Query psy15212
Match_columns 329
No_of_seqs 282 out of 2940
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 23:34:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15212.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15212hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1sqg_A SUN protein, FMU protei 100.0 1.2E-62 4.2E-67 480.6 27.6 304 1-327 117-429 (429)
2 2yxl_A PH0851 protein, 450AA l 100.0 1.6E-62 5.5E-67 482.5 23.3 305 1-328 129-450 (450)
3 1ixk_A Methyltransferase; open 100.0 1.6E-59 5.5E-64 441.2 29.6 281 23-327 8-315 (315)
4 3m6w_A RRNA methylase; rRNA me 100.0 6.2E-60 2.1E-64 462.9 25.4 276 30-328 1-301 (464)
5 2frx_A Hypothetical protein YE 100.0 8.1E-59 2.8E-63 458.3 26.3 280 28-328 5-312 (479)
6 3m4x_A NOL1/NOP2/SUN family pr 100.0 2.2E-59 7.5E-64 458.4 19.9 271 29-328 6-304 (456)
7 2b9e_A NOL1/NOP2/SUN domain fa 100.0 2.2E-55 7.6E-60 411.5 26.1 252 57-328 7-302 (309)
8 4fzv_A Putative methyltransfer 100.0 5.6E-55 1.9E-59 415.0 21.6 272 35-328 23-359 (359)
9 3ajd_A Putative methyltransfer 100.0 5.3E-49 1.8E-53 362.5 21.5 249 53-327 2-274 (274)
10 4dmg_A Putative uncharacterize 99.8 8.7E-21 3E-25 182.6 13.7 164 104-300 188-354 (393)
11 3lpm_A Putative methyltransfer 99.8 8E-18 2.8E-22 152.6 17.8 189 111-327 20-219 (259)
12 1wxx_A TT1595, hypothetical pr 99.8 9.2E-19 3.1E-23 168.0 11.7 164 105-300 186-353 (382)
13 2b3t_A Protein methyltransfera 99.8 6.7E-19 2.3E-23 161.2 8.6 234 48-323 23-274 (276)
14 3id6_C Fibrillarin-like rRNA/T 99.7 1.5E-17 5.2E-22 148.9 14.3 131 129-301 73-212 (232)
15 3c0k_A UPF0064 protein YCCW; P 99.7 2.3E-18 7.8E-23 165.9 9.6 168 103-300 194-367 (396)
16 3u81_A Catechol O-methyltransf 99.7 1E-17 3.5E-22 148.2 12.7 171 115-327 41-215 (221)
17 3v97_A Ribosomal RNA large sub 99.7 8.2E-18 2.8E-22 172.9 13.8 165 89-288 503-670 (703)
18 2as0_A Hypothetical protein PH 99.7 1E-17 3.6E-22 161.2 13.5 166 107-301 194-364 (396)
19 3tfw_A Putative O-methyltransf 99.7 4E-17 1.4E-21 147.3 14.8 166 116-327 47-227 (248)
20 2b78_A Hypothetical protein SM 99.7 4.2E-18 1.4E-22 163.6 7.5 161 105-294 187-352 (385)
21 3duw_A OMT, O-methyltransferas 99.7 5.5E-17 1.9E-21 143.2 12.2 166 117-326 43-223 (223)
22 2igt_A SAM dependent methyltra 99.7 5.8E-17 2E-21 152.6 11.0 158 106-292 126-288 (332)
23 2gpy_A O-methyltransferase; st 99.7 4E-17 1.4E-21 145.3 9.3 127 112-279 34-164 (233)
24 2dul_A N(2),N(2)-dimethylguano 99.7 7.9E-18 2.7E-22 161.2 4.5 164 117-327 32-233 (378)
25 1i1n_A Protein-L-isoaspartate 99.7 2.9E-16 1E-20 138.8 12.9 169 70-285 6-192 (226)
26 1yb2_A Hypothetical protein TA 99.7 4.5E-18 1.5E-22 155.7 1.1 181 52-278 28-214 (275)
27 1nv8_A HEMK protein; class I a 99.7 5.4E-17 1.8E-21 149.7 8.3 220 32-288 20-259 (284)
28 3r3h_A O-methyltransferase, SA 99.7 5.8E-17 2E-21 145.9 7.2 167 113-327 41-222 (242)
29 3tma_A Methyltransferase; thum 99.7 9.9E-16 3.4E-20 145.2 16.0 139 122-300 193-334 (354)
30 2frn_A Hypothetical protein PH 99.7 3.9E-16 1.3E-20 143.3 11.3 120 130-294 123-247 (278)
31 3evz_A Methyltransferase; NYSG 99.6 1.1E-15 3.6E-20 135.4 13.0 146 130-299 53-200 (230)
32 3njr_A Precorrin-6Y methylase; 99.6 7.5E-15 2.6E-19 128.5 17.1 132 119-300 42-175 (204)
33 3mti_A RRNA methylase; SAM-dep 99.6 1.4E-15 4.7E-20 130.2 11.9 133 130-294 20-156 (185)
34 3e05_A Precorrin-6Y C5,15-meth 99.6 6.3E-15 2.1E-19 128.3 16.2 137 111-294 20-158 (204)
35 3c3y_A Pfomt, O-methyltransfer 99.6 1E-15 3.6E-20 137.1 11.4 162 116-324 54-235 (237)
36 3k6r_A Putative transferase PH 99.6 1.2E-15 4E-20 140.1 10.9 120 130-294 123-247 (278)
37 2ozv_A Hypothetical protein AT 99.6 4.1E-15 1.4E-19 135.1 12.7 156 119-293 23-184 (260)
38 3ntv_A MW1564 protein; rossman 99.6 5E-15 1.7E-19 132.1 12.6 122 115-278 54-179 (232)
39 3dr5_A Putative O-methyltransf 99.6 3.4E-15 1.2E-19 132.5 11.2 109 129-278 53-166 (221)
40 4dzr_A Protein-(glutamine-N5) 99.6 3.3E-16 1.1E-20 136.3 4.4 145 131-292 29-178 (215)
41 1inl_A Spermidine synthase; be 99.6 4.4E-15 1.5E-19 137.6 12.3 153 132-323 90-250 (296)
42 1sui_A Caffeoyl-COA O-methyltr 99.6 4E-15 1.4E-19 134.3 11.0 126 115-276 62-191 (247)
43 2qm3_A Predicted methyltransfe 99.6 2.1E-14 7.3E-19 137.1 16.1 144 108-294 147-299 (373)
44 3p9n_A Possible methyltransfer 99.6 1.3E-14 4.6E-19 124.8 12.8 111 131-278 43-156 (189)
45 3dou_A Ribosomal RNA large sub 99.6 1E-14 3.5E-19 126.6 11.7 129 130-294 23-155 (191)
46 3c3p_A Methyltransferase; NP_9 99.6 4.1E-15 1.4E-19 130.2 8.9 121 116-279 40-164 (210)
47 2ift_A Putative methylase HI07 99.6 7.8E-15 2.7E-19 128.0 10.3 109 132-279 53-167 (201)
48 1xdz_A Methyltransferase GIDB; 99.6 4.3E-14 1.5E-18 126.4 15.3 151 129-327 67-219 (240)
49 3tr6_A O-methyltransferase; ce 99.6 1.3E-14 4.5E-19 127.9 11.6 161 116-324 48-223 (225)
50 1dus_A MJ0882; hypothetical pr 99.6 3.2E-14 1.1E-18 121.5 13.6 137 119-298 39-178 (194)
51 3eey_A Putative rRNA methylase 99.6 1.9E-14 6.6E-19 124.3 12.0 136 129-294 19-160 (197)
52 3gdh_A Trimethylguanosine synt 99.6 1.4E-14 4.9E-19 129.1 10.9 102 112-233 56-161 (241)
53 3axs_A Probable N(2),N(2)-dime 99.6 2.9E-15 1E-19 143.7 6.5 141 110-294 24-176 (392)
54 4df3_A Fibrillarin-like rRNA/T 99.5 1.7E-14 5.8E-19 128.9 10.8 115 121-275 60-182 (233)
55 3a27_A TYW2, uncharacterized p 99.5 1.2E-14 4.2E-19 132.9 9.6 107 127-279 114-222 (272)
56 2f8l_A Hypothetical protein LM 99.5 2E-14 6.8E-19 135.7 10.4 174 112-309 106-292 (344)
57 3bt7_A TRNA (uracil-5-)-methyl 99.5 3.4E-14 1.2E-18 135.5 11.3 151 133-326 214-368 (369)
58 3mb5_A SAM-dependent methyltra 99.5 1.6E-13 5.4E-18 123.3 15.0 128 118-294 79-210 (255)
59 3hm2_A Precorrin-6Y C5,15-meth 99.5 8.7E-14 3E-18 117.7 12.0 135 112-294 6-143 (178)
60 3g89_A Ribosomal RNA small sub 99.5 1.8E-13 6.2E-18 123.6 14.6 128 130-300 78-207 (249)
61 3cbg_A O-methyltransferase; cy 99.5 4.9E-14 1.7E-18 125.6 10.7 157 117-323 57-230 (232)
62 3grz_A L11 mtase, ribosomal pr 99.5 1.1E-13 3.8E-18 120.3 12.6 133 120-301 46-181 (205)
63 4dcm_A Ribosomal RNA large sub 99.5 1.1E-13 3.6E-18 132.4 13.4 128 117-280 207-339 (375)
64 1yzh_A TRNA (guanine-N(7)-)-me 99.5 1.5E-13 5E-18 120.6 13.1 116 131-276 40-157 (214)
65 2fca_A TRNA (guanine-N(7)-)-me 99.5 7.6E-14 2.6E-18 122.9 11.2 116 131-276 37-154 (213)
66 1wy7_A Hypothetical protein PH 99.5 3E-13 1E-17 117.6 14.6 123 129-298 46-168 (207)
67 2fpo_A Methylase YHHF; structu 99.5 6E-14 2.1E-18 122.4 10.1 108 132-279 54-164 (202)
68 3f4k_A Putative methyltransfer 99.5 1.7E-13 5.7E-18 123.0 13.0 111 129-280 43-155 (257)
69 2esr_A Methyltransferase; stru 99.5 1.1E-13 3.8E-18 117.4 11.1 110 130-279 29-142 (177)
70 3tm4_A TRNA (guanine N2-)-meth 99.5 2E-13 6.8E-18 130.4 14.1 129 130-299 215-346 (373)
71 2bm8_A Cephalosporin hydroxyla 99.5 6.3E-14 2.1E-18 125.5 9.8 166 112-325 60-234 (236)
72 3dmg_A Probable ribosomal RNA 99.5 1.6E-13 5.3E-18 131.5 13.1 114 131-280 232-345 (381)
73 1xxl_A YCGJ protein; structura 99.5 4.2E-13 1.4E-17 119.7 15.1 121 116-277 5-126 (239)
74 3dh0_A SAM dependent methyltra 99.5 4E-13 1.4E-17 117.6 14.7 137 124-301 29-177 (219)
75 3lbf_A Protein-L-isoaspartate 99.5 8.7E-14 3E-18 121.3 10.0 120 111-277 56-176 (210)
76 3kkz_A Uncharacterized protein 99.5 2.5E-13 8.6E-18 122.9 13.5 111 130-281 44-156 (267)
77 2okc_A Type I restriction enzy 99.5 1.4E-13 4.6E-18 134.5 12.3 170 111-308 150-343 (445)
78 2avd_A Catechol-O-methyltransf 99.5 8.9E-14 3E-18 122.9 9.9 157 119-323 56-227 (229)
79 3fpf_A Mtnas, putative unchara 99.5 3.3E-13 1.1E-17 124.5 13.7 105 126-275 116-222 (298)
80 3orh_A Guanidinoacetate N-meth 99.5 2.6E-14 8.9E-19 127.9 6.1 113 130-275 58-170 (236)
81 2yx1_A Hypothetical protein MJ 99.5 1.1E-13 3.7E-18 130.4 10.1 100 131-279 194-295 (336)
82 2pwy_A TRNA (adenine-N(1)-)-me 99.5 5.6E-13 1.9E-17 119.6 14.2 111 122-277 86-200 (258)
83 3dxy_A TRNA (guanine-N(7)-)-me 99.5 5.1E-13 1.7E-17 118.2 13.7 140 131-302 33-174 (218)
84 3vc1_A Geranyl diphosphate 2-C 99.5 2.4E-13 8.1E-18 126.3 12.0 115 122-277 106-223 (312)
85 3ofk_A Nodulation protein S; N 99.5 2.2E-13 7.4E-18 119.2 10.8 162 119-328 38-206 (216)
86 1nt2_A Fibrillarin-like PRE-rR 99.5 4.6E-13 1.6E-17 117.8 12.9 107 128-275 53-161 (210)
87 2fhp_A Methylase, putative; al 99.5 2.8E-13 9.4E-18 115.5 11.1 114 130-280 42-159 (187)
88 1vl5_A Unknown conserved prote 99.5 3.9E-13 1.3E-17 121.1 12.6 131 105-276 10-141 (260)
89 1o54_A SAM-dependent O-methylt 99.5 2.5E-13 8.7E-18 124.0 11.2 111 122-278 102-216 (277)
90 1nkv_A Hypothetical protein YJ 99.5 4.9E-13 1.7E-17 119.8 12.4 114 123-277 27-142 (256)
91 1i9g_A Hypothetical protein RV 99.5 3.7E-13 1.3E-17 122.6 11.8 115 118-277 85-205 (280)
92 2nxc_A L11 mtase, ribosomal pr 99.5 4.7E-13 1.6E-17 121.0 12.3 133 120-301 106-240 (254)
93 2pjd_A Ribosomal RNA small sub 99.4 3E-13 1E-17 127.6 10.9 126 118-280 182-308 (343)
94 1o9g_A RRNA methyltransferase; 99.4 3.8E-13 1.3E-17 120.9 10.7 121 131-277 50-216 (250)
95 2vdv_E TRNA (guanine-N(7)-)-me 99.4 4E-13 1.4E-17 120.6 10.7 166 130-328 47-235 (246)
96 4gek_A TRNA (CMO5U34)-methyltr 99.4 3.4E-13 1.2E-17 122.6 10.1 119 117-277 57-180 (261)
97 3kr9_A SAM-dependent methyltra 99.4 3.8E-12 1.3E-16 113.1 16.1 124 130-301 13-139 (225)
98 1r18_A Protein-L-isoaspartate( 99.4 1.2E-13 4.2E-18 122.2 6.3 162 68-276 11-195 (227)
99 1l3i_A Precorrin-6Y methyltran 99.4 1.2E-12 4.1E-17 111.3 12.2 131 117-294 18-150 (192)
100 1ws6_A Methyltransferase; stru 99.4 2.4E-13 8.2E-18 114.0 7.6 110 132-280 41-152 (171)
101 2yxd_A Probable cobalt-precorr 99.4 4.2E-12 1.4E-16 107.3 15.2 129 116-295 19-148 (183)
102 1jsx_A Glucose-inhibited divis 99.4 1.1E-12 3.6E-17 114.0 11.7 101 132-277 65-167 (207)
103 3dlc_A Putative S-adenosyl-L-m 99.4 1.5E-12 5.1E-17 113.3 12.7 112 125-277 37-150 (219)
104 3lec_A NADB-rossmann superfami 99.4 4.3E-12 1.5E-16 113.0 15.7 124 130-301 19-145 (230)
105 3adn_A Spermidine synthase; am 99.4 9.4E-13 3.2E-17 121.8 11.8 176 108-323 53-243 (294)
106 3bus_A REBM, methyltransferase 99.4 1.6E-12 5.6E-17 117.6 13.1 116 122-277 51-168 (273)
107 2pbf_A Protein-L-isoaspartate 99.4 2.3E-13 7.9E-18 120.2 7.2 105 129-275 77-193 (227)
108 2h1r_A Dimethyladenosine trans 99.4 3.9E-13 1.3E-17 124.6 9.0 128 114-279 24-163 (299)
109 3hem_A Cyclopropane-fatty-acyl 99.4 2.7E-12 9.3E-17 118.4 14.4 122 124-279 64-187 (302)
110 2plw_A Ribosomal RNA methyltra 99.4 2.4E-12 8.3E-17 111.2 13.1 167 130-326 20-197 (201)
111 1dl5_A Protein-L-isoaspartate 99.4 1.4E-12 4.7E-17 121.7 11.6 114 117-276 60-176 (317)
112 2hnk_A SAM-dependent O-methylt 99.4 1.8E-12 6.3E-17 115.6 11.9 133 117-279 45-185 (239)
113 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1.6E-12 5.5E-17 116.3 11.2 139 130-301 44-191 (235)
114 2yvl_A TRMI protein, hypotheti 99.4 4E-12 1.4E-16 113.3 13.7 109 123-277 82-192 (248)
115 3gnl_A Uncharacterized protein 99.4 7.3E-12 2.5E-16 112.4 15.1 123 130-300 19-144 (244)
116 2ih2_A Modification methylase 99.4 2.7E-12 9.4E-17 123.6 13.1 153 112-294 19-185 (421)
117 3cgg_A SAM-dependent methyltra 99.4 5.4E-12 1.8E-16 107.6 13.5 150 130-327 44-195 (195)
118 3jwh_A HEN1; methyltransferase 99.4 2.9E-12 9.8E-17 112.3 12.0 117 123-277 20-143 (217)
119 3jwg_A HEN1, methyltransferase 99.4 5.2E-12 1.8E-16 110.7 13.7 117 123-277 20-143 (219)
120 2h00_A Methyltransferase 10 do 99.4 4.4E-12 1.5E-16 114.0 13.4 144 132-294 65-228 (254)
121 1vbf_A 231AA long hypothetical 99.4 1.3E-12 4.5E-17 115.4 9.8 120 111-278 49-168 (231)
122 1kpg_A CFA synthase;, cyclopro 99.4 8.2E-12 2.8E-16 114.0 15.4 114 124-278 56-171 (287)
123 2o57_A Putative sarcosine dime 99.4 2.1E-12 7.3E-17 118.5 11.2 108 129-276 79-188 (297)
124 2ar0_A M.ecoki, type I restric 99.4 2.1E-12 7.3E-17 129.0 11.9 173 111-309 148-349 (541)
125 1mjf_A Spermidine synthase; sp 99.4 1.4E-12 4.9E-17 119.7 9.8 149 131-323 74-237 (281)
126 2nyu_A Putative ribosomal RNA 99.4 8.6E-12 2.9E-16 107.1 13.9 127 130-290 20-158 (196)
127 1zx0_A Guanidinoacetate N-meth 99.4 5.7E-13 1.9E-17 118.6 6.6 115 130-277 58-172 (236)
128 2xvm_A Tellurite resistance pr 99.4 5.2E-12 1.8E-16 108.4 12.5 113 123-275 23-136 (199)
129 1jg1_A PIMT;, protein-L-isoasp 99.4 1.3E-12 4.4E-17 116.3 8.8 122 110-277 69-191 (235)
130 2b25_A Hypothetical protein; s 99.4 1.9E-12 6.6E-17 121.5 10.3 112 121-275 94-219 (336)
131 3sm3_A SAM-dependent methyltra 99.4 6.8E-12 2.3E-16 110.4 13.0 110 130-277 28-143 (235)
132 3e23_A Uncharacterized protein 99.4 1.1E-11 3.8E-16 107.9 14.2 151 129-328 40-202 (211)
133 2yxe_A Protein-L-isoaspartate 99.3 2.6E-12 8.8E-17 112.3 9.8 120 112-277 57-179 (215)
134 2kw5_A SLR1183 protein; struct 99.3 4.8E-12 1.7E-16 109.4 11.4 106 130-277 28-133 (202)
135 3dtn_A Putative methyltransfer 99.3 2.2E-12 7.6E-17 114.1 9.4 110 130-279 42-152 (234)
136 1uwv_A 23S rRNA (uracil-5-)-me 99.3 6.4E-12 2.2E-16 122.2 13.5 88 127-229 281-369 (433)
137 1ve3_A Hypothetical protein PH 99.3 4.9E-12 1.7E-16 111.0 11.5 108 131-277 37-144 (227)
138 3ujc_A Phosphoethanolamine N-m 99.3 5.1E-12 1.7E-16 113.4 11.5 116 123-277 46-161 (266)
139 2fk8_A Methoxy mycolic acid sy 99.3 4.7E-12 1.6E-16 117.5 11.5 116 123-279 81-198 (318)
140 1fbn_A MJ fibrillarin homologu 99.3 5E-12 1.7E-16 112.2 11.2 107 128-274 70-177 (230)
141 2ipx_A RRNA 2'-O-methyltransfe 99.3 6.7E-12 2.3E-16 111.4 11.7 108 128-275 73-182 (233)
142 1ej0_A FTSJ; methyltransferase 99.3 1.1E-11 3.7E-16 103.7 12.4 129 130-293 20-151 (180)
143 3gu3_A Methyltransferase; alph 99.3 4.4E-12 1.5E-16 116.1 10.7 119 118-277 8-128 (284)
144 2jjq_A Uncharacterized RNA met 99.3 7.1E-12 2.4E-16 121.6 12.7 79 130-229 288-366 (425)
145 3q87_B N6 adenine specific DNA 99.3 1.2E-11 4E-16 104.9 12.6 136 118-300 7-144 (170)
146 2p8j_A S-adenosylmethionine-de 99.3 4E-12 1.4E-16 110.3 9.9 112 129-278 20-131 (209)
147 1g8a_A Fibrillarin-like PRE-rR 99.3 5.6E-12 1.9E-16 111.3 11.0 106 130-275 71-178 (227)
148 1pjz_A Thiopurine S-methyltran 99.3 3.2E-12 1.1E-16 111.5 9.3 112 128-278 18-143 (203)
149 3m70_A Tellurite resistance pr 99.3 8.6E-12 2.9E-16 113.9 12.2 109 127-275 115-223 (286)
150 3uwp_A Histone-lysine N-methyl 99.3 7.2E-12 2.5E-16 120.0 12.0 112 125-275 166-288 (438)
151 3hnr_A Probable methyltransfer 99.3 1.4E-11 4.6E-16 107.8 13.0 108 129-279 42-149 (220)
152 3ocj_A Putative exported prote 99.3 1.2E-11 4.2E-16 114.3 12.7 111 129-277 115-229 (305)
153 2pxx_A Uncharacterized protein 99.3 1.1E-11 3.7E-16 107.6 11.5 122 130-277 40-161 (215)
154 3mgg_A Methyltransferase; NYSG 99.3 1.6E-11 5.4E-16 111.4 13.1 112 124-275 29-142 (276)
155 1iy9_A Spermidine synthase; ro 99.3 8.8E-12 3E-16 114.1 11.3 111 132-277 75-191 (275)
156 2pt6_A Spermidine synthase; tr 99.3 6.8E-12 2.3E-16 117.4 10.1 133 131-298 115-255 (321)
157 2p41_A Type II methyltransfera 99.3 3.4E-12 1.2E-16 118.6 8.0 126 130-297 80-213 (305)
158 1wzn_A SAM-dependent methyltra 99.3 1.5E-11 5E-16 110.0 11.3 107 130-275 39-145 (252)
159 3l8d_A Methyltransferase; stru 99.3 1.8E-11 6.3E-16 108.5 11.8 128 130-301 51-196 (242)
160 3lkd_A Type I restriction-modi 99.3 2.1E-11 7.1E-16 121.6 13.0 179 111-309 196-395 (542)
161 1zq9_A Probable dimethyladenos 99.3 7.4E-12 2.5E-16 115.2 9.0 130 117-278 13-149 (285)
162 3g5l_A Putative S-adenosylmeth 99.3 1.7E-11 5.9E-16 109.7 11.2 110 125-276 37-146 (253)
163 3bwc_A Spermidine synthase; SA 99.3 3.2E-11 1.1E-15 112.0 13.0 130 130-293 93-229 (304)
164 1ri5_A MRNA capping enzyme; me 99.3 1.7E-11 5.8E-16 112.0 11.0 112 130-277 62-176 (298)
165 3khk_A Type I restriction-modi 99.3 1.7E-11 5.8E-16 122.4 11.9 181 111-309 224-433 (544)
166 2o07_A Spermidine synthase; st 99.3 1.2E-11 4.3E-16 114.8 9.9 112 131-277 94-211 (304)
167 2a14_A Indolethylamine N-methy 99.3 3.1E-11 1.1E-15 109.3 12.3 164 129-328 52-261 (263)
168 2vdw_A Vaccinia virus capping 99.3 2.3E-11 7.8E-16 112.9 11.2 116 132-277 48-171 (302)
169 3d2l_A SAM-dependent methyltra 99.3 3.4E-11 1.2E-15 106.7 11.7 108 130-276 31-138 (243)
170 3p2e_A 16S rRNA methylase; met 99.3 9.6E-12 3.3E-16 110.5 8.0 112 130-275 22-139 (225)
171 3lcc_A Putative methyl chlorid 99.2 5.2E-11 1.8E-15 105.5 12.7 128 133-301 67-203 (235)
172 2gb4_A Thiopurine S-methyltran 99.2 2.4E-11 8.4E-16 109.8 10.7 109 129-276 65-192 (252)
173 2ex4_A Adrenal gland protein A 99.2 8.9E-12 3.1E-16 111.0 7.7 132 131-301 78-221 (241)
174 2fyt_A Protein arginine N-meth 99.2 9E-12 3.1E-16 117.4 8.0 112 127-277 59-173 (340)
175 3ou2_A SAM-dependent methyltra 99.2 2.2E-11 7.4E-16 106.0 9.9 112 123-278 37-149 (218)
176 3g5t_A Trans-aconitate 3-methy 99.2 1.6E-11 5.4E-16 113.0 9.5 112 131-277 35-151 (299)
177 3iv6_A Putative Zn-dependent a 99.2 3.7E-11 1.3E-15 109.2 11.7 114 123-276 36-149 (261)
178 4htf_A S-adenosylmethionine-de 99.2 3.7E-11 1.3E-15 109.6 11.8 105 132-276 68-174 (285)
179 3i9f_A Putative type 11 methyl 99.2 5.8E-11 2E-15 99.7 12.1 124 127-301 12-144 (170)
180 2p35_A Trans-aconitate 2-methy 99.2 5.1E-11 1.7E-15 106.7 12.4 116 117-277 18-134 (259)
181 1m6y_A S-adenosyl-methyltransf 99.2 8.3E-12 2.8E-16 115.7 7.4 93 124-229 18-111 (301)
182 3mq2_A 16S rRNA methyltransfer 99.2 5.9E-12 2E-16 110.3 6.1 113 127-275 22-140 (218)
183 4fsd_A Arsenic methyltransfera 99.2 2.3E-11 7.8E-16 116.4 10.7 112 130-275 81-203 (383)
184 3h2b_A SAM-dependent methyltra 99.2 8.1E-11 2.8E-15 101.7 13.0 125 133-301 42-178 (203)
185 3pfg_A N-methyltransferase; N, 99.2 5.1E-11 1.8E-15 107.3 12.1 103 131-275 49-151 (263)
186 3ldu_A Putative methylase; str 99.2 1E-10 3.4E-15 112.1 14.7 103 106-227 163-312 (385)
187 3bkx_A SAM-dependent methyltra 99.2 9.2E-11 3.1E-15 106.1 13.6 121 121-279 32-163 (275)
188 3r0q_C Probable protein argini 99.2 8E-12 2.8E-16 119.4 6.7 113 128-279 59-173 (376)
189 1y8c_A S-adenosylmethionine-de 99.2 2.6E-11 8.7E-16 107.4 9.4 107 132-276 37-143 (246)
190 3q7e_A Protein arginine N-meth 99.2 2.2E-11 7.7E-16 115.1 9.5 112 130-279 64-177 (349)
191 3g2m_A PCZA361.24; SAM-depende 99.2 2.3E-11 7.8E-16 112.0 9.1 113 126-278 77-193 (299)
192 2i7c_A Spermidine synthase; tr 99.2 1.3E-11 4.3E-16 113.5 7.3 113 131-278 77-195 (283)
193 3m33_A Uncharacterized protein 99.2 1.5E-11 5.3E-16 108.6 7.6 111 130-294 46-157 (226)
194 3ldg_A Putative uncharacterize 99.2 1.3E-10 4.4E-15 111.3 14.4 103 106-227 162-311 (384)
195 2y1w_A Histone-arginine methyl 99.2 3.5E-11 1.2E-15 113.7 10.3 113 127-279 45-159 (348)
196 3bkw_A MLL3908 protein, S-aden 99.2 4.5E-11 1.5E-15 105.9 10.4 111 123-275 34-144 (243)
197 1ne2_A Hypothetical protein TA 99.2 5.5E-11 1.9E-15 102.8 10.5 114 129-294 48-161 (200)
198 2b2c_A Spermidine synthase; be 99.2 3.9E-11 1.3E-15 111.9 10.1 113 131-278 107-225 (314)
199 3fzg_A 16S rRNA methylase; met 99.2 1.3E-11 4.6E-16 106.3 6.2 108 131-279 48-157 (200)
200 3g07_A 7SK snRNA methylphospha 99.2 3E-11 1E-15 111.2 9.0 117 132-277 46-222 (292)
201 1xtp_A LMAJ004091AAA; SGPP, st 99.2 2.7E-11 9.2E-16 108.1 8.5 134 127-300 88-233 (254)
202 1g6q_1 HnRNP arginine N-methyl 99.2 8.2E-12 2.8E-16 117.1 5.3 112 129-278 35-148 (328)
203 2qfm_A Spermine synthase; sper 99.2 3.6E-11 1.2E-15 113.5 9.6 137 132-294 188-333 (364)
204 3k0b_A Predicted N6-adenine-sp 99.2 2.2E-10 7.6E-15 110.0 15.3 116 126-276 195-351 (393)
205 2yqz_A Hypothetical protein TT 99.2 6.7E-11 2.3E-15 106.0 11.0 104 129-274 36-140 (263)
206 2p7i_A Hypothetical protein; p 99.2 4.6E-11 1.6E-15 105.8 9.2 102 130-276 40-142 (250)
207 3e8s_A Putative SAM dependent 99.2 2.3E-10 7.7E-15 99.9 13.2 105 129-276 49-153 (227)
208 2i62_A Nicotinamide N-methyltr 99.2 1.1E-10 3.7E-15 104.7 11.1 159 130-327 54-261 (265)
209 1u2z_A Histone-lysine N-methyl 99.2 1.8E-10 6E-15 111.7 13.0 112 126-274 236-358 (433)
210 1xj5_A Spermidine synthase 1; 99.2 7.1E-11 2.4E-15 111.1 9.9 115 130-278 118-238 (334)
211 3b3j_A Histone-arginine methyl 99.2 5.4E-11 1.8E-15 117.2 9.3 110 129-278 155-266 (480)
212 2wa2_A Non-structural protein 99.2 1.5E-11 5E-16 112.8 4.8 109 130-277 80-195 (276)
213 1uir_A Polyamine aminopropyltr 99.2 6.6E-11 2.3E-15 110.3 9.3 115 131-277 76-197 (314)
214 3ccf_A Cyclopropane-fatty-acyl 99.2 1E-10 3.4E-15 106.5 10.1 108 124-277 49-156 (279)
215 2oxt_A Nucleoside-2'-O-methylt 99.2 1.3E-11 4.6E-16 112.4 4.2 128 130-299 72-209 (265)
216 3dli_A Methyltransferase; PSI- 99.1 1.4E-10 4.8E-15 103.1 10.0 104 130-277 39-142 (240)
217 3ege_A Putative methyltransfer 99.1 1.1E-10 3.8E-15 105.3 9.3 109 122-277 24-132 (261)
218 3thr_A Glycine N-methyltransfe 99.1 1.9E-10 6.4E-15 105.2 11.0 125 123-277 48-177 (293)
219 4hc4_A Protein arginine N-meth 99.1 8.1E-11 2.8E-15 112.2 8.8 110 131-279 82-193 (376)
220 2xyq_A Putative 2'-O-methyl tr 99.1 8.1E-11 2.8E-15 108.4 8.1 120 128-294 59-187 (290)
221 2g72_A Phenylethanolamine N-me 99.1 5.1E-10 1.8E-14 102.4 13.3 160 131-327 70-280 (289)
222 3bzb_A Uncharacterized protein 99.1 9E-10 3.1E-14 100.8 14.7 134 130-300 77-232 (281)
223 2avn_A Ubiquinone/menaquinone 99.1 1.1E-10 3.9E-15 105.1 8.4 101 132-277 54-154 (260)
224 4hg2_A Methyltransferase type 99.1 1.2E-10 4E-15 105.7 8.2 101 132-279 39-139 (257)
225 2gs9_A Hypothetical protein TT 99.1 2.8E-10 9.6E-15 98.8 9.9 98 132-277 36-134 (211)
226 3ufb_A Type I restriction-modi 99.1 9.5E-10 3.2E-14 109.5 14.6 173 110-306 195-396 (530)
227 3gjy_A Spermidine synthase; AP 99.1 2.6E-10 8.8E-15 106.2 9.7 133 134-300 91-226 (317)
228 3ggd_A SAM-dependent methyltra 99.1 5.7E-10 1.9E-14 99.2 11.6 113 129-277 53-165 (245)
229 3ll7_A Putative methyltransfer 99.1 9.1E-11 3.1E-15 112.8 6.4 82 131-229 92-176 (410)
230 3htx_A HEN1; HEN1, small RNA m 99.1 6.1E-10 2.1E-14 114.3 11.8 114 125-277 714-836 (950)
231 1yub_A Ermam, rRNA methyltrans 99.1 6.9E-12 2.4E-16 112.6 -2.4 127 114-275 11-145 (245)
232 3bxo_A N,N-dimethyltransferase 99.0 9.3E-10 3.2E-14 97.0 11.1 106 131-278 39-144 (239)
233 1qzz_A RDMB, aclacinomycin-10- 99.0 1.8E-09 6E-14 102.3 13.7 110 126-276 176-288 (374)
234 3gru_A Dimethyladenosine trans 99.0 8.5E-10 2.9E-14 101.9 11.1 88 120-227 38-125 (295)
235 3cc8_A Putative methyltransfer 99.0 5.5E-10 1.9E-14 97.6 9.0 101 131-276 31-131 (230)
236 3dp7_A SAM-dependent methyltra 99.0 9E-09 3.1E-13 97.5 17.8 111 131-279 178-291 (363)
237 3bgv_A MRNA CAP guanine-N7 met 99.0 1.1E-09 3.6E-14 101.5 11.1 115 131-277 33-157 (313)
238 3s1s_A Restriction endonucleas 99.0 9.4E-10 3.2E-14 112.6 11.4 175 111-309 294-504 (878)
239 1p91_A Ribosomal RNA large sub 99.0 7.5E-10 2.6E-14 99.9 9.3 96 131-277 84-180 (269)
240 3v97_A Ribosomal RNA large sub 99.0 2.1E-09 7.3E-14 110.4 13.5 118 127-275 185-347 (703)
241 2r3s_A Uncharacterized protein 99.0 3.2E-09 1.1E-13 98.8 13.3 109 131-279 164-275 (335)
242 2zfu_A Nucleomethylin, cerebra 99.0 1.9E-09 6.5E-14 93.9 10.5 118 123-301 58-175 (215)
243 2r6z_A UPF0341 protein in RSP 99.0 1.7E-10 5.9E-15 104.6 3.9 91 121-228 72-173 (258)
244 1qam_A ERMC' methyltransferase 99.0 2.2E-09 7.4E-14 96.4 10.7 90 117-227 15-105 (244)
245 1x19_A CRTF-related protein; m 99.0 1.3E-08 4.4E-13 96.1 16.4 113 124-277 182-297 (359)
246 1vlm_A SAM-dependent methyltra 99.0 5E-09 1.7E-13 91.7 12.6 95 132-277 47-141 (219)
247 3hp7_A Hemolysin, putative; st 99.0 3.8E-09 1.3E-13 97.2 11.6 99 132-274 85-184 (291)
248 3i53_A O-methyltransferase; CO 99.0 8.9E-09 3E-13 96.1 14.3 108 130-278 167-277 (332)
249 1tw3_A COMT, carminomycin 4-O- 99.0 2.8E-09 9.7E-14 100.4 11.0 110 127-277 178-290 (360)
250 3evf_A RNA-directed RNA polyme 99.0 2.5E-09 8.4E-14 96.8 9.9 153 130-324 72-226 (277)
251 2cmg_A Spermidine synthase; tr 98.9 2.6E-09 9.1E-14 97.0 10.2 98 132-278 72-174 (262)
252 2aot_A HMT, histamine N-methyl 98.9 1.8E-09 6.1E-14 99.0 8.7 114 130-277 50-174 (292)
253 3gwz_A MMCR; methyltransferase 98.9 1.8E-08 6.3E-13 95.6 16.0 112 127-279 197-311 (369)
254 3opn_A Putative hemolysin; str 98.9 8.8E-10 3E-14 98.3 6.3 100 132-274 37-136 (232)
255 3mcz_A O-methyltransferase; ad 98.9 1.1E-08 3.7E-13 96.1 13.6 112 129-278 175-290 (352)
256 2ip2_A Probable phenazine-spec 98.9 6.4E-09 2.2E-13 97.0 11.6 109 128-278 164-275 (334)
257 2oyr_A UPF0341 protein YHIQ; a 98.9 1.8E-09 6.3E-14 97.7 7.4 89 121-227 75-175 (258)
258 3tqs_A Ribosomal RNA small sub 98.9 4.5E-09 1.5E-13 95.1 9.9 90 121-227 18-107 (255)
259 3lcv_B Sisomicin-gentamicin re 98.9 3.8E-09 1.3E-13 95.2 8.8 101 133-273 133-234 (281)
260 2qe6_A Uncharacterized protein 98.9 3E-08 1E-12 90.5 14.6 119 132-278 77-199 (274)
261 3tka_A Ribosomal RNA small sub 98.9 9.1E-09 3.1E-13 95.7 10.4 90 124-229 49-141 (347)
262 3gcz_A Polyprotein; flavivirus 98.8 5.3E-09 1.8E-13 94.8 8.0 150 130-324 88-243 (282)
263 3eld_A Methyltransferase; flav 98.8 1.2E-08 4.1E-13 93.0 10.3 150 130-324 79-233 (300)
264 3frh_A 16S rRNA methylase; met 98.8 2E-08 6.8E-13 89.6 11.0 107 131-279 104-211 (253)
265 3fut_A Dimethyladenosine trans 98.8 1E-08 3.5E-13 93.5 9.2 87 120-227 35-121 (271)
266 2px2_A Genome polyprotein [con 98.8 6.6E-09 2.2E-13 92.8 7.4 123 130-298 71-206 (269)
267 4e2x_A TCAB9; kijanose, tetron 98.8 3.2E-09 1.1E-13 102.1 4.6 129 127-301 102-249 (416)
268 3cvo_A Methyltransferase-like 98.8 6.1E-08 2.1E-12 84.4 12.2 129 131-292 29-169 (202)
269 1af7_A Chemotaxis receptor met 98.8 1.4E-08 4.8E-13 92.8 8.3 106 132-274 105-251 (274)
270 3sso_A Methyltransferase; macr 98.7 8.2E-09 2.8E-13 98.6 6.3 102 132-276 216-325 (419)
271 3ftd_A Dimethyladenosine trans 98.7 3.8E-08 1.3E-12 88.6 7.8 88 120-227 19-106 (249)
272 3uzu_A Ribosomal RNA small sub 98.6 5.3E-08 1.8E-12 89.1 8.4 89 121-227 31-125 (279)
273 3lst_A CALO1 methyltransferase 98.6 3.9E-08 1.3E-12 92.5 7.2 107 127-277 179-288 (348)
274 3giw_A Protein of unknown func 98.6 7.5E-08 2.6E-12 87.7 8.6 114 133-277 79-202 (277)
275 3o4f_A Spermidine synthase; am 98.6 3.8E-07 1.3E-11 83.7 13.3 135 128-298 80-223 (294)
276 1wg8_A Predicted S-adenosylmet 98.6 3.5E-08 1.2E-12 89.8 6.1 88 124-228 14-101 (285)
277 4a6d_A Hydroxyindole O-methylt 98.6 5.3E-07 1.8E-11 85.0 13.7 112 127-279 174-287 (353)
278 1qyr_A KSGA, high level kasuga 98.5 6.6E-08 2.3E-12 87.2 5.3 89 122-228 11-102 (252)
279 4azs_A Methyltransferase WBDD; 98.5 2.2E-07 7.4E-12 93.3 8.7 74 132-222 66-140 (569)
280 2qy6_A UPF0209 protein YFCK; s 98.5 2.2E-07 7.5E-12 84.0 6.8 128 130-302 58-232 (257)
281 3reo_A (ISO)eugenol O-methyltr 98.4 9.2E-07 3.2E-11 83.8 11.3 103 130-279 201-304 (368)
282 3p9c_A Caffeic acid O-methyltr 98.4 1.2E-06 4.2E-11 82.8 11.0 102 130-278 199-301 (364)
283 1fp1_D Isoliquiritigenin 2'-O- 98.4 6.2E-07 2.1E-11 85.0 7.7 100 130-276 207-307 (372)
284 2ld4_A Anamorsin; methyltransf 98.4 1.6E-07 5.4E-12 79.1 3.1 93 128-275 8-101 (176)
285 1fp2_A Isoflavone O-methyltran 98.3 1.2E-06 4.2E-11 82.2 8.6 102 130-278 186-291 (352)
286 4auk_A Ribosomal RNA large sub 98.3 1.9E-06 6.7E-11 81.3 9.5 75 130-229 209-283 (375)
287 3p8z_A Mtase, non-structural p 98.3 1.1E-06 3.8E-11 77.4 6.9 119 130-289 76-197 (267)
288 2wk1_A NOVP; transferase, O-me 98.3 5E-06 1.7E-10 76.0 11.1 121 134-295 108-263 (282)
289 3c6k_A Spermine synthase; sper 98.2 2.3E-06 7.8E-11 81.1 8.6 159 108-293 177-349 (381)
290 4gqb_A Protein arginine N-meth 98.2 4E-06 1.4E-10 84.6 10.6 117 133-289 358-483 (637)
291 2oo3_A Protein involved in cat 98.2 1.3E-06 4.5E-11 79.4 5.4 79 133-227 92-170 (283)
292 3lkz_A Non-structural protein 98.2 9.2E-06 3.2E-10 73.8 10.8 127 130-296 92-225 (321)
293 3r24_A NSP16, 2'-O-methyl tran 98.1 4.9E-06 1.7E-10 75.5 7.6 145 129-326 106-258 (344)
294 1zg3_A Isoflavanone 4'-O-methy 98.1 8.6E-06 2.9E-10 76.6 9.4 101 131-278 192-296 (358)
295 3g7u_A Cytosine-specific methy 98.1 3.3E-05 1.1E-09 73.4 12.9 88 134-235 3-90 (376)
296 3ua3_A Protein arginine N-meth 97.9 1.5E-05 5E-10 80.8 7.4 124 133-290 410-551 (745)
297 1g55_A DNA cytosine methyltran 97.8 1.2E-05 4.1E-10 75.5 4.9 82 134-234 3-86 (343)
298 2c7p_A Modification methylase 97.8 4.7E-05 1.6E-09 71.0 8.7 79 133-234 11-89 (327)
299 2zig_A TTHA0409, putative modi 97.6 0.00015 5E-09 66.5 8.0 59 131-190 234-293 (297)
300 2k4m_A TR8_protein, UPF0146 pr 97.5 8.9E-05 3E-09 60.7 4.9 88 130-276 33-122 (153)
301 2qrv_A DNA (cytosine-5)-methyl 97.3 0.00085 2.9E-08 61.6 9.4 84 131-233 14-100 (295)
302 1g60_A Adenine-specific methyl 97.3 0.00034 1.2E-08 62.8 6.3 50 130-180 210-259 (260)
303 3ubt_Y Modification methylase 97.2 0.0007 2.4E-08 62.6 8.2 78 134-234 1-79 (331)
304 3qv2_A 5-cytosine DNA methyltr 97.1 0.00063 2.2E-08 63.3 6.8 82 133-234 10-96 (327)
305 4h0n_A DNMT2; SAH binding, tra 97.1 0.00095 3.3E-08 62.3 7.2 82 134-234 4-87 (333)
306 3vyw_A MNMC2; tRNA wobble urid 97.0 0.0019 6.6E-08 59.3 8.4 126 134-302 98-245 (308)
307 3two_A Mannitol dehydrogenase; 97.0 0.0029 9.9E-08 58.9 9.8 91 129-274 173-264 (348)
308 1i4w_A Mitochondrial replicati 96.9 0.0016 5.5E-08 61.2 6.7 80 112-193 31-118 (353)
309 3s2e_A Zinc-containing alcohol 96.8 0.0013 4.6E-08 60.9 6.1 50 128-181 162-212 (340)
310 1pl8_A Human sorbitol dehydrog 96.8 0.0077 2.6E-07 56.2 11.1 50 128-181 167-218 (356)
311 1e3j_A NADP(H)-dependent ketos 96.7 0.01 3.6E-07 55.1 11.4 50 128-181 164-214 (352)
312 4ej6_A Putative zinc-binding d 96.7 0.0022 7.7E-08 60.3 6.3 51 127-181 177-229 (370)
313 2zig_A TTHA0409, putative modi 96.6 0.0016 5.6E-08 59.5 4.9 77 182-276 22-98 (297)
314 2efj_A 3,7-dimethylxanthine me 96.6 0.014 4.9E-07 55.2 11.2 127 133-277 53-227 (384)
315 3me5_A Cytosine-specific methy 96.6 0.0028 9.7E-08 61.9 6.4 98 133-234 88-187 (482)
316 3b5i_A S-adenosyl-L-methionine 96.6 0.01 3.4E-07 56.2 9.9 26 252-277 202-227 (374)
317 2dph_A Formaldehyde dismutase; 96.6 0.0019 6.5E-08 61.4 5.0 48 129-180 182-231 (398)
318 1f8f_A Benzyl alcohol dehydrog 96.5 0.0032 1.1E-07 59.1 6.1 51 127-181 185-237 (371)
319 1uuf_A YAHK, zinc-type alcohol 96.5 0.0096 3.3E-07 55.9 9.4 49 129-181 191-240 (369)
320 1kol_A Formaldehyde dehydrogen 96.5 0.0037 1.3E-07 59.3 6.4 49 129-181 182-232 (398)
321 2py6_A Methyltransferase FKBM; 96.4 0.0083 2.9E-07 57.4 8.6 59 129-187 223-289 (409)
322 1m6e_X S-adenosyl-L-methionnin 96.3 0.0091 3.1E-07 56.1 8.0 125 134-276 53-210 (359)
323 3fpc_A NADP-dependent alcohol 96.3 0.0096 3.3E-07 55.4 8.1 102 128-274 162-265 (352)
324 1cdo_A Alcohol dehydrogenase; 96.2 0.019 6.4E-07 53.8 9.7 50 128-181 188-239 (374)
325 3m6i_A L-arabinitol 4-dehydrog 96.2 0.029 9.8E-07 52.3 10.9 47 128-174 175-223 (363)
326 1boo_A Protein (N-4 cytosine-s 96.2 0.00095 3.2E-08 61.9 0.5 63 130-193 250-312 (323)
327 2jhf_A Alcohol dehydrogenase E 96.2 0.022 7.6E-07 53.3 10.1 50 128-181 187-238 (374)
328 3uog_A Alcohol dehydrogenase; 96.2 0.021 7.2E-07 53.3 9.9 50 128-181 185-235 (363)
329 1p0f_A NADP-dependent alcohol 96.2 0.02 6.9E-07 53.6 9.6 50 128-181 187-238 (373)
330 1boo_A Protein (N-4 cytosine-s 96.1 0.0067 2.3E-07 56.1 5.7 72 182-277 15-86 (323)
331 4dkj_A Cytosine-specific methy 96.0 0.033 1.1E-06 53.2 10.4 44 134-177 11-60 (403)
332 2fzw_A Alcohol dehydrogenase c 96.0 0.024 8.1E-07 53.1 9.4 50 128-181 186-237 (373)
333 3uko_A Alcohol dehydrogenase c 96.0 0.01 3.5E-07 55.8 6.8 50 128-181 189-240 (378)
334 1e3i_A Alcohol dehydrogenase, 96.0 0.028 9.5E-07 52.7 9.8 50 128-181 191-242 (376)
335 2h6e_A ADH-4, D-arabinose 1-de 95.9 0.0087 3E-07 55.5 5.6 48 129-181 168-218 (344)
336 1piw_A Hypothetical zinc-type 95.8 0.012 4.1E-07 54.9 6.4 50 128-181 175-225 (360)
337 1g60_A Adenine-specific methyl 95.8 0.0043 1.5E-07 55.5 3.1 72 182-277 5-76 (260)
338 3gms_A Putative NADPH:quinone 95.8 0.02 6.9E-07 52.9 7.7 51 127-181 139-191 (340)
339 3jv7_A ADH-A; dehydrogenase, n 95.8 0.027 9.3E-07 52.0 8.4 100 129-274 168-269 (345)
340 1eg2_A Modification methylase 95.7 0.011 3.7E-07 54.7 5.5 49 130-179 240-291 (319)
341 1vj0_A Alcohol dehydrogenase, 95.7 0.027 9.3E-07 53.0 8.4 50 128-181 190-242 (380)
342 3goh_A Alcohol dehydrogenase, 95.7 0.015 5.3E-07 53.0 6.4 50 127-181 137-187 (315)
343 1pqw_A Polyketide synthase; ro 95.7 0.021 7.3E-07 48.2 6.8 45 128-172 34-80 (198)
344 4eez_A Alcohol dehydrogenase 1 95.6 0.03 1E-06 51.7 8.1 49 129-181 160-210 (348)
345 3pvc_A TRNA 5-methylaminomethy 95.6 0.025 8.6E-07 57.5 8.2 124 132-294 58-223 (689)
346 2hwk_A Helicase NSP2; rossman 95.6 0.048 1.6E-06 49.2 8.8 95 215-327 205-299 (320)
347 4a2c_A Galactitol-1-phosphate 95.5 0.044 1.5E-06 50.5 8.9 51 127-181 155-207 (346)
348 4dvj_A Putative zinc-dependent 95.5 0.046 1.6E-06 51.0 8.9 96 132-274 171-269 (363)
349 1rjw_A ADH-HT, alcohol dehydro 95.5 0.017 5.8E-07 53.4 5.8 49 129-181 161-210 (339)
350 1v3u_A Leukotriene B4 12- hydr 95.4 0.053 1.8E-06 49.7 9.1 44 128-171 141-186 (333)
351 4b7c_A Probable oxidoreductase 95.4 0.017 5.8E-07 53.2 5.6 52 127-181 144-197 (336)
352 2j3h_A NADP-dependent oxidored 95.4 0.042 1.4E-06 50.7 8.1 52 127-181 150-203 (345)
353 3tjr_A Short chain dehydrogena 95.3 0.1 3.6E-06 47.2 10.4 128 132-275 30-167 (301)
354 2hcy_A Alcohol dehydrogenase 1 95.2 0.043 1.5E-06 50.8 7.6 49 129-181 166-216 (347)
355 3fbg_A Putative arginate lyase 95.2 0.037 1.3E-06 51.2 7.1 46 132-181 150-197 (346)
356 3qwb_A Probable quinone oxidor 95.1 0.075 2.6E-06 48.8 9.0 49 129-181 145-195 (334)
357 1jvb_A NAD(H)-dependent alcoho 95.1 0.041 1.4E-06 50.9 7.3 45 129-173 167-214 (347)
358 3swr_A DNA (cytosine-5)-methyl 95.1 0.035 1.2E-06 58.8 7.5 94 134-233 541-635 (1002)
359 4eye_A Probable oxidoreductase 95.1 0.075 2.6E-06 49.1 8.9 50 128-181 155-206 (342)
360 3jyn_A Quinone oxidoreductase; 95.0 0.065 2.2E-06 49.0 8.3 50 128-181 136-187 (325)
361 2eih_A Alcohol dehydrogenase; 95.0 0.081 2.8E-06 48.8 8.9 45 129-173 163-209 (343)
362 2c0c_A Zinc binding alcohol de 95.0 0.036 1.2E-06 51.8 6.5 50 128-181 159-210 (362)
363 3ip1_A Alcohol dehydrogenase, 94.9 0.15 5E-06 48.3 10.6 49 129-181 210-260 (404)
364 4fs3_A Enoyl-[acyl-carrier-pro 94.9 0.25 8.5E-06 43.6 11.4 132 132-275 5-146 (256)
365 2d8a_A PH0655, probable L-thre 94.8 0.057 1.9E-06 50.0 7.3 49 128-181 164-214 (348)
366 2cf5_A Atccad5, CAD, cinnamyl 94.8 0.053 1.8E-06 50.5 7.0 50 129-181 176-227 (357)
367 3r1i_A Short-chain type dehydr 94.8 0.16 5.3E-06 45.4 9.9 73 119-193 19-94 (276)
368 3pxx_A Carveol dehydrogenase; 94.7 0.47 1.6E-05 42.0 13.0 127 132-276 9-154 (287)
369 3lyl_A 3-oxoacyl-(acyl-carrier 94.7 0.26 8.7E-06 42.8 10.9 86 133-227 5-93 (247)
370 3is3_A 17BETA-hydroxysteroid d 94.7 0.3 1E-05 43.2 11.5 130 132-277 17-154 (270)
371 4ft4_B DNA (cytosine-5)-methyl 94.7 0.047 1.6E-06 56.4 7.0 43 133-175 212-260 (784)
372 1yqd_A Sinapyl alcohol dehydro 94.7 0.089 3E-06 49.1 8.3 50 129-181 183-234 (366)
373 1eg2_A Modification methylase 94.6 0.013 4.6E-07 54.1 2.5 66 182-275 39-106 (319)
374 3rkr_A Short chain oxidoreduct 94.6 0.31 1.1E-05 42.9 11.4 61 132-193 28-91 (262)
375 3nx4_A Putative oxidoreductase 94.6 0.079 2.7E-06 48.3 7.6 94 130-274 143-240 (324)
