Your job contains 1 sequence.
>psy15210
MLKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLR
YCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRH
TSFSSLFVYPEINNLINININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQC
QNDRSQHRNKSEAWDMLKSKLYKLKLQYQIKEKKKLEDTKKDIKWGYQIRSYVLDKSRIK
DLRTNLETKNIKDILDGDLDNFIIASLKQHLLNKITKN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15210
(278 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P07012 - symbol:prfB species:83333 "Escherichia... 776 4.3e-77 1
TIGR_CMR|GSU_2278 - symbol:GSU_2278 "peptide chain releas... 677 1.3e-66 1
TIGR_CMR|ECH_0705 - symbol:ECH_0705 "peptide chain releas... 652 6.0e-64 1
TIGR_CMR|NSE_0604 - symbol:NSE_0604 "peptide chain releas... 646 2.6e-63 1
TIGR_CMR|CJE_1628 - symbol:CJE_1628 "peptide chain releas... 617 3.1e-60 1
TIGR_CMR|APH_0479 - symbol:APH_0479 "peptide chain releas... 611 1.3e-59 1
TIGR_CMR|SPO_2585 - symbol:SPO_2585 "peptide chain releas... 607 3.5e-59 1
UNIPROTKB|Q3Z8Y6 - symbol:prfB "Peptide chain release fac... 605 5.7e-59 1
TIGR_CMR|DET_0570 - symbol:DET_0570 "peptide chain releas... 605 5.7e-59 1
TAIR|locus:2010748 - symbol:AT1G56350 species:3702 "Arabi... 575 8.6e-56 1
TIGR_CMR|CHY_0163 - symbol:CHY_0163 "peptide chain releas... 568 4.8e-55 1
TAIR|locus:2158936 - symbol:HCF109 "high chlorophyll fluo... 533 2.4e-51 1
DICTYBASE|DDB_G0288835 - symbol:prfB "class I peptide cha... 514 2.5e-49 1
UNIPROTKB|P66026 - symbol:prfB "Peptide chain release fac... 502 4.7e-48 1
TIGR_CMR|CPS_3552 - symbol:CPS_3552 "peptide chain releas... 467 2.4e-44 1
TIGR_CMR|SO_3833 - symbol:SO_3833 "peptide chain release ... 465 3.9e-44 1
UNIPROTKB|Q9KQ25 - symbol:prfA "Peptide chain release fac... 462 8.1e-44 1
TIGR_CMR|VC_2179 - symbol:VC_2179 "peptide chain release ... 462 8.1e-44 1
TIGR_CMR|CBU_1965 - symbol:CBU_1965 "peptide chain releas... 456 3.5e-43 1
UNIPROTKB|P0A7I0 - symbol:prfA "peptide chain release fac... 455 4.5e-43 1
TIGR_CMR|CHY_2563 - symbol:CHY_2563 "peptide chain releas... 431 1.6e-40 1
TIGR_CMR|APH_0420 - symbol:APH_0420 "peptide chain releas... 362 1.9e-39 2
TIGR_CMR|GSU_3104 - symbol:GSU_3104 "peptide chain releas... 408 4.3e-38 1
TIGR_CMR|ECH_0597 - symbol:ECH_0597 "peptide chain releas... 339 4.5e-38 2
UNIPROTKB|P66016 - symbol:prfA "Peptide chain release fac... 406 7.0e-38 1
TIGR_CMR|CJE_1784 - symbol:CJE_1784 "peptide chain releas... 396 8.0e-37 1
TIGR_CMR|SPO_2461 - symbol:SPO_2461 "peptide chain releas... 387 7.2e-36 1
TAIR|locus:2041409 - symbol:AT2G47020 species:3702 "Arabi... 339 1.2e-35 2
TIGR_CMR|BA_5572 - symbol:BA_5572 "peptide chain release ... 376 1.1e-34 1
DICTYBASE|DDB_G0283175 - symbol:prfA "peptide chain relea... 368 7.4e-34 1
TIGR_CMR|NSE_0406 - symbol:NSE_0406 "peptide chain releas... 367 9.5e-34 1
UNIPROTKB|Q9UGC7 - symbol:MTRF1L "Peptide chain release f... 320 2.4e-33 2
UNIPROTKB|E1BXF8 - symbol:MTRF1 "Uncharacterized protein"... 301 2.1e-32 2
TIGR_CMR|DET_1210 - symbol:DET_1210 "peptide chain releas... 348 9.8e-32 1
UNIPROTKB|Q3MHI7 - symbol:MTRF1 "Peptide chain release fa... 296 6.8e-31 2
UNIPROTKB|F1MCM1 - symbol:MTRF1L "Peptide chain release f... 340 6.9e-31 1
UNIPROTKB|Q2KI15 - symbol:MTRF1L "Peptide chain release f... 340 6.9e-31 1
UNIPROTKB|F1RJ87 - symbol:MTRF1 "Uncharacterized protein"... 295 1.5e-30 2
UNIPROTKB|F1S7X5 - symbol:MTRF1L "Uncharacterized protein... 336 1.8e-30 1
MGI|MGI:1918830 - symbol:Mtrf1l "mitochondrial translatio... 336 1.8e-30 1
RGD|1598312 - symbol:Mtrf1l "mitochondrial translational ... 336 1.8e-30 1
ZFIN|ZDB-GENE-030131-8198 - symbol:mtrf1l "mitochondrial ... 335 2.3e-30 1
UNIPROTKB|E2RAT2 - symbol:MTRF1 "Uncharacterized protein"... 296 2.5e-30 2
POMBASE|SPAC2F7.17 - symbol:SPAC2F7.17 "mitochondrial pep... 334 3.0e-30 1
UNIPROTKB|O75570 - symbol:MTRF1 "Peptide chain release fa... 295 4.7e-30 2
UNIPROTKB|F1NW58 - symbol:MTRF1L "Uncharacterized protein... 328 1.3e-29 1
UNIPROTKB|E2QTM1 - symbol:MTRF1L "Uncharacterized protein... 327 1.6e-29 1
TAIR|locus:2099137 - symbol:APG3 "AT3G62910" species:3702... 324 3.4e-29 1
MGI|MGI:2384815 - symbol:Mtrf1 "mitochondrial translation... 285 4.3e-29 2
SGD|S000003111 - symbol:MRF1 "Mitochondrial translation r... 321 7.1e-29 1
UNIPROTKB|B4DG01 - symbol:MTRF1 "Peptide chain release fa... 295 1.5e-28 2
ASPGD|ASPL0000035902 - symbol:AN3462 species:162425 "Emer... 309 1.3e-27 1
CGD|CAL0003702 - symbol:orf19.1303 species:5476 "Candida ... 266 1.9e-26 2
FB|FBgn0032486 - symbol:CG5705 species:7227 "Drosophila m... 298 1.9e-26 1
UNIPROTKB|F6V8L3 - symbol:MTRF1L "Uncharacterized protein... 290 1.4e-25 1
WB|WBGene00020993 - symbol:W03F8.3 species:6239 "Caenorha... 256 4.1e-25 2
ZFIN|ZDB-GENE-050220-8 - symbol:zgc:113104 "zgc:113104" s... 238 4.9e-24 2
UNIPROTKB|Q5TF45 - symbol:MTRF1L "Peptide chain release f... 256 5.5e-22 1
GENEDB_PFALCIPARUM|PF14_0265 - symbol:PF14_0265 "peptide ... 227 6.5e-19 1
UNIPROTKB|Q8ILH8 - symbol:PF14_0265 "Peptide chain releas... 227 6.5e-19 1
GENEDB_PFALCIPARUM|MAL7P1.20 - symbol:MAL7P1.20 "peptide ... 214 2.8e-17 1
UNIPROTKB|Q8IC21 - symbol:MAL7P1.20 "Peptide chain releas... 214 2.8e-17 1
TAIR|locus:2082563 - symbol:PrfB3 "peptide chain release ... 176 1.3e-16 2
UNIPROTKB|Q74EJ1 - symbol:GSU0971 "Hydrolase, putative" s... 172 4.4e-13 1
TIGR_CMR|GSU_0971 - symbol:GSU_0971 "peptidyl-tRNA hydrol... 172 4.4e-13 1
TAIR|locus:2006897 - symbol:AT1G33330 species:3702 "Arabi... 169 7.4e-12 1
UNIPROTKB|Q74FR0 - symbol:GSU0546 "Peptidyl-tRNA hydrolas... 141 1.2e-09 1
TIGR_CMR|GSU_0546 - symbol:GSU_0546 "peptidyl-tRNA hydrol... 141 1.2e-09 1
CGD|CAL0005347 - symbol:orf19.5488 species:5476 "Candida ... 132 1.4e-08 1
SGD|S000004271 - symbol:YLR281C "Putative protein of unkn... 115 1.2e-06 1
UNIPROTKB|F1NSN8 - symbol:F1NSN8 "Uncharacterized protein... 113 2.0e-06 1
FB|FBgn0050100 - symbol:CG30100 species:7227 "Drosophila ... 110 4.4e-06 1
UNIPROTKB|F5H4X5 - symbol:C12orf65 "Probable peptide chai... 102 3.5e-05 1
POMBASE|SPBC1105.18c - symbol:SPBC1105.18c "peptide relea... 107 0.00015 1
UNIPROTKB|Q9H3J6 - symbol:C12orf65 "Probable peptide chai... 102 0.00094 1
>UNIPROTKB|P07012 [details] [associations]
symbol:prfB species:83333 "Escherichia coli K-12"
[GO:0015858 "nucleoside transport" evidence=IMP] [GO:0015864
"pyrimidine nucleoside transport" evidence=IMP] [GO:0015862
"uridine transport" evidence=IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA;IDA] [GO:0006415 "translational
termination" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR Gene3D:3.30.160.20 EMBL:U28375
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 EMBL:M11520 EMBL:J03795 PIR:C65073
RefSeq:NP_417367.1 RefSeq:YP_491092.1 PDB:1GQE PDB:1MI6 PDB:1ML5
PDBsum:1GQE PDBsum:1MI6 PDBsum:1ML5 ProteinModelPortal:P07012
SMR:P07012 DIP:DIP-10559N IntAct:P07012 MINT:MINT-1238444
PaxDb:P07012 PRIDE:P07012 EnsemblBacteria:EBESCT00000002308
EnsemblBacteria:EBESCT00000016130 GeneID:12930712 GeneID:947369
KEGG:ecj:Y75_p2823 KEGG:eco:b2891 PATRIC:32121192 EchoBASE:EB0755
EcoGene:EG10762 BioCyc:EcoCyc:EG10762-MONOMER
BioCyc:ECOL316407:JW5847-MONOMER EvolutionaryTrace:P07012
Genevestigator:P07012 GO:GO:0015862 Uniprot:P07012
Length = 365
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 149/260 (57%), Positives = 180/260 (69%)
Query: 12 LNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEI 71
L K+ ++EF + F+ D +C++DIQ+G+GG EAQDWASML R YLR+ E +GF EI
Sbjct: 106 LEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEI 165
Query: 72 LEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPE 131
+E+S GE+ GIK+VT+KI G YAYG+L++E+G+HRLVRKSPFDS RHTSFSS FVYPE
Sbjct: 166 IEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPE 225
Query: 132 XXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKS 191
PADLRID YR SGAGGQH+N+T+SAVRITHIPTGIV QCQNDRSQH+NK
Sbjct: 226 VDDDIDIEINPADLRIDVYRTSGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKD 285
Query: 192 EAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIKDLRTNLETKNI 251
+A WG QIRSYVLD SRIKDLRT +ET+N
Sbjct: 286 QAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNT 345
Query: 252 KDILDGDLDNFIIASLKQHL 271
+ +LDG LD FI ASLK L
Sbjct: 346 QAVLDGSLDQFIEASLKAGL 365
>TIGR_CMR|GSU_2278 [details] [associations]
symbol:GSU_2278 "peptide chain release factor 2,
programmed frameshift" species:243231 "Geobacter sulfurreducens
PCA" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:NP_953327.1
ProteinModelPortal:Q74AS3 SMR:Q74AS3 GeneID:2686956
KEGG:gsu:GSU2278 PATRIC:22027411 ProtClustDB:CLSK828793
Uniprot:Q74AS3
Length = 372
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 132/267 (49%), Positives = 173/267 (64%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRY 61
L E+ + L +++ EF + + P D N+CF+ I +GAGG EAQDWA MLLR YLRY
Sbjct: 94 LDEVRALNDSLEREVEGAEFQRMLSGPHDKNSCFVSINAGAGGTEAQDWAEMLLRMYLRY 153
Query: 62 CERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHT 121
CERKG+ EI + G+ G+K+ T + G+YAYG+LK+E+GIHRLVR SPFDS+ RHT
Sbjct: 154 CERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAEAGIHRLVRISPFDSNARRHT 213
Query: 122 SFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 181
SF+S+FV+PE +DLR+DTYR+SGAGGQH+N TDSAVR+TH+PTGIVV CQ
Sbjct: 214 SFASVFVFPEIEDDIEIKIAESDLRVDTYRSSGAGGQHVNTTDSAVRLTHLPTGIVVACQ 273
Query: 182 NDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSR-IK 240
+RSQH NK+ A M WG QIRSYVL + +K
Sbjct: 274 CERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKKDIGWGSQIRSYVLHPYKMVK 333
Query: 241 DLRTNLETKNIKDILDGDLDNFIIASL 267
DLRT +E+ N +LDG L++F++A L
Sbjct: 334 DLRTGVESGNPDAVLDGALEDFVVAFL 360
>TIGR_CMR|ECH_0705 [details] [associations]
symbol:ECH_0705 "peptide chain release factor 2,
programmed frameshift" species:205920 "Ehrlichia chaffeensis str.
Arkansas" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 eggNOG:COG1186
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_507510.1
ProteinModelPortal:Q2GGC3 STRING:Q2GGC3 GeneID:3927613
KEGG:ech:ECH_0705 PATRIC:20576858 ProtClustDB:CLSK748740
Uniprot:Q2GGC3
Length = 366
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 132/269 (49%), Positives = 175/269 (65%)
Query: 1 MLKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLR 60
+L E+E KL K+++ E F++ D N+CFI+IQSGAGG E+ DW+SML R Y+R
Sbjct: 94 LLNELEAGLAKLKEKVQKKEVECLFSNEADHNDCFIEIQSGAGGTESNDWSSMLFRMYVR 153
Query: 61 YCE-RKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNR 119
+ E F EI+ K +GE G+K+ T+K+ G AYG+ K+ESGIHRLVR SPF+S+ R
Sbjct: 154 WAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYGWAKTESGIHRLVRISPFNSNAKR 213
Query: 120 HTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQ 179
HT+FSS+ V P DLRIDTYRASGAGGQH+NKT+SAVRITHIP+GIVVQ
Sbjct: 214 HTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQ 273
Query: 180 CQNDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSR- 238
CQN+RSQH+N +EA ++ WG QIRSYV+ +
Sbjct: 274 CQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRSYVMHPYQM 333
Query: 239 IKDLRTNLETKNIKDILDGDLDNFIIASL 267
+KD+RT E N+ +LDG+LD+FII++L
Sbjct: 334 VKDIRTGHEVGNVNSVLDGNLDSFIISAL 362
>TIGR_CMR|NSE_0604 [details] [associations]
symbol:NSE_0604 "peptide chain release factor 2,
programmed frameshift" species:222891 "Neorickettsia sennetsu str.
