEEEEcCCCCCCCCCCCCC--ccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVM-LSLGYISIRMNFRGVGASSGTYDS--GNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~L-a~~Gy~Vla~DlrGhG~S~g~~~~--~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
..|+++.|. .++.+.+ |......| -..-+.++++|-||+|.|...... .+-...|.+..++.++.. ...|+.
T Consensus 43 ~~iLlipGa--lGs~~tD--f~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fs 117 (277)
T KOG2984|consen 43 NYILLIPGA--LGSYKTD--FPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFS 117 (277)
T ss_pred ceeEecccc--ccccccc--CCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCee
Confidence 456788885 2333333 44333333 333489999999999999854322 233566666666665543 344899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----------------cC---------------------------
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK----------------KW--------------------------- 147 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~----------------~~--------------------------- 147 (1027)
++|+|-||..++.+|+++++ .|..+|.++.... .|
T Consensus 118 vlGWSdGgiTalivAak~~e--~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~ 195 (277)
T KOG2984|consen 118 VLGWSDGGITALIVAAKGKE--KVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDV 195 (277)
T ss_pred EeeecCCCeEEEEeeccChh--hhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHH
Confidence 99999999999999999998 7999999986411 11
Q ss_pred ---------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE-eeccccCCCCccccchhhhhhHHH
Q psy15208 148 ---------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV-VIPESVSEGHPDKIADQISDAILD 208 (1027)
Q Consensus 148 ---------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L-~t~Esv~~GHPdkvaDqIsdaILD 208 (1027)
.+++++||++|+||..|++++..++--+........+ ..++. .+...-+.+++...-++|
T Consensus 196 v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peG-kHn~hLrya~eFnklv~d 271 (277)
T KOG2984|consen 196 VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEG-KHNFHLRYAKEFNKLVLD 271 (277)
T ss_pred HHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCC-CcceeeechHHHHHHHHH
Confidence 2788999999999999999998776544443333333 22332 222234555555544444
No 137
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.71 E-value=2.9e-08 Score=102.81 Aligned_cols=133 Identities=17% Similarity=0.240 Sum_probs=87.9
Q ss_pred EEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC--CCCcEEEEE
Q psy15208 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKY--PYLPIILAG 113 (1027)
Q Consensus 36 VVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~--~~~pviLVG 113 (1027)
|+++||+ +++...+++..|.+.|... ++|-.+|+ ..+ +....++.+.+.. ...+++|||
T Consensus 1 v~IvhG~---~~s~~~HW~~wl~~~l~~~-~~V~~~~~--------~~P-------~~~~W~~~l~~~i~~~~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGY---GGSPPDHWQPWLERQLENS-VRVEQPDW--------DNP-------DLDEWVQALDQAIDAIDEPTILVA 61 (171)
T ss_dssp EEEE--T---TSSTTTSTHHHHHHHHTTS-EEEEEC----------TS---------HHHHHHHHHHCCHC-TTTEEEEE
T ss_pred CEEeCCC---CCCCccHHHHHHHHhCCCC-eEEecccc--------CCC-------CHHHHHHHHHHHHhhcCCCeEEEE
Confidence 6899998 4444444666677788765 77777666 112 2444555555432 234699999
Q ss_pred echhHHHHHHHHH-hcCCcCCccEEEEEccCCCc----C----------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 114 FSFGTFVQAKLQK-RLDKEISIKILILISVAVKK----W----------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 114 hSmGG~vAl~~A~-~~p~~~~V~gLVli~p~~~~----~----------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
||+|+..++.+++ ..+. +++|+++++|+-.. + ....+..|.+++.+++|+++|++.+..+++.
T Consensus 62 HSLGc~~~l~~l~~~~~~--~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~ 139 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQK--KVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQR 139 (171)
T ss_dssp ETHHHHHHHHHHHHTCCS--SEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHH
T ss_pred eCHHHHHHHHHHhhcccc--cccEEEEEcCCCcccccchhhhccccccCcccccCCCeEEEEcCCCCccCHHHHHHHHHH
Confidence 9999999999994 4444 89999999987542 1 1223347889999999999999999999999
Q ss_pred CCCceEeeccc
Q psy15208 179 LDIPVVVIPES 189 (1027)
Q Consensus 179 ~~~~~L~t~Es 189 (1027)
+...++..++.
T Consensus 140 l~a~~~~~~~~ 150 (171)
T PF06821_consen 140 LGAELIILGGG 150 (171)
T ss_dssp HT-EEEEETS-
T ss_pred cCCCeEECCCC
Confidence 88777766653
No 138
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=98.69 E-value=4.7e-08 Score=116.49 Aligned_cols=92 Identities=23% Similarity=0.247 Sum_probs=78.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc--CH-H--------------H---------
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV--TM-E--------------Y--------- 861 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~--~~-~--------------e--------- 861 (1027)
..|++|+|+|+|+||+..++.++.+||+|+++|+++.|+.++...|.+.. +. + +
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~ 242 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALF 242 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999998732 11 0 1
Q ss_pred --HhccCCEEEecCCCc-----ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 862 --AKKYGDIFVTCTGNY-----HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 862 --~l~~aDvvi~atG~~-----~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.+.++|++|+|+|.+ .++.++.++.||+|++++++|..
T Consensus 243 ~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 243 AEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence 124699999999863 36678999999999999999984
No 139
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.69 E-value=1.1e-06 Score=95.94 Aligned_cols=137 Identities=22% Similarity=0.246 Sum_probs=101.8
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC---ccchHHHHHHHHHHHHHhCCCC
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDS---GNGETDDMEILLRYIQKKYPYL 107 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~---~~~~~~Dv~avl~~L~~~~~~~ 107 (1027)
.+.++||=+||.+ |+-. .|..+...|.+.|++++.+++||+|.+++.+.. ......-+.++++.+... .
T Consensus 33 s~~gTVv~~hGsP---GSH~--DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~---~ 104 (297)
T PF06342_consen 33 SPLGTVVAFHGSP---GSHN--DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK---G 104 (297)
T ss_pred CCceeEEEecCCC---CCcc--chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC---C
Confidence 4677999999964 3333 377899999999999999999999999875422 122334444555544332 4
Q ss_pred cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----------------------------------------
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---------------------------------------- 147 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---------------------------------------- 147 (1027)
+++++|||.|+-.|+.++..+| ..|+++++|+.-+.
T Consensus 105 ~~i~~gHSrGcenal~la~~~~----~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV 180 (297)
T PF06342_consen 105 KLIFLGHSRGCENALQLAVTHP----LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKV 180 (297)
T ss_pred ceEEEEeccchHHHHHHHhcCc----cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeee
Confidence 6999999999999999999985 57999999852210
Q ss_pred --------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 --------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 --------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.+.+-+.|+++.+|.+|.++.-+-+.+.+...
T Consensus 181 ~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f 238 (297)
T PF06342_consen 181 SDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF 238 (297)
T ss_pred cChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh
Confidence 04455689999999999999888887766544
No 140
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.66 E-value=3.5e-07 Score=99.90 Aligned_cols=132 Identities=20% Similarity=0.285 Sum_probs=95.3
Q ss_pred EEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy15208 20 AINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRY 99 (1027)
Q Consensus 20 ~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~ 99 (1027)
.++.|.. .+..|+|||+||+. ..+..|..+.++++++||.|+.+|+...... ......+++.++++|
T Consensus 7 ~v~~P~~---~g~yPVv~f~~G~~-----~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~-----~~~~~~~~~~~vi~W 73 (259)
T PF12740_consen 7 LVYYPSS---AGTYPVVLFLHGFL-----LINSWYSQLLEHVASHGYIVVAPDLYSIGGP-----DDTDEVASAAEVIDW 73 (259)
T ss_pred EEEecCC---CCCcCEEEEeCCcC-----CCHHHHHHHHHHHHhCceEEEEecccccCCC-----CcchhHHHHHHHHHH
Confidence 4556765 36799999999973 2344688999999999999999997654331 223467888889999
Q ss_pred HHHhC----------CCCcEEEEEechhHHHHHHHHHhcCC---cCCccEEEEEccCCC------------cCCCCC--C
Q psy15208 100 IQKKY----------PYLPIILAGFSFGTFVQAKLQKRLDK---EISIKILILISVAVK------------KWLIPE--V 152 (1027)
Q Consensus 100 L~~~~----------~~~pviLVGhSmGG~vAl~~A~~~p~---~~~V~gLVli~p~~~------------~~~l~~--i 152 (1027)
+.+.. +..++.|.|||.||-+|..++...-+ ..+++++++++|.-. .+.... .
T Consensus 74 l~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~P~v~~~~p~s~~~ 153 (259)
T PF12740_consen 74 LAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTEPPVLTYTPQSFDF 153 (259)
T ss_pred HHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCCCccccCcccccCC
Confidence 87632 23469999999999999999988721 126999999998642 111122 3
Q ss_pred CCcEEEEEeCCC
Q psy15208 153 PKNTIIIHGELD 164 (1027)
Q Consensus 153 ~~PvLiIhG~~D 164 (1027)
..|++++-..-.
T Consensus 154 ~~P~lviGtGLg 165 (259)
T PF12740_consen 154 SMPALVIGTGLG 165 (259)
T ss_pred CCCeEEEecccC
Confidence 489988854444
No 141
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.65 E-value=1.1e-06 Score=93.60 Aligned_cols=163 Identities=17% Similarity=0.161 Sum_probs=99.7
Q ss_pred EEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCC
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV-GASSGTY 83 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh-G~S~g~~ 83 (1027)
-...+...+| +|..+...|+.. .....++||+..|| +..++ .+.+++.+|+..||.|+.+|.-.| |.|+|..
T Consensus 3 idhvi~~~~~~~I~vwet~P~~~-~~~~~~tiliA~Gf---~rrmd--h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I 76 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRVWETRPKNN-EPKRNNTILIAPGF---ARRMD--HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI 76 (294)
T ss_dssp EEEEEEETTTEEEEEEEE---TT-S---S-EEEEE-TT----GGGG--GGHHHHHHHHTTT--EEEE---B---------
T ss_pred ccceeEcCCCCEEEEeccCCCCC-CcccCCeEEEecch---hHHHH--HHHHHHHHHhhCCeEEEeccccccccCCCCCh
Confidence 3456677777 688888888762 22456899999997 45665 488999999999999999998776 8899865
Q ss_pred C--CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----------------
Q psy15208 84 D--SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK---------------- 145 (1027)
Q Consensus 84 ~--~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~---------------- 145 (1027)
. +......|+..+++|+... +..++.|+.-|+.|.+|+..|.+. .+.-+|..-+...
T Consensus 77 ~eftms~g~~sL~~V~dwl~~~-g~~~~GLIAaSLSaRIAy~Va~~i----~lsfLitaVGVVnlr~TLe~al~~Dyl~~ 151 (294)
T PF02273_consen 77 NEFTMSIGKASLLTVIDWLATR-GIRRIGLIAASLSARIAYEVAADI----NLSFLITAVGVVNLRDTLEKALGYDYLQL 151 (294)
T ss_dssp ----HHHHHHHHHHHHHHHHHT-T---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHHHHHHHSS-GGGS
T ss_pred hhcchHHhHHHHHHHHHHHHhc-CCCcchhhhhhhhHHHHHHHhhcc----CcceEEEEeeeeeHHHHHHHHhccchhhc
Confidence 3 3345688999999999954 666799999999999999999854 3566665554321
Q ss_pred ----------------------------cC--------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 146 ----------------------------KW--------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 146 ----------------------------~~--------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.| .+..+.+|++.+++.+|.+|.......+....
T Consensus 152 ~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~ 221 (294)
T PF02273_consen 152 PIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNI 221 (294)
T ss_dssp -GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-
T ss_pred chhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhc
Confidence 00 16678999999999999999999988776643
No 142
>COG0400 Predicted esterase [General function prediction only]
Probab=98.65 E-value=2.4e-07 Score=98.58 Aligned_cols=137 Identities=20% Similarity=0.225 Sum_probs=88.7
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC-----------CCCCCccchHHHHHHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS-----------GTYDSGNGETDDMEILLRY 99 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~-----------g~~~~~~~~~~Dv~avl~~ 99 (1027)
+..|+||++||+| ++. ..+-++.+.+.. .+.++.+. |.-.-. +.+ +.+....+...+.++
T Consensus 16 p~~~~iilLHG~G---gde--~~~~~~~~~~~P-~~~~is~r--G~v~~~g~~~~f~~~~~~~~-d~edl~~~~~~~~~~ 86 (207)
T COG0400 16 PAAPLLILLHGLG---GDE--LDLVPLPELILP-NATLVSPR--GPVAENGGPRFFRRYDEGSF-DQEDLDLETEKLAEF 86 (207)
T ss_pred CCCcEEEEEecCC---CCh--hhhhhhhhhcCC-CCeEEcCC--CCccccCcccceeecCCCcc-chhhHHHHHHHHHHH
Confidence 4578999999974 332 224445555444 34444432 211100 111 122333444444444
Q ss_pred H---HHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC--C-CCCCCcEEEEEeCCCCCCChHH
Q psy15208 100 I---QKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL--I-PEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 100 L---~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~--l-~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
+ ..+++. .+++++|+|+|+.+++.+..++|. .++++++.+|..+... . ..-..|++++||..|+++|...
T Consensus 87 l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~--~~~~ail~~g~~~~~~~~~~~~~~~pill~hG~~Dpvvp~~~ 164 (207)
T COG0400 87 LEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPG--LFAGAILFSGMLPLEPELLPDLAGTPILLSHGTEDPVVPLAL 164 (207)
T ss_pred HHHHHHHhCCChhheEEEecChHHHHHHHHHHhCch--hhccchhcCCcCCCCCccccccCCCeEEEeccCcCCccCHHH
Confidence 4 344443 579999999999999999999998 7899999998765432 3 2345899999999999999998
Q ss_pred HHhhhCC
Q psy15208 172 VFLWANP 178 (1027)
Q Consensus 172 ~~~l~~~ 178 (1027)
+.++.+.
T Consensus 165 ~~~l~~~ 171 (207)
T COG0400 165 AEALAEY 171 (207)
T ss_pred HHHHHHH
Confidence 8766553
No 143
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.65 E-value=5.9e-07 Score=107.30 Aligned_cols=116 Identities=15% Similarity=0.128 Sum_probs=87.3
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHH-------HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVV-------QTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNG 88 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~-------~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~ 88 (1027)
.+..+.|.|... ..-+.+||+++++- |+.| +++.++|.++||.|+.+|+++-+.+.... +++.
T Consensus 200 l~eLiqY~P~te--~v~~~PLLIVPp~I-------NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~-~ldD 269 (560)
T TIGR01839 200 VLELIQYKPITE--QQHARPLLVVPPQI-------NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREW-GLST 269 (560)
T ss_pred ceEEEEeCCCCC--CcCCCcEEEechhh-------hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCC-CHHH
Confidence 456667777541 12345678999862 2223 67999999999999999999877665443 4455
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHH----HHHhcCCcCCccEEEEEcc
Q psy15208 89 ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAK----LQKRLDKEISIKILILISV 142 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~----~A~~~p~~~~V~gLVli~p 142 (1027)
.++.+.+.++.++...+..++.++||||||.++.. +++++++. +|+.++++.+
T Consensus 270 Yv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~-~V~sltllat 326 (560)
T TIGR01839 270 YVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLR-KVNSLTYLVS 326 (560)
T ss_pred HHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCC-ceeeEEeeec
Confidence 66788889999988878888999999999999886 67777642 5899887775
No 144
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.63 E-value=9e-08 Score=118.42 Aligned_cols=92 Identities=17% Similarity=0.093 Sum_probs=71.9
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC---------------C----------CCc
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT---------------Y----------DSG 86 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~---------------~----------~~~ 86 (1027)
..|+|||+||++. .. ..|..+++.|+++||+|+++|+||||.|... | ..+
T Consensus 448 g~P~VVllHG~~g---~~--~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~ 522 (792)
T TIGR03502 448 GWPVVIYQHGITG---AK--ENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNL 522 (792)
T ss_pred CCcEEEEeCCCCC---CH--HHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCH
Confidence 3579999999843 33 2588999999989999999999999999432 1 133
Q ss_pred cchHHHHHHHHHHHH------Hh------CCCCcEEEEEechhHHHHHHHHHhc
Q psy15208 87 NGETDDMEILLRYIQ------KK------YPYLPIILAGFSFGTFVQAKLQKRL 128 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~------~~------~~~~pviLVGhSmGG~vAl~~A~~~ 128 (1027)
+..+.|+..+...+. .. ++..+++++||||||.+++.++...
T Consensus 523 rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 523 RQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 556788888888776 22 4567899999999999999999763
No 145
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.61 E-value=7.7e-07 Score=103.76 Aligned_cols=122 Identities=11% Similarity=0.020 Sum_probs=73.8
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCC-----CC---hHHHHHHH---HHHHhCCcEEEEEcCCCCCCCCCC--
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGT-----MD---NKVVQTLV---RVMLSLGYISIRMNFRGVGASSGT-- 82 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs-----~~---~~~~~~la---~~La~~Gy~Vla~DlrGhG~S~g~-- 82 (1027)
++.+..|...+ ....++||++|++..++-. .+ ..+|..+. +.|--.-|-|+++|..|.|.|...
T Consensus 42 ~~~Y~t~G~ln---~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 42 QMGYETYGTLN---RAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred eEEEEeccccC---CCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 45555565433 1346899999998432100 00 11233332 223334699999999998763210
Q ss_pred ---------CC-------Ccc-chHHHHHHHHHHHHHhCCCCcEE-EEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 83 ---------YD-------SGN-GETDDMEILLRYIQKKYPYLPII-LAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 83 ---------~~-------~~~-~~~~Dv~avl~~L~~~~~~~pvi-LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+. ++. -...|....+..+.+..+..++. ++||||||++++.+|.++|+ +++++|++++
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~--~v~~lv~ia~ 194 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH--MVERMIGVIG 194 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEec
Confidence 00 111 12444433333333445566775 99999999999999999999 7999998853
No 146
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=98.60 E-value=1.6e-07 Score=107.20 Aligned_cols=150 Identities=19% Similarity=0.246 Sum_probs=104.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc---cCCEEEecCCCcc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK---YGDIFVTCTGNYH 877 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~---~aDvvi~atG~~~ 877 (1027)
..|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|++ +++ ..+... ..|++++++|...
T Consensus 168 ~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~ 247 (343)
T PRK09880 168 LQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPS 247 (343)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCCEEEECCCCHH
Confidence 479999999999999999999999999 699999999999889999986 332 222222 2799999999875
Q ss_pred cCcHHHHhcCCCCeEEEEecCCCc--ccchhhhhccceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEeh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFDN--EIEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSS 955 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d~--eid~~~l~~~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~ 955 (1027)
.+. ..++.|+++|.++.+|.... +++...+...+............+ .+.+.++++|++ .|..+++.
T Consensus 248 ~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~--~~~~~l~~~g~i--------~~~~~i~~ 316 (343)
T PRK09880 248 SIN-TCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEF--NTAVSWLANGVI--------NPLPLLSA 316 (343)
T ss_pred HHH-HHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccH--HHHHHHHHcCCC--------CchhheEE
Confidence 444 45899999999999997643 344332221122111111100111 346667777777 56566777
Q ss_pred hhHhHHHHHHHHh
Q psy15208 956 SFANQTLAQIELF 968 (1027)
Q Consensus 956 sf~~q~la~~~l~ 968 (1027)
.|.+..+.+.+-.
T Consensus 317 ~~~l~~~~~A~~~ 329 (343)
T PRK09880 317 EYPFTDLEEALIF 329 (343)
T ss_pred EEEHHHHHHHHHH
Confidence 7888877776654
No 147
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.60 E-value=2.7e-07 Score=99.04 Aligned_cols=115 Identities=18% Similarity=0.212 Sum_probs=90.1
Q ss_pred EEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHH
Q psy15208 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEIL 96 (1027)
Q Consensus 17 I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~av 96 (1027)
....++.|.. .+..|+|+|+||+ ...+.+|..+..+++++||-|+++++-.. .. ++....++++.++
T Consensus 33 kpLlI~tP~~---~G~yPVilF~HG~-----~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~~---p~~~~Ei~~aa~V 99 (307)
T PF07224_consen 33 KPLLIVTPSE---AGTYPVILFLHGF-----NLYNSFYSQLLAHIASHGFIVVAPQLYTL--FP---PDGQDEIKSAASV 99 (307)
T ss_pred CCeEEecCCc---CCCccEEEEeech-----hhhhHHHHHHHHHHhhcCeEEEechhhcc--cC---CCchHHHHHHHHH
Confidence 4445566655 4679999999997 33467899999999999999999999642 11 3445678999999
Q ss_pred HHHHHHhC----------CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 97 LRYIQKKY----------PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 97 l~~L~~~~----------~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
++|+.... ...++.|+|||.||..|..+|..+....++++||-++|..
T Consensus 100 ~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 100 INWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred HHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 99998642 1246999999999999999999886545689999999853
No 148
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.59 E-value=4.7e-07 Score=97.03 Aligned_cols=138 Identities=15% Similarity=0.241 Sum_probs=96.4
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHH----hCCCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQK----KYPYL 107 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~----~~~~~ 107 (1027)
.++-++++|=. ||+. ..|+.|...|.. -+.++++++||+|..-+.. ...|++.+.+.+.. .+...
T Consensus 6 ~~~~L~cfP~A---GGsa--~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep-----~~~di~~Lad~la~el~~~~~d~ 74 (244)
T COG3208 6 ARLRLFCFPHA---GGSA--SLFRSWSRRLPA-DIELLAVQLPGRGDRFGEP-----LLTDIESLADELANELLPPLLDA 74 (244)
T ss_pred CCceEEEecCC---CCCH--HHHHHHHhhCCc-hhheeeecCCCcccccCCc-----ccccHHHHHHHHHHHhccccCCC
Confidence 34445555532 3332 368899998865 6999999999999875542 24445555544443 23456
Q ss_pred cEEEEEechhHHHHHHHHHhcCCc-CCccEEEEEccCCCcC---------------------------------------
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKE-ISIKILILISVAVKKW--------------------------------------- 147 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~-~~V~gLVli~p~~~~~--------------------------------------- 147 (1027)
|+.++||||||++|..+|.+.... ..+.++.+.+...+..
T Consensus 75 P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~L 154 (244)
T COG3208 75 PFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFL 154 (244)
T ss_pred CeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHH
Confidence 899999999999999999886542 2356777776433211
Q ss_pred ----------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 148 ----------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 148 ----------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
.-..+.+|+.++.|++|..+..+....|.+..+
T Consensus 155 PilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~ 203 (244)
T COG3208 155 PILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK 203 (244)
T ss_pred HHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhc
Confidence 033678999999999999999999998877644
No 149
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.58 E-value=2e-06 Score=90.42 Aligned_cols=123 Identities=17% Similarity=0.214 Sum_probs=81.7
Q ss_pred EEEECCCCCCCCCCChHHHHHHHHHHHhCC--cEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEE
Q psy15208 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLSLG--YISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAG 113 (1027)
Q Consensus 36 VVllHG~~~~gGs~~~~~~~~la~~La~~G--y~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVG 113 (1027)
++++||+.+ +..+.-...+.+++++.+ ..+..+|++- . ..++...++.+........+.|+|
T Consensus 2 ilYlHGF~S---sp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~---------~----p~~a~~~l~~~i~~~~~~~~~liG 65 (187)
T PF05728_consen 2 ILYLHGFNS---SPQSFKAQALKQYFAEHGPDIQYPCPDLPP---------F----PEEAIAQLEQLIEELKPENVVLIG 65 (187)
T ss_pred eEEecCCCC---CCCCHHHHHHHHHHHHhCCCceEECCCCCc---------C----HHHHHHHHHHHHHhCCCCCeEEEE
Confidence 689999854 333334566777787765 4566666651 1 222333333333333433599999
Q ss_pred echhHHHHHHHHHhcCCcCCccEEEEEccCCCcC--------------------------------CC--CCCCCcEEEE
Q psy15208 114 FSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--------------------------------LI--PEVPKNTIII 159 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--------------------------------~l--~~i~~PvLiI 159 (1027)
.||||..|..++.+++- ++ |++.|+..++ .. ..-+.+++++
T Consensus 66 SSlGG~~A~~La~~~~~----~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~lvl 140 (187)
T PF05728_consen 66 SSLGGFYATYLAERYGL----PA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERYLVL 140 (187)
T ss_pred EChHHHHHHHHHHHhCC----CE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCccEEEE
Confidence 99999999999998853 44 8889875533 01 1224689999
Q ss_pred EeCCCCCCChHHHHhhhCCC
Q psy15208 160 HGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 160 hG~~D~iVP~~~~~~l~~~~ 179 (1027)
+++.|+++++..+.......
T Consensus 141 l~~~DEvLd~~~a~~~~~~~ 160 (187)
T PF05728_consen 141 LQTGDEVLDYREAVAKYRGC 160 (187)
T ss_pred EecCCcccCHHHHHHHhcCc
Confidence 99999999998877665543
No 150
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=98.54 E-value=1.7e-07 Score=94.81 Aligned_cols=92 Identities=23% Similarity=0.291 Sum_probs=71.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch-hHHHHhhcCcEEcCHHHHhccCCEEEecCCC---cccCcHHH
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI-CALQAAMEGFLVVTMEYAKKYGDIFVTCTGN---YHVITHDH 883 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~-r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~---~~vi~~~~ 883 (1027)
|.+|+|.|+|||.-|+..|+.||..|.+|+|..+... ....|..+||++.+.+|+++.+|+|+..++. +.+..++-
T Consensus 2 l~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~PD~~q~~vy~~~I 81 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLPDEVQPEVYEEEI 81 (165)
T ss_dssp HCTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-HHHHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCChHHHHHHHHHHH
Confidence 6899999999999999999999999999999877665 6778999999999999999999999988764 35555666
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
...||+|..|+..-.|
T Consensus 82 ~p~l~~G~~L~fahGf 97 (165)
T PF07991_consen 82 APNLKPGATLVFAHGF 97 (165)
T ss_dssp HHHS-TT-EEEESSSH
T ss_pred HhhCCCCCEEEeCCcc
Confidence 6789999999877555
No 151
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.53 E-value=3.8e-07 Score=98.99 Aligned_cols=154 Identities=17% Similarity=0.152 Sum_probs=97.7
Q ss_pred CCceEEEEEEecCCccccCCc-cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCC---CCCC---CCCC
Q psy15208 13 SVGILHCAINFPSSIKLLKLK-GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVG---ASSG---TYDS 85 (1027)
Q Consensus 13 ~dG~I~~~l~~P~~~~~~~~~-pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG---~S~g---~~~~ 85 (1027)
.+.++.+.+|.|++..+.... |.|||+||.++. |+ ++ .. .++ .|...++.+.|-.+ .++. -+.+
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~-g~-dn--~~----~l~-sg~gaiawa~pedqcfVlAPQy~~if~d 240 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQG-GS-DN--DK----VLS-SGIGAIAWAGPEDQCFVLAPQYNPIFAD 240 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCC-Cc-hh--hh----hhh-cCccceeeecccCceEEEcccccccccc
Confidence 344899999999764434455 999999997653 22 21 11 121 13333444444333 1111 0000
Q ss_pred c----cchHHHHH-HHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-cCCCCCC-CCcE
Q psy15208 86 G----NGETDDME-ILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-KWLIPEV-PKNT 156 (1027)
Q Consensus 86 ~----~~~~~Dv~-avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-~~~l~~i-~~Pv 156 (1027)
. ........ .+.+.+...+. ..+++++|.|+||..++.++.++|+ .+++.+++++... ...++.+ +.|+
T Consensus 241 ~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--fFAaa~~iaG~~d~v~lv~~lk~~pi 318 (387)
T COG4099 241 SEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--FFAAAVPIAGGGDRVYLVRTLKKAPI 318 (387)
T ss_pred cccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--hhheeeeecCCCchhhhhhhhccCce
Confidence 0 11222222 23335555554 3479999999999999999999999 7899999987765 3344444 4899
Q ss_pred EEEEeCCCCCCChHHHHhhhC
Q psy15208 157 IIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 157 LiIhG~~D~iVP~~~~~~l~~ 177 (1027)
-++|+.+|.++|.++++-...
T Consensus 319 Wvfhs~dDkv~Pv~nSrv~y~ 339 (387)
T COG4099 319 WVFHSSDDKVIPVSNSRVLYE 339 (387)
T ss_pred EEEEecCCCccccCcceeehH
Confidence 999999999999998874443
No 152
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.52 E-value=3.2e-07 Score=109.18 Aligned_cols=92 Identities=22% Similarity=0.289 Sum_probs=79.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC----------------------------H
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT----------------------------M 859 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~----------------------------~ 859 (1027)
..+.+|+|+|+|.+|+..++.++.+|++|+++|.++.++.++...|.+.+. +
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~ 241 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF 241 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999899888887522 2
Q ss_pred HHHhccCCEEEecC---CC--cccCcHHHHhcCCCCeEEEEecCC
Q psy15208 860 EYAKKYGDIFVTCT---GN--YHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 860 ~e~l~~aDvvi~at---G~--~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.+.++++||+|+|. |. +.++++++++.||+|+++++++.-
T Consensus 242 ~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 242 AAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 23456799999988 54 458999999999999999999764
No 153
>KOG2281|consensus
Probab=98.52 E-value=6.7e-07 Score=104.99 Aligned_cols=168 Identities=18% Similarity=0.262 Sum_probs=119.6
Q ss_pred EEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCC---CCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGG---TMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gG---s~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
+-+.++++.| ++|+.+|.|.+.+..++.|+|+++-|+++--- ++....+. -...|++.||.|+.+|-||.-...-
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~yl-R~~~LaslGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYL-RFCRLASLGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehh-hhhhhhhcceEEEEEcCCCccccch
Confidence 3456677666 89999999987655677999999999763211 11111111 1456888999999999999876653
Q ss_pred CC------CCccchHHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-----
Q psy15208 82 TY------DSGNGETDDMEILLRYIQKKYP---YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW----- 147 (1027)
Q Consensus 82 ~~------~~~~~~~~Dv~avl~~L~~~~~---~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~----- 147 (1027)
.+ ....-.++|-...+++|..+++ -+++.+-|+|+||.++++...++|+ -++..|+-+|. ..|
T Consensus 693 kFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~--IfrvAIAGapV-T~W~~YDT 769 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN--IFRVAIAGAPV-TDWRLYDT 769 (867)
T ss_pred hhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc--eeeEEeccCcc-eeeeeecc
Confidence 22 2344568888888999988763 4579999999999999999999998 34555555543 333
Q ss_pred ---------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 148 ---------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 148 ---------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
.++.-+...|++||--|+-|.+.+..++..
T Consensus 770 gYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs 826 (867)
T KOG2281|consen 770 GYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVS 826 (867)
T ss_pred cchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHH
Confidence 023334558999999999999988765543
No 154
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.50 E-value=3.9e-07 Score=105.57 Aligned_cols=92 Identities=24% Similarity=0.277 Sum_probs=75.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hcCcEE-------cCHHHHhccCCEEEecC---CC-
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-MEGFLV-------VTMEYAKKYGDIFVTCT---GN- 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~G~~v-------~~~~e~l~~aDvvi~at---G~- 875 (1027)
+.+++|+|+|+|.+|+.+++.|+.+|++|+++|+++.+..++. ..|..+ ..+.+.+.++|+||+|+ |.
T Consensus 165 l~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~ 244 (370)
T TIGR00518 165 VEPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAK 244 (370)
T ss_pred CCCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCC
Confidence 4678899999999999999999999999999999987766543 334321 23566778999999987 43
Q ss_pred -cccCcHHHHhcCCCCeEEEEecCC
Q psy15208 876 -YHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 876 -~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+.+++++.++.||+++++++++..
T Consensus 245 ~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 245 APKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCcCcCHHHHhcCCCCCEEEEEecC
Confidence 467899999999999999999864
No 155
>KOG3043|consensus
Probab=98.49 E-value=4.8e-07 Score=95.33 Aligned_cols=123 Identities=21% Similarity=0.266 Sum_probs=97.1
Q ss_pred HHHHHHHHHhCCcEEEEEcC-CCCCCCCCCC----------CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHH
Q psy15208 54 VQTLVRVMLSLGYISIRMNF-RGVGASSGTY----------DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQA 122 (1027)
Q Consensus 54 ~~~la~~La~~Gy~Vla~Dl-rGhG~S~g~~----------~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl 122 (1027)
.+..+..++.+||.|+.||+ +|--.|+... .+......|+..++++++++.+..++.++|+||||.++.
T Consensus 56 ~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv 135 (242)
T KOG3043|consen 56 TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVV 135 (242)
T ss_pred HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEE
Confidence 56789999999999999997 5522233210 123446789999999999887788999999999999999
Q ss_pred HHHHhcCCcCCccEEEEEccCC-CcCCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 123 KLQKRLDKEISIKILILISVAV-KKWLIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 123 ~~A~~~p~~~~V~gLVli~p~~-~~~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.+....|+ +.+.+..-|.. ..-....+++|+|++.++.|+++|+.....|.+.+
T Consensus 136 ~~~~~~~~---f~a~v~~hps~~d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~l 190 (242)
T KOG3043|consen 136 TLSAKDPE---FDAGVSFHPSFVDSADIANVKAPILFLFAELDEDVPPKDVKAWEEKL 190 (242)
T ss_pred Eeeccchh---heeeeEecCCcCChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHH
Confidence 88888775 67777666554 34457788999999999999999999988877654
No 156
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=98.48 E-value=1.3e-07 Score=106.63 Aligned_cols=147 Identities=14% Similarity=0.088 Sum_probs=96.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcEEcCHHH-HhccCCEEEecCCCcccCcHHHHh
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFLVVTMEY-AKKYGDIFVTCTGNYHVITHDHMR 885 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~v~~~~e-~l~~aDvvi~atG~~~vi~~~~~~ 885 (1027)
..|++|+|+|.|.||..+++.|+.+|++ |+++|.++.|+..|.... +.+..+ .-...|++|+|+|+...+. ..++
T Consensus 143 ~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~--~i~~~~~~~~g~Dvvid~~G~~~~~~-~~~~ 219 (308)
T TIGR01202 143 VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGYE--VLDPEKDPRRDYRAIYDASGDPSLID-TLVR 219 (308)
T ss_pred cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhcc--ccChhhccCCCCCEEEECCCCHHHHH-HHHH
Confidence 3688999999999999999999999997 667788887776665443 233222 2235799999999876444 4599
Q ss_pred cCCCCeEEEEecCCCcc--cchhhhhccceeccccceeeeecCC-CcEEEEecCCccccccCCCCCCcceEehhhHhHHH
Q psy15208 886 DMKDQAIVCNIGHFDNE--IEVEKLKKYKWENIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTL 962 (1027)
Q Consensus 886 ~mk~gailvNvG~~d~e--id~~~l~~~~~~~~~~~v~~y~~~d-g~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~l 962 (1027)
.|+++|+++.+|..... +++..+...+..... ...+...+ .+.+.++++|++ .|..+++..|.+..+
T Consensus 220 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~l~~~g~i--------~~~~~it~~~~l~~~ 289 (308)
T TIGR01202 220 RLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRI--AAEWQPGDLHAVRELIESGAL--------SLDGLITHQRPASDA 289 (308)
T ss_pred hhhcCcEEEEEeecCCCcccccchhhhcceEEEE--ecccchhHHHHHHHHHHcCCC--------ChhhccceeecHHHH
Confidence 99999999999986433 332222111111111 00111111 356667777777 455566777777766
Q ss_pred HHHHH
Q psy15208 963 AQIEL 967 (1027)
Q Consensus 963 a~~~l 967 (1027)
...+-
T Consensus 290 ~~A~~ 294 (308)
T TIGR01202 290 AEAYM 294 (308)
T ss_pred HHHHH
Confidence 66553
No 157
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.47 E-value=6.7e-07 Score=97.87 Aligned_cols=156 Identities=12% Similarity=0.097 Sum_probs=103.4
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcC-CCCC------CCCCC
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNF-RGVG------ASSGT 82 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dl-rGhG------~S~g~ 82 (1027)
+........+++|.|.+.+ ...|+||++||..+++..+.+ ...|-+...+.||-|+.||- +++- .+.+.
T Consensus 40 ~~~~g~~r~y~l~vP~g~~--~~apLvv~LHG~~~sgag~~~--~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p 115 (312)
T COG3509 40 FDVNGLKRSYRLYVPPGLP--SGAPLVVVLHGSGGSGAGQLH--GTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGP 115 (312)
T ss_pred cccCCCccceEEEcCCCCC--CCCCEEEEEecCCCChHHhhc--ccchhhhhcccCcEEECcCccccccCCCcccccCCc
Confidence 4444446788889998742 345899999997654443332 12233333457999999964 3222 12111
Q ss_pred C--CCccchHHHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC--CCCCCCCcE
Q psy15208 83 Y--DSGNGETDDMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--LIPEVPKNT 156 (1027)
Q Consensus 83 ~--~~~~~~~~Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--~l~~i~~Pv 156 (1027)
. ......+.++.++++.+..++..+ +|++.|.|-||.++..+++.+|+ .+.++..++...+.- ....-..++
T Consensus 116 ~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--~faa~A~VAg~~~~~~a~~~~rp~~~ 193 (312)
T COG3509 116 ADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--IFAAIAPVAGLLALGVACTPPRPVSV 193 (312)
T ss_pred ccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--cccceeeeecccCCCcccCCCCchhH
Confidence 1 123457888899999999988776 69999999999999999999999 677777666544211 112223567
Q ss_pred EEEEeCCCCCCChHH
Q psy15208 157 IIIHGELDEIIPLKD 171 (1027)
Q Consensus 157 LiIhG~~D~iVP~~~ 171 (1027)
+.+||..|+..|+..
T Consensus 194 m~~~G~~Dp~~p~~g 208 (312)
T COG3509 194 MAFHGTADPLNPYHG 208 (312)
T ss_pred HHhcCCCCCCCCCCC
Confidence 788888888776643
No 158
>KOG2624|consensus
Probab=98.47 E-value=1.8e-06 Score=100.18 Aligned_cols=137 Identities=22% Similarity=0.163 Sum_probs=104.3
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCC-hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMD-NKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~-~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+.+.+.|.||.+.+....|... .++|+|++.||.-..+.++- +..-..++=.|+++||+|+.-+.||.-.|.++
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 467789999999877777777762 67999999999744333221 11224577789999999999999998887742
Q ss_pred C---C---------Cccc-hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC-cCCccEEEEEccC
Q psy15208 83 Y---D---------SGNG-ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK-EISIKILILISVA 143 (1027)
Q Consensus 83 ~---~---------~~~~-~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~ 143 (1027)
. + ++.+ -..|+-+.++++...-+..+++.+|||+|+.+........|+ ..+|+..++++|+
T Consensus 124 ~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~ 198 (403)
T KOG2624|consen 124 KKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPA 198 (403)
T ss_pred cccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecch
Confidence 1 1 1222 467899999999887677789999999999999999988865 2368888998885
No 159
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.46 E-value=1.8e-06 Score=97.38 Aligned_cols=121 Identities=17% Similarity=0.134 Sum_probs=89.1
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEI 95 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~a 95 (1027)
.+.+..|.|.. ......|+||++||+++..++.+. ....+...+...|+.|+.+|||---+- .+....+|+.+
T Consensus 63 ~~~~~~y~p~~-~~~~~~p~vly~HGGg~~~g~~~~-~~~~~~~~~~~~g~~vv~vdYrlaPe~-----~~p~~~~d~~~ 135 (312)
T COG0657 63 GVPVRVYRPDR-KAAATAPVVLYLHGGGWVLGSLRT-HDALVARLAAAAGAVVVSVDYRLAPEH-----PFPAALEDAYA 135 (312)
T ss_pred ceeEEEECCCC-CCCCCCcEEEEEeCCeeeecChhh-hHHHHHHHHHHcCCEEEecCCCCCCCC-----CCCchHHHHHH
Confidence 37788888821 112458999999999887777654 234566667778999999999843222 34457899999
Q ss_pred HHHHHHHhC-----CCCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccC
Q psy15208 96 LLRYIQKKY-----PYLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVA 143 (1027)
Q Consensus 96 vl~~L~~~~-----~~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~ 143 (1027)
.+.|+..+. +..+++++|+|.||.+++.++....++ ....+.++++|.
T Consensus 136 a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 136 AYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred HHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 999998652 245799999999999999998775532 346888888875
No 160
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.45 E-value=1.1e-06 Score=99.88 Aligned_cols=129 Identities=19% Similarity=0.124 Sum_probs=79.2
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCCh----------------HHHHHHHHHHHhCCcE
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDN----------------KVVQTLVRVMLSLGYI 67 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~----------------~~~~~la~~La~~Gy~ 67 (1027)
.+++.|.+..+ ++.+++..|++. .++.|.||++||.+ +..+. ..-..++.+|+++||.
T Consensus 88 ~EKv~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg---~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 88 REKVEFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHG---GGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp EEEEEE--STTB-EEEEEEEETT----S-EEEEEEE--TT-----HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred EEEEEEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCC---CCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 45577776666 899999999873 36789999999964 22210 0012468899999999
Q ss_pred EEEEcCCCCCCCCCCCC-------Ccc---------------chHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHH
Q psy15208 68 SIRMNFRGVGASSGTYD-------SGN---------------GETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAK 123 (1027)
Q Consensus 68 Vla~DlrGhG~S~g~~~-------~~~---------------~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~ 123 (1027)
|+++|.+|.|+....-. +.. ....|...+++||..+.. .++|.++|+||||..++.
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 99999999998753210 000 124444567778776532 246999999999999999
Q ss_pred HHHhcCCcCCccEEEEEc
Q psy15208 124 LQKRLDKEISIKILILIS 141 (1027)
Q Consensus 124 ~A~~~p~~~~V~gLVli~ 141 (1027)
+++..+ +|++.|..+
T Consensus 243 LaALDd---RIka~v~~~ 257 (390)
T PF12715_consen 243 LAALDD---RIKATVANG 257 (390)
T ss_dssp HHHH-T---T--EEEEES
T ss_pred HHHcch---hhHhHhhhh
Confidence 999865 488877665
No 161
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.45 E-value=5.6e-07 Score=94.96 Aligned_cols=113 Identities=19% Similarity=0.249 Sum_probs=79.1
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
.....++-+|| .+.+..|...+ .....++..-+. | .....++.++..++.+||.|+.+|+||.|+|...-
T Consensus 5 a~e~~l~~~DG~~l~~~~~pA~~----~~~g~~~va~a~----G-v~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~ 75 (281)
T COG4757 5 ATEAHLPAPDGYSLPGQRFPADG----KASGRLVVAGAT----G-VGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPAS 75 (281)
T ss_pred ccccccccCCCccCccccccCCC----CCCCcEEecccC----C-cchhHhHHHHHHhhccCceEEEEecccccCCCccc
Confidence 33466888899 67776665443 223233333332 1 12246889999999999999999999999997421
Q ss_pred C-----Cc-cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHH
Q psy15208 84 D-----SG-NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQK 126 (1027)
Q Consensus 84 ~-----~~-~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~ 126 (1027)
. .+ +=-..|+.+.+++++...+..|...+||||||.+.-.+..
T Consensus 76 ~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 76 LSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred cccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc
Confidence 1 11 1235788899999998888889999999999987655543
No 162
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.43 E-value=2.9e-06 Score=106.62 Aligned_cols=85 Identities=14% Similarity=0.226 Sum_probs=71.4
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc-cchHHHHHHHHHHHHHhC----------------CCCcEEEEEechhH
Q psy15208 56 TLVRVMLSLGYISIRMNFRGVGASSGTYDSG-NGETDDMEILLRYIQKKY----------------PYLPIILAGFSFGT 118 (1027)
Q Consensus 56 ~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~-~~~~~Dv~avl~~L~~~~----------------~~~pviLVGhSmGG 118 (1027)
.+.++|+++||.|+.+|.||+|.|.|.+..+ ....+|..++++|+..+. ...+|.++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 4678899999999999999999999976443 668899999999998431 13479999999999
Q ss_pred HHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 119 FVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 119 ~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.+++.+|...|+ .++++|..++
T Consensus 350 ~~~~~aAa~~pp--~LkAIVp~a~ 371 (767)
T PRK05371 350 TLPNAVATTGVE--GLETIIPEAA 371 (767)
T ss_pred HHHHHHHhhCCC--cceEEEeeCC
Confidence 999999998877 5788887754
No 163
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.42 E-value=9.2e-07 Score=98.05 Aligned_cols=91 Identities=24% Similarity=0.321 Sum_probs=76.5
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCChh-HHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGDV-GKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~I-G~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+. ..++.+.||+|+|+|.|.+ |+.+|..|...||+|++++.. .-++.+.+++||+||
T Consensus 141 Tp~aii~lL~-~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~-------------t~~l~~~~~~ADIVV 206 (285)
T PRK14189 141 TPYGVMKMLE-SIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK-------------TRDLAAHTRQADIVV 206 (285)
T ss_pred CHHHHHHHHH-HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC-------------CCCHHHHhhhCCEEE
Confidence 4555554444 4578899999999999996 999999999999999998542 235778889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.++|.+++++.+ ++|+|++++|+|..
T Consensus 207 ~avG~~~~i~~~---~ik~gavVIDVGin 232 (285)
T PRK14189 207 AAVGKRNVLTAD---MVKPGATVIDVGMN 232 (285)
T ss_pred EcCCCcCccCHH---HcCCCCEEEEcccc
Confidence 999999999974 58999999999975
No 164
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.41 E-value=1.3e-06 Score=96.98 Aligned_cols=92 Identities=25% Similarity=0.388 Sum_probs=77.7
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+.+ .++.+.||+|+|+|.|. +|+.+|+.|...||+|++++... .++.+.+++||+||
T Consensus 141 Tp~ai~~ll~~-~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-------------~~l~~~~~~ADIVI 206 (286)
T PRK14175 141 TPLGIMEILKH-ADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-------------KDMASYLKDADVIV 206 (286)
T ss_pred cHHHHHHHHHH-cCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHHHhhCCEEE
Confidence 45555555544 47789999999999999 99999999999999999997642 25678889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.|+|.+++++.++ +|+|++++++|...
T Consensus 207 sAvg~p~~i~~~~---vk~gavVIDvGi~~ 233 (286)
T PRK14175 207 SAVGKPGLVTKDV---VKEGAVIIDVGNTP 233 (286)
T ss_pred ECCCCCcccCHHH---cCCCcEEEEcCCCc
Confidence 9999999999864 79999999999863
No 165
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.41 E-value=1.2e-06 Score=97.64 Aligned_cols=94 Identities=26% Similarity=0.321 Sum_probs=77.7
Q ss_pred hhhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCE
Q psy15208 790 YGCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDI 868 (1027)
Q Consensus 790 ~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDv 868 (1027)
+.|-.++...+.+ .+..+.||+|+|+|.|. +|+.+|..|...||+|++++... .++.+.++++|+
T Consensus 140 p~T~~gii~~L~~-~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-------------~~L~~~~~~aDI 205 (283)
T PRK14192 140 SATPAGIMRLLKA-YNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-------------QNLPELVKQADI 205 (283)
T ss_pred CCcHHHHHHHHHH-cCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-------------hhHHHHhccCCE
Confidence 4455666665554 57789999999999998 99999999999999999997521 245667789999
Q ss_pred EEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 869 FVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 869 vi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
||+|||.++.++.+ .+|+|++++++|...
T Consensus 206 vI~AtG~~~~v~~~---~lk~gavViDvg~n~ 234 (283)
T PRK14192 206 IVGAVGKPELIKKD---WIKQGAVVVDAGFHP 234 (283)
T ss_pred EEEccCCCCcCCHH---HcCCCCEEEEEEEee
Confidence 99999988888865 489999999999875
No 166
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.41 E-value=1.5e-06 Score=90.20 Aligned_cols=100 Identities=28% Similarity=0.358 Sum_probs=68.4
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCCCCCCCC--CCCCCccchHHHHHHHHHHHHHhCCCCc
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFRGVGASS--GTYDSGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~DlrGhG~S~--g~~~~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
.|.++++||++.. .. .|......+... .|+++.+|+||||.|. .. .....+.++..+++ .....+
T Consensus 21 ~~~i~~~hg~~~~---~~--~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~--~~~~~~~~~~~~~~----~~~~~~ 89 (282)
T COG0596 21 GPPLVLLHGFPGS---SS--VWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGY--SLSAYADDLAALLD----ALGLEK 89 (282)
T ss_pred CCeEEEeCCCCCc---hh--hhHHHHHHhhccccceEEEEecccCCCCCCcccc--cHHHHHHHHHHHHH----HhCCCc
Confidence 4488999997432 22 233322222221 1999999999999997 11 11122444444444 334446
Q ss_pred EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
++++||||||.+++.++.++|+ ++++++++++...
T Consensus 90 ~~l~G~S~Gg~~~~~~~~~~p~--~~~~~v~~~~~~~ 124 (282)
T COG0596 90 VVLVGHSMGGAVALALALRHPD--RVRGLVLIGPAPP 124 (282)
T ss_pred eEEEEecccHHHHHHHHHhcch--hhheeeEecCCCC
Confidence 9999999999999999999998 7999999998764
No 167
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=98.39 E-value=2.1e-06 Score=91.26 Aligned_cols=87 Identities=28% Similarity=0.353 Sum_probs=71.8
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc-CcEEcCHHHHhc-cCCEEEecCCCcccCcHH
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME-GFLVVTMEYAKK-YGDIFVTCTGNYHVITHD 882 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~-G~~v~~~~e~l~-~aDvvi~atG~~~vi~~~ 882 (1027)
+..+.||+++|+|+|.+|+.+|+.|..+|++|+++|.++.+..+.... |...++.++.+. ++|+++.|+. .++++.+
T Consensus 23 ~~~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l~~~~~Dv~vp~A~-~~~I~~~ 101 (200)
T cd01075 23 TDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEIYSVDADVFAPCAL-GGVINDD 101 (200)
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhhccccCCEEEeccc-ccccCHH
Confidence 557899999999999999999999999999999999998766654443 777777777765 7999997764 3589999
Q ss_pred HHhcCCCCeE
Q psy15208 883 HMRDMKDQAI 892 (1027)
Q Consensus 883 ~~~~mk~gai 892 (1027)
.++.|+...+
T Consensus 102 ~~~~l~~~~v 111 (200)
T cd01075 102 TIPQLKAKAI 111 (200)
T ss_pred HHHHcCCCEE
Confidence 9999985543
No 168
>PLN02827 Alcohol dehydrogenase-like
Probab=98.37 E-value=7.1e-07 Score=103.66 Aligned_cols=167 Identities=17% Similarity=0.168 Sum_probs=111.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHhc-----cCCEEEecC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAKK-----YGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l~-----~aDvvi~at 873 (1027)
..|++|+|.|.|.||..+++.++.+|+ +|++++.++.+...|...|++ +.+. .+.+. ..|+|++++
T Consensus 192 ~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~ 271 (378)
T PLN02827 192 SKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECV 271 (378)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECC
Confidence 579999999999999999999999999 588899888888888888885 3321 12121 479999999
Q ss_pred CCcccCcHHHHhcCCCC-eEEEEecCCCc--ccchh-hhhccceeccccceeeeec-CC-CcEEEEecCCccccccCCCC
Q psy15208 874 GNYHVITHDHMRDMKDQ-AIVCNIGHFDN--EIEVE-KLKKYKWENIKPQVDHIIF-PD-GKKIILLAEGRLVNLGCGTG 947 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~g-ailvNvG~~d~--eid~~-~l~~~~~~~~~~~v~~y~~-~d-g~~i~LLa~GrlvNl~~~~G 947 (1027)
|....+. ..++.+++| |+++.+|.... +++.. .+...+..........+.. .+ .+.+.++++|++
T Consensus 272 G~~~~~~-~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i-------- 342 (378)
T PLN02827 272 GDTGIAT-TALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEI-------- 342 (378)
T ss_pred CChHHHH-HHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCC--------
Confidence 9876454 458999998 99999998632 23221 1111111111111111110 11 245567777877
Q ss_pred CCcceEehhhHhHHHHHHHHhhcCCCCCCcEEeCCh
Q psy15208 948 HPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLPK 983 (1027)
Q Consensus 948 ~P~~vmd~sf~~q~la~~~l~~~~~~~~~gv~~lp~ 983 (1027)
.|..+++..|.+......+-.-..++.-+.|+.+|+
T Consensus 343 ~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~~ 378 (378)
T PLN02827 343 MIDEFITHNLSFDEINKAFELMREGKCLRCVIHMPK 378 (378)
T ss_pred ChHHheEEEecHHHHHHHHHHHHCCCceEEEEEecC
Confidence 566678888888877766655333344588888885
No 169
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.36 E-value=1.2e-06 Score=92.37 Aligned_cols=102 Identities=20% Similarity=0.229 Sum_probs=76.0
Q ss_pred EEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-----CCCCcE
Q psy15208 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKK-----YPYLPI 109 (1027)
Q Consensus 36 VVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~-----~~~~pv 109 (1027)
||++||+++..++.+. ...++..+++ .|+.|+.+|||-. +. ..+....+|+.++++|+.+. .+..++
T Consensus 1 v~~~HGGg~~~g~~~~--~~~~~~~la~~~g~~v~~~~Yrl~---p~--~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--HWPFAARLAAERGFVVVSIDYRLA---PE--APFPAALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTT--HHHHHHHHHHHHTSEEEEEE---T---TT--SSTTHHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHH--HHHHHHHHHhhccEEEEEeecccc---cc--ccccccccccccceeeeccccccccccccce
Confidence 6999999988777664 3556666665 8999999999943 22 24557899999999999886 555689
Q ss_pred EEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCC
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAV 144 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~ 144 (1027)
+|+|+|.||.+++.++.+..+. ..++++++++|..
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 9999999999999999865442 3489999999854
No 170
>KOG2100|consensus
Probab=98.35 E-value=3.7e-06 Score=105.44 Aligned_cols=162 Identities=15% Similarity=0.238 Sum_probs=113.8
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHH-HHhCCcEEEEEcCCCCCCCCCCC-----CC-ccc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRV-MLSLGYISIRMNFRGVGASSGTY-----DS-GNG 88 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~-La~~Gy~Vla~DlrGhG~S~g~~-----~~-~~~ 88 (1027)
...+.+..|++-......|++|.+||++... ......-..|... +...|+.|+.+|.||.|.....+ .. +..
T Consensus 509 ~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq-~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ 587 (755)
T KOG2100|consen 509 TANAILILPPNFDPSKKYPLLVVVYGGPGSQ-SVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDV 587 (755)
T ss_pred EEEEEEecCCCCCCCCCCCEEEEecCCCCcc-eeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCc
Confidence 6778888897644456789999999976411 1111111123333 56689999999999998876532 11 224
Q ss_pred hHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc----------C---------
Q psy15208 89 ETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK----------W--------- 147 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~----------~--------- 147 (1027)
.+.|...+++++.+.. +..++.++|+|.||.+++.++...|+. -+++.++++|.... +
T Consensus 588 ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~-~fkcgvavaPVtd~~~yds~~terymg~p~~~~~ 666 (755)
T KOG2100|consen 588 EVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGD-VFKCGVAVAPVTDWLYYDSTYTERYMGLPSENDK 666 (755)
T ss_pred chHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCc-eEEEEEEecceeeeeeecccccHhhcCCCccccc
Confidence 6788887777777653 334699999999999999999998852 35666888885331 1
Q ss_pred ---------CCCCCCCcE-EEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 ---------LIPEVPKNT-IIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 ---------~l~~i~~Pv-LiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.+..++.|. |++||+.|.-|+.+++..+.+.+
T Consensus 667 ~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL 708 (755)
T KOG2100|consen 667 GYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKAL 708 (755)
T ss_pred hhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHH
Confidence 133455565 99999999999999988777654
No 171
>KOG1553|consensus
Probab=98.33 E-value=8.1e-07 Score=97.80 Aligned_cols=154 Identities=18% Similarity=0.209 Sum_probs=107.9
Q ss_pred EEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD 84 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~ 84 (1027)
++..+.+.|| +|.+.+......+.+..+..|+++.|. .|..+- .....-++.||.|+.+++||++.|.+.+
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGN---AGFYEv----G~m~tP~~lgYsvLGwNhPGFagSTG~P- 286 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGN---AGFYEV----GVMNTPAQLGYSVLGWNHPGFAGSTGLP- 286 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCC---ccceEe----eeecChHHhCceeeccCCCCccccCCCC-
Confidence 4567888887 566544432211123446788888885 444331 2333344679999999999999999864
Q ss_pred CccchHHHHHHHHHHHHHh--CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-----------cC----
Q psy15208 85 SGNGETDDMEILLRYIQKK--YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-----------KW---- 147 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~--~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-----------~~---- 147 (1027)
...+..+.+.+++++..+. ++...++|.|+|.||..+.++|..||+ |+++|+.+..-. .|
T Consensus 287 ~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---VkavvLDAtFDDllpLAl~rMP~~~~giV 363 (517)
T KOG1553|consen 287 YPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKAVVLDATFDDLLPLALFRMPTFFSGIV 363 (517)
T ss_pred CcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceEEEeecchhhhhhHHhhhchHHHHHHH
Confidence 2233456666777777664 455569999999999999999999998 999999987422 11
Q ss_pred --------------CCCCCCCcEEEEEeCCCCCCChH
Q psy15208 148 --------------LIPEVPKNTIIIHGELDEIIPLK 170 (1027)
Q Consensus 148 --------------~l~~i~~PvLiIhG~~D~iVP~~ 170 (1027)
++.+.+.|+.+|.-.+|+++.-.
T Consensus 364 ~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 364 EHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred HHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 25567889999999999886543
No 172
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=98.31 E-value=1.3e-06 Score=97.35 Aligned_cols=179 Identities=17% Similarity=0.214 Sum_probs=124.0
Q ss_pred chhhhh-hHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHHHH---
Q psy15208 789 LYGCRE-SLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTMEYA--- 862 (1027)
Q Consensus 789 ~~g~~~-s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~e~--- 862 (1027)
..||+- .-+-+.....+ .-.|.+|+|+|+|.||.++.+.|+..|| +++.+|+++.+...|...|++ +++..+.
T Consensus 165 llGCgV~TG~Gav~nta~-v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~~v 243 (366)
T COG1062 165 LLGCGVTTGIGAVVNTAK-VEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDV 243 (366)
T ss_pred EEeeeeccChHHhhhccc-CCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhhhH
Confidence 355553 22333344333 4689999999999999999999999999 799999999999999999986 3332211
Q ss_pred ---h----c-cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC--Ccccchhhhhccceecc-----ccceeeeecCC
Q psy15208 863 ---K----K-YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF--DNEIEVEKLKKYKWENI-----KPQVDHIIFPD 927 (1027)
Q Consensus 863 ---l----~-~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~--d~eid~~~l~~~~~~~~-----~~~v~~y~~~d 927 (1027)
+ . .+|..|+|+|+.+++. +.|+...+++..+-+|.. ..+|++....-...+.+ .....++.+|
T Consensus 244 v~~i~~~T~gG~d~~~e~~G~~~~~~-~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~~diP- 321 (366)
T COG1062 244 VEAIVELTDGGADYAFECVGNVEVMR-QALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRSDIP- 321 (366)
T ss_pred HHHHHHhcCCCCCEEEEccCCHHHHH-HHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccccchh-
Confidence 1 1 4899999999999655 558999889999999987 46777665443211222 2222334444
Q ss_pred CcEEEEecCCccccccCCCCCCcceEehhhHhHHHHHHHHhhcCCCCCCcEE
Q psy15208 928 GKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIY 979 (1027)
Q Consensus 928 g~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~la~~~l~~~~~~~~~gv~ 979 (1027)
+-+.+--+||+ ...+.+++.+.+..+-+.+-.-+.++....|+
T Consensus 322 -~lv~~y~~Gkl--------~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi 364 (366)
T COG1062 322 -RLVDLYMAGKL--------PLDRLVTHTIPLEDINEAFDLMHEGKSIRSVI 364 (366)
T ss_pred -HHHHHHHcCCC--------chhHHhhccccHHHHHHHHHHHhCCceeeEEe
Confidence 55566667777 55667777777777666666655555555554
No 173
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=98.31 E-value=3.2e-06 Score=86.48 Aligned_cols=92 Identities=24% Similarity=0.309 Sum_probs=68.3
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-++++.-+.+ .+..+.||+|+|+|.+. +|+-++..|...||.|++++..- .++++.+++||+|
T Consensus 18 cTp~aii~lL~~-~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T-------------~~l~~~~~~ADIV 83 (160)
T PF02882_consen 18 CTPLAIIELLEY-YGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT-------------KNLQEITRRADIV 83 (160)
T ss_dssp HHHHHHHHHHHH-TT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS-------------SSHHHHHTTSSEE
T ss_pred CCHHHHHHHHHh-cCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC-------------CcccceeeeccEE
Confidence 355666665554 57789999999999998 99999999999999999996643 3567788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.++|.++++..+ .+|+|++++++|..
T Consensus 84 Vsa~G~~~~i~~~---~ik~gavVIDvG~~ 110 (160)
T PF02882_consen 84 VSAVGKPNLIKAD---WIKPGAVVIDVGIN 110 (160)
T ss_dssp EE-SSSTT-B-GG---GS-TTEEEEE--CE
T ss_pred eeeeccccccccc---cccCCcEEEecCCc
Confidence 9999999998866 57999999999985
No 174
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.30 E-value=6.3e-06 Score=84.26 Aligned_cols=136 Identities=14% Similarity=0.106 Sum_probs=89.0
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAG 113 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVG 113 (1027)
.-++++||+. +|..+++...|-+.|.. +-.+++. ....+..+.++..+.+.+. .. ..+++||+
T Consensus 3 ~~~lIVpG~~---~Sg~~HWq~~we~~l~~----a~rveq~-----~w~~P~~~dWi~~l~~~v~---a~--~~~~vlVA 65 (181)
T COG3545 3 TDVLIVPGYG---GSGPNHWQSRWESALPN----ARRVEQD-----DWEAPVLDDWIARLEKEVN---AA--EGPVVLVA 65 (181)
T ss_pred ceEEEecCCC---CCChhHHHHHHHhhCcc----chhcccC-----CCCCCCHHHHHHHHHHHHh---cc--CCCeEEEE
Confidence 3579999973 34344344444444432 3333332 1222332333333333222 22 33699999
Q ss_pred echhHHHHHHHHHhcCCcCCccEEEEEccCCCc--------------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 114 FSFGTFVQAKLQKRLDKEISIKILILISVAVKK--------------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--------------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
||+|+.+++.++.+... .|+|+++++|+-.. ....+...|.++++..+|++++++.+..+++..