376 3oig_A Enoyl-[acyl-carrier-pro 94.5 0.37 1.3E-05 42.3 11.6 133 132-276 6-148 (266)
377 3v2g_A 3-oxoacyl-[acyl-carrier 94.5 0.4 1.4E-05 42.6 11.8 130 132-277 30-167 (271)
378 1xa0_A Putative NADPH dependen 94.4 0.076 2.6E-06 48.6 7.1 49 129-181 145-196 (328)
379 4dup_A Quinone oxidoreductase; 94.3 0.041 1.4E-06 51.1 5.1 50 128-181 163-214 (353)
380 1iz0_A Quinone oxidoreductase; 94.3 0.054 1.8E-06 49.0 5.8 48 130-181 123-172 (302)
381 1ja9_A 4HNR, 1,3,6,8-tetrahydr 94.3 0.17 5.8E-06 44.5 9.0 127 132-275 20-155 (274)
382 3qiv_A Short-chain dehydrogena 94.3 0.48 1.6E-05 41.2 11.8 61 132-193 8-71 (253)
383 4eso_A Putative oxidoreductase 94.3 0.17 5.9E-06 44.5 8.9 126 132-276 7-139 (255)
384 1wma_A Carbonyl reductase [NAD 94.2 0.29 9.9E-06 42.7 10.3 128 132-276 3-139 (276)
385 2jah_A Clavulanic acid dehydro 94.2 0.33 1.1E-05 42.4 10.4 60 133-193 7-69 (247)
386 3h7a_A Short chain dehydrogena 94.2 0.23 7.9E-06 43.6 9.4 86 132-227 6-94 (252)
387 3krt_A Crotonyl COA reductase; 94.1 0.089 3E-06 50.7 7.1 50 128-181 224-275 (456)
388 3ftp_A 3-oxoacyl-[acyl-carrier 94.1 0.3 1E-05 43.4 10.1 61 132-193 27-90 (270)
389 2b5w_A Glucose dehydrogenase; 94.0 0.039 1.3E-06 51.4 4.2 49 129-181 163-224 (357)
390 3tfo_A Putative 3-oxoacyl-(acy 94.0 0.31 1.1E-05 43.2 10.1 60 133-193 4-66 (264)
391 3grk_A Enoyl-(acyl-carrier-pro 94.0 0.47 1.6E-05 42.6 11.4 132 132-276 30-170 (293)
392 1wly_A CAAR, 2-haloacrylate re 94.0 0.2 6.7E-06 45.9 8.9 46 128-173 141-188 (333)
393 3av4_A DNA (cytosine-5)-methyl 94.0 0.14 4.6E-06 55.8 8.8 94 133-233 851-946 (1330)
394 1yb1_A 17-beta-hydroxysteroid 94.0 0.41 1.4E-05 42.3 10.8 61 132-193 30-93 (272)
395 1yb5_A Quinone oxidoreductase; 94.0 0.12 4.2E-06 47.9 7.6 50 128-181 166-217 (351)
396 3gaf_A 7-alpha-hydroxysteroid 94.0 0.29 1E-05 42.9 9.8 128 132-276 11-147 (256)
397 4egf_A L-xylulose reductase; s 94.0 0.27 9.1E-06 43.5 9.5 61 132-193 19-83 (266)
398 3rih_A Short chain dehydrogena 93.9 0.16 5.4E-06 45.9 8.1 77 116-193 16-104 (293)
399 1vl8_A Gluconate 5-dehydrogena 93.9 0.58 2E-05 41.3 11.7 61 132-193 20-84 (267)
400 2ae2_A Protein (tropinone redu 93.9 0.51 1.8E-05 41.3 11.2 61 132-193 8-71 (260)
401 4a0s_A Octenoyl-COA reductase/ 93.8 0.17 5.9E-06 48.4 8.4 50 128-181 216-267 (447)
402 2dq4_A L-threonine 3-dehydroge 93.7 0.062 2.1E-06 49.6 5.0 46 127-173 160-207 (343)
403 3r3s_A Oxidoreductase; structu 93.7 0.52 1.8E-05 42.3 11.0 128 132-276 48-186 (294)
404 1qor_A Quinone oxidoreductase; 93.7 0.14 4.9E-06 46.7 7.4 46 128-173 136-183 (327)
405 3pgx_A Carveol dehydrogenase; 93.6 0.36 1.2E-05 42.9 9.8 128 132-276 14-165 (280)
406 3ijr_A Oxidoreductase, short c 93.6 0.75 2.6E-05 41.2 11.9 128 132-276 46-183 (291)
407 3ps9_A TRNA 5-methylaminomethy 93.5 0.13 4.3E-06 52.2 7.3 122 133-293 67-230 (676)
408 1ae1_A Tropinone reductase-I; 93.4 0.46 1.6E-05 42.1 10.1 61 132-193 20-83 (273)
409 3tos_A CALS11; methyltransfera 93.4 0.25 8.5E-06 44.1 8.2 126 131-294 69-237 (257)
410 1geg_A Acetoin reductase; SDR 93.4 0.45 1.6E-05 41.6 9.9 60 133-193 2-64 (256)
411 3imf_A Short chain dehydrogena 93.4 0.52 1.8E-05 41.3 10.3 60 133-193 6-68 (257)
412 3awd_A GOX2181, putative polyo 93.3 0.5 1.7E-05 41.1 10.1 61 132-193 12-75 (260)
413 1gee_A Glucose 1-dehydrogenase 93.3 0.44 1.5E-05 41.5 9.8 60 133-193 7-70 (261)
414 3ksu_A 3-oxoacyl-acyl carrier 93.3 0.47 1.6E-05 41.8 9.9 129 132-276 10-148 (262)
415 3l77_A Short-chain alcohol deh 93.2 0.55 1.9E-05 40.3 10.1 60 133-193 2-65 (235)
416 2j8z_A Quinone oxidoreductase; 93.2 0.24 8.2E-06 45.8 8.1 45 128-172 158-204 (354)
417 4ibo_A Gluconate dehydrogenase 93.2 0.37 1.3E-05 42.8 9.1 61 132-193 25-88 (271)
418 3ucx_A Short chain dehydrogena 93.2 0.47 1.6E-05 41.8 9.7 61 132-193 10-73 (264)
419 1fmc_A 7 alpha-hydroxysteroid 93.1 0.55 1.9E-05 40.6 10.0 61 132-193 10-73 (255)
420 3sc4_A Short chain dehydrogena 93.1 0.8 2.7E-05 40.8 11.3 129 132-276 8-152 (285)
421 3svt_A Short-chain type dehydr 93.1 0.86 2.9E-05 40.4 11.4 61 132-193 10-76 (281)
422 3k31_A Enoyl-(acyl-carrier-pro 93.1 0.8 2.7E-05 41.1 11.3 132 132-276 29-169 (296)
423 3oec_A Carveol dehydrogenase ( 93.1 0.71 2.4E-05 42.0 11.0 87 132-228 45-147 (317)
424 1g0o_A Trihydroxynaphthalene r 93.0 0.93 3.2E-05 40.2 11.5 129 132-276 28-164 (283)
425 3pk0_A Short-chain dehydrogena 93.0 0.64 2.2E-05 40.9 10.3 61 132-193 9-73 (262)
426 4imr_A 3-oxoacyl-(acyl-carrier 92.9 0.53 1.8E-05 41.9 9.7 127 132-275 32-167 (275)
427 3sju_A Keto reductase; short-c 92.9 0.46 1.6E-05 42.3 9.3 61 132-193 23-86 (279)
428 2rhc_B Actinorhodin polyketide 92.9 0.71 2.4E-05 41.0 10.5 61 132-193 21-84 (277)
429 3ai3_A NADPH-sorbose reductase 92.9 0.77 2.6E-05 40.2 10.7 60 133-193 7-70 (263)
430 2hq1_A Glucose/ribitol dehydro 92.8 0.75 2.6E-05 39.6 10.4 60 133-193 5-68 (247)
431 3oid_A Enoyl-[acyl-carrier-pro 92.8 0.63 2.1E-05 40.9 10.0 61 132-193 3-67 (258)
432 1zem_A Xylitol dehydrogenase; 92.8 0.58 2E-05 41.0 9.8 61 132-193 6-69 (262)
433 2uvd_A 3-oxoacyl-(acyl-carrier 92.8 0.8 2.7E-05 39.7 10.6 60 133-193 4-67 (246)
434 1xq1_A Putative tropinone redu 92.8 0.75 2.6E-05 40.2 10.5 60 133-193 14-76 (266)
435 2zb4_A Prostaglandin reductase 92.8 0.12 4.2E-06 47.8 5.5 52 127-181 153-209 (357)
436 3v8b_A Putative dehydrogenase, 92.7 0.65 2.2E-05 41.4 10.1 61 132-193 27-90 (283)
437 4fn4_A Short chain dehydrogena 92.7 0.82 2.8E-05 40.5 10.6 61 132-193 6-69 (254)
438 3ioy_A Short-chain dehydrogena 92.7 0.47 1.6E-05 43.2 9.3 61 132-193 7-72 (319)
439 3s55_A Putative short-chain de 92.6 0.9 3.1E-05 40.2 10.9 61 132-193 9-84 (281)
440 1tt7_A YHFP; alcohol dehydroge 92.6 0.13 4.5E-06 47.0 5.4 49 129-181 146-197 (330)
441 4dmm_A 3-oxoacyl-[acyl-carrier 92.6 0.89 3E-05 40.2 10.7 128 132-275 27-164 (269)
442 2c07_A 3-oxoacyl-(acyl-carrier 92.6 0.6 2E-05 41.5 9.6 60 133-193 44-106 (285)
443 2cdc_A Glucose dehydrogenase g 92.5 0.17 5.8E-06 47.1 6.1 43 133-181 181-229 (366)
444 1w6u_A 2,4-dienoyl-COA reducta 92.5 1 3.5E-05 40.1 11.2 61 132-193 25-89 (302)
445 3gaz_A Alcohol dehydrogenase s 92.5 0.33 1.1E-05 44.7 8.0 50 128-182 146-197 (343)
446 4g81_D Putative hexonate dehyd 92.3 0.81 2.8E-05 40.6 10.0 128 132-275 8-145 (255)
447 3lf2_A Short chain oxidoreduct 92.3 1.4 4.9E-05 38.6 11.7 126 133-275 8-145 (265)
448 1mxh_A Pteridine reductase 2; 92.3 1.5 5E-05 38.6 11.8 59 133-192 11-74 (276)
449 2pnf_A 3-oxoacyl-[acyl-carrier 92.3 0.79 2.7E-05 39.4 9.8 60 133-193 7-70 (248)
450 3tsc_A Putative oxidoreductase 92.3 0.81 2.8E-05 40.5 10.1 61 132-193 10-86 (277)
451 3gvc_A Oxidoreductase, probabl 92.2 1.1 3.8E-05 39.8 10.9 124 132-275 28-161 (277)
452 3edm_A Short chain dehydrogena 92.2 0.61 2.1E-05 40.9 9.0 128 132-276 7-144 (259)
453 3cxt_A Dehydrogenase with diff 92.1 0.95 3.2E-05 40.6 10.4 61 132-193 33-96 (291)
454 1yxm_A Pecra, peroxisomal tran 92.1 0.99 3.4E-05 40.3 10.6 60 133-193 18-85 (303)
455 3u5t_A 3-oxoacyl-[acyl-carrier 92.1 0.77 2.6E-05 40.6 9.7 129 132-277 26-163 (267)
456 4e6p_A Probable sorbitol dehyd 92.1 0.77 2.6E-05 40.2 9.6 84 132-227 7-93 (259)
457 4da9_A Short-chain dehydrogena 92.1 0.86 3E-05 40.5 10.0 61 132-193 28-92 (280)
458 3t7c_A Carveol dehydrogenase; 92.0 1.4 4.8E-05 39.5 11.4 61 132-193 27-102 (299)
459 3o26_A Salutaridine reductase; 92.0 1 3.5E-05 40.0 10.5 60 132-192 11-74 (311)
460 2vn8_A Reticulon-4-interacting 92.0 0.88 3E-05 42.3 10.4 47 130-181 181-229 (375)
461 3ek2_A Enoyl-(acyl-carrier-pro 91.9 0.51 1.7E-05 41.3 8.2 133 131-276 12-154 (271)
462 3uve_A Carveol dehydrogenase ( 91.9 0.9 3.1E-05 40.3 9.9 61 132-193 10-89 (286)
463 3t4x_A Oxidoreductase, short c 91.9 0.99 3.4E-05 39.7 10.1 83 132-227 9-96 (267)
464 4dqx_A Probable oxidoreductase 91.8 1.2 4E-05 39.6 10.5 125 133-276 27-160 (277)
465 3tqh_A Quinone oxidoreductase; 91.8 0.75 2.6E-05 41.7 9.4 50 127-181 147-198 (321)
466 1iy8_A Levodione reductase; ox 91.8 1.4 5E-05 38.5 11.0 60 133-193 13-77 (267)
467 3qlj_A Short chain dehydrogena 91.7 0.64 2.2E-05 42.2 8.9 61 132-193 26-99 (322)
468 3o38_A Short chain dehydrogena 91.7 1.1 3.9E-05 39.0 10.3 128 132-275 21-160 (266)
469 4fgs_A Probable dehydrogenase 91.6 0.67 2.3E-05 41.6 8.7 124 132-275 28-159 (273)
470 3a28_C L-2.3-butanediol dehydr 91.6 1.3 4.4E-05 38.6 10.5 60 133-193 2-66 (258)
471 3tox_A Short chain dehydrogena 91.5 0.49 1.7E-05 42.2 7.7 61 132-193 7-70 (280)
472 2qq5_A DHRS1, dehydrogenase/re 91.5 1.3 4.5E-05 38.6 10.4 60 133-193 5-67 (260)
473 1e7w_A Pteridine reductase; di 91.4 1.6 5.6E-05 38.8 11.1 59 133-192 9-72 (291)
474 1edo_A Beta-keto acyl carrier 91.4 1.4 4.7E-05 37.8 10.3 59 134-193 2-64 (244)
475 3gqv_A Enoyl reductase; medium 91.4 0.39 1.3E-05 44.8 7.1 46 131-181 163-210 (371)
476 1zsy_A Mitochondrial 2-enoyl t 91.3 0.76 2.6E-05 42.4 9.0 53 128-181 163-218 (357)
477 1xkq_A Short-chain reductase f 91.3 1 3.6E-05 39.8 9.6 60 133-193 6-71 (280)
478 1gu7_A Enoyl-[acyl-carrier-pro 91.0 0.56 1.9E-05 43.3 7.8 53 129-181 163-218 (364)
479 1spx_A Short-chain reductase f 91.0 0.56 1.9E-05 41.4 7.5 60 133-193 6-71 (278)
480 3osu_A 3-oxoacyl-[acyl-carrier 90.9 1.6 5.5E-05 37.7 10.4 128 133-276 4-141 (246)
481 1xg5_A ARPG836; short chain de 90.9 1.5 5.3E-05 38.5 10.4 61 132-193 31-96 (279)
482 3e03_A Short chain dehydrogena 90.9 1.4 4.7E-05 38.9 10.1 128 132-276 5-149 (274)
483 3rku_A Oxidoreductase YMR226C; 90.9 1.6 5.3E-05 39.1 10.5 61 132-193 32-100 (287)
484 4iin_A 3-ketoacyl-acyl carrier 90.9 0.96 3.3E-05 39.8 8.9 61 132-193 28-92 (271)
485 3gk3_A Acetoacetyl-COA reducta 90.8 1.4 4.9E-05 38.6 10.0 60 133-193 25-88 (269)
486 4dry_A 3-oxoacyl-[acyl-carrier 90.8 0.83 2.8E-05 40.7 8.5 61 132-193 32-96 (281)
487 3icc_A Putative 3-oxoacyl-(acy 90.7 0.93 3.2E-05 39.2 8.6 135 132-277 6-149 (255)
488 1x1t_A D(-)-3-hydroxybutyrate 90.7 1.3 4.6E-05 38.6 9.7 60 133-193 4-68 (260)
489 2p91_A Enoyl-[acyl-carrier-pro 90.7 2.3 8E-05 37.6 11.4 132 132-276 20-161 (285)
490 2bd0_A Sepiapterin reductase; 90.4 1.7 5.7E-05 37.3 9.9 60 133-193 2-71 (244)
491 3dmg_A Probable ribosomal RNA 90.4 0.86 2.9E-05 42.8 8.5 108 117-274 31-138 (381)
492 2h7i_A Enoyl-[acyl-carrier-pro 90.4 0.78 2.7E-05 40.4 7.8 133 132-275 6-148 (269)
493 3uf0_A Short-chain dehydrogena 90.4 1.5 5E-05 38.9 9.7 60 132-193 30-92 (273)
494 2x9g_A PTR1, pteridine reducta 90.4 2.3 7.8E-05 37.7 11.0 58 133-191 23-85 (288)
495 2wyu_A Enoyl-[acyl carrier pro 90.3 1.3 4.4E-05 38.8 9.2 132 132-276 7-147 (261)
496 3f9i_A 3-oxoacyl-[acyl-carrier 90.3 1.2 4.1E-05 38.4 8.9 82 131-228 12-96 (249)
497 2cfc_A 2-(R)-hydroxypropyl-COM 90.3 1.3 4.6E-05 38.0 9.2 60 133-193 2-65 (250)
498 2qhx_A Pteridine reductase 1; 90.3 1.8 6.1E-05 39.5 10.4 59 133-192 46-109 (328)
499 3i1j_A Oxidoreductase, short c 90.2 2.4 8.2E-05 36.4 10.8 57 132-189 13-73 (247)
500 2z1n_A Dehydrogenase; reductas 90.2 1.4 4.7E-05 38.5 9.3 60 133-193 7-71 (260)
No 1
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=1.2e-62 Score=480.62 Aligned_cols=304 Identities=37% Similarity=0.673 Sum_probs=275.4
Q ss_pred CeeeecchhhhcccccccccccCCchhhcCCcHHHHHHHHHhCCChHHHHHHHHHhCCCCCeeEEEcCCCCCHHHHHHHH
Q psy15212 1 MINAILREFLRKKGEIFKSKMYNIHESYWNYPIWWINQVKITYPNFFQWKNILDVGHKKPPLTLRINQRKTTLISYNKLL 80 (329)
Q Consensus 1 ~vNavlr~~~~~~~~~~~~~~~~~~~~~~s~P~w~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~RvN~~k~~~~~~~~~l 80 (329)
|||||||++.|+.+.+..... .+++ +||+|.||+++|.+.||+ +++++++++++++|+++|||++|++++++.+.|
T Consensus 117 fvN~vL~~~~r~~~~~~~~~~-~~~~-~~~~p~w~~~~~~~~~g~--~~~~~~~~~~~~~~~~~Rvn~~~~~~~~~~~~l 192 (429)
T 1sqg_A 117 LINGVLRQFQRQQEELLAEFN-ASDA-RYLHPSWLLKRLQKAYPE--QWQSIVEANNQRPPMWLRINRTHHSRDSWLALL 192 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TSGG-GGCSCHHHHHHHHHHCTT--THHHHHHHHTSCCCEEEEECTTTCCHHHHHHHH
T ss_pred hHHHHHHHHHHhhhcccccch-hhhh-hhcCcHHHHHHHHHHhhH--HHHHHHHhCCCCCCeEEEEcCCCCCHHHHHHHH
Confidence 699999999987655432221 2345 899999999999999996 789999999999999999999999999999999
Q ss_pred HHCCCeeEE--eCCceEEEcCCCCCCCCcccccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CE
Q psy15212 81 KKSGLETTI--IGPLAIKLHTPISISKIPKFFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IK 157 (329)
Q Consensus 81 ~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~ 157 (329)
.+.|+...+ +.++++.+..+..+..++.|..|.+++||.+|++++.++++++|++|||+|||||++|.++++.++ ++
T Consensus 193 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~ 272 (429)
T 1sqg_A 193 DEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQ 272 (429)
T ss_dssp HHTTCCEECCTTCTTEEEESSCCCGGGSTTGGGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCE
T ss_pred HhCCCceeecCCCCCEEEECCCCCcccChHHhCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCE
Confidence 999998765 467899998777889999999999999999999999999999999999999999999999999887 79
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCC
Q psy15212 158 LISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPD 237 (329)
Q Consensus 158 v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~ 237 (329)
|+|+|+++.+++.+++|++++|+.++++.+|+.... ..+.++.||+|++||||||+|+++++|+
T Consensus 273 v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~----------------~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~ 336 (429)
T 1sqg_A 273 VVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS----------------QWCGEQQFDRILLDAPCSATGVIRRHPD 336 (429)
T ss_dssp EEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTH----------------HHHTTCCEEEEEEECCCCCGGGTTTCTT
T ss_pred EEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhch----------------hhcccCCCCEEEEeCCCCcccccCCCcc
Confidence 999999999999999999999998899999998764 2223468999999999999999999999
Q ss_pred CcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhCCCcEEecC------CCcccCCCC
Q psy15212 238 IPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNS------PGQLLPTVN 311 (329)
Q Consensus 238 ~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~~~~~~~~~------~~~~~p~~~ 311 (329)
++|.++++++..+...|.++|++++++|||||+|||||||++++|||++|.+++++|+++++++. ..+++|+.
T Consensus 337 ~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~P~~- 415 (429)
T 1sqg_A 337 IKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGA- 415 (429)
T ss_dssp HHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTCEECSSBCSSSBSEEECCCT-
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCCCEEeCCCCCCCCeEEECCCC-
Confidence 99999999999999999999999999999999999999999999999999999999999998761 13689988
Q ss_pred CCCCCCeEEEEEEEec
Q psy15212 312 KKQDYDGFFYSLFQKR 327 (329)
Q Consensus 312 ~~~~~~gff~a~l~k~ 327 (329)
+++||||+|+|+|.
T Consensus 416 --~~~dGff~a~l~k~ 429 (429)
T 1sqg_A 416 --EEGDGFFYAKLIKK 429 (429)
T ss_dssp --TSCCSEEEEEEEC-
T ss_pred --CCCCceEEEEEEEC
Confidence 89999999999984
No 2
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.6e-62 Score=482.52 Aligned_cols=305 Identities=27% Similarity=0.451 Sum_probs=274.5
Q ss_pred CeeeecchhhhcccccccccccCCchhhcCCcHHHHHHHHHhCCChHHHHHHHHHhC-CCCCeeEEEcCCCCCHHHHHHH
Q psy15212 1 MINAILREFLRKKGEIFKSKMYNIHESYWNYPIWWINQVKITYPNFFQWKNILDVGH-KKPPLTLRINQRKTTLISYNKL 79 (329)
Q Consensus 1 ~vNavlr~~~~~~~~~~~~~~~~~~~~~~s~P~w~~~~~~~~~~~~~~~~~~l~~~~-~~~p~~~RvN~~k~~~~~~~~~ 79 (329)
|||||||++.|++..+.+.. ..++++||+|.||+++|.+.||+ ++++++++++ +++|+++|||++|++++++.+.
T Consensus 129 fvNgvL~~~~r~~~~~~~~~--~~~~~~~~~P~w~~~~~~~~~g~--~~~~~~~a~~~~~~~~~~Rvn~~k~~~~~~~~~ 204 (450)
T 2yxl_A 129 YFWDLLDKIFEYKPNPKNEL--EELEWKYLAPSWLIERVKGILGD--ETEDFFRSVNKRHEWISIRVNTLKANVEEVIGE 204 (450)
T ss_dssp HHHHHHHHHHTCCCCCCSHH--HHHHHHHTSCHHHHHHHHHHHGG--GHHHHHHHHHCCCCEEEEEECTTTCCHHHHHHH
T ss_pred chHHHHHHHhhccccccchh--hhhhhHhcCcHHHHHHHHHHhhH--HHHHHHHhcCCCCCCEEEEEcCCCCCHHHHHHH
Confidence 69999999998752221111 34678899999999999999995 8999999999 9999999999999999999999
Q ss_pred HHHCCCeeEE--eCCceEEEcCCCCCCCCcccccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--
Q psy15212 80 LKKSGLETTI--IGPLAIKLHTPISISKIPKFFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-- 155 (329)
Q Consensus 80 l~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-- 155 (329)
|+++|+...+ +.++++.+.....+..++.|.+|.+++||.+|++++.++++++|++|||+|||||++|.++++.++
T Consensus 205 L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~ 284 (450)
T 2yxl_A 205 LEEDGVEVVRSERVPTILKIKGPYNFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNK 284 (450)
T ss_dssp HHHTTCCEEECSSCTTEEEEESCCCTTSCHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTC
T ss_pred HHhCCccceecCccCceEEeCCCCCcccCchhhCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCC
Confidence 9999998765 567899986656789999999999999999999999999999999999999999999999999875
Q ss_pred CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCcccccccc
Q psy15212 156 IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRR 234 (329)
Q Consensus 156 ~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~ 234 (329)
++|+|+|+++.+++.+++|++++|+. ++++.+|+..+. ..+.++.||+|++||||||+|++++
T Consensus 285 ~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~----------------~~~~~~~fD~Vl~D~Pcsg~g~~~~ 348 (450)
T 2yxl_A 285 GKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP----------------EIIGEEVADKVLLDAPCTSSGTIGK 348 (450)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS----------------SSSCSSCEEEEEEECCCCCGGGTTT
T ss_pred CEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc----------------hhhccCCCCEEEEcCCCCCCeeecc
Confidence 69999999999999999999999995 899999998764 2123368999999999999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhCCCcEEecCC-----------
Q psy15212 235 NPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNSP----------- 303 (329)
Q Consensus 235 ~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~~~~~~~~~~----------- 303 (329)
+|+++|.++++++..+...|.++|+++.++|||||+|+|+|||++++|||++|.+|+++|+++++++..
T Consensus 349 ~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~ 428 (450)
T 2yxl_A 349 NPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLKSPYDPGFLEGT 428 (450)
T ss_dssp STTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCEECCCCSSSEECSSTTC
T ss_pred ChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCEEeecccccccccCCCe
Confidence 999999999999999999999999999999999999999999999999999999999999999987754
Q ss_pred CcccCCCCCCCCCCeEEEEEEEecC
Q psy15212 304 GQLLPTVNKKQDYDGFFYSLFQKRK 328 (329)
Q Consensus 304 ~~~~p~~~~~~~~~gff~a~l~k~~ 328 (329)
.+++|+. +++||||+|+|+|++
T Consensus 429 ~~~~P~~---~~~dGff~a~l~k~~ 450 (450)
T 2yxl_A 429 MRAWPHR---HSTIGFFYALLEKSK 450 (450)
T ss_dssp EEECHHH---HSSCCEEEEEEECC-
T ss_pred EEECCCC---CCCCceEEEEEEECC
Confidence 2578887 899999999999964
No 3
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=1.6e-59 Score=441.20 Aligned_cols=281 Identities=31% Similarity=0.424 Sum_probs=248.7
Q ss_pred CCchhhcCCcHHHHHHHHHhCCChHHHHHHHHHhCCCCCeeEEEcCCCCCHHHHHHHHHHCCCeeEEe--CCceEEEcC-
Q psy15212 23 NIHESYWNYPIWWINQVKITYPNFFQWKNILDVGHKKPPLTLRINQRKTTLISYNKLLKKSGLETTII--GPLAIKLHT- 99 (329)
Q Consensus 23 ~~~~~~~s~P~w~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~RvN~~k~~~~~~~~~l~~~g~~~~~~--~~~~~~~~~- 99 (329)
..++++||+|.||+++|.+.||+ +++++++++++++|+++|||++|++++++.+.|++.|+...+. .++++.+..
T Consensus 8 ~~l~~~~~~P~w~~~~~~~~~g~--~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~ 85 (315)
T 1ixk_A 8 LDKLLRLGYSKLFADRYFQLWGE--RAIRIAEAMEKPLPRCFRVNTLKISVQDLVKRLNKKGFQFKRVPWAKEGFCLTRE 85 (315)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHTT--HHHHHHHHTTSCCCCEEEECTTTSCHHHHHHHHHHTTCEEEEETTEEEEEEEEEC
T ss_pred HHHHHHhCCcHHHHHHHHHHccH--HHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeECCCCCceEEEeCC
Confidence 35788999999999999999996 8999999999999999999999999999999999999987664 467888753
Q ss_pred CCCCCCCcccccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHH
Q psy15212 100 PISISKIPKFFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKR 177 (329)
Q Consensus 100 ~~~~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~ 177 (329)
+..+..++.|.+|++++||.+|++++.++++++|++|||+|||||++|.++++.++ ++|+|+|+++.+++.+++|+++
T Consensus 86 ~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~ 165 (315)
T 1ixk_A 86 PFSITSTPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSR 165 (315)
T ss_dssp SSCGGGSHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCcccChhHhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999999999999999999874 7999999999999999999999
Q ss_pred cCCc-eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHH
Q psy15212 178 LNLK-ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCK 256 (329)
Q Consensus 178 ~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~ 256 (329)
+|+. ++++++|+..+. . ..+.||+|++||||||+|+++++|+++|.++.+++..+...|.+
T Consensus 166 ~g~~~v~~~~~D~~~~~----------------~--~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~ 227 (315)
T 1ixk_A 166 LGVLNVILFHSSSLHIG----------------E--LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMR 227 (315)
T ss_dssp HTCCSEEEESSCGGGGG----------------G--GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHH
T ss_pred hCCCeEEEEECChhhcc----------------c--ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHH
Confidence 9995 899999998765 1 24579999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhCCCcEEecCC---------------------CcccCCCCCCCC
Q psy15212 257 ILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNSP---------------------GQLLPTVNKKQD 315 (329)
Q Consensus 257 lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~~~~~~~~~~---------------------~~~~p~~~~~~~ 315 (329)
+|++++++|||||+|+|||||++++|||++|+++++++ +++.++.+ .+++|+. ++
T Consensus 228 ~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~---~~ 303 (315)
T 1ixk_A 228 LLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNF-DVELLPLKYGEPALTNPFGIELSEEIKNARRLYPDV---HE 303 (315)
T ss_dssp HHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHS-SEEEECCCSSEECCSSGGGCCCCGGGGGSEEECTTT---SS
T ss_pred HHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcC-CCEEecCCccccCcccccccccccccCCEEEECCCC---CC
Confidence 99999999999999999999999999999999999987 57766543 1467887 89
Q ss_pred CCeEEEEEEEec
Q psy15212 316 YDGFFYSLFQKR 327 (329)
Q Consensus 316 ~~gff~a~l~k~ 327 (329)
+||||+|+|+|.
T Consensus 304 ~dGfF~A~l~k~ 315 (315)
T 1ixk_A 304 TSGFFIAKIRKL 315 (315)
T ss_dssp SCSEEEEEEEEC
T ss_pred cccEEEEEEEEC
Confidence 999999999985
No 4
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=6.2e-60 Score=462.88 Aligned_cols=276 Identities=24% Similarity=0.351 Sum_probs=250.9
Q ss_pred CCcHHHHHHHHHhCCChHHHHHHHHHhCCC-CCeeEEEcCCCCCHHHHHHHHHHCCCeeEEeCCceEEEcCCCCCCCCcc
Q psy15212 30 NYPIWWINQVKITYPNFFQWKNILDVGHKK-PPLTLRINQRKTTLISYNKLLKKSGLETTIIGPLAIKLHTPISISKIPK 108 (329)
Q Consensus 30 s~P~w~~~~~~~~~~~~~~~~~~l~~~~~~-~p~~~RvN~~k~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 108 (329)
.+|.||+++|.+.||+ ++++++++++++ +|+++|||++|++++++.+.| .......+++++++++.....+..+++
T Consensus 1 ~lP~w~~~~~~~~~g~--e~~~~l~a~~~~~~~~~lRvN~lk~~~~~~~~~l-~~~~~~~~~~~~g~~l~~~~~~~~~~~ 77 (464)
T 3m6w_A 1 MLPKAFLSRMAELLGE--EFPAFLKALTEGKRTYGLRVNTLKLPPEAFQRIS-PWPLRPIPWCQEGFYYPEEARPGPHPF 77 (464)
T ss_dssp CCCHHHHHHHHHHHGG--GHHHHHHHHHTSCCCCEEEECTTTCCHHHHHHHC-SSCCEEETTEEEEEECCTTCCCSSSHH
T ss_pred CCcHHHHHHHHHHHHH--HHHHHHHHcCCCCCCeEEEEcCCCCCHHHHHHHc-CCCceecCCCCceEEECCCCCcccChH
Confidence 3899999999999997 799999999999 999999999999999998777 222334456678999886666889999
Q ss_pred cccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCceEEEe
Q psy15212 109 FFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLKATLIL 186 (329)
Q Consensus 109 ~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~ 186 (329)
|.+|.+++||++|++++.++++++|++|||+|||||++|+++|++++ ++|+|+|+++.+++.+++|++++|+.+.+++
T Consensus 78 ~~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~ 157 (464)
T 3m6w_A 78 FYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQ 157 (464)
T ss_dssp HHTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEEC
T ss_pred HhCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEE
Confidence 99999999999999999999999999999999999999999999876 7999999999999999999999999888999
Q ss_pred cCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCC
Q psy15212 187 SDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLK 266 (329)
Q Consensus 187 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lk 266 (329)
+|+..+. .. ..+.||+|++||||||+|+++++|++.|.++++++..+...|.++|++|+++||
T Consensus 158 ~Da~~l~----------------~~-~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk 220 (464)
T 3m6w_A 158 APPRALA----------------EA-FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLG 220 (464)
T ss_dssp SCHHHHH----------------HH-HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCHHHhh----------------hh-ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9988764 11 246899999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEcCCCCccccHHHHHHHHhhCCCcEEecCC----------------------CcccCCCCCCCCCCeEEEEEE
Q psy15212 267 PGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNSP----------------------GQLLPTVNKKQDYDGFFYSLF 324 (329)
Q Consensus 267 pgG~lvysTCS~~~~Ene~vv~~~l~~~~~~~~~~~~----------------------~~~~p~~~~~~~~~gff~a~l 324 (329)
|||+|||||||++++|||++|++|+++|+++++++.. .+++|+. +++||||+|+|
T Consensus 221 pGG~LvysTCs~~~eEne~vv~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~---~~~dGfF~A~l 297 (464)
T 3m6w_A 221 PGGVLVYSTCTFAPEENEGVVAHFLKAHPEFRLEDARLHPLFAPGVPEWGEGNPELLKTARLWPHR---LEGEGHFLARF 297 (464)
T ss_dssp EEEEEEEEESCCCGGGTHHHHHHHHHHCTTEEEECCCCSTTSEECCGGGTTTCGGGGGSEEECTTT---SSSSCEEEEEE
T ss_pred CCcEEEEEeccCchhcCHHHHHHHHHHCCCcEEEecccccccccCcccccccccccCCeEEECCCC---CCceeEEEEEE
Confidence 9999999999999999999999999999999887752 1578887 89999999999
Q ss_pred EecC
Q psy15212 325 QKRK 328 (329)
Q Consensus 325 ~k~~ 328 (329)
+|.+
T Consensus 298 ~k~~ 301 (464)
T 3m6w_A 298 RKEG 301 (464)
T ss_dssp EECS
T ss_pred EECC
Confidence 9974
No 5
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=8.1e-59 Score=458.31 Aligned_cols=280 Identities=22% Similarity=0.382 Sum_probs=247.2
Q ss_pred hcCCcHHHHHHHHHhCCChH-HHHHHHHHhCCCCCeeEEEcCCCCCHHHHHHHHHHCCCeeEE--eCCceEEEcCC----
Q psy15212 28 YWNYPIWWINQVKITYPNFF-QWKNILDVGHKKPPLTLRINQRKTTLISYNKLLKKSGLETTI--IGPLAIKLHTP---- 100 (329)
Q Consensus 28 ~~s~P~w~~~~~~~~~~~~~-~~~~~l~~~~~~~p~~~RvN~~k~~~~~~~~~l~~~g~~~~~--~~~~~~~~~~~---- 100 (329)
.|++|.||+++|.+.||+ + +++++++++++++|+++|||++|++++++.+.|.+.|+...+ ++++++.+...
T Consensus 5 ~~~~P~~~~~~~~~~~g~-~~~~~~~~~a~~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (479)
T 2frx_A 5 TVYFPDAFLTQMREAMPS-TLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDA 83 (479)
T ss_dssp --CCCHHHHHHHGGGCC-----CHHHHHHHTSCCCCCEEECTTTCCHHHHHHHHGGGCCCCCEETTEEEEEC--------
T ss_pred cccCcHHHHHHHHHHcCc-cHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHcCCceeecCCCCceEEEecCcccc
Confidence 478999999999999997 4 578999999999999999999999999999999999987655 45678877532
Q ss_pred CCCCCCcccccceEEEechhHHHHhhhcCCC--CCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHH
Q psy15212 101 ISISKIPKFFNGFCSIQDAAAQLAAPLLDIR--SGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLK 176 (329)
Q Consensus 101 ~~~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~--~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~ 176 (329)
..+..+++|..|.+++||++||+++.+++++ +|++|||+|||||+||+++|++++ +.|+|+|+++.|++.+++|++
T Consensus 84 ~~~~~~~~~~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~ 163 (479)
T 2frx_A 84 LPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANIS 163 (479)
T ss_dssp -CGGGSHHHHTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHH
T ss_pred cCcccChHHhCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 2678899999999999999999999999988 999999999999999999999875 799999999999999999999
Q ss_pred HcCCc-eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHH
Q psy15212 177 RLNLK-ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSC 255 (329)
Q Consensus 177 ~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~ 255 (329)
++|+. +.++++|+..+. .. ..+.||+|++||||||+|+++++|++.|.|+++++..+...|.
T Consensus 164 r~g~~nv~~~~~D~~~~~----------------~~-~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~ 226 (479)
T 2frx_A 164 RCGISNVALTHFDGRVFG----------------AA-VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQR 226 (479)
T ss_dssp HHTCCSEEEECCCSTTHH----------------HH-STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHH
T ss_pred HcCCCcEEEEeCCHHHhh----------------hh-ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHH
Confidence 99996 899999998764 11 2468999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhCCCc-EEecCC---------------CcccCCCCCCCCCCeE
Q psy15212 256 KILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDS-IRLNSP---------------GQLLPTVNKKQDYDGF 319 (329)
Q Consensus 256 ~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~~~~-~~~~~~---------------~~~~p~~~~~~~~~gf 319 (329)
++|++|+++|||||+|||||||++++|||++|++++++++++ .+++.. .+++|+. +++|||
T Consensus 227 ~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~r~~P~~---~~~dGf 303 (479)
T 2frx_A 227 ELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQI---YDCEGF 303 (479)
T ss_dssp HHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHSTTTEEECCCTTSSTTGGGGBCTTSCEEECTTT---TTSCCE
T ss_pred HHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCCCceecccccccccccccccccCCeEEECCCC---CCcCcc
Confidence 999999999999999999999999999999999999999986 443321 1568887 899999
Q ss_pred EEEEEEecC
Q psy15212 320 FYSLFQKRK 328 (329)
Q Consensus 320 f~a~l~k~~ 328 (329)
|+|+|+|.+
T Consensus 304 F~A~l~k~~ 312 (479)
T 2frx_A 304 FVARLRKTQ 312 (479)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEEcC
Confidence 999999975
No 6
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=2.2e-59 Score=458.42 Aligned_cols=271 Identities=22% Similarity=0.288 Sum_probs=242.8
Q ss_pred cCCcHHHHHHHHHhCCChHHHHHHHHHhCCCCC-eeEEEcCCCCCHHHHHHHHHHCCCe---eEEeCCceEEEcCCCCCC
Q psy15212 29 WNYPIWWINQVKITYPNFFQWKNILDVGHKKPP-LTLRINQRKTTLISYNKLLKKSGLE---TTIIGPLAIKLHTPISIS 104 (329)
Q Consensus 29 ~s~P~w~~~~~~~~~~~~~~~~~~l~~~~~~~p-~~~RvN~~k~~~~~~~~~l~~~g~~---~~~~~~~~~~~~~~~~~~ 104 (329)
+++|.||+++|.+.||+ +++++++++++++| +++|||++|+ +++.+.+ ...++ ..++++++++ . ..+.
T Consensus 6 ~~~P~w~~~~~~~~~g~--e~~~~~~a~~~~~~~~~lRvN~lk~--~~~~~~~-~~~~~~~~~~~~~~~~~~-~--~~~~ 77 (456)
T 3m4x_A 6 TTLPQQFIKKYRLLLGE--EASDFFSALEQGSVKKGFRWNPLKP--AGLDMVQ-TYHSEELQPAPYSNEGFL-G--TVNG 77 (456)
T ss_dssp -CCCHHHHHHHHHHHGG--GHHHHHHHHHHCCCCCEEECCTTST--THHHHHH-HHTCSSCCBCTTCTTEEE-S--CCCT
T ss_pred hhChHHHHHHHHHHhCH--HHHHHHHHcCCCCCCcEEEEcCccH--HHHHHhc-CCcccccCCCCCCcceEE-c--CCCC
Confidence 68999999999999997 69999999999999 9999999998 6665543 22333 5567788888 3 2358
Q ss_pred CCcccccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc-
Q psy15212 105 KIPKFFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK- 181 (329)
Q Consensus 105 ~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~- 181 (329)
.+++|.+|.+++||++||+++.++++++|++|||+|||||+||+++|++++ ++|+|+|+++.+++.+++|++++|+.
T Consensus 78 ~~~~~~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~n 157 (456)
T 3m4x_A 78 KSFLHQAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSN 157 (456)
T ss_dssp TSHHHHTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSS
T ss_pred CChHHhCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCc
Confidence 899999999999999999999999999999999999999999999999865 79999999999999999999999997
Q ss_pred eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHH
Q psy15212 182 ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL 261 (329)
Q Consensus 182 v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a 261 (329)
+.++++|+..+. .. .++.||+||+||||||+|+++++|+++|.++.+++..+...|+++|++|
T Consensus 158 v~v~~~Da~~l~----------------~~-~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a 220 (456)
T 3m4x_A 158 AIVTNHAPAELV----------------PH-FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSA 220 (456)
T ss_dssp EEEECCCHHHHH----------------HH-HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCHHHhh----------------hh-ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHH
Confidence 889999988764 11 2468999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCEEEEEcCCCCccccHHHHHHHHhhCCCcEEecCC---------------------CcccCCCCCCCCCCeEE
Q psy15212 262 WKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNSP---------------------GQLLPTVNKKQDYDGFF 320 (329)
Q Consensus 262 ~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~~~~~~~~~~---------------------~~~~p~~~~~~~~~gff 320 (329)
+++|||||+|||||||++++|||++|++|+++|+ +++++.+ .+++|+. +++||||
T Consensus 221 ~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~---~~~dGFF 296 (456)
T 3m4x_A 221 IKMLKNKGQLIYSTCTFAPEENEEIISWLVENYP-VTIEEIPLTQSVSSGRSEWGSVAGLEKTIRIWPHK---DQGEGHF 296 (456)
T ss_dssp HHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS-EEEECCCCSSCCEECCGGGSSSTTGGGSEEECTTT---SSSSCEE
T ss_pred HHhcCCCcEEEEEEeecccccCHHHHHHHHHhCC-CEEEeccccccccccccccccccccCCeEEECCCC---CCCcCeE
Confidence 9999999999999999999999999999999998 8887642 1578887 8999999
Q ss_pred EEEEEecC
Q psy15212 321 YSLFQKRK 328 (329)
Q Consensus 321 ~a~l~k~~ 328 (329)
+|+|+|.+
T Consensus 297 ~A~l~k~~ 304 (456)
T 3m4x_A 297 VAKLTFHG 304 (456)
T ss_dssp EEEEEECS
T ss_pred EEEEEECC
Confidence 99999974
No 7
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=2.2e-55 Score=411.53 Aligned_cols=252 Identities=24% Similarity=0.308 Sum_probs=207.5
Q ss_pred CCCCCeeEEEcCCCCCHHHHHHHHHHCCCeeEEe--------------------CCceEEEcCCCCCCCCcccccceEEE
Q psy15212 57 HKKPPLTLRINQRKTTLISYNKLLKKSGLETTII--------------------GPLAIKLHTPISISKIPKFFNGFCSI 116 (329)
Q Consensus 57 ~~~~p~~~RvN~~k~~~~~~~~~l~~~g~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~G~~~~ 116 (329)
..++|+++|||++|++++++.+.|+++|+...+. .++++.++....+..+++|++|.+++
T Consensus 7 ~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~G~~~~ 86 (309)
T 2b9e_A 7 ASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLIL 86 (309)
T ss_dssp --CCCEEEEECTTTCCHHHHHHHHHHTTCEEEEECSSHHHHHTCCTTEEEECSSSTTEEEECTTCCCTTSHHHHTTSEEE
T ss_pred CCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeeccccccccccccccccccccCCCceEEeCCCCCcccChHHHCCeEEE
Confidence 4578999999999999999999999999987653 24567776666789999999999999
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccc
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKIN 193 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~ 193 (329)
||++||+++.++++++|++|||+|||||+||+++|++++ ++|+|+|+++.+++.+++|++++|+. ++++.+|+..+.