Miyayama" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 eggNOG:COG1186 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 HOGENOM:HOG000074814
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020
RefSeq:YP_506484.1 ProteinModelPortal:Q2GDG2 STRING:Q2GDG2
GeneID:3931929 KEGG:nse:NSE_0604 PATRIC:22681243 OMA:SAVRITY
ProtClustDB:CLSK2527643 Uniprot:Q2GDG2
Length = 365
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 133/271 (49%), Positives = 173/271 (63%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRY 61
+K++E L KI++ E F+ D N+C ++IQSGAGG E+ DWA MLLR Y R+
Sbjct: 94 MKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEIQSGAGGTESNDWAMMLLRMYTRW 153
Query: 62 CE-RKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRH 120
E F V+I++K GE TGIK+ TLK+ GK AYG+ ++E+G+HRLVR SPFD++ RH
Sbjct: 154 AEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWARTETGVHRLVRISPFDANAKRH 213
Query: 121 TSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQC 180
TSF+ +FV P DL+IDTYRASGAGGQH+NKT+SA+RITH+P+ IVVQ
Sbjct: 214 TSFAKIFVSPCIEGEINISIDEKDLKIDTYRASGAGGQHVNKTESAIRITHLPSKIVVQS 273
Query: 181 QNDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSR-I 239
Q+ RSQH+NK+EA M WGYQIRSYVL + I
Sbjct: 274 QSSRSQHQNKAEAMQMLKSRLYEIELRKKEEKLNAARNVEDSIGWGYQIRSYVLHPYQMI 333
Query: 240 KDLRTNLETKNIKDILDGDLDNFIIASLKQH 270
KDLRT E NI +LDGDLD+FIIA++ +
Sbjct: 334 KDLRTGHEVGNITSVLDGDLDSFIIATISNN 364
>TIGR_CMR|CJE_1628 [details] [associations]
symbol:CJE_1628 "peptide chain release factor 2"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1186
GO:GO:0016149 RefSeq:YP_179609.1 ProteinModelPortal:Q5HSX6
STRING:Q5HSX6 GeneID:3232256 KEGG:cjr:CJE1628 PATRIC:20045053
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
BioCyc:CJEJ195099:GJC0-1658-MONOMER PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 Uniprot:Q5HSX6
Length = 365
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 129/271 (47%), Positives = 165/271 (60%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRY 61
L+ + ++ KL + I +E + D N + I GAGG E+ DWAS+L R YLR+
Sbjct: 95 LEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRF 154
Query: 62 CERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHT 121
CER+GF VE L+ GE G+K V+ +KG+ AYG+LK+E+GIHRLVR SPFDS+ RHT
Sbjct: 155 CEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHT 214
Query: 122 SFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 181
SFSS+ V PE D+RID YRASGAGGQH+NKT+SAVRITH PTGIVVQCQ
Sbjct: 215 SFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQ 274
Query: 182 NDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVL-DKSRIK 240
NDRSQH+NK+ A+ M WG+QIRSYVL ++K
Sbjct: 275 NDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGEKSEIG--WGHQIRSYVLFPYQQVK 332
Query: 241 DLRTNLETKNIKDILDGDLDNFI---IASLK 268
D R+ + +ILDGD+ I + SLK
Sbjct: 333 DNRSGEAFSQVDNILDGDIKKMIEGVLISLK 363
>TIGR_CMR|APH_0479 [details] [associations]
symbol:APH_0479 "peptide chain release factor 2,
programmed frameshift" species:212042 "Anaplasma phagocytophilum
HZ" [GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1186 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 RefSeq:YP_505078.1 ProteinModelPortal:Q2GKM3
STRING:Q2GKM3 GeneID:3930254 KEGG:aph:APH_0479 PATRIC:20949594
ProtClustDB:CLSK747346 Uniprot:Q2GKM3
Length = 376
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 129/279 (46%), Positives = 171/279 (61%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRY 61
L I L +I + + F+ D N+CF+ I+SGAGG E+ DW MLLR Y ++
Sbjct: 96 LATINAELQSLKLRISQKKTECMFSHEADANSCFLTIRSGAGGTESSDWVCMLLRMYTKW 155
Query: 62 CER-KGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRH 120
E F VE ++ +GE TG+K VT+KI G AYG+ ++ESGIHRLVR SPFD + RH
Sbjct: 156 AESFHEFTVETVDSVDGEETGLKAVTVKICGIGAYGWARTESGIHRLVRISPFDHAAKRH 215
Query: 121 TSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQC 180
TSF+S+ V P DLRIDTYRASGAGGQH+NKT+SAVRITHIP+G+VVQC
Sbjct: 216 TSFASVEVSPVVDHEIDIKILEKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGMVVQC 275
Query: 181 QNDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSR-I 239
Q RSQH+N++EA+ + WG+QIRSYV+ R +
Sbjct: 276 QTSRSQHQNRAEAYSLLKSRLYEMELQEKEKRMAQDHQNKCEIGWGHQIRSYVMHPYRMV 335
Query: 240 KDLRTNLETKNIKDILDGDLDNFIIASLKQHLLNKITKN 278
KDLRT ET N+ +++GDLD FI A+L + L K+ ++
Sbjct: 336 KDLRTGHETGNVDAVMNGDLDAFITAALMRGSLAKVQRS 374
>TIGR_CMR|SPO_2585 [details] [associations]
symbol:SPO_2585 "peptide chain release factor 2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.160.20 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_167798.1
ProteinModelPortal:Q5LQA8 SMR:Q5LQA8 GeneID:3194310
KEGG:sil:SPO2585 PATRIC:23378573 Uniprot:Q5LQA8
Length = 375
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 126/275 (45%), Positives = 167/275 (60%)
Query: 1 MLKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLR 60
++K+ E L + E E + D N+ F++I +GAGG E+ DWASML R Y+R
Sbjct: 93 VIKDAEAALKALRERAAEKELEALLDGEADGNDTFLEINAGAGGTESCDWASMLARMYVR 152
Query: 61 YCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRH 120
+ E+KG+ VE+ +S G+ GIK+ KI G AYG+LKSESG+HRLVR SP+D++ RH
Sbjct: 153 WAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPYDAAAKRH 212
Query: 121 TSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQC 180
TSFSS++VYP P+D+RIDTYR+SGAGGQH+N TDSAVRITHIPTGIVV
Sbjct: 213 TSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVT- 271
Query: 181 QNDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSR-I 239
+++SQH+N+ A WG QIRSYVL + +
Sbjct: 272 SSEKSQHQNRDIAMKALKSRLYQQELDRRNAEINAAHEAKGDAGWGNQIRSYVLQPYQMV 331
Query: 240 KDLRTNLETKNIKDILDGDLDNFIIASLKQHLLNK 274
KDLRT ET + K +LDG LD F+ A+L + K
Sbjct: 332 KDLRTGHETSDTKGVLDGALDGFMAATLAMKVSGK 366
>UNIPROTKB|Q3Z8Y6 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG1186 GO:GO:0003747
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:YP_181313.1
ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6 GeneID:3230122
KEGG:det:DET0570 PATRIC:21608209 ProtClustDB:CLSK837416
Uniprot:Q3Z8Y6
Length = 362
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 119/269 (44%), Positives = 168/269 (62%)
Query: 4 EIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCE 63
EIE N L +I +E F+ D N + + +GAGG+E+QDWA MLLR ++R+ E
Sbjct: 90 EIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTVHAGAGGVESQDWAGMLLRMFMRWAE 149
Query: 64 RKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSF 123
+KGF +E+L++S GE GIK+ TL+I+G+YAYGFLKSE G+HRL+R SPFD+ + RHTSF
Sbjct: 150 KKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSPFDADHARHTSF 209
Query: 124 SSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQND 183
+ + V PE P D++ID +R+SG GGQ++ K +AVR+THIP+GIVV Q +
Sbjct: 210 ALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTHIPSGIVVASQTE 269
Query: 184 RSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSR-IKDL 242
RSQH+N+ A + WG QIRSYVL + +KD
Sbjct: 270 RSQHQNREIAMRILASKLLAVEIAKRAEERAKIKGERISAEWGNQIRSYVLHPYKMVKDH 329
Query: 243 RTNLETKNIKDILDGDLDNFIIASLKQHL 271
RT+ E N + +L+G+LD FI A L+Q++
Sbjct: 330 RTDYEVGNAEAVLEGELDGFINAYLRQNI 358
>TIGR_CMR|DET_0570 [details] [associations]
symbol:DET_0570 "peptide chain release factor 2,
programmed frameshift" species:243164 "Dehalococcoides ethenogenes
195" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG1186
GO:GO:0003747 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_181313.1 ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6
GeneID:3230122 KEGG:det:DET0570 PATRIC:21608209
ProtClustDB:CLSK837416 Uniprot:Q3Z8Y6
Length = 362
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 119/269 (44%), Positives = 168/269 (62%)
Query: 4 EIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCE 63
EIE N L +I +E F+ D N + + +GAGG+E+QDWA MLLR ++R+ E
Sbjct: 90 EIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTVHAGAGGVESQDWAGMLLRMFMRWAE 149
Query: 64 RKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSF 123
+KGF +E+L++S GE GIK+ TL+I+G+YAYGFLKSE G+HRL+R SPFD+ + RHTSF
Sbjct: 150 KKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSPFDADHARHTSF 209
Query: 124 SSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQND 183
+ + V PE P D++ID +R+SG GGQ++ K +AVR+THIP+GIVV Q +
Sbjct: 210 ALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTHIPSGIVVASQTE 269
Query: 184 RSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSR-IKDL 242
RSQH+N+ A + WG QIRSYVL + +KD
Sbjct: 270 RSQHQNREIAMRILASKLLAVEIAKRAEERAKIKGERISAEWGNQIRSYVLHPYKMVKDH 329
Query: 243 RTNLETKNIKDILDGDLDNFIIASLKQHL 271
RT+ E N + +L+G+LD FI A L+Q++
Sbjct: 330 RTDYEVGNAEAVLEGELDGFINAYLRQNI 358
>TAIR|locus:2010748 [details] [associations]
symbol:AT1G56350 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0048825
"cotyledon development" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:SAVRITY
IPI:IPI00540527 RefSeq:NP_176032.2 UniGene:At.42791
ProteinModelPortal:F4I532 SMR:F4I532 PRIDE:F4I532
EnsemblPlants:AT1G56350.1 GeneID:842089 KEGG:ath:AT1G56350
Uniprot:F4I532
Length = 482
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 116/261 (44%), Positives = 158/261 (60%)
Query: 14 NKIKEIE-FHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEIL 72
+K KE+E NDP +C+I++Q+GAGG E+ DWA+M++ Y + +R+ F V ++
Sbjct: 218 SKEKELEALLSADNDPC---SCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVV 274
Query: 73 EKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEX 132
+++ GEI GIK T+K+ G+YAYG+ K+E G+HRLVR SPFDS RHTSF+++ V P
Sbjct: 275 DEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPIL 334
Query: 133 XXXXXXXXX-PADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKS 191
+DLRI+ +R+ GAGGQH N TDSAVRI HIPTGI CQN+RSQH NK+
Sbjct: 335 GDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKA 394
Query: 192 EAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSR-IKDLRTNLETKN 250
A + WG QIR+YVL R +KDLRTN E +
Sbjct: 395 SAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSD 454
Query: 251 IKDILDGDLDNFIIASLKQHL 271
+L+GDLD FI++ L L
Sbjct: 455 PDSVLEGDLDGFILSFLSSSL 475
>TIGR_CMR|CHY_0163 [details] [associations]
symbol:CHY_0163 "peptide chain release factor 2,
programmed frameshift" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0003747 "translation release factor
activity" evidence=ISS] [GO:0006415 "translational termination"
evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR Gene3D:3.30.160.20
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_359035.1 ProteinModelPortal:Q3AFP9 STRING:Q3AFP9
GeneID:3727359 KEGG:chy:CHY_0163 PATRIC:21273511 Uniprot:Q3AFP9
Length = 371
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 114/267 (42%), Positives = 160/267 (59%)
Query: 4 EIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCE 63
E +D KL K+ +E + P D N+ + + +GAGG EAQDW ML R Y R+ E
Sbjct: 96 EAQDKAKKLMEKLHRMEIELLLSGPYDKNSAIVSLHAGAGGTEAQDWVEMLYRMYTRWAE 155
Query: 64 RKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSF 123
KG+ VE++++ GE G+K+VT ++G AYG+LK+E G+HRL+R SPFD S RHTSF
Sbjct: 156 DKGYKVELIDRLLGEEAGLKSVTFSVEGFGAYGYLKAERGVHRLIRISPFDFSGRRHTSF 215
Query: 124 SSLFVYPEXXXXX-XXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQN 182
+S+ V PE +L+I+T+R+ GAGGQH+NKT+SAVRITH+PTGI V CQN
Sbjct: 216 ASVDVLPEVAEDIPEIELKEEELKIETFRSGGAGGQHVNKTESAVRITHLPTGITVVCQN 275
Query: 183 DRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDK-SRIKD 241
+RSQ N++ A + WG QIR+YV S +KD
Sbjct: 276 ERSQLMNRALAEKLLKAKLLDLEMKKKEEEMAKLRGEQKEIAWGSQIRTYVFHPYSLVKD 335
Query: 242 LRTNLETKNIKDILDGDLDNFIIASLK 268
RT +E +++ ++DG++D FI A LK
Sbjct: 336 HRTGVEVGDVQGVMDGEIDIFIEAYLK 362
>TAIR|locus:2158936 [details] [associations]
symbol:HCF109 "high chlorophyll fluorescent 109"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006415 "translational termination"
evidence=IEA;ISS;IMP] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006396 "RNA processing" evidence=IMP] [GO:0009657 "plastid
organization" evidence=IMP] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 EMBL:CP002688 GO:GO:0009570
Gene3D:3.30.160.20 GO:GO:0006396 GO:GO:0009657 GO:GO:0006415
GO:GO:0016149 EMBL:AB018112 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 HSSP:P07012
UniGene:At.9505 EMBL:AY056234 EMBL:AY117253 EMBL:AY084711
IPI:IPI00546331 RefSeq:NP_851096.1 ProteinModelPortal:Q9LVY0
SMR:Q9LVY0 STRING:Q9LVY0 PRIDE:Q9LVY0 EnsemblPlants:AT5G36170.1
GeneID:833614 KEGG:ath:AT5G36170 TAIR:At5g36170 InParanoid:Q9LVY0
OMA:MGWGSQI PhylomeDB:Q9LVY0 ProtClustDB:CLSN2680355
ArrayExpress:Q9LVY0 Genevestigator:Q9LVY0 Uniprot:Q9LVY0
Length = 456
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 112/270 (41%), Positives = 154/270 (57%)
Query: 1 MLKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLR 60
+L+E +LN + + E Q + P D + I +GAGG +AQDWA MLLR Y+R
Sbjct: 174 LLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDWADMLLRMYMR 233
Query: 61 YCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRH 120
+ E++ + +++E SNGE GIK+ TL+I+G+YAYG++ E G HR+VR+SPF+S R
Sbjct: 234 WGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQ 293
Query: 121 TSFSSLFVYPEXXXXXXXXXXPA-DLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQ 179
TSFS + V P P DL I RA G GGQ++NK ++AVRITHIPTG+ V+
Sbjct: 294 TSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAVR 353
Query: 180 CQNDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSR- 238
C +RSQ NK+ A WG QIR+YV +
Sbjct: 354 CTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIRGDAVKAEWGQQIRNYVFHPYKL 413
