Query psy1521
Match_columns 175
No_of_seqs 218 out of 1547
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 23:31:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1521.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1521hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xkx_A Disks large homolog 4; 99.9 7.8E-22 2.7E-26 172.9 18.3 172 2-174 95-340 (721)
2 3gsl_A Disks large homolog 4; 99.9 4.8E-22 1.6E-26 148.0 11.9 93 2-94 41-181 (196)
3 3r0h_A INAD, inactivation-NO-a 99.9 9.3E-22 3.2E-26 148.0 11.0 93 2-94 51-187 (206)
4 1p1d_A PDZ45, glutamate recept 99.8 1.3E-18 4.4E-23 130.1 11.8 93 2-94 42-186 (196)
5 2qt5_A Glutamate receptor-inte 99.8 1.4E-18 4.8E-23 130.1 11.9 93 2-94 39-186 (200)
6 3suz_A Amyloid beta A4 precurs 99.8 1.1E-19 3.7E-24 149.1 4.1 92 2-94 238-365 (388)
7 3rle_A Golgi reassembly-stacki 99.7 1E-16 3.5E-21 121.0 11.5 123 2-162 22-199 (209)
8 1w9e_A Syntenin 1; cell adhesi 99.7 1.9E-16 6.4E-21 115.4 11.6 91 2-94 33-157 (166)
9 2xkx_A Disks large homolog 4; 99.7 1.6E-16 5.3E-21 139.4 12.6 93 2-94 190-382 (721)
10 4a8c_A Periplasmic PH-dependen 99.6 2.5E-15 8.6E-20 124.8 12.6 89 2-94 269-411 (436)
11 3r0h_A INAD, inactivation-NO-a 99.6 6E-15 2.1E-19 110.6 12.8 99 43-174 45-145 (206)
12 3gsl_A Disks large homolog 4; 99.6 6.7E-15 2.3E-19 109.1 12.4 100 43-175 35-140 (196)
13 3pv2_A DEGQ; trypsin fold, PDZ 99.6 3.7E-15 1.3E-19 124.3 11.2 89 2-94 288-434 (451)
14 1p1d_A PDZ45, glutamate recept 99.5 6.4E-14 2.2E-18 104.4 11.4 104 44-174 37-144 (196)
15 2qt5_A Glutamate receptor-inte 99.5 9.3E-14 3.2E-18 103.7 12.1 102 43-174 33-144 (200)
16 4amh_A Disks large homolog 1; 99.5 1.6E-13 5.4E-18 92.8 9.6 73 43-148 32-104 (106)
17 3gge_A PDZ domain-containing p 99.5 1.2E-13 4.1E-18 91.1 7.6 51 44-94 29-79 (95)
18 1r6j_A Syntenin 1; PDZ, membra 99.5 9.6E-14 3.3E-18 89.6 6.2 48 46-94 26-73 (82)
19 3e17_A Tight junction protein 99.4 2E-13 6.8E-18 89.2 6.8 51 44-94 22-72 (88)
20 1ky9_A Protease DO, DEGP, HTRA 99.4 3.2E-14 1.1E-18 118.5 2.9 87 2-94 292-431 (448)
21 1w9e_A Syntenin 1; cell adhesi 99.4 3.9E-12 1.3E-16 92.4 12.5 90 43-174 27-116 (166)
22 3cbz_A Dishevelled-2; PDZ doma 99.4 5.8E-13 2E-17 90.3 7.5 49 43-91 33-81 (108)
23 3b76_A E3 ubiquitin-protein li 99.4 3.8E-13 1.3E-17 92.7 6.5 52 43-94 53-104 (118)
24 1ujd_A KIAA0559 protein; PDZ d 99.4 7.4E-13 2.5E-17 91.0 7.7 51 44-94 50-100 (117)
25 1wi4_A Synip, syntaxin binding 99.4 5.5E-13 1.9E-17 90.6 6.6 49 44-92 42-90 (109)
26 2la8_A Inactivation-NO-after-p 99.4 1.3E-12 4.4E-17 88.3 7.9 52 43-94 25-76 (106)
27 2qg1_A Multiple PDZ domain pro 99.4 1.2E-12 4.1E-17 85.9 7.3 52 43-94 29-80 (92)
28 2qkv_A Inactivation-NO-after-p 99.4 8.2E-13 2.8E-17 87.6 6.2 52 43-94 31-82 (96)
29 2vwr_A Ligand of NUMB protein 99.4 1.5E-12 5E-17 86.0 7.3 52 43-94 29-80 (95)
30 2d92_A INAD-like protein; PDZ 99.4 1E-12 3.5E-17 88.9 6.6 52 43-94 44-95 (108)
31 1wg6_A Hypothetical protein (r 99.4 5.4E-13 1.9E-17 93.0 5.1 48 44-91 56-103 (127)
32 2byg_A Channel associated prot 99.4 1.2E-12 4.2E-17 89.9 6.8 52 43-94 54-105 (117)
33 3egg_C Spinophilin; PP1, serin 99.4 9.1E-13 3.1E-17 96.3 6.5 51 44-94 112-162 (170)
34 3o46_A Maguk P55 subfamily mem 99.4 1.4E-12 4.7E-17 85.9 6.6 52 43-94 28-79 (93)
35 1wf8_A Neurabin-I; PDZ domain, 99.4 1.3E-12 4.5E-17 88.2 6.6 52 43-94 40-91 (107)
36 1wfg_A Regulating synaptic mem 99.4 1.4E-12 4.9E-17 91.3 7.0 49 44-92 66-114 (131)
37 1d5g_A Human phosphatase HPTP1 99.4 2.4E-12 8.2E-17 85.1 7.7 52 43-94 33-84 (96)
38 2fne_A Multiple PDZ domain pro 99.4 2.1E-12 7.1E-17 88.8 7.4 51 44-94 54-104 (117)
39 1i16_A Interleukin 16, LCF; cy 99.3 1.3E-12 4.4E-17 91.4 6.3 51 44-94 58-108 (130)
40 1v62_A KIAA1719 protein; struc 99.3 1.4E-12 4.7E-17 89.6 6.2 51 44-94 43-93 (117)
41 2pa1_A PDZ and LIM domain prot 99.3 3.4E-12 1.2E-16 82.9 7.8 51 43-94 26-76 (87)
42 2awx_A Synapse associated prot 99.3 2.3E-12 8E-17 86.7 7.2 52 43-94 33-84 (105)
43 2iwo_A Multiple PDZ domain pro 99.3 1.6E-12 5.6E-17 89.7 6.6 51 44-94 54-104 (120)
44 1kwa_A Hcask/LIN-2 protein; PD 99.3 1.9E-12 6.5E-17 84.5 6.6 51 43-94 25-76 (88)
45 3axa_A Afadin, nectin-3, prote 99.3 2.3E-12 7.8E-17 86.8 7.1 52 43-94 38-89 (106)
46 1uhp_A Hypothetical protein KI 99.3 3.8E-12 1.3E-16 85.9 8.3 52 43-94 41-92 (107)
47 2i1n_A Discs, large homolog 3; 99.3 2.4E-12 8.1E-17 86.1 7.1 52 43-94 34-85 (102)
48 2g5m_B Neurabin-2; spinophilin 99.3 1.6E-12 5.5E-17 88.6 6.3 52 43-94 35-86 (113)
49 1rgw_A ZAsp protein; PDZ, cyph 99.3 2.7E-12 9.2E-17 82.9 6.8 51 43-94 25-75 (85)
50 2q3g_A PDZ and LIM domain prot 99.3 2.6E-12 8.8E-17 83.8 6.7 50 44-94 28-77 (89)
51 2ehr_A INAD-like protein; PDZ 99.3 4.9E-12 1.7E-16 86.7 8.3 52 43-94 50-101 (117)
52 1uep_A Membrane associated gua 99.3 2.2E-12 7.4E-17 86.6 6.4 52 43-94 34-87 (103)
53 2fe5_A Presynaptic protein SAP 99.3 3.6E-12 1.2E-16 83.9 7.3 52 43-94 33-84 (94)
54 2ejy_A 55 kDa erythrocyte memb 99.3 1.7E-12 5.8E-17 86.4 5.7 52 43-94 36-87 (97)
55 2jil_A GRIP1 protein, glutamat 99.3 2.7E-12 9.3E-17 85.0 6.7 52 43-94 32-83 (97)
56 2he4_A Na(+)/H(+) exchange reg 99.3 3.3E-12 1.1E-16 83.5 7.0 51 43-94 28-78 (90)
57 2uzc_A Human pdlim5, PDZ and L 99.3 4.3E-12 1.5E-16 82.5 7.5 50 44-94 28-77 (88)
58 1wha_A KIAA0147 protein, scrib 99.3 2.8E-12 9.7E-17 86.3 6.7 52 43-94 38-89 (105)
59 2jik_A Synaptojanin-2 binding 99.3 3.9E-12 1.3E-16 84.9 7.3 52 43-94 37-88 (101)
60 2opg_A Multiple PDZ domain pro 99.3 4.3E-12 1.5E-16 84.2 7.5 52 43-94 30-81 (98)
61 2yt7_A Amyloid beta A4 precurs 99.3 5E-12 1.7E-16 84.5 7.7 48 44-91 38-85 (101)
62 1n7e_A AMPA receptor interacti 99.3 4.2E-12 1.4E-16 84.2 7.2 52 43-94 30-81 (97)
63 2i04_A Membrane-associated gua 99.3 4.6E-12 1.6E-16 81.9 7.2 49 44-92 26-74 (85)
64 2fcf_A Multiple PDZ domain pro 99.3 6.2E-12 2.1E-16 84.1 7.9 52 43-94 39-90 (103)
65 3l4f_D SH3 and multiple ankyri 99.3 5.1E-12 1.7E-16 88.6 7.7 50 44-94 66-115 (132)
66 1ihj_A INAD; intermolecular di 99.3 3.6E-12 1.2E-16 84.5 6.6 51 44-94 38-88 (98)
67 2f5y_A Regulator of G-protein 99.3 4.4E-12 1.5E-16 83.1 6.8 50 44-94 25-74 (91)
68 1m5z_A GRIP, AMPA receptor int 99.3 5E-12 1.7E-16 82.7 7.1 51 43-94 32-82 (91)
69 1nf3_C PAR-6B; semi-CRIB motif 99.3 4.9E-12 1.7E-16 88.2 7.4 51 44-94 66-116 (128)
70 2db5_A INAD-like protein; PDZ 99.3 3.1E-12 1.1E-16 89.1 6.4 51 44-94 55-106 (128)
71 2kv8_A RGS12, regulator of G-p 99.3 3E-12 1E-16 82.4 5.7 50 44-94 24-73 (83)
72 2iwq_A Multiple PDZ domain pro 99.3 7E-12 2.4E-16 86.9 7.9 52 43-94 59-110 (123)
73 3khf_A Microtubule-associated 99.3 5.3E-12 1.8E-16 83.9 7.0 50 44-94 35-84 (99)
74 1qav_A Alpha-1 syntrophin (res 99.3 4.7E-12 1.6E-16 82.8 6.6 52 43-94 30-81 (90)
75 3nfk_A Tyrosine-protein phosph 99.3 4.3E-12 1.5E-16 85.6 6.5 50 44-93 44-94 (107)
76 3hpk_A Protein interacting wit 99.3 5E-12 1.7E-16 87.7 7.0 51 44-94 46-96 (125)
77 2pkt_A PDZ and LIM domain prot 99.3 5.9E-12 2E-16 82.4 7.0 51 43-94 27-77 (91)
78 2v90_A PDZ domain-containing p 99.3 5.7E-12 2E-16 83.3 6.9 50 44-94 31-80 (96)
79 2q9v_A Membrane-associated gua 99.3 2.4E-12 8.2E-17 84.1 5.0 50 44-93 28-77 (90)
80 4e34_A Golgi-associated PDZ an 99.3 5.2E-12 1.8E-16 82.0 6.5 50 44-94 29-79 (87)
81 1q7x_A PDZ2B domain of PTP-BAS 99.3 3E-12 1E-16 86.5 5.5 52 43-94 42-93 (108)
82 2dc2_A GOPC, golgi associated 99.3 4.3E-12 1.5E-16 85.2 6.2 50 44-94 36-86 (103)
83 1um1_A KIAA1849 protein, RSGI 99.3 5.6E-12 1.9E-16 85.4 6.9 52 43-94 36-87 (110)
84 2daz_A INAD-like protein; PDZ 99.3 3.8E-12 1.3E-16 88.2 6.1 52 43-94 51-102 (124)
85 2o2t_A Multiple PDZ domain pro 99.3 3.3E-12 1.1E-16 87.5 5.5 52 43-94 49-101 (117)
86 2djt_A Unnamed protein product 99.3 7E-12 2.4E-16 84.1 7.0 52 43-94 38-89 (104)
87 2r4h_A Membrane-associated gua 99.3 8.7E-12 3E-16 84.9 7.4 52 43-94 49-100 (112)
88 1ueq_A Membrane associated gua 99.3 8.9E-12 3E-16 86.2 7.6 50 43-92 44-93 (123)
89 1mfg_A ERB-B2 interacting prot 99.3 1.1E-11 3.6E-16 81.8 7.6 50 43-94 35-84 (95)
90 2dlu_A INAD-like protein; PDZ 99.3 4.7E-12 1.6E-16 86.0 6.0 52 43-94 38-89 (111)
91 2eno_A Synaptojanin-2-binding 99.3 6.2E-12 2.1E-16 86.6 6.5 52 43-94 47-98 (120)
92 2dkr_A LIN-7 homolog B; LIN-7B 99.3 7.9E-12 2.7E-16 82.0 6.8 52 43-94 30-81 (93)
93 2e7k_A Maguk P55 subfamily mem 99.3 1.2E-11 4.2E-16 81.1 7.7 51 43-94 29-79 (91)
94 2kpk_A Membrane-associated gua 99.3 8.2E-12 2.8E-16 87.2 7.1 49 44-92 44-92 (129)
95 2ego_A General receptor for ph 99.3 9.8E-12 3.4E-16 82.2 7.1 51 43-94 37-87 (96)
96 3i4w_A Disks large homolog 4; 99.3 8.3E-12 2.8E-16 83.6 6.8 52 43-94 35-86 (104)
97 3cyy_A Tight junction protein 99.3 1.1E-11 3.7E-16 81.2 7.2 52 43-94 23-74 (92)
98 1ufx_A KIAA1526 protein; PDZ d 99.3 4.8E-12 1.7E-16 85.0 5.5 47 45-91 34-80 (103)
99 2jre_A C60-1 PDZ domain peptid 99.3 5.9E-12 2E-16 85.0 5.9 52 43-94 44-95 (108)
100 1wi2_A Riken cDNA 2700099C19; 99.3 1.2E-11 4.2E-16 83.0 7.4 50 43-94 41-90 (104)
101 2eeg_A PDZ and LIM domain prot 99.3 9.7E-12 3.3E-16 82.0 6.7 51 43-94 32-82 (94)
102 3r68_A Na(+)/H(+) exchange reg 99.3 6.8E-12 2.3E-16 82.7 5.9 50 44-94 30-79 (95)
103 1uju_A Scribble; PDZ domain, c 99.3 2.7E-12 9.1E-17 87.2 4.0 52 43-94 44-95 (111)
104 1q3o_A Shank1; PDZ, GKAP, pept 99.3 1.2E-11 4.2E-16 83.6 7.1 50 44-94 46-95 (109)
105 3sfj_A TAX1-binding protein 3; 99.3 1.4E-11 4.9E-16 82.5 7.4 51 43-94 45-95 (104)
106 3qe1_A Sorting nexin-27, G pro 99.3 1.3E-11 4.6E-16 83.1 7.2 50 44-94 44-93 (107)
107 2dm8_A INAD-like protein; PDZ 99.3 9E-12 3.1E-16 85.2 6.4 52 43-94 43-94 (116)
108 2koj_A Partitioning defective 99.3 1.3E-11 4.6E-16 83.7 7.2 49 43-91 39-87 (111)
109 1vb7_A PDZ and LIM domain 2; P 99.3 7.8E-12 2.7E-16 82.4 5.8 51 43-94 30-80 (94)
110 2dls_A PDZ-rhogef, RHO guanine 99.3 2.3E-11 8E-16 80.0 8.1 50 43-94 29-78 (93)
111 1g9o_A NHE-RF; PDZ domain, com 99.3 1.9E-11 6.4E-16 80.0 7.6 51 43-94 27-77 (91)
112 2vsp_A PDZ domain-containing p 99.3 4.6E-12 1.6E-16 83.0 4.6 51 43-94 27-77 (91)
113 3ngh_A PDZ domain-containing p 99.3 7.7E-12 2.6E-16 84.2 5.8 51 43-94 26-76 (106)
114 2w4f_A Protein LAP4; structura 99.3 1.8E-11 6.2E-16 80.9 7.5 51 43-94 34-84 (97)
115 2rcz_A Tight junction protein 99.2 1.5E-11 5E-16 78.5 6.7 52 43-94 21-72 (81)
116 1v6b_A Harmonin isoform A1; st 99.2 7.2E-12 2.4E-16 86.2 5.5 48 44-91 44-91 (118)
117 1va8_A Maguk P55 subfamily mem 99.2 1.4E-11 4.8E-16 84.0 6.8 51 43-94 48-99 (113)
118 2dmz_A INAD-like protein; PDZ 99.2 1.1E-11 3.8E-16 86.4 6.2 52 43-94 46-97 (129)
119 1x6d_A Interleukin-16; PDZ dom 99.2 1.1E-11 3.7E-16 85.2 5.9 52 43-94 42-93 (119)
120 2d90_A PDZ domain containing p 99.2 1.7E-11 5.6E-16 82.0 6.7 51 43-94 30-80 (102)
121 1x5q_A LAP4 protein; PDZ domai 99.2 2.5E-11 8.6E-16 82.2 7.6 51 43-94 46-96 (110)
122 1uew_A Membrane associated gua 99.2 2.8E-11 9.7E-16 82.5 7.9 50 44-94 44-94 (114)
123 1wfv_A Membrane associated gua 99.2 5.1E-12 1.8E-16 84.5 4.0 51 44-94 37-87 (103)
124 3suz_A Amyloid beta A4 precurs 99.2 2.9E-12 9.8E-17 105.0 3.3 91 44-174 233-324 (388)
125 1y7n_A Amyloid beta A4 precurs 99.2 1.5E-11 5.2E-16 80.6 6.2 48 46-94 34-81 (90)
126 2eeh_A PDZ domain-containing p 99.2 2.9E-11 1E-15 80.5 7.5 51 42-94 35-85 (100)
127 1n7t_A 99-MER peptide of densi 99.2 1.5E-11 5E-16 82.4 6.1 50 43-94 43-92 (103)
128 2iwn_A Multiple PDZ domain pro 99.2 2.1E-11 7.1E-16 80.5 6.6 52 43-94 33-84 (97)
129 2jxo_A Ezrin-radixin-moesin-bi 99.2 2E-11 6.8E-16 81.0 6.5 51 43-94 33-83 (98)
130 1whd_A RGS3, regulator of G-pr 99.2 9E-12 3.1E-16 83.1 4.8 51 43-94 36-86 (100)
131 2edz_A PDZ domain-containing p 99.2 1.3E-11 4.6E-16 84.2 5.8 51 43-94 38-88 (114)
132 2kom_A Partitioning defective 99.2 2.6E-11 8.8E-16 83.7 7.3 49 43-91 58-106 (121)
133 2cs5_A Tyrosine-protein phosph 99.2 1.1E-11 3.8E-16 85.1 5.4 49 44-93 42-92 (119)
134 2vsv_A Rhophilin-2; scaffold p 99.2 3.6E-11 1.2E-15 81.6 7.7 50 44-94 45-94 (109)
135 1wf7_A Enigma homologue protei 99.2 1.2E-11 4.1E-16 82.8 5.3 50 44-94 30-79 (103)
136 1wif_A RSGI RUH-020, riken cDN 99.2 1.2E-11 4E-16 86.1 5.0 49 43-91 49-97 (126)
137 2edv_A FERM and PDZ domain-con 99.2 1.3E-11 4.5E-16 81.7 4.7 50 43-94 31-80 (96)
138 2vz5_A TAX1-binding protein 3; 99.2 4.1E-11 1.4E-15 84.7 7.3 49 43-92 64-112 (139)
139 1v5l_A PDZ and LIM domain 3; a 99.2 1.5E-11 5.2E-16 82.4 4.9 50 44-94 30-79 (103)
140 2qbw_A PDZ-fibronectin fusion 99.2 9.2E-11 3.1E-15 86.9 9.4 50 43-94 24-73 (195)
141 3rle_A Golgi reassembly-stacki 99.2 1.7E-10 5.8E-15 86.8 10.9 96 44-175 17-122 (209)
142 2eei_A PDZ domain-containing p 99.2 1.5E-11 5.1E-16 82.7 4.6 51 43-94 32-82 (106)
143 3tsv_A Tight junction protein 99.2 5.3E-11 1.8E-15 82.5 7.0 47 43-90 51-97 (124)
144 2edp_A Fragment, shroom family 99.2 2.2E-11 7.6E-16 81.2 4.8 49 44-94 36-85 (100)
145 1v5q_A GRIP1 homolog, glutamat 99.2 4.4E-11 1.5E-15 82.6 6.4 50 43-92 45-94 (122)
146 2csj_A TJP2 protein; PDZ domai 99.2 2.7E-11 9.3E-16 83.0 5.3 50 43-94 46-95 (117)
147 1tp5_A Presynaptic density pro 99.2 5.5E-11 1.9E-15 81.6 6.7 52 43-94 38-89 (119)
148 2yuy_A RHO GTPase activating p 99.2 9E-12 3.1E-16 86.6 2.7 51 43-94 61-111 (126)
149 1qau_A Neuronal nitric oxide s 99.2 1.2E-10 4E-15 79.0 8.2 50 43-93 26-76 (112)
150 1uit_A Human discs large 5 pro 99.2 4.7E-11 1.6E-15 81.7 6.2 51 43-94 42-92 (117)
151 2gzv_A PRKCA-binding protein; 99.2 9.9E-11 3.4E-15 79.9 7.5 52 43-94 50-101 (114)
152 2h2b_A Tight junction protein 99.2 1.3E-10 4.5E-15 78.2 8.1 50 43-94 39-88 (107)
153 1z87_A Alpha-1-syntrophin; pro 99.1 6E-11 2.1E-15 92.2 6.5 53 44-97 104-157 (263)
154 2eaq_A LIM domain only protein 99.1 5.6E-11 1.9E-15 77.5 5.3 47 43-90 28-74 (90)
155 3bpu_A Membrane-associated gua 99.1 1.6E-10 5.6E-15 75.0 7.4 45 43-90 27-71 (88)
156 3kzd_A TIAM-1, T-lymphoma inva 99.1 7.2E-11 2.5E-15 77.9 5.6 47 43-90 35-81 (94)
157 1uez_A KIAA1526 protein; PDZ d 99.1 1.1E-10 3.9E-15 77.7 6.4 47 43-90 35-81 (101)
158 3k1r_A Harmonin; protein-prote 99.1 8.3E-11 2.8E-15 87.3 6.3 49 44-94 111-159 (192)
159 2z17_A Pleckstrin homology SEC 99.1 6.7E-11 2.3E-15 79.3 5.1 51 43-94 48-98 (104)
160 1r6j_A Syntenin 1; PDZ, membra 99.1 6.4E-11 2.2E-15 76.2 4.6 41 2-43 29-69 (82)
161 2d8i_A T-cell lymphoma invasio 99.1 6E-11 2.1E-15 81.1 4.7 46 44-90 45-90 (114)
162 2pzd_A Serine protease HTRA2; 99.1 4.4E-10 1.5E-14 76.3 8.9 65 26-94 9-82 (113)
163 1um7_A Synapse-associated prot 99.1 5.9E-11 2E-15 80.6 4.4 52 43-94 39-90 (113)
164 3soe_A Membrane-associated gua 99.1 3.3E-10 1.1E-14 77.1 7.6 46 44-92 35-80 (113)
165 1ujv_A Membrane associated gua 99.1 5.7E-10 1.9E-14 73.8 8.4 46 44-92 33-78 (96)
166 1uf1_A KIAA1526 protein; PDZ d 99.1 2.4E-10 8.4E-15 79.4 6.8 48 43-91 46-93 (128)
167 2kjp_A Uncharacterized protein 99.1 3.5E-11 1.2E-15 79.0 2.3 44 44-91 2-45 (91)
168 1vae_A Rhophilin 2, rhophilin, 99.1 1.3E-10 4.4E-15 79.1 5.0 50 44-94 37-86 (111)
169 2yub_A LIMK-2, LIM domain kina 99.1 2.2E-10 7.7E-15 78.7 6.2 51 43-94 44-96 (118)
170 2kjd_A Sodium/hydrogen exchang 99.1 2.8E-10 9.4E-15 79.0 6.6 51 43-94 33-83 (128)
171 2p3w_A Probable serine proteas 99.1 4.4E-10 1.5E-14 76.2 7.2 65 26-94 9-82 (112)
172 1x5n_A Harmonin; PDZ domain, u 99.0 4.8E-10 1.7E-14 76.2 7.2 50 43-94 41-90 (114)
173 3qik_A Phosphatidylinositol 3, 99.0 4.8E-10 1.6E-14 74.6 6.7 47 44-91 40-86 (101)
174 3i18_A LMO2051 protein; alpha- 99.0 1.3E-09 4.6E-14 72.5 8.8 45 43-91 7-51 (100)
175 3gge_A PDZ domain-containing p 99.0 3E-10 1E-14 74.8 5.4 42 2-43 34-75 (95)
176 1b8q_A Protein (neuronal nitri 99.0 1.9E-10 6.7E-15 79.7 4.7 50 43-93 33-83 (127)
177 2lob_A Golgi-associated PDZ an 98.6 2.6E-11 8.9E-16 82.6 0.0 50 44-94 54-104 (112)
178 1wh1_A KIAA1095 protein; PDZ d 99.0 6.4E-10 2.2E-14 76.9 6.9 48 43-92 48-95 (124)
179 4fln_A Protease DO-like 2, chl 99.0 2.8E-09 9.4E-14 90.4 11.7 48 44-94 416-463 (539)
180 4a8c_A Periplasmic PH-dependen 99.0 3.2E-09 1.1E-13 88.1 11.3 95 43-174 263-372 (436)
181 3shw_A Tight junction protein 99.0 7.4E-10 2.5E-14 92.4 6.5 51 43-94 23-75 (468)
182 3tsz_A Tight junction protein 98.9 1E-09 3.5E-14 89.9 6.5 51 43-94 31-83 (391)
183 3e17_A Tight junction protein 98.9 1.1E-09 3.6E-14 71.3 5.3 41 2-42 27-67 (88)
184 3cbz_A Dishevelled-2; PDZ doma 98.9 1.3E-09 4.5E-14 73.5 5.3 41 2-42 39-79 (108)
185 2kl1_A YLBL protein; structure 98.9 3.8E-09 1.3E-13 69.5 6.3 45 43-91 5-49 (94)
186 3pv2_A DEGQ; trypsin fold, PDZ 98.9 3.3E-09 1.1E-13 88.4 7.3 45 43-90 282-326 (451)
187 1wi4_A Synip, syntaxin binding 98.9 1.5E-09 5.1E-14 73.4 4.2 42 2-43 47-88 (109)
188 2l97_A HTRA, putative serine p 98.9 1E-08 3.6E-13 71.8 8.5 45 43-91 57-101 (134)
189 1ufx_A KIAA1526 protein; PDZ d 98.9 1.1E-09 3.8E-14 73.3 3.3 42 2-43 38-79 (103)
190 3id1_A Regulator of sigma E pr 98.8 1.7E-08 5.7E-13 66.5 8.6 44 46-92 5-48 (95)
191 3o46_A Maguk P55 subfamily mem 98.8 3.6E-09 1.2E-13 69.3 5.3 42 2-43 34-75 (93)
192 2i04_A Membrane-associated gua 98.8 4E-09 1.4E-13 67.8 5.3 42 2-43 31-72 (85)
193 2kv8_A RGS12, regulator of G-p 98.8 4.9E-09 1.7E-13 67.1 5.6 41 2-43 29-69 (83)
194 2zpm_A Regulator of sigma E pr 98.8 6E-09 2E-13 67.8 6.1 45 45-92 6-50 (91)
195 3b76_A E3 ubiquitin-protein li 98.8 2.6E-09 8.8E-14 73.3 4.4 42 2-43 59-100 (118)
196 2d92_A INAD-like protein; PDZ 98.8 3.6E-09 1.2E-13 71.3 4.9 42 2-43 50-91 (108)
197 2q9v_A Membrane-associated gua 98.8 4.7E-09 1.6E-13 68.2 5.3 41 2-42 33-73 (90)
198 1uep_A Membrane associated gua 98.8 5.3E-09 1.8E-13 69.8 5.6 41 2-42 40-80 (103)
199 1kwa_A Hcask/LIN-2 protein; PD 98.8 3.3E-09 1.1E-13 68.9 4.4 42 2-43 31-72 (88)
200 1wg6_A Hypothetical protein (r 98.8 2.5E-09 8.5E-14 74.3 3.9 41 2-42 61-101 (127)
201 2ejy_A 55 kDa erythrocyte memb 98.8 3.1E-09 1.1E-13 70.4 4.1 41 2-42 42-82 (97)
202 3r68_A Na(+)/H(+) exchange reg 98.8 4.6E-09 1.6E-13 68.9 4.9 41 2-43 35-75 (95)
203 3nfk_A Tyrosine-protein phosph 98.8 5.7E-09 1.9E-13 70.0 5.4 42 2-43 49-91 (107)
204 1v6b_A Harmonin isoform A1; st 98.8 4E-09 1.4E-13 72.3 4.7 41 2-42 49-89 (118)
205 4amh_A Disks large homolog 1; 98.8 5.7E-09 2E-13 70.1 5.3 42 2-43 38-79 (106)
206 1wfg_A Regulating synaptic mem 98.8 5.7E-09 1.9E-13 72.8 5.4 41 2-42 71-111 (131)
207 1ujd_A KIAA0559 protein; PDZ d 98.8 5.4E-09 1.9E-13 71.4 5.1 42 2-43 55-96 (117)
208 2krg_A Na(+)/H(+) exchange reg 98.8 1.7E-09 5.7E-14 81.8 2.7 50 44-94 34-83 (216)
209 2i6v_A General secretion pathw 98.8 9.9E-09 3.4E-13 66.4 5.9 45 44-91 20-64 (87)
210 2iwo_A Multiple PDZ domain pro 98.8 6E-09 2.1E-13 71.6 5.0 41 2-42 59-99 (120)
211 2f5y_A Regulator of G-protein 98.8 7.4E-09 2.5E-13 67.5 5.1 41 2-43 30-70 (91)
212 1g9o_A NHE-RF; PDZ domain, com 98.8 8E-09 2.7E-13 67.2 5.3 41 2-43 33-73 (91)
213 1d5g_A Human phosphatase HPTP1 98.8 8.5E-09 2.9E-13 67.8 5.4 42 2-43 39-80 (96)
214 2uzc_A Human pdlim5, PDZ and L 98.8 8.4E-09 2.9E-13 66.7 5.3 40 2-42 33-72 (88)
215 2byg_A Channel associated prot 98.8 7.9E-09 2.7E-13 70.7 5.3 42 2-43 60-101 (117)
216 1i16_A Interleukin 16, LCF; cy 98.8 2.4E-09 8.1E-14 74.6 2.7 42 2-43 63-104 (130)
217 2la8_A Inactivation-NO-after-p 98.8 6.5E-09 2.2E-13 69.9 4.8 42 2-43 31-72 (106)
218 2he4_A Na(+)/H(+) exchange reg 98.8 8.4E-09 2.9E-13 67.0 5.1 41 2-43 34-74 (90)
219 1y7n_A Amyloid beta A4 precurs 98.8 8.3E-09 2.8E-13 67.4 5.0 40 2-42 37-76 (90)
220 2vsp_A PDZ domain-containing p 98.8 1E-08 3.5E-13 66.8 5.5 41 2-43 33-73 (91)
221 2vwr_A Ligand of NUMB protein 98.8 9.5E-09 3.3E-13 67.4 5.3 41 2-42 35-75 (95)
222 2qg1_A Multiple PDZ domain pro 98.8 9.5E-09 3.3E-13 67.0 5.3 41 2-42 35-75 (92)
223 2pa1_A PDZ and LIM domain prot 98.8 9.9E-09 3.4E-13 66.3 5.3 41 2-43 32-72 (87)
224 1n7e_A AMPA receptor interacti 98.8 9.6E-09 3.3E-13 67.7 5.3 41 2-42 36-76 (97)
225 1rgw_A ZAsp protein; PDZ, cyph 98.8 8.2E-09 2.8E-13 66.3 4.8 40 2-42 31-70 (85)
226 3hpk_A Protein interacting wit 98.8 9.1E-09 3.1E-13 71.0 5.3 42 2-43 51-92 (125)
227 2qkv_A Inactivation-NO-after-p 98.8 1.2E-08 4.1E-13 67.2 5.7 42 2-43 37-78 (96)
228 2djt_A Unnamed protein product 98.8 2.5E-08 8.5E-13 66.5 7.3 41 2-42 44-84 (104)
229 2jil_A GRIP1 protein, glutamat 98.8 1E-08 3.5E-13 67.5 5.3 41 2-42 38-78 (97)
230 3kzd_A TIAM-1, T-lymphoma inva 98.8 7.3E-09 2.5E-13 68.2 4.5 42 2-44 41-82 (94)
231 2q3g_A PDZ and LIM domain prot 98.8 7.5E-09 2.6E-13 67.1 4.5 40 2-42 33-72 (89)
232 2pkt_A PDZ and LIM domain prot 98.8 1.1E-08 3.8E-13 66.6 5.3 41 2-43 33-73 (91)
233 2opg_A Multiple PDZ domain pro 98.8 1.1E-08 3.8E-13 67.5 5.3 42 2-43 36-77 (98)