T Consensus 66 HSLGc~~v~h~~~~~~~--~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w 143 (181)
T COG3545 66 HSLGCATVAHWAEHIQR--QVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW 143 (181)
T ss_pred ecccHHHHHHHHHhhhh--ccceEEEecCCCccccccchhhccccCCCccccCCCceeEEEecCCCCCCHHHHHHHHHhc
Confidence 99999999999998766 79999999987421 124456689999999999999999999998887
Q ss_pred CCceEeecc
Q psy15208 180 DIPVVVIPE 188 (1027)
Q Consensus 180 ~~~~L~t~E 188 (1027)
...++...+
T Consensus 144 gs~lv~~g~ 152 (181)
T COG3545 144 GSALVDVGE 152 (181)
T ss_pred cHhheeccc
Confidence 765554443
No 175
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=98.28 E-value=5.2e-06 Score=83.20 Aligned_cols=92 Identities=15% Similarity=0.213 Sum_probs=76.9
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-++...-+.+ .++.+.||+|+|+|-+. +|+.+|..|...|+.|++++.+- .++++.+++||+||
T Consensus 11 t~~a~~~ll~~-~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t-------------~~l~~~v~~ADIVv 76 (140)
T cd05212 11 VAKAVKELLNK-EGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT-------------IQLQSKVHDADVVV 76 (140)
T ss_pred HHHHHHHHHHH-cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC-------------cCHHHHHhhCCEEE
Confidence 44555554444 47889999999999999 99999999999999999997643 25677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
+++|.+++++.+ ++|+|++++++|..-
T Consensus 77 sAtg~~~~i~~~---~ikpGa~Vidvg~~~ 103 (140)
T cd05212 77 VGSPKPEKVPTE---WIKPGATVINCSPTK 103 (140)
T ss_pred EecCCCCccCHH---HcCCCCEEEEcCCCc
Confidence 999999998876 489999999998753
No 176
>KOG4627|consensus
Probab=98.27 E-value=3.3e-06 Score=87.65 Aligned_cols=156 Identities=15% Similarity=0.140 Sum_probs=113.0
Q ss_pred CCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHH
Q psy15208 13 SVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDD 92 (1027)
Q Consensus 13 ~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~D 92 (1027)
++|+..+-+|.|.. ..++.||+||+-|..|+.. .....+.-+.++||+|..+++ +.++.. .+......+
T Consensus 52 ~~g~q~VDIwg~~~-----~~klfIfIHGGYW~~g~rk--~clsiv~~a~~~gY~vasvgY---~l~~q~-htL~qt~~~ 120 (270)
T KOG4627|consen 52 EGGRQLVDIWGSTN-----QAKLFIFIHGGYWQEGDRK--MCLSIVGPAVRRGYRVASVGY---NLCPQV-HTLEQTMTQ 120 (270)
T ss_pred CCCceEEEEecCCC-----CccEEEEEecchhhcCchh--cccchhhhhhhcCeEEEEecc---CcCccc-ccHHHHHHH
Confidence 44567778888865 5789999999877666543 234556666778999999866 455433 245566788
Q ss_pred HHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC--------------------------C
Q psy15208 93 MEILLRYIQKKYPYLP-IILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV--------------------------K 145 (1027)
Q Consensus 93 v~avl~~L~~~~~~~p-viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~--------------------------~ 145 (1027)
+...++|+...++..+ +.+-|||.|+.+++.+..+..+ +++.|+++.++.- .
T Consensus 121 ~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~-prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scd 199 (270)
T KOG4627|consen 121 FTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRS-PRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCD 199 (270)
T ss_pred HHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcC-chHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCcc
Confidence 8888888888776544 7777999999999888776433 3799999888631 1
Q ss_pred cCCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 146 KWLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 146 ~~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
-|.+..++.|++++.++.|.-.-.++.+.++...+
T Consensus 200 l~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~ 234 (270)
T KOG4627|consen 200 LWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR 234 (270)
T ss_pred HHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh
Confidence 23466788999999999998777777777766544
No 177
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=98.26 E-value=1.1e-06 Score=101.86 Aligned_cols=94 Identities=23% Similarity=0.223 Sum_probs=78.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEE------EEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCC--ccc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVW------IIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGN--YHV 878 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~Vi------V~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~--~~v 878 (1027)
.|.||+|+|+|||.+|+..|.-++..|.+|+ ++|.+......|..+|+.+.+++++++.||+|+.+++. .+.
T Consensus 33 ~LkgKtIaIIGyGSqG~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPDt~q~~ 112 (487)
T PRK05225 33 YLKGKKIVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSD 112 (487)
T ss_pred HhCCCEEEEEccCHHHHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCChHHHHH
Confidence 4899999999999999999999999999988 44444445556777899999999999999999987653 345
Q ss_pred CcHHHHhcCCCCeEEEEecCCC
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d 900 (1027)
+..+.+..||+|+.|...-.|+
T Consensus 113 v~~~i~p~LK~Ga~L~fsHGFn 134 (487)
T PRK05225 113 VVRAVQPLMKQGAALGYSHGFN 134 (487)
T ss_pred HHHHHHhhCCCCCEEEecCCce
Confidence 6678899999999998876664
No 178
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=98.24 E-value=2.1e-06 Score=98.79 Aligned_cols=92 Identities=18% Similarity=0.159 Sum_probs=74.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-----HHH----h--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-----EYA----K--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-----~e~----l--~~aDvvi~atG 874 (1027)
..|++|+|.|.|.||..+++.++.+|+ +|++++.++.+...+...|.+ +.+. .+. . ...|+|++++|
T Consensus 175 ~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g 254 (358)
T TIGR03451 175 KRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVG 254 (358)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCC
Confidence 579999999999999999999999999 599999999888888888875 3321 111 1 14799999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
+...+. ..++.++++|+++.+|...
T Consensus 255 ~~~~~~-~~~~~~~~~G~iv~~G~~~ 279 (358)
T TIGR03451 255 RPETYK-QAFYARDLAGTVVLVGVPT 279 (358)
T ss_pred CHHHHH-HHHHHhccCCEEEEECCCC
Confidence 876555 4588999999999999864
No 179
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.24 E-value=6e-06 Score=91.57 Aligned_cols=92 Identities=18% Similarity=0.226 Sum_probs=77.3
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+.+ .++.+.||+|+|+|.|. +|+.+|..|...||.|++++..- -++.+.+++||||
T Consensus 141 cTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIv 206 (285)
T PRK10792 141 CTPRGIMTLLER-YGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT-------------KNLRHHVRNADLL 206 (285)
T ss_pred CCHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC-------------CCHHHHHhhCCEE
Confidence 355666655544 47789999999999999 99999999999999999996532 2577888999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.++++..+ .+|+|++++++|.-
T Consensus 207 i~avG~p~~v~~~---~vk~gavVIDvGin 233 (285)
T PRK10792 207 VVAVGKPGFIPGE---WIKPGAIVIDVGIN 233 (285)
T ss_pred EEcCCCcccccHH---HcCCCcEEEEcccc
Confidence 9999999999875 57999999999954
No 180
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=98.23 E-value=2.5e-06 Score=97.72 Aligned_cols=93 Identities=20% Similarity=0.174 Sum_probs=74.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCH--------HHHhc------cC----CE
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTM--------EYAKK------YG----DI 868 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~--------~e~l~------~a----Dv 868 (1027)
..|++|+|.|.|.+|..+++.++.+|++|++++.++.+...+...|++ +++. .+.+. .. |+
T Consensus 165 ~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~ 244 (349)
T TIGR03201 165 KKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWK 244 (349)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCE
Confidence 579999999999999999999999999999999999888888888875 2221 11111 23 48
Q ss_pred EEecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 869 FVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 869 vi~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
+++|+|+...+. ..++.++++|+++.+|....
T Consensus 245 v~d~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~ 276 (349)
T TIGR03201 245 IFECSGSKPGQE-SALSLLSHGGTLVVVGYTMA 276 (349)
T ss_pred EEECCCChHHHH-HHHHHHhcCCeEEEECcCCC
Confidence 999999876444 45889999999999998743
No 181
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=98.23 E-value=2e-06 Score=99.50 Aligned_cols=152 Identities=15% Similarity=0.095 Sum_probs=99.6
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-----HHHhc-----cCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-----EYAKK-----YGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-----~e~l~-----~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.||..+++.++.+|+ +|++++.++.+...+...|++ +.+. .+.+. ..|++++++|.
T Consensus 190 ~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~ 269 (371)
T cd08281 190 RPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGS 269 (371)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCC
Confidence 579999999999999999999999999 699999999998888888885 3321 11111 37999999997
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC--cccchhh--hhccceeccccceeee-ecCC-CcEEEEecCCccccccCCCCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD--NEIEVEK--LKKYKWENIKPQVDHI-IFPD-GKKIILLAEGRLVNLGCGTGHP 949 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d--~eid~~~--l~~~~~~~~~~~v~~y-~~~d-g~~i~LLa~GrlvNl~~~~G~P 949 (1027)
...+. ..++.+++++.++.+|... ..++++. +...+..........+ ...+ .+.+.++++|++ .+
T Consensus 270 ~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i--------~~ 340 (371)
T cd08281 270 VPALE-TAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRL--------PV 340 (371)
T ss_pred hHHHH-HHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCC--------Cc
Confidence 66444 4589999999999999753 2233332 2111111111110000 0001 245566777776 45
Q ss_pred cceEehhhHhHHHHHHHHh
Q psy15208 950 SYVMSSSFANQTLAQIELF 968 (1027)
Q Consensus 950 ~~vmd~sf~~q~la~~~l~ 968 (1027)
..+++..|.+..+.+.+-.
T Consensus 341 ~~~i~~~~~l~~~~~A~~~ 359 (371)
T cd08281 341 DKLLTHRLPLDEINEGFDR 359 (371)
T ss_pred hhheeeeecHHHHHHHHHH
Confidence 5566777777666665543
No 182
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=98.22 E-value=5.3e-06 Score=85.69 Aligned_cols=79 Identities=25% Similarity=0.357 Sum_probs=68.9
Q ss_pred CccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHH
Q psy15208 805 DVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDH 883 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~ 883 (1027)
...+.||+|+|+|+|. +|+.+|+.|...|++|++++++. ..+.+.+.++|+||+|||.+++++.++
T Consensus 39 ~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-------------~~l~~~l~~aDiVIsat~~~~ii~~~~ 105 (168)
T cd01080 39 GIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-------------KNLKEHTKQADIVIVAVGKPGLVKGDM 105 (168)
T ss_pred CCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-------------hhHHHHHhhCCEEEEcCCCCceecHHH
Confidence 3468999999999998 69999999999999999997653 245678899999999999988999875
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
++++.+++++|..
T Consensus 106 ---~~~~~viIDla~p 118 (168)
T cd01080 106 ---VKPGAVVIDVGIN 118 (168)
T ss_pred ---ccCCeEEEEccCC
Confidence 6889999999986
No 183
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.22 E-value=8e-06 Score=88.39 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=68.9
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHh--------CCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS--------LGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKY 104 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~--------~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~ 104 (1027)
+.+|||+||. +|+.. .++.++..+.+ ..++++++|+......-. ........+.+...++.+...+
T Consensus 4 g~pVlFIhG~---~Gs~~--q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 4 GIPVLFIHGN---AGSYK--QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-GRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCEEEEECcC---CCCHh--HHHHHHHHHhhhhhhccCccceeEEEeccCccccccc-cccHHHHHHHHHHHHHHHHHhh
Confidence 4678999996 55554 35566655522 258899999976432211 1122233444555556665544
Q ss_pred -----CCCcEEEEEechhHHHHHHHHHhcCC-cCCccEEEEEccCC
Q psy15208 105 -----PYLPIILAGFSFGTFVQAKLQKRLDK-EISIKILILISVAV 144 (1027)
Q Consensus 105 -----~~~pviLVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~ 144 (1027)
+..+++|+||||||.++..+....+. ...++.+|.++.|.
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 55689999999999999888876542 22689999998764
No 184
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.22 E-value=7.5e-05 Score=83.74 Aligned_cols=151 Identities=24% Similarity=0.291 Sum_probs=101.0
Q ss_pred eEEEEEecCCceEEEEEE-ecCCccccCCccEEEEECCCCCCCCCCChHHH-----HHHHHHHHhCCcEEEEEcCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAIN-FPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVV-----QTLVRVMLSLGYISIRMNFRGVGA 78 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~-~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~-----~~la~~La~~Gy~Vla~DlrGhG~ 78 (1027)
.+++.|...+-.|.+... .|.. .+...+|++-|. ++.+++... ..|.+..-..|.+|+.+++||.|.
T Consensus 112 ~kRv~Iq~D~~~IDt~~I~~~~a----~~~RWiL~s~GN---g~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~ 184 (365)
T PF05677_consen 112 VKRVPIQYDGVKIDTMAIHQPEA----KPQRWILVSNGN---GECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGS 184 (365)
T ss_pred eeeEEEeeCCEEEEEEEeeCCCC----CCCcEEEEEcCC---hHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCcccc
Confidence 456777774446666543 3443 456788999996 445554211 123333334588999999999999
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCCC--------
Q psy15208 79 SSGTYDSGNGETDDMEILLRYIQKKYP---YLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAVK-------- 145 (1027)
Q Consensus 79 S~g~~~~~~~~~~Dv~avl~~L~~~~~---~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~~-------- 145 (1027)
|.|.. +...++.|..+.+++|+++.. ...+++.|||+||.++..+..++... ..++-+++-+-.+.
T Consensus 185 S~G~~-s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~~vas~ 263 (365)
T PF05677_consen 185 STGPP-SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLAAVASQ 263 (365)
T ss_pred CCCCC-CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHHHHHHH
Confidence 99985 568899999999999987432 24699999999999998866654321 12444554443221
Q ss_pred -------------cC------CCCCCCCcEEEEEeCC
Q psy15208 146 -------------KW------LIPEVPKNTIIIHGEL 163 (1027)
Q Consensus 146 -------------~~------~l~~i~~PvLiIhG~~ 163 (1027)
.| ....+.||-+++|+.+
T Consensus 264 ~~~~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 264 FFGPIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVD 300 (365)
T ss_pred HHHHHHHHHHHHhccCCCchhhhccCCCCeEEEeccc
Confidence 12 1456779999999874
No 185
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.21 E-value=6.1e-06 Score=92.23 Aligned_cols=91 Identities=24% Similarity=0.270 Sum_probs=76.5
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCC-hhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYG-DVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G-~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+ +..++.+.||+|+|+|.| -+|+.+|..|...|+.|++++.... ++.+..++||+||
T Consensus 142 Tp~aii~lL-~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------~l~e~~~~ADIVI 207 (301)
T PRK14194 142 TPSGCLRLL-EDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------DAKALCRQADIVV 207 (301)
T ss_pred cHHHHHHHH-HHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-------------CHHHHHhcCCEEE
Confidence 445555444 445778999999999997 8999999999999999999976532 5788889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+++|.++.+.... +|+|++++++|.-
T Consensus 208 savg~~~~v~~~~---ik~GaiVIDvgin 233 (301)
T PRK14194 208 AAVGRPRLIDADW---LKPGAVVIDVGIN 233 (301)
T ss_pred EecCChhcccHhh---ccCCcEEEEeccc
Confidence 9999999888764 8999999999964
No 186
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.21 E-value=6e-06 Score=91.59 Aligned_cols=92 Identities=28% Similarity=0.357 Sum_probs=77.6
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+.+ .++.+.||+|+|+|.|. +|+.+|..|...||.|++++..- -++.+..++||+|
T Consensus 146 cTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIv 211 (287)
T PRK14176 146 CTPHGVIRALEE-YGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT-------------DDLKKYTLDADIL 211 (287)
T ss_pred CcHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC-------------CCHHHHHhhCCEE
Confidence 355666655544 47789999999999999 99999999999999999997432 2567788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.++.++.+ ++|+|++++++|.-
T Consensus 212 v~AvG~p~~i~~~---~vk~gavVIDvGin 238 (287)
T PRK14176 212 VVATGVKHLIKAD---MVKEGAVIFDVGIT 238 (287)
T ss_pred EEccCCccccCHH---HcCCCcEEEEeccc
Confidence 9999999999866 58999999999984
No 187
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.20 E-value=5.4e-06 Score=88.60 Aligned_cols=103 Identities=22% Similarity=0.316 Sum_probs=74.6
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEe
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGF 114 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGh 114 (1027)
.|+++|+. +|+. ..|..+++.|....+.|+.++++|++.......+.+.++ ...++.+....+..|+.|+||
T Consensus 2 ~lf~~p~~---gG~~--~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la---~~y~~~I~~~~~~gp~~L~G~ 73 (229)
T PF00975_consen 2 PLFCFPPA---GGSA--SSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELA---SRYAEAIRARQPEGPYVLAGW 73 (229)
T ss_dssp EEEEESST---TCSG--GGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHH---HHHHHHHHHHTSSSSEEEEEE
T ss_pred eEEEEcCC---ccCH--HHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHH---HHHHHHhhhhCCCCCeeehcc
Confidence 57999996 3332 368899999976459999999999984433333434444 345566666656669999999
Q ss_pred chhHHHHHHHHHhcCC-cCCccEEEEEccCCC
Q psy15208 115 SFGTFVQAKLQKRLDK-EISIKILILISVAVK 145 (1027)
Q Consensus 115 SmGG~vAl~~A~~~p~-~~~V~gLVli~p~~~ 145 (1027)
|+||.+|+.+|.+..+ ...+..+++++++++
T Consensus 74 S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 74 SFGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp THHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred CccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 9999999999987543 235889999986554
No 188
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=98.20 E-value=4.9e-06 Score=94.43 Aligned_cols=93 Identities=26% Similarity=0.352 Sum_probs=74.9
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch-hHHHHhhcCcEEcCHHHHhccCCEEEecCCCc---ccCcHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI-CALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY---HVITHD 882 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~-r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~---~vi~~~ 882 (1027)
.+.|++|+|||+|.+|+++|+.|+..|.+|++.+.++. ....+...|+.+.+.+++++.+|+|+.++... .++..+
T Consensus 14 ~L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~~ 93 (330)
T PRK05479 14 LIKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEEE 93 (330)
T ss_pred hhCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHHH
Confidence 47899999999999999999999999999998876543 33456678998889999999999999988643 444455
Q ss_pred HHhcCCCCeEEEEecCC
Q psy15208 883 HMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~ 899 (1027)
.+..|++|.+|+.+..+
T Consensus 94 I~~~Lk~g~iL~~a~G~ 110 (330)
T PRK05479 94 IEPNLKEGAALAFAHGF 110 (330)
T ss_pred HHhcCCCCCEEEECCCC
Confidence 56789999988554443
No 189
>KOG2551|consensus
Probab=98.20 E-value=2.5e-05 Score=82.59 Aligned_cols=147 Identities=22% Similarity=0.179 Sum_probs=97.4
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCC------CCCCCC-----C----------C-------
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRG------VGASSG-----T----------Y------- 83 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrG------hG~S~g-----~----------~------- 83 (1027)
.++-||++||+.+.+..+.. ....|.+.|.+. +..+.+|-|- .-.+.+ . +
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~-Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSE-KTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecchhhccHHHHH-HhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 45678999999875544432 233466666554 7778877762 111111 0 0
Q ss_pred -CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc------CCcCCccEEEEEccCCCc-------CCC
Q psy15208 84 -DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL------DKEISIKILILISVAVKK-------WLI 149 (1027)
Q Consensus 84 -~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~------p~~~~V~gLVli~p~~~~-------~~l 149 (1027)
......-..+..+.+++.++.|- -.|+|+|+|+.++..++... .+.+.++-+|++++.... ...
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGPF--DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~~~~~ 159 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGPF--DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDESAYK 159 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCCC--ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhhhhhc
Confidence 01112333456666667666554 38999999999998888721 123457888988876543 135
Q ss_pred CCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 150 PEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 150 ~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
+.+++|.|.+.|+.|.++|...+..+++.....
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a 192 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDA 192 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCC
Confidence 688999999999999999999998888876655
No 190
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=98.19 E-value=1.1e-06 Score=97.49 Aligned_cols=91 Identities=18% Similarity=0.183 Sum_probs=74.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCHH---HHh------ccCCEEEecCCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTME---YAK------KYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~~---e~l------~~aDvvi~atG~~ 876 (1027)
..|++|+|+|.|.||..+++.++.+|++ |++++.++.|...+...|++ +.+.. +.+ ..+|++++++|..
T Consensus 119 ~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~ 198 (280)
T TIGR03366 119 LKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGAT 198 (280)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCCh
Confidence 4899999999999999999999999996 99999999898888888885 33321 111 1479999999987
Q ss_pred ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
..+. ..++.+++++.++.+|..
T Consensus 199 ~~~~-~~~~~l~~~G~iv~~G~~ 220 (280)
T TIGR03366 199 AAVR-ACLESLDVGGTAVLAGSV 220 (280)
T ss_pred HHHH-HHHHHhcCCCEEEEeccC
Confidence 6555 458999999999999964
No 191
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.19 E-value=6.4e-06 Score=98.24 Aligned_cols=135 Identities=19% Similarity=0.226 Sum_probs=104.4
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEEC--CCCCCCCCCChHHHHHHHH---HHHhCCcEEEEEcCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAH--PHPLFGGTMDNKVVQTLVR---VMLSLGYISIRMNFRGVG 77 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllH--G~~~~gGs~~~~~~~~la~---~La~~Gy~Vla~DlrGhG 77 (1027)
..+.+.++..|| +|+.-+|.|++ .++.|+++..+ ...-..+.+.. ...... .|+.+||.|+..|.||.|
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~---~g~~Pvll~~~~~Py~k~~~~~~~--~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAG---AGPLPVLLSRTRLPYRKRNGTFGP--QLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCC---CCCCceeEEeeccccccccccCcc--hhhcccccceeecCceEEEEecccccc
Confidence 345688999999 89999999997 47889999888 43221111111 122334 688899999999999999
Q ss_pred CCCCCCCCccc-hHHHHHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 78 ASSGTYDSGNG-ETDDMEILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 78 ~S~g~~~~~~~-~~~Dv~avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.|+|.+..+.. .++|.-..++|+..+ ..+.+|..+|.|++|...+.+|+..|. .+++++...+...
T Consensus 93 ~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--aLkai~p~~~~~D 160 (563)
T COG2936 93 GSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--ALKAIAPTEGLVD 160 (563)
T ss_pred cCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--hheeecccccccc
Confidence 99998755555 889999999999875 234479999999999999999999887 5788887777654
No 192
>PLN02740 Alcohol dehydrogenase-like
Probab=98.19 E-value=2.9e-06 Score=98.63 Aligned_cols=93 Identities=23% Similarity=0.332 Sum_probs=75.5
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-------HHHHhc-----cCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-------MEYAKK-----YGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------~~e~l~-----~aDvvi~a 872 (1027)
...|++|+|+|.|.||..+++.++.+|+ +|++++.++.+...+...|++ +++ ..+.+. ..|+++++
T Consensus 196 ~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~ 275 (381)
T PLN02740 196 VQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFEC 275 (381)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 3579999999999999999999999999 699999999998888888875 332 122221 48999999
Q ss_pred CCCcccCcHHHHhcCCCC-eEEEEecCCC
Q psy15208 873 TGNYHVITHDHMRDMKDQ-AIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~g-ailvNvG~~d 900 (1027)
+|....+. ..+..++++ |+++.+|...
T Consensus 276 ~G~~~~~~-~a~~~~~~g~G~~v~~G~~~ 303 (381)
T PLN02740 276 AGNVEVLR-EAFLSTHDGWGLTVLLGIHP 303 (381)
T ss_pred CCChHHHH-HHHHhhhcCCCEEEEEccCC
Confidence 99876555 458889886 9999999864
No 193
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.18 E-value=3.8e-06 Score=89.91 Aligned_cols=146 Identities=20% Similarity=0.174 Sum_probs=72.3
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCC-----CCC------------C------CCCC---
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVG-----ASS------------G------TYDS--- 85 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG-----~S~------------g------~~~~--- 85 (1027)
.++-||++||+++++.-+. .....+.+.|.+.++..+.+|-|--- -.. . ....
T Consensus 3 ~k~riLcLHG~~~na~if~-~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFR-QQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HHHHH-HHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHHHHH-HHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 3677999999854322111 12335666665547888888864221 110 0 0011
Q ss_pred -ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcC------CcCCccEEEEEccCCCcC-------CCCC
Q psy15208 86 -GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLD------KEISIKILILISVAVKKW-------LIPE 151 (1027)
Q Consensus 86 -~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p------~~~~V~gLVli~p~~~~~-------~l~~ 151 (1027)
.....+.+..+.+++.+..| -..++|+|+||.+|..++.... ....++.+|++++..+.. ....
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~~~~~~~ 159 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQELYDEPK 159 (212)
T ss_dssp GG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTTTT--TT
T ss_pred cccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhhhhcccc
Confidence 12233334445555555533 2589999999999988876432 123578899998765431 2456
Q ss_pred CCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 152 VPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 152 i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
+.+|+|.++|.+|.+++++.+..+.+...
T Consensus 160 i~iPtlHv~G~~D~~~~~~~s~~L~~~~~ 188 (212)
T PF03959_consen 160 ISIPTLHVIGENDPVVPPERSEALAEMFD 188 (212)
T ss_dssp ---EEEEEEETT-SSS-HHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCCCCcchHHHHHHHHhcc
Confidence 78999999999999999888876665443
No 194
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.17 E-value=1.9e-05 Score=87.98 Aligned_cols=109 Identities=14% Similarity=0.156 Sum_probs=72.9
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC----CCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKY----PYL 107 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~----~~~ 107 (1027)
++.+|||+.|.+. |-....+...+++.|...||.++-+.++-.-.-.| ..+.+..++|+.+++++|+... ...
T Consensus 32 ~~~~llfIGGLtD--Gl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G-~~SL~~D~~eI~~~v~ylr~~~~g~~~~~ 108 (303)
T PF08538_consen 32 APNALLFIGGLTD--GLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWG-TSSLDRDVEEIAQLVEYLRSEKGGHFGRE 108 (303)
T ss_dssp SSSEEEEE--TT----TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS--S--HHHHHHHHHHHHHHHHHHS------S
T ss_pred CCcEEEEECCCCC--CCCCCchHHHHHHHhccCCeEEEEEEecCccCCcC-cchhhhHHHHHHHHHHHHHHhhccccCCc
Confidence 4668999999853 33334577889999987899999998853111111 2345667999999999999873 456
Q ss_pred cEEEEEechhHHHHHHHHHhcCC---cCCccEEEEEccC
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDK---EISIKILILISVA 143 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~---~~~V~gLVli~p~ 143 (1027)
+|+|+|||-|+.-.+.+...... ...|++.|+-+|.
T Consensus 109 kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApV 147 (303)
T PF08538_consen 109 KIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPV 147 (303)
T ss_dssp -EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE-
T ss_pred cEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCC
Confidence 89999999999999999987643 3479999999984
No 195
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=98.17 E-value=5.9e-06 Score=86.43 Aligned_cols=92 Identities=20% Similarity=0.223 Sum_probs=71.4
Q ss_pred CccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcCcE-E--cC----HHHHhccCCEEEecCCC
Q psy15208 805 DVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEGFL-V--VT----MEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G~~-v--~~----~~e~l~~aDvvi~atG~ 875 (1027)
++.+.||+|+|+|-+. +|+-+|..|...||.|+++|.+.+.... ...+... . .+ +.+.+++|||||.|+|.
T Consensus 57 ~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~ 136 (197)
T cd01079 57 GNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPS 136 (197)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCC
Confidence 3479999999999999 9999999999999999999865532210 0000011 1 12 56778999999999999
Q ss_pred ccc-CcHHHHhcCCCCeEEEEecCC
Q psy15208 876 YHV-ITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 876 ~~v-i~~~~~~~mk~gailvNvG~~ 899 (1027)
+++ +..+. +|+|+++|++|..
T Consensus 137 ~~~~i~~d~---ik~GavVIDVGi~ 158 (197)
T cd01079 137 PNYKVPTEL---LKDGAICINFASI 158 (197)
T ss_pred CCCccCHHH---cCCCcEEEEcCCC
Confidence 998 88764 7999999999986
No 196
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.16 E-value=7.9e-06 Score=90.65 Aligned_cols=91 Identities=26% Similarity=0.296 Sum_probs=75.3
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCC-hhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYG-DVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G-~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+ +..++.+.||+|+|+|.| -+|+.+|..|...||.|++++... -++.+.+++||+||
T Consensus 140 Tp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t-------------~~l~~~~~~ADIvV 205 (285)
T PRK14191 140 TPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT-------------KDLSFYTQNADIVC 205 (285)
T ss_pred cHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc-------------HHHHHHHHhCCEEE
Confidence 445555444 445778999999999999 599999999999999999995432 23567789999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 206 ~AvG~p~~i~~~~---vk~GavVIDvGi~ 231 (285)
T PRK14191 206 VGVGKPDLIKASM---VKKGAVVVDIGIN 231 (285)
T ss_pred EecCCCCcCCHHH---cCCCcEEEEeecc
Confidence 9999999999875 5999999999974
No 197
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=98.16 E-value=3.8e-06 Score=96.43 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=75.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcC---CchhHHHHhhcCcEEcCHHH-------HhccCCEEEecCCCcc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEI---DPICALQAAMEGFLVVTMEY-------AKKYGDIFVTCTGNYH 877 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~---dp~r~~~A~~~G~~v~~~~e-------~l~~aDvvi~atG~~~ 877 (1027)
..|++|+|+|.|.||+.+++.|+..|++|++++. ++.+...+...|++.++..+ .....|+||+++|...
T Consensus 171 ~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 250 (355)
T cd08230 171 WNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVPP 250 (355)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCHH
Confidence 4799999999999999999999999999999987 67787788888987543211 1234799999999765
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.+. +.++.|+++|.++.+|...
T Consensus 251 ~~~-~~~~~l~~~G~~v~~G~~~ 272 (355)
T cd08230 251 LAF-EALPALAPNGVVILFGVPG 272 (355)
T ss_pred HHH-HHHHHccCCcEEEEEecCC
Confidence 444 5689999999999999864
No 198
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.16 E-value=6.6e-06 Score=95.64 Aligned_cols=125 Identities=19% Similarity=0.253 Sum_probs=71.5
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCC------CC-----C-------------CCCc
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGAS------SG-----T-------------YDSG 86 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S------~g-----~-------------~~~~ 86 (1027)
...|+|||.||++ |+.. .+..++..||++||-|+++|.|..-.+ ++ . +...
T Consensus 98 ~~~PvvIFSHGlg---g~R~--~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T PF03403_consen 98 GKFPVVIFSHGLG---GSRT--SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDF 172 (379)
T ss_dssp S-EEEEEEE--TT-----TT--TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE----
T ss_pred CCCCEEEEeCCCC---cchh--hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccc
Confidence 4689999999984 4433 377899999999999999999954211 00 0 0000
Q ss_pred -------------cchHHHHHHHHHHHHHhC----------------------CCCcEEEEEechhHHHHHHHHHhcCCc
Q psy15208 87 -------------NGETDDMEILLRYIQKKY----------------------PYLPIILAGFSFGTFVQAKLQKRLDKE 131 (1027)
Q Consensus 87 -------------~~~~~Dv~avl~~L~~~~----------------------~~~pviLVGhSmGG~vAl~~A~~~p~~ 131 (1027)
+..+.|+..+++.+.... +..+++++|||+||+.++.++.+..
T Consensus 173 ~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~-- 250 (379)
T PF03403_consen 173 DPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT-- 250 (379)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T--
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc--
Confidence 012455556666665310 1135999999999999999888763
Q ss_pred CCccEEEEEccCCCcC---CCCCCCCcEEEEEeCC
Q psy15208 132 ISIKILILISVAVKKW---LIPEVPKNTIIIHGEL 163 (1027)
Q Consensus 132 ~~V~gLVli~p~~~~~---~l~~i~~PvLiIhG~~ 163 (1027)
++++.|+++|...+. ....++.|+|+|+.+.
T Consensus 251 -r~~~~I~LD~W~~Pl~~~~~~~i~~P~L~InSe~ 284 (379)
T PF03403_consen 251 -RFKAGILLDPWMFPLGDEIYSKIPQPLLFINSES 284 (379)
T ss_dssp -T--EEEEES---TTS-GGGGGG--S-EEEEEETT
T ss_pred -CcceEEEeCCcccCCCcccccCCCCCEEEEECcc
Confidence 589999999864322 2356789999998875
No 199
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.13 E-value=9.5e-06 Score=89.91 Aligned_cols=91 Identities=33% Similarity=0.389 Sum_probs=76.4
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+ +..++.+.||+|+|+|.+. +|+-+|..|...||.|++++..- -++.+.+++|||||
T Consensus 140 Tp~avi~lL-~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T-------------~~l~~~~~~ADIvI 205 (284)
T PRK14170 140 TPAGIIELI-KSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRT-------------KDLPQVAKEADILV 205 (284)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEE
Confidence 445554443 4457889999999999999 99999999999999999995432 35678889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|..
T Consensus 206 ~AvG~~~~i~~~~---vk~GavVIDvGin 231 (284)
T PRK14170 206 VATGLAKFVKKDY---IKPGAIVIDVGMD 231 (284)
T ss_pred EecCCcCccCHHH---cCCCCEEEEccCc
Confidence 9999999999774 7999999999986
No 200
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.13 E-value=1.1e-05 Score=89.56 Aligned_cols=92 Identities=29% Similarity=0.356 Sum_probs=77.1
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|+++...- .++.+..++||||
T Consensus 138 cTp~avi~lL~-~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T-------------~~l~~~~~~ADIv 203 (282)
T PRK14169 138 STPYGIMALLD-AYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKT-------------RNLKQLTKEADIL 203 (282)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCC-------------CCHHHHHhhCCEE
Confidence 34555555444 447789999999999999 99999999999999999995432 2567788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.+++++.++ +|+|++++++|.-
T Consensus 204 I~AvG~p~~i~~~~---vk~GavVIDvGin 230 (282)
T PRK14169 204 VVAVGVPHFIGADA---VKPGAVVIDVGIS 230 (282)
T ss_pred EEccCCcCccCHHH---cCCCcEEEEeecc
Confidence 99999999999774 7999999999985
No 201
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.13 E-value=1.6e-05 Score=82.92 Aligned_cols=161 Identities=19% Similarity=0.304 Sum_probs=108.1
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEe
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGF 114 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGh 114 (1027)
.+||+-|- +|+ .. .=..+++.|+++|+.|+.+|-+-+=.+.+ +.++.+.|+..++++...+...++++|+|+
T Consensus 4 ~~v~~SGD---gGw-~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r---tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 4 LAVFFSGD---GGW-RD-LDKQIAEALAKQGVPVVGVDSLRYFWSER---TPEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEeCC---CCc-hh-hhHHHHHHHHHCCCeEEEechHHHHhhhC---CHHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 56777773 333 21 23578999999999999999875554543 335689999999999999988889999999
Q ss_pred chhHHHHHHHHHhcCC--cCCccEEEEEccCCC--------cCC--------------CCCCC-CcEEEEEeCCCCCCCh
Q psy15208 115 SFGTFVQAKLQKRLDK--EISIKILILISVAVK--------KWL--------------IPEVP-KNTIIIHGELDEIIPL 169 (1027)
Q Consensus 115 SmGG~vAl~~A~~~p~--~~~V~gLVli~p~~~--------~~~--------------l~~i~-~PvLiIhG~~D~iVP~ 169 (1027)
|+|+-+...+..+.|+ +.+|+.+++++|... .|+ +.+++ .|++.|+|.++.-.+.
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~E~d~~c 155 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGEDEDDSLC 155 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCCCCCCcC
Confidence 9999888888877775 346999999998643 111 22333 5899999998854222
Q ss_pred HHHHhhhCCCCCceEeeccccCCCCccccchhhhhhHHHHH
Q psy15208 170 KDVFLWANPLDIPVVVIPESVSEGHPDKIADQISDAILDEI 210 (1027)
Q Consensus 170 ~~~~~l~~~~~~~~L~t~Esv~~GHPdkvaDqIsdaILD~~ 210 (1027)
. .+.. .....+..+.. .|-+.-.+.++..|++.+
T Consensus 156 p---~l~~-~~~~~i~lpGg---HHfd~dy~~La~~Il~~l 189 (192)
T PF06057_consen 156 P---SLRQ-PGVEVIALPGG---HHFDGDYDALAKRILDAL 189 (192)
T ss_pred c---cccC-CCcEEEEcCCC---cCCCCCHHHHHHHHHHHH
Confidence 1 1111 12233333331 233444555666666543
No 202
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.12 E-value=1.1e-05 Score=89.67 Aligned_cols=91 Identities=25% Similarity=0.372 Sum_probs=77.1
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|++++... .++.+.+++|||||
T Consensus 141 Tp~av~~lL~-~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t-------------~~l~~~~~~ADIvI 206 (284)
T PRK14190 141 TPHGILELLK-EYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT-------------KNLAELTKQADILI 206 (284)
T ss_pred CHHHHHHHHH-HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc-------------hhHHHHHHhCCEEE
Confidence 4555554444 457789999999999999 99999999999999999996432 35778889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|..
T Consensus 207 ~AvG~p~~i~~~~---ik~gavVIDvGi~ 232 (284)
T PRK14190 207 VAVGKPKLITADM---VKEGAVVIDVGVN 232 (284)
T ss_pred EecCCCCcCCHHH---cCCCCEEEEeecc
Confidence 9999999999886 5999999999986
No 203
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.12 E-value=1.5e-05 Score=90.34 Aligned_cols=155 Identities=17% Similarity=0.207 Sum_probs=107.4
Q ss_pred CCceEEEEEEecCCcc---ccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC--CCCCCCC----
Q psy15208 13 SVGILHCAINFPSSIK---LLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV--GASSGTY---- 83 (1027)
Q Consensus 13 ~dG~I~~~l~~P~~~~---~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh--G~S~g~~---- 83 (1027)
.++++...+|.|.... .....|+|++.||.+ ++..+ +..+++.|++.||.|.++|.+|. |+.+..+
T Consensus 48 r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~G---s~~~~--f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~ 122 (365)
T COG4188 48 RDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSG---SYVTG--FAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPG 122 (365)
T ss_pred cCCccccceeccCCCccccccCcCCeEEecCCCC---CCccc--hhhhHHHHhhCceEEEeccCCCcccccCChhhcCCc
Confidence 3457888888886521 113679999999974 44443 56699999999999999999984 4433221
Q ss_pred ----CCccchHHHHHHHHHHHHHh-----C----CCCcEEEEEechhHHHHHHHHHhcCC--------------------
Q psy15208 84 ----DSGNGETDDMEILLRYIQKK-----Y----PYLPIILAGFSFGTFVQAKLQKRLDK-------------------- 130 (1027)
Q Consensus 84 ----~~~~~~~~Dv~avl~~L~~~-----~----~~~pviLVGhSmGG~vAl~~A~~~p~-------------------- 130 (1027)
..+.+...|+..++++|.+. . ...+|.++|||+||+.++.++....+
T Consensus 123 ~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~ 202 (365)
T COG4188 123 SYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPG 202 (365)
T ss_pred ccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCC
Confidence 11235678888888888775 1 23479999999999999887632211
Q ss_pred ----------------------cCCccEEEEEccCCCcC----CCCCCCCcEEEEEeCCCCCCChHHH
Q psy15208 131 ----------------------EISIKILILISVAVKKW----LIPEVPKNTIIIHGELDEIIPLKDV 172 (1027)
Q Consensus 131 ----------------------~~~V~gLVli~p~~~~~----~l~~i~~PvLiIhG~~D~iVP~~~~ 172 (1027)
..++++++...|....- -+..++.|++++.|..|.+.|+..-
T Consensus 203 ~~~~~l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~ 270 (365)
T COG4188 203 LNGRLLNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTE 270 (365)
T ss_pred cChhhhccccccccchhhhccccccceeeeeccCCcccccccccceeeecceeeecccccccCCcccc
Confidence 01355555555543321 2667889999999999998877653
No 204
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=98.11 E-value=1e-05 Score=83.55 Aligned_cols=92 Identities=22% Similarity=0.280 Sum_probs=69.1
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE---Ec------------------------CH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL---VV------------------------TM 859 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~---v~------------------------~~ 859 (1027)
.+...+|+|+|.|.+|++.++.|+++|++|++.|.++.+..+....+.. +. .+
T Consensus 17 ~~~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 96 (168)
T PF01262_consen 17 GVPPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF 96 (168)
T ss_dssp EE-T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred CCCCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence 3677999999999999999999999999999999999877766665554 21 13
Q ss_pred HHHhccCCEEEecC-----CCcccCcHHHHhcCCCCeEEEEecC
Q psy15208 860 EYAKKYGDIFVTCT-----GNYHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 860 ~e~l~~aDvvi~at-----G~~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
.+.++.+|+||.+. ..+.++++++++.||++.+++.+.-
T Consensus 97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 45566799998632 3567999999999999999998843
No 205
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=98.11 E-value=5.9e-06 Score=96.01 Aligned_cols=147 Identities=12% Similarity=0.046 Sum_probs=96.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchh-HHHHhhcCcE-EcCH------HHHhccCCEEEecCCCcccC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPIC-ALQAAMEGFL-VVTM------EYAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r-~~~A~~~G~~-v~~~------~e~l~~aDvvi~atG~~~vi 879 (1027)
..|++|+|.|.|.||..+++.++.+|++|++++.++.+ ...+...|++ +++. .+.....|++++++|+...+
T Consensus 177 ~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~ 256 (375)
T PLN02178 177 ESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHAL 256 (375)
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCcEEEECCCcHHHH
Confidence 47999999999999999999999999999998876544 4556677875 3221 12223479999999987544
Q ss_pred cHHHHhcCCCCeEEEEecCCCc--ccchhhhhccceeccccceeeeecCC-CcEEEEecCCccccccCCCCCCcceEehh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDN--EIEVEKLKKYKWENIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYVMSSS 956 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~--eid~~~l~~~~~~~~~~~v~~y~~~d-g~~i~LLa~GrlvNl~~~~G~P~~vmd~s 956 (1027)
. ..++.++++|.++.+|.... +++...+...+........ +...+ .+.+.++++|++ .|. + ..
T Consensus 257 ~-~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~l~~~g~i--------~~~-i--~~ 322 (375)
T PLN02178 257 L-PLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQI--GGMKETQEMLEFCAKHKI--------VSD-I--EL 322 (375)
T ss_pred H-HHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCc--cCHHHHHHHHHHHHhCCC--------ccc-E--EE
Confidence 4 45899999999999997643 3444433222222111111 11112 357778888887 332 3 24
Q ss_pred hHhHHHHHHHHh
Q psy15208 957 FANQTLAQIELF 968 (1027)
Q Consensus 957 f~~q~la~~~l~ 968 (1027)
|.+..+...+-.
T Consensus 323 ~~l~~~~~A~~~ 334 (375)
T PLN02178 323 IKMSDINSAMDR 334 (375)
T ss_pred EeHHHHHHHHHH
Confidence 666666665544
No 206
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.11 E-value=1.2e-05 Score=89.08 Aligned_cols=92 Identities=23% Similarity=0.354 Sum_probs=77.2
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+.+ .++.+.||+|+|+|-+. +|+-+|..|...||.|++++..- -++.+..++||||
T Consensus 139 cTp~avi~lL~~-y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T-------------~nl~~~~~~ADIv 204 (282)
T PRK14166 139 CTPLGVMKLLKA-YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-------------KDLSLYTRQADLI 204 (282)
T ss_pred CCHHHHHHHHHH-hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEE
Confidence 345555554444 47789999999999999 99999999999999999996532 3577788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.+++++.++ +|+|++++++|.-
T Consensus 205 IsAvGkp~~i~~~~---vk~GavVIDvGin 231 (282)
T PRK14166 205 IVAAGCVNLLRSDM---VKEGVIVVDVGIN 231 (282)
T ss_pred EEcCCCcCccCHHH---cCCCCEEEEeccc
Confidence 99999999999774 7999999999974
No 207
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=98.11 E-value=3.5e-06 Score=95.39 Aligned_cols=91 Identities=19% Similarity=0.225 Sum_probs=77.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-H-H---HHh-ccCCEEEecCCCcccCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-M-E---YAK-KYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-~-~---e~l-~~aDvvi~atG~~~vi~ 880 (1027)
-+|++|+|+|+|.+|...+|.|+++||+|+++++++.++..|..+|.+ +.+ . + +.+ ..+|+++++.+ ...++
T Consensus 165 ~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-~~~~~ 243 (339)
T COG1064 165 KPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG-PATLE 243 (339)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEECCC-hhhHH
Confidence 579999999999999999999999999999999999999999999987 222 1 1 222 23999999998 66566
Q ss_pred HHHHhcCCCCeEEEEecCCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d 900 (1027)
..++.||++|.++-+|...
T Consensus 244 -~~l~~l~~~G~~v~vG~~~ 262 (339)
T COG1064 244 -PSLKALRRGGTLVLVGLPG 262 (339)
T ss_pred -HHHHHHhcCCEEEEECCCC
Confidence 4599999999999999984
No 208
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.09 E-value=1.6e-05 Score=88.24 Aligned_cols=91 Identities=20% Similarity=0.272 Sum_probs=76.6
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.- ++..++.+.||+|+|+|.+. +|+-+|..|...||.|++++..- -++.+..++|||||
T Consensus 142 Tp~avi~l-l~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T-------------~~l~~~~~~ADIvI 207 (284)
T PRK14177 142 TPYGMVLL-LKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKT-------------QNLPSIVRQADIIV 207 (284)
T ss_pred CHHHHHHH-HHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEE
Confidence 45555554 34457789999999999999 99999999999999999996432 35677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 208 sAvGk~~~i~~~~---ik~gavVIDvGin 233 (284)
T PRK14177 208 GAVGKPEFIKADW---ISEGAVLLDAGYN 233 (284)
T ss_pred EeCCCcCccCHHH---cCCCCEEEEecCc
Confidence 9999999999774 7999999999984
No 209
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.09 E-value=1.3e-05 Score=89.00 Aligned_cols=91 Identities=21% Similarity=0.236 Sum_probs=76.2
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..- .+..++.+.||+|+|+|-+. +|+-+|..|...||.|++++.. ..++.+..++|||||
T Consensus 142 Tp~av~~l-L~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~-------------T~~L~~~~~~ADIvV 207 (288)
T PRK14171 142 TALGCLAV-IKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSK-------------THNLSSITSKADIVV 207 (288)
T ss_pred CHHHHHHH-HHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC-------------CCCHHHHHhhCCEEE
Confidence 44555444 44458889999999999999 9999999999999999999642 235778889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 208 ~AvGkp~~i~~~~---vk~GavVIDvGin 233 (288)
T PRK14171 208 AAIGSPLKLTAEY---FNPESIVIDVGIN 233 (288)
T ss_pred EccCCCCccCHHH---cCCCCEEEEeecc
Confidence 9999999999774 7999999999964
No 210
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.09 E-value=8.9e-06 Score=95.99 Aligned_cols=92 Identities=12% Similarity=0.119 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc
Q psy15208 52 KVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE 131 (1027)
Q Consensus 52 ~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~ 131 (1027)
..|..+++.|.+.||.+ ..|++|+|.+.+..........++...++.+....+..+++|+||||||.+++.++..+|+.
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~ 186 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDV 186 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHh
Confidence 46888999999999865 88999999987653333456788888888888877788999999999999999999888762
Q ss_pred --CCccEEEEEccCC
Q psy15208 132 --ISIKILILISVAV 144 (1027)
Q Consensus 132 --~~V~gLVli~p~~ 144 (1027)
..|+.+|+++++.
T Consensus 187 ~~k~I~~~I~la~P~ 201 (440)
T PLN02733 187 FEKYVNSWIAIAAPF 201 (440)
T ss_pred HHhHhccEEEECCCC
Confidence 2478999998764
No 211
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.08 E-value=1.7e-05 Score=87.78 Aligned_cols=91 Identities=31% Similarity=0.385 Sum_probs=76.6
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+ +..++.+.||+|+|+|.+. +|+-+|..|...||.|++++..- -++.+..++|||||
T Consensus 141 Tp~av~~lL-~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T-------------~~l~~~~~~ADIvI 206 (278)
T PRK14172 141 TPNSVITLI-KSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKT-------------KNLKEVCKKADILV 206 (278)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEE
Confidence 445555444 4457789999999999999 99999999999999999996432 35677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 207 sAvGkp~~i~~~~---ik~gavVIDvGin 232 (278)
T PRK14172 207 VAIGRPKFIDEEY---VKEGAIVIDVGTS 232 (278)
T ss_pred EcCCCcCccCHHH---cCCCcEEEEeecc
Confidence 9999999999774 7999999999975
No 212
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=98.08 E-value=5.9e-06 Score=95.54 Aligned_cols=92 Identities=22% Similarity=0.240 Sum_probs=74.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHh-----ccCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAK-----KYGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l-----~~aDvvi~a 872 (1027)
...|++|+|.|.|.||..+++.|+.+|+ +|++++.++.+...+...|++ +.+. .+.+ ...|+++++
T Consensus 183 ~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~ 262 (368)
T TIGR02818 183 VEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFEC 262 (368)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEEC
Confidence 3579999999999999999999999999 799999999998888888875 3321 1212 147999999
Q ss_pred CCCcccCcHHHHhcCCCC-eEEEEecCC
Q psy15208 873 TGNYHVITHDHMRDMKDQ-AIVCNIGHF 899 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~g-ailvNvG~~ 899 (1027)
+|....+. +.++.++++ +.++.+|..
T Consensus 263 ~G~~~~~~-~~~~~~~~~~G~~v~~g~~ 289 (368)
T TIGR02818 263 IGNVNVMR-AALECCHKGWGESIIIGVA 289 (368)
T ss_pred CCCHHHHH-HHHHHhhcCCCeEEEEecc
Confidence 99766444 458889886 999999976
No 213
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.08 E-value=1.7e-05 Score=88.35 Aligned_cols=91 Identities=22% Similarity=0.234 Sum_probs=76.6
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+ +..++.+.||+|+|+|-+. +|+-+|..|...||.|++++..- -++.+..++|||||
T Consensus 143 Tp~avi~lL-~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T-------------~~l~~~~~~ADIvV 208 (294)
T PRK14187 143 TPKGCLYLI-KTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSAT-------------RDLADYCSKADILV 208 (294)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCC-------------CCHHHHHhhCCEEE
Confidence 445555444 4457789999999999999 99999999999999999996532 35677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 209 sAvGkp~~i~~~~---ik~gaiVIDVGin 234 (294)
T PRK14187 209 AAVGIPNFVKYSW---IKKGAIVIDVGIN 234 (294)
T ss_pred EccCCcCccCHHH---cCCCCEEEEeccc
Confidence 9999999999775 6899999999974
No 214
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.07 E-value=1.7e-05 Score=87.87 Aligned_cols=91 Identities=26% Similarity=0.316 Sum_probs=75.3
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..- ++..++.+.||+|+|+|.+. +|+-+|..|...||.|++++..- -++.+..++||+||
T Consensus 140 Tp~avi~l-L~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T-------------~~l~~~~~~ADIvV 205 (281)
T PRK14183 140 TPLGVMEL-LEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFT-------------KDLKAHTKKADIVI 205 (281)
T ss_pred cHHHHHHH-HHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------cCHHHHHhhCCEEE
Confidence 44555544 44457889999999999996 99999999999999999995422 24677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|..
T Consensus 206 ~AvGkp~~i~~~~---vk~gavvIDvGin 231 (281)
T PRK14183 206 VGVGKPNLITEDM---VKEGAIVIDIGIN 231 (281)
T ss_pred EecCcccccCHHH---cCCCcEEEEeecc
Confidence 9999999999774 7999999999975
No 215
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.07 E-value=1.8e-05 Score=88.39 Aligned_cols=92 Identities=26% Similarity=0.345 Sum_probs=76.8
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|++++..- -++.+..++||||
T Consensus 140 cTp~aii~lL~-~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIv 205 (297)
T PRK14186 140 CTPAGVMRLLR-SQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRT-------------QDLASITREADIL 205 (297)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEE
Confidence 34555554443 457789999999999999 99999999999999999995432 2567788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.+++++.++ +|+|++++++|..
T Consensus 206 IsAvGkp~~i~~~~---ik~gavVIDvGin 232 (297)
T PRK14186 206 VAAAGRPNLIGAEM---VKPGAVVVDVGIH 232 (297)
T ss_pred EEccCCcCccCHHH---cCCCCEEEEeccc
Confidence 99999999999774 7999999999986
No 216
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=98.07 E-value=1.6e-05 Score=88.75 Aligned_cols=92 Identities=22% Similarity=0.293 Sum_probs=77.3
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|++++.. +-++++.+++||||
T Consensus 149 cTp~avi~lL~-~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~-------------T~nl~~~~~~ADIv 214 (299)
T PLN02516 149 CTPKGCLELLS-RSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSR-------------TPDPESIVREADIV 214 (299)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC-------------CCCHHHHHhhCCEE
Confidence 34555554444 447889999999999999 9999999999999999999653 23577888999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.++++..+. +|+|++++++|..
T Consensus 215 v~AvGk~~~i~~~~---vk~gavVIDvGin 241 (299)
T PLN02516 215 IAAAGQAMMIKGDW---IKPGAAVIDVGTN 241 (299)
T ss_pred EEcCCCcCccCHHH---cCCCCEEEEeecc
Confidence 99999999999774 7999999999975
No 217
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.07 E-value=1.3e-05 Score=79.92 Aligned_cols=93 Identities=24% Similarity=0.320 Sum_probs=71.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHH-Hhhc---CcEEcC---HHHHhccCCEEEecCCCc-c
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQ-AAME---GFLVVT---MEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~-A~~~---G~~v~~---~~e~l~~aDvvi~atG~~-~ 877 (1027)
.+.|++|+|+|+|..|+.++..+...|++ |+++.+++.|+.+ +... .+...+ +.+.+.++|+||+||+.. .
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSGMP 88 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTTST
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCCCc
Confidence 58999999999999999999999999995 9999999887664 3333 334444 444567899999999765 4
Q ss_pred cCcHHHHhcCCCC-eEEEEecCC
Q psy15208 878 VITHDHMRDMKDQ-AIVCNIGHF 899 (1027)
Q Consensus 878 vi~~~~~~~mk~g-ailvNvG~~ 899 (1027)
.++++.+...++. .+++..+..
T Consensus 89 ~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 89 IITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp SSTHHHHTTTCHHCSEEEES-SS
T ss_pred ccCHHHHHHHHhhhhceeccccC
Confidence 7888887766654 489999864
No 218
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.07 E-value=1.6e-05 Score=88.41 Aligned_cols=91 Identities=23% Similarity=0.349 Sum_probs=76.5
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|+++...- -++.+..++|||||
T Consensus 138 Tp~avi~lL~-~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T-------------~~l~~~~~~ADIvI 203 (287)
T PRK14173 138 TPAGVVRLLK-HYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKT-------------QDLPAVTRRADVLV 203 (287)
T ss_pred CHHHHHHHHH-HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEE
Confidence 4555554444 457789999999999999 99999999999999999995432 35678889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 204 sAvGkp~~i~~~~---vk~GavVIDVGin 229 (287)
T PRK14173 204 VAVGRPHLITPEM---VRPGAVVVDVGIN 229 (287)
T ss_pred EecCCcCccCHHH---cCCCCEEEEccCc
Confidence 9999999998775 6999999999985
No 219
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=98.06 E-value=1.5e-05 Score=90.14 Aligned_cols=92 Identities=23% Similarity=0.287 Sum_probs=77.0
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.++..-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|+++...- -++.+..++||||
T Consensus 196 CTp~avi~LL~-~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T-------------~nl~~~~~~ADIv 261 (345)
T PLN02897 196 CTPKGCVELLI-RSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFT-------------KDPEQITRKADIV 261 (345)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCC-------------CCHHHHHhhCCEE
Confidence 34555555444 447789999999999999 99999999999999999996432 2467788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.+++++.++ +|+|+++|++|.-
T Consensus 262 IsAvGkp~~v~~d~---vk~GavVIDVGin 288 (345)
T PLN02897 262 IAAAGIPNLVRGSW---LKPGAVVIDVGTT 288 (345)
T ss_pred EEccCCcCccCHHH---cCCCCEEEEcccc
Confidence 99999999999774 7999999999985
No 220
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=98.06 E-value=1.5e-05 Score=90.43 Aligned_cols=92 Identities=25% Similarity=0.329 Sum_probs=77.2
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.++..-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|+++... .-++.+..++||||
T Consensus 213 CTp~avielL~-~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~-------------T~nl~~~~r~ADIV 278 (364)
T PLN02616 213 CTPKGCIELLH-RYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITREADII 278 (364)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCC-------------CCCHHHHHhhCCEE
Confidence 34555554444 457789999999999999 9999999999999999999543 23577888999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.+++++.++ +|+|+++|++|.-
T Consensus 279 IsAvGkp~~i~~d~---vK~GAvVIDVGIn 305 (364)
T PLN02616 279 ISAVGQPNMVRGSW---IKPGAVVIDVGIN 305 (364)
T ss_pred EEcCCCcCcCCHHH---cCCCCEEEecccc
Confidence 99999999999774 7999999999974
No 221
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=98.06 E-value=6e-06 Score=95.32 Aligned_cols=147 Identities=12% Similarity=0.034 Sum_probs=94.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHH-HHhhcCcE-EcC------HHHHhccCCEEEecCCCcccC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL-QAAMEGFL-VVT------MEYAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~-~A~~~G~~-v~~------~~e~l~~aDvvi~atG~~~vi 879 (1027)
..|++|+|.|.|.||..+++.++.+|++|++++.++.+.. .+...|++ +.+ +.+.....|++++++|+...+
T Consensus 182 ~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~D~vid~~g~~~~~ 261 (360)
T PLN02586 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTMDYIIDTVSAVHAL 261 (360)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCCCEEEECCCCHHHH
Confidence 4799999999999999999999999999988877665543 44567875 322 112223479999999976545
Q ss_pred cHHHHhcCCCCeEEEEecCCC--cccchhhhhccceecccccee-eeecCCCcEEEEecCCccccccCCCCCCcceEehh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFD--NEIEVEKLKKYKWENIKPQVD-HIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSS 956 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d--~eid~~~l~~~~~~~~~~~v~-~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~s 956 (1027)
. +.++.+++++.++.+|... .+++...+............. ...+ .+.+.++++|++ .| .+ + .
T Consensus 262 ~-~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~--~~~~~li~~g~i--------~~-~~-~-~ 327 (360)
T PLN02586 262 G-PLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKET--QEMLDFCAKHNI--------TA-DI-E-L 327 (360)
T ss_pred H-HHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHH--HHHHHHHHhCCC--------CC-cE-E-E
Confidence 4 4589999999999999753 344443332212111111110 1112 356677888877 23 22 2 4
Q ss_pred hHhHHHHHHHHh
Q psy15208 957 FANQTLAQIELF 968 (1027)
Q Consensus 957 f~~q~la~~~l~ 968 (1027)
|.+..+...+-.
T Consensus 328 ~~l~~~~~A~~~ 339 (360)
T PLN02586 328 IRMDEINTAMER 339 (360)
T ss_pred EeHHHHHHHHHH
Confidence 666666666544
No 222
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=98.05 E-value=9.2e-06 Score=89.30 Aligned_cols=89 Identities=24% Similarity=0.327 Sum_probs=73.2
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcCcEEc-------CHHHHhccCCEEEecC---C--Cc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEGFLVV-------TMEYAKKYGDIFVTCT---G--NY 876 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G~~v~-------~~~e~l~~aDvvi~at---G--~~ 876 (1027)
.-+|+|+|+|-+|...|+.+.++||+|++.|+|+.|+.+ -...+.++. .+++++.++|+||.+. | .+
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaP 247 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAP 247 (371)
T ss_pred CccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCc
Confidence 368999999999999999999999999999999877665 223444422 3778889999998753 4 45
Q ss_pred ccCcHHHHhcCCCCeEEEEecC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~ 898 (1027)
.+++++++++||+|++++++..
T Consensus 248 kLvt~e~vk~MkpGsVivDVAi 269 (371)
T COG0686 248 KLVTREMVKQMKPGSVIVDVAI 269 (371)
T ss_pred eehhHHHHHhcCCCcEEEEEEE
Confidence 7899999999999999998865
No 223
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=98.05 E-value=1.7e-05 Score=81.46 Aligned_cols=91 Identities=16% Similarity=0.241 Sum_probs=70.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCcH---H--HH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITH---D--HM 884 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~---~--~~ 884 (1027)
++|++||.|..|+.+|++|...|.+|.++|+++.+.......|... .++.+++..+|+|+++..+...+.. . .+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~ 81 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL 81 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence 5899999999999999999999999999999998888888888874 5789999999999999876432221 1 45
Q ss_pred hcCCCCeEEEEecCCCc
Q psy15208 885 RDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d~ 901 (1027)
+.+++|.+++|.+..+-
T Consensus 82 ~~l~~g~iiid~sT~~p 98 (163)
T PF03446_consen 82 AGLRPGKIIIDMSTISP 98 (163)
T ss_dssp GGS-TTEEEEE-SS--H
T ss_pred hccccceEEEecCCcch
Confidence 67899999999988643
No 224
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.05 E-value=2.1e-05 Score=87.21 Aligned_cols=91 Identities=22% Similarity=0.324 Sum_probs=76.1
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+.+ .++.+.||+|+|+|-+. +|+-+|..|...||.|++++..- -++.+..++|||||
T Consensus 141 Tp~aii~lL~~-y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T-------------~dl~~~~k~ADIvI 206 (282)
T PRK14180 141 TPKGIMTMLRE-YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------TDLKSHTTKADILI 206 (282)
T ss_pred CHHHHHHHHHH-hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCC-------------CCHHHHhhhcCEEE
Confidence 45555554443 47789999999999999 99999999999999999996432 25667789999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 207 sAvGkp~~i~~~~---vk~gavVIDvGin 232 (282)
T PRK14180 207 VAVGKPNFITADM---VKEGAVVIDVGIN 232 (282)
T ss_pred EccCCcCcCCHHH---cCCCcEEEEeccc
Confidence 9999999999764 7999999999974
No 225
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=98.04 E-value=7.8e-06 Score=93.40 Aligned_cols=93 Identities=22% Similarity=0.225 Sum_probs=73.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCH-----HHH---hc--cCC-EEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTM-----EYA---KK--YGD-IFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~-----~e~---l~--~aD-vvi~atG 874 (1027)
..|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|++ +.+. ++. .. ..| ++++|+|
T Consensus 159 ~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G 238 (347)
T PRK10309 159 CEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAG 238 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCCCeEEEECCC
Confidence 4799999999999999999999999996 78888888888878778874 3221 111 11 356 9999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
....+. +.++.|+++|.++.+|....