Query: 239 IKDLRTNLETKNIKDILDGDLDNFIIASLK 268
+KD+RT ET +I ++DGDLD FI A LK
Sbjct: 414 VKDVRTGHETSDITSVMDGDLDPFIKAYLK 443
>DICTYBASE|DDB_G0288835 [details] [associations]
symbol:prfB "class I peptide chain release factor"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 dictyBase:DDB_G0288835
GO:GO:0005737 Gene3D:3.30.160.20 GenomeReviews:CM000154_GR
eggNOG:COG1186 EMBL:AAFI02000125 GO:GO:0016149
PANTHER:PTHR11075:SF6 RefSeq:XP_636549.1 ProteinModelPortal:Q54IC8
STRING:Q54IC8 EnsemblProtists:DDB0237485 GeneID:8626834
KEGG:ddi:DDB_G0288835 InParanoid:Q54IC8 OMA:LINESHN Uniprot:Q54IC8
Length = 424
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 111/271 (40%), Positives = 151/271 (55%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRY 61
LKE N+L + E+E N D C ++IQ+GAGG ++ DW +L Y ++
Sbjct: 153 LKETRSLINQLFSNCSELEVKALMNGKDDSKGCLLEIQAGAGGNDSMDWTKILFEMYCKW 212
Query: 62 CERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHT 121
RKG+ VEI++ ++GE G + +LKI G AYG+L++E GIHRL+R SPF SS RHT
Sbjct: 213 GARKGYNVEIIDTADGEF-GYRHASLKIDGHNAYGWLRTEMGIHRLIRISPFSSSGKRHT 271
Query: 122 SFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 181
SF+S+ VYP P DL +T R+SGAGGQH+NKT+SAVRI HIPTGI V
Sbjct: 272 SFASVVVYPISDDSIKINIDPKDLHFETLRSSGAGGQHVNKTESAVRIVHIPTGISVLSS 331
Query: 182 NDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQ--IRSYVLD-KSR 238
++RSQH+NKS + W +R+Y + + R
Sbjct: 332 SERSQHQNKSNGLLLLKSKLYSHELKKKIEAEKSFRDELGKNSWASDSVVRNYSMHPQER 391
Query: 239 IKDLRTNLETKNIKDILDGD--LDNFIIASL 267
+KD RT +E I ILDG+ LDN I +L
Sbjct: 392 VKDQRTGIEVLQISKILDGEEELDNMIKKAL 422
>UNIPROTKB|P66026 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.30.160.20 EMBL:BX842582
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 PIR:H70919 RefSeq:NP_217621.1 RefSeq:NP_337713.1
RefSeq:YP_006516568.1 ProteinModelPortal:P66026 SMR:P66026
EnsemblBacteria:EBMYCT00000000199 EnsemblBacteria:EBMYCT00000071451
GeneID:13317912 GeneID:888820 GeneID:926714 KEGG:mtc:MT3188
KEGG:mtu:Rv3105c KEGG:mtv:RVBD_3105c PATRIC:18128778
TubercuList:Rv3105c Uniprot:P66026
Length = 371
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 106/266 (39%), Positives = 144/266 (54%)
Query: 4 EIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCE 63
E + L I+ E + D + I+SGAGG++A DWA ML+R Y+R+ E
Sbjct: 99 EADAELKSLRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAADWAEMLMRMYIRWAE 158
Query: 64 RKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSF 123
+ + VE+ + S E GIK+ T + +AYG L E G HRLVR SPFD+ + R TSF
Sbjct: 159 QHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSF 218
Query: 124 SSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQND 183
+ + V P D+R+D YR+SG GGQ +N TDSAVR+THIP+GIVV CQN+
Sbjct: 219 AEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPSGIVVTCQNE 278
Query: 184 RSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSR-IKDL 242
+SQ +NK A + WG Q+RSYVL + +KDL
Sbjct: 279 KSQLQNKIAAMRVLQAKLLERKRLEERAELDALKADGGSS-WGNQMRSYVLHPYQMVKDL 337
Query: 243 RTNLETKNIKDILDGDLDNFIIASLK 268
RT E N +LDGDLD F+ A ++
Sbjct: 338 RTEYEVGNPAAVLDGDLDGFLEAGIR 363
>TIGR_CMR|CPS_3552 [details] [associations]
symbol:CPS_3552 "peptide chain release factor 1"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 OMA:EMPEINP
TIGRFAMs:TIGR00019 RefSeq:YP_270226.1 ProteinModelPortal:Q47Y94
SMR:Q47Y94 STRING:Q47Y94 GeneID:3522324 KEGG:cps:CPS_3552
PATRIC:21470035 BioCyc:CPSY167879:GI48-3580-MONOMER Uniprot:Q47Y94
Length = 362
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 96/258 (37%), Positives = 143/258 (55%)
Query: 3 KEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYC 62
+E +D + + E++ DP D NNCF++I++GAGG EA +A L R Y RY
Sbjct: 82 EEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIRAGAGGDEAAIFAGDLFRMYSRYA 141
Query: 63 ERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTS 122
E+KG+ +E++ + E G K + +K+ G+ +G +K ESG HR+ R +S HTS
Sbjct: 142 EKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMKFESGGHRVQRVPATESQGRVHTS 201
Query: 123 FSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQN 182
++ V PE ADL++DT+RASGAGGQH+NKTDSA+RITHIPTG+VV+CQ
Sbjct: 202 ACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQE 261
Query: 183 DRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIKD 241
RSQH+N+++A + +IR+Y + R+ D
Sbjct: 262 QRSQHKNRAQAMSVLQARLQQAEDEKRRSEEESSRRNLVASGDRSERIRTYNFPQGRMSD 321
Query: 242 LRTNLETKNIKDILDGDL 259
R NL + +I++G L
Sbjct: 322 HRINLTLYRLNEIMEGSL 339
>TIGR_CMR|SO_3833 [details] [associations]
symbol:SO_3833 "peptide chain release factor 1"
species:211586 "Shewanella oneidensis MR-1" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:GEAGGYK ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:NP_719366.1 ProteinModelPortal:Q8EAR3
SMR:Q8EAR3 GeneID:1171478 KEGG:son:SO_3833 PATRIC:23527352
Uniprot:Q8EAR3
Length = 363
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 99/269 (36%), Positives = 148/269 (55%)
Query: 3 KEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYC 62
+EI+ +L E++ DP D N FI+I++GAGG EA +A L R Y RY
Sbjct: 82 EEIKAAKVELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAIFAGDLFRMYSRYA 141
Query: 63 ERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTS 122
E + +EI+ + GE G K + +K+ G+ AYG LK ESG HR+ R +S HTS
Sbjct: 142 EANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQRVPETESQGRVHTS 201
Query: 123 FSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQN 182
++ V E PADL++DT+R+SGAGGQH+NKTDSA+RITHIPTGIVV+CQ+
Sbjct: 202 AVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQD 261
Query: 183 DRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIKD 241
RSQH+N+++A + ++R+Y + R+ +
Sbjct: 262 QRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNFPQGRVSE 321
Query: 242 LRTNLETKNIKDILDGDLDNFIIASLKQH 270
R NL + ++++GDLD + +++H
Sbjct: 322 HRINLTLYRLNEVMEGDLDAILGPLMQEH 350
>UNIPROTKB|Q9KQ25 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 94/250 (37%), Positives = 142/250 (56%)
Query: 27 DPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTVT 86
DP D NCF++I++GAGG EA +A L R Y R+ E+KG+ +E++ S E G K +
Sbjct: 106 DPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMI 165
Query: 87 LKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADLR 146
K+ G AYG LK ESG HR+ R ++ HTS ++ V PE +DL+
Sbjct: 166 AKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLK 225
Query: 147 IDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWD-MXXXXXXXXX 205
IDT+R+SGAGGQH+N TDSA+RITH+PTGIVV+CQ++RSQH+NK++A +
Sbjct: 226 IDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEE 285
Query: 206 XXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIKDLRTNLETKNIKDILDGDLDNFIIA 265
+IR+Y + R+ D R NL + ++++GD+ + I
Sbjct: 286 SKRAAEISDTRRNLLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIDP 345
Query: 266 SLKQHLLNKI 275
+ +H +++
Sbjct: 346 VIHEHQADQL 355
>TIGR_CMR|VC_2179 [details] [associations]
symbol:VC_2179 "peptide chain release factor 1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 94/250 (37%), Positives = 142/250 (56%)
Query: 27 DPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTVT 86
DP D NCF++I++GAGG EA +A L R Y R+ E+KG+ +E++ S E G K +
Sbjct: 106 DPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMI 165
Query: 87 LKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADLR 146
K+ G AYG LK ESG HR+ R ++ HTS ++ V PE +DL+
Sbjct: 166 AKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLK 225
Query: 147 IDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWD-MXXXXXXXXX 205
IDT+R+SGAGGQH+N TDSA+RITH+PTGIVV+CQ++RSQH+NK++A +
Sbjct: 226 IDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEE 285
Query: 206 XXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIKDLRTNLETKNIKDILDGDLDNFIIA 265
+IR+Y + R+ D R NL + ++++GD+ + I
Sbjct: 286 SKRAAEISDTRRNLLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIDP 345
Query: 266 SLKQHLLNKI 275
+ +H +++
Sbjct: 346 VIHEHQADQL 355
>TIGR_CMR|CBU_1965 [details] [associations]
symbol:CBU_1965 "peptide chain release factor 1"
species:227377 "Coxiella burnetii RSA 493" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0016149 EMBL:X78969 eggNOG:COG0216 HOGENOM:HOG000074815
KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
PIR:A61648 RefSeq:NP_820940.1 ProteinModelPortal:P47849 SMR:P47849
PRIDE:P47849 GeneID:1209878 KEGG:cbu:CBU_1965 PATRIC:17932673
BioCyc:CBUR227377:GJ7S-1939-MONOMER Uniprot:P47849
Length = 361
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 101/263 (38%), Positives = 143/263 (54%)
Query: 3 KEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYC 62
+E+E T K +++ DP D N F++I++G GG EA +A L R Y RY
Sbjct: 82 EELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRAGTGGNEAAIFAGDLFRMYARYA 141
Query: 63 ERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNR-HT 121
E KG+ V I+ GE G K V ++ G+ Y LK ESG HR V++ P S R HT
Sbjct: 142 ETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHR-VQRVPVTESQGRIHT 200
Query: 122 SFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 181
S ++ + PE PA+LRIDT+RASGAGGQH+N+TDSA+RITH+PTG+VV+CQ
Sbjct: 201 SACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIRITHLPTGVVVECQ 260
Query: 182 NDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WGYQIRSYVLDKSRIK 240
++RSQH+NK+ A + +IR+Y + R+
Sbjct: 261 DERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSLVGSGDRSERIRTYNFPQGRVT 320
Query: 241 DLRTNLETKNIKDILDGDLDNFI 263
D R NL + ++++GDLD I
Sbjct: 321 DHRINLTLYQLDEVIEGDLDPVI 343
>UNIPROTKB|P0A7I0 [details] [associations]
symbol:prfA "peptide chain release factor RF1"
species:83333 "Escherichia coli K-12" [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA;IDA] [GO:0006415
"translational termination" evidence=IEA;IMP] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
Gene3D:3.30.160.20 GO:GO:0043022 GO:GO:0016149 EMBL:M25323
EMBL:U18555 EMBL:D28567 PDB:2B3T PDBsum:2B3T eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 EMBL:M11519 PIR:H64867 RefSeq:NP_415729.1
RefSeq:YP_489478.1 ProteinModelPortal:P0A7I0 SMR:P0A7I0
DIP:DIP-35936N IntAct:P0A7I0 MINT:MINT-1219241 PaxDb:P0A7I0
PRIDE:P0A7I0 EnsemblBacteria:EBESCT00000004821
EnsemblBacteria:EBESCT00000015260 GeneID:12931113 GeneID:949002
KEGG:ecj:Y75_p1183 KEGG:eco:b1211 PATRIC:32117674 EchoBASE:EB0754
EcoGene:EG10761 BioCyc:EcoCyc:EG10761-MONOMER
BioCyc:ECOL316407:JW1202-MONOMER EvolutionaryTrace:P0A7I0
Genevestigator:P0A7I0 Uniprot:P0A7I0
Length = 360
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 100/275 (36%), Positives = 151/275 (54%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRY 61
L+E ++ + +L +++ + + DP D N F+++++G GG EA +A L R Y RY
Sbjct: 82 LREAKEKSEQLEQQLQVLLLPK---DPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRY 138
Query: 62 CERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHT 121
E + + VEI+ S GE G K + KI G YG LK ESG HR+ R +S HT
Sbjct: 139 AEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHT 198
Query: 122 SFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 181
S ++ V PE PADLRIDT+R+SGAGGQH+N TDSA+RITH+PTGIVV+CQ
Sbjct: 199 SACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQ 258
Query: 182 NDRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIK 240
++RSQH+NK++A + + R+Y + R+
Sbjct: 259 DERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVT 318
Query: 241 DLRTNLETKNIKDILDGDLDNFIIASLKQHLLNKI 275
D R NL + ++++G LD I +++H +++
Sbjct: 319 DHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQL 353
>TIGR_CMR|CHY_2563 [details] [associations]
symbol:CHY_2563 "peptide chain release factor 1"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0
OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
RefSeq:YP_361356.1 ProteinModelPortal:Q3A928 SMR:Q3A928
STRING:Q3A928 GeneID:3727190 KEGG:chy:CHY_2563 PATRIC:21278175
BioCyc:CHYD246194:GJCN-2562-MONOMER Uniprot:Q3A928
Length = 358
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 99/265 (37%), Positives = 143/265 (53%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRY 61
L ++++ +L K+K + + DP D N ++I++GAGG EA +A L R Y +Y
Sbjct: 81 LHDLKERREELEAKLKILLLPK---DPNDEKNVIMEIRAGAGGEEAALFAGDLFRMYSKY 137
Query: 62 CERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHT 121
+R G+ VEI++ ++ G K V I+GK Y +K ESG+HR+ R +S HT
Sbjct: 138 ADRMGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESGVHRVQRVPTTESGGRIHT 197
Query: 122 SFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 181
S +++ V PE P DLRID + ASGAGGQH+NKT+SAVRITHIPTGIVV CQ
Sbjct: 198 STATVAVLPEAEEVEVEIN-PNDLRIDVFCASGAGGQHVNKTESAVRITHIPTGIVVTCQ 256
Query: 182 NDRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIK 240
+++SQH+NK A + +IR+Y ++R+
Sbjct: 257 DEKSQHKNKERAMKILRARLLDKARQEQEAELASARKSQVGTGDRSERIRTYNFPQNRVT 316
Query: 241 DLRTNLETKNIKDILDGDLDNFIIA 265
D R L + +L+GDLD I A
Sbjct: 317 DHRIGLTLHRLDAVLEGDLDEIIDA 341
>TIGR_CMR|APH_0420 [details] [associations]
symbol:APH_0420 "peptide chain release factor 1"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 RefSeq:YP_505023.1
ProteinModelPortal:Q2GKS8 STRING:Q2GKS8 GeneID:3929978
KEGG:aph:APH_0420 PATRIC:20949454 OMA:EMPEINP ProtClustDB:PRK00591
BioCyc:APHA212042:GHPM-447-MONOMER TIGRFAMs:TIGR00019
Uniprot:Q2GKS8
Length = 359
Score = 362 (132.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 83/184 (45%), Positives = 110/184 (59%)
Query: 11 KLNNKIK-EIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIV 69
KL K++ E++ D D N ++I++G GG EA + L R YL+Y ERK + V