234 2ego_A General receptor for ph 98.8 1.1E-08 3.7E-13 67.4 5.3 40 2-42 43-82 (96)
235 2fne_A Multiple PDZ domain pro 98.8 1E-08 3.6E-13 70.1 5.3 41 2-42 59-99 (117)
236 4e34_A Golgi-associated PDZ an 98.8 9.3E-09 3.2E-13 66.3 4.8 40 2-42 34-74 (87)
237 1whd_A RGS3, regulator of G-pr 98.8 1.2E-08 4.2E-13 67.7 5.5 40 2-42 42-81 (100)
238 2fe5_A Presynaptic protein SAP 98.8 1E-08 3.5E-13 67.0 5.1 42 2-43 39-80 (94)
239 1wfv_A Membrane associated gua 98.7 1.4E-08 4.7E-13 67.6 5.6 41 2-42 42-82 (103)
240 2jik_A Synaptojanin-2 binding 98.7 1.2E-08 4E-13 67.8 5.3 41 2-42 43-83 (101)
241 2vsv_A Rhophilin-2; scaffold p 98.7 1.2E-08 4E-13 69.1 5.3 40 2-42 50-89 (109)
242 1v62_A KIAA1719 protein; struc 98.7 9.3E-09 3.2E-13 70.3 4.9 42 2-43 48-89 (117)
243 1vb7_A PDZ and LIM domain 2; P 98.7 1.5E-08 5.3E-13 66.4 5.5 41 2-43 36-76 (94)
244 2i1n_A Discs, large homolog 3; 98.7 1.3E-08 4.6E-13 67.6 5.3 42 2-43 40-81 (102)
245 2kpk_A Membrane-associated gua 98.7 1.2E-08 4E-13 71.0 5.2 42 2-43 49-90 (129)
246 2dc2_A GOPC, golgi associated 98.7 1E-08 3.5E-13 68.4 4.7 42 2-43 41-82 (103)
247 2eeg_A PDZ and LIM domain prot 98.7 1.7E-08 6E-13 66.1 5.7 40 2-42 38-77 (94)
248 3ngh_A PDZ domain-containing p 98.7 1.5E-08 5.3E-13 67.7 5.5 40 2-42 32-71 (106)
249 2koj_A Partitioning defective 98.7 1.3E-08 4.3E-13 68.8 5.1 41 2-42 45-85 (111)
250 2dm8_A INAD-like protein; PDZ 98.7 1.6E-08 5.3E-13 68.8 5.6 42 2-43 49-90 (116)
251 3axa_A Afadin, nectin-3, prote 98.7 1.4E-08 4.9E-13 68.0 5.3 42 2-43 44-85 (106)
252 2g5m_B Neurabin-2; spinophilin 98.7 1.1E-08 3.8E-13 69.3 4.8 41 2-42 41-81 (113)
253 2awx_A Synapse associated prot 98.7 1.3E-08 4.6E-13 68.0 5.1 42 2-43 39-80 (105)
254 1ihj_A INAD; intermolecular di 98.7 1.5E-08 5.2E-13 66.8 5.3 41 2-42 43-83 (98)
255 1wf8_A Neurabin-I; PDZ domain, 98.7 1E-08 3.4E-13 68.9 4.4 41 2-42 46-86 (107)
256 1m5z_A GRIP, AMPA receptor int 98.7 1.5E-08 5.2E-13 65.9 5.1 40 2-42 38-77 (91)
257 1wi2_A Riken cDNA 2700099C19; 98.7 1.5E-08 5.2E-13 67.7 5.2 41 2-43 47-87 (104)
258 2fcf_A Multiple PDZ domain pro 98.7 1.6E-08 5.4E-13 67.3 5.3 42 2-43 45-86 (103)
259 1q3o_A Shank1; PDZ, GKAP, pept 98.7 1.6E-08 5.5E-13 68.1 5.3 40 2-42 51-90 (109)
260 1wif_A RSGI RUH-020, riken cDN 98.7 1.2E-08 4.3E-13 70.7 4.8 42 2-43 55-96 (126)
261 3l4f_D SH3 and multiple ankyri 98.7 1.4E-08 4.9E-13 70.9 5.2 40 2-42 71-110 (132)
262 3stj_A Protease DEGQ; serine p 98.7 2.9E-08 1E-12 79.9 7.6 46 43-91 263-308 (345)
263 1wha_A KIAA0147 protein, scrib 98.7 1.4E-08 4.9E-13 67.9 4.9 42 2-43 44-85 (105)
264 2o2t_A Multiple PDZ domain pro 98.7 2.1E-08 7.1E-13 68.3 5.7 41 2-42 55-96 (117)
265 2jxo_A Ezrin-radixin-moesin-bi 98.7 1.7E-08 5.9E-13 66.6 5.1 41 2-43 39-79 (98)
266 2jre_A C60-1 PDZ domain peptid 98.7 1.3E-08 4.4E-13 68.4 4.6 41 2-42 50-90 (108)
267 2db5_A INAD-like protein; PDZ 98.7 1.3E-08 4.5E-13 70.5 4.8 41 2-42 60-101 (128)
268 2yt7_A Amyloid beta A4 precurs 98.7 1.7E-08 6E-13 67.1 5.2 41 2-42 43-83 (101)
269 1ueq_A Membrane associated gua 98.7 1.8E-08 6.1E-13 69.4 5.4 42 2-43 50-91 (123)
270 1fc6_A Photosystem II D1 prote 98.7 4.7E-08 1.6E-12 79.9 8.8 51 43-94 99-149 (388)
271 2dls_A PDZ-rhogef, RHO guanine 98.7 4.3E-08 1.5E-12 64.1 7.0 42 2-44 35-76 (93)
272 2dkr_A LIN-7 homolog B; LIN-7B 98.7 1.6E-08 5.4E-13 66.0 4.8 41 2-42 36-76 (93)
273 2v90_A PDZ domain-containing p 98.7 1.6E-08 5.6E-13 66.4 4.8 41 2-43 36-76 (96)
274 2dlu_A INAD-like protein; PDZ 98.7 1.5E-08 5E-13 68.5 4.6 41 2-42 44-84 (111)
275 3khf_A Microtubule-associated 98.7 2E-08 6.8E-13 66.4 5.1 40 2-42 40-79 (99)
276 2e7k_A Maguk P55 subfamily mem 98.7 2E-08 6.9E-13 65.5 5.1 41 2-43 35-75 (91)
277 1qav_A Alpha-1 syntrophin (res 98.7 1.8E-08 6E-13 65.5 4.8 42 2-43 36-77 (90)
278 2ehr_A INAD-like protein; PDZ 98.7 1.7E-08 5.7E-13 68.8 4.9 42 2-43 56-97 (117)
279 3i4w_A Disks large homolog 4; 98.7 1.7E-08 5.8E-13 67.2 4.8 42 2-43 41-82 (104)
280 2eno_A Synaptojanin-2-binding 98.7 2.1E-08 7.2E-13 68.7 5.4 41 2-42 53-93 (120)
281 2iwq_A Multiple PDZ domain pro 98.7 2E-08 7E-13 69.2 5.3 41 2-42 65-105 (123)
282 1x6d_A Interleukin-16; PDZ dom 98.7 9E-09 3.1E-13 70.4 3.4 41 2-42 48-88 (119)
283 3qe1_A Sorting nexin-27, G pro 98.7 2.1E-08 7.2E-13 67.2 5.1 41 2-43 49-89 (107)
284 1wf7_A Enigma homologue protei 98.7 2.3E-08 7.9E-13 66.6 5.2 40 2-42 35-74 (103)
285 1uhp_A Hypothetical protein KI 98.7 5E-08 1.7E-12 65.4 6.9 41 2-42 47-87 (107)
286 2r4h_A Membrane-associated gua 98.7 2.6E-08 8.8E-13 67.5 5.4 41 2-42 55-95 (112)
287 3sfj_A TAX1-binding protein 3; 98.7 2.3E-08 7.9E-13 66.6 5.1 40 2-42 51-90 (104)
288 1nf3_C PAR-6B; semi-CRIB motif 98.7 2.5E-08 8.6E-13 69.2 5.3 41 2-42 71-111 (128)
289 1te0_A Protease DEGS; two doma 98.7 1E-07 3.5E-12 75.8 9.5 44 44-90 245-288 (318)
290 2kom_A Partitioning defective 98.7 2.5E-08 8.4E-13 68.6 5.1 41 2-42 64-104 (121)
291 2eei_A PDZ domain-containing p 98.7 2.5E-08 8.5E-13 66.7 5.0 40 2-42 38-77 (106)
292 1um1_A KIAA1849 protein, RSGI 98.7 2.5E-08 8.5E-13 67.2 4.9 42 2-43 42-83 (110)
293 1v5l_A PDZ and LIM domain 3; a 98.7 3.3E-08 1.1E-12 65.9 5.4 41 2-43 35-75 (103)
294 2daz_A INAD-like protein; PDZ 98.7 1.9E-08 6.5E-13 69.4 4.3 41 2-42 57-97 (124)
295 2hga_A Conserved protein MTH13 98.7 2.1E-07 7.2E-12 64.3 9.5 44 43-90 25-68 (125)
296 2cs5_A Tyrosine-protein phosph 98.6 2.5E-08 8.5E-13 68.2 4.7 42 2-43 47-89 (119)
297 2d90_A PDZ domain containing p 98.6 3.3E-08 1.1E-12 65.7 5.1 40 2-42 36-75 (102)
298 2iwn_A Multiple PDZ domain pro 98.6 3.6E-08 1.2E-12 64.6 5.2 41 2-42 39-79 (97)
299 2edz_A PDZ domain-containing p 98.6 3.3E-08 1.1E-12 67.1 5.2 40 2-42 44-83 (114)
300 2rcz_A Tight junction protein 98.6 4.2E-08 1.4E-12 62.1 5.2 41 2-42 27-67 (81)
301 3qik_A Phosphatidylinositol 3, 98.6 3.1E-08 1.1E-12 65.8 4.6 40 2-42 45-84 (101)
302 1q7x_A PDZ2B domain of PTP-BAS 98.6 1.9E-08 6.6E-13 67.6 3.7 41 2-42 48-88 (108)
303 3cyy_A Tight junction protein 98.6 4.6E-08 1.6E-12 63.6 5.5 42 2-43 29-70 (92)
304 3tsv_A Tight junction protein 98.6 3E-08 1E-12 68.5 4.7 40 2-42 57-96 (124)
305 1va8_A Maguk P55 subfamily mem 98.6 3.8E-08 1.3E-12 66.8 5.1 41 2-42 54-94 (113)
306 2eeh_A PDZ domain-containing p 98.6 3.8E-08 1.3E-12 65.2 5.0 42 2-44 42-83 (100)
307 2i4s_A General secretion pathw 98.6 8.3E-08 2.8E-12 64.2 6.7 44 44-90 38-81 (105)
308 2dmz_A INAD-like protein; PDZ 98.6 2.8E-08 9.7E-13 68.9 4.4 42 2-43 52-93 (129)
309 1lcy_A HTRA2 serine protease; 98.6 1.3E-07 4.3E-12 75.5 8.6 65 26-94 230-303 (325)
310 1uju_A Scribble; PDZ domain, c 98.6 1.2E-08 4.2E-13 68.9 2.2 42 2-43 50-91 (111)
311 1n7t_A 99-MER peptide of densi 98.6 6.1E-08 2.1E-12 64.5 5.4 39 2-42 49-87 (103)
312 2gzv_A PRKCA-binding protein; 98.6 5.6E-08 1.9E-12 66.1 5.3 41 2-42 56-96 (114)
313 2z17_A Pleckstrin homology SEC 98.6 2.5E-08 8.6E-13 66.6 3.5 40 2-42 54-93 (104)
314 1uez_A KIAA1526 protein; PDZ d 98.6 3.4E-08 1.2E-12 65.5 4.1 41 2-43 41-81 (101)
315 2eaq_A LIM domain only protein 98.6 6.4E-08 2.2E-12 62.7 5.3 40 2-42 34-73 (90)
316 2w4f_A Protein LAP4; structura 98.6 5.8E-08 2E-12 63.8 5.1 40 2-42 40-79 (97)
317 1um7_A Synapse-associated prot 98.6 6.5E-08 2.2E-12 65.3 5.5 41 2-42 45-85 (113)
318 2yuy_A RHO GTPase activating p 98.6 2.7E-08 9.3E-13 68.8 3.7 41 2-43 67-107 (126)
319 1vae_A Rhophilin 2, rhophilin, 98.6 4.6E-08 1.6E-12 66.3 4.7 40 2-42 42-81 (111)
320 2d8i_A T-cell lymphoma invasio 98.6 2.5E-08 8.7E-13 67.9 3.4 42 2-44 50-91 (114)
321 1mfg_A ERB-B2 interacting prot 98.6 5.7E-08 1.9E-12 63.7 5.0 39 2-42 41-79 (95)
322 1v5q_A GRIP1 homolog, glutamat 98.6 4.9E-08 1.7E-12 67.1 4.8 41 2-42 51-91 (122)
323 1tp5_A Presynaptic density pro 98.6 5.4E-08 1.8E-12 66.5 4.8 41 2-42 44-84 (119)
324 1uew_A Membrane associated gua 98.6 4.8E-08 1.6E-12 66.3 4.5 40 2-42 49-89 (114)
325 2vz5_A TAX1-binding protein 3; 98.6 6.1E-08 2.1E-12 68.2 5.0 41 2-43 70-110 (139)
326 1uf1_A KIAA1526 protein; PDZ d 98.6 7.2E-08 2.5E-12 66.7 5.1 42 2-44 52-93 (128)
327 2edp_A Fragment, shroom family 98.6 7.2E-08 2.5E-12 63.9 4.7 41 2-43 41-81 (100)
328 1y8t_A Hypothetical protein RV 98.5 2.9E-07 9.9E-12 73.3 8.9 44 44-90 243-286 (324)
329 1x5q_A LAP4 protein; PDZ domai 98.5 9.6E-08 3.3E-12 64.3 5.1 40 2-42 52-91 (110)
330 1ky9_A Protease DO, DEGP, HTRA 98.5 2.6E-08 8.8E-13 82.9 2.4 45 43-90 286-330 (448)
331 2edv_A FERM and PDZ domain-con 98.5 2.6E-07 8.9E-12 60.7 6.8 39 2-42 37-75 (96)
332 3bpu_A Membrane-associated gua 98.5 9.5E-08 3.2E-12 61.7 4.4 37 4-42 34-70 (88)
333 1uit_A Human discs large 5 pro 98.5 1E-07 3.6E-12 64.8 4.4 40 2-42 48-87 (117)
334 1x5n_A Harmonin; PDZ domain, u 98.5 1E-07 3.5E-12 64.5 4.2 40 2-42 47-86 (114)
335 3k1r_A Harmonin; protein-prote 98.5 1.2E-07 4.1E-12 70.1 4.8 42 2-44 116-157 (192)
336 2kjd_A Sodium/hydrogen exchang 98.5 1.7E-07 5.9E-12 64.7 5.1 41 2-43 39-79 (128)
337 1z87_A Alpha-1-syntrophin; pro 98.5 1.5E-07 5E-12 73.1 5.1 42 2-43 109-150 (263)
338 1qau_A Neuronal nitric oxide s 98.5 2E-07 7E-12 62.8 5.1 40 2-42 32-72 (112)
339 3shw_A Tight junction protein 98.5 3.2E-07 1.1E-11 76.6 7.2 71 2-73 29-128 (468)
340 3tsz_A Tight junction protein 98.5 3.3E-07 1.1E-11 75.0 7.2 71 2-73 37-136 (391)
341 3qo6_A Protease DO-like 1, chl 98.4 1.7E-07 5.9E-12 75.5 5.2 73 43-152 251-336 (348)
342 2h2b_A Tight junction protein 98.4 2.7E-07 9.1E-12 61.7 4.9 39 2-42 45-83 (107)
343 2lob_A Golgi-associated PDZ an 97.8 3E-08 1E-12 67.3 0.0 40 2-42 59-99 (112)
344 4fgm_A Aminopeptidase N family 98.4 2.6E-07 8.9E-12 79.4 5.7 43 44-90 497-539 (597)
345 2csj_A TJP2 protein; PDZ domai 98.4 1.6E-07 5.5E-12 64.0 3.4 39 2-42 52-90 (117)
346 2yub_A LIMK-2, LIM domain kina 98.4 1.7E-07 5.8E-12 64.2 3.3 41 2-43 50-92 (118)
347 2qbw_A PDZ-fibronectin fusion 98.4 3.4E-07 1.2E-11 67.5 5.2 40 2-43 30-69 (195)
348 3soe_A Membrane-associated gua 98.3 6.1E-07 2.1E-11 60.9 5.2 35 8-43 44-78 (113)
349 1b8q_A Protein (neuronal nitri 98.3 2.9E-07 1E-11 63.5 3.5 41 2-43 39-80 (127)
350 1wh1_A KIAA1095 protein; PDZ d 98.3 7.5E-07 2.6E-11 61.2 4.7 40 2-43 54-93 (124)
351 3num_A Serine protease HTRA1; 98.3 9.2E-08 3.1E-12 76.5 0.0 48 43-94 254-301 (332)
352 1ujv_A Membrane associated gua 98.3 1E-06 3.5E-11 57.9 5.1 38 3-43 39-76 (96)
353 3k50_A Putative S41 protease; 98.3 3.4E-07 1.2E-11 75.1 3.1 42 45-90 92-133 (403)
354 3id1_A Regulator of sigma E pr 98.2 5.7E-07 1.9E-11 59.1 3.0 31 2-33 8-38 (95)
355 2kjp_A Uncharacterized protein 98.2 8E-07 2.7E-11 57.9 3.6 37 2-42 7-43 (91)
356 2zpm_A Regulator of sigma E pr 98.2 1.3E-06 4.3E-11 56.6 4.4 37 2-41 10-46 (91)
357 4fln_A Protease DO-like 2, chl 98.2 7.7E-06 2.6E-10 69.4 10.3 35 43-79 277-311 (539)
358 2krg_A Na(+)/H(+) exchange reg 98.1 1.1E-06 3.9E-11 66.2 3.0 40 2-42 39-78 (216)
359 2kl1_A YLBL protein; structure 98.1 2.3E-06 7.7E-11 56.0 3.9 36 2-41 11-46 (94)
360 2pzd_A Serine protease HTRA2; 98.1 5E-06 1.7E-10 56.0 4.8 38 2-42 41-78 (113)
361 2i6v_A General secretion pathw 98.0 1.5E-06 5E-11 56.0 1.5 30 4-34 27-56 (87)
362 3i18_A LMO2051 protein; alpha- 98.0 3E-06 1E-10 56.0 2.9 37 2-42 13-49 (100)
363 2l97_A HTRA, putative serine p 97.9 5.5E-06 1.9E-10 57.7 3.3 30 2-33 63-92 (134)
364 2p3w_A Probable serine proteas 97.9 4.7E-06 1.6E-10 56.0 2.9 37 2-41 41-77 (112)
365 2i4s_A General secretion pathw 97.9 6.5E-06 2.2E-10 54.8 3.3 37 5-42 46-83 (105)
366 1fc6_A Photosystem II D1 prote 97.8 1.7E-05 5.7E-10 64.7 5.2 40 2-42 105-144 (388)
367 1k32_A Tricorn protease; prote 97.8 7.7E-05 2.6E-09 67.4 8.9 49 43-94 748-805 (1045)
368 3k50_A Putative S41 protease; 97.6 3.9E-05 1.3E-09 62.9 3.4 31 2-33 96-126 (403)
369 2hga_A Conserved protein MTH13 97.6 4.3E-05 1.5E-09 52.6 3.1 36 2-41 31-66 (125)
370 1te0_A Protease DEGS; two doma 97.5 5.5E-05 1.9E-09 60.0 3.7 38 2-42 250-287 (318)
371 1y8t_A Hypothetical protein RV 97.5 5.8E-05 2E-09 59.9 3.0 37 2-41 248-284 (324)
372 1lcy_A HTRA2 serine protease; 97.5 8.9E-05 3E-09 59.0 4.1 39 2-43 262-300 (325)
373 3stj_A Protease DEGQ; serine p 97.5 4.4E-05 1.5E-09 61.3 2.3 37 2-41 269-305 (345)
374 3num_A Serine protease HTRA1; 97.2 5.7E-05 1.9E-09 60.2 0.0 31 2-33 260-290 (332)
375 3qo6_A Protease DO-like 1, chl 97.1 0.00018 6.1E-09 57.7 2.6 37 2-41 257-304 (348)
376 4fgm_A Aminopeptidase N family 97.1 0.00046 1.6E-08 59.3 4.7 28 2-30 502-529 (597)
377 1k32_A Tricorn protease; prote 95.5 0.0097 3.3E-07 53.7 3.9 35 6-43 766-801 (1045)
378 3egg_C Spinophilin; PP1, serin 94.1 0.069 2.4E-06 38.3 4.7 35 139-174 79-120 (170)
379 3dor_A Protein CT_858, CPAF; m 58.0 11 0.00036 32.2 4.2 15 62-76 110-124 (583)
380 3ddy_A Lumazine protein, LUMP; 36.9 19 0.00064 26.0 2.2 47 12-68 34-81 (186)
381 2j3t_D Trafficking protein par 35.1 28 0.00096 25.7 3.0 23 56-79 52-74 (219)
382 3dor_A Protein CT_858, CPAF; m 33.8 19 0.00066 30.7 2.1 17 15-31 110-126 (583)
383 3bbo_O Ribosomal protein L16; 30.2 51 0.0017 22.3 3.4 37 53-94 88-124 (135)
384 1pqh_A Aspartate 1-decarboxyla 29.9 58 0.002 22.3 3.6 53 10-75 51-109 (143)
385 1uhe_A Aspartate 1-decarboxyla 29.0 26 0.0009 22.4 1.6 29 5-38 45-73 (97)
386 2j3t_D Trafficking protein par 28.9 35 0.0012 25.2 2.6 44 9-53 52-102 (219)
387 3plx_B Aspartate 1-decarboxyla 28.7 27 0.00091 22.6 1.6 29 6-39 47-75 (102)
388 1vc3_B L-aspartate-alpha-decar 28.7 26 0.00089 22.4 1.6 18 6-25 48-65 (96)
389 2ftc_I Mitochondrial ribosomal 24.4 38 0.0013 22.4 1.9 37 54-94 76-112 (118)
390 3oug_A Aspartate 1-decarboxyla 23.4 37 0.0013 22.3 1.6 17 6-24 75-91 (114)
391 3pjy_A Hypothetical signal pep 22.0 23 0.0008 24.0 0.5 23 45-69 103-125 (136)
392 1o65_A Hypothetical protein YI 21.0 1.3E+02 0.0044 22.5 4.4 69 15-92 116-194 (246)
393 2kl0_A Putative thiamin biosyn 20.7 1.3E+02 0.0045 17.7 3.7 49 22-71 3-59 (73)
No 1
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.89 E-value=7.8e-22 Score=172.93 Aligned_cols=172 Identities=30% Similarity=0.484 Sum_probs=118.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC--------------------------------------
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG-------------------------------------- 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-------------------------------------- 43 (175)
+|.|||||+++|+|+.||+|++|||+++.+++|.+++.+++.
T Consensus 95 ~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~~~~~~~v~l~k~~~~lG~~i~~~ 174 (721)
T 2xkx_A 95 KIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGG 174 (721)
T ss_pred EeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhccccccceEEEecccccccceeeeeeeecCCCceeeccC
Confidence 578999999999999999999999999999999988877741
Q ss_pred ----------CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCCCCCCCCCC---------CC
Q psy1521 44 ----------GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAKAKPCPTVP---------SE 104 (175)
Q Consensus 44 ----------gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~~~~~~~~~---------~~ 104 (175)
|++|..|.++|+|+++|+|++||+|++|||+++.+++|.+++.++++.+..+++..... ..
T Consensus 175 ~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g~~~~~~~~~~ 254 (721)
T 2xkx_A 175 VGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNAYLSDSYAP 254 (721)
T ss_pred CCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCCcccccCCCCC
Confidence 46899999999999999999999999999999999999999999998776543211100 00
Q ss_pred CCCCCCCCC--c---cc-ce--eeeeeeeeec---ccCC-----C-CCCCCCceEEEEEEeCCCCCcCEEEEcCcCCCce
Q psy1521 105 PNANATTGE--K---TT-FY--FHFQVKLVVL---RDTV-----T-KEDDLLEFVDVELTKKAGKGFGLSLVGRKQGPGV 167 (175)
Q Consensus 105 ~~~~~~~~~--~---~~-~~--~~~~v~l~v~---r~~~-----~-~~~~~~~~~~v~l~k~~~~~lGfsi~gg~~~~gi 167 (175)
|....+... . ++ .+ ..+...+... +..+ . ........+.|+|.+. ..+|||++.++....|+
T Consensus 255 p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~~~-~~~lG~~i~~~~~~~gv 333 (721)
T 2xkx_A 255 PDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRG-STGLGFNIVGGEDGEGI 333 (721)
T ss_pred CCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEEEEEC-CCCccEEEeccCCCCCe
Confidence 110000000 0 00 00 0000000000 0000 0 0011224688888864 47899999988777899
Q ss_pred EEEeccC
Q psy1521 168 FISDLVS 174 (175)
Q Consensus 168 ~I~~i~~ 174 (175)
||..|.|
T Consensus 334 ~V~~V~~ 340 (721)
T 2xkx_A 334 FISFILA 340 (721)
T ss_pred EEEEeCC
Confidence 9999976
No 2
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.88 E-value=4.8e-22 Score=147.97 Aligned_cols=93 Identities=38% Similarity=0.586 Sum_probs=86.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC--------------------------------------
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG-------------------------------------- 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-------------------------------------- 43 (175)
.|.|+|||+++|+|+.||+|++|||+++.++++.++..+++.
T Consensus 41 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~~~~v~l~~~~~~lG~~~~~~ 120 (196)
T 3gsl_A 41 KIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGG 120 (196)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEECCCCEEEEEEEEEEBTTBSCEEEEES
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCCCccccEEEEEecCCCCceEEEEcc
Confidence 578999999999999999999999999999999888877641
Q ss_pred ----------CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 ----------GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 ----------gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
|++|..|.++|+|+++|+|++||+|++|||+++.+++|.+++.+|++.+..
T Consensus 121 ~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 181 (196)
T 3gsl_A 121 VGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDV 181 (196)
T ss_dssp BTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEE
T ss_pred CCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCe
Confidence 579999999999999999999999999999999999999999999987665
No 3
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.87 E-value=9.3e-22 Score=147.95 Aligned_cols=93 Identities=23% Similarity=0.350 Sum_probs=86.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCC--CCHHHHHHHhhC------------------------------------
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRD--KSQEEVATIMKG------------------------------------ 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~--~~~~~~~~~l~~------------------------------------ 43 (175)
.|.|+|+|+++|+|+.||+|++|||+++.+ +++.+++.+++.
T Consensus 51 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~~~~~~v~l~~~~~~~lG~~ 130 (206)
T 3r0h_A 51 HVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRADPPELEKFNVDLMKKAGKELGLS 130 (206)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECCSSCCEEEEEEEEECCTTCCCCEE
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEecccCCCcEEEEEEecCCCCccCeE
Confidence 578999999999999999999999999999 889988877641
Q ss_pred ------CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 ------GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 ------gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
++||..|.++|+|+++|+|++||+|++|||+++.+++|.+++.++++.+..
T Consensus 131 ~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 187 (206)
T 3r0h_A 131 LSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGK 187 (206)
T ss_dssp EEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred EEcCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 589999999999999998999999999999999999999999999987666
No 4
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.78 E-value=1.3e-18 Score=130.07 Aligned_cols=93 Identities=20% Similarity=0.347 Sum_probs=83.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh---------------------------------------
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK--------------------------------------- 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~--------------------------------------- 42 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.++..+++
T Consensus 42 ~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~~~~~~~~~v~l~~~~~~~l 121 (196)
T 1p1d_A 42 YIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVEL 121 (196)
T ss_dssp ECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEECSCSCCBCCSSCEEEEECCCSSCCC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecCCCCCCCCCCcEEEEecCCCCCCc
Confidence 47899999999999999999999999999888887776663
Q ss_pred -------------CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 -------------GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 -------------~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++++++.++|++.+..