T Consensus 239 ~~~~~~-~~~~~l~~~G~iv~~G~~~~ 264 (347)
T PRK10309 239 VPQTVE-LAIEIAGPRAQLALVGTLHH 264 (347)
T ss_pred CHHHHH-HHHHHhhcCCEEEEEccCCC
Confidence 876555 45899999999999997643
No 226
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.04 E-value=1.7e-05 Score=87.76 Aligned_cols=91 Identities=27% Similarity=0.360 Sum_probs=76.7
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCC-hhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYG-DVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G-~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+. ..+..+.|++|+|+|.+ .+|+.+|..+...|+.|+++..+. .++.+.+++||+||
T Consensus 135 Tp~av~~ll~-~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t-------------~~L~~~~~~ADIvI 200 (279)
T PRK14178 135 TPNGIMTLLH-EYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKT-------------ENLKAELRQADILV 200 (279)
T ss_pred CHHHHHHHHH-HcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecCh-------------hHHHHHHhhCCEEE
Confidence 4555554444 45778999999999999 599999999999999999997543 25678889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 201 ~Avgk~~lv~~~~---vk~GavVIDVgi~ 226 (279)
T PRK14178 201 SAAGKAGFITPDM---VKPGATVIDVGIN 226 (279)
T ss_pred ECCCcccccCHHH---cCCCcEEEEeecc
Confidence 9999889999886 5999999999974
No 227
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=98.04 E-value=9.3e-06 Score=92.32 Aligned_cols=92 Identities=21% Similarity=0.237 Sum_probs=74.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCHH--------HHhc--cCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTME--------YAKK--YGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~~--------e~l~--~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|++ +.+.. +... ..|++++++|.
T Consensus 162 ~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~ 241 (339)
T cd08239 162 SGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGN 241 (339)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCC
Confidence 5699999999999999999999999998 99999999888888888874 33211 1122 47999999998
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...+. ..++.+++++.++.+|..+
T Consensus 242 ~~~~~-~~~~~l~~~G~~v~~g~~~ 265 (339)
T cd08239 242 TAARR-LALEAVRPWGRLVLVGEGG 265 (339)
T ss_pred HHHHH-HHHHHhhcCCEEEEEcCCC
Confidence 76433 4588999999999999753
No 228
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=98.04 E-value=3.3e-05 Score=70.77 Aligned_cols=68 Identities=28% Similarity=0.450 Sum_probs=60.0
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhC-CCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHH
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRAL-SAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHD 882 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~-Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~ 882 (1027)
.+..+.+++++|+|+|.+|+.++..+... +.+|.++|+ |++|++++..+.+.++
T Consensus 17 ~~~~~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r-------------------------di~i~~~~~~~~~~~~ 71 (86)
T cd05191 17 TNKSLKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR-------------------------DILVTATPAGVPVLEE 71 (86)
T ss_pred hCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC-------------------------CEEEEcCCCCCCchHH
Confidence 34568999999999999999999999998 568989866 9999999999888887
Q ss_pred HHhcCCCCeEEEEe
Q psy15208 883 HMRDMKDQAIVCNI 896 (1027)
Q Consensus 883 ~~~~mk~gailvNv 896 (1027)
+++.++++.+++++
T Consensus 72 ~~~~~~~~~~v~~~ 85 (86)
T cd05191 72 ATAKINEGAVVIDL 85 (86)
T ss_pred HHHhcCCCCEEEec
Confidence 79999999998865
No 229
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.04 E-value=2.3e-05 Score=86.88 Aligned_cols=91 Identities=22% Similarity=0.284 Sum_probs=76.2
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+ +..++.+.||+|+|+|-+. +|+-+|..|...||.|++++.. .-++.+..++|||||
T Consensus 140 Tp~avi~ll-~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~-------------T~nl~~~~~~ADIvI 205 (282)
T PRK14182 140 TPAGVMRML-DEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSR-------------TADLAGEVGRADILV 205 (282)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC-------------CCCHHHHHhhCCEEE
Confidence 445555444 4447789999999999999 9999999999999999999543 235677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 206 ~AvGk~~~i~~~~---ik~gaiVIDvGin 231 (282)
T PRK14182 206 AAIGKAELVKGAW---VKEGAVVIDVGMN 231 (282)
T ss_pred EecCCcCccCHHH---cCCCCEEEEeece
Confidence 9999999999774 7999999999975
No 230
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=98.04 E-value=3.7e-06 Score=96.19 Aligned_cols=91 Identities=11% Similarity=0.127 Sum_probs=70.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHh-CC-CEEEEEcCCchhHHHHhhcCcEEcCHHHHhc--cCCEEEecCCC---cccCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRA-LS-AQVWIIEIDPICALQAAMEGFLVVTMEYAKK--YGDIFVTCTGN---YHVIT 880 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~-~G-a~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~--~aDvvi~atG~---~~vi~ 880 (1027)
..|++|+|+|+|.||..+++.++. +| ++|++++.++.|+..+...+.... .++... ..|++++++|. ...+.
T Consensus 162 ~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~-~~~~~~~~g~d~viD~~G~~~~~~~~~ 240 (341)
T cd08237 162 KDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYL-IDDIPEDLAVDHAFECVGGRGSQSAIN 240 (341)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceee-hhhhhhccCCcEEEECCCCCccHHHHH
Confidence 469999999999999999998886 55 589999999988877776665432 222222 47999999994 33344
Q ss_pred HHHHhcCCCCeEEEEecCCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d 900 (1027)
+.++.|+++|+++.+|...
T Consensus 241 -~~~~~l~~~G~iv~~G~~~ 259 (341)
T cd08237 241 -QIIDYIRPQGTIGLMGVSE 259 (341)
T ss_pred -HHHHhCcCCcEEEEEeecC
Confidence 4589999999999999764
No 231
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.04 E-value=2.3e-05 Score=87.04 Aligned_cols=91 Identities=20% Similarity=0.335 Sum_probs=76.2
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhC----CCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccC
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRAL----SAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYG 866 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~----Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~a 866 (1027)
|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|... +|.|++++..- -++.+.+++|
T Consensus 136 Tp~avi~lL~-~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T-------------~~l~~~~~~A 201 (287)
T PRK14181 136 TPAGIIELLK-YYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQS-------------ENLTEILKTA 201 (287)
T ss_pred CHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCC-------------CCHHHHHhhC
Confidence 4555555444 457889999999999999 999999999988 89999996422 2577888999
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
||||.|+|.+++++.++ +|+|++++++|..
T Consensus 202 DIvV~AvG~p~~i~~~~---ik~GavVIDvGin 231 (287)
T PRK14181 202 DIIIAAIGVPLFIKEEM---IAEKAVIVDVGTS 231 (287)
T ss_pred CEEEEccCCcCccCHHH---cCCCCEEEEeccc
Confidence 99999999999999774 7999999999975
No 232
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=98.03 E-value=8.1e-06 Score=93.03 Aligned_cols=91 Identities=13% Similarity=0.064 Sum_probs=75.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHH-hccCCEEEecCCCcccCcHHHHh
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYA-KKYGDIFVTCTGNYHVITHDHMR 885 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~-l~~aDvvi~atG~~~vi~~~~~~ 885 (1027)
..|++|+|.|.|.+|..+++.++.+|++|++++.++.+...+...|++ +.+..+. ....|++++++|....+. ..++
T Consensus 164 ~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~~~~~d~~i~~~~~~~~~~-~~~~ 242 (329)
T TIGR02822 164 PPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTPPEPLDAAILFAPAGGLVP-PALE 242 (329)
T ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccCcccceEEEECCCcHHHHH-HHHH
Confidence 579999999999999999999999999999999999999999999986 3332221 234788888887766444 5689
Q ss_pred cCCCCeEEEEecCC
Q psy15208 886 DMKDQAIVCNIGHF 899 (1027)
Q Consensus 886 ~mk~gailvNvG~~ 899 (1027)
.++++|+++.+|..
T Consensus 243 ~l~~~G~~v~~G~~ 256 (329)
T TIGR02822 243 ALDRGGVLAVAGIH 256 (329)
T ss_pred hhCCCcEEEEEecc
Confidence 99999999999974
No 233
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.02 E-value=2.5e-05 Score=86.71 Aligned_cols=92 Identities=25% Similarity=0.341 Sum_probs=77.2
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHh--CCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCC
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRA--LSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGD 867 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~--~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aD 867 (1027)
.|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|.. .+|.|++++.. .-++.+.+++||
T Consensus 140 cTp~av~~ll~-~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~-------------T~~l~~~~k~AD 205 (284)
T PRK14193 140 CTPRGIVHLLR-RYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTG-------------TRDLAAHTRRAD 205 (284)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCC-------------CCCHHHHHHhCC
Confidence 34555555444 457789999999999999 99999999988 79999999653 235788889999
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|||.|+|.+++++.++ +|+|++++++|..
T Consensus 206 IvV~AvGkp~~i~~~~---ik~GavVIDvGin 234 (284)
T PRK14193 206 IIVAAAGVAHLVTADM---VKPGAAVLDVGVS 234 (284)
T ss_pred EEEEecCCcCccCHHH---cCCCCEEEEcccc
Confidence 9999999999999775 7999999999986
No 234
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=98.02 E-value=1e-05 Score=94.64 Aligned_cols=92 Identities=24% Similarity=0.248 Sum_probs=73.8
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcEEcC------HHHHh------ccCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFLVVT------MEYAK------KYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~v~~------~~e~l------~~aDvvi~at 873 (1027)
...|++|+|.|.|.||+.+++.++.+|++ |+++|.++.|...|...|++.+. ..+.+ ...|++++++
T Consensus 183 ~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~ 262 (393)
T TIGR02819 183 VGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCV 262 (393)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECC
Confidence 35799999999999999999999999997 55568888888889999986432 22222 1379999999
Q ss_pred CCcc--------------cCcHHHHhcCCCCeEEEEecCC
Q psy15208 874 GNYH--------------VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 874 G~~~--------------vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.+. .+. +.++.++++|.++.+|.+
T Consensus 263 G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~i~~~G~~ 301 (393)
T TIGR02819 263 GFEARGHGHDGKKEAPATVLN-SLMEVTRVGGAIGIPGLY 301 (393)
T ss_pred CCccccccccccccchHHHHH-HHHHHhhCCCEEEEeeec
Confidence 9862 444 458999999999999987
No 235
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.02 E-value=2.1e-05 Score=88.10 Aligned_cols=91 Identities=25% Similarity=0.244 Sum_probs=75.5
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEc-CCchhHHHHhhcCcEEcCHHHHhccCCE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIE-IDPICALQAAMEGFLVVTMEYAKKYGDI 868 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d-~dp~r~~~A~~~G~~v~~~~e~l~~aDv 868 (1027)
.|-.+++.-+. ..+..+.||+|+|+| -|-+|+.+|..|...|+.|++++ +.+ ++++++++||+
T Consensus 140 cTp~ai~~ll~-~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~--------------~l~e~~~~ADI 204 (296)
T PRK14188 140 CTPLGCMMLLR-RVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR--------------DLPAVCRRADI 204 (296)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC--------------CHHHHHhcCCE
Confidence 34556665444 447789999999999 77899999999999999999995 433 36778899999
Q ss_pred EEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 869 FVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 869 vi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
||+++|.++.+.... +|+|++++++|..
T Consensus 205 VIsavg~~~~v~~~~---lk~GavVIDvGin 232 (296)
T PRK14188 205 LVAAVGRPEMVKGDW---IKPGATVIDVGIN 232 (296)
T ss_pred EEEecCChhhcchhe---ecCCCEEEEcCCc
Confidence 999999999888653 8999999999985
No 236
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.00 E-value=2.3e-05 Score=87.00 Aligned_cols=92 Identities=24% Similarity=0.300 Sum_probs=77.2
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHh----CCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhcc
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRA----LSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKY 865 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~----~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~ 865 (1027)
.|-.+++.-+.+ .++.+.||+|+|+|-+. +|+-+|..|.. .+|+|+++..+. .++.+.+++
T Consensus 139 cTp~av~~lL~~-~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t-------------~~l~~~~~~ 204 (286)
T PRK14184 139 CTPAGVMTLLER-YGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRT-------------PDLAEECRE 204 (286)
T ss_pred CCHHHHHHHHHH-hCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCc-------------hhHHHHHHh
Confidence 345555554444 47889999999999999 99999999998 899999997543 357788899
Q ss_pred CCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 866 GDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
||+||.|+|.+++++.+++ |+|++++++|.-
T Consensus 205 ADIVI~AvG~p~li~~~~v---k~GavVIDVGi~ 235 (286)
T PRK14184 205 ADFLFVAIGRPRFVTADMV---KPGAVVVDVGIN 235 (286)
T ss_pred CCEEEEecCCCCcCCHHHc---CCCCEEEEeeee
Confidence 9999999999999998764 999999999975
No 237
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.98 E-value=3.3e-05 Score=85.98 Aligned_cols=92 Identities=22% Similarity=0.325 Sum_probs=76.0
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhC----CCEEEEEcCCchhHHHHhhcCcEEcCHHHHhcc
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRAL----SAQVWIIEIDPICALQAAMEGFLVVTMEYAKKY 865 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~----Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~ 865 (1027)
.|-.++..-+. ..++.+.||+|+|+|.+. +|+-+|..|... +|.|+++...- -++.+..++
T Consensus 139 cTp~av~~lL~-~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T-------------~nl~~~~~~ 204 (293)
T PRK14185 139 ATPNGILELLK-RYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRS-------------KNLKKECLE 204 (293)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCC-------------CCHHHHHhh
Confidence 34555554444 447789999999999999 999999999887 79999995432 356778899
Q ss_pred CCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 866 GDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|||||.|+|.+++++.+ ++|+|++++++|..
T Consensus 205 ADIvIsAvGkp~~i~~~---~vk~gavVIDvGin 235 (293)
T PRK14185 205 ADIIIAALGQPEFVKAD---MVKEGAVVIDVGTT 235 (293)
T ss_pred CCEEEEccCCcCccCHH---HcCCCCEEEEecCc
Confidence 99999999999999976 47999999999984
No 238
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.98 E-value=3e-05 Score=86.15 Aligned_cols=92 Identities=27% Similarity=0.373 Sum_probs=76.0
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.++..-+ +..++.+.||+|+|+|. |-+|+.+|..|...|+.|+++...- -++.+.+++||+|
T Consensus 140 cTp~avi~lL-~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t-------------~~l~~~~~~ADIV 205 (284)
T PRK14179 140 CTPAGIMEMF-REYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRT-------------RNLAEVARKADIL 205 (284)
T ss_pred CCHHHHHHHH-HHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCC-------------CCHHHHHhhCCEE
Confidence 3455555444 44577899999999999 8899999999999999999993211 2577888999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.++|.++.+..+. +|+|++++++|..
T Consensus 206 I~avg~~~~v~~~~---ik~GavVIDvgin 232 (284)
T PRK14179 206 VVAIGRGHFVTKEF---VKEGAVVIDVGMN 232 (284)
T ss_pred EEecCccccCCHHH---ccCCcEEEEecce
Confidence 99999999998764 8999999999975
No 239
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.98 E-value=2.9e-05 Score=84.34 Aligned_cols=124 Identities=19% Similarity=0.153 Sum_probs=79.4
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC----cEEEEEcCCCCCCCC--CC------
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG----YISIRMNFRGVGASS--GT------ 82 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G----y~Vla~DlrGhG~S~--g~------ 82 (1027)
......+|.|++....++.|+|+++||. .+.............+.+.| ..+++++..+.+... ..
T Consensus 6 ~~~~~~VylP~~y~~~~~~PvlylldG~---~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~ 82 (251)
T PF00756_consen 6 RDRRVWVYLPPGYDPSKPYPVLYLLDGQ---SGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSS 82 (251)
T ss_dssp EEEEEEEEECTTGGTTTTEEEEEEESHT---THHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTT
T ss_pred CeEEEEEEECCCCCCCCCCEEEEEccCC---ccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccc
Confidence 3567788889875445678999999995 11211222333444444543 456666765555111 00
Q ss_pred -CCCc----cchHHHH-HHHHHHHHHhCCCCc--EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 83 -YDSG----NGETDDM-EILLRYIQKKYPYLP--IILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 83 -~~~~----~~~~~Dv-~avl~~L~~~~~~~p--viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.... ......+ .+++.++...++..+ ..+.|+||||..|+.++.++|+ .+.++++++|.
T Consensus 83 ~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--~F~~~~~~S~~ 149 (251)
T PF00756_consen 83 RRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--LFGAVIAFSGA 149 (251)
T ss_dssp CBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--TESEEEEESEE
T ss_pred cccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--ccccccccCcc
Confidence 0011 1122222 467778888776433 6999999999999999999999 79999999976
No 240
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.95 E-value=0.00026 Score=80.26 Aligned_cols=119 Identities=16% Similarity=0.208 Sum_probs=84.4
Q ss_pred EEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC------CC-----
Q psy15208 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY------DS----- 85 (1027)
Q Consensus 17 I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~------~~----- 85 (1027)
-+..+..|+.. ..+.+|++|.++|-+.++ .+ .+..-++..|.++|+..+.+..|-||...... ..
T Consensus 77 a~~~~~~P~~~-~~~~rp~~IhLagTGDh~-f~--rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~ 152 (348)
T PF09752_consen 77 ARFQLLLPKRW-DSPYRPVCIHLAGTGDHG-FW--RRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLF 152 (348)
T ss_pred eEEEEEECCcc-ccCCCceEEEecCCCccc-hh--hhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHH
Confidence 34445557642 124589999999965432 11 11223488899999999999999999865311 11
Q ss_pred --ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 86 --GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 86 --~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
....+.+...++.|+..+ +..++.+.|.||||.+|.+++...|. .+..+-.+++
T Consensus 153 ~~g~~~i~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~--pv~~vp~ls~ 208 (348)
T PF09752_consen 153 VMGRATILESRALLHWLERE-GYGPLGLTGISMGGHMAALAASNWPR--PVALVPCLSW 208 (348)
T ss_pred HHHhHHHHHHHHHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCCC--ceeEEEeecc
Confidence 123577888999999988 66699999999999999999999987 5555555554
No 241
>KOG1515|consensus
Probab=97.94 E-value=0.00012 Score=83.50 Aligned_cols=128 Identities=18% Similarity=0.155 Sum_probs=92.0
Q ss_pred CCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHH-HhCCcEEEEEcCCCCCCCCCCCCCccchHH
Q psy15208 13 SVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVM-LSLGYISIRMNFRGVGASSGTYDSGNGETD 91 (1027)
Q Consensus 13 ~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~L-a~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~ 91 (1027)
+.+.+.+++|.|.........|++||+||+|+--|+.....+..+...+ .+.+..|+.+|||- ++.+ .+....+
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL---APEh--~~Pa~y~ 144 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL---APEH--PFPAAYD 144 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc---CCCC--CCCccch
Confidence 3447899999998643335789999999988877765555677777776 44589999999994 3322 1223456
Q ss_pred HHHHHHHHHHHh------CCCCcEEEEEechhHHHHHHHHHhcC----CcCCccEEEEEccCCC
Q psy15208 92 DMEILLRYIQKK------YPYLPIILAGFSFGTFVQAKLQKRLD----KEISIKILILISVAVK 145 (1027)
Q Consensus 92 Dv~avl~~L~~~------~~~~pviLVGhSmGG~vAl~~A~~~p----~~~~V~gLVli~p~~~ 145 (1027)
|...++.|+..+ .+-.+++|+|-|.||.+|..++.+.- ...++++.|++.|...
T Consensus 145 D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 145 DGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred HHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 666666666552 23456999999999999988887643 2357899999999764
No 242
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.94 E-value=4.3e-05 Score=85.40 Aligned_cols=91 Identities=22% Similarity=0.260 Sum_probs=75.2
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhC----CCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccC
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRAL----SAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYG 866 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~----Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~a 866 (1027)
|-.+++.-+ +..++.+.||+|+|+|-+. +|+-+|..|... +|.|+++...- -++.+..++|
T Consensus 140 Tp~avi~lL-~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T-------------~~l~~~~~~A 205 (297)
T PRK14167 140 TPHGIQKLL-AAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRT-------------DDLAAKTRRA 205 (297)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCC-------------CCHHHHHhhC
Confidence 455555444 3447789999999999999 999999999877 89999995432 2567788999
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
||||.|+|.+++++.++ +|+|++++++|.-
T Consensus 206 DIvIsAvGkp~~i~~~~---ik~gaiVIDvGin 235 (297)
T PRK14167 206 DIVVAAAGVPELIDGSM---LSEGATVIDVGIN 235 (297)
T ss_pred CEEEEccCCcCccCHHH---cCCCCEEEEcccc
Confidence 99999999999999764 7999999999974
No 243
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=97.93 E-value=2.7e-05 Score=85.58 Aligned_cols=91 Identities=24% Similarity=0.298 Sum_probs=76.5
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+.+.- .+..+..+.||+|+|+|-+. +|+-+++.|...+|.|++++..- -++.+..++|||+|
T Consensus 139 Tp~gi~~l-l~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T-------------~~l~~~~k~ADIvv 204 (283)
T COG0190 139 TPAGIMTL-LEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRT-------------KDLASITKNADIVV 204 (283)
T ss_pred CHHHHHHH-HHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCC-------------CCHHHHhhhCCEEE
Confidence 44555544 44457789999999999999 89999999999999999996542 35677789999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|-++++..+ ++|+|++++.+|.-
T Consensus 205 ~AvG~p~~i~~d---~vk~gavVIDVGin 230 (283)
T COG0190 205 VAVGKPHFIKAD---MVKPGAVVIDVGIN 230 (283)
T ss_pred EecCCccccccc---cccCCCEEEecCCc
Confidence 999999999965 57999999999986
No 244
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.93 E-value=3.4e-05 Score=90.98 Aligned_cols=98 Identities=19% Similarity=0.235 Sum_probs=75.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHH-HHhhcCcEEc---CHHHHhccCCEEEecCCCc-ccCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICAL-QAAMEGFLVV---TMEYAKKYGDIFVTCTGNY-HVIT 880 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~-~A~~~G~~v~---~~~e~l~~aDvvi~atG~~-~vi~ 880 (1027)
.+.|++|+|+|+|.+|+.+++.++..| .+|+++++++.++. .+...|.... ++.+++..+|+||+|||.+ .+++
T Consensus 177 ~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aDvVi~aT~s~~~ii~ 256 (417)
T TIGR01035 177 SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEADIVISSTGAPHPIVS 256 (417)
T ss_pred CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCCEEEECCCCCCceEc
Confidence 378999999999999999999999999 58999999987755 4555565433 3556678999999999865 5788
Q ss_pred HHHHhcCC----CCeEEEEecCCCcccch
Q psy15208 881 HDHMRDMK----DQAIVCNIGHFDNEIEV 905 (1027)
Q Consensus 881 ~~~~~~mk----~gailvNvG~~d~eid~ 905 (1027)
.++++.+. ...++++++.. .++|.
T Consensus 257 ~e~l~~~~~~~~~~~~viDla~P-rdid~ 284 (417)
T TIGR01035 257 KEDVERALRERTRPLFIIDIAVP-RDVDP 284 (417)
T ss_pred HHHHHHHHhcCCCCeEEEEeCCC-CCCCh
Confidence 88887652 24588899854 44443
No 245
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.93 E-value=4.1e-05 Score=85.49 Aligned_cols=91 Identities=21% Similarity=0.302 Sum_probs=75.4
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhC----CCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccC
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRAL----SAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYG 866 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~----Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~a 866 (1027)
|-.++..-+ +..++.+.||+|+|+|-+. +|+-+|..|... +|.|+++...- -++.+..++|
T Consensus 144 Tp~avi~lL-~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T-------------~~l~~~~~~A 209 (297)
T PRK14168 144 TPAGIQEML-VRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRS-------------KNLARHCQRA 209 (297)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCC-------------cCHHHHHhhC
Confidence 445555444 3457889999999999999 999999999987 79999995432 3577788999
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
||||.|+|.+++++.++ +|+|++++++|.-
T Consensus 210 DIvVsAvGkp~~i~~~~---ik~gavVIDvGin 239 (297)
T PRK14168 210 DILIVAAGVPNLVKPEW---IKPGATVIDVGVN 239 (297)
T ss_pred CEEEEecCCcCccCHHH---cCCCCEEEecCCC
Confidence 99999999999999774 7999999999974
No 246
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=97.92 E-value=4e-05 Score=86.93 Aligned_cols=91 Identities=24% Similarity=0.262 Sum_probs=69.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEc-CCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCc---ccCcHHH
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIE-IDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY---HVITHDH 883 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d-~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~---~vi~~~~ 883 (1027)
|.||+|+|||+|.+|.++|+.++..|.+|++++ .++.+...+...|+.+.+..+++..+|+|+.++... ..+.++.
T Consensus 1 l~~kkIgiIG~G~mG~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp~~~~~~v~~ei 80 (314)
T TIGR00465 1 LKGKTVAIIGYGSQGHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPDEVQHEVYEAEI 80 (314)
T ss_pred CCcCEEEEEeEcHHHHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCcHhHHHHHHHHH
Confidence 579999999999999999999999999987754 434445556678998888888899999999988654 2233344
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
...|+++.+ +.+.|.
T Consensus 81 ~~~l~~g~i-Vs~aaG 95 (314)
T TIGR00465 81 QPLLKEGKT-LGFSHG 95 (314)
T ss_pred HhhCCCCcE-EEEeCC
Confidence 566888864 444443
No 247
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.91 E-value=4.5e-05 Score=85.27 Aligned_cols=91 Identities=23% Similarity=0.316 Sum_probs=75.7
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHh----CCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccC
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRA----LSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYG 866 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~----~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~a 866 (1027)
|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|.. .|+.|+++..+. .++.+.+++|
T Consensus 142 Tp~ail~ll~-~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t-------------~~l~~~~~~A 207 (295)
T PRK14174 142 TPYGILELLG-RYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSAT-------------KDIPSYTRQA 207 (295)
T ss_pred CHHHHHHHHH-HhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCc-------------hhHHHHHHhC
Confidence 4555554444 447789999999999999 99999999887 689999996543 2467888999
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|+||.|+|.+++++.+++ |+|++++++|.-
T Consensus 208 DIvI~Avg~~~li~~~~v---k~GavVIDVgi~ 237 (295)
T PRK14174 208 DILIAAIGKARFITADMV---KPGAVVIDVGIN 237 (295)
T ss_pred CEEEEecCccCccCHHHc---CCCCEEEEeecc
Confidence 999999999999998865 999999999974
No 248
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.91 E-value=4.5e-05 Score=90.12 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=74.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHH-HHhhcCcEEcC---HHHHhccCCEEEecCCCc-ccCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICAL-QAAMEGFLVVT---MEYAKKYGDIFVTCTGNY-HVIT 880 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~-~A~~~G~~v~~---~~e~l~~aDvvi~atG~~-~vi~ 880 (1027)
.+.|++|+|+|+|.+|+.+++.++..|+ +|+++++++.++. .+...|..+.+ +.+.+.++|+||+|||.+ .+++
T Consensus 179 ~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVI~aT~s~~~~i~ 258 (423)
T PRK00045 179 DLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADIVISSTGAPHPIIG 258 (423)
T ss_pred CccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCEEEECCCCCCcEEc
Confidence 3789999999999999999999999998 8999999987765 45555655443 445677899999999876 5778
Q ss_pred HHHHhcC-----CCCeEEEEecCC
Q psy15208 881 HDHMRDM-----KDQAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~m-----k~gailvNvG~~ 899 (1027)
.+.++.+ ..+.++++++..
T Consensus 259 ~~~l~~~~~~~~~~~~vviDla~P 282 (423)
T PRK00045 259 KGMVERALKARRHRPLLLVDLAVP 282 (423)
T ss_pred HHHHHHHHhhccCCCeEEEEeCCC
Confidence 8877664 246789999864
No 249
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=97.90 E-value=2e-05 Score=91.01 Aligned_cols=91 Identities=23% Similarity=0.237 Sum_probs=73.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHhc-----cCCEEEecC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAKK-----YGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l~-----~aDvvi~at 873 (1027)
..|++|+|.|.|.||..+++.|+.+|+ +|++++.++.+...+...|++ +.+. .+.+. .+|+|++++
T Consensus 185 ~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~ 264 (368)
T cd08300 185 EPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECI 264 (368)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECC
Confidence 579999999999999999999999999 799999999888888888875 3321 12121 379999999
Q ss_pred CCcccCcHHHHhcCCCC-eEEEEecCC
Q psy15208 874 GNYHVITHDHMRDMKDQ-AIVCNIGHF 899 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~g-ailvNvG~~ 899 (1027)
|....+. +.++.++++ +.++.+|..
T Consensus 265 g~~~~~~-~a~~~l~~~~G~~v~~g~~ 290 (368)
T cd08300 265 GNVKVMR-AALEACHKGWGTSVIIGVA 290 (368)
T ss_pred CChHHHH-HHHHhhccCCCeEEEEccC
Confidence 9765444 458889886 999999976
No 250
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=97.90 E-value=3.3e-05 Score=84.94 Aligned_cols=94 Identities=27% Similarity=0.324 Sum_probs=77.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEc-CCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCc---ccCcHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIE-IDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY---HVITHD 882 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d-~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~---~vi~~~ 882 (1027)
.|.||+|+|||||.-|++-|..||..|.+|++-= ........|..+||+|.+.+|+++.||+|...++.. .+..++
T Consensus 15 ~LkgK~iaIIGYGsQG~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~PDe~q~~vy~~~ 94 (338)
T COG0059 15 LLKGKKVAIIGYGSQGHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLPDEQQKEVYEKE 94 (338)
T ss_pred HhcCCeEEEEecChHHHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCchhhHHHHHHHH
Confidence 4899999999999999999999999999988753 333446779999999999999999999999877643 455555
Q ss_pred HHhcCCCCeEEEEecCCC
Q psy15208 883 HMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d 900 (1027)
--..||.|+.|...-.|+
T Consensus 95 I~p~Lk~G~aL~FaHGfN 112 (338)
T COG0059 95 IAPNLKEGAALGFAHGFN 112 (338)
T ss_pred hhhhhcCCceEEeccccc
Confidence 567899999887765554
No 251
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.90 E-value=7e-05 Score=75.50 Aligned_cols=106 Identities=18% Similarity=0.148 Sum_probs=76.1
Q ss_pred hHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHHH-HhhcCc-----EEcCHHHHhccCC
Q psy15208 795 SLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICALQ-AAMEGF-----LVVTMEYAKKYGD 867 (1027)
Q Consensus 795 s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~-A~~~G~-----~v~~~~e~l~~aD 867 (1027)
++..++.+. +..+.+++++|+|+|.+|+.+++.++..| .+|+++++++.+..+ +...+. ...+.++.+.++|
T Consensus 5 g~~~a~~~~-~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 83 (155)
T cd01065 5 GFVRALEEA-GIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLAEAD 83 (155)
T ss_pred HHHHHHHhh-CCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccccCC
Confidence 344444443 44578999999999999999999999996 689999999876554 333342 3556777788999
Q ss_pred EEEecCCCccc-CcHHH--HhcCCCCeEEEEecCCCc
Q psy15208 868 IFVTCTGNYHV-ITHDH--MRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 868 vvi~atG~~~v-i~~~~--~~~mk~gailvNvG~~d~ 901 (1027)
+||+|++.... +.... ...++++.++++++..+.
T Consensus 84 vvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~ 120 (155)
T cd01065 84 LIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPL 120 (155)
T ss_pred EEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCC
Confidence 99999876532 11111 123689999999987654
No 252
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.84 E-value=0.00026 Score=80.31 Aligned_cols=109 Identities=17% Similarity=0.120 Sum_probs=72.2
Q ss_pred CccEEEEECCCCCCCCCCCh------HHHHHHH---HHHHhCCcEEEEEcCCCCC-CCCCCC----C------Cc-cchH
Q psy15208 32 LKGVVLIAHPHPLFGGTMDN------KVVQTLV---RVMLSLGYISIRMNFRGVG-ASSGTY----D------SG-NGET 90 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~------~~~~~la---~~La~~Gy~Vla~DlrGhG-~S~g~~----~------~~-~~~~ 90 (1027)
...+||++|++..++-.... .+|..+. +.+.-..|-|++.|..|.+ .|.+.. . .+ .-.+
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti 129 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITI 129 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccH
Confidence 45789999998432111110 0232221 1122245899999999987 444321 1 11 1346
Q ss_pred HHHHHHHHHHHHhCCCCcEE-EEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 91 DDMEILLRYIQKKYPYLPII-LAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~~~pvi-LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.|...+.+.|.+.++..++. ++|-||||+.++.++..||+ +++.++.++.
T Consensus 130 ~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd--~V~~~i~ia~ 180 (368)
T COG2021 130 RDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD--RVRRAIPIAT 180 (368)
T ss_pred HHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH--HHhhhheecc
Confidence 77777777787887877754 99999999999999999999 6888777764
No 253
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.83 E-value=9.1e-05 Score=84.08 Aligned_cols=92 Identities=21% Similarity=0.243 Sum_probs=70.6
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhH-HHHhhcCcEEcC---HHHHhccCCEEEecCCCccc--Cc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICA-LQAAMEGFLVVT---MEYAKKYGDIFVTCTGNYHV--IT 880 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~-~~A~~~G~~v~~---~~e~l~~aDvvi~atG~~~v--i~ 880 (1027)
+.|++|+|+|+|.+|+.+++.++..|+ +|+++++++.++ ..|...|..+.+ +.+.+.++|+||+||+.++. +.
T Consensus 176 l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVi~at~~~~~~~~~ 255 (311)
T cd05213 176 LKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADVVISATGAPHYAKIV 255 (311)
T ss_pred ccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCEEEECCCCCchHHHH
Confidence 689999999999999999999999886 799999998765 346666766554 45667789999999998764 12
Q ss_pred HHHHhcC-CCCeEEEEecCC
Q psy15208 881 HDHMRDM-KDQAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~m-k~gailvNvG~~ 899 (1027)
...++.. +.+.++++++..
T Consensus 256 ~~~~~~~~~~~~~viDlavP 275 (311)
T cd05213 256 ERAMKKRSGKPRLIVDLAVP 275 (311)
T ss_pred HHHHhhCCCCCeEEEEeCCC
Confidence 2223333 357789999875
No 254
>KOG0022|consensus
Probab=97.83 E-value=4.6e-05 Score=84.07 Aligned_cols=116 Identities=22% Similarity=0.250 Sum_probs=87.2
Q ss_pred chhhhhhHHHH-HhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH-----
Q psy15208 789 LYGCRESLIDG-IKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME----- 860 (1027)
Q Consensus 789 ~~g~~~s~~~~-i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~----- 860 (1027)
..||+-|+--+ .+...+ .-.|.+++|+|.|.+|+++++-+|+.|| ++|.+|+|+.+...|...|+. .++..
T Consensus 172 LLgCGvsTG~GAa~~~Ak-v~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~ 250 (375)
T KOG0022|consen 172 LLGCGVSTGYGAAWNTAK-VEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKP 250 (375)
T ss_pred Eeeccccccchhhhhhcc-cCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhcccc
Confidence 35666554322 222324 4689999999999999999999999999 899999999999999999986 44433
Q ss_pred --HHhc-----cCCEEEecCCCcccCcHHHHhcCCCC-eEEEEecCC--Ccccchh
Q psy15208 861 --YAKK-----YGDIFVTCTGNYHVITHDHMRDMKDQ-AIVCNIGHF--DNEIEVE 906 (1027)
Q Consensus 861 --e~l~-----~aDvvi~atG~~~vi~~~~~~~mk~g-ailvNvG~~--d~eid~~ 906 (1027)
|.+. ..|+-++|+|+.+++. +.|...+.| +.-+-+|.. ..++.+.
T Consensus 251 i~evi~EmTdgGvDysfEc~G~~~~m~-~al~s~h~GwG~sv~iGv~~~~~~i~~~ 305 (375)
T KOG0022|consen 251 IQEVIIEMTDGGVDYSFECIGNVSTMR-AALESCHKGWGKSVVIGVAAAGQEISTR 305 (375)
T ss_pred HHHHHHHHhcCCceEEEEecCCHHHHH-HHHHHhhcCCCeEEEEEecCCCcccccc
Confidence 2222 3799999999999655 558889888 777777775 3444443
No 255
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.83 E-value=0.00013 Score=79.45 Aligned_cols=139 Identities=14% Similarity=0.192 Sum_probs=90.3
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCc--EEEEEcCCCCCCCCCCCCC---ccchHHHHHHHHHHHHHhCC
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGY--ISIRMNFRGVGASSGTYDS---GNGETDDMEILLRYIQKKYP 105 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy--~Vla~DlrGhG~S~g~~~~---~~~~~~Dv~avl~~L~~~~~ 105 (1027)
+.+.++||+||+. .+++. .....++.....++ .++.+.+|..|.-.+...+ ......++..+++.|....+
T Consensus 16 ~~~~vlvfVHGyn---~~f~~-a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~ 91 (233)
T PF05990_consen 16 PDKEVLVFVHGYN---NSFED-ALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPG 91 (233)
T ss_pred CCCeEEEEEeCCC---CCHHH-HHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccC
Confidence 3578999999983 23333 22334443333344 7999999988764332211 12234555666666666656
Q ss_pred CCcEEEEEechhHHHHHHHHHhcCCc-------CCccEEEEEccCCCcC-------CCCCCCCcEEEEEeCCCCCCChHH
Q psy15208 106 YLPIILAGFSFGTFVQAKLQKRLDKE-------ISIKILILISVAVKKW-------LIPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 106 ~~pviLVGhSmGG~vAl~~A~~~p~~-------~~V~gLVli~p~~~~~-------~l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
..++++++||||+.+.+......... .++..+++.+|..+.. .+.....++.+.+..+|.....+.
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~~~~~~~~~itvy~s~~D~AL~~S~ 171 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLPDLGSSARRITVYYSRNDRALKASR 171 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHHHHhhcCCCEEEEEcCCchHHHHHH
Confidence 67899999999999988876542221 2578999999876532 244556889999999997665554
Q ss_pred HH
Q psy15208 172 VF 173 (1027)
Q Consensus 172 ~~ 173 (1027)
..
T Consensus 172 ~~ 173 (233)
T PF05990_consen 172 RL 173 (233)
T ss_pred HH
Confidence 43
No 256
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.81 E-value=6.8e-05 Score=90.08 Aligned_cols=126 Identities=18% Similarity=0.106 Sum_probs=82.5
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCC-CC---CCCCCCCCCccc
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFR-GV---GASSGTYDSGNG 88 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~Dlr-Gh---G~S~g~~~~~~~ 88 (1027)
.-++.-+|.|......+..|++|++||++...|+.... ....|+.+ ++.|+.+++| |. ..+.........
T Consensus 77 dcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~----~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~ 152 (493)
T cd00312 77 DCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY----PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNY 152 (493)
T ss_pred cCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC----ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcch
Confidence 36777888887522135679999999987666654431 22334433 3999999998 33 222211111223
Q ss_pred hHHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 89 ETDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
-..|...+++|+++. ++. .+|.|+|+|.||..+..++........++++|+.++..
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 478999999999874 333 36999999999999988877632223578888887654
No 257
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.80 E-value=0.00014 Score=80.70 Aligned_cols=108 Identities=17% Similarity=0.339 Sum_probs=79.8
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhC---CcEEEEEcCCCCCCCCCC-----CCCccchHHHHHHHHHHHHH--
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL---GYISIRMNFRGVGASSGT-----YDSGNGETDDMEILLRYIQK-- 102 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~---Gy~Vla~DlrGhG~S~g~-----~~~~~~~~~Dv~avl~~L~~-- 102 (1027)
++.++|+.|.+.. -.+|..+.+.|.++ .+.|++..+.||-.++.. .....++-+.++..++++++
T Consensus 2 ~~li~~IPGNPGl-----v~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGL-----VEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCCh-----HHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 5789999997532 23677787777744 899999999999877654 12334556666655555554
Q ss_pred -hC--CCCcEEEEEechhHHHHHHHHHhcC-CcCCccEEEEEccCCC
Q psy15208 103 -KY--PYLPIILAGFSFGTFVQAKLQKRLD-KEISIKILILISVAVK 145 (1027)
Q Consensus 103 -~~--~~~pviLVGhSmGG~vAl~~A~~~p-~~~~V~gLVli~p~~~ 145 (1027)
.. +..+++|+|||+|+++++.+..+.+ ...+|.+++++-|...
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 32 4567999999999999999999998 2337899999988753
No 258
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=97.80 E-value=3.9e-05 Score=88.62 Aligned_cols=92 Identities=23% Similarity=0.279 Sum_probs=74.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHhc-----cCCEEEecC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAKK-----YGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l~-----~aDvvi~at 873 (1027)
..|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +.+. .+.+. ..|++++++
T Consensus 186 ~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~ 265 (369)
T cd08301 186 KKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECT 265 (369)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECC
Confidence 579999999999999999999999999 899999999888888888875 3321 12221 379999999
Q ss_pred CCcccCcHHHHhcCCCC-eEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQ-AIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~g-ailvNvG~~d 900 (1027)
|....+. ..+..++++ ++++.+|...
T Consensus 266 G~~~~~~-~~~~~~~~~~g~~v~~g~~~ 292 (369)
T cd08301 266 GNIDAMI-SAFECVHDGWGVTVLLGVPH 292 (369)
T ss_pred CChHHHH-HHHHHhhcCCCEEEEECcCC
Confidence 8765444 458889996 9999999764
No 259
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=97.80 E-value=4.2e-05 Score=88.35 Aligned_cols=93 Identities=17% Similarity=0.202 Sum_probs=74.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHh-----ccCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAK-----KYGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l-----~~aDvvi~a 872 (1027)
...|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +.+. .+.+ ...|+|+++
T Consensus 182 ~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~ 261 (365)
T cd08277 182 VEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFEC 261 (365)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEEC
Confidence 4679999999999999999999999999 799999999888888888874 3221 1222 148999999
Q ss_pred CCCcccCcHHHHhcCCCC-eEEEEecCCC
Q psy15208 873 TGNYHVITHDHMRDMKDQ-AIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~g-ailvNvG~~d 900 (1027)
+|....+. +.++.|+++ +.++.+|..+
T Consensus 262 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 289 (365)
T cd08277 262 TGNADLMN-EALESTKLGWGVSVVVGVPP 289 (365)
T ss_pred CCChHHHH-HHHHhcccCCCEEEEEcCCC
Confidence 99765444 458889875 9999999863
No 260
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.79 E-value=0.00035 Score=81.92 Aligned_cols=103 Identities=14% Similarity=0.110 Sum_probs=64.3
Q ss_pred CccEEEEE----CCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCC
Q psy15208 32 LKGVVLIA----HPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYL 107 (1027)
Q Consensus 32 ~~pvVVll----HG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~ 107 (1027)
.+|+||+= ||-+ .+|.+.+ ..+...|. .|+.||.+.+.-.-... .+......-...+++.+....|..
T Consensus 68 krP~vViDPRAGHGpG-IGGFK~d---SevG~AL~-~GHPvYFV~F~p~P~pg---QTl~DV~~ae~~Fv~~V~~~hp~~ 139 (581)
T PF11339_consen 68 KRPFVVIDPRAGHGPG-IGGFKPD---SEVGVALR-AGHPVYFVGFFPEPEPG---QTLEDVMRAEAAFVEEVAERHPDA 139 (581)
T ss_pred CCCeEEeCCCCCCCCC-ccCCCcc---cHHHHHHH-cCCCeEEEEecCCCCCC---CcHHHHHHHHHHHHHHHHHhCCCC
Confidence 45655543 4422 2444432 34556665 49999999885211111 122222223345566666666654
Q ss_pred -cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 108 -PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 108 -pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
+..|+|.|+||+.++++|+.+|+ .+.-+|+.+++.
T Consensus 140 ~kp~liGnCQgGWa~~mlAA~~Pd--~~gplvlaGaPl 175 (581)
T PF11339_consen 140 PKPNLIGNCQGGWAAMMLAALRPD--LVGPLVLAGAPL 175 (581)
T ss_pred CCceEEeccHHHHHHHHHHhcCcC--ccCceeecCCCc
Confidence 78999999999999999999999 677777777653
No 261
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=97.78 E-value=5.3e-05 Score=89.04 Aligned_cols=150 Identities=13% Similarity=0.077 Sum_probs=98.2
Q ss_pred ccCCEEEEEc-CChhHHHHHHHHHhCCC---EEEEEcCCchhHHHHhhc--------CcE--EcC------HHHHh----
Q psy15208 808 IAGKIAVIIG-YGDVGKGSAQAMRALSA---QVWIIEIDPICALQAAME--------GFL--VVT------MEYAK---- 863 (1027)
Q Consensus 808 l~Gk~VvViG-~G~IG~~vA~~a~~~Ga---~ViV~d~dp~r~~~A~~~--------G~~--v~~------~~e~l---- 863 (1027)
..|++|+|+| .|.||..+++.++.+|+ +|+++|.++.|...+... |++ +.+ ..+.+
T Consensus 174 ~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t 253 (410)
T cd08238 174 KPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELT 253 (410)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHh
Confidence 4789999998 69999999999999864 799999999888887775 654 232 11222
Q ss_pred --ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEe-cCCC----cccchhhhhccceeccccceeeeecCC-CcEEEEec
Q psy15208 864 --KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNI-GHFD----NEIEVEKLKKYKWENIKPQVDHIIFPD-GKKIILLA 935 (1027)
Q Consensus 864 --~~aDvvi~atG~~~vi~~~~~~~mk~gailvNv-G~~d----~eid~~~l~~~~~~~~~~~v~~y~~~d-g~~i~LLa 935 (1027)
..+|++++++|....+. ..++.+++++.++.+ |..+ ..+++..+...+........ ....+ .+.+.+++
T Consensus 254 ~g~g~D~vid~~g~~~~~~-~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~li~ 330 (410)
T cd08238 254 GGQGFDDVFVFVPVPELVE-EADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSG--GNTDDMKEAIDLMA 330 (410)
T ss_pred CCCCCCEEEEcCCCHHHHH-HHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCC--CCHHHHHHHHHHHH
Confidence 14799999998776555 458889977766555 4322 23443322211111111111 11111 35777888
Q ss_pred CCccccccCCCCCCcceEehhhHhHHHHHHHHh
Q psy15208 936 EGRLVNLGCGTGHPSYVMSSSFANQTLAQIELF 968 (1027)
Q Consensus 936 ~GrlvNl~~~~G~P~~vmd~sf~~q~la~~~l~ 968 (1027)
+|++ +|..+++..|.+..+...+-.
T Consensus 331 ~g~i--------~~~~~it~~~~l~~~~~A~~~ 355 (410)
T cd08238 331 AGKL--------NPARMVTHIGGLNAAAETTLN 355 (410)
T ss_pred cCCC--------chhhcEEEEecHHHHHHHHHH
Confidence 8888 677788988988887776655
No 262
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.78 E-value=0.00036 Score=82.13 Aligned_cols=123 Identities=11% Similarity=0.038 Sum_probs=78.7
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCc----EEEEEcCCCCCCCCCCCCCccchH
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGY----ISIRMNFRGVGASSGTYDSGNGET 90 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy----~Vla~DlrGhG~S~g~~~~~~~~~ 90 (1027)
.+..+++|.|++.. .++.|+|+++||..+.. ..........|.++|. .++.+|..........++....+.
T Consensus 192 ~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~----~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~ 266 (411)
T PRK10439 192 NSRRVWIYTTGDAA-PEERPLAILLDGQFWAE----SMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFW 266 (411)
T ss_pred CceEEEEEECCCCC-CCCCCEEEEEECHHhhh----cCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHH
Confidence 35677888887643 35689999999964321 1123345556666663 357777632211111222212223
Q ss_pred HHH-HHHHHHHHHhCCC----CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 91 DDM-EILLRYIQKKYPY----LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 91 ~Dv-~avl~~L~~~~~~----~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
..+ .+++-++.+.++. .+.+|.|+||||..|+.++.++|+ .+.+++..++..
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd--~Fg~v~s~Sgs~ 323 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPE--RFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcc--cccEEEEeccce
Confidence 332 4566666666543 358999999999999999999999 789999999864
No 263
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.72 E-value=9.5e-05 Score=82.91 Aligned_cols=89 Identities=15% Similarity=0.185 Sum_probs=72.1
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCCcccCc------HHHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGNYHVIT------HDHM 884 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~------~~~~ 884 (1027)
+|+|||+|.+|..+|..+...|.+|+++|+++.+...+...|.. ..+..+++.++|+||.|......+. ...+
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~~ 80 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGII 80 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchHh
Confidence 48999999999999999999999999999999887777777775 4467888999999999887542221 1235
Q ss_pred hcCCCCeEEEEecCCC
Q psy15208 885 RDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d 900 (1027)
..++++.+++|++...
T Consensus 81 ~~~~~g~iivd~st~~ 96 (291)
T TIGR01505 81 EGAKPGKTLVDMSSIS 96 (291)
T ss_pred hcCCCCCEEEECCCCC
Confidence 6789999999987764
No 264
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=97.72 E-value=0.00011 Score=84.69 Aligned_cols=93 Identities=18% Similarity=0.187 Sum_probs=71.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-hhcCcE-EcC------HHHHhccCCEEEecCCCccc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-AMEGFL-VVT------MEYAKKYGDIFVTCTGNYHV 878 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-~~~G~~-v~~------~~e~l~~aDvvi~atG~~~v 878 (1027)
...|++|+|.|.|.+|..+++.++.+|++|++++.++.+...+ ...|++ +.. +.+.....|++++++|....
T Consensus 178 ~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D~vid~~g~~~~ 257 (357)
T PLN02514 178 KQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDYIIDTVPVFHP 257 (357)
T ss_pred CCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCcEEEECCCchHH
Confidence 3579999999999999999999999999998887777655444 447775 221 11122347999999997654
Q ss_pred CcHHHHhcCCCCeEEEEecCCC
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d 900 (1027)
+. ..++.+++++.++.+|...
T Consensus 258 ~~-~~~~~l~~~G~iv~~G~~~ 278 (357)
T PLN02514 258 LE-PYLSLLKLDGKLILMGVIN 278 (357)
T ss_pred HH-HHHHHhccCCEEEEECCCC
Confidence 44 4589999999999999764
No 265
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.71 E-value=0.00019 Score=82.50 Aligned_cols=108 Identities=20% Similarity=0.175 Sum_probs=76.3
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchH-HHHHHHHHHHHHhCCCCcEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET-DDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~-~Dv~avl~~L~~~~~~~pviL 111 (1027)
+++++++|.+--..=-++-..-.++...|.++|..|+.+++++=..+.+.. .++... +.+...++.+.+..+.+.+.+
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~-~~edYi~e~l~~aid~v~~itg~~~Inl 185 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAK-NLEDYILEGLSEAIDTVKDITGQKDINL 185 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhc-cHHHHHHHHHHHHHHHHHHHhCccccce
Confidence 456789998521000000011246889999999999999998766655432 333333 667777788877777778999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+|+|+||.+...+++.++.+ +++.++++..
T Consensus 186 iGyCvGGtl~~~ala~~~~k-~I~S~T~lts 215 (445)
T COG3243 186 IGYCVGGTLLAAALALMAAK-RIKSLTLLTS 215 (445)
T ss_pred eeEecchHHHHHHHHhhhhc-ccccceeeec
Confidence 99999999999999988874 5888887764
No 266
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=97.71 E-value=0.00029 Score=76.36 Aligned_cols=95 Identities=20% Similarity=0.188 Sum_probs=74.0
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEcCC----chhH--------HHHhhcCc-EE-cCHHHHhccC
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIEID----PICA--------LQAAMEGF-LV-VTMEYAKKYG 866 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~d----p~r~--------~~A~~~G~-~v-~~~~e~l~~a 866 (1027)
.+..+.+++|+|+|+|..|+++|..+...|+ +|.++|++ ..|. ..+...+. .. .++.+++.++
T Consensus 19 ~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~~~l~~~l~~~ 98 (226)
T cd05311 19 VGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTGGTLKEALKGA 98 (226)
T ss_pred hCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCcccCCHHHHHhcC
Confidence 4556899999999999999999999999998 49999998 3332 12333321 11 3577888899
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|++|.+|+ .++++.+.++.|+++.++......
T Consensus 99 dvlIgaT~-~G~~~~~~l~~m~~~~ivf~lsnP 130 (226)
T cd05311 99 DVFIGVSR-PGVVKKEMIKKMAKDPIVFALANP 130 (226)
T ss_pred CEEEeCCC-CCCCCHHHHHhhCCCCEEEEeCCC
Confidence 99999998 788999999999988887766543
No 267
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.70 E-value=0.00021 Score=83.17 Aligned_cols=93 Identities=20% Similarity=0.233 Sum_probs=76.3
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHH-HhhcCcEEcCHHH---HhccCCEEEecCCCc-ccCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQ-AAMEGFLVVTMEY---AKKYGDIFVTCTGNY-HVIT 880 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~-A~~~G~~v~~~~e---~l~~aDvvi~atG~~-~vi~ 880 (1027)
.|.+++|+|+|+|-+|..+|+.|...|. +|+|+.++..|+.+ |...|..+.++++ .+.++||||++||.+ .+++
T Consensus 175 ~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~~ii~ 254 (414)
T COG0373 175 SLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPHPIIT 254 (414)
T ss_pred ccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCccccC
Confidence 4899999999999999999999999996 89999999988774 8888988777665 467899999999876 5777
Q ss_pred HHHHhcC-CC--CeEEEEecCC
Q psy15208 881 HDHMRDM-KD--QAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~m-k~--gailvNvG~~ 899 (1027)
.+.+... +. .=++++++.+
T Consensus 255 ~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 255 REMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred HHHHHHHHhcccCeEEEEecCC
Confidence 7766543 22 2478888886
No 268
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.67 E-value=0.00017 Score=80.92 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=73.6
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcc----cCc--HHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYH----VIT--HDH 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~----vi~--~~~ 883 (1027)
++|+|+|.|.+|..+|+.++..|.+|+++|+++.+...+...|..+ .+.++++.++|+||.++.... ++. ...
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~~ 82 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENGI 82 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcchH
Confidence 4799999999999999999999999999999998777667777764 467888899999999886542 221 123
Q ss_pred HhcCCCCeEEEEecCCCc
Q psy15208 884 MRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~ 901 (1027)
+..+++|.+++|++....
T Consensus 83 ~~~~~~g~iiid~st~~~ 100 (296)
T PRK11559 83 IEGAKPGTVVIDMSSIAP 100 (296)
T ss_pred hhcCCCCcEEEECCCCCH
Confidence 567899999999988753
No 269
>PLN00203 glutamyl-tRNA reductase
Probab=97.65 E-value=0.00017 Score=86.84 Aligned_cols=92 Identities=13% Similarity=0.128 Sum_probs=72.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHh-hc-CcE--Ec---CHHHHhccCCEEEecCCCc-cc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAA-ME-GFL--VV---TMEYAKKYGDIFVTCTGNY-HV 878 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~-~~-G~~--v~---~~~e~l~~aDvvi~atG~~-~v 878 (1027)
+.+++|+|+|+|.+|+.+++.|...|+ +|+++++++.++.... .. |.. +. ++.+++.++|+||+||+.. .+
T Consensus 264 l~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~pv 343 (519)
T PLN00203 264 HASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSETPL 343 (519)
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence 789999999999999999999999998 7999999987765433 22 332 22 3556778999999999764 58
Q ss_pred CcHHHHhcCCCC-------eEEEEecCC
Q psy15208 879 ITHDHMRDMKDQ-------AIVCNIGHF 899 (1027)
Q Consensus 879 i~~~~~~~mk~g-------ailvNvG~~ 899 (1027)
+..++++.++++ -++++++..
T Consensus 344 I~~e~l~~~~~~~~~~~~~~~~IDLAvP 371 (519)
T PLN00203 344 FLKEHVEALPPASDTVGGKRLFVDISVP 371 (519)
T ss_pred eCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence 899999887432 378888886
No 270
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.63 E-value=4.8e-05 Score=81.85 Aligned_cols=89 Identities=13% Similarity=0.147 Sum_probs=54.0
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcE---EEEEcCCCCCCCCCC--CCCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYI---SIRMNFRGVGASSGT--YDSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~---Vla~DlrGhG~S~g~--~~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
+|||+||.. ++.. ..|..+++.|.++||. ++++++-....+... .......+.+++++++.+...-+. +|
T Consensus 3 PVVlVHG~~---~~~~-~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kV 77 (219)
T PF01674_consen 3 PVVLVHGTG---GNAY-SNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KV 77 (219)
T ss_dssp -EEEE--TT---TTTC-GGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---E
T ss_pred CEEEECCCC---cchh-hCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EE
Confidence 469999973 3222 2477899999999999 799999443332210 000112346778888888776566 99
Q ss_pred EEEEechhHHHHHHHHHhc
Q psy15208 110 ILAGFSFGTFVQAKLQKRL 128 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~ 128 (1027)
-||||||||.++..+....
T Consensus 78 DIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEEETCHHHHHHHHHHHC
T ss_pred EEEEcCCcCHHHHHHHHHc
Confidence 9999999999998887643
No 271
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.63 E-value=0.001 Score=77.84 Aligned_cols=123 Identities=11% Similarity=0.077 Sum_probs=74.4
Q ss_pred EEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCC---CCCCC
Q psy15208 8 FNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGAS---SGTYD 84 (1027)
Q Consensus 8 i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S---~g~~~ 84 (1027)
+.+..+-.++ +.|.|........+|.||++..+ .+..-. ..+++.+.|.+ |+.|+..|+..-+.. .+.+
T Consensus 79 vV~~~~~~~L--~~y~~~~~~~~~~~~pvLiV~Pl---~g~~~~-L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f- 150 (406)
T TIGR01849 79 VVWDKPFCRL--IHFKRQGFRAELPGPAVLIVAPM---SGHYAT-LLRSTVEALLP-DHDVYITDWVNARMVPLSAGKF- 150 (406)
T ss_pred EEEECCCeEE--EEECCCCcccccCCCcEEEEcCC---chHHHH-HHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCC-
Confidence 4444443333 44455431101123677888876 333222 34789999999 999999999776643 3443
Q ss_pred CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc---CCccEEEEEccC
Q psy15208 85 SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE---ISIKILILISVA 143 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~---~~V~gLVli~p~ 143 (1027)
.+++.++-+..+++.+ +. ++.|+|+||||..++.+++.+.+. .+++.+++++++
T Consensus 151 ~ldDYi~~l~~~i~~~----G~-~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~P 207 (406)
T TIGR01849 151 DLEDYIDYLIEFIRFL----GP-DIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGP 207 (406)
T ss_pred CHHHHHHHHHHHHHHh----CC-CCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecC
Confidence 3333343333333322 33 389999999999988777765331 158999988763
No 272
>KOG0023|consensus
Probab=97.62 E-value=0.00015 Score=80.51 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=77.2
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cCcEE--cC------HHHHhccCCEEEecCC-
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EGFLV--VT------MEYAKKYGDIFVTCTG- 874 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G~~v--~~------~~e~l~~aDvvi~atG- 874 (1027)
|+. +|+.|+|+|.|.+|....+.++++|++|+|.+....+.++|.. +|++. .. ++++...-|.++.++.
T Consensus 178 g~~-pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~ 256 (360)
T KOG0023|consen 178 GLG-PGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSN 256 (360)
T ss_pred CCC-CCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeee
Confidence 654 9999999999999999999999999999999998855555554 88872 22 2333444577776665
Q ss_pred -CcccCcHHHHhcCCCCeEEEEecCCCcccchhh
Q psy15208 875 -NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEK 907 (1027)
Q Consensus 875 -~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~ 907 (1027)
..+.+.. .+..||.++.++.+|.....+.++.
T Consensus 257 ~a~~~~~~-~~~~lk~~Gt~V~vg~p~~~~~~~~ 289 (360)
T KOG0023|consen 257 LAEHALEP-LLGLLKVNGTLVLVGLPEKPLKLDT 289 (360)
T ss_pred ccccchHH-HHHHhhcCCEEEEEeCcCCcccccc
Confidence 4555554 4899999999999999865665553
No 273
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.62 E-value=0.00025 Score=79.29 Aligned_cols=105 Identities=15% Similarity=0.160 Sum_probs=71.6
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHHHHhh-cC----cEE-cCHHHHhccC
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICALQAAM-EG----FLV-VTMEYAKKYG 866 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~A~~-~G----~~v-~~~~e~l~~a 866 (1027)
.++...+.+..+..+.+++|+|+|+|.+|+.++..++..| ++|+|+++++.++..... .+ +.+ .+..+.+.++
T Consensus 107 ~G~~~~l~~~~~~~~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~ 186 (278)
T PRK00258 107 IGFVRALEERLGVDLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDLELQEELADF 186 (278)
T ss_pred HHHHHHHHhccCCCCCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecccchhccccC
Confidence 5677777653455689999999999999999999999999 599999999876644322 11 122 2334666789
Q ss_pred CEEEecCCCccc----CcHHHHhcCCCCeEEEEecC
Q psy15208 867 DIFVTCTGNYHV----ITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 867 Dvvi~atG~~~v----i~~~~~~~mk~gailvNvG~ 898 (1027)
|+||+||+..-- ...-..+.+++++.++.+-.
T Consensus 187 DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 187 DLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence 999999853210 01111345666777766644
No 274
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.61 E-value=0.00071 Score=74.61 Aligned_cols=134 Identities=18% Similarity=0.275 Sum_probs=83.4
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHH-hCCc--EEEE--EcCCCC----CCCC---CCC------C-----CccchHH
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGY--ISIR--MNFRGV----GASS---GTY------D-----SGNGETD 91 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy--~Vla--~DlrGh----G~S~---g~~------~-----~~~~~~~ 91 (1027)
+.||+||++ |+.. .+..++..+. +.|. .++. ++--|+ |.-. ..+ . +....+.