Sbjct: 88 KLLPKLRHELQLSLLPKDRDDSRNAILEIRAGTGGEEAALFVGNLYRMYLKYAERKNWKV 147
Query: 70 EILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVY 129
E + S I G K + I GK + LK ESG+HR+ R +SS HTS +++ V
Sbjct: 148 ETINISTTGIGGYKEASFSIGGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVL 207
Query: 130 PEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRN 189
PE DLRID YR+SG GGQ +N TDSAVRITHIPTGIVV Q+++SQH+N
Sbjct: 208 PEVEEVDLKIDEK-DLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKN 266
Query: 190 KSEA 193
KS+A
Sbjct: 267 KSKA 270
Score = 75 (31.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDIL-DGDLDNFIIASLKQHLLNKI 275
+IR+Y +SRI D R NL + + ++ +GDLD FI A + NK+
Sbjct: 306 RIRTYNFLQSRITDHRINLTSYRLDYVMKEGDLDEFIDALVADDQANKL 354
>TIGR_CMR|GSU_3104 [details] [associations]
symbol:GSU_3104 "peptide chain release factor 1"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 OMA:SVMLEIR RefSeq:NP_954145.1
ProteinModelPortal:Q748B1 SMR:Q748B1 GeneID:2688463
KEGG:gsu:GSU3104 PATRIC:22029063
BioCyc:GSUL243231:GH27-3086-MONOMER Uniprot:Q748B1
Length = 355
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 95/270 (35%), Positives = 144/270 (53%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRY 61
L+E+E +L +IK + + DP D N ++I++G GG E+ +A L R Y R+
Sbjct: 78 LEELEQRQEELEGEIKLLLLPR---DPNDDRNVILEIRAGTGGDESALFAGDLFRMYSRF 134
Query: 62 CERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHT 121
ER + VE++ S E G K + I+G+ + LK ESG HR+ R ++ HT
Sbjct: 135 AERNRWKVEVMSASESERGGFKEIVALIEGQGVFAKLKYESGTHRVQRVPETEAQGRIHT 194
Query: 122 SFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 181
S ++ V PE PADL+ID YRASGAGGQH+NKT+SAVRITHIPTGIVV+CQ
Sbjct: 195 SACTVAVLPEAEDIEVDIN-PADLKIDVYRASGAGGQHVNKTESAVRITHIPTGIVVECQ 253
Query: 182 NDRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIK 240
++RSQ +N+++A + +IR+Y + R+
Sbjct: 254 DERSQIKNRAKAMKVLKTKILDGLHQEQNARIAADRKQQVGSGDRSERIRTYNFPQGRMT 313
Query: 241 DLRTNLETKNIKDILDGDLDNFIIASLKQH 270
D R L + +++GD+ ++ +L+ H
Sbjct: 314 DHRIGLTLYRLDSLMEGDIAE-VVDALRTH 342
>TIGR_CMR|ECH_0597 [details] [associations]
symbol:ECH_0597 "peptide chain release factor 1"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:YP_507408.1
ProteinModelPortal:Q2GGM5 SMR:Q2GGM5 STRING:Q2GGM5 GeneID:3927422
KEGG:ech:ECH_0597 PATRIC:20576648
BioCyc:ECHA205920:GJNR-599-MONOMER Uniprot:Q2GGM5
Length = 359
Score = 339 (124.4 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 76/180 (42%), Positives = 109/180 (60%)
Query: 15 KIK-EIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILE 73
K+K +++ D D N ++I++G GG EA + + L R Y +Y E+K + E +
Sbjct: 92 KVKHKLKLSLLPKDKDDARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQIN 151
Query: 74 KSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXX 133
S+ I G K ++L I G + LK ESG+HR+ R ++S HTS +++ V PE
Sbjct: 152 SSSTGIGGHKEISLCISGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIE 211
Query: 134 XXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
DLRID YR+SG GGQ +N TDSAVRITHIP+GIVV Q+++SQH+NKS+A
Sbjct: 212 EVDLKIDEK-DLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKA 270
Score = 85 (35.0 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDIL-DGDLDNFIIASLKQHLLNKITKN 278
+IR+Y +SRI D R NL + DI+ +G+LD FI A + + NK+ KN
Sbjct: 306 RIRTYNFPQSRITDHRINLTLYRLDDIMKEGNLDEFIEALIAEDEANKL-KN 356
>UNIPROTKB|P66016 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842576 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 PIR:G70773 RefSeq:NP_215815.1 RefSeq:NP_335786.1
RefSeq:YP_006514676.1 ProteinModelPortal:P66016 SMR:P66016
PRIDE:P66016 EnsemblBacteria:EBMYCT00000003633
EnsemblBacteria:EBMYCT00000071350 GeneID:13319881 GeneID:886948
GeneID:924722 KEGG:mtc:MT1338 KEGG:mtu:Rv1299 KEGG:mtv:RVBD_1299
PATRIC:18124710 TubercuList:Rv1299 OMA:VEIHAND Uniprot:P66016
Length = 357
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 91/241 (37%), Positives = 132/241 (54%)
Query: 27 DPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTVT 86
DP D ++ ++++SG GG E+ +A+ L R Y+RY ER G+ V +L+++ ++ G K T
Sbjct: 100 DPHDADDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDAT 159
Query: 87 LKIKGKY-----AYGFLKSESGIHRLVRKSPFDSSNNR-HTSFSSLFVYPEXXXXXXXXX 140
L I K + +K E G+HR V++ P S R HTS + + VYPE
Sbjct: 160 LAIASKADTPDGVWSRMKFEGGVHR-VQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQI 218
Query: 141 XPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWD-MXXX 199
+DLRID +R+SG GGQ +N TDSAVRITH+PTGIVV CQN+RSQ +NK+ A +
Sbjct: 219 DESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAAR 278
Query: 200 XXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIKDLRTNLETKNIKDILDGDL 259
+IR+Y ++RI D R ++ N+ +LDGDL
Sbjct: 279 LQAMAEEQALADASADRASQIRTVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDL 338
Query: 260 D 260
D
Sbjct: 339 D 339
>TIGR_CMR|CJE_1784 [details] [associations]
symbol:CJE_1784 "peptide chain release factor 1"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_179756.1 ProteinModelPortal:Q5HSH9
SMR:Q5HSH9 STRING:Q5HSH9 GeneID:3232411 KEGG:cjr:CJE1784
PATRIC:20045378 BioCyc:CJEJ195099:GJC0-1814-MONOMER Uniprot:Q5HSH9
Length = 355
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 98/271 (36%), Positives = 137/271 (50%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRY 61
LK +E+ KL +IK + + DP D N F++I++GAGG EA + L++ Y RY
Sbjct: 79 LKTLEELKPKLEEEIKILLLPK---DPNDERNIFLEIRAGAGGDEASLFVGDLVKAYARY 135
Query: 62 CERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHT 121
E +G+ +EI+ S G + G K + + +KG AY LK E G HR+ R +S HT
Sbjct: 136 AENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVPQTESQGRVHT 195
Query: 122 SFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 181
S ++ V PE P DL++D R+SG GGQ +N TDSAVRITHIPTGIVV Q
Sbjct: 196 SAITVAVMPEVDDIEIEIN-PNDLKVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQ 254
Query: 182 NDRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIK 240
+ +SQH+NK A + +IR+Y ++RI
Sbjct: 255 DGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRSERIRTYNFPQNRIS 314
Query: 241 DLRTNLETKNIKDIL-DGDLDNFIIASLKQH 270
D R NL + I+ DG D I + H
Sbjct: 315 DHRINLTLYRLDAIMQDGLFDEIIEPLITHH 345
>TIGR_CMR|SPO_2461 [details] [associations]
symbol:SPO_2461 "peptide chain release factor 1"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
HSSP:P0A7I0 ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_167678.1 ProteinModelPortal:Q5LQM7 GeneID:3194030
KEGG:sil:SPO2461 PATRIC:23378321 Uniprot:Q5LQM7
Length = 351
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 90/240 (37%), Positives = 126/240 (52%)
Query: 27 DPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTVT 86
D D ++I+ G GG EA +A LLR Y RY E +G+ +E++E E+ GIK V
Sbjct: 99 DAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWKLELIELQETELGGIKEVV 158
Query: 87 LKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADLR 146
+I G+ + LK ESG+HR+ R +S HTS +++ V PE P D+R
Sbjct: 159 ARISGENVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAQDVDIQID-PGDIR 217
Query: 147 IDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWD-MXXXXXXXXX 205
IDT R+SGAGGQH+N TDSAVRITH+P+GIVV +++SQHRN+ A +
Sbjct: 218 IDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHRNREIAMQVLKTRLYDLER 276
Query: 206 XXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIKDLRTNLETKNIKDILDGDLDNFIIA 265
+IR+Y + R+ D R NL + ++ GDLD I A
Sbjct: 277 QRLDRERSASRSAQVGTGDRSERIRTYNFPQGRMTDHRINLTLYKLDAVMQGDLDEVIDA 336
>TAIR|locus:2041409 [details] [associations]
symbol:AT2G47020 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006415
"translational termination" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.30.160.20 GO:GO:0016149
KO:K02835 OMA:EMPEINP TIGRFAMs:TIGR00019 EMBL:BT030058
IPI:IPI00517548 RefSeq:NP_182225.3 UniGene:At.43988
ProteinModelPortal:A2RVR7 SMR:A2RVR7 PRIDE:A2RVR7
EnsemblPlants:AT2G47020.1 GeneID:819316 KEGG:ath:AT2G47020
TAIR:At2g47020 PhylomeDB:A2RVR7 Genevestigator:Q3E6W0
Uniprot:A2RVR7
Length = 413
Score = 339 (124.4 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 70/168 (41%), Positives = 105/168 (62%)
Query: 27 DPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTVT 86
D D +C +++++G GG EA +A + R Y RY ++KG+ +I++ + ++ G K +
Sbjct: 157 DEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEAS 216
Query: 87 LKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNR-HTSFSSLFVYPEXXXXXXXXXXPADL 145
I G YG LK ESGIHR V++ P + R HTS S+ + P+ DL
Sbjct: 217 AAICGASVYGKLKFESGIHR-VQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNE-DL 274
Query: 146 RIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
RIDTYR+ G+GGQH N T+SAVRI H+PTG++V Q++RSQH N+++A
Sbjct: 275 RIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKA 322
Score = 62 (26.9 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDILDGD-LDNFIIASLKQHLLNKI 275
+IR+Y + R+ D R + I+D++ G+ LD FI A L + ++ I
Sbjct: 358 RIRTYNFPQGRVTDHRVGITHHAIEDMMQGENLDMFIDALLLRQEMDAI 406
>TIGR_CMR|BA_5572 [details] [associations]
symbol:BA_5572 "peptide chain release factor 1"
species:198094 "Bacillus anthracis str. Ames" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:NP_847729.1
RefSeq:YP_022240.1 RefSeq:YP_031417.1 ProteinModelPortal:Q81JX1
SMR:Q81JX1 DNASU:1085262 EnsemblBacteria:EBBACT00000012375
EnsemblBacteria:EBBACT00000014683 EnsemblBacteria:EBBACT00000022198
GeneID:1085262 GeneID:2819896 GeneID:2852042 KEGG:ban:BA_5572
KEGG:bar:GBAA_5572 KEGG:bat:BAS5178
BioCyc:BANT260799:GJAJ-5253-MONOMER
BioCyc:BANT261594:GJ7F-5432-MONOMER Uniprot:Q81JX1
Length = 355
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 90/265 (33%), Positives = 136/265 (51%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRY 61
+ E+E L+ ++K + + DP D N ++++ AGG EA +A L R Y RY
Sbjct: 81 VSELESQEKTLSERLKILLVPK---DPNDDKNVIVEVRGAAGGDEAALFAGDLYRMYSRY 137
Query: 62 CERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHT 121
E +G+ EI+E S E+ G K + I GK A+ LK E+G HR+ R +S HT
Sbjct: 138 AEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQRVPETESGGRIHT 197
Query: 122 SFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 181
S +++ V PE D+R+DT+ +SG GGQ +N T SAVR+TH+PTG+VV CQ
Sbjct: 198 STATVAVLPEAEEVEIDIHEK-DVRVDTFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQ 256
Query: 182 NDRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIK 240
+++SQ +NK +A + +IR+Y ++R+
Sbjct: 257 DEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTGDRSERIRTYNFPQNRVT 316
Query: 241 DLRTNLETKNIKDILDGDLDNFIIA 265
D R L + + IL G LD+FI A
Sbjct: 317 DHRIGLTIQKLDQILQGKLDDFINA 341
>DICTYBASE|DDB_G0283175 [details] [associations]
symbol:prfA "peptide chain release factor 1"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
dictyBase:DDB_G0283175 GO:GO:0005737 GenomeReviews:CM000153_GR
Gene3D:3.30.160.20 EMBL:AAFI02000051 GO:GO:0016149 eggNOG:COG0216
KO:K02835 RefSeq:XP_639198.1 ProteinModelPortal:Q54RE7
STRING:Q54RE7 EnsemblProtists:DDB0237484 GeneID:8623973
KEGG:ddi:DDB_G0283175 InParanoid:Q54RE7 OMA:HAAICIN
ProtClustDB:CLSZ2430394 Uniprot:Q54RE7
Length = 430
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 93/267 (34%), Positives = 140/267 (52%)
Query: 5 IEDNTNKLNNK-IKEIEFHQFFN----DPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYL 59
I+ + NKL + I+ +E F+ D + ++I++G GG EAQ + + Y
Sbjct: 150 IKSDINKLKQEEIEPLEKQLLFSLLPGSKDDAGDAILEIRAGTGGSEAQLFTQDVYEMYR 209
Query: 60 RYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNR 119
YC +KG+ E LE S E+ G + VT+ + GK +GFLK ESG+HR V++ P + R
Sbjct: 210 SYCLQKGWTFEPLELSVTEVGGYRDVTVSVSGKGVFGFLKYESGVHR-VQRVPLTETQGR 268
Query: 120 -HTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVV 178
HTS ++ + PE DL++D YR+SG GGQ +N TDSAVRITH+PTGI V
Sbjct: 269 IHTSTITVAILPEPKDVDIQIHD-RDLKVDIYRSSGNGGQSVNTTDSAVRITHLPTGITV 327
Query: 179 QCQNDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXW-GYQIRSYVLDKS 237
Q++RSQH+N+S+A + +IR+Y +
Sbjct: 328 AMQDERSQHQNRSKAMKILKARIYERERIRLQNERVSERNAQIGSALRSERIRTYNYPQD 387
Query: 238 RIKDLRTNLETKNIKDILDGD-LDNFI 263
RI D R ++ N+ ++ D LD+FI
Sbjct: 388 RITDHRVSING-NLNSCMNSDGLDSFI 413
>TIGR_CMR|NSE_0406 [details] [associations]
symbol:NSE_0406 "peptide chain release factor 1"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_506293.1 ProteinModelPortal:Q2GE03 SMR:Q2GE03
STRING:Q2GE03 GeneID:3931950 KEGG:nse:NSE_0406 PATRIC:22680869
ProtClustDB:CLSK2527657 BioCyc:NSEN222891:GHFU-429-MONOMER
Uniprot:Q2GE03
Length = 367
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 94/271 (34%), Positives = 141/271 (52%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRY 61
L+ I+D KL +IK + + +D L N +++++G GG EA +A+ L Y +Y
Sbjct: 84 LQAIQDVIPKLELEIKRMLLPKDKDDAL---NVMLEVRAGTGGDEAALFAASLFHMYQKY 140
Query: 62 CERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHT 121
ER + EI+ S+ EI G K I G + LK ESG+HR+ R +S+ HT
Sbjct: 141 AERMKWRFEIISISHNEIGGYKEANASISGSDVFAKLKFESGVHRVQRVPETESAGRIHT 200
Query: 122 SFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 181
S +++ V PE DLRID YR+SG GGQ +N TDSAVRITHIPTGIVV Q
Sbjct: 201 STATVAVLPEPEDVDVKINDK-DLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQ 259
Query: 182 NDRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIK 240
+++SQH+N+++A + + R+Y + RI
Sbjct: 260 DEKSQHKNRAKAMKVLRVRLYEIERNKVQQEISSMRKSQIGSGERSEKTRTYNFPQGRIT 319
Query: 241 DLRTNLETKNIKD-ILDGDLDNFIIASLKQH 270
D R NL T I + + +G+L+ I A ++++
Sbjct: 320 DHRINLTTYRINETVKEGELEPIIEALIREN 350