T Consensus 122 G~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 186 (196)
T 1p1d_A 122 GITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDL 186 (196)
T ss_dssp CCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTC
T ss_pred CEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCE
Confidence 1468999999999999999999999999999999999999999999988555
No 5
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.78 E-value=1.4e-18 Score=130.13 Aligned_cols=93 Identities=29% Similarity=0.500 Sum_probs=82.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC--------------------------------------
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG-------------------------------------- 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-------------------------------------- 43 (175)
.|.|+|||+++|.|+.||+|++|||.++.+++|.++..+++.
T Consensus 39 ~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~g~~~~~~~~~v~l~~~~~~ 118 (200)
T 2qt5_A 39 NLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYELPPVSIQGSSVMFRTVEVTLHKEGNT 118 (200)
T ss_dssp EECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEECCCCCCCCSSEEEEEEEEEEECBTTB
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEeccCCCcccCCCccceeEEEEEEecCCCC
Confidence 578999999994499999999999999999999888876630
Q ss_pred -----------------CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 -----------------GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 -----------------gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|+|+++|+|++||+|++|||+++.+++++++.++|++.+..
T Consensus 119 lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 186 (200)
T 2qt5_A 119 FGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQE 186 (200)
T ss_dssp CSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSE
T ss_pred eEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 357889999999999999999999999999999999999999999985444
No 6
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.77 E-value=1.1e-19 Score=149.08 Aligned_cols=92 Identities=28% Similarity=0.486 Sum_probs=38.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC------------------------------------Ce
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG------------------------------------GI 45 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~------------------------------------gi 45 (175)
.|.|||||+++|+|+.||+|++|||+++.+|+|.++..+++. +.
T Consensus 238 ~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~~~~~~~~lG~~i~~g 317 (388)
T 3suz_A 238 NMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNG 317 (388)
T ss_dssp CCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSCC--------------------
T ss_pred eeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccccccceeeEeecCCCCccceEEecC
Confidence 688999999999999999999999999999999888877642 23
Q ss_pred EEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 46 LVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 46 ~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+|..|.++|+|+++| |++||+|++|||+++.+.+|++++.+|++.+..
T Consensus 318 ~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~ 365 (388)
T 3suz_A 318 IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSVGE 365 (388)
T ss_dssp -------------------------------------------------
T ss_pred EEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 788999999999999 999999999999999999999999999998777
No 7
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.70 E-value=1e-16 Score=121.03 Aligned_cols=123 Identities=17% Similarity=0.154 Sum_probs=92.4
Q ss_pred ccCCCChhhhcCCCCCC-CEEEEECCeeCCCCCHHH--HHHHhh------------------------------------
Q psy1521 2 RAVPGGIAATDGRLLKG-DQIMSVDGTDVRDKSQEE--VATIMK------------------------------------ 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~G-D~Il~Vng~~v~~~~~~~--~~~~l~------------------------------------ 42 (175)
.|.|+|||+++| |+.| |+|++|||+++.++.+.. ......
T Consensus 22 ~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~~~~~~~~~lGi~ 100 (209)
T 3rle_A 22 RVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGGQGLLGVS 100 (209)
T ss_dssp EECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEEECCCSSSSSSSSSCEE
T ss_pred EECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEEEcccccccccCccceE
Confidence 588999999999 9999 999999999999987532 111110
Q ss_pred -----------CCeEEEEecCCCcccccCCcCC-CCEEEEECCeecCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCC
Q psy1521 43 -----------GGILVHDIYPEGAAAKDARLKF-GDQILELTGEDFRNITHAKAMAHLRLTPAKAKPCPTVPSEPNANAT 110 (175)
Q Consensus 43 -----------~gi~V~~v~~gg~A~~~G~L~~-GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~~~~~~~~~~~~~~~~~ 110 (175)
.|++|..|.++|||+++| |++ ||+|++|||. +. ++++...++++....
T Consensus 101 ~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~--~~~~l~~~l~~~~g~---------------- 160 (209)
T 3rle_A 101 IRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MN--ESEDLFSLIETHEAK---------------- 160 (209)
T ss_dssp EEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CC--SSSCHHHHHHHTTTS----------------
T ss_pred EeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eC--CHHHHHHHHHhCCCC----------------
Confidence 156899999999999999 999 9999999997 64 457777888876333
Q ss_pred CCCcccceeeeeeeeeecccCCCCCCCCCceEEEEEEeC----CCCCcCEEEEcCc
Q psy1521 111 TGEKTTFYFHFQVKLVVLRDTVTKEDDLLEFVDVELTKK----AGKGFGLSLVGRK 162 (175)
Q Consensus 111 ~~~~~~~~~~~~v~l~v~r~~~~~~~~~~~~~~v~l~k~----~~~~lGfsi~gg~ 162 (175)
.+.|.+.|... ...++++|..+ +.+-||+.+..+.
T Consensus 161 -----------~v~l~v~r~~~------~~~~~v~l~p~~~~~g~g~lG~~~~~g~ 199 (209)
T 3rle_A 161 -----------PLKLYVYNTDT------DNCREVIITPNSAWGGEGSLGCGIGYGY 199 (209)
T ss_dssp -----------CEEEEEEETTT------TEEEEEEECCCTTSSSSSSSCEEEECSG
T ss_pred -----------eEEEEEEECCc------eEEEEEEEEecCCCCCceeeeEEecCce
Confidence 28899888632 13467777653 2344788876553
No 8
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.70 E-value=1.9e-16 Score=115.37 Aligned_cols=91 Identities=20% Similarity=0.331 Sum_probs=79.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh-------------C----------------Ce-----EE
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK-------------G----------------GI-----LV 47 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~-------------~----------------gi-----~V 47 (175)
.|.|+|||+++| |+.||+|++|||.++.+++++.+..+++ + |+ +|
T Consensus 33 ~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~~~~~~v~l~~~~~~~lG~~~~~g~v 111 (166)
T 1w9e_A 33 LVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKI 111 (166)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCTTCEEEEEECCTTSCCSEEEETTEE
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcCCCcEEEEEecCCCCcEeEEEeCCEE
Confidence 578999999999 9999999999999999999865555543 0 22 78
Q ss_pred EEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 48 HDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 48 ~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
..+.++|||+++| |++||+|++|||+++.++++.++...+++.+..
T Consensus 112 ~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~ 157 (166)
T 1w9e_A 112 TSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTV 157 (166)
T ss_dssp EEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred EEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhCCCE
Confidence 8999999999999 999999999999999999999998888887765
No 9
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.69 E-value=1.6e-16 Score=139.39 Aligned_cols=93 Identities=34% Similarity=0.573 Sum_probs=82.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh---------------------------------------
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK--------------------------------------- 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~--------------------------------------- 42 (175)
.|.++|+|+++|+|+.||+|++|||+++.+++|.+++.+++
T Consensus 190 ~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g~~~~~~~~~~p~~~~~~s~~~~~~~ 269 (721)
T 2xkx_A 190 KIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEI 269 (721)
T ss_pred EeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCCcccccCCCCCCCcccCCCCCccccc
Confidence 57899999999999999999999999999988655543331
Q ss_pred -------------------------------------------------------------CCeEEEEecCCCcccccCC
Q psy1521 43 -------------------------------------------------------------GGILVHDIYPEGAAAKDAR 61 (175)
Q Consensus 43 -------------------------------------------------------------~gi~V~~v~~gg~A~~~G~ 61 (175)
.|+||..|.++|+|+++|+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~~~~~~lG~~i~~~~~~~gv~V~~V~~gs~A~~aG~ 349 (721)
T 2xkx_A 270 SHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGE 349 (721)
T ss_pred CCcccccccccccCCCCCCcccCCcccccccccccccceEEEEEEECCCCccEEEeccCCCCCeEEEEeCCCChHHhcCC
Confidence 1568999999999999999
Q ss_pred cCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 62 LKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 62 L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
|++||+|++|||+++.+++|++++.+|++.+..
T Consensus 350 L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~ 382 (721)
T 2xkx_A 350 LRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 382 (721)
T ss_pred CccCCEEEEECCEECCCCCHHHHHHHHHhcCCe
Confidence 999999999999999999999999999987766
No 10
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.63 E-value=2.5e-15 Score=124.84 Aligned_cols=89 Identities=22% Similarity=0.336 Sum_probs=74.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHH-HHHHhh--------------------------------------
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEE-VATIMK-------------------------------------- 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~-~~~~l~-------------------------------------- 42 (175)
.|.|+|||+++| |+.||+|++|||+++.++.+-. ++....
T Consensus 269 ~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~g 347 (436)
T 4a8c_A 269 EVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPA 347 (436)
T ss_pred EECCCChHHHCC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEECCCCcccccccccccC
Confidence 578999999999 9999999999999999886422 111110
Q ss_pred ---------------CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 ---------------GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ---------------~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||+++| |++||+|++|||+.+. +++++.+++++.+..
T Consensus 348 l~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~--~~~~~~~~l~~~~~~ 411 (436)
T 4a8c_A 348 LEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVN--SIAEMRKVLAAKPAI 411 (436)
T ss_pred ceeeecccccccCCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCe
Confidence 157899999999999999 9999999999999995 579999999986555
No 11
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.62 E-value=6e-15 Score=110.57 Aligned_cols=99 Identities=38% Similarity=0.546 Sum_probs=84.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCC--CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCcccceee
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRN--ITHAKAMAHLRLTPAKAKPCPTVPSEPNANATTGEKTTFYFH 120 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~--~~~~~a~~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (175)
.|++|..|.++|||+++|+|++||+|++|||+++.+ ++|.+++.+++..+..
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~-------------------------- 98 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEK-------------------------- 98 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSS--------------------------
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCC--------------------------
Confidence 489999999999999998899999999999999999 9999999999987766
Q ss_pred eeeeeeecccCCCCCCCCCceEEEEEEeCCCCCcCEEEEcCcCCCceEEEeccC
Q psy1521 121 FQVKLVVLRDTVTKEDDLLEFVDVELTKKAGKGFGLSLVGRKQGPGVFISDLVS 174 (175)
Q Consensus 121 ~~v~l~v~r~~~~~~~~~~~~~~v~l~k~~~~~lGfsi~gg~~~~gi~I~~i~~ 174 (175)
.+.|++.|+... ....+++.+.+....+|||++..+. .|+||.+|.|
T Consensus 99 -~v~l~v~R~~~~----~~~~~~v~l~~~~~~~lG~~~~~~~--~gv~V~~V~~ 145 (206)
T 3r0h_A 99 -AVTLTVFRADPP----ELEKFNVDLMKKAGKELGLSLSPNE--IGCTIADLIQ 145 (206)
T ss_dssp -EEEEEEECCSSC----CEEEEEEEEECCTTCCCCEEEEECS--SCEEEEEECT
T ss_pred -ceEEEEEecccC----CCcEEEEEEecCCCCccCeEEEcCC--ceEEEEEECC
Confidence 478888887543 2346778887766678999998643 5899999976
No 12
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.62 E-value=6.7e-15 Score=109.12 Aligned_cols=100 Identities=30% Similarity=0.545 Sum_probs=84.6
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCcccceeeee
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAKAKPCPTVPSEPNANATTGEKTTFYFHFQ 122 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (175)
.++||..|.++|||+++|+|++||+|++|||+++.+++|.++..+++..+..
T Consensus 35 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~---------------------------- 86 (196)
T 3gsl_A 35 PSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSI---------------------------- 86 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSE----------------------------
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc----------------------------
Confidence 3899999999999999999999999999999999999999999999988776
Q ss_pred eeeeecccCCCCCCCCCceEEEEEEeCCCCCcCEEEEcCcC------CCceEEEeccCC
Q psy1521 123 VKLVVLRDTVTKEDDLLEFVDVELTKKAGKGFGLSLVGRKQ------GPGVFISDLVSE 175 (175)
Q Consensus 123 v~l~v~r~~~~~~~~~~~~~~v~l~k~~~~~lGfsi~gg~~------~~gi~I~~i~~~ 175 (175)
+.|++.|.... ....+++++.+.. .+|||++.++.. ..|+||..|.|.
T Consensus 87 v~l~v~r~~~~----~~~~~~v~l~~~~-~~lG~~~~~~~~~~~~~~~~gv~V~~V~~g 140 (196)
T 3gsl_A 87 VRLYVMRRKPP----AEKVMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEG 140 (196)
T ss_dssp EEEEEEEECCC----CEEEEEEEEEEBT-TBSCEEEEESBTSCSBTTBCCEEEEEECTT
T ss_pred EEEEEEecCCC----ccccEEEEEecCC-CCceEEEEccCCCcCCCCCCCEEEEEECCC
Confidence 89999886543 1245778887654 589999998753 358999999863
No 13
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.61 E-value=3.7e-15 Score=124.31 Aligned_cols=89 Identities=17% Similarity=0.241 Sum_probs=73.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHH-HHHHHhh--------------------------------------
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQE-EVATIMK-------------------------------------- 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~-~~~~~l~-------------------------------------- 42 (175)
.|.|+|||+++| |+.||+|++|||+++.++.+- .++...+
T Consensus 288 ~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~~~~~~~~~ 366 (451)
T 3pv2_A 288 QVNPNSPAELAG-LKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSNNPF 366 (451)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCHHHHHHHHHHHSTT
T ss_pred ecCCCChHHHcC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEccCCcccccccccccc
Confidence 578999999999 999999999999999987531 1111110
Q ss_pred -------------------CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 -------------------GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 -------------------~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||+++| |++||+|++|||+++. +.++..+++++.+..
T Consensus 367 ~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~--~~~~~~~~l~~~~~~ 434 (451)
T 3pv2_A 367 LYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAG-IRPGDIIISANKKPVT--DVKSLQTIAQEKKKE 434 (451)
T ss_dssp TTTEEEEEEEEECTTSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHTTSSCSC
T ss_pred ccccccccCChhHhcccCCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhcCCCe
Confidence 146899999999999999 9999999999999996 468999999885555
No 14
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.54 E-value=6.4e-14 Score=104.44 Aligned_cols=104 Identities=22% Similarity=0.276 Sum_probs=83.2
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC-CCCCCCCCCCCCCCCCCCCCCcccceeeee
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP-AKAKPCPTVPSEPNANATTGEKTTFYFHFQ 122 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (175)
+++|..|.++|||+++|+|++||+|++|||+.+.+++|.++..+|+... .. .
T Consensus 37 ~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~---------------------------~ 89 (196)
T 1p1d_A 37 PPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITS---------------------------K 89 (196)
T ss_dssp SEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSS---------------------------E
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC---------------------------e
Confidence 7899999999999999999999999999999999989999999999874 22 2
Q ss_pred eeeeecccCCCCCCCCCceEEEEEEeCCCCCcCEEEEcCcC---CCceEEEeccC
Q psy1521 123 VKLVVLRDTVTKEDDLLEFVDVELTKKAGKGFGLSLVGRKQ---GPGVFISDLVS 174 (175)
Q Consensus 123 v~l~v~r~~~~~~~~~~~~~~v~l~k~~~~~lGfsi~gg~~---~~gi~I~~i~~ 174 (175)
+.|++.|+...........+++++.++....|||++..... ..|+||..|.|
T Consensus 90 v~l~v~R~~~~~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~ 144 (196)
T 1p1d_A 90 VTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKK 144 (196)
T ss_dssp EEEEEEECSCSCCBCCSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCS
T ss_pred EEEEEEecCCCCCCCCCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECC
Confidence 88888887643211112457788876566789999987642 46899999876
No 15
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.54 E-value=9.3e-14 Score=103.75 Aligned_cols=102 Identities=25% Similarity=0.326 Sum_probs=81.5
Q ss_pred CCeEEEEecCCCccccc-CCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCcccceeee
Q psy1521 43 GGILVHDIYPEGAAAKD-ARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAKAKPCPTVPSEPNANATTGEKTTFYFHF 121 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~-G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (175)
.+++|..|.++|||+++ | |++||+|++|||+++.+++|.++..++++.+..
T Consensus 33 ~~~~V~~v~~~spA~~agg-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~--------------------------- 84 (200)
T 2qt5_A 33 GKPRVSNLRQGGIAARSDQ-LDVGDYIKAVNGINLAKFRHDEIISLLKNVGER--------------------------- 84 (200)
T ss_dssp SCSEEEEECTTSHHHHTTS-CCTTCEEEEETTEECTTSCHHHHHHHHHTCCSE---------------------------
T ss_pred CCeEEEEECCCChHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe---------------------------
Confidence 36899999999999999 6 999999999999999999999999999988776
Q ss_pred eeeeeecccCCCCCC-CCC---ceEEEEEEeCCCCCcCEEEEcCcC-----CCceEEEeccC
Q psy1521 122 QVKLVVLRDTVTKED-DLL---EFVDVELTKKAGKGFGLSLVGRKQ-----GPGVFISDLVS 174 (175)
Q Consensus 122 ~v~l~v~r~~~~~~~-~~~---~~~~v~l~k~~~~~lGfsi~gg~~-----~~gi~I~~i~~ 174 (175)
+.|++.|+.+.... ... .++++++.+ ...+|||.+.++.. ..|+||..+.|
T Consensus 85 -v~l~v~R~~~~~~~~g~~~~~~~~~v~l~~-~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~ 144 (200)
T 2qt5_A 85 -VVLEVEYELPPVSIQGSSVMFRTVEVTLHK-EGNTFGFVIRGGAHDDRNKSRPVVITCVRP 144 (200)
T ss_dssp -EEEEEEEECCCCCCCCSSEEEEEEEEEEEC-BTTBCSEEEEEECCSSTTTCEEEEEEEECT
T ss_pred -EEEEEeccCCCcccCCCccceeEEEEEEec-CCCCeEEEEECCCCCCccCCCCEEEEEECC
Confidence 88888876532110 111 456777764 45789999997652 45899999876
No 16
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.50 E-value=1.6e-13 Score=92.76 Aligned_cols=73 Identities=30% Similarity=0.461 Sum_probs=63.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCcccceeeee
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAKAKPCPTVPSEPNANATTGEKTTFYFHFQ 122 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.++++.+..
T Consensus 32 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~---------------------------- 83 (106)
T 4amh_A 32 NSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDF---------------------------- 83 (106)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSE----------------------------
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe----------------------------
Confidence 3899999999999999999999999999999999999999999999988766
Q ss_pred eeeeecccCCCCCCCCCceEEEEEEe
Q psy1521 123 VKLVVLRDTVTKEDDLLEFVDVELTK 148 (175)
Q Consensus 123 v~l~v~r~~~~~~~~~~~~~~v~l~k 148 (175)
+.|++.|+... ...++++|.+
T Consensus 84 v~l~v~R~~~~-----~~~~~v~l~~ 104 (106)
T 4amh_A 84 VYLKVAKPGSG-----EKIMEIKLIK 104 (106)
T ss_dssp EEEEEECCSSS-----CSEEEEEEEC
T ss_pred EEEEEEeCCCC-----CeEEEEEEec
Confidence 89999987542 2457777764
No 17
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.48 E-value=1.2e-13 Score=91.14 Aligned_cols=51 Identities=18% Similarity=0.244 Sum_probs=48.9
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+||++|.++|+|+++|+|++||+|++|||+++.+++|.+++++||+.+..
T Consensus 29 ~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g 79 (95)
T 3gge_A 29 YAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKE 79 (95)
T ss_dssp CCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTT
T ss_pred cEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCC
Confidence 579999999999999999999999999999999999999999999998775
No 18
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.46 E-value=9.6e-14 Score=89.57 Aligned_cols=48 Identities=17% Similarity=0.273 Sum_probs=45.5
Q ss_pred EEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 46 LVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 46 ~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+|..+.++|||+++| |++||+|++|||+++.+++|++++++||+++..
T Consensus 26 ~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~ 73 (82)
T 1r6j_A 26 KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTV 73 (82)
T ss_dssp EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCE
Confidence 478999999999999 999999999999999999999999999987777
No 19
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.44 E-value=2e-13 Score=89.22 Aligned_cols=51 Identities=29% Similarity=0.417 Sum_probs=49.4
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
++||..|.++|||+++|+|++||+|++|||+++.+.+|+++..+|++.+..
T Consensus 22 gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~ 72 (88)
T 3e17_A 22 QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGK 72 (88)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 799999999999999999999999999999999999999999999998877
No 20
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.43 E-value=3.2e-14 Score=118.53 Aligned_cols=87 Identities=24% Similarity=0.368 Sum_probs=30.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh---------------------------------------
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK--------------------------------------- 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~--------------------------------------- 42 (175)
+|.|+|||+++| |+.||+|++|||..+.++.+ ....+.
T Consensus 292 ~V~~gspA~~AG-L~~GDvI~~inG~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~~~~~~~~ 368 (448)
T 1ky9_A 292 QVLPNSSAAKAG-IKAGDVITSLNGKPISSFAA--LRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIF 368 (448)
T ss_dssp CCTTCSSSTTTT-CCTTCEECBSSSSBCCSSHH--HHHHTTSSBTTCCCEEEEESSSCEEECCCC---------------
T ss_pred EeccCCHHHHcC-CCCCCEEEEECCEEcCCHHH--HHHHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCccccccccc
Confidence 688999999999 99999999999999998852 222111
Q ss_pred --------------CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 --------------GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 --------------~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||+++| |++||+|++|||+.+. +++++.++|++.+..
T Consensus 369 ~~~~G~~l~~~~~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~--~~~~l~~~l~~~~~~ 431 (448)
T 1ky9_A 369 NGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NIAELRKVLDSKPSV 431 (448)
T ss_dssp ------------------------------------------------------------------
T ss_pred ccccceEeeccCCCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHcCCCe
Confidence 246788999999999999 9999999999999996 467888888865545
No 21
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.41 E-value=3.9e-12 Score=92.35 Aligned_cols=90 Identities=22% Similarity=0.371 Sum_probs=72.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCcccceeeee
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAKAKPCPTVPSEPNANATTGEKTTFYFHFQ 122 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (175)
.+++|..|.++|||+++| |++||+|++|||+.+.+++++.+..+++..... .
T Consensus 27 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~---------------------------~ 78 (166)
T 1w9e_A 27 NGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGE---------------------------K 78 (166)
T ss_dssp TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSS---------------------------E
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCC---------------------------E
Confidence 489999999999999999 999999999999999999887888888876554 2
Q ss_pred eeeeecccCCCCCCCCCceEEEEEEeCCCCCcCEEEEcCcCCCceEEEeccC
Q psy1521 123 VKLVVLRDTVTKEDDLLEFVDVELTKKAGKGFGLSLVGRKQGPGVFISDLVS 174 (175)
Q Consensus 123 v~l~v~r~~~~~~~~~~~~~~v~l~k~~~~~lGfsi~gg~~~~gi~I~~i~~ 174 (175)
+.|++.|.. .+++++|.+.....|||++.. | +|..+.|
T Consensus 79 v~l~vr~~~--------~~~~v~l~~~~~~~lG~~~~~-----g-~v~~v~~ 116 (166)
T 1w9e_A 79 ITMTIRDRP--------FERTITMHKDSTGHVGFIFKN-----G-KITSIVK 116 (166)
T ss_dssp EEEEEECCT--------TCEEEEEECCTTSCCSEEEET-----T-EEEEECT
T ss_pred EEEEEEcCC--------CcEEEEEecCCCCcEeEEEeC-----C-EEEEEcc
Confidence 888884321 347888886556789999872 4 7777655
No 22
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.41 E-value=5.8e-13 Score=90.27 Aligned_cols=49 Identities=35% Similarity=0.589 Sum_probs=47.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
.++||.+|.++|||+++|+|++||+|++|||+++.+++|++++.+|++.
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 81 (108)
T 3cbz_A 33 GGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDI 81 (108)
T ss_dssp CEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 4899999999999999999999999999999999999999999999987
No 23
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.41 E-value=3.8e-13 Score=92.70 Aligned_cols=52 Identities=29% Similarity=0.513 Sum_probs=49.5
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.++||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|++.+..
T Consensus 53 ~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 104 (118)
T 3b76_A 53 LPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSS 104 (118)
T ss_dssp CCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4799999999999999999999999999999999999999999999988766
No 24
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=7.4e-13 Score=90.95 Aligned_cols=51 Identities=24% Similarity=0.368 Sum_probs=48.9
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
++||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|++.+..
T Consensus 50 g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~ 100 (117)
T 1ujd_A 50 GAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGE 100 (117)
T ss_dssp EEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCSSC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCE
Confidence 789999999999999999999999999999999999999999999997766
No 25
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.39 E-value=5.5e-13 Score=90.57 Aligned_cols=49 Identities=27% Similarity=0.487 Sum_probs=47.7
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
++||..|.++|||+++|+|++||+|++|||+++.+++|++++++|++..
T Consensus 42 ~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 42 LVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp SEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 7999999999999999999999999999999999999999999999887
No 26
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.38 E-value=1.3e-12 Score=88.31 Aligned_cols=52 Identities=19% Similarity=0.300 Sum_probs=49.4
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||+++|+|++||+|++|||+++.++++.++..++++.+..
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~ 76 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGK 76 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Confidence 4899999999999999999999999999999999999999999999988777
No 27
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=85.89 Aligned_cols=52 Identities=42% Similarity=0.581 Sum_probs=49.1
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+.++.++..++++.+..
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 80 (92)
T 2qg1_A 29 TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGT 80 (92)
T ss_dssp CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999987766
No 28
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.37 E-value=8.2e-13 Score=87.59 Aligned_cols=52 Identities=19% Similarity=0.304 Sum_probs=49.2
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||+++|+|++||+|++|||+++.++++.++..++++.+..
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~ 82 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGK 82 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCc
Confidence 4899999999999999999999999999999999999999999999988766
No 29
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.37 E-value=1.5e-12 Score=86.04 Aligned_cols=52 Identities=27% Similarity=0.464 Sum_probs=49.1
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 80 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGER 80 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 4899999999999999999999999999999999999999999999987666
No 30
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.37 E-value=1e-12 Score=88.94 Aligned_cols=52 Identities=21% Similarity=0.367 Sum_probs=48.4
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.++||..|.++|||+++|+|++||+|++|||+++.+++|++++.+|+..+..
T Consensus 44 ~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 95 (108)
T 2d92_A 44 SVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPG 95 (108)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 3799999999999999999999999999999999999999999999986543
No 31
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.36 E-value=5.4e-13 Score=93.00 Aligned_cols=48 Identities=38% Similarity=0.627 Sum_probs=46.6
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
++||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|++.
T Consensus 56 gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 56 GIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp EEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999999976
No 32
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=1.2e-12 Score=89.94 Aligned_cols=52 Identities=37% Similarity=0.535 Sum_probs=49.1
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.++++.+..
T Consensus 54 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~ 105 (117)
T 2byg_A 54 NSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEV 105 (117)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4799999999999999999999999999999999999999999999987655
No 33
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.36 E-value=9.1e-13 Score=96.32 Aligned_cols=51 Identities=31% Similarity=0.531 Sum_probs=48.9
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
++||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|++++..
T Consensus 112 gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~ 162 (170)
T 3egg_C 112 GIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGR 162 (170)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCCSE
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 689999999999999999999999999999999999999999999997766
No 34
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.36 E-value=1.4e-12 Score=85.89 Aligned_cols=52 Identities=23% Similarity=0.387 Sum_probs=49.4
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+.+|+++..+|++.+..
T Consensus 28 ~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 79 (93)
T 3o46_A 28 GAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGA 79 (93)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4899999999999999999999999999999999999999999999988766
No 35
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=1.3e-12 Score=88.23 Aligned_cols=52 Identities=35% Similarity=0.491 Sum_probs=49.1
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.++||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++..+..
T Consensus 40 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 91 (107)
T 1wf8_A 40 LGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGN 91 (107)
T ss_dssp EEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHCCSE
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCe
Confidence 3899999999999999999999999999999999999999999999987666
No 36
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.36 E-value=1.4e-12 Score=91.31 Aligned_cols=49 Identities=16% Similarity=0.232 Sum_probs=47.2
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
++||..|.++|||+++|+|++||+|++|||+++.+++|++++.+|++..
T Consensus 66 gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 114 (131)
T 1wfg_A 66 CAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESK 114 (131)
T ss_dssp EEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTS
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 7899999999999999999999999999999999999999999999874
No 37
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.36 E-value=2.4e-12 Score=85.10 Aligned_cols=52 Identities=38% Similarity=0.651 Sum_probs=48.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 33 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 84 (96)
T 1d5g_A 33 GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQV 84 (96)
T ss_dssp SCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCSE
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999986655
No 38
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=2.1e-12 Score=88.79 Aligned_cols=51 Identities=39% Similarity=0.670 Sum_probs=48.9
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.++++.+..
T Consensus 54 gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 104 (117)
T 2fne_A 54 PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGT 104 (117)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSS
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 789999999999999999999999999999999999999999999988777
No 39
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.35 E-value=1.3e-12 Score=91.41 Aligned_cols=51 Identities=22% Similarity=0.427 Sum_probs=48.0
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
++||..|.++|||+++|.|++||+|++|||+++.+++|++++++|+..+..
T Consensus 58 ~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 108 (130)
T 1i16_A 58 PLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG 108 (130)
T ss_dssp CCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSS
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 799999999999999944999999999999999999999999999998765
No 40
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=1.4e-12 Score=89.63 Aligned_cols=51 Identities=24% Similarity=0.343 Sum_probs=48.2
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
++||..|.++|||+++|+|++||+|++|||+++.+++|+++..+|++.+..
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~ 93 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEK 93 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 499999999999999999999999999999999999999999999976665
No 41
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.34 E-value=3.4e-12 Score=82.88 Aligned_cols=51 Identities=29% Similarity=0.501 Sum_probs=47.7
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+++++++..+|+..+..
T Consensus 26 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 76 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSP 76 (87)
T ss_dssp EEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSS
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 378999999999999999 999999999999999999999999999987744
No 42
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.34 E-value=2.3e-12 Score=86.69 Aligned_cols=52 Identities=33% Similarity=0.529 Sum_probs=49.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+.++.+++.++++.+..
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 84 (105)
T 2awx_A 33 NSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTSDF 84 (105)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCCSE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999987655
No 43
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.34 E-value=1.6e-12 Score=89.69 Aligned_cols=51 Identities=27% Similarity=0.526 Sum_probs=48.2
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
++||..|.++|||+++|.|++||+|++|||+++.+++|.+++.+++..+..
T Consensus 54 ~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~ 104 (120)
T 2iwo_A 54 PIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGS 104 (120)
T ss_dssp EEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSE
T ss_pred CEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 789999999999999944999999999999999999999999999998777
No 44
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=1.9e-12 Score=84.52 Aligned_cols=51 Identities=25% Similarity=0.315 Sum_probs=47.2
Q ss_pred CCeEEEEecCCCcccc-cCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAK-DARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~-~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
++++|.+|.++|||++ +| |++||+|++|||+++.+++|+++.++|++.+..