T Consensus 87 Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~ 166 (309)
T 2b9e_A 87 QDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVS 166 (309)
T ss_dssp CCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSC
T ss_pred ECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcC
Confidence 999999999999999999999999999999999999864 79999999999999999999999986 899999988764
Q ss_pred hhhhhhhhcccccccccccC-CCCCCEEEEccCCccccccccCCCCcccC--ChhHHHHHHHHHHHHHHHHHhcCCCCCE
Q psy15212 194 LKKLYIDINKKTNNRFRFYK-NKYFDRILADLPCTGSGVVRRNPDIPWLR--RKNDIKKLSKYSCKILNNLWKMLKPGGK 270 (329)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~-~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~--~~~~~~~l~~~q~~lL~~a~~~LkpgG~ 270 (329)
.... ...||+||+||||||+|+++++|+++|.+ +++++..+...|.++|++|+++++ ||+
T Consensus 167 ----------------~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~ 229 (309)
T 2b9e_A 167 ----------------PSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQR 229 (309)
T ss_dssp ----------------TTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCE
T ss_pred ----------------ccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCE
Confidence 1000 14799999999999999999999998854 678899999999999999999987 999
Q ss_pred EEEEcCCCCccccHHHHHHHHhhCCC-cEEecCC-----------------CcccCCCCCCCCCCeEEEEEEEecC
Q psy15212 271 LLFVTCSLWFEESEEQAIIFSKNHKD-SIRLNSP-----------------GQLLPTVNKKQDYDGFFYSLFQKRK 328 (329)
Q Consensus 271 lvysTCS~~~~Ene~vv~~~l~~~~~-~~~~~~~-----------------~~~~p~~~~~~~~~gff~a~l~k~~ 328 (329)
|||||||++++|||++|++||++|++ +++++.. .+++|+. +++||||+|+|+|.+
T Consensus 230 lvYsTCs~~~~Ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~---~~~dGfF~A~l~k~~ 302 (309)
T 2b9e_A 230 LVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPET---TLSSGFFVAVIERVE 302 (309)
T ss_dssp EEEEESCCCGGGTHHHHHHHHTTSTTTEEECCCCTTCCCBCCSSSTTGGGSEEECHHH---HSSCSEEEEEEEEC-
T ss_pred EEEECCCCChHHhHHHHHHHHHhCCCcEEEeccccccccccccccCCCCCeEEECCCC---CCCCCeEEEEEEECC
Confidence 99999999999999999999999998 8876532 1356766 799999999999975
No 8
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=5.6e-55 Score=415.04 Aligned_cols=272 Identities=20% Similarity=0.261 Sum_probs=226.7
Q ss_pred HHHHHHHhCCChHHHHHHHHHhCCCCCeeEEEcCCCCCHHHHHHHHHHCCCeeE----------------Ee--------
Q psy15212 35 WINQVKITYPNFFQWKNILDVGHKKPPLTLRINQRKTTLISYNKLLKKSGLETT----------------II-------- 90 (329)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~RvN~~k~~~~~~~~~l~~~g~~~~----------------~~-------- 90 (329)
|.+++.+.||+ +|..+..+++.|++..+|+|+.+ +.+++.+.|+..|..-. ..
T Consensus 23 Fd~~Y~~~~G~--~W~~~r~aL~~~~~~~a~vN~f~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 99 (359)
T 4fzv_A 23 FDMTYSVQFGD--LWPSIRVSLLSEQKYGALVNNFA-AWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWA 99 (359)
T ss_dssp HHHHHHHHHGG--GHHHHHHHHTSCCCCEEEECTTS-CHHHHHHHHHHTTCEEHHHHHHHTTTCCC-----CCSSCHHHH
T ss_pred HHHHHHHHhhh--hhHHHHHHHcCcchhEEEeccCC-ChHHHHHHHHhccCccchhhhhcccccccccccccCCCccccc
Confidence 77788888997 99999999999999999999985 67888888888775420 00
Q ss_pred CCce--EEEcCCCCCCCCcccccc-----eEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEe
Q psy15212 91 GPLA--IKLHTPISISKIPKFFNG-----FCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVD 162 (329)
Q Consensus 91 ~~~~--~~~~~~~~~~~~~~~~~G-----~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD 162 (329)
.+.. +.+.....+..+|.|.+| .+|+||++||+++.+|+++||++|||+||||||||+|+|+++. +.|+|+|
T Consensus 100 ~~~~l~~~~~~~g~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D 179 (359)
T 4fzv_A 100 CSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAAND 179 (359)
T ss_dssp SCSSCCEEECCTTCCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEEC
T ss_pred CCccceEEecCCCChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEc
Confidence 0001 222233456777777765 5889999999999999999999999999999999999999877 7999999
Q ss_pred CChhHHHHHHHHHHHcCC-------ceEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccc--cccc
Q psy15212 163 NNLSRLNMISENLKRLNL-------KATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGS--GVVR 233 (329)
Q Consensus 163 ~~~~rl~~l~~n~~~~g~-------~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~--G~~~ 233 (329)
+++.|++.+++|++++|+ .+.+...|++.+. . ...+.||+||+||||||+ |+++
T Consensus 180 ~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~----------------~-~~~~~fD~VLlDaPCSg~g~g~~r 242 (359)
T 4fzv_A 180 LSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWG----------------E-LEGDTYDRVLVDVPCTTDRHSLHE 242 (359)
T ss_dssp SCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHH----------------H-HSTTCEEEEEEECCCCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcc----------------h-hccccCCEEEECCccCCCCCcccc
Confidence 999999999999999875 2678889988764 1 235789999999999997 7889
Q ss_pred cCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhCCCcEEecC-----C-----
Q psy15212 234 RNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNS-----P----- 303 (329)
Q Consensus 234 ~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~~~~~~~~~-----~----- 303 (329)
++|+++|.++++++..+..+|.+||.+|+++|||||+|||||||++++|||+||++||++++++..++. .
T Consensus 243 ~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~~ 322 (359)
T 4fzv_A 243 EENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRV 322 (359)
T ss_dssp CTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHHHHCCCEEECCCHHHHHH
T ss_pred cChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCCCcccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999998876433221 0
Q ss_pred --------------CcccCCCCCCCCCCeEEEEEEEecC
Q psy15212 304 --------------GQLLPTVNKKQDYDGFFYSLFQKRK 328 (329)
Q Consensus 304 --------------~~~~p~~~~~~~~~gff~a~l~k~~ 328 (329)
.+++|+.. .++||||+|+|+|.+
T Consensus 323 ~~~~~~~~~~~~~g~r~~P~~~--~~~gGFFiA~L~KvS 359 (359)
T 4fzv_A 323 FMDTFCFFSSCQVGELVIPNLM--ANFGPMYFCKMRRLT 359 (359)
T ss_dssp HTTTCEECTTCSSSEEEECBTT--BCCCCEEEEEEEECC
T ss_pred cccccccCccccceEEECCCCC--CCCCCEEEEEEEECC
Confidence 14778751 467889999999974
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=5.3e-49 Score=362.47 Aligned_cols=249 Identities=25% Similarity=0.426 Sum_probs=204.5
Q ss_pred HHHhCCCCCeeEEEcCCCCCHHHHHHHHHHCCCeeEE-eCCceEEE-cCCCCCCCCcccccceEEEechhHHHHhhhcCC
Q psy15212 53 LDVGHKKPPLTLRINQRKTTLISYNKLLKKSGLETTI-IGPLAIKL-HTPISISKIPKFFNGFCSIQDAAAQLAAPLLDI 130 (329)
Q Consensus 53 l~~~~~~~p~~~RvN~~k~~~~~~~~~l~~~g~~~~~-~~~~~~~~-~~~~~~~~~~~~~~G~~~~Qd~~s~l~~~~l~~ 130 (329)
++++++++|+++|||++|++++++.+.|++.|+...+ +.++++.+ ..+..+..++.|..|++++||.+|++++.++++
T Consensus 2 m~~~~~~~~~~~rvn~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~ 81 (274)
T 3ajd_A 2 MIVYKGEKMQFIRVNTLKINPEVLKKRLENKGVVLEKTFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVLNP 81 (274)
T ss_dssp -------CCEEEEECTTTCCHHHHHHHHHTTTCEEEECSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGGGHHHHHHCC
T ss_pred hhhhCCCCCeEEEEeCCCCCHHHHHHHHHHCCCeecCCCCCceEEEecCCCCcccChhhhCCeEEEeCHHHHHHHHHhCC
Confidence 4566789999999999999999999999999987764 55688888 455678899999999999999999999999999
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhcccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
++|++|||+|||||++|.++++.++ ++|+|+|+++.+++.+++|++++|+. ++++.+|+..+.
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~-------------- 147 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYK-------------- 147 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHH--------------
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcc--------------
Confidence 9999999999999999999999764 79999999999999999999999985 899999988764
Q ss_pred ccccc--CCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHH
Q psy15212 208 RFRFY--KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEE 285 (329)
Q Consensus 208 ~~~~~--~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~ 285 (329)
... ..+.||+|++||||||+|+++++| .++.+++..+...|.++|++++++|||||+|+|+|||++++|||+
T Consensus 148 --~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p----~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~ 221 (274)
T 3ajd_A 148 --DYLLKNEIFFDKILLDAPCSGNIIKDKNR----NVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEE 221 (274)
T ss_dssp --HHHHHTTCCEEEEEEEECCC----------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHH
T ss_pred --hhhhhccccCCEEEEcCCCCCCcccccCC----CCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHH
Confidence 100 146899999999999999999998 456778888888999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCcEEecCC-----------------CcccCCCCCCCCCCeEEEEEEEec
Q psy15212 286 QAIIFSKNHKDSIRLNSP-----------------GQLLPTVNKKQDYDGFFYSLFQKR 327 (329)
Q Consensus 286 vv~~~l~~~~~~~~~~~~-----------------~~~~p~~~~~~~~~gff~a~l~k~ 327 (329)
+|++++++|+++++++.. .+++|+. + + ||+|+|+|.
T Consensus 222 ~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~---~--~-ff~a~l~k~ 274 (274)
T 3ajd_A 222 VIKYILQKRNDVELIIIKANEFKGINIKEGYIKGTLRVFPPN---E--P-FFIAKLRKI 274 (274)
T ss_dssp HHHHHHHHCSSEEEECCCSTTCTTSCEEECSSTTCEEECTTS---C--C-EEEEEEEEC
T ss_pred HHHHHHHhCCCcEEecCccccccCcccccccCCCeEEECCCC---C--C-EEEEEEEEC
Confidence 999999999999887653 1356764 3 4 999999984
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.84 E-value=8.7e-21 Score=182.62 Aligned_cols=164 Identities=19% Similarity=0.242 Sum_probs=132.7
Q ss_pred CCCcccccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceE
Q psy15212 104 SKIPKFFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKAT 183 (329)
Q Consensus 104 ~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~ 183 (329)
.....++.|.|..|..+..++..++ ++|++|||+|||+|++++++|.. ++.|+|+|+|+.+++.+++|++.+|+..+
T Consensus 188 d~~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~~ 264 (393)
T 4dmg_A 188 PLALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRVD 264 (393)
T ss_dssp ETTTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCCE
T ss_pred echhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCCc
Confidence 3456788999999999999888765 46899999999999999999985 55699999999999999999999999867
Q ss_pred EEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHh
Q psy15212 184 LILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWK 263 (329)
Q Consensus 184 ~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~ 263 (329)
+.++|+.... .... +.||+|++||||.. .+...+....+.+.+++..+.+
T Consensus 265 ~~~~D~~~~l----------------~~~~-~~fD~Ii~dpP~f~-------------~~~~~~~~~~~~~~~ll~~a~~ 314 (393)
T 4dmg_A 265 IRHGEALPTL----------------RGLE-GPFHHVLLDPPTLV-------------KRPEELPAMKRHLVDLVREALR 314 (393)
T ss_dssp EEESCHHHHH----------------HTCC-CCEEEEEECCCCCC-------------SSGGGHHHHHHHHHHHHHHHHH
T ss_pred EEEccHHHHH----------------HHhc-CCCCEEEECCCcCC-------------CCHHHHHHHHHHHHHHHHHHHH
Confidence 7789987753 1122 34999999999852 2344677778888999999999
Q ss_pred cCCCCCEEEEEcCCCCccccH--HHHHHHHhh-CCCcEEe
Q psy15212 264 MLKPGGKLLFVTCSLWFEESE--EQAIIFSKN-HKDSIRL 300 (329)
Q Consensus 264 ~LkpgG~lvysTCS~~~~Ene--~vv~~~l~~-~~~~~~~ 300 (329)
+|+|||+|+|+|||.+..+++ +++.....+ ...++.+
T Consensus 315 ~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~ 354 (393)
T 4dmg_A 315 LLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVH 354 (393)
T ss_dssp TEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred hcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEE
Confidence 999999999999999988877 566665543 3344443
No 11
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.77 E-value=8e-18 Score=152.61 Aligned_cols=189 Identities=17% Similarity=0.120 Sum_probs=125.3
Q ss_pred cceEEEechh-------HHHHhhhcCCC-CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-
Q psy15212 111 NGFCSIQDAA-------AQLAAPLLDIR-SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK- 181 (329)
Q Consensus 111 ~G~~~~Qd~~-------s~l~~~~l~~~-~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~- 181 (329)
.+..+.|+.. +.+.+.++.+. ++.+|||+|||+|..+..+++..+.+|+|+|+++.+++.+++|++.+++.
T Consensus 20 ~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~ 99 (259)
T 3lpm_A 20 ENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLED 99 (259)
T ss_dssp TTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTT
T ss_pred CCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcc
Confidence 4555567776 78888888888 89999999999999999999876579999999999999999999999985
Q ss_pred -eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccc-cccccCCCCcccCChhHHHHHHHHHHHHHH
Q psy15212 182 -ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGS-GVVRRNPDIPWLRRKNDIKKLSKYSCKILN 259 (329)
Q Consensus 182 -v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~-G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~ 259 (329)
++++++|+.++. ..+..++||+|++||||... +.-...|+..+.... .........+++
T Consensus 100 ~v~~~~~D~~~~~----------------~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~---~~~~~~~~~~l~ 160 (259)
T 3lpm_A 100 QIEIIEYDLKKIT----------------DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIAR---HEVMCTLEDTIR 160 (259)
T ss_dssp TEEEECSCGGGGG----------------GTSCTTCEEEEEECCCC--------------------------HHHHHHHH
T ss_pred cEEEEECcHHHhh----------------hhhccCCccEEEECCCCCCCccccCCCCchHHHhhh---ccccCCHHHHHH
Confidence 899999998765 22245789999999999765 211222221111100 011123457899
Q ss_pred HHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEEEec
Q psy15212 260 NLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 327 (329)
Q Consensus 260 ~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l~k~ 327 (329)
.+.++|||||++++. ++.+....+...++.+ ++..... ..+.|.. .....+++..++|.
T Consensus 161 ~~~~~LkpgG~l~~~----~~~~~~~~~~~~l~~~-~~~~~~~-~~v~~~~---~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 161 VAASLLKQGGKANFV----HRPERLLDIIDIMRKY-RLEPKRI-QFVHPRS---DREANTVLVEGIKD 219 (259)
T ss_dssp HHHHHEEEEEEEEEE----ECTTTHHHHHHHHHHT-TEEEEEE-EEEESST---TSCCSEEEEEEEET
T ss_pred HHHHHccCCcEEEEE----EcHHHHHHHHHHHHHC-CCceEEE-EEeecCC---CCCcEEEEEEEEeC
Confidence 999999999999985 3344455555666665 4433221 1122322 33345566666554
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.77 E-value=9.2e-19 Score=167.95 Aligned_cols=164 Identities=20% Similarity=0.187 Sum_probs=129.1
Q ss_pred CCcccccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eE
Q psy15212 105 KIPKFFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-AT 183 (329)
Q Consensus 105 ~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~ 183 (329)
....+..|+|..|.....+++.+ +|++|||+|||+|+++.++|.. ..+|+++|+++.+++.+++|++.+|+. ++
T Consensus 186 ~~~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~ 260 (382)
T 1wxx_A 186 LRAGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVR 260 (382)
T ss_dssp CSTTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEE
T ss_pred chhcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCce
Confidence 34567778888888887776654 6889999999999999999987 569999999999999999999999987 89
Q ss_pred EEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHh
Q psy15212 184 LILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWK 263 (329)
Q Consensus 184 ~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~ 263 (329)
++.+|+.+.. ..+ ...+.+||+|++|||+.+. +...+......+.+++..+.+
T Consensus 261 ~~~~d~~~~~-~~~-------------~~~~~~fD~Ii~dpP~~~~-------------~~~~~~~~~~~~~~~l~~~~~ 313 (382)
T 1wxx_A 261 VLEANAFDLL-RRL-------------EKEGERFDLVVLDPPAFAK-------------GKKDVERAYRAYKEVNLRAIK 313 (382)
T ss_dssp EEESCHHHHH-HHH-------------HHTTCCEEEEEECCCCSCC-------------STTSHHHHHHHHHHHHHHHHH
T ss_pred EEECCHHHHH-HHH-------------HhcCCCeeEEEECCCCCCC-------------ChhHHHHHHHHHHHHHHHHHH
Confidence 9999988753 000 0014689999999997643 233456677788899999999
Q ss_pred cCCCCCEEEEEcCCCCcccc--HHHHHHH-HhhCCCcEEe
Q psy15212 264 MLKPGGKLLFVTCSLWFEES--EEQAIIF-SKNHKDSIRL 300 (329)
Q Consensus 264 ~LkpgG~lvysTCS~~~~En--e~vv~~~-l~~~~~~~~~ 300 (329)
+|+|||+|++++|+.+..++ ++.+... .+.+..++.+
T Consensus 314 ~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 353 (382)
T 1wxx_A 314 LLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVV 353 (382)
T ss_dssp TEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 99999999999999887765 4556544 4444456554
No 13
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.76 E-value=6.7e-19 Score=161.20 Aligned_cols=234 Identities=14% Similarity=0.073 Sum_probs=152.5
Q ss_pred HHHHHHHHhCCCCCeeEEEcCCCCCHHHHHHHHHH------CCCeeEEeCCceEEEcCCCCCCCCccc-ccceEEEechh
Q psy15212 48 QWKNILDVGHKKPPLTLRINQRKTTLISYNKLLKK------SGLETTIIGPLAIKLHTPISISKIPKF-FNGFCSIQDAA 120 (329)
Q Consensus 48 ~~~~~l~~~~~~~p~~~RvN~~k~~~~~~~~~l~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~Qd~~ 120 (329)
+++.+++.....++.++++|..+.-.++..+.+.+ .+.+..-+. + ...+.....+ ..|.++.+..+
T Consensus 23 ~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~--g-----~~~f~~~~~~~~~~~~ipr~~t 95 (276)
T 2b3t_A 23 DAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLT--G-----VREFWSLPLFVSPATLIPRPDT 95 (276)
T ss_dssp HHHHHHHHHHTCCHHHHHHTTTCBCCHHHHHHHHHHHHHHHTTCCHHHHS--C-----EEEETTEEEECCTTSCCCCTTH
T ss_pred HHHHHHHHHhCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHcCCChhHee--e-----eeEECCceEEeCCCCcccCchH
Confidence 45667777777777888888765433332222221 222110000 0 0000111111 22334445555
Q ss_pred HHHHhhhcCC--CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhh
Q psy15212 121 AQLAAPLLDI--RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKK 196 (329)
Q Consensus 121 s~l~~~~l~~--~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~ 196 (329)
..++..+++. .++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+++|++++|+. ++++.+|+....
T Consensus 96 e~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~--- 172 (276)
T 2b3t_A 96 ECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL--- 172 (276)
T ss_dssp HHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---
T ss_pred HHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc---
Confidence 5665555432 5678999999999999999998766 79999999999999999999999986 899999987642
Q ss_pred hhhhhcccccccccccCCCCCCEEEEccCCcccc-------ccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCC
Q psy15212 197 LYIDINKKTNNRFRFYKNKYFDRILADLPCTGSG-------VVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG 269 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G-------~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG 269 (329)
..+.||.|++||||.+.+ ++.+.|...+.- .......+.++++.+.++|+|||
T Consensus 173 ----------------~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~----~~~g~~~~~~~l~~~~~~LkpgG 232 (276)
T 2b3t_A 173 ----------------AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVA----ADSGMADIVHIIEQSRNALVSGG 232 (276)
T ss_dssp ----------------TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBC----HHHHTHHHHHHHHHHGGGEEEEE
T ss_pred ----------------ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcC----CCcHHHHHHHHHHHHHHhcCCCC
Confidence 246899999999998774 444455444321 11222445789999999999999
Q ss_pred EEEEEcCCCCccccHHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEE
Q psy15212 270 KLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 323 (329)
Q Consensus 270 ~lvysTCS~~~~Ene~vv~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~ 323 (329)
++++.++. .+.+.+..+++++ ++..+ .+.++. .+.+.|++|+
T Consensus 233 ~l~~~~~~----~~~~~~~~~l~~~-Gf~~v----~~~~d~---~g~~r~~~~~ 274 (276)
T 2b3t_A 233 FLLLEHGW----QQGEAVRQAFILA-GYHDV----ETCRDY---GDNERVTLGR 274 (276)
T ss_dssp EEEEECCS----SCHHHHHHHHHHT-TCTTC----CEEECT---TSSEEEEEEE
T ss_pred EEEEEECc----hHHHHHHHHHHHC-CCcEE----EEEecC---CCCCcEEEEE
Confidence 99998553 3445566777765 44322 233444 6778888875
No 14
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.75 E-value=1.5e-17 Score=148.88 Aligned_cols=131 Identities=20% Similarity=0.126 Sum_probs=100.3
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.+++|++|||+|||||+++.++|+.++ ++|+|+|+++.+++.+.+..++. -.+.++.+|++....
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~------------ 139 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQS------------ 139 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGG------------
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccchh------------
Confidence 388999999999999999999999865 79999999999987776665543 248889999987530
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHH-HHHhcCCCCCEEEEE---cC---CCC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILN-NLWKMLKPGGKLLFV---TC---SLW 279 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~-~a~~~LkpgG~lvys---TC---S~~ 279 (329)
.....+.||+|++|.+- | .|.++|. .+.++|||||+|+++ +| +..
T Consensus 140 ---~~~~~~~~D~I~~d~a~---------~----------------~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~ 191 (232)
T 3id6_C 140 ---YKSVVENVDVLYVDIAQ---------P----------------DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKD 191 (232)
T ss_dssp ---TTTTCCCEEEEEECCCC---------T----------------THHHHHHHHHHHHEEEEEEEEEEEC-------CC
T ss_pred ---hhccccceEEEEecCCC---------h----------------hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCC
Confidence 00123689999999762 1 1445554 455599999999987 89 999
Q ss_pred ccccHHHHHHHHhhCCCcEEec
Q psy15212 280 FEESEEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 280 ~~Ene~vv~~~l~~~~~~~~~~ 301 (329)
++||.+.+.++|+.+ +|+++.
T Consensus 192 ~~e~~~~~~~~L~~~-gf~~~~ 212 (232)
T 3id6_C 192 PKEIYKTEVEKLENS-NFETIQ 212 (232)
T ss_dssp SSSSTTHHHHHHHHT-TEEEEE
T ss_pred HHHHHHHHHHHHHHC-CCEEEE
Confidence 999999999999988 587665
No 15
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.75 E-value=2.3e-18 Score=165.93 Aligned_cols=168 Identities=20% Similarity=0.182 Sum_probs=126.2
Q ss_pred CCCCcccccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC--
Q psy15212 103 ISKIPKFFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL-- 180 (329)
Q Consensus 103 ~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~-- 180 (329)
+.....+++|.|..|....+++..+ .+|++|||+|||+|++++++|.....+|+|+|+++.+++.+++|++.+|+
T Consensus 194 v~~~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~ 270 (396)
T 3c0k_A 194 VDIQHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDL 270 (396)
T ss_dssp ECTTTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred EeccccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 3444567789998888887777766 47889999999999999999986436999999999999999999999998
Q ss_pred -ceEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHH
Q psy15212 181 -KATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILN 259 (329)
Q Consensus 181 -~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~ 259 (329)
.++++.+|+.... ..+ . ..+.+||+|++|||+.+.+. .. +......+.+++.
T Consensus 271 ~~v~~~~~D~~~~~-~~~------------~-~~~~~fD~Ii~dpP~~~~~~-----~~--------~~~~~~~~~~~l~ 323 (396)
T 3c0k_A 271 SKAEFVRDDVFKLL-RTY------------R-DRGEKFDVIVMDPPKFVENK-----SQ--------LMGACRGYKDINM 323 (396)
T ss_dssp GGEEEEESCHHHHH-HHH------------H-HTTCCEEEEEECCSSTTTCS-----SS--------SSCCCTHHHHHHH
T ss_pred cceEEEECCHHHHH-HHH------------H-hcCCCCCEEEECCCCCCCCh-----hH--------HHHHHHHHHHHHH
Confidence 4899999987753 000 0 01358999999999864321 00 0111123567899
Q ss_pred HHHhcCCCCCEEEEEcCCCCcc--ccHHHHHHHH-hhCCCcEEe
Q psy15212 260 NLWKMLKPGGKLLFVTCSLWFE--ESEEQAIIFS-KNHKDSIRL 300 (329)
Q Consensus 260 ~a~~~LkpgG~lvysTCS~~~~--Ene~vv~~~l-~~~~~~~~~ 300 (329)
.+.++|+|||++++++|+.+.. ++++++...+ +.+..++.+
T Consensus 324 ~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 367 (396)
T 3c0k_A 324 LAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFI 367 (396)
T ss_dssp HHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999997765 5677777444 444455544
No 16
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.74 E-value=1e-17 Score=148.20 Aligned_cols=171 Identities=15% Similarity=0.155 Sum_probs=125.9
Q ss_pred EEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCcc
Q psy15212 115 SIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDIS 190 (329)
Q Consensus 115 ~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~ 190 (329)
.+++..+.+...++...++.+|||+|||+|..+.++|+.++ ++|+++|+++.+++.+++|+++.|+. ++++.+|+.
T Consensus 41 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (221)
T 3u81_A 41 NVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQ 120 (221)
T ss_dssp GCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred ccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHH
Confidence 34566777777777777788999999999999999998753 79999999999999999999999985 899999987
Q ss_pred ccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCE
Q psy15212 191 KINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGK 270 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~ 270 (329)
+.. +.+ . .....+.||.|++|+++... ....+++..+ ++|||||+
T Consensus 121 ~~l-~~~--------~---~~~~~~~fD~V~~d~~~~~~----------------------~~~~~~~~~~-~~LkpgG~ 165 (221)
T 3u81_A 121 DLI-PQL--------K---KKYDVDTLDMVFLDHWKDRY----------------------LPDTLLLEKC-GLLRKGTV 165 (221)
T ss_dssp HHG-GGT--------T---TTSCCCCCSEEEECSCGGGH----------------------HHHHHHHHHT-TCCCTTCE
T ss_pred HHH-HHH--------H---HhcCCCceEEEEEcCCcccc----------------------hHHHHHHHhc-cccCCCeE
Confidence 642 000 0 00012689999999864411 1123456666 99999999
Q ss_pred EEEEcCCCCccccHHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEEEec
Q psy15212 271 LLFVTCSLWFEESEEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 327 (329)
Q Consensus 271 lvysTCS~~~~Ene~vv~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l~k~ 327 (329)
|++.+|.... ......++..++.++....+ ..+|.. ...|||++++++..
T Consensus 166 lv~~~~~~~~---~~~~~~~l~~~~~~~~~~~~-~~~~~~---~~~dG~~~~~~~g~ 215 (221)
T 3u81_A 166 LLADNVIVPG---TPDFLAYVRGSSSFECTHYS-SYLEYM---KVVDGLEKAIYQGP 215 (221)
T ss_dssp EEESCCCCCC---CHHHHHHHHHCTTEEEEEEE-EEETTT---TEEEEEEEEEECCC
T ss_pred EEEeCCCCcc---hHHHHHHHhhCCCceEEEcc-cccccC---CCCCceEEEEEeCC
Confidence 9999888532 23445666778887655432 344555 67899999998753
No 17
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.74 E-value=8.2e-18 Score=172.91 Aligned_cols=165 Identities=19% Similarity=0.204 Sum_probs=126.1
Q ss_pred EeCCceEEEcCCCCCCCCcccccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHH
Q psy15212 89 IIGPLAIKLHTPISISKIPKFFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRL 168 (329)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl 168 (329)
++.++++.+. +.....++.|.+..|....+++.... +|.+|||+|||+|+++++++.....+|+++|+|+.++
T Consensus 503 ~v~E~g~~~~----v~~~~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al 575 (703)
T 3v97_A 503 EVTEYNAHLW----VNLTDYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 575 (703)
T ss_dssp EEEETTEEEE----ECSSSSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred EEEECCEEEE----EeccccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHH
Confidence 3455666654 22345678899999999988887754 6889999999999999999974336899999999999
Q ss_pred HHHHHHHHHcCCc---eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChh
Q psy15212 169 NMISENLKRLNLK---ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKN 245 (329)
Q Consensus 169 ~~l~~n~~~~g~~---v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~ 245 (329)
+.+++|++.+|+. ++++++|+.+.. . ...++||+|++||||.+.+.- ..
T Consensus 576 ~~a~~N~~~ngl~~~~v~~i~~D~~~~l----------------~-~~~~~fD~Ii~DPP~f~~~~~-----------~~ 627 (703)
T 3v97_A 576 EWAERNLRLNGLTGRAHRLIQADCLAWL----------------R-EANEQFDLIFIDPPTFSNSKR-----------ME 627 (703)
T ss_dssp HHHHHHHHHTTCCSTTEEEEESCHHHHH----------------H-HCCCCEEEEEECCCSBC-----------------
T ss_pred HHHHHHHHHcCCCccceEEEecCHHHHH----------------H-hcCCCccEEEECCccccCCcc-----------ch
Confidence 9999999999985 899999998743 1 124689999999999754321 01
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHH
Q psy15212 246 DIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAI 288 (329)
Q Consensus 246 ~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~ 288 (329)
+.....+.+.+++..+.++|+|||+|++|+|+-....+++..+
T Consensus 628 ~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~ 670 (703)
T 3v97_A 628 DAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLA 670 (703)
T ss_dssp -CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHH
Confidence 1123345678899999999999999999999966666655443
No 18
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.74 E-value=1e-17 Score=161.24 Aligned_cols=166 Identities=20% Similarity=0.195 Sum_probs=127.2
Q ss_pred cccccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEE
Q psy15212 107 PKFFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATL 184 (329)
Q Consensus 107 ~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~ 184 (329)
..++.|.+..|.....++..++ ++|++|||+|||+|+++.++|.....+|+|+|+++.+++.+++|++.+|+. +++
T Consensus 194 ~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~ 271 (396)
T 2as0_A 194 RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKF 271 (396)
T ss_dssp SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEE
T ss_pred cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceE
Confidence 4566788877888877777654 478999999999999999999862259999999999999999999999984 899
Q ss_pred EecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhc
Q psy15212 185 ILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKM 264 (329)
Q Consensus 185 ~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~ 264 (329)
+.+|+.... ..+ .....+||+|++|||+.+. +...+......+.+++..++++
T Consensus 272 ~~~d~~~~~-~~~-------------~~~~~~fD~Vi~dpP~~~~-------------~~~~~~~~~~~~~~~l~~~~~~ 324 (396)
T 2as0_A 272 IVGSAFEEM-EKL-------------QKKGEKFDIVVLDPPAFVQ-------------HEKDLKAGLRAYFNVNFAGLNL 324 (396)
T ss_dssp EESCHHHHH-HHH-------------HHTTCCEEEEEECCCCSCS-------------SGGGHHHHHHHHHHHHHHHHTT
T ss_pred EECCHHHHH-HHH-------------HhhCCCCCEEEECCCCCCC-------------CHHHHHHHHHHHHHHHHHHHHh
Confidence 999987653 000 0024689999999997632 3345666677788999999999
Q ss_pred CCCCCEEEEEcCCCCccc--cHHHHHHHHhh-CCCcEEec
Q psy15212 265 LKPGGKLLFVTCSLWFEE--SEEQAIIFSKN-HKDSIRLN 301 (329)
Q Consensus 265 LkpgG~lvysTCS~~~~E--ne~vv~~~l~~-~~~~~~~~ 301 (329)
|+|||+|+|++|+.+..+ .++.+...... ...++.+.
T Consensus 325 LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 325 VKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp EEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESS
T ss_pred cCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEe
Confidence 999999999999976654 35555544443 33455544
No 19
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.73 E-value=4e-17 Score=147.30 Aligned_cols=166 Identities=14% Similarity=0.130 Sum_probs=122.5
Q ss_pred EechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccc
Q psy15212 116 IQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISK 191 (329)
Q Consensus 116 ~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~ 191 (329)
++...+.+...++...++.+|||+|||+|..+..+++.++ ++|+++|+++.+++.+++++++.|+. ++++.+|+..
T Consensus 47 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 47 VAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 3455666666666667789999999999999999998864 79999999999999999999999985 8999999876
Q ss_pred cchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEE
Q psy15212 192 INLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKL 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~l 271 (329)
.. + .....+.||+|++|+++.. ...+++.+.++|||||+|
T Consensus 127 ~l-~--------------~~~~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~LkpGG~l 166 (248)
T 3tfw_A 127 SL-E--------------SLGECPAFDLIFIDADKPN-------------------------NPHYLRWALRYSRPGTLI 166 (248)
T ss_dssp HH-H--------------TCCSCCCCSEEEECSCGGG-------------------------HHHHHHHHHHTCCTTCEE
T ss_pred HH-H--------------hcCCCCCeEEEEECCchHH-------------------------HHHHHHHHHHhcCCCeEE
Confidence 42 0 1112348999999987441 234788999999999999
Q ss_pred EEEcCCCC--------ccccHHHHHHH---HhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEEEec
Q psy15212 272 LFVTCSLW--------FEESEEQAIIF---SKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 327 (329)
Q Consensus 272 vysTCS~~--------~~Ene~vv~~~---l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l~k~ 327 (329)
++.++.+. ..++...+..| +..++++.....+ .+ +. ...|||++|++++.
T Consensus 167 v~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~--~~-g~---~~~DG~~i~~~~~~ 227 (248)
T 3tfw_A 167 IGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQ--TV-GT---KGWDGFTLAWVNAA 227 (248)
T ss_dssp EEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEE--EC-ST---TCSEEEEEEEECCC
T ss_pred EEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEee--cC-CC---CCCCeeEEEEEeCC
Confidence 99888755 22223334444 4456776643220 01 22 46799999999875
No 20
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.72 E-value=4.2e-18 Score=163.60 Aligned_cols=161 Identities=15% Similarity=0.070 Sum_probs=119.7
Q ss_pred CCcccccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC---c
Q psy15212 105 KIPKFFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL---K 181 (329)
Q Consensus 105 ~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~---~ 181 (329)
....+++|.|..|.....+...++ .+|.+|||+|||+|++++++|.....+|+++|+|+.+++.+++|++.+|+ .
T Consensus 187 ~~~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~ 264 (385)
T 2b78_A 187 LNDGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMAN 264 (385)
T ss_dssp SSSSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTT
T ss_pred ccccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccc
Confidence 345567788877777777777665 57889999999999999999975335999999999999999999999998 4
Q ss_pred eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHH
Q psy15212 182 ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL 261 (329)
Q Consensus 182 v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a 261 (329)
++++.+|+.+.. +.+ ...+.+||+|++|||+.+.+. .......+.+.+++..+
T Consensus 265 v~~~~~D~~~~l-~~~-------------~~~~~~fD~Ii~DPP~~~~~~-------------~~~~~~~~~~~~ll~~~ 317 (385)
T 2b78_A 265 HQLVVMDVFDYF-KYA-------------RRHHLTYDIIIIDPPSFARNK-------------KEVFSVSKDYHKLIRQG 317 (385)
T ss_dssp EEEEESCHHHHH-HHH-------------HHTTCCEEEEEECCCCC------------------CCCCHHHHHHHHHHHH
T ss_pred eEEEECCHHHHH-HHH-------------HHhCCCccEEEECCCCCCCCh-------------hhHHHHHHHHHHHHHHH
Confidence 789999987642 000 002358999999999864321 01112334467789999
Q ss_pred HhcCCCCCEEEEEcCCCCc--cccHHHHHHHHhhC
Q psy15212 262 WKMLKPGGKLLFVTCSLWF--EESEEQAIIFSKNH 294 (329)
Q Consensus 262 ~~~LkpgG~lvysTCS~~~--~Ene~vv~~~l~~~ 294 (329)
.++|+|||.|++++|+-.. ++..+.+.....+.
T Consensus 318 ~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~ 352 (385)
T 2b78_A 318 LEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQ 352 (385)
T ss_dssp HHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTC
T ss_pred HHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHc
Confidence 9999999999999998664 44555666666554
No 21
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.71 E-value=5.5e-17 Score=143.24 Aligned_cols=166 Identities=14% Similarity=0.145 Sum_probs=119.7
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCcccc
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKI 192 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~ 192 (329)
+....++...++...++.+|||+|||+|..+.++++.++ ++|+++|+++.+++.+++++++.|+. ++++.+|+...
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS 122 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 455666666666667788999999999999999999874 79999999999999999999999984 89999998764
Q ss_pred chhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEE
Q psy15212 193 NLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLL 272 (329)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lv 272 (329)
. +.+ .....+.||.|++|+++.. ...+++.+.++|+|||.++
T Consensus 123 ~-~~~------------~~~~~~~fD~v~~d~~~~~-------------------------~~~~l~~~~~~L~pgG~lv 164 (223)
T 3duw_A 123 L-QQI------------ENEKYEPFDFIFIDADKQN-------------------------NPAYFEWALKLSRPGTVII 164 (223)
T ss_dssp H-HHH------------HHTTCCCCSEEEECSCGGG-------------------------HHHHHHHHHHTCCTTCEEE
T ss_pred H-HHH------------HhcCCCCcCEEEEcCCcHH-------------------------HHHHHHHHHHhcCCCcEEE
Confidence 2 000 0001257999999988541 2357889999999999999
Q ss_pred EEcCCCCc--------cccHHHHHHH---HhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEEEe
Q psy15212 273 FVTCSLWF--------EESEEQAIIF---SKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQK 326 (329)
Q Consensus 273 ysTCS~~~--------~Ene~vv~~~---l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l~k 326 (329)
+.++.+.. .++...+..| +..++.+.....| +. +. .++|||++|+++|
T Consensus 165 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p--~~-~~---~~~dG~~~~~~~~ 223 (223)
T 3duw_A 165 GDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQ--TV-GS---KGYDGFIMAVVKE 223 (223)
T ss_dssp EESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEE--EE-ET---TEEEEEEEEEEC-
T ss_pred EeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEe--cc-CC---CCCCeeEEEEEeC
Confidence 87665441 2222333444 4456666543221 11 12 5789999999876
No 22
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.69 E-value=5.8e-17 Score=152.65 Aligned_cols=158 Identities=17% Similarity=0.112 Sum_probs=115.2
Q ss_pred CcccccceEEEechhHHHHhhhcC-CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc---
Q psy15212 106 IPKFFNGFCSIQDAAAQLAAPLLD-IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--- 181 (329)
Q Consensus 106 ~~~~~~G~~~~Qd~~s~l~~~~l~-~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--- 181 (329)
...++.|.+..|......+...+. ..++.+|||+|||+|+.++.++... .+|+++|+|+.+++.+++|++.+++.
T Consensus 126 ~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~g-a~V~~VD~s~~al~~a~~n~~~~gl~~~~ 204 (332)
T 2igt_A 126 TAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAG-AEVTHVDASKKAIGWAKENQVLAGLEQAP 204 (332)
T ss_dssp CSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTT-CEEEEECSCHHHHHHHHHHHHHHTCTTSC
T ss_pred CccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCccc
Confidence 455667888888888776666664 4567899999999999999999854 49999999999999999999999984
Q ss_pred eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHH
Q psy15212 182 ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL 261 (329)
Q Consensus 182 v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a 261 (329)
++++++|+.++.. .. ....++||+|++||||.+.+.-. + +......+.++++.+
T Consensus 205 v~~i~~D~~~~l~-~~-------------~~~~~~fD~Ii~dPP~~~~~~~~---~---------~~~~~~~~~~ll~~~ 258 (332)
T 2igt_A 205 IRWICEDAMKFIQ-RE-------------ERRGSTYDIILTDPPKFGRGTHG---E---------VWQLFDHLPLMLDIC 258 (332)
T ss_dssp EEEECSCHHHHHH-HH-------------HHHTCCBSEEEECCCSEEECTTC---C---------EEEHHHHHHHHHHHH
T ss_pred eEEEECcHHHHHH-HH-------------HhcCCCceEEEECCccccCCchH---H---------HHHHHHHHHHHHHHH
Confidence 7899999877530 00 00146899999999998654210 0 011233456789999
Q ss_pred HhcCCCCCE-EEEEcCCCCccccHHHHHHHHh
Q psy15212 262 WKMLKPGGK-LLFVTCSLWFEESEEQAIIFSK 292 (329)
Q Consensus 262 ~~~LkpgG~-lvysTCS~~~~Ene~vv~~~l~ 292 (329)
.++|+|||. ++..+|+... +.+....+++
T Consensus 259 ~~~LkpgG~lli~~~~~~~~--~~~~~~~~l~ 288 (332)
T 2igt_A 259 REILSPKALGLVLTAYSIRA--SFYSMHELMR 288 (332)
T ss_dssp HHTBCTTCCEEEEEECCTTS--CHHHHHHHHH
T ss_pred HHhcCcCcEEEEEECCCCCC--CHHHHHHHHH
Confidence 999999998 4555676543 3334444443
No 23
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.69 E-value=4e-17 Score=145.28 Aligned_cols=127 Identities=16% Similarity=0.222 Sum_probs=105.4
Q ss_pred ceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecC
Q psy15212 112 GFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSD 188 (329)
Q Consensus 112 G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D 188 (329)
|...+|...+.++..++.+.++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.+++++++.|+. ++++.+|
T Consensus 34 ~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 113 (233)
T 2gpy_A 34 QVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD 113 (233)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC
T ss_pred CCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC
Confidence 44567788888888888878899999999999999999999875 79999999999999999999999984 8999999
Q ss_pred ccccchhhhhhhhccccccccccc-CCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCC
Q psy15212 189 ISKINLKKLYIDINKKTNNRFRFY-KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKP 267 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkp 267 (329)
+.... ... ..+.||+|++|++++ .+..+++.+.++|+|
T Consensus 114 ~~~~~----------------~~~~~~~~fD~I~~~~~~~-------------------------~~~~~l~~~~~~L~p 152 (233)
T 2gpy_A 114 ALQLG----------------EKLELYPLFDVLFIDAAKG-------------------------QYRRFFDMYSPMVRP 152 (233)
T ss_dssp GGGSH----------------HHHTTSCCEEEEEEEGGGS-------------------------CHHHHHHHHGGGEEE
T ss_pred HHHHH----------------HhcccCCCccEEEECCCHH-------------------------HHHHHHHHHHHHcCC
Confidence 87742 011 136899999999865 135689999999999
Q ss_pred CCEEEEEcCCCC
Q psy15212 268 GGKLLFVTCSLW 279 (329)
Q Consensus 268 gG~lvysTCS~~ 279 (329)
||+++++++.+.
T Consensus 153 gG~lv~~~~~~~ 164 (233)
T 2gpy_A 153 GGLILSDNVLFR 164 (233)
T ss_dssp EEEEEEETTTC-
T ss_pred CeEEEEEcCCcC
Confidence 999999976443
No 24
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.69 E-value=7.9e-18 Score=161.17 Aligned_cols=164 Identities=16% Similarity=0.093 Sum_probs=116.5
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHc---------------CC
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRL---------------NL 180 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~---------------g~ 180 (329)
|.....+...++...+|.+|||+|||+|.+++.+|...+ .+|+++|+++.+++.+++|++++ |+
T Consensus 32 ~~~nr~l~~~~l~~~~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl 111 (378)
T 2dul_A 32 MALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE 111 (378)
T ss_dssp GHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS
T ss_pred hHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC
Confidence 454544433333323688999999999999999999866 68999999999999999999999 88
Q ss_pred c-eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHH
Q psy15212 181 K-ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILN 259 (329)
Q Consensus 181 ~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~ 259 (329)
. ++++++|+..+. .. ..+.||+|++||||+. .++|+
T Consensus 112 ~~i~v~~~Da~~~~----------------~~-~~~~fD~I~lDP~~~~--------------------------~~~l~ 148 (378)
T 2dul_A 112 KTIVINHDDANRLM----------------AE-RHRYFHFIDLDPFGSP--------------------------MEFLD 148 (378)
T ss_dssp SEEEEEESCHHHHH----------------HH-STTCEEEEEECCSSCC--------------------------HHHHH
T ss_pred CceEEEcCcHHHHH----------------Hh-ccCCCCEEEeCCCCCH--------------------------HHHHH
Confidence 7 899999988753 11 1357999999999872 35789
Q ss_pred HHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhCCCcEE-ecC--------------------CCcccCCCCCCCCCCe
Q psy15212 260 NLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIR-LNS--------------------PGQLLPTVNKKQDYDG 318 (329)
Q Consensus 260 ~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~~~~~~-~~~--------------------~~~~~p~~~~~~~~~g 318 (329)
.|++.|++|| ++|.||+-....+.......+.++...-. .+. ...+.|.. ...+|
T Consensus 149 ~a~~~lk~gG-~l~vt~td~~~l~~~~~~~~~~~yg~~p~~~~~~~e~~~ri~l~~~~~~~~~~g~~i~P~~---~~~~~ 224 (378)
T 2dul_A 149 TALRSAKRRG-ILGVTATDGAPLCGAHPRACLRKYLAVPLRGELCHEVGTRILVGVIARYAAKYDLGIDVIL---AYYKD 224 (378)
T ss_dssp HHHHHEEEEE-EEEEEECCHHHHTTSSHHHHHHHHSSBCCCSTTHHHHHHHHHHHHHHHHHHTTTEEEEEEE---EEEET
T ss_pred HHHHhcCCCC-EEEEEeecchhhccccHHHHHHHccCCCcccccccchhHHHHHHHHHHhcCcCCcEEEEEE---EEecC
Confidence 9999999999 77889975543322233334433321100 000 01345544 46679
Q ss_pred EEEEEEEec
Q psy15212 319 FFYSLFQKR 327 (329)
Q Consensus 319 ff~a~l~k~ 327 (329)
||++++.|.
T Consensus 225 ~y~rv~vrv 233 (378)
T 2dul_A 225 HYFRAFVKL 233 (378)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999998874
No 25
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.68 E-value=2.9e-16 Score=138.81 Aligned_cols=169 Identities=18% Similarity=0.153 Sum_probs=119.2
Q ss_pred CCCHHHHHHHHHHCCCeeEEe-------CCceEEEcCCCCCCCCcccccceEEEechhH-HHHhhhcC--CCCCCeEEee
Q psy15212 70 KTTLISYNKLLKKSGLETTII-------GPLAIKLHTPISISKIPKFFNGFCSIQDAAA-QLAAPLLD--IRSGMYVLDA 139 (329)
Q Consensus 70 k~~~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~~s-~l~~~~l~--~~~g~~VLDl 139 (329)
.++.+++.+.|.+.|+...+. .+.....+. ......+.+..+...++++.. .....++. ++++.+|||+
T Consensus 6 ~~~~~~l~~~l~~~g~~~~~~~~~a~~~~~r~~f~~~-~~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~~~vLDi 84 (226)
T 1i1n_A 6 GASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKC-NPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDV 84 (226)
T ss_dssp CSSHHHHHHHHHHTTSCCSHHHHHHHHTSCGGGTCSS-CTTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCTTCEEEEE
T ss_pred CchHHHHHHHHHHcCCcCCHHHHHHHHhCCHHHcCCC-ccCCCCccccCCCceecCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 467889999999998742110 011111111 122233333344455666552 22233443 7889999999
Q ss_pred cCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCC------ceEEEecCccccchhhhhhhhcccccccccc
Q psy15212 140 CSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNL------KATLILSDISKINLKKLYIDINKKTNNRFRF 211 (329)
Q Consensus 140 cag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~------~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
|||+|.++.++++.++ ++|+++|+++.+++.+++++.+.++ .++++.+|+....