T Consensus 13 PTifihG~~---gt~~--s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 13 PTIFIHGYG---GTAN--SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp EEEEE--TT---GGCC--CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred cEEEECCCC---CChh--HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 459999984 3332 3667888886 5554 3433 333333 2211 110 1 1223456
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc---CCccEEEEEccCCCcCC--------------------
Q psy15208 92 DMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE---ISIKILILISVAVKKWL-------------------- 148 (1027)
Q Consensus 92 Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~---~~V~gLVli~p~~~~~~-------------------- 148 (1027)
-+..++.+|..+|....+-+|||||||..++.++..+... +.+..+|.++++.....
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~ 167 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMT 167 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCcccC
Confidence 6678889999999999999999999999999999886442 35899999987644220
Q ss_pred --------C--CCC--CCcEEEEEeC------CCCCCChHHHH
Q psy15208 149 --------I--PEV--PKNTIIIHGE------LDEIIPLKDVF 173 (1027)
Q Consensus 149 --------l--~~i--~~PvLiIhG~------~D~iVP~~~~~ 173 (1027)
. ..+ ...+|-|.|. .|..||..++.
T Consensus 168 ~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~ 210 (255)
T PF06028_consen 168 PMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSL 210 (255)
T ss_dssp HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHC
T ss_pred HHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHH
Confidence 1 112 2568999999 89999999876
No 275
>PRK04439 S-adenosylmethionine synthetase; Provisional
Probab=97.57 E-value=0.0096 Score=68.32 Aligned_cols=305 Identities=19% Similarity=0.257 Sum_probs=179.0
Q ss_pred eeccccCCCCccccchhhhhhHHHH----HHhh---------Cccc--------ccccccccccceeeeeeeeeeccc--
Q psy15208 185 VIPESVSEGHPDKIADQISDAILDE----IFLK---------DLKA--------RVAAETLCNNNLIVLSGEITTDAN-- 241 (1027)
Q Consensus 185 ~t~Esv~~GHPdkvaDqIsdaILD~----~L~~---------Dp~s--------rva~e~l~~~~~v~v~GEist~~~-- 241 (1027)
...|.-+.||||.+||.+++++-.+ ++++ |+-- +..--.+...=.+++.|.+|+...
T Consensus 20 EiVERKGiGHPDticD~iaE~~S~~Ls~~Yl~~fG~ILHHN~DK~llvgG~s~p~fGGG~vi~Pi~ii~~GRAt~~~~g~ 99 (399)
T PRK04439 20 EIVERKGIGHPDTICDGIAEAVSRALSRYYLEKFGAILHHNTDKVLLVGGRSAPKFGGGEVIEPIYIILGGRATKEVGGE 99 (399)
T ss_pred EEEeecCCCCChHHHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEccEEeccCCCceEEeeEEEEEecceeeeECCe
Confidence 3334455799999999888765433 3332 2221 111212233334578999887543
Q ss_pred -hhHHHHH----HHHhhh-cCCCCCCCCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCC
Q psy15208 242 -IDYVNIV----RKTIKD-IGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPEL 315 (1027)
Q Consensus 242 -~d~~~~~----r~~l~~-iGy~~~~~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~ 315 (1027)
+.+.+|+ |+.|++ +-+-+.+. ..-+...+.+-|+|......+... -.+|-|-.+..|||-
T Consensus 100 ~iPv~~Ia~~Aak~~L~~~l~~lD~e~-----hv~i~~~i~~GS~dL~~vF~r~~~---vp~ANDTS~gVGyAP------ 165 (399)
T PRK04439 100 EIPVGEIAIEAAKEYLRENLRNLDPER-----HVIIDVRLGPGSTDLVDVFERESI---VPLANDTSFGVGYAP------ 165 (399)
T ss_pred EecHHHHHHHHHHHHHHHhCccCCccc-----cEEEEEeeCCCcHHHHHHhCCCCC---ccccccccceeecCC------
Confidence 6666665 556665 33322221 134555678999999876654321 348999999999984
Q ss_pred CCcHHHHHHHHHHHHHHHHHc----CCCCCCCCCCceeEEEEecCCceeEEeEEEEe----eccCCCCC-hHHHHHHHHH
Q psy15208 316 MPSAIYYSHLIVKRQSELRKN----GNLPWLRPDAKSQVTLRYDNGKPVAIDTIVLS----TQHDPEIP-YRSIKEAAIE 386 (1027)
Q Consensus 316 mp~~~~~a~~l~~~~~~~r~~----~~~~~~~pd~k~qv~~~y~~~~~~~~~~~~~s----~qh~~~~~-~~~~~~~~~~ 386 (1027)
|+ --.+|+..++..-.+ ..+|+.+.|-|.- -+.+|+-+.+ .|. ..|-.+++ .-+.++.+.+
T Consensus 166 --lS--~~E~~Vl~~E~~lns~~~k~~~P~~GeDiKVM---G~R~g~~i~l---TVa~a~v~r~v~~~~~Y~~~k~~v~~ 235 (399)
T PRK04439 166 --LS--ETERLVLETERYLNSEEFKKRFPEVGEDIKVM---GLRNGDEITL---TIAMALVDRYVNDVDEYFEVKEEVKE 235 (399)
T ss_pred --CC--HHHHHHHHHHHHhcCcchhhcCCCcCCCeEEE---EEEcCCEEEE---EEEhHHhhhhcCCHHHHHHHHHHHHH
Confidence 22 123444444444322 3689999999974 2334432332 222 13333332 3345555555
Q ss_pred HhhhcccCCCCC-CCceEEECCCCCceecC----------CCCccccCCceeEEecC-CCcccCCCccccCCCC-Cccch
Q psy15208 387 EIIRPIIPKNLL-KNTRYLINPTGRFVIGG----------PKGDCGLTGRKIIVDTY-GGAAPHGGGAFSGKDP-SKIDR 453 (1027)
Q Consensus 387 ~vi~~~~~~~~~-~~~~~~inp~g~f~~gg----------p~~d~gltgrk~~vdty-gg~~~hggga~sgkd~-tkvdr 453 (1027)
++-.-+ . ++. .+..++||....--.|| =+||.|.+||=.=|--- -.+-|-+==|-+||.| +-|=.
T Consensus 236 ~v~~~a-~-~~~~~~v~v~iNt~D~~~~~~~YLTVtGTSAE~GDdG~VGRGNRvNGLITp~RPMSmEAaAGKNPv~HVGK 313 (399)
T PRK04439 236 KVEDLA-Q-KYTDRDVEVHINTADDPDEGGVYLTVTGTSAEMGDDGSVGRGNRVNGLITPNRPMSMEAAAGKNPVNHVGK 313 (399)
T ss_pred HHHHHH-H-hhCCCceEEEEeCCCCCCCCcEEEEeceeehhccCCcccCcCcccCcccCCCCCccccccCCCCCcccchH
Confidence 544432 2 222 35788899866532222 26899999995433210 0222334557899998 45666
Q ss_pred hhhhHHHHHHHHhhhh--hccceeeeEEEEeeccc--cceEEEEeecCCCCCCh----HHHHHHHHHhcCC
Q psy15208 454 SAAYVGRYIAKNIVAA--NLAKRCQIQISYAIGVA--KPTSIMVTSFGSGKISD----EKLTMLVKKHFDL 516 (1027)
Q Consensus 454 s~ay~ar~~ak~~v~~--g~a~~~~vq~~yaig~~--~p~s~~v~~~~t~~~~~----~~~~~~~~~~f~~ 516 (1027)
-=..+|.-||+.|++. | .++|.|.|---||.| +|..+.|...-....+- +++++++.+.++-
T Consensus 314 IYNvlA~~iA~~i~~~v~g-v~ev~V~llSqIG~PId~P~~a~v~v~~~~g~~~~~~~~~v~~I~~~~L~~ 383 (399)
T PRK04439 314 IYNVLANRIAREIYEEVEG-VKEVYVRLLSQIGKPIDEPLVASIQVIPEDGVLISDVEKEVEEIVDEELAN 383 (399)
T ss_pred HHHHHHHHHHHHHHHhcCC-ceEEEEEEeccCCCcCCCCeEEEEEEecCCCCChHHHHHHHHHHHHHHHhc
Confidence 6678899999999984 5 679999988889976 78877777653322332 2356666655543
No 276
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.56 E-value=0.00022 Score=82.06 Aligned_cols=91 Identities=18% Similarity=0.114 Sum_probs=71.9
Q ss_pred ccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hcCcE-EcC------HHHHhc-----cCCEEEecC
Q psy15208 808 IAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAA-MEGFL-VVT------MEYAKK-----YGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~~------~~e~l~-----~aDvvi~at 873 (1027)
..|++|+|.|. |.||..+++.++.+|++|++++.++.+...+. ..|++ +.+ ..+.+. ..|++++++
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~v 236 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNV 236 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECC
Confidence 57999999999 99999999999999999999988887776665 57874 222 222222 379999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|.. .+ ...++.++++|.++.+|...
T Consensus 237 G~~-~~-~~~~~~l~~~G~iv~~G~~~ 261 (348)
T PLN03154 237 GGD-ML-DAALLNMKIHGRIAVCGMVS 261 (348)
T ss_pred CHH-HH-HHHHHHhccCCEEEEECccc
Confidence 975 33 45689999999999999753
No 277
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.55 E-value=0.00023 Score=80.54 Aligned_cols=92 Identities=21% Similarity=0.241 Sum_probs=72.3
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHHHhhcCcE---EcCHHHHhccCCEEEecCCCccc--CcHH
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQAAMEGFL---VVTMEYAKKYGDIFVTCTGNYHV--ITHD 882 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~~~v--i~~~ 882 (1027)
-++|+|+|+|.+|..+|..++..|. +|+++|+++.+...+...|.. ..+.++++.++|+||.|++.... +-.+
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~~ 85 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAAE 85 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence 4689999999999999999999885 899999999877777777752 23567788899999999976431 1223
Q ss_pred HHhcCCCCeEEEEecCCCc
Q psy15208 883 HMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~ 901 (1027)
....++++++++++|....
T Consensus 86 l~~~l~~~~iv~dvgs~k~ 104 (307)
T PRK07502 86 IAPHLKPGAIVTDVGSVKA 104 (307)
T ss_pred HHhhCCCCCEEEeCccchH
Confidence 3456899999999988653
No 278
>PLN02712 arogenate dehydrogenase
Probab=97.55 E-value=0.00027 Score=87.90 Aligned_cols=97 Identities=13% Similarity=0.134 Sum_probs=74.5
Q ss_pred hcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhc-cCCEEEecCCCc---c
Q psy15208 803 ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKK-YGDIFVTCTGNY---H 877 (1027)
Q Consensus 803 ~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~-~aDvvi~atG~~---~ 877 (1027)
..+..+.+++|+|||+|.+|..+|+.++..|.+|+++|+++.. ..+...|+.. .+.++++. .+|+||.|+... .
T Consensus 362 ~~~~~~~~~kIgIIGlG~mG~slA~~L~~~G~~V~~~dr~~~~-~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~ 440 (667)
T PLN02712 362 GCVNDGSKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRSDYS-DEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEK 440 (667)
T ss_pred hccCCCCCCEEEEEecCHHHHHHHHHHHHCcCEEEEEECChHH-HHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHH
Confidence 3455678899999999999999999999999999999988643 4466678763 35777665 589999998643 3
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d 900 (1027)
++..-....||+|++++++|...
T Consensus 441 vi~~l~~~~lk~g~ivvDv~SvK 463 (667)
T PLN02712 441 VLKSLPFQRLKRSTLFVDVLSVK 463 (667)
T ss_pred HHHHHHHhcCCCCcEEEECCCcc
Confidence 33332233689999999999875
No 279
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=97.55 E-value=0.00023 Score=81.37 Aligned_cols=93 Identities=17% Similarity=0.259 Sum_probs=73.6
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHH----Hhc--cCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEY----AKK--YGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e----~l~--~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +++ ..+ ... ..|++++++|
T Consensus 171 ~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g 250 (351)
T cd08233 171 KPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAG 250 (351)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHHHHhCCCCCCEEEECCC
Confidence 579999999999999999999999999 899998888887777777775 222 111 121 3899999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
....+. ..++.|++++.++.+|....
T Consensus 251 ~~~~~~-~~~~~l~~~G~~v~~g~~~~ 276 (351)
T cd08233 251 VQATLD-TAIDALRPRGTAVNVAIWEK 276 (351)
T ss_pred CHHHHH-HHHHhccCCCEEEEEccCCC
Confidence 765444 55889999999999998643
No 280
>PF01941 AdoMet_Synthase: S-adenosylmethionine synthetase (AdoMet synthetase); InterPro: IPR002795 A highly diverged class of S-adenosylmethionine synthetases have been identified in the archaea. S-adenosylmethionine is the primary alkylating agent in all known organisms. ATP:L-methionine S-adenosyltransferase (MAT) catalyses the only known biosynthetic route to this central metabolite. Although the amino acid sequence of MAT is strongly conserved among bacteria and eukarya (see IPR002133 from INTERPRO) no homologues had been recognised in the completed genome sequences of any archaea. The identification of a second major class of MAT emphasises the long evolutionary history of the archaeal lineage and the structural diversity found even in crucial metabolic enzymes []. Three bacterial genomes encode both the archaeal and eukaryotic/bacterial types of MAT [].; GO: 0004478 methionine adenosyltransferase activity, 0005524 ATP binding, 0006730 one-carbon metabolic process
Probab=97.55 E-value=0.0098 Score=68.17 Aligned_cols=306 Identities=19% Similarity=0.254 Sum_probs=180.8
Q ss_pred ccccCCCCccccchhhhhhHHHH----HHhh---------Ccc--------cccccccccccceeeeeeeeeecc---ch
Q psy15208 187 PESVSEGHPDKIADQISDAILDE----IFLK---------DLK--------ARVAAETLCNNNLIVLSGEITTDA---NI 242 (1027)
Q Consensus 187 ~Esv~~GHPdkvaDqIsdaILD~----~L~~---------Dp~--------srva~e~l~~~~~v~v~GEist~~---~~ 242 (1027)
.|.-+.||||.+||.+++++-.+ +++. |+- ++..--.+...=.|+++|.+|+.. .+
T Consensus 22 VERKGiGHPDtIcD~iaE~vS~~Ls~~Yl~~fG~ILHHN~DK~llvgG~s~p~fGGG~vi~Pi~ii~~GRAt~~~~~~~i 101 (396)
T PF01941_consen 22 VERKGIGHPDTICDGIAEAVSRALSRYYLERFGAILHHNTDKVLLVGGRSEPKFGGGEVIEPIYIILGGRATKEVGGEKI 101 (396)
T ss_pred EEecCCCCChHHHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEccEEeccCCCceeeeeEEEEEecceeeccCCeec
Confidence 34445799999999988766433 3332 221 122222333444577899988864 56
Q ss_pred hHHHHH----HHHhhh-cCCCCCCCCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCC
Q psy15208 243 DYVNIV----RKTIKD-IGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMP 317 (1027)
Q Consensus 243 d~~~~~----r~~l~~-iGy~~~~~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp 317 (1027)
.+.+|+ |+.|++ +-+-+.+ +..-+...+.+-|+|+.....+... -.+|-|-.+..|||-=.
T Consensus 102 Pv~~Ia~~aak~~l~~~l~~lD~e-----~hv~i~~~i~~GS~dL~dvf~r~~~---vp~ANDTS~gVGyAPlS------ 167 (396)
T PF01941_consen 102 PVDEIAIEAAKEWLRENLRFLDPE-----RHVIIDCRIGPGSPDLVDVFERGKK---VPLANDTSFGVGYAPLS------ 167 (396)
T ss_pred cHHHHHHHHHHHHHHHhcccCCcc-----ccEEEEEeeCCCChHHHHHhccccc---ccccCCccceeccCCcc------
Confidence 666664 555555 2222211 1234555688999999887766432 35899999999998322
Q ss_pred cHHHHHHHHHHHHHHHHHc----CCCCCCCCCCceeEEEEecCCceeEE--eEEEEeeccCCCCC-hHHHHHHHHHHhhh
Q psy15208 318 SAIYYSHLIVKRQSELRKN----GNLPWLRPDAKSQVTLRYDNGKPVAI--DTIVLSTQHDPEIP-YRSIKEAAIEEIIR 390 (1027)
Q Consensus 318 ~~~~~a~~l~~~~~~~r~~----~~~~~~~pd~k~qv~~~y~~~~~~~~--~~~~~s~qh~~~~~-~~~~~~~~~~~vi~ 390 (1027)
-..+|+..++..-.+ ..+|+.+.|-|.-- + .+|+-+.+ ..-.|| .|-.+.+ .-+.++.+++.+-.
T Consensus 168 ----~~E~~Vl~~Er~lns~~fk~~~p~~GeDiKVMG-~--R~g~~i~LTvA~a~v~-r~v~~~~~Y~~~k~~v~~~v~~ 239 (396)
T PF01941_consen 168 ----ETEKLVLETERYLNSPEFKKKFPEVGEDIKVMG-L--REGDKITLTVAMAFVD-RYVSSLDEYFERKEEVKEEVED 239 (396)
T ss_pred ----HHHHHHHHHHHHhccccccccCCCcCCCeEEEE-E--EeCCEEEEEEEhhhhh-hhcCCHHHHHHHHHHHHHHHHH
Confidence 223344444433322 35899999999743 3 34432332 111111 2222222 22445555444433
Q ss_pred cccCCCCCCCceEEECCCCCceecCC----------CCccccCCceeEEecC-CCcccCCCccccCCCC-CccchhhhhH
Q psy15208 391 PIIPKNLLKNTRYLINPTGRFVIGGP----------KGDCGLTGRKIIVDTY-GGAAPHGGGAFSGKDP-SKIDRSAAYV 458 (1027)
Q Consensus 391 ~~~~~~~~~~~~~~inp~g~f~~ggp----------~~d~gltgrk~~vdty-gg~~~hggga~sgkd~-tkvdrs~ay~ 458 (1027)
.+.+....+.+++||..-.--.||+ +||.|.+||=.=|--- -.+-|-+==|-+||.| +-|=.-=..+
T Consensus 240 -~a~~~~~~~v~v~iNt~D~~~~~~~YLTvtGTSAE~GDdG~VGRGNRvNGLITp~RPMSmEAaAGKNPv~HVGKIYNvl 318 (396)
T PF01941_consen 240 -YAAKYTDRDVEVHINTADDPEEGGVYLTVTGTSAEMGDDGSVGRGNRVNGLITPNRPMSMEAAAGKNPVNHVGKIYNVL 318 (396)
T ss_pred -HHHHhcCCceEEEEECCCCCCCCcEEEEeceeeccccCCcccCcccccccccCCCCCCcccccCCCCCcchhhHHHHHH
Confidence 2322223456888988764333333 6999999995533210 0223445668899999 4566667888
Q ss_pred HHHHHHHhhhh-hccceeeeEEEEeeccc--cceEEEEeecCCCCCCh----HHHHHHHHHhcC
Q psy15208 459 GRYIAKNIVAA-NLAKRCQIQISYAIGVA--KPTSIMVTSFGSGKISD----EKLTMLVKKHFD 515 (1027)
Q Consensus 459 ar~~ak~~v~~-g~a~~~~vq~~yaig~~--~p~s~~v~~~~t~~~~~----~~~~~~~~~~f~ 515 (1027)
|.-||+.|++. .=.++|.|.|---||.| +|..+.|..-....+.- ++++++|.+.++
T Consensus 319 A~~iA~~I~~~v~gv~ev~V~llSqIG~PId~P~~~~v~i~~~~~~~~~~~~~~v~~Ii~~~L~ 382 (396)
T PF01941_consen 319 ANEIAQRIYEEVDGVEEVYVRLLSQIGKPIDEPQIASVQIIPEDGVLLEDVEKEVEEIIDEELA 382 (396)
T ss_pred HHHHHHHHHHhcCCcceEEEEEccccCCCCCCCeEEEEEEecCCCCchHHHHHHHHHHHHHHHh
Confidence 99999999984 22568889888889954 89888887766554332 346666655443
No 281
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=97.54 E-value=0.00031 Score=79.20 Aligned_cols=91 Identities=14% Similarity=0.218 Sum_probs=73.8
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCCcccCcH------HH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGNYHVITH------DH 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~~------~~ 883 (1027)
++|+|+|.|.+|..+|..+...|.+|+++|+++.+..+....|.. ..+..+++.++|+||.|+.+...+.. ..
T Consensus 2 ~~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~i 81 (296)
T PRK15461 2 AAIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENGV 81 (296)
T ss_pred CeEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcccH
Confidence 379999999999999999999999999999999887777777775 45678888999999999876532221 22
Q ss_pred HhcCCCCeEEEEecCCCc
Q psy15208 884 MRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~ 901 (1027)
+..+++|.+++|++..+.
T Consensus 82 ~~~l~~g~lvid~sT~~p 99 (296)
T PRK15461 82 CEGLSRDALVIDMSTIHP 99 (296)
T ss_pred hhcCCCCCEEEECCCCCH
Confidence 456889999999998753
No 282
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=97.54 E-value=0.00011 Score=71.64 Aligned_cols=86 Identities=16% Similarity=0.213 Sum_probs=68.8
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHH----hc--cCCEEEecCCCcccCcHHHHhcC
Q psy15208 820 DVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYA----KK--YGDIFVTCTGNYHVITHDHMRDM 887 (1027)
Q Consensus 820 ~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~----l~--~aDvvi~atG~~~vi~~~~~~~m 887 (1027)
+||..+++.|+.+|++|++++.++.+...+...|++ +.+ ..+. .. ..|+||+|+|+...+. ..++.+
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~-~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQ-EAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHH-HHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHH-HHHHHh
Confidence 589999999999999999999999999999999975 322 2222 22 3899999999887555 559999
Q ss_pred CCCeEEEEecCCC-cccchh
Q psy15208 888 KDQAIVCNIGHFD-NEIEVE 906 (1027)
Q Consensus 888 k~gailvNvG~~d-~eid~~ 906 (1027)
+++|.++.+|... ..+.++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~ 99 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFN 99 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEE
T ss_pred ccCCEEEEEEccCCCCCCCC
Confidence 9999999999986 444433
No 283
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.53 E-value=9.1e-05 Score=70.33 Aligned_cols=90 Identities=17% Similarity=0.194 Sum_probs=64.5
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE--cCHHHHhccCCEEEecCCCcccCcHHHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV--VTMEYAKKYGDIFVTCTGNYHVITHDHM 884 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v--~~~~e~l~~aDvvi~atG~~~vi~~~~~ 884 (1027)
.+.|++|+|+|.|.+|..-++.+...||+|+|+..+. ......++. -..++.+..+|+|+.||+++. ++.+..
T Consensus 4 ~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~----~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~-~n~~i~ 78 (103)
T PF13241_consen 4 DLKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI----EFSEGLIQLIRREFEEDLDGADLVFAATDDPE-LNEAIY 78 (103)
T ss_dssp --TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE----HHHHTSCEEEESS-GGGCTTESEEEE-SS-HH-HHHHHH
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch----hhhhhHHHHHhhhHHHHHhhheEEEecCCCHH-HHHHHH
Confidence 5789999999999999999999999999999997764 111123332 234566788999999998876 676766
Q ss_pred hcCCCCeEEEEecCCCc
Q psy15208 885 RDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d~ 901 (1027)
+..+.-++++|+.-.+.
T Consensus 79 ~~a~~~~i~vn~~D~p~ 95 (103)
T PF13241_consen 79 ADARARGILVNVVDDPE 95 (103)
T ss_dssp HHHHHTTSEEEETT-CC
T ss_pred HHHhhCCEEEEECCCcC
Confidence 77787889999866543
No 284
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.52 E-value=0.00017 Score=82.47 Aligned_cols=114 Identities=20% Similarity=0.207 Sum_probs=67.8
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHh---CCcEEEEEcCCCCCCCCCCCCC----ccchHHHHHHHHHHHHHh
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS---LGYISIRMNFRGVGASSGTYDS----GNGETDDMEILLRYIQKK 103 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~---~Gy~Vla~DlrGhG~S~g~~~~----~~~~~~Dv~avl~~L~~~ 103 (1027)
..+|++|++|||.... ....+...+.+.|.. ..+.|+++|+..- +...|.. .......+..++.+|...
T Consensus 69 ~~~pt~iiiHGw~~~~--~~~~~~~~~~~all~~~~~d~NVI~VDWs~~--a~~~Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSG--SSESWIQDMIKALLQKDTGDYNVIVVDWSRG--ASNNYPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp TTSEEEEEE--TT-TT---TTTHHHHHHHHHHCC--S-EEEEEEE-HHH--HSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcc--cchhHHHHHHHHHHhhccCCceEEEEcchhh--ccccccchhhhHHHHHHHHHHHHHHHHhh
Confidence 3689999999985432 122345566665544 4899999999521 1112211 122344455666666632
Q ss_pred --CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC
Q psy15208 104 --YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL 148 (1027)
Q Consensus 104 --~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~ 148 (1027)
.+...++|+|||+||.+|-.++.......++..+..++|+.+.|.
T Consensus 145 ~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 145 FGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp H---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTT
T ss_pred cCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccccc
Confidence 344579999999999999999988765346899999999987663
No 285
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=97.51 E-value=0.00047 Score=74.78 Aligned_cols=96 Identities=23% Similarity=0.258 Sum_probs=68.9
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEE-EEcC----------CchhHHHHhh-cC-------cEEcCHHHHh-c
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVW-IIEI----------DPICALQAAM-EG-------FLVVTMEYAK-K 864 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~Vi-V~d~----------dp~r~~~A~~-~G-------~~v~~~~e~l-~ 864 (1027)
+..+.|++|+|.|+|.||+.+|+.+..+|++|+ |.|. |+........ .| .+.++.++.+ .
T Consensus 26 ~~~l~~~~v~I~G~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~~~~~i~~~ 105 (227)
T cd01076 26 GIGLAGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERITNEELLEL 105 (227)
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceecCCccceee
Confidence 456899999999999999999999999999988 7887 6544443322 22 2233444444 3
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccc
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIE 904 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid 904 (1027)
++||++.|+ ..++++.+....++ +.+| ++..+..+.
T Consensus 106 ~~Dvlip~a-~~~~i~~~~~~~l~--a~~I-~egAN~~~t 141 (227)
T cd01076 106 DCDILIPAA-LENQITADNADRIK--AKII-VEAANGPTT 141 (227)
T ss_pred cccEEEecC-ccCccCHHHHhhce--eeEE-EeCCCCCCC
Confidence 689999998 55679999999998 3333 355566665
No 286
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.51 E-value=0.00022 Score=76.14 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=69.6
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH--HhhcCcEEcC---HHHHhccCCEEEecCCCcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ--AAMEGFLVVT---MEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~--A~~~G~~v~~---~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
+.+.|++|+|+|.|.+|..-++.|...||+|+|++.++....+ +....+.+.. ..+.+..+|+||.|||.+. ++
T Consensus 5 l~l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~~-ln 83 (205)
T TIGR01470 5 ANLEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDEE-LN 83 (205)
T ss_pred EEcCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCHH-HH
Confidence 3578999999999999999999999999999999776543332 2222333321 2455778999999999875 57
Q ss_pred HHHHhcCCCCeEEEEecCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~ 899 (1027)
.......+..++++|+.--
T Consensus 84 ~~i~~~a~~~~ilvn~~d~ 102 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVDD 102 (205)
T ss_pred HHHHHHHHHcCCEEEECCC
Confidence 6666667778899997543
No 287
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.50 E-value=0.00022 Score=79.71 Aligned_cols=91 Identities=18% Similarity=0.203 Sum_probs=70.6
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE--EcCHHHHhccCCEEEecCCCcccCc--HHHHhcC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL--VVTMEYAKKYGDIFVTCTGNYHVIT--HDHMRDM 887 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~--v~~~~e~l~~aDvvi~atG~~~vi~--~~~~~~m 887 (1027)
+|+|+|+|.+|..+|..++..|.+|+++|+++.....+...|.. ..+..+++.++|+||.|+....+.. ++....+
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~l 81 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPAL 81 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHhC
Confidence 69999999999999999999999999999998877777777752 2223356789999999987543221 2334567
Q ss_pred CCCeEEEEecCCCcc
Q psy15208 888 KDQAIVCNIGHFDNE 902 (1027)
Q Consensus 888 k~gailvNvG~~d~e 902 (1027)
++++++.++|....+
T Consensus 82 ~~~~ii~d~~Svk~~ 96 (279)
T PRK07417 82 PPEAIVTDVGSVKAP 96 (279)
T ss_pred CCCcEEEeCcchHHH
Confidence 899999999987543
No 288
>KOG3847|consensus
Probab=97.48 E-value=0.00044 Score=76.24 Aligned_cols=122 Identities=14% Similarity=0.226 Sum_probs=80.8
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC-----C---------C-------CCcc--
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG-----T---------Y-------DSGN-- 87 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g-----~---------~-------~~~~-- 87 (1027)
...|+|||.||. +|+.. .|..+.-.||++||-|.+++.|.+..+.- . + ....
T Consensus 116 ~k~PvvvFSHGL---ggsRt--~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef 190 (399)
T KOG3847|consen 116 DKYPVVVFSHGL---GGSRT--LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEF 190 (399)
T ss_pred CCccEEEEeccc---ccchh--hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeE
Confidence 568999999997 34432 57788999999999999999987755431 0 0 0000
Q ss_pred --------chHHHHHHHHHHHHHh-----------------------CCCCcEEEEEechhHHHHHHHHHhcCCcCCccE
Q psy15208 88 --------GETDDMEILLRYIQKK-----------------------YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKI 136 (1027)
Q Consensus 88 --------~~~~Dv~avl~~L~~~-----------------------~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~g 136 (1027)
..+.....+++.+.+- ....++.++|||+||+.++...+.+.+ ++.
T Consensus 191 ~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~---Frc 267 (399)
T KOG3847|consen 191 HIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD---FRC 267 (399)
T ss_pred EeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc---eee
Confidence 0123333333333321 111358999999999999888877554 777
Q ss_pred EEEEccC---CCcCCCCCCCCcEEEEE
Q psy15208 137 LILISVA---VKKWLIPEVPKNTIIIH 160 (1027)
Q Consensus 137 LVli~p~---~~~~~l~~i~~PvLiIh 160 (1027)
.|+++.. .........+-|+++|.
T Consensus 268 aI~lD~WM~Pl~~~~~~~arqP~~fin 294 (399)
T KOG3847|consen 268 AIALDAWMFPLDQLQYSQARQPTLFIN 294 (399)
T ss_pred eeeeeeeecccchhhhhhccCCeEEEE
Confidence 7777753 22334677889999987
No 289
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.47 E-value=0.0043 Score=70.53 Aligned_cols=149 Identities=15% Similarity=0.110 Sum_probs=98.9
Q ss_pred EEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCC--CCCCCC----
Q psy15208 8 FNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRG--VGASSG---- 81 (1027)
Q Consensus 8 i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrG--hG~S~g---- 81 (1027)
..+...+.++ -.+|.|... ..+++.||++||++.+..+. .....+.+.|.++|+.++++.+|. ...++.
T Consensus 65 ~~L~~~~~~f-laL~~~~~~--~~~~G~vIilp~~g~~~d~p--~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~ 139 (310)
T PF12048_consen 65 QWLQAGEERF-LALWRPANS--AKPQGAVIILPDWGEHPDWP--GLIAPLRRELPDHGWATLSITLPDPAPPASPNRATE 139 (310)
T ss_pred EEeecCCEEE-EEEEecccC--CCCceEEEEecCCCCCCCcH--hHHHHHHHHhhhcCceEEEecCCCcccccCCccCCC
Confidence 3455433344 346666642 35788999999986544322 245678889999999999999987 111110
Q ss_pred ----------CC--CC-----------------ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcC
Q psy15208 82 ----------TY--DS-----------------GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEI 132 (1027)
Q Consensus 82 ----------~~--~~-----------------~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~ 132 (1027)
.. .. ...+..-+.++++++... +..+++|+||+.|+..++.+....+..
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~-~~~~ivlIg~G~gA~~~~~~la~~~~~- 217 (310)
T PF12048_consen 140 AEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ-GGKNIVLIGHGTGAGWAARYLAEKPPP- 217 (310)
T ss_pred CCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHhcCCCc-
Confidence 00 00 011233344555555444 555699999999999999999988753
Q ss_pred CccEEEEEccCCCcC--------CCCCCCCcEEEEEeCC
Q psy15208 133 SIKILILISVAVKKW--------LIPEVPKNTIIIHGEL 163 (1027)
Q Consensus 133 ~V~gLVli~p~~~~~--------~l~~i~~PvLiIhG~~ 163 (1027)
.++++|++++..+.. .+..+..|+|=|+...
T Consensus 218 ~~daLV~I~a~~p~~~~n~~l~~~la~l~iPvLDi~~~~ 256 (310)
T PF12048_consen 218 MPDALVLINAYWPQPDRNPALAEQLAQLKIPVLDIYSAD 256 (310)
T ss_pred ccCeEEEEeCCCCcchhhhhHHHHhhccCCCEEEEecCC
Confidence 489999999876643 2567889999888776
No 290
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.46 E-value=0.00036 Score=77.73 Aligned_cols=91 Identities=21% Similarity=0.203 Sum_probs=74.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchh-HHHHhhcCcEE-cCHHHHhccCCEEEecCCCcc----cCc--HH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPIC-ALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYH----VIT--HD 882 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r-~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~----vi~--~~ 882 (1027)
.+|.+||.|..|..+|++|...|-.|.|+|++|.+ ...+...|..+ .+..++++.+|+||++.++.. ++. ..
T Consensus 1 ~kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g 80 (286)
T COG2084 1 MKIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENG 80 (286)
T ss_pred CeEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccc
Confidence 37999999999999999999999999999999988 44465668874 467799999999999887653 332 23
Q ss_pred HHhcCCCCeEEEEecCCCc
Q psy15208 883 HMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~ 901 (1027)
.++.||+|+++|+.+.-+.
T Consensus 81 ~~~~~~~G~i~IDmSTisp 99 (286)
T COG2084 81 LLEGLKPGAIVIDMSTISP 99 (286)
T ss_pred hhhcCCCCCEEEECCCCCH
Confidence 4678999999999988643
No 291
>PRK10083 putative oxidoreductase; Provisional
Probab=97.45 E-value=0.00031 Score=79.68 Aligned_cols=92 Identities=15% Similarity=0.168 Sum_probs=72.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHh-CCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc----cCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRA-LSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEYAKK----YGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~-~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~----~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.+|+.+++.++. +|++ |++++.++.+...+...|++ +++ ..+.+. ..|++++++|.
T Consensus 159 ~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~~g~ 238 (339)
T PRK10083 159 TEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTLIIDAACH 238 (339)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCEEEECCCC
Confidence 579999999999999999999997 6995 77888888888888888875 332 223332 34799999986
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...+. +.++.++++|.++++|..+
T Consensus 239 ~~~~~-~~~~~l~~~G~~v~~g~~~ 262 (339)
T PRK10083 239 PSILE-EAVTLASPAARIVLMGFSS 262 (339)
T ss_pred HHHHH-HHHHHhhcCCEEEEEccCC
Confidence 65444 5589999999999999764
No 292
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.44 E-value=0.0019 Score=72.72 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=53.7
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC------CCCcEEEEEechhHHHHHHHHHh--
Q psy15208 56 TLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKY------PYLPIILAGFSFGTFVQAKLQKR-- 127 (1027)
Q Consensus 56 ~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~------~~~pviLVGhSmGG~vAl~~A~~-- 127 (1027)
.+...+.++||.|+++|+.|.|. .|.........+...++..++.. ...++.++|||.||.-++..+..
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~---~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~ 93 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGT---PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAP 93 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCC---cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhH
Confidence 35556667899999999999987 33222233333333333333211 23579999999999998776643
Q ss_pred -cCCcCC--ccEEEEEccC
Q psy15208 128 -LDKEIS--IKILILISVA 143 (1027)
Q Consensus 128 -~p~~~~--V~gLVli~p~ 143 (1027)
|..+.. +.|.++.+++
T Consensus 94 ~YApeL~~~l~Gaa~gg~~ 112 (290)
T PF03583_consen 94 SYAPELNRDLVGAAAGGPP 112 (290)
T ss_pred HhCcccccceeEEeccCCc
Confidence 222334 7788877764
No 293
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.43 E-value=0.00065 Score=76.95 Aligned_cols=99 Identities=20% Similarity=0.237 Sum_probs=76.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHh-h---cCcE--EcCHHHHhccCCEEEecCCCc-cc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAA-M---EGFL--VVTMEYAKKYGDIFVTCTGNY-HV 878 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~-~---~G~~--v~~~~e~l~~aDvvi~atG~~-~v 878 (1027)
...++++|+|+|..|+..++.+.. ++. +|.++++++.++.+.. . .++. +.+.++++.++|+|++||+++ .+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~~Pl 202 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSRTPV 202 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCCCce
Confidence 467999999999999999999865 676 7999999987765422 1 2344 347888999999999998765 45
Q ss_pred CcHHHHhcCCCCeEEEEecCC---Ccccchhhhhc
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLKK 910 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~---d~eid~~~l~~ 910 (1027)
+.. .+|+|+.+.++|.+ ..|+|.+.+..
T Consensus 203 ~~~----~~~~g~hi~~iGs~~p~~~El~~~~~~~ 233 (304)
T PRK07340 203 YPE----AARAGRLVVAVGAFTPDMAELAPRTVRG 233 (304)
T ss_pred eCc----cCCCCCEEEecCCCCCCcccCCHHHHhh
Confidence 553 37999999999986 36888775553
No 294
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.42 E-value=0.00065 Score=77.69 Aligned_cols=92 Identities=16% Similarity=0.205 Sum_probs=72.4
Q ss_pred CccccCCEEEEEcC-ChhHHHHHHHHHh-CCC-EEEEEcCCchhHHH-HhhcC-cEEcCHHHHhccCCEEEecCCCc-c-
Q psy15208 805 DVMIAGKIAVIIGY-GDVGKGSAQAMRA-LSA-QVWIIEIDPICALQ-AAMEG-FLVVTMEYAKKYGDIFVTCTGNY-H- 877 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~-G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~-A~~~G-~~v~~~~e~l~~aDvvi~atG~~-~- 877 (1027)
+..+.||+|+|+|+ |.||+.+++.+.. .|+ +++++++++.++.. +...+ .++.++++++.++|+|+.+|+.. .
T Consensus 150 g~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~~~~~ 229 (340)
T PRK14982 150 GIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASMPKGV 229 (340)
T ss_pred ccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcCCcCC
Confidence 44689999999999 8999999999975 575 89999988766654 22222 34567888999999999999864 3
Q ss_pred cCcHHHHhcCCCCeEEEEecCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+++.++ |+++.++++++..
T Consensus 230 ~I~~~~---l~~~~~viDiAvP 248 (340)
T PRK14982 230 EIDPET---LKKPCLMIDGGYP 248 (340)
T ss_pred cCCHHH---hCCCeEEEEecCC
Confidence 367664 5899999999987
No 295
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.41 E-value=0.00033 Score=78.58 Aligned_cols=90 Identities=14% Similarity=0.202 Sum_probs=66.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-------cC-----------------cE-EcCHHHHhcc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-------EG-----------------FL-VVTMEYAKKY 865 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-------~G-----------------~~-v~~~~e~l~~ 865 (1027)
++|+|+|.|.+|.++|..++..|.+|+++|+++.+...+.. .+ .. ..++++++.+
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVAD 81 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhcC
Confidence 57999999999999999999999999999999876554321 11 22 3457788899
Q ss_pred CCEEEecCCCcccCcHH----HHhcCCCCeEE-EEecCCC
Q psy15208 866 GDIFVTCTGNYHVITHD----HMRDMKDQAIV-CNIGHFD 900 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~----~~~~mk~gail-vNvG~~d 900 (1027)
+|+||+|.....-+... ..+.+++++++ +|++..+
T Consensus 82 aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~~ 121 (288)
T PRK09260 82 ADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTMS 121 (288)
T ss_pred CCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Confidence 99999998765322222 23557888877 6777753
No 296
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.39 E-value=0.00092 Score=78.71 Aligned_cols=91 Identities=18% Similarity=0.157 Sum_probs=69.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHH-HhhcC-cEEcC---HHHHhccCCEEEecCCCcc-cC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQ-AAMEG-FLVVT---MEYAKKYGDIFVTCTGNYH-VI 879 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~-A~~~G-~~v~~---~~e~l~~aDvvi~atG~~~-vi 879 (1027)
.+.|++|+|+|+|.+|+.+|..++..|+ +++++.+++.++.. +...+ ..+.+ +.+.+.++|+||+||+.++ ++
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~~vi 257 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLEYIV 257 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCCeeE
Confidence 4789999999999999999999999997 79999999877654 33333 34444 3456789999999998764 66
Q ss_pred cHHHHhcCCCCeEEEEecCC
Q psy15208 880 THDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~ 899 (1027)
+.+.+. ...-++++.+.+
T Consensus 258 ~~~~~~--~~~~~~iDLavP 275 (414)
T PRK13940 258 TCKYVG--DKPRVFIDISIP 275 (414)
T ss_pred CHHHhC--CCCeEEEEeCCC
Confidence 766542 233577888776
No 297
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.39 E-value=0.00056 Score=91.57 Aligned_cols=101 Identities=18% Similarity=0.155 Sum_probs=73.3
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
.+.++++||++ |+. ..|..+++.|.. ++.|+.+|+||++.+.....+...+++++.+.++. ..+..|++++
T Consensus 1068 ~~~l~~lh~~~---g~~--~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~---~~~~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPAS---GFA--WQFSVLSRYLDP-QWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLE---QQPHGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCC---Cch--HHHHHHHHhcCC-CCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHh---hCCCCCEEEE
Confidence 35689999973 332 368889998865 79999999999987654333445555555444443 3344589999
Q ss_pred EechhHHHHHHHHHhc---CCcCCccEEEEEccCC
Q psy15208 113 GFSFGTFVQAKLQKRL---DKEISIKILILISVAV 144 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~---p~~~~V~gLVli~p~~ 144 (1027)
||||||.+|+.+|.+. ++ ++..++++++..
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~--~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGE--EVAFLGLLDTWP 1171 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCC--ceeEEEEecCCC
Confidence 9999999999999864 44 688888888643
No 298
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.38 E-value=0.00067 Score=81.74 Aligned_cols=128 Identities=20% Similarity=0.108 Sum_probs=79.3
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCC----CCCCCCCCCCC-ccchH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFR----GVGASSGTYDS-GNGET 90 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dlr----GhG~S~g~~~~-~~~~~ 90 (1027)
-++.-+|.|.........|++|++||++...|+.....+ .-...++.+++-|+.++|| |+=.+...... ...-+
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~-~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 186 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPY-DGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGL 186 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGG-HTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHH
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccc-cccccccCCCEEEEEecccccccccccccccccCchhhhh
Confidence 467778889874322257999999998776666521122 2334456779999999997 22212111111 23357
Q ss_pred HHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 91 DDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 91 ~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.|...+++|+++. ++.+ +|.|+|||.||..+...+.....+..++++|+.++..
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 8999999999974 4544 4999999999999877776633244789999998743
No 299
>PLN02256 arogenate dehydrogenase
Probab=97.36 E-value=0.00069 Score=76.68 Aligned_cols=91 Identities=15% Similarity=0.153 Sum_probs=69.3
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHh-ccCCEEEecCCCcc---cCcHHH
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAK-KYGDIFVTCTGNYH---VITHDH 883 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l-~~aDvvi~atG~~~---vi~~~~ 883 (1027)
.+++|+|+|+|.+|..+|+.++..|.+|++++.++. ...+...|+.. .+.++++ ..+|+||.|+.... ++..-.
T Consensus 35 ~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~-~~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~~~vl~~l~ 113 (304)
T PLN02256 35 RKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDY-SDIAAELGVSFFRDPDDFCEEHPDVVLLCTSILSTEAVLRSLP 113 (304)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccH-HHHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHHHHHHHhhh
Confidence 678999999999999999999999999999998874 34456677754 3566665 46999999987542 222211
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
...+++++++++++...
T Consensus 114 ~~~l~~~~iviDv~SvK 130 (304)
T PLN02256 114 LQRLKRSTLFVDVLSVK 130 (304)
T ss_pred hhccCCCCEEEecCCch
Confidence 34478999999999964
No 300
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.35 E-value=0.0011 Score=75.87 Aligned_cols=98 Identities=22% Similarity=0.210 Sum_probs=74.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHH-hCCC-EEEEEcCCchhHHHHh-----hcCcE---EcCHHHHhccCCEEEecCCCccc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMR-ALSA-QVWIIEIDPICALQAA-----MEGFL---VVTMEYAKKYGDIFVTCTGNYHV 878 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~-~~Ga-~ViV~d~dp~r~~~A~-----~~G~~---v~~~~e~l~~aDvvi~atG~~~v 878 (1027)
..++++|+|+|.+|+..+..+. ..++ +|.++++++.++.... ..+.+ +.+.++++.++|+|++||++.+-
T Consensus 126 ~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p 205 (325)
T PRK08618 126 DAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTP 205 (325)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCc
Confidence 5789999999999998887664 5677 7999999987765422 22543 34578889999999999987653
Q ss_pred CcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
+= . +.+|+|+.++.+|.+ ..|++.+.+.
T Consensus 206 ~i--~-~~l~~G~hV~~iGs~~p~~~E~~~~~~~ 236 (325)
T PRK08618 206 VF--S-EKLKKGVHINAVGSFMPDMQELPSEAIA 236 (325)
T ss_pred ch--H-HhcCCCcEEEecCCCCcccccCCHHHHh
Confidence 22 2 568999999999997 3577765444
No 301
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.35 E-value=0.00057 Score=72.89 Aligned_cols=92 Identities=16% Similarity=0.153 Sum_probs=64.1
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcC-cEEcC---HHHHhccCCEEEecCCCcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEG-FLVVT---MEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G-~~v~~---~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
+.+.||+|+|+|.|.+|...++.|...|++|+|++.+...... ....| +.... .++.+..+|+||.||++.. ++
T Consensus 6 l~l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~e-lN 84 (202)
T PRK06718 6 IDLSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPR-VN 84 (202)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHH-HH
Confidence 4589999999999999999999999999999999765533322 22222 22221 2345678999999998875 56
Q ss_pred HHHHhcCCCCeEEEEecCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~ 899 (1027)
.......+. .+++|+.-.
T Consensus 85 ~~i~~~a~~-~~lvn~~d~ 102 (202)
T PRK06718 85 EQVKEDLPE-NALFNVITD 102 (202)
T ss_pred HHHHHHHHh-CCcEEECCC
Confidence 554333444 467888543
No 302
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.34 E-value=0.001 Score=73.32 Aligned_cols=103 Identities=20% Similarity=0.283 Sum_probs=75.0
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAG 113 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVG 113 (1027)
|+++++|+. +|. -..|..++.+|... ..|+.++.||.+.-.....+.+.+ +...++.++..-|..|+.|.|
T Consensus 1 ~pLF~fhp~---~G~--~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~~~l~~~---a~~yv~~Ir~~QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPA---GGS--VLAYAPLAAALGPL-LPVYGLQAPGYGAGEQPFASLDDM---AAAYVAAIRRVQPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCC---CCc--HHHHHHHHHHhccC-ceeeccccCcccccccccCCHHHH---HHHHHHHHHHhCCCCCEEEEe
Confidence 467999995 232 23578899999875 999999999998644333343333 445666666666777999999
Q ss_pred echhHHHHHHHHHhcCC-cCCccEEEEEccCCC
Q psy15208 114 FSFGTFVQAKLQKRLDK-EISIKILILISVAVK 145 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~~ 145 (1027)
||+||.+|+.+|.+.-. ...|..++++++..+
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999999987533 125888888887663
No 303
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=97.34 E-value=0.0005 Score=79.02 Aligned_cols=92 Identities=17% Similarity=0.228 Sum_probs=72.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH--------HHh------ccCCEEEe
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME--------YAK------KYGDIFVT 871 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~--------e~l------~~aDvvi~ 871 (1027)
..|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|++ +.+.. +.+ ...|++++
T Consensus 176 ~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid 255 (361)
T cd08231 176 GAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIE 255 (361)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEE
Confidence 489999999999999999999999999 999998888887777777874 22211 111 24799999
Q ss_pred cCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 872 CTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 872 atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
++|....+. ..++.|++++.++.+|..+
T Consensus 256 ~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 283 (361)
T cd08231 256 ASGHPAAVP-EGLELLRRGGTYVLVGSVA 283 (361)
T ss_pred CCCChHHHH-HHHHHhccCCEEEEEcCCC
Confidence 998755444 5589999999999999753
No 304
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.33 E-value=0.00068 Score=76.51 Aligned_cols=87 Identities=18% Similarity=0.129 Sum_probs=70.8
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhcc---CCEEEecCCCc----ccCcHHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKY---GDIFVTCTGNY----HVITHDH 883 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~---aDvvi~atG~~----~vi~~~~ 883 (1027)
+|+|||.|.+|..+|+.+...|.+|+++|+++.+...+...|.... +.++++.+ +|+|+.++.+. .++ .+.
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~-~~i 80 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVI-KDL 80 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHH-HHH
Confidence 6999999999999999999999999999999988777777787754 67777765 69999988765 233 244
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
+..+++|.++++++..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (299)
T PRK12490 81 YPLLSPGDIVVDGGNS 96 (299)
T ss_pred hccCCCCCEEEECCCC
Confidence 5668999999999765
No 305
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.33 E-value=0.00075 Score=77.20 Aligned_cols=102 Identities=16% Similarity=0.161 Sum_probs=75.7
Q ss_pred HHHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc----
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK---- 864 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~---- 864 (1027)
.|..+.+... .-.|++|+|.| .|.||....+.++++|++|+++-..+.+...+...|.+ +++ +.+.+.
T Consensus 130 A~~~l~~~~~-l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~ 208 (326)
T COG0604 130 AWLALFDRAG-LKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTG 208 (326)
T ss_pred HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcC
Confidence 4455554223 34599999999 88899999999999997766665555555588889985 444 333332
Q ss_pred --cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 865 --YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 865 --~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..|+|+++.|... +.+ .++.|++++.++.+|...
T Consensus 209 g~gvDvv~D~vG~~~-~~~-~l~~l~~~G~lv~ig~~~ 244 (326)
T COG0604 209 GKGVDVVLDTVGGDT-FAA-SLAALAPGGRLVSIGALS 244 (326)
T ss_pred CCCceEEEECCCHHH-HHH-HHHHhccCCEEEEEecCC
Confidence 4799999998774 443 589999999999999864
No 306
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.32 E-value=0.00089 Score=76.25 Aligned_cols=88 Identities=20% Similarity=0.181 Sum_probs=64.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----------cC---------cE-EcCHHHHhccCCEE
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----------EG---------FL-VVTMEYAKKYGDIF 869 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----------~G---------~~-v~~~~e~l~~aDvv 869 (1027)
++|+|+|.|.+|.++|..+...|.+|+++|++|.....+.. .| +. ..++++++.+||+|
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDlV 87 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADFI 87 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCEE
Confidence 68999999999999999999999999999999864332111 11 12 34677888999999
Q ss_pred EecCCCc----ccCcHHHHhcCCCCeEEEEecC
Q psy15208 870 VTCTGNY----HVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 870 i~atG~~----~vi~~~~~~~mk~gailvNvG~ 898 (1027)
++|.... ..+-.+.-+.++++++|....+
T Consensus 88 iEavpE~l~vK~~lf~~l~~~~~~~aIlaSnTS 120 (321)
T PRK07066 88 QESAPEREALKLELHERISRAAKPDAIIASSTS 120 (321)
T ss_pred EECCcCCHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 9987543 2222343466899997765444
No 307
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=97.31 E-value=0.00068 Score=76.24 Aligned_cols=89 Identities=22% Similarity=0.319 Sum_probs=64.4
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-----------hhcC-------------cEEcCHHHHhccC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-----------AMEG-------------FLVVTMEYAKKYG 866 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-----------~~~G-------------~~v~~~~e~l~~a 866 (1027)
++|+|+|.|.+|.++|..+...|.+|+++|+++.+...+ ...| ..+.+..++++.|
T Consensus 5 ~~V~vIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a 84 (295)
T PLN02545 5 KKVGVVGAGQMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRDA 84 (295)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCCC
Confidence 689999999999999999999999999999998665421 1112 2233334678899
Q ss_pred CEEEecCCCc----ccCcHHHHhcCCCCeEEE-EecCC
Q psy15208 867 DIFVTCTGNY----HVITHDHMRDMKDQAIVC-NIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~----~vi~~~~~~~mk~gailv-NvG~~ 899 (1027)
|+||+|.... ..+-.+..+.++++++++ |++..
T Consensus 85 D~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~i 122 (295)
T PLN02545 85 DFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSI 122 (295)
T ss_pred CEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 9999997633 222223335688999886 77765
No 308
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.31 E-value=0.0014 Score=69.19 Aligned_cols=95 Identities=22% Similarity=0.157 Sum_probs=65.4
Q ss_pred CccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----cCcE--E---cC---HHHHhccCCEEE
Q psy15208 805 DVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----EGFL--V---VT---MEYAKKYGDIFV 870 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----~G~~--v---~~---~~e~l~~aDvvi 870 (1027)
+..+.+++++|+|. |.+|+.+++.+...|++|+++.+++.++..... .+.. . .+ +.+++.++|+||
T Consensus 23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi 102 (194)
T cd01078 23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVF 102 (194)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence 55689999999996 999999999999999999999888765543221 1222 1 12 236678899999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
++|+.........-...+++.+++++...
T Consensus 103 ~at~~g~~~~~~~~~~~~~~~vv~D~~~~ 131 (194)
T cd01078 103 AAGAAGVELLEKLAWAPKPLAVAADVNAV 131 (194)
T ss_pred ECCCCCceechhhhcccCceeEEEEccCC
Confidence 98865542111111234557788887665
No 309
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=97.31 E-value=0.00048 Score=77.47 Aligned_cols=92 Identities=17% Similarity=0.154 Sum_probs=72.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHh--ccCCEEEecCCCcccCcHHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAK--KYGDIFVTCTGNYHVITHDH 883 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l--~~aDvvi~atG~~~vi~~~~ 883 (1027)
...|++|+|.|.|.+|+.+++.++.+|++|+++..++.+...+...|+.. .+..+.. ...|++++++|....+. ..
T Consensus 153 ~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vid~~g~~~~~~-~~ 231 (319)
T cd08242 153 ITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAESEGGGFDVVVEATGSPSGLE-LA 231 (319)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCccccccCCCCCEEEECCCChHHHH-HH
Confidence 35799999999999999999999999999999988888887777788753 2222222 34899999998754343 44
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
++.+++++.++..|..
T Consensus 232 ~~~l~~~g~~v~~~~~ 247 (319)
T cd08242 232 LRLVRPRGTVVLKSTY 247 (319)
T ss_pred HHHhhcCCEEEEEccc
Confidence 7889999999987654
No 310
>KOG2112|consensus
Probab=97.31 E-value=0.0014 Score=69.08 Aligned_cols=137 Identities=15% Similarity=0.095 Sum_probs=83.4
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC--------CCC-----CCccc-------hHHH
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS--------GTY-----DSGNG-------ETDD 92 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~--------g~~-----~~~~~-------~~~D 92 (1027)
+.+|||+||.+..+.+ |..+.+.|.-....-++|-.|-.-.+. +.. .+... .+..
T Consensus 3 ~atIi~LHglGDsg~~-----~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~ 77 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSG-----WAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADN 77 (206)
T ss_pred eEEEEEEecCCCCCcc-----HHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHH
Confidence 4579999998764332 455555565567777777554322211 100 01111 1122
Q ss_pred HHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-------cCCCCCCCCcEEEEEeCCC
Q psy15208 93 MEILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-------KWLIPEVPKNTIIIHGELD 164 (1027)
Q Consensus 93 v~avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-------~~~l~~i~~PvLiIhG~~D 164 (1027)
+..++++.... -+..++++-|+||||.+++..+..+|. .+.+.+..++..+ .|....-..|++..||+.|
T Consensus 78 i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~--~l~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~~d 155 (206)
T KOG2112|consen 78 IANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPK--ALGGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGTAD 155 (206)
T ss_pred HHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhcccc--ccceeeccccccccchhhccCCccccCcchhheecccCC
Confidence 22222222221 133468999999999999999999976 6777777776543 2222222688999999999
Q ss_pred CCCChHHHHhhh
Q psy15208 165 EIIPLKDVFLWA 176 (1027)
Q Consensus 165 ~iVP~~~~~~l~ 176 (1027)
++||........
T Consensus 156 ~~vp~~~g~~s~ 167 (206)
T KOG2112|consen 156 PLVPFRFGEKSA 167 (206)
T ss_pred ceeehHHHHHHH
Confidence 999998766443
No 311
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=97.29 E-value=0.00041 Score=78.84 Aligned_cols=92 Identities=14% Similarity=0.117 Sum_probs=73.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh---ccCCEEEecCCCccc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK---KYGDIFVTCTGNYHV 878 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l---~~aDvvi~atG~~~v 878 (1027)
..|++|+|.|.|.+|+.+++.++.+|++|++++.++.+...+...|.+ +.+ ..+.+ ...|++++++|....
T Consensus 162 ~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~vi~~~g~~~~ 241 (333)
T cd08296 162 KPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLILATAPNAKA 241 (333)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEEEECCCchHH
Confidence 578999999999999999999999999999999888787777777864 222 11222 347999999876554
Q ss_pred CcHHHHhcCCCCeEEEEecCCC
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d 900 (1027)
+. ..++.+++++.++++|...
T Consensus 242 ~~-~~~~~l~~~G~~v~~g~~~ 262 (333)
T cd08296 242 IS-ALVGGLAPRGKLLILGAAG 262 (333)
T ss_pred HH-HHHHHcccCCEEEEEecCC
Confidence 44 4588999999999999764
No 312
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.27 E-value=0.004 Score=74.61 Aligned_cols=134 Identities=16% Similarity=0.095 Sum_probs=80.9
Q ss_pred EEEEEec--CCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH------------HH---HHHHhCCcEE
Q psy15208 6 KFFNING--SVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT------------LV---RVMLSLGYIS 68 (1027)
Q Consensus 6 ~~i~I~t--~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~------------la---~~La~~Gy~V 68 (1027)
..+.+.. .+..+..+++.+... ....|++|+++|++.-++ +. ..+.. +. -.+.+ -..+
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~--~~~~Pl~lwlnGGPG~ss-~~-G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~ 124 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNG--NPEAPVLLWMTGGPGCSS-MF-ALLAENGPCLMNETTGDIYNNTYSWNN-EAYV 124 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCC--CCCCCEEEEECCCCcHHH-HH-hhhccCCCeEEeCCCCceeECCccccc-ccCe
Confidence 3455543 234677777776542 246899999999763221 10 00000 00 00111 3578
Q ss_pred EEEcCC-CCCCCCCCC----CCccchHHHHHHHHHHHHHhCCC---CcEEEEEechhHHHHHHHHHhcCC--------cC
Q psy15208 69 IRMNFR-GVGASSGTY----DSGNGETDDMEILLRYIQKKYPY---LPIILAGFSFGTFVQAKLQKRLDK--------EI 132 (1027)
Q Consensus 69 la~Dlr-GhG~S~g~~----~~~~~~~~Dv~avl~~L~~~~~~---~pviLVGhSmGG~vAl~~A~~~p~--------~~ 132 (1027)
+.+|+| |+|.|.... .+....+.|+..+++.+..++|. .+++|+|||+||..+..+|.+.-+ ..
T Consensus 125 l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~i 204 (462)
T PTZ00472 125 IYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYI 204 (462)
T ss_pred EEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCcee
Confidence 889975 888886432 12345788888888877666654 789999999999998888776421 12
Q ss_pred CccEEEEEccCC
Q psy15208 133 SIKILILISVAV 144 (1027)
Q Consensus 133 ~V~gLVli~p~~ 144 (1027)
.++|+++..+..
T Consensus 205 nLkGi~IGNg~~ 216 (462)
T PTZ00472 205 NLAGLAVGNGLT 216 (462)
T ss_pred eeEEEEEecccc
Confidence 355666555443
No 313
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=97.27 E-value=0.00089 Score=73.57 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=66.4
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEE-EEcC----------CchhH-----HHH--------hhc---CcEEc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVW-IIEI----------DPICA-----LQA--------AME---GFLVV 857 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~Vi-V~d~----------dp~r~-----~~A--------~~~---G~~v~ 857 (1027)
+..+.|++|+|.|+|.+|+.+|+.+..+|++|+ |.|. |+... ... ... +.+..
T Consensus 33 ~~~l~g~~vaIqGfGnVG~~~a~~L~e~GakvvaVsD~~G~i~~~~Gld~~~l~~l~~~~~~~~~~v~~~~~~~~~a~~~ 112 (254)
T cd05313 33 NETLKGKRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKYF 112 (254)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHhhcCCCCEEe
Confidence 557899999999999999999999999999988 6661 11111 000 011 24455
Q ss_pred CHHHHhc-cCCEEEecCCCcccCcHHHHhcCC-CCeEEEEecCCCcccchh
Q psy15208 858 TMEYAKK-YGDIFVTCTGNYHVITHDHMRDMK-DQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 858 ~~~e~l~-~aDvvi~atG~~~vi~~~~~~~mk-~gailvNvG~~d~eid~~ 906 (1027)
+.++.+. .|||++-|. ..++|+.+..+.++ +++.+|- +..+..+..+
T Consensus 113 ~~~~~~~~~~DIliPcA-l~~~I~~~na~~i~~~~ak~I~-EgAN~p~t~~ 161 (254)
T cd05313 113 EGKKPWEVPCDIAFPCA-TQNEVDAEDAKLLVKNGCKYVA-EGANMPCTAE 161 (254)
T ss_pred CCcchhcCCCcEEEecc-ccccCCHHHHHHHHHcCCEEEE-eCCCCCCCHH
Confidence 5555553 699999875 45679998888884 3555543 3334444433
No 314
>PRK14031 glutamate dehydrogenase; Provisional
Probab=97.26 E-value=0.0012 Score=77.97 Aligned_cols=104 Identities=19% Similarity=0.218 Sum_probs=71.8
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEE-Ec----------CCchhHH---H------------HhhcCcEEcC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWI-IE----------IDPICAL---Q------------AAMEGFLVVT 858 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV-~d----------~dp~r~~---~------------A~~~G~~v~~ 858 (1027)
+..+.|++|+|.|+|++|...|+.|..+||+|++ .| +|+.... + +...|.+..+
T Consensus 223 g~~l~g~rVaVQGfGNVG~~aA~~L~e~GAkVVaVSD~~G~iy~~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~ga~~i~ 302 (444)
T PRK14031 223 GTDLKGKVCLVSGSGNVAQYTAEKVLELGGKVVTMSDSDGYIYDPDGIDREKLDYIMELKNLYRGRIREYAEKYGCKYVE 302 (444)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHHHhhcCCchhhhHhhcCCEEcC
Confidence 6679999999999999999999999999999886 67 5553221 0 1112455555
Q ss_pred HHHHh-ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 859 MEYAK-KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 859 ~~e~l-~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.++.+ ..|||++-|. ..+.|+.+..+.++..++.+-++..+.....+...