T Consensus 25 ~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~ 76 (88)
T 1kwa_A 25 NHCIVARIMHGGMIHRQGT-LHVGDEIREINGISVANQTVEQLQKMLREMRGS 76 (88)
T ss_dssp GGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEE
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCc
Confidence 3789999999999999 66 999999999999999999999999999987655
No 45
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.34 E-value=2.3e-12 Score=86.83 Aligned_cols=52 Identities=31% Similarity=0.471 Sum_probs=49.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++..+..
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 89 (106)
T 3axa_A 38 LGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSV 89 (106)
T ss_dssp EEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3799999999999999999999999999999999999999999999987666
No 46
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=3.8e-12 Score=85.90 Aligned_cols=52 Identities=33% Similarity=0.563 Sum_probs=48.4
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.++||..|.++|||+++|.|++||+|++|||+++.+++|.+++.+++..+..
T Consensus 41 ~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~ 92 (107)
T 1uhp_A 41 EGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAKEP 92 (107)
T ss_dssp CCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHHCCSS
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 4899999999999999933999999999999999999999999999988777
No 47
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.34 E-value=2.4e-12 Score=86.13 Aligned_cols=52 Identities=33% Similarity=0.530 Sum_probs=49.1
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+..
T Consensus 34 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 85 (102)
T 2i1n_A 34 PGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPV 85 (102)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999987666
No 48
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.34 E-value=1.6e-12 Score=88.57 Aligned_cols=52 Identities=31% Similarity=0.493 Sum_probs=49.4
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.++++.+..
T Consensus 35 ~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 86 (113)
T 2g5m_B 35 LGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGR 86 (113)
T ss_dssp EEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSCSS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCe
Confidence 3899999999999999999999999999999999999999999999998776
No 49
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.33 E-value=2.7e-12 Score=82.95 Aligned_cols=51 Identities=22% Similarity=0.354 Sum_probs=47.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+++|.++..+++..+..
T Consensus 25 ~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 75 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYN 75 (85)
T ss_dssp SCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSC
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCe
Confidence 378999999999999999 999999999999999999999999999887766
No 50
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.33 E-value=2.6e-12 Score=83.85 Aligned_cols=50 Identities=26% Similarity=0.485 Sum_probs=47.2
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++| |++||+|++|||+++.++++.++..++++.+..
T Consensus 28 ~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 77 (89)
T 2q3g_A 28 PLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGER 77 (89)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTE
T ss_pred CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCE
Confidence 78999999999999999 999999999999999999999999999987655
No 51
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.33 E-value=4.9e-12 Score=86.72 Aligned_cols=52 Identities=31% Similarity=0.574 Sum_probs=49.4
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++..+..
T Consensus 50 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~ 101 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNAGNP 101 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHTSCSS
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3899999999999999999999999999999999999999999999987776
No 52
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=2.2e-12 Score=86.57 Aligned_cols=52 Identities=23% Similarity=0.372 Sum_probs=48.4
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC--CCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT--PAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~--~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++++|+.. +..
T Consensus 34 ~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~ 87 (103)
T 1uep_A 34 QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQ 87 (103)
T ss_dssp SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTE
T ss_pred CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCc
Confidence 4789999999999999999999999999999999999999999999986 455
No 53
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.33 E-value=3.6e-12 Score=83.90 Aligned_cols=52 Identities=33% Similarity=0.592 Sum_probs=48.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 33 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 84 (94)
T 2fe5_A 33 NSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDM 84 (94)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCCSE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999987665
No 54
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.33 E-value=1.7e-12 Score=86.38 Aligned_cols=52 Identities=23% Similarity=0.344 Sum_probs=48.7
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++++++.++|+..+..
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~ 87 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGM 87 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEE
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999987554
No 55
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.33 E-value=2.7e-12 Score=84.99 Aligned_cols=52 Identities=27% Similarity=0.495 Sum_probs=48.4
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|++.+..
T Consensus 32 ~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 83 (97)
T 2jil_A 32 RPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQE 83 (97)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3789999999999999999999999999999999999999999999985555
No 56
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.33 E-value=3.3e-12 Score=83.47 Aligned_cols=51 Identities=22% Similarity=0.502 Sum_probs=47.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+++|.++..+|+..+..
T Consensus 28 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDE 78 (90)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSSSE
T ss_pred CCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 389999999999999999 999999999999999999999999999987555
No 57
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.33 E-value=4.3e-12 Score=82.55 Aligned_cols=50 Identities=20% Similarity=0.398 Sum_probs=47.0
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+..
T Consensus 28 ~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 77 (88)
T 2uzc_A 28 PLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGS 77 (88)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred CeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 78999999999999999 999999999999999999999999999987555
No 58
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=2.8e-12 Score=86.25 Aligned_cols=52 Identities=31% Similarity=0.523 Sum_probs=49.2
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+..
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 89 (105)
T 1wha_A 38 AGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPT 89 (105)
T ss_dssp CSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSCCSC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999988666
No 59
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.32 E-value=3.9e-12 Score=84.89 Aligned_cols=52 Identities=40% Similarity=0.602 Sum_probs=48.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..++++.+..
T Consensus 37 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 88 (101)
T 2jik_A 37 SGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYA 88 (101)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTCCSE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4899999999999999999999999999999999999999999999987655
No 60
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.32 E-value=4.3e-12 Score=84.16 Aligned_cols=52 Identities=54% Similarity=0.883 Sum_probs=48.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 81 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQR 81 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4899999999999999999999999999999999999999999999987755
No 61
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.32 E-value=5e-12 Score=84.52 Aligned_cols=48 Identities=21% Similarity=0.405 Sum_probs=45.0
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
+++|..|.++|||+++|.|++||+|++|||+++.+.+++++.++|+..
T Consensus 38 ~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 85 (101)
T 2yt7_A 38 TAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET 85 (101)
T ss_dssp CEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 689999999999999655999999999999999999999999999984
No 62
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.32 E-value=4.2e-12 Score=84.17 Aligned_cols=52 Identities=17% Similarity=0.394 Sum_probs=48.1
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 81 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGET 81 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4889999999999999999999999999999999999999999999965555
No 63
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.32 E-value=4.6e-12 Score=81.87 Aligned_cols=49 Identities=22% Similarity=0.358 Sum_probs=46.6
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
+++|..|.++|||+++|+|++||+|++|||+++.++++.++.+++++..
T Consensus 26 ~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 74 (85)
T 2i04_A 26 FLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP 74 (85)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 6899999999999999999999999999999999999999999999863
No 64
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=6.2e-12 Score=84.15 Aligned_cols=52 Identities=31% Similarity=0.583 Sum_probs=47.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|++.+..
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 90 (103)
T 2fcf_A 39 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNP 90 (103)
T ss_dssp --EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSS
T ss_pred CCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 5899999999999999999999999999999999999999999999987666
No 65
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.31 E-value=5.1e-12 Score=88.64 Aligned_cols=50 Identities=18% Similarity=0.359 Sum_probs=48.0
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
|++|..|.++|||+++| |++||+|++|||+++.+++|.+++.++++.+..
T Consensus 66 gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~ 115 (132)
T 3l4f_D 66 LQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNT 115 (132)
T ss_dssp SEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHHHHHHHHTTTE
T ss_pred CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 79999999999999999 999999999999999999999999999997776
No 66
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.31 E-value=3.6e-12 Score=84.54 Aligned_cols=51 Identities=37% Similarity=0.589 Sum_probs=48.1
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++|+|++||+|++|||+++.++++.++..++++.+..
T Consensus 38 g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 88 (98)
T 1ihj_A 38 GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFK 88 (98)
T ss_dssp EEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCe
Confidence 789999999999999999999999999999999999999999999986555
No 67
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=4.4e-12 Score=83.15 Aligned_cols=50 Identities=18% Similarity=0.292 Sum_probs=47.1
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++| |++||+|++|||+++.++++.++..++++.+..
T Consensus 25 ~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 74 (91)
T 2f5y_A 25 PVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSE 74 (91)
T ss_dssp SCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 68999999999999999 999999999999999999999999999986665
No 68
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.31 E-value=5e-12 Score=82.73 Aligned_cols=51 Identities=22% Similarity=0.316 Sum_probs=47.5
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||+++| |++||+|++|||+.+.++++.++..++++.+..
T Consensus 32 ~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 82 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNK 82 (91)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSTTE
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 489999999999999999 999999999999999999999999999876655
No 69
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.31 E-value=4.9e-12 Score=88.16 Aligned_cols=51 Identities=20% Similarity=0.374 Sum_probs=48.8
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
|++|..|.++|||+++|.|++||+|++|||+++.+.+|.+++.+++..+..
T Consensus 66 gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~ 116 (128)
T 1nf3_C 66 GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRN 116 (128)
T ss_dssp EEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHTTTS
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 799999999999999998999999999999999999999999999988777
No 70
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.31 E-value=3.1e-12 Score=89.10 Aligned_cols=51 Identities=39% Similarity=0.579 Sum_probs=48.5
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecC-CCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFR-NITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~-~~~~~~a~~~lk~~~~~ 94 (175)
++||..|.++|||+++|+|++||+|++|||+++. +++|.+++.+|+..+..
T Consensus 55 gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~ 106 (128)
T 2db5_A 55 DIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGS 106 (128)
T ss_dssp EEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCCSE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCe
Confidence 7999999999999999999999999999999997 99999999999997666
No 71
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.30 E-value=3e-12 Score=82.43 Aligned_cols=50 Identities=16% Similarity=0.214 Sum_probs=47.2
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++| |++||+|++|||+++.+++|.++..+++..+..
T Consensus 24 ~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 73 (83)
T 2kv8_A 24 PCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGV 73 (83)
T ss_dssp SCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSC
T ss_pred CeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 78999999999999999 999999999999999999999999999877666
No 72
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.30 E-value=7e-12 Score=86.88 Aligned_cols=52 Identities=31% Similarity=0.583 Sum_probs=49.5
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||+++|+|++||+|++|||+++.+++++++..+|+..+..
T Consensus 59 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 110 (123)
T 2iwq_A 59 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNP 110 (123)
T ss_dssp CSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 5899999999999999999999999999999999999999999999988766
No 73
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.30 E-value=5.3e-12 Score=83.92 Aligned_cols=50 Identities=22% Similarity=0.301 Sum_probs=47.3
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
|++|..|.++|||+++| |++||+|++|||+++.+++|.++..++++.+..
T Consensus 35 g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 84 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGNK 84 (99)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred CeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCE
Confidence 66899999999999999 999999999999999999999999999987776
No 74
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.30 E-value=4.7e-12 Score=82.75 Aligned_cols=52 Identities=35% Similarity=0.468 Sum_probs=47.7
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..+..
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~ 81 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKE 81 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 3789999999999999933999999999999999999999999999987666
No 75
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.30 E-value=4.3e-12 Score=85.56 Aligned_cols=50 Identities=24% Similarity=0.398 Sum_probs=47.4
Q ss_pred CeEEEEecCCCcccccC-CcCCCCEEEEECCeecCCCCHHHHHHHHHcCCC
Q psy1521 44 GILVHDIYPEGAAAKDA-RLKFGDQILELTGEDFRNITHAKAMAHLRLTPA 93 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G-~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~ 93 (175)
+++|..|.++|||+++| +|++||+|++|||+++.+++|.+++.++++.+.
T Consensus 44 ~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~ 94 (107)
T 3nfk_A 44 PVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCE 94 (107)
T ss_dssp EEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGG
T ss_pred CeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 68999999999999999 699999999999999999999999999998765
No 76
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.30 E-value=5e-12 Score=87.70 Aligned_cols=51 Identities=16% Similarity=0.319 Sum_probs=49.0
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++|+|++||+|++|||+++.+++|.++..++++.+..
T Consensus 46 ~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~ 96 (125)
T 3hpk_A 46 CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 96 (125)
T ss_dssp SEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred CEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 789999999999999999999999999999999999999999999998777
No 77
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.30 E-value=5.9e-12 Score=82.42 Aligned_cols=51 Identities=25% Similarity=0.373 Sum_probs=47.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.++++.++..++++.+..
T Consensus 27 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 77 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDN 77 (91)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 378999999999999999 999999999999999999999999999985555
No 78
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.30 E-value=5.7e-12 Score=83.31 Aligned_cols=50 Identities=18% Similarity=0.412 Sum_probs=47.1
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+..
T Consensus 31 g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 80 (96)
T 2v90_A 31 GQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGSC 80 (96)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 78999999999999999 999999999999999999999999999987545
No 79
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.30 E-value=2.4e-12 Score=84.12 Aligned_cols=50 Identities=26% Similarity=0.452 Sum_probs=47.2
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPA 93 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~ 93 (175)
+++|..|.++|||+++|+|++||+|++|||+++.+.++.++..++++.+.
T Consensus 28 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 77 (90)
T 2q9v_A 28 PIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAK 77 (90)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHH
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 68999999999999999999999999999999999999999999987653
No 80
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.30 E-value=5.2e-12 Score=81.99 Aligned_cols=50 Identities=30% Similarity=0.527 Sum_probs=47.0
Q ss_pred CeEEEEecCCCcccc-cCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAK-DARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~-~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||++ +| |++||+|++|||+++.+++|.+++.++++++..
T Consensus 29 ~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 79 (87)
T 4e34_A 29 PILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 79 (87)
T ss_dssp EEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred CEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 689999999999999 58 999999999999999999999999999987766
No 81
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=3e-12 Score=86.53 Aligned_cols=52 Identities=38% Similarity=0.651 Sum_probs=49.2
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++..+..
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 93 (108)
T 1q7x_A 42 GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQV 93 (108)
T ss_dssp CCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHTTSE
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999997666
No 82
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.30 E-value=4.3e-12 Score=85.18 Aligned_cols=50 Identities=30% Similarity=0.505 Sum_probs=47.7
Q ss_pred CeEEEEecCCCccccc-CCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKD-ARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~-G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++ | |++||+|++|||+++.+++|.+++.++++.+..
T Consensus 36 ~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 86 (103)
T 2dc2_A 36 PILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 86 (103)
T ss_dssp EEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHHHHHCCSE
T ss_pred CEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 7899999999999996 7 999999999999999999999999999998777
No 83
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=5.6e-12 Score=85.43 Aligned_cols=52 Identities=31% Similarity=0.549 Sum_probs=49.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+..
T Consensus 36 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 87 (110)
T 1um1_A 36 PGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKK 87 (110)
T ss_dssp SSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCSE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999987665
No 84
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.29 E-value=3.8e-12 Score=88.21 Aligned_cols=52 Identities=37% Similarity=0.610 Sum_probs=49.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++..+..
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~ 102 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSK 102 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999988766
No 85
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.29 E-value=3.3e-12 Score=87.53 Aligned_cols=52 Identities=37% Similarity=0.533 Sum_probs=48.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecC-CCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFR-NITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~-~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||+++|+|++||+|++|||+++. ++++.+++.+++..+..
T Consensus 49 ~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~ 101 (117)
T 2o2t_A 49 LGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAKDT 101 (117)
T ss_dssp EEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCCSE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCE
Confidence 38999999999999999999999999999999998 89999999999987666
No 86
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=7e-12 Score=84.09 Aligned_cols=52 Identities=29% Similarity=0.533 Sum_probs=48.5
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..+..
T Consensus 38 ~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 89 (104)
T 2djt_A 38 TPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQ 89 (104)
T ss_dssp CCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4789999999999999999999999999999999999999999999986655
No 87
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.28 E-value=8.7e-12 Score=84.90 Aligned_cols=52 Identities=25% Similarity=0.547 Sum_probs=48.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 49 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~ 100 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRR 100 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999986665
No 88
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=8.9e-12 Score=86.25 Aligned_cols=50 Identities=26% Similarity=0.411 Sum_probs=47.2
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++|.++..+|++..
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 93 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVP 93 (123)
T ss_dssp CCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 36999999999999999999999999999999999999999999999854
No 89
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.28 E-value=1.1e-11 Score=81.84 Aligned_cols=50 Identities=38% Similarity=0.624 Sum_probs=46.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||++ | |++||+|++|||+++.+++|.+++.+++..+..
T Consensus 35 ~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 84 (95)
T 1mfg_A 35 DGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNT 84 (95)
T ss_dssp CCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHHCCSE
T ss_pred CCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhcCCCe
Confidence 4899999999999999 8 999999999999999999999999999977666
No 90
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.28 E-value=4.7e-12 Score=85.98 Aligned_cols=52 Identities=33% Similarity=0.578 Sum_probs=48.7
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..++++.+..
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 89 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNS 89 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 3899999999999999999999999999999999999999999999986655
No 91
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=6.2e-12 Score=86.62 Aligned_cols=52 Identities=40% Similarity=0.602 Sum_probs=49.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++..+..
T Consensus 47 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~ 98 (120)
T 2eno_A 47 SGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYA 98 (120)
T ss_dssp CSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHHCSE
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999987666
No 92
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=7.9e-12 Score=82.04 Aligned_cols=52 Identities=29% Similarity=0.479 Sum_probs=48.1
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++..+..
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 81 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGS 81 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 4899999999999999955999999999999999999999999999987666
No 93
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=1.2e-11 Score=81.10 Aligned_cols=51 Identities=24% Similarity=0.347 Sum_probs=47.6
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|.|++||+|++|||+++ +.+++++.++|++.+..
T Consensus 29 ~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~ 79 (91)
T 2e7k_A 29 GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGS 79 (91)
T ss_dssp SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCe
Confidence 5899999999999999877999999999999999 88999999999987666
No 94
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.28 E-value=8.2e-12 Score=87.15 Aligned_cols=49 Identities=22% Similarity=0.358 Sum_probs=47.0
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++++|++..
T Consensus 44 ~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~ 92 (129)
T 2kpk_A 44 FLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP 92 (129)
T ss_dssp EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 5899999999999999999999999999999999999999999999874
No 95
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.27 E-value=9.8e-12 Score=82.24 Aligned_cols=51 Identities=18% Similarity=0.219 Sum_probs=47.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+++|+++..+|++.+..
T Consensus 37 ~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 87 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIKASGNV 87 (96)
T ss_dssp EEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTE
T ss_pred CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 378999999999999999 999999999999999999999999999987655
No 96
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.27 E-value=8.3e-12 Score=83.63 Aligned_cols=52 Identities=35% Similarity=0.518 Sum_probs=49.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 86 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 86 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3899999999999999999999999999999999999999999999987766
No 97
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.27 E-value=1.1e-11 Score=81.16 Aligned_cols=52 Identities=25% Similarity=0.414 Sum_probs=48.2
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..++++.+..
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 74 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGK 74 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 4789999999999999999999999999999999988999999999986655
No 98
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=4.8e-12 Score=85.01 Aligned_cols=47 Identities=28% Similarity=0.333 Sum_probs=45.4
Q ss_pred eEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 45 ILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 45 i~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
+||..|.+++||+++|+|++||+|++|||+++.+++|++++++|++.
T Consensus 34 ~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 80 (103)
T 1ufx_A 34 PRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEA 80 (103)
T ss_dssp CEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHH
T ss_pred EEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 49999999999999999999999999999999999999999999985
No 99
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.27 E-value=5.9e-12 Score=85.02 Aligned_cols=52 Identities=27% Similarity=0.431 Sum_probs=48.4
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 44 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 95 (108)
T 2jre_A 44 TGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNAGNP 95 (108)
T ss_dssp CCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHHCSE
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3899999999999999999999999999999999999999999999985555
No 100
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.27 E-value=1.2e-11 Score=82.98 Aligned_cols=50 Identities=32% Similarity=0.599 Sum_probs=47.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.+++||+++| |++||+|++|||+.+.++++++++.+|+. +..
T Consensus 41 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~ 90 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-ARE 90 (104)
T ss_dssp CCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-SSS
T ss_pred CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-CCE
Confidence 479999999999999999 99999999999999999999999999998 555
No 101
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=9.7e-12 Score=81.96 Aligned_cols=51 Identities=24% Similarity=0.259 Sum_probs=47.5
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.+++||+++| |++||+|++|||+++.++++.++..+++..+..
T Consensus 32 ~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 82 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDH 82 (94)
T ss_dssp SCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 378999999999999999 999999999999999999999999999886666
No 102
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.27 E-value=6.8e-12 Score=82.70 Aligned_cols=50 Identities=22% Similarity=0.414 Sum_probs=48.0
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++| |++||+|++|||+++.+++|+++..+|++.+..
T Consensus 30 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 79 (95)
T 3r68_A 30 GQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQ 79 (95)
T ss_dssp SEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 89999999999999999 999999999999999999999999999997766
No 103
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=2.7e-12 Score=87.25 Aligned_cols=52 Identities=33% Similarity=0.597 Sum_probs=48.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++..+..
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~g~~ 95 (111)
T 1uju_A 44 EGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDT 95 (111)
T ss_dssp CCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSSCSSE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3799999999999999999999999999999999999999999999987655
No 104
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.26 E-value=1.2e-11 Score=83.65 Aligned_cols=50 Identities=18% Similarity=0.359 Sum_probs=47.5
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
|++|..|.++|||+++| |++||+|++|||+++.+++|.++..++++.+..
T Consensus 46 gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 95 (109)
T 1q3o_A 46 LQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNT 95 (109)
T ss_dssp SEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTE
T ss_pred CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCE
Confidence 78999999999999999 999999999999999999999999999987665
No 105
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.26 E-value=1.4e-11 Score=82.48 Aligned_cols=51 Identities=29% Similarity=0.476 Sum_probs=47.1
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||+++| |++||+|++|||+++.+.+|+++..++++....
T Consensus 45 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~ 95 (104)
T 3sfj_A 45 KGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEE 95 (104)
T ss_dssp CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCTTCS
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 489999999999999999 999999999999999999999999999875443
No 106
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.26 E-value=1.3e-11 Score=83.12 Aligned_cols=50 Identities=28% Similarity=0.455 Sum_probs=46.7
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
++||..|.++|||+++| |++||+|++|||+++.+++|.++..++++.+..
T Consensus 44 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 93 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQVVDLIRAGEKE 93 (107)
T ss_dssp CEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCSSE
T ss_pred ceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 45799999999999999 999999999999999999999999999987666
No 107
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.26 E-value=9e-12 Score=85.16 Aligned_cols=52 Identities=54% Similarity=0.876 Sum_probs=48.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 94 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQK 94 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSE
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4899999999999999999999999999999999999999999999987755
No 108
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.26 E-value=1.3e-11 Score=83.66 Aligned_cols=49 Identities=39% Similarity=0.649 Sum_probs=46.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 87 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRST 87 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred cCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4899999999999999999999999999999999999999999999985
No 109
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=7.8e-12 Score=82.43 Aligned_cols=51 Identities=27% Similarity=0.462 Sum_probs=47.6
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+++|.++..+++..+..
T Consensus 30 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 80 (94)
T 1vb7_A 30 TPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASP 80 (94)
T ss_dssp EEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSS
T ss_pred CCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 378999999999999999 999999999999999999999999999987655
No 110
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.26 E-value=2.3e-11 Score=79.98 Aligned_cols=50 Identities=30% Similarity=0.475 Sum_probs=45.5
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++ .+..
T Consensus 29 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~ 78 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAY 78 (93)
T ss_dssp SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SSSE
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CCCE
Confidence 488999999999999999 9999999999999999999999888887 3555
No 111
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.26 E-value=1.9e-11 Score=79.96 Aligned_cols=51 Identities=25% Similarity=0.424 Sum_probs=48.1
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.++++.++..++++.+..
T Consensus 27 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 77 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNA 77 (91)
T ss_dssp SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 389999999999999999 999999999999999999999999999987665
No 112
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.26 E-value=4.6e-12 Score=82.99 Aligned_cols=51 Identities=18% Similarity=0.292 Sum_probs=46.2
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+++++++..+|+..+..
T Consensus 27 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 77 (91)
T 2vsp_A 27 PGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKN 77 (91)
T ss_dssp SCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSE
T ss_pred CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 378999999999999999 999999999999999999999999999987444
No 113
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.26 E-value=7.7e-12 Score=84.16 Aligned_cols=51 Identities=25% Similarity=0.319 Sum_probs=47.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+++|.++..++++.+..
T Consensus 26 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 76 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNS 76 (106)
T ss_dssp CSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTE
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCE
Confidence 378999999999999999 999999999999999999999999999977666
No 114
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.25 E-value=1.8e-11 Score=80.91 Aligned_cols=51 Identities=29% Similarity=0.549 Sum_probs=47.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+.++.++...++..+..
T Consensus 34 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 84 (97)
T 2w4f_A 34 EGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGTA 84 (97)
T ss_dssp CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCCCCe
Confidence 589999999999999999 999999999999999999999998888876666
No 115
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.25 E-value=1.5e-11 Score=78.47 Aligned_cols=52 Identities=25% Similarity=0.414 Sum_probs=47.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..++++....
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 72 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGK 72 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTE
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCe
Confidence 4789999999999999999999999999999999999999999999976555
No 116
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.25 E-value=7.2e-12 Score=86.16 Aligned_cols=48 Identities=29% Similarity=0.458 Sum_probs=44.9
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
.++|.+|.++|||+++|.|++||+|++|||+++.+++|++++++|++.
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKA 91 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 589999999999999944999999999999999999999999999865
No 117
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.25 E-value=1.4e-11 Score=84.01 Aligned_cols=51 Identities=25% Similarity=0.403 Sum_probs=47.9
Q ss_pred CCeEEEEecCCCcccccCCc-CCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARL-KFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L-~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| | ++||+|++|||+.+.+++++++..+|+..+..
T Consensus 48 ~gv~V~~V~~~spA~~aG-ll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 99 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSG-LLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGT 99 (113)
T ss_dssp SSEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEE
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 589999999999999999 6 99999999999999999999999999987765
No 118
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.24 E-value=1.1e-11 Score=86.36 Aligned_cols=52 Identities=21% Similarity=0.418 Sum_probs=48.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|++.+..
T Consensus 46 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 97 (129)
T 2dmz_A 46 SGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNAGQV 97 (129)
T ss_dssp CEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHCCSS
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999996655
No 119
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.24 E-value=1.1e-11 Score=85.24 Aligned_cols=52 Identities=29% Similarity=0.592 Sum_probs=49.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++..+..
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~ 93 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREP 93 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 3799999999999999999999999999999999999999999999988776
No 120
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.24 E-value=1.7e-11 Score=82.00 Aligned_cols=51 Identities=22% Similarity=0.399 Sum_probs=47.7
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.++++.++..++++.+..
T Consensus 30 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 80 (102)
T 2d90_A 30 KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQ 80 (102)
T ss_dssp SSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTE
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 389999999999999999 999999999999999999999999999987666
No 121
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=2.5e-11 Score=82.20 Aligned_cols=51 Identities=29% Similarity=0.549 Sum_probs=47.6
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+.+.+.++.++...++..+..
T Consensus 46 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 96 (110)
T 1x5q_A 46 EGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGTA 96 (110)
T ss_dssp CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHSCCSE
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhhCCCCe
Confidence 489999999999999999 999999999999999999999999999886666
No 122
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=2.8e-11 Score=82.51 Aligned_cols=50 Identities=24% Similarity=0.355 Sum_probs=46.6
Q ss_pred CeEEEEecCCCcccc-cCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAK-DARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~-~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||++ +| |++||+|++|||+++.+++|.++..+|++.+..
T Consensus 44 ~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 94 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKLIKDAGLS 94 (114)
T ss_dssp SCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHHHHHTTTE
T ss_pred CeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 569999999999999 88 999999999999999999999999999985555
No 123
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=5.1e-12 Score=84.51 Aligned_cols=51 Identities=31% Similarity=0.629 Sum_probs=47.9
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++|+|++||+|++|||+++.+++|.++..+++..+..
T Consensus 37 ~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 87 (103)
T 1wfv_A 37 DLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRR 87 (103)
T ss_dssp EEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 789999999999999999999999999999999999999999999966666
No 124
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.23 E-value=2.9e-12 Score=104.98 Aligned_cols=91 Identities=21% Similarity=0.361 Sum_probs=55.4
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCcccceeeeee
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAKAKPCPTVPSEPNANATTGEKTTFYFHFQV 123 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (175)
+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++..+... .+
T Consensus 233 g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~--------------------------~v 286 (388)
T 3suz_A 233 TVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQT--------------------------QV 286 (388)
T ss_dssp CCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCS--------------------------CE
T ss_pred CEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCC--------------------------cc
Confidence 4899999999999999999999999999999999999999999998864331 27
Q ss_pred eeeecccCCCCCCCCCceEEEEEE-eCCCCCcCEEEEcCcCCCceEEEeccC
Q psy1521 124 KLVVLRDTVTKEDDLLEFVDVELT-KKAGKGFGLSLVGRKQGPGVFISDLVS 174 (175)
Q Consensus 124 ~l~v~r~~~~~~~~~~~~~~v~l~-k~~~~~lGfsi~gg~~~~gi~I~~i~~ 174 (175)
.|++.|.... +++++. +....+|||++.++ ||..|.|
T Consensus 287 ~l~v~r~~~~--------~~v~l~~~~~~~~lG~~i~~g------~I~~V~~ 324 (388)
T 3suz_A 287 KLNIVSCPPV--------TTVLIKRPDLKYQLGFSVQNG------IICSLMR 324 (388)
T ss_dssp EEEEEECCSC--------C---------------------------------
T ss_pred cccccccccc--------ceeeEeecCCCCccceEEecC------EEEEeec
Confidence 8888876432 445552 23456799998753 5555543
No 125
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=1.5e-11 Score=80.60 Aligned_cols=48 Identities=19% Similarity=0.409 Sum_probs=45.4
Q ss_pred EEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 46 LVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 46 ~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+|..|.++|||+++| |++||+|++|||+++.+.++.++.++|++.+..
T Consensus 34 ~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~ 81 (90)
T 1y7n_A 34 IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGE 81 (90)
T ss_dssp EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEE
T ss_pred EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 899999999999999 999999999999999999999999999977655
No 126
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=2.9e-11 Score=80.53 Aligned_cols=51 Identities=25% Similarity=0.365 Sum_probs=47.2
Q ss_pred hCCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 42 KGGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 42 ~~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
..+++|..|.++|||+++| |++||+|++|||+.+.++++.+++..++. +..
T Consensus 35 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~ 85 (100)
T 2eeh_A 35 GLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-SSR 85 (100)
T ss_dssp TCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-CSS
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-CCE
Confidence 3589999999999999999 99999999999999999999999999987 555
No 127
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.23 E-value=1.5e-11 Score=82.39 Aligned_cols=50 Identities=38% Similarity=0.624 Sum_probs=47.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||++ | |++||+|++|||+++.++++.+++.+++..+..
T Consensus 43 ~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 92 (103)
T 1n7t_A 43 DGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNT 92 (103)
T ss_dssp CSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHHHHHCCSE
T ss_pred CCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHHhhcCCCe
Confidence 4899999999999999 8 999999999999999999999999999987766
No 128
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.23 E-value=2.1e-11 Score=80.46 Aligned_cols=52 Identities=33% Similarity=0.569 Sum_probs=48.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 33 ~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 84 (97)
T 2iwn_A 33 SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQT 84 (97)
T ss_dssp CCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSE
T ss_pred CCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999999999999999999999999999999999886555
No 129
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.22 E-value=2e-11 Score=80.98 Aligned_cols=51 Identities=20% Similarity=0.395 Sum_probs=47.4
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.++++.++..+|++....