T Consensus 85 G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~------------------ 146 (226)
T 1i1n_A 85 GSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY------------------ 146 (226)
T ss_dssp TCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC------------------
T ss_pred cCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc------------------
Confidence 9999999999998864 6999999999999999999998764 3889999987543
Q ss_pred cCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHH
Q psy15212 212 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEE 285 (329)
Q Consensus 212 ~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~ 285 (329)
...+.||+|+++++|.. +++.+.+.|||||+|++++|+...+++..
T Consensus 147 ~~~~~fD~i~~~~~~~~----------------------------~~~~~~~~LkpgG~lv~~~~~~~~~~~~~ 192 (226)
T 1i1n_A 147 AEEAPYDAIHVGAAAPV----------------------------VPQALIDQLKPGGRLILPVGPAGGNQMLE 192 (226)
T ss_dssp GGGCCEEEEEECSBBSS----------------------------CCHHHHHTEEEEEEEEEEESCTTSCEEEE
T ss_pred ccCCCcCEEEECCchHH----------------------------HHHHHHHhcCCCcEEEEEEecCCCceEEE
Confidence 12457999999998741 24567889999999999999987766654
No 26
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.68 E-value=4.5e-18 Score=155.71 Aligned_cols=181 Identities=16% Similarity=0.151 Sum_probs=117.4
Q ss_pred HHHHhCCCCCeeEEEcCCCCCHHHH-HHHHHHCCCee-EEeCCceEEEcCCCCCCCCcccccceEEEechhHHHHhhhcC
Q psy15212 52 ILDVGHKKPPLTLRINQRKTTLISY-NKLLKKSGLET-TIIGPLAIKLHTPISISKIPKFFNGFCSIQDAAAQLAAPLLD 129 (329)
Q Consensus 52 ~l~~~~~~~p~~~RvN~~k~~~~~~-~~~l~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~~s~l~~~~l~ 129 (329)
++.+.++.++++.|+|+.+.+.+.+ .+.|...++.. .......+....+........+..+...+++..+..+...++
T Consensus 28 i~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (275)
T 1yb2_A 28 ILVSEDEYGKFDESTNSILVKGKMHHLGISRVIEPGDELIVSGKSFIVSDFSPMYFGRVIRRNTQIISEIDASYIIMRCG 107 (275)
T ss_dssp EEECSSCCEEEETTTTEEEC-CCEEECC-CCCCCTTCEEEETTEEEEEECCCGGGHHHHC------------------CC
T ss_pred EEEecCCCCceeccccceeccCCccchhheeCCCCCcEEEECCeEEEEeCCCHHHHHhhccccccccChhhHHHHHHHcC
Confidence 3457788889999999666543322 12233333311 112222232323333334455566777788888888888889
Q ss_pred CCCCCeEEeecCCCchHHHHHHHh-CC-CEEEEEeCChhHHHHHHHHHHHc-CCc-eEEEecCccccchhhhhhhhcccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEI-AD-IKLISVDNNLSRLNMISENLKRL-NLK-ATLILSDISKINLKKLYIDINKKT 205 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~-~~-~~v~avD~~~~rl~~l~~n~~~~-g~~-v~~~~~D~~~~~~~~~~~~~~~~~ 205 (329)
+.++.+|||+|||+|..+.++++. .+ ++|+++|+++.+++.+++++++. |.. ++++.+|+....
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~------------ 175 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI------------ 175 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC------------
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC------------
Confidence 999999999999999999999987 33 79999999999999999999998 875 899999987632
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
.++.||+|++|+|.. .++|+.+.+.|||||++++++|+.
T Consensus 176 -------~~~~fD~Vi~~~~~~---------------------------~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 176 -------SDQMYDAVIADIPDP---------------------------WNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp -------CSCCEEEEEECCSCG---------------------------GGSHHHHHHTEEEEEEEEEEESSH
T ss_pred -------cCCCccEEEEcCcCH---------------------------HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 346899999988721 146889999999999999998864
No 27
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.68 E-value=5.4e-17 Score=149.65 Aligned_cols=220 Identities=13% Similarity=0.071 Sum_probs=140.0
Q ss_pred cHHHHHHHHHhCCC-hHHHHHHHHHhCCCCCeeEEEcC--CC-CCHHHHHHHHHH--CCCeeEEeC----CceEEEcCCC
Q psy15212 32 PIWWINQVKITYPN-FFQWKNILDVGHKKPPLTLRINQ--RK-TTLISYNKLLKK--SGLETTIIG----PLAIKLHTPI 101 (329)
Q Consensus 32 P~w~~~~~~~~~~~-~~~~~~~l~~~~~~~p~~~RvN~--~k-~~~~~~~~~l~~--~g~~~~~~~----~~~~~~~~~~ 101 (329)
=.|..++|.+.+.+ ..+++-++......++.+++.|. .. .+.+.+.+.+.+ .+.+..-+. ..+..+.
T Consensus 20 ~~~~~~~l~~~~~~~~~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~p~~yi~g~~~f~~~~~~--- 96 (284)
T 1nv8_A 20 IRDCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFL--- 96 (284)
T ss_dssp HHHHHHHTTTTCSCHHHHHHHHHHHHHTCCGGGGCCSSCCCCHHHHHHHHHHHHHHHTTCCHHHHHTEEEETTEEEE---
T ss_pred HHHHHHHHHhccCChHHHHHHHHHHHcCCCHHHHHhccccccccCHHHHHHHHHHHHCCCCCeEEeeeeEECCeEEE---
Confidence 34667777665422 13566788888888888888876 22 222344444332 332211000 0111111
Q ss_pred CCCCCcccccceEEEechhHHHHhhhcC---CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHH
Q psy15212 102 SISKIPKFFNGFCSIQDAAAQLAAPLLD---IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKR 177 (329)
Q Consensus 102 ~~~~~~~~~~G~~~~Qd~~s~l~~~~l~---~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~ 177 (329)
...|.++.+..+..++..++. ..++.+|||+|||+|..+..++.. + .+|+|+|+|+.+++.+++|+++
T Consensus 97 -------v~~~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~ 168 (284)
T 1nv8_A 97 -------VEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAER 168 (284)
T ss_dssp -------CCTTSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHH
T ss_pred -------eCCCceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH
Confidence 012333444555555544442 346789999999999999999988 5 7999999999999999999999
Q ss_pred cCCc--eEEEecCccccchhhhhhhhcccccccccccCCCCC---CEEEEccCCccccccccCCCCcccCChhHHHHHHH
Q psy15212 178 LNLK--ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYF---DRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSK 252 (329)
Q Consensus 178 ~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---D~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~ 252 (329)
+|+. ++++.+|+.... . ++| |+|++||||.+.+. ...++++|. +.....-..
T Consensus 169 ~~l~~~v~~~~~D~~~~~-------------------~-~~f~~~D~IvsnPPyi~~~~-~l~~~v~~e--p~~al~~~~ 225 (284)
T 1nv8_A 169 HGVSDRFFVRKGEFLEPF-------------------K-EKFASIEMILSNPPYVKSSA-HLPKDVLFE--PPEALFGGE 225 (284)
T ss_dssp TTCTTSEEEEESSTTGGG-------------------G-GGTTTCCEEEECCCCBCGGG-SCTTSCCCS--CHHHHBCTT
T ss_pred cCCCCceEEEECcchhhc-------------------c-cccCCCCEEEEcCCCCCccc-ccChhhccC--cHHHhcCCC
Confidence 9985 899999988643 1 357 99999999998887 555665532 111000000
Q ss_pred HHHHHHHHHH-hcCCCCCEEEEEcCCCCccccHHHHH
Q psy15212 253 YSCKILNNLW-KMLKPGGKLLFVTCSLWFEESEEQAI 288 (329)
Q Consensus 253 ~q~~lL~~a~-~~LkpgG~lvysTCS~~~~Ene~vv~ 288 (329)
....+++.+. +.|+|||.+++. +...+++++.+
T Consensus 226 dgl~~~~~i~~~~l~pgG~l~~e---~~~~q~~~v~~ 259 (284)
T 1nv8_A 226 DGLDFYREFFGRYDTSGKIVLME---IGEDQVEELKK 259 (284)
T ss_dssp TSCHHHHHHHHHCCCTTCEEEEE---CCTTCHHHHTT
T ss_pred cHHHHHHHHHHhcCCCCCEEEEE---ECchHHHHHHH
Confidence 0125788888 999999999964 34445555433
No 28
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.67 E-value=5.8e-17 Score=145.95 Aligned_cols=167 Identities=16% Similarity=0.083 Sum_probs=120.3
Q ss_pred eEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecC
Q psy15212 113 FCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSD 188 (329)
Q Consensus 113 ~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D 188 (329)
.+.++....++...++...++.+|||+|||+|..+..+|+.++ ++|+++|+++.+++.+++++++.|+. ++++.+|
T Consensus 41 ~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 120 (242)
T 3r3h_A 41 NMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGP 120 (242)
T ss_dssp GTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESC
T ss_pred CCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 3456677777777777767788999999999999999999774 79999999999999999999999985 8999999
Q ss_pred ccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCC
Q psy15212 189 ISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG 268 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkpg 268 (329)
+.... ..+. .....+.||+|++|++... ...+++.+.++|+||
T Consensus 121 a~~~l-~~~~-----------~~~~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~LkpG 163 (242)
T 3r3h_A 121 ALDTL-HSLL-----------NEGGEHQFDFIFIDADKTN-------------------------YLNYYELALKLVTPK 163 (242)
T ss_dssp HHHHH-HHHH-----------HHHCSSCEEEEEEESCGGG-------------------------HHHHHHHHHHHEEEE
T ss_pred HHHHH-HHHh-----------hccCCCCEeEEEEcCChHH-------------------------hHHHHHHHHHhcCCC
Confidence 87643 0000 0001368999999987321 234688899999999
Q ss_pred CEEEEEcCCCCc-----ccc---HHHHHHH---HhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEEEec
Q psy15212 269 GKLLFVTCSLWF-----EES---EEQAIIF---SKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 327 (329)
Q Consensus 269 G~lvysTCS~~~-----~En---e~vv~~~---l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l~k~ 327 (329)
|.|++..+.+.. ..+ ...+..| +..++++... ++| .+|||++|+.+|.
T Consensus 164 G~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~lp------~~dG~~~~~k~~~ 222 (242)
T 3r3h_A 164 GLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVS-----LLA------IADGMFLVQPIAE 222 (242)
T ss_dssp EEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEE-----EES------SSSCEEEEEEC--
T ss_pred eEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEE-----EEE------ccCceEEEEEcCC
Confidence 999987665432 222 2233333 4456666543 234 3589999997765
No 29
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.67 E-value=9.9e-16 Score=145.18 Aligned_cols=139 Identities=21% Similarity=0.170 Sum_probs=111.5
Q ss_pred HHHhhhcCCCCCCeEEeecCCCchHHHHHHHhC-C-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhh
Q psy15212 122 QLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIA-D-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLY 198 (329)
Q Consensus 122 ~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~-~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~ 198 (329)
.....++..+++..|||+|||+|..+..++... + .+|+|+|+++.+++.+++|+++.|+. +++.++|+.++.
T Consensus 193 ~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~----- 267 (354)
T 3tma_A 193 QALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP----- 267 (354)
T ss_dssp HHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG-----
T ss_pred HHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc-----
Confidence 334455677889999999999999999999876 3 79999999999999999999999996 899999999865
Q ss_pred hhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 199 IDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
.....||.|++||||.- + ......+...+.++++.+.+.|+|||++++.||
T Consensus 268 -------------~~~~~~D~Ii~npPyg~------------r--~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~-- 318 (354)
T 3tma_A 268 -------------RFFPEVDRILANPPHGL------------R--LGRKEGLFHLYWDFLRGALALLPPGGRVALLTL-- 318 (354)
T ss_dssp -------------GTCCCCSEEEECCCSCC------------------CHHHHHHHHHHHHHHHHTSCTTCEEEEEES--
T ss_pred -------------cccCCCCEEEECCCCcC------------c--cCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC--
Confidence 12356999999999851 1 111245566788999999999999999999988
Q ss_pred CccccHHHHHHHHhhCCCcEEe
Q psy15212 279 WFEESEEQAIIFSKNHKDSIRL 300 (329)
Q Consensus 279 ~~~Ene~vv~~~l~~~~~~~~~ 300 (329)
|++.+..+++ .+++..
T Consensus 319 ----~~~~~~~~~~--~g~~~~ 334 (354)
T 3tma_A 319 ----RPALLKRALP--PGFALR 334 (354)
T ss_dssp ----CHHHHHHHCC--TTEEEE
T ss_pred ----CHHHHHHHhh--cCcEEE
Confidence 4566777776 466543
No 30
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.65 E-value=3.9e-16 Score=143.27 Aligned_cols=120 Identities=14% Similarity=0.156 Sum_probs=100.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
+++|++|||+|||+|+.+..+|+....+|+|+|+|+.+++.+++|++.+|+. ++++++|+.++.
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~-------------- 188 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-------------- 188 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--------------
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc--------------
Confidence 4678999999999999999999876557999999999999999999999986 889999998875
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC---CccccH
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL---WFEESE 284 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~---~~~Ene 284 (329)
..+.||+|++|||++. .+++..+.++|+|||++++++|+- ..++..
T Consensus 189 -----~~~~fD~Vi~~~p~~~--------------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 237 (278)
T 2frn_A 189 -----GENIADRILMGYVVRT--------------------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPF 237 (278)
T ss_dssp -----CCSCEEEEEECCCSSG--------------------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTH
T ss_pred -----ccCCccEEEECCchhH--------------------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHH
Confidence 2578999999999652 246888999999999999999983 234555
Q ss_pred HHHHHHHhhC
Q psy15212 285 EQAIIFSKNH 294 (329)
Q Consensus 285 ~vv~~~l~~~ 294 (329)
+.+...+++.
T Consensus 238 ~~i~~~~~~~ 247 (278)
T 2frn_A 238 ETFKRITKEY 247 (278)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 5666666665
No 31
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.65 E-value=1.1e-15 Score=135.42 Aligned_cols=146 Identities=17% Similarity=0.136 Sum_probs=101.4
Q ss_pred CCCCCeEEeecCC-CchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSA-PGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag-~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
+++|.+|||+||| +|..+..+++..+.+|+|+|+++.+++.+++|++.+++.++++.+|+..+.
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~--------------- 117 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIK--------------- 117 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSST---------------
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhh---------------
Confidence 5688999999999 999999999875569999999999999999999999988899999976543
Q ss_pred ccccCCCCCCEEEEccCCccccccccC-CCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHH
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRN-PDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQA 287 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~-p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv 287 (329)
. +.++.||+|++|||+...+.-... |...|....... ....++++.+.++|||||++++.+.+- .+..+.+
T Consensus 118 -~-~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~ 189 (230)
T 3evz_A 118 -G-VVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGE----EFSVKLLEEAFDHLNPGGKVALYLPDK--EKLLNVI 189 (230)
T ss_dssp -T-TCCSCEEEEEECCCCC---------------CCSSSC----HHHHHHHHHHGGGEEEEEEEEEEEESC--HHHHHHH
T ss_pred -h-cccCceeEEEECCCCcCCccccccChhhhhccCccch----HHHHHHHHHHHHHhCCCeEEEEEeccc--HhHHHHH
Confidence 1 234789999999999765442211 111111110111 123678999999999999999875432 2344455
Q ss_pred HHHHhhCCCcEE
Q psy15212 288 IIFSKNHKDSIR 299 (329)
Q Consensus 288 ~~~l~~~~~~~~ 299 (329)
...++++ ++..
T Consensus 190 ~~~l~~~-g~~~ 200 (230)
T 3evz_A 190 KERGIKL-GYSV 200 (230)
T ss_dssp HHHHHHT-TCEE
T ss_pred HHHHHHc-CCce
Confidence 5566665 4443
No 32
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.64 E-value=7.5e-15 Score=128.53 Aligned_cols=132 Identities=16% Similarity=0.214 Sum_probs=104.8
Q ss_pred hhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhh
Q psy15212 119 AAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKK 196 (329)
Q Consensus 119 ~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~ 196 (329)
....++...+.+.++++|||+|||+|..+..+++. +.+|+|+|+++.+++.+++|++++|+. ++++.+|+....
T Consensus 42 ~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--- 117 (204)
T 3njr_A 42 PMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL--- 117 (204)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG---
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc---
Confidence 33445556677889999999999999999999987 679999999999999999999999986 899999988732
Q ss_pred hhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 197 LYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.....||.|++++.. .+. +++.+.+.|||||+++++++
T Consensus 118 ---------------~~~~~~D~v~~~~~~--------------------------~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 118 ---------------ADLPLPEAVFIGGGG--------------------------SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp ---------------TTSCCCSEEEECSCC--------------------------CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred ---------------ccCCCCCEEEECCcc--------------------------cHH-HHHHHHHhcCCCcEEEEEec
Confidence 122579999987621 023 78999999999999999988
Q ss_pred CCCccccHHHHHHHHhhCCCcEEe
Q psy15212 277 SLWFEESEEQAIIFSKNHKDSIRL 300 (329)
Q Consensus 277 S~~~~Ene~vv~~~l~~~~~~~~~ 300 (329)
+ .++...+..+++++. ++..
T Consensus 156 ~---~~~~~~~~~~l~~~g-~~i~ 175 (204)
T 3njr_A 156 T---LESETLLTQLHARHG-GQLL 175 (204)
T ss_dssp S---HHHHHHHHHHHHHHC-SEEE
T ss_pred C---cccHHHHHHHHHhCC-CcEE
Confidence 6 356666666676653 4433
No 33
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.63 E-value=1.4e-15 Score=130.18 Aligned_cols=133 Identities=17% Similarity=0.240 Sum_probs=94.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
+.+|++|||+|||+|..+..+++. +++|+|+|+|+.+++.++++++..|+. ++++..|...+.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~--------------- 83 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD--------------- 83 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG---------------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH---------------
Confidence 568999999999999999999987 679999999999999999999999986 888887776643
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCcc---ccHH
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE---ESEE 285 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~---Ene~ 285 (329)
.+ .++.||.|++++++-..+ ...+......+..+|+.+.+.|||||+++.+.++-++. |.+.
T Consensus 84 -~~-~~~~fD~v~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~ 148 (185)
T 3mti_A 84 -HY-VREPIRAAIFNLGYLPSA-------------DKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDA 148 (185)
T ss_dssp -GT-CCSCEEEEEEEEC------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHH
T ss_pred -hh-ccCCcCEEEEeCCCCCCc-------------chhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHH
Confidence 12 357899999987543110 11122223445678999999999999999988775543 3444
Q ss_pred HHHHHHhhC
Q psy15212 286 QAIIFSKNH 294 (329)
Q Consensus 286 vv~~~l~~~ 294 (329)
+..+++..
T Consensus 149 -~~~~~~~l 156 (185)
T 3mti_A 149 -VLEYVIGL 156 (185)
T ss_dssp -HHHHHHHS
T ss_pred -HHHHHHhC
Confidence 44445443
No 34
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.63 E-value=6.3e-15 Score=128.27 Aligned_cols=137 Identities=15% Similarity=0.211 Sum_probs=108.9
Q ss_pred cceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecC
Q psy15212 111 NGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSD 188 (329)
Q Consensus 111 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D 188 (329)
+|.+ .++.....+...+.+.++++|||+|||+|..+..+++..+ .+|+++|+++.+++.+++|+++.|+. ++++.+|
T Consensus 20 ~g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 98 (204)
T 3e05_A 20 KKLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF 98 (204)
T ss_dssp TTTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC
T ss_pred CCcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 3666 4444445555667888999999999999999999999875 79999999999999999999999986 8999999
Q ss_pred ccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCC
Q psy15212 189 ISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG 268 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkpg 268 (329)
+.... .....||.|+++.+.. ...++++.+.++|+||
T Consensus 99 ~~~~~------------------~~~~~~D~i~~~~~~~-------------------------~~~~~l~~~~~~Lkpg 135 (204)
T 3e05_A 99 APEGL------------------DDLPDPDRVFIGGSGG-------------------------MLEEIIDAVDRRLKSE 135 (204)
T ss_dssp TTTTC------------------TTSCCCSEEEESCCTT-------------------------CHHHHHHHHHHHCCTT
T ss_pred hhhhh------------------hcCCCCCEEEECCCCc-------------------------CHHHHHHHHHHhcCCC
Confidence 86543 1225799999987632 1246899999999999
Q ss_pred CEEEEEcCCCCccccHHHHHHHHhhC
Q psy15212 269 GKLLFVTCSLWFEESEEQAIIFSKNH 294 (329)
Q Consensus 269 G~lvysTCS~~~~Ene~vv~~~l~~~ 294 (329)
|++++++++. ++.+.+...++++
T Consensus 136 G~l~~~~~~~---~~~~~~~~~l~~~ 158 (204)
T 3e05_A 136 GVIVLNAVTL---DTLTKAVEFLEDH 158 (204)
T ss_dssp CEEEEEECBH---HHHHHHHHHHHHT
T ss_pred eEEEEEeccc---ccHHHHHHHHHHC
Confidence 9999987653 4556666677766
No 35
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.63 E-value=1e-15 Score=137.12 Aligned_cols=162 Identities=15% Similarity=0.070 Sum_probs=116.7
Q ss_pred EechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccc
Q psy15212 116 IQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISK 191 (329)
Q Consensus 116 ~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~ 191 (329)
++....++...++...++.+|||+|||+|..+..+++.++ ++|+++|+++.+++.+++++++.|+. ++++.+|+.+
T Consensus 54 ~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 54 TSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 3455566666666556678999999999999999999865 79999999999999999999999985 8999999876
Q ss_pred cchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEE
Q psy15212 192 INLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKL 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~l 271 (329)
.. +.+. . .....+.||.|++|+++. .+..+++.+.++|+|||.+
T Consensus 134 ~l-~~l~--~--------~~~~~~~fD~I~~d~~~~-------------------------~~~~~l~~~~~~L~pGG~l 177 (237)
T 3c3y_A 134 AL-DNLL--Q--------GQESEGSYDFGFVDADKP-------------------------NYIKYHERLMKLVKVGGIV 177 (237)
T ss_dssp HH-HHHH--H--------STTCTTCEEEEEECSCGG-------------------------GHHHHHHHHHHHEEEEEEE
T ss_pred HH-HHHH--h--------ccCCCCCcCEEEECCchH-------------------------HHHHHHHHHHHhcCCCeEE
Confidence 42 0000 0 000146899999998754 1346788899999999999
Q ss_pred EEEcCCCC-----ccc-c-------HHHH---HHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEE
Q psy15212 272 LFVTCSLW-----FEE-S-------EEQA---IIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLF 324 (329)
Q Consensus 272 vysTCS~~-----~~E-n-------e~vv---~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l 324 (329)
++.+|.+. +++ + ...+ .+.+..++++.... +| ..||+++++-
T Consensus 178 v~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~~~~~~~~~-----lp------~~dG~~~~~~ 235 (237)
T 3c3y_A 178 AYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAADPRIEIVH-----LP------LGDGITFCRR 235 (237)
T ss_dssp EEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHHCTTEEEEE-----EC------STTCEEEEEE
T ss_pred EEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHhcCCCeEEEE-----EE------eCCceEEEEE
Confidence 99987544 211 2 1222 33345677766543 34 3589999864
No 36
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.62 E-value=1.2e-15 Score=140.07 Aligned_cols=120 Identities=16% Similarity=0.186 Sum_probs=98.0
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
+++|++|||+|||+|++++.+|.....+|+|+|+|+..++.+++|++.+|+. ++++++|++++.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-------------- 188 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-------------- 188 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--------------
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc--------------
Confidence 5789999999999999999999876579999999999999999999999996 899999998875
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE-cC--CCCccccH
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV-TC--SLWFEESE 284 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys-TC--S~~~~Ene 284 (329)
....||.|++|+|+++. ++|..|.++||+||.|.|. .+ .....+..
T Consensus 189 -----~~~~~D~Vi~~~p~~~~--------------------------~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~ 237 (278)
T 3k6r_A 189 -----GENIADRILMGYVVRTH--------------------------EFIPKALSIAKDGAIIHYHNTVPEKLMPREPF 237 (278)
T ss_dssp -----CCSCEEEEEECCCSSGG--------------------------GGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTH
T ss_pred -----cccCCCEEEECCCCcHH--------------------------HHHHHHHHHcCCCCEEEEEeeecccccchhHH
Confidence 34789999999997732 3577888999999988653 22 22334445
Q ss_pred HHHHHHHhhC
Q psy15212 285 EQAIIFSKNH 294 (329)
Q Consensus 285 ~vv~~~l~~~ 294 (329)
+.++.+.+..
T Consensus 238 e~i~~~~~~~ 247 (278)
T 3k6r_A 238 ETFKRITKEY 247 (278)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 6677776655
No 37
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.61 E-value=4.1e-15 Score=135.12 Aligned_cols=156 Identities=13% Similarity=0.154 Sum_probs=104.2
Q ss_pred hhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHH---cCCc--eEEEecCcccc
Q psy15212 119 AAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKR---LNLK--ATLILSDISKI 192 (329)
Q Consensus 119 ~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~---~g~~--v~~~~~D~~~~ 192 (329)
..+.+.+.++.+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++|++. +++. ++++++|+.+.
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 4567777778888899999999999999999999876 6999999999999999999998 8885 89999999876
Q ss_pred chhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEE
Q psy15212 193 NLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLL 272 (329)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lv 272 (329)
...... ..+..++||+|++|||+...+ -...++...... ..........+++.+.++|||||+++
T Consensus 103 ~~~~~~-----------~~~~~~~fD~Vv~nPPy~~~~-~~~~~~~~~~~a---~~~~~~~~~~~l~~~~~~LkpgG~l~ 167 (260)
T 2ozv_A 103 AKARVE-----------AGLPDEHFHHVIMNPPYNDAG-DRRTPDALKAEA---HAMTEGLFEDWIRTASAIMVSGGQLS 167 (260)
T ss_dssp HHHHHH-----------TTCCTTCEEEEEECCCC-------------------------CCHHHHHHHHHHHEEEEEEEE
T ss_pred hhhhhh-----------hccCCCCcCEEEECCCCcCCC-CCCCcCHHHHHH---hhcCcCCHHHHHHHHHHHcCCCCEEE
Confidence 200000 012356899999999998664 122232211100 00011124578999999999999998
Q ss_pred EEcCCCCccccHHHHHHHHhh
Q psy15212 273 FVTCSLWFEESEEQAIIFSKN 293 (329)
Q Consensus 273 ysTCS~~~~Ene~vv~~~l~~ 293 (329)
+.. +.+....+...+++
T Consensus 168 ~~~----~~~~~~~~~~~l~~ 184 (260)
T 2ozv_A 168 LIS----RPQSVAEIIAACGS 184 (260)
T ss_dssp EEE----CGGGHHHHHHHHTT
T ss_pred EEE----cHHHHHHHHHHHHh
Confidence 753 33333334444444
No 38
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.60 E-value=5e-15 Score=132.05 Aligned_cols=122 Identities=17% Similarity=0.249 Sum_probs=99.5
Q ss_pred EEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccc
Q psy15212 115 SIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISK 191 (329)
Q Consensus 115 ~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~ 191 (329)
.++.....+...++...++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.+++++++.|+. ++++.+|+..
T Consensus 54 ~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 54 IVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred CcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 34566666666677667788999999999999999998654 79999999999999999999999984 8999999987
Q ss_pred cchhhhhhhhccccccccc-ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCE
Q psy15212 192 INLKKLYIDINKKTNNRFR-FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGK 270 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~-~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~ 270 (329)
.. . . ..++||+|++|+++.. +..+++.+.++|||||+
T Consensus 134 ~~----------------~~~-~~~~fD~V~~~~~~~~-------------------------~~~~l~~~~~~LkpgG~ 171 (232)
T 3ntv_A 134 QF----------------ENV-NDKVYDMIFIDAAKAQ-------------------------SKKFFEIYTPLLKHQGL 171 (232)
T ss_dssp CH----------------HHH-TTSCEEEEEEETTSSS-------------------------HHHHHHHHGGGEEEEEE
T ss_pred HH----------------Hhh-ccCCccEEEEcCcHHH-------------------------HHHHHHHHHHhcCCCeE
Confidence 53 1 1 1468999999987541 34589999999999999
Q ss_pred EEEEcCCC
Q psy15212 271 LLFVTCSL 278 (329)
Q Consensus 271 lvysTCS~ 278 (329)
|++..+-+
T Consensus 172 lv~d~~~~ 179 (232)
T 3ntv_A 172 VITDNVLY 179 (232)
T ss_dssp EEEECTTG
T ss_pred EEEeeCCc
Confidence 99865443
No 39
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.60 E-value=3.4e-15 Score=132.53 Aligned_cols=109 Identities=13% Similarity=0.198 Sum_probs=90.0
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc---eEEEecCccccchhhhhhhhcc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK---ATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~---v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
.++++.+|||+|||+|..+..+|+.++ ++|+++|+++.+++.+++++++.|+. ++++.+|+.+..
T Consensus 53 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l---------- 122 (221)
T 3dr5_A 53 NGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM---------- 122 (221)
T ss_dssp CCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG----------
T ss_pred CCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH----------
Confidence 344556999999999999999999764 79999999999999999999999985 899999987753
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
....+++||+|++|++... ..++++.+.++|||||.+++.++.+
T Consensus 123 ------~~~~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 123 ------SRLANDSYQLVFGQVSPMD-------------------------LKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp ------GGSCTTCEEEEEECCCTTT-------------------------HHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred ------HHhcCCCcCeEEEcCcHHH-------------------------HHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 1123578999999976320 2347888999999999999988765
No 40
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.60 E-value=3.3e-16 Score=136.30 Aligned_cols=145 Identities=12% Similarity=0.096 Sum_probs=78.6
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
.++.+|||+|||+|..+..+++..+ .+++++|+++.+++.+++|+...+..++++.+|+.... ...
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~------------ 95 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWL-IER------------ 95 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHH-HHH------------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhh-hhh------------
Confidence 6788999999999999999999875 59999999999999999999988877778888877632 000
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhH----HHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHH
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKND----IKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEE 285 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~----~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~ 285 (329)
....++||+|++|||+...+.+...+.......+.. ...-.....++++.+.++|||||++++.++. ....+
T Consensus 96 -~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~ 171 (215)
T 4dzr_A 96 -AERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG---HNQAD 171 (215)
T ss_dssp -HHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT---TSCHH
T ss_pred -hhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC---CccHH
Confidence 001378999999999987766543222110000000 0001122367899999999999995555444 33445
Q ss_pred HHHHHHh
Q psy15212 286 QAIIFSK 292 (329)
Q Consensus 286 vv~~~l~ 292 (329)
.+..+++
T Consensus 172 ~~~~~l~ 178 (215)
T 4dzr_A 172 EVARLFA 178 (215)
T ss_dssp HHHHHTG
T ss_pred HHHHHHH
Confidence 5666666
No 41
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.60 E-value=4.4e-15 Score=137.58 Aligned_cols=153 Identities=15% Similarity=0.072 Sum_probs=111.2
Q ss_pred CCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHH--cCC---ceEEEecCccccchhhhhhhhcccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKR--LNL---KATLILSDISKINLKKLYIDINKKT 205 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~--~g~---~v~~~~~D~~~~~~~~~~~~~~~~~ 205 (329)
.+.+|||+|||+|+.+..+++..+ .+|+++|+|+.+++.+++++.. .++ .++++.+|+....
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l------------ 157 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYV------------ 157 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHG------------
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHH------------
Confidence 457999999999999999998755 7999999999999999999865 222 3899999987642
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC--CCcccc
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS--LWFEES 283 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS--~~~~En 283 (329)
. ...++||+|++|+|+...|.. ... .+.++++.+.+.|+|||.+++.+|+ +..++.
T Consensus 158 ----~-~~~~~fD~Ii~d~~~~~~~~~----~~l-------------~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~ 215 (296)
T 1inl_A 158 ----R-KFKNEFDVIIIDSTDPTAGQG----GHL-------------FTEEFYQACYDALKEDGVFSAETEDPFYDIGWF 215 (296)
T ss_dssp ----G-GCSSCEEEEEEEC--------------C-------------CSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHH
T ss_pred ----h-hCCCCceEEEEcCCCcccCch----hhh-------------hHHHHHHHHHHhcCCCcEEEEEccCcccCHHHH
Confidence 1 124689999999987522210 000 1356889999999999999999988 556777
Q ss_pred HHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEE
Q psy15212 284 EEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 323 (329)
Q Consensus 284 e~vv~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~ 323 (329)
..+++.+.+.++.+.........+| .+..||++|.
T Consensus 216 ~~~~~~l~~~F~~v~~~~~~vp~~p-----~g~~~f~~as 250 (296)
T 1inl_A 216 KLAYRRISKVFPITRVYLGFMTTYP-----SGMWSYTFAS 250 (296)
T ss_dssp HHHHHHHHHHCSEEEEEEEECTTST-----TSEEEEEEEE
T ss_pred HHHHHHHHHHCCceEEEEeecCccC-----CCceEEEEec
Confidence 8888888877776554432223344 3668898885
No 42
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.59 E-value=4e-15 Score=134.27 Aligned_cols=126 Identities=12% Similarity=0.087 Sum_probs=97.1
Q ss_pred EEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCcc
Q psy15212 115 SIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDIS 190 (329)
Q Consensus 115 ~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~ 190 (329)
.++....++...++...++.+|||+|||+|..+..+++.++ ++|+++|+++.+++.+++++++.|+. ++++.+|+.
T Consensus 62 ~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~ 141 (247)
T 1sui_A 62 TTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPAL 141 (247)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH
Confidence 34556666666666666778999999999999999999864 79999999999999999999999984 899999987
Q ss_pred ccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCE
Q psy15212 191 KINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGK 270 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~ 270 (329)
... +.+. . .....+.||.|++|+++. ....+++.+.++|+|||+
T Consensus 142 ~~l-~~l~--~--------~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~LkpGG~ 185 (247)
T 1sui_A 142 PVL-DEMI--K--------DEKNHGSYDFIFVDADKD-------------------------NYLNYHKRLIDLVKVGGV 185 (247)
T ss_dssp HHH-HHHH--H--------SGGGTTCBSEEEECSCST-------------------------THHHHHHHHHHHBCTTCC
T ss_pred HHH-HHHH--h--------ccCCCCCEEEEEEcCchH-------------------------HHHHHHHHHHHhCCCCeE
Confidence 642 0000 0 000146899999997632 124578889999999999
Q ss_pred EEEEcC
Q psy15212 271 LLFVTC 276 (329)
Q Consensus 271 lvysTC 276 (329)
|++.++
T Consensus 186 lv~d~~ 191 (247)
T 1sui_A 186 IGYDNT 191 (247)
T ss_dssp EEEECT
T ss_pred EEEecC
Confidence 998764
No 43
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.59 E-value=2.1e-14 Score=137.08 Aligned_cols=144 Identities=13% Similarity=0.065 Sum_probs=110.6
Q ss_pred ccccceEEEechhHHHHhhhc-CCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCC-ceEE
Q psy15212 108 KFFNGFCSIQDAAAQLAAPLL-DIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNL-KATL 184 (329)
Q Consensus 108 ~~~~G~~~~Qd~~s~l~~~~l-~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~-~v~~ 184 (329)
.|..++...|+..+.+..... ...+|.+|||+| |+|..+..++.... ++|+++|+++.+++.+++|++++|+ .+++
T Consensus 147 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~ 225 (373)
T 2qm3_A 147 EFDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEI 225 (373)
T ss_dssp GGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEE
T ss_pred hcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEE
Confidence 455667777777766664422 234688999999 99999999998765 7999999999999999999999998 4899
Q ss_pred EecCccc-cchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHh
Q psy15212 185 ILSDISK-INLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWK 263 (329)
Q Consensus 185 ~~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~ 263 (329)
+.+|+.. ++ . ...+.||+|++||||+.. . ...+|+.+.+
T Consensus 226 ~~~D~~~~l~----------------~-~~~~~fD~Vi~~~p~~~~-------------------~----~~~~l~~~~~ 265 (373)
T 2qm3_A 226 FTFDLRKPLP----------------D-YALHKFDTFITDPPETLE-------------------A----IRAFVGRGIA 265 (373)
T ss_dssp ECCCTTSCCC----------------T-TTSSCBSEEEECCCSSHH-------------------H----HHHHHHHHHH
T ss_pred EEChhhhhch----------------h-hccCCccEEEECCCCchH-------------------H----HHHHHHHHHH
Confidence 9999987 43 1 013589999999998721 1 2678999999
Q ss_pred cCCCCC-EEEEEcCCCCccccH---HHHHHHHh-hC
Q psy15212 264 MLKPGG-KLLFVTCSLWFEESE---EQAIIFSK-NH 294 (329)
Q Consensus 264 ~LkpgG-~lvysTCS~~~~Ene---~vv~~~l~-~~ 294 (329)
.||||| .++|++|+ ..++. ..+..++. +.
T Consensus 266 ~LkpgG~~~~~~~~~--~~~~~~~~~~~~~~l~~~~ 299 (373)
T 2qm3_A 266 TLKGPRCAGYFGITR--RESSLDKWREIQKLLLNEF 299 (373)
T ss_dssp TBCSTTCEEEEEECT--TTCCHHHHHHHHHHHHHTS
T ss_pred HcccCCeEEEEEEec--CcCCHHHHHHHHHHHHHhc
Confidence 999999 55888886 23444 55666665 54
No 44
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.58 E-value=1.3e-14 Score=124.76 Aligned_cols=111 Identities=21% Similarity=0.224 Sum_probs=89.9
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhcccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
.+|.+|||+|||+|..+..+++....+|+|+|+|+.+++.+++|++.+++. ++++++|+.++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---------------- 106 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV---------------- 106 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH----------------
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH----------------
Confidence 578899999999999999888754469999999999999999999999985 899999988754
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHh--cCCCCCEEEEEcCCC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWK--MLKPGGKLLFVTCSL 278 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~--~LkpgG~lvysTCS~ 278 (329)
.....+.||+|++|||+... . ....+++..+.+ +|+|||++++.+.+-
T Consensus 107 ~~~~~~~fD~i~~~~p~~~~--------------~-------~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 107 AAGTTSPVDLVLADPPYNVD--------------S-------ADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp HHCCSSCCSEEEECCCTTSC--------------H-------HHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred hhccCCCccEEEECCCCCcc--------------h-------hhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 11235789999999996521 1 123456777777 999999999987653
No 45
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.58 E-value=1e-14 Score=126.60 Aligned_cols=129 Identities=22% Similarity=0.278 Sum_probs=92.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
+++|.+|||+|||||+++..+++. +++|+|+|+++.. ... ++++.+|+..........
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~--------- 81 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDID--------- 81 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHH---------
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHH---------
Confidence 578999999999999999999987 6799999999852 223 789999988753100000
Q ss_pred ccccC---CCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHH
Q psy15212 209 FRFYK---NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEE 285 (329)
Q Consensus 209 ~~~~~---~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~ 285 (329)
..+. .++||+|++|+++..+|.. ..+......++..+|+.+.++|||||+|+.. +...++..
T Consensus 82 -~~~~~~~~~~~D~Vlsd~~~~~~g~~-----------~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k---~~~~~~~~ 146 (191)
T 3dou_A 82 -RALREEGIEKVDDVVSDAMAKVSGIP-----------SRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK---QFQGDMTN 146 (191)
T ss_dssp -HHHHHHTCSSEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE---EECSTHHH
T ss_pred -HHhhcccCCcceEEecCCCcCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHccCCCEEEEE---EcCCCCHH
Confidence 0011 1389999999998766652 1223344566788999999999999999954 44455666
Q ss_pred HHHHHHhhC
Q psy15212 286 QAIIFSKNH 294 (329)
Q Consensus 286 vv~~~l~~~ 294 (329)
.+.+.++.+
T Consensus 147 ~~~~~l~~~ 155 (191)
T 3dou_A 147 DFIAIWRKN 155 (191)
T ss_dssp HHHHHHGGG
T ss_pred HHHHHHHHh
Confidence 667777664
No 46
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.57 E-value=4.1e-15 Score=130.17 Aligned_cols=121 Identities=14% Similarity=0.151 Sum_probs=95.3
Q ss_pred EechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccc
Q psy15212 116 IQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISK 191 (329)
Q Consensus 116 ~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~ 191 (329)
++.....+...++...++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.+++++++.++. ++++.+|+..
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 119 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG 119 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH
Confidence 3444555555555445678999999999999999998764 79999999999999999999999884 8999999876
Q ss_pred cchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEE
Q psy15212 192 INLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKL 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~l 271 (329)
.. +. ..+ ||.|++|+++. .+..+++.+.++|+|||++
T Consensus 120 ~~----------------~~-~~~-fD~v~~~~~~~-------------------------~~~~~l~~~~~~LkpgG~l 156 (210)
T 3c3p_A 120 IA----------------AG-QRD-IDILFMDCDVF-------------------------NGADVLERMNRCLAKNALL 156 (210)
T ss_dssp HH----------------TT-CCS-EEEEEEETTTS-------------------------CHHHHHHHHGGGEEEEEEE
T ss_pred Hh----------------cc-CCC-CCEEEEcCChh-------------------------hhHHHHHHHHHhcCCCeEE
Confidence 42 11 235 99999996533 1346789999999999999
Q ss_pred EEEcCCCC
Q psy15212 272 LFVTCSLW 279 (329)
Q Consensus 272 vysTCS~~ 279 (329)
++.++.+.
T Consensus 157 v~~~~~~~ 164 (210)
T 3c3p_A 157 IAVNALRR 164 (210)
T ss_dssp EEESSSSC
T ss_pred EEECcccc
Confidence 99876543
No 47
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.57 E-value=7.8e-15 Score=128.02 Aligned_cols=109 Identities=19% Similarity=0.179 Sum_probs=86.9
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC--c-eEEEecCccccchhhhhhhhccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL--K-ATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~--~-v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
++.+|||+|||+|..+..++.....+|+|+|+|+.+++.+++|++..|+ . ++++.+|+....
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~--------------- 117 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL--------------- 117 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT---------------
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH---------------
Confidence 6789999999999999987776446999999999999999999999998 4 899999987653
Q ss_pred ccccCCCC-CCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHH--HhcCCCCCEEEEEcCCCC
Q psy15212 209 FRFYKNKY-FDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL--WKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 209 ~~~~~~~~-fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a--~~~LkpgG~lvysTCS~~ 279 (329)
....++. ||+|++|||+. .+. ..++++.+ .++|+|||.+++++|+..
T Consensus 118 -~~~~~~~~fD~I~~~~~~~-~~~----------------------~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 118 -KQPQNQPHFDVVFLDPPFH-FNL----------------------AEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp -TSCCSSCCEEEEEECCCSS-SCH----------------------HHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred -HhhccCCCCCEEEECCCCC-Ccc----------------------HHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 1112467 99999999953 111 12345555 678999999999998765
No 48
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.57 E-value=4.3e-14 Score=126.39 Aligned_cols=151 Identities=13% Similarity=0.050 Sum_probs=106.1
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.+.++.+|||+|||+|..+..++...+ .+|+|+|+|+.+++.++++++++|+. ++++++|+.++..
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~------------ 134 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQ------------ 134 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTT------------
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcc------------
Confidence 345688999999999999999997655 79999999999999999999999986 8999999876540
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHH
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQ 286 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~v 286 (329)
.....+.||.|++++.. ....+++.+.++|+|||++++..+....+|-++.
T Consensus 135 ---~~~~~~~fD~V~~~~~~--------------------------~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~ 185 (240)
T 1xdz_A 135 ---RKDVRESYDIVTARAVA--------------------------RLSVLSELCLPLVKKNGLFVALKAASAEEELNAG 185 (240)
T ss_dssp ---CTTTTTCEEEEEEECCS--------------------------CHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHH
T ss_pred ---cccccCCccEEEEeccC--------------------------CHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHH
Confidence 00014689999986520 0346899999999999999998777655444333
Q ss_pred HHHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEEEec
Q psy15212 287 AIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 327 (329)
Q Consensus 287 v~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l~k~ 327 (329)
...++.+ ++.........+|. .....++..++|.
T Consensus 186 -~~~l~~~-g~~~~~~~~~~~~~-----~~~~~~l~~~~k~ 219 (240)
T 1xdz_A 186 -KKAITTL-GGELENIHSFKLPI-----EESDRNIMVIRKI 219 (240)
T ss_dssp -HHHHHHT-TEEEEEEEEEECTT-----TCCEEEEEEEEEC
T ss_pred -HHHHHHc-CCeEeEEEEEecCC-----CCCceEEEEEEec
Confidence 3445554 45544322122342 2234555556654
No 49
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.57 E-value=1.3e-14 Score=127.89 Aligned_cols=161 Identities=18% Similarity=0.122 Sum_probs=114.0
Q ss_pred EechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccc
Q psy15212 116 IQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISK 191 (329)
Q Consensus 116 ~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~ 191 (329)
++.....+...++...++.+|||+|||+|..+.++++.++ ++|+++|+++.+++.+++++++.|+. ++++.+|+..
T Consensus 48 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (225)
T 3tr6_A 48 TAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKD 127 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHH
Confidence 4455566666666666788999999999999999998764 79999999999999999999999985 8999999865
Q ss_pred cchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEE
Q psy15212 192 INLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKL 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~l 271 (329)
.. +.+. .....+.||.|++|++.. .+..+++.+.++|+|||+|
T Consensus 128 ~~-~~~~-----------~~~~~~~fD~v~~~~~~~-------------------------~~~~~l~~~~~~L~pgG~l 170 (225)
T 3tr6_A 128 TL-AELI-----------HAGQAWQYDLIYIDADKA-------------------------NTDLYYEESLKLLREGGLI 170 (225)
T ss_dssp HH-HHHH-----------TTTCTTCEEEEEECSCGG-------------------------GHHHHHHHHHHHEEEEEEE
T ss_pred HH-HHhh-----------hccCCCCccEEEECCCHH-------------------------HHHHHHHHHHHhcCCCcEE
Confidence 42 0000 000116899999998732 1345788999999999999
Q ss_pred EEEcCCCCcc----c----cHHHHHHHH---hhCCCcEEecCCCcccCCCCCCCCCCeEEEEEE
Q psy15212 272 LFVTCSLWFE----E----SEEQAIIFS---KNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLF 324 (329)
Q Consensus 272 vysTCS~~~~----E----ne~vv~~~l---~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l 324 (329)
++..+.+... + ....+..|. ..++++.... +| ..||+.+++-
T Consensus 171 v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----lp------~~dG~~~~~k 223 (225)
T 3tr6_A 171 AVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMIL-----IP------IGDGLTLARK 223 (225)
T ss_dssp EEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEE-----EC------STTCEEEEEE
T ss_pred EEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEE-----EE------cCCccEEEEE
Confidence 9876654321 1 122344443 3455655433 23 4589988863
No 50
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.56 E-value=3.2e-14 Score=121.47 Aligned_cols=137 Identities=17% Similarity=0.192 Sum_probs=104.9
Q ss_pred hhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc---eEEEecCccccchh
Q psy15212 119 AAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK---ATLILSDISKINLK 195 (329)
Q Consensus 119 ~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~---v~~~~~D~~~~~~~ 195 (329)
..+......+...++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...++. ++++.+|+....
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-- 115 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-- 115 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc--
Confidence 45566666777788999999999999999999987 679999999999999999999998885 889999987643
Q ss_pred hhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 196 KLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
..+.||.|++++|... .. .....+++.+.++|+|||++++++
T Consensus 116 -----------------~~~~~D~v~~~~~~~~--------------~~-------~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 116 -----------------KDRKYNKIITNPPIRA--------------GK-------EVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp -----------------TTSCEEEEEECCCSTT--------------CH-------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------ccCCceEEEECCCccc--------------ch-------hHHHHHHHHHHHHcCCCCEEEEEE
Confidence 3468999999988541 01 123568899999999999999987
Q ss_pred CCCCccccHHHHHHHHhhCCCcE
Q psy15212 276 CSLWFEESEEQAIIFSKNHKDSI 298 (329)
Q Consensus 276 CS~~~~Ene~vv~~~l~~~~~~~ 298 (329)
++. ...++..+.+-+....++
T Consensus 158 ~~~--~~~~~~~~~l~~~~~~~~ 178 (194)
T 1dus_A 158 QTK--QGAKSLAKYMKDVFGNVE 178 (194)
T ss_dssp EST--HHHHHHHHHHHHHHSCCE
T ss_pred CCC--CChHHHHHHHHHHhcceE
Confidence 753 233334444433333333
No 51
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.56 E-value=1.9e-14 Score=124.26 Aligned_cols=136 Identities=22% Similarity=0.273 Sum_probs=100.9
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCC-c-eEEEecCccccchhhhhhhhccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNL-K-ATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~-~-v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
.+++|++|||+|||+|..+..+++..+ ++|+|+|+++.+++.++++++..|+ . ++++.+|+..+.