T Consensus 303 ~d~~~~~~cDIliPaA-l~n~I~~~na~~l~a~g~~~V~EgAN~P~t~eA~~ 353 (444)
T PRK14031 303 GARPWGEKGDIALPSA-TQNELNGDDARQLVANGVIAVSEGANMPSTPEAIK 353 (444)
T ss_pred CcccccCCCcEEeecc-cccccCHHHHHHHHhcCCeEEECCCCCCCCHHHHH
Confidence 55554 3699999876 45679999999987654434444444444444333
No 315
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.25 E-value=0.0011 Score=74.56 Aligned_cols=90 Identities=18% Similarity=0.164 Sum_probs=64.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----------cC-------------cEEcCHHHHhccC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----------EG-------------FLVVTMEYAKKYG 866 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----------~G-------------~~v~~~~e~l~~a 866 (1027)
++|+|+|.|.+|.++|..+...|.+|+++|+++.+...+.. .| ....+-.+.+.++
T Consensus 5 ~kI~vIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 84 (292)
T PRK07530 5 KKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDLEDLADC 84 (292)
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCHHHhcCC
Confidence 68999999999999999999999999999999866544321 23 2322222457899
Q ss_pred CEEEecCCCcc----cCcHHHHhcCCCCeEEE-EecCCC
Q psy15208 867 DIFVTCTGNYH----VITHDHMRDMKDQAIVC-NIGHFD 900 (1027)
Q Consensus 867 Dvvi~atG~~~----vi~~~~~~~mk~gailv-NvG~~d 900 (1027)
|+||+|..... .+-.+..+.++++++++ |++..+
T Consensus 85 D~Vieavpe~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 123 (292)
T PRK07530 85 DLVIEAATEDETVKRKIFAQLCPVLKPEAILATNTSSIS 123 (292)
T ss_pred CEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Confidence 99999987542 12223345678999887 666653
No 316
>PRK12861 malic enzyme; Reviewed
Probab=97.25 E-value=0.0019 Score=80.53 Aligned_cols=127 Identities=16% Similarity=0.224 Sum_probs=99.2
Q ss_pred CCccceEeecccccccccccchhhhhhHHHHHh---hhcCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEc--
Q psy15208 769 KLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK---RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIE-- 840 (1027)
Q Consensus 769 ~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~---r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d-- 840 (1027)
.|.+||| .|..+||+--...++. +.++..+...+|++.|+|.-|.++|+.+...|+ +++++|
T Consensus 155 ~~~ipvf----------~DD~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaAg~~ia~~l~~~G~~~~~i~~~D~~ 224 (764)
T PRK12861 155 RMKIPVF----------HDDQHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAAALACLDLLVDLGLPVENIWVTDIE 224 (764)
T ss_pred cCCCCee----------ccccchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHHHHHHHHHHHHcCCChhhEEEEcCC
Confidence 5778887 4677899887666654 455777889999999999999999999999999 799888
Q ss_pred ----------CCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 841 ----------IDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 841 ----------~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
.++.+...|... ...++.|+++.+|++|-+++ +++++++.++.|.+..++.-..-...|+..+..
T Consensus 225 Gli~~~r~~~l~~~k~~~a~~~--~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLsNPtpE~~pe~a 299 (764)
T PRK12861 225 GVVYRGRTTLMDPDKERFAQET--DARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALANPTPEIFPELA 299 (764)
T ss_pred CeeeCCCcccCCHHHHHHHhhc--CCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECCCCCccCCHHHH
Confidence 234444455543 23589999999999998886 789999999999988887766655556665533
No 317
>KOG3975|consensus
Probab=97.24 E-value=0.018 Score=62.31 Aligned_cols=108 Identities=14% Similarity=0.164 Sum_probs=77.2
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC---cEEEEEcCCCCCCCCC---CC-----CCccchHHHHHHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG---YISIRMNFRGVGASSG---TY-----DSGNGETDDMEILLRY 99 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G---y~Vla~DlrGhG~S~g---~~-----~~~~~~~~Dv~avl~~ 99 (1027)
..++.++++.|.+...| .|..+++.|...- +.++.+-.-||-.-+. .. ...-++.++++.-+++
T Consensus 27 ~~~~li~~IpGNPG~~g-----FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaF 101 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-----FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAF 101 (301)
T ss_pred CCceEEEEecCCCCchh-----HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHH
Confidence 56889999999764333 5677777776542 4599999889877551 11 1223567777888888
Q ss_pred HHHhCCC-CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 100 IQKKYPY-LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 100 L~~~~~~-~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+++..|. .+++++|||.|+++.+.+.-.......+..++++-|.
T Consensus 102 ik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 102 IKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred HHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 8886654 4699999999999999998755444467777777763
No 318
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=97.23 E-value=0.0009 Score=77.93 Aligned_cols=95 Identities=20% Similarity=0.159 Sum_probs=72.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH--------H----Hh--ccCCEEE
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME--------Y----AK--KYGDIFV 870 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~--------e----~l--~~aDvvi 870 (1027)
...|.+|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|.+ +++.. + .. ...|+|+
T Consensus 201 ~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvl 280 (384)
T cd08265 201 FRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQV 280 (384)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEE
Confidence 3579999999999999999999999999 799998888777777777763 22211 1 11 1479999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
+++|.....-.+.++.++++|+++++|..+.
T Consensus 281 d~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~ 311 (384)
T cd08265 281 EAAGAPPATIPQMEKSIAINGKIVYIGRAAT 311 (384)
T ss_pred ECCCCcHHHHHHHHHHHHcCCEEEEECCCCC
Confidence 9998642223355888999999999997643
No 319
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.22 E-value=0.0011 Score=74.82 Aligned_cols=88 Identities=17% Similarity=0.074 Sum_probs=70.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhcc---CCEEEecCCCc----ccCcHHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKY---GDIFVTCTGNY----HVITHDH 883 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~---aDvvi~atG~~----~vi~~~~ 883 (1027)
+|+|+|.|.+|..+|+.+...|.+|+++|+++.+...+...|..+. +.++.+.. +|+|+.+..+. .++ ...
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~-~~l 80 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATI-DEL 80 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHH-HHH
Confidence 6999999999999999999999999999999988777777888755 57777664 69999887654 223 234
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
+..+++|.++++.+...
T Consensus 81 ~~~l~~g~ivid~st~~ 97 (301)
T PRK09599 81 APLLSPGDIVIDGGNSY 97 (301)
T ss_pred HhhCCCCCEEEeCCCCC
Confidence 56789999999997653
No 320
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=97.22 E-value=0.002 Score=73.75 Aligned_cols=98 Identities=20% Similarity=0.160 Sum_probs=74.7
Q ss_pred cCCEEEEEcCChhHHHHHHHHH-hCCC-EEEEEcCCchhHHHH-hh----cCcEE---cCHHHHhccCCEEEecCCCc-c
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMR-ALSA-QVWIIEIDPICALQA-AM----EGFLV---VTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~-~~Ga-~ViV~d~dp~r~~~A-~~----~G~~v---~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
..++++|+|+|..|+..++.+. ..+. +|.|+++++.++... .. .|+++ .++++++.++|+|++||+.. .
T Consensus 128 ~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p 207 (326)
T TIGR02992 128 DSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETP 207 (326)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 5689999999999999999987 4775 799999998776542 21 25543 35788899999999999754 4
Q ss_pred cCcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
++..+ .+|+|..+..+|.. ..|+|.+.+.
T Consensus 208 ~i~~~---~l~~g~~i~~vg~~~p~~rEld~~~l~ 239 (326)
T TIGR02992 208 ILHAE---WLEPGQHVTAMGSDAEHKNEIDPAVIA 239 (326)
T ss_pred EecHH---HcCCCcEEEeeCCCCCCceecCHHHHh
Confidence 56654 47999999999975 3577766544
No 321
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.21 E-value=0.0011 Score=71.12 Aligned_cols=80 Identities=20% Similarity=0.282 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---------------------
Q psy15208 91 DDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--------------------- 147 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--------------------- 147 (1027)
+-.+.+++||.++.. .++|.|+|.|.||-+|+.+|..+|+ |+++|+++|+.-.|
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~---i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~ 80 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ---ISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDIS 80 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS---EEEEEEES--SB--SSEEEETTE--EE----B-GG
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC---ccEEEEeCCceeEecchhcccCCCccCCcCCcChh
Confidence 446778899988633 2479999999999999999999986 99999998742100
Q ss_pred -----------------------------CCCCCCCcEEEEEeCCCCCCChHHHH
Q psy15208 148 -----------------------------LIPEVPKNTIIIHGELDEIIPLKDVF 173 (1027)
Q Consensus 148 -----------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~ 173 (1027)
.+.++++|+|++.|++|.+.|-....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a 135 (213)
T PF08840_consen 81 KFSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMA 135 (213)
T ss_dssp G-EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHH
T ss_pred hceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHH
Confidence 14467899999999999999987644
No 322
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=97.21 E-value=0.087 Score=59.73 Aligned_cols=131 Identities=17% Similarity=0.182 Sum_probs=87.6
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC---hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG---DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
..+||||.=+...-|. -|.+.|. +.+..+ .+.|.+|+++|-| ++.+..+..++.+|++|.++-+...
T Consensus 116 s~vPVINa~~g~~~HP-------tQ~LaDl~Ti~e~~g-~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~ 187 (301)
T TIGR00670 116 SEVPVINAGDGSNQHP-------TQTLLDLYTIYEEFG-RLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEEL 187 (301)
T ss_pred CCCCEEeCCCCCCCCc-------HHHHHHHHHHHHHhC-CCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccc
Confidence 5789998754322221 2444332 222234 4789999999996 7999999999999999999843221
Q ss_pred ----h-HHHHhhcCcE---EcCHHHHhccCCEEEecCC------C---------cccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 845 ----C-ALQAAMEGFL---VVTMEYAKKYGDIFVTCTG------N---------YHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 845 ----r-~~~A~~~G~~---v~~~~e~l~~aDvvi~atG------~---------~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
. ...+...|.. ..+++++++.+|||.+..- . .--++.+.++.+|+++++...+.-..
T Consensus 188 ~~~~~~~~~~~~~G~~v~~~~d~~~a~~~aDvvyt~~~~~er~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mHclPRg~ 267 (301)
T TIGR00670 188 RMPKEILEELKAKGIKVRETESLEEVIDEADVLYVTRIQKERFPDPEEYEKYKGSYGITLERLEAAKKGVIIMHPLPRVD 267 (301)
T ss_pred cCCHHHHHHHHHcCCEEEEECCHHHHhCCCCEEEECCccccccCCHHHHHHHhcCCeECHHHHhhcCCCCEEECCCCCCc
Confidence 1 1234445655 3578999999999987431 1 12456677788888888887777556
Q ss_pred ccchhhh
Q psy15208 902 EIEVEKL 908 (1027)
Q Consensus 902 eid~~~l 908 (1027)
||+-+.+
T Consensus 268 Ev~~~V~ 274 (301)
T TIGR00670 268 EIDPSVD 274 (301)
T ss_pred ccCHHHh
Confidence 6665533
No 323
>PRK12862 malic enzyme; Reviewed
Probab=97.20 E-value=0.0026 Score=79.99 Aligned_cols=129 Identities=17% Similarity=0.258 Sum_probs=100.6
Q ss_pred CCccceEeecccccccccccchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEcC-
Q psy15208 769 KLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIEI- 841 (1027)
Q Consensus 769 ~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~- 841 (1027)
.|.+||| .|..+||+--...++.. .++..+...++++.|+|.-|.++|+.+...|+ +++++|.
T Consensus 159 ~~~ip~f----------~DD~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~ 228 (763)
T PRK12862 159 RMKIPVF----------HDDQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAAALACLDLLVSLGVKRENIWVTDIK 228 (763)
T ss_pred cCCCceE----------ecCcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHHHHHHHHHHHHcCCCcccEEEEcCC
Confidence 5778888 46678998876666544 45777889999999999999999999999999 7998883
Q ss_pred -----------CchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc
Q psy15208 842 -----------DPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK 910 (1027)
Q Consensus 842 -----------dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~ 910 (1027)
++.+...|... ...++.|+++.+|++|-+++ +++++++.++.|.+..++.-..-...|+..+....
T Consensus 229 G~i~~~r~~~l~~~~~~~a~~~--~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifalsNP~~E~~p~~a~~ 305 (763)
T PRK12862 229 GVVYEGRTELMDPWKARYAQKT--DARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALANPTPEILPEEARA 305 (763)
T ss_pred CeeeCCCCccccHHHHHHhhhc--ccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCCCCcccCCHHHHHH
Confidence 23344445543 34589999999999999887 78999999999998888876666656776654443
No 324
>KOG2931|consensus
Probab=97.20 E-value=0.0023 Score=70.55 Aligned_cols=128 Identities=15% Similarity=0.177 Sum_probs=93.3
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCC-CChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC---
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGT-MDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG--- 81 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs-~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g--- 81 (1027)
++..|.+..|.+++.++...+ +.+|+++=.|..+-..-+ +.......-+..+..+ |.++-+|.|||-.-..
T Consensus 23 ~e~~V~T~~G~v~V~V~Gd~~----~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p 97 (326)
T KOG2931|consen 23 QEHDVETAHGVVHVTVYGDPK----GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFP 97 (326)
T ss_pred eeeeeccccccEEEEEecCCC----CCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCC
Confidence 456788899999999887554 367889999987533221 1111111235556665 9999999999966432
Q ss_pred ---CCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 82 ---TYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 82 ---~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.+++.+++++++..+++++.-. .++=+|--.|+.+-.++|..+|+ +|-|+|++.+..
T Consensus 98 ~~y~yPsmd~LAd~l~~VL~~f~lk----~vIg~GvGAGAyIL~rFAl~hp~--rV~GLvLIn~~~ 157 (326)
T KOG2931|consen 98 EGYPYPSMDDLADMLPEVLDHFGLK----SVIGMGVGAGAYILARFALNHPE--RVLGLVLINCDP 157 (326)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCcc----eEEEecccccHHHHHHHHhcChh--heeEEEEEecCC
Confidence 2456667777777777776544 68889999999999999999999 899999998654
No 325
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=97.20 E-value=0.0019 Score=73.95 Aligned_cols=98 Identities=22% Similarity=0.172 Sum_probs=73.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CC-CEEEEEcCCchhHHHHh----hcCcE---EcCHHHHhccCCEEEecCCCc-cc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LS-AQVWIIEIDPICALQAA----MEGFL---VVTMEYAKKYGDIFVTCTGNY-HV 878 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~G-a~ViV~d~dp~r~~~A~----~~G~~---v~~~~e~l~~aDvvi~atG~~-~v 878 (1027)
.-++++|+|+|..|+..++.+.. +. -+|.|+++++.++.... ..|.. +.+.++++.++|||++||++. .+
T Consensus 127 ~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P~ 206 (325)
T TIGR02371 127 DSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKPV 206 (325)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCcE
Confidence 46899999999999987766654 33 37999999998765422 23533 457889999999999998654 45
Q ss_pred CcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
+..+ .+|+|+.+.++|.+ ..|+|.+.+.
T Consensus 207 ~~~~---~l~~g~~v~~vGs~~p~~~Eld~~~l~ 237 (325)
T TIGR02371 207 VKAD---WVSEGTHINAIGADAPGKQELDPEILK 237 (325)
T ss_pred ecHH---HcCCCCEEEecCCCCcccccCCHHHHh
Confidence 6544 57999999999976 3588866544
No 326
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=97.18 E-value=0.0012 Score=69.20 Aligned_cols=94 Identities=15% Similarity=0.212 Sum_probs=58.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh------------------------hcCcE-EcCHHHHhccC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA------------------------MEGFL-VVTMEYAKKYG 866 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~------------------------~~G~~-v~~~~e~l~~a 866 (1027)
+|+|+|+|.+|+++|..+...|.+|+++|+++.....+. ..... ..+++++. .+
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~a 79 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-DA 79 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-TE
T ss_pred CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-hh
Confidence 689999999999999999999999999999986543211 11222 23455555 89
Q ss_pred CEEEecCCCcccCcHHHH----hcCCCCeEEEEecCCCcccchhhhh
Q psy15208 867 DIFVTCTGNYHVITHDHM----RDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~----~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
|+||+|....--+.++.| +.++++++++..... +.+..+.
T Consensus 80 dlViEai~E~l~~K~~~~~~l~~~~~~~~ilasnTSs---l~i~~la 123 (180)
T PF02737_consen 80 DLVIEAIPEDLELKQELFAELDEICPPDTILASNTSS---LSISELA 123 (180)
T ss_dssp SEEEE-S-SSHHHHHHHHHHHHCCS-TTSEEEE--SS---S-HHHHH
T ss_pred heehhhccccHHHHHHHHHHHHHHhCCCceEEecCCC---CCHHHHH
Confidence 999999754321233333 356788888766553 4444443
No 327
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=97.16 E-value=0.0024 Score=68.93 Aligned_cols=83 Identities=22% Similarity=0.236 Sum_probs=59.6
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCc----------hhHHHHhhcC-cEE------cCHHHHh-cc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDP----------ICALQAAMEG-FLV------VTMEYAK-KY 865 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp----------~r~~~A~~~G-~~v------~~~~e~l-~~ 865 (1027)
+..+.|++|+|.|+|.+|+.+|+.|...|++ |.|.|.+. .........+ ... .+.++.+ .+
T Consensus 18 ~~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 97 (217)
T cd05211 18 GDSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQDYFPGEAILGLD 97 (217)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccccCcccccCcccceecc
Confidence 4568999999999999999999999999995 77789887 4433332222 211 1113332 36
Q ss_pred CCEEEecCCCcccCcHHHHhcCC
Q psy15208 866 GDIFVTCTGNYHVITHDHMRDMK 888 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~~~~mk 888 (1027)
+||++.|+.. ++++.+....++
T Consensus 98 ~DVlipaA~~-~~i~~~~a~~l~ 119 (217)
T cd05211 98 VDIFAPCALG-NVIDLENAKKLK 119 (217)
T ss_pred ccEEeecccc-CccChhhHhhcC
Confidence 8999998854 478988888787
No 328
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.14 E-value=0.0017 Score=60.16 Aligned_cols=84 Identities=21% Similarity=0.252 Sum_probs=61.6
Q ss_pred EEEEEcCChhHHHHHHHHHhCC---CEEEEE-cCCchhHHH-HhhcCcEEc--CHHHHhccCCEEEecCCCcccCcHH--
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALS---AQVWII-EIDPICALQ-AAMEGFLVV--TMEYAKKYGDIFVTCTGNYHVITHD-- 882 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~G---a~ViV~-d~dp~r~~~-A~~~G~~v~--~~~e~l~~aDvvi~atG~~~vi~~~-- 882 (1027)
+++|+|+|.+|..+++.+...| .+|+++ +++|.+..+ +...++.+. +..+++.++|+||.|+.... +..-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~-~~~v~~ 79 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQ-LPEVLS 79 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGG-HHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHH-HHHHHH
Confidence 6899999999999999999999 899954 999988766 456666644 58899999999999985443 2211
Q ss_pred HHhcCCCCeEEEEe
Q psy15208 883 HMRDMKDQAIVCNI 896 (1027)
Q Consensus 883 ~~~~mk~gailvNv 896 (1027)
.+....++.+++.+
T Consensus 80 ~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 80 EIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHTTSEEEEE
T ss_pred HHhhccCCCEEEEe
Confidence 12335567777765
No 329
>PRK09414 glutamate dehydrogenase; Provisional
Probab=97.14 E-value=0.0016 Score=76.93 Aligned_cols=100 Identities=16% Similarity=0.110 Sum_probs=68.7
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEE-c----------CCchhHHHHhh------------cCcEEcCHHH
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWII-E----------IDPICALQAAM------------EGFLVVTMEY 861 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~-d----------~dp~r~~~A~~------------~G~~v~~~~e 861 (1027)
+..+.|++|+|.|+|.+|+.+|+.+..+|++|+++ | +|+....+... .|.+..+.++
T Consensus 227 ~~~l~g~rVaIqGfGnVG~~~A~~L~~~GakVVavsDs~G~iyn~~GLD~~~L~~~k~~~~~~l~~~~~~~~~~~i~~~~ 306 (445)
T PRK09414 227 GDSFEGKRVVVSGSGNVAIYAIEKAQQLGAKVVTCSDSSGYVYDEEGIDLEKLKEIKEVRRGRISEYAEEFGAEYLEGGS 306 (445)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCchhhhhhhcCCeecCCcc
Confidence 66789999999999999999999999999998876 8 66543222111 0233344444
Q ss_pred Hhc-cCCEEEecCCCcccCcHHHHhcCC-CCeEEEEecCCCcccchh
Q psy15208 862 AKK-YGDIFVTCTGNYHVITHDHMRDMK-DQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 862 ~l~-~aDvvi~atG~~~vi~~~~~~~mk-~gailvNvG~~d~eid~~ 906 (1027)
.+. ++||+|.|+- .++|+.+....++ ++|.+|- +..+..+..+
T Consensus 307 i~~~d~DVliPaAl-~n~It~~~a~~i~~~~akiIv-EgAN~p~t~~ 351 (445)
T PRK09414 307 PWSVPCDIALPCAT-QNELDEEDAKTLIANGVKAVA-EGANMPSTPE 351 (445)
T ss_pred ccccCCcEEEecCC-cCcCCHHHHHHHHHcCCeEEE-cCCCCCCCHH
Confidence 443 6999999874 5678888777773 4555553 4445555444
No 330
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.14 E-value=0.0014 Score=74.24 Aligned_cols=90 Identities=16% Similarity=0.092 Sum_probs=72.3
Q ss_pred ccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC------HHHHh-----ccCCEEEecCC
Q psy15208 808 IAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT------MEYAK-----KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~------~~e~l-----~~aDvvi~atG 874 (1027)
-.|++|+|.| .|.+|..+++.++.+|++|+++..++.+...+...|++ +.+ ..+.+ ...|++++++|
T Consensus 137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G 216 (325)
T TIGR02825 137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVG 216 (325)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCC
Confidence 5799999999 49999999999999999999998888888778888874 222 22222 13799999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
... + ...++.++++|.++++|..
T Consensus 217 ~~~-~-~~~~~~l~~~G~iv~~G~~ 239 (325)
T TIGR02825 217 GEF-S-NTVIGQMKKFGRIAICGAI 239 (325)
T ss_pred HHH-H-HHHHHHhCcCcEEEEecch
Confidence 764 3 5669999999999999864
No 331
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.13 E-value=0.0013 Score=67.30 Aligned_cols=89 Identities=16% Similarity=0.130 Sum_probs=60.0
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc--C-HHHHhccCCEEEecCCCcccCcHH
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV--T-MEYAKKYGDIFVTCTGNYHVITHD 882 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~--~-~~e~l~~aDvvi~atG~~~vi~~~ 882 (1027)
+.+.|++|+|+|.|.+|...++.|...|++|+|++.+....... .....+. . .++.+..+|+||.+|++.. ++..
T Consensus 9 l~l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp~~~~~l~~-l~~i~~~~~~~~~~dl~~a~lViaaT~d~e-~N~~ 86 (157)
T PRK06719 9 FNLHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSPEICKEMKE-LPYITWKQKTFSNDDIKDAHLIYAATNQHA-VNMM 86 (157)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCccCHHHHh-ccCcEEEecccChhcCCCceEEEECCCCHH-HHHH
Confidence 46899999999999999999999999999999995433222221 1222221 1 2234678999999998875 5544
Q ss_pred HHhcCCCCeEEEEec
Q psy15208 883 HMRDMKDQAIVCNIG 897 (1027)
Q Consensus 883 ~~~~mk~gailvNvG 897 (1027)
.-...+.+ .++|+.
T Consensus 87 i~~~a~~~-~~vn~~ 100 (157)
T PRK06719 87 VKQAAHDF-QWVNVV 100 (157)
T ss_pred HHHHHHHC-CcEEEC
Confidence 33333444 466754
No 332
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.11 E-value=0.0027 Score=70.67 Aligned_cols=107 Identities=17% Similarity=0.156 Sum_probs=72.5
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-h---cC-cEEcCHHHH-hccCC
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-M---EG-FLVVTMEYA-KKYGD 867 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~---~G-~~v~~~~e~-l~~aD 867 (1027)
.|++..+.+. +....+|+++|+|.|.+|+.++..++..|++|+++++++.++.... . .| ....+.++. ..++|
T Consensus 102 ~G~~~~l~~~-~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~D 180 (270)
T TIGR00507 102 IGLVSDLERL-IPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDELPLHRVD 180 (270)
T ss_pred HHHHHHHHhc-CCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhhcccCcc
Confidence 5667776552 3346799999999999999999999999999999999886654321 1 12 223344433 35799
Q ss_pred EEEecCCCc--ccCcH--HHHhcCCCCeEEEEecCCCc
Q psy15208 868 IFVTCTGNY--HVITH--DHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 868 vvi~atG~~--~vi~~--~~~~~mk~gailvNvG~~d~ 901 (1027)
+||+||+.. .-+.. -..+.++++.+++++...+.
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~ 218 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPG 218 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCC
Confidence 999999753 11110 01345788888888866543
No 333
>PRK14030 glutamate dehydrogenase; Provisional
Probab=97.11 E-value=0.0018 Score=76.33 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=68.7
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEE--------Ec---CCchhH--H-HHh------------h-cCcEEc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWI--------IE---IDPICA--L-QAA------------M-EGFLVV 857 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV--------~d---~dp~r~--~-~A~------------~-~G~~v~ 857 (1027)
+..+.|++|+|-|+|.+|..+|+.|..+||+|++ +| +|+.+. + +.. . .|.+.+
T Consensus 223 g~~l~g~~vaIQGfGnVG~~aA~~L~e~GakvVavSD~~G~i~d~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~ga~~i 302 (445)
T PRK14030 223 GIDIKGKTVAISGFGNVAWGAATKATELGAKVVTISGPDGYIYDPDGISGEKIDYMLELRASGNDIVAPYAEKFPGSTFF 302 (445)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHHHHhcCccHHHHHhcCCCCEEc
Confidence 6679999999999999999999999999999988 77 554331 1 110 1 144555
Q ss_pred CHHHHhc-cCCEEEecCCCcccCcHHHHhcC-CCCeEEEEecCCCcccchh
Q psy15208 858 TMEYAKK-YGDIFVTCTGNYHVITHDHMRDM-KDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 858 ~~~e~l~-~aDvvi~atG~~~vi~~~~~~~m-k~gailvNvG~~d~eid~~ 906 (1027)
+.++.+. .|||++-|. ..+.|+.+..+.+ +++|.+|-= ..+.....+
T Consensus 303 ~~~~~~~~~cDVliPcA-l~n~I~~~na~~l~~~~ak~V~E-gAN~p~t~e 351 (445)
T PRK14030 303 AGKKPWEQKVDIALPCA-TQNELNGEDADKLIKNGVLCVAE-VSNMGCTAE 351 (445)
T ss_pred CCccceeccccEEeecc-ccccCCHHHHHHHHHcCCeEEEe-CCCCCCCHH
Confidence 5555553 699999765 4567998888887 444555543 334444433
No 334
>PLN02712 arogenate dehydrogenase
Probab=97.10 E-value=0.0015 Score=81.24 Aligned_cols=92 Identities=16% Similarity=0.214 Sum_probs=70.1
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHh-ccCCEEEecCCCc---ccCcHHH
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAK-KYGDIFVTCTGNY---HVITHDH 883 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l-~~aDvvi~atG~~---~vi~~~~ 883 (1027)
.-++|+|||+|.+|..+|+.++..|.+|++++++..+ ..|...|+.. .+.++++ .++|+|+.|+... .++..-.
T Consensus 51 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~-~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~l~ 129 (667)
T PLN02712 51 TQLKIAIIGFGNYGQFLAKTLISQGHTVLAHSRSDHS-LAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKSLP 129 (667)
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHhhh
Confidence 4468999999999999999999999999999987544 4566778764 4566655 4699999998744 2333222
Q ss_pred HhcCCCCeEEEEecCCCc
Q psy15208 884 MRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~ 901 (1027)
+..|++++++++++....
T Consensus 130 ~~~l~~g~iVvDv~SvK~ 147 (667)
T PLN02712 130 LQRLKRNTLFVDVLSVKE 147 (667)
T ss_pred hhcCCCCeEEEECCCCcH
Confidence 345899999999987653
No 335
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed
Probab=97.09 E-value=0.0036 Score=78.25 Aligned_cols=129 Identities=20% Similarity=0.225 Sum_probs=98.9
Q ss_pred CCccceEeecccccccccccchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEcCC
Q psy15208 769 KLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIEID 842 (1027)
Q Consensus 769 ~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~d 842 (1027)
.|.+||| .|..+||+--...++.. .++..+...++++.|+|.-|.++|+.+...|+ +++++|..
T Consensus 151 ~~~ip~f----------~DD~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~ 220 (752)
T PRK07232 151 RMDIPVF----------HDDQHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAAAIACLNLLVALGAKKENIIVCDSK 220 (752)
T ss_pred hcCCCee----------ccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHHHHHHHHHHHHcCCCcccEEEEcCC
Confidence 4677777 46778998877666543 55677889999999999999999999999999 78888743
Q ss_pred ------------chhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc
Q psy15208 843 ------------PICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK 910 (1027)
Q Consensus 843 ------------p~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~ 910 (1027)
+.+...|.. -...++.++++.+|++|-+++ +++++++.++.|.+..++.-..-...|+..+....
T Consensus 221 G~i~~~r~~~~~~~k~~~a~~--~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifalsNP~~E~~p~~a~~ 297 (752)
T PRK07232 221 GVIYKGRTEGMDEWKAAYAVD--TDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALANPDPEITPEEAKA 297 (752)
T ss_pred CeecCCCcccccHHHHHHhcc--CCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecCCCCccCCHHHHHH
Confidence 223333433 223579999999999998887 78999999999998888876666666777664443
No 336
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.08 E-value=0.0011 Score=76.83 Aligned_cols=92 Identities=26% Similarity=0.385 Sum_probs=67.8
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-----cCHHHHhccCCEEEecCCCcccCcH-HHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-----VTMEYAKKYGDIFVTCTGNYHVITH-DHM 884 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-----~~~~e~l~~aDvvi~atG~~~vi~~-~~~ 884 (1027)
++|+|+|.|.||..+|+.++..|.+|.++++++.....+...+..+ .++++++.++|+||.|+....+..- +.+
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl~~l 80 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALLAEL 80 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHHHHH
Confidence 5799999999999999999999999999988876554443434322 3467778899999999876532110 123
Q ss_pred h--cCCCCeEEEEecCCCcc
Q psy15208 885 R--DMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 885 ~--~mk~gailvNvG~~d~e 902 (1027)
. .+++++++.++|....+
T Consensus 81 ~~~~l~~~~ivtDv~SvK~~ 100 (359)
T PRK06545 81 ADLELKPGVIVTDVGSVKGA 100 (359)
T ss_pred hhcCCCCCcEEEeCccccHH
Confidence 3 37889999999987643
No 337
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=97.07 E-value=0.057 Score=61.28 Aligned_cols=130 Identities=18% Similarity=0.091 Sum_probs=89.7
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhH
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICA 846 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~ 846 (1027)
..+||||.-++ .-| ..|++.|. +.+..| .+.|.+|+++|- +++-+..+..++.+|++|.++-+.....
T Consensus 119 ~~vPVINag~~-~~H-------PtQaL~Dl~Ti~e~~g-~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~ 189 (304)
T PRK00779 119 STVPVINGLTD-LSH-------PCQILADLLTIYEHRG-SLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEP 189 (304)
T ss_pred CCCCEEeCCCC-CCC-------hHHHHHHHHHHHHHhC-CcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccCC
Confidence 67999998642 111 23555544 333334 478999999998 6688999999999999999884322111
Q ss_pred ---H---HHhhcCcE---EcCHHHHhccCCEEEecC----C------------CcccCcHHHHhcCCCCeEEEEecCC--
Q psy15208 847 ---L---QAAMEGFL---VVTMEYAKKYGDIFVTCT----G------------NYHVITHDHMRDMKDQAIVCNIGHF-- 899 (1027)
Q Consensus 847 ---~---~A~~~G~~---v~~~~e~l~~aDvvi~at----G------------~~~vi~~~~~~~mk~gailvNvG~~-- 899 (1027)
. .+...|.. ..+++++++++|+|.+.. + ..--++.+.++.+|+++++...+..
T Consensus 190 ~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~l~~~~~~~ivmHplP~~R 269 (304)
T PRK00779 190 DPEIVEKIAKETGASIEVTHDPKEAVKGADVVYTDVWVSMGQEAEAEERLKAFAPYQVNEELMALAKPDAIFMHCLPAHR 269 (304)
T ss_pred CHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEecCccccccchhHHHHHHHhcccCCCHHHHHhcCCCeEEecCCCccC
Confidence 1 13445643 357899999999998642 1 1235777888889999999998884
Q ss_pred Ccccchhhh
Q psy15208 900 DNEIEVEKL 908 (1027)
Q Consensus 900 d~eid~~~l 908 (1027)
..|++-+.+
T Consensus 270 ~~Ei~~~V~ 278 (304)
T PRK00779 270 GEEVTDEVI 278 (304)
T ss_pred CCcccHHHh
Confidence 567776644
No 338
>PRK04940 hypothetical protein; Provisional
Probab=97.06 E-value=0.0094 Score=62.24 Aligned_cols=68 Identities=10% Similarity=0.118 Sum_probs=51.7
Q ss_pred CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC-----CC--------------C--CCCc--EEEEEeCC
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL-----IP--------------E--VPKN--TIIIHGEL 163 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~-----l~--------------~--i~~P--vLiIhG~~ 163 (1027)
+++.|+|+|+||+.|..++.++.- ..|++.|++.++. +. . +..| .+++..+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~-----~aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~~~~p~r~~vllq~g 134 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI-----RQVIFNPNLFPEENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRN 134 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC-----CEEEECCCCChHHHHHHHhCCCcchhhhhHHHHHHhhhcCcccEEEEEeCC
Confidence 478999999999999999999843 4788898876552 11 0 2334 58999999
Q ss_pred CCCCChHHHHhhhCCC
Q psy15208 164 DEIIPLKDVFLWANPL 179 (1027)
Q Consensus 164 D~iVP~~~~~~l~~~~ 179 (1027)
|++..+..+.......
T Consensus 135 DEvLDyr~a~~~y~~~ 150 (180)
T PRK04940 135 DEVLDSQRTAEELHPY 150 (180)
T ss_pred CcccCHHHHHHHhccC
Confidence 9999999888655543
No 339
>PRK08507 prephenate dehydrogenase; Validated
Probab=97.06 E-value=0.0017 Score=72.35 Aligned_cols=89 Identities=18% Similarity=0.264 Sum_probs=67.3
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHHHhhcCcE--EcCHHHHhccCCEEEecCCCcccCc--HHHHh
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQAAMEGFL--VVTMEYAKKYGDIFVTCTGNYHVIT--HDHMR 885 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~A~~~G~~--v~~~~e~l~~aDvvi~atG~~~vi~--~~~~~ 885 (1027)
+|+|+|+|.+|..+|..++..|. +|+++|+++.+...+...|+. ..+.+++. ++|+||.|+....+.. .+...
T Consensus 2 ~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~~-~aD~Vilavp~~~~~~~~~~l~~ 80 (275)
T PRK08507 2 KIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEELK-KCDVIFLAIPVDAIIEILPKLLD 80 (275)
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHHh-cCCEEEEeCcHHHHHHHHHHHhc
Confidence 69999999999999999998885 799999998877777777763 34555654 5999999987653222 12234
Q ss_pred cCCCCeEEEEecCCCcc
Q psy15208 886 DMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 886 ~mk~gailvNvG~~d~e 902 (1027)
++++++++.+|....+
T Consensus 81 -l~~~~iv~d~gs~k~~ 96 (275)
T PRK08507 81 -IKENTTIIDLGSTKAK 96 (275)
T ss_pred -cCCCCEEEECccchHH
Confidence 7889999998886443
No 340
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=97.05 E-value=0.002 Score=77.97 Aligned_cols=89 Identities=17% Similarity=0.194 Sum_probs=65.9
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-----------hhcC-------------cEE-cCHHHHhcc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-----------AMEG-------------FLV-VTMEYAKKY 865 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-----------~~~G-------------~~v-~~~~e~l~~ 865 (1027)
++|+|||.|..|.++|..+...|..|+++|+++.....+ ...| ... .++ +.+..
T Consensus 8 ~~V~VIGaG~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~-~~~~~ 86 (507)
T PRK08268 8 ATVAVIGAGAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEAL-ADLAD 86 (507)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCH-HHhCC
Confidence 789999999999999999999999999999999766552 3344 333 344 44679
Q ss_pred CCEEEecCCCcccCcHHH---Hh-cCCCCeEEE-EecCCC
Q psy15208 866 GDIFVTCTGNYHVITHDH---MR-DMKDQAIVC-NIGHFD 900 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~---~~-~mk~gailv-NvG~~d 900 (1027)
+|+||+|.....-+.... ++ .++++++++ |++..+
T Consensus 87 aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl~ 126 (507)
T PRK08268 87 CDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLS 126 (507)
T ss_pred CCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCCC
Confidence 999999986543233332 33 458899995 887764
No 341
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.03 E-value=0.002 Score=72.30 Aligned_cols=88 Identities=13% Similarity=0.169 Sum_probs=63.3
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-----------HhhcCc-------------E-EcCHHHHhcc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-----------AAMEGF-------------L-VVTMEYAKKY 865 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-----------A~~~G~-------------~-v~~~~e~l~~ 865 (1027)
++|+|+|.|.+|.++|..+...|.+|+++|++|..... +...|. . ..++ +++..
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~~ 84 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFAD 84 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhCC
Confidence 48999999999999999999999999999999976544 222332 1 2234 55789
Q ss_pred CCEEEecCCCcccCcHH---HHhcC--CCCeEEEEecCC
Q psy15208 866 GDIFVTCTGNYHVITHD---HMRDM--KDQAIVCNIGHF 899 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~---~~~~m--k~gailvNvG~~ 899 (1027)
+|+||+|....--+..+ .++.+ ++++++++....
T Consensus 85 ~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS~ 123 (286)
T PRK07819 85 RQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTSS 123 (286)
T ss_pred CCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 99999997644212222 24555 789998876554
No 342
>PLN02527 aspartate carbamoyltransferase
Probab=97.03 E-value=0.12 Score=58.63 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=84.3
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC---hhHHHHHHHHHhC-CCEEEEEcCCc
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG---DVGKGSAQAMRAL-SAQVWIIEIDP 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~a~~~-Ga~ViV~d~dp 843 (1027)
..+||||.=+...-| .-|.+.|. +.+..+ .+.|.+|+++|-+ ++.+..+..+..+ |++|.++-+..
T Consensus 117 ~~vPVINa~~g~~~H-------PtQ~LaDl~Ti~e~~g-~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~ 188 (306)
T PLN02527 117 AEIPVINAGDGPGQH-------PTQALLDVYTIQREIG-RLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDV 188 (306)
T ss_pred CCCCEEECCCCCCCC-------hHHHHHHHHHHHHHhC-CcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCc
Confidence 678999874432222 12444433 222234 4789999999976 6788888888887 99998874322
Q ss_pred h-----hHHHHhhcCcE---EcCHHHHhccCCEEEecCCC----------------cccCcHHHHhcCCCCeEEEEecCC
Q psy15208 844 I-----CALQAAMEGFL---VVTMEYAKKYGDIFVTCTGN----------------YHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 844 ~-----r~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~----------------~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
. -...+...|.. ..+++++++++|||.+.... .-.++.+.++..|+++++...+.-
T Consensus 189 ~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~~q~e~~~~~~~~~~~~~~~y~v~~~ll~~a~~~~ivmHclPR 268 (306)
T PLN02527 189 VKMKDDIKDYLTSKGVEWEESSDLMEVASKCDVLYQTRIQRERFGERIDLYEAARGKYIVDKKVMDVLPKHAVVMHPLPR 268 (306)
T ss_pred cCCCHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEECCcchhhhcchHHHHHHhCCCceECHHHHhccCCCCEEECCCCC
Confidence 1 12224444554 35799999999999874321 124555667778888888877765
Q ss_pred Ccccchhhh
Q psy15208 900 DNEIEVEKL 908 (1027)
Q Consensus 900 d~eid~~~l 908 (1027)
..||+-+.+
T Consensus 269 g~Ei~~~V~ 277 (306)
T PLN02527 269 LDEITTDVD 277 (306)
T ss_pred cccccHHHh
Confidence 566665533
No 343
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.03 E-value=0.0039 Score=69.93 Aligned_cols=83 Identities=13% Similarity=0.197 Sum_probs=60.1
Q ss_pred hhHHHHHhhhcCc-cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHH-hhcC----cEEc-C---HHHH
Q psy15208 794 ESLIDGIKRATDV-MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQA-AMEG----FLVV-T---MEYA 862 (1027)
Q Consensus 794 ~s~~~~i~r~t~~-~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A-~~~G----~~v~-~---~~e~ 862 (1027)
.+++.++.+.... .+.|++|+|+|+|..|++++..|+..|+ +|+|+++++.++..- ...+ +... . +.+.
T Consensus 108 ~G~~~~l~~~~~~~~~~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~ 187 (282)
T TIGR01809 108 DGIAGALANIGKFEPLAGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAI 187 (282)
T ss_pred HHHHHHHHhhCCccccCCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhc
Confidence 5677777653212 4789999999999999999999999998 799999998776542 2221 1111 1 2244
Q ss_pred hccCCEEEecCCCc
Q psy15208 863 KKYGDIFVTCTGNY 876 (1027)
Q Consensus 863 l~~aDvvi~atG~~ 876 (1027)
+.++|+||+||+..
T Consensus 188 ~~~~DiVInaTp~g 201 (282)
T TIGR01809 188 EKAAEVLVSTVPAD 201 (282)
T ss_pred ccCCCEEEECCCCC
Confidence 57899999999654
No 344
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.03 E-value=0.0015 Score=76.72 Aligned_cols=124 Identities=18% Similarity=0.115 Sum_probs=82.5
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC-cEEEEEcCCC--CCCCCC-CCC-----Cc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG-YISIRMNFRG--VGASSG-TYD-----SG 86 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G-y~Vla~DlrG--hG~S~g-~~~-----~~ 86 (1027)
-++.=+|.|+. ..+..|++|++||++...|+.....+ --..|+++| +-|+.+++|- .|.-.. .+. ..
T Consensus 79 CL~LNIwaP~~--~a~~~PVmV~IHGG~y~~Gs~s~~~y--dgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~ 154 (491)
T COG2272 79 CLYLNIWAPEV--PAEKLPVMVYIHGGGYIMGSGSEPLY--DGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFAS 154 (491)
T ss_pred ceeEEeeccCC--CCCCCcEEEEEeccccccCCCccccc--ChHHHHhcCCEEEEEeCcccccceeeehhhccccccccc
Confidence 56777888882 13568999999998877777665434 345678888 9999999972 121110 000 01
Q ss_pred cchHHHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCC-cCCccEEEEEccCC
Q psy15208 87 NGETDDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDK-EISIKILILISVAV 144 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~ 144 (1027)
..-+.|...+++|++++ ++.+ .|.|+|+|.|++.++.+.+. |. ...++.+|+.|+..
T Consensus 155 n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 155 NLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 12478888999999873 5554 49999999999988776654 43 12355566666554
No 345
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=97.02 E-value=0.0016 Score=73.15 Aligned_cols=86 Identities=15% Similarity=0.197 Sum_probs=70.1
Q ss_pred EEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCc------HHHHhcC
Q psy15208 815 IIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVIT------HDHMRDM 887 (1027)
Q Consensus 815 ViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~------~~~~~~m 887 (1027)
+||.|.+|..+|+.+...|.+|+++|+++.+.......|.... +..+++.++|+||.|..+...+. ......+
T Consensus 1 ~IGlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~~ 80 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPKV 80 (288)
T ss_pred CCcccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhcC
Confidence 5899999999999999999999999999988777777787644 68888999999999987643222 2334678
Q ss_pred CCCeEEEEecCCC
Q psy15208 888 KDQAIVCNIGHFD 900 (1027)
Q Consensus 888 k~gailvNvG~~d 900 (1027)
++|.++++++..+
T Consensus 81 ~~g~~vid~st~~ 93 (288)
T TIGR01692 81 AKGSLLIDCSTID 93 (288)
T ss_pred CCCCEEEECCCCC
Confidence 9999999998654
No 346
>PRK06823 ornithine cyclodeaminase; Validated
Probab=97.02 E-value=0.0038 Score=71.10 Aligned_cols=98 Identities=16% Similarity=0.249 Sum_probs=74.7
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHH----HhhcCcEE---cCHHHHhccCCEEEecCCCc-cc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQ----AAMEGFLV---VTMEYAKKYGDIFVTCTGNY-HV 878 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~----A~~~G~~v---~~~~e~l~~aDvvi~atG~~-~v 878 (1027)
.-++++|+|+|..++..++.+.. +.. +|.|+++++.++.. ....|+.+ .+.++++.++|||++||+.. .+
T Consensus 127 d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIV~taT~s~~P~ 206 (315)
T PRK06823 127 HVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAANLIVTTTPSREPL 206 (315)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHhcCCCEEEEecCCCCce
Confidence 46899999999999988877765 333 79999999987653 22225543 36889999999999988754 56
Q ss_pred CcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
+..+ .+|+|+.+..+|.+ ..|+|.+.+.
T Consensus 207 ~~~~---~l~~G~hi~~iGs~~p~~~Eld~~~l~ 237 (315)
T PRK06823 207 LQAE---DIQPGTHITAVGADSPGKQELDAELVA 237 (315)
T ss_pred eCHH---HcCCCcEEEecCCCCcccccCCHHHHh
Confidence 6644 58999999999986 3588876554
No 347
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.01 E-value=0.0046 Score=74.62 Aligned_cols=171 Identities=15% Similarity=0.140 Sum_probs=116.7
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
.+++++++..+| +++.-+..-++....++.|++|+.-| ..+.+.+ ..|....-.|.++|+.-...=-||=|.-.+.
T Consensus 418 ~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYG--aYG~s~~-p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~ 494 (682)
T COG1770 418 VSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYG--AYGISMD-PSFSIARLSLLDRGFVYAIAHVRGGGELGRA 494 (682)
T ss_pred EEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEec--cccccCC-cCcccceeeeecCceEEEEEEeecccccChH
Confidence 456778887777 77776654433222356788777555 4554443 3454444457788997666666887665532
Q ss_pred C------CCccchHHHHHHHHHHHHHh-CC-CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------
Q psy15208 83 Y------DSGNGETDDMEILLRYIQKK-YP-YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------- 147 (1027)
Q Consensus 83 ~------~~~~~~~~Dv~avl~~L~~~-~~-~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------- 147 (1027)
+ ..=.+-..|..+..++|.+. +. ...++++|-|.||++.-.++.+.|+ .++++|+--|.+...
T Consensus 495 WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--lf~~iiA~VPFVDvltTMlD~s 572 (682)
T COG1770 495 WYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--LFAGIIAQVPFVDVLTTMLDPS 572 (682)
T ss_pred HHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh--hhhheeecCCccchhhhhcCCC
Confidence 2 11134578888888888774 22 2369999999999999999999999 789999998864311
Q ss_pred ---------------------------CCC----CCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 ---------------------------LIP----EVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 ---------------------------~l~----~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+.. +-..|+|+..|..|+-|....-.+|..++
T Consensus 573 lPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkL 635 (682)
T COG1770 573 LPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKL 635 (682)
T ss_pred CCCCccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHH
Confidence 011 22367899999999999988877776554
No 348
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.01 E-value=0.0034 Score=71.43 Aligned_cols=98 Identities=23% Similarity=0.217 Sum_probs=71.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHhhc----C--cEE-cCHHHHhccCCEEEecCCCc-c
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAAME----G--FLV-VTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~~~----G--~~v-~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
...++|+|+|+|..|+.+++.+.. ++. +|.|+++++.++.+.... | +.+ .+.++++.++|||++||+.. .
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~~p 202 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLSTEP 202 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCCCC
Confidence 357999999999999999976554 564 799999998776653322 4 333 46788899999999988754 4
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC---cccchhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD---NEIEVEKL 908 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d---~eid~~~l 908 (1027)
++.. +.+++|+.+.-+|... .|++...+
T Consensus 203 vl~~---~~l~~g~~i~~ig~~~~~~~El~~~~~ 233 (314)
T PRK06141 203 LVRG---EWLKPGTHLDLVGNFTPDMRECDDEAI 233 (314)
T ss_pred EecH---HHcCCCCEEEeeCCCCcccccCCHHHH
Confidence 5554 4579999777777652 46775543
No 349
>PLN02477 glutamate dehydrogenase
Probab=97.00 E-value=0.0025 Score=74.72 Aligned_cols=97 Identities=21% Similarity=0.257 Sum_probs=66.8
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEE-EEcCC----------chhHHHHh--------hcCcEEcCHHHHh-
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVW-IIEID----------PICALQAA--------MEGFLVVTMEYAK- 863 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~Vi-V~d~d----------p~r~~~A~--------~~G~~v~~~~e~l- 863 (1027)
.+..+.|++|+|.|+|.+|+.+|+.|...|++|+ |.|.+ +....+.. ..+.+.++.++.+
T Consensus 200 ~g~~l~g~~VaIqGfGnVG~~~A~~L~e~GakVVaVsD~~G~iy~~~GLD~~~L~~~k~~~g~l~~~~~a~~i~~~e~l~ 279 (410)
T PLN02477 200 HGKSIAGQTFVIQGFGNVGSWAAQLIHEKGGKIVAVSDITGAVKNENGLDIPALRKHVAEGGGLKGFPGGDPIDPDDILV 279 (410)
T ss_pred cCCCccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCchhccccceEecCcccee
Confidence 4667899999999999999999999999999988 77876 32222211 1122344445554
Q ss_pred ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccc
Q psy15208 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIE 904 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid 904 (1027)
..+||++-|. ..++|+.+....++-..++ +..+..+.
T Consensus 280 ~~~DvliP~A-l~~~I~~~na~~i~ak~I~---egAN~p~t 316 (410)
T PLN02477 280 EPCDVLIPAA-LGGVINKENAADVKAKFIV---EAANHPTD 316 (410)
T ss_pred ccccEEeecc-ccccCCHhHHHHcCCcEEE---eCCCCCCC
Confidence 3799999775 4457999888888644333 44455553
No 350
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.00 E-value=0.0028 Score=70.42 Aligned_cols=126 Identities=15% Similarity=0.190 Sum_probs=81.5
Q ss_pred EEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCC-CChHHHH-HHHHHHHhCCcEEEEEcCCCCCCCCC----
Q psy15208 8 FNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGT-MDNKVVQ-TLVRVMLSLGYISIRMNFRGVGASSG---- 81 (1027)
Q Consensus 8 i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs-~~~~~~~-~la~~La~~Gy~Vla~DlrGhG~S~g---- 81 (1027)
..++++.|.+.+.++...+ +.+|++|-.|=.|.+.-+ +. ..+. .-.+.+. +.|.++=+|.|||..-..
T Consensus 2 h~v~t~~G~v~V~v~G~~~----~~kp~ilT~HDvGlNh~scF~-~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~ 75 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPK----GNKPAILTYHDVGLNHKSCFQ-GFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPE 75 (283)
T ss_dssp EEEEETTEEEEEEEESS------TTS-EEEEE--TT--HHHHCH-HHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----T
T ss_pred ceeccCceEEEEEEEecCC----CCCceEEEeccccccchHHHH-HHhcchhHHHHh-hceEEEEEeCCCCCCCcccccc
Confidence 4688999999999886654 368999999975321111 11 1111 1234444 479999999999976432
Q ss_pred --CCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 82 --TYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 82 --~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.+++.+.+++++..+++++.-+ .++-+|--.|+.+-.++|..+|+ ++.|+|++++...
T Consensus 76 ~y~yPsmd~LAe~l~~Vl~~f~lk----~vIg~GvGAGAnIL~rfAl~~p~--~V~GLiLvn~~~~ 135 (283)
T PF03096_consen 76 GYQYPSMDQLAEMLPEVLDHFGLK----SVIGFGVGAGANILARFALKHPE--RVLGLILVNPTCT 135 (283)
T ss_dssp T-----HHHHHCTHHHHHHHHT-------EEEEEETHHHHHHHHHHHHSGG--GEEEEEEES---S
T ss_pred cccccCHHHHHHHHHHHHHhCCcc----EEEEEeeccchhhhhhccccCcc--ceeEEEEEecCCC
Confidence 2456677788888888877655 79999999999999999999999 8999999998653
No 351
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=97.00 E-value=0.0029 Score=74.59 Aligned_cols=101 Identities=18% Similarity=0.201 Sum_probs=70.2
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEE-EEcCC----------chhH---HH----------Hh---hcCcEE
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVW-IIEID----------PICA---LQ----------AA---MEGFLV 856 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~Vi-V~d~d----------p~r~---~~----------A~---~~G~~v 856 (1027)
.+..+.|++|+|-|+|.+|..+|+.|..+|++|+ |.|.+ +... .+ .. ..|.+.
T Consensus 231 ~~~~l~Gk~VaVqG~GnVg~~aa~~L~e~GakVVavSD~~G~iy~~~Gld~~~l~~l~~~k~~~~g~i~~~~~~~~~a~~ 310 (454)
T PTZ00079 231 LNDSLEGKTVVVSGSGNVAQYAVEKLLQLGAKVLTMSDSDGYIHEPNGFTKEKLAYLMDLKNVKRGRLKEYAKHSSTAKY 310 (454)
T ss_pred cCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCCcEECCCCCCHHHHHHHHHHHhhcCCcHHhhhhccCCcEE
Confidence 3667999999999999999999999999999988 88877 3222 00 00 114444
Q ss_pred cCHHHHh-ccCCEEEecCCCcccCcHHHHhcC-CCCeEEEEecCCCcccchh
Q psy15208 857 VTMEYAK-KYGDIFVTCTGNYHVITHDHMRDM-KDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 857 ~~~~e~l-~~aDvvi~atG~~~vi~~~~~~~m-k~gailvNvG~~d~eid~~ 906 (1027)
++.++.+ ..|||++-|. ..+.|+.+..+.+ +.++.+|-=|. +..+..+
T Consensus 311 ~~~~~~~~~~cDI~iPcA-~~n~I~~~~a~~l~~~~ak~V~EgA-N~p~t~e 360 (454)
T PTZ00079 311 VPGKKPWEVPCDIAFPCA-TQNEINLEDAKLLIKNGCKLVAEGA-NMPTTIE 360 (454)
T ss_pred eCCcCcccCCccEEEecc-ccccCCHHHHHHHHHcCCeEEEecC-CCCCCHH
Confidence 4444444 3699999775 4567898887766 77777665443 4444444
No 352
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.00 E-value=0.0026 Score=72.46 Aligned_cols=87 Identities=17% Similarity=0.142 Sum_probs=68.7
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhh-cCcE-Ec-----CHHHHh-----ccCCEEEecCCC
Q psy15208 810 GKIAVIIGY-GDVGKGSAQAMRALSA-QVWIIEIDPICALQAAM-EGFL-VV-----TMEYAK-----KYGDIFVTCTGN 875 (1027)
Q Consensus 810 Gk~VvViG~-G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~-~G~~-v~-----~~~e~l-----~~aDvvi~atG~ 875 (1027)
|++|+|.|. |.+|..+++.++.+|+ +|++++.++.+...+.. .|++ +. ++.+.+ ...|++++++|.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 499999998 9999999999999999 89999888877666654 7764 22 122222 247999999987
Q ss_pred cccCcHHHHhcCCCCeEEEEecC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
.. + .+.++.|+++|.++.+|.
T Consensus 235 ~~-~-~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EI-S-DTVISQMNENSHIILCGQ 255 (345)
T ss_pred HH-H-HHHHHHhccCCEEEEEee
Confidence 64 3 566999999999999985
No 353
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=96.99 E-value=0.0028 Score=73.65 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=72.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHh-----ccCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAK-----KYGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l-----~~aDvvi~a 872 (1027)
...|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +.+. .+.+ ...|+++++
T Consensus 188 ~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~ 267 (373)
T cd08299 188 VTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEV 267 (373)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEEC
Confidence 3579999999999999999999999999 899999999888888888874 2321 1211 148999999
Q ss_pred CCCcccCcHHHHhc-CCCCeEEEEecCCC
Q psy15208 873 TGNYHVITHDHMRD-MKDQAIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~~vi~~~~~~~-mk~gailvNvG~~d 900 (1027)
+|....+... +.. +++++.++.+|..+
T Consensus 268 ~g~~~~~~~~-~~~~~~~~G~~v~~g~~~ 295 (373)
T cd08299 268 IGRLDTMKAA-LASCHEGYGVSVIVGVPP 295 (373)
T ss_pred CCCcHHHHHH-HHhhccCCCEEEEEccCC
Confidence 9976555543 444 46899999999763
No 354
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.97 E-value=0.0027 Score=71.60 Aligned_cols=88 Identities=16% Similarity=0.185 Sum_probs=68.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCCcccCcH------HHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGNYHVITH------DHM 884 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~~------~~~ 884 (1027)
+|++||.|.+|..+|+.+...|.+|+++|+++. .......|.. ..+..+++.++|+||.+..+...+.. ..+
T Consensus 2 ~Ig~IGlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~ 80 (292)
T PRK15059 2 KLGFIGLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT 80 (292)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence 689999999999999999999999999999884 3444556775 44677888899999998876532221 124
Q ss_pred hcCCCCeEEEEecCCC
Q psy15208 885 RDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d 900 (1027)
..+++|.++++++..+
T Consensus 81 ~~~~~g~ivvd~sT~~ 96 (292)
T PRK15059 81 KASLKGKTIVDMSSIS 96 (292)
T ss_pred ccCCCCCEEEECCCCC
Confidence 5578899999998764
No 355
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.96 E-value=0.0021 Score=73.63 Aligned_cols=93 Identities=17% Similarity=0.224 Sum_probs=74.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HH----HHh--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----ME----YAK--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~----e~l--~~aDvvi~atG 874 (1027)
-.|++|+|.|.|.+|+.+++.++.+|+ .|++++.++.+...+...|++ +++ .. +.. ...|++++++|
T Consensus 165 ~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g 244 (351)
T cd08285 165 KLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGG 244 (351)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCCCCcEEEECCC
Confidence 579999999999999999999999999 589999988888778888864 222 11 112 24799999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
....+. +.++.++++++++++|..+.
T Consensus 245 ~~~~~~-~~~~~l~~~G~~v~~g~~~~ 270 (351)
T cd08285 245 GQDTFE-QALKVLKPGGTISNVNYYGE 270 (351)
T ss_pred CHHHHH-HHHHHhhcCCEEEEecccCC
Confidence 765444 55899999999999998753
No 356
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.96 E-value=0.0033 Score=70.58 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=62.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh--------------cC-------------cEEcCHHHHh
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM--------------EG-------------FLVVTMEYAK 863 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~--------------~G-------------~~v~~~~e~l 863 (1027)
++|+|+|+|.+|.++|..++..|.+|+++|+++.+...+.. .| ....+-.+++
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 83 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRTSTSYESL 83 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEeeCCHHHh
Confidence 68999999999999999999999999999999866543211 11 1222222567
Q ss_pred ccCCEEEecCCCcccCcHHHH----hcCCCCeEEEEecCC
Q psy15208 864 KYGDIFVTCTGNYHVITHDHM----RDMKDQAIVCNIGHF 899 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~----~~mk~gailvNvG~~ 899 (1027)
.++|+||+|.....-+..+.| +.+++++++++....
T Consensus 84 ~~aDlVieav~e~~~~k~~~~~~l~~~~~~~~il~S~tsg 123 (291)
T PRK06035 84 SDADFIVEAVPEKLDLKRKVFAELERNVSPETIIASNTSG 123 (291)
T ss_pred CCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEEcCCC
Confidence 889999999865532222322 346788888765443
No 357
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.95 E-value=0.003 Score=70.93 Aligned_cols=80 Identities=21% Similarity=0.217 Sum_probs=59.2
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHh-hc-----CcEEc---CHHHHh
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAA-ME-----GFLVV---TMEYAK 863 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~-~~-----G~~v~---~~~e~l 863 (1027)
.++...+.+. ...+.+++|+|+|+|..|+.++..|...|+ +|+++++++.++.... .. ...+. ++.+.+
T Consensus 112 ~G~~~~l~~~-~~~~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~ 190 (284)
T PRK12549 112 SGFAESFRRG-LPDASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAAL 190 (284)
T ss_pred HHHHHHHHhh-ccCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhh
Confidence 5667776543 234789999999999999999999999998 7999999987765422 21 12222 234467
Q ss_pred ccCCEEEecCC
Q psy15208 864 KYGDIFVTCTG 874 (1027)
Q Consensus 864 ~~aDvvi~atG 874 (1027)
.++|+||+||.
T Consensus 191 ~~aDiVInaTp 201 (284)
T PRK12549 191 AAADGLVHATP 201 (284)
T ss_pred CCCCEEEECCc
Confidence 78999999974
No 358
>TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II. All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's.