T Consensus 33 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (98)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 389999999999999999 999999999999999999999999999987544
No 130
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.22 E-value=9e-12 Score=83.12 Aligned_cols=51 Identities=18% Similarity=0.289 Sum_probs=47.7
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.+++||+++| |++||+|++|||+.+.++++.++..+++..+..
T Consensus 36 ~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 86 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSE 86 (100)
T ss_dssp SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSE
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 478999999999999999 999999999999999999999999999987666
No 131
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.22 E-value=1.3e-11 Score=84.17 Aligned_cols=51 Identities=25% Similarity=0.319 Sum_probs=47.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+.++.++..++++.+..
T Consensus 38 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 88 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNS 88 (114)
T ss_dssp CSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSE
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 489999999999999999 999999999999999999999999999987655
No 132
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.22 E-value=2.6e-11 Score=83.70 Aligned_cols=49 Identities=39% Similarity=0.639 Sum_probs=46.6
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+++++++.++++..
T Consensus 58 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 106 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRST 106 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 4799999999999999999999999999999999999999999999975
No 133
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=1.1e-11 Score=85.13 Aligned_cols=49 Identities=22% Similarity=0.370 Sum_probs=46.3
Q ss_pred CeEEEEecCCCccccc--CCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCC
Q psy1521 44 GILVHDIYPEGAAAKD--ARLKFGDQILELTGEDFRNITHAKAMAHLRLTPA 93 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~--G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~ 93 (175)
+++|..|.++|||+++ | |++||+|++|||+++.+++|.+++.+++..+.
T Consensus 42 ~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~ 92 (119)
T 2cs5_A 42 PVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVLFIKASCE 92 (119)
T ss_dssp EEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 6899999999999999 7 99999999999999999999999999998754
No 134
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.22 E-value=3.6e-11 Score=81.57 Aligned_cols=50 Identities=22% Similarity=0.219 Sum_probs=46.8
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++| |++||+|++|||+++.+++++++.+++++.+..
T Consensus 45 ~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~ 94 (109)
T 2vsv_A 45 PVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGED 94 (109)
T ss_dssp SCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTS
T ss_pred CeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 67899999999999999 999999999999999999999999999987664
No 135
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.22 E-value=1.2e-11 Score=82.84 Aligned_cols=50 Identities=18% Similarity=0.396 Sum_probs=46.9
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+..
T Consensus 30 ~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 79 (103)
T 1wf7_A 30 PLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGS 79 (103)
T ss_dssp EEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSE
T ss_pred CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 58999999999999999 999999999999999999999999999987666
No 136
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.21 E-value=1.2e-11 Score=86.08 Aligned_cols=49 Identities=20% Similarity=0.245 Sum_probs=46.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+.+|.+++.+|++.
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~ 97 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNI 97 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSC
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 3678999999999999999999999999999999989999999999974
No 137
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=1.3e-11 Score=81.74 Aligned_cols=50 Identities=26% Similarity=0.317 Sum_probs=46.5
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+ +| |++||+|++|||+++.+++|.+++.+++..+..
T Consensus 31 ~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~ 80 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAEDS 80 (96)
T ss_dssp SSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSC
T ss_pred CCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 488999999999996 77 999999999999999999999999999987777
No 138
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.20 E-value=4.1e-11 Score=84.72 Aligned_cols=49 Identities=31% Similarity=0.487 Sum_probs=46.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
.|++|..|.++|||+++| |++||+|++|||+++.++++.++..+|++..
T Consensus 64 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 112 (139)
T 2vz5_A 64 KGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRS 112 (139)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHCCTT
T ss_pred CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCC
Confidence 589999999999999999 9999999999999999999999999998744
No 139
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.20 E-value=1.5e-11 Score=82.38 Aligned_cols=50 Identities=28% Similarity=0.390 Sum_probs=46.7
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++| |++||+|++|||+.+.++++.++..+|+..+..
T Consensus 30 ~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 79 (103)
T 1v5l_A 30 PLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQ 79 (103)
T ss_dssp EEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSE
T ss_pred CeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 68999999999999999 999999999999999999999999999987444
No 140
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.19 E-value=9.2e-11 Score=86.94 Aligned_cols=50 Identities=38% Similarity=0.624 Sum_probs=47.7
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||++ | |++||+|++|||+++.+++|.+++.+++..+..
T Consensus 24 ~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 73 (195)
T 2qbw_A 24 DGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNT 73 (195)
T ss_dssp CSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred CCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4899999999999999 8 999999999999999999999999999998776
No 141
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.19 E-value=1.7e-10 Score=86.81 Aligned_cols=96 Identities=15% Similarity=0.169 Sum_probs=70.3
Q ss_pred CeEEEEecCCCcccccCCcCCC-CEEEEECCeecCCCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCCCCCCcccceeee
Q psy1521 44 GILVHDIYPEGAAAKDARLKFG-DQILELTGEDFRNITHAKAMAHLRL-TPAKAKPCPTVPSEPNANATTGEKTTFYFHF 121 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~G-D~Il~VNG~~l~~~~~~~a~~~lk~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (175)
|++|..|.++|||+++| |++| |+|++|||+.+.++++... .+++. .+..
T Consensus 17 G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~-~~~~~~~g~~--------------------------- 67 (209)
T 3rle_A 17 GYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLK-DLLKANVEKP--------------------------- 67 (209)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHH-HHHHHTTTSC---------------------------
T ss_pred EEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHH-HHHhcCCCCE---------------------------
Confidence 78999999999999999 9999 9999999999988765433 34443 3444
Q ss_pred eeeeeecccCCCCCCCCCceEEEEEEeC----CCCCcCEEEEcCc----CCCceEEEeccCC
Q psy1521 122 QVKLVVLRDTVTKEDDLLEFVDVELTKK----AGKGFGLSLVGRK----QGPGVFISDLVSE 175 (175)
Q Consensus 122 ~v~l~v~r~~~~~~~~~~~~~~v~l~k~----~~~~lGfsi~gg~----~~~gi~I~~i~~~ 175 (175)
+.+++.|+... ..++++|... ....||+++..-. ...|++|..|.|.
T Consensus 68 -v~l~v~R~~~~------~~~~v~l~p~~~~~~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~ 122 (209)
T 3rle_A 68 -VKMLIYSSKTL------ELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESN 122 (209)
T ss_dssp -EEEEEEETTTC------CEEEEEECCCSSSSSSSSSCEEEEEEECTTGGGSCEEEEEECTT
T ss_pred -EEEEEEecCCc------eEEEEEEcccccccccCccceEEeecChhHccccceEEEEeCCC
Confidence 88998886432 3466776432 2346899987421 2368999998763
No 142
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=1.5e-11 Score=82.72 Aligned_cols=51 Identities=22% Similarity=0.547 Sum_probs=47.7
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+++|.++..+++..+..
T Consensus 32 ~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 82 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSGSR 82 (106)
T ss_dssp CSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHCSE
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 488999999999999999 999999999999999999999999999877666
No 143
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.18 E-value=5.3e-11 Score=82.53 Aligned_cols=47 Identities=38% Similarity=0.531 Sum_probs=44.7
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
.+++|..|.++|||+++| |++||+|++|||+.+.+++++++..+|++
T Consensus 51 ~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 97 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLD 97 (124)
T ss_dssp SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 489999999999999999 99999999999999999999999998885
No 144
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=2.2e-11 Score=81.18 Aligned_cols=49 Identities=18% Similarity=0.289 Sum_probs=45.3
Q ss_pred CeEEEEecCCCccccc-CCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKD-ARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~-G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++ | |++||+|++|||+++.+. +.+++.++++.+..
T Consensus 36 ~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~ 85 (100)
T 2edp_A 36 PLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGS-RQEALILIKGSFRI 85 (100)
T ss_dssp EEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSC-SHHHHHHHHTCCSS
T ss_pred CeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccch-HHHHHHHHHhCCCe
Confidence 6899999999999999 7 999999999999999987 89999999987666
No 145
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.17 E-value=4.4e-11 Score=82.60 Aligned_cols=50 Identities=22% Similarity=0.297 Sum_probs=46.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
.+++|..|.+++||+++|+|++||+|++|||+.+.+++++++.++|+...
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 94 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 94 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHT
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 36899999999999999999999999999999999999999999999764
No 146
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.17 E-value=2.7e-11 Score=82.99 Aligned_cols=50 Identities=24% Similarity=0.458 Sum_probs=46.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+ +| |++||+|++|||+++.+++|.+++.++++.+..
T Consensus 46 ~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~~~~~~ 95 (117)
T 2csj_A 46 TSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLRKSGKI 95 (117)
T ss_dssp CBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHHHSCSE
T ss_pred CCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHhcCCCe
Confidence 379999999999997 77 999999999999999999999999999987666
No 147
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.17 E-value=5.5e-11 Score=81.61 Aligned_cols=52 Identities=35% Similarity=0.518 Sum_probs=48.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 89 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 89 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 5899999999999999999999999999999999999999999999887766
No 148
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=9e-12 Score=86.57 Aligned_cols=51 Identities=24% Similarity=0.365 Sum_probs=47.6
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+|+..+..
T Consensus 61 ~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 111 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAG-LCTGDRIIKVNGESVIGKTYSQVIALIQNSDTT 111 (126)
T ss_dssp CCCCBCCCCSSSHHHHHT-CCSSCCCCEETTEECSSCCHHHHHHHHHTCTTE
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 368999999999999999 999999999999999999999999999987555
No 149
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.17 E-value=1.2e-10 Score=79.03 Aligned_cols=50 Identities=24% Similarity=0.399 Sum_probs=46.1
Q ss_pred CCeEEEEecCCCcccccCCc-CCCCEEEEECCeecCCCCHHHHHHHHHcCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARL-KFGDQILELTGEDFRNITHAKAMAHLRLTPA 93 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L-~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~ 93 (175)
.+++|..|.++|||+++| | ++||+|++|||+.+.+++++++..+++....
T Consensus 26 ~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g 76 (112)
T 1qau_A 26 PPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS 76 (112)
T ss_dssp SCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHSCS
T ss_pred CCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 389999999999999999 7 9999999999999999999999999987543
No 150
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=4.7e-11 Score=81.74 Aligned_cols=51 Identities=29% Similarity=0.464 Sum_probs=46.5
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.+++||+++| |++||+|++|||+++.++++.++..+++..+..
T Consensus 42 ~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~ 92 (117)
T 1uit_A 42 GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDT 92 (117)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSE
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 489999999999999999 999999999999999999999988777766655
No 151
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.16 E-value=9.9e-11 Score=79.95 Aligned_cols=52 Identities=15% Similarity=0.303 Sum_probs=48.5
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++|+|++||+|++|||+++.+.++.++..+++..+..
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~ 101 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 101 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3799999999999999999999999999999999999999999999987665
No 152
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.16 E-value=1.3e-10 Score=78.16 Aligned_cols=50 Identities=26% Similarity=0.430 Sum_probs=45.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+ +| |++||+|++|||+++.++++.++...+++.+..
T Consensus 39 ~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 88 (107)
T 2h2b_A 39 TSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKN 88 (107)
T ss_dssp CCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred CCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhhCCCCE
Confidence 389999999999999 88 999999999999999999999998888876666
No 153
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.14 E-value=6e-11 Score=92.18 Aligned_cols=53 Identities=36% Similarity=0.493 Sum_probs=49.1
Q ss_pred CeEEEEecCCCcccc-cCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCCCCC
Q psy1521 44 GILVHDIYPEGAAAK-DARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAKAKP 97 (175)
Q Consensus 44 gi~V~~v~~gg~A~~-~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~~~~ 97 (175)
++||..|.++|||++ +| |++||+|++|||+++.+++|.+++.+|++.+..+++
T Consensus 104 gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~L 157 (263)
T 1z87_A 104 PILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVL 157 (263)
T ss_dssp EEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCCE
T ss_pred CEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEE
Confidence 799999999999999 56 999999999999999999999999999998777553
No 154
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.14 E-value=5.6e-11 Score=77.49 Aligned_cols=47 Identities=17% Similarity=0.243 Sum_probs=43.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
.+++|..|.++|||+++| |++||+|++|||+.+.+.++.++..+++.
T Consensus 28 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAK 74 (90)
T ss_dssp TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHh
Confidence 478999999999999999 99999999999999987889999999985
No 155
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.13 E-value=1.6e-10 Score=74.96 Aligned_cols=45 Identities=29% Similarity=0.448 Sum_probs=39.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
.+++|..+ ++|||+ +| |++||+|++|||+++.+++|+++..++++
T Consensus 27 ~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 71 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVE 71 (88)
T ss_dssp SSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred CcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 47888887 999999 88 99999999999999999999999999985
No 156
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.13 E-value=7.2e-11 Score=77.88 Aligned_cols=47 Identities=26% Similarity=0.369 Sum_probs=44.7
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+++++++..++++
T Consensus 35 ~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~ 81 (94)
T 3kzd_A 35 RRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ 81 (94)
T ss_dssp CEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 379999999999999999 99999999999999999999999999984
No 157
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=1.1e-10 Score=77.74 Aligned_cols=47 Identities=36% Similarity=0.547 Sum_probs=43.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
.+++|..|.+++||+++| |++||+|++|||+.+.++++.+++..++.
T Consensus 35 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 81 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG 81 (101)
T ss_dssp CCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC
Confidence 489999999999999999 99999999999999999999887777654
No 158
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.12 E-value=8.3e-11 Score=87.35 Aligned_cols=49 Identities=22% Similarity=0.478 Sum_probs=46.6
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||+++| |++||+|++|||.++.+++|.+++.+++. +..
T Consensus 111 ~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~ 159 (192)
T 3k1r_A 111 GLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-EKT 159 (192)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-SSE
T ss_pred CEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-CCe
Confidence 78999999999999999 99999999999999999999999999998 555
No 159
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.11 E-value=6.7e-11 Score=79.32 Aligned_cols=51 Identities=18% Similarity=0.189 Sum_probs=47.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.+++++++..+|++.+..
T Consensus 48 ~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 98 (104)
T 2z17_A 48 MFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRSSGNL 98 (104)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHHTTTE
T ss_pred CCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCc
Confidence 489999999999999999 999999999999999999999999999987555
No 160
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.11 E-value=6.4e-11 Score=76.23 Aligned_cols=41 Identities=27% Similarity=0.431 Sum_probs=38.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
++.++|||+++| |+.||+|++|||+++.+++|++++++|+.
T Consensus 29 ~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~ 69 (82)
T 1r6j_A 29 SIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILST 69 (82)
T ss_dssp EECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhc
Confidence 578999999999 99999999999999999999999999973
No 161
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=6e-11 Score=81.09 Aligned_cols=46 Identities=26% Similarity=0.384 Sum_probs=44.1
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
+++|..|.++|||+++| |++||+|++|||+++.+++|.++..+++.
T Consensus 45 gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 90 (114)
T 2d8i_A 45 RLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ 90 (114)
T ss_dssp EEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS
T ss_pred CEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 78999999999999999 99999999999999999999999999985
No 162
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.11 E-value=4.4e-10 Score=76.32 Aligned_cols=65 Identities=20% Similarity=0.344 Sum_probs=52.0
Q ss_pred CeeCCCCCHHHHHHH-h--------hCCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 26 GTDVRDKSQEEVATI-M--------KGGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 26 g~~v~~~~~~~~~~~-l--------~~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
|..+.+++.+.+..+ + ..|++|..|.++|||+++| |++||+|++|||+.+. +..++..+++. +..
T Consensus 9 Gi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~ 82 (113)
T 2pzd_A 9 GVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQ 82 (113)
T ss_dssp CEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-CSS
T ss_pred EEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CCe
Confidence 556666666554443 2 3689999999999999999 9999999999999996 46888888887 444
No 163
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=5.9e-11 Score=80.59 Aligned_cols=52 Identities=37% Similarity=0.529 Sum_probs=48.5
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.+++||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~ 90 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQS 90 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 4889999999999999999999999999999999999999999999976665
No 164
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.09 E-value=3.3e-10 Score=77.14 Aligned_cols=46 Identities=28% Similarity=0.367 Sum_probs=41.4
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
+.+|.+|.+ +|+.+| |++||+|++|||+++.+++|++++++|++++
T Consensus 35 g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~ 80 (113)
T 3soe_A 35 GQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFP 80 (113)
T ss_dssp EEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred CcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 568999988 477777 9999999999999999999999999999864
No 165
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=5.7e-10 Score=73.80 Aligned_cols=46 Identities=26% Similarity=0.395 Sum_probs=42.1
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
|++|..|.++ |+++| |++||+|++|||+++.+++|++++++|+...
T Consensus 33 Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 78 (96)
T 1ujv_A 33 GQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCP 78 (96)
T ss_dssp EEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred CEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 7899999983 77888 9999999999999999999999999999864
No 166
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=2.4e-10 Score=79.38 Aligned_cols=48 Identities=40% Similarity=0.607 Sum_probs=44.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
.+++|..|.++|||+++| |++||+|++|||+.+.++++.+++..++..
T Consensus 46 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 93 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS 93 (128)
T ss_dssp CCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC
T ss_pred CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 489999999999999999 999999999999999999998898888764
No 167
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.08 E-value=3.5e-11 Score=79.00 Aligned_cols=44 Identities=18% Similarity=0.400 Sum_probs=39.4
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
|++|..|.++|||++ | |++||+|++|||+.+.+ ..++..++++.
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~ 45 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSK 45 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSC
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcC
Confidence 678899999999999 8 99999999999999964 67888888865
No 168
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.07 E-value=1.3e-10 Score=79.07 Aligned_cols=50 Identities=26% Similarity=0.321 Sum_probs=46.7
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.+++||+++| |++||+|++|||+++.+++|+++.++|++.+..
T Consensus 37 ~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~ 86 (111)
T 1vae_A 37 PVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGE 86 (111)
T ss_dssp SCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTS
T ss_pred CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 67899999999999999 999999999999999988999999999987664
No 169
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.07 E-value=2.2e-10 Score=78.69 Aligned_cols=51 Identities=20% Similarity=0.363 Sum_probs=47.1
Q ss_pred CCeEEEEecC--CCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYP--EGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~--gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.+ ++||+++| |++||+|++|||+.+.+++|+++..+|+..+..
T Consensus 44 ~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~ 96 (118)
T 2yub_A 44 TTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQTSQT 96 (118)
T ss_dssp CEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSC
T ss_pred CcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhCCCE
Confidence 4899999999 99999999 999999999999999999999999999987444
No 170
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.07 E-value=2.8e-10 Score=78.99 Aligned_cols=51 Identities=20% Similarity=0.395 Sum_probs=47.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.++|||+++| |++||+|++|||+++.++++.++..+|+.....
T Consensus 33 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (128)
T ss_dssp CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCSE
T ss_pred CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 389999999999999999 999999999999999999999999999987444
No 171
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.06 E-value=4.4e-10 Score=76.25 Aligned_cols=65 Identities=17% Similarity=0.364 Sum_probs=50.5
Q ss_pred CeeCCCCCHHHHHHH-h--------hCCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 26 GTDVRDKSQEEVATI-M--------KGGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 26 g~~v~~~~~~~~~~~-l--------~~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
|..+.+++.+.+..+ + ..|++|..|.++|||+++| |++||+|++|||+.+.+ ..+....++. +..
T Consensus 9 Gi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-g~~ 82 (112)
T 2p3w_A 9 GIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVLT-ESP 82 (112)
T ss_dssp CEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH-CSS
T ss_pred eEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHhC-CCe
Confidence 556666666544433 1 3689999999999999999 99999999999999964 6778777753 445
No 172
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.05 E-value=4.8e-10 Score=76.25 Aligned_cols=50 Identities=34% Similarity=0.616 Sum_probs=46.1
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.+++|..|.+++||+++| |++||+|++|||+++.++++.++..+++.. ..
T Consensus 41 ~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~ 90 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RS 90 (114)
T ss_dssp CSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC-SS
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-Ce
Confidence 489999999999999999 999999999999999999998899999875 45
No 173
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.04 E-value=4.8e-10 Score=74.56 Aligned_cols=47 Identities=13% Similarity=0.169 Sum_probs=43.9
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
+.+|..|.++|||+++| |++||+|++|||..+...+++++...+++.
T Consensus 40 ~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~ 86 (101)
T 3qik_A 40 AVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQS 86 (101)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred CeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHh
Confidence 66899999999999999 999999999999999878999999999873
No 174
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.04 E-value=1.3e-09 Score=72.48 Aligned_cols=45 Identities=24% Similarity=0.420 Sum_probs=39.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
.|++|..|.++|||+. | |++||+|++|||+.+.+ +.+...+|...
T Consensus 7 ~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~--~~dl~~~l~~~ 51 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKS--SQEFIDYIHSK 51 (100)
T ss_dssp CCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSS--HHHHHHHHHTS
T ss_pred CCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCC--HHHHHHHHHhC
Confidence 5899999999999995 8 99999999999999964 67888888764
No 175
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.03 E-value=3e-10 Score=74.80 Aligned_cols=42 Identities=26% Similarity=0.414 Sum_probs=40.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|||+|+++|+|+.||+|++|||+++..++|.+++++|+.
T Consensus 34 rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~ 75 (95)
T 3gge_A 34 RIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKE 75 (95)
T ss_dssp EECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHh
Confidence 588999999999999999999999999999999999999974
No 176
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.03 E-value=1.9e-10 Score=79.74 Aligned_cols=50 Identities=24% Similarity=0.399 Sum_probs=46.2
Q ss_pred CCeEEEEecCCCcccccCCc-CCCCEEEEECCeecCCCCHHHHHHHHHcCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARL-KFGDQILELTGEDFRNITHAKAMAHLRLTPA 93 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L-~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~ 93 (175)
.+++|..|.++|||+++| | ++||+|++|||+.+.++++.++..+|+....
T Consensus 33 ~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g 83 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS 83 (127)
T ss_dssp SCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHHHSCCS
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 489999999999999999 7 9999999999999999999999999997543
No 177
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.59 E-value=2.6e-11 Score=82.64 Aligned_cols=50 Identities=30% Similarity=0.527 Sum_probs=46.8
Q ss_pred CeEEEEecCCCcccc-cCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAK-DARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~-~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|..|.++|||++ +| |++||+|++|||+++.+.++.++..++++.+..
T Consensus 54 gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~ 104 (112)
T 2lob_A 54 PILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 104 (112)
Confidence 789999999999999 78 999999999999999999999999999887666
No 178
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=6.4e-10 Score=76.90 Aligned_cols=48 Identities=33% Similarity=0.565 Sum_probs=44.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
.+++|..|.++|||+++|+|++||+|++|||+.+. ++.++..+|+...
T Consensus 48 ~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~~ 95 (124)
T 1wh1_A 48 IGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSEE 95 (124)
T ss_dssp CCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCSS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhCC
Confidence 58999999999999999999999999999999996 5899999998753
No 179
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.01 E-value=2.8e-09 Score=90.38 Aligned_cols=48 Identities=13% Similarity=0.152 Sum_probs=44.0
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
+++|+.|.++++|+..| ++.||.|++|||+.+.+ ..+..++|+++.+.
T Consensus 416 gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s--~~~l~~~l~~~k~~ 463 (539)
T 4fln_A 416 IVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRN--IHHLAHLIDMCKDK 463 (539)
T ss_dssp CEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCS--HHHHHHHHHTCCSS
T ss_pred EEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCC--HHHHHHHHHHcCCC
Confidence 68999999999999999 99999999999999965 58889999988776
No 180
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.99 E-value=3.2e-09 Score=88.10 Aligned_cols=95 Identities=28% Similarity=0.378 Sum_probs=66.4
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC--CCCCCCCCCCCCCCCCCCCCCCcccceee
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT--PAKAKPCPTVPSEPNANATTGEKTTFYFH 120 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (175)
.|++|..|.++|||+++| |++||+|++|||+.+.+ +.+...++... +..
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~--~~~l~~~l~~~~~g~~-------------------------- 313 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRIATTEPGTK-------------------------- 313 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCE--------------------------
Confidence 489999999999999999 99999999999999975 46666666543 334
Q ss_pred eeeeeeecccCCCCCCCCCceEEEEEEeCCC-------CCcCEEEEcCc------CCCceEEEeccC
Q psy1521 121 FQVKLVVLRDTVTKEDDLLEFVDVELTKKAG-------KGFGLSLVGRK------QGPGVFISDLVS 174 (175)
Q Consensus 121 ~~v~l~v~r~~~~~~~~~~~~~~v~l~k~~~-------~~lGfsi~gg~------~~~gi~I~~i~~ 174 (175)
+.|++.|+... ..+++++.+.+. ..+|+...... ...|++|..|.|
T Consensus 314 --v~l~v~R~g~~------~~~~v~l~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~ 372 (436)
T 4a8c_A 314 --VKLGLLRNGKP------LEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVK 372 (436)
T ss_pred --EEEEEEECCEE------EEEEEEECCCCcccccccccccCceeeecccccccCCCCCEEEEEeCC
Confidence 88888887532 234444443221 12555554332 225899998876
No 181
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.97 E-value=7.4e-10 Score=92.40 Aligned_cols=51 Identities=35% Similarity=0.487 Sum_probs=47.6
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc--CCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL--TPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~--~~~~ 94 (175)
.|+||..|.+||||+++| |++||+|++|||+++.+++|++++.+|++ .+..
T Consensus 23 ~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~ 75 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEE 75 (468)
T ss_dssp TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSE
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCE
Confidence 389999999999999999 99999999999999999999999999998 4444
No 182
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.95 E-value=1e-09 Score=89.90 Aligned_cols=51 Identities=35% Similarity=0.487 Sum_probs=47.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc--CCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL--TPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~--~~~~ 94 (175)
.|+||..|.+||||+++| |++||+|++|||.++.++++++++.+|++ .+..
T Consensus 31 ~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~ 83 (391)
T 3tsz_A 31 VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEE 83 (391)
T ss_dssp TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSE
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCe
Confidence 489999999999999999 99999999999999999999999999996 4444
No 183
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.94 E-value=1.1e-09 Score=71.29 Aligned_cols=41 Identities=27% Similarity=0.516 Sum_probs=39.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|+|+++|+|+.||+|++|||.++.+++++++.++++
T Consensus 27 ~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~ 67 (88)
T 3e17_A 27 EMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIE 67 (88)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999999886
No 184
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.92 E-value=1.3e-09 Score=73.52 Aligned_cols=41 Identities=24% Similarity=0.590 Sum_probs=38.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++|+|+.||+|++|||+++.+++|++++.+++
T Consensus 39 ~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 79 (108)
T 3cbz_A 39 SIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLR 79 (108)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHH
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999999885
No 185
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.88 E-value=3.8e-09 Score=69.49 Aligned_cols=45 Identities=24% Similarity=0.432 Sum_probs=39.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
.|++|..|.++|||++ | |++||+|++|||+.+.+ ..+...+++..
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~ 49 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREK 49 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHS
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhC
Confidence 3789999999999999 8 99999999999999965 67888888864
No 186
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.88 E-value=3.3e-09 Score=88.40 Aligned_cols=45 Identities=24% Similarity=0.410 Sum_probs=40.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
.|++|..|.++|||+++| |++||+|++|||+.+.+ +.+...++..
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~--~~~l~~~l~~ 326 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQ--ATQVKTTISL 326 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHT
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCC--HHHHHHHHHh
Confidence 589999999999999999 99999999999999965 5777777764
No 187
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.87 E-value=1.5e-09 Score=73.44 Aligned_cols=42 Identities=36% Similarity=0.578 Sum_probs=39.7
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.++|+|+++|+|+.||+|++|||+++.+++|++++++|+.
T Consensus 47 ~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~ 88 (109)
T 1wi4_A 47 EVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITR 88 (109)
T ss_dssp EECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHH
T ss_pred EeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999999864
No 188
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.87 E-value=1e-08 Score=71.76 Aligned_cols=45 Identities=16% Similarity=0.211 Sum_probs=40.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
.|++|..|.++|||+ +| |++||+|++|||+.+.+ ..+...+++..
T Consensus 57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~--~~~l~~~l~~~ 101 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIAS--STDLQSALYNH 101 (134)
T ss_dssp SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCC--HHHHHHHHHHS
T ss_pred CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCC--HHHHHHHHHhC
Confidence 589999999999999 99 99999999999999965 57777777764
No 189
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=1.1e-09 Score=73.34 Aligned_cols=42 Identities=33% Similarity=0.488 Sum_probs=39.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|++||+++|+|+.||+|++|||.++.+++|++++++|+.
T Consensus 38 ~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 79 (103)
T 1ufx_A 38 TIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAE 79 (103)
T ss_dssp EECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHH
T ss_pred EeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHH
Confidence 578999999999999999999999999999999999999874
No 190
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.85 E-value=1.7e-08 Score=66.54 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=38.7
Q ss_pred EEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 46 LVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 46 ~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
+|..|.++|||+++| |++||+|++|||+.+. +++++...|....
T Consensus 5 ~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~d~~~~l~~~~ 48 (95)
T 3id1_A 5 VVGEIAANSIAAEAQ-IAPGTELKAVDGIETP--DWDAVRLQLVDKI 48 (95)
T ss_dssp BEEEECTTSHHHHTT-CCTTCEEEEETTEECS--SHHHHHHHHHHTT
T ss_pred EEEeeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHHhc
Confidence 688999999999999 9999999999999996 4688888887543
No 191
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.85 E-value=3.6e-09 Score=69.29 Aligned_cols=42 Identities=36% Similarity=0.591 Sum_probs=39.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||+++|+|+.||+|++|||.++.++++.++..+++.
T Consensus 34 ~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 75 (93)
T 3o46_A 34 RIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQ 75 (93)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999999999999999999999999999999863
No 192
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.84 E-value=4e-09 Score=67.80 Aligned_cols=42 Identities=36% Similarity=0.488 Sum_probs=38.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.++.++++.
T Consensus 31 ~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 72 (85)
T 2i04_A 31 SLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQS 72 (85)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999999999999999999999999999888763
No 193
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.84 E-value=4.9e-09 Score=67.10 Aligned_cols=41 Identities=32% Similarity=0.480 Sum_probs=38.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++..+++.
T Consensus 29 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 69 (83)
T 2kv8_A 29 CVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGK 69 (83)
T ss_dssp BCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTT
T ss_pred EeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999 99999999999999999999999988863
No 194
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.84 E-value=6e-09 Score=67.83 Aligned_cols=45 Identities=22% Similarity=0.442 Sum_probs=39.4
Q ss_pred eEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCC
Q psy1521 45 ILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTP 92 (175)
Q Consensus 45 i~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~ 92 (175)
++|..|.++|||+++| |++||+|++|||+.+. ++.++...++...