>UNIPROTKB|Q9UGC7 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005739 EMBL:CH471051 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:AL080276 CTD:54516 eggNOG:COG0216
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 EMBL:AK027684
EMBL:AK095240 EMBL:AK290662 EMBL:BC011873 EMBL:BC014428
EMBL:BC105973 IPI:IPI00295737 IPI:IPI00477207 IPI:IPI00513970
IPI:IPI00890825 RefSeq:NP_001107656.1 RefSeq:NP_061914.3
UniGene:Hs.225836 HSSP:Q9X183 ProteinModelPortal:Q9UGC7 SMR:Q9UGC7
STRING:Q9UGC7 PhosphoSite:Q9UGC7 DMDM:74753314 PRIDE:Q9UGC7
DNASU:54516 Ensembl:ENST00000367230 Ensembl:ENST00000367231
Ensembl:ENST00000367233 Ensembl:ENST00000414771 GeneID:54516
KEGG:hsa:54516 UCSC:uc003qpi.4 UCSC:uc003qpk.4 UCSC:uc003qpl.4
GeneCards:GC06M153308 H-InvDB:HIX0006308 HGNC:HGNC:21051
HPA:HPA036367 MIM:613542 neXtProt:NX_Q9UGC7 PharmGKB:PA134870441
InParanoid:Q9UGC7 OMA:YSMKLEE PhylomeDB:Q9UGC7 GenomeRNAi:54516
NextBio:56904 ArrayExpress:Q9UGC7 Bgee:Q9UGC7 CleanEx:HS_MTRF1L
Genevestigator:Q9UGC7 Uniprot:Q9UGC7
Length = 380
Score = 320 (117.7 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 74/198 (37%), Positives = 110/198 (55%)
Query: 2 LKEIEDNTNKLNNK-IKEIEFHQFF-----NDPLDFNNCFIDIQSGAGGIEAQDWASMLL 55
L+++ +N L K I +++ HQ ++ D N+ +++ +G GG EA + S +
Sbjct: 92 LRKLAENEITLCQKEITQLK-HQIILLLVPSEETDENDLILEVTAGVGGQEAMLFTSEIF 150
Query: 56 RQYLRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDS 115
Y +Y K + E LE E+ G++ + I G AY +K E G+HR+ R +
Sbjct: 151 DMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEK 210
Query: 116 SNNRHTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 175
HTS ++ + P+ P DLRIDT RASGAGGQH+N TDSAVRI H+PTG
Sbjct: 211 QGRVHTSTMTVAILPQPTEINLVIN-PKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTG 269
Query: 176 IVVQCQNDRSQHRNKSEA 193
+V +CQ +RSQ +NK A
Sbjct: 270 VVSECQQERSQLKNKELA 287
Score = 59 (25.8 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDILDGD--LDNFIIASLKQH 270
+IR+Y ++R+ D R N +++ + GD LD ++ SLK++
Sbjct: 323 KIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDE-LVQSLKEY 366
>UNIPROTKB|E1BXF8 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016149 "translation release factor activity, codon
specific" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:VWLFRHP EMBL:AADN02005497 IPI:IPI00591431
Ensembl:ENSGALT00000027399 Uniprot:E1BXF8
Length = 417
Score = 301 (111.0 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 74/198 (37%), Positives = 103/198 (52%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFF-NDPLDFNNCFIDIQSG--AGGIEAQDWASMLLRQY 58
L+E E K+N +++ F + D ++ +++ +G GG Q + + Y
Sbjct: 122 LEEKETLDKKINTLCRKL-FQLLVPKEKYDKSHVILEVTAGRTTGGDICQQFTKEMFEMY 180
Query: 59 LRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVR--KSPFDSS 116
Y + K + +IL EI G+ I G Y LK E G HR+ R ++ S
Sbjct: 181 QNYADYKCWTFDILNYVPAEIGGLHHAAAHISGDDVYRHLKYEGGTHRVQRIPETGLSSR 240
Query: 117 NNR-HTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 175
R HT S+ V P+ P DLRIDT+RA GAGGQH+NKTDSAVRI H+PTG
Sbjct: 241 MQRIHTGTMSVIVLPQPEEVDVKVD-PKDLRIDTFRAKGAGGQHVNKTDSAVRIVHLPTG 299
Query: 176 IVVQCQNDRSQHRNKSEA 193
+VV+CQ +RSQ NK A
Sbjct: 300 VVVECQQERSQQMNKEIA 317
Score = 69 (29.3 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDILDG--DLDNFI 263
+IR+Y + R+ D R + + +NIK+IL G +LD I
Sbjct: 353 RIRTYNFTQDRVTDHRISYDARNIKEILSGKEELDKLI 390
>TIGR_CMR|DET_1210 [details] [associations]
symbol:DET_1210 "peptide chain release factor 1"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_181923.1 ProteinModelPortal:Q3Z776
STRING:Q3Z776 GeneID:3229489 KEGG:det:DET1210 PATRIC:21609455
OMA:SVMLEIR BioCyc:DETH243164:GJNF-1211-MONOMER Uniprot:Q3Z776
Length = 355
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 84/253 (33%), Positives = 134/253 (52%)
Query: 27 DPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGI-KTV 85
DP D + ++I++G GG EA +A+ L + Y RY K + E+++ NG + GI K V
Sbjct: 103 DPNDDKSIIMEIRAGTGGDEAGLFAADLYKMYTRYALLKNWKTEVID-INGNVAGIIKEV 161
Query: 86 TLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADL 145
++ GK A+ LK E G+HR+ R ++S HTS +++ V P+ D+
Sbjct: 162 VFEVNGKGAFSRLKYERGVHRVQRVPQTEASGRIHTSTATVAVLPQVEEVDIDINMD-DV 220
Query: 146 RIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWD-MXXXXXXXX 204
R+D + +SGAGGQ++ K +A+R+THIPTG+VV CQ++RSQ +NK++A+ +
Sbjct: 221 RVDIFHSSGAGGQNVQKVATAIRLTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELE 280
Query: 205 XXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIKDLRTNLETKNIKDILDGDLDNFII 264
+IR+Y + R+ D R L N+ IL+G LD II
Sbjct: 281 QSKVDEERTESRRAQVGQADRSEKIRTYNFPQDRLTDHRIGLTAHNLPHILEGYLDE-II 339
Query: 265 ASLKQHLLNKITK 277
+L H ++ K
Sbjct: 340 DTLATHEQTELLK 352
>UNIPROTKB|Q3MHI7 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 GeneTree:ENSGT00390000011879
EMBL:BC105224 IPI:IPI00698094 RefSeq:NP_001030185.1
UniGene:Bt.37767 HSSP:P0A7I0 ProteinModelPortal:Q3MHI7
STRING:Q3MHI7 PRIDE:Q3MHI7 Ensembl:ENSBTAT00000016261 GeneID:504754
KEGG:bta:504754 CTD:9617 InParanoid:Q3MHI7 OMA:VWLFRHP
OrthoDB:EOG48KRBQ NextBio:20866812 Uniprot:Q3MHI7
Length = 447
Score = 296 (109.3 bits), Expect = 6.8e-31, Sum P(2) = 6.8e-31
Identities = 74/198 (37%), Positives = 101/198 (51%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFF-NDPLDFNNCFIDIQSG--AGGIEAQDWASMLLRQY 58
L+E + K+N E+ F + D N+ +++ SG GG Q + + Y
Sbjct: 155 LEERQTIAQKINMLYSEL-FQSLLPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMY 213
Query: 59 LRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVR--KSPFDSS 116
Y K + E+L + + G+ +I G Y LK E GIHR+ R + S
Sbjct: 214 QNYSSYKHWRFELLNYTPADYGGLHHAAARISGDNVYKHLKYEGGIHRVQRIPEVGLSSR 273
Query: 117 NNR-HTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 175
R HT S+ V P P DLRIDT+RA GAGGQH+N TDSAVR+ HIPTG
Sbjct: 274 MQRIHTGTMSVIVLPHPDEVDVKVD-PKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTG 332
Query: 176 IVVQCQNDRSQHRNKSEA 193
+VV+CQ +RSQ +NK A
Sbjct: 333 LVVECQQERSQIKNKEIA 350
Score = 62 (26.9 bits), Expect = 6.8e-31, Sum P(2) = 6.8e-31
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDILDGD--LDNFI 263
+IR+Y + R+ D R E +NIK+ L G+ LD I
Sbjct: 386 RIRTYNFTQDRVTDHRIAYEVRNIKEFLCGEKCLDQLI 423
>UNIPROTKB|F1MCM1 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 IPI:IPI00714066 UniGene:Bt.20306
GeneTree:ENSGT00390000011879 OMA:VEIHAND EMBL:DAAA02027199
Ensembl:ENSBTAT00000012219 Uniprot:F1MCM1
Length = 380
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 87/276 (31%), Positives = 133/276 (48%)
Query: 3 KEIEDNTNKLNNKIKEIEFHQFF-----NDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQ 57
K E+ +I +++ HQ ++ D N+ +++ +G GG EA + S +
Sbjct: 94 KLAENEITSCEKEIAQLK-HQIILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEIFDM 152
Query: 58 YLRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSN 117
Y +Y K + E LE EI G++ + I G AY +K E G+HR+ R +
Sbjct: 153 YQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGSEAYKHMKFEGGVHRVQRVPKTEKQG 212
Query: 118 NRHTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIV 177
HTS ++ + P+ P DLRIDT RASGAGGQH+N TDSAVRI H+PTGIV
Sbjct: 213 RIHTSTMTVAILPQPTEINLVIN-PKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIV 271
Query: 178 VQCQNDRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDK 236
+CQ +RSQ +NK A + +IR+Y +
Sbjct: 272 SECQQERSQLKNKEMAMKKLRAKLYSLQLEEETSKRYNARKIQIGTKGRSEKIRTYNFPQ 331
Query: 237 SRIKDLRTNLETKNIKDILDGD--LDNFIIASLKQH 270
+R+ D R N +++ + G+ LD ++ SLK +
Sbjct: 332 NRVTDHRINKSLHDLETFMQGEYLLDE-LVQSLKDY 366
>UNIPROTKB|Q2KI15 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:BC112806 IPI:IPI00714066 RefSeq:NP_001039843.1
UniGene:Bt.20306 ProteinModelPortal:Q2KI15 STRING:Q2KI15
PRIDE:Q2KI15 GeneID:534354 KEGG:bta:534354 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 InParanoid:Q2KI15 KO:K02835
OrthoDB:EOG49W2G0 NextBio:20876372 Uniprot:Q2KI15
Length = 380
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 87/276 (31%), Positives = 133/276 (48%)
Query: 3 KEIEDNTNKLNNKIKEIEFHQFF-----NDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQ 57
K E+ +I +++ HQ ++ D N+ +++ +G GG EA + S +
Sbjct: 94 KLAENEITSCEKEIAQLK-HQIILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEIFDM 152
Query: 58 YLRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSN 117
Y +Y K + E LE EI G++ + I G AY +K E G+HR+ R +
Sbjct: 153 YQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGSEAYKHMKFEGGVHRVQRVPKTEKQG 212
Query: 118 NRHTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIV 177
HTS ++ + P+ P DLRIDT RASGAGGQH+N TDSAVRI H+PTGIV
Sbjct: 213 RIHTSTMTVAILPQPTEINLVIN-PKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIV 271
Query: 178 VQCQNDRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDK 236
+CQ +RSQ +NK A + +IR+Y +
Sbjct: 272 SECQQERSQLKNKEMAMKKLRAKLYSLQLEEETSKRYNARKIQIGTKGRSEKIRTYNFPQ 331
Query: 237 SRIKDLRTNLETKNIKDILDGD--LDNFIIASLKQH 270
+R+ D R N +++ + G+ LD ++ SLK +
Sbjct: 332 NRVTDHRINKSLHDLETFMQGEYLLDE-LVQSLKDY 366
>UNIPROTKB|F1RJ87 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:CU062515
RefSeq:NP_001230509.1 UniGene:Ssc.41357 Ensembl:ENSSSCT00000010343
GeneID:100155739 KEGG:ssc:100155739 Uniprot:F1RJ87
Length = 446
Score = 295 (108.9 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 73/198 (36%), Positives = 101/198 (51%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFF-NDPLDFNNCFIDIQSG--AGGIEAQDWASMLLRQY 58
L+E K+N E+ F + D N+ +++ SG GG Q + + Y
Sbjct: 154 LEEKRTIAQKINMLYHEL-FQSLVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMY 212
Query: 59 LRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVR--KSPFDSS 116
Y K + E+L + + G+ +I G Y LK E GIHR+ R + S
Sbjct: 213 QNYSSYKHWTFELLNYTPADYGGLHHAAARISGANVYKHLKYEGGIHRVQRIPEVGLSSR 272
Query: 117 NNR-HTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 175
R HT S+ V P+ P DLRIDT+RA GAGGQH+N TDSAVR+ H+PTG
Sbjct: 273 MQRIHTGTMSVIVLPQPDEVDVKVD-PKDLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTG 331
Query: 176 IVVQCQNDRSQHRNKSEA 193
+VV+CQ +RSQ +NK A
Sbjct: 332 LVVECQQERSQIKNKEIA 349
Score = 60 (26.2 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDILDGD--LDNFIIASLKQ 269
+IR+Y + R+ D R E +NIK+ L G+ LD +I L Q
Sbjct: 385 RIRTYNFTQDRVTDHRIAYEVRNIKEFLCGEKCLD-LLIQRLLQ 427
>UNIPROTKB|F1S7X5 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:GEAGGYK EMBL:CU633523 Ensembl:ENSSSCT00000004505 Uniprot:F1S7X5
Length = 380
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 81/248 (32%), Positives = 123/248 (49%)
Query: 26 NDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTV 85
++ D N+ +++ +G GG EA + S + Y +Y K + EILE EI G++
Sbjct: 121 SEEADENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHA 180
Query: 86 TLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADL 145
+ I G AY +K E G+HR+ R + HTS ++ + P+ P DL
Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVIN-PKDL 239
Query: 146 RIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWD-MXXXXXXXX 204
RIDT RASGAGGQH+N TDSAVRI H+PTG+V +CQ +RSQ +N+ A +
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLH 299
Query: 205 XXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIKDLRTNLETKNIKDILDGD--LDNF 262
+IR+Y ++R+ D R N ++ + G+ LD
Sbjct: 300 LEEETSKRYNARKVQVGTKGRSEKIRTYNFPQNRVTDHRINKSLYDLGTFMQGEYLLDE- 358
Query: 263 IIASLKQH 270
++ SLK +
Sbjct: 359 LVQSLKDY 366
>MGI|MGI:1918830 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 MGI:MGI:1918830 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 CTD:54516 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 HSSP:Q9X183
EMBL:AK036424 EMBL:AK078897 IPI:IPI00222491 RefSeq:NP_780583.1
UniGene:Mm.55082 ProteinModelPortal:Q8BJU9 SMR:Q8BJU9 STRING:Q8BJU9
PhosphoSite:Q8BJU9 PRIDE:Q8BJU9 Ensembl:ENSMUST00000019908
GeneID:108853 KEGG:mmu:108853 UCSC:uc007egi.1
GeneTree:ENSGT00390000011879 InParanoid:Q8BJU9 OMA:GEAGGYK
NextBio:361387 Bgee:Q8BJU9 Genevestigator:Q8BJU9 Uniprot:Q8BJU9
Length = 373
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 87/276 (31%), Positives = 138/276 (50%)
Query: 2 LKEIEDNTNKLNNK-IKEIEFHQFFN-----DPLDFNNCFIDIQSGAGGIEAQDWASMLL 55
LK++ ++ L K I E++ HQ + + +D ++ +++ +G GG EA + S +
Sbjct: 85 LKKLAESEIALCQKQITELK-HQIISLLVPSEEMDGSDLILEVTAGVGGQEAMLFTSEMF 143
Query: 56 RQYLRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDS 115
Y +Y K + E LE E+ G++ + + G AY +K E G+HR+ R +
Sbjct: 144 DMYQQYAAFKRWHFETLEYFPSELGGLRHASASVGGPEAYRHMKFEGGVHRVQRVPKTEK 203
Query: 116 SNNRHTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 175
HTS ++ + P+ P DLRIDT RASGAGGQH+N TDSAVRI H+PTG
Sbjct: 204 QGRIHTSTMTVAILPQPTEIKLVIN-PKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTG 262
Query: 176 IVVQCQNDRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVL 234
I+ +CQ +RSQ +N+ A + +IR+Y
Sbjct: 263 IISECQQERSQLKNRELAMKKLRARLYSMHLEEETAKRYNARKIQVGTKGRSEKIRTYNF 322
Query: 235 DKSRIKDLRTNLETKNIKDILDGD--LDNFIIASLK 268
++R+ D R N +++ + GD LD+ +I SLK
Sbjct: 323 PQNRVTDHRINKSLHDLESFMQGDCLLDD-MIQSLK 357
>RGD|1598312 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 RGD:1598312 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0
HSSP:Q9X183 GeneTree:ENSGT00390000011879 OMA:GEAGGYK EMBL:BC097970
IPI:IPI00365406 RefSeq:NP_001020894.1 UniGene:Rn.205194
ProteinModelPortal:Q4V7E5 STRING:Q4V7E5 PRIDE:Q4V7E5
Ensembl:ENSRNOT00000025398 GeneID:361473 KEGG:rno:361473
UCSC:RGD:1598312 InParanoid:Q4V7E5 NextBio:676427
Genevestigator:Q4V7E5 Uniprot:Q4V7E5
Length = 373
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 80/248 (32%), Positives = 125/248 (50%)