Probab=96.94 E-value=0.0029 Score=72.25 Aligned_cols=83 Identities=24% Similarity=0.207 Sum_probs=61.6
Q ss_pred EEEEcCChhHHHHHHHHHh-CCCE-EEEEcCCchhHHH-HhhcCcEE------------------c-CHHHHhccCCEEE
Q psy15208 813 AVIIGYGDVGKGSAQAMRA-LSAQ-VWIIEIDPICALQ-AAMEGFLV------------------V-TMEYAKKYGDIFV 870 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~-~Ga~-ViV~d~dp~r~~~-A~~~G~~v------------------~-~~~e~l~~aDvvi 870 (1027)
|+|+|||.||+.+++.+.. -+++ |.|.|.+|.++.. |...|++. . ++++++.++|+|+
T Consensus 1 VaInG~GrIGr~varav~~~~d~elVaVnD~~~~~~a~lA~~lgyds~~~~~~~~~~~~~~~l~v~g~~eeLl~~vDiVv 80 (333)
T TIGR01546 1 VGVNGYGTIGKRVADAVTKQDDMKLVGVTKTSPDFEAYRAKELGIPVYAASEEFIPRFEEAGIEVAGTLEDLLEKVDIVV 80 (333)
T ss_pred CEEECCcHHHHHHHHHHhhCCCcEEEEEecCChHHHHHHHHHhCCCEEeecCCcceEeccCceEecCCHHHHhhcCCEEE
Confidence 6899999999999998765 3566 4467888765433 44445443 1 3677788899999
Q ss_pred ecCCC-cccCcHHHHhcCCCCeEEEE
Q psy15208 871 TCTGN-YHVITHDHMRDMKDQAIVCN 895 (1027)
Q Consensus 871 ~atG~-~~vi~~~~~~~mk~gailvN 895 (1027)
+|||. .+..+.+.+..|+.+++++-
T Consensus 81 e~Tp~~~~~~na~~~~~~GakaVl~~ 106 (333)
T TIGR01546 81 DATPGGIGAKNKPLYEKAGVKAIFQG 106 (333)
T ss_pred ECCCCCCChhhHHHHHhCCcCEEEEC
Confidence 99985 47788888999998887753
No 359
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=96.94 E-value=0.0067 Score=70.09 Aligned_cols=130 Identities=18% Similarity=0.284 Sum_probs=97.5
Q ss_pred CCccceEeecccccccccccchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEcCC
Q psy15208 769 KLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIEID 842 (1027)
Q Consensus 769 ~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~d 842 (1027)
.+.+||| .|..+||+--+..++.. .+|..+...+|++.|+|.-|.+++..+++.|+ +|+++|+.
T Consensus 165 ~~~IPvF----------hDDqqGTaiv~lA~llnalk~~gk~l~d~kiv~~GAGAAgiaia~~l~~~g~~~~~i~~~D~~ 234 (432)
T COG0281 165 RMNIPVF----------HDDQQGTAIVTLAALLNALKLTGKKLKDQKIVINGAGAAGIAIADLLVAAGVKEENIFVVDRK 234 (432)
T ss_pred cCCCCcc----------cccccHHHHHHHHHHHHHHHHhCCCccceEEEEeCCcHHHHHHHHHHHHhCCCcccEEEEecC
Confidence 5788887 57788998877666554 55778999999999999999999999999999 59988764
Q ss_pred c-------------hhHHHHh-hcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 843 P-------------ICALQAA-MEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 843 p-------------~r~~~A~-~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
- .+...|. ..+-... ++++..+|+++-++|. ++++++.++.|.+..++.-..-...|+.-+..
T Consensus 235 G~l~~~r~~~~~~~~k~~~a~~~~~~~~~--~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfalaNP~pEi~Pe~a 311 (432)
T COG0281 235 GLLYDGREDLTMNQKKYAKAIEDTGERTL--DLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALANPTPEITPEDA 311 (432)
T ss_pred CcccCCCcccccchHHHHHHHhhhccccc--cccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecCCCCccCCHHHH
Confidence 2 1111121 1111111 4577889999999987 89999999999999888776666677776655
Q ss_pred hcc
Q psy15208 909 KKY 911 (1027)
Q Consensus 909 ~~~ 911 (1027)
.++
T Consensus 312 ~~~ 314 (432)
T COG0281 312 KEW 314 (432)
T ss_pred hhc
Confidence 544
No 360
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.93 E-value=0.0039 Score=71.24 Aligned_cols=86 Identities=16% Similarity=0.129 Sum_probs=68.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc--------C------cE-EcCHHHHhccCCEEEecCCC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME--------G------FL-VVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~--------G------~~-v~~~~e~l~~aDvvi~atG~ 875 (1027)
.+|+|+|+|.+|..+|..+...|.+|+++++++.+....... | +. ..++++++..+|+|+.++.+
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~~ 84 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVPS 84 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECch
Confidence 479999999999999999999999999999987654433322 3 22 33677788899999999877
Q ss_pred cccCcHHHHhcCCCCeEEEEecC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
..+ .+.++.++++.+++++.-
T Consensus 85 ~~~--~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 85 KAL--RETLAGLPRALGYVSCAK 105 (328)
T ss_pred HHH--HHHHHhcCcCCEEEEEee
Confidence 753 566788999998888755
No 361
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=96.92 E-value=0.009 Score=61.76 Aligned_cols=88 Identities=16% Similarity=0.184 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC-c
Q psy15208 53 VVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK-E 131 (1027)
Q Consensus 53 ~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~-~ 131 (1027)
.|..++..|.. .+.|+.+|++|++.+.....+...+ +....+.+....+..+++++||||||.++..++.+... .
T Consensus 14 ~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~ 89 (212)
T smart00824 14 EYARLAAALRG-RRDVSALPLPGFGPGEPLPASADAL---VEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARG 89 (212)
T ss_pred HHHHHHHhcCC-CccEEEecCCCCCCCCCCCCCHHHH---HHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCC
Confidence 57788888865 6899999999998765443332222 23344444444556689999999999999998887432 1
Q ss_pred CCccEEEEEccCC
Q psy15208 132 ISIKILILISVAV 144 (1027)
Q Consensus 132 ~~V~gLVli~p~~ 144 (1027)
..+.+++++++..
T Consensus 90 ~~~~~l~~~~~~~ 102 (212)
T smart00824 90 IPPAAVVLLDTYP 102 (212)
T ss_pred CCCcEEEEEccCC
Confidence 2578888777544
No 362
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=96.91 E-value=0.0038 Score=71.11 Aligned_cols=91 Identities=15% Similarity=0.080 Sum_probs=71.5
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cCcE-EcC------HHHHh-----ccCCEEEec
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EGFL-VVT------MEYAK-----KYGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G~~-v~~------~~e~l-----~~aDvvi~a 872 (1027)
.-.|++|+|.|. |.+|+.+++.++.+|++|+++..++.+...+.. .|++ +.+ ..+.+ ...|+++++
T Consensus 149 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~ 228 (338)
T cd08295 149 PKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDN 228 (338)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEEC
Confidence 357999999998 999999999999999999998888877776766 7764 222 22222 247999999
Q ss_pred CCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 873 TGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+|... + .+.++.++++|.++++|..
T Consensus 229 ~g~~~-~-~~~~~~l~~~G~iv~~G~~ 253 (338)
T cd08295 229 VGGKM-L-DAVLLNMNLHGRIAACGMI 253 (338)
T ss_pred CCHHH-H-HHHHHHhccCcEEEEeccc
Confidence 98743 3 4568999999999999864
No 363
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=96.91 E-value=0.0032 Score=76.10 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=65.4
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-----------hhcC-------------cE-EcCHHHHh
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-----------AMEG-------------FL-VVTMEYAK 863 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-----------~~~G-------------~~-v~~~~e~l 863 (1027)
.=++|+|||.|..|.++|+.+...|..|+++|+++.....+ ...| +. ..++ +++
T Consensus 4 ~~~kV~VIGaG~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~-~~l 82 (503)
T TIGR02279 4 NVVTVAVIGAGAMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDL-HAL 82 (503)
T ss_pred CccEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCH-HHh
Confidence 44689999999999999999999999999999998765432 2233 22 2344 456
Q ss_pred ccCCEEEecCCCcccCcHHHH----hcCCCCeEEE-EecCCC
Q psy15208 864 KYGDIFVTCTGNYHVITHDHM----RDMKDQAIVC-NIGHFD 900 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~----~~mk~gailv-NvG~~d 900 (1027)
.++|+||+|.....-+....| ..++++++|+ |++..+
T Consensus 83 ~~aDlVIEav~E~~~vK~~vf~~l~~~~~~~~IlasnTStl~ 124 (503)
T TIGR02279 83 ADAGLVIEAIVENLEVKKALFAQLEELCPADTIIASNTSSLS 124 (503)
T ss_pred CCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCC
Confidence 799999999865432333333 3478888887 776653
No 364
>PRK06046 alanine dehydrogenase; Validated
Probab=96.89 E-value=0.0053 Score=70.26 Aligned_cols=97 Identities=24% Similarity=0.247 Sum_probs=72.4
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHhh-----cCcE---EcCHHHHhccCCEEEecCCCc-c
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAAM-----EGFL---VVTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~~-----~G~~---v~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
.-++++|+|+|..|+..++.+.. .+. +|.++++++.++.+... .|+. +.+.++++. +|+|++||++. .
T Consensus 128 ~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~P 206 (326)
T PRK06046 128 DSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRKP 206 (326)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCCc
Confidence 35899999999999999988874 566 68889999876654332 2543 335778776 99999999765 4
Q ss_pred cCcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
++..+ .+|+|+.+..+|.+ ..|+|.+.+.
T Consensus 207 ~~~~~---~l~~g~hV~~iGs~~p~~~El~~~~~~ 238 (326)
T PRK06046 207 VVKAE---WIKEGTHINAIGADAPGKQELDPEILL 238 (326)
T ss_pred EecHH---HcCCCCEEEecCCCCCccccCCHHHHh
Confidence 56644 57999999999986 3678866444
No 365
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=96.89 E-value=0.0023 Score=72.78 Aligned_cols=93 Identities=18% Similarity=0.269 Sum_probs=72.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcC-----HHH----Hh--ccCCEEEecCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVT-----MEY----AK--KYGDIFVTCTG 874 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~-----~~e----~l--~~aDvvi~atG 874 (1027)
...|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|..... ..+ .. ...|++++++|
T Consensus 165 ~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~dvvid~~~ 244 (344)
T cd08284 165 VRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEPINFEDAEPVERVREATEGRGADVVLEAVG 244 (344)
T ss_pred CccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCeEEecCCcCHHHHHHHHhCCCCCCEEEECCC
Confidence 3579999999999999999999999997 899998777777777777753221 111 12 24799999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
....+. +.++.|++++.++.+|..+
T Consensus 245 ~~~~~~-~~~~~l~~~g~~v~~g~~~ 269 (344)
T cd08284 245 GAAALD-LAFDLVRPGGVISSVGVHT 269 (344)
T ss_pred CHHHHH-HHHHhcccCCEEEEECcCC
Confidence 765444 5589999999999999764
No 366
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.88 E-value=0.0036 Score=70.22 Aligned_cols=88 Identities=16% Similarity=0.113 Sum_probs=63.2
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-------------------------cCcE-EcCHHHHhc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-------------------------EGFL-VVTMEYAKK 864 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-------------------------~G~~-v~~~~e~l~ 864 (1027)
++|+|+|.|.+|.++|..++..|.+|+++|+++.....+.. .... ..++++++.
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~~ 83 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAVK 83 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHhc
Confidence 58999999999999999999999999999999865433221 1222 345778889
Q ss_pred cCCEEEecCCCcc----cCcHHHHhcCCCCeEEE-EecC
Q psy15208 865 YGDIFVTCTGNYH----VITHDHMRDMKDQAIVC-NIGH 898 (1027)
Q Consensus 865 ~aDvvi~atG~~~----vi~~~~~~~mk~gailv-NvG~ 898 (1027)
.+|+||+|....- .+-++.-+.++++++++ |.+.
T Consensus 84 ~aDlVieavpe~~~~k~~~~~~l~~~~~~~~ii~sntSt 122 (287)
T PRK08293 84 DADLVIEAVPEDPEIKGDFYEELAKVAPEKTIFATNSST 122 (287)
T ss_pred CCCEEEEeccCCHHHHHHHHHHHHhhCCCCCEEEECccc
Confidence 9999999987541 11122234578888885 4444
No 367
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=96.87 E-value=0.0024 Score=74.48 Aligned_cols=93 Identities=20% Similarity=0.243 Sum_probs=70.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhc-CcEEcC------HHHHhc------cCCEEEecC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAME-GFLVVT------MEYAKK------YGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~-G~~v~~------~~e~l~------~aDvvi~at 873 (1027)
..|++|+|.|.|.+|+.+++.++..|+ +|++++.++.+...+... +..+++ ..+.+. ..|++++++
T Consensus 183 ~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~v 262 (386)
T cd08283 183 KPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAV 262 (386)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECC
Confidence 578999999999999999999999998 599999998887777666 544432 112221 479999998
Q ss_pred CCcc--------------------cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYH--------------------VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~--------------------vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|... -.-.+.++.|++++.++++|...
T Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~ 309 (386)
T cd08283 263 GMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYG 309 (386)
T ss_pred CCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCC
Confidence 7531 12345688999999999998753
No 368
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=96.86 E-value=0.17 Score=58.00 Aligned_cols=121 Identities=18% Similarity=0.081 Sum_probs=81.1
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCchh
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDPIC 845 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp~r 845 (1027)
..+||||.-+. .-+ .-|.+.|. +.+..+ .+.|++|+++|-+ .+.+..+..+..+|++|.++-+....
T Consensus 122 ~~vPVINa~~~-~~H-------PtQaLaDl~Ti~e~~g-~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~ 192 (331)
T PRK02102 122 SGVPVWNGLTD-EWH-------PTQMLADFMTMKEHFG-PLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRICAPKELW 192 (331)
T ss_pred CCCCEEECCCC-CCC-------hHHHHHHHHHHHHHhC-CCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEECCcccc
Confidence 67999987552 122 23555443 223334 4789999999997 68899999999999999887332211
Q ss_pred H---------HHHhhcCcE---EcCHHHHhccCCEEEecC----C------------CcccCcHHHHh-cCCCCeEEEEe
Q psy15208 846 A---------LQAAMEGFL---VVTMEYAKKYGDIFVTCT----G------------NYHVITHDHMR-DMKDQAIVCNI 896 (1027)
Q Consensus 846 ~---------~~A~~~G~~---v~~~~e~l~~aDvvi~at----G------------~~~vi~~~~~~-~mk~gailvNv 896 (1027)
. ..+...|.. ..+++++++++|||++-+ | ..--++++.++ .+|+++++.-.
T Consensus 193 ~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~w~~~~~~~~~~~~~~~~~~y~vt~ell~~~~~~d~ivmH~ 272 (331)
T PRK02102 193 PEEELVALAREIAKETGAKITITEDPEEAVKGADVIYTDVWVSMGEEDEWEERIKLLKPYQVNMDLMKATGNPDVIFMHC 272 (331)
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcCcccCccccchHHHHHhccCCcCCHHHHhhhcCCCCEEECC
Confidence 1 112334644 357899999999998732 1 12346777777 47899999877
Q ss_pred cCC
Q psy15208 897 GHF 899 (1027)
Q Consensus 897 G~~ 899 (1027)
+..
T Consensus 273 lP~ 275 (331)
T PRK02102 273 LPA 275 (331)
T ss_pred CCC
Confidence 765
No 369
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.86 E-value=0.0061 Score=68.98 Aligned_cols=98 Identities=18% Similarity=0.088 Sum_probs=74.5
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHH-h----hcCcE---EcCHHHHhccCCEEEecCCCc-c
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQA-A----MEGFL---VVTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A-~----~~G~~---v~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
.-++++|+|+|..|+..++.+.. +.. +|.|+++++.++.+. . ..|.+ +.+.++++.++|||++||+.. .
T Consensus 116 da~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P 195 (301)
T PRK06407 116 NVENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTP 195 (301)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCc
Confidence 46999999999999988877775 444 799999999776541 1 12543 346899999999999998755 5
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC---cccchhhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD---NEIEVEKLK 909 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d---~eid~~~l~ 909 (1027)
++..+ .+|+|+-+.-+|.+. .|++.+.+.
T Consensus 196 ~~~~~---~l~pg~hV~aiGs~~p~~~El~~~~l~ 227 (301)
T PRK06407 196 IFNRK---YLGDEYHVNLAGSNYPNRREAEHSVLN 227 (301)
T ss_pred EecHH---HcCCCceEEecCCCCCCcccCCHHHHH
Confidence 66654 578999999999873 688876554
No 370
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.85 E-value=0.0036 Score=74.42 Aligned_cols=88 Identities=22% Similarity=0.198 Sum_probs=69.4
Q ss_pred EEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhH-HHHhhcCcEEc-CHHHHhccCCEEEecCCCcc---cCcHHHHh
Q psy15208 812 IAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICA-LQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYH---VITHDHMR 885 (1027)
Q Consensus 812 ~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~-~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~---vi~~~~~~ 885 (1027)
+|+|+| +|.+|..+|+.++..|.+|+++++++... ..+...|.... +..+++.++|+||.|++... ++ .+...
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl-~~l~~ 80 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVI-KEVAP 80 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHH-HHHHh
Confidence 689997 89999999999999999999999998664 34566677644 56788889999999987542 22 23345
Q ss_pred cCCCCeEEEEecCCC
Q psy15208 886 DMKDQAIVCNIGHFD 900 (1027)
Q Consensus 886 ~mk~gailvNvG~~d 900 (1027)
.+++++++++++...
T Consensus 81 ~l~~~~iViDvsSvK 95 (437)
T PRK08655 81 HVKEGSLLMDVTSVK 95 (437)
T ss_pred hCCCCCEEEEccccc
Confidence 678999999999753
No 371
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.85 E-value=0.0037 Score=70.56 Aligned_cols=88 Identities=10% Similarity=0.032 Sum_probs=68.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHH---hccCCEEEecCCCc---ccCcHHHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYA---KKYGDIFVTCTGNY---HVITHDHM 884 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~---l~~aDvvi~atG~~---~vi~~~~~ 884 (1027)
+|+|||.|.+|..+|+.+...|.+|+++|+++.+.......|... .+.+++ +..+|+|+.++... .++ .+..
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~-~~l~ 80 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVL-EELA 80 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHH-HHHH
Confidence 699999999999999999999999999999998877766666543 344443 45689999887654 333 2345
Q ss_pred hcCCCCeEEEEecCCC
Q psy15208 885 RDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d 900 (1027)
..+++|.++++++-..
T Consensus 81 ~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 81 PTLEKGDIVIDGGNSY 96 (298)
T ss_pred hhCCCCCEEEECCCCC
Confidence 6688999999987753
No 372
>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C ....
Probab=96.85 E-value=0.0052 Score=67.48 Aligned_cols=98 Identities=23% Similarity=0.315 Sum_probs=68.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEE--------cCCchhHHH----Hhhc-------------CcEEcCHH-
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWII--------EIDPICALQ----AAME-------------GFLVVTME- 860 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~--------d~dp~r~~~----A~~~-------------G~~v~~~~- 860 (1027)
.+.|++|+|-|+|.+|..+|+.+...|++|+.+ |.+.+...+ .... +.+..+-+
T Consensus 29 ~l~g~~v~IqGfG~VG~~~a~~l~~~Ga~vv~vsD~~G~i~~~~Gld~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 108 (244)
T PF00208_consen 29 SLEGKRVAIQGFGNVGSHAARFLAELGAKVVAVSDSSGAIYDPDGLDVEELLRIKEERGSRVDDYPLESPDGAEYIPNDD 108 (244)
T ss_dssp SSTTCEEEEEESSHHHHHHHHHHHHTTEEEEEEEESSEEEEETTEEHHHHHHHHHHHHSSHSTTGTHTCSSTSEEECHHC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCceEEEcCCCchHHHHHHHHHHhCCcccccccccccceeEecccc
Confidence 489999999999999999999999999997765 555433222 1111 22333443
Q ss_pred HHh-ccCCEEEecCCCcccCcHHHHh-cCCCCeEEEEecCCCcccchh
Q psy15208 861 YAK-KYGDIFVTCTGNYHVITHDHMR-DMKDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 861 e~l-~~aDvvi~atG~~~vi~~~~~~-~mk~gailvNvG~~d~eid~~ 906 (1027)
+.+ ..+||++-|. ..++|+.+... .+++++.+|--|. +..+..+
T Consensus 109 ~il~~~~DiliP~A-~~~~I~~~~~~~~i~~~akiIvegA-N~p~t~~ 154 (244)
T PF00208_consen 109 EILSVDCDILIPCA-LGNVINEDNAPSLIKSGAKIIVEGA-NGPLTPE 154 (244)
T ss_dssp HGGTSSSSEEEEES-SSTSBSCHHHCHCHHTT-SEEEESS-SSSBSHH
T ss_pred ccccccccEEEEcC-CCCeeCHHHHHHHHhccCcEEEeCc-chhccHH
Confidence 555 4799999884 56679999999 8998888876554 3444433
No 373
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=96.84 E-value=0.0034 Score=71.41 Aligned_cols=97 Identities=26% Similarity=0.253 Sum_probs=60.4
Q ss_pred CCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHH---Hhh-cCcE---EcCHHHHhccCCEEEecCCCcc---
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQ---AAM-EGFL---VVTMEYAKKYGDIFVTCTGNYH--- 877 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~---A~~-~G~~---v~~~~e~l~~aDvvi~atG~~~--- 877 (1027)
-++++|+|+|..++..++.+.. ++. +|.|+++++.++.. ... .|+. +.+.+++++++|||++||+...
T Consensus 128 ~~~l~viGaG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~~P 207 (313)
T PF02423_consen 128 ARTLGVIGAGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTPAP 207 (313)
T ss_dssp --EEEEE--SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCCCc
Confidence 4799999999999998887765 666 79999999976543 111 2554 3468999999999999987544
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC---cccchhhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD---NEIEVEKLK 909 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d---~eid~~~l~ 909 (1027)
++..+ .+++|+.+..+|... .|+|.+.+.
T Consensus 208 ~~~~~---~l~~g~hi~~iGs~~~~~~El~~~~~~ 239 (313)
T PF02423_consen 208 VFDAE---WLKPGTHINAIGSYTPGMRELDDELLK 239 (313)
T ss_dssp SB-GG---GS-TT-EEEE-S-SSTTBESB-HHHHH
T ss_pred cccHH---HcCCCcEEEEecCCCCchhhcCHHHhc
Confidence 66644 689999999999862 477766444
No 374
>KOG2565|consensus
Probab=96.83 E-value=0.0051 Score=69.54 Aligned_cols=115 Identities=17% Similarity=0.243 Sum_probs=78.4
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC---------CcEEEEEcCCCCCCCCCCCCCc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL---------GYISIRMNFRGVGASSGTYDSG 86 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~---------Gy~Vla~DlrGhG~S~g~~~~~ 86 (1027)
+|+.....|+..+.....-+++++|||+ |+.. -+-.++..|.+- -|.|++|.+||+|.|++.-...
T Consensus 135 ~iHFlhvk~p~~k~~k~v~PlLl~HGwP---Gsv~--EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G 209 (469)
T KOG2565|consen 135 KIHFLHVKPPQKKKKKKVKPLLLLHGWP---GSVR--EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG 209 (469)
T ss_pred eEEEEEecCCccccCCcccceEEecCCC---chHH--HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC
Confidence 5666665555322222223469999985 3332 244567777653 3799999999999999753332
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEE
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILI 138 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLV 138 (1027)
-+ +..++.++.-|--+.+..++++-|--+|+.++..+|..+|+ .|.|+=
T Consensus 210 Fn-~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPe--nV~GlH 258 (469)
T KOG2565|consen 210 FN-AAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPE--NVLGLH 258 (469)
T ss_pred cc-HHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcch--hhhHhh
Confidence 22 34455566666666677789999999999999999999999 566654
No 375
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.83 E-value=0.003 Score=71.88 Aligned_cols=92 Identities=18% Similarity=0.200 Sum_probs=71.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHHH----hc--cCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEYA----KK--YGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~----l~--~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|+.+++.++..|++ |++++.++.+...+...|.+ +.+ ..+. .. ..|++++++|
T Consensus 167 ~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g 246 (345)
T cd08287 167 RPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELTGGVGADAVLECVG 246 (345)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhcCCCCCCEEEECCC
Confidence 5799999999999999999999999995 88888887777767777764 222 1121 11 4899999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
....+. ..++.+++++.++++|...
T Consensus 247 ~~~~~~-~~~~~l~~~g~~v~~g~~~ 271 (345)
T cd08287 247 TQESME-QAIAIARPGGRVGYVGVPH 271 (345)
T ss_pred CHHHHH-HHHHhhccCCEEEEecccC
Confidence 765444 4588899999999998654
No 376
>PLN02688 pyrroline-5-carboxylate reductase
Probab=96.82 E-value=0.0045 Score=68.43 Aligned_cols=85 Identities=11% Similarity=0.125 Sum_probs=65.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC----EEEEE-cCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCcH---H
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA----QVWII-EIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVITH---D 882 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga----~ViV~-d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~~---~ 882 (1027)
+|++||+|.+|..+|+.+...|. +|+++ ++++.+...+...|+.+. +..+++.++|+||.|+.... +.. +
T Consensus 2 kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v~~~~-~~~vl~~ 80 (266)
T PLN02688 2 RVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVKPQV-VKDVLTE 80 (266)
T ss_pred eEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEECcHH-HHHHHHH
Confidence 68999999999999999999887 89999 999988777777888754 56777889999999984332 221 2
Q ss_pred HHhcCCCCeEEEEec
Q psy15208 883 HMRDMKDQAIVCNIG 897 (1027)
Q Consensus 883 ~~~~mk~gailvNvG 897 (1027)
....++++.+++++-
T Consensus 81 l~~~~~~~~~iIs~~ 95 (266)
T PLN02688 81 LRPLLSKDKLLVSVA 95 (266)
T ss_pred HHhhcCCCCEEEEec
Confidence 124467788877663
No 377
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.79 E-value=0.01 Score=67.48 Aligned_cols=129 Identities=21% Similarity=0.290 Sum_probs=84.5
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCc--EEEEEcCCCCCCCCCCC---CCccchHHHHHHHHHHHHHhCCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGY--ISIRMNFRGVGASSGTY---DSGNGETDDMEILLRYIQKKYPY 106 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy--~Vla~DlrGhG~S~g~~---~~~~~~~~Dv~avl~~L~~~~~~ 106 (1027)
.+.++||+||+ .-++++..+ ..++...+.|+ ..+.+-+|-.|.--+.. .+......+++.++.+|.+..+.
T Consensus 115 ~k~vlvFvHGf---Nntf~dav~-R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~ 190 (377)
T COG4782 115 AKTVLVFVHGF---NNTFEDAVY-RTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV 190 (377)
T ss_pred CCeEEEEEccc---CCchhHHHH-HHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC
Confidence 46789999997 334544333 45555555555 56778888666533211 11223567788999999988777
Q ss_pred CcEEEEEechhHHHHHHHHHhcCC------cCCccEEEEEccCCCc-------CCCCCCCCcEEEEEeCCC
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRLDK------EISIKILILISVAVKK-------WLIPEVPKNTIIIHGELD 164 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~p~------~~~V~gLVli~p~~~~-------~~l~~i~~PvLiIhG~~D 164 (1027)
..++|++||||.++.+....+.-- ..+++-+|+.+|-... ..+.....|..++...+|
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~~Q~~~mg~~~~~ft~~~s~dD 261 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFSSQIAAMGKPDPPFTLFVSRDD 261 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHHHHHHHhcCCCCCeeEEecccc
Confidence 889999999999999887765321 1246778888876531 134555566666665555
No 378
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=96.76 E-value=0.005 Score=71.23 Aligned_cols=100 Identities=23% Similarity=0.268 Sum_probs=71.4
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch------------------hH-HHHhhcCcEEcCHHHHhc-
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI------------------CA-LQAAMEGFLVVTMEYAKK- 864 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~------------------r~-~~A~~~G~~v~~~~e~l~- 864 (1027)
+..+.|++|.|-|+|++|+..|+.+...||+|++++.+.- +. ..+...|.++++-++.+.
T Consensus 202 g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~~~~~v~~~~ga~~i~~~e~~~~ 281 (411)
T COG0334 202 GDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKERRGSVAEYAGAEYITNEELLEV 281 (411)
T ss_pred CCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhhhhhhHHhhcCceEccccccccc
Confidence 4458999999999999999999999999999998765443 11 123334566666666664
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
.|||++-|. ..+.|+.+...++|...++ +..+.....+..
T Consensus 282 ~cDIl~PcA-~~n~I~~~na~~l~ak~V~---EgAN~P~t~eA~ 321 (411)
T COG0334 282 DCDILIPCA-LENVITEDNADQLKAKIVV---EGANGPTTPEAD 321 (411)
T ss_pred cCcEEcccc-cccccchhhHHHhhhcEEE---eccCCCCCHHHH
Confidence 699998764 5567899889999888332 444444444433
No 379
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=96.76 E-value=0.0039 Score=71.35 Aligned_cols=93 Identities=16% Similarity=0.232 Sum_probs=71.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHHH----hc--cCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEYA----KK--YGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~----l~--~aDvvi~at 873 (1027)
...|++|+|.|.|.+|+.+++.++.+|++ |++++.++.+...+...|++ +.+ ..+. .. ..|++++++
T Consensus 172 ~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~ 251 (350)
T cd08256 172 IKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEKIKELTGGYGCDIYIEAT 251 (350)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 35799999999999999999999999985 77788888777777777764 322 1111 11 379999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|....+. +.++.+++++.++++|.+.
T Consensus 252 g~~~~~~-~~~~~l~~~G~~v~~g~~~ 277 (350)
T cd08256 252 GHPSAVE-QGLNMIRKLGRFVEFSVFG 277 (350)
T ss_pred CChHHHH-HHHHHhhcCCEEEEEccCC
Confidence 8654444 4589999999999998764
No 380
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=96.74 E-value=0.25 Score=58.44 Aligned_cols=131 Identities=11% Similarity=0.132 Sum_probs=81.6
Q ss_pred HHHHHHHcCCCccceEeecccccccccccchhhhhhHHHH--HhhhcC---ccccCCEEEEEcCC---hhHHHHHHHHHh
Q psy15208 760 RLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATD---VMIAGKIAVIIGYG---DVGKGSAQAMRA 831 (1027)
Q Consensus 760 rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~---~~l~Gk~VvViG~G---~IG~~vA~~a~~ 831 (1027)
.++.|++ ...+||||.=++..-|. -|.+.|. +.+..+ -.+.|++|+++|-+ ++.+..+..+..
T Consensus 195 ~~~e~A~--~s~vPVINAgdg~~~HP-------tQaLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~ 265 (429)
T PRK11891 195 SVAEFAR--ATNLPVINGGDGPGEHP-------SQALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLAL 265 (429)
T ss_pred HHHHHHH--hCCCCEEECCCCCCCCc-------HHHHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHH
Confidence 3444444 36899998765433332 2444332 222212 13789999999995 788888888777
Q ss_pred C-CCEEEEEcCCchh-----HHHHhhcCcE---EcCHHHHhccCCEEEecCCC--------------cccCcHHHHhc-C
Q psy15208 832 L-SAQVWIIEIDPIC-----ALQAAMEGFL---VVTMEYAKKYGDIFVTCTGN--------------YHVITHDHMRD-M 887 (1027)
Q Consensus 832 ~-Ga~ViV~d~dp~r-----~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~--------------~~vi~~~~~~~-m 887 (1027)
+ |++|.++-+.... ..++...|.. +.+++++++++|||++..+- .-.++.+.++. .
T Consensus 266 ~~G~~v~l~~P~~~~~~~~~~~~~~~~G~~v~~~~d~~eav~~ADVVYt~~~q~er~~~~~~~~~~~~y~vt~ell~~~a 345 (429)
T PRK11891 266 YRGLKFTLVSPPTLEMPAYIVEQISRNGHVIEQTDDLAAGLRGADVVYATRIQKERFADESFEGYTPDFQINQALVDAVC 345 (429)
T ss_pred hcCCEEEEECCCccccCHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcCchhhcccCHHHHHhccCCcCCHHHHhCcc
Confidence 6 9999887432221 1223344643 46789999999999875431 12456666666 6
Q ss_pred CCCeEEEEecCC
Q psy15208 888 KDQAIVCNIGHF 899 (1027)
Q Consensus 888 k~gailvNvG~~ 899 (1027)
|+++++...+.-
T Consensus 346 k~dai~MHcLPr 357 (429)
T PRK11891 346 KPDTLIMHPLPR 357 (429)
T ss_pred CCCcEEECCCCC
Confidence 777777766553
No 381
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=96.74 E-value=0.005 Score=66.65 Aligned_cols=93 Identities=19% Similarity=0.232 Sum_probs=72.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHH-----hccCCEEEecCCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYA-----KKYGDIFVTCTGN 875 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~-----l~~aDvvi~atG~ 875 (1027)
...|++|+|.|.|.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+. -...|++++++|.
T Consensus 132 ~~~~~~vli~g~~~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~ 211 (271)
T cd05188 132 LKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGG 211 (271)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCC
Confidence 3579999999999999999999999999999999988777666666653 221 1111 1358999999987
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
... ....++.|++++.++++|..+
T Consensus 212 ~~~-~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 212 PET-LAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred HHH-HHHHHHhcccCCEEEEEccCC
Confidence 433 334588999999999999764
No 382
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.73 E-value=0.14 Score=58.28 Aligned_cols=129 Identities=21% Similarity=0.245 Sum_probs=85.9
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC---hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG---DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
..+||||.=+...-|. -|.+.|- +.+..| .+.|++|+++|-+ ++.+..+..++.+|++|.++-+...
T Consensus 122 ~~vPVINa~~g~~~HP-------tQ~LaDl~Ti~e~~G-~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~~ 193 (305)
T PRK00856 122 SDVPVINAGDGSHQHP-------TQALLDLLTIREEFG-RLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTL 193 (305)
T ss_pred CCCCEEECCCCCCCCc-------HHHHHHHHHHHHHhC-CCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCccc
Confidence 6799998754322221 2333332 222334 4789999999984 7999999999999999999844332
Q ss_pred hHHHHhhcCcE-EcCHHHHhccCCEEEecCCC-----------------cccCcHHHHhcCCCCeEEEEecCC--Ccccc
Q psy15208 845 CALQAAMEGFL-VVTMEYAKKYGDIFVTCTGN-----------------YHVITHDHMRDMKDQAIVCNIGHF--DNEIE 904 (1027)
Q Consensus 845 r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~-----------------~~vi~~~~~~~mk~gailvNvG~~--d~eid 904 (1027)
.... ...+. ..+++++++++|||++.... .-.++++.++.+|+++++.-+... ..|++
T Consensus 194 ~~~~--~~~~~~~~d~~ea~~~aDvvyt~~~q~e~~~~~~~~~~~~~~~~y~v~~~ll~~a~~~~~~mHcLPa~Rg~Ev~ 271 (305)
T PRK00856 194 LPEG--MPEYGVHTDLDEVIEDADVVMMLRVQKERMDGGLLPSYEEYKRSYGLTAERLALAKPDAIVMHPGPVNRGVEIA 271 (305)
T ss_pred Cccc--ccceEEECCHHHHhCCCCEEEECCcccccccccchHHHHHHhccCccCHHHHhhcCCCCEEECCCCCCCCCccC
Confidence 1111 11123 45789999999999875421 235777878888999999887773 55666
Q ss_pred hhhh
Q psy15208 905 VEKL 908 (1027)
Q Consensus 905 ~~~l 908 (1027)
-+.+
T Consensus 272 ~~V~ 275 (305)
T PRK00856 272 SDVA 275 (305)
T ss_pred HHHh
Confidence 5533
No 383
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=96.73 E-value=0.0032 Score=72.82 Aligned_cols=92 Identities=14% Similarity=0.148 Sum_probs=71.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCH-------HHHh-----ccCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTM-------EYAK-----KYGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l-----~~aDvvi~a 872 (1027)
...|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|++ +++. .+.+ ...|+++++
T Consensus 181 ~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~ 260 (365)
T cd05279 181 VTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEV 260 (365)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEEC
Confidence 35799999999999999999999999995 78888788777777777763 3221 1111 137999999
Q ss_pred CCCcccCcHHHHhcCC-CCeEEEEecCC
Q psy15208 873 TGNYHVITHDHMRDMK-DQAIVCNIGHF 899 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk-~gailvNvG~~ 899 (1027)
+|....+. ..++.++ ++++++.+|..
T Consensus 261 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 287 (365)
T cd05279 261 IGSADTLK-QALDATRLGGGTSVVVGVP 287 (365)
T ss_pred CCCHHHHH-HHHHHhccCCCEEEEEecC
Confidence 98755445 4588899 99999999864
No 384
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=96.72 E-value=0.0048 Score=67.89 Aligned_cols=93 Identities=22% Similarity=0.255 Sum_probs=72.9
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcC-cE-EcCHHHH---hccCCEEEecCCCcccCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEG-FL-VVTMEYA---KKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G-~~-v~~~~e~---l~~aDvvi~atG~~~vi~ 880 (1027)
...|++++|.|.|.+|..+++.++.+|++ |++++.++.+...+...| .+ +....+. -...|++++++|....+
T Consensus 95 ~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~- 173 (277)
T cd08255 95 PRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEIGGRGADVVIEASGSPSAL- 173 (277)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchhhhcCCCCCEEEEccCChHHH-
Confidence 35799999999999999999999999998 999998888877777777 32 2222211 13589999998866533
Q ss_pred HHHHhcCCCCeEEEEecCCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d 900 (1027)
...++.|++++.++++|..+
T Consensus 174 ~~~~~~l~~~g~~~~~g~~~ 193 (277)
T cd08255 174 ETALRLLRDRGRVVLVGWYG 193 (277)
T ss_pred HHHHHHhcCCcEEEEEeccC
Confidence 45689999999999998764
No 385
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.71 E-value=0.0052 Score=68.72 Aligned_cols=88 Identities=19% Similarity=0.191 Sum_probs=61.3
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-----------HhhcC-------------cEEcCHHHHhccC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-----------AAMEG-------------FLVVTMEYAKKYG 866 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-----------A~~~G-------------~~v~~~~e~l~~a 866 (1027)
++|+|+|.|.+|..+|..++..|.+|+++|+++.+... ....| ..+.+-.+.+..+
T Consensus 4 ~kI~VIG~G~mG~~ia~~la~~g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~a 83 (282)
T PRK05808 4 QKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDLDDLKDA 83 (282)
T ss_pred cEEEEEccCHHHHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHHHhccC
Confidence 57999999999999999999999999999999976632 22233 2323223457889
Q ss_pred CEEEecCCCcccCcH----HHHhcCCCCeEE-EEecC
Q psy15208 867 DIFVTCTGNYHVITH----DHMRDMKDQAIV-CNIGH 898 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~----~~~~~mk~gail-vNvG~ 898 (1027)
|+||.|......+.. +.-+.+++++++ .|++.
T Consensus 84 DlVi~av~e~~~~k~~~~~~l~~~~~~~~il~s~ts~ 120 (282)
T PRK05808 84 DLVIEAATENMDLKKKIFAQLDEIAKPEAILATNTSS 120 (282)
T ss_pred CeeeecccccHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 999999853211222 223457888888 44544
No 386
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.71 E-value=0.0034 Score=70.14 Aligned_cols=93 Identities=23% Similarity=0.296 Sum_probs=67.7
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchh--HHHHhhcCcE--E-cC-HHHHhccCCEEEecCCCc---ccCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPIC--ALQAAMEGFL--V-VT-MEYAKKYGDIFVTCTGNY---HVIT 880 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r--~~~A~~~G~~--v-~~-~~e~l~~aDvvi~atG~~---~vi~ 880 (1027)
-++|+|+|+|-||..+|+.++..|-.|.+++.|... ...+...|.. . .+ ..+++..+|+||-|++-. .++.
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l~ 82 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVLK 82 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHHH
Confidence 478999999999999999999999988777666644 3445545552 1 22 256677899999988644 2222
Q ss_pred HHHHhcCCCCeEEEEecCCCccc
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEI 903 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~ei 903 (1027)
+....+|+|++|..+|.....+
T Consensus 83 -~l~~~l~~g~iv~Dv~S~K~~v 104 (279)
T COG0287 83 -ELAPHLKKGAIVTDVGSVKSSV 104 (279)
T ss_pred -HhcccCCCCCEEEecccccHHH
Confidence 2233689999999999986543
No 387
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.70 E-value=0.0051 Score=58.96 Aligned_cols=83 Identities=25% Similarity=0.358 Sum_probs=59.2
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC--------HHHH-hccCCEEEecCCCcc--cCcH
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT--------MEYA-KKYGDIFVTCTGNYH--VITH 881 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~--------~~e~-l~~aDvvi~atG~~~--vi~~ 881 (1027)
|+|+|+|.+|+.+++.|+..+.+|+++|.|+.+..++...|+.+.. ++++ +.++|.++.++++.. +...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~~ 80 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLIA 80 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHHH
Confidence 6899999999999999999666999999999998889999987542 1221 456898888887652 2222
Q ss_pred HHHhcCCCCeEEEE
Q psy15208 882 DHMRDMKDQAIVCN 895 (1027)
Q Consensus 882 ~~~~~mk~gailvN 895 (1027)
..++.+-+...++-
T Consensus 81 ~~~r~~~~~~~ii~ 94 (116)
T PF02254_consen 81 LLARELNPDIRIIA 94 (116)
T ss_dssp HHHHHHTTTSEEEE
T ss_pred HHHHHHCCCCeEEE
Confidence 33444445555543
No 388
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.69 E-value=0.0034 Score=71.47 Aligned_cols=89 Identities=19% Similarity=0.145 Sum_probs=67.8
Q ss_pred ccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-C-----HHH--Hh--ccCCEEEecCCCc
Q psy15208 808 IAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-T-----MEY--AK--KYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~-----~~e--~l--~~aDvvi~atG~~ 876 (1027)
..|++|+|.|. |.+|+.+++.++.+|++|+++..+. +...+...|++.. + ..+ .. ...|+++++.|..
T Consensus 176 ~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 254 (350)
T cd08274 176 GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAKALGGEPVDVVADVVGGP 254 (350)
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHH
Confidence 57999999999 9999999999999999988876554 5666666776422 1 111 11 2489999999875
Q ss_pred ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
. ....++.|+.++.++++|..
T Consensus 255 ~--~~~~~~~l~~~G~~v~~g~~ 275 (350)
T cd08274 255 L--FPDLLRLLRPGGRYVTAGAI 275 (350)
T ss_pred H--HHHHHHHhccCCEEEEeccc
Confidence 3 34568999999999999854
No 389
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=96.69 E-value=0.2 Score=57.64 Aligned_cols=129 Identities=16% Similarity=0.060 Sum_probs=83.8
Q ss_pred HHHHHHcCCCccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC--hhHHHHHHHHHhCCCEE
Q psy15208 761 LRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG--DVGKGSAQAMRALSAQV 836 (1027)
Q Consensus 761 l~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~V 836 (1027)
++.|++ ...+||||..+ ..-| .-|.+.|- +.+..+..+.|++|+++|-+ .+.+..+..+..+|++|
T Consensus 115 ~~~~a~--~~~vPVINa~~-~~~H-------PtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v 184 (334)
T PRK01713 115 VNELAE--YAGVPVFNGLT-DEFH-------PTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDV 184 (334)
T ss_pred HHHHHH--hCCCCEEECCC-CCCC-------hHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEE
Confidence 344443 36789999844 2222 23555543 33333424789999999987 47888899999999999
Q ss_pred EEEcCCchhH---------HHHhhcCcE---EcCHHHHhccCCEEEecC----CC-------------cccCcHHHHhcC
Q psy15208 837 WIIEIDPICA---------LQAAMEGFL---VVTMEYAKKYGDIFVTCT----GN-------------YHVITHDHMRDM 887 (1027)
Q Consensus 837 iV~d~dp~r~---------~~A~~~G~~---v~~~~e~l~~aDvvi~at----G~-------------~~vi~~~~~~~m 887 (1027)
.++-+..... ..+...|.. ..+++++++++|||.+.+ |. .-.++.+.++..
T Consensus 185 ~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvVyt~~w~sm~~~~~~~~~~~~~~~~y~v~~ell~~a 264 (334)
T PRK01713 185 RICAPKALLPEASLVEMCEKFAKESGARITVTDDIDKAVKGVDFVHTDVWVSMGEPLETWGERIKLLMPYQVTPELMKRT 264 (334)
T ss_pred EEECCchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcceeecccchhhHHHHHHhccCCcCCHHHHhcc
Confidence 9884322110 113334643 457999999999998732 21 123676777776
Q ss_pred -CCCeEEEEecCC
Q psy15208 888 -KDQAIVCNIGHF 899 (1027)
Q Consensus 888 -k~gailvNvG~~ 899 (1027)
|+++++...+..
T Consensus 265 ~k~~aivmH~lP~ 277 (334)
T PRK01713 265 GNPKVKFMHCLPA 277 (334)
T ss_pred CCCCCEEECCCCC
Confidence 789999887775
No 390
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=96.69 E-value=0.23 Score=57.14 Aligned_cols=122 Identities=13% Similarity=0.021 Sum_probs=78.7
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcC-ccccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATD-VMIAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~-~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
..+||||.-+. .-| .-|.+.|- +.+.-+ -.+.|.+|+++|-+ ++.+..+..++.+|++|.++-+...
T Consensus 121 ~~vPVINa~~~-~~H-------PtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~ 192 (336)
T PRK03515 121 AGVPVWNGLTN-EFH-------PTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRLVAPKAC 192 (336)
T ss_pred CCCCEEECCCC-CCC-------hHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEEECCchh
Confidence 67999986432 111 23555443 222222 24789999999987 5899999999999999998843221
Q ss_pred h---H------HHHhhcCcE---EcCHHHHhccCCEEEecC----CC-------------cccCcHHHHhcC-CCCeEEE
Q psy15208 845 C---A------LQAAMEGFL---VVTMEYAKKYGDIFVTCT----GN-------------YHVITHDHMRDM-KDQAIVC 894 (1027)
Q Consensus 845 r---~------~~A~~~G~~---v~~~~e~l~~aDvvi~at----G~-------------~~vi~~~~~~~m-k~gailv 894 (1027)
. . ..+...|.. ..+++++++++|||.+.+ |. .--++.+.++.. |+++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd~W~sm~~~~~~~~er~~~~~~y~v~~~lm~~a~k~~~ivm 272 (336)
T PRK03515 193 WPEAALVTECRALAQKNGGNITLTEDIAEGVKGADFIYTDVWVSMGEPKEVWAERIALLRPYQVNSKMMQLTGNPQVKFL 272 (336)
T ss_pred cCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEecCcccCcchhHHHHHHHHhccCCccCHHHHhcccCCCCEEE
Confidence 1 0 113334643 357999999999998742 11 123566667764 7888887
Q ss_pred EecCC
Q psy15208 895 NIGHF 899 (1027)
Q Consensus 895 NvG~~ 899 (1027)
.++..
T Consensus 273 HcLP~ 277 (336)
T PRK03515 273 HCLPA 277 (336)
T ss_pred CCCCC
Confidence 77664
No 391
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=96.68 E-value=0.006 Score=68.69 Aligned_cols=90 Identities=22% Similarity=0.144 Sum_probs=71.1
Q ss_pred ccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh-----ccCCEEEecCCC
Q psy15208 808 IAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK-----KYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l-----~~aDvvi~atG~ 875 (1027)
..|++|+|.| .|.+|..+++.++.+|++|+++..++.+...+...|++ +.+ ..+.+ ...|++++++|.
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~ 221 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGG 221 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCH
Confidence 5799999999 59999999999999999999998888777777778864 222 22222 237999999987
Q ss_pred cccCcHHHHhcCCCCeEEEEecCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.. + ...++.++++|.++++|..
T Consensus 222 ~~-~-~~~~~~l~~~G~iv~~g~~ 243 (329)
T cd08294 222 EF-S-STVLSHMNDFGRVAVCGSI 243 (329)
T ss_pred HH-H-HHHHHhhccCCEEEEEcch
Confidence 43 3 4568999999999999864
No 392
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.67 E-value=0.0049 Score=66.59 Aligned_cols=92 Identities=10% Similarity=0.032 Sum_probs=63.9
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHH--HHhhcCcEEcC---HHHHhccCCEEEecCCCcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL--QAAMEGFLVVT---MEYAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~--~A~~~G~~v~~---~~e~l~~aDvvi~atG~~~vi 879 (1027)
.+.+.|++|+|+|.|.++..=++.|...||+|+|+-.+..... .+....+++.. -.+.+..+++||.||+.+. +
T Consensus 20 ~l~~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~-v 98 (223)
T PRK05562 20 SLLSNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEK-L 98 (223)
T ss_pred EEECCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHH-H
Confidence 3456799999999999999988999999999999943322222 22222333322 2344678999999998775 6
Q ss_pred cHHHHhcCCCCeEEEEec
Q psy15208 880 THDHMRDMKDQAIVCNIG 897 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG 897 (1027)
+....+..+...+++|+.
T Consensus 99 N~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 99 NNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred HHHHHHHHHHcCCeEEEc
Confidence 776556666656777764
No 393
>PLN02342 ornithine carbamoyltransferase
Probab=96.67 E-value=0.24 Score=57.20 Aligned_cols=130 Identities=17% Similarity=0.059 Sum_probs=88.3
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchh-
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPIC- 845 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r- 845 (1027)
..+||||.-+. .-| .-|.+.|- +.+..| .+.|.+|+++|-+. +-+..+..+..+|++|.++-+....
T Consensus 161 ~~vPVINA~~~-~~H-------PtQaLaDl~Ti~e~~G-~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~~ 231 (348)
T PLN02342 161 SSVPVINGLTD-YNH-------PCQIMADALTIIEHIG-RLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYEP 231 (348)
T ss_pred CCCCEEECCCC-CCC-------hHHHHHHHHHHHHHhC-CcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCccccc
Confidence 67999998553 112 23555543 333334 48999999999865 8888889999999999887332211
Q ss_pred ----HHHHhhcC---cE-EcCHHHHhccCCEEEecC----CC------------cccCcHHHHhcCCCCeEEEEecCC--
Q psy15208 846 ----ALQAAMEG---FL-VVTMEYAKKYGDIFVTCT----GN------------YHVITHDHMRDMKDQAIVCNIGHF-- 899 (1027)
Q Consensus 846 ----~~~A~~~G---~~-v~~~~e~l~~aDvvi~at----G~------------~~vi~~~~~~~mk~gailvNvG~~-- 899 (1027)
...+...| +. ..+++++++++|||++.+ +. .-.++.+.++.+|+++++...+..
T Consensus 232 ~~~~~~~a~~~g~~~~~~~~d~~eav~~aDVvy~~~W~s~~~~e~~~~~~~~~~~y~vt~ell~~ak~~aivMHpLP~~r 311 (348)
T PLN02342 232 DAKTVEKARAAGISKIEITNDPAEAVKGADVVYTDVWASMGQKEEAEKRKKAFQGFQVNEALMKLAGPQAYFMHCLPAER 311 (348)
T ss_pred CHHHHHHHHHhCCCcEEEEcCHHHHhCCCCEEEECCccccccchhhHHHHHhccCCccCHHHHhccCCCcEEeCCCCcCC
Confidence 11233333 34 457899999999998753 21 235788888999999999888876
Q ss_pred Ccccchhhh
Q psy15208 900 DNEIEVEKL 908 (1027)
Q Consensus 900 d~eid~~~l 908 (1027)
+.||+-+.+
T Consensus 312 g~EIs~eV~ 320 (348)
T PLN02342 312 GVEVTDGVM 320 (348)
T ss_pred CceecHHHh
Confidence 347775533
No 394
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=96.67 E-value=0.0073 Score=68.80 Aligned_cols=93 Identities=18% Similarity=0.174 Sum_probs=73.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH------HHhccCCEEEecCCCcccCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME------YAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~------e~l~~aDvvi~atG~~~vi~ 880 (1027)
..|.+|+|.|.|.+|+.+++.++.+|++|++++.++.+...+...|++ +.+.. ..-...|++++++|... ..
T Consensus 168 ~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~~~-~~ 246 (337)
T cd05283 168 GPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASH-DL 246 (337)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCCceEEEECCCCcc-hH
Confidence 578999999999999999999999999999998888777777777764 32211 11235799999998764 34
Q ss_pred HHHHhcCCCCeEEEEecCCCc
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~ 901 (1027)
.+.++.+++++.++++|..+.
T Consensus 247 ~~~~~~l~~~G~~v~~g~~~~ 267 (337)
T cd05283 247 DPYLSLLKPGGTLVLVGAPEE 267 (337)
T ss_pred HHHHHHhcCCCEEEEEeccCC
Confidence 456899999999999997643
No 395
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=96.66 E-value=0.0043 Score=66.09 Aligned_cols=88 Identities=20% Similarity=0.166 Sum_probs=66.9
Q ss_pred EEEEEcCChhHHHHHHHHHhC--CC-EEEEEcCCchhHHHH-hhcC-cEEcCHHHHhccCCEEEecCCCcccCcHHHHhc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRAL--SA-QVWIIEIDPICALQA-AMEG-FLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRD 886 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~--Ga-~ViV~d~dp~r~~~A-~~~G-~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~ 886 (1027)
+|+++|||.||+.+....+.- .. .|.|+|+++.++..+ .+.+ -.+.++++.+.+.|++++|.+... +..-..+.
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s~ide~~~~~DlvVEaAS~~A-v~e~~~~~ 80 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVSDIDELIAEVDLVVEAASPEA-VREYVPKI 80 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCccccHHHHhhccceeeeeCCHHH-HHHHhHHH
Confidence 689999999999999999863 45 489999999776642 2333 346789999999999999987654 44444566
Q ss_pred CCC--CeEEEEecCCC
Q psy15208 887 MKD--QAIVCNIGHFD 900 (1027)
Q Consensus 887 mk~--gailvNvG~~d 900 (1027)
||. ..+++.+|-+.
T Consensus 81 L~~g~d~iV~SVGALa 96 (255)
T COG1712 81 LKAGIDVIVMSVGALA 96 (255)
T ss_pred HhcCCCEEEEechhcc
Confidence 766 47788888874
No 396
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=96.66 E-value=0.27 Score=56.53 Aligned_cols=128 Identities=16% Similarity=0.066 Sum_probs=83.4
Q ss_pred HHHHHHcCCCccceEeecccccccccccchhhhhhHHHH--Hhhh-cCccccCCEEEEEcCC--hhHHHHHHHHHhCCCE
Q psy15208 761 LRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRA-TDVMIAGKIAVIIGYG--DVGKGSAQAMRALSAQ 835 (1027)
Q Consensus 761 l~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~-t~~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ 835 (1027)
++.+++ ...+||||..+ ..-| .-|.+.|- +.+. .+ .+.|++|+++|-+ ++.+..+..+..+|++
T Consensus 114 ~~~~a~--~s~vPVINa~~-~~~H-------PtQaL~Dl~Ti~e~~~g-~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~ 182 (332)
T PRK04284 114 VETLAE--YSGVPVWNGLT-DEDH-------PTQVLADFLTAKEHLKK-PYKDIKFTYVGDGRNNVANALMQGAAIMGMD 182 (332)
T ss_pred HHHHHH--hCCCCEEECCC-CCCC-------hHHHHHHHHHHHHHhcC-CcCCcEEEEecCCCcchHHHHHHHHHHcCCE
Confidence 344443 36799998533 1111 23555443 3333 24 4789999999986 6889999999999999
Q ss_pred EEEEcCC---chh--H----HHHhhcCcE---EcCHHHHhccCCEEEecC----C-------------CcccCcHHHHhc
Q psy15208 836 VWIIEID---PIC--A----LQAAMEGFL---VVTMEYAKKYGDIFVTCT----G-------------NYHVITHDHMRD 886 (1027)
Q Consensus 836 ViV~d~d---p~r--~----~~A~~~G~~---v~~~~e~l~~aDvvi~at----G-------------~~~vi~~~~~~~ 886 (1027)
|.++-+. |.. . ..+...|.. ..+++++++++|+|.+.+ | ..--++.+.++.
T Consensus 183 v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~~y~v~~e~l~~ 262 (332)
T PRK04284 183 FHLVCPKELNPDDELLNKCKEIAAETGGKITITDDIDEGVKGSDVIYTDVWVSMGEPDEVWEERIKLLKPYQVNKEMMKK 262 (332)
T ss_pred EEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEECCcccCccchhhHHHHHHhccCCcCCHHHHhh
Confidence 9987332 111 1 113345633 457999999999998742 1 123467777888
Q ss_pred CC-CCeEEEEecCC
Q psy15208 887 MK-DQAIVCNIGHF 899 (1027)
Q Consensus 887 mk-~gailvNvG~~ 899 (1027)
+| +++++...+..
T Consensus 263 a~~~~~ivmHplP~ 276 (332)
T PRK04284 263 TGNPNAIFEHCLPS 276 (332)
T ss_pred cCCCCcEEECCCCC
Confidence 86 58998888774
No 397
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=96.66 E-value=0.0054 Score=72.41 Aligned_cols=89 Identities=20% Similarity=0.216 Sum_probs=66.5
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-------------------cC-cEE-cCHHHHhccCCEEE
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-------------------EG-FLV-VTMEYAKKYGDIFV 870 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-------------------~G-~~v-~~~~e~l~~aDvvi 870 (1027)
+|+|+|.|.+|..+|..++..|.+|+++|+++.+...... .| +.. .+..+++.++|+||
T Consensus 2 kI~vIGlG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advvi 81 (411)
T TIGR03026 2 KIAVIGLGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVII 81 (411)
T ss_pred EEEEECCCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEEE
Confidence 6999999999999999999999999999999866543221 24 332 35677889999999
Q ss_pred ecCCCcc----------cCc--HHHHhcCCCCeEEEEecCCC
Q psy15208 871 TCTGNYH----------VIT--HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 871 ~atG~~~----------vi~--~~~~~~mk~gailvNvG~~d 900 (1027)
.|.+++. +.. ....+.+++|.++++.+..+
T Consensus 82 i~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~ 123 (411)
T TIGR03026 82 ICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVP 123 (411)
T ss_pred EEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcCC
Confidence 9988753 111 22245679999999987653
No 398
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.66 E-value=0.0058 Score=65.85 Aligned_cols=20 Identities=20% Similarity=0.253 Sum_probs=16.7
Q ss_pred CcEEEEEechhHHHHHHHHH
Q psy15208 107 LPIILAGFSFGTFVQAKLQK 126 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~ 126 (1027)
.++.++||||||.++-.+..
T Consensus 78 ~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccceEEEecccHHHHHHHHH
Confidence 47999999999999865554
No 399
>PRK07589 ornithine cyclodeaminase; Validated
Probab=96.65 E-value=0.011 Score=68.25 Aligned_cols=98 Identities=23% Similarity=0.326 Sum_probs=73.1
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHH-H---hhcCcE---EcCHHHHhccCCEEEecCCCc---
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQ-A---AMEGFL---VVTMEYAKKYGDIFVTCTGNY--- 876 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~-A---~~~G~~---v~~~~e~l~~aDvvi~atG~~--- 876 (1027)
.-++++|+|+|..++..++.+.. +.. +|.|+++++.++.. + ...|++ +.+.++++.++|||++||.++
T Consensus 128 da~~l~iiGaG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~~ 207 (346)
T PRK07589 128 DSRTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTNA 207 (346)
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCCC
Confidence 35899999999999988766554 445 79999999977553 1 112443 346899999999999999654
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCC---cccchhhhh
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFD---NEIEVEKLK 909 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d---~eid~~~l~ 909 (1027)
.++..+ .+|+|+.+.-+|.+. .|+|-+.+.
T Consensus 208 Pvl~~~---~lkpG~hV~aIGs~~p~~~Eld~~~l~ 240 (346)
T PRK07589 208 TILTDD---MVEPGMHINAVGGDCPGKTELHPDILR 240 (346)
T ss_pred ceecHH---HcCCCcEEEecCCCCCCcccCCHHHHh
Confidence 556654 579999999999862 577766443
No 400
>KOG3101|consensus
Probab=96.64 E-value=0.002 Score=67.62 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=72.4
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcC--CCC---CCCC-CCCCCc---
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNF--RGV---GASS-GTYDSG--- 86 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dl--rGh---G~S~-g~~~~~--- 86 (1027)
.+..-+|.|+..+++.+-|++.++-|+..+-.++..+ ..+-+.-+.+|+.|+.||- ||. |+++ ..+...
T Consensus 27 ~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~K--sg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 27 SMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEK--SGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred ceEEEEecCCCcccCCcCceEEEecCCcccchhhHhh--hhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 4555677787655556689999999985433332211 1234444568999999996 443 2222 111111
Q ss_pred ------c------chHHHH-HHHHHHHH-HhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 87 ------N------GETDDM-EILLRYIQ-KKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 87 ------~------~~~~Dv-~avl~~L~-~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+ .+.+-+ .++.+.+. ...+. .++.+.||||||.=|+-.+.+.|. +.+.+-+.+|-
T Consensus 105 YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~--kykSvSAFAPI 175 (283)
T KOG3101|consen 105 YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPS--KYKSVSAFAPI 175 (283)
T ss_pred EEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcc--cccceeccccc
Confidence 1 111111 22333332 12222 248999999999999999999887 56666666653
No 401
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=96.64 E-value=0.0051 Score=70.14 Aligned_cols=92 Identities=21% Similarity=0.238 Sum_probs=71.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HH---HHh--ccCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----ME---YAK--KYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~---e~l--~~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|.+ +++ .. +.. ...|+++++.|.
T Consensus 162 ~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~ 241 (341)
T cd05281 162 VSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGN 241 (341)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCEEEECCCC
Confidence 479999999999999999999999999 798887777777777777764 222 11 111 247999999987
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.+.+. +.++.|++++.++.+|..+
T Consensus 242 ~~~~~-~~~~~l~~~G~~v~~g~~~ 265 (341)
T cd05281 242 PKAIE-QGLKALTPGGRVSILGLPP 265 (341)
T ss_pred HHHHH-HHHHHhccCCEEEEEccCC
Confidence 66444 5588999999999998754
No 402
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=96.64 E-value=0.0076 Score=69.66 Aligned_cols=91 Identities=19% Similarity=0.169 Sum_probs=72.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh-----ccCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAK-----KYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l-----~~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.+|..+++.++++|+ +|++++.++.+...+...|++ +++ ..+.+ ...|++++++|.