T Consensus 6 ~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~ 50 (91)
T 2zpm_A 6 PVLENVQPNSAASXAG-LQAGDRIVXVDGQPLT--QWVTFVMLVRDNP 50 (91)
T ss_dssp CBCSEECTTSHHHHTT-CCTTCEEEEETTEECC--CHHHHHHHHHHCT
T ss_pred eEEEEECCCChHHhcC-CCCCCEEEEECCeEcC--CHHHHHHHHhcCC
Confidence 4688999999999999 9999999999999996 4688888887653
No 195
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.83 E-value=2.6e-09 Score=73.32 Aligned_cols=42 Identities=33% Similarity=0.721 Sum_probs=39.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|+|+++|+|+.||+|++|||.++.++++.+++.+++.
T Consensus 59 ~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 100 (118)
T 3b76_A 59 SVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKR 100 (118)
T ss_dssp EECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHS
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999999875
No 196
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.83 E-value=3.6e-09 Score=71.26 Aligned_cols=42 Identities=33% Similarity=0.521 Sum_probs=39.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||+++|+|++||+|++|||.++.++++.+++.+++.
T Consensus 50 ~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2d92_A 50 SLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKA 91 (108)
T ss_dssp EECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHH
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999999999999999999999999999999864
No 197
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.83 E-value=4.7e-09 Score=68.20 Aligned_cols=41 Identities=51% Similarity=0.735 Sum_probs=38.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|++||+|++|||.++.+.++.++..+++
T Consensus 33 ~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 73 (90)
T 2q9v_A 33 HIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQ 73 (90)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999888875
No 198
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.83 E-value=5.3e-09 Score=69.82 Aligned_cols=41 Identities=37% Similarity=0.564 Sum_probs=38.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.++..+++
T Consensus 40 ~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~ 80 (103)
T 1uep_A 40 AVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMH 80 (103)
T ss_dssp EECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred EeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999988875
No 199
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=3.3e-09 Score=68.89 Aligned_cols=42 Identities=26% Similarity=0.588 Sum_probs=38.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||++++.|++||+|++|||.++.+++++++.++++.
T Consensus 31 ~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 72 (88)
T 1kwa_A 31 RIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLRE 72 (88)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 578999999955599999999999999999999999999864
No 200
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.82 E-value=2.5e-09 Score=74.28 Aligned_cols=41 Identities=34% Similarity=0.572 Sum_probs=39.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++|+|+.||+|++|||+++.+++|.+++.+|+
T Consensus 61 ~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 101 (127)
T 1wg6_A 61 SIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLR 101 (127)
T ss_dssp ECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHH
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 58899999999999999999999999999999999999987
No 201
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.81 E-value=3.1e-09 Score=70.44 Aligned_cols=41 Identities=34% Similarity=0.669 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++|+|++||+|++|||.++.+++++++.++++
T Consensus 42 ~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~ 82 (97)
T 2ejy_A 42 RILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMK 82 (97)
T ss_dssp EECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHH
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999988899988886
No 202
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.81 E-value=4.6e-09 Score=68.88 Aligned_cols=41 Identities=24% Similarity=0.473 Sum_probs=38.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |+.||+|++|||.++.+++|.++..+++.
T Consensus 35 ~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 75 (95)
T 3r68_A 35 DIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRK 75 (95)
T ss_dssp CCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999 99999999999999999999999998874
No 203
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.81 E-value=5.7e-09 Score=70.02 Aligned_cols=42 Identities=31% Similarity=0.571 Sum_probs=39.0
Q ss_pred ccCCCChhhhcC-CCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDG-RLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G-~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| ||+.||+|++|||.++.++++.++..+++.
T Consensus 49 ~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~ 91 (107)
T 3nfk_A 49 RVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKA 91 (107)
T ss_dssp EECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHC
T ss_pred EECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999 799999999999999999999999988864
No 204
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.81 E-value=4e-09 Score=72.26 Aligned_cols=41 Identities=32% Similarity=0.565 Sum_probs=37.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.++|||+++|+|+.||+|++|||.++.+++|++++++++
T Consensus 49 ~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~ 89 (118)
T 1v6b_A 49 AVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQ 89 (118)
T ss_dssp ECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999559999999999999999999999988875
No 205
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.80 E-value=5.7e-09 Score=70.11 Aligned_cols=42 Identities=31% Similarity=0.631 Sum_probs=39.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||+++|+|+.||+|++|||.++.++++.+++.+++.
T Consensus 38 ~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 79 (106)
T 4amh_A 38 KIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKN 79 (106)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHS
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 578999999999999999999999999999999999988864
No 206
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.80 E-value=5.7e-09 Score=72.83 Aligned_cols=41 Identities=29% Similarity=0.462 Sum_probs=38.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++|+|++||+|++|||+++.+++|+++..+++
T Consensus 71 ~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~ 111 (131)
T 1wfg_A 71 KVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIIL 111 (131)
T ss_dssp EECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999999885
No 207
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=5.4e-09 Score=71.43 Aligned_cols=42 Identities=33% Similarity=0.654 Sum_probs=39.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||+++|+|++||+|++|||.++.++++.+++.+++.
T Consensus 55 ~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~ 96 (117)
T 1ujd_A 55 KILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQ 96 (117)
T ss_dssp EECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Confidence 578999999999999999999999999999999999999864
No 208
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.80 E-value=1.7e-09 Score=81.82 Aligned_cols=50 Identities=20% Similarity=0.413 Sum_probs=46.7
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
|++|..|.++|||+++| |++||+|++|||+.+.++++.++..+|+..+..
T Consensus 34 gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~ 83 (216)
T 2krg_A 34 GQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (216)
T ss_dssp SCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCSE
T ss_pred CeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCe
Confidence 78999999999999999 999999999999999988999999999876554
No 209
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.79 E-value=9.9e-09 Score=66.44 Aligned_cols=45 Identities=18% Similarity=0.085 Sum_probs=37.9
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
|+.|..+.++|+|+++| |++||+|++|||+.+.+ +.+...+++..
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~--~~d~~~~~~~~ 64 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD--PNVMNTLFQSM 64 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTC--HHHHHHHHHTG
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHHhc
Confidence 56778888888889999 99999999999999964 67777777653
No 210
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.79 E-value=6e-09 Score=71.63 Aligned_cols=41 Identities=27% Similarity=0.494 Sum_probs=38.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++|+|+.||+|++|||.++.++++.+++.+++
T Consensus 59 ~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~ 99 (120)
T 2iwo_A 59 MMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLK 99 (120)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999559999999999999999999999999886
No 211
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=7.4e-09 Score=67.52 Aligned_cols=41 Identities=22% Similarity=0.291 Sum_probs=38.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++..+++.
T Consensus 30 ~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 70 (91)
T 2f5y_A 30 AVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRS 70 (91)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999 99999999999999999999999988864
No 212
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.78 E-value=8e-09 Score=67.22 Aligned_cols=41 Identities=29% Similarity=0.618 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++..+++.
T Consensus 33 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 73 (91)
T 1g9o_A 33 LVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRA 73 (91)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999 99999999999999999999999999874
No 213
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.78 E-value=8.5e-09 Score=67.77 Aligned_cols=42 Identities=26% Similarity=0.670 Sum_probs=39.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.++|||+++|+|+.||+|++|||.++.++++.++..+++.
T Consensus 39 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 80 (96)
T 1d5g_A 39 AVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN 80 (96)
T ss_dssp EECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS
T ss_pred EeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999988863
No 214
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.78 E-value=8.4e-09 Score=66.69 Aligned_cols=40 Identities=28% Similarity=0.429 Sum_probs=37.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++..+++
T Consensus 33 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~ 72 (88)
T 2uzc_A 33 SLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIK 72 (88)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999988876
No 215
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=7.9e-09 Score=70.69 Aligned_cols=42 Identities=33% Similarity=0.648 Sum_probs=39.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.++|||+++|+|+.||+|++|||.++.++++.+++.+++.
T Consensus 60 ~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 101 (117)
T 2byg_A 60 KIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN 101 (117)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999999874
No 216
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.78 E-value=2.4e-09 Score=74.63 Aligned_cols=42 Identities=24% Similarity=0.411 Sum_probs=39.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|+|+++|+|+.||+|++|||+++.+++|++++.+++.
T Consensus 63 ~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 104 (130)
T 1i16_A 63 RIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKA 104 (130)
T ss_dssp EECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHT
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999996699999999999999999999999999975
No 217
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.78 E-value=6.5e-09 Score=69.93 Aligned_cols=42 Identities=21% Similarity=0.404 Sum_probs=39.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||+++|+|++||+|++|||.++.+.++.++..+++.
T Consensus 31 ~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~ 72 (106)
T 2la8_A 31 DLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG 72 (106)
T ss_dssp ECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 578999999999999999999999999999999998888764
No 218
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.77 E-value=8.4e-09 Score=67.02 Aligned_cols=41 Identities=32% Similarity=0.506 Sum_probs=38.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |++||+|++|||.++.+++|.++..+++.
T Consensus 34 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2he4_A 34 SVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKA 74 (90)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTT
T ss_pred EECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999 99999999999999999999999998874
No 219
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=8.3e-09 Score=67.37 Aligned_cols=40 Identities=28% Similarity=0.570 Sum_probs=37.7
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++| |+.||+|++|||.++.+.++.++..+++
T Consensus 37 ~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~ 76 (90)
T 1y7n_A 37 SLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILS 76 (90)
T ss_dssp EECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999998885
No 220
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.77 E-value=1e-08 Score=66.76 Aligned_cols=41 Identities=32% Similarity=0.468 Sum_probs=38.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++..+++.
T Consensus 33 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 73 (91)
T 2vsp_A 33 EVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQS 73 (91)
T ss_dssp CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTT
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999 99999999999999999999999998874
No 221
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.77 E-value=9.5e-09 Score=67.44 Aligned_cols=41 Identities=34% Similarity=0.665 Sum_probs=38.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++|+|++||+|++|||.++.++++.++...++
T Consensus 35 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 75 (95)
T 2vwr_A 35 DLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQ 75 (95)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999998888775
No 222
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.77 E-value=9.5e-09 Score=66.99 Aligned_cols=41 Identities=56% Similarity=0.934 Sum_probs=38.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.++..+++
T Consensus 35 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 75 (92)
T 2qg1_A 35 DIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLK 75 (92)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999888875
No 223
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.77 E-value=9.9e-09 Score=66.26 Aligned_cols=41 Identities=20% Similarity=0.349 Sum_probs=38.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++.++++.
T Consensus 32 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 72 (87)
T 2pa1_A 32 KVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQ 72 (87)
T ss_dssp EECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHT
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999 99999999999999999999999998875
No 224
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.77 E-value=9.6e-09 Score=67.72 Aligned_cols=41 Identities=22% Similarity=0.537 Sum_probs=38.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.++..+++
T Consensus 36 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 76 (97)
T 1n7e_A 36 SLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ 76 (97)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999998886
No 225
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.76 E-value=8.2e-09 Score=66.27 Aligned_cols=40 Identities=30% Similarity=0.517 Sum_probs=37.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++| |++||+|++|||.++.++++.++...++
T Consensus 31 ~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 70 (85)
T 1rgw_A 31 RITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIK 70 (85)
T ss_dssp EECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHT
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHH
Confidence 578999999999 9999999999999999999999998876
No 226
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.76 E-value=9.1e-09 Score=71.04 Aligned_cols=42 Identities=31% Similarity=0.534 Sum_probs=39.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|||||+++|+|+.||+|++|||.++.++++.++..+++.
T Consensus 51 ~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 92 (125)
T 3hpk_A 51 QVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQE 92 (125)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999998873
No 227
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.76 E-value=1.2e-08 Score=67.23 Aligned_cols=42 Identities=21% Similarity=0.397 Sum_probs=38.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||+++|+|+.||+|++|||.++.++++.++..+++.
T Consensus 37 ~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~ 78 (96)
T 2qkv_A 37 DLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKG 78 (96)
T ss_dssp EECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 578999999999999999999999999999999988888764
No 228
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.76 E-value=2.5e-08 Score=66.49 Aligned_cols=41 Identities=20% Similarity=0.385 Sum_probs=38.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.+++.+++
T Consensus 44 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 84 (104)
T 2djt_A 44 GLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIR 84 (104)
T ss_dssp EECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999988876
No 229
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.76 E-value=1e-08 Score=67.50 Aligned_cols=41 Identities=34% Similarity=0.639 Sum_probs=38.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.++..+++
T Consensus 38 ~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 78 (97)
T 2jil_A 38 SVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILK 78 (97)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999998886
No 230
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.76 E-value=7.3e-09 Score=68.18 Aligned_cols=42 Identities=17% Similarity=0.341 Sum_probs=38.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKGG 44 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~g 44 (175)
.|.|+|||+++| |+.||+|++|||.++.+++++++..+++..
T Consensus 41 ~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~~ 82 (94)
T 3kzd_A 41 SVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQP 82 (94)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHSS
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC
Confidence 578999999999 999999999999999999999999988753
No 231
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.76 E-value=7.5e-09 Score=67.12 Aligned_cols=40 Identities=33% Similarity=0.584 Sum_probs=37.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++..+++
T Consensus 33 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~ 72 (89)
T 2q3g_A 33 RLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIR 72 (89)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999988876
No 232
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.76 E-value=1.1e-08 Score=66.59 Aligned_cols=41 Identities=34% Similarity=0.541 Sum_probs=38.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++..+++.
T Consensus 33 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 73 (91)
T 2pkt_A 33 RVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKG 73 (91)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999 99999999999999999999999888864
No 233
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.75 E-value=1.1e-08 Score=67.46 Aligned_cols=42 Identities=36% Similarity=0.684 Sum_probs=38.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.++...++.
T Consensus 36 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 77 (98)
T 2opg_A 36 EVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQ 77 (98)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999999999999999999999999999888863
No 234
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.75 E-value=1.1e-08 Score=67.35 Aligned_cols=40 Identities=35% Similarity=0.496 Sum_probs=37.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.+++++++..+++
T Consensus 43 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~ 82 (96)
T 2ego_A 43 RVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIK 82 (96)
T ss_dssp EECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999988875
No 235
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=1e-08 Score=70.10 Aligned_cols=41 Identities=39% Similarity=0.688 Sum_probs=38.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++|+|++||+|++|||.++.++++.+++.+++
T Consensus 59 ~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 99 (117)
T 2fne_A 59 TVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILK 99 (117)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999998886
No 236
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.75 E-value=9.3e-09 Score=66.34 Aligned_cols=40 Identities=38% Similarity=0.620 Sum_probs=36.9
Q ss_pred ccCCCChhhhc-CCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATD-GRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~-G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++ | |+.||+|++|||.++.++++.++..+++
T Consensus 34 ~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 74 (87)
T 4e34_A 34 EIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILS 74 (87)
T ss_dssp EECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999995 6 9999999999999999999999998876
No 237
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=1.2e-08 Score=67.67 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=37.7
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++..+++
T Consensus 42 ~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~ 81 (100)
T 1whd_A 42 AVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIR 81 (100)
T ss_dssp BCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 678999999999 9999999999999999999999998886
No 238
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.75 E-value=1e-08 Score=67.03 Aligned_cols=42 Identities=36% Similarity=0.680 Sum_probs=38.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.++..+++.
T Consensus 39 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (94)
T 2fe5_A 39 KIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN 80 (94)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999888763
No 239
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=1.4e-08 Score=67.57 Aligned_cols=41 Identities=32% Similarity=0.592 Sum_probs=38.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.++..+++
T Consensus 42 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 82 (103)
T 1wfv_A 42 RLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIK 82 (103)
T ss_dssp CBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 67899999999999999999999999999999999988875
No 240
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.75 E-value=1.2e-08 Score=67.76 Aligned_cols=41 Identities=37% Similarity=0.692 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|+|+++|+|+.||+|++|||.++.++++.++..+++
T Consensus 43 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (101)
T 2jik_A 43 RIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 83 (101)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999988886
No 241
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.75 E-value=1.2e-08 Score=69.10 Aligned_cols=40 Identities=28% Similarity=0.273 Sum_probs=37.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |+.||+|++|||.++.+|++.++.++++
T Consensus 50 ~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~ 89 (109)
T 2vsv_A 50 FLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLK 89 (109)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999998886
No 242
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=9.3e-09 Score=70.28 Aligned_cols=42 Identities=31% Similarity=0.538 Sum_probs=39.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|+|+++|+|++||+|++|||.++.+++++++..+++.
T Consensus 48 ~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 89 (117)
T 1v62_A 48 RIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS 89 (117)
T ss_dssp ECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999999999999999999999999999999863
No 243
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.73 E-value=1.5e-08 Score=66.35 Aligned_cols=41 Identities=20% Similarity=0.374 Sum_probs=38.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++..+++.
T Consensus 36 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 76 (94)
T 1vb7_A 36 KVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQ 76 (94)
T ss_dssp CBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 588999999999 99999999999999999999999988874
No 244
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.73 E-value=1.3e-08 Score=67.59 Aligned_cols=42 Identities=33% Similarity=0.560 Sum_probs=38.7
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.++..+++.
T Consensus 40 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 81 (102)
T 2i1n_A 40 KIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE 81 (102)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999998888763
No 245
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.73 E-value=1.2e-08 Score=70.96 Aligned_cols=42 Identities=36% Similarity=0.488 Sum_probs=39.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.++|+|+++|+|+.||+|++|||.++.+++|.++..+++.
T Consensus 49 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~ 90 (129)
T 2kpk_A 49 SLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQS 90 (129)
T ss_dssp EECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999999999999999999999999999988863
No 246
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.73 E-value=1e-08 Score=68.45 Aligned_cols=42 Identities=36% Similarity=0.574 Sum_probs=37.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||++++.|+.||+|++|||.++.++++.+++.+++.
T Consensus 41 ~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 82 (103)
T 2dc2_A 41 EIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ 82 (103)
T ss_dssp EECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHH
T ss_pred EECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999973399999999999999999999999999863
No 247
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.73 E-value=1.7e-08 Score=66.11 Aligned_cols=40 Identities=28% Similarity=0.351 Sum_probs=37.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++..+++
T Consensus 38 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~ 77 (94)
T 2eeg_A 38 RVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIK 77 (94)
T ss_dssp CCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999998888776
No 248
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.73 E-value=1.5e-08 Score=67.75 Aligned_cols=40 Identities=25% Similarity=0.508 Sum_probs=37.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++..+++
T Consensus 32 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 71 (106)
T 3ngh_A 32 VIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVR 71 (106)
T ss_dssp CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred EeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999888875
No 249
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.73 E-value=1.3e-08 Score=68.76 Aligned_cols=41 Identities=44% Similarity=0.796 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.++..+++
T Consensus 45 ~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 85 (111)
T 2koj_A 45 NILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLR 85 (111)
T ss_dssp EECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999998886
No 250
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.73 E-value=1.6e-08 Score=68.83 Aligned_cols=42 Identities=45% Similarity=0.716 Sum_probs=39.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.++..+++.
T Consensus 49 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 90 (116)
T 2dm8_A 49 EVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQ 90 (116)
T ss_dssp CCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHT
T ss_pred EECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 588999999999999999999999999999999999988873
No 251
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.73 E-value=1.4e-08 Score=67.95 Aligned_cols=42 Identities=48% Similarity=0.696 Sum_probs=39.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.++..+++.
T Consensus 44 ~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 85 (106)
T 3axa_A 44 SVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR 85 (106)
T ss_dssp EEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999988853
No 252
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.73 E-value=1.1e-08 Score=69.27 Aligned_cols=41 Identities=32% Similarity=0.536 Sum_probs=38.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++|+|+.||+|++|||.++.++++.++..+++
T Consensus 41 ~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (113)
T 2g5m_B 41 TVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 81 (113)
T ss_dssp ECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 57899999999999999999999999999999999888875
No 253
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.73 E-value=1.3e-08 Score=68.03 Aligned_cols=42 Identities=31% Similarity=0.638 Sum_probs=39.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||+++|+|+.||+|++|||.++.+.++.+++..++.
T Consensus 39 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (105)
T 2awx_A 39 KIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN 80 (105)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999888863
No 254
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.72 E-value=1.5e-08 Score=66.78 Aligned_cols=41 Identities=39% Similarity=0.645 Sum_probs=38.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.++..+++
T Consensus 43 ~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 43 GIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp EECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 57899999999999999999999999999999998888875
No 255
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1e-08 Score=68.88 Aligned_cols=41 Identities=37% Similarity=0.574 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.++..+++
T Consensus 46 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 86 (107)
T 1wf8_A 46 TVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLR 86 (107)
T ss_dssp EECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHH
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 57899999999999999999999999999999999988875
No 256
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.72 E-value=1.5e-08 Score=65.87 Aligned_cols=40 Identities=23% Similarity=0.296 Sum_probs=36.7
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++..+++
T Consensus 38 ~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 77 (91)
T 1m5z_A 38 NIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIA 77 (91)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999988877765
No 257
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.72 E-value=1.5e-08 Score=67.67 Aligned_cols=41 Identities=29% Similarity=0.561 Sum_probs=38.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |+.||+|++|||.++.+++++++.++++.
T Consensus 47 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 87 (104)
T 1wi2_A 47 KVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT 87 (104)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 578999999999 99999999999999999999999998874
No 258
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1.6e-08 Score=67.30 Aligned_cols=42 Identities=33% Similarity=0.581 Sum_probs=39.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.++..+++.
T Consensus 45 ~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 86 (103)
T 2fcf_A 45 HVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRK 86 (103)
T ss_dssp EECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999999999999999999999999999998864
No 259
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.72 E-value=1.6e-08 Score=68.09 Aligned_cols=40 Identities=28% Similarity=0.520 Sum_probs=37.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++|+|+++| |+.||+|++|||.++.+++|.++..+++
T Consensus 51 ~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 90 (109)
T 1q3o_A 51 SVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIR 90 (109)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 478999999999 9999999999999999999999998876
No 260
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.72 E-value=1.2e-08 Score=70.69 Aligned_cols=42 Identities=29% Similarity=0.438 Sum_probs=39.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|+.||+|++|||.++.+.++.++..+++.
T Consensus 55 ~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~ 96 (126)
T 1wif_A 55 HLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQN 96 (126)
T ss_dssp CCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTS
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Confidence 688999999999999999999999999999999999999874
No 261
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.72 E-value=1.4e-08 Score=70.86 Aligned_cols=40 Identities=28% Similarity=0.520 Sum_probs=37.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|+|+++| |+.||+|++|||.++.++++.+++.+++
T Consensus 71 ~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 110 (132)
T 3l4f_D 71 SVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIR 110 (132)
T ss_dssp EECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999998886
No 262
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.71 E-value=2.9e-08 Score=79.94 Aligned_cols=46 Identities=28% Similarity=0.483 Sum_probs=41.3
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLT 91 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~ 91 (175)
.|++|..|.++|||+++| |++||+|++|||+.+. +..+...+++..
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~--~~~~l~~~l~~~ 308 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATT 308 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECS--CHHHHHHHHHTS
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhc
Confidence 488999999999999999 9999999999999996 467888888763
No 263
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.71 E-value=1.4e-08 Score=67.87 Aligned_cols=42 Identities=29% Similarity=0.628 Sum_probs=39.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.+++.+++.
T Consensus 44 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 85 (105)
T 1wha_A 44 RIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTA 85 (105)
T ss_dssp ECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTS
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999999874
No 264
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.71 E-value=2.1e-08 Score=68.34 Aligned_cols=41 Identities=27% Similarity=0.558 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCC-CCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVR-DKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~-~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|+.||+|++|||.++. ++++.++..+++
T Consensus 55 ~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~ 96 (117)
T 2o2t_A 55 EIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQ 96 (117)
T ss_dssp CCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHH
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 68899999999999999999999999998 999999998876
No 265
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.71 E-value=1.7e-08 Score=66.56 Aligned_cols=41 Identities=24% Similarity=0.428 Sum_probs=38.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++..+++.
T Consensus 39 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 79 (98)
T 2jxo_A 39 SVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRA 79 (98)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999 99999999999999999999999988864
No 266
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.71 E-value=1.3e-08 Score=68.37 Aligned_cols=41 Identities=34% Similarity=0.653 Sum_probs=38.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.++..+++
T Consensus 50 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 90 (108)
T 2jre_A 50 SLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLR 90 (108)
T ss_dssp EECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHH
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999988876
No 267
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.71 E-value=1.3e-08 Score=70.52 Aligned_cols=41 Identities=27% Similarity=0.539 Sum_probs=38.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCC-CCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVR-DKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~-~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|+.||+|++|||.++. ++++.+++.+++
T Consensus 60 ~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~ 101 (128)
T 2db5_A 60 DVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQ 101 (128)
T ss_dssp CCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 57899999999999999999999999997 999999999886
No 268
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.71 E-value=1.7e-08 Score=67.06 Aligned_cols=41 Identities=22% Similarity=0.411 Sum_probs=37.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++|.|+.||+|++|||.++.+.+++++.++++
T Consensus 43 ~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~ 83 (101)
T 2yt7_A 43 NLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVR 83 (101)
T ss_dssp EECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999997779999999999999999999999999886
No 269
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.71 E-value=1.8e-08 Score=69.43 Aligned_cols=42 Identities=26% Similarity=0.521 Sum_probs=39.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.++|+|+++|+|+.||+|++|||+++.++++.++..+++.
T Consensus 50 ~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 91 (123)
T 1ueq_A 50 SVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQS 91 (123)
T ss_dssp EECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999999999999999999999999999998875
No 270
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.71 E-value=4.7e-08 Score=79.88 Aligned_cols=51 Identities=20% Similarity=0.289 Sum_probs=45.9
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
++++|..|.++|||+++| |++||+|++|||+++.+++.+++..+|+.....
T Consensus 99 ~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~ 149 (388)
T 1fc6_A 99 KDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADS 149 (388)
T ss_dssp SCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTC
T ss_pred CcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCC
Confidence 478999999999999999 999999999999999999889999999865444
No 271
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.71 E-value=4.3e-08 Score=64.11 Aligned_cols=42 Identities=40% Similarity=0.689 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKGG 44 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~g 44 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.+++..++.+
T Consensus 35 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~g 76 (93)
T 2dls_A 35 SVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKSG 76 (93)
T ss_dssp EECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHTSS
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcCC
Confidence 578999999999 999999999999999999999888888754
No 272
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.70 E-value=1.6e-08 Score=65.99 Aligned_cols=41 Identities=39% Similarity=0.805 Sum_probs=37.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|.|+.||+|++|||.++.++++.++..+++
T Consensus 36 ~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~ 76 (93)
T 2dkr_A 36 RVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLK 76 (93)
T ss_dssp EECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999669999999999999999999999998876
No 273
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.70 E-value=1.6e-08 Score=66.43 Aligned_cols=41 Identities=29% Similarity=0.511 Sum_probs=38.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++..+++.
T Consensus 36 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 76 (96)
T 2v90_A 36 EVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQG 76 (96)
T ss_dssp EECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999 99999999999999999999999988864
No 274
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.70 E-value=1.5e-08 Score=68.47 Aligned_cols=41 Identities=44% Similarity=0.856 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++|+|+++|+|+.||+|++|||+++.++++.++..+++
T Consensus 44 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 84 (111)
T 2dlu_A 44 TIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLR 84 (111)
T ss_dssp EECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999988876
No 275
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.70 E-value=2e-08 Score=66.39 Aligned_cols=40 Identities=25% Similarity=0.366 Sum_probs=37.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++..+++
T Consensus 40 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 79 (99)
T 3khf_A 40 SVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLL 79 (99)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 578999999999 9999999999999999999999988886
No 276
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=2e-08 Score=65.53 Aligned_cols=41 Identities=29% Similarity=0.543 Sum_probs=37.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||+++|.|+.||+|++|||.++ +.+++++.++++.
T Consensus 35 ~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~ 75 (91)
T 2e7k_A 35 RILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRN 75 (91)
T ss_dssp EECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHT
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHc
Confidence 5789999999988999999999999999 8899999999874
No 277
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.70 E-value=1.8e-08 Score=65.47 Aligned_cols=42 Identities=29% Similarity=0.475 Sum_probs=38.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|.|++||+|++|||.++.++++.++..+++.
T Consensus 36 ~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~ 77 (90)
T 1qav_A 36 KIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKK 77 (90)
T ss_dssp EECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999994499999999999999999999999988864
No 278
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.69 E-value=1.7e-08 Score=68.85 Aligned_cols=42 Identities=26% Similarity=0.464 Sum_probs=39.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.++|||+++|+|+.||+|++|||.++.++++.+++.+++.
T Consensus 56 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 97 (117)
T 2ehr_A 56 QVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKN 97 (117)
T ss_dssp EECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHT
T ss_pred EeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999988864
No 279
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.69 E-value=1.7e-08 Score=67.22 Aligned_cols=42 Identities=45% Similarity=0.686 Sum_probs=38.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.++...++.
T Consensus 41 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (104)
T 3i4w_A 41 FILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN 82 (104)
T ss_dssp EECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999998887764
No 280
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.69 E-value=2.1e-08 Score=68.69 Aligned_cols=41 Identities=37% Similarity=0.692 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++|||+++|+|+.||+|++|||.++.++++.+++.+++
T Consensus 53 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 93 (120)
T 2eno_A 53 RIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 93 (120)
T ss_dssp EECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHH
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999988876
No 281
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.69 E-value=2e-08 Score=69.25 Aligned_cols=41 Identities=34% Similarity=0.604 Sum_probs=38.7
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|++||+|++|||.++.+++++++..+++
T Consensus 65 ~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 105 (123)
T 2iwq_A 65 HVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIR 105 (123)
T ss_dssp EECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999998886
No 282
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.69 E-value=9e-09 Score=70.42 Aligned_cols=41 Identities=24% Similarity=0.731 Sum_probs=38.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.+++.+++
T Consensus 48 ~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~ 88 (119)
T 1x6d_A 48 RVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILR 88 (119)
T ss_dssp EECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHH
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999998875
No 283
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.69 E-value=2.1e-08 Score=67.20 Aligned_cols=41 Identities=32% Similarity=0.712 Sum_probs=38.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++..+++.
T Consensus 49 ~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 89 (107)
T 3qe1_A 49 AVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQVVDLIRA 89 (107)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 478999999999 99999999999999999999999988763
No 284
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.68 E-value=2.3e-08 Score=66.63 Aligned_cols=40 Identities=25% Similarity=0.390 Sum_probs=37.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++| |+.||+|++|||.++.++++.++..+++
T Consensus 35 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 74 (103)
T 1wf7_A 35 SLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIK 74 (103)
T ss_dssp CCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 678999999999 9999999999999999999988887765
No 285
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=5e-08 Score=65.39 Aligned_cols=41 Identities=29% Similarity=0.511 Sum_probs=37.7
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+++|.|+.||+|++|||.++.++++.+++.+++
T Consensus 47 ~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~ 87 (107)
T 1uhp_A 47 KIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFK 87 (107)
T ss_dssp EECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999449999999999999999999999998886
No 286
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.68 E-value=2.6e-08 Score=67.49 Aligned_cols=41 Identities=22% Similarity=0.510 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++|||+++|+|+.||+|++|||.++.++++.++..+++
T Consensus 55 ~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 95 (112)
T 2r4h_A 55 RLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIK 95 (112)
T ss_dssp EECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999988876
No 287
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.68 E-value=2.3e-08 Score=66.60 Aligned_cols=40 Identities=33% Similarity=0.508 Sum_probs=37.7
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.+++++++...++
T Consensus 51 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 90 (104)
T 3sfj_A 51 RVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLT 90 (104)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHT
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999999886
No 288
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.67 E-value=2.5e-08 Score=69.16 Aligned_cols=41 Identities=39% Similarity=0.708 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++|||+++|+|+.||+|++|||.++.++++.++..+++
T Consensus 71 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~ 111 (128)
T 1nf3_C 71 RLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMI 111 (128)
T ss_dssp EECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHH
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999989999999999999999999999998885
No 289
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.67 E-value=1e-07 Score=75.81 Aligned_cols=44 Identities=23% Similarity=0.464 Sum_probs=40.2
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
+++|..|.++|||+++| |++||+|++|||+.+.+ ..+...+|+.