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------- 87 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD----------- 87 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG-----------
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh-----------
Confidence 467889999999999999999999853 6999999999999999999999998 3 899999988764
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCcc--c
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE--E 282 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~--E 282 (329)
. ..++.||.|++|+|.-..+ +.......+ ...++++.+.++|||||++++++++-++. +
T Consensus 88 -----~-~~~~~fD~v~~~~~~~~~~------~~~~~~~~~-------~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~ 148 (197)
T 3eey_A 88 -----K-YIDCPVKAVMFNLGYLPSG------DHSISTRPE-------TTIQALSKAMELLVTGGIITVVIYYGGDTGFE 148 (197)
T ss_dssp -----G-TCCSCEEEEEEEESBCTTS------CTTCBCCHH-------HHHHHHHHHHHHEEEEEEEEEEECCBTTTBSH
T ss_pred -----h-hccCCceEEEEcCCcccCc------ccccccCcc-------cHHHHHHHHHHhCcCCCEEEEEEccCCCCcHH
Confidence 1 1347899999999862111 000111111 23458999999999999999887654432 2
Q ss_pred cHHHHHHHHhhC
Q psy15212 283 SEEQAIIFSKNH 294 (329)
Q Consensus 283 ne~vv~~~l~~~ 294 (329)
....+..+++..
T Consensus 149 ~~~~~~~~~~~l 160 (197)
T 3eey_A 149 EKEKVLEFLKGV 160 (197)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHHhC
Confidence 334455566544
No 52
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.55 E-value=1.4e-14 Score=129.14 Aligned_cols=102 Identities=19% Similarity=0.275 Sum_probs=82.9
Q ss_pred ceEEEech--hHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC--ceEEEec
Q psy15212 112 GFCSIQDA--AAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL--KATLILS 187 (329)
Q Consensus 112 G~~~~Qd~--~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~--~v~~~~~ 187 (329)
|++..+.. ...++..+....++.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.+++|++..|+ .++++++
T Consensus 56 ~~~~~~~~~~~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 134 (241)
T 3gdh_A 56 GWFSVTPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICG 134 (241)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES
T ss_pred ceeecCHHHHHHHHHHHhhhccCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEEC
Confidence 44433443 45555555555578999999999999999999864 6999999999999999999999998 3899999
Q ss_pred CccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccc
Q psy15212 188 DISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVR 233 (329)
Q Consensus 188 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~ 233 (329)
|+..+. ..+.||+|++||||.+.+...
T Consensus 135 d~~~~~-------------------~~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 135 DFLLLA-------------------SFLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp CHHHHG-------------------GGCCCSEEEECCCCSSGGGGG
T ss_pred ChHHhc-------------------ccCCCCEEEECCCcCCcchhh
Confidence 988764 246899999999999876654
No 53
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.55 E-value=2.9e-15 Score=143.68 Aligned_cols=141 Identities=19% Similarity=0.090 Sum_probs=103.1
Q ss_pred ccceE-EEechhHHHHhhh---cCC--CCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 110 FNGFC-SIQDAAAQLAAPL---LDI--RSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 110 ~~G~~-~~Qd~~s~l~~~~---l~~--~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
..|+| ..|.....+...+ +.. ++|.+|||+|||+|++++.+|...+ .+|+++|+++.+++.+++|++.+|+.
T Consensus 24 ~~~Ffn~~~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~ 103 (392)
T 3axs_A 24 MPVFYNPRMRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP 103 (392)
T ss_dssp CCSSCCGGGHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEcCCcHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC
Confidence 34444 2455555554322 222 5789999999999999999998754 59999999999999999999999984
Q ss_pred ---eEEEecCccccchhhhhhhhccccccccc-ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHH
Q psy15212 182 ---ATLILSDISKINLKKLYIDINKKTNNRFR-FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKI 257 (329)
Q Consensus 182 ---v~~~~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~l 257 (329)
++++.+|+..+. . .. .+.||+|++||+|+. ..+
T Consensus 104 ~~~v~v~~~Da~~~l----------------~~~~-~~~fD~V~lDP~g~~--------------------------~~~ 140 (392)
T 3axs_A 104 EDRYEIHGMEANFFL----------------RKEW-GFGFDYVDLDPFGTP--------------------------VPF 140 (392)
T ss_dssp GGGEEEECSCHHHHH----------------HSCC-SSCEEEEEECCSSCC--------------------------HHH
T ss_pred CceEEEEeCCHHHHH----------------HHhh-CCCCcEEEECCCcCH--------------------------HHH
Confidence 889999987753 1 11 357999999997541 247
Q ss_pred HHHHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhC
Q psy15212 258 LNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 294 (329)
Q Consensus 258 L~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~ 294 (329)
++.|.++|++|| ++|+||+-........+...+.+|
T Consensus 141 l~~a~~~Lk~gG-ll~~t~t~~~~l~g~~~~~~~rkY 176 (392)
T 3axs_A 141 IESVALSMKRGG-ILSLTATDTAPLSGTYPKTCMRRY 176 (392)
T ss_dssp HHHHHHHEEEEE-EEEEEECCHHHHTTSSHHHHHHHH
T ss_pred HHHHHHHhCCCC-EEEEEecchhhhccccHHHHHHHh
Confidence 889999999999 778889765532222233444444
No 54
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.55 E-value=1.7e-14 Score=128.93 Aligned_cols=115 Identities=20% Similarity=0.216 Sum_probs=91.5
Q ss_pred HHHHhhhc------CCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCcccc
Q psy15212 121 AQLAAPLL------DIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKI 192 (329)
Q Consensus 121 s~l~~~~l------~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~ 192 (329)
|.|++.++ .++||++|||+|||+|..+.++|+..+ |+|+|+|+++.+++.+++++++.+ .+..+.+|+..+
T Consensus 60 sklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~-ni~~V~~d~~~p 138 (233)
T 4df3_A 60 SKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR-NIFPILGDARFP 138 (233)
T ss_dssp CHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT-TEEEEESCTTCG
T ss_pred hHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc-CeeEEEEeccCc
Confidence 56666554 489999999999999999999999876 899999999999999999887653 377788888775
Q ss_pred chhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEE
Q psy15212 193 NLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLL 272 (329)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lv 272 (329)
.. .......+|.|++|.+... ....++.++.++|||||+++
T Consensus 139 ~~---------------~~~~~~~vDvVf~d~~~~~------------------------~~~~~l~~~~r~LKpGG~lv 179 (233)
T 4df3_A 139 EK---------------YRHLVEGVDGLYADVAQPE------------------------QAAIVVRNARFFLRDGGYML 179 (233)
T ss_dssp GG---------------GTTTCCCEEEEEECCCCTT------------------------HHHHHHHHHHHHEEEEEEEE
T ss_pred cc---------------cccccceEEEEEEeccCCh------------------------hHHHHHHHHHHhccCCCEEE
Confidence 41 0123468999999987541 12357899999999999999
Q ss_pred EEc
Q psy15212 273 FVT 275 (329)
Q Consensus 273 ysT 275 (329)
.+.
T Consensus 180 I~i 182 (233)
T 4df3_A 180 MAI 182 (233)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 55
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=1.2e-14 Score=132.88 Aligned_cols=107 Identities=19% Similarity=0.242 Sum_probs=89.2
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhccc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
+..+.+|++|||+|||+|..+..+|...+ ++|+|+|+++.+++.+++|++.+|+. +.++.+|+....
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~----------- 182 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE----------- 182 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC-----------
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcC-----------
Confidence 33467899999999999999999999865 69999999999999999999999986 889999988653
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
..+.||.|++|||.. ..+++..+.+.|+|||+++++ |...
T Consensus 183 --------~~~~~D~Vi~d~p~~--------------------------~~~~l~~~~~~LkpgG~l~~s-~~~~ 222 (272)
T 3a27_A 183 --------LKDVADRVIMGYVHK--------------------------THKFLDKTFEFLKDRGVIHYH-ETVA 222 (272)
T ss_dssp --------CTTCEEEEEECCCSS--------------------------GGGGHHHHHHHEEEEEEEEEE-EEEE
T ss_pred --------ccCCceEEEECCccc--------------------------HHHHHHHHHHHcCCCCEEEEE-EcCc
Confidence 146799999999951 123688888999999988755 5544
No 56
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.53 E-value=2e-14 Score=135.69 Aligned_cols=174 Identities=16% Similarity=0.139 Sum_probs=114.0
Q ss_pred ceEEEechhHHHHhhhc----CCCCCCeEEeecCCCchHHHHHHHhCC------CEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 112 GFCSIQDAAAQLAAPLL----DIRSGMYVLDACSAPGGKTCHLLEIAD------IKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 112 G~~~~Qd~~s~l~~~~l----~~~~g~~VLDlcag~G~kt~~la~~~~------~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
|.++-.+.-..+...++ .+.++.+|||+|||+|+.+..+++.++ ..++|+|+++.+++.++.|+...|+.
T Consensus 106 g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~ 185 (344)
T 2f8l_A 106 NHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQK 185 (344)
T ss_dssp GGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred CcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCC
Confidence 44444344444434333 566788999999999999999988753 58999999999999999999988888
Q ss_pred eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCC-CCcccCChhHHHHHHHHHHHHHHH
Q psy15212 182 ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNP-DIPWLRRKNDIKKLSKYSCKILNN 260 (329)
Q Consensus 182 v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p-~~~~~~~~~~~~~l~~~q~~lL~~ 260 (329)
+.++.+|+.... ....||+|++|||++. +.... ...|.... .......+..++.+
T Consensus 186 ~~i~~~D~l~~~-------------------~~~~fD~Ii~NPPfg~---~~~~~~~~~~~~~~--~~g~~~~~~~~l~~ 241 (344)
T 2f8l_A 186 MTLLHQDGLANL-------------------LVDPVDVVISDLPVGY---YPDDENAKTFELCR--EEGHSFAHFLFIEQ 241 (344)
T ss_dssp CEEEESCTTSCC-------------------CCCCEEEEEEECCCSE---ESCHHHHTTSTTCC--SSSCEEHHHHHHHH
T ss_pred ceEEECCCCCcc-------------------ccCCccEEEECCCCCC---cCchhhhhhccccC--CCCcchHHHHHHHH
Confidence 889999987643 2468999999999742 21100 00111000 00011235568999
Q ss_pred HHhcCCCCCEEEEEc-CCCCccccHHHHHHHHhhCCCcE-EecCCCcccCC
Q psy15212 261 LWKMLKPGGKLLFVT-CSLWFEESEEQAIIFSKNHKDSI-RLNSPGQLLPT 309 (329)
Q Consensus 261 a~~~LkpgG~lvysT-CS~~~~Ene~vv~~~l~~~~~~~-~~~~~~~~~p~ 309 (329)
+.+.|+|||++++.+ .++...+....+...+.++.... .+..+..+++.
T Consensus 242 ~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii~lp~~~F~~ 292 (344)
T 2f8l_A 242 GMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKS 292 (344)
T ss_dssp HHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEEECCGGGSCC
T ss_pred HHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEeeeCChhhccC
Confidence 999999999999887 33334444555555554432222 24445555554
No 57
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.52 E-value=3.4e-14 Score=135.51 Aligned_cols=151 Identities=13% Similarity=0.114 Sum_probs=98.2
Q ss_pred CCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhccccccccc-
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNNRFR- 210 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~~- 210 (329)
|++|||+|||+|.+++.+|... .+|+|+|+++.+++.+++|++.+|+. ++++.+|+.+.. +.+. .+.. -.++.
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~-~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~-~~~~--~~~~-~~~l~~ 288 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF-DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT-QAMN--GVRE-FNRLQG 288 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS-SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH-HHHS--SCCC-CTTGGG
T ss_pred CCEEEEccCCCCHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH-HHHh--hccc-cccccc
Confidence 6789999999999999999743 59999999999999999999999986 899999987652 0000 0000 00000
Q ss_pred -ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHHH
Q psy15212 211 -FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAII 289 (329)
Q Consensus 211 -~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~ 289 (329)
......||+|++|||+.|. ...+.+.|+++|+++|.+|+.. .-..-+..
T Consensus 289 ~~~~~~~fD~Vv~dPPr~g~----------------------------~~~~~~~l~~~g~ivyvsc~p~--t~ard~~~ 338 (369)
T 3bt7_A 289 IDLKSYQCETIFVDPPRSGL----------------------------DSETEKMVQAYPRILYISCNPE--TLCKNLET 338 (369)
T ss_dssp SCGGGCCEEEEEECCCTTCC----------------------------CHHHHHHHTTSSEEEEEESCHH--HHHHHHHH
T ss_pred cccccCCCCEEEECcCcccc----------------------------HHHHHHHHhCCCEEEEEECCHH--HHHHHHHH
Confidence 0001379999999998742 2234455679999999999632 22222333
Q ss_pred HHhhCCCcEEecC-CCcccCCCCCCCCCCeEEEEEEEe
Q psy15212 290 FSKNHKDSIRLNS-PGQLLPTVNKKQDYDGFFYSLFQK 326 (329)
Q Consensus 290 ~l~~~~~~~~~~~-~~~~~p~~~~~~~~~gff~a~l~k 326 (329)
+.+. +.+... +...+|++ +..+- +|+|+|
T Consensus 339 l~~~---y~~~~~~~~D~FP~T---~HvE~--v~ll~r 368 (369)
T 3bt7_A 339 LSQT---HKVERLALFDQFPYT---HHMQC--GVLLTA 368 (369)
T ss_dssp HHHH---EEEEEEEEECCSTTS---SCCEE--EEEEEE
T ss_pred HhhC---cEEEEEEeeccCCCC---CcEEE--EEEEEe
Confidence 3332 333222 23457876 33332 666665
No 58
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.52 E-value=1.6e-13 Score=123.34 Aligned_cols=128 Identities=22% Similarity=0.276 Sum_probs=99.9
Q ss_pred chhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccc
Q psy15212 118 DAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIA--DIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKIN 193 (329)
Q Consensus 118 d~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~--~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~ 193 (329)
......+...+++.+|.+|||+|||+|..+.++++.+ +++|+++|+++.+++.++++++..|+. ++++.+|+....
T Consensus 79 ~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 158 (255)
T 3mb5_A 79 PKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI 158 (255)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC
T ss_pred HhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc
Confidence 3344556667788999999999999999999999983 279999999999999999999999985 899999987542
Q ss_pred hhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEE
Q psy15212 194 LKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLF 273 (329)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvy 273 (329)
..+.||.|++|+|+. ..+++++.+.|+|||+++.
T Consensus 159 -------------------~~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~~gG~l~~ 192 (255)
T 3mb5_A 159 -------------------EEENVDHVILDLPQP---------------------------ERVVEHAAKALKPGGFFVA 192 (255)
T ss_dssp -------------------CCCSEEEEEECSSCG---------------------------GGGHHHHHHHEEEEEEEEE
T ss_pred -------------------CCCCcCEEEECCCCH---------------------------HHHHHHHHHHcCCCCEEEE
Confidence 356799999998844 1368889999999999986
Q ss_pred EcCCCCccccHHHHHHHHhhC
Q psy15212 274 VTCSLWFEESEEQAIIFSKNH 294 (329)
Q Consensus 274 sTCS~~~~Ene~vv~~~l~~~ 294 (329)
.+-+ .+....+...++++
T Consensus 193 ~~~~---~~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 193 YTPC---SNQVMRLHEKLREF 210 (255)
T ss_dssp EESS---HHHHHHHHHHHHHT
T ss_pred EECC---HHHHHHHHHHHHHc
Confidence 5422 22333344455554
No 59
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.52 E-value=8.7e-14 Score=117.66 Aligned_cols=135 Identities=19% Similarity=0.182 Sum_probs=100.6
Q ss_pred ceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecC
Q psy15212 112 GFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSD 188 (329)
Q Consensus 112 G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D 188 (329)
|.+..++... .+...+.+.++++|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...|+. + ++.+|
T Consensus 6 g~~t~~~~~~-~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d 83 (178)
T 3hm2_A 6 GQLTKQHVRA-LAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQG 83 (178)
T ss_dssp CCSHHHHHHH-HHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECC
T ss_pred CcccHHHHHH-HHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecc
Confidence 4444344333 334455788899999999999999999998865 79999999999999999999999886 6 77888
Q ss_pred ccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCC
Q psy15212 189 ISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG 268 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkpg 268 (329)
+...- . ...+.||.|+++.+... ..+++.+.++|+||
T Consensus 84 ~~~~~----------------~-~~~~~~D~i~~~~~~~~--------------------------~~~l~~~~~~L~~g 120 (178)
T 3hm2_A 84 APRAF----------------D-DVPDNPDVIFIGGGLTA--------------------------PGVFAAAWKRLPVG 120 (178)
T ss_dssp TTGGG----------------G-GCCSCCSEEEECC-TTC--------------------------TTHHHHHHHTCCTT
T ss_pred hHhhh----------------h-ccCCCCCEEEECCcccH--------------------------HHHHHHHHHhcCCC
Confidence 75421 1 11268999997665320 34789999999999
Q ss_pred CEEEEEcCCCCccccHHHHHHHHhhC
Q psy15212 269 GKLLFVTCSLWFEESEEQAIIFSKNH 294 (329)
Q Consensus 269 G~lvysTCS~~~~Ene~vv~~~l~~~ 294 (329)
|++++++++. ++...+..+++++
T Consensus 121 G~l~~~~~~~---~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 121 GRLVANAVTV---ESEQMLWALRKQF 143 (178)
T ss_dssp CEEEEEECSH---HHHHHHHHHHHHH
T ss_pred CEEEEEeecc---ccHHHHHHHHHHc
Confidence 9999988763 4445555666655
No 60
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.51 E-value=1.8e-13 Score=123.60 Aligned_cols=128 Identities=16% Similarity=0.140 Sum_probs=97.1
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhcccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
..++.+|||+|||+|..++.+|...+ .+|+++|+++.+++.+++|++++|+. ++++++|+.++..
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~------------- 144 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAR------------- 144 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTT-------------
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhc-------------
Confidence 35788999999999999999998866 79999999999999999999999996 9999999887540
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHH
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQA 287 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv 287 (329)
.....++||.|++.+-. + ...+++.+.++|||||++++..+....+|-++ +
T Consensus 145 --~~~~~~~fD~I~s~a~~-------------------~-------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~-~ 195 (249)
T 3g89_A 145 --EAGHREAYARAVARAVA-------------------P-------LCVLSELLLPFLEVGGAAVAMKGPRVEEELAP-L 195 (249)
T ss_dssp --STTTTTCEEEEEEESSC-------------------C-------HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTT-H
T ss_pred --ccccCCCceEEEECCcC-------------------C-------HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHH-H
Confidence 00013689999975310 0 23578999999999999998877755544433 3
Q ss_pred HHHHhhCCCcEEe
Q psy15212 288 IIFSKNHKDSIRL 300 (329)
Q Consensus 288 ~~~l~~~~~~~~~ 300 (329)
...++.. ++...
T Consensus 196 ~~~l~~~-G~~~~ 207 (249)
T 3g89_A 196 PPALERL-GGRLG 207 (249)
T ss_dssp HHHHHHH-TEEEE
T ss_pred HHHHHHc-CCeEE
Confidence 3444444 44433
No 61
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.51 E-value=4.9e-14 Score=125.62 Aligned_cols=157 Identities=15% Similarity=0.144 Sum_probs=112.2
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCcccc
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKI 192 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~ 192 (329)
+.....+...++...++.+|||+|||+|..+..+++.++ ++|+++|+++.+++.+++++++.|+. ++++.+|+...
T Consensus 57 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 136 (232)
T 3cbg_A 57 SPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT 136 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 344445555555555678999999999999999998764 69999999999999999999999984 89999998653
Q ss_pred chhhhhhhhcccccccccccCC--CCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCE
Q psy15212 193 NLKKLYIDINKKTNNRFRFYKN--KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGK 270 (329)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~--~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~ 270 (329)
. +.+ . ..+ +.||.|++|++.. ....+++.+.++|+|||+
T Consensus 137 l-~~l------------~-~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~LkpgG~ 177 (232)
T 3cbg_A 137 L-EQL------------T-QGKPLPEFDLIFIDADKR-------------------------NYPRYYEIGLNLLRRGGL 177 (232)
T ss_dssp H-HHH------------H-TSSSCCCEEEEEECSCGG-------------------------GHHHHHHHHHHTEEEEEE
T ss_pred H-HHH------------H-hcCCCCCcCEEEECCCHH-------------------------HHHHHHHHHHHHcCCCeE
Confidence 2 000 0 112 6899999997632 124578899999999999
Q ss_pred EEEEcCCCCc--------cccHHHHHHHHh---hCCCcEEecCCCcccCCCCCCCCCCeEEEEE
Q psy15212 271 LLFVTCSLWF--------EESEEQAIIFSK---NHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 323 (329)
Q Consensus 271 lvysTCS~~~--------~Ene~vv~~~l~---~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~ 323 (329)
+++.++.+.. .+....+..|.+ .++.+... ++| ..|||.+++
T Consensus 178 lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~lp------~~dG~~~~~ 230 (232)
T 3cbg_A 178 MVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRIS-----VIP------LGDGMTLAL 230 (232)
T ss_dssp EEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEE-----EEC------SBTCEEEEE
T ss_pred EEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEE-----EEE------cCCeEEEEE
Confidence 9998887642 223344555543 34554432 234 348988875
No 62
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.51 E-value=1.1e-13 Score=120.26 Aligned_cols=133 Identities=14% Similarity=0.076 Sum_probs=102.6
Q ss_pred hHHHHhhhcC--CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhh
Q psy15212 120 AAQLAAPLLD--IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKK 196 (329)
Q Consensus 120 ~s~l~~~~l~--~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~ 196 (329)
........+. +.++.+|||+|||+|..+..+++....+|+++|+++.+++.+++++...++. ++++.+|+....
T Consensus 46 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--- 122 (205)
T 3grz_A 46 TTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV--- 122 (205)
T ss_dssp HHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC---
T ss_pred cHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC---
Confidence 3444444444 6688999999999999999988753369999999999999999999999987 899999987643
Q ss_pred hhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 197 LYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.+.||.|+++++.. ....+++.+.++|+|||++++++.
T Consensus 123 -----------------~~~fD~i~~~~~~~-------------------------~~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 123 -----------------DGKFDLIVANILAE-------------------------ILLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp -----------------CSCEEEEEEESCHH-------------------------HHHHHGGGSGGGEEEEEEEEEEEE
T ss_pred -----------------CCCceEEEECCcHH-------------------------HHHHHHHHHHHhcCCCCEEEEEec
Confidence 46899999987621 135689999999999999998754
Q ss_pred CCCccccHHHHHHHHhhCCCcEEec
Q psy15212 277 SLWFEESEEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 277 S~~~~Ene~vv~~~l~~~~~~~~~~ 301 (329)
. .+..+.+...+++. +++.+.
T Consensus 161 ~---~~~~~~~~~~~~~~-Gf~~~~ 181 (205)
T 3grz_A 161 D---YLQLPKIEQALAEN-SFQIDL 181 (205)
T ss_dssp E---GGGHHHHHHHHHHT-TEEEEE
T ss_pred C---cccHHHHHHHHHHc-CCceEE
Confidence 3 23445566666665 566554
No 63
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.51 E-value=1.1e-13 Score=132.42 Aligned_cols=128 Identities=15% Similarity=0.141 Sum_probs=99.3
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc----eEEEecCccc
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK----ATLILSDISK 191 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~----v~~~~~D~~~ 191 (329)
.|..+.+....+...++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++|++.+|+. ++++.+|+..
T Consensus 207 ~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 207 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 286 (375)
T ss_dssp CCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT
T ss_pred ccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc
Confidence 344566677777777789999999999999999999875 79999999999999999999999864 6779999876
Q ss_pred cchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEE
Q psy15212 192 INLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKL 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~l 271 (329)
.. .+++||.|++|||+.....+. . ....++++.+.+.|||||++
T Consensus 287 ~~-------------------~~~~fD~Ii~nppfh~~~~~~-----------~------~~~~~~l~~~~~~LkpgG~l 330 (375)
T 4dcm_A 287 GV-------------------EPFRFNAVLCNPPFHQQHALT-----------D------NVAWEMFHHARRCLKINGEL 330 (375)
T ss_dssp TC-------------------CTTCEEEEEECCCC------------------C------CHHHHHHHHHHHHEEEEEEE
T ss_pred cC-------------------CCCCeeEEEECCCcccCcccC-----------H------HHHHHHHHHHHHhCCCCcEE
Confidence 32 456899999999975311110 0 01236899999999999999
Q ss_pred EEEcCCCCc
Q psy15212 272 LFVTCSLWF 280 (329)
Q Consensus 272 vysTCS~~~ 280 (329)
++++-+..+
T Consensus 331 ~iv~n~~~~ 339 (375)
T 4dcm_A 331 YIVANRHLD 339 (375)
T ss_dssp EEEEETTSC
T ss_pred EEEEECCcC
Confidence 997655444
No 64
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.51 E-value=1.5e-13 Score=120.61 Aligned_cols=116 Identities=16% Similarity=0.304 Sum_probs=90.8
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.++.+|||+|||+|..+..+++..+ ..++|+|+++.+++.+++++.+.|+. ++++.+|+..+.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--------------- 104 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT--------------- 104 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGG---------------
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHH---------------
Confidence 4678999999999999999999876 79999999999999999999999986 899999998754
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
..+..+.||.|++++|.. |......... ..+..+++.+.++|+|||.++++|-
T Consensus 105 -~~~~~~~~D~i~~~~~~~------------~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 105 -DYFEDGEIDRLYLNFSDP------------WPKKRHEKRR--LTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp -GTSCTTCCSEEEEESCCC------------CCSGGGGGGS--TTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred -hhcCCCCCCEEEEECCCC------------ccccchhhhc--cCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 223456899999997732 1110000000 0246789999999999999998753
No 65
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.51 E-value=7.6e-14 Score=122.86 Aligned_cols=116 Identities=13% Similarity=0.249 Sum_probs=90.4
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.++.+|||+|||+|..+..+|+..+ ..|+|+|+|+.+++.+++++++.|+. ++++.+|+..+.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~--------------- 101 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT--------------- 101 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH---------------
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHH---------------
Confidence 4578999999999999999999876 79999999999999999999999986 899999998753
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
..+..+.||.|+++.|.. |.........+ .+..+|+.+.++|||||.|+++|-
T Consensus 102 -~~~~~~~~d~v~~~~~~p------------~~~~~~~~~rl--~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 102 -DVFEPGEVKRVYLNFSDP------------WPKKRHEKRRL--TYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp -HHCCTTSCCEEEEESCCC------------CCSGGGGGGST--TSHHHHHHHHHHHTTSCEEEEEES
T ss_pred -hhcCcCCcCEEEEECCCC------------CcCcccccccc--CcHHHHHHHHHHcCCCCEEEEEeC
Confidence 223456899999876532 11110000000 246789999999999999998863
No 66
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.50 E-value=3e-13 Score=117.58 Aligned_cols=123 Identities=18% Similarity=0.212 Sum_probs=95.2
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.+.++.+|||+|||+|..+..+++....+|+|+|+++.+++.+++|++..++.++++.+|+..++
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--------------- 110 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN--------------- 110 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---------------
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---------------
Confidence 45678999999999999999999863368999999999999999999998888899999987753
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHH
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAI 288 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~ 288 (329)
..||.|++|||+.... +. ....+|+.+.+.+ || +|+.| +.+.++.+.+.
T Consensus 111 ------~~~D~v~~~~p~~~~~---~~-----------------~~~~~l~~~~~~l--~~--~~~~~-~~~~~~~~~~~ 159 (207)
T 1wy7_A 111 ------SRVDIVIMNPPFGSQR---KH-----------------ADRPFLLKAFEIS--DV--VYSIH-LAKPEVRRFIE 159 (207)
T ss_dssp ------CCCSEEEECCCCSSSS---TT-----------------TTHHHHHHHHHHC--SE--EEEEE-ECCHHHHHHHH
T ss_pred ------CCCCEEEEcCCCcccc---CC-----------------chHHHHHHHHHhc--Cc--EEEEE-eCCcCCHHHHH
Confidence 4799999999976221 00 1234677788777 43 66667 33556777788
Q ss_pred HHHhhCCCcE
Q psy15212 289 IFSKNHKDSI 298 (329)
Q Consensus 289 ~~l~~~~~~~ 298 (329)
.+++++ ++.
T Consensus 160 ~~l~~~-g~~ 168 (207)
T 1wy7_A 160 KFSWEH-GFV 168 (207)
T ss_dssp HHHHHT-TEE
T ss_pred HHHHHC-CCe
Confidence 888776 444
No 67
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.50 E-value=6e-14 Score=122.45 Aligned_cols=108 Identities=15% Similarity=0.092 Sum_probs=84.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhccccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
++.+|||+|||+|..+..+++....+|+++|+|+.+++.+++|++..++. ++++.+|+.... .
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~----------------~ 117 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL----------------A 117 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHH----------------S
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHH----------------h
Confidence 67899999999999999887764469999999999999999999999984 899999987642 1
Q ss_pred ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHH--HhcCCCCCEEEEEcCCCC
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL--WKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a--~~~LkpgG~lvysTCS~~ 279 (329)
...+.||+|++|||+. .+. ..++++.. .++|+|||++++++|+..
T Consensus 118 -~~~~~fD~V~~~~p~~-~~~----------------------~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 118 -QKGTPHNIVFVDPPFR-RGL----------------------LEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp -SCCCCEEEEEECCSSS-TTT----------------------HHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred -hcCCCCCEEEECCCCC-CCc----------------------HHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 1346899999999943 110 12234444 346999999999988643
No 68
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.50 E-value=1.7e-13 Score=123.01 Aligned_cols=111 Identities=18% Similarity=0.245 Sum_probs=92.3
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.+.++.+|||+|||+|..+..+++..+++|+|+|+|+.+++.+++++...|+. ++++.+|+..++
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------------- 109 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP------------- 109 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS-------------
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-------------
Confidence 56788999999999999999999987779999999999999999999999986 899999997765
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCc
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF 280 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~ 280 (329)
+.++.||+|++..... . . . ..++|+.+.++|||||+++++++++..
T Consensus 110 -----~~~~~fD~v~~~~~l~------~------~-~----------~~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 110 -----FQNEELDLIWSEGAIY------N------I-G----------FERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp -----SCTTCEEEEEEESCSC------C------C-C----------HHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred -----CCCCCEEEEEecChHh------h------c-C----------HHHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 3457899999764322 1 0 1 235799999999999999999865433
No 69
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.50 E-value=1.1e-13 Score=117.40 Aligned_cols=110 Identities=17% Similarity=0.162 Sum_probs=86.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
..++.+|||+|||+|..+..+++....+|+++|+++.+++.++++++..++. ++++.+|+.+..
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------------- 94 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI-------------- 94 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH--------------
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH--------------
Confidence 5678899999999999999999873369999999999999999999999985 899999987742
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHH--HhcCCCCCEEEEEcCCCC
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL--WKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a--~~~LkpgG~lvysTCS~~ 279 (329)
. ...+.||+|++|||+.. + . ..++++.. .++|+|||++++++++-.
T Consensus 95 --~-~~~~~fD~i~~~~~~~~-~------------------~----~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 95 --D-CLTGRFDLVFLDPPYAK-E------------------T----IVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp --H-HBCSCEEEEEECCSSHH-H------------------H----HHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred --H-hhcCCCCEEEECCCCCc-c------------------h----HHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 1 12357999999999641 0 0 12233333 489999999999887644
No 70
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.50 E-value=2e-13 Score=130.42 Aligned_cols=129 Identities=17% Similarity=0.117 Sum_probs=99.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCC--ceEEEecCccccchhhhhhhhccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNL--KATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~--~v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
..++.+|||+|||+|+.+..++.... ++|+|+|+|+.+++.+++|++..|+ .+++.++|+.+++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~------------- 281 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS------------- 281 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG-------------
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-------------
Confidence 67899999999999999999998755 5999999999999999999999999 3899999998875
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHH
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQ 286 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~v 286 (329)
...+.||+|++|||+.-. ......+..++.++++.+.+.| ||.++|.||+ .+.
T Consensus 282 -----~~~~~fD~Ii~npPyg~r--------------~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~------~~~ 334 (373)
T 3tm4_A 282 -----QYVDSVDFAISNLPYGLK--------------IGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE------KKA 334 (373)
T ss_dssp -----GTCSCEEEEEEECCCC--------------------CCHHHHHHHHHHHHHHHE--EEEEEEEESC------HHH
T ss_pred -----cccCCcCEEEECCCCCcc--------------cCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC------HHH
Confidence 234789999999997520 0111224455778899999888 7888888883 344
Q ss_pred HHHHHhhCCCcEE
Q psy15212 287 AIIFSKNHKDSIR 299 (329)
Q Consensus 287 v~~~l~~~~~~~~ 299 (329)
+...+.+. +++.
T Consensus 335 ~~~~~~~~-G~~~ 346 (373)
T 3tm4_A 335 IEEAIAEN-GFEI 346 (373)
T ss_dssp HHHHHHHT-TEEE
T ss_pred HHHHHHHc-CCEE
Confidence 55555554 4543
No 71
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.49 E-value=6.3e-14 Score=125.54 Aligned_cols=166 Identities=13% Similarity=0.125 Sum_probs=112.2
Q ss_pred ceEEEe-chhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHh---C-C-CEEEEEeCChhHHHHHHHHHHHcCCceEEE
Q psy15212 112 GFCSIQ-DAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEI---A-D-IKLISVDNNLSRLNMISENLKRLNLKATLI 185 (329)
Q Consensus 112 G~~~~Q-d~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~---~-~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~ 185 (329)
|....| .....+...++...++.+|||+|||+|..+..+++. + + ++|+|+|+++.+++.++ ..+-.++++
T Consensus 60 ~~~~~~~p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~~~v~~~ 135 (236)
T 2bm8_A 60 GLRMLKDPDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDMENITLH 135 (236)
T ss_dssp TEECCSCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGCTTEEEE
T ss_pred cccccCCHHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccCCceEEE
Confidence 334445 333344444555556789999999999999999987 2 3 79999999999988776 223348999
Q ss_pred ecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHh-c
Q psy15212 186 LSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWK-M 264 (329)
Q Consensus 186 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~-~ 264 (329)
++|+..... ++......||.|++|..- . ...++|..+.+ .
T Consensus 136 ~gD~~~~~~--------------l~~~~~~~fD~I~~d~~~---------~----------------~~~~~l~~~~r~~ 176 (236)
T 2bm8_A 136 QGDCSDLTT--------------FEHLREMAHPLIFIDNAH---------A----------------NTFNIMKWAVDHL 176 (236)
T ss_dssp ECCSSCSGG--------------GGGGSSSCSSEEEEESSC---------S----------------SHHHHHHHHHHHT
T ss_pred ECcchhHHH--------------HHhhccCCCCEEEECCch---------H----------------hHHHHHHHHHHhh
Confidence 999987410 011123479999998641 0 02357888886 9
Q ss_pred CCCCCEEEEEcC-CCCccccHHHHHHHHhhCC-CcEEecCCCcccCCCCCCCCCCeEEEEEEE
Q psy15212 265 LKPGGKLLFVTC-SLWFEESEEQAIIFSKNHK-DSIRLNSPGQLLPTVNKKQDYDGFFYSLFQ 325 (329)
Q Consensus 265 LkpgG~lvysTC-S~~~~Ene~vv~~~l~~~~-~~~~~~~~~~~~p~~~~~~~~~gff~a~l~ 325 (329)
|||||+|++... .+.+..+.+.+..+++.++ +|.........+ . ...+||+...-.
T Consensus 177 LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~~~~~--~---~~~~g~~~~~~~ 234 (236)
T 2bm8_A 177 LEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDMLYANAS--S---QLDRGVLRRVAA 234 (236)
T ss_dssp CCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEETTTTTSC--T---TTTTCEEEECC-
T ss_pred CCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEcchhhccc--c---cccchHhhhccc
Confidence 999999998753 4445667778999999988 777654321111 1 355787765433
No 72
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.49 E-value=1.6e-13 Score=131.51 Aligned_cols=114 Identities=24% Similarity=0.329 Sum_probs=94.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.+++|++.+++.++++.+|+....
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~----------------- 293 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL----------------- 293 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS-----------------
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc-----------------
Confidence 46889999999999999999986 569999999999999999999999988999999998764
Q ss_pred ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCc
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF 280 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~ 280 (329)
...+.||.|++|||+...+.. .. ....++++.+.+.|||||+++++++...+
T Consensus 294 -~~~~~fD~Ii~npp~~~~~~~----------~~-------~~~~~~l~~~~~~LkpGG~l~iv~n~~l~ 345 (381)
T 3dmg_A 294 -TEEARFDIIVTNPPFHVGGAV----------IL-------DVAQAFVNVAAARLRPGGVFFLVSNPFLK 345 (381)
T ss_dssp -CTTCCEEEEEECCCCCTTCSS----------CC-------HHHHHHHHHHHHHEEEEEEEEEEECTTSC
T ss_pred -ccCCCeEEEEECCchhhcccc----------cH-------HHHHHHHHHHHHhcCcCcEEEEEEcCCCC
Confidence 134689999999997632211 01 12456899999999999999999877654
No 73
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.49 E-value=4.2e-13 Score=119.70 Aligned_cols=121 Identities=17% Similarity=0.220 Sum_probs=100.1
Q ss_pred EechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccch
Q psy15212 116 IQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINL 194 (329)
Q Consensus 116 ~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~ 194 (329)
-|++++......+++.++.+|||+|||+|..+..+++... +|+++|+++.+++.+++++...++. ++++.+|+..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 82 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP- 82 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-
Confidence 4788999999999999999999999999999999998764 9999999999999999999998886 899999988764
Q ss_pred hhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 195 KKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
+.++.||+|++.-. +.+-++ ...+|+++.++|||||+++++
T Consensus 83 -----------------~~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 83 -----------------FPDDSFDIITCRYA------AHHFSD----------------VRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp -----------------SCTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------------CCCCcEEEEEECCc------hhhccC----------------HHHHHHHHHHHcCCCcEEEEE
Confidence 34578999997532 111111 246799999999999999987
Q ss_pred cCC
Q psy15212 275 TCS 277 (329)
Q Consensus 275 TCS 277 (329)
+..
T Consensus 124 ~~~ 126 (239)
T 1xxl_A 124 DHY 126 (239)
T ss_dssp EEC
T ss_pred EcC
Confidence 654
No 74
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.49 E-value=4e-13 Score=117.61 Aligned_cols=137 Identities=20% Similarity=0.182 Sum_probs=105.7
Q ss_pred HhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhh
Q psy15212 124 AAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYID 200 (329)
Q Consensus 124 ~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~ 200 (329)
....+.+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...++. ++++.+|+....
T Consensus 29 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~------- 101 (219)
T 3dh0_A 29 VLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP------- 101 (219)
T ss_dssp HHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS-------
T ss_pred HHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC-------
Confidence 34455678899999999999999999999862 69999999999999999999999986 899999988764
Q ss_pred hcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCc
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF 280 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~ 280 (329)
+.++.||.|++... +..-++ ...+|+.+.++|+|||+++++++....
T Consensus 102 -----------~~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~i~~~~~~~ 148 (219)
T 3dh0_A 102 -----------LPDNTVDFIFMAFT------FHELSE----------------PLKFLEELKRVAKPFAYLAIIDWKKEE 148 (219)
T ss_dssp -----------SCSSCEEEEEEESC------GGGCSS----------------HHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred -----------CCCCCeeEEEeehh------hhhcCC----------------HHHHHHHHHHHhCCCeEEEEEEecccc
Confidence 34578999997532 211111 246899999999999999998755332
Q ss_pred c---------ccHHHHHHHHhhCCCcEEec
Q psy15212 281 E---------ESEEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 281 ~---------Ene~vv~~~l~~~~~~~~~~ 301 (329)
. -+.+.+...+++. +|+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~ 177 (219)
T 3dh0_A 149 RDKGPPPEEVYSEWEVGLILEDA-GIRVGR 177 (219)
T ss_dssp CSSSCCGGGSCCHHHHHHHHHHT-TCEEEE
T ss_pred cccCCchhcccCHHHHHHHHHHC-CCEEEE
Confidence 2 2356677777776 676554
No 75
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.49 E-value=8.7e-14 Score=121.30 Aligned_cols=120 Identities=21% Similarity=0.164 Sum_probs=97.8
Q ss_pred cceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCc
Q psy15212 111 NGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDI 189 (329)
Q Consensus 111 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~ 189 (329)
.|.+..+..........+.+.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++++++|+. ++++.+|+
T Consensus 56 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~ 134 (210)
T 3lbf_A 56 QGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDG 134 (210)
T ss_dssp TSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred CCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCc
Confidence 3556667666677777788899999999999999999999988 569999999999999999999999986 89999998
Q ss_pred cccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCC
Q psy15212 190 SKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG 269 (329)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG 269 (329)
.... ...+.||+|+++..+.. -| ..+.++|||||
T Consensus 135 ~~~~------------------~~~~~~D~i~~~~~~~~------~~----------------------~~~~~~L~pgG 168 (210)
T 3lbf_A 135 WQGW------------------QARAPFDAIIVTAAPPE------IP----------------------TALMTQLDEGG 168 (210)
T ss_dssp GGCC------------------GGGCCEEEEEESSBCSS------CC----------------------THHHHTEEEEE
T ss_pred ccCC------------------ccCCCccEEEEccchhh------hh----------------------HHHHHhcccCc
Confidence 7743 13468999999865421 11 13577899999
Q ss_pred EEEEEcCC
Q psy15212 270 KLLFVTCS 277 (329)
Q Consensus 270 ~lvysTCS 277 (329)
+++.+...
T Consensus 169 ~lv~~~~~ 176 (210)
T 3lbf_A 169 ILVLPVGE 176 (210)
T ss_dssp EEEEEECS
T ss_pred EEEEEEcC
Confidence 99998765
No 76
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.49 E-value=2.5e-13 Score=122.94 Aligned_cols=111 Identities=21% Similarity=0.285 Sum_probs=92.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
+.++.+|||+|||+|..+..+++..+++|+|+|+|+.+++.++++++..|+. ++++.+|+..++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------------- 109 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP-------------- 109 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--------------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC--------------
Confidence 6789999999999999999999874469999999999999999999999985 899999998765
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCcc
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE 281 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~ 281 (329)
+..+.||+|++....... . ...+|+.+.++|||||+++++++++...
T Consensus 110 ----~~~~~fD~i~~~~~~~~~-------------~----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 156 (267)
T 3kkz_A 110 ----FRNEELDLIWSEGAIYNI-------------G----------FERGLNEWRKYLKKGGYLAVSECSWFTD 156 (267)
T ss_dssp ----CCTTCEEEEEESSCGGGT-------------C----------HHHHHHHHGGGEEEEEEEEEEEEEESSS
T ss_pred ----CCCCCEEEEEEcCCceec-------------C----------HHHHHHHHHHHcCCCCEEEEEEeeecCC
Confidence 245789999976543211 1 2457999999999999999998765443
No 77
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.48 E-value=1.4e-13 Score=134.52 Aligned_cols=170 Identities=19% Similarity=0.198 Sum_probs=119.8
Q ss_pred cceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhC-------------C-CEEEEEeCChhHHHHHHHHHH
Q psy15212 111 NGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIA-------------D-IKLISVDNNLSRLNMISENLK 176 (329)
Q Consensus 111 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~-------------~-~~v~avD~~~~rl~~l~~n~~ 176 (329)
.|.++--..-+.+.+.++.+.++.+|||+|||+|+.++.+++.+ . ..++|+|+++.+++.++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 46666555666777788889999999999999999999998763 2 589999999999999999999
Q ss_pred HcCC---ceEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccC---CCCcccCChhHHHHH
Q psy15212 177 RLNL---KATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRN---PDIPWLRRKNDIKKL 250 (329)
Q Consensus 177 ~~g~---~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~---p~~~~~~~~~~~~~l 250 (329)
..|+ .+.+.++|+.... ...+||+|++|||+++....... .+..+..+
T Consensus 230 l~g~~~~~~~i~~gD~l~~~-------------------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~------- 283 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKE-------------------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETK------- 283 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSC-------------------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCS-------
T ss_pred HhCCCcCCCCEeeCCCCCCc-------------------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCc-------
Confidence 8888 5788999987654 12489999999999876543221 11111111
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEcCC--CCcccc-HHHHHHHHhhCCCcE-EecCCCcccC
Q psy15212 251 SKYSCKILNNLWKMLKPGGKLLFVTCS--LWFEES-EEQAIIFSKNHKDSI-RLNSPGQLLP 308 (329)
Q Consensus 251 ~~~q~~lL~~a~~~LkpgG~lvysTCS--~~~~En-e~vv~~~l~~~~~~~-~~~~~~~~~p 308 (329)
..+..++.+++++|||||++++.++. +..... +.+.+++++.+ .+. .+..|..+++
T Consensus 284 -~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~-~l~~ii~lp~~~F~ 343 (445)
T 2okc_A 284 -NNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQDF-NLHTILRLPTGIFY 343 (445)
T ss_dssp -CHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHE-EEEEEEECCSSSSS
T ss_pred -chHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHHHhcC-cEEEEEeCCCCCcc
Confidence 12457899999999999999988754 222222 33444556554 332 3334444454
No 78
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.48 E-value=8.9e-14 Score=122.88 Aligned_cols=157 Identities=17% Similarity=0.129 Sum_probs=109.6
Q ss_pred hhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccch
Q psy15212 119 AAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINL 194 (329)
Q Consensus 119 ~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~ 194 (329)
....+...++...++.+|||+|||+|..+..+++.++ ++|+++|+++.+++.++++++..|+. ++++.+|+....
T Consensus 56 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 134 (229)
T 2avd_A 56 EQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETL- 134 (229)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHH-
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHH-
Confidence 3344445555556788999999999999999998764 69999999999999999999999983 899999986542
Q ss_pred hhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 195 KKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
..+. .....+.||.|++|++.. .+..+++.+.++|+|||.+++.
T Consensus 135 ~~~~-----------~~~~~~~~D~v~~d~~~~-------------------------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 135 DELL-----------AAGEAGTFDVAVVDADKE-------------------------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp HHHH-----------HTTCTTCEEEEEECSCST-------------------------THHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHH-----------hcCCCCCccEEEECCCHH-------------------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 0000 000015799999998722 1345788999999999999997
Q ss_pred cCCCCc--------cccHHHHHHHH---hhCCCcEEecCCCcccCCCCCCCCCCeEEEEE
Q psy15212 275 TCSLWF--------EESEEQAIIFS---KNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 323 (329)
Q Consensus 275 TCS~~~--------~Ene~vv~~~l---~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~ 323 (329)
.+.+.. .+....+..|. ..++++... ++| ..||+.+|+
T Consensus 179 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~lp------~~dGl~~~~ 227 (229)
T 2avd_A 179 RVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYIS-----LLP------LGDGLTLAF 227 (229)
T ss_dssp CCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEE-----EEC------STTCEEEEE
T ss_pred CCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEE-----EEe------cCCceEEEE
Confidence 765321 12233444443 345555443 233 348998875
No 79
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.48 E-value=3.3e-13 Score=124.45 Aligned_cols=105 Identities=14% Similarity=0.210 Sum_probs=86.7
Q ss_pred hhcCCCCCCeEEeecCCCchHHHH-HHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhcc
Q psy15212 126 PLLDIRSGMYVLDACSAPGGKTCH-LLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 126 ~~l~~~~g~~VLDlcag~G~kt~~-la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
.++++++|++|||+|||+|+.+.. +|+..+++|+|+|+|+.+++.+++++++.|+. ++++.+|+..++
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~---------- 185 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID---------- 185 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG----------
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC----------
Confidence 356789999999999999988755 45545689999999999999999999999985 899999998754
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
++.||+|+++.-. ++ ..++++++.+.|||||+|+..+
T Consensus 186 ----------d~~FDvV~~~a~~---------~d----------------~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 186 ----------GLEFDVLMVAALA---------EP----------------KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp ----------GCCCSEEEECTTC---------SC----------------HHHHHHHHHHHCCTTCEEEEEE
T ss_pred ----------CCCcCEEEECCCc---------cC----------------HHHHHHHHHHHcCCCcEEEEEc
Confidence 3689999975420 11 3468999999999999999875
No 80
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.48 E-value=2.6e-14 Score=127.88 Aligned_cols=113 Identities=18% Similarity=0.120 Sum_probs=90.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
..+|.+|||+|||+|..+.++++..+.+++++|+|+.+++.++++.+..+..++++.+|+....
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~---------------- 121 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA---------------- 121 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG----------------
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhc----------------
Confidence 4678899999999999999999866679999999999999999999998888899999987653
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
..+.++.||.|+.|+..+..... .......+++++.++|||||+|+|.+
T Consensus 122 ~~~~~~~FD~i~~D~~~~~~~~~-----------------~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 122 PTLPDGHFDGILYDTYPLSEETW-----------------HTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp GGSCTTCEEEEEECCCCCBGGGT-----------------TTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccccccCCceEEEeeeecccchh-----------------hhcchhhhhhhhhheeCCCCEEEEEe
Confidence 12356789999999865432221 01124568899999999999999854
No 81
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.47 E-value=1.1e-13 Score=130.41 Aligned_cols=100 Identities=20% Similarity=0.305 Sum_probs=88.1
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.+|++|||+|||+|+.++. |. .+.+|+|+|+|+.+++.+++|++.+|+. ++++.+|+..+.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--------------- 256 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--------------- 256 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---------------
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---------------
Confidence 5789999999999999999 87 3479999999999999999999999983 899999987642
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
+.||.|++|||..+. +++..+.++|+|||.++|++|+-.