T Consensus 185 ~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~ 264 (365)
T cd08278 185 RPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGV 264 (365)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCC
Confidence 468999999999999999999999999 599999998888777777764 222 22222 247999999987
Q ss_pred cccCcHHHHhcCCCCeEEEEecCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
...+. ..++.|++++.++.+|..
T Consensus 265 ~~~~~-~~~~~l~~~G~~v~~g~~ 287 (365)
T cd08278 265 PAVIE-QAVDALAPRGTLALVGAP 287 (365)
T ss_pred cHHHH-HHHHHhccCCEEEEeCcC
Confidence 65444 558999999999999865
No 403
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.64 E-value=0.0071 Score=72.76 Aligned_cols=82 Identities=18% Similarity=0.202 Sum_probs=60.4
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-hhcCcEEcCHHHH--hccCCEEE
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-AMEGFLVVTMEYA--KKYGDIFV 870 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-~~~G~~v~~~~e~--l~~aDvvi 870 (1027)
.|++..+.+. +..+.+++++|+|+|.+|+.++..+...|++|+++++++.+.... ...+....+.++. +.++|+||
T Consensus 317 ~G~~~~l~~~-~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~~~~~~~~~l~~~DiVI 395 (477)
T PRK09310 317 EGLFSLLKQK-NIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKAFPLESLPELHRIDIII 395 (477)
T ss_pred HHHHHHHHhc-CCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccceechhHhcccCCCCEEE
Confidence 5666666543 556889999999999999999999999999999999887665432 2223233333332 56899999
Q ss_pred ecCCCc
Q psy15208 871 TCTGNY 876 (1027)
Q Consensus 871 ~atG~~ 876 (1027)
+||+..
T Consensus 396 natP~g 401 (477)
T PRK09310 396 NCLPPS 401 (477)
T ss_pred EcCCCC
Confidence 998653
No 404
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=96.63 E-value=0.0033 Score=70.89 Aligned_cols=93 Identities=20% Similarity=0.223 Sum_probs=71.8
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHH---Hh--ccCCEEEecCCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEY---AK--KYGDIFVTCTGN 875 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e---~l--~~aDvvi~atG~ 875 (1027)
...|.+|+|.|.|.+|+.+++.++.+|++|++++.++.+...+...|.+ +.+ ..+ .. ...|+++++.|.
T Consensus 163 ~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~ 242 (338)
T cd08254 163 VKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGT 242 (338)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCC
Confidence 3578999999999999999999999999999999888777666666653 221 111 11 247999999986
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...+. +.++.|+++|.++.+|...
T Consensus 243 ~~~~~-~~~~~l~~~G~~v~~g~~~ 266 (338)
T cd08254 243 QPTFE-DAQKAVKPGGRIVVVGLGR 266 (338)
T ss_pred HHHHH-HHHHHhhcCCEEEEECCCC
Confidence 65444 4589999999999998754
No 405
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=96.63 E-value=0.009 Score=67.57 Aligned_cols=89 Identities=16% Similarity=0.044 Sum_probs=69.8
Q ss_pred cCCEEEEE--cCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------ccCCEEEecCC
Q psy15208 809 AGKIAVII--GYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------KYGDIFVTCTG 874 (1027)
Q Consensus 809 ~Gk~VvVi--G~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------~~aDvvi~atG 874 (1027)
.+.+++|+ |.|.+|..+++.++.+|++|++++.++.+...+...|++ +.+ ..+.+ ...|++++++|
T Consensus 142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g 221 (324)
T cd08291 142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVG 221 (324)
T ss_pred CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCC
Confidence 56666664 889999999999999999999999888888888888875 221 21221 14799999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
...+ ...+..++++|.++.+|..
T Consensus 222 ~~~~--~~~~~~l~~~G~~v~~g~~ 244 (324)
T cd08291 222 GGLT--GQILLAMPYGSTLYVYGYL 244 (324)
T ss_pred cHHH--HHHHHhhCCCCEEEEEEec
Confidence 7653 3458899999999999865
No 406
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.63 E-value=0.0069 Score=73.12 Aligned_cols=69 Identities=20% Similarity=0.220 Sum_probs=55.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC---HHHHhccCCEEEecCCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT---MEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~---~~e~l~~aDvvi~atG~~ 876 (1027)
+.|++|+|+|+|.+|+++++.|+..|++|+++|..+.+...+...|+.+.. ..+.+.++|+||.++|-+
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~ 81 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFR 81 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCC
Confidence 579999999999999999999999999999999876655445556876543 234567899999988754
No 407
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.62 E-value=0.0075 Score=68.37 Aligned_cols=66 Identities=21% Similarity=0.196 Sum_probs=52.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-----------hhcCc-------------E-EcCHHHHhcc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-----------AMEGF-------------L-VVTMEYAKKY 865 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-----------~~~G~-------------~-v~~~~e~l~~ 865 (1027)
++|+|+|.|.+|.++|..++..|.+|+++|+++.....+ ...|. + +.++.+++.+
T Consensus 3 ~~V~VIG~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~~ 82 (308)
T PRK06129 3 GSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVAD 82 (308)
T ss_pred cEEEEECccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhCC
Confidence 479999999999999999999999999999998654432 12342 3 4467788899
Q ss_pred CCEEEecCCCc
Q psy15208 866 GDIFVTCTGNY 876 (1027)
Q Consensus 866 aDvvi~atG~~ 876 (1027)
+|+|++++...
T Consensus 83 ad~Vi~avpe~ 93 (308)
T PRK06129 83 ADYVQESAPEN 93 (308)
T ss_pred CCEEEECCcCC
Confidence 99999998654
No 408
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.61 E-value=0.0061 Score=70.08 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=69.2
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcE---EEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYI---SIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~---Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.-+++++||+....+ .|..+...+...|+. ++.+++++- .... +.......+.+.++......+..++
T Consensus 59 ~~pivlVhG~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~---~~~~~~~ql~~~V~~~l~~~ga~~v 129 (336)
T COG1075 59 KEPIVLVHGLGGGYG-----NFLPLDYRLAILGWLTNGVYAFELSGG-DGTY---SLAVRGEQLFAYVDEVLAKTGAKKV 129 (336)
T ss_pred CceEEEEccCcCCcc-----hhhhhhhhhcchHHHhccccccccccc-CCCc---cccccHHHHHHHHHHHHhhcCCCce
Confidence 346799999733222 255566667777777 888888865 1111 1112334444444444444455689
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.|+||||||.++..++...+...+++.++.++++-.
T Consensus 130 ~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 130 NLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred EEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 999999999999999999884347999999997643
No 409
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=96.61 E-value=0.0075 Score=69.96 Aligned_cols=91 Identities=20% Similarity=0.203 Sum_probs=70.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcC-----HHHHh-----ccCCEEEecCCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVT-----MEYAK-----KYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~-----~~e~l-----~~aDvvi~atG~~ 876 (1027)
..|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+...+ ..+.+ ...|++++++|..
T Consensus 175 ~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~ 254 (375)
T cd08282 175 QPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDFSDGDPVEQILGLEPGGVDRAVDCVGYE 254 (375)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCeEeccCcccHHHHHHHhhCCCCCEEEECCCCc
Confidence 479999999999999999999999998 799999988888877778864321 11111 1479999999865
Q ss_pred c-----------cCcHHHHhcCCCCeEEEEecCC
Q psy15208 877 H-----------VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ~-----------vi~~~~~~~mk~gailvNvG~~ 899 (1027)
. .++ +.++.+++++.++.+|..
T Consensus 255 ~~~~~~~~~~~~~~~-~~~~~l~~~g~~~~~g~~ 287 (375)
T cd08282 255 ARDRGGEAQPNLVLN-QLIRVTRPGGGIGIVGVY 287 (375)
T ss_pred ccccccccchHHHHH-HHHHHhhcCcEEEEEecc
Confidence 2 133 458889999999988875
No 410
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=96.60 E-value=0.004 Score=70.76 Aligned_cols=91 Identities=19% Similarity=0.266 Sum_probs=70.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCHH------H------Hh--ccCCEEEe
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTME------Y------AK--KYGDIFVT 871 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~~------e------~l--~~aDvvi~ 871 (1027)
-.|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|.+ +.+.. + .. ...|++++
T Consensus 160 ~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid 239 (341)
T cd08262 160 TPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFE 239 (341)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEE
Confidence 4789999999999999999999999996 77788788777777777764 33211 1 11 23799999
Q ss_pred cCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 872 CTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 872 atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+.|+...+. +.++.+++++.++++|..
T Consensus 240 ~~g~~~~~~-~~~~~l~~~g~~v~~g~~ 266 (341)
T cd08262 240 CVGAPGLIQ-QIIEGAPPGGRIVVVGVC 266 (341)
T ss_pred CCCCHHHHH-HHHHHhccCCEEEEECCC
Confidence 998753333 458889999999999875
No 411
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=96.60 E-value=0.0054 Score=68.99 Aligned_cols=89 Identities=16% Similarity=0.028 Sum_probs=70.7
Q ss_pred cCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH----HHh-----ccCCEEEecCCCcc
Q psy15208 809 AGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME----YAK-----KYGDIFVTCTGNYH 877 (1027)
Q Consensus 809 ~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~----e~l-----~~aDvvi~atG~~~ 877 (1027)
.|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|++ +.+.. +.+ ...|++++++|...
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 225 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKT 225 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHH
Confidence 4789999999 9999999999999999999998888887777777763 33211 111 23799999998753
Q ss_pred cCcHHHHhcCCCCeEEEEecCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+ ...++.|+++|.++.+|..
T Consensus 226 -~-~~~~~~l~~~G~~i~~g~~ 245 (326)
T cd08289 226 -L-AYLLSTLQYGGSVAVSGLT 245 (326)
T ss_pred -H-HHHHHHhhcCCEEEEEeec
Confidence 3 3568999999999999975
No 412
>PLN02858 fructose-bisphosphate aldolase
Probab=96.59 E-value=0.006 Score=81.62 Aligned_cols=92 Identities=11% Similarity=0.029 Sum_probs=76.0
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCcH------
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITH------ 881 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~------ 881 (1027)
.+++|++||.|.+|..+|+.|...|..|.|+|+++.+.......|..+ .++.++...+|+||++..+...+..
T Consensus 3 ~~~~IGfIGLG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~~ 82 (1378)
T PLN02858 3 SAGVVGFVGLDSLSFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGDE 82 (1378)
T ss_pred CCCeEEEEchhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhchh
Confidence 467899999999999999999999999999999998888777788874 4688888899999998766543221
Q ss_pred HHHhcCCCCeEEEEecCCC
Q psy15208 882 DHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d 900 (1027)
..++.+++|.++++++..+
T Consensus 83 g~~~~l~~g~iivd~STi~ 101 (1378)
T PLN02858 83 GAAKGLQKGAVILIRSTIL 101 (1378)
T ss_pred hHHhcCCCcCEEEECCCCC
Confidence 2356689999999998764
No 413
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.57 E-value=0.0047 Score=72.00 Aligned_cols=80 Identities=20% Similarity=0.234 Sum_probs=63.8
Q ss_pred cCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcc---cCcHHHH
Q psy15208 809 AGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYH---VITHDHM 884 (1027)
Q Consensus 809 ~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~---vi~~~~~ 884 (1027)
..++|+|+| .|.+|..+|+.++..|-.|+++|+++. .+.++++.++|+||.|++... ++. + +
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~------------~~~~~~~~~aDlVilavP~~~~~~~~~-~-l 162 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW------------DRAEDILADAGMVIVSVPIHLTEEVIA-R-L 162 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc------------hhHHHHHhcCCEEEEeCcHHHHHHHHH-H-H
Confidence 458999999 999999999999999999999998652 245677889999999987543 221 2 4
Q ss_pred hcCCCCeEEEEecCCCcc
Q psy15208 885 RDMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d~e 902 (1027)
..+++|++++.+|.....
T Consensus 163 ~~l~~~~iv~Dv~SvK~~ 180 (374)
T PRK11199 163 PPLPEDCILVDLTSVKNA 180 (374)
T ss_pred hCCCCCcEEEECCCccHH
Confidence 448999999999997543
No 414
>PLN02858 fructose-bisphosphate aldolase
Probab=96.57 E-value=0.0062 Score=81.46 Aligned_cols=92 Identities=17% Similarity=0.090 Sum_probs=75.1
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCCcc----cC--cH
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGNYH----VI--TH 881 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~----vi--~~ 881 (1027)
..++|++||.|.+|..+|..|...|.+|+++|+++.+.......|.. ..+..+++..+|+|+.+..+.. ++ ..
T Consensus 323 ~~~~IGfIGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~ 402 (1378)
T PLN02858 323 PVKRIGFIGLGAMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDL 402 (1378)
T ss_pred CCCeEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchh
Confidence 36789999999999999999999999999999999877766666765 4578888999999999887653 32 12
Q ss_pred HHHhcCCCCeEEEEecCCC
Q psy15208 882 DHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d 900 (1027)
..++.+++|.++++.+..+
T Consensus 403 g~~~~l~~g~ivVd~STvs 421 (1378)
T PLN02858 403 GAVSALPAGASIVLSSTVS 421 (1378)
T ss_pred hHHhcCCCCCEEEECCCCC
Confidence 3467789999999998754
No 415
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.57 E-value=0.012 Score=67.38 Aligned_cols=98 Identities=21% Similarity=0.175 Sum_probs=72.9
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHhh-----cCcE---EcCHHHHhccCCEEEecCCCc-c
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAAM-----EGFL---VVTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~~-----~G~~---v~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
..++++|+|+|..|+..+..+.. .+. +|.++++++.++..... .|+. ..++++++.++|+|++||+.. .
T Consensus 131 ~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~~p 210 (330)
T PRK08291 131 DASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSEEP 210 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCCCc
Confidence 46899999999999999888875 565 79999999877654221 2555 346788899999999998765 4
Q ss_pred cCcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
++..+ .+++|..+.-+|.. ..|+|.+.+.
T Consensus 211 ~i~~~---~l~~g~~v~~vg~d~~~~rEld~~~l~ 242 (330)
T PRK08291 211 ILKAE---WLHPGLHVTAMGSDAEHKNEIAPAVFA 242 (330)
T ss_pred EecHH---HcCCCceEEeeCCCCCCcccCCHHHHh
Confidence 55544 47888888777775 3577766544
No 416
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.55 E-value=0.0049 Score=73.60 Aligned_cols=169 Identities=14% Similarity=0.077 Sum_probs=119.1
Q ss_pred CceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 3 m~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
+..++.+..+.|| +|++++.. ++.+.. +.|++|+--|+ +.-+. ...|......+.++|...+..+.||=|+-..
T Consensus 392 ~~veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGG--F~vsl-tP~fs~~~~~WLerGg~~v~ANIRGGGEfGp 466 (648)
T COG1505 392 YEVEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGG--FNISL-TPRFSGSRKLWLERGGVFVLANIRGGGEFGP 466 (648)
T ss_pred ceEEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccc--ccccc-CCccchhhHHHHhcCCeEEEEecccCCccCH
Confidence 4566777888899 78887766 442222 67885555543 22222 2345444477778899999999999887553
Q ss_pred CC------CCccchHHHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC--------
Q psy15208 82 TY------DSGNGETDDMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-------- 145 (1027)
Q Consensus 82 ~~------~~~~~~~~Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-------- 145 (1027)
.+ .+-+...+|..++.+.|..+.-.. ++.+.|-|-||.+.-...-++|+ .+.++|+--|...
T Consensus 467 ~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPe--lfgA~v~evPllDMlRYh~l~ 544 (648)
T COG1505 467 EWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPE--LFGAAVCEVPLLDMLRYHLLT 544 (648)
T ss_pred HHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChh--hhCceeeccchhhhhhhcccc
Confidence 21 223457899999999998874332 49999999999999888889999 6777777766422
Q ss_pred ---cC--------------------CCCC-----CCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 146 ---KW--------------------LIPE-----VPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 146 ---~~--------------------~l~~-----i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
.| ++.+ -..|+||-.+..|+-|.|.+++.++.+
T Consensus 545 aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~ 605 (648)
T COG1505 545 AGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAK 605 (648)
T ss_pred cchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHH
Confidence 12 1222 237899999999999999999877654
No 417
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=96.55 E-value=0.0091 Score=72.23 Aligned_cols=88 Identities=16% Similarity=0.138 Sum_probs=62.6
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-------------------hcC-cE-EcCHHHHhccCCEE
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-------------------MEG-FL-VVTMEYAKKYGDIF 869 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-------------------~~G-~~-v~~~~e~l~~aDvv 869 (1027)
++|+|||.|.+|.++|..+...|.+|+++|+++.+..... ..| +. ..++++++.++|+|
T Consensus 5 ~kIavIG~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~V 84 (495)
T PRK07531 5 MKAACIGGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADWI 84 (495)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCEE
Confidence 5899999999999999999999999999999986643311 112 33 34677889999999
Q ss_pred EecCCCcccCcHHH---H-hcCCCCeEEEEecC
Q psy15208 870 VTCTGNYHVITHDH---M-RDMKDQAIVCNIGH 898 (1027)
Q Consensus 870 i~atG~~~vi~~~~---~-~~mk~gailvNvG~ 898 (1027)
+++.....-+.... + +.++++++|+....
T Consensus 85 ieavpe~~~vk~~l~~~l~~~~~~~~iI~SsTs 117 (495)
T PRK07531 85 QESVPERLDLKRRVLAEIDAAARPDALIGSSTS 117 (495)
T ss_pred EEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCC
Confidence 99986552122222 2 34677776654443
No 418
>KOG2237|consensus
Probab=96.54 E-value=0.0035 Score=75.09 Aligned_cols=169 Identities=14% Similarity=0.176 Sum_probs=112.9
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+++++++.|| .++..+..-+.....+++|.+|+.||. ++-+.. ..|+.--..|.++|+-....|.||=|.-...
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGa--y~isl~-p~f~~srl~lld~G~Vla~a~VRGGGe~G~~ 516 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGA--YGISLD-PSFRASRLSLLDRGWVLAYANVRGGGEYGEQ 516 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecc--cceeec-cccccceeEEEecceEEEEEeeccCcccccc
Confidence 456788999999 566655443322223578986666663 333332 3454433445668998888999998765533
Q ss_pred CC------CccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC---------
Q psy15208 83 YD------SGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK--------- 145 (1027)
Q Consensus 83 ~~------~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~--------- 145 (1027)
+. .-++..+|..+.+++|.... ...+..+.|.|.||.++-.+..++|+ .+.++|+--|...
T Consensus 517 WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd--LF~avia~VpfmDvL~t~~~ti 594 (712)
T KOG2237|consen 517 WHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD--LFGAVIAKVPFMDVLNTHKDTI 594 (712)
T ss_pred hhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch--HhhhhhhcCcceehhhhhccCc
Confidence 21 12457899999999998752 23369999999999999999999999 7788887776432
Q ss_pred --cC--------------------CCC---CC-----CCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 146 --KW--------------------LIP---EV-----PKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 146 --~~--------------------~l~---~i-----~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
-| .+. ++ ...+|+..+..|+-|++.++..|..
T Consensus 595 lplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vA 656 (712)
T KOG2237|consen 595 LPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVA 656 (712)
T ss_pred cccchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHH
Confidence 11 011 11 2457888999988888777665554
No 419
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.54 E-value=0.0066 Score=67.72 Aligned_cols=86 Identities=17% Similarity=0.074 Sum_probs=62.6
Q ss_pred CCEEEEEcCChhHHHHHHHHHh--CCCEEE-EEcCCchhHHH-HhhcCc--EEcCHHHHhccCCEEEecCCCcccCcHHH
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRA--LSAQVW-IIEIDPICALQ-AAMEGF--LVVTMEYAKKYGDIFVTCTGNYHVITHDH 883 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~--~Ga~Vi-V~d~dp~r~~~-A~~~G~--~v~~~~e~l~~aDvvi~atG~~~vi~~~~ 883 (1027)
..+|+|+|+|.||+.+++.+.. .+++|. |+|+++.++.. +...|. ...++++++.++|+|+.|+++.. ..+-.
T Consensus 6 ~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eell~~~D~Vvi~tp~~~-h~e~~ 84 (271)
T PRK13302 6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQLATHADIVVEAAPASV-LRAIV 84 (271)
T ss_pred eeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHHhcCCCEEEECCCcHH-HHHHH
Confidence 4789999999999999999886 477765 78999877654 334453 24578888889999999998753 23333
Q ss_pred HhcCCCCeEEEEe
Q psy15208 884 MRDMKDQAIVCNI 896 (1027)
Q Consensus 884 ~~~mk~gailvNv 896 (1027)
...++.|.-++..
T Consensus 85 ~~aL~aGk~Vi~~ 97 (271)
T PRK13302 85 EPVLAAGKKAIVL 97 (271)
T ss_pred HHHHHcCCcEEEe
Confidence 4556777655543
No 420
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=96.52 E-value=0.012 Score=66.77 Aligned_cols=93 Identities=19% Similarity=0.193 Sum_probs=71.6
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHHHHhhcCcE-EcC--------HHHHhc--cCCEEEecCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICALQAAMEGFL-VVT--------MEYAKK--YGDIFVTCTG 874 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~A~~~G~~-v~~--------~~e~l~--~aDvvi~atG 874 (1027)
...|++|+|.|.|.+|+.+++.++..| ++|++++.++.+.......|++ +.+ +.+... ..|++++++|
T Consensus 165 ~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~dvvld~~g 244 (340)
T cd05284 165 LDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVG 244 (340)
T ss_pred CCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhCCCCCCEEEEcCC
Confidence 357999999999999999999999999 7999988887776666666753 222 112222 4799999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
....+ .+.++.+++++.++.+|..+
T Consensus 245 ~~~~~-~~~~~~l~~~g~~i~~g~~~ 269 (340)
T cd05284 245 SDETL-ALAAKLLAKGGRYVIVGYGG 269 (340)
T ss_pred CHHHH-HHHHHHhhcCCEEEEEcCCC
Confidence 75433 45589999999999998764
No 421
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=96.51 E-value=0.0076 Score=68.40 Aligned_cols=91 Identities=19% Similarity=0.226 Sum_probs=69.4
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH-----HHh---ccCCEEEecCCCccc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME-----YAK---KYGDIFVTCTGNYHV 878 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~-----e~l---~~aDvvi~atG~~~v 878 (1027)
.|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|.+ +++.+ +.. ...|+++++.|....
T Consensus 165 ~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd~vld~~g~~~~ 244 (339)
T cd08232 165 AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEASGAPAA 244 (339)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCccEEEECCCCHHH
Confidence 89999999999999999999999999 799998877666555666653 33221 222 137999999986443
Q ss_pred CcHHHHhcCCCCeEEEEecCCC
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d 900 (1027)
+ .+.++.|++++.++++|..+
T Consensus 245 ~-~~~~~~L~~~G~~v~~g~~~ 265 (339)
T cd08232 245 L-ASALRVVRPGGTVVQVGMLG 265 (339)
T ss_pred H-HHHHHHHhcCCEEEEEecCC
Confidence 3 35589999999999998654
No 422
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.51 E-value=0.023 Score=63.23 Aligned_cols=120 Identities=18% Similarity=0.279 Sum_probs=85.5
Q ss_pred hhhhhHHHHHh---hhcCccccCCEEEEEcCChhHHHHHHHHHhC----CC-------EEEEEcCC-----------chh
Q psy15208 791 GCRESLIDGIK---RATDVMIAGKIAVIIGYGDVGKGSAQAMRAL----SA-------QVWIIEID-----------PIC 845 (1027)
Q Consensus 791 g~~~s~~~~i~---r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~----Ga-------~ViV~d~d-----------p~r 845 (1027)
||+-....++. +.++..+...+++++|+|.-|.++|+.+... |+ ++.++|.+ +.+
T Consensus 3 GTa~V~lAgllnAlk~~g~~l~d~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~ 82 (279)
T cd05312 3 GTAAVALAGLLAALRITGKPLSDQRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFK 82 (279)
T ss_pred hHHHHHHHHHHHHHHHhCCChhhcEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHH
Confidence 55554444433 3557778999999999999999999999887 87 78888765 222
Q ss_pred HHHHhhcC-cEEcCHHHHhc--cCCEEEecCCCcccCcHHHHhcCC---CCeEEEEecCCCc--ccchhhhhc
Q psy15208 846 ALQAAMEG-FLVVTMEYAKK--YGDIFVTCTGNYHVITHDHMRDMK---DQAIVCNIGHFDN--EIEVEKLKK 910 (1027)
Q Consensus 846 ~~~A~~~G-~~v~~~~e~l~--~aDvvi~atG~~~vi~~~~~~~mk---~gailvNvG~~d~--eid~~~l~~ 910 (1027)
...|.... -...++.|+++ .+|++|-+++..++++++.++.|. +..++.-..-... |+..+...+
T Consensus 83 ~~~a~~~~~~~~~~L~e~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~~E~~pe~a~~ 155 (279)
T cd05312 83 KPFARKDEEKEGKSLLEVVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALSNPTSKAECTAEDAYK 155 (279)
T ss_pred HHHHhhcCcccCCCHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCcCCccccCHHHHHH
Confidence 33343322 13457999998 889999998877899999999998 6666655544433 666555544
No 423
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.50 E-value=0.0078 Score=68.16 Aligned_cols=88 Identities=19% Similarity=0.178 Sum_probs=61.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----cC--------------cE-EcCHHHHhccCCEEE
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----EG--------------FL-VVTMEYAKKYGDIFV 870 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----~G--------------~~-v~~~~e~l~~aDvvi 870 (1027)
++|+|+|.|.+|.++|..+...|.+|+++|+++.+...+.. .| .. ..+.++++.++|+||
T Consensus 5 ~~I~vIGaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlVi 84 (311)
T PRK06130 5 QNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLVI 84 (311)
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEEE
Confidence 68999999999999999999999999999998866543322 12 12 235667788999999
Q ss_pred ecCCCcccCcHHH---Hh-cCCCCeEEE-EecC
Q psy15208 871 TCTGNYHVITHDH---MR-DMKDQAIVC-NIGH 898 (1027)
Q Consensus 871 ~atG~~~vi~~~~---~~-~mk~gailv-NvG~ 898 (1027)
.|+....-+.... ++ .++++++++ |++.
T Consensus 85 ~av~~~~~~~~~v~~~l~~~~~~~~ii~s~tsg 117 (311)
T PRK06130 85 EAVPEKLELKRDVFARLDGLCDPDTIFATNTSG 117 (311)
T ss_pred EeccCcHHHHHHHHHHHHHhCCCCcEEEECCCC
Confidence 9986542112222 32 356676664 4443
No 424
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=96.50 E-value=0.0076 Score=68.10 Aligned_cols=92 Identities=18% Similarity=0.135 Sum_probs=71.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCHHH---------HhccCCEEEecCCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTMEY---------AKKYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~~e---------~l~~aDvvi~atG~~ 876 (1027)
..|++|+|.|.|.+|+.+++.++..|++ |++++.++.+...+...|.. +.+..+ .-...|++++++|..
T Consensus 158 ~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~~ 237 (334)
T cd08234 158 KPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVP 237 (334)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCCh
Confidence 5789999999999999999999999997 88888888777666666663 222111 113589999999865
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.. ..+.++.|++++.++++|..+
T Consensus 238 ~~-~~~~~~~l~~~G~~v~~g~~~ 260 (334)
T cd08234 238 KT-LEQAIEYARRGGTVLVFGVYA 260 (334)
T ss_pred HH-HHHHHHHHhcCCEEEEEecCC
Confidence 43 345588999999999998764
No 425
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=96.49 E-value=0.0087 Score=68.18 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=71.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHHHHhhcCcE-EcCHH-----H----Hh--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICALQAAMEGFL-VVTME-----Y----AK--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~A~~~G~~-v~~~~-----e----~l--~~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|..+++.++.+| .+|++++.++.+...+...|++ +++.. + .. ...|++++++|
T Consensus 165 ~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g 244 (345)
T cd08286 165 KPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVG 244 (345)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCCCCEEEECCC
Confidence 57999999999999999999999999 6899998888777766777764 22211 1 12 24899999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
....+ ...++.+++++.++++|..+
T Consensus 245 ~~~~~-~~~~~~l~~~g~~v~~g~~~ 269 (345)
T cd08286 245 IPATF-ELCQELVAPGGHIANVGVHG 269 (345)
T ss_pred CHHHH-HHHHHhccCCcEEEEecccC
Confidence 76543 34468899999999998653
No 426
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=96.49 E-value=0.0066 Score=76.90 Aligned_cols=92 Identities=21% Similarity=0.225 Sum_probs=70.9
Q ss_pred CEEEEEcCChhHHHHHHHHHhCC--CEEEEEcCCchhHHHHhhcCcE---EcCHHHHhccCCEEEecCCCcccCc--HHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALS--AQVWIIEIDPICALQAAMEGFL---VVTMEYAKKYGDIFVTCTGNYHVIT--HDH 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~G--a~ViV~d~dp~r~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~~~vi~--~~~ 883 (1027)
++|+|+|+|.+|..+|+.++..| .+|+++|+++.+...+...|+. ..+.++++.++|+||.|++...+.. .+.
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l 83 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLAMEKVLADL 83 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHHHHHHHHHH
Confidence 78999999999999999999988 4899999999887777777763 3457778889999999997543111 111
Q ss_pred HhcCCCCeEEEEecCCCcc
Q psy15208 884 MRDMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~e 902 (1027)
-..++++.++++++.....
T Consensus 84 ~~~~~~~~ii~d~~svk~~ 102 (735)
T PRK14806 84 KPLLSEHAIVTDVGSTKGN 102 (735)
T ss_pred HHhcCCCcEEEEcCCCchH
Confidence 2345788899999876533
No 427
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=96.48 E-value=0.0093 Score=69.55 Aligned_cols=90 Identities=19% Similarity=0.081 Sum_probs=70.8
Q ss_pred ccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCH--------------------------
Q psy15208 808 IAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTM-------------------------- 859 (1027)
Q Consensus 808 l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~-------------------------- 859 (1027)
..|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|.+ +++.
T Consensus 192 ~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (393)
T cd08246 192 KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARR 271 (393)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccch
Confidence 57899999997 9999999999999999988888888888888888853 1211
Q ss_pred -HHH----hc---cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 860 -EYA----KK---YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 860 -~e~----l~---~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.+. .. ..|+|++++|.. .+. +.++.|+++++++.+|..
T Consensus 272 ~~~~v~~l~~~~~g~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~ 317 (393)
T cd08246 272 FGKAIWDILGGREDPDIVFEHPGRA-TFP-TSVFVCDRGGMVVICAGT 317 (393)
T ss_pred HHHHHHHHhCCCCCCeEEEECCchH-hHH-HHHHHhccCCEEEEEccc
Confidence 111 11 579999999874 344 468999999999999864
No 428
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=96.46 E-value=0.37 Score=54.80 Aligned_cols=130 Identities=20% Similarity=0.081 Sum_probs=89.0
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhH
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICA 846 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~ 846 (1027)
..+||||..++ .-| .-|.+.|- +.+..+ .+.|.+|+++|- +++-+..+..++.+|++|.++-+.....
T Consensus 115 ~~vPVINa~~~-~~H-------PtQaL~Dl~Ti~e~~g-~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~ 185 (304)
T TIGR00658 115 ASVPVINGLTD-LFH-------PCQALADLLTIIEHFG-KLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVATPEGYEP 185 (304)
T ss_pred CCCCEEECCCC-CCC-------hHHHHHHHHHHHHHhC-CCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEECCchhcC
Confidence 67999998542 222 23555543 333334 379999999998 5588899999999999999984322111
Q ss_pred -----H----HHhhcCcE---EcCHHHHhccCCEEEecC----CC------------cccCcHHHHhcCCCCeEEEEecC
Q psy15208 847 -----L----QAAMEGFL---VVTMEYAKKYGDIFVTCT----GN------------YHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 847 -----~----~A~~~G~~---v~~~~e~l~~aDvvi~at----G~------------~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
. .+...|.. ..+++++++++|||.+-. +. .-.++++.++.+|+++++.-.+.
T Consensus 186 ~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~y~l~~~~l~~~~~~~ivmHplP 265 (304)
T TIGR00658 186 DADIVKKAQEIAKENGGSVELTHDPVEAVKGADVIYTDVWVSMGEEDKKEERLKLFRPYQVNEELMELAKPEVIFMHCLP 265 (304)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcCcccCccccccHHHHHHhcCCcCCHHHHhhcCCCCEEECCCC
Confidence 1 13345643 457899999999998632 11 12688888899999999998887
Q ss_pred C--Ccccchhhh
Q psy15208 899 F--DNEIEVEKL 908 (1027)
Q Consensus 899 ~--d~eid~~~l 908 (1027)
. +.||+-+.+
T Consensus 266 ~~rg~Ei~~~V~ 277 (304)
T TIGR00658 266 AHRGEEVTDEVI 277 (304)
T ss_pred CCCCceeCHHHh
Confidence 6 357776643
No 429
>KOG0067|consensus
Probab=96.45 E-value=0.0028 Score=71.51 Aligned_cols=101 Identities=20% Similarity=0.205 Sum_probs=79.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCC----CcccCcH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTG----NYHVITH 881 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG----~~~vi~~ 881 (1027)
.+.|.+.+++|+|++|+.++.++++||-.|+.+|..-. .-.-..+|.+ |-++.+.+.++|-+..... +.++++.
T Consensus 175 ~~~G~~~g~~g~gr~g~av~~~A~afg~~~ifydp~~~-~g~~~~lg~~rVytlqd~~~~sd~~S~hc~~~~~~h~lin~ 253 (435)
T KOG0067|consen 175 RIRGPTLGLIGFGRTGQAVALRAKAFGFVVIFYDPYLI-DGIDKSLGLQRVYTLQDLLYQSDCVSLHCNLNEHNHELIND 253 (435)
T ss_pred cccccceeeeccccccceehhhhhcccceeeeecchhh-hhhhhhcccceecccchhhhhccceeeecccCccccccccc
Confidence 36899999999999999999999999999999955432 2224456665 5578899999999886542 5578887
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
-.+.+|+.|+.++|+.+. .-+|.+.|.
T Consensus 254 ~tikqm~qGaflvnta~g-glvdekaLa 280 (435)
T KOG0067|consen 254 FTIKQMRQGAFLVNTARG-GLVDEKALA 280 (435)
T ss_pred ccceeecccceEeeeccc-ccCChHHHH
Confidence 779999999999999886 334555554
No 430
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.43 E-value=0.012 Score=66.82 Aligned_cols=86 Identities=13% Similarity=0.096 Sum_probs=63.7
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc--------------CcE-EcCHHHHhccCCEEEecCCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME--------------GFL-VVTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~--------------G~~-v~~~~e~l~~aDvvi~atG~~ 876 (1027)
+|+|+|.|.+|..+|..+...|.+|+++++++....+.... +.. ..+.++++..+|+||.|+...
T Consensus 3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~~ 82 (325)
T PRK00094 3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVPSQ 82 (325)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCCHH
Confidence 69999999999999999999999999999988665544443 233 335667788999999998764
Q ss_pred ccCc--HHHHhcCCCCeEEEEec
Q psy15208 877 HVIT--HDHMRDMKDQAIVCNIG 897 (1027)
Q Consensus 877 ~vi~--~~~~~~mk~gailvNvG 897 (1027)
.+-. .+....++++.+++++.
T Consensus 83 ~~~~v~~~l~~~~~~~~~vi~~~ 105 (325)
T PRK00094 83 ALREVLKQLKPLLPPDAPIVWAT 105 (325)
T ss_pred HHHHHHHHHHhhcCCCCEEEEEe
Confidence 3111 12234467888888873
No 431
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.42 E-value=0.0092 Score=67.67 Aligned_cols=77 Identities=14% Similarity=0.192 Sum_probs=60.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcH--HHHh-
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITH--DHMR- 885 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~--~~~~- 885 (1027)
.+.+|+|+|+|.+|..+|+.+...|.+|.++++++. .++++++.++|+|+.++.... +.. +.+.
T Consensus 3 ~~m~I~iiG~G~~G~~lA~~l~~~G~~V~~~~r~~~------------~~~~~~~~~advvi~~vp~~~-~~~v~~~l~~ 69 (308)
T PRK14619 3 QPKTIAILGAGAWGSTLAGLASANGHRVRVWSRRSG------------LSLAAVLADADVIVSAVSMKG-VRPVAEQVQA 69 (308)
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCEEEEEeCCCC------------CCHHHHHhcCCEEEEECChHH-HHHHHHHHHH
Confidence 457899999999999999999999999999988763 356788889999999887652 111 1233
Q ss_pred -cCCCCeEEEEecC
Q psy15208 886 -DMKDQAIVCNIGH 898 (1027)
Q Consensus 886 -~mk~gailvNvG~ 898 (1027)
.++++.+++++.-
T Consensus 70 ~~~~~~~ivi~~s~ 83 (308)
T PRK14619 70 LNLPPETIIVTATK 83 (308)
T ss_pred hcCCCCcEEEEeCC
Confidence 3678889988753
No 432
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.42 E-value=0.0072 Score=65.57 Aligned_cols=66 Identities=29% Similarity=0.283 Sum_probs=53.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh--cCcEEcC--------HHHH-hccCCEEEecCCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM--EGFLVVT--------MEYA-KKYGDIFVTCTGNY 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~--~G~~v~~--------~~e~-l~~aDvvi~atG~~ 876 (1027)
++++|+|+|.+|+.+|+.|...|..|+++|.|+.+..++.. .+..+.. +.++ +.++|+++-+||+.
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d 77 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGND 77 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCC
Confidence 57999999999999999999999999999999988877333 4444331 3444 45789999999874
No 433
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.39 E-value=0.012 Score=65.32 Aligned_cols=90 Identities=20% Similarity=0.183 Sum_probs=71.6
Q ss_pred cCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-Ec-CHHHHh-ccCCEEEecCCCcccCcHHHH
Q psy15208 809 AGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VV-TMEYAK-KYGDIFVTCTGNYHVITHDHM 884 (1027)
Q Consensus 809 ~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~-~~~e~l-~~aDvvi~atG~~~vi~~~~~ 884 (1027)
.|++|+|.|. |.+|+.+++.++.+|++|+++..++.+...+...|+. +. ..++.. ...|++++++|... + .+.+
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vl~~~g~~~-~-~~~~ 209 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSELSGAPVDLVVDSVGGPQ-L-ARAL 209 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccccccCCCceEEEECCCcHH-H-HHHH
Confidence 5999999999 8999999999999999999998888777777777763 21 212211 25899999998763 3 4569
Q ss_pred hcCCCCeEEEEecCCC
Q psy15208 885 RDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d 900 (1027)
+.|+.+++++++|..+
T Consensus 210 ~~l~~~G~~v~~g~~~ 225 (305)
T cd08270 210 ELLAPGGTVVSVGSSS 225 (305)
T ss_pred HHhcCCCEEEEEeccC
Confidence 9999999999998653
No 434
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=96.38 E-value=0.45 Score=54.01 Aligned_cols=129 Identities=19% Similarity=0.066 Sum_probs=82.9
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCch--
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPI-- 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~-- 844 (1027)
..+||||.-+.. -| .-|.+.|. +.+.-+ .+.|++|+++|-+. +.+..+..+..+|++|.++-+...
T Consensus 114 ~~vPVINa~~~~-~H-------PtQaL~Dl~Ti~e~~g-~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~~~~~ 184 (302)
T PRK14805 114 GSVPVINALCDL-YH-------PCQALADFLTLAEQFG-DVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPPGHFP 184 (302)
T ss_pred CCCCEEECCCCC-CC-------hHHHHHHHHHHHHHhC-CcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCchhcC
Confidence 679999986641 22 23555443 223334 48999999999866 778889999999999999843221
Q ss_pred -hH--H----HHhhcCcEE--cCHHHHhccCCEEEecC----C------------CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 845 -CA--L----QAAMEGFLV--VTMEYAKKYGDIFVTCT----G------------NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 845 -r~--~----~A~~~G~~v--~~~~e~l~~aDvvi~at----G------------~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.. . .+...|..+ .+-.++++.+|||.+.+ | ..--++.+.++.+|+. ++...+..
T Consensus 185 ~~~~~~~a~~~~~~~g~~~~~~~d~~a~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~y~vt~~~l~~a~~~-~vmH~lP~ 263 (302)
T PRK14805 185 DGQIVAEAQELAAKSGGKLVLTSDIEAIEGHDAIYTDTWISMGDDTPLAEIKAKFAPYQVNKALMEKAGAT-FVMHCQPA 263 (302)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEcCHHHHCCCCEEEeeceEeCCCccccHHHHHhccCCcCCHHHHhcCCCC-eEECCCCC
Confidence 11 1 133346552 32246789999998733 1 1135777778888876 77777663
Q ss_pred --Ccccchhhh
Q psy15208 900 --DNEIEVEKL 908 (1027)
Q Consensus 900 --d~eid~~~l 908 (1027)
..||+-+.+
T Consensus 264 ~Rg~Ei~~~V~ 274 (302)
T PRK14805 264 HRGVEITSEVM 274 (302)
T ss_pred CCCCeeCHHHh
Confidence 467765533
No 435
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=96.38 E-value=0.28 Score=56.55 Aligned_cols=131 Identities=15% Similarity=0.018 Sum_probs=85.9
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcC--ccccCCEEEEEcCC-hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATD--VMIAGKIAVIIGYG-DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~--~~l~Gk~VvViG~G-~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
..+||||--+ -.-| .-|++.|- +.+..+ -.+.|.+|+++|-+ ++.+..+..++.+|++|.++-+...
T Consensus 118 ~~vPVINa~~-~~~H-------PtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v~~~~P~~~ 189 (338)
T PRK02255 118 ATVPVINGMS-DYNH-------PTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDFVHFGPKGY 189 (338)
T ss_pred CCCCEEECCC-CCCC-------hHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEEEEECCCcc
Confidence 6799999533 2112 23555543 223222 24789999999985 4888989999999999998843311
Q ss_pred ----h-HHH----HhhcCc--E-EcCHHHHhccCCEEEecC-----CC-------------cccCcHHHHhcCCCCeEEE
Q psy15208 845 ----C-ALQ----AAMEGF--L-VVTMEYAKKYGDIFVTCT-----GN-------------YHVITHDHMRDMKDQAIVC 894 (1027)
Q Consensus 845 ----r-~~~----A~~~G~--~-v~~~~e~l~~aDvvi~at-----G~-------------~~vi~~~~~~~mk~gailv 894 (1027)
. ... +...|. . ..+++++++++|||++.+ +. .--++.+.++.+|+++++.
T Consensus 190 ~~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~w~~~~~~~~~~~~r~~~~~~~y~v~~ell~~a~~~~ivm 269 (338)
T PRK02255 190 QLPEEHLAIAEENCEVSGGSVLVTDDVDEAVKDADFVYTDVWYGLYDAELSEEERMAIFYPKYQVTPELMAKAGPHAKFM 269 (338)
T ss_pred ccCHHHHHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcccHhhccchhhHHHHHHhhCCCceECHHHHhccCCCCEEe
Confidence 1 111 223453 3 457899999999998722 11 1357778788889999998
Q ss_pred EecCC--Ccccchhhh
Q psy15208 895 NIGHF--DNEIEVEKL 908 (1027)
Q Consensus 895 NvG~~--d~eid~~~l 908 (1027)
..+.. ..||+-+.+
T Consensus 270 HpLP~~Rg~Eis~~V~ 285 (338)
T PRK02255 270 HCLPATRGEEVTDEVM 285 (338)
T ss_pred CCCCCcCCceecHHHh
Confidence 88873 567665533
No 436
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=96.38 E-value=0.52 Score=54.20 Aligned_cols=122 Identities=13% Similarity=0.016 Sum_probs=79.9
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcC-ccccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATD-VMIAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~-~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
..+||||.-+ ..-| .-|.+.|. +.+..+ -.+.|.+|+++|-+ .+.+..+..++.+|++|.++-+...
T Consensus 121 ~~vPVINa~~-~~~H-------PtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~ 192 (334)
T PRK12562 121 AGVPVWNGLT-NEFH-------PTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQAC 192 (334)
T ss_pred CCCCEEECCC-CCCC-------hHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCccc
Confidence 6799998743 1111 23555443 222222 23789999999986 5889999999999999998743221
Q ss_pred ---h--H----HHHhhcCcE---EcCHHHHhccCCEEEecC----CC-------------cccCcHHHHhcC-CCCeEEE
Q psy15208 845 ---C--A----LQAAMEGFL---VVTMEYAKKYGDIFVTCT----GN-------------YHVITHDHMRDM-KDQAIVC 894 (1027)
Q Consensus 845 ---r--~----~~A~~~G~~---v~~~~e~l~~aDvvi~at----G~-------------~~vi~~~~~~~m-k~gailv 894 (1027)
. . ..+...|.. ..+++++++++|||.+.. |. .--++.+.++.. |+++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~w~sm~~~~~~~~~~~~~~~~y~v~~ell~~a~~~~~i~m 272 (334)
T PRK12562 193 WPEASLVAECSALAQKHGGKITLTEDIAAGVKGADFIYTDVWVSMGEPKEKWAERIALLRGYQVNSKMMALTGNPQVKFL 272 (334)
T ss_pred CCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcCccccccchhhHHHHHHhccCCcCCHHHHHhhcCCCCEEE
Confidence 1 1 112334543 357999999999998743 21 124566767775 7889888
Q ss_pred EecCC
Q psy15208 895 NIGHF 899 (1027)
Q Consensus 895 NvG~~ 899 (1027)
.++..
T Consensus 273 HcLP~ 277 (334)
T PRK12562 273 HCLPA 277 (334)
T ss_pred CCCCC
Confidence 87765
No 437
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.38 E-value=0.012 Score=65.67 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=69.6
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCC----EEEEEcCCchhHHHHhh-cCcEEc-CHHHHhccCCEEEecCCCcccCc--HH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSA----QVWIIEIDPICALQAAM-EGFLVV-TMEYAKKYGDIFVTCTGNYHVIT--HD 882 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga----~ViV~d~dp~r~~~A~~-~G~~v~-~~~e~l~~aDvvi~atG~~~vi~--~~ 882 (1027)
+++++||+|.+|..++..+...|. +|+++|+++.++..+.. .|+.+. +..+++.++|+||.|+....+.. .+
T Consensus 3 ~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavkP~~~~~vl~~ 82 (272)
T PRK12491 3 KQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIKPDLYSSVINQ 82 (272)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeChHHHHHHHHH
Confidence 479999999999999999998774 69999998877665543 687644 56677889999999986433111 12
Q ss_pred HHhcCCCCeEEEEecCCCcccchhhhhc
Q psy15208 883 HMRDMKDQAIVCNIGHFDNEIEVEKLKK 910 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~eid~~~l~~ 910 (1027)
.-..++++.+++.+-.. ++++.+..
T Consensus 83 l~~~~~~~~lvISi~AG---i~i~~l~~ 107 (272)
T PRK12491 83 IKDQIKNDVIVVTIAAG---KSIKSTEN 107 (272)
T ss_pred HHHhhcCCcEEEEeCCC---CcHHHHHH
Confidence 12335678888888654 45555553
No 438
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.35 E-value=0.0099 Score=69.02 Aligned_cols=87 Identities=15% Similarity=0.148 Sum_probs=65.5
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHh-CCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcc---cCcH
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRA-LSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYH---VITH 881 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~-~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~---vi~~ 881 (1027)
+++-.+|+|||. |-||..+|+.++. .|.+|+.+|++.. ...+.++.+.++|+||-|++... ++.
T Consensus 1 ~~~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~----------~~~~~~~~v~~aDlVilavPv~~~~~~l~- 69 (370)
T PRK08818 1 MIAQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADP----------GSLDPATLLQRADVLIFSAPIRHTAALIE- 69 (370)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCcc----------ccCCHHHHhcCCCEEEEeCCHHHHHHHHH-
Confidence 356789999999 9999999999996 4789999987421 12356778899999999997543 222
Q ss_pred HHHh---cCCCCeEEEEecCCCcccc
Q psy15208 882 DHMR---DMKDQAIVCNIGHFDNEIE 904 (1027)
Q Consensus 882 ~~~~---~mk~gailvNvG~~d~eid 904 (1027)
+... .+++++++..+|....++-
T Consensus 70 ~l~~~~~~l~~~~iVtDVgSvK~~i~ 95 (370)
T PRK08818 70 EYVALAGGRAAGQLWLDVTSIKQAPV 95 (370)
T ss_pred HHhhhhcCCCCCeEEEECCCCcHHHH
Confidence 1112 2799999999999876543
No 439
>PRK10637 cysG siroheme synthase; Provisional
Probab=96.35 E-value=0.0091 Score=71.49 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=65.9
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcC--CchhHHHHhhcCcEEcC---HHHHhccCCEEEecCCCcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEI--DPICALQAAMEGFLVVT---MEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~--dp~r~~~A~~~G~~v~~---~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
+.+.||+|+|+|.|.++..=++.+..+||+|+|+-. ++.-...+....++... ..+.+..+++||.||+++. ++
T Consensus 8 ~~l~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~-~n 86 (457)
T PRK10637 8 CQLRDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDA-VN 86 (457)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHH-Hh
Confidence 458999999999999999988999999999999833 22211112222233222 3455778999999998876 77
Q ss_pred HHHHhcCCCCeEEEEecC
Q psy15208 881 HDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~ 898 (1027)
.+..+..+..++++|+.-
T Consensus 87 ~~i~~~a~~~~~lvN~~d 104 (457)
T PRK10637 87 QRVSEAAEARRIFCNVVD 104 (457)
T ss_pred HHHHHHHHHcCcEEEECC
Confidence 776666677788888753
No 440
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.35 E-value=0.012 Score=66.02 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=70.3
Q ss_pred hhHHHHHhhh-cCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHh-hcCc-----EEcCHHHH--h
Q psy15208 794 ESLIDGIKRA-TDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAA-MEGF-----LVVTMEYA--K 863 (1027)
Q Consensus 794 ~s~~~~i~r~-t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~-~~G~-----~v~~~~e~--l 863 (1027)
.++...+.+. .+....|++|+|+|+|..+++++..|+..|+ +|+|+++++.|+.+.. ..+- ......+. .
T Consensus 109 ~G~~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~ 188 (283)
T COG0169 109 IGFLRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGL 188 (283)
T ss_pred HHHHHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccc
Confidence 5677777763 3356689999999999999999999999996 8999999998866532 2221 11222222 2
Q ss_pred ccCCEEEecCCCc--c-----cCcHHHHhcCCCCeEEEEecCC
Q psy15208 864 KYGDIFVTCTGNY--H-----VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 864 ~~aDvvi~atG~~--~-----vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.++|+||+||+.- . .+. .+.++++.++..+=..
T Consensus 189 ~~~dliINaTp~Gm~~~~~~~~~~---~~~l~~~~~v~D~vY~ 228 (283)
T COG0169 189 EEADLLINATPVGMAGPEGDSPVP---AELLPKGAIVYDVVYN 228 (283)
T ss_pred cccCEEEECCCCCCCCCCCCCCCc---HHhcCcCCEEEEeccC
Confidence 2699999998421 1 222 4557778887766444
No 441
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.34 E-value=0.044 Score=65.11 Aligned_cols=107 Identities=21% Similarity=0.320 Sum_probs=68.2
Q ss_pred ccEEEEECCCCCCCCCCChH-HHHHHHHHHHh-CCcEEEEEcCCCCCCCCCC---------CCCccchHHHHHHHHHHHH
Q psy15208 33 KGVVLIAHPHPLFGGTMDNK-VVQTLVRVMLS-LGYISIRMNFRGVGASSGT---------YDSGNGETDDMEILLRYIQ 101 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~-~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~---------~~~~~~~~~Dv~avl~~L~ 101 (1027)
.|++|++-|= +..+.. ....+...|++ .|-.+++++.|-+|.|... +-+.+..+.|+..++++++
T Consensus 29 gpifl~~ggE----~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~ 104 (434)
T PF05577_consen 29 GPIFLYIGGE----GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVK 104 (434)
T ss_dssp SEEEEEE--S----S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC----CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHH
Confidence 6777777552 222211 11123333333 3778999999999999742 1234567999999999999
Q ss_pred HhC---CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 102 KKY---PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 102 ~~~---~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.++ +..|++++|-|+||++|..+-.+||+ .+.|.++.++++.
T Consensus 105 ~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--~~~ga~ASSapv~ 149 (434)
T PF05577_consen 105 KKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH--LFDGAWASSAPVQ 149 (434)
T ss_dssp HHTTTGCC--EEEEEETHHHHHHHHHHHH-TT--T-SEEEEET--CC
T ss_pred HhhcCCCCCCEEEECCcchhHHHHHHHhhCCC--eeEEEEeccceee
Confidence 765 34589999999999999999999999 7899999988764
No 442
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=96.33 E-value=0.018 Score=65.73 Aligned_cols=99 Identities=25% Similarity=0.269 Sum_probs=75.9
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHh----hc-Cc---EEcCHHHHhccCCEEEecCCCc-c
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAA----ME-GF---LVVTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~----~~-G~---~v~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
.-++++|||+|..++..++.++. ++. +|.|+++++..+.... .. +. .+.+.++++..||||++||.++ .
T Consensus 129 da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~P 208 (330)
T COG2423 129 DASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEP 208 (330)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCC
Confidence 35899999999999999988886 555 7999999997655422 22 32 2456889999999999988654 5
Q ss_pred cCcHHHHhcCCCCeEEEEecCC---Ccccchhhhhc
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLKK 910 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~---d~eid~~~l~~ 910 (1027)
++..+ ++|+|..+..+|.. ..|+|-+.+..
T Consensus 209 il~~~---~l~~G~hI~aiGad~p~k~Eld~e~l~r 241 (330)
T COG2423 209 VLKAE---WLKPGTHINAIGADAPGKRELDPEVLAR 241 (330)
T ss_pred eecHh---hcCCCcEEEecCCCCcccccCCHHHHHh
Confidence 66654 58899999999974 46888776653
No 443
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=96.31 E-value=0.014 Score=66.68 Aligned_cols=88 Identities=11% Similarity=0.103 Sum_probs=59.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEec---CCCc-ccCcH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTC---TGNY-HVITH 881 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~a---tG~~-~vi~~ 881 (1027)
.+.||+|+|+|+|.+|+.+|+.|+..|+ +|+|+.+...+.... +. ....-+....+||||.| |+.+ .+++.
T Consensus 171 ~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~~~~~---~~-~~~~~~~~~~~DvVIs~t~~Tas~~p~i~~ 246 (338)
T PRK00676 171 KSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLTLPYR---TV-VREELSFQDPYDVIFFGSSESAYAFPHLSW 246 (338)
T ss_pred CccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccccchh---hh-hhhhhhcccCCCEEEEcCCcCCCCCceeeH
Confidence 4899999999999999999999999996 799998776321100 00 00011234579999986 4433 46777
Q ss_pred HHHhcCCCCeEEEEecCC
Q psy15208 882 DHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~ 899 (1027)
+.++..++- ++++.+.+
T Consensus 247 ~~~~~~~~r-~~iDLAvP 263 (338)
T PRK00676 247 ESLADIPDR-IVFDFNVP 263 (338)
T ss_pred HHHhhccCc-EEEEecCC
Confidence 776654432 66666664
No 444
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=96.31 E-value=0.017 Score=64.84 Aligned_cols=90 Identities=16% Similarity=0.083 Sum_probs=70.4
Q ss_pred cCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHH-------Hh--ccCCEEEecCCCcc
Q psy15208 809 AGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEY-------AK--KYGDIFVTCTGNYH 877 (1027)
Q Consensus 809 ~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e-------~l--~~aDvvi~atG~~~ 877 (1027)
.|.+|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|.+ +.+..+ .. ...|+|++++|...
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~ 225 (325)
T cd05280 146 EDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDV 225 (325)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHH
Confidence 3579999998 9999999999999999999999888887777777764 222111 11 24799999998753
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d 900 (1027)
+ .+.++.|++++.++.+|..+
T Consensus 226 -~-~~~~~~l~~~g~~v~~g~~~ 246 (325)
T cd05280 226 -L-ANLLKQTKYGGVVASCGNAA 246 (325)
T ss_pred -H-HHHHHhhcCCCEEEEEecCC
Confidence 3 45689999999999999753
No 445
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=96.29 E-value=0.0094 Score=69.78 Aligned_cols=91 Identities=19% Similarity=0.131 Sum_probs=70.5
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH------------------------
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME------------------------ 860 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~------------------------ 860 (1027)
...|.+|+|.|. |.+|+.+++.++.+|++|++++.++.+...+...|.+ +++.+
T Consensus 187 ~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (398)
T TIGR01751 187 VKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFK 266 (398)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcch
Confidence 357899999998 9999999999999999988888777777777777753 22211
Q ss_pred -------HHh--ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 861 -------YAK--KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 861 -------e~l--~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+.. ...|+|++++|.. .+. ..++.+++++.++++|..
T Consensus 267 ~~~~~~~~~~~~~g~d~vld~~g~~-~~~-~~~~~l~~~G~~v~~g~~ 312 (398)
T TIGR01751 267 RFGKRIRELTGGEDPDIVFEHPGRA-TFP-TSVFVCRRGGMVVICGGT 312 (398)
T ss_pred hHHHHHHHHcCCCCceEEEECCcHH-HHH-HHHHhhccCCEEEEEccc
Confidence 111 2489999999864 344 458999999999999875
No 446
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.27 E-value=0.017 Score=65.02 Aligned_cols=49 Identities=18% Similarity=0.275 Sum_probs=40.8
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCc
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDP 843 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp 843 (1027)
.++...+.+. +..+.||+|+|+|.|.+|++++..+...|++ |+++++++
T Consensus 111 ~G~~~~l~~~-~~~~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 111 LGFVRNLREH-GVDVKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred HHHHHHHHhc-CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 4566666543 3357899999999999999999999999995 99999986
No 447
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.27 E-value=0.025 Score=65.39 Aligned_cols=112 Identities=18% Similarity=0.138 Sum_probs=73.8
Q ss_pred CccEEEEECCCCCCCCCCCh--HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDN--KVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~--~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
..|+++++||+|-.-+.... ..+..+...|. ...++.+|+.-...-... ..+...+.++.+..++|.+..+...+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~-~~yPtQL~qlv~~Y~~Lv~~~G~~nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHG-HKYPTQLRQLVATYDYLVESEGNKNI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCC-CcCchHHHHHHHHHHHHHhccCCCeE
Confidence 46999999996543333221 12223444443 458899998644300111 12334688888899999855566789
Q ss_pred EEEEechhHHHHHHHHHhcCC---cCCccEEEEEccCCCc
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDK---EISIKILILISVAVKK 146 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~---~~~V~gLVli~p~~~~ 146 (1027)
+|+|-|.||.+++.+...... ...++++|+++|....
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 999999999999887654322 1347999999997754
No 448
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=96.26 E-value=0.013 Score=68.62 Aligned_cols=88 Identities=14% Similarity=0.124 Sum_probs=62.8
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh----------------cCcEE---cCHHHHhccCCEEEec
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM----------------EGFLV---VTMEYAKKYGDIFVTC 872 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~----------------~G~~v---~~~~e~l~~aDvvi~a 872 (1027)
+|+|+|.|.+|..+|..++ .|-+|+++|+|+.+..+... .+... .+..+++.++|+||.|
T Consensus 2 kI~VIGlGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii~ 80 (388)
T PRK15057 2 KITISGTGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIA 80 (388)
T ss_pred EEEEECCCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEEe
Confidence 6899999999999997776 59899999999977654332 12222 2356777899999999
Q ss_pred CCCc-----ccCc-----H--HHHhcCCCCeEEEEecCCC
Q psy15208 873 TGNY-----HVIT-----H--DHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~-----~vi~-----~--~~~~~mk~gailvNvG~~d 900 (1027)
++++ ...+ . +.+..+++|.++|+.+..+
T Consensus 81 Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~ 120 (388)
T PRK15057 81 TPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVP 120 (388)
T ss_pred CCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecC
Confidence 8865 1111 1 1234478999999887764
No 449
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=96.26 E-value=0.013 Score=66.85 Aligned_cols=92 Identities=20% Similarity=0.186 Sum_probs=71.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH------HHh----c-cCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME------YAK----K-YGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~------e~l----~-~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.+|+.+++.++.+|++|+++..++.+...+...|++ +.+.. +.+ . ..|++++++|.
T Consensus 164 ~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 243 (345)
T cd08260 164 KPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGI 243 (345)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCCCCEEEEcCCC
Confidence 478999999999999999999999999999998887776666667763 33221 111 1 48999999986
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...+. ..++.|++++.++++|..+
T Consensus 244 ~~~~~-~~~~~l~~~g~~i~~g~~~ 267 (345)
T cd08260 244 PETCR-NSVASLRKRGRHVQVGLTL 267 (345)
T ss_pred HHHHH-HHHHHhhcCCEEEEeCCcC
Confidence 54344 4588999999999999753
No 450
>PRK13814 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.25 E-value=0.4 Score=54.66 Aligned_cols=130 Identities=18% Similarity=0.211 Sum_probs=85.5
Q ss_pred ccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcC---ChhHHHHHHHHHhCCC-EEEEEcCCch
Q psy15208 771 SFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGY---GDVGKGSAQAMRALSA-QVWIIEIDPI 844 (1027)
Q Consensus 771 ~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~---G~IG~~vA~~a~~~Ga-~ViV~d~dp~ 844 (1027)
.+||||.-++..-|. -|.+.|- +.+..| .+.|.+|+++|- +++.+..+..+..+|+ +|.++-+...