T Consensus 245 g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~ 288 (318)
T 1te0_A 245 GIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAE 288 (318)
T ss_dssp CEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHT
T ss_pred cEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHh
Confidence 78999999999999999 99999999999999965 6788888875
No 290
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.67 E-value=2.5e-08 Score=68.57 Aligned_cols=41 Identities=44% Similarity=0.784 Sum_probs=38.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|++||+|++|||+++.+++++++.++++
T Consensus 64 ~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~ 104 (121)
T 2kom_A 64 NILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLR 104 (121)
T ss_dssp EECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHH
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Confidence 57899999999999999999999999999999999988876
No 291
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=2.5e-08 Score=66.72 Aligned_cols=40 Identities=38% Similarity=0.659 Sum_probs=37.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++...++
T Consensus 38 ~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 77 (106)
T 2eei_A 38 DITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVK 77 (106)
T ss_dssp CCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999888775
No 292
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=2.5e-08 Score=67.23 Aligned_cols=42 Identities=31% Similarity=0.543 Sum_probs=39.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.+++.+++.
T Consensus 42 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 83 (110)
T 1um1_A 42 TLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRH 83 (110)
T ss_dssp EECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHT
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999888764
No 293
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.66 E-value=3.3e-08 Score=65.91 Aligned_cols=41 Identities=29% Similarity=0.508 Sum_probs=38.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++..+++.
T Consensus 35 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 75 (103)
T 1v5l_A 35 RITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKA 75 (103)
T ss_dssp CBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTT
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 688999999999 99999999999999999999999998874
No 294
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.66 E-value=1.9e-08 Score=69.35 Aligned_cols=41 Identities=29% Similarity=0.551 Sum_probs=38.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|++||+|++|||.++.++++.+++.+++
T Consensus 57 ~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~ 97 (124)
T 2daz_A 57 GINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIK 97 (124)
T ss_dssp EECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999988875
No 295
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.65 E-value=2.1e-07 Score=64.34 Aligned_cols=44 Identities=25% Similarity=0.298 Sum_probs=39.2
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
.+++|..|.+++||+++ |++||+|++|||+.+.+ +.+....++.
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~ 68 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSN--LTTYSAALKT 68 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTT
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHh
Confidence 48999999999999998 99999999999999964 6788877874
No 296
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.65 E-value=2.5e-08 Score=68.20 Aligned_cols=42 Identities=31% Similarity=0.585 Sum_probs=37.9
Q ss_pred ccCCCChhhhc-CCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATD-GRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~-G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||+++ |+|+.||+|++|||.++.+++|.+++.+++.
T Consensus 47 ~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~ 89 (119)
T 2cs5_A 47 RVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKA 89 (119)
T ss_dssp EECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHH
T ss_pred EECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 57899999999 3499999999999999999999999988763
No 297
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.65 E-value=3.3e-08 Score=65.71 Aligned_cols=40 Identities=25% Similarity=0.494 Sum_probs=37.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++..+++
T Consensus 36 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 75 (102)
T 2d90_A 36 DIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIR 75 (102)
T ss_dssp CCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999888875
No 298
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.65 E-value=3.6e-08 Score=64.62 Aligned_cols=41 Identities=27% Similarity=0.559 Sum_probs=38.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++|||+++|+|++||+|++|||.++.++++.++..+++
T Consensus 39 ~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (97)
T 2iwn_A 39 SITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLR 79 (97)
T ss_dssp EECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred EeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 47899999999999999999999999999999999888876
No 299
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.64 E-value=3.3e-08 Score=67.07 Aligned_cols=40 Identities=25% Similarity=0.508 Sum_probs=37.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++...++
T Consensus 44 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (114)
T 2edz_A 44 VIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVR 83 (114)
T ss_dssp CCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHH
T ss_pred EeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999988875
No 300
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.64 E-value=4.2e-08 Score=62.09 Aligned_cols=41 Identities=24% Similarity=0.494 Sum_probs=38.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|+|+++|+|++||+|++|||.++.++++.++..+++
T Consensus 27 ~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 67 (81)
T 2rcz_A 27 EISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIE 67 (81)
T ss_dssp EECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999988876
No 301
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.64 E-value=3.1e-08 Score=65.81 Aligned_cols=40 Identities=28% Similarity=0.368 Sum_probs=35.7
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|||||+++| |++||+|++|||.++...+.+++...++
T Consensus 45 ~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~ 84 (101)
T 3qik_A 45 SVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILN 84 (101)
T ss_dssp EECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHH
Confidence 578999999999 9999999999999998777888877764
No 302
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=1.9e-08 Score=67.55 Aligned_cols=41 Identities=27% Similarity=0.683 Sum_probs=37.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++|||+++|+|+.||+|++|||.++.++++.++..+++
T Consensus 48 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 88 (108)
T 1q7x_A 48 AVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLR 88 (108)
T ss_dssp EECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHH
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999888888775
No 303
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.63 E-value=4.6e-08 Score=63.56 Aligned_cols=42 Identities=24% Similarity=0.475 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.++|+|+++|+|+.||+|++|||.++.++++.++..+++.
T Consensus 29 ~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 70 (92)
T 3cyy_A 29 EISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIER 70 (92)
T ss_dssp EECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999888863
No 304
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.63 E-value=3e-08 Score=68.51 Aligned_cols=40 Identities=30% Similarity=0.449 Sum_probs=37.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++...+.
T Consensus 57 ~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 96 (124)
T 3tsv_A 57 GVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLL 96 (124)
T ss_dssp EECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999998888765
No 305
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.63 E-value=3.8e-08 Score=66.77 Aligned_cols=41 Identities=34% Similarity=0.686 Sum_probs=37.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++|||+++|.|+.||+|++|||.++.+++++++..+++
T Consensus 54 ~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~ 94 (113)
T 1va8_A 54 RIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLS 94 (113)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999933999999999999999999999999885
No 306
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.63 E-value=3.8e-08 Score=65.20 Aligned_cols=42 Identities=21% Similarity=0.418 Sum_probs=38.6
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKGG 44 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~g 44 (175)
.|.|+|||+++| |++||+|++|||.++.++++.+++..++.+
T Consensus 42 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 83 (100)
T 2eeh_A 42 KVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTSS 83 (100)
T ss_dssp EECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHSC
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcCC
Confidence 578999999999 999999999999999999999999888753
No 307
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.63 E-value=8.3e-08 Score=64.24 Aligned_cols=44 Identities=18% Similarity=0.080 Sum_probs=34.6
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
|+.|....|+++|+++| |++||+|++|||+.+.++ .+...+++.
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~--~d~~~~~~~ 81 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQS 81 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTST--THHHHHHHH
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHh
Confidence 45566666777779999 999999999999999765 555566664
No 308
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.62 E-value=2.8e-08 Score=68.85 Aligned_cols=42 Identities=24% Similarity=0.592 Sum_probs=39.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.++..+++.
T Consensus 52 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 93 (129)
T 2dmz_A 52 SVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN 93 (129)
T ss_dssp EECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999998863
No 309
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.61 E-value=1.3e-07 Score=75.54 Aligned_cols=65 Identities=22% Similarity=0.361 Sum_probs=51.2
Q ss_pred CeeCCCCCHHHHHHH-h--------hCCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 26 GTDVRDKSQEEVATI-M--------KGGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 26 g~~v~~~~~~~~~~~-l--------~~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
|..+.+++.+.+.++ + ..|++|..|.++|||+++| |++||+|++|||+.+.+ ..+...+++. +..
T Consensus 230 Gv~~~~l~~~~~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~-~~~ 303 (325)
T 1lcy_A 230 GVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQ 303 (325)
T ss_dssp CEEEEECCHHHHHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTT-CSS
T ss_pred ceEeecCCHHHHHhhCccccccccCCCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhC-CCe
Confidence 666666666544443 2 2589999999999999999 99999999999999964 6888888876 344
No 310
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=1.2e-08 Score=68.89 Aligned_cols=42 Identities=24% Similarity=0.476 Sum_probs=39.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|+|+++|+|+.||+|++|||.++.++++.+++.+++.
T Consensus 50 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~ 91 (111)
T 1uju_A 50 KVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRS 91 (111)
T ss_dssp EECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSS
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999999999999999999999999999999874
No 311
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.60 E-value=6.1e-08 Score=64.50 Aligned_cols=39 Identities=26% Similarity=0.451 Sum_probs=36.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||++ | |++||+|++|||.++.++++.++...++
T Consensus 49 ~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~ 87 (103)
T 1n7t_A 49 RVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLK 87 (103)
T ss_dssp CBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred EECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHHhh
Confidence 5889999999 7 9999999999999999999999888875
No 312
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.60 E-value=5.6e-08 Score=66.12 Aligned_cols=41 Identities=32% Similarity=0.554 Sum_probs=38.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|+.||+|++|||.++.+.++.++..+++
T Consensus 56 ~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~ 96 (114)
T 2gzv_A 56 QVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQ 96 (114)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999998889999988876
No 313
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.60 E-value=2.5e-08 Score=66.55 Aligned_cols=40 Identities=18% Similarity=0.366 Sum_probs=37.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||+++.+++++++.++++
T Consensus 54 ~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 54 KIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp EECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999999998875
No 314
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=3.4e-08 Score=65.50 Aligned_cols=41 Identities=32% Similarity=0.568 Sum_probs=37.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.++|||+++| |+.||+|++|||.++.++++.+++..++.
T Consensus 41 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 81 (101)
T 1uez_A 41 LVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG 81 (101)
T ss_dssp EECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC
Confidence 578999999999 99999999999999999999888887754
No 315
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.60 E-value=6.4e-08 Score=62.71 Aligned_cols=40 Identities=20% Similarity=0.249 Sum_probs=35.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.+.++.++..+++
T Consensus 34 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 73 (90)
T 2eaq_A 34 SVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMA 73 (90)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHH
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHH
Confidence 578999999999 9999999999999997777777776664
No 316
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.60 E-value=5.8e-08 Score=63.75 Aligned_cols=40 Identities=25% Similarity=0.493 Sum_probs=36.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++...++
T Consensus 40 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~ 79 (97)
T 2w4f_A 40 RVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALR 79 (97)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 578999999999 9999999999999999999987776664
No 317
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=6.5e-08 Score=65.32 Aligned_cols=41 Identities=37% Similarity=0.669 Sum_probs=38.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++|||+++|+|++||+|++|||+++.++++.++..+++
T Consensus 45 ~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~ 85 (113)
T 1um7_A 45 FILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALK 85 (113)
T ss_dssp CBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999888776
No 318
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.60 E-value=2.7e-08 Score=68.77 Aligned_cols=41 Identities=32% Similarity=0.548 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |+.||+|++|||.++.++++.++..+++.
T Consensus 67 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 107 (126)
T 2yuy_A 67 QVKEGGPAFEAG-LCTGDRIIKVNGESVIGKTYSQVIALIQN 107 (126)
T ss_dssp CCCSSSHHHHHT-CCSSCCCCEETTEECSSCCHHHHHHHHHT
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 578999999999 99999999999999999999999999874
No 319
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.59 E-value=4.6e-08 Score=66.27 Aligned_cols=40 Identities=30% Similarity=0.376 Sum_probs=37.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++++|+++| |+.||+|++|||.++.+++++++.++++
T Consensus 42 ~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~ 81 (111)
T 1vae_A 42 FLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLK 81 (111)
T ss_dssp CCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999989999988876
No 320
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.59 E-value=2.5e-08 Score=67.92 Aligned_cols=42 Identities=17% Similarity=0.341 Sum_probs=39.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKGG 44 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~g 44 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++..+++..
T Consensus 50 ~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (114)
T 2d8i_A 50 SVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQP 91 (114)
T ss_dssp ECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTSS
T ss_pred EeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 578999999999 999999999999999999999999988864
No 321
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.59 E-value=5.7e-08 Score=63.66 Aligned_cols=39 Identities=26% Similarity=0.451 Sum_probs=35.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||++ | |++||+|++|||.++.++++.+++..++
T Consensus 41 ~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 41 RVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp EECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 5789999999 7 9999999999999999999988888775
No 322
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.59 E-value=4.9e-08 Score=67.11 Aligned_cols=41 Identities=24% Similarity=0.399 Sum_probs=38.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|++||+++|+|++||+|++|||+++.+++++++.++++
T Consensus 51 ~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 91 (122)
T 1v5q_A 51 YIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 91 (122)
T ss_dssp EECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHH
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999988875
No 323
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.58 E-value=5.4e-08 Score=66.47 Aligned_cols=41 Identities=46% Similarity=0.699 Sum_probs=37.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++|+|+.||+|++|||.++.++++.++...++
T Consensus 44 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 84 (119)
T 1tp5_A 44 FILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALK 84 (119)
T ss_dssp EECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999988877775
No 324
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=4.8e-08 Score=66.30 Aligned_cols=40 Identities=25% Similarity=0.521 Sum_probs=37.1
Q ss_pred ccCCCChhhh-cCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAAT-DGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~-~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||++ +| |+.||+|++|||.++.+++++++..+++
T Consensus 49 ~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~l~ 89 (114)
T 1uew_A 49 RIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKLIK 89 (114)
T ss_dssp EECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHHHH
T ss_pred EECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 5789999999 77 9999999999999999999999998885
No 325
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.57 E-value=6.1e-08 Score=68.24 Aligned_cols=41 Identities=32% Similarity=0.487 Sum_probs=38.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++..+++.
T Consensus 70 ~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 110 (139)
T 2vz5_A 70 RVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTK 110 (139)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHCC
T ss_pred EECCCCHHHHCC-CCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 578999999999 99999999999999999999999998863
No 326
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=7.2e-08 Score=66.72 Aligned_cols=42 Identities=31% Similarity=0.503 Sum_probs=38.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKGG 44 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~g 44 (175)
.|.++|||+++| |++||+|++|||.++.++++.+++..++.+
T Consensus 52 ~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 93 (128)
T 1uf1_A 52 GVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS 93 (128)
T ss_dssp EECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC
T ss_pred EECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 578999999999 999999999999999999998888888754
No 327
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.55 E-value=7.2e-08 Score=63.91 Aligned_cols=41 Identities=27% Similarity=0.563 Sum_probs=36.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++|.|++||+|++|||.++.++ +.+++.+++.
T Consensus 41 ~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~ 81 (100)
T 2edp_A 41 KIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKG 81 (100)
T ss_dssp CCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHT
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHh
Confidence 5789999999934999999999999999997 7888887763
No 328
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.55 E-value=2.9e-07 Score=73.32 Aligned_cols=44 Identities=18% Similarity=0.271 Sum_probs=39.4
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
+++|..|.+++||+++| |++||+|++|||+.+.+ +.+...++..
T Consensus 243 g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~l~~~l~~ 286 (324)
T 1y8t_A 243 GAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINS--ADALVAAVRS 286 (324)
T ss_dssp SEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCS--HHHHHHHHHT
T ss_pred ceEEEEECCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHh
Confidence 78899999999999999 99999999999999965 5777777764
No 329
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=9.6e-08 Score=64.29 Aligned_cols=40 Identities=25% Similarity=0.493 Sum_probs=36.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++...++
T Consensus 52 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 91 (110)
T 1x5q_A 52 RVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALR 91 (110)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhh
Confidence 578999999999 9999999999999999999988887775
No 330
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.53 E-value=2.6e-08 Score=82.93 Aligned_cols=45 Identities=31% Similarity=0.483 Sum_probs=39.7
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
.|++|..|.++|||+++| |++||+|++|||+.+.++ .+...++..
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~ 330 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGT 330 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTS
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHh
Confidence 388999999999999999 999999999999999765 667777764
No 331
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=2.6e-07 Score=60.72 Aligned_cols=39 Identities=31% Similarity=0.496 Sum_probs=35.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||+ .| |++||+|++|||.++.++++.++..+++
T Consensus 37 ~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~ 75 (96)
T 2edv_A 37 AVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILR 75 (96)
T ss_dssp CBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHH
T ss_pred EECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 688999994 66 9999999999999999999999988876
No 332
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.52 E-value=9.5e-08 Score=61.67 Aligned_cols=37 Identities=22% Similarity=0.418 Sum_probs=32.4
Q ss_pred CCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 4 VPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 4 ~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+++|||+ +| |++||+|++|||.++.++++.++..+++
T Consensus 34 v~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 70 (88)
T 3bpu_A 34 IVDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLV 70 (88)
T ss_dssp CCC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred ecCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 4899999 77 9999999999999999999999998876
No 333
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.50 E-value=1e-07 Score=64.84 Aligned_cols=40 Identities=28% Similarity=0.552 Sum_probs=36.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |++||+|++|||.++.++++.++...++
T Consensus 48 ~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~ 87 (117)
T 1uit_A 48 KVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIG 87 (117)
T ss_dssp EECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTT
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 9999999999999999999988776554
No 334
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.49 E-value=1e-07 Score=64.54 Aligned_cols=40 Identities=35% Similarity=0.630 Sum_probs=36.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++++|+++| |++||+|++|||.++.++++.++..+++
T Consensus 47 ~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~ 86 (114)
T 1x5n_A 47 HVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLK 86 (114)
T ss_dssp EECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHH
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 578999999999 9999999999999999999888877764
No 335
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.48 E-value=1.2e-07 Score=70.14 Aligned_cols=42 Identities=29% Similarity=0.555 Sum_probs=39.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKGG 44 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~g 44 (175)
.|.|||||+++| |+.||+|++|||.++.++++.++..+++.+
T Consensus 116 ~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~~ 157 (192)
T 3k1r_A 116 HLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRTE 157 (192)
T ss_dssp EECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTSS
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcCC
Confidence 578999999999 999999999999999999999999998764
No 336
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.47 E-value=1.7e-07 Score=64.66 Aligned_cols=41 Identities=24% Similarity=0.428 Sum_probs=38.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.++|||+++| |+.||+|++|||.++.++++.++..+++.
T Consensus 39 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 79 (128)
T 2kjd_A 39 SVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRA 79 (128)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 578999999999 99999999999999999999999888864
No 337
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.47 E-value=1.5e-07 Score=73.11 Aligned_cols=42 Identities=29% Similarity=0.475 Sum_probs=38.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.+||||+++++|+.||+|++|||+++.+++|.+++.+++.
T Consensus 109 ~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~ 150 (263)
T 1z87_A 109 KIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKK 150 (263)
T ss_dssp ECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHH
T ss_pred EECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhc
Confidence 578999999964499999999999999999999999999864
No 338
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.46 E-value=2e-07 Score=62.81 Aligned_cols=40 Identities=28% Similarity=0.500 Sum_probs=37.0
Q ss_pred ccCCCChhhhcCCC-CCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRL-LKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L-~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++|||+++| | +.||+|++|||.++.+++++++..+++
T Consensus 32 ~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~ 72 (112)
T 1qau_A 32 DLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLR 72 (112)
T ss_dssp EECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred EeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999999999 6 999999999999999999999988885
No 339
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.46 E-value=3.2e-07 Score=76.58 Aligned_cols=71 Identities=18% Similarity=0.285 Sum_probs=54.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC----------------------------CeEEEEecCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG----------------------------GILVHDIYPE 53 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~----------------------------gi~V~~v~~g 53 (175)
+|.|||||+++| |+.||+|++|||+++.++++++++.+++. .+||.....-
T Consensus 29 ~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g~~~~~~~~~~~g~s~yVralfdy 107 (468)
T 3shw_A 29 GVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEY 107 (468)
T ss_dssp EECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHHHHHHHHTCCCCEEEEECSCB
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCccchhhhccccccccccccccCc
Confidence 588999999999 99999999999999999999999988752 3455444433
Q ss_pred CcccccC-CcCCCCEEEEECC
Q psy1521 54 GAAAKDA-RLKFGDQILELTG 73 (175)
Q Consensus 54 g~A~~~G-~L~~GD~Il~VNG 73 (175)
.+....+ .++.||.|--+|-
T Consensus 108 ~~~~~~~LsF~~GDIL~V~d~ 128 (468)
T 3shw_A 108 EKESPYGLSFNKGEVFRVVDT 128 (468)
T ss_dssp CCSSTTBCCBCTTCEEEEEES
T ss_pred CCCCCCCceEccCCEEEEeec
Confidence 3333222 1689998887764
No 340
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.46 E-value=3.3e-07 Score=74.96 Aligned_cols=71 Identities=18% Similarity=0.285 Sum_probs=54.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC----------------------------CeEEEEecCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG----------------------------GILVHDIYPE 53 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~----------------------------gi~V~~v~~g 53 (175)
.|.|||||+++| |++||+|++|||.++.++++++++.+++. .+||.....-
T Consensus 37 ~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~~~~~~~~~~~~~~~~vral~dy 115 (391)
T 3tsz_A 37 GVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEY 115 (391)
T ss_dssp EECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHHGGGTSSCCSCCEEEEECSCB
T ss_pred EECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCCccccccccccccccccccccccc
Confidence 588999999999 99999999999999999999999988761 3556544443
Q ss_pred CcccccC-CcCCCCEEEEECC
Q psy1521 54 GAAAKDA-RLKFGDQILELTG 73 (175)
Q Consensus 54 g~A~~~G-~L~~GD~Il~VNG 73 (175)
.+.+..+ .++.||.+--+|-
T Consensus 116 ~~~~~~~Lsf~~Gdil~V~~~ 136 (391)
T 3tsz_A 116 EKESPYGLSFNKGEVFRVVDT 136 (391)
T ss_dssp CCSSTTBCCBCTTCEEEEEES
T ss_pred CCCCCCcceEccCCEEEEEec
Confidence 3333222 2578998777754
No 341
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.45 E-value=1.7e-07 Score=75.46 Aligned_cols=73 Identities=32% Similarity=0.404 Sum_probs=55.9
Q ss_pred CCeEEEEecCCCcccccCCcCC-----------CCEEEEECCeecCCCCHHHHHHHHHcC--CCCCCCCCCCCCCCCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKF-----------GDQILELTGEDFRNITHAKAMAHLRLT--PAKAKPCPTVPSEPNANA 109 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~-----------GD~Il~VNG~~l~~~~~~~a~~~lk~~--~~~~~~~~~~~~~~~~~~ 109 (175)
.|++|..|.++|||+++| |++ ||+|++|||+.+.++ ++...+|... ++.
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~--------------- 312 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDE--------------- 312 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCE---------------
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCE---------------
Confidence 389999999999999999 999 999999999999765 7777777543 333
Q ss_pred CCCCcccceeeeeeeeeecccCCCCCCCCCceEEEEEEeCCCC
Q psy1521 110 TTGEKTTFYFHFQVKLVVLRDTVTKEDDLLEFVDVELTKKAGK 152 (175)
Q Consensus 110 ~~~~~~~~~~~~~v~l~v~r~~~~~~~~~~~~~~v~l~k~~~~ 152 (175)
+.|++.|+... ..++++|...+..
T Consensus 313 -------------v~l~v~R~g~~------~~~~v~l~~~~~~ 336 (348)
T 3qo6_A 313 -------------VTVEVLRGDHK------EKISVTLEPKPDE 336 (348)
T ss_dssp -------------EEEEEECSSSE------EEEEEECEECC--
T ss_pred -------------EEEEEEECCEE------EEEEEEEccCCCC
Confidence 89999987542 3456666554433
No 342
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.42 E-value=2.7e-07 Score=61.71 Aligned_cols=39 Identities=18% Similarity=0.344 Sum_probs=34.7
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+ +| |++||+|++|||.++.++++.++...++
T Consensus 45 ~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (107)
T 2h2b_A 45 DVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLR 83 (107)
T ss_dssp EECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhh
Confidence 578999999 77 9999999999999999999988776664
No 343
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.78 E-value=3e-08 Score=67.29 Aligned_cols=40 Identities=38% Similarity=0.647 Sum_probs=36.0
Q ss_pred ccCCCChhhh-cCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAAT-DGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~-~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|||++ +| |++||+|++|||.++.+.++.++..+++
T Consensus 59 ~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~ 99 (112)
T 2lob_A 59 EIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILS 99 (112)
Confidence 5789999999 66 9999999999999999988888887775
No 344
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.41 E-value=2.6e-07 Score=79.41 Aligned_cols=43 Identities=21% Similarity=0.313 Sum_probs=36.8
Q ss_pred CeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 44 GILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 44 gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
+++|..|.++|||+++| |++||+|++|||+.+.. .+...+++.
T Consensus 497 gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~ 539 (597)
T 4fgm_A 497 GLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILER 539 (597)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTT
T ss_pred eEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHh
Confidence 78999999999999999 99999999999999942 445555654
No 345
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.40 E-value=1.6e-07 Score=63.95 Aligned_cols=39 Identities=26% Similarity=0.423 Sum_probs=35.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
+|.|+|+|+ .| |++||+|++|||.++.++++.+++.+++
T Consensus 52 ~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~ 90 (117)
T 2csj_A 52 DVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLR 90 (117)
T ss_dssp EECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHH
T ss_pred EECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 578999996 66 9999999999999999999999988876
No 346
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.39 E-value=1.7e-07 Score=64.16 Aligned_cols=41 Identities=27% Similarity=0.369 Sum_probs=37.2
Q ss_pred ccCC--CChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVP--GGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~--~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.+ ++||+++| |+.||+|++|||.++.+++++++..+++.
T Consensus 50 ~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~ 92 (118)
T 2yub_A 50 EVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQ 92 (118)
T ss_dssp ECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHC
T ss_pred EecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHh
Confidence 4567 99999999 99999999999999999999999888764
No 347
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.39 E-value=3.4e-07 Score=67.47 Aligned_cols=40 Identities=25% Similarity=0.431 Sum_probs=37.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|.|+|||++ | |+.||+|++|||.++.+++|.+++.+++.
T Consensus 30 ~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 69 (195)
T 2qbw_A 30 RVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKT 69 (195)
T ss_dssp EECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 5789999999 8 99999999999999999999999988763
No 348
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.34 E-value=6.1e-07 Score=60.88 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=30.9
Q ss_pred hhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 8 IAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 8 ~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|..+| |++||+|++|||.++.+++|.+++++|+.
T Consensus 44 ~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~ 78 (113)
T 3soe_A 44 SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQ 78 (113)
T ss_dssp GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 355555 99999999999999999999999999984
No 349
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.33 E-value=2.9e-07 Score=63.49 Aligned_cols=41 Identities=29% Similarity=0.541 Sum_probs=38.0
Q ss_pred ccCCCChhhhcCCC-CCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRL-LKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L-~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.++|||+++| | +.||+|++|||.++.++++.++..+++.
T Consensus 39 ~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~ 80 (127)
T 1b8q_A 39 DLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRG 80 (127)
T ss_dssp CCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHHHS
T ss_pred EeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 588999999999 6 9999999999999999999999998864
No 350
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=7.5e-07 Score=61.24 Aligned_cols=40 Identities=35% Similarity=0.733 Sum_probs=35.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.++|||+++|+|++||+|++|||.++.+ +.++..+++.
T Consensus 54 ~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~ 93 (124)
T 1wh1_A 54 EIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTS 93 (124)
T ss_dssp EECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHh
Confidence 578999999999999999999999999985 6777777753
No 351
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.28 E-value=9.2e-08 Score=76.53 Aligned_cols=48 Identities=17% Similarity=0.342 Sum_probs=0.0
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|++|..|.++|||+++| |++||+|++|||+.+.+ +.+...+++. +..
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~ 301 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVS--ANDVSDVIKR-EST 301 (332)
T ss_dssp ----------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC-CCe
Confidence 488999999999999999 99999999999999954 5677777765 444
No 352
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.28 E-value=1e-06 Score=57.87 Aligned_cols=38 Identities=32% Similarity=0.538 Sum_probs=32.6
Q ss_pred cCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 3 AVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 3 v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
|.+ +|+++| |++||+|++|||.++.+++|.++.++++.
T Consensus 39 v~~--~a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 76 (96)
T 1ujv_A 39 ILD--IQGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKD 76 (96)
T ss_dssp ESC--GGGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred Eec--ccccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 455 266777 99999999999999999999999998863
No 353
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.27 E-value=3.4e-07 Score=75.13 Aligned_cols=42 Identities=19% Similarity=0.280 Sum_probs=36.6
Q ss_pred eEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHc
Q psy1521 45 ILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRL 90 (175)
Q Consensus 45 i~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~ 90 (175)
++|..|.++|||+++| |++||+|++|||+.+.+.. +..+++.
T Consensus 92 ~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~ 133 (403)
T 3k50_A 92 ALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQG 133 (403)
T ss_dssp EEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSC
T ss_pred EEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhC
Confidence 6799999999999999 9999999999999998874 4555555
No 354
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.24 E-value=5.7e-07 Score=59.07 Aligned_cols=31 Identities=26% Similarity=0.406 Sum_probs=28.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKS 33 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~ 33 (175)
.|.|+|||+++| |+.||+|++|||..+.++.
T Consensus 8 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 38 (95)
T 3id1_A 8 EIAANSIAAEAQ-IAPGTELKAVDGIETPDWD 38 (95)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEECSSHH
T ss_pred eeCCCCHHHHcC-CCCCCEEEEECCEECCCHH
Confidence 578999999999 9999999999999999874
No 355
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.23 E-value=8e-07 Score=57.93 Aligned_cols=37 Identities=24% Similarity=0.349 Sum_probs=31.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||++ | |++||+|++|||.++.++ .++..+++
T Consensus 7 ~V~~~spA~~-G-L~~GD~I~~InG~~v~~~--~~l~~~l~ 43 (91)
T 2kjp_A 7 SVVENMPAKG-K-IEVGDKIISADGKNYQSA--EKLIDYIS 43 (91)
T ss_dssp CCCCSSCCSS-C-CCSSCEEEEETTBCCSSH--HHHHHHHS
T ss_pred EECCCChHHH-c-CCCCCEEEEECCEECCCH--HHHHHHHH
Confidence 6889999999 8 999999999999999875 45555554
No 356
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.22 E-value=1.3e-06 Score=56.57 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=31.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIM 41 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l 41 (175)
.|.++|||+++| |+.||+|++|||..+.++ .++...+
T Consensus 10 ~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l 46 (91)
T 2zpm_A 10 NVQPNSAASXAG-LQAGDRIVXVDGQPLTQW--VTFVMLV 46 (91)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEECCCH--HHHHHHH
T ss_pred EECCCChHHhcC-CCCCCEEEEECCeEcCCH--HHHHHHH
Confidence 578999999999 999999999999999876 4444444
No 357
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.22 E-value=7.7e-06 Score=69.35 Aligned_cols=35 Identities=31% Similarity=0.428 Sum_probs=31.8
Q ss_pred CCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCC
Q psy1521 43 GGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNI 79 (175)
Q Consensus 43 ~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~ 79 (175)
.|++|..|.++|||++ + |++||.|++|||+.+.+.