T Consensus 257 ------~~fD~Vi~dpP~~~~--------------------------~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 257 ------VKGNRVIMNLPKFAH--------------------------KFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp ------CCEEEEEECCTTTGG--------------------------GGHHHHHHHEEEEEEEEEEEEESS
T ss_pred ------CCCcEEEECCcHhHH--------------------------HHHHHHHHHcCCCCEEEEEEeecC
Confidence 679999999997632 468888999999999999999877
No 82
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.47 E-value=5.6e-13 Score=119.60 Aligned_cols=111 Identities=23% Similarity=0.288 Sum_probs=92.6
Q ss_pred HHHhhhcCCCCCCeEEeecCCCchHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHc-CCc-eEEEecCccccchhhh
Q psy15212 122 QLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIA--DIKLISVDNNLSRLNMISENLKRL-NLK-ATLILSDISKINLKKL 197 (329)
Q Consensus 122 ~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~--~~~v~avD~~~~rl~~l~~n~~~~-g~~-v~~~~~D~~~~~~~~~ 197 (329)
..+...+++.++++|||+|||+|..+..+++.. +++|+++|+++.+++.++++++.. |.. ++++.+|+...+
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~---- 161 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE---- 161 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC----
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC----
Confidence 445556778899999999999999999999984 379999999999999999999988 754 889999987653
Q ss_pred hhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 198 YIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+..+.||.|++|+|.. ..+|+++.++|+|||++++.+.+
T Consensus 162 --------------~~~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 162 --------------LEEAAYDGVALDLMEP---------------------------WKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp --------------CCTTCEEEEEEESSCG---------------------------GGGHHHHHHHEEEEEEEEEEESC
T ss_pred --------------CCCCCcCEEEECCcCH---------------------------HHHHHHHHHhCCCCCEEEEEeCC
Confidence 2346899999998733 14688899999999999987654
No 83
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.47 E-value=5.1e-13 Score=118.20 Aligned_cols=140 Identities=10% Similarity=0.145 Sum_probs=99.5
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.++.+|||+|||+|..+..+|+..+ ..|+|+|+++.+++.+++++++.|+. ++++.+|+..+. +
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l-~------------- 98 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVL-H------------- 98 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHH-H-------------
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHH-H-------------
Confidence 3678999999999999999999876 79999999999999999999999986 899999988742 0
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHH
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAI 288 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~ 288 (329)
..+.++.||.|++.-|.. |........++ .|..+++.+.+.|||||+++++|-. ..--+.+.
T Consensus 99 -~~~~~~~~d~v~~~~~~p------------~~~~~~~~rr~--~~~~~l~~~~r~LkpGG~l~i~td~---~~~~~~~~ 160 (218)
T 3dxy_A 99 -KMIPDNSLRMVQLFFPDP------------WHKARHNKRRI--VQVPFAELVKSKLQLGGVFHMATDW---EPYAEHML 160 (218)
T ss_dssp -HHSCTTCEEEEEEESCCC------------CCSGGGGGGSS--CSHHHHHHHHHHEEEEEEEEEEESC---HHHHHHHH
T ss_pred -HHcCCCChheEEEeCCCC------------ccchhhhhhhh--hhHHHHHHHHHHcCCCcEEEEEeCC---HHHHHHHH
Confidence 113467899999974422 11000000000 1345899999999999999988643 11122233
Q ss_pred HHHhhCCCcEEecC
Q psy15212 289 IFSKNHKDSIRLNS 302 (329)
Q Consensus 289 ~~l~~~~~~~~~~~ 302 (329)
..+..+++++.+..
T Consensus 161 ~~~~~~~~~~~~~~ 174 (218)
T 3dxy_A 161 EVMSSIDGYKNLSE 174 (218)
T ss_dssp HHHHTSTTEEECCT
T ss_pred HHHHhCCCcccccC
Confidence 44555667765543
No 84
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.47 E-value=2.4e-13 Score=126.29 Aligned_cols=115 Identities=10% Similarity=0.119 Sum_probs=93.7
Q ss_pred HHHhhhcC-CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhh
Q psy15212 122 QLAAPLLD-IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLY 198 (329)
Q Consensus 122 ~l~~~~l~-~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~ 198 (329)
..+...+. +.++.+|||+|||+|..+..+++..+.+|+|+|+++.+++.++++++..|+. ++++.+|+..++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----- 180 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP----- 180 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-----
Confidence 34455555 7889999999999999999999875679999999999999999999999986 899999998764
Q ss_pred hhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 199 IDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+.++.||+|++.- ++..- . +..+|+.+.++|||||++++++..
T Consensus 181 -------------~~~~~fD~V~~~~------~l~~~-------~----------~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 181 -------------FDKGAVTASWNNE------STMYV-------D----------LHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp -------------CCTTCEEEEEEES------CGGGS-------C----------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -------------CCCCCEeEEEECC------chhhC-------C----------HHHHHHHHHHHcCCCcEEEEEEcc
Confidence 3457899999632 11110 0 457899999999999999998743
No 85
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.46 E-value=2.2e-13 Score=119.18 Aligned_cols=162 Identities=20% Similarity=0.213 Sum_probs=114.3
Q ss_pred hhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhh
Q psy15212 119 AAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLY 198 (329)
Q Consensus 119 ~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~ 198 (329)
.-..+...++...++.+|||+|||+|..+..+++.. .+|+|+|+++.+++.+++++...+ .++++.+|+..+.
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~----- 110 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKRWS-HISWAATDILQFS----- 110 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTTCS-SEEEEECCTTTCC-----
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcccCC-CeEEEEcchhhCC-----
Confidence 334455556667788899999999999999999864 599999999999999999987754 5889999988764
Q ss_pred hhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC--
Q psy15212 199 IDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC-- 276 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC-- 276 (329)
..++||+|++.. ++.+-++ .+ ...++|+.+.++|||||++++++.
T Consensus 111 --------------~~~~fD~v~~~~------~l~~~~~------~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 111 --------------TAELFDLIVVAE------VLYYLED------MT-------QMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp --------------CSCCEEEEEEES------CGGGSSS------HH-------HHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred --------------CCCCccEEEEcc------HHHhCCC------HH-------HHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 357899999752 2222111 11 134679999999999999999762
Q ss_pred ----CCCccccHHHHHHHHhhC-CCcEEecCCCcccCCCCCCCCCCeEEEEEEEecC
Q psy15212 277 ----SLWFEESEEQAIIFSKNH-KDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKRK 328 (329)
Q Consensus 277 ----S~~~~Ene~vv~~~l~~~-~~~~~~~~~~~~~p~~~~~~~~~gff~a~l~k~~ 328 (329)
++....+.+.+..++... ..++.+.. .+. +...+|++++++|.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-----~~~---~~~~d~~l~~~~~~~ 206 (216)
T 3ofk_A 158 ATCRRWGHVAGAETVITILTEALTEVERVQC-----QGQ---SADEDCLLARFRNPE 206 (216)
T ss_dssp HHHHHTTCSCCHHHHHHHHHHHSEEEEEEEE-----ECS---STTCEEEEEEEECCC
T ss_pred CcchhhhhhhhHHHHHHHHHhhccceEEEec-----cCC---ccccchhHHHHhCCc
Confidence 233345555555555443 22232221 112 567899999998753
No 86
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.46 E-value=4.6e-13 Score=117.79 Aligned_cols=107 Identities=22% Similarity=0.225 Sum_probs=81.5
Q ss_pred cCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccc
Q psy15212 128 LDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 128 l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
+.+++|++|||+|||+|..+.++++..+ ++|+|+|+|+.+++.+.++.++. -.+.++.+|+....
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~------------- 118 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPW------------- 118 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGG-------------
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCch-------------
Confidence 3467899999999999999999999875 79999999999998777776653 24777888887642
Q ss_pred ccccc-cCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 207 NRFRF-YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 207 ~~~~~-~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
.+ ...+.||.|++|.+ +| . ....+++++.++|||||+++++.
T Consensus 119 ---~~~~~~~~fD~V~~~~~---------~~--------~-------~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 119 ---KYSGIVEKVDLIYQDIA---------QK--------N-------QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp ---GTTTTCCCEEEEEECCC---------ST--------T-------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---hhcccccceeEEEEecc---------Ch--------h-------HHHHHHHHHHHHhCCCCEEEEEE
Confidence 00 11368999998832 11 0 01235889999999999999984
No 87
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.46 E-value=2.8e-13 Score=115.46 Aligned_cols=114 Identities=19% Similarity=0.173 Sum_probs=86.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
..++.+|||+|||+|..+..+++....+|+++|+++.+++.+++|++..++. ++++.+|+.+... .+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~---------- 110 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE-QF---------- 110 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH-HH----------
T ss_pred hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH-HH----------
Confidence 3578899999999999999988854379999999999999999999999984 8999999876430 00
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHH--HHhcCCCCCEEEEEcCCCCc
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNN--LWKMLKPGGKLLFVTCSLWF 280 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~--a~~~LkpgG~lvysTCS~~~ 280 (329)
. ...+.||+|++|||+. .+ .. ...+.. +.++|+|||++++++++...
T Consensus 111 --~-~~~~~fD~i~~~~~~~-~~------------~~----------~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 111 --Y-EEKLQFDLVLLDPPYA-KQ------------EI----------VSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp --H-HTTCCEEEEEECCCGG-GC------------CH----------HHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred --H-hcCCCCCEEEECCCCC-ch------------hH----------HHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 0 1246899999999954 10 01 111222 38899999999999887543
No 88
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.46 E-value=3.9e-13 Score=121.08 Aligned_cols=131 Identities=13% Similarity=0.262 Sum_probs=96.3
Q ss_pred CCcccccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eE
Q psy15212 105 KIPKFFNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-AT 183 (329)
Q Consensus 105 ~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~ 183 (329)
..+.|.......|..........+.+.++.+|||+|||+|..+..+++..+ +|+++|+|+.+++.+++++...|+. +.
T Consensus 10 ~~~~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~ 88 (260)
T 1vl5_A 10 HHHMYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVE 88 (260)
T ss_dssp -------------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEE
T ss_pred cceeeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceE
Confidence 346677777777888877778888888999999999999999999998765 9999999999999999999998876 89
Q ss_pred EEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHh
Q psy15212 184 LILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWK 263 (329)
Q Consensus 184 ~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~ 263 (329)
++.+|+..++ +.++.||+|++... +..-++ ...+|+++.+
T Consensus 89 ~~~~d~~~l~------------------~~~~~fD~V~~~~~------l~~~~d----------------~~~~l~~~~r 128 (260)
T 1vl5_A 89 YVQGDAEQMP------------------FTDERFHIVTCRIA------AHHFPN----------------PASFVSEAYR 128 (260)
T ss_dssp EEECCC-CCC------------------SCTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHH
T ss_pred EEEecHHhCC------------------CCCCCEEEEEEhhh------hHhcCC----------------HHHHHHHHHH
Confidence 9999998765 34578999996422 111111 2367999999
Q ss_pred cCCCCCEEEEEcC
Q psy15212 264 MLKPGGKLLFVTC 276 (329)
Q Consensus 264 ~LkpgG~lvysTC 276 (329)
+|||||++++++.
T Consensus 129 ~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 129 VLKKGGQLLLVDN 141 (260)
T ss_dssp HEEEEEEEEEEEE
T ss_pred HcCCCCEEEEEEc
Confidence 9999999998743
No 89
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.46 E-value=2.5e-13 Score=123.96 Aligned_cols=111 Identities=23% Similarity=0.366 Sum_probs=93.1
Q ss_pred HHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCC-c-eEEEecCccccchhhh
Q psy15212 122 QLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNL-K-ATLILSDISKINLKKL 197 (329)
Q Consensus 122 ~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~-~-v~~~~~D~~~~~~~~~ 197 (329)
..+...+++.+|.+|||+|||+|..+..+++..+ ++|+++|+++.+++.+++|++..++ . ++++.+|+....
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---- 177 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF---- 177 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC----
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc----
Confidence 3445566788999999999999999999999843 7999999999999999999999998 3 889999987642
Q ss_pred hhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 198 YIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
..+.||+|++|+|+. .++|+.+.++|+|||++++.+++
T Consensus 178 ---------------~~~~~D~V~~~~~~~---------------------------~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 178 ---------------DEKDVDALFLDVPDP---------------------------WNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp ---------------SCCSEEEEEECCSCG---------------------------GGTHHHHHHHEEEEEEEEEEESS
T ss_pred ---------------cCCccCEEEECCcCH---------------------------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 346799999999854 14688889999999999998765
Q ss_pred C
Q psy15212 278 L 278 (329)
Q Consensus 278 ~ 278 (329)
.
T Consensus 216 ~ 216 (277)
T 1o54_A 216 T 216 (277)
T ss_dssp H
T ss_pred H
Confidence 3
No 90
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.45 E-value=4.9e-13 Score=119.84 Aligned_cols=114 Identities=19% Similarity=0.168 Sum_probs=92.5
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhh
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYID 200 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~ 200 (329)
.+...+.+.++.+|||+|||+|..+..+++..+.+|+++|+|+.+++.++++++..|+. ++++.+|+....
T Consensus 27 ~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~------- 99 (256)
T 1nkv_A 27 TLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV------- 99 (256)
T ss_dssp HHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-------
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC-------
Confidence 33445667889999999999999999999887779999999999999999999999885 899999998765
Q ss_pred hcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
. ++.||+|++. +++..-++ ..++|+++.++|||||++++++..
T Consensus 100 -----------~-~~~fD~V~~~------~~~~~~~~----------------~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 100 -----------A-NEKCDVAACV------GATWIAGG----------------FAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp -----------C-SSCEEEEEEE------SCGGGTSS----------------SHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred -----------c-CCCCCEEEEC------CChHhcCC----------------HHHHHHHHHHHcCCCeEEEEecCc
Confidence 2 5789999962 22222111 245799999999999999998643
No 91
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.45 E-value=3.7e-13 Score=122.60 Aligned_cols=115 Identities=22% Similarity=0.284 Sum_probs=93.9
Q ss_pred chhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHc-C--Cc-eEEEecCccc
Q psy15212 118 DAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIA--DIKLISVDNNLSRLNMISENLKRL-N--LK-ATLILSDISK 191 (329)
Q Consensus 118 d~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~--~~~v~avD~~~~rl~~l~~n~~~~-g--~~-v~~~~~D~~~ 191 (329)
......+...+++.+|++|||+|||+|..+.++++.. +++|+++|+++.+++.+++|++.. | .. ++++.+|+..
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 3344455666788899999999999999999999864 279999999999999999999988 6 33 8899999876
Q ss_pred cchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEE
Q psy15212 192 INLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKL 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~l 271 (329)
.. +..+.||.|++|+|.. .++|+++.++|+|||++
T Consensus 165 ~~------------------~~~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~pgG~l 199 (280)
T 1i9g_A 165 SE------------------LPDGSVDRAVLDMLAP---------------------------WEVLDAVSRLLVAGGVL 199 (280)
T ss_dssp CC------------------CCTTCEEEEEEESSCG---------------------------GGGHHHHHHHEEEEEEE
T ss_pred cC------------------CCCCceeEEEECCcCH---------------------------HHHHHHHHHhCCCCCEE
Confidence 54 2356899999987721 13688899999999999
Q ss_pred EEEcCC
Q psy15212 272 LFVTCS 277 (329)
Q Consensus 272 vysTCS 277 (329)
++++++
T Consensus 200 ~~~~~~ 205 (280)
T 1i9g_A 200 MVYVAT 205 (280)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 988765
No 92
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.45 E-value=4.7e-13 Score=121.03 Aligned_cols=133 Identities=20% Similarity=0.210 Sum_probs=101.0
Q ss_pred hHHHHhhhcC--CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhh
Q psy15212 120 AAQLAAPLLD--IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKL 197 (329)
Q Consensus 120 ~s~l~~~~l~--~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~ 197 (329)
+..+...++. +.++.+|||+|||+|..+..+++... +|+|+|+++.+++.+++|++.+++.+++..+|+....
T Consensus 106 tt~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~---- 180 (254)
T 2nxc_A 106 TTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAAL---- 180 (254)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHG----
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcC----
Confidence 3444444432 56789999999999999999888654 9999999999999999999999887888888876521
Q ss_pred hhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 198 YIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
..++||+|+++.+.. ....++..+.++|+|||+++++...
T Consensus 181 ---------------~~~~fD~Vv~n~~~~-------------------------~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 181 ---------------PFGPFDLLVANLYAE-------------------------LHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp ---------------GGCCEEEEEEECCHH-------------------------HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---------------cCCCCCEEEECCcHH-------------------------HHHHHHHHHHHHcCCCCEEEEEeec
Confidence 235799999876521 1246889999999999999987543
Q ss_pred CCccccHHHHHHHHhhCCCcEEec
Q psy15212 278 LWFEESEEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 278 ~~~~Ene~vv~~~l~~~~~~~~~~ 301 (329)
.+..+.+...++++ +++.+.
T Consensus 221 ---~~~~~~v~~~l~~~-Gf~~~~ 240 (254)
T 2nxc_A 221 ---KDRAPLVREAMAGA-GFRPLE 240 (254)
T ss_dssp ---GGGHHHHHHHHHHT-TCEEEE
T ss_pred ---cCCHHHHHHHHHHC-CCEEEE
Confidence 34455666667665 666654
No 93
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.44 E-value=3e-13 Score=127.61 Aligned_cols=126 Identities=18% Similarity=0.232 Sum_probs=101.6
Q ss_pred chhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhh
Q psy15212 118 DAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKK 196 (329)
Q Consensus 118 d~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~ 196 (329)
|..+.+....+.+.++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++++...++.++++.+|+....
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--- 258 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--- 258 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC---
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc---
Confidence 34566667777666788999999999999999999876 69999999999999999999999988888888876532
Q ss_pred hhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 197 LYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.+.||.|++++|... |. ........++++.+.+.|||||.+++.+.
T Consensus 259 -----------------~~~fD~Iv~~~~~~~-g~----------------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 259 -----------------KGRFDMIISNPPFHD-GM----------------QTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp -----------------CSCEEEEEECCCCCS-SS----------------HHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred -----------------cCCeeEEEECCCccc-Cc----------------cCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 468999999999641 11 01122356789999999999999999888
Q ss_pred CCCc
Q psy15212 277 SLWF 280 (329)
Q Consensus 277 S~~~ 280 (329)
+..+
T Consensus 305 ~~~~ 308 (343)
T 2pjd_A 305 AFLP 308 (343)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 7665
No 94
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.44 E-value=3.8e-13 Score=120.85 Aligned_cols=121 Identities=17% Similarity=0.162 Sum_probs=88.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHh--CC-CEEEEEeCChhHHHHHHHHHHHc---CCc-----------------------
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEI--AD-IKLISVDNNLSRLNMISENLKRL---NLK----------------------- 181 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~--~~-~~v~avD~~~~rl~~l~~n~~~~---g~~----------------------- 181 (329)
.++.+|||+|||+|..+..+++. .+ .+|+|+|+|+.+++.+++|+... ++.
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 45779999999999999999987 33 69999999999999999998876 541
Q ss_pred ----eE-------------EEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCCh
Q psy15212 182 ----AT-------------LILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRK 244 (329)
Q Consensus 182 ----v~-------------~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~ 244 (329)
++ +..+|+....... .......||+|++|||+.....+.+.
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~-------------~~~~~~~fD~Iv~npp~~~~~~~~~~--------- 187 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALS-------------AVLAGSAPDVVLTDLPYGERTHWEGQ--------- 187 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHH-------------HHHTTCCCSEEEEECCGGGSSSSSSC---------
T ss_pred hhhhhhhhccccccccccceeecccccccccc-------------cccCCCCceEEEeCCCeecccccccc---------
Confidence 44 8888877642000 00023479999999998754332210
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 245 NDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 245 ~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
.....+..+++.+.++|+|||+++++.++
T Consensus 188 ----~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 188 ----VPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp ----CCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred ----ccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 11234567899999999999999986555
No 95
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.43 E-value=4e-13 Score=120.58 Aligned_cols=166 Identities=13% Similarity=0.175 Sum_probs=110.8
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHc--------CCc-eEEEecCccc-cchhhhh
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRL--------NLK-ATLILSDISK-INLKKLY 198 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~--------g~~-v~~~~~D~~~-~~~~~~~ 198 (329)
+.++.+|||+|||+|..+..+|+..+ ..|+|+|+|+.+++.++++++.+ ++. ++++.+|+.. +.
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~----- 121 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLP----- 121 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGG-----
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHH-----
Confidence 35678999999999999999999876 69999999999999999999877 775 8999999986 32
Q ss_pred hhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 199 IDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
..+....+|.|++.-|..-... ++-. .+. .+..++..+.++|+|||.|+++|..
T Consensus 122 -----------~~~~~~~~d~v~~~~p~p~~k~--~~~~--~r~----------~~~~~l~~~~~~LkpgG~l~~~td~- 175 (246)
T 2vdv_E 122 -----------NFFEKGQLSKMFFCFPDPHFKQ--RKHK--ARI----------ITNTLLSEYAYVLKEGGVVYTITDV- 175 (246)
T ss_dssp -----------GTSCTTCEEEEEEESCCCC--------C--SSC----------CCHHHHHHHHHHEEEEEEEEEEESC-
T ss_pred -----------HhccccccCEEEEECCCccccc--chhH--Hhh----------ccHHHHHHHHHHcCCCCEEEEEecc-
Confidence 1234578999987655331100 0000 000 1357899999999999999986532
Q ss_pred CccccHHHHHHHHhhCCCcEEecCC--------CcccCCCC-C---CCCCCeEEEEEEEecC
Q psy15212 279 WFEESEEQAIIFSKNHKDSIRLNSP--------GQLLPTVN-K---KQDYDGFFYSLFQKRK 328 (329)
Q Consensus 279 ~~~Ene~vv~~~l~~~~~~~~~~~~--------~~~~p~~~-~---~~~~~gff~a~l~k~~ 328 (329)
++-.+.+...+..++.++.+... ..+.|... . ...+...|.+.++|..
T Consensus 176 --~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~t~~e~k~~~~g~~~~~~~~~k~~ 235 (246)
T 2vdv_E 176 --KDLHEWMVKHLEEHPLFERLSKEWEENDECVKIMRNATEEGKKVERKKGDKFVACFTRLP 235 (246)
T ss_dssp --HHHHHHHHHHHHHSTTEEECCHHHHHTCHHHHHHHHSSHHHHHHHHTTCCCEEEEEEECC
T ss_pred --HHHHHHHHHHHHhCcCeEecCccccccCcccccCCCCCHHHHHHHHCCCCeEEEEEEECC
Confidence 23333444445666666554321 01112110 0 1245678999999874
No 96
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.43 E-value=3.4e-13 Score=122.63 Aligned_cols=119 Identities=18% Similarity=0.270 Sum_probs=91.2
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC---CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccc
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD---IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISK 191 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~---~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~ 191 (329)
++....++... +++|.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.++++++..+.. ++++++|+.+
T Consensus 57 ~~~i~~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~ 134 (261)
T 4gek_A 57 ISMIGMLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD 134 (261)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT
T ss_pred HHHHHHHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc
Confidence 44444555444 46899999999999999999998764 59999999999999999999988874 8999999987
Q ss_pred cchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEE
Q psy15212 192 INLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKL 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~l 271 (329)
++ .+.||.|++.- ++..- ... ....+|+++.+.|||||+|
T Consensus 135 ~~--------------------~~~~d~v~~~~------~l~~~-------~~~-------~~~~~l~~i~~~LkpGG~l 174 (261)
T 4gek_A 135 IA--------------------IENASMVVLNF------TLQFL-------EPS-------ERQALLDKIYQGLNPGGAL 174 (261)
T ss_dssp CC--------------------CCSEEEEEEES------CGGGS-------CHH-------HHHHHHHHHHHHEEEEEEE
T ss_pred cc--------------------ccccccceeee------eeeec-------Cch-------hHhHHHHHHHHHcCCCcEE
Confidence 65 24699998631 21110 111 1245899999999999999
Q ss_pred EEEcCC
Q psy15212 272 LFVTCS 277 (329)
Q Consensus 272 vysTCS 277 (329)
+.+.-.
T Consensus 175 ii~e~~ 180 (261)
T 4gek_A 175 VLSEKF 180 (261)
T ss_dssp EEEEEB
T ss_pred EEEecc
Confidence 987543
No 97
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.42 E-value=3.8e-12 Score=113.09 Aligned_cols=124 Identities=17% Similarity=0.146 Sum_probs=98.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
+.+|++|||+|||+|..++.+|...+ .+|+|+|+++..++.+++|++++|+. ++++.+|+...-
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l------------- 79 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAF------------- 79 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-------------
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhc-------------
Confidence 46789999999999999999998765 69999999999999999999999995 899999986532
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHH
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQ 286 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~v 286 (329)
.....||.|++ .|.|- .+-.+||..+...|+++|+||.+.- .+.+.
T Consensus 80 -----~~~~~~D~Ivi----aG~Gg--------------------~~i~~Il~~~~~~L~~~~~lVlq~~-----~~~~~ 125 (225)
T 3kr9_A 80 -----EETDQVSVITI----AGMGG--------------------RLIARILEEGLGKLANVERLILQPN-----NREDD 125 (225)
T ss_dssp -----CGGGCCCEEEE----EEECH--------------------HHHHHHHHHTGGGCTTCCEEEEEES-----SCHHH
T ss_pred -----ccCcCCCEEEE----cCCCh--------------------HHHHHHHHHHHHHhCCCCEEEEECC-----CCHHH
Confidence 01236998885 23332 1245789999999999999998644 36677
Q ss_pred HHHHHhhCCCcEEec
Q psy15212 287 AIIFSKNHKDSIRLN 301 (329)
Q Consensus 287 v~~~l~~~~~~~~~~ 301 (329)
+..++..+ +|..+.
T Consensus 126 vr~~L~~~-Gf~i~~ 139 (225)
T 3kr9_A 126 LRIWLQDH-GFQIVA 139 (225)
T ss_dssp HHHHHHHT-TEEEEE
T ss_pred HHHHHHHC-CCEEEE
Confidence 77788877 666543
No 98
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.42 E-value=1.2e-13 Score=122.22 Aligned_cols=162 Identities=15% Similarity=0.164 Sum_probs=108.2
Q ss_pred CCCCCHHHHHHHHHHCCCeeEEeCCceEE-EcCCCCCCCCcccccc-------eEEEechhHHHHhhhc--CCCCCCeEE
Q psy15212 68 QRKTTLISYNKLLKKSGLETTIIGPLAIK-LHTPISISKIPKFFNG-------FCSIQDAAAQLAAPLL--DIRSGMYVL 137 (329)
Q Consensus 68 ~~k~~~~~~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~G-------~~~~Qd~~s~l~~~~l--~~~~g~~VL 137 (329)
....+.+.+.+.|.+.|+...+....++. ++.. .+.....|.+. ....|.........++ .+.++++||
T Consensus 11 ~~~~~~~~l~~~l~~~~~~~~~~~~~a~~~~~r~-~f~~~~~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VL 89 (227)
T 1r18_A 11 SVGANNEDLIRQLKDHGVIASDAVAQAMKETDRK-HYSPRNPYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKPGARIL 89 (227)
T ss_dssp CBCSSHHHHHHHHHHTTSCCCHHHHHHHHTSCGG-GTCSSCTTBSSCEEEETTEEECCHHHHHHHHHHTTTTCCTTCEEE
T ss_pred cCccHHHHHHHHHHhcCCCCCHHHHHHHHhCCHH-HcCCcccccCCCcccCCCCccCChHHHHHHHHHHHhhCCCCCEEE
Confidence 44567888888998888532110001110 0100 00000134333 3333444344445555 478899999
Q ss_pred eecCCCchHHHHHHHhCC-------CEEEEEeCChhHHHHHHHHHHHcC-----Cc-eEEEecCccccchhhhhhhhccc
Q psy15212 138 DACSAPGGKTCHLLEIAD-------IKLISVDNNLSRLNMISENLKRLN-----LK-ATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 138 Dlcag~G~kt~~la~~~~-------~~v~avD~~~~rl~~l~~n~~~~g-----~~-v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
|+|||+|..+..+++..+ ++|+++|+++.+++.+++++.+.+ .. ++++.+|+....
T Consensus 90 diG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~----------- 158 (227)
T 1r18_A 90 DVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY----------- 158 (227)
T ss_dssp EESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----------
T ss_pred EECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCC-----------
Confidence 999999999999998654 499999999999999999998876 33 889999987622
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
...+.||+|++++++.. +++.+.+.|||||+|+.++-
T Consensus 159 -------~~~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 159 -------PPNAPYNAIHVGAAAPD----------------------------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp -------GGGCSEEEEEECSCBSS----------------------------CCHHHHHTEEEEEEEEEEES
T ss_pred -------CcCCCccEEEECCchHH----------------------------HHHHHHHHhcCCCEEEEEEe
Confidence 12267999999887541 23567788999999998754
No 99
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.42 E-value=1.2e-12 Score=111.34 Aligned_cols=131 Identities=21% Similarity=0.211 Sum_probs=101.0
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC-c-eEEEecCccccch
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL-K-ATLILSDISKINL 194 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~-~-v~~~~~D~~~~~~ 194 (329)
++.....+...+.+.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.++++++..++ . ++++.+|+....
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 95 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL- 95 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH-
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhc-
Confidence 34444555556678889999999999999999999876 6999999999999999999999998 3 889999877621
Q ss_pred hhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 195 KKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
.....||.|+++.+.. . ...+++.+.++|+|||+++++
T Consensus 96 -----------------~~~~~~D~v~~~~~~~------------------~-------~~~~l~~~~~~l~~gG~l~~~ 133 (192)
T 1l3i_A 96 -----------------CKIPDIDIAVVGGSGG------------------E-------LQEILRIIKDKLKPGGRIIVT 133 (192)
T ss_dssp -----------------TTSCCEEEEEESCCTT------------------C-------HHHHHHHHHHTEEEEEEEEEE
T ss_pred -----------------ccCCCCCEEEECCchH------------------H-------HHHHHHHHHHhcCCCcEEEEE
Confidence 0114799999886531 0 146789999999999999998
Q ss_pred cCCCCccccHHHHHHHHhhC
Q psy15212 275 TCSLWFEESEEQAIIFSKNH 294 (329)
Q Consensus 275 TCS~~~~Ene~vv~~~l~~~ 294 (329)
+++ .++...+..+++++
T Consensus 134 ~~~---~~~~~~~~~~l~~~ 150 (192)
T 1l3i_A 134 AIL---LETKFEAMECLRDL 150 (192)
T ss_dssp ECB---HHHHHHHHHHHHHT
T ss_pred ecC---cchHHHHHHHHHHC
Confidence 875 23334445555554
No 100
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.42 E-value=2.4e-13 Score=114.03 Aligned_cols=110 Identities=13% Similarity=0.192 Sum_probs=84.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRF 211 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
++.+|||+|||+|..+..+++... .|+++|+++.+++.+++|++..++.++++++|+.+.. ... .
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~------------~- 105 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFL-PEA------------K- 105 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHH-HHH------------H-
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHH-Hhh------------h-
Confidence 688999999999999999998644 6999999999999999999998888899999987642 000 0
Q ss_pred cCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHH--HhcCCCCCEEEEEcCCCCc
Q psy15212 212 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL--WKMLKPGGKLLFVTCSLWF 280 (329)
Q Consensus 212 ~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a--~~~LkpgG~lvysTCS~~~ 280 (329)
...++||.|++|+|+. +.. . ++++.. .++|+|||++++++++...
T Consensus 106 ~~~~~~D~i~~~~~~~--~~~------------~----------~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 106 AQGERFTVAFMAPPYA--MDL------------A----------ALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp HTTCCEEEEEECCCTT--SCT------------T----------HHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred ccCCceEEEEECCCCc--hhH------------H----------HHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 0124799999999965 110 0 123333 5899999999998776443
No 101
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.42 E-value=4.2e-12 Score=107.27 Aligned_cols=129 Identities=16% Similarity=0.170 Sum_probs=98.1
Q ss_pred EechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccch
Q psy15212 116 IQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINL 194 (329)
Q Consensus 116 ~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~ 194 (329)
.++.-...+...+.+.++.+|||+|||+|..+..+++ .+.+++++|+++.+++.++++++..|+. ++++.+|+....
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~- 96 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVL- 96 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHG-
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccc-
Confidence 3344445555566778899999999999999999998 4479999999999999999999999985 899999987622
Q ss_pred hhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 195 KKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
..+.||.|+++++ . ....+++.+.++ |||+++++
T Consensus 97 ------------------~~~~~D~i~~~~~-~-------------------------~~~~~l~~~~~~--~gG~l~~~ 130 (183)
T 2yxd_A 97 ------------------DKLEFNKAFIGGT-K-------------------------NIEKIIEILDKK--KINHIVAN 130 (183)
T ss_dssp ------------------GGCCCSEEEECSC-S-------------------------CHHHHHHHHHHT--TCCEEEEE
T ss_pred ------------------cCCCCcEEEECCc-c-------------------------cHHHHHHHHhhC--CCCEEEEE
Confidence 2368999999877 1 023567777777 99999998
Q ss_pred cCCCCccccHHHHHHHHhhCC
Q psy15212 275 TCSLWFEESEEQAIIFSKNHK 295 (329)
Q Consensus 275 TCS~~~~Ene~vv~~~l~~~~ 295 (329)
+++ ++. ...+...++++.
T Consensus 131 ~~~--~~~-~~~~~~~l~~~g 148 (183)
T 2yxd_A 131 TIV--LEN-AAKIINEFESRG 148 (183)
T ss_dssp ESC--HHH-HHHHHHHHHHTT
T ss_pred ecc--ccc-HHHHHHHHHHcC
Confidence 875 233 333455555553
No 102
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.42 E-value=1.1e-12 Score=113.99 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=85.0
Q ss_pred CCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhcccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
++.+|||+|||+|..+..++...+ .+++++|+++.+++.+++++...++. ++++.+|+....
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---------------- 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP---------------- 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC----------------
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC----------------
Confidence 478999999999999999998865 79999999999999999999999986 899999988754
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
..+.||.|+++.- . ....+++.+.++|+|||++++....
T Consensus 129 ---~~~~~D~i~~~~~-------------------~-------~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 129 ---SEPPFDGVISRAF-------------------A-------SLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp ---CCSCEEEEECSCS-------------------S-------SHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred ---ccCCcCEEEEecc-------------------C-------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 2468999996421 0 0246899999999999999987554
No 103
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.42 E-value=1.5e-12 Score=113.26 Aligned_cols=112 Identities=21% Similarity=0.310 Sum_probs=89.7
Q ss_pred hhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhc
Q psy15212 125 APLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDIN 202 (329)
Q Consensus 125 ~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~ 202 (329)
...+.+.++ +|||+|||+|..+..+++..+.+|+++|+++.+++.++++++..++. ++++.+|+...+
T Consensus 37 ~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------- 106 (219)
T 3dlc_A 37 INRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP--------- 106 (219)
T ss_dssp HHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS---------
T ss_pred HHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC---------
Confidence 334455666 99999999999999999884479999999999999999999999874 899999998765
Q ss_pred ccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 203 KKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 203 ~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+.++.||+|++..... .-++ ...+|+.+.++|+|||++++++..
T Consensus 107 ---------~~~~~~D~v~~~~~l~------~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 107 ---------IEDNYADLIVSRGSVF------FWED----------------VATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp ---------SCTTCEEEEEEESCGG------GCSC----------------HHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ---------CCcccccEEEECchHh------hccC----------------HHHHHHHHHHhCCCCCEEEEEecc
Confidence 3457899999765322 1111 345899999999999999998644
No 104
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.41 E-value=4.3e-12 Score=113.02 Aligned_cols=124 Identities=18% Similarity=0.109 Sum_probs=99.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
+.+|++|||+|||+|..++.+++..+ .+|+|+|+++..++.+++|++++|+. ++++.+|+....
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~------------- 85 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF------------- 85 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-------------
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc-------------
Confidence 56789999999999999999998765 68999999999999999999999995 899999988753
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHH
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQ 286 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~v 286 (329)
.....||.|++ .|.|- .+-.+||..+...|+++|+||.+.- .+++.
T Consensus 86 -----~~~~~~D~Ivi----aGmGg--------------------~lI~~IL~~~~~~l~~~~~lIlqp~-----~~~~~ 131 (230)
T 3lec_A 86 -----EEADNIDTITI----CGMGG--------------------RLIADILNNDIDKLQHVKTLVLQPN-----NREDD 131 (230)
T ss_dssp -----CGGGCCCEEEE----EEECH--------------------HHHHHHHHHTGGGGTTCCEEEEEES-----SCHHH
T ss_pred -----ccccccCEEEE----eCCch--------------------HHHHHHHHHHHHHhCcCCEEEEECC-----CChHH
Confidence 12237999875 23332 1345689999999999999998753 35777
Q ss_pred HHHHHhhCCCcEEec
Q psy15212 287 AIIFSKNHKDSIRLN 301 (329)
Q Consensus 287 v~~~l~~~~~~~~~~ 301 (329)
+..+|..+ +|..+.
T Consensus 132 lr~~L~~~-Gf~i~~ 145 (230)
T 3lec_A 132 LRKWLAAN-DFEIVA 145 (230)
T ss_dssp HHHHHHHT-TEEEEE
T ss_pred HHHHHHHC-CCEEEE
Confidence 78888877 666543
No 105
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.41 E-value=9.4e-13 Score=121.82 Aligned_cols=176 Identities=15% Similarity=0.134 Sum_probs=110.0
Q ss_pred ccccceEEEechh-----HHHHhh-hcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcC-
Q psy15212 108 KFFNGFCSIQDAA-----AQLAAP-LLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLN- 179 (329)
Q Consensus 108 ~~~~G~~~~Qd~~-----s~l~~~-~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g- 179 (329)
.+.+|.+...... .+++.. ++...++.+|||+|||+|+.+..+++..+ .+|+++|+|+.+++.+++++...+
T Consensus 53 L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~ 132 (294)
T 3adn_A 53 MALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA 132 (294)
T ss_dssp EEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHS
T ss_pred EEECCeEeeccCchhHHHHHHHHHHHhcCCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccc
Confidence 4567777665443 222211 12223457999999999999999998755 699999999999999999987652
Q ss_pred ----C-ceEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHH
Q psy15212 180 ----L-KATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYS 254 (329)
Q Consensus 180 ----~-~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q 254 (329)
- +++++.+|+..+. . ...++||+|++|+|... | |... -..
T Consensus 133 ~~~~~~rv~~~~~D~~~~l----------------~-~~~~~fDvIi~D~~~p~-~-----~~~~------------l~~ 177 (294)
T 3adn_A 133 GSYDDPRFKLVIDDGVNFV----------------N-QTSQTFDVIISDCTDPI-G-----PGES------------LFT 177 (294)
T ss_dssp SCTTCTTCCEECSCSCC--------------------CCCCCEEEEEECC----------------------------CC
T ss_pred ccccCCceEEEEChHHHHH----------------h-hcCCCccEEEECCCCcc-C-----cchh------------ccH
Confidence 2 3889999998753 1 13468999999987421 1 1000 012
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCC--CccccHHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEE
Q psy15212 255 CKILNNLWKMLKPGGKLLFVTCSL--WFEESEEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 323 (329)
Q Consensus 255 ~~lL~~a~~~LkpgG~lvysTCS~--~~~Ene~vv~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~ 323 (329)
.++++.+.+.|+|||+++..++|. .++.-..+++.+-+.++...........+| .+.-||.+|.
T Consensus 178 ~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p-----~g~~~f~~as 243 (294)
T 3adn_A 178 SAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYY-----GGIMTFAWAT 243 (294)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSS-----SSEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccC-----CCceEEEEEe
Confidence 568899999999999999876542 233334444444445554443322112233 2445776663
No 106
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.41 E-value=1.6e-12 Score=117.63 Aligned_cols=116 Identities=22% Similarity=0.371 Sum_probs=93.5
Q ss_pred HHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhh
Q psy15212 122 QLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYI 199 (329)
Q Consensus 122 ~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~ 199 (329)
..+...+.+.++.+|||+|||+|..+..+++..+.+|+++|+|+.+++.+++++...|+. ++++.+|+...+
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------ 124 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP------ 124 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC------
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC------
Confidence 334445567889999999999999999999877789999999999999999999998875 899999998765
Q ss_pred hhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 200 DINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 200 ~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+.++.||+|++.. ++.+.++ ...+|+++.++|||||++++++..
T Consensus 125 ------------~~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 125 ------------FEDASFDAVWALE------SLHHMPD----------------RGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp ------------SCTTCEEEEEEES------CTTTSSC----------------HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ------------CCCCCccEEEEec------hhhhCCC----------------HHHHHHHHHHHcCCCeEEEEEEee
Confidence 3457899999632 2222221 246899999999999999998754
No 107
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.41 E-value=2.3e-13 Score=120.15 Aligned_cols=105 Identities=21% Similarity=0.257 Sum_probs=83.9
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCC------CEEEEEeCChhHHHHHHHHHHHcC-----Cc-eEEEecCccccchhh
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIAD------IKLISVDNNLSRLNMISENLKRLN-----LK-ATLILSDISKINLKK 196 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~------~~v~avD~~~~rl~~l~~n~~~~g-----~~-v~~~~~D~~~~~~~~ 196 (329)
.++++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.+++++++.+ .. ++++.+|+.......
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 478899999999999999999999864 599999999999999999999988 33 889999987631000
Q ss_pred hhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 197 LYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
....+.||+|++++++.. +++.+.+.|+|||+++.++
T Consensus 157 --------------~~~~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 157 --------------KKELGLFDAIHVGASASE----------------------------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp --------------HHHHCCEEEEEECSBBSS----------------------------CCHHHHHHEEEEEEEEEEE
T ss_pred --------------CccCCCcCEEEECCchHH----------------------------HHHHHHHhcCCCcEEEEEE
Confidence 012357999999987641 2466778899999999874
No 108
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.41 E-value=3.9e-13 Score=124.63 Aligned_cols=128 Identities=19% Similarity=0.128 Sum_probs=95.1
Q ss_pred EEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCcccc
Q psy15212 114 CSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKI 192 (329)
Q Consensus 114 ~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~ 192 (329)
|..+......++..+++.++++|||+|||+|..|..+++. +.+|+|+|+++.+++.++++++..+.. ++++.+|+...
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT 102 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSS
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhC
Confidence 4445556666777788889999999999999999999986 469999999999999999999988875 89999998876
Q ss_pred chhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHH-----------HHHHHHHHH
Q psy15212 193 NLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSK-----------YSCKILNNL 261 (329)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~-----------~q~~lL~~a 261 (329)
+ ...||.|++|+|+..+.- .+..+.. .|. +.+
T Consensus 103 ~--------------------~~~~D~Vv~n~py~~~~~--------------~~~~ll~~~~~~~~~~l~~Q~---e~a 145 (299)
T 2h1r_A 103 V--------------------FPKFDVCTANIPYKISSP--------------LIFKLISHRPLFKCAVLMFQK---EFA 145 (299)
T ss_dssp C--------------------CCCCSEEEEECCGGGHHH--------------HHHHHHHCSSCCSEEEEEEEH---HHH
T ss_pred C--------------------cccCCEEEEcCCcccccH--------------HHHHHHhcCCccceeeehHHH---HHH
Confidence 4 247999999999874321 1111111 011 557
Q ss_pred HhcCCCCCEEEEEcCCCC
Q psy15212 262 WKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 262 ~~~LkpgG~lvysTCS~~ 279 (329)
.++++++|...|+|||..
T Consensus 146 ~rlla~~G~~~y~~ls~~ 163 (299)
T 2h1r_A 146 ERMLANVGDSNYSRLTIN 163 (299)
T ss_dssp HHHTCCTTSTTCCHHHHH
T ss_pred HHHhcCCCCcchhHHHHH
Confidence 788999999899888743
No 109
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.41 E-value=2.7e-12 Score=118.38 Aligned_cols=122 Identities=15% Similarity=0.187 Sum_probs=94.8
Q ss_pred HhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhh
Q psy15212 124 AAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDI 201 (329)
Q Consensus 124 ~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~ 201 (329)
+...+.+++|.+|||+|||+|..+..+++..+.+|+|+|+|+.+++.+++++...|+. ++++.+|+..+
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------- 134 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--------- 134 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---------
T ss_pred HHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---------
Confidence 4455677899999999999999999999986689999999999999999999999986 88999998653
Q ss_pred cccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 202 NKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 202 ~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
++.||+|++. +++.+-|+..-....+ ....+++.+.++|||||+++..+.+..
T Consensus 135 ------------~~~fD~v~~~------~~~~~~~d~~~~~~~~-------~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 135 ------------DEPVDRIVSL------GAFEHFADGAGDAGFE-------RYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ------------CCCCSEEEEE------SCGGGTTCCSSCCCTT-------HHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ------------CCCccEEEEc------chHHhcCccccccchh-------HHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 3689999964 3333333210000001 135689999999999999999887644
No 110
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.40 E-value=2.4e-12 Score=111.18 Aligned_cols=167 Identities=17% Similarity=0.246 Sum_probs=98.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC---CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhh----hhhh
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD---IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKL----YIDI 201 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~---~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~----~~~~ 201 (329)
++++.+|||+|||+|+.+..+++..+ ++|+|+|+++.. ... ++++.+|+.......+ +++.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccc
Confidence 56789999999999999999999874 699999999842 123 7888899876430000 0000
Q ss_pred cc--cccccc-cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 202 NK--KTNNRF-RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 202 ~~--~~~~~~-~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
.. ...... ..+.++.||.|++|+++...|.. ..+.......+..+|+.+.++|||||+++..+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~-----------~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~- 156 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNK-----------IDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL- 156 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC-
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC-
Confidence 00 000000 00234689999999865433320 1223334456778999999999999999976532
Q ss_pred CccccHHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEEEe
Q psy15212 279 WFEESEEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQK 326 (329)
Q Consensus 279 ~~~Ene~vv~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l~k 326 (329)
.++...+...++.+ +..+.. +-|...+....+.|+++.=.|
T Consensus 157 --~~~~~~l~~~l~~~--f~~v~~---~~~~~~r~~s~e~y~v~~~~~ 197 (201)
T 2plw_A 157 --GSQTNNLKTYLKGM--FQLVHT---TKPKASRNESREIYLVCKNFL 197 (201)
T ss_dssp --STTHHHHHHHHHTT--EEEEEE---CCCC-----CCEEEEEEEEEC
T ss_pred --CCCHHHHHHHHHHH--HheEEE---ECCcccCCcCceEEEEEecCc
Confidence 34445555566553 332221 112111124566777775433
No 111
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.39 E-value=1.4e-12 Score=121.66 Aligned_cols=114 Identities=17% Similarity=0.221 Sum_probs=92.1
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccc
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKIN 193 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~ 193 (329)
|......+...+.+++|++|||+|||+|..+..+++..+ ++|+++|+++.+++.++++++..|+. ++++.+|+....
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~ 139 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV 139 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc
Confidence 444455566677889999999999999999999998754 57999999999999999999999986 899999988743
Q ss_pred hhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEE
Q psy15212 194 LKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLF 273 (329)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvy 273 (329)
...+.||+|++++++...+ +.+.+.|||||++++
T Consensus 140 ------------------~~~~~fD~Iv~~~~~~~~~----------------------------~~~~~~LkpgG~lvi 173 (317)
T 1dl5_A 140 ------------------PEFSPYDVIFVTVGVDEVP----------------------------ETWFTQLKEGGRVIV 173 (317)
T ss_dssp ------------------GGGCCEEEEEECSBBSCCC----------------------------HHHHHHEEEEEEEEE
T ss_pred ------------------ccCCCeEEEEEcCCHHHHH----------------------------HHHHHhcCCCcEEEE
Confidence 1236799999998765221 245668999999998
Q ss_pred EcC
Q psy15212 274 VTC 276 (329)
Q Consensus 274 sTC 276 (329)
+..
T Consensus 174 ~~~ 176 (317)
T 1dl5_A 174 PIN 176 (317)
T ss_dssp EBC
T ss_pred EEC
Confidence 843
No 112
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.39 E-value=1.8e-12 Score=115.58 Aligned_cols=133 Identities=16% Similarity=0.097 Sum_probs=95.9
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCcccc
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKI 192 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~ 192 (329)
+.....+...++...++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.+++++++.|+. ++++.+|+...