Query: 26 NDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTV 85
++ +D ++ +++ +G GG EA + S + Y +Y K + E LE E+ G++
Sbjct: 114 SEDMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 173
Query: 86 TLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADL 145
+ I G AY +K E G+HR+ R + HTS ++ + P+ P DL
Sbjct: 174 SASIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTEIKLVIN-PKDL 232
Query: 146 RIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWD-MXXXXXXXX 204
RIDT RASGAGGQH+N TDSAVRI H+PTGI+ +CQ +RSQ +N+ A +
Sbjct: 233 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMR 292
Query: 205 XXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIKDLRTNLETKNIKDILDGD--LDNF 262
+IR+Y ++R+ D R N +++ + GD LD+
Sbjct: 293 LEEETAKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLESFMQGDCLLDD- 351
Query: 263 IIASLKQH 270
+I SLK +
Sbjct: 352 LIQSLKDY 359
>ZFIN|ZDB-GENE-030131-8198 [details] [associations]
symbol:mtrf1l "mitochondrial translational release
factor 1-like" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA] [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 ZFIN:ZDB-GENE-030131-8198 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
EMBL:CU651596 IPI:IPI00802409 Ensembl:ENSDART00000084094
Uniprot:F1QA94
Length = 339
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 74/238 (31%), Positives = 116/238 (48%)
Query: 30 DFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTVTLKI 89
D + +++ +G GG EA + + + Y Y G+ ++LE + E+ G++ + +
Sbjct: 84 DMSELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASASV 143
Query: 90 KGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADLRIDT 149
G +Y LK E+G+HR+ R +S HTS ++ + P+ P DL+I+T
Sbjct: 144 SGPLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTEISFTIN-PKDLKIET 202
Query: 150 YRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWDMXXXXXXXXXXXXX 209
RASGAGGQH+N TDSAVRITH+PTG V +CQ +RSQ +NK A +
Sbjct: 203 KRASGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSARLEEE 262
Query: 210 XXXXXXXXXXXXXXXW-GYQIRSYVLDKSRIKDLRTNLETKNIKDILDGD--LDNFII 264
+IR+Y + RI D R ++ L G+ L+ I+
Sbjct: 263 TSRRYQARKLQIGTRGRSEKIRTYNFQQDRITDHRIGKTVHDVHGFLQGEELLEEMIV 320
>UNIPROTKB|E2RAT2 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:AAEX03013173
RefSeq:XP_848713.1 ProteinModelPortal:E2RAT2
Ensembl:ENSCAFT00000007724 GeneID:485465 KEGG:cfa:485465
NextBio:20859471 Uniprot:E2RAT2
Length = 444
Score = 296 (109.3 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 73/198 (36%), Positives = 102/198 (51%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFF-NDPLDFNNCFIDIQSG--AGGIEAQDWASMLLRQY 58
L+E + K+N E+ F + D N+ I++ SG GG Q + + Y
Sbjct: 152 LEERQTIAEKINVLYSEL-FQSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFTREIFDMY 210
Query: 59 LRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVR--KSPFDSS 116
Y K + E+L + + G+ +I G Y LK E G+HR+ R + +
Sbjct: 211 QNYSSYKNWKFELLNYTPADYGGLHHAAARISGDNVYKHLKYEGGVHRVQRIPEVGLSAR 270
Query: 117 NNR-HTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 175
R HT S+ V P+ P DLRIDT+RA GAGGQH+N TDSAVR+ HIPTG
Sbjct: 271 MQRIHTGTMSVIVLPQPDEVDVKVD-PKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTG 329
Query: 176 IVVQCQNDRSQHRNKSEA 193
+VV+CQ +RSQ +NK A
Sbjct: 330 LVVECQQERSQIKNKEIA 347
Score = 56 (24.8 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDILDGD--LDNFI 263
+IR+Y + R+ D R E + IK+ L G+ LD I
Sbjct: 383 RIRTYNFTQDRVTDHRIAYEVRGIKEFLCGEKCLDQLI 420
>POMBASE|SPAC2F7.17 [details] [associations]
symbol:SPAC2F7.17 "mitochondrial peptide chain release
factor (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=NAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 PomBase:SPAC2F7.17 GO:GO:0005739
EMBL:CU329670 Gene3D:3.30.160.20 GO:GO:0032543 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
PIR:S58161 RefSeq:NP_592987.1 ProteinModelPortal:Q09691
STRING:Q09691 EnsemblFungi:SPAC2F7.17.1 GeneID:2541478
KEGG:spo:SPAC2F7.17 OMA:QEANSIL OrthoDB:EOG4JWZP5 NextBio:20802577
Uniprot:Q09691
Length = 396
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 81/268 (30%), Positives = 137/268 (51%)
Query: 4 EIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCE 63
EI + +NK+ I+++E I+I+ G GG EA +A+ L+ Y +Y
Sbjct: 114 EINEISNKIPKSIEDLENTLLPQADSYALPALIEIRPGVGGTEAAIFANELVEMYFQYAN 173
Query: 64 RKGFIVEILEKSNGEITGIKTVT---LKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNR- 119
KG+ + + KS + G++ +T I+G+ AYG L E G+HR V+++P + R
Sbjct: 174 FKGWNCKFISKS--AVQGLEAITEAIFSIEGEGAYGHLMLEGGVHR-VQRTPATETKGRV 230
Query: 120 HTSFSSLFVYPEXXXXXXXXXXPA-DLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVV 178
HTS +S+ V P+ + +++I+ R+ GAGGQH+N+T+SAVR+THIPTGI V
Sbjct: 231 HTSTASVIVLPQVSNDESSSLYDSSEVKIEVMRSRGAGGQHVNRTESAVRLTHIPTGITV 290
Query: 179 QCQNDRSQHRNKSEAW-DMXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKS 237
Q+ RSQH+NK +A+ + ++R+Y +++
Sbjct: 291 SMQDSRSQHQNKEKAFLVLNSRLAALNAAKENEAERLKRKNQVTSSDRSEKLRTYNFNQN 350
Query: 238 RIKDLRTNLETKNIKDILDGD--LDNFI 263
R+ D R L ++ + G+ D F+
Sbjct: 351 RVTDHRIGLSMHDLSTFMQGEEKFDEFL 378
>UNIPROTKB|O75570 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=TAS] [GO:0006449 "regulation of
translational termination" evidence=TAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0006449 GO:GO:0016149 EMBL:AL354696
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
CTD:9617 OrthoDB:EOG48KRBQ EMBL:AF072934 EMBL:BC042196
IPI:IPI00026157 RefSeq:NP_004285.2 UniGene:Hs.382176
ProteinModelPortal:O75570 SMR:O75570 IntAct:O75570 STRING:O75570
PhosphoSite:O75570 PRIDE:O75570 Ensembl:ENST00000379477
Ensembl:ENST00000379480 Ensembl:ENST00000452359 GeneID:9617
KEGG:hsa:9617 UCSC:uc001uxx.3 GeneCards:GC13M041790 HGNC:HGNC:7469
HPA:HPA043316 MIM:604601 neXtProt:NX_O75570 PharmGKB:PA31273
InParanoid:O75570 PhylomeDB:O75570 GenomeRNAi:9617 NextBio:36079
ArrayExpress:O75570 Bgee:O75570 CleanEx:HS_MTRF1
Genevestigator:O75570 GermOnline:ENSG00000120662 Uniprot:O75570
Length = 445
Score = 295 (108.9 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 74/199 (37%), Positives = 104/199 (52%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFF-NDPLDFNNCFIDIQSG--AGGIEAQDWASMLLRQY 58
L+E + K+N E+ F + D N+ +++ +G GG Q + + Y
Sbjct: 153 LEERQTIDQKINMLYNEL-FQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMY 211
Query: 59 LRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVR--KSPFDSS 116
Y K + E+L + + G+ +I G Y LK E GIHR+ R + S
Sbjct: 212 QNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSR 271
Query: 117 NNR-HTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 175
R HT S+ V P+ P DLRIDT+RA GAGGQH+NKTDSAVR+ HIPTG
Sbjct: 272 MQRIHTGTMSVIVLPQPDEVDVKLD-PKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTG 330
Query: 176 IVVQCQNDRSQHRNKSEAW 194
+VV+CQ +RSQ +NK A+
Sbjct: 331 LVVECQQERSQIKNKEIAF 349
Score = 55 (24.4 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDILDGD--LDNFI 263
+IR+Y + R+ D R E ++IK+ L G LD I
Sbjct: 384 RIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKGLDQLI 421
>UNIPROTKB|F1NW58 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 OMA:YSMKLEE
GeneTree:ENSGT00390000011879 EMBL:AADN02025387 EMBL:AADN02025388
IPI:IPI00593690 Ensembl:ENSGALT00000022140 Uniprot:F1NW58
Length = 367
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 70/171 (40%), Positives = 98/171 (57%)
Query: 26 NDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTV 85
++ D ++ +++ +G GG EA + S + Y RY K + EILE EI G++
Sbjct: 107 SEETDNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHA 166
Query: 86 TLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADL 145
I G AY ++K E G+HR+ R + HTS ++ + P+ P DL
Sbjct: 167 VASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEMELKIN-PKDL 225
Query: 146 RIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWDM 196
RI+T RASGAGGQH+N TDSAVRI HIPTG+ +CQ +RSQ RNK +A M
Sbjct: 226 RIETKRASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQIRNKEKAMQM 276
>UNIPROTKB|E2QTM1 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
Ensembl:ENSCAFT00000000841 Uniprot:E2QTM1
Length = 381
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 79/248 (31%), Positives = 122/248 (49%)
Query: 26 NDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTV 85
++ D N+ +++ +G GG EA + S + Y +Y K + E LE EI G++
Sbjct: 122 SEETDKNDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 181
Query: 86 TLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADL 145
+ I G AY +K E G+HR+ R + HTS ++ + P+ P DL
Sbjct: 182 SASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVIN-PKDL 240
Query: 146 RIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWD-MXXXXXXXX 204
RI T RASGAGGQH+N TDSAVRI H+PTG+V +CQ +RSQ +N+ A +
Sbjct: 241 RIHTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMY 300
Query: 205 XXXXXXXXXXXXXXXXXXXXWGYQIRSYVLDKSRIKDLRTNLETKNIKDILDGD--LDNF 262
+IR+Y ++R+ D R N +++ + G+ LD
Sbjct: 301 LEEETSKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDE- 359
Query: 263 IIASLKQH 270
++ SLK +
Sbjct: 360 LVQSLKDY 367
>TAIR|locus:2099137 [details] [associations]
symbol:APG3 "AT3G62910" species:3702 "Arabidopsis
thaliana" [GO:0003747 "translation release factor activity"
evidence=IGI;ISS] [GO:0006415 "translational termination"
evidence=IGI;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009658 "chloroplast organization" evidence=IMP;NAS]
[GO:0010027 "thylakoid membrane organization" evidence=RCA;IMP]
[GO:0032544 "plastid translation" evidence=IGI] [GO:0006783 "heme
biosynthetic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
process" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:3.30.160.20
GO:GO:0009658 GO:GO:0010027 GO:GO:0003747 GO:GO:0032544
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
TIGRFAMs:TIGR00019 OMA:SVMLEIR HSSP:P07012 EMBL:AY090253
EMBL:AY125535 EMBL:AB109893 IPI:IPI00529197 RefSeq:NP_191850.2
UniGene:At.28015 ProteinModelPortal:Q8RX79 SMR:Q8RX79 STRING:Q8RX79
PaxDb:Q8RX79 PRIDE:Q8RX79 EnsemblPlants:AT3G62910.1 GeneID:825466
KEGG:ath:AT3G62910 TAIR:At3g62910 InParanoid:Q8RX79
PhylomeDB:Q8RX79 ProtClustDB:CLSN2690621 Genevestigator:Q8RX79
Uniprot:Q8RX79
Length = 422
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 66/193 (34%), Positives = 108/193 (55%)
Query: 4 EIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCE 63
EI T ++ K+++ +DPLD N +++++G GG EA W L+R Y RY E
Sbjct: 137 EINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRMYQRYSE 196
Query: 64 RKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSF 123
R + ++ S E G KT ++IKG Y LK ESG+HR+ R ++ HTS
Sbjct: 197 RSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTST 256
Query: 124 SSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQND 183
+++ + PE P D+ + + R+ GAGGQ++NK ++A+ + H P+GI + C +
Sbjct: 257 ATVAIMPEADEVEVVID-PKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIRIFCTEE 315
Query: 184 RSQHRNKSEAWDM 196
R+Q RNK+ A+ +
Sbjct: 316 RTQIRNKARAFQL 328
>MGI|MGI:2384815 [details] [associations]
symbol:Mtrf1 "mitochondrial translational release factor 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006415 "translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
MGI:MGI:2384815 GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP OrthoDB:EOG48KRBQ
EMBL:AK043981 EMBL:BC028898 IPI:IPI00169629 RefSeq:NP_666072.3
UniGene:Mm.35306 ProteinModelPortal:Q8K126 SMR:Q8K126 STRING:Q8K126
PhosphoSite:Q8K126 PRIDE:Q8K126 Ensembl:ENSMUST00000022600
GeneID:211253 KEGG:mmu:211253 UCSC:uc007usw.1 InParanoid:Q8K126
NextBio:373184 Bgee:Q8K126 CleanEx:MM_MTRF1 Genevestigator:Q8K126
GermOnline:ENSMUSG00000022022 Uniprot:Q8K126
Length = 446
Score = 285 (105.4 bits), Expect = 4.3e-29, Sum P(2) = 4.3e-29
Identities = 66/169 (39%), Positives = 92/169 (54%)
Query: 30 DFNNCFIDIQSG--AGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTVTL 87
D+++ +++ SG GG Q + + Y Y K + E+L + + G+
Sbjct: 182 DWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAA 241
Query: 88 KIKGKYAYGFLKSESGIHRLVR--KSPFDSSNNR-HTSFSSLFVYPEXXXXXXXXXXPAD 144
+I G Y LK E GIHR+ R + S R HT S+ V P+ P D
Sbjct: 242 RISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVD-PKD 300
Query: 145 LRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
LR+DT+RA GAGGQH+N TDSAVR+ HIPTG+VV+CQ +RSQ +NK A
Sbjct: 301 LRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIA 349
Score = 58 (25.5 bits), Expect = 4.3e-29, Sum P(2) = 4.3e-29
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDILDGD--LDNFI 263
+IR+Y + R+ D R E ++IK+ L G+ LD I
Sbjct: 385 RIRTYNFTQDRVTDHRIAYEVRDIKEFLRGEKCLDQLI 422
>SGD|S000003111 [details] [associations]
symbol:MRF1 "Mitochondrial translation release factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA;IMP] [GO:0070126 "mitochondrial translational
termination" evidence=IGI;IMP] [GO:0006415 "translational
termination" evidence=IEA;IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0032543 "mitochondrial translation" evidence=IMP]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 SGD:S000003111 InterPro:IPR014720
GO:GO:0005739 EMBL:BK006941 Gene3D:3.30.160.20 GO:GO:0003747
EMBL:X99960 GO:GO:0016149 RefSeq:NP_011376.3 GeneID:852738
KEGG:sce:YGL139W EMBL:X60381 GO:GO:0070126 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 GeneTree:ENSGT00390000011879
OrthoDB:EOG4JWZP5 EMBL:Z72665 PIR:S28602 RefSeq:NP_011372.3
ProteinModelPortal:P30775 SMR:P30775 DIP:DIP-2626N IntAct:P30775
MINT:MINT-427494 STRING:P30775 PaxDb:P30775 EnsemblFungi:YGL143C