T Consensus 277 ~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~ 311 (539)
T 4fln_A 277 EGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCE 311 (539)
T ss_dssp BCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSS
T ss_pred CceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcC
Confidence 4999999999999987 5 999999999999999653
No 358
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.12 E-value=1.1e-06 Score=66.21 Aligned_cols=40 Identities=25% Similarity=0.434 Sum_probs=36.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.+||+|+++| |+.||+|++|||..+.++++.++..+++
T Consensus 39 ~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~ 78 (216)
T 2krg_A 39 SVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIR 78 (216)
T ss_dssp EECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHH
T ss_pred EeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 478999999999 9999999999999999888888888776
No 359
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.11 E-value=2.3e-06 Score=56.00 Aligned_cols=36 Identities=28% Similarity=0.486 Sum_probs=30.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIM 41 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l 41 (175)
.|.++|||++ | |+.||+|++|||.++.++ .++..++
T Consensus 11 ~V~~~spA~~-G-L~~GD~Il~InG~~v~~~--~~l~~~l 46 (94)
T 2kl1_A 11 SVLPNMPAAG-R-LEAGDRIAAIDGQPINTS--EQIVSYV 46 (94)
T ss_dssp CCCTTSTTBT-T-BCTTCEEEEETTBCCCCH--HHHHHHH
T ss_pred EECCCChHHh-C-CCCCCEEEEECCEECCCH--HHHHHHH
Confidence 6889999998 8 999999999999999875 3444444
No 360
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.05 E-value=5e-06 Score=55.97 Aligned_cols=38 Identities=26% Similarity=0.454 Sum_probs=32.2
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.++|||+++| |++||.|++|||.++.++ .++...++
T Consensus 41 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~ 78 (113)
T 2pzd_A 41 KVILGSPAHRAG-LRPGDVILAIGEQMVQNA--EDVYEAVR 78 (113)
T ss_dssp EEBTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHH
T ss_pred EeCCCChHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHh
Confidence 478999999999 999999999999999864 55666554
No 361
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.02 E-value=1.5e-06 Score=56.03 Aligned_cols=30 Identities=23% Similarity=0.354 Sum_probs=25.6
Q ss_pred CCCChhhhcCCCCCCCEEEEECCeeCCCCCH
Q psy1521 4 VPGGIAATDGRLLKGDQIMSVDGTDVRDKSQ 34 (175)
Q Consensus 4 ~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~ 34 (175)
.|+|+|+++| |++||.|++|||.++.++..
T Consensus 27 ~~~s~A~~aG-l~~GD~I~~ing~~v~~~~d 56 (87)
T 2i6v_A 27 KDPVLFESIG-LQDGDMAVALNGLDLTDPNV 56 (87)
T ss_dssp SCHHHHHHTT-CCTTCEEEEETTEETTCHHH
T ss_pred CCCCHHHHCC-CCCCCEEEEECCEECCCHHH
Confidence 4556669999 99999999999999998753
No 362
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.00 E-value=3e-06 Score=55.99 Aligned_cols=37 Identities=24% Similarity=0.287 Sum_probs=29.8
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||++ | |++||+|++|||.++.++. ++...+.
T Consensus 13 ~V~~~spA~~-G-L~~GD~I~~Ing~~v~~~~--dl~~~l~ 49 (100)
T 3i18_A 13 SVKDDVPAAD-V-LHAGDLITEIDGNAFKSSQ--EFIDYIH 49 (100)
T ss_dssp EECTTSGGGG-T-CCTTCEEEEETTBCCSSHH--HHHHHHH
T ss_pred EeCCCCchHH-C-CCCCCEEEEECCEECCCHH--HHHHHHH
Confidence 5789999995 7 9999999999999998763 4444443
No 363
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.93 E-value=5.5e-06 Score=57.72 Aligned_cols=30 Identities=23% Similarity=0.186 Sum_probs=27.5
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKS 33 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~ 33 (175)
.|.++|||+ +| |+.||+|++|||.++.++.
T Consensus 63 ~V~~~spA~-aG-L~~GD~I~~inG~~v~~~~ 92 (134)
T 2l97_A 63 SVQSNMPAN-GH-LEKYDVITKVDDKEIASST 92 (134)
T ss_dssp ECSTTSGGG-TT-SCSSCEEEEETTEECCCHH
T ss_pred EECCCCchH-HC-CCCCCEEEEECCEEcCCHH
Confidence 578999999 88 9999999999999998864
No 364
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.93 E-value=4.7e-06 Score=56.03 Aligned_cols=37 Identities=24% Similarity=0.475 Sum_probs=31.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIM 41 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l 41 (175)
.|.++|||+++| |++||+|++|||.++.++ .++...+
T Consensus 41 ~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l 77 (112)
T 2p3w_A 41 EVAPNSPSQRGG-IQDGDIIVKVNGRPLVDS--SELQEAV 77 (112)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHH
T ss_pred EECCCChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHH
Confidence 478999999999 999999999999999875 4444444
No 365
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.91 E-value=6.5e-06 Score=54.84 Aligned_cols=37 Identities=22% Similarity=0.335 Sum_probs=28.7
Q ss_pred CCChhhhcCCCCCCCEEEEECCeeCCCCCH-HHHHHHhh
Q psy1521 5 PGGIAATDGRLLKGDQIMSVDGTDVRDKSQ-EEVATIMK 42 (175)
Q Consensus 5 ~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~-~~~~~~l~ 42 (175)
|+|+|+++| |++||+|++|||.++.++.. .+++..++
T Consensus 46 pas~A~~aG-l~~GDvI~~ing~~v~~~~d~~~~~~~~~ 83 (105)
T 2i4s_A 46 DPVLFESIG-LQDGDMAVALNGLDLTDPNVMNTLFQSMN 83 (105)
T ss_dssp CTHHHHHHT-CCTTCEEEEETTEETTSTTHHHHHHHHHT
T ss_pred CCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhcC
Confidence 445569999 99999999999999999975 33444443
No 366
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.84 E-value=1.7e-05 Score=64.68 Aligned_cols=40 Identities=38% Similarity=0.619 Sum_probs=37.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |+.||+|++|||+++.+++..++..+++
T Consensus 105 ~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~ 144 (388)
T 1fc6_A 105 TPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQ 144 (388)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHC
T ss_pred EeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 478999999999 9999999999999999998888888886
No 367
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.77 E-value=7.7e-05 Score=67.39 Aligned_cols=49 Identities=14% Similarity=0.121 Sum_probs=41.6
Q ss_pred CCeEEEEecCC--------CcccccC-CcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 43 GGILVHDIYPE--------GAAAKDA-RLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 43 ~gi~V~~v~~g--------g~A~~~G-~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
++++|..|.++ |||+++| .|+ ||+|++|||+.+.+.. ++..+|+.....
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~ 805 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGT 805 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTS
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCC
Confidence 36789999998 9999999 499 9999999999998875 777888876554
No 368
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.56 E-value=3.9e-05 Score=62.89 Aligned_cols=31 Identities=35% Similarity=0.558 Sum_probs=29.3
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKS 33 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~ 33 (175)
.|.|||||+++| |+.||+|++|||.++.++.
T Consensus 96 ~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~ 126 (403)
T 3k50_A 96 YVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV 126 (403)
T ss_dssp EECTTSHHHHTT-CCTTCEEEEETTBCBCTTT
T ss_pred EeCCCChHHHcC-CCCCCEEEEECCEEccchh
Confidence 588999999999 9999999999999999885
No 369
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.56 E-value=4.3e-05 Score=52.58 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=29.7
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIM 41 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l 41 (175)
.|.++|||+++ |+.||+|++|||.++.++. +....+
T Consensus 31 ~V~~~spA~~a--L~~GD~Il~InG~~v~~~~--dl~~~l 66 (125)
T 2hga_A 31 SVVPGSPASKV--LTPGLVIESINGMPTSNLT--TYSAAL 66 (125)
T ss_dssp EECSSSGGGGT--SCTTCEEEEETTEECSSHH--HHHHHH
T ss_pred EECCCChHHHh--cCCCCEEEEECCEEcCCHH--HHHHHH
Confidence 47899999988 9999999999999999874 444444
No 370
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.53 E-value=5.5e-05 Score=59.95 Aligned_cols=38 Identities=29% Similarity=0.349 Sum_probs=31.9
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMK 42 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 42 (175)
.|.|+|||+++| |+.||+|++|||+++.++ .++..+++
T Consensus 250 ~V~~~spA~~aG-L~~GD~I~~ing~~v~~~--~~l~~~l~ 287 (318)
T 1te0_A 250 EVSPDGPAANAG-IQVNDLIISVDNKPAISA--LETMDQVA 287 (318)
T ss_dssp EECTTSTTTTTC-CCTTCCEEEETTEECCCH--HHHHHHHH
T ss_pred EeCCCChHHHCC-CCCCCEEEEECCEEcCCH--HHHHHHHH
Confidence 578999999999 999999999999999875 44545443
No 371
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.46 E-value=5.8e-05 Score=59.92 Aligned_cols=37 Identities=27% Similarity=0.454 Sum_probs=31.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIM 41 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l 41 (175)
.|.|+|||+++| |+.||+|++|||+++.++. +....+
T Consensus 248 ~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~--~l~~~l 284 (324)
T 1y8t_A 248 EVVAGGAAANAG-VPKGVVVTKVDDRPINSAD--ALVAAV 284 (324)
T ss_dssp EECTTSTTTTTT-CCTTCEEEEETTEECCSHH--HHHHHH
T ss_pred EECCCChHHHcC-CCCCCEEEEECCEECCCHH--HHHHHH
Confidence 578999999999 9999999999999999763 444443
No 372
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.46 E-value=8.9e-05 Score=58.96 Aligned_cols=39 Identities=26% Similarity=0.433 Sum_probs=33.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
.|.|+|||+++| |+.||.|++|||..+.++ ++....++.
T Consensus 262 ~V~~~spA~~aG-l~~GDvI~~ing~~v~~~--~~l~~~l~~ 300 (325)
T 1lcy_A 262 KVILGSPAHRAG-LRPGDVILAIGEQMVQNA--EDVYEAVRT 300 (325)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHTT
T ss_pred EeCcCChHHHCC-CCCCCEEEEECCEEcCCH--HHHHHHHhC
Confidence 578999999999 999999999999999865 556666653
No 373
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.45 E-value=4.4e-05 Score=61.31 Aligned_cols=37 Identities=27% Similarity=0.472 Sum_probs=31.1
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHh
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVATIM 41 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l 41 (175)
.|.|+|||+++| |++||.|++|||+++.++ .+....+
T Consensus 269 ~V~~~spA~~aG-L~~GDvI~~ing~~v~~~--~~l~~~l 305 (345)
T 3stj_A 269 EVLPGSGSAKAG-VKAGDIITSLNGKPLNSF--AELRSRI 305 (345)
T ss_dssp EECTTSHHHHHT-CCTTCEECEETTEECSCH--HHHHHHH
T ss_pred EeccCChHHHcC-CCCCCEEEEECCEECCCH--HHHHHHH
Confidence 578999999999 999999999999999865 3444444
No 374
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.18 E-value=5.7e-05 Score=60.21 Aligned_cols=31 Identities=29% Similarity=0.512 Sum_probs=0.0
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCCCCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVRDKS 33 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~~~~ 33 (175)
.|.++|||+++| |+.||+|++|||+++.++.
T Consensus 260 ~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 290 (332)
T 3num_A 260 EVIPDTPAEAGG-LKENDVIISINGQSVVSAN 290 (332)
T ss_dssp --------------------------------
T ss_pred EeccCCChHHcC-CCCCCEEEEECCEECCCHH
Confidence 578999999999 9999999999999997653
No 375
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.15 E-value=0.00018 Score=57.73 Aligned_cols=37 Identities=43% Similarity=0.628 Sum_probs=31.7
Q ss_pred ccCCCChhhhcCCCCC-----------CCEEEEECCeeCCCCCHHHHHHHh
Q psy1521 2 RAVPGGIAATDGRLLK-----------GDQIMSVDGTDVRDKSQEEVATIM 41 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l 41 (175)
.|.|+|||+++| |+. ||+|++|||+++.++. +....+
T Consensus 257 ~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~~--dl~~~l 304 (348)
T 3qo6_A 257 DAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNGS--DLYRIL 304 (348)
T ss_dssp ECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSSH--HHHHHH
T ss_pred EecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCHH--HHHHHH
Confidence 578999999999 999 9999999999999884 444444
No 376
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.09 E-value=0.00046 Score=59.32 Aligned_cols=28 Identities=25% Similarity=0.355 Sum_probs=26.4
Q ss_pred ccCCCChhhhcCCCCCCCEEEEECCeeCC
Q psy1521 2 RAVPGGIAATDGRLLKGDQIMSVDGTDVR 30 (175)
Q Consensus 2 ~v~~~~~A~~~G~L~~GD~Il~Vng~~v~ 30 (175)
.|.++|||+++| |++||+|++|||..+.
T Consensus 502 ~V~~~spA~~AG-L~~GD~I~aInG~~v~ 529 (597)
T 4fgm_A 502 NVYHDESAYHAG-LSAGDKIIAIDHLQAT 529 (597)
T ss_dssp EECTTSHHHHHT-CCTTCEEEEETTEECC
T ss_pred EeCCCChHHHCC-CCCCCEEEEECCEECC
Confidence 578999999999 9999999999999994
No 377
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=95.46 E-value=0.0097 Score=53.71 Aligned_cols=35 Identities=20% Similarity=0.195 Sum_probs=29.0
Q ss_pred CChhhhcCC-CCCCCEEEEECCeeCCCCCHHHHHHHhhC
Q psy1521 6 GGIAATDGR-LLKGDQIMSVDGTDVRDKSQEEVATIMKG 43 (175)
Q Consensus 6 ~~~A~~~G~-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 43 (175)
+|||+++|. |+ ||+|++|||+++.++. ++..++++
T Consensus 766 ~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~ 801 (1045)
T 1k32_A 766 KSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSE 801 (1045)
T ss_dssp BCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHT
T ss_pred CChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcC
Confidence 499999994 99 9999999999999886 55566653
No 378
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=94.09 E-value=0.069 Score=38.28 Aligned_cols=35 Identities=34% Similarity=0.737 Sum_probs=27.5
Q ss_pred CceEEEEEEeCCCCCcCEEEEc---Cc----CCCceEEEeccC
Q psy1521 139 LEFVDVELTKKAGKGFGLSLVG---RK----QGPGVFISDLVS 174 (175)
Q Consensus 139 ~~~~~v~l~k~~~~~lGfsi~g---g~----~~~gi~I~~i~~ 174 (175)
.+.++|+|.|.. .+|||+|.+ +. ...|+||..|.|
T Consensus 79 ~~~~~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~ 120 (170)
T 3egg_C 79 LELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTE 120 (170)
T ss_dssp SEEEEEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECT
T ss_pred ceEEEEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECC
Confidence 357889998655 789999998 32 346899999986
No 379
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=58.04 E-value=11 Score=32.24 Aligned_cols=15 Identities=33% Similarity=0.818 Sum_probs=14.4
Q ss_pred cCCCCEEEEECCeec
Q psy1521 62 LKFGDQILELTGEDF 76 (175)
Q Consensus 62 L~~GD~Il~VNG~~l 76 (175)
+..||+|++|||+++
T Consensus 110 I~vGdEIlsING~pv 124 (583)
T 3dor_A 110 IRVGDELLEVDGAPV 124 (583)
T ss_dssp SCTTCEEEEETTEEH
T ss_pred CCCCCEEEEECCccH
Confidence 999999999999987
No 380
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=36.86 E-value=19 Score=25.95 Aligned_cols=47 Identities=21% Similarity=0.242 Sum_probs=32.2
Q ss_pred cCCCCCCCEEEEECCeeCCCCCHHHHHHHhhCCeEEEEecCCCccccc-CCcCCCCEE
Q psy1521 12 DGRLLKGDQIMSVDGTDVRDKSQEEVATIMKGGILVHDIYPEGAAAKD-ARLKFGDQI 68 (175)
Q Consensus 12 ~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~gi~V~~v~~gg~A~~~-G~L~~GD~I 68 (175)
+. ++.||-| +|||+++.=. .+....|-..+ +.....-. |.|++||++
T Consensus 34 ~~-~~~GdSI-AvnGvCLTV~-------~~~~~~f~vdv-~ETl~~T~Lg~l~~G~~V 81 (186)
T 3ddy_A 34 QL-VDVDTVM-LVNGCSNTVV-------RILGDMVYFDI-DQALGTTTFDGLKEGDQV 81 (186)
T ss_dssp GG-CCTTCEE-EETTEEEEEE-------EEETTEEEEEE-CTTTTTSSGGGCCTTCEE
T ss_pred cc-CCCCCeE-EEeeEEEEEE-------EEcCCEEEEEh-HHhhhhCchhhcCCCCEE
Confidence 44 8999998 9999986411 12345677778 77665443 668899873
No 381
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=35.09 E-value=28 Score=25.74 Aligned_cols=23 Identities=22% Similarity=0.562 Sum_probs=20.9
Q ss_pred ccccCCcCCCCEEEEECCeecCCC
Q psy1521 56 AAKDARLKFGDQILELTGEDFRNI 79 (175)
Q Consensus 56 A~~~G~L~~GD~Il~VNG~~l~~~ 79 (175)
++++| +..|..++++||.++.+.
T Consensus 52 ~~~d~-~~~~~~~~~~ng~~~~~~ 74 (219)
T 2j3t_D 52 GQRDG-IRVGHAVLAINGMDVNGR 74 (219)
T ss_dssp CCCTT-CCTTCEEEEETTEECBTT
T ss_pred cccCC-ccccceeeecCCccCCCc
Confidence 67888 999999999999999875
No 382
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=33.76 E-value=19 Score=30.65 Aligned_cols=17 Identities=41% Similarity=0.821 Sum_probs=15.1
Q ss_pred CCCCCEEEEECCeeCCC
Q psy1521 15 LLKGDQIMSVDGTDVRD 31 (175)
Q Consensus 15 L~~GD~Il~Vng~~v~~ 31 (175)
+..||+|++|||+++..
T Consensus 110 I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 110 IRVGDELLEVDGAPVQD 126 (583)
T ss_dssp SCTTCEEEEETTEEHHH
T ss_pred CCCCCEEEEECCccHHH
Confidence 89999999999998743
No 383
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=30.23 E-value=51 Score=22.35 Aligned_cols=37 Identities=19% Similarity=0.180 Sum_probs=25.9
Q ss_pred CCcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 53 EGAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 53 gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
|.|-.-.-++++|..|++|.|. +.+.|.++|+.+...
T Consensus 88 G~~~~wva~Vk~G~ilfEi~gv-----~~~~A~eAlr~a~~K 124 (135)
T 3bbo_O 88 GSPEYWVAVVKPGRILYEISGV-----AENIARRAVAIAASK 124 (135)
T ss_dssp SCSSCCCCCCCTTCEEEEECSS-----CTTHHHHHHHHHHHH
T ss_pred CCceEEEEEECCCCEEEEEecC-----CHHHHHHHHHHHHhh
Confidence 3455555569999999999993 346777777765444
No 384
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=29.90 E-value=58 Score=22.31 Aligned_cols=53 Identities=23% Similarity=0.181 Sum_probs=32.6
Q ss_pred hhcCCCCCCCEEEEECCeeCCCCCHHHHHHHhhCCeEEE------EecCCCcccccCCcCCCCEEEEECCee
Q psy1521 10 ATDGRLLKGDQIMSVDGTDVRDKSQEEVATIMKGGILVH------DIYPEGAAAKDARLKFGDQILELTGED 75 (175)
Q Consensus 10 ~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~gi~V~------~v~~gg~A~~~G~L~~GD~Il~VNG~~ 75 (175)
+.+| |.++.+|--+|-.+=..++ ...|. .|.-+|+|++. .++||+|+-+.=-.
T Consensus 51 daAg-Il~~EkV~IvNvnNG~Rfe----------TYvI~GerGSG~I~lNGAAArl--~~~GD~VII~sYa~ 109 (143)
T 1pqh_A 51 DAAG-ILENEAIDIWNVTNGKRFS----------TYAIAAERGSRIISVNGAAAHC--ASVGDIVIIASFVT 109 (143)
T ss_dssp HHHT-CCTTCEEEEEETTTCCEEE----------EEEEEECTTCCCEECCGGGGGT--CCTTCEEEEEEEEE
T ss_pred HHcC-CCCCCEEEEEECCCCceEE----------EEEEEccCCCceEEechHHHcc--CCCCCEEEEEECcc
Confidence 4567 8888888777644322211 11222 24457888885 79999988775433
No 385
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=28.95 E-value=26 Score=22.41 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=18.7
Q ss_pred CCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHH
Q psy1521 5 PGGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVA 38 (175)
Q Consensus 5 ~~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~ 38 (175)
-+|+||+- .++||+|+=+.=. .++.+|+.
T Consensus 45 lNGAAArl--~~~GD~vII~aY~---~~~~~e~~ 73 (97)
T 1uhe_A 45 VNGAAARK--VAIGDVVIILAYA---SMNEDEIN 73 (97)
T ss_dssp EEGGGGGG--CCTTCEEEEEEEE---EECHHHHH
T ss_pred EchHHHcc--CCCCCEEEEEECc---cCCHHHHh
Confidence 36778776 6899999866433 33455553
No 386
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=28.92 E-value=35 Score=25.21 Aligned_cols=44 Identities=20% Similarity=0.393 Sum_probs=31.9
Q ss_pred hhhcCCCCCCCEEEEECCeeCCCCC--H-HHHHHHh----hCCeEEEEecCC
Q psy1521 9 AATDGRLLKGDQIMSVDGTDVRDKS--Q-EEVATIM----KGGILVHDIYPE 53 (175)
Q Consensus 9 A~~~G~L~~GD~Il~Vng~~v~~~~--~-~~~~~~l----~~gi~V~~v~~g 53 (175)
++++| +..|..++++||.++.... . .++...+ ..++|+..-.+.
T Consensus 52 ~~~d~-~~~~~~~~~~ng~~~~~~~~~d~~~v~~~iigk~N~PLyir~f~~~ 102 (219)
T 2j3t_D 52 GQRDG-IRVGHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPR 102 (219)
T ss_dssp CCCTT-CCTTCEEEEETTEECBTTBCTTSSBHHHHTTCGGGCSEEEEEECCC
T ss_pred cccCC-ccccceeeecCCccCCCcccccCceeeeeeecCCCCceEEEecCCC
Confidence 56788 9999999999999998542 1 2444444 358888877553
No 387
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=28.69 E-value=27 Score=22.59 Aligned_cols=29 Identities=31% Similarity=0.344 Sum_probs=18.5
Q ss_pred CChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy1521 6 GGIAATDGRLLKGDQIMSVDGTDVRDKSQEEVAT 39 (175)
Q Consensus 6 ~~~A~~~G~L~~GD~Il~Vng~~v~~~~~~~~~~ 39 (175)
+|+||+- .++||+|+-+.=. .++.+|+..
T Consensus 47 NGAAArl--~~~GD~vII~aY~---~~~~~e~~~ 75 (102)
T 3plx_B 47 NGAAARL--AEVGDKVIIMSYA---DFNEEEAKT 75 (102)
T ss_dssp EGGGGGG--CCTTCEEEEEEEE---EEEHHHHHH
T ss_pred CcHHHhc--cCCCCEEEEEEcc---cCCHHHHhc
Confidence 5778776 6899999866322 334555543
No 388
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=28.66 E-value=26 Score=22.39 Aligned_cols=18 Identities=33% Similarity=0.410 Sum_probs=13.5
Q ss_pred CChhhhcCCCCCCCEEEEEC
Q psy1521 6 GGIAATDGRLLKGDQIMSVD 25 (175)
Q Consensus 6 ~~~A~~~G~L~~GD~Il~Vn 25 (175)
+|+||+- .++||+|+-+.
T Consensus 48 NGAAArl--~~~GD~vII~a 65 (96)
T 1vc3_B 48 NGAAAHL--VKPGDLVILVA 65 (96)
T ss_dssp EGGGGGT--CCTTCEEEEEE
T ss_pred chHHHcc--CCCCCEEEEEE
Confidence 5677665 78999998663
No 389
>2ftc_I Mitochondrial ribosomal protein L16, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_I
Probab=24.40 E-value=38 Score=22.42 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=26.6
Q ss_pred CcccccCCcCCCCEEEEECCeecCCCCHHHHHHHHHcCCCC
Q psy1521 54 GAAAKDARLKFGDQILELTGEDFRNITHAKAMAHLRLTPAK 94 (175)
Q Consensus 54 g~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~lk~~~~~ 94 (175)
.|-.-.-++++|..|++|.| + .+.+.|.++|+.+..+
T Consensus 76 ~~~~wva~Vk~G~ilfEi~g-~---~~~~~a~eAlr~a~~K 112 (118)
T 2ftc_I 76 AIDHYVTPVKAGRLVVEMGG-R---CEFEEVQGFLDQVAHK 112 (118)
T ss_pred CccEEEEEECCCCEEEEEec-c---CCHHHHHHHHHHHHhh
Confidence 33333344899999999999 2 4568888888876555
No 390
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=23.44 E-value=37 Score=22.31 Aligned_cols=17 Identities=35% Similarity=0.433 Sum_probs=13.0
Q ss_pred CChhhhcCCCCCCCEEEEE
Q psy1521 6 GGIAATDGRLLKGDQIMSV 24 (175)
Q Consensus 6 ~~~A~~~G~L~~GD~Il~V 24 (175)
+|+||+- .++||+|+-+
T Consensus 75 NGAAAr~--~~~GD~vII~ 91 (114)
T 3oug_A 75 NGPAARR--CEIGDQLFII 91 (114)
T ss_dssp EGGGGGG--CCTTCEEEEE
T ss_pred CCHHHhc--cCCCCEEEEE
Confidence 5777766 6899999755
No 391
>3pjy_A Hypothetical signal peptide protein; DUF192 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Sinorhizobium meliloti}
Probab=22.02 E-value=23 Score=24.03 Aligned_cols=23 Identities=17% Similarity=0.322 Sum_probs=16.9
Q ss_pred eEEEEecCCCcccccCCcCCCCEEE
Q psy1521 45 ILVHDIYPEGAAAKDARLKFGDQIL 69 (175)
Q Consensus 45 i~V~~v~~gg~A~~~G~L~~GD~Il 69 (175)
-||.++.. |.+++.| |++||+|.
T Consensus 103 ~~VLEl~a-G~~~~~g-i~~Gd~v~ 125 (136)
T 3pjy_A 103 AYVLELNA-GTVKRLG-VSPGDRLE 125 (136)
T ss_dssp EEEEEEET-THHHHHT-CCTTCEEE
T ss_pred eEEEEeCc-ChHHhcC-CCCCCEEE
Confidence 46777754 5566668 99999985
No 392
>1o65_A Hypothetical protein YIIM; structural genomics, unknown function; 2.33A {Escherichia coli} SCOP: b.58.1.2 PDB: 1o67_A
Probab=20.96 E-value=1.3e+02 Score=22.49 Aligned_cols=69 Identities=16% Similarity=0.103 Sum_probs=45.0
Q ss_pred CCCCCEEEEECCeeCCCCCHHHH------HHH----hhCCeEEEEecCCCcccccCCcCCCCEEEEECCeecCCCCHHHH
Q psy1521 15 LLKGDQIMSVDGTDVRDKSQEEV------ATI----MKGGILVHDIYPEGAAAKDARLKFGDQILELTGEDFRNITHAKA 84 (175)
Q Consensus 15 L~~GD~Il~Vng~~v~~~~~~~~------~~~----l~~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a 84 (175)
|+.||.+|+|-+.-...+..... ... -+.|+|-.=+ .+ |.+++||.|.-+.- . ..+|..++
T Consensus 116 lrIG~avLeVTq~r~PC~~~~~~~g~~~~~~~~~~~~r~G~y~rVl-~~------G~V~~GD~v~l~~r-~-~~~tv~~~ 186 (246)
T 1o65_A 116 FRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVI-AP------GKVSADAPLELVSR-V-SDVTVQEA 186 (246)
T ss_dssp EEETTEEEEEEEECCCCTHHHHHTTCTTHHHHHHHHTCCCEEEEEE-EC------EEEETTSCEEEEEC-C-CSCBHHHH
T ss_pred EEECCEEEEEEeCcCccHhHHHHhcCcCHHHHHhhCCCcEEEEEEe-eC------cEEcCCCEEEEecC-C-CCCCHHHH
Confidence 67778888887655554432221 112 3468876544 33 56999999988866 4 78888888
Q ss_pred HHHHHcCC
Q psy1521 85 MAHLRLTP 92 (175)
Q Consensus 85 ~~~lk~~~ 92 (175)
..++-...
T Consensus 187 ~~~~~~~~ 194 (246)
T 1o65_A 187 AAIAWHMP 194 (246)
T ss_dssp HHHHHTSC
T ss_pred HHHHhcCC
Confidence 88776544
No 393
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=20.75 E-value=1.3e+02 Score=17.66 Aligned_cols=49 Identities=24% Similarity=0.408 Sum_probs=26.0
Q ss_pred EEECCeeCC--CCCHHHHHHHhh---CCeEEE---EecCCCcccccCCcCCCCEEEEE
Q psy1521 22 MSVDGTDVR--DKSQEEVATIMK---GGILVH---DIYPEGAAAKDARLKFGDQILEL 71 (175)
Q Consensus 22 l~Vng~~v~--~~~~~~~~~~l~---~gi~V~---~v~~gg~A~~~G~L~~GD~Il~V 71 (175)
+.|||.... ..+-.+.++.+. .++.|. .+.|.+-.+. -.|+.||+|--+
T Consensus 3 I~vNG~~~e~~~~Tl~~LL~~l~~~~~~vAV~vNg~iVpr~~~~~-~~L~dGD~veIv 59 (73)
T 2kl0_A 3 VTINGEQREVQSASVAALMTELDCTGGHFAVALNYDVVPRGKWDE-TPVTAGDEIEIL 59 (73)
T ss_dssp EEETTEEECCCCSBHHHHHHHTTCCSSSCEEEESSSEECHHHHTT-CBCCTTCEEEEE
T ss_pred EEECCEEEEcCCCcHHHHHHHcCCCCCcEEEEECCEECChHHcCc-ccCCCCCEEEEE
Confidence 578997664 445566666654 233322 1112221112 249999987655
Done!