T Consensus 45 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 124 (239)
T 2hnk_A 45 SPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET 124 (239)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH
Confidence 344455556666667788999999999999999999874 79999999999999999999999985 88999998653
Q ss_pred chhhhhhh--hcccccccccccCC--CCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCC
Q psy15212 193 NLKKLYID--INKKTNNRFRFYKN--KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG 268 (329)
Q Consensus 193 ~~~~~~~~--~~~~~~~~~~~~~~--~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkpg 268 (329)
. +.+... ...+. ..+.. +.||+|++|.... . ...+++.+.++|+||
T Consensus 125 ~-~~~~~~~~~~~~~----~~f~~~~~~fD~I~~~~~~~------------------~-------~~~~l~~~~~~L~pg 174 (239)
T 2hnk_A 125 L-QVLIDSKSAPSWA----SDFAFGPSSIDLFFLDADKE------------------N-------YPNYYPLILKLLKPG 174 (239)
T ss_dssp H-HHHHHCSSCCGGG----TTTCCSTTCEEEEEECSCGG------------------G-------HHHHHHHHHHHEEEE
T ss_pred H-HHHHhhccccccc----ccccCCCCCcCEEEEeCCHH------------------H-------HHHHHHHHHHHcCCC
Confidence 2 000000 00000 00122 6899999985311 1 125688899999999
Q ss_pred CEEEEEcCCCC
Q psy15212 269 GKLLFVTCSLW 279 (329)
Q Consensus 269 G~lvysTCS~~ 279 (329)
|++++.++.+.
T Consensus 175 G~lv~~~~~~~ 185 (239)
T 2hnk_A 175 GLLIADNVLWD 185 (239)
T ss_dssp EEEEEECSSGG
T ss_pred eEEEEEccccC
Confidence 99999886543
No 113
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.39 E-value=1.6e-12 Score=116.32 Aligned_cols=139 Identities=13% Similarity=0.182 Sum_probs=95.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHH------cCCc-eEEEecCccc-cchhhhhhh
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKR------LNLK-ATLILSDISK-INLKKLYID 200 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~------~g~~-v~~~~~D~~~-~~~~~~~~~ 200 (329)
..++.+|||+|||+|..+..+|+..+ ..|+|+|+++.+++.++++++. .+.. ++++.+|+.. ++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~------- 116 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLP------- 116 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHH-------
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhh-------
Confidence 34577999999999999999998876 7999999999999999998865 3554 8999999986 32
Q ss_pred hcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCc
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF 280 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~ 280 (329)
..+..+.||.|++..|.. |........+ -.+..+|+.+.++|||||.|+++|+. +
T Consensus 117 ---------~~~~~~~~D~v~~~~~dp------------~~k~~h~krr--~~~~~~l~~~~~~LkpGG~l~~~td~--~ 171 (235)
T 3ckk_A 117 ---------NFFYKGQLTKMFFLFPDP------------HFKRTKHKWR--IISPTLLAEYAYVLRVGGLVYTITDV--L 171 (235)
T ss_dssp ---------HHCCTTCEEEEEEESCC-------------------------CCCHHHHHHHHHHEEEEEEEEEEESC--H
T ss_pred ---------hhCCCcCeeEEEEeCCCc------------hhhhhhhhhh--hhhHHHHHHHHHHCCCCCEEEEEeCC--H
Confidence 123457899999865522 1110000000 01346899999999999999998763 2
Q ss_pred cccHHHHHHHHhhCCCcEEec
Q psy15212 281 EESEEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 281 ~Ene~vv~~~l~~~~~~~~~~ 301 (329)
. -.+.+...+..++.+..+.
T Consensus 172 ~-~~~~~~~~l~~~~~f~~~~ 191 (235)
T 3ckk_A 172 E-LHDWMCTHFEEHPLFERVP 191 (235)
T ss_dssp H-HHHHHHHHHHTSTTEEEEC
T ss_pred H-HHHHHHHHHHHCCCccccC
Confidence 1 1122333345677776653
No 114
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.39 E-value=4e-12 Score=113.30 Aligned_cols=109 Identities=19% Similarity=0.230 Sum_probs=89.8
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC-c-eEEEecCccccchhhhhhh
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL-K-ATLILSDISKINLKKLYID 200 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~-~-v~~~~~D~~~~~~~~~~~~ 200 (329)
.+...+++.+|++|||+|||+|..+..+++. +.+|+++|+++.+++.++++++..++ . ++++.+|+....
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------- 153 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE------- 153 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-------
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-------
Confidence 4445566788999999999999999999988 67999999999999999999999987 3 888999987632
Q ss_pred hcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
..++.||.|++|+|-. ..+++.+.++|+|||++++.+.+
T Consensus 154 -----------~~~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 154 -----------VPEGIFHAAFVDVREP---------------------------WHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp -----------CCTTCBSEEEECSSCG---------------------------GGGHHHHHHHBCTTCEEEEEESS
T ss_pred -----------cCCCcccEEEECCcCH---------------------------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 1346899999987711 13578889999999999987654
No 115
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.38 E-value=7.3e-12 Score=112.43 Aligned_cols=123 Identities=15% Similarity=0.057 Sum_probs=97.8
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
+.+|++|||+|||+|..++.+++..+ .+|+|+|+++..++.+++|++++|+. ++++.+|+....
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~------------- 85 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI------------- 85 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-------------
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc-------------
Confidence 56789999999999999999998765 68999999999999999999999995 899999987653
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHH
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQ 286 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~v 286 (329)
.....||.|++ .|.|- .+-.+||..+...|+++|+||.+.- .+.+.
T Consensus 86 -----~~~~~~D~Ivi----agmGg--------------------~lI~~IL~~~~~~L~~~~~lIlq~~-----~~~~~ 131 (244)
T 3gnl_A 86 -----EKKDAIDTIVI----AGMGG--------------------TLIRTILEEGAAKLAGVTKLILQPN-----IAAWQ 131 (244)
T ss_dssp -----CGGGCCCEEEE----EEECH--------------------HHHHHHHHHTGGGGTTCCEEEEEES-----SCHHH
T ss_pred -----CccccccEEEE----eCCch--------------------HHHHHHHHHHHHHhCCCCEEEEEcC-----CChHH
Confidence 12236999885 23332 2345789999999999999998743 35677
Q ss_pred HHHHHhhCCCcEEe
Q psy15212 287 AIIFSKNHKDSIRL 300 (329)
Q Consensus 287 v~~~l~~~~~~~~~ 300 (329)
+..+|..+ +|..+
T Consensus 132 lr~~L~~~-Gf~i~ 144 (244)
T 3gnl_A 132 LREWSEQN-NWLIT 144 (244)
T ss_dssp HHHHHHHH-TEEEE
T ss_pred HHHHHHHC-CCEEE
Confidence 77777776 56543
No 116
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.38 E-value=2.7e-12 Score=123.61 Aligned_cols=153 Identities=22% Similarity=0.234 Sum_probs=104.0
Q ss_pred ceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCc
Q psy15212 112 GFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIA--DIKLISVDNNLSRLNMISENLKRLNLKATLILSDI 189 (329)
Q Consensus 112 G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~--~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~ 189 (329)
|.++-.+.-...++.++.+.++.+|||+|||+|+.+..+++.. ...|+|+|+++.+++.+ -.++++++|+
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~~~~~~~~D~ 90 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------PWAEGILADF 90 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------TTEEEEESCG
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------CCCcEEeCCh
Confidence 5555555556666667766667799999999999999999875 27999999999998766 2378899998
Q ss_pred cccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----------HHHHHHHHH
Q psy15212 190 SKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----------SKYSCKILN 259 (329)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----------~~~q~~lL~ 259 (329)
.... ..++||+|++|||+...+...+.. .....+....+ ...+..+++
T Consensus 91 ~~~~-------------------~~~~fD~Ii~NPPy~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 148 (421)
T 2ih2_A 91 LLWE-------------------PGEAFDLILGNPPYGIVGEASKYP---IHVFKAVKDLYKKAFSTWKGKYNLYGAFLE 148 (421)
T ss_dssp GGCC-------------------CSSCEEEEEECCCCCCBSCTTTCS---BCCCHHHHHHHHHHCTTCCTTCCHHHHHHH
T ss_pred hhcC-------------------ccCCCCEEEECcCccCcccccccc---cccCHHHHHHHHHhhhcccCCccHHHHHHH
Confidence 7654 246899999999998665421100 00001111111 124568899
Q ss_pred HHHhcCCCCCEEEEEcCC--CCccccHHHHHHHHhhC
Q psy15212 260 NLWKMLKPGGKLLFVTCS--LWFEESEEQAIIFSKNH 294 (329)
Q Consensus 260 ~a~~~LkpgG~lvysTCS--~~~~Ene~vv~~~l~~~ 294 (329)
++.++|+|||++++.++. +.....+...+.+++..
T Consensus 149 ~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~ 185 (421)
T 2ih2_A 149 KAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREG 185 (421)
T ss_dssp HHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHS
T ss_pred HHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcC
Confidence 999999999999998865 22334455555555543
No 117
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=5.4e-12 Score=107.56 Aligned_cols=150 Identities=16% Similarity=0.130 Sum_probs=106.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
+.++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++. .++++.+|+...+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~----~~~~~~~d~~~~~---------------- 102 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDFP----EARWVVGDLSVDQ---------------- 102 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTSC----------------
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhCC----CCcEEEcccccCC----------------
Confidence 457889999999999999999986 5699999999999999988763 2778889988754
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHHH
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAII 289 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~ 289 (329)
...+.||+|++++++-. ..... ....+|+.+.++|+|||++++++.+... ...+.+..
T Consensus 103 --~~~~~~D~i~~~~~~~~------------~~~~~-------~~~~~l~~~~~~l~~~G~l~~~~~~~~~-~~~~~~~~ 160 (195)
T 3cgg_A 103 --ISETDFDLIVSAGNVMG------------FLAED-------GREPALANIHRALGADGRAVIGFGAGRG-WVFGDFLE 160 (195)
T ss_dssp --CCCCCEEEEEECCCCGG------------GSCHH-------HHHHHHHHHHHHEEEEEEEEEEEETTSS-CCHHHHHH
T ss_pred --CCCCceeEEEECCcHHh------------hcChH-------HHHHHHHHHHHHhCCCCEEEEEeCCCCC-cCHHHHHH
Confidence 23568999998765331 01111 1356899999999999999987654322 34455666
Q ss_pred HHhhCCCcEEecCC--CcccCCCCCCCCCCeEEEEEEEec
Q psy15212 290 FSKNHKDSIRLNSP--GQLLPTVNKKQDYDGFFYSLFQKR 327 (329)
Q Consensus 290 ~l~~~~~~~~~~~~--~~~~p~~~~~~~~~gff~a~l~k~ 327 (329)
.++.. +++.+... ....|. ....++++.+.+|.
T Consensus 161 ~l~~~-Gf~~~~~~~~~~~~~~----~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 161 VAERV-GLELENAFESWDLKPF----VQGSEFLVAVFTKK 195 (195)
T ss_dssp HHHHH-TEEEEEEESSTTCCBC----CTTCSEEEEEEEEC
T ss_pred HHHHc-CCEEeeeecccccCcC----CCCCcEEEEEEecC
Confidence 66655 56655431 122232 34567888888774
No 118
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.38 E-value=2.9e-12 Score=112.28 Aligned_cols=117 Identities=16% Similarity=0.124 Sum_probs=88.6
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCC------ceEEEecCccccchh
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNL------KATLILSDISKINLK 195 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~------~v~~~~~D~~~~~~~ 195 (329)
.+...+...++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++++...++ .++++.+|+....
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-- 97 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD-- 97 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC--
T ss_pred HHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc--
Confidence 334445556788999999999999999998765 6999999999999999999987776 3789999986543
Q ss_pred hhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 196 KLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
...++||+|++... +..- ... ...++|+.+.++|||||.++.+.
T Consensus 98 ----------------~~~~~fD~v~~~~~------l~~~-------~~~-------~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 98 ----------------KRFHGYDAATVIEV------IEHL-------DLS-------RLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ----------------GGGCSCSEEEEESC------GGGC-------CHH-------HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ----------------ccCCCcCEEeeHHH------HHcC-------CHH-------HHHHHHHHHHHHcCCCEEEEEcc
Confidence 13468999996432 2111 111 13568999999999999777665
Q ss_pred CC
Q psy15212 276 CS 277 (329)
Q Consensus 276 CS 277 (329)
+.
T Consensus 142 ~~ 143 (217)
T 3jwh_A 142 NI 143 (217)
T ss_dssp BH
T ss_pred Cc
Confidence 53
No 119
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.38 E-value=5.2e-12 Score=110.68 Aligned_cols=117 Identities=17% Similarity=0.150 Sum_probs=87.8
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCC------ceEEEecCccccchh
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNL------KATLILSDISKINLK 195 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~------~v~~~~~D~~~~~~~ 195 (329)
.+...+...++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++++...++ .++++.+|+....
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-- 97 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD-- 97 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC--
T ss_pred HHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc--
Confidence 334444556788999999999999999998766 6999999999999999999987765 4789999986544
Q ss_pred hhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 196 KLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
...++||+|++.- ++..- ... ...++|+.+.+.|||||.++...
T Consensus 98 ----------------~~~~~fD~V~~~~------~l~~~-------~~~-------~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 98 ----------------KRFSGYDAATVIE------VIEHL-------DEN-------RLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp ----------------GGGTTCSEEEEES------CGGGC-------CHH-------HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ----------------cccCCCCEEEEHH------HHHhC-------CHH-------HHHHHHHHHHHhhCCCEEEEEcc
Confidence 2346899999632 22111 111 13568999999999999776654
Q ss_pred CC
Q psy15212 276 CS 277 (329)
Q Consensus 276 CS 277 (329)
+.
T Consensus 142 ~~ 143 (219)
T 3jwg_A 142 NK 143 (219)
T ss_dssp BG
T ss_pred ch
Confidence 43
No 120
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.38 E-value=4.4e-12 Score=113.97 Aligned_cols=144 Identities=10% Similarity=0.020 Sum_probs=93.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCcccc-chhhhhhhhcccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKI-NLKKLYIDINKKTNN 207 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~-~~~~~~~~~~~~~~~ 207 (329)
++.+|||+|||+|..+..+++..+ .+|+|+|+++.+++.+++|++.+++. ++++.+|+... .
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------------- 130 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLM-------------- 130 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSST--------------
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhh--------------
Confidence 577999999999999999998753 79999999999999999999999985 89999997652 1
Q ss_pred cccccC---CCCCCEEEEccCCccccc-cc----c-----CCCCcccCChhH-H--HHHHHHHHHHHHHHHhcCCCCCEE
Q psy15212 208 RFRFYK---NKYFDRILADLPCTGSGV-VR----R-----NPDIPWLRRKND-I--KKLSKYSCKILNNLWKMLKPGGKL 271 (329)
Q Consensus 208 ~~~~~~---~~~fD~Vl~D~PCsg~G~-~~----~-----~p~~~~~~~~~~-~--~~l~~~q~~lL~~a~~~LkpgG~l 271 (329)
..+. ++.||.|++|||+...+. +. + .|...+.....+ + .........++..+.++++++|.+
T Consensus 131 --~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~ 208 (254)
T 2h00_A 131 --DALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWY 208 (254)
T ss_dssp --TTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCE
T ss_pred --hhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEE
Confidence 0112 258999999999986651 11 0 111111100000 0 011123345677777889999976
Q ss_pred EEEcCCCCccccHHHHHHHHhhC
Q psy15212 272 LFVTCSLWFEESEEQAIIFSKNH 294 (329)
Q Consensus 272 vysTCS~~~~Ene~vv~~~l~~~ 294 (329)
+.. ....++.+.+..++++.
T Consensus 209 ~~~---~~~~~~~~~~~~~l~~~ 228 (254)
T 2h00_A 209 SCM---LGKKCSLAPLKEELRIQ 228 (254)
T ss_dssp EEE---ESSTTSHHHHHHHHHHT
T ss_pred EEC---CCChhHHHHHHHHHHHc
Confidence 532 33445545566666665
No 121
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.38 E-value=1.3e-12 Score=115.42 Aligned_cols=120 Identities=25% Similarity=0.235 Sum_probs=94.7
Q ss_pred cceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCcc
Q psy15212 111 NGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDIS 190 (329)
Q Consensus 111 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~ 190 (329)
.|....+......+...+.+.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.+++++...+ .++++.+|+.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~ 126 (231)
T 1vbf_A 49 PGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGT 126 (231)
T ss_dssp TTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGG
T ss_pred CCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 45555555555566667778899999999999999999999876 699999999999999999998887 7889999987
Q ss_pred ccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCE
Q psy15212 191 KINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGK 270 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~ 270 (329)
... ...+.||+|+++.++... ...+.+.|+|||+
T Consensus 127 ~~~------------------~~~~~fD~v~~~~~~~~~----------------------------~~~~~~~L~pgG~ 160 (231)
T 1vbf_A 127 LGY------------------EEEKPYDRVVVWATAPTL----------------------------LCKPYEQLKEGGI 160 (231)
T ss_dssp GCC------------------GGGCCEEEEEESSBBSSC----------------------------CHHHHHTEEEEEE
T ss_pred ccc------------------ccCCCccEEEECCcHHHH----------------------------HHHHHHHcCCCcE
Confidence 632 123689999988764411 1246778999999
Q ss_pred EEEEcCCC
Q psy15212 271 LLFVTCSL 278 (329)
Q Consensus 271 lvysTCS~ 278 (329)
+++++.+-
T Consensus 161 l~~~~~~~ 168 (231)
T 1vbf_A 161 MILPIGVG 168 (231)
T ss_dssp EEEEECSS
T ss_pred EEEEEcCC
Confidence 99987653
No 122
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.37 E-value=8.2e-12 Score=114.01 Aligned_cols=114 Identities=17% Similarity=0.221 Sum_probs=89.7
Q ss_pred HhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhh
Q psy15212 124 AAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDI 201 (329)
Q Consensus 124 ~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~ 201 (329)
+...+.+.+|.+|||+|||+|..+..+++..+.+|+++|+|+.+++.+++++...|+. ++++.+|+..+
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--------- 126 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF--------- 126 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC---------
T ss_pred HHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC---------
Confidence 3445567889999999999999999999666679999999999999999999988874 88999998643
Q ss_pred cccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 202 NKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 202 ~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
+ +.||+|++. +++.+-+. . ....+|+.+.++|||||+++.++...
T Consensus 127 -----------~-~~fD~v~~~------~~l~~~~~-------~-------~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 127 -----------D-EPVDRIVSI------GAFEHFGH-------E-------RYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp -----------C-CCCSEEEEE------SCGGGTCT-------T-------THHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred -----------C-CCeeEEEEe------CchhhcCh-------H-------HHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 2 689999963 23322211 1 13567999999999999999987553
No 123
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.37 E-value=2.1e-12 Score=118.52 Aligned_cols=108 Identities=17% Similarity=0.197 Sum_probs=89.5
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.+.++.+|||+|||+|..+..+++..+.+|+++|+++.+++.+++++...|+. ++++.+|+..++
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------------- 145 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP------------- 145 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-------------
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-------------
Confidence 67789999999999999999999876679999999999999999999998884 899999998765
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
+.++.||+|++.- ++.+-++ ...+|+++.++|||||++++++.
T Consensus 146 -----~~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 146 -----CEDNSYDFIWSQD------AFLHSPD----------------KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp -----SCTTCEEEEEEES------CGGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----CCCCCEeEEEecc------hhhhcCC----------------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 3457899999632 2222221 24679999999999999999864
No 124
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.37 E-value=2.1e-12 Score=128.96 Aligned_cols=173 Identities=10% Similarity=0.063 Sum_probs=117.8
Q ss_pred cceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-------------------CEEEEEeCChhHHHHH
Q psy15212 111 NGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-------------------IKLISVDNNLSRLNMI 171 (329)
Q Consensus 111 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-------------------~~v~avD~~~~rl~~l 171 (329)
.|.++--+.-+.+++.++.+.++.+|||+|||+|++.+.+++.+. ..++|+|+++.+++.+
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 476776666677778888999999999999999999999887531 3799999999999999
Q ss_pred HHHHHHcCCc------eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChh
Q psy15212 172 SENLKRLNLK------ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKN 245 (329)
Q Consensus 172 ~~n~~~~g~~------v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~ 245 (329)
+.|+...|+. +.+.++|+.... .....+||+|++|||+++........+ +.....
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~-----------------~~~~~~fD~Vv~NPPf~~~~~~~~~~~--~~~~~~ 288 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSD-----------------GENLPKAHIVATNPPFGSAAGTNITRT--FVHPTS 288 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHH-----------------HHTSCCEEEEEECCCCTTCSSCCCCSC--CSSCCS
T ss_pred HHHHHHhCCCccccccCCeEeCCCcccc-----------------cccccCCeEEEECCCcccccchhhHhh--cCCCCC
Confidence 9999988875 678899977543 012368999999999987644321111 111101
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC--CCccccHHHH-HHHHhhCCCc-EEecCCCcccCC
Q psy15212 246 DIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS--LWFEESEEQA-IIFSKNHKDS-IRLNSPGQLLPT 309 (329)
Q Consensus 246 ~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS--~~~~Ene~vv-~~~l~~~~~~-~~~~~~~~~~p~ 309 (329)
..+..++.+++++|+|||++++.+.. +.....+..+ +++++.. .+ .++..|..++++
T Consensus 289 ------~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~~-~l~~ii~Lp~~~F~~ 349 (541)
T 2ar0_A 289 ------NKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKC-HLHTILRLPTGIFYA 349 (541)
T ss_dssp ------CHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHHHHE-EEEEEEECCSSCSSS
T ss_pred ------chHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHHHHHHHhhcC-CEEEEEEcCcCcccC
Confidence 12346899999999999999888643 2222223444 5555543 22 233445445543
No 125
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.37 E-value=1.4e-12 Score=119.69 Aligned_cols=149 Identities=19% Similarity=0.181 Sum_probs=101.0
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHc--CC----------ceEEEecCccccchhhh
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRL--NL----------KATLILSDISKINLKKL 197 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~--g~----------~v~~~~~D~~~~~~~~~ 197 (329)
..+.+|||+|||+|+.+..+++. + .+|+++|+++.+++.+++++ +. ++ .++++.+|+....
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l---- 147 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFI---- 147 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHH----
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHh----
Confidence 45679999999999999999987 6 69999999999999999998 54 32 3889999987642
Q ss_pred hhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 198 YIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
.. .++||+|++|+|+. .|. +. .+ .+.++++.+.+.|+|||.++..+++
T Consensus 148 ------------~~--~~~fD~Ii~d~~~~-~~~----~~-----------~l--~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 148 ------------KN--NRGFDVIIADSTDP-VGP----AK-----------VL--FSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp ------------HH--CCCEEEEEEECCCC-C--------------------T--TSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ------------cc--cCCeeEEEECCCCC-CCc----ch-----------hh--hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 11 46899999999863 111 00 00 1356788999999999999998766
Q ss_pred CC--ccccHHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEE
Q psy15212 278 LW--FEESEEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 323 (329)
Q Consensus 278 ~~--~~Ene~vv~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~ 323 (329)
.. .+....+.+.+-+.++...... ...|.. .+..||++|.
T Consensus 196 ~~~~~~~~~~~~~~l~~~f~~v~~~~---~~vP~~---~g~~~~~~as 237 (281)
T 1mjf_A 196 VYLFTDELISAYKEMKKVFDRVYYYS---FPVIGY---ASPWAFLVGV 237 (281)
T ss_dssp TTTSHHHHHHHHHHHHHHCSEEEEEE---ECCTTS---SSSEEEEEEE
T ss_pred cccCHHHHHHHHHHHHHHCCceEEEE---EecCCC---CceEEEEEee
Confidence 42 2222223333323334333222 234544 4567788775
No 126
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.36 E-value=8.6e-12 Score=107.14 Aligned_cols=127 Identities=23% Similarity=0.290 Sum_probs=85.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC----------CEEEEEeCChhHHHHHHHHHHHcCCc-eEEE-ecCccccchhhh
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD----------IKLISVDNNLSRLNMISENLKRLNLK-ATLI-LSDISKINLKKL 197 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~----------~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~-~~D~~~~~~~~~ 197 (329)
+.+|.+|||+|||+|..+..+++..+ ++|+|+|+++.+ .+. ++++ .+|+........
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHH
Confidence 57899999999999999999999864 699999999843 223 6788 888766431000
Q ss_pred hhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 198 YIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
.. ....++.||+|++|.++...|.. ..+.......+..+++.+.++|||||+++..++.
T Consensus 89 ~~----------~~~~~~~fD~V~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 89 IL----------EVLPGRRADVILSDMAPNATGFR-----------DLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HH----------HHSGGGCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HH----------HhcCCCCCcEEEeCCCCCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 00 00123589999999865544331 1122233445678999999999999999987653
Q ss_pred CCccccHHHHHHH
Q psy15212 278 LWFEESEEQAIIF 290 (329)
Q Consensus 278 ~~~~Ene~vv~~~ 290 (329)
..+.++....+
T Consensus 148 --~~~~~~~~~~l 158 (196)
T 2nyu_A 148 --GSQSRRLQRRL 158 (196)
T ss_dssp --SGGGHHHHHHH
T ss_pred --CccHHHHHHHH
Confidence 33334444433
No 127
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.36 E-value=5.7e-13 Score=118.61 Aligned_cols=115 Identities=17% Similarity=0.120 Sum_probs=87.0
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
+.++.+|||+|||+|..+..+++....+|+++|+|+.+++.++++.+..+..++++.+|+....
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~---------------- 121 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA---------------- 121 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG----------------
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhh----------------
Confidence 5678899999999999999997643369999999999999999999888866899999988762
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
..+.++.||.|++|.- + . .. ..+. ......+++++.++|||||+|++.+++
T Consensus 122 ~~~~~~~fD~V~~d~~-~-~-~~-~~~~-------------~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 122 PTLPDGHFDGILYDTY-P-L-SE-ETWH-------------THQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp GGSCTTCEEEEEECCC-C-C-BG-GGTT-------------THHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred cccCCCceEEEEECCc-c-c-ch-hhhh-------------hhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 1134578999998621 1 0 00 0000 012345789999999999999987554
No 128
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.36 E-value=5.2e-12 Score=108.40 Aligned_cols=113 Identities=17% Similarity=0.183 Sum_probs=89.2
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhh
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDI 201 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~ 201 (329)
.....+...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...++. ++++.+|+...+
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-------- 93 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLT-------- 93 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCC--------
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCC--------
Confidence 3444556667889999999999999999986 569999999999999999999998884 899999988765
Q ss_pred cccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 202 NKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 202 ~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
. .+.||.|++..... .. ..++ ...+++.+.++|+|||++++.+
T Consensus 94 ----------~-~~~~D~v~~~~~l~------~~-------~~~~-------~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 94 ----------F-DRQYDFILSTVVLM------FL-------EAKT-------IPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp ----------C-CCCEEEEEEESCGG------GS-------CGGG-------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred ----------C-CCCceEEEEcchhh------hC-------CHHH-------HHHHHHHHHHhcCCCeEEEEEE
Confidence 2 57899999764321 11 1111 3568999999999999977654
No 129
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.36 E-value=1.3e-12 Score=116.29 Aligned_cols=122 Identities=22% Similarity=0.284 Sum_probs=95.6
Q ss_pred ccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecC
Q psy15212 110 FNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSD 188 (329)
Q Consensus 110 ~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D 188 (329)
..|....+......+...+.+.++++|||+|||+|..+..+++..+.+|+++|+++.+++.++++++..|+. ++++.+|
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 148 (235)
T 1jg1_A 69 PAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGD 148 (235)
T ss_dssp STTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred CCCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECC
Confidence 456666666666666777788899999999999999999999876569999999999999999999999986 8899999
Q ss_pred ccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCC
Q psy15212 189 ISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG 268 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkpg 268 (329)
+.... .....||+|+++.+... +.+.+.+.|+||
T Consensus 149 ~~~~~------------------~~~~~fD~Ii~~~~~~~----------------------------~~~~~~~~L~pg 182 (235)
T 1jg1_A 149 GSKGF------------------PPKAPYDVIIVTAGAPK----------------------------IPEPLIEQLKIG 182 (235)
T ss_dssp GGGCC------------------GGGCCEEEEEECSBBSS----------------------------CCHHHHHTEEEE
T ss_pred cccCC------------------CCCCCccEEEECCcHHH----------------------------HHHHHHHhcCCC
Confidence 73211 12246999998866431 112467789999
Q ss_pred CEEEEEcCC
Q psy15212 269 GKLLFVTCS 277 (329)
Q Consensus 269 G~lvysTCS 277 (329)
|++++++-.
T Consensus 183 G~lvi~~~~ 191 (235)
T 1jg1_A 183 GKLIIPVGS 191 (235)
T ss_dssp EEEEEEECS
T ss_pred cEEEEEEec
Confidence 999988653
No 130
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.36 E-value=1.9e-12 Score=121.48 Aligned_cols=112 Identities=24% Similarity=0.298 Sum_probs=87.1
Q ss_pred HHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcC------------CceEEEe
Q psy15212 121 AQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLN------------LKATLIL 186 (329)
Q Consensus 121 s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g------------~~v~~~~ 186 (329)
...+...+++.+|++|||+|||+|..+..+++..+ ++|+++|+++.+++.+++|+..++ -.++++.
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 44555666889999999999999999999998753 799999999999999999998754 2388999
Q ss_pred cCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCC
Q psy15212 187 SDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLK 266 (329)
Q Consensus 187 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lk 266 (329)
+|+.... ..+..+.||.|++|+|.. | .+++.+.+.|+
T Consensus 174 ~d~~~~~----------------~~~~~~~fD~V~~~~~~~------------~---------------~~l~~~~~~Lk 210 (336)
T 2b25_A 174 KDISGAT----------------EDIKSLTFDAVALDMLNP------------H---------------VTLPVFYPHLK 210 (336)
T ss_dssp SCTTCCC-----------------------EEEEEECSSST------------T---------------TTHHHHGGGEE
T ss_pred CChHHcc----------------cccCCCCeeEEEECCCCH------------H---------------HHHHHHHHhcC
Confidence 9988752 012345799999998733 1 15888999999
Q ss_pred CCCEEEEEc
Q psy15212 267 PGGKLLFVT 275 (329)
Q Consensus 267 pgG~lvysT 275 (329)
|||+|+..+
T Consensus 211 pgG~lv~~~ 219 (336)
T 2b25_A 211 HGGVCAVYV 219 (336)
T ss_dssp EEEEEEEEE
T ss_pred CCcEEEEEe
Confidence 999998543
No 131
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.35 E-value=6.8e-12 Score=110.37 Aligned_cols=110 Identities=19% Similarity=0.345 Sum_probs=87.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC------ceEEEecCccccchhhhhhhhcc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL------KATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~------~v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
+.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...++ .+.++.+|+..++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---------- 96 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS---------- 96 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC----------
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC----------
Confidence 357889999999999999999987 56999999999999999999998887 3688899988765
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+..+.||+|++... +..-++ .. ....+|+.+.++|+|||++++++..
T Consensus 97 --------~~~~~~D~v~~~~~------l~~~~~------~~-------~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 97 --------FHDSSFDFAVMQAF------LTSVPD------PK-------ERSRIIKEVFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp --------SCTTCEEEEEEESC------GGGCCC------HH-------HHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred --------CCCCceeEEEEcch------hhcCCC------HH-------HHHHHHHHHHHHcCCCeEEEEEECC
Confidence 34578999997533 211111 11 1236899999999999999998653
No 132
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.35 E-value=1.1e-11 Score=107.88 Aligned_cols=151 Identities=15% Similarity=0.118 Sum_probs=103.5
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++ .+.++.+|+..++
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~--------------- 98 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL-----GRPVRTMLFHQLD--------------- 98 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCC---------------
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc-----CCceEEeeeccCC---------------
Confidence 3567889999999999999999986 569999999999999999987 3556778877654
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCcc-------
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE------- 281 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~------- 281 (329)
..+.||+|++... +..- ..+ ....+|+.+.++|||||++++++......
T Consensus 99 ----~~~~fD~v~~~~~------l~~~-------~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 154 (211)
T 3e23_A 99 ----AIDAYDAVWAHAC------LLHV-------PRD-------ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLAR 154 (211)
T ss_dssp ----CCSCEEEEEECSC------GGGS-------CHH-------HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSC
T ss_pred ----CCCcEEEEEecCc------hhhc-------CHH-------HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccch
Confidence 3578999997532 1111 111 23568999999999999999987654322
Q ss_pred ----ccHHHHHHHHhhCCC-cEEecCCCcccCCCCCCCCCCeEEEEEEEecC
Q psy15212 282 ----ESEEQAIIFSKNHKD-SIRLNSPGQLLPTVNKKQDYDGFFYSLFQKRK 328 (329)
Q Consensus 282 ----Ene~vv~~~l~~~~~-~~~~~~~~~~~p~~~~~~~~~gff~a~l~k~~ 328 (329)
-+.+.+..++++. + |+.+......-.+. .+....+++.+++.+
T Consensus 155 ~~~~~~~~~~~~~l~~a-G~f~~~~~~~~~~~~~---~~~~~~wl~~~~~~~ 202 (211)
T 3e23_A 155 YYNYPSEEWLRARYAEA-GTWASVAVESSEGKGF---DQELAQFLHVSVRKP 202 (211)
T ss_dssp EECCCCHHHHHHHHHHH-CCCSEEEEEEEEEECT---TSCEEEEEEEEEECC
T ss_pred hccCCCHHHHHHHHHhC-CCcEEEEEEeccCCCC---CCCCceEEEEEEecC
Confidence 2566777777775 4 65543211001111 233455666666653
No 133
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=2.6e-12 Score=112.31 Aligned_cols=120 Identities=23% Similarity=0.235 Sum_probs=93.2
Q ss_pred ceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecC
Q psy15212 112 GFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK-ATLILSD 188 (329)
Q Consensus 112 G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D 188 (329)
|....+......+...+.+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...++. +++..+|
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 136 (215)
T 2yxe_A 57 GQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD 136 (215)
T ss_dssp TEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC
T ss_pred CcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 44444444444555666788999999999999999999999874 79999999999999999999998886 8899999
Q ss_pred ccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCC
Q psy15212 189 ISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG 268 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkpg 268 (329)
+.... ...+.||+|+++.+.... .+.+.++||||
T Consensus 137 ~~~~~------------------~~~~~fD~v~~~~~~~~~----------------------------~~~~~~~L~pg 170 (215)
T 2yxe_A 137 GTLGY------------------EPLAPYDRIYTTAAGPKI----------------------------PEPLIRQLKDG 170 (215)
T ss_dssp GGGCC------------------GGGCCEEEEEESSBBSSC----------------------------CHHHHHTEEEE
T ss_pred cccCC------------------CCCCCeeEEEECCchHHH----------------------------HHHHHHHcCCC
Confidence 85432 124679999987664310 13667889999
Q ss_pred CEEEEEcCC
Q psy15212 269 GKLLFVTCS 277 (329)
Q Consensus 269 G~lvysTCS 277 (329)
|+++.++.+
T Consensus 171 G~lv~~~~~ 179 (215)
T 2yxe_A 171 GKLLMPVGR 179 (215)
T ss_dssp EEEEEEESS
T ss_pred cEEEEEECC
Confidence 999988654
No 134
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.35 E-value=4.8e-12 Score=109.36 Aligned_cols=106 Identities=17% Similarity=0.311 Sum_probs=85.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
..++ +|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...+..+.++.+|+...+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---------------- 89 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD---------------- 89 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS----------------
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC----------------
Confidence 4567 9999999999999999875 569999999999999999999988888899999988764
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+..+.||+|++... . + ... ....+|+.+.++|+|||++++++.+
T Consensus 90 --~~~~~fD~v~~~~~-----~--------~--~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 90 --IVADAWEGIVSIFC-----H--------L--PSS-------LRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp --CCTTTCSEEEEECC-----C--------C--CHH-------HHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred --CCcCCccEEEEEhh-----c--------C--CHH-------HHHHHHHHHHHhcCCCcEEEEEEec
Confidence 24578999996311 0 0 111 2456899999999999999998754
No 135
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.35 E-value=2.2e-12 Score=114.09 Aligned_cols=110 Identities=16% Similarity=0.193 Sum_probs=88.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
..++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++++...+ .++++.+|+...+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~--------------- 105 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKYD--------------- 105 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTCC---------------
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhccC---------------
Confidence 56788999999999999999999874 799999999999999999987766 7899999998865
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
.. +.||+|++..... .- ... ...++|+++.++|||||++++++....
T Consensus 106 ---~~-~~fD~v~~~~~l~------~~-------~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 106 ---FE-EKYDMVVSALSIH------HL-------EDE-------DKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp ---CC-SCEEEEEEESCGG------GS-------CHH-------HHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred ---CC-CCceEEEEeCccc------cC-------CHH-------HHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 22 7899999764321 11 111 124589999999999999999876543
No 136
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.35 E-value=6.4e-12 Score=122.23 Aligned_cols=88 Identities=20% Similarity=0.240 Sum_probs=73.0
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhcccc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKT 205 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~ 205 (329)
.+.+.++++|||+|||+|..+..+|+. ..+|+|+|+|+.+++.+++|++.+|+. ++++.+|+.... ..
T Consensus 281 ~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l-~~--------- 349 (433)
T 1uwv_A 281 WLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDV-TK--------- 349 (433)
T ss_dssp HHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCC-SS---------
T ss_pred hhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHh-hh---------
Confidence 445678899999999999999999986 569999999999999999999999986 899999998732 00
Q ss_pred cccccccCCCCCCEEEEccCCccc
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGS 229 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~ 229 (329)
+. +..+.||+|++|||+.|.
T Consensus 350 ---~~-~~~~~fD~Vv~dPPr~g~ 369 (433)
T 1uwv_A 350 ---QP-WAKNGFDKVLLDPARAGA 369 (433)
T ss_dssp ---SG-GGTTCCSEEEECCCTTCC
T ss_pred ---hh-hhcCCCCEEEECCCCccH
Confidence 00 134579999999998854
No 137
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.34 E-value=4.9e-12 Score=110.98 Aligned_cols=108 Identities=19% Similarity=0.265 Sum_probs=87.3
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
.++.+|||+|||+|..+..+++... +++++|+++.+++.++++++..+..++++.+|+...+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~----------------- 98 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS----------------- 98 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-----------------
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC-----------------
Confidence 4578999999999999999998755 9999999999999999999988866899999988754
Q ss_pred ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
...+.||.|++.++..- .... ...++|+.+.++|+|||++++.++.
T Consensus 99 -~~~~~~D~v~~~~~~~~-------------~~~~-------~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 99 -FEDKTFDYVIFIDSIVH-------------FEPL-------ELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp -SCTTCEEEEEEESCGGG-------------CCHH-------HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -CCCCcEEEEEEcCchHh-------------CCHH-------HHHHHHHHHHHHcCCCcEEEEEecC
Confidence 24568999998866110 0111 1356899999999999999988764
No 138
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.34 E-value=5.1e-12 Score=113.42 Aligned_cols=116 Identities=22% Similarity=0.228 Sum_probs=90.2
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhc
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDIN 202 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~ 202 (329)
.+...+.+.++.+|||+|||+|..+..+++..+.+|+++|+|+.+++.++++.... -.++++.+|+...+
T Consensus 46 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~--------- 115 (266)
T 3ujc_A 46 KILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKE--------- 115 (266)
T ss_dssp HHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCC---------
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCC---------
Confidence 33445567889999999999999999999876679999999999999999887665 34889999998765
Q ss_pred ccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 203 KKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 203 ~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+.++.||+|++... +.+- .. .....+|+.+.++|||||++++++..
T Consensus 116 ---------~~~~~fD~v~~~~~------l~~~-------~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 116 ---------FPENNFDLIYSRDA------ILAL-------SL-------ENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp ---------CCTTCEEEEEEESC------GGGS-------CH-------HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---------CCCCcEEEEeHHHH------HHhc-------Ch-------HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 34678999996432 1111 11 12456899999999999999998743
No 139
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.34 E-value=4.7e-12 Score=117.54 Aligned_cols=116 Identities=15% Similarity=0.228 Sum_probs=91.7
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhh
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYID 200 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~ 200 (329)
.+...+.+.+|.+|||+|||+|..+..+++..+.+|+++|+|+.+++.+++++...|+. ++++.+|+..++
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------- 153 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA------- 153 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-------
T ss_pred HHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-------
Confidence 33445567889999999999999999999876679999999999999999999998875 889999976542
Q ss_pred hcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
+.||+|++.. ++.+-+. . ....+|+.+.++|||||++++++....
T Consensus 154 --------------~~fD~v~~~~------~l~~~~~-------~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 154 --------------EPVDRIVSIE------AFEHFGH-------E-------NYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp --------------CCCSEEEEES------CGGGTCG-------G-------GHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred --------------CCcCEEEEeC------hHHhcCH-------H-------HHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 6799999643 2221111 1 135689999999999999999886644
No 140
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.34 E-value=5e-12 Score=112.18 Aligned_cols=107 Identities=20% Similarity=0.217 Sum_probs=83.8
Q ss_pred cCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccc
Q psy15212 128 LDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 128 l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
+.+.++.+|||+|||+|..+.++++..+ ++|+|+|+++.+++.++++++.. -.+.++.+|+..... +
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~---~-------- 137 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQE---Y-------- 137 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGG---G--------
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCccc---c--------
Confidence 3467889999999999999999999876 79999999999999999998765 348888999887320 0
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
.. .. ..||+|+.|+|.. . ....+++.+.++|||||+++.+
T Consensus 138 --~~-~~-~~~D~v~~~~~~~-----------------~-------~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 138 --AN-IV-EKVDVIYEDVAQP-----------------N-------QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp --TT-TS-CCEEEEEECCCST-----------------T-------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred --cc-cC-ccEEEEEEecCCh-----------------h-------HHHHHHHHHHHhCCCCcEEEEE
Confidence 00 12 6799999876521 0 1234689999999999999986
No 141
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.33 E-value=6.7e-12 Score=111.42 Aligned_cols=108 Identities=20% Similarity=0.270 Sum_probs=84.4
Q ss_pred cCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccc
Q psy15212 128 LDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKT 205 (329)
Q Consensus 128 l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~ 205 (329)
+.+.++++|||+|||+|..+.++++..+ ++|+|+|+++.+++.+.++.++. -.++++.+|+.....
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~----------- 140 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHK----------- 140 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGG-----------
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhh-----------
Confidence 4577899999999999999999999853 79999999999998888888775 348899999887420
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
+. ...+.||+|++|+| . |+ ....++.++.++|||||+++.+.
T Consensus 141 ---~~-~~~~~~D~V~~~~~-~--------~~---------------~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 141 ---YR-MLIAMVDVIFADVA-Q--------PD---------------QTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp ---GG-GGCCCEEEEEECCC-C--------TT---------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---hc-ccCCcEEEEEEcCC-C--------cc---------------HHHHHHHHHHHHcCCCeEEEEEE
Confidence 00 12468999999987 1 11 12346788999999999999853
No 142
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.33 E-value=1.1e-11 Score=103.71 Aligned_cols=129 Identities=18% Similarity=0.208 Sum_probs=88.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhC-C-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchh-hhhhhhccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIA-D-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLK-KLYIDINKKTN 206 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~-~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~-~~~~~~~~~~~ 206 (329)
+.++.+|||+|||+|..+..+++.. + .+++++|+++ +++. -.++++.+|+...+.. .+.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~~~-------- 81 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKALL-------- 81 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHHHH--------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------CcEEEEEcccccchhhhhhh--------
Confidence 6788999999999999999999885 3 7999999999 6532 2378888998765300 000
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHH
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQ 286 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~v 286 (329)
....++.||.|++|+|+...+.. ..+.......+..+++.+.++|+|||.++.++.. .++...
T Consensus 82 ---~~~~~~~~D~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~ 144 (180)
T 1ej0_A 82 ---ERVGDSKVQVVMSDMAPNMSGTP-----------AVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ---GEGFDE 144 (180)
T ss_dssp ---HHHTTCCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES---STTHHH
T ss_pred ---ccCCCCceeEEEECCCccccCCC-----------ccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec---CCcHHH
Confidence 00234689999999998755431 1122233445578999999999999999986543 233344
Q ss_pred HHHHHhh
Q psy15212 287 AIIFSKN 293 (329)
Q Consensus 287 v~~~l~~ 293 (329)
+...++.
T Consensus 145 ~~~~~~~ 151 (180)
T 1ej0_A 145 YLREIRS 151 (180)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
No 143
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.33 E-value=4.4e-12 Score=116.12 Aligned_cols=119 Identities=17% Similarity=0.217 Sum_probs=95.1
Q ss_pred chhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchh
Q psy15212 118 DAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLK 195 (329)
Q Consensus 118 d~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~ 195 (329)
+..+.+...+....++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+++++...+.+++++.+|+...+
T Consensus 8 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-- 85 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-- 85 (284)
T ss_dssp HHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC--
T ss_pred HHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC--
Confidence 33444555556677889999999999999999998865 69999999999999999999988878899999998765
Q ss_pred hhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 196 KLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
+ +++||+|++... +..-++ ..++|+.+.+.|||||+++..+
T Consensus 86 ----------------~-~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 86 ----------------L-NDKYDIAICHAF------LLHMTT----------------PETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp ----------------C-SSCEEEEEEESC------GGGCSS----------------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred ----------------c-CCCeeEEEECCh------hhcCCC----------------HHHHHHHHHHHcCCCCEEEEEe
Confidence 2 468999997543 211111 2368999999999999999877
Q ss_pred CC
Q psy15212 276 CS 277 (329)
Q Consensus 276 CS 277 (329)
..
T Consensus 127 ~~ 128 (284)
T 3gu3_A 127 PH 128 (284)
T ss_dssp CC
T ss_pred cc
Confidence 65
No 144
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.33 E-value=7.1e-12 Score=121.64 Aligned_cols=79 Identities=23% Similarity=0.291 Sum_probs=69.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
+.++++|||+|||+|..+..+|+. +.+|+|+|+++.+++.+++|++.+|+.++++.+|+.+..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~---------------- 350 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVS---------------- 350 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCC----------------
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcC----------------
Confidence 567889999999999999999986 459999999999999999999999888889999988754
Q ss_pred cccCCCCCCEEEEccCCccc
Q psy15212 210 RFYKNKYFDRILADLPCTGS 229 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~ 229 (329)
. ..||.|++|||+.|.
T Consensus 351 ---~-~~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 351 ---V-KGFDTVIVDPPRAGL 366 (425)
T ss_dssp ---C-TTCSEEEECCCTTCS
T ss_pred ---c-cCCCEEEEcCCccch
Confidence 2 279999999997643
No 145
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.33 E-value=1.2e-11 Score=104.87 Aligned_cols=136 Identities=13% Similarity=0.062 Sum_probs=92.3
Q ss_pred chhHHHHhhhcCC--CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchh
Q psy15212 118 DAAAQLAAPLLDI--RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLK 195 (329)
Q Consensus 118 d~~s~l~~~~l~~--~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~ 195 (329)
.+.+.+....+.. .++.+|||+|||+|..+..+++.. +|+|+|+|+.+++. .-.++++.+|+....
T Consensus 7 ~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~--------~~~~~~~~~d~~~~~-- 74 (170)
T 3q87_B 7 GEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES--------HRGGNLVRADLLCSI-- 74 (170)
T ss_dssp CHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT--------CSSSCEEECSTTTTB--
T ss_pred CccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc--------ccCCeEEECChhhhc--
Confidence 3444445555654 678899999999999999999865 99999999999987 223788999987632
Q ss_pred hhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 196 KLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
.++.||.|+++||+....-... |.-... ..++++.+.+.+ |||++++++
T Consensus 75 -----------------~~~~fD~i~~n~~~~~~~~~~~-----~~~~~~--------~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 75 -----------------NQESVDVVVFNPPYVPDTDDPI-----IGGGYL--------GREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp -----------------CGGGCSEEEECCCCBTTCCCTT-----TBCCGG--------GCHHHHHHHHHC-CSSEEEEEE
T ss_pred -----------------ccCCCCEEEECCCCccCCcccc-----ccCCcc--------hHHHHHHHHhhC-CCCEEEEEE
Confidence 3368999999999763221100 111111 123566666666 999999876
Q ss_pred CCCCccccHHHHHHHHhhCCCcEEe
Q psy15212 276 CSLWFEESEEQAIIFSKNHKDSIRL 300 (329)
Q Consensus 276 CS~~~~Ene~vv~~~l~~~~~~~~~ 300 (329)
.+. .+.+.+..++++. +++..
T Consensus 124 ~~~---~~~~~l~~~l~~~-gf~~~ 144 (170)
T 3q87_B 124 IEA---NRPKEVLARLEER-GYGTR 144 (170)
T ss_dssp EGG---GCHHHHHHHHHHT-TCEEE
T ss_pred ecC---CCHHHHHHHHHHC-CCcEE
Confidence 543 4455566667665 55544
No 146
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.33 E-value=4e-12 Score=110.26 Aligned_cols=112 Identities=16% Similarity=0.156 Sum_probs=86.8
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
...++.+|||+|||+|..+..++...+.+|+++|+|+.+++.+++++...+..++++.+|+...+
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--------------- 84 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP--------------- 84 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC---------------
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC---------------
Confidence 35568899999999999866555555579999999999999999999888767889999988764
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
+.++.||.|++..... + ... ....++++.+.+.|||||++++++.+.