T Consensus 124 ~vPvINag~g~~~HP-------tQaLaDl~Ti~e~~g-~l~g~~va~vGD~~~~rv~~Sl~~~~a~~g~~~v~~~~P~~~ 195 (310)
T PRK13814 124 SGVVINAGDGNHQHP-------SQALIDLMTIKQHKP-HWNKLCVTIIGDIRHSRVANSLMDGLVTMGVPEIRLVGPSSL 195 (310)
T ss_pred CCCeEECCcCCCCCc-------hHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCcHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 589998866543332 2444433 222334 478999999998 4899999999999999 8998843321
Q ss_pred hHHHHhhcCcE-EcCHHHHhccCCEEEecC-C--------------CcccCcHHHHhcCCCCeEEEEecCC--Ccccchh
Q psy15208 845 CALQAAMEGFL-VVTMEYAKKYGDIFVTCT-G--------------NYHVITHDHMRDMKDQAIVCNIGHF--DNEIEVE 906 (1027)
Q Consensus 845 r~~~A~~~G~~-v~~~~e~l~~aDvvi~at-G--------------~~~vi~~~~~~~mk~gailvNvG~~--d~eid~~ 906 (1027)
.........+. +.+++++++++|||.+.. + ..-.++.+.++.+|+++++.-++.. ..||+-+
T Consensus 196 ~p~~~~~~~~~~~~d~~ea~~~aDvvy~~~~~~er~~~~~~~~~~~~~y~v~~~~l~~a~~~~i~mHcLP~~Rg~Ei~~~ 275 (310)
T PRK13814 196 LPDKVGNDSIKKFTELKPSLLNSDVIVTLRLQKERHDNSVDIDAFRGSFRLTPEKLYSAKPDAIVMHPGPVNREVEINSD 275 (310)
T ss_pred CcCccccceEEEEcCHHHHhCCCCEEEECccccccccchhHHHHhCCCcccCHHHHHhcCCCCEEECCCCCCCCCeeCHH
Confidence 11111111244 357899999999998632 1 1135677778888999999877774 4566655
Q ss_pred hh
Q psy15208 907 KL 908 (1027)
Q Consensus 907 ~l 908 (1027)
.+
T Consensus 276 V~ 277 (310)
T PRK13814 276 VA 277 (310)
T ss_pred Hh
Confidence 33
No 451
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=96.24 E-value=0.012 Score=66.35 Aligned_cols=92 Identities=17% Similarity=0.136 Sum_probs=70.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH------HHhccCCEEEecCCCcccC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME------YAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~------e~l~~aDvvi~atG~~~vi 879 (1027)
...|++|+|.|.|.+|+.+++.++.+|++|+++..++.+...+...|.+ +.... ......|+++++.+....+
T Consensus 160 ~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~ 239 (330)
T cd08245 160 PRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAA 239 (330)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEECCCcHHHH
Confidence 3578999999999999999999999999999998888776666666654 22211 1123589999998766543
Q ss_pred cHHHHhcCCCCeEEEEecCC
Q psy15208 880 THDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~ 899 (1027)
.+.++.|+.++.++++|..
T Consensus 240 -~~~~~~l~~~G~~i~~~~~ 258 (330)
T cd08245 240 -EAALGGLRRGGRIVLVGLP 258 (330)
T ss_pred -HHHHHhcccCCEEEEECCC
Confidence 4568999999999999864
No 452
>PRK07680 late competence protein ComER; Validated
Probab=96.24 E-value=0.015 Score=64.68 Aligned_cols=86 Identities=21% Similarity=0.255 Sum_probs=62.5
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC----EEEEEcCCchhHHHHhh-c-CcEE-cCHHHHhccCCEEEecCCCcc---cCcH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA----QVWIIEIDPICALQAAM-E-GFLV-VTMEYAKKYGDIFVTCTGNYH---VITH 881 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga----~ViV~d~dp~r~~~A~~-~-G~~v-~~~~e~l~~aDvvi~atG~~~---vi~~ 881 (1027)
+++|||+|.+|..++..+...|. +|+++++++.+...... . |+.+ .+..+++..+|+||.|+.... ++ +
T Consensus 2 ~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~p~~~~~vl-~ 80 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVKPLDIYPLL-Q 80 (273)
T ss_pred EEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecCHHHHHHHH-H
Confidence 58999999999999999998883 79999999876554433 2 6664 467777889999999885332 22 1
Q ss_pred HHHhcCCCCeEEEEecC
Q psy15208 882 DHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~ 898 (1027)
+....++++.+++.+..
T Consensus 81 ~l~~~l~~~~~iis~~a 97 (273)
T PRK07680 81 KLAPHLTDEHCLVSITS 97 (273)
T ss_pred HHHhhcCCCCEEEEECC
Confidence 21234667788888764
No 453
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=96.24 E-value=0.017 Score=66.00 Aligned_cols=91 Identities=21% Similarity=0.225 Sum_probs=71.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHH----hc-cCCEEEecCCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYA----KK-YGDIFVTCTGNY 876 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~----l~-~aDvvi~atG~~ 876 (1027)
.|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|.+ +.+ ..+. .. ..|++++++|..
T Consensus 175 ~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 254 (350)
T cd08240 175 ADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNS 254 (350)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHHHHhCCCCcEEEECCCCH
Confidence 78999999999999999999999999 788998888777777777764 222 1111 12 479999999865
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..+. ..++.|++++.++.+|..+
T Consensus 255 ~~~~-~~~~~l~~~g~~v~~g~~~ 277 (350)
T cd08240 255 ATAS-LAFDILAKGGKLVLVGLFG 277 (350)
T ss_pred HHHH-HHHHHhhcCCeEEEECCCC
Confidence 5444 5589999999999998764
No 454
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=96.23 E-value=0.011 Score=71.06 Aligned_cols=89 Identities=9% Similarity=-0.060 Sum_probs=68.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc----CcE----EcCHHHHhcc---CCEEEecCCCcccCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME----GFL----VVTMEYAKKY---GDIFVTCTGNYHVIT 880 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~----G~~----v~~~~e~l~~---aDvvi~atG~~~vi~ 880 (1027)
+|++||.|..|..+|+.+...|-+|+|+|+++.+....... |.. ..++++++.. +|+|+++..+...++
T Consensus 8 ~IG~IGLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV~ 87 (493)
T PLN02350 8 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPVD 87 (493)
T ss_pred CEEEEeeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHHH
Confidence 69999999999999999999999999999998776543332 542 3467777765 999998876543222
Q ss_pred ---HHHHhcCCCCeEEEEecCCC
Q psy15208 881 ---HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ---~~~~~~mk~gailvNvG~~d 900 (1027)
...+..|++|.++|+.|-..
T Consensus 88 ~Vi~gl~~~l~~G~iiID~sT~~ 110 (493)
T PLN02350 88 QTIKALSEYMEPGDCIIDGGNEW 110 (493)
T ss_pred HHHHHHHhhcCCCCEEEECCCCC
Confidence 24477899999999998763
No 455
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.22 E-value=0.013 Score=64.68 Aligned_cols=66 Identities=17% Similarity=0.124 Sum_probs=53.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCC---CEEEEEcCCchhHHHHhh-cCcEEc-CHHHHhccCCEEEecCCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALS---AQVWIIEIDPICALQAAM-EGFLVV-TMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~G---a~ViV~d~dp~r~~~A~~-~G~~v~-~~~e~l~~aDvvi~atG~~ 876 (1027)
.+++|||+|.+|..+|..+...| .+|.++++++.+...... .|+.+. +.++.+.++|+|+.|+...
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~~ 73 (267)
T PRK11880 3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKPQ 73 (267)
T ss_pred CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCHH
Confidence 47999999999999999999888 689999999876655544 376643 5667788999999988654
No 456
>PLN02702 L-idonate 5-dehydrogenase
Probab=96.21 E-value=0.014 Score=67.30 Aligned_cols=91 Identities=21% Similarity=0.239 Sum_probs=70.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcEE-c-------CHHHHh--------ccCCEEE
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFLV-V-------TMEYAK--------KYGDIFV 870 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~v-~-------~~~e~l--------~~aDvvi 870 (1027)
..|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|++. . +..+.+ ...|+|+
T Consensus 180 ~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (364)
T PLN02702 180 GPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSF 259 (364)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEE
Confidence 5799999999999999999999999995 788888887777777777642 1 111211 2479999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+++|+...+ .+.++.++++++++.+|..
T Consensus 260 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~ 287 (364)
T PLN02702 260 DCVGFNKTM-STALEATRAGGKVCLVGMG 287 (364)
T ss_pred ECCCCHHHH-HHHHHHHhcCCEEEEEccC
Confidence 999865544 4568999999999999964
No 457
>KOG3253|consensus
Probab=96.21 E-value=0.013 Score=69.76 Aligned_cols=139 Identities=13% Similarity=0.204 Sum_probs=91.1
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC--cEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHH-------H
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG--YISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQ-------K 102 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G--y~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~-------~ 102 (1027)
..|+++++||.+. ....++ +++.|-..|.-.| ..+-.+|++.. ..+ .+...-++..+.+.+ .
T Consensus 175 ~spl~i~aps~p~-ap~tSd-~~~~wqs~lsl~gevvev~tfdl~n~--igG-----~nI~h~ae~~vSf~r~kvlei~g 245 (784)
T KOG3253|consen 175 ASPLAIKAPSTPL-APKTSD-RMWSWQSRLSLKGEVVEVPTFDLNNP--IGG-----ANIKHAAEYSVSFDRYKVLEITG 245 (784)
T ss_pred CCceEEeccCCCC-CCccch-HHHhHHHHHhhhceeeeeccccccCC--CCC-----cchHHHHHHHHHHhhhhhhhhhc
Confidence 4688999999762 222222 3445555554444 34566776521 111 122233333333332 3
Q ss_pred hCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---------CCCCCCCCcEEEEEeCCCCCCChHHHH
Q psy15208 103 KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK---------WLIPEVPKNTIIIHGELDEIIPLKDVF 173 (1027)
Q Consensus 103 ~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~---------~~l~~i~~PvLiIhG~~D~iVP~~~~~ 173 (1027)
.++..+++|+|+|||+.++..+.....+. .|+++|.++-+... ..+-.+..|+|++-|.+|..+++...+
T Consensus 246 efpha~IiLvGrsmGAlVachVSpsnsdv-~V~~vVCigypl~~vdgprgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME 324 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPSNSDV-EVDAVVCIGYPLDTVDGPRGIRDEALLDMKQPVLFVIGSNDHMCSPNSME 324 (784)
T ss_pred cCCCCceEEEecccCceeeEEeccccCCc-eEEEEEEecccccCCCcccCCcchhhHhcCCceEEEecCCcccCCHHHHH
Confidence 57788999999999999988888766543 38999999854321 135567899999999999999999988
Q ss_pred hhhCCCC
Q psy15208 174 LWANPLD 180 (1027)
Q Consensus 174 ~l~~~~~ 180 (1027)
...++..
T Consensus 325 ~vreKMq 331 (784)
T KOG3253|consen 325 EVREKMQ 331 (784)
T ss_pred HHHHHhh
Confidence 7777654
No 458
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=96.20 E-value=0.019 Score=64.01 Aligned_cols=91 Identities=23% Similarity=0.177 Sum_probs=70.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEYAK------KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------~~aDvvi~atG 874 (1027)
..|.+|+|.|.|.+|..+++.++.+|++ |+++..++.+...+...|++ +.+ ..+.+ ...|+++++.|
T Consensus 128 ~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g 207 (312)
T cd08269 128 RAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVG 207 (312)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 5799999999999999999999999998 99988877676666667764 221 22221 24799999987
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
....+. ..++.|++++.++++|..
T Consensus 208 ~~~~~~-~~~~~l~~~g~~~~~g~~ 231 (312)
T cd08269 208 HQWPLD-LAGELVAERGRLVIFGYH 231 (312)
T ss_pred CHHHHH-HHHHHhccCCEEEEEccC
Confidence 665334 458899999999999865
No 459
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.19 E-value=0.0087 Score=64.23 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=67.8
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH--HhhcCcEEcC---HHHHhccCCEEEecCCCcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ--AAMEGFLVVT---MEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~--A~~~G~~v~~---~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
..+.||+|+|+|.|.+|..=|+.+...||+|+|+-.+...... +...+..... ..+.+..+++||.||++.. ++
T Consensus 8 ~~l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~-ln 86 (210)
T COG1648 8 LDLEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEE-LN 86 (210)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHH-HH
Confidence 4589999999999999999999999999999998544411221 1122211111 1122345999999998876 78
Q ss_pred HHHHhcCCCCeEEEEecCCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d 900 (1027)
++.+...+.-.+++|+..-+
T Consensus 87 ~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 87 ERIAKAARERRILVNVVDDP 106 (210)
T ss_pred HHHHHHHHHhCCceeccCCc
Confidence 88888888889999996643
No 460
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.18 E-value=0.016 Score=64.99 Aligned_cols=80 Identities=21% Similarity=0.169 Sum_probs=57.6
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHh-hc----Cc---EEcCH---HH
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAA-ME----GF---LVVTM---EY 861 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~-~~----G~---~v~~~---~e 861 (1027)
.++..++.+. ...+.||+|+|+|+|..+|+++..|...|+ +|+++++++.++..-. .. +. ...+. .+
T Consensus 112 ~Gf~~~L~~~-~~~~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~ 190 (283)
T PRK14027 112 SGFGRGMEEG-LPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIED 190 (283)
T ss_pred HHHHHHHHhc-CcCcCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHH
Confidence 5677776542 224679999999999999999999999998 7999999987765422 11 11 22222 23
Q ss_pred HhccCCEEEecCC
Q psy15208 862 AKKYGDIFVTCTG 874 (1027)
Q Consensus 862 ~l~~aDvvi~atG 874 (1027)
.+..+|+||+||.
T Consensus 191 ~~~~~divINaTp 203 (283)
T PRK14027 191 VIAAADGVVNATP 203 (283)
T ss_pred HHhhcCEEEEcCC
Confidence 4567899999884
No 461
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.16 E-value=0.017 Score=68.29 Aligned_cols=89 Identities=18% Similarity=0.172 Sum_probs=63.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCc-EEc--CHHHH---------------hccCCEEEec
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGF-LVV--TMEYA---------------KKYGDIFVTC 872 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~-~v~--~~~e~---------------l~~aDvvi~a 872 (1027)
++|+|+|.|.+|..+|..++..|-+|+++|+++.+... ...|. .+. .+++. +..+|+||.|
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~-l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDT-INRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCCEEEEEeCCHHHHHH-HHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 68999999999999999999999999999999976654 22221 110 12222 3379999999
Q ss_pred CCCc----------ccC--cHHHHhcCCCCeEEEEecCCC
Q psy15208 873 TGNY----------HVI--THDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~----------~vi--~~~~~~~mk~gailvNvG~~d 900 (1027)
.+++ .+. .......+++|.++|+.+..+
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~ 122 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP 122 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 8874 221 122345689999999987753
No 462
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=96.16 E-value=0.009 Score=73.40 Aligned_cols=70 Identities=24% Similarity=0.214 Sum_probs=52.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc---------------------hhHHHHhhcCcEEc-C-------
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP---------------------ICALQAAMEGFLVV-T------- 858 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp---------------------~r~~~A~~~G~~v~-~------- 858 (1027)
..|++|+|+|.|++|..+|..|+..|++|+++|..+ .+...+...|+++. +
T Consensus 135 ~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~~ 214 (564)
T PRK12771 135 DTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGEDI 214 (564)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCcC
Confidence 479999999999999999999999999999998532 23345667787532 1
Q ss_pred -HHHHhccCCEEEecCCCcc
Q psy15208 859 -MEYAKKYGDIFVTCTGNYH 877 (1027)
Q Consensus 859 -~~e~l~~aDvvi~atG~~~ 877 (1027)
.++.....|+||.++|...
T Consensus 215 ~~~~~~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 215 TLEQLEGEFDAVFVAIGAQL 234 (564)
T ss_pred CHHHHHhhCCEEEEeeCCCC
Confidence 2222235799999998653
No 463
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=96.15 E-value=0.017 Score=65.29 Aligned_cols=90 Identities=21% Similarity=0.160 Sum_probs=69.7
Q ss_pred CCEEEEEc-CChhHHHHHHHHHhCC-CEEEEEcCCchhHHHHhhcCcE-EcC----HHHHh-----ccCCEEEecCCCcc
Q psy15208 810 GKIAVIIG-YGDVGKGSAQAMRALS-AQVWIIEIDPICALQAAMEGFL-VVT----MEYAK-----KYGDIFVTCTGNYH 877 (1027)
Q Consensus 810 Gk~VvViG-~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~A~~~G~~-v~~----~~e~l-----~~aDvvi~atG~~~ 877 (1027)
|++|+|.| .|.+|+.+++.++.+| ++|++++.++.+...+...|++ +++ ..+.+ ...|++++++|...
T Consensus 150 g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~ 229 (336)
T cd08252 150 GKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQ 229 (336)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHH
Confidence 89999999 5999999999999999 9999998888777777767763 221 11111 24799999998654
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.+. ..++.|++++.++++|..+
T Consensus 230 ~~~-~~~~~l~~~g~~v~~g~~~ 251 (336)
T cd08252 230 HWD-AMAELIAPQGHICLIVDPQ 251 (336)
T ss_pred HHH-HHHHHhcCCCEEEEecCCC
Confidence 444 5589999999999998653
No 464
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.15 E-value=0.0078 Score=66.71 Aligned_cols=93 Identities=18% Similarity=0.217 Sum_probs=74.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc---------------C----------HHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV---------------T----------MEY 861 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~---------------~----------~~e 861 (1027)
..++.+|+++|.|-+|...+..++..|+-|+..|+.|.+..+-...|.+.. + +.+
T Consensus 161 tv~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 161 TVSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred cccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 467789999999999999999999999999999999988777555554322 2 123
Q ss_pred HhccCCEEEecC---C--CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 862 AKKYGDIFVTCT---G--NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 862 ~l~~aDvvi~at---G--~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.+++.|||||+. | .+.++++++++.||+|.++++....
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~ 283 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAE 283 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhh
Confidence 345689999864 3 4578999999999999999987653
No 465
>PLN02606 palmitoyl-protein thioesterase
Probab=96.14 E-value=0.033 Score=62.49 Aligned_cols=106 Identities=13% Similarity=0.035 Sum_probs=69.2
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CCcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYP-YLPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~-~~pv 109 (1027)
+.| ||+.||.+...++. .+..+.+.+... |+-+..+- -|-+...+. +..+-+.++.+.+.+..... ..-+
T Consensus 26 ~~P-vViwHGlgD~~~~~---~~~~~~~~i~~~~~~pg~~v~-ig~~~~~s~---~~~~~~Qv~~vce~l~~~~~L~~G~ 97 (306)
T PLN02606 26 SVP-FVLFHGFGGECSNG---KVSNLTQFLINHSGYPGTCVE-IGNGVQDSL---FMPLRQQASIACEKIKQMKELSEGY 97 (306)
T ss_pred CCC-EEEECCCCcccCCc---hHHHHHHHHHhCCCCCeEEEE-ECCCccccc---ccCHHHHHHHHHHHHhcchhhcCce
Confidence 344 58889997544432 466777777522 66555554 233332222 13456667777777765211 1249
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.++|+|+||.+.-.++.+.|+.+.|+-+|.++++..
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999999987557999999987643
No 466
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=96.13 E-value=0.11 Score=57.17 Aligned_cols=122 Identities=16% Similarity=0.184 Sum_probs=86.0
Q ss_pred hhhhhhHHHHHh---hhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-----------EEEEEcCC-----------ch
Q psy15208 790 YGCRESLIDGIK---RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-----------QVWIIEID-----------PI 844 (1027)
Q Consensus 790 ~g~~~s~~~~i~---r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-----------~ViV~d~d-----------p~ 844 (1027)
.||+--...++. +.++..+...+++++|+|.-|.++|+.+...++ ++.++|.. +.
T Consensus 2 qGTaaV~lAgllnAlk~~g~~l~d~riv~~GAGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~ 81 (254)
T cd00762 2 QGTASVAVAGLLAALKVTKKKISEHKVLFNGAGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPN 81 (254)
T ss_pred chhHHHHHHHHHHHHHHhCCChhhcEEEEECcCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHH
Confidence 355554444433 355777899999999999999999999988876 57777654 22
Q ss_pred hHHH--HhhcCcEEcCHHHHhc--cCCEEEecCCCcccCcHHHHhcCC---CCeEEEEecCCCc--ccchhhhhcc
Q psy15208 845 CALQ--AAMEGFLVVTMEYAKK--YGDIFVTCTGNYHVITHDHMRDMK---DQAIVCNIGHFDN--EIEVEKLKKY 911 (1027)
Q Consensus 845 r~~~--A~~~G~~v~~~~e~l~--~aDvvi~atG~~~vi~~~~~~~mk---~gailvNvG~~d~--eid~~~l~~~ 911 (1027)
+... .....-+..++.++++ ..|++|-+++..++++++.++.|. +.-++.-..-... |+..+...++
T Consensus 82 ~~~~~~~~~~~~~~~~L~eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tpe~a~~~ 157 (254)
T cd00762 82 EYHLARFANPERESGDLEDAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALSNPTSKAECTAEEAYTA 157 (254)
T ss_pred HHHHHHHcCcccccCCHHHHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECCCcCCccccCHHHHHhh
Confidence 2221 1122223458999998 899999999888999999999998 6666655544433 7776655444
No 467
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.11 E-value=0.028 Score=59.97 Aligned_cols=93 Identities=15% Similarity=0.196 Sum_probs=63.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchh---HH--------------HH-------hhcCcEEc----
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPIC---AL--------------QA-------AMEGFLVV---- 857 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r---~~--------------~A-------~~~G~~v~---- 857 (1027)
.|..++|+|+|+|.+|..+|..+...|. +|+++|.|... +. ++ .....++.
T Consensus 18 ~L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~ 97 (200)
T TIGR02354 18 KLEQATVAICGLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE 97 (200)
T ss_pred HHhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence 4788999999999999999999999999 79999988211 00 00 00111211
Q ss_pred -----CHHHHhccCCEEEecCCCc---ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 858 -----TMEYAKKYGDIFVTCTGNY---HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 858 -----~~~e~l~~aDvvi~atG~~---~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
++++.+..+|+||+|+.+. ..+.++....++...++...|..
T Consensus 98 ~i~~~~~~~~~~~~DlVi~a~Dn~~~k~~l~~~~~~~~~~~~ii~~~g~~ 147 (200)
T TIGR02354 98 KITEENIDKFFKDADIVCEAFDNAEAKAMLVNAVLEKYKDKYLIAASGLA 147 (200)
T ss_pred eCCHhHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHcCCCcEEEEeccc
Confidence 1344567799999998763 34455555667777777765554
No 468
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.11 E-value=0.03 Score=60.85 Aligned_cols=108 Identities=17% Similarity=0.247 Sum_probs=72.1
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC-----cEEEEEcCCCCCCCCCC------C-----------CCccch
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG-----YISIRMNFRGVGASSGT------Y-----------DSGNGE 89 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G-----y~Vla~DlrGhG~S~g~------~-----------~~~~~~ 89 (1027)
+-|+ +|+||. +|+.+ .+..++..|...+ --++.+|--|.=.-.|. + .+....
T Consensus 45 ~iPT-IfIhGs---gG~as--S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~ 118 (288)
T COG4814 45 AIPT-IFIHGS---GGTAS--SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQ 118 (288)
T ss_pred ccce-EEEecC---CCChh--HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhH
Confidence 3455 999997 44432 3566777777654 23566666652111111 1 112234
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc---CCccEEEEEccCCC
Q psy15208 90 TDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE---ISIKILILISVAVK 145 (1027)
Q Consensus 90 ~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~---~~V~gLVli~p~~~ 145 (1027)
..=+..++.+|..+|....+-++||||||.-...++..+... +.+..+|.++.+..
T Consensus 119 s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 119 SKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 555678889999999998999999999999999999877542 34788998887654
No 469
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=96.11 E-value=0.016 Score=65.52 Aligned_cols=91 Identities=15% Similarity=0.054 Sum_probs=71.1
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHH-HhccCCEEEecCCCcccCcHHHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEY-AKKYGDIFVTCTGNYHVITHDHM 884 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e-~l~~aDvvi~atG~~~vi~~~~~ 884 (1027)
...|.+|+|.|.|.+|+.+++.++..|++|+++..++.+...+...|++ +.+..+ .-...|+++++++.... -.+.+
T Consensus 165 ~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~vD~vi~~~~~~~~-~~~~~ 243 (329)
T cd08298 165 LKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDLPPEPLDAAIIFAPVGAL-VPAAL 243 (329)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCccCCCcccEEEEcCCcHHH-HHHHH
Confidence 3578999999999999999999999999999998877777777777874 232222 11347999988776553 44568
Q ss_pred hcCCCCeEEEEecC
Q psy15208 885 RDMKDQAIVCNIGH 898 (1027)
Q Consensus 885 ~~mk~gailvNvG~ 898 (1027)
+.|++++.++..|.
T Consensus 244 ~~l~~~G~~v~~g~ 257 (329)
T cd08298 244 RAVKKGGRVVLAGI 257 (329)
T ss_pred HHhhcCCEEEEEcC
Confidence 99999999998884
No 470
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.10 E-value=0.016 Score=67.92 Aligned_cols=85 Identities=21% Similarity=0.253 Sum_probs=62.7
Q ss_pred HHHHHHHHHHhCCcEE----E--EEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHH
Q psy15208 53 VVQTLVRVMLSLGYIS----I--RMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQK 126 (1027)
Q Consensus 53 ~~~~la~~La~~Gy~V----l--a~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~ 126 (1027)
.|..+++.|.+.||.. + -+|+|- |. .........+...++.+.... ..+++|+||||||.++..+..
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~~---~~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~ 138 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---SP---AERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQ 138 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---ch---hhHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHH
Confidence 5888999999988742 2 267762 11 112345677777777777665 679999999999999999988
Q ss_pred hcCCc----CCccEEEEEccCC
Q psy15208 127 RLDKE----ISIKILILISVAV 144 (1027)
Q Consensus 127 ~~p~~----~~V~gLVli~p~~ 144 (1027)
..+.. ..|+++|.++++.
T Consensus 139 ~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 139 WMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred hccchhhHHhhhhEEEEeCCCC
Confidence 87643 2599999999764
No 471
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=96.10 E-value=0.057 Score=61.03 Aligned_cols=119 Identities=16% Similarity=0.142 Sum_probs=77.4
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCchhH-----HHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCc---HHHHhcCCCCe
Q psy15208 821 VGKGSAQAMRALSAQVWIIEIDPICA-----LQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVIT---HDHMRDMKDQA 891 (1027)
Q Consensus 821 IG~~vA~~a~~~Ga~ViV~d~dp~r~-----~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~---~~~~~~mk~ga 891 (1027)
.|+++|+.|...|-.|+|+|+++.+. ......|+.+. +..++++++|+||++.++...+. ...++.+++|.
T Consensus 31 gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L~~Ga 110 (341)
T TIGR01724 31 GGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHVPENA 110 (341)
T ss_pred CHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcCCCCC
Confidence 69999999999999999999887533 23556688755 58899999999999987654221 23577899999
Q ss_pred EEEEecCCCcccchhhhhc-cceeccccceeeee---cCC--CcEEEEecCCcc
Q psy15208 892 IVCNIGHFDNEIEVEKLKK-YKWENIKPQVDHII---FPD--GKKIILLAEGRL 939 (1027)
Q Consensus 892 ilvNvG~~d~eid~~~l~~-~~~~~~~~~v~~y~---~~d--g~~i~LLa~Grl 939 (1027)
++|+++..+.+.-...+.. ++...-...++.|. .|. ++..|+++.+..
T Consensus 111 IVID~STIsP~t~~~~~e~~l~~~r~d~~v~s~HP~~vP~~~~~~~~~~~~~~~ 164 (341)
T TIGR01724 111 VICNTCTVSPVVLYYSLEKILRLKRTDVGISSMHPAAVPGTPQHGHYVIGGKPT 164 (341)
T ss_pred EEEECCCCCHHHHHHHHHHHhhcCccccCeeccCCCCCCCCCCCceeeeccccc
Confidence 9999987643222222221 11111122333333 222 667778776653
No 472
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.09 E-value=0.025 Score=63.73 Aligned_cols=80 Identities=21% Similarity=0.191 Sum_probs=56.4
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCch---hHHH-HhhcC------cEEcCHH--
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPI---CALQ-AAMEG------FLVVTME-- 860 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~---r~~~-A~~~G------~~v~~~~-- 860 (1027)
.++..++.+. +..+.||+|+|+|+|..+++++..+...|+ +|+|+++++. ++.. +...+ ..+.+++
T Consensus 109 ~Gf~~~l~~~-~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~ 187 (288)
T PRK12749 109 TGHIRAIKES-GFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ 187 (288)
T ss_pred HHHHHHHHhc-CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhh
Confidence 5666666543 556799999999999999999999999998 8999999853 3322 22111 2233332
Q ss_pred ----HHhccCCEEEecCC
Q psy15208 861 ----YAKKYGDIFVTCTG 874 (1027)
Q Consensus 861 ----e~l~~aDvvi~atG 874 (1027)
+.+.++|+||+||.
T Consensus 188 ~~l~~~~~~aDivINaTp 205 (288)
T PRK12749 188 QAFAEALASADILTNGTK 205 (288)
T ss_pred hhhhhhcccCCEEEECCC
Confidence 24557899999884
No 473
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=96.08 E-value=0.019 Score=64.61 Aligned_cols=90 Identities=16% Similarity=0.056 Sum_probs=68.8
Q ss_pred ccCC-EEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH---HH---h--ccCCEEEecCCCc
Q psy15208 808 IAGK-IAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME---YA---K--KYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk-~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~---e~---l--~~aDvvi~atG~~ 876 (1027)
..|. +|+|.|. |.+|..+++.++.+|++|+++..++.+...+...|++ +.+.. .. + ...|++++++|+.
T Consensus 143 ~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~ 222 (323)
T TIGR02823 143 TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGH 222 (323)
T ss_pred CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHH
Confidence 4677 9999998 9999999999999999988876666666666666763 22211 11 1 1369999999876
Q ss_pred ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
. + .+.++.+++++.++++|..
T Consensus 223 ~-~-~~~~~~l~~~G~~v~~g~~ 243 (323)
T TIGR02823 223 T-L-ANVLAQLKYGGAVAACGLA 243 (323)
T ss_pred H-H-HHHHHHhCCCCEEEEEccc
Confidence 3 3 4568999999999999975
No 474
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=96.04 E-value=0.11 Score=62.83 Aligned_cols=125 Identities=16% Similarity=0.202 Sum_probs=88.1
Q ss_pred cccchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHh----CCC-------EEEEEcCC---------
Q psy15208 786 FDNLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRA----LSA-------QVWIIEID--------- 842 (1027)
Q Consensus 786 ~dn~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~----~Ga-------~ViV~d~d--------- 842 (1027)
.|...||+-....++.. .++..+...+++++|+|.-|.++|+.+.. .|. ++.++|..
T Consensus 270 nDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~ 349 (559)
T PTZ00317 270 NDDIQGTGAVIAAGFLNALKLSGVPPEEQRIVFFGAGSAAIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGD 349 (559)
T ss_pred cccchhHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCc
Confidence 46678988876666543 55777899999999999999999988873 677 78877643
Q ss_pred ---chhHHHHhhcC-cE---EcCHHHHhccC--CEEEecCCCcccCcHHHHhcCCC---CeEEEEecCCC--cccchhhh
Q psy15208 843 ---PICALQAAMEG-FL---VVTMEYAKKYG--DIFVTCTGNYHVITHDHMRDMKD---QAIVCNIGHFD--NEIEVEKL 908 (1027)
Q Consensus 843 ---p~r~~~A~~~G-~~---v~~~~e~l~~a--Dvvi~atG~~~vi~~~~~~~mk~---gailvNvG~~d--~eid~~~l 908 (1027)
+.+...|.... .. ..++.|+++.+ |++|-+++..++++++.++.|.. .-++.-.+-.. .|+..+..
T Consensus 350 ~l~~~k~~fa~~~~~~~~~~~~~L~e~v~~~KPtvLIG~S~~~g~Ft~evv~~Ma~~~~rPIIFaLSNPt~~aE~tpeda 429 (559)
T PTZ00317 350 KLAKHKVPFARTDISAEDSSLKTLEDVVRFVKPTALLGLSGVGGVFTEEVVKTMASNVERPIIFPLSNPTSKAECTAEDA 429 (559)
T ss_pred cccHHHHHHhccccccccccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCCCCcCHHHH
Confidence 22333344321 11 45899999887 99999998888999999999974 55554443332 36665544
Q ss_pred hc
Q psy15208 909 KK 910 (1027)
Q Consensus 909 ~~ 910 (1027)
..
T Consensus 430 ~~ 431 (559)
T PTZ00317 430 YK 431 (559)
T ss_pred Hh
Confidence 33
No 475
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=96.04 E-value=0.013 Score=67.60 Aligned_cols=91 Identities=19% Similarity=0.234 Sum_probs=69.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHH----Hh--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEY----AK--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e----~l--~~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|+.+++.++.+|++ |++++.++.+...+...|.+ +.+ ..+ .. ...|+|++++|
T Consensus 186 ~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg 265 (367)
T cd08263 186 RPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALG 265 (367)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCC
Confidence 4789999999999999999999999998 88888877776666666763 322 111 11 23799999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
....+ .+.++.|++++.++.+|..
T Consensus 266 ~~~~~-~~~~~~l~~~G~~v~~g~~ 289 (367)
T cd08263 266 KPETF-KLALDVVRDGGRAVVVGLA 289 (367)
T ss_pred CHHHH-HHHHHHHhcCCEEEEEccC
Confidence 76333 4568999999999999864
No 476
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=96.03 E-value=0.021 Score=65.01 Aligned_cols=91 Identities=20% Similarity=0.223 Sum_probs=71.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHH----Hh--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEY----AK--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e----~l--~~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|.+ +.+ ..+ .. ...|+++++.|
T Consensus 160 ~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g 239 (340)
T TIGR00692 160 ISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSG 239 (340)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCC
Confidence 5799999999999999999999999996 88898888777777777764 222 111 11 24799999988
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
....+. +.++.|++++.++.+|..
T Consensus 240 ~~~~~~-~~~~~l~~~g~~v~~g~~ 263 (340)
T TIGR00692 240 APKALE-QGLQAVTPGGRVSLLGLP 263 (340)
T ss_pred CHHHHH-HHHHhhcCCCEEEEEccC
Confidence 665444 558889999999999875
No 477
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=96.02 E-value=0.015 Score=67.07 Aligned_cols=93 Identities=18% Similarity=0.171 Sum_probs=70.3
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHH----Hh--ccCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEY----AK--KYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e----~l--~~aDvvi~at 873 (1027)
...|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|++ +++ ..+ .. ...|++++++
T Consensus 180 ~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~ 259 (363)
T cd08279 180 VRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAV 259 (363)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcC
Confidence 35789999999999999999999999996 88888877776666666653 222 111 11 2379999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|....+. +.++.++++++++.+|..+
T Consensus 260 ~~~~~~~-~~~~~l~~~G~~v~~g~~~ 285 (363)
T cd08279 260 GRAATIR-QALAMTRKGGTAVVVGMGP 285 (363)
T ss_pred CChHHHH-HHHHHhhcCCeEEEEecCC
Confidence 8654333 5588899999999998653
No 478
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=96.00 E-value=0.02 Score=65.12 Aligned_cols=93 Identities=17% Similarity=0.206 Sum_probs=71.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------~~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|.+ +.+ ..+.+ ...|+|+++.|
T Consensus 162 ~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 241 (341)
T PRK05396 162 LVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSG 241 (341)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCCEEEECCC
Confidence 479999999999999999999999999 688887777666666667764 222 11221 24899999988
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
....+. ..++.+++++.+++.|..+.
T Consensus 242 ~~~~~~-~~~~~l~~~G~~v~~g~~~~ 267 (341)
T PRK05396 242 APSAFR-QMLDNMNHGGRIAMLGIPPG 267 (341)
T ss_pred CHHHHH-HHHHHHhcCCEEEEEecCCC
Confidence 765444 45888999999999998653
No 479
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=96.00 E-value=0.023 Score=69.25 Aligned_cols=81 Identities=26% Similarity=0.261 Sum_probs=56.4
Q ss_pred hhHHHHHhhh---------cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-hhcCcEEcCHHHH-
Q psy15208 794 ESLIDGIKRA---------TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-AMEGFLVVTMEYA- 862 (1027)
Q Consensus 794 ~s~~~~i~r~---------t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-~~~G~~v~~~~e~- 862 (1027)
.+++.++.+. .+..+.+|+|+|+|.|.+|++++..|+..|++|+++++++.++... ...+....+.++.
T Consensus 354 ~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~ 433 (529)
T PLN02520 354 IGAISAIEDGLRASGSSPASGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQALTLADLE 433 (529)
T ss_pred HHHHHHHHhhhcccccccccccCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhh
Confidence 4566666532 1345789999999999999999999999999999999987665542 2333333333322
Q ss_pred --h-ccCCEEEecCC
Q psy15208 863 --K-KYGDIFVTCTG 874 (1027)
Q Consensus 863 --l-~~aDvvi~atG 874 (1027)
. ..+|+||+||+
T Consensus 434 ~~~~~~~diiINtT~ 448 (529)
T PLN02520 434 NFHPEEGMILANTTS 448 (529)
T ss_pred hhccccCeEEEeccc
Confidence 2 34688887763
No 480
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=95.99 E-value=0.018 Score=65.61 Aligned_cols=93 Identities=23% Similarity=0.291 Sum_probs=70.8
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCH------------HHHhc--cCCEEE
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTM------------EYAKK--YGDIFV 870 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~------------~e~l~--~aDvvi 870 (1027)
...|++|+|.|.|.+|..+++.|+.+|++ |+++..++.+...+...|.+ +.+. .+... ..|+|+
T Consensus 160 ~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vl 239 (343)
T cd05285 160 VRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVI 239 (343)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEE
Confidence 36799999999999999999999999997 88888877776666666664 2211 11222 379999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
++.|....+ ...++.|++++.++.+|..+
T Consensus 240 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 268 (343)
T cd05285 240 ECTGAESCI-QTAIYATRPGGTVVLVGMGK 268 (343)
T ss_pred ECCCCHHHH-HHHHHHhhcCCEEEEEccCC
Confidence 999875433 35589999999999998654
No 481
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=95.99 E-value=0.029 Score=62.99 Aligned_cols=91 Identities=15% Similarity=0.096 Sum_probs=67.2
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHH----Hh--ccCCEEEecC
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEY----AK--KYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e----~l--~~aDvvi~at 873 (1027)
...|.+|+|.|. |.+|+.+++.++.+|++|+++..++.+.......|.+ +.+ ..+ .. ...|+|++++
T Consensus 137 ~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~ 216 (324)
T cd08292 137 VKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSV 216 (324)
T ss_pred CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECC
Confidence 357999999987 8899999999999999988875555454444445763 221 111 11 1489999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|... + .+.++.+++++.++.+|..
T Consensus 217 g~~~-~-~~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 217 GGKL-A-GELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred CChh-H-HHHHHhhcCCcEEEEEecC
Confidence 9753 3 4668999999999999864
No 482
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.99 E-value=0.034 Score=56.18 Aligned_cols=80 Identities=16% Similarity=0.049 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCCCcC-------CCCCCCCcEEEE
Q psy15208 89 ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAVKKW-------LIPEVPKNTIII 159 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~~~~-------~l~~i~~PvLiI 159 (1027)
....+...++.....++..+++++||||||.+|..++...+.. .....++..+++.... ........+..+
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i 89 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRI 89 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhhhccCCccEEEE
Confidence 4455556666666567888999999999999999999887652 2456677777664321 223344667788
Q ss_pred EeCCCCCCC
Q psy15208 160 HGELDEIIP 168 (1027)
Q Consensus 160 hG~~D~iVP 168 (1027)
+...|.+..
T Consensus 90 ~~~~D~v~~ 98 (153)
T cd00741 90 VNDNDIVPR 98 (153)
T ss_pred EECCCccCC
Confidence 888886643
No 483
>PRK06199 ornithine cyclodeaminase; Validated
Probab=95.99 E-value=0.035 Score=64.83 Aligned_cols=93 Identities=18% Similarity=0.134 Sum_probs=69.1
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CC-C-EEEEEcCCchhHHH-H----hhc-C---cE-EcCHHHHhccCCEEEecCCC
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LS-A-QVWIIEIDPICALQ-A----AME-G---FL-VVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~G-a-~ViV~d~dp~r~~~-A----~~~-G---~~-v~~~~e~l~~aDvvi~atG~ 875 (1027)
.-++++|+|+|..++..++.+.. +. . +|.|+++++.++.. + ... | +. +.+.++++.+||||++||.+
T Consensus 154 da~~l~iiG~G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s 233 (379)
T PRK06199 154 DSKVVGLLGPGVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSG 233 (379)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCC
Confidence 45899999999999999888876 42 4 79999999977653 1 111 3 33 34689999999999998853
Q ss_pred c-------ccCcHHHHhcCCCCeEEEEecCCCcccchh
Q psy15208 876 Y-------HVITHDHMRDMKDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 876 ~-------~vi~~~~~~~mk~gailvNvG~~d~eid~~ 906 (1027)
. .++..+ .+|+|+.+..+|.. |+|-.
T Consensus 234 ~~~~~s~~Pv~~~~---~lkpG~hv~~ig~~--eld~~ 266 (379)
T PRK06199 234 ETGDPSTYPYVKRE---WVKPGAFLLMPAAC--RIDEG 266 (379)
T ss_pred CCCCCCcCcEecHH---HcCCCcEEecCCcc--cCCHH
Confidence 2 566654 57899988888874 66644
No 484
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=95.98 E-value=0.02 Score=67.84 Aligned_cols=88 Identities=18% Similarity=0.109 Sum_probs=65.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCc-----------------EEcCHHHHhccCCEEEecC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGF-----------------LVVTMEYAKKYGDIFVTCT 873 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~-----------------~v~~~~e~l~~aDvvi~at 873 (1027)
-+|+|+|.|.+|...|..++. |-+|+++|+++.+..+.. .|. ...+..+++.++|++|.|.
T Consensus 7 mkI~vIGlGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~-~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~V 84 (425)
T PRK15182 7 VKIAIIGLGYVGLPLAVEFGK-SRQVVGFDVNKKRILELK-NGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIITV 84 (425)
T ss_pred CeEEEECcCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHH-CcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEEc
Confidence 579999999999999999877 789999999997765543 333 2333345678999999998
Q ss_pred CCc----------ccCc--HHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNY----------HVIT--HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~----------~vi~--~~~~~~mk~gailvNvG~~d 900 (1027)
+++ .+.. ....+.+++|.++|+.....
T Consensus 85 ptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~ 123 (425)
T PRK15182 85 PTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVY 123 (425)
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 876 2221 12246689999999987764
No 485
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.96 E-value=0.024 Score=62.59 Aligned_cols=86 Identities=10% Similarity=0.064 Sum_probs=61.5
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC---EEEEEcCCchhHHHHhh-c-CcEE-cCHHHHhccCCEEEecCCCcccCcHHHHh
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA---QVWIIEIDPICALQAAM-E-GFLV-VTMEYAKKYGDIFVTCTGNYHVITHDHMR 885 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~dp~r~~~A~~-~-G~~v-~~~~e~l~~aDvvi~atG~~~vi~~~~~~ 885 (1027)
+|+|+|+|.+|..+++.+...|- .|.++++++.++.+... . |..+ .+.++++.++|+|+.|+.... + .+.++
T Consensus 2 ~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p~~-~-~~vl~ 79 (258)
T PRK06476 2 KIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRPQI-A-EEVLR 79 (258)
T ss_pred eEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCHHH-H-HHHHH
Confidence 69999999999999999998774 36788888877655433 3 4654 467778889999999987432 2 22222
Q ss_pred c--CCCCeEEEEecCC
Q psy15208 886 D--MKDQAIVCNIGHF 899 (1027)
Q Consensus 886 ~--mk~gailvNvG~~ 899 (1027)
. ++++.+++.+...
T Consensus 80 ~l~~~~~~~vis~~ag 95 (258)
T PRK06476 80 ALRFRPGQTVISVIAA 95 (258)
T ss_pred HhccCCCCEEEEECCC
Confidence 2 4677777776644
No 486
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=95.93 E-value=0.033 Score=61.96 Aligned_cols=105 Identities=18% Similarity=0.050 Sum_probs=82.8
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cCcEEc------CHHHHh
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EGFLVV------TMEYAK 863 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G~~v~------~~~e~l 863 (1027)
++...+.++.+. +..-+|+||+|-++ |.+|.-+.+.+|..||||+.+--.+.+...... .||+.. ++.++|
T Consensus 134 pG~TAY~gLl~i-gqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L 212 (340)
T COG2130 134 PGLTAYFGLLDI-GQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQAL 212 (340)
T ss_pred chHHHHHHHHHh-cCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHH
Confidence 567777777765 55678999999985 789999999999999999998777776666665 787632 344444
Q ss_pred c-----cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 864 K-----YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 864 ~-----~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+ ..|+.++++|.. +++ ..|..|+..|+++-+|+-
T Consensus 213 ~~a~P~GIDvyfeNVGg~-v~D-Av~~~ln~~aRi~~CG~I 251 (340)
T COG2130 213 KEACPKGIDVYFENVGGE-VLD-AVLPLLNLFARIPVCGAI 251 (340)
T ss_pred HHHCCCCeEEEEEcCCch-HHH-HHHHhhccccceeeeeeh
Confidence 4 369999999886 345 559999999999999984
No 487
>KOG4230|consensus
Probab=95.93 E-value=0.02 Score=67.57 Aligned_cols=90 Identities=24% Similarity=0.305 Sum_probs=74.2
Q ss_pred hhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEe
Q psy15208 793 RESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVT 871 (1027)
Q Consensus 793 ~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~ 871 (1027)
-.++..-+. ..++.++||++||+|-.. +|.-++..|+-..+.|++|..- .-++.+.+..+|+||-
T Consensus 146 PkGcmeLlk-~a~v~v~Gk~aVVlGRS~IVG~Pia~LL~~~NaTVTiCHSK-------------T~~lae~v~~ADIvIv 211 (935)
T KOG4230|consen 146 PKGCMELLK-EAGVFVAGKNAVVLGRSKIVGSPIAALLLWANATVTICHSK-------------TRNLAEKVSRADIVIV 211 (935)
T ss_pred hHHHHHHHH-HcCCccccceeEEEecccccCChHHHHHHhcCceEEEecCC-------------CccHHHHhccCCEEEE
Confidence 345554444 446789999999999998 8999999999999999999542 2356778889999999
Q ss_pred cCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 872 CTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 872 atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|+|-++.+..+ ++|+|++++++|.-
T Consensus 212 AiG~PefVKgd---WiKpGavVIDvGIN 236 (935)
T KOG4230|consen 212 AIGQPEFVKGD---WIKPGAVVIDVGIN 236 (935)
T ss_pred EcCCcceeecc---cccCCcEEEEcccc
Confidence 99999987755 68999999999974
No 488
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.93 E-value=0.028 Score=57.40 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=58.0
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh--------cC------cE-EcCHHHHhccCCEEEecCCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM--------EG------FL-VVTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~--------~G------~~-v~~~~e~l~~aDvvi~atG~~ 876 (1027)
+|.|+|.|..|.++|..+...|-+|+++.+++.....-.. .+ .. ..+++++++.+|+|+-++.+.
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs~ 80 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPSQ 80 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-GG
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccHH
Confidence 6899999999999999999999999999998743332111 11 11 345889999999999988765
Q ss_pred cc--CcHHHHhcCCCCeEEEEecC
Q psy15208 877 HV--ITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 877 ~v--i~~~~~~~mk~gailvNvG~ 898 (1027)
.. +-++.-..++++..++++.-
T Consensus 81 ~~~~~~~~l~~~l~~~~~ii~~~K 104 (157)
T PF01210_consen 81 AHREVLEQLAPYLKKGQIIISATK 104 (157)
T ss_dssp GHHHHHHHHTTTSHTT-EEEETS-
T ss_pred HHHHHHHHHhhccCCCCEEEEecC
Confidence 31 11122344567777777653
No 489
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=95.92 E-value=0.026 Score=63.27 Aligned_cols=92 Identities=12% Similarity=0.086 Sum_probs=70.7
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------ccCCEEEecC
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------KYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------~~aDvvi~at 873 (1027)
...|.+|+|.|. |.+|+.+++.++++|++|+++..++.+...+...|++ +.+ ..+.+ ...|+|++++
T Consensus 136 ~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 215 (323)
T cd05282 136 LPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAV 215 (323)
T ss_pred CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECC
Confidence 357999999987 7899999999999999999987777676667667763 222 11111 2479999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|+... ...++.++++|+++++|..+
T Consensus 216 g~~~~--~~~~~~l~~~g~~v~~g~~~ 240 (323)
T cd05282 216 GGESA--TRLARSLRPGGTLVNYGLLS 240 (323)
T ss_pred CCHHH--HHHHHhhCCCCEEEEEccCC
Confidence 98753 35588999999999998653
No 490
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=95.84 E-value=0.029 Score=59.79 Aligned_cols=88 Identities=23% Similarity=0.149 Sum_probs=64.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH--HhhcC--cEEcCHHHHhccCCEEEecCCCcccC--cHHHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ--AAMEG--FLVVTMEYAKKYGDIFVTCTGNYHVI--THDHM 884 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~--A~~~G--~~v~~~~e~l~~aDvvi~atG~~~vi--~~~~~ 884 (1027)
++++|+|.|+||.++|.++...|-+|++--++..+... +...+ ++..+.+++.+.+|||+-+..-..+. .++..
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~~~l~ 81 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVLAELR 81 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHHHHHH
Confidence 57899999999999999999999999998555544443 22233 33567889999999999988754322 22333
Q ss_pred hcCCCCeEEEEecCC
Q psy15208 885 RDMKDQAIVCNIGHF 899 (1027)
Q Consensus 885 ~~mk~gailvNvG~~ 899 (1027)
+.+. |-++|.+.-.
T Consensus 82 ~~~~-~KIvID~tnp 95 (211)
T COG2085 82 DALG-GKIVIDATNP 95 (211)
T ss_pred HHhC-CeEEEecCCC
Confidence 4455 8889888765
No 491
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=95.80 E-value=0.029 Score=63.61 Aligned_cols=93 Identities=15% Similarity=0.117 Sum_probs=69.3
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHh-CCCEEEEEcCCchhHHHHhhcCcE-EcCH------HHHh----ccCCEEEecCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRA-LSAQVWIIEIDPICALQAAMEGFL-VVTM------EYAK----KYGDIFVTCTG 874 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~-~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~------~e~l----~~aDvvi~atG 874 (1027)
...|++|+|.|.|.+|..+++.++. +|++|++++.++.+...+...|++ +.+. .+.+ ...|+++.+++
T Consensus 160 ~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~ 239 (338)
T PRK09422 160 IKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAV 239 (338)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCcEEEEeCC
Confidence 3579999999999999999999998 599999999888888877777764 2221 1112 23675555555
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
....+ .+.++.++.++.++.+|...
T Consensus 240 ~~~~~-~~~~~~l~~~G~~v~~g~~~ 264 (338)
T PRK09422 240 AKAAF-NQAVDAVRAGGRVVAVGLPP 264 (338)
T ss_pred CHHHH-HHHHHhccCCCEEEEEeeCC
Confidence 55544 45589999999999998653
No 492
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.79 E-value=0.021 Score=67.91 Aligned_cols=68 Identities=24% Similarity=0.263 Sum_probs=51.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHH-----HHhhcCcEEcC---HHHHhccCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL-----QAAMEGFLVVT---MEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~-----~A~~~G~~v~~---~~e~l~~aDvvi~atG~ 875 (1027)
+.+|+|+|+|.|.+|+.+|+.|+..|++|+++|.++.... +....|.++.. .++....+|+||.++|.
T Consensus 3 ~~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 3 LKGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGV 78 (450)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCC
Confidence 5799999999999999999999999999999998752221 12233655432 33445679999988874
No 493
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=95.78 E-value=0.026 Score=67.64 Aligned_cols=88 Identities=10% Similarity=0.009 Sum_probs=66.3
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc----CcE---EcCHHHHhc---cCCEEEecCCC----c
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME----GFL---VVTMEYAKK---YGDIFVTCTGN----Y 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~----G~~---v~~~~e~l~---~aDvvi~atG~----~ 876 (1027)
.+|+|+|.|..|..+|+.+...|-+|.++|+++.+....... |.. ..++++++. .+|+|+.+... .
T Consensus 2 ~~IgvIGLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v~ 81 (470)
T PTZ00142 2 SDIGLIGLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAVD 81 (470)
T ss_pred CEEEEEeEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHHH
Confidence 379999999999999999999999999999999775543332 532 346777775 48977765322 2
Q ss_pred ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.++ .+.+..|++|.++++.|-.
T Consensus 82 ~vi-~~l~~~L~~g~iIID~gn~ 103 (470)
T PTZ00142 82 ETI-DNLLPLLEKGDIIIDGGNE 103 (470)
T ss_pred HHH-HHHHhhCCCCCEEEECCCC
Confidence 344 3446778999999999875
No 494
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.77 E-value=0.041 Score=61.52 Aligned_cols=87 Identities=7% Similarity=0.028 Sum_probs=62.4
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCC----CEEEEEcCCch-hHHH-HhhcCcEEc-CHHHHhccCCEEEecCCCcccCc--
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALS----AQVWIIEIDPI-CALQ-AAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVIT-- 880 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~G----a~ViV~d~dp~-r~~~-A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~-- 880 (1027)
+.++++||+|.+|..+|+.+...| -+|+++++++. +... +...|+.+. +..+++..+|+||.|+....+..
T Consensus 3 ~mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~vl 82 (279)
T PRK07679 3 IQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAEAL 82 (279)
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHHHH
Confidence 458999999999999999999888 57999988764 3333 233477643 56777889999999986543211
Q ss_pred HHHHhcCCCCeEEEEe
Q psy15208 881 HDHMRDMKDQAIVCNI 896 (1027)
Q Consensus 881 ~~~~~~mk~gailvNv 896 (1027)
.+....++++.+++.+
T Consensus 83 ~~l~~~~~~~~liIs~ 98 (279)
T PRK07679 83 IPFKEYIHNNQLIISL 98 (279)
T ss_pred HHHHhhcCCCCEEEEE
Confidence 1222346678888886
No 495
>PRK13529 malate dehydrogenase; Provisional
Probab=95.77 E-value=0.24 Score=59.98 Aligned_cols=125 Identities=16% Similarity=0.230 Sum_probs=87.9
Q ss_pred cccchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHh----CCC-------EEEEEcCCc--------
Q psy15208 786 FDNLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRA----LSA-------QVWIIEIDP-------- 843 (1027)
Q Consensus 786 ~dn~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~----~Ga-------~ViV~d~dp-------- 843 (1027)
.|...||+-....++.. .++..+...+++++|+|.-|.++|+.+.. .|. ++.++|..-
T Consensus 268 nDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~ 347 (563)
T PRK13529 268 NDDIQGTGAVTLAGLLAALKITGEPLSDQRIVFLGAGSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPD 347 (563)
T ss_pred ccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCc
Confidence 46778998876666543 55777899999999999999999998886 587 788876642
Q ss_pred ---hhHHHHhhcCc--------EEcCHHHHhccC--CEEEecCCCcccCcHHHHhcCCC---CeEEEEecCCC--cccch
Q psy15208 844 ---ICALQAAMEGF--------LVVTMEYAKKYG--DIFVTCTGNYHVITHDHMRDMKD---QAIVCNIGHFD--NEIEV 905 (1027)
Q Consensus 844 ---~r~~~A~~~G~--------~v~~~~e~l~~a--Dvvi~atG~~~vi~~~~~~~mk~---gailvNvG~~d--~eid~ 905 (1027)
.+...|....- ...++.++++.+ |++|-+++..++++++.++.|.. .-++.-.+-.. .|+..
T Consensus 348 l~~~k~~fa~~~~~~~~~~~~~~~~~L~e~v~~~kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aE~tp 427 (563)
T PRK13529 348 LLDFQKPYARKREELADWDTEGDVISLLEVVRNVKPTVLIGVSGQPGAFTEEIVKEMAAHCERPIIFPLSNPTSRAEATP 427 (563)
T ss_pred chHHHHHHhhhcccccccccccCCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCcCCCcccCH
Confidence 22223433210 114788999877 99999998788999999999976 55554443332 26665
Q ss_pred hhhhc
Q psy15208 906 EKLKK 910 (1027)
Q Consensus 906 ~~l~~ 910 (1027)
+....
T Consensus 428 e~a~~ 432 (563)
T PRK13529 428 EDLIA 432 (563)
T ss_pred HHHHH
Confidence 54433
No 496
>KOG0089|consensus
Probab=95.76 E-value=0.03 Score=61.07 Aligned_cols=104 Identities=22% Similarity=0.237 Sum_probs=75.1
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.++|.-+.| +++.+.||+++|+|--. +|+-+|..|+.-|+++.=.|..-..- ...+-..-.++....++|++
T Consensus 148 cTP~gv~eiL~r-~gI~~~GKn~VVigRS~iVg~P~A~LL~~dG~~~~~~~datVti---~hr~t~~~~lk~ht~~adiv 223 (309)
T KOG0089|consen 148 CTPLGVVEILER-TGIETYGKNAVVIGRSKIVGMPLALLLHNDGAHVYSVDDATVTI---FHRYTSKPQLKHHTRDADIV 223 (309)
T ss_pred CchHHHHHHHHH-hCCeecCceEEEEcccccccchHHHHHhhcCCcccccCcceEEE---EEcCCCchhHHHHHHhccee
Confidence 456778877766 48889999999999998 89999999999987665432211000 00000011234556789999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
|.+.|-+++|+.+ .+|+|+.++|+|.-.+
T Consensus 224 i~a~g~p~li~~d---~Ik~Ga~vidvgin~v 252 (309)
T KOG0089|consen 224 ISAVGIPNLITSD---MIKPGAAVIDVGINRV 252 (309)
T ss_pred ehhcCCCcccccc---eeecCceeEecCCCcc
Confidence 9999999999866 5799999999998643
No 497
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=95.75 E-value=0.036 Score=61.53 Aligned_cols=94 Identities=15% Similarity=0.166 Sum_probs=71.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCC----CEEEEEcCCchhHH-HHhhcCcE-EcCHHHHhccCCEEEecCCCcccCcHHHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALS----AQVWIIEIDPICAL-QAAMEGFL-VVTMEYAKKYGDIFVTCTGNYHVITHDHM 884 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~G----a~ViV~d~dp~r~~-~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~~~~~ 884 (1027)
.++++||+|.+|..++..+...| .+|+|+++++.++. .+...|.. ..+..++..++|+||.|.--. .-.+.+
T Consensus 2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~~~~~~~~~~~~advv~LavKPq--~~~~vl 79 (266)
T COG0345 2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVVTTTDNQEAVEEADVVFLAVKPQ--DLEEVL 79 (266)
T ss_pred ceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcCCcccCcHHHHHhhCCEEEEEeChH--hHHHHH
Confidence 47999999999999999999999 48999999998775 67777777 445667788999999987332 334557
Q ss_pred hcCC---CCeEEEEecCCCcccchhhhh
Q psy15208 885 RDMK---DQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 885 ~~mk---~gailvNvG~~d~eid~~~l~ 909 (1027)
+.++ ++.+++.+.-. +.++.+.
T Consensus 80 ~~l~~~~~~~lvISiaAG---v~~~~l~ 104 (266)
T COG0345 80 SKLKPLTKDKLVISIAAG---VSIETLE 104 (266)
T ss_pred HHhhcccCCCEEEEEeCC---CCHHHHH
Confidence 7777 57788877654 4444444
No 498
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=95.75 E-value=0.029 Score=62.41 Aligned_cols=83 Identities=14% Similarity=0.109 Sum_probs=58.3
Q ss_pred EEEEEcCChhHHHHHHHHHhC--CCE-EEEEcCCchhHHHHh-hcCcE-EcCHHHHhccCCEEEecCCCcccCcHHHHhc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRAL--SAQ-VWIIEIDPICALQAA-MEGFL-VVTMEYAKKYGDIFVTCTGNYHVITHDHMRD 886 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~--Ga~-ViV~d~dp~r~~~A~-~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~ 886 (1027)
+|+|+|+|.||+.+++.+... +.+ +.++|+++.+...+. ..|.. ..++++.+.++|+|+.|++... ...-....
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~~~~~~ell~~~DvVvi~a~~~~-~~~~~~~a 81 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKACLSIDELVEDVDLVVECASVNA-VEEVVPKS 81 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCeeECCHHHHhcCCCEEEEcCChHH-HHHHHHHH
Confidence 799999999999999988875 465 667899987665433 34444 4568888888999999987543 33333445
Q ss_pred CCCCeEEEE
Q psy15208 887 MKDQAIVCN 895 (1027)
Q Consensus 887 mk~gailvN 895 (1027)
|+.|.-++.
T Consensus 82 l~~Gk~Vvv 90 (265)
T PRK13304 82 LENGKDVII 90 (265)
T ss_pred HHcCCCEEE
Confidence 665544443
No 499
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=95.72 E-value=0.049 Score=60.99 Aligned_cols=91 Identities=13% Similarity=0.027 Sum_probs=71.3
Q ss_pred ccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHH----h--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYA----K--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~----l--~~aDvvi~atG 874 (1027)
..|.+|+|.| .|.+|..+++.++.+|++|++++.++.+...+...|.+ +.+ ..+. . ...|++++++|
T Consensus 141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 220 (324)
T cd08244 141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVG 220 (324)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCC
Confidence 4689999999 59999999999999999999998888777766666653 221 1111 1 24899999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
... . ...++.|+.++.++++|..+
T Consensus 221 ~~~-~-~~~~~~l~~~g~~v~~g~~~ 244 (324)
T cd08244 221 GAI-G-RAALALLAPGGRFLTYGWAS 244 (324)
T ss_pred hHh-H-HHHHHHhccCcEEEEEecCC
Confidence 774 3 56789999999999998753
No 500
>PLN02633 palmitoyl protein thioesterase family protein
Probab=95.69 E-value=0.06 Score=60.59 Aligned_cols=106 Identities=13% Similarity=0.051 Sum_probs=69.1
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CCcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYP-YLPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~-~~pv 109 (1027)
+.| +|+.||.|....+. ....+.+.+.. .|.-+.++.. |-+...+. +..+-+.++.+.+.+..... ..-+
T Consensus 25 ~~P-~ViwHG~GD~c~~~---g~~~~~~l~~~~~g~~~~~i~i-g~~~~~s~---~~~~~~Qve~vce~l~~~~~l~~G~ 96 (314)
T PLN02633 25 SVP-FIMLHGIGTQCSDA---TNANFTQLLTNLSGSPGFCLEI-GNGVGDSW---LMPLTQQAEIACEKVKQMKELSQGY 96 (314)
T ss_pred CCC-eEEecCCCcccCCc---hHHHHHHHHHhCCCCceEEEEE-CCCccccc---eeCHHHHHHHHHHHHhhchhhhCcE
Confidence 345 57789997655443 35556665544 2666666655 33322222 23355666777777765211 1249
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.++|||+||.++-.++.+.|+.+.|+-+|.++++..
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 999999999999999999987457999999987643
Done!