GeneID:852734 KEGG:sce:YGL143C CYGD:YGL143c OMA:PPHPFAD
NextBio:972135 Genevestigator:P30775 GermOnline:YGL143C
Uniprot:P30775
Length = 413
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 84/278 (30%), Positives = 137/278 (49%)
Query: 1 MLKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLR 60
++ + E +++L NK+ + H F + P ++++ G GGIEA + LL Y+
Sbjct: 129 LVPQYETTSSRLVNKL--LPPHPFADKP-----SLLELRPGVGGIEAMIFTQNLLDMYIG 181
Query: 61 YCERKGFIVEILEKSNGEI-TGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNR 119
Y + + I+ K+ E +GI L I+ +Y L+ E+G+HR+ R ++
Sbjct: 182 YANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEAGVHRVQRIPSTETKGRT 241
Query: 120 HTSFSSLFVYPEXXXXXXXXXX-------PADLRIDTYRASGAGGQHINKTDSAVRITHI 172
HTS +++ V P+ P ++R+D RASG GGQH+N TDSAVR+THI
Sbjct: 242 HTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGKGGQHVNTTDSAVRLTHI 301
Query: 173 PTGIVVQCQNDRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQIRS 231
P+GIVV Q++RSQH+NK++A+ + +IR+
Sbjct: 302 PSGIVVSMQDERSQHKNKAKAFTILRARLAEKERLEKEEKERKARKSQVSSTNRSDKIRT 361
Query: 232 YVLDKSRIKDLRTNLETKNIKDILDGD-LDNFIIASLK 268
Y ++RI D R ++ +L G+ LD I A K
Sbjct: 362 YNFPQNRITDHRCGFTLLDLPGVLSGERLDEVIEAMSK 399
>UNIPROTKB|B4DG01 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
EMBL:AL354696 HOGENOM:HOG000074815 HOVERGEN:HBG017071 OMA:VWLFRHP
UniGene:Hs.382176 HGNC:HGNC:7469 EMBL:AK294343 IPI:IPI00909024
SMR:B4DG01 STRING:B4DG01 Ensembl:ENST00000430347 UCSC:uc010tff.2
Uniprot:B4DG01
Length = 468
Score = 295 (108.9 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 74/199 (37%), Positives = 104/199 (52%)
Query: 2 LKEIEDNTNKLNNKIKEIEFHQFF-NDPLDFNNCFIDIQSG--AGGIEAQDWASMLLRQY 58
L+E + K+N E+ F + D N+ +++ +G GG Q + + Y
Sbjct: 166 LEERQTIDQKINMLYNEL-FQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMY 224
Query: 59 LRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVR--KSPFDSS 116
Y K + E+L + + G+ +I G Y LK E GIHR+ R + S
Sbjct: 225 QNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSR 284
Query: 117 NNR-HTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 175
R HT S+ V P+ P DLRIDT+RA GAGGQH+NKTDSAVR+ HIPTG
Sbjct: 285 MQRIHTGTMSVIVLPQPDEVDVKLD-PKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTG 343
Query: 176 IVVQCQNDRSQHRNKSEAW 194
+VV+CQ +RSQ +NK A+
Sbjct: 344 LVVECQQERSQIKNKEIAF 362
Score = 44 (20.5 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIK 252
+IR+Y + R+ D R E ++IK
Sbjct: 397 RIRTYNFTQDRVSDHRIAYEVRDIK 421
>ASPGD|ASPL0000035902 [details] [associations]
symbol:AN3462 species:162425 "Emericella nidulans"
[GO:0070126 "mitochondrial translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:BN001306 GO:GO:0016149 HOGENOM:HOG000074815
OMA:QCQAGNA EnsemblFungi:CADANIAT00009571 Uniprot:C8VHA3
Length = 418
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 65/179 (36%), Positives = 101/179 (56%)
Query: 33 NCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEI--LEKSNGEITGIKTVTLKIK 90
+C ++I+ GAGG EA +A LL+ Y+ +C +G + LE+ + + L+++
Sbjct: 143 SCLLEIRPGAGGDEASIFAFELLQMYVAFCAHQGLRSTLMKLERGDNRADALTEAVLEVE 202
Query: 91 GKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXX--------- 141
+ AY L++ESG+HR+ R ++ HTS S+ V P
Sbjct: 203 AEGAYDLLRTESGVHRVQRVPTTEAKGRTHTSAVSVMVLPSFPDTGGGDGAFNFDDPNSD 262
Query: 142 ----PADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWDM 196
P ++R + RASGAGGQH+NKT+SA+R+TH+PTGIVV Q+ RSQH N+ +AW +
Sbjct: 263 YYIDPQEVRTEKMRASGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQI 321
Score = 208 (78.3 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 43/120 (35%), Positives = 64/120 (53%)
Query: 142 PADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWDMXXXXX 201
P ++R + RASGAGGQH+NKT+SA+R+TH+PTGIVV Q+ RSQH N+ +AW +
Sbjct: 267 PQEVRTEKMRASGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKL 326
Query: 202 XXXXXXXXXXXXXXXXXXXXXXXW----GYQIRSYVLDKSRIKDLRTNLETKNIKDILDG 257
G ++R+Y +SR D R+ N+ ++L+G
Sbjct: 327 AEARQEAREQELVELRRGAMGGIGRMGRGDKVRTYNYGQSRCTDHRSGFTVHNLDNVLEG 386
>CGD|CAL0003702 [details] [associations]
symbol:orf19.1303 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0070126 "mitochondrial
translational termination" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 CGD:CAL0003702 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 EMBL:AACQ01000138
HOGENOM:HOG000074815 KO:K02835 RefSeq:XP_709944.1
ProteinModelPortal:Q59TR5 STRING:Q59TR5 GeneID:3645356
KEGG:cal:CaO19.1303 Uniprot:Q59TR5
Length = 394
Score = 266 (98.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 58/168 (34%), Positives = 90/168 (53%)
Query: 34 CFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKY 93
C I+++ G GG EA + LL Y+ + + +I+ + I L I
Sbjct: 150 CIIELRPGVGGNEASLFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLG 209
Query: 94 AYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXX-------XPADLR 146
+Y ++ ESG+HR+ R ++ HTS +++ V P+ P ++R
Sbjct: 210 SYDIMRHESGVHRVQRIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVR 269
Query: 147 IDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAW 194
IDT RA G GGQH+N TDSAVR+ HIPTG++V Q++RSQ NK++A+
Sbjct: 270 IDTMRAGGKGGQHVNTTDSAVRLLHIPTGMIVIQQDERSQPLNKAKAF 317
Score = 47 (21.6 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDILDG 257
+I++Y ++R+ D R N +++ +L+G
Sbjct: 352 KIKTYNYKENRVTDHRINYSMHDLEGVLEG 381
>FB|FBgn0032486 [details] [associations]
symbol:CG5705 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=ISS]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE014134 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
KO:K02835 GeneTree:ENSGT00390000011879 HSSP:P07012 EMBL:AY061245
RefSeq:NP_609617.1 UniGene:Dm.3674 SMR:Q9VK20 IntAct:Q9VK20
MINT:MINT-821247 STRING:Q9VK20 EnsemblMetazoa:FBtr0080444
GeneID:34720 KEGG:dme:Dmel_CG5705 UCSC:CG5705-RA
FlyBase:FBgn0032486 InParanoid:Q9VK20 OMA:AEKDEDM OrthoDB:EOG46WWQX
GenomeRNAi:34720 NextBio:789875 Uniprot:Q9VK20
Length = 392
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 64/168 (38%), Positives = 96/168 (57%)
Query: 26 NDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTV 85
+D ++ + +GAGG EA +A L Y Y E G+ E +I G++
Sbjct: 123 SDDEEYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHA 182
Query: 86 TLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADL 145
+L + G+ A+ +L+ E+G+HR+ R + S HTS +S+ V P DL
Sbjct: 183 SLMVSGEDAFRWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIPRPADIQVHIAEK-DL 241
Query: 146 RIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
+I+T RASGAGGQH+N TDSAVRI H+PTG+ V+ Q++RSQ +N+ A
Sbjct: 242 KIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELA 289
>UNIPROTKB|F6V8L3 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
GO:GO:0016149 GeneTree:ENSGT00390000011879
Ensembl:ENSCAFT00000000841 EMBL:AAEX03000279 OMA:DCTISIS
Uniprot:F6V8L3
Length = 238
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 72/224 (32%), Positives = 108/224 (48%)
Query: 50 WASMLLRQYLRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVR 109
+ S + Y +Y K + E LE EI G++ + I G AY +K E G+HR+ R
Sbjct: 3 FTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGLEAYKHMKFEGGVHRVQR 62
Query: 110 KSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRI 169
+ HTS ++ + P+ P DLRI T RASGAGGQH+N TDSAVRI
Sbjct: 63 VPKTEKQGRIHTSTMTVAILPQPTEINLVIN-PKDLRIHTKRASGAGGQHVNTTDSAVRI 121
Query: 170 THIPTGIVVQCQNDRSQHRNKSEAWD-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGYQ 228
H+PTG+V +CQ +RSQ +N+ A + +
Sbjct: 122 VHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYLEEETSKRYSARKIQVGTKGRSEK 181
Query: 229 IRSYVLDKSRIKDLRTNLETKNIKDILDGD--LDNFIIASLKQH 270
IR+Y ++R+ D R N +++ + G+ LD ++ SLK +
Sbjct: 182 IRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDE-LVQSLKDY 224
>WB|WBGene00020993 [details] [associations]
symbol:W03F8.3 species:6239 "Caenorhabditis elegans"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
GeneTree:ENSGT00390000011879 EMBL:FO080652 PIR:T15102
RefSeq:NP_500737.1 ProteinModelPortal:O44568 SMR:O44568
STRING:O44568 PaxDb:O44568 EnsemblMetazoa:W03F8.3.1
EnsemblMetazoa:W03F8.3.2 GeneID:177294 KEGG:cel:CELE_W03F8.3
UCSC:W03F8.3 CTD:177294 WormBase:W03F8.3 InParanoid:O44568
OMA:QCQAGNA NextBio:896154 Uniprot:O44568
Length = 389
Score = 256 (95.2 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 61/188 (32%), Positives = 102/188 (54%)
Query: 4 EIEDNTNKLNNKIKEIEFHQFFNDPLD-FNNCFIDIQSGAGGIEAQDWASMLLRQYLRYC 62
++E L +++E+ + LD + C I++ GAGG EA + LL Y +
Sbjct: 107 DVESIEENLETELQELAVKIVPLNNLDVLSKCQIELSCGAGGQEAMLFTGELLDMYQKLA 166
Query: 63 ERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTS 122
+ + L+ N + G+++ + + G+ Y ++ E+G+HR V++ P + S HTS
Sbjct: 167 AVNSWKWDPLQVDNVPLGGVRSALIAVSGEKVYAKMRFEAGVHR-VQRVPVNDSR-MHTS 224
Query: 123 FSSLFVYPEXXXXXXXXXXPAD-LRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 181
+S+ V PE P+D ++I+ RASG GGQ++NK +AVR+TH TGI V C
Sbjct: 225 TASISVLPEPEEVSVVV--PSDSVKIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCM 282
Query: 182 NDRSQHRN 189
++R QH N
Sbjct: 283 DERFQHLN 290
Score = 46 (21.3 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDILD-GDLDNFIIASLK-QHLLNKI 275
+IR+Y R+ D R + + + L G+ +I L+ QHL +++
Sbjct: 330 KIRTYNFQHDRVTDHRIQMSITGVAEFLSAGETLQTMIERLQEQHLEDRL 379
>ZFIN|ZDB-GENE-050220-8 [details] [associations]
symbol:zgc:113104 "zgc:113104" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 ZFIN:ZDB-GENE-050220-8
GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149 HOGENOM:HOG000074815
KO:K02835 EMBL:BC090173 IPI:IPI00484442 RefSeq:NP_001012512.1
UniGene:Dr.77520 ProteinModelPortal:Q5EB09 GeneID:503530
KEGG:dre:503530 InParanoid:Q5EB09 NextBio:20866191 Uniprot:Q5EB09
Length = 235
Score = 238 (88.8 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 52/139 (37%), Positives = 77/139 (55%)
Query: 58 YLRYCERKGFIVEILEKSNGEITGIKTVTLKIKGKYAYGFLKSESGIHRLVR--KSPFDS 115
Y + K + E+ + E G+ ++++ G+ + +LK E G HR+ R + S
Sbjct: 5 YQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEVGLSS 64
Query: 116 SNNR-HTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 174
R HT ++ V P+ P DLRIDT+R+ GAGGQH+N TDSAVR+ H+PT
Sbjct: 65 RMQRIHTGTMTVIVLPQMEEVDIDIA-PKDLRIDTFRSRGAGGQHVNTTDSAVRLVHLPT 123
Query: 175 GIVVQCQNDRSQHRNKSEA 193
G V +CQ RSQ +N+ A
Sbjct: 124 GTVSECQQFRSQLKNRETA 142
Score = 52 (23.4 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 228 QIRSYVLDKSRIKDLRTNLETKNIKDILDG 257
+IR+Y + R+ D R T++IK+ + G
Sbjct: 178 RIRTYNFTQDRVTDHRIGFVTRDIKEFMRG 207
>UNIPROTKB|Q5TF45 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0003747 "translation
release factor activity" evidence=IEA] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003747 EMBL:AL080276 eggNOG:COG0216
HOGENOM:HOG000074815 UniGene:Hs.225836 HGNC:HGNC:21051
IPI:IPI00514520 SMR:Q5TF45 STRING:Q5TF45 Ensembl:ENST00000448966
Uniprot:Q5TF45
Length = 164
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 52/113 (46%), Positives = 69/113 (61%)
Query: 81 GIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXX 140
G++ + I G AY +K E G+HR+ R + HTS ++ + P+
Sbjct: 40 GLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVIN 99
Query: 141 XPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
P DLRIDT RASGAGGQH+N TDSAVRI H+PTG+V +CQ +RSQ +NK A
Sbjct: 100 -PKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELA 151
>GENEDB_PFALCIPARUM|PF14_0265 [details] [associations]
symbol:PF14_0265 "peptide chain release factor
1, putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE014187 GO:GO:0016149 KO:K02835
RefSeq:XP_001348439.1 ProteinModelPortal:Q8ILH8
EnsemblProtists:PF14_0265:mRNA GeneID:811847 KEGG:pfa:PF14_0265
EuPathDB:PlasmoDB:PF3D7_1428600 HOGENOM:HOG000281260
ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 59/175 (33%), Positives = 89/175 (50%)
Query: 25 FNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKT 84
+ND +F I+ + G GG EA W+ LL Y + ER VE ++ + +
Sbjct: 59 YNDNKNFIR--IEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSK 116
Query: 85 VTLKI--KGKYA----YGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXX 138
L+I + K Y K+ESGIH++ R DS N H+S +++ ++
Sbjct: 117 ENLRIIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKY 176
Query: 139 XXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
DL+I T+R+S GGQ++NK +S V I H PTGI +CQ +R+Q NK A
Sbjct: 177 EINLKDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLA 231
>UNIPROTKB|Q8ILH8 [details] [associations]
symbol:PF14_0265 "Peptide chain release factor 1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AE014187 GO:GO:0016149 KO:K02835 RefSeq:XP_001348439.1
ProteinModelPortal:Q8ILH8 EnsemblProtists:PF14_0265:mRNA
GeneID:811847 KEGG:pfa:PF14_0265 EuPathDB:PlasmoDB:PF3D7_1428600
HOGENOM:HOG000281260 ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 59/175 (33%), Positives = 89/175 (50%)
Query: 25 FNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLRYCERKGFIVEILEKSNGEITGIKT 84
+ND +F I+ + G GG EA W+ LL Y + ER VE ++ + +
Sbjct: 59 YNDNKNFIR--IEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSK 116
Query: 85 VTLKI--KGKYA----YGFLKSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXX 138
L+I + K Y K+ESGIH++ R DS N H+S +++ ++
Sbjct: 117 ENLRIIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKY 176
Query: 139 XXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
DL+I T+R+S GGQ++NK +S V I H PTGI +CQ +R+Q NK A
Sbjct: 177 EINLKDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLA 231
>GENEDB_PFALCIPARUM|MAL7P1.20 [details] [associations]
symbol:MAL7P1.20 "peptide chain release factor,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 214 (80.4 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 52/135 (38%), Positives = 80/135 (59%)
Query: 2 LKEIEDNTNKLNNKIKEIE-FHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLR 60
++ I + N + K++E + ++F N+C + + SG GG EA D+ +ML Y++
Sbjct: 24 VRNIRNRYNLCSYVNKDVENYSRYFK-----NSCSLILSSGTGGTEACDFCNMLYNMYIK 78
Query: 61 Y-CE---RKGFIVEILEKSNGEITGIKTVTLKIKGKYA-YGFLKSESGIHRLVRKSPFDS 115
Y C RK E+++ S E+ GIK V +KI G+Y+ Y F+ SE GIHRLVR SPF++
Sbjct: 79 YLCRIKNRKNIKYEVIDISKNEV-GIKKVEIKIDGEYSFYNFV-SEKGIHRLVRNSPFNA 136
Query: 116 SNNRHTSFSSLFVYP 130
N + TSF + V P
Sbjct: 137 QNKKMTSFVKVDVIP 151
Score = 169 (64.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 52/172 (30%), Positives = 82/172 (47%)
Query: 99 KSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQ 158
K H+ +++S +++NN + S++ +DL I T R+ G GGQ
Sbjct: 186 KQNKNKHKQLKESD-NNNNNMNNSYNG-----GNNKMNDFVINKSDLVIQTMRSGGKGGQ 239
Query: 159 HINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXX 218
++NK ++AVRI H PT I V+ ++R+Q NK A
Sbjct: 240 NVNKVETAVRILHKPTNISVKASSERTQLLNKRNALKRIYEKLLYLQTEALKNKKYELAN 299
Query: 219 XXXXXXWGYQIRSYVLDKSR-IKDLRTNLETKNIKDIL-DGDLDNFIIASLK 268
+G QIR+YVL ++ IKD RTN+ + +I +L G++D FI A K
Sbjct: 300 KSLTH-FGEQIRNYVLYGNKMIKDTRTNVFSTDIDKVLYQGEIDIFIDAYQK 350
>UNIPROTKB|Q8IC21 [details] [associations]
symbol:MAL7P1.20 "Peptide chain release factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 214 (80.4 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 52/135 (38%), Positives = 80/135 (59%)
Query: 2 LKEIEDNTNKLNNKIKEIE-FHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLR 60
++ I + N + K++E + ++F N+C + + SG GG EA D+ +ML Y++
Sbjct: 24 VRNIRNRYNLCSYVNKDVENYSRYFK-----NSCSLILSSGTGGTEACDFCNMLYNMYIK 78
Query: 61 Y-CE---RKGFIVEILEKSNGEITGIKTVTLKIKGKYA-YGFLKSESGIHRLVRKSPFDS 115
Y C RK E+++ S E+ GIK V +KI G+Y+ Y F+ SE GIHRLVR SPF++
Sbjct: 79 YLCRIKNRKNIKYEVIDISKNEV-GIKKVEIKIDGEYSFYNFV-SEKGIHRLVRNSPFNA 136
Query: 116 SNNRHTSFSSLFVYP 130
N + TSF + V P
Sbjct: 137 QNKKMTSFVKVDVIP 151
Score = 169 (64.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 52/172 (30%), Positives = 82/172 (47%)
Query: 99 KSESGIHRLVRKSPFDSSNNRHTSFSSLFVYPEXXXXXXXXXXPADLRIDTYRASGAGGQ 158
K H+ +++S +++NN + S++ +DL I T R+ G GGQ
Sbjct: 186 KQNKNKHKQLKESD-NNNNNMNNSYNG-----GNNKMNDFVINKSDLVIQTMRSGGKGGQ 239
Query: 159 HINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWDMXXXXXXXXXXXXXXXXXXXXXX 218
++NK ++AVRI H PT I V+ ++R+Q NK A
Sbjct: 240 NVNKVETAVRILHKPTNISVKASSERTQLLNKRNALKRIYEKLLYLQTEALKNKKYELAN 299
Query: 219 XXXXXXWGYQIRSYVLDKSR-IKDLRTNLETKNIKDIL-DGDLDNFIIASLK 268
+G QIR+YVL ++ IKD RTN+ + +I +L G++D FI A K
Sbjct: 300 KSLTH-FGEQIRNYVLYGNKMIKDTRTNVFSTDIDKVLYQGEIDIFIDAYQK 350
>TAIR|locus:2082563 [details] [associations]
symbol:PrfB3 "peptide chain release factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA;ISS] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0043488 "regulation of mRNA
stability" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009772 "photosynthetic electron transport in
photosystem II" evidence=IMP] [GO:0010190 "cytochrome b6f complex
assembly" evidence=IMP] [GO:0048255 "mRNA stabilization"
evidence=IMP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0009570 EMBL:CP002686
GO:GO:0043565 Gene3D:3.30.160.20 GO:GO:0009658 GO:GO:0048255
GO:GO:0003730 GO:GO:0009772 GO:GO:0016149 GO:GO:0010190
IPI:IPI00516531 RefSeq:NP_191278.2 UniGene:At.34857
ProteinModelPortal:F4J264 SMR:F4J264 EnsemblPlants:AT3G57190.1
GeneID:824886 KEGG:ath:AT3G57190 OMA:DIIPLFL Uniprot:F4J264
Length = 406
Score = 176 (67.0 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 47/196 (23%), Positives = 96/196 (48%)
Query: 1 MLKEIEDNTNKLNNKIKEIEFHQFFNDPLDFNNCFIDIQSGAGGIEAQDWASMLLRQYLR 60
+ ++ D++ ++ + E + D D + I+SG+ G ++Q W ++ Y++
Sbjct: 138 LFEQAYDSSLDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIK 197
Query: 61 YCERKGFIVEILEKSN--GEITGIKTVTLKIKGKYAYGFLKSESGIHRLVRKSPFDSSNN 118
+ ER G + EK + +G+ + T++ + ++AYG+L E G+HRL+ S++N
Sbjct: 198 WAERLGQNARVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSN 253
Query: 119 RHTSFSSLFVYPEXXXXX-XXXXXPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIV 177
S +++ + P DL I +Y A H ++ V I HIP+G+
Sbjct: 254 EECS-ATVDIIPLFLRASPDFEVKEGDL-IVSYPAKE---DH-KIAENMVCIHHIPSGVT 307
Query: 178 VQCQNDRSQHRNKSEA 193
+Q +R++ N+ +A
Sbjct: 308 LQSSGERNRFANRIKA 323
Score = 56 (24.8 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 QIRSYVLDKSR-IKDLRTNLETKNIKDILDGDL 259
+ RSYV + + D +T LE ++K +LDG++
Sbjct: 357 ETRSYVSKGHKMVVDRKTGLEILDLKSVLDGNI 389
>UNIPROTKB|Q74EJ1 [details] [associations]
symbol:GSU0971 "Hydrolase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 143 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWD 195
AD++++ YRASG GGQH N TDSAVRI H+PTGIVVQ RSQ +N+ +A +
Sbjct: 8 ADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAME 60
>TIGR_CMR|GSU_0971 [details] [associations]
symbol:GSU_0971 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 143 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEAWD 195
AD++++ YRASG GGQH N TDSAVRI H+PTGIVVQ RSQ +N+ +A +
Sbjct: 8 ADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAME 60
>TAIR|locus:2006897 [details] [associations]
symbol:AT1G33330 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0006415 "translational termination" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=RCA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 EMBL:CP002684 GO:GO:0009507 Gene3D:3.30.160.20
GO:GO:0003747 EMBL:AC027035 EMBL:BT006129 EMBL:AK117494
IPI:IPI00545134 RefSeq:NP_174601.2 UniGene:At.28050
ProteinModelPortal:Q9C875 SMR:Q9C875 STRING:Q9C875 PRIDE:Q9C875
EnsemblPlants:AT1G33330.1 GeneID:840227 KEGG:ath:AT1G33330
TAIR:At1g33330 HOGENOM:HOG000152202 InParanoid:Q9C875 OMA:KSTIRTS
PhylomeDB:Q9C875 ProtClustDB:CLSN2680351 ArrayExpress:Q9C875
Genevestigator:Q9C875 Uniprot:Q9C875
Length = 257
Score = 169 (64.5 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 146 RIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
R++T+R SG GGQH NK DSAVR+ H+PTGIV Q DRSQH+N++ A
Sbjct: 99 RLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASA 146
>UNIPROTKB|Q74FR0 [details] [associations]
symbol:GSU0546 "Peptidyl-tRNA hydrolase-related protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 141 (54.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 28/48 (58%), Positives = 34/48 (70%)
Query: 143 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNK 190
ADL R+SGAGGQH+NKT + V+I H PTGI V+C DRSQ N+
Sbjct: 28 ADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNR 75
>TIGR_CMR|GSU_0546 [details] [associations]
symbol:GSU_0546 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 141 (54.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 28/48 (58%), Positives = 34/48 (70%)
Query: 143 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNK 190
ADL R+SGAGGQH+NKT + V+I H PTGI V+C DRSQ N+
Sbjct: 28 ADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNR 75
>CGD|CAL0005347 [details] [associations]
symbol:orf19.5488 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 CGD:CAL0005347 Gene3D:3.30.160.20 GO:GO:0005622
eggNOG:COG1186 GO:GO:0003747 HOGENOM:HOG000217812 EMBL:AACQ01000196
EMBL:AACQ01000195 RefSeq:XP_711480.1 RefSeq:XP_711504.1
ProteinModelPortal:Q59P48 STRING:Q59P48 GeneID:3646889
GeneID:3646913 KEGG:cal:CaO19.12943 KEGG:cal:CaO19.5488
Uniprot:Q59P48
Length = 171
Score = 132 (51.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 154 GAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
G GGQ INKT+S V++THIPTG+VV CQ RSQ +N++ A
Sbjct: 50 GPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQNRAIA 89
>SGD|S000004271 [details] [associations]
symbol:YLR281C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0006415 "translational
termination" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 SGD:S000004271
GO:GO:0005739 Gene3D:3.30.160.20 EMBL:BK006945 EMBL:U17243
eggNOG:COG1186 GO:GO:0003747 HOGENOM:HOG000217812
GeneTree:ENSGT00390000012759 EMBL:AY557931 PIR:S50367
RefSeq:NP_013383.1 ProteinModelPortal:Q05863 SMR:Q05863
DIP:DIP-2590N STRING:Q05863 EnsemblFungi:YLR281C GeneID:850987
KEGG:sce:YLR281C CYGD:YLR281c OMA:KHERARA OrthoDB:EOG4WHCWF
NextBio:967507 Genevestigator:Q05863 GermOnline:YLR281C
Uniprot:Q05863
Length = 155
Score = 115 (45.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 154 GAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
G GGQ INK +S V++ H PTGIVV+CQ RS+ +N+ A
Sbjct: 47 GPGGQKINKCNSKVQLRHEPTGIVVECQETRSREQNRKLA 86
>UNIPROTKB|F1NSN8 [details] [associations]
symbol:F1NSN8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 OMA:WESSKNV
GeneTree:ENSGT00390000012759 EMBL:AADN02034888 EMBL:AADN02034889
EMBL:AADN02034890 EMBL:AADN02034891 EMBL:AADN02034892
IPI:IPI00587441 Ensembl:ENSGALT00000005399 Uniprot:F1NSN8
Length = 141
Score = 113 (44.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 143 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
A+L+ R G GGQ NKT + V + H+P+GIVV+C RS +N+ A
Sbjct: 35 AELKEQFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIA 85
>FB|FBgn0050100 [details] [associations]
symbol:CG30100 species:7227 "Drosophila melanogaster"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720 EMBL:AE013599
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 EMBL:BT030757 RefSeq:NP_725560.1
UniGene:Dm.38081 SMR:A1ZAD7 STRING:A1ZAD7
EnsemblMetazoa:FBtr0087140 GeneID:246457 KEGG:dme:Dmel_CG30100
UCSC:CG30100-RA FlyBase:FBgn0050100 eggNOG:NOG295143
InParanoid:A1ZAD7 OMA:CHTHRLA OrthoDB:EOG4JH9Z9 NextBio:842552
Uniprot:A1ZAD7
Length = 146
Score = 110 (43.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 143 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
+D+ R SG GGQ +NKT + V + H+PT I V+C R +N+ EA
Sbjct: 33 SDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEA 83
>UNIPROTKB|F5H4X5 [details] [associations]
symbol:C12orf65 "Probable peptide chain release factor
C12orf65, mitochondrial" species:9606 "Homo sapiens" [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 HGNC:HGNC:26784
EMBL:AC073857 EMBL:AC068768 IPI:IPI01014644 Ensembl:ENST00000543139
ArrayExpress:F5H4X5 Bgee:F5H4X5 Uniprot:F5H4X5
Length = 138
Score = 102 (41.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 151 RASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
+ G GGQ NKT + V + HIP+GIVV+C RS +N+ A
Sbjct: 66 KGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 108
>POMBASE|SPBC1105.18c [details] [associations]
symbol:SPBC1105.18c "peptide release factor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003747
"translation release factor activity" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISM] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006415 "translational
termination" evidence=IC] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
PomBase:SPBC1105.18c GO:GO:0005739 EMBL:CU329671 Gene3D:3.30.160.20
GO:GO:0032543 eggNOG:COG1186 GO:GO:0004045 GO:GO:0003747
GO:GO:0006415 OrthoDB:EOG4WHCWF RefSeq:NP_596474.2
ProteinModelPortal:Q9Y811 STRING:Q9Y811 EnsemblFungi:SPBC1105.18c.1
GeneID:2539814 KEGG:spo:SPBC1105.18c NextBio:20800963
Uniprot:Q9Y811
Length = 162
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 154 GAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNK 190
G GGQ INKT ++ HIPTGI+V+ Q+ RS+ +N+
Sbjct: 61 GPGGQKINKTSIVAQVKHIPTGIIVRSQDTRSREQNR 97
>UNIPROTKB|Q9H3J6 [details] [associations]
symbol:C12orf65 "Probable peptide chain release factor
C12orf65, mitochondrial" species:9606 "Homo sapiens" [GO:0003747
"translation release factor activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=NAS] InterPro:IPR000352 Pfam:PF00472
PROSITE:PS00745 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
EMBL:CH471054 eggNOG:COG1186 GO:GO:0003747 EMBL:AF061733
EMBL:AK095982 EMBL:BC018145 EMBL:BC020885 EMBL:BC062329
IPI:IPI00019211 IPI:IPI00382906 RefSeq:NP_001137377.1
RefSeq:NP_001181924.1 RefSeq:NP_689482.1 UniGene:Hs.319128
ProteinModelPortal:Q9H3J6 SMR:Q9H3J6 IntAct:Q9H3J6 STRING:Q9H3J6
PhosphoSite:Q9H3J6 DMDM:74733574 PRIDE:Q9H3J6 DNASU:91574
Ensembl:ENST00000253233 Ensembl:ENST00000366329
Ensembl:ENST00000429587 GeneID:91574 KEGG:hsa:91574 UCSC:uc001uen.3
CTD:91574 GeneCards:GC12P123717 HGNC:HGNC:26784 HPA:HPA038194
MIM:613541 MIM:613559 neXtProt:NX_Q9H3J6 Orphanet:254930
Orphanet:70474 PharmGKB:PA162377963 HOGENOM:HOG000217812
HOVERGEN:HBG094928 InParanoid:Q9H3J6 OMA:WESSKNV OrthoDB:EOG4T784Q
PhylomeDB:Q9H3J6 GenomeRNAi:91574 NextBio:77303 ArrayExpress:Q9H3J6
Bgee:Q9H3J6 CleanEx:HS_C12orf65 Genevestigator:Q9H3J6
Uniprot:Q9H3J6
Length = 166
Score = 102 (41.0 bits), Expect = 0.00094, P = 0.00094
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 151 RASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNKSEA 193
+ G GGQ NKT + V + HIP+GIVV+C RS +N+ A
Sbjct: 66 KGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 278 240 0.00093 113 3 11 22 0.43 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 75
No. of states in DFA: 601 (64 KB)
Total size of DFA: 191 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.50u 0.11s 19.61t Elapsed: 00:00:02
Total cpu time: 19.52u 0.12s 19.64t Elapsed: 00:00:02
Start: Thu Aug 15 15:39:22 2013 End: Thu Aug 15 15:39:24 2013