T Consensus 85 ---~~~~~fD~v~~~~~l~------~-------~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 85 ---FKDESMSFVYSYGTIF------H-------MRK-------NDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp ---SCTTCEEEEEECSCGG------G-------SCH-------HHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred ---CCCCceeEEEEcChHH------h-------CCH-------HHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 2457899999642211 1 111 124568999999999999999988764
No 147
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.33 E-value=5.6e-12 Score=111.25 Aligned_cols=106 Identities=22% Similarity=0.209 Sum_probs=83.7
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
+.+|++|||+|||+|..+..+++..+ ++|+++|+++.+++.+++++++. -.++++.+|+.....
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~------------- 136 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEE------------- 136 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGG-------------
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcch-------------
Confidence 67899999999999999999998753 79999999999999999998765 348899999886420
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
.....+.||+|++|+|. ++ ....++..+.++|||||+++++.
T Consensus 137 --~~~~~~~~D~v~~~~~~---------~~---------------~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 137 --YRALVPKVDVIFEDVAQ---------PT---------------QAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp --GTTTCCCEEEEEECCCS---------TT---------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --hhcccCCceEEEECCCC---------Hh---------------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 00113579999999871 11 12335889999999999999874
No 148
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.33 E-value=3.2e-12 Score=111.51 Aligned_cols=112 Identities=8% Similarity=0.046 Sum_probs=83.5
Q ss_pred cCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHH-------------cCCceEEEecCccccch
Q psy15212 128 LDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKR-------------LNLKATLILSDISKINL 194 (329)
Q Consensus 128 l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~-------------~g~~v~~~~~D~~~~~~ 194 (329)
+.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.++++... ....++++++|+..++
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~- 95 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT- 95 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST-
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC-
Confidence 34567899999999999999999987 56999999999999999987653 1234889999998865
Q ss_pred hhhhhhhcccccccccccCC-CCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEE
Q psy15212 195 KKLYIDINKKTNNRFRFYKN-KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLF 273 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~-~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvy 273 (329)
..+ ++||.|++-. ++... .. .....+++++.++|||||++++
T Consensus 96 -----------------~~~~~~fD~v~~~~------~l~~l-------~~-------~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 96 -----------------ARDIGHCAAFYDRA------AMIAL-------PA-------DMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp -----------------HHHHHSEEEEEEES------CGGGS-------CH-------HHHHHHHHHHHHHSCSEEEEEE
T ss_pred -----------------cccCCCEEEEEECc------chhhC-------CH-------HHHHHHHHHHHHHcCCCcEEEE
Confidence 122 5799998532 22111 11 1234578999999999999777
Q ss_pred EcCCC
Q psy15212 274 VTCSL 278 (329)
Q Consensus 274 sTCS~ 278 (329)
.++..
T Consensus 139 ~~~~~ 143 (203)
T 1pjz_A 139 ITLEY 143 (203)
T ss_dssp EEESS
T ss_pred EEEec
Confidence 66554
No 149
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.32 E-value=8.6e-12 Score=113.92 Aligned_cols=109 Identities=23% Similarity=0.251 Sum_probs=87.9
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.+...++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.+++++...++.++++.+|+....
T Consensus 115 ~~~~~~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------- 180 (286)
T 3m70_A 115 AAKIISPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAAN------------- 180 (286)
T ss_dssp HHHHSCSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCC-------------
T ss_pred HhhccCCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEecccccc-------------
Confidence 333457889999999999999999987 569999999999999999999999988999999988765
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
..+.||+|++..+.... .... ...+|+.+.++|+|||++++.+
T Consensus 181 ------~~~~fD~i~~~~~~~~~-------------~~~~-------~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 181 ------IQENYDFIVSTVVFMFL-------------NRER-------VPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp ------CCSCEEEEEECSSGGGS-------------CGGG-------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred ------ccCCccEEEEccchhhC-------------CHHH-------HHHHHHHHHHhcCCCcEEEEEE
Confidence 25789999987643210 1111 3468999999999999977653
No 150
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.32 E-value=7.2e-12 Score=120.00 Aligned_cols=112 Identities=13% Similarity=0.087 Sum_probs=85.9
Q ss_pred hhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHH-------HHcCC---ceEEEecCccccc
Q psy15212 125 APLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENL-------KRLNL---KATLILSDISKIN 193 (329)
Q Consensus 125 ~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~-------~~~g~---~v~~~~~D~~~~~ 193 (329)
...+.+.+|++|||+|||+|..++.+|...+ .+|+|+|+++.+++.++++. +.+|+ .++++++|+.+++
T Consensus 166 l~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp 245 (438)
T 3uwp_A 166 IDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE 245 (438)
T ss_dssp HHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHH
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCc
Confidence 3455789999999999999999999998777 47999999999999998865 34565 3899999998865
Q ss_pred hhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEE
Q psy15212 194 LKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLF 273 (329)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvy 273 (329)
... .-..||+|+++++|.. + + ..+.|.+.++.|||||+||.
T Consensus 246 ~~d----------------~~~~aDVVf~Nn~~F~---------------p-d-------l~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 246 WRE----------------RIANTSVIFVNNFAFG---------------P-E-------VDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp HHH----------------HHHTCSEEEECCTTCC---------------H-H-------HHHHHHHHHTTSCTTCEEEE
T ss_pred ccc----------------ccCCccEEEEcccccC---------------c-h-------HHHHHHHHHHcCCCCcEEEE
Confidence 110 0036999999887641 1 1 12346677899999999986
Q ss_pred Ec
Q psy15212 274 VT 275 (329)
Q Consensus 274 sT 275 (329)
+.
T Consensus 287 sE 288 (438)
T 3uwp_A 287 SK 288 (438)
T ss_dssp SS
T ss_pred ee
Confidence 53
No 151
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.32 E-value=1.4e-11 Score=107.83 Aligned_cols=108 Identities=16% Similarity=0.161 Sum_probs=83.6
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.+.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++. ..++++.+|+..++
T Consensus 42 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~--------------- 102 (220)
T 3hnr_A 42 VNKSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFE--------------- 102 (220)
T ss_dssp HHTCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCC---------------
T ss_pred hccCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcC---------------
Confidence 3457889999999999999999986 5699999999999999998865 23788899998865
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
.. +.||.|++... +..-+ .. .+..+|+.+.+.|||||.+++++....
T Consensus 103 ---~~-~~fD~v~~~~~------l~~~~-------~~-------~~~~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 103 ---VP-TSIDTIVSTYA------FHHLT-------DD-------EKNVAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp ---CC-SCCSEEEEESC------GGGSC-------HH-------HHHHHHHHHHHHSCTTCEEEEEEECBS
T ss_pred ---CC-CCeEEEEECcc------hhcCC-------hH-------HHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 23 78999997532 21111 11 124589999999999999999875443
No 152
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.31 E-value=1.2e-11 Score=114.25 Aligned_cols=111 Identities=20% Similarity=0.269 Sum_probs=88.1
Q ss_pred CCCCCCeEEeecCCCchHHHHHH-HhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLL-EIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la-~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
.+.++.+|||+|||+|..+..++ ...+ .+|+++|+++.+++.+++++...|+. ++++.+|+...+
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------- 183 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD----------- 183 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC-----------
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC-----------
Confidence 35788999999999999999986 3333 79999999999999999999999886 899999998865
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+. +.||.|+++.+.. ..|+ . ....++++.+.+.|||||++++++.+
T Consensus 184 -------~~-~~fD~v~~~~~~~------~~~~------~-------~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 184 -------TR-EGYDLLTSNGLNI------YEPD------D-------ARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp -------CC-SCEEEEECCSSGG------GCCC------H-------HHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred -------cc-CCeEEEEECChhh------hcCC------H-------HHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 23 7899999754322 1111 1 12345899999999999999998743
No 153
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.31 E-value=1.1e-11 Score=107.62 Aligned_cols=122 Identities=16% Similarity=0.210 Sum_probs=90.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
+.++.+|||+|||+|..+..+++....+|+++|+++.+++.++++.... -.++++.+|+..++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~i~~~~~d~~~~~---------------- 102 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-PQLRWETMDVRKLD---------------- 102 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-TTCEEEECCTTSCC----------------
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC-CCcEEEEcchhcCC----------------
Confidence 3678899999999999999999864358999999999999999988642 24788999988754
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+.++.||+|+++.+....- ..+ ...|....+. .....++|+.+.++|||||++++.+.+
T Consensus 103 --~~~~~fD~v~~~~~~~~~~--~~~-~~~~~~~~~~----~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 103 --FPSASFDVVLEKGTLDALL--AGE-RDPWTVSSEG----VHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp --SCSSCEEEEEEESHHHHHT--TTC-SCTTSCCHHH----HHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred --CCCCcccEEEECcchhhhc--ccc-ccccccccch----hHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 2457899999877643211 011 1233333222 233467899999999999999998765
No 154
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.31 E-value=1.6e-11 Score=111.36 Aligned_cols=112 Identities=22% Similarity=0.319 Sum_probs=90.3
Q ss_pred HhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhh
Q psy15212 124 AAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDI 201 (329)
Q Consensus 124 ~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~ 201 (329)
........++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...++. ++++.+|+...+
T Consensus 29 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-------- 100 (276)
T 3mgg_A 29 LHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP-------- 100 (276)
T ss_dssp HHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC--------
T ss_pred HhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC--------
Confidence 33344467899999999999999999999874 79999999999999999999999986 899999988765
Q ss_pred cccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 202 NKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 202 ~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
+.++.||+|++... +..-++ ...+|+.+.++|||||++++.+
T Consensus 101 ----------~~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 101 ----------FEDSSFDHIFVCFV------LEHLQS----------------PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp ----------SCTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----------CCCCCeeEEEEech------hhhcCC----------------HHHHHHHHHHHcCCCcEEEEEE
Confidence 34578999997542 211111 1357889999999999999875
No 155
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.31 E-value=8.8e-12 Score=114.12 Aligned_cols=111 Identities=18% Similarity=0.129 Sum_probs=85.2
Q ss_pred CCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHc--CC---ceEEEecCccccchhhhhhhhcccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRL--NL---KATLILSDISKINLKKLYIDINKKT 205 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~--g~---~v~~~~~D~~~~~~~~~~~~~~~~~ 205 (329)
.+.+|||+|||+|+.+..+++..+ .+|+++|+++..++.+++++... ++ +++++.+|+....
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l------------ 142 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHI------------ 142 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHH------------
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHH------------
Confidence 457999999999999999998755 79999999999999999998653 33 3899999988642
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
. ...++||+|++|+|.. .+. +...+ ..++++.+.+.|+|||.++..+.+
T Consensus 143 ----~-~~~~~fD~Ii~d~~~~-~~~----~~~l~-------------~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 143 ----A-KSENQYDVIMVDSTEP-VGP----AVNLF-------------TKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ----H-TCCSCEEEEEESCSSC-CSC----CCCCS-------------TTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ----h-hCCCCeeEEEECCCCC-CCc----chhhh-------------HHHHHHHHHHhcCCCcEEEEEcCC
Confidence 1 1246899999999853 111 11111 135788889999999999998765
No 156
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.30 E-value=6.8e-12 Score=117.41 Aligned_cols=133 Identities=17% Similarity=0.206 Sum_probs=93.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHc--CC---ceEEEecCccccchhhhhhhhccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRL--NL---KATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~--g~---~v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
.++.+|||+|||+|+.+..+++..+ .+|+++|+|+.+++.+++++... ++ .++++.+|+....
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l----------- 183 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFL----------- 183 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHH-----------
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHH-----------
Confidence 3467999999999999999998755 79999999999999999998762 23 3899999987642
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC--Cccc
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL--WFEE 282 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~--~~~E 282 (329)
. ...++||+|++|++.. .| |. ... .+.++++.+.+.|+|||.+++.+.+. ..++
T Consensus 184 -----~-~~~~~fDvIi~d~~~p-~~-----~~-------~~l-----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~ 239 (321)
T 2pt6_A 184 -----E-NVTNTYDVIIVDSSDP-IG-----PA-------ETL-----FNQNFYEKIYNALKPNGYCVAQCESLWIHVGT 239 (321)
T ss_dssp -----H-HCCSCEEEEEEECCCS-SS-----GG-------GGG-----SSHHHHHHHHHHEEEEEEEEEEECCTTTCHHH
T ss_pred -----h-hcCCCceEEEECCcCC-CC-----cc-------hhh-----hHHHHHHHHHHhcCCCcEEEEEcCCcccCHHH
Confidence 1 1246899999998632 11 10 000 02568899999999999999976543 3333
Q ss_pred cHHHHHHHHhhCCCcE
Q psy15212 283 SEEQAIIFSKNHKDSI 298 (329)
Q Consensus 283 ne~vv~~~l~~~~~~~ 298 (329)
-..+++.+-+.++...
T Consensus 240 ~~~~~~~l~~~F~~v~ 255 (321)
T 2pt6_A 240 IKNMIGYAKKLFKKVE 255 (321)
T ss_dssp HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHCCCeE
Confidence 4444444444444443
No 157
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.30 E-value=3.4e-12 Score=118.62 Aligned_cols=126 Identities=16% Similarity=0.112 Sum_probs=81.8
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeC----ChhHHHHHHHHHHHcCCc-eEEEec-Cccccchhhhhhhhcc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDN----NLSRLNMISENLKRLNLK-ATLILS-DISKINLKKLYIDINK 203 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~----~~~rl~~l~~n~~~~g~~-v~~~~~-D~~~~~~~~~~~~~~~ 203 (329)
+++|.+|||+|||||++|..++++ ++|+|+|+ ++.+++.+ ..+..+.+ +.++.+ |+..++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~---------- 145 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP---------- 145 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC----------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC----------
Confidence 467899999999999999999987 48999999 55443211 11222334 778887 877643
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCcccc
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEES 283 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~En 283 (329)
.++||+|++|.+|+ +|.. ...... +..+|..+.++|||||.++..+ +.+++.
T Consensus 146 ----------~~~fD~V~sd~~~~-~g~~-------------~~d~~~--~l~~L~~~~~~LkpGG~~v~kv--~~~~~~ 197 (305)
T 2p41_A 146 ----------PERCDTLLCDIGES-SPNP-------------TVEAGR--TLRVLNLVENWLSNNTQFCVKV--LNPYMS 197 (305)
T ss_dssp ----------CCCCSEEEECCCCC-CSSH-------------HHHHHH--HHHHHHHHHHHCCTTCEEEEEE--SCCCSH
T ss_pred ----------cCCCCEEEECCccc-cCcc-------------hhhHHH--HHHHHHHHHHHhCCCCEEEEEe--CCCCCc
Confidence 35899999999986 5541 011111 1247888899999999888643 333222
Q ss_pred --HHHHHHHHhhCCCc
Q psy15212 284 --EEQAIIFSKNHKDS 297 (329)
Q Consensus 284 --e~vv~~~l~~~~~~ 297 (329)
.+.+..+...+..+
T Consensus 198 ~~~~~l~~l~~~f~~v 213 (305)
T 2p41_A 198 SVIEKMEALQRKHGGA 213 (305)
T ss_dssp HHHHHHHHHHHHHCCE
T ss_pred hHHHHHHHHHHHcCCE
Confidence 24444444444443
No 158
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.29 E-value=1.5e-11 Score=109.98 Aligned_cols=107 Identities=22% Similarity=0.233 Sum_probs=85.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
..++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.+++++...+..++++.+|+....
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~---------------- 101 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA---------------- 101 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC----------------
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc----------------
Confidence 456789999999999999999986 569999999999999999999998888999999998764
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
..+.||.|++... .... ... ....++|+.+.++|+|||.++..+
T Consensus 102 ---~~~~fD~v~~~~~--~~~~----------~~~-------~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 102 ---FKNEFDAVTMFFS--TIMY----------FDE-------EDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp ---CCSCEEEEEECSS--GGGG----------SCH-------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---cCCCccEEEEcCC--chhc----------CCH-------HHHHHHHHHHHHHcCCCeEEEEec
Confidence 2367999996321 1110 011 124568999999999999998765
No 159
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.29 E-value=1.8e-11 Score=108.47 Aligned_cols=128 Identities=18% Similarity=0.161 Sum_probs=94.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
+.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++. ....++++.+|+...+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~---------------- 111 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG--EGPDLSFIKGDLSSLP---------------- 111 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT--CBTTEEEEECBTTBCS----------------
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc--ccCCceEEEcchhcCC----------------
Confidence 457889999999999999999986 569999999999999998875 2233889999988765
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCcc--------
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE-------- 281 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~-------- 281 (329)
+.++.||+|++.. ++.+.++ ...+|+.+.++|+|||++++++......
T Consensus 112 --~~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~ 167 (242)
T 3l8d_A 112 --FENEQFEAIMAIN------SLEWTEE----------------PLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPR 167 (242)
T ss_dssp --SCTTCEEEEEEES------CTTSSSC----------------HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGG
T ss_pred --CCCCCccEEEEcC------hHhhccC----------------HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhh
Confidence 3467899999632 2222221 2467999999999999999987432211
Q ss_pred ----------ccHHHHHHHHhhCCCcEEec
Q psy15212 282 ----------ESEEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 282 ----------Ene~vv~~~l~~~~~~~~~~ 301 (329)
-..+.+..++++. +|+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~ 196 (242)
T 3l8d_A 168 LYGKDVVCNTMMPWEFEQLVKEQ-GFKVVD 196 (242)
T ss_dssp GGTCCCSSCCCCHHHHHHHHHHT-TEEEEE
T ss_pred hccccccccCCCHHHHHHHHHHc-CCEEEE
Confidence 2234566777775 666554
No 160
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.28 E-value=2.1e-11 Score=121.63 Aligned_cols=179 Identities=16% Similarity=0.113 Sum_probs=118.5
Q ss_pred cceEEEechhHHHHhhhcC----CCCCCeEEeecCCCchHHHHHHHhCC----CEEEEEeCChhHHHHHHHHHHHcCCc-
Q psy15212 111 NGFCSIQDAAAQLAAPLLD----IRSGMYVLDACSAPGGKTCHLLEIAD----IKLISVDNNLSRLNMISENLKRLNLK- 181 (329)
Q Consensus 111 ~G~~~~Qd~~s~l~~~~l~----~~~g~~VLDlcag~G~kt~~la~~~~----~~v~avD~~~~rl~~l~~n~~~~g~~- 181 (329)
.|.+|--..-+.+.+.++. +.++.+|+|.|||+|++.+.+++.+. ..++|+|+++..+..++.|+...|+.
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 275 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI 275 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc
Confidence 4777766666777777776 67889999999999999999988752 69999999999999999999999983
Q ss_pred --eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCcccccccc--CCCCccc----CChhHHHHHHHH
Q psy15212 182 --ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRR--NPDIPWL----RRKNDIKKLSKY 253 (329)
Q Consensus 182 --v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~--~p~~~~~----~~~~~~~~l~~~ 253 (329)
+.+.++|...... +.....+||+|+.|||+++...-.. ..+.+|. ..+. ...
T Consensus 276 ~~~~I~~gDtL~~d~---------------p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~-----s~~ 335 (542)
T 3lkd_A 276 ENQFLHNADTLDEDW---------------PTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPK-----SKA 335 (542)
T ss_dssp GGEEEEESCTTTSCS---------------CCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCT-----TCC
T ss_pred CccceEecceecccc---------------cccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCC-----chh
Confidence 6899999876410 0013468999999999984321110 0111221 0000 011
Q ss_pred HHHHHHHHHhcCC-CCCEEEEEcCC-CCcccc-HHHHHHHHhhCCCcE-EecCCCcccCC
Q psy15212 254 SCKILNNLWKMLK-PGGKLLFVTCS-LWFEES-EEQAIIFSKNHKDSI-RLNSPGQLLPT 309 (329)
Q Consensus 254 q~~lL~~a~~~Lk-pgG~lvysTCS-~~~~En-e~vv~~~l~~~~~~~-~~~~~~~~~p~ 309 (329)
...++.+++++|+ +||++++.+-. +.-..+ +..+.+.|-+...+. ++..|..++.+
T Consensus 336 ~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~l~~II~LP~~lF~~ 395 (542)
T 3lkd_A 336 DFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEGAIDTVIGLPANIFFN 395 (542)
T ss_dssp HHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTTCEEEEEECCSSCSSS
T ss_pred hHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhCCceeEEEEccccccCC
Confidence 2358999999999 99998776533 221222 444444443332332 44455555553
No 161
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.28 E-value=7.4e-12 Score=115.18 Aligned_cols=130 Identities=20% Similarity=0.298 Sum_probs=93.6
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC--ceEEEecCccccch
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL--KATLILSDISKINL 194 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~--~v~~~~~D~~~~~~ 194 (329)
+......++..+.+.++++|||+|||+|..|..+++.. .+|+|+|+|+.+++.+++++...+. .++++.+|+.+.+
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~- 90 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD- 90 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC-
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc-
Confidence 44445555666778889999999999999999999875 5999999999999999999988776 3899999998765
Q ss_pred hhhhhhhcccccccccccCCCCCCEEEEccCCcccc-----ccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCC
Q psy15212 195 KKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSG-----VVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG 269 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G-----~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG 269 (329)
+ ..||.|++++|+..+. ++.+.+..... +..+|+++.. ...++|||
T Consensus 91 -----------------~--~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~--------~~m~qkEva~--r~vlkPGg 141 (285)
T 1zq9_A 91 -----------------L--PFFDTCVANLPYQISSPFVFKLLLHRPFFRCA--------ILMFQREFAL--RLVAKPGD 141 (285)
T ss_dssp -----------------C--CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEE--------EEEEEHHHHH--HHHCCTTC
T ss_pred -----------------c--hhhcEEEEecCcccchHHHHHHHhcCcchhhh--------hhhhhHHHHH--HHhcCCCC
Confidence 1 3799999999987542 22211111100 0001333332 23689999
Q ss_pred EEEEEcCCC
Q psy15212 270 KLLFVTCSL 278 (329)
Q Consensus 270 ~lvysTCS~ 278 (329)
.+ |+++|+
T Consensus 142 ~~-y~~lsv 149 (285)
T 1zq9_A 142 KL-YCRLSI 149 (285)
T ss_dssp TT-CSHHHH
T ss_pred cc-cchhhh
Confidence 86 887775
No 162
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.28 E-value=1.7e-11 Score=109.72 Aligned_cols=110 Identities=16% Similarity=0.140 Sum_probs=85.7
Q ss_pred hhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccc
Q psy15212 125 APLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 125 ~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
...+...++.+|||+|||+|..+..+++....+|+++|+++.+++.++++.. ...++++.+|+..++
T Consensus 37 ~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~----------- 103 (253)
T 3g5l_A 37 KKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIA----------- 103 (253)
T ss_dssp HTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCC-----------
T ss_pred HHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCC-----------
Confidence 3445556789999999999999999998744599999999999999998876 334889999988765
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
+.++.||+|++.- ++..-++ ..++|+.+.++|||||++++++.
T Consensus 104 -------~~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 104 -------IEPDAYNVVLSSL------ALHYIAS----------------FDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp -------CCTTCEEEEEEES------CGGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------CCCCCeEEEEEch------hhhhhhh----------------HHHHHHHHHHHcCCCcEEEEEeC
Confidence 3457899999743 2211111 34689999999999999999753
No 163
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.27 E-value=3.2e-11 Score=111.95 Aligned_cols=130 Identities=19% Similarity=0.189 Sum_probs=89.7
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHc-----CCceEEEecCccccchhhhhhhhcc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRL-----NLKATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~-----g~~v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
..++.+|||+|||+|+.+..+++..+ .+|+++|+|+.+++.+++++... .-+++++.+|+..+.
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~---------- 162 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFV---------- 162 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHH----------
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHH----------
Confidence 34568999999999999999998654 69999999999999999987532 123889999988754
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC-Cccc
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL-WFEE 282 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~-~~~E 282 (329)
....+++||+|++|++... + |. ..+ .+.++++.+.+.|+|||+++..+.+. ...+
T Consensus 163 ------~~~~~~~fDvIi~d~~~~~-~-----~~----------~~l--~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~ 218 (304)
T 3bwc_A 163 ------RQTPDNTYDVVIIDTTDPA-G-----PA----------SKL--FGEAFYKDVLRILKPDGICCNQGESIWLDLE 218 (304)
T ss_dssp ------HSSCTTCEEEEEEECC---------------------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHH
T ss_pred ------HhccCCceeEEEECCCCcc-c-----cc----------hhh--hHHHHHHHHHHhcCCCcEEEEecCCcccchH
Confidence 1012568999999987421 0 10 000 12568899999999999999875442 2223
Q ss_pred cHHHHHHHHhh
Q psy15212 283 SEEQAIIFSKN 293 (329)
Q Consensus 283 ne~vv~~~l~~ 293 (329)
....+...+++
T Consensus 219 ~~~~~~~~l~~ 229 (304)
T 3bwc_A 219 LIEKMSRFIRE 229 (304)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 33334444444
No 164
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.27 E-value=1.7e-11 Score=111.96 Aligned_cols=112 Identities=18% Similarity=0.177 Sum_probs=87.8
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
+.++.+|||+|||+|..+..+++....+|+++|+++.+++.+++++...+.. ++++.+|+...+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------------- 127 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH-------------- 127 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC--------------
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc--------------
Confidence 4678899999999999999988764369999999999999999999988873 789999988764
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCccc-CChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWL-RRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~-~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
...++.||+|+++.. +. +. ... ....++|+.+.++|||||+++++++.
T Consensus 128 ---~~~~~~fD~v~~~~~------l~------~~~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 128 ---MDLGKEFDVISSQFS------FH------YAFSTS-------ESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp ---CCCSSCEEEEEEESC------GG------GGGSSH-------HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ---cCCCCCcCEEEECch------hh------hhcCCH-------HHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 113578999997632 10 00 011 12456899999999999999998765
No 165
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.27 E-value=1.7e-11 Score=122.40 Aligned_cols=181 Identities=14% Similarity=0.140 Sum_probs=116.9
Q ss_pred cceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhC----------------CCEEEEEeCChhHHHHHHHH
Q psy15212 111 NGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIA----------------DIKLISVDNNLSRLNMISEN 174 (329)
Q Consensus 111 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~----------------~~~v~avD~~~~rl~~l~~n 174 (329)
.|.++--..-+.+++.++.+.++ +|||.|||+|++.+.+++.+ ...++|+|+++..++.++.|
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 47777777778888888888887 99999999999998886543 24899999999999999999
Q ss_pred HHHcCCceEE--EecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCcccccccc--CCCCcccCChhH----
Q psy15212 175 LKRLNLKATL--ILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRR--NPDIPWLRRKND---- 246 (329)
Q Consensus 175 ~~~~g~~v~~--~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~--~p~~~~~~~~~~---- 246 (329)
+...|+...+ .++|....+ .....+||+|++|||++....-.. ..+.+|......
T Consensus 303 l~l~gi~~~i~i~~gDtL~~~-----------------~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~ 365 (544)
T 3khk_A 303 MVIRGIDFNFGKKNADSFLDD-----------------QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRI 365 (544)
T ss_dssp HHHTTCCCBCCSSSCCTTTSC-----------------SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEE
T ss_pred HHHhCCCcccceeccchhcCc-----------------ccccccccEEEECCCcCCccccchhhhhhhhhhcCccccccc
Confidence 9999886433 777765433 123468999999999986421110 111122111000
Q ss_pred -HHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC--CCcc-ccHHHHHHHHhhCCCc-EEecCCCcccCC
Q psy15212 247 -IKKLSKYSCKILNNLWKMLKPGGKLLFVTCS--LWFE-ESEEQAIIFSKNHKDS-IRLNSPGQLLPT 309 (329)
Q Consensus 247 -~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS--~~~~-Ene~vv~~~l~~~~~~-~~~~~~~~~~p~ 309 (329)
+..-...+..++.+++++|+|||++++.+-. +... -.+..+.+.|-++..+ .++..|..++.+
T Consensus 366 ~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~l~aII~LP~~lF~~ 433 (544)
T 3khk_A 366 LTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLVECMVALPGQLFTN 433 (544)
T ss_dssp CCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTCEEEEEECCTTBCCS
T ss_pred ccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCcHhEEEECCCCCCCC
Confidence 0000011235889999999999998877532 2222 2444555554444333 234455455543
No 166
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.26 E-value=1.2e-11 Score=114.76 Aligned_cols=112 Identities=18% Similarity=0.168 Sum_probs=84.1
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHH--cCC---ceEEEecCccccchhhhhhhhccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKR--LNL---KATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~--~g~---~v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
..+.+|||+|||+|+.+..+++..+ .+|+++|+++.+++.+++++.. .++ +++++.+|+....
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l----------- 162 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFM----------- 162 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHH-----------
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHH-----------
Confidence 4567999999999999999998755 7999999999999999999876 233 3899999987642
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
. ...++||+|++|+|... + |. . .....++++.+.+.|+|||.++..+.+
T Consensus 163 -----~-~~~~~fD~Ii~d~~~~~-~-----~~-------~-----~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 163 -----K-QNQDAFDVIITDSSDPM-G-----PA-------E-----SLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp -----H-TCSSCEEEEEEECC-----------------------------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----h-hCCCCceEEEECCCCCC-C-----cc-------h-----hhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 1 12468999999987431 1 00 0 012346889999999999999988744
No 167
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.26 E-value=3.1e-11 Score=109.31 Aligned_cols=164 Identities=14% Similarity=-0.047 Sum_probs=101.5
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC----------------------------
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL---------------------------- 180 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~---------------------------- 180 (329)
.+.+|.+|||+|||+|..+..++.....+|+|+|+|+.+++.++++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 3567889999999999887766654224899999999999999998765320
Q ss_pred --ceE-EEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHH
Q psy15212 181 --KAT-LILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKI 257 (329)
Q Consensus 181 --~v~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~l 257 (329)
.+. ++.+|+..... +.....++||+|++- .++.. +.........+
T Consensus 132 ~~~i~~~~~~D~~~~~~--------------~~~~~~~~fD~V~~~------~~l~~------------i~~~~~~~~~~ 179 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNP--------------LAPAVLPLADCVLTL------LAMEC------------ACCSLDAYRAA 179 (263)
T ss_dssp HHHEEEEEECCTTSSST--------------TTTCCCCCEEEEEEE------SCHHH------------HCSSHHHHHHH
T ss_pred HhhhheEEeccccCCCC--------------CCccccCCCCEeeeh------HHHHH------------hcCCHHHHHHH
Confidence 122 77888776320 000124589999952 11110 00001223568
Q ss_pred HHHHHhcCCCCCEEEEEcCCCCc------------cccHHHHHHHHhhCCCcEEecCC---CcccCCCCCCCCCCeEEEE
Q psy15212 258 LNNLWKMLKPGGKLLFVTCSLWF------------EESEEQAIIFSKNHKDSIRLNSP---GQLLPTVNKKQDYDGFFYS 322 (329)
Q Consensus 258 L~~a~~~LkpgG~lvysTCS~~~------------~Ene~vv~~~l~~~~~~~~~~~~---~~~~p~~~~~~~~~gff~a 322 (329)
|+++.++|||||+|+.++..-.. .-.++.+...+... +|+.+... ...-+.. .+.+++|+.
T Consensus 180 l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~a-GF~i~~~~~~~~~~~~~~---~~~~~~~~~ 255 (263)
T 2a14_A 180 LCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDA-GFDIEQLLHSPQSYSVTN---AANNGVCCI 255 (263)
T ss_dssp HHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHT-TEEEEEEEEECCCCCTTT---CCCCCEEEE
T ss_pred HHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHC-CCEEEEEeeccccccccc---CCCCceEEE
Confidence 99999999999999999632110 01455666667665 66654321 1111111 345678888
Q ss_pred EEEecC
Q psy15212 323 LFQKRK 328 (329)
Q Consensus 323 ~l~k~~ 328 (329)
+.+|..
T Consensus 256 ~a~K~~ 261 (263)
T 2a14_A 256 VARKKP 261 (263)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 888764
No 168
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.26 E-value=2.3e-11 Score=112.86 Aligned_cols=116 Identities=17% Similarity=0.171 Sum_probs=79.0
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-------eEEEecCccccch-hhhhhhhcc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-------ATLILSDISKINL-KKLYIDINK 203 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-------v~~~~~D~~~~~~-~~~~~~~~~ 203 (329)
+|.+|||+|||+|+.+..++...+++|+|+|+|+.+++.++++....+.. +++.+.|+..-.. ..+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~----- 122 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVR----- 122 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHH-----
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhh-----
Confidence 57899999999998777666544479999999999999999998877643 4566777632110 0000
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
..+.+++||+|+|-- ++ .|.+..++ +..+|+++.++|||||+++.+|..
T Consensus 123 ------~~~~~~~FD~V~~~~------~l------hy~~~~~~-------~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 123 ------EVFYFGKFNIIDWQF------AI------HYSFHPRH-------YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp ------TTCCSSCEEEEEEES------CG------GGTCSTTT-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------ccccCCCeeEEEECc------hH------HHhCCHHH-------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 112356899998521 11 11112122 246899999999999999998763
No 169
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.25 E-value=3.4e-11 Score=106.68 Aligned_cols=108 Identities=19% Similarity=0.265 Sum_probs=84.7
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
..++.+|||+|||+|..+..+++. .+|+++|+++.+++.+++++...+..++++.+|+...+
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---------------- 92 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE---------------- 92 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC----------------
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC----------------
Confidence 345789999999999999999986 69999999999999999999988867899999988764
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
..+.||.|++...+ +. +..+.. ....+|+.+.++|+|||++++++.
T Consensus 93 ---~~~~fD~v~~~~~~-----~~------~~~~~~-------~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 93 ---LPEPVDAITILCDS-----LN------YLQTEA-------DVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp ---CSSCEEEEEECTTG-----GG------GCCSHH-------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CCCCcCEEEEeCCc-----hh------hcCCHH-------HHHHHHHHHHHhcCCCeEEEEEcC
Confidence 13689999975311 11 111111 235678999999999999998654
No 170
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.25 E-value=9.6e-12 Score=110.51 Aligned_cols=112 Identities=15% Similarity=0.123 Sum_probs=83.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCC-hhHHHHH---HHHHHHcCCc-eEEEecCccccchhhhhhhhcc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNN-LSRLNMI---SENLKRLNLK-ATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~-~~rl~~l---~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
.+++++|||+|||+|..+..+++..+ ..|+|+|+| +.+++.+ ++++.+.|+. +.++.+|+..++
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~---------- 91 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLP---------- 91 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCC----------
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhh----------
Confidence 36788999999999999999997655 689999999 6666655 8888888886 899999998765
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
..+ ...+|.|.++.|... ...........+|+.+.++|||||++++++
T Consensus 92 ------~~~-~d~v~~i~~~~~~~~-----------------~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 92 ------FEL-KNIADSISILFPWGT-----------------LLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp ------GGG-TTCEEEEEEESCCHH-----------------HHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred ------hhc-cCeEEEEEEeCCCcH-----------------HhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 111 256888888776321 111111123467999999999999999844
No 171
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.25 E-value=5.2e-11 Score=105.47 Aligned_cols=128 Identities=12% Similarity=0.043 Sum_probs=94.8
Q ss_pred CCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC--ceEEEecCccccchhhhhhhhccccccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL--KATLILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~--~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
+.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...+. .++++.+|+..+.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------------- 128 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP-ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR----------------- 128 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-----------------
T ss_pred CCCEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-----------------
Confidence 349999999999999999863 46999999999999999999987654 3899999998764
Q ss_pred ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCcc-------cc
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE-------ES 283 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~-------En 283 (329)
....||+|++... +..- .+++ ...+|+.+.++|||||+++..+.+.... -.
T Consensus 129 --~~~~fD~v~~~~~------l~~~-------~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3lcc_A 129 --PTELFDLIFDYVF------FCAI-------EPEM-------RPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVD 186 (235)
T ss_dssp --CSSCEEEEEEESS------TTTS-------CGGG-------HHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCC
T ss_pred --CCCCeeEEEEChh------hhcC-------CHHH-------HHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCC
Confidence 3458999996432 1111 1111 3467999999999999999876544322 24
Q ss_pred HHHHHHHHhhCCCcEEec
Q psy15212 284 EEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 284 e~vv~~~l~~~~~~~~~~ 301 (329)
.+.+..+++.. +|+.+.
T Consensus 187 ~~~~~~~l~~~-Gf~~~~ 203 (235)
T 3lcc_A 187 VSTFEEVLVPI-GFKAVS 203 (235)
T ss_dssp HHHHHHHHGGG-TEEEEE
T ss_pred HHHHHHHHHHc-CCeEEE
Confidence 56677777775 666543
No 172
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.25 E-value=2.4e-11 Score=109.79 Aligned_cols=109 Identities=11% Similarity=0.023 Sum_probs=81.2
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHH------------------cCCceEEEecCcc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKR------------------LNLKATLILSDIS 190 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~------------------~g~~v~~~~~D~~ 190 (329)
.+.++.+|||+|||+|..+..+|+. +..|+|+|+|+.+++.++++... .+..++++++|+.
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 3467889999999999999999986 56999999999999999776531 1234899999998
Q ss_pred ccchhhhhhhhcccccccccccC-CCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCC
Q psy15212 191 KINLKKLYIDINKKTNNRFRFYK-NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG 269 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~-~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG 269 (329)
.++ .. .+.||.|++-. ++..-| .. ....+++++.++|||||
T Consensus 144 ~l~------------------~~~~~~FD~V~~~~------~l~~l~-------~~-------~~~~~l~~~~~~LkpGG 185 (252)
T 2gb4_A 144 DLP------------------RANIGKFDRIWDRG------ALVAIN-------PG-------DHDRYADIILSLLRKEF 185 (252)
T ss_dssp TGG------------------GGCCCCEEEEEESS------STTTSC-------GG-------GHHHHHHHHHHTEEEEE
T ss_pred cCC------------------cccCCCEEEEEEhh------hhhhCC-------HH-------HHHHHHHHHHHHcCCCe
Confidence 875 12 26899999532 221111 11 13457899999999999
Q ss_pred EEEEEcC
Q psy15212 270 KLLFVTC 276 (329)
Q Consensus 270 ~lvysTC 276 (329)
++++.|.
T Consensus 186 ~l~l~~~ 192 (252)
T 2gb4_A 186 QYLVAVL 192 (252)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9976653
No 173
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.25 E-value=8.9e-12 Score=110.96 Aligned_cols=132 Identities=13% Similarity=0.011 Sum_probs=96.9
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhcccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
.++.+|||+|||+|..+..+++....+|+++|+++.+++.+++++...+.. ++++.+|+..+.
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~---------------- 141 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT---------------- 141 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC----------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC----------------
Confidence 368899999999999999988765569999999999999999999877533 788999987754
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCc---------
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF--------- 280 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~--------- 280 (329)
...+.||+|+++.. +..-+ .. ....+|+.+.++|+|||++++++.....
T Consensus 142 --~~~~~fD~v~~~~~------l~~~~-------~~-------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~ 199 (241)
T 2ex4_A 142 --PEPDSYDVIWIQWV------IGHLT-------DQ-------HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDS 199 (241)
T ss_dssp --CCSSCEEEEEEESC------GGGSC-------HH-------HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTT
T ss_pred --CCCCCEEEEEEcch------hhhCC-------HH-------HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCC
Confidence 23468999997632 21111 11 1346899999999999999997642210
Q ss_pred --cccHHHHHHHHhhCCCcEEec
Q psy15212 281 --EESEEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 281 --~Ene~vv~~~l~~~~~~~~~~ 301 (329)
.-+.+.+..++++. +|+.+.
T Consensus 200 ~~~~~~~~~~~~l~~a-Gf~~~~ 221 (241)
T 2ex4_A 200 SVCRDLDVVRRIICSA-GLSLLA 221 (241)
T ss_dssp EEEEBHHHHHHHHHHT-TCCEEE
T ss_pred cccCCHHHHHHHHHHc-CCeEEE
Confidence 11566677777776 565443
No 174
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.25 E-value=9e-12 Score=117.42 Aligned_cols=112 Identities=20% Similarity=0.166 Sum_probs=86.9
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
.+...++.+|||+|||+|..+..+++....+|+|+|+++ +++.++++++.+|+. ++++.+|+.++.
T Consensus 59 ~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------- 126 (340)
T 2fyt_A 59 NPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH----------- 126 (340)
T ss_dssp CGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-----------
T ss_pred hhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc-----------
Confidence 344678899999999999999999986336999999996 999999999999983 899999998765
Q ss_pred ccccccccCCCCCCEEEEccC-CccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 205 TNNRFRFYKNKYFDRILADLP-CTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~P-Csg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+..++||+|++++. +... ... ....+|..+.++|||||+++.+.|+
T Consensus 127 -------~~~~~~D~Ivs~~~~~~l~-------------~~~-------~~~~~l~~~~~~LkpgG~lip~~~~ 173 (340)
T 2fyt_A 127 -------LPVEKVDVIISEWMGYFLL-------------FES-------MLDSVLYAKNKYLAKGGSVYPDICT 173 (340)
T ss_dssp -------CSCSCEEEEEECCCBTTBT-------------TTC-------HHHHHHHHHHHHEEEEEEEESCEEE
T ss_pred -------CCCCcEEEEEEcCchhhcc-------------CHH-------HHHHHHHHHHhhcCCCcEEEcccce
Confidence 24478999998762 2200 011 1235788889999999999855444
No 175
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.25 E-value=2.2e-11 Score=106.01 Aligned_cols=112 Identities=17% Similarity=0.180 Sum_probs=85.9
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhh
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDI 201 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~ 201 (329)
+...+....++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++ .+.. ++++.+|+..+.
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~-------- 103 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWT-------- 103 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCC--------
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCC--------
Confidence 3333334677889999999999999999987 5699999999999999888 5544 899999987653
Q ss_pred cccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 202 NKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 202 ~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
..+.||+|++.. ++.+-++ .....+|+.+.++|+|||++++++.+.
T Consensus 104 -----------~~~~~D~v~~~~------~l~~~~~--------------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 104 -----------PDRQWDAVFFAH------WLAHVPD--------------DRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp -----------CSSCEEEEEEES------CGGGSCH--------------HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -----------CCCceeEEEEec------hhhcCCH--------------HHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 457899999742 2221111 123568999999999999999997654
No 176
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.25 E-value=1.6e-11 Score=113.03 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=85.0
Q ss_pred CCCCeEEeecCCCchHHHHHHHhC-C-CEEEEEeCChhHHHHHHHHHHHc---CCceEEEecCccccchhhhhhhhcccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIA-D-IKLISVDNNLSRLNMISENLKRL---NLKATLILSDISKINLKKLYIDINKKT 205 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~-~-~~v~avD~~~~rl~~l~~n~~~~---g~~v~~~~~D~~~~~~~~~~~~~~~~~ 205 (329)
.++.+|||+|||+|..+..+++.. + .+|+|+|+|+.+++.++++++.. .-.++++++|+..++...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~--------- 105 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG--------- 105 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC---------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccc---------
Confidence 578899999999999999999865 3 79999999999999999999987 234899999998865100
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+. ....++||.|++..... |. . ...+++.+.+.|+|||+|++.+++
T Consensus 106 ~~---~~~~~~fD~V~~~~~l~------------~~-~----------~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 106 AD---SVDKQKIDMITAVECAH------------WF-D----------FEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp TT---TTTSSCEEEEEEESCGG------------GS-C----------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cc---cccCCCeeEEeHhhHHH------------Hh-C----------HHHHHHHHHHhcCCCcEEEEEecC
Confidence 00 00126899999743211 11 1 346899999999999999885443
No 177
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.25 E-value=3.7e-11 Score=109.16 Aligned_cols=114 Identities=14% Similarity=0.008 Sum_probs=79.6
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhc
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDIN 202 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~ 202 (329)
.+...+.+.+|.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.+++++....+...+...+.....
T Consensus 36 ~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~--------- 105 (261)
T 3iv6_A 36 NDIFLENIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPK--------- 105 (261)
T ss_dssp HHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCG---------
T ss_pred HHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeeccccccc---------
Confidence 3445667888999999999999999999986 469999999999999999998765222233222220000
Q ss_pred ccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 203 KKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 203 ~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
...+.||+|+++.... + ...+ .....+..+.++| |||+|+.|..
T Consensus 106 ---------~~~~~fD~Vv~~~~l~------~-------~~~~-------~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 106 ---------ELAGHFDFVLNDRLIN------R-------FTTE-------EARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp ---------GGTTCCSEEEEESCGG------G-------SCHH-------HHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred ---------ccCCCccEEEEhhhhH------h-------CCHH-------HHHHHHHHHHHhC-cCcEEEEEec
Confidence 1246899999875421 0 1111 2345788888899 9999998854
No 178
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.24 E-value=3.7e-11 Score=109.60 Aligned_cols=105 Identities=20% Similarity=0.293 Sum_probs=85.0
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.+++++...|+. ++++.+|+..+.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------------- 130 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA---------------- 130 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG----------------
T ss_pred CCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh----------------
Confidence 3679999999999999999987 669999999999999999999999984 899999998764
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
. +.++.||+|++... +..-++ ...+|+.+.++|||||++++++.
T Consensus 131 ~-~~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 131 S-HLETPVDLILFHAV------LEWVAD----------------PRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp G-GCSSCEEEEEEESC------GGGCSC----------------HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred h-hcCCCceEEEECch------hhcccC----------------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 1 24578999997532 222221 24589999999999999998764
No 179
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.24 E-value=5.8e-11 Score=99.66 Aligned_cols=124 Identities=16% Similarity=0.121 Sum_probs=90.6
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.+.+.++.+|||+|||+|..+..+++... +++++|+++.+++.++++ .-.++++.+| .+
T Consensus 12 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~v~~~~~d---~~------------- 70 (170)
T 3i9f_A 12 NIFEGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK----FDSVITLSDP---KE------------- 70 (170)
T ss_dssp HHHSSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH----CTTSEEESSG---GG-------------
T ss_pred hcCcCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh----CCCcEEEeCC---CC-------------
Confidence 34567888999999999999999998765 999999999999999988 2247888888 22
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccc----
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEE---- 282 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~E---- 282 (329)
+..+.||.|++..... .-++ ...+++++.+.|||||++++++......+
T Consensus 71 -----~~~~~~D~v~~~~~l~------~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 123 (170)
T 3i9f_A 71 -----IPDNSVDFILFANSFH------DMDD----------------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPP 123 (170)
T ss_dssp -----SCTTCEEEEEEESCST------TCSC----------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSC
T ss_pred -----CCCCceEEEEEccchh------cccC----------------HHHHHHHHHHhcCCCCEEEEEEcCccccccCch
Confidence 2457899999753321 1111 24689999999999999999875433211
Q ss_pred -----cHHHHHHHHhhCCCcEEec
Q psy15212 283 -----SEEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 283 -----ne~vv~~~l~~~~~~~~~~ 301 (329)
..+.+..+++ +|+.+.
T Consensus 124 ~~~~~~~~~~~~~l~---Gf~~~~ 144 (170)
T 3i9f_A 124 LSIRMDEKDYMGWFS---NFVVEK 144 (170)
T ss_dssp GGGCCCHHHHHHHTT---TEEEEE
T ss_pred HhhhcCHHHHHHHHh---CcEEEE
Confidence 3455666666 676554
No 180
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.24 E-value=5.1e-11 Score=106.67 Aligned_cols=116 Identities=16% Similarity=0.155 Sum_probs=87.4
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchh
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLK 195 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~ 195 (329)
|.....-....+.+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.++++ .-.++++.+|+....
T Consensus 18 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~~~-- 91 (259)
T 2p35_A 18 RTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR----LPNTNFGKADLATWK-- 91 (259)
T ss_dssp GGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----STTSEEEECCTTTCC--
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CCCcEEEECChhhcC--
Confidence 333333344455677889999999999999999998754 6999999999999999887 223788899987653
Q ss_pred hhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 196 KLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
.++.||+|++... +..-+ ....+|+.+.+.|||||++++++
T Consensus 92 -----------------~~~~fD~v~~~~~------l~~~~----------------~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 92 -----------------PAQKADLLYANAV------FQWVP----------------DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp -----------------CSSCEEEEEEESC------GGGST----------------THHHHHHHHGGGEEEEEEEEEEE
T ss_pred -----------------ccCCcCEEEEeCc------hhhCC----------------CHHHHHHHHHHhcCCCeEEEEEe
Confidence 3468999997432 11111 13468999999999999999987
Q ss_pred CC
Q psy15212 276 CS 277 (329)
Q Consensus 276 CS 277 (329)
..
T Consensus 133 ~~ 134 (259)
T 2p35_A 133 PD 134 (259)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 181
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.24 E-value=8.3e-12 Score=115.75 Aligned_cols=93 Identities=22% Similarity=0.311 Sum_probs=75.6
Q ss_pred HhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhc
Q psy15212 124 AAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDIN 202 (329)
Q Consensus 124 ~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~ 202 (329)
+...|.+++|.+|||+|||+|+.+..+++..+ ++|+|+|+|+.+++.+++|++.+|-.++++++|+..+.. .+
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~-~l----- 91 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF-LL----- 91 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH-HH-----
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHH-HH-----
Confidence 44566788999999999999999999999874 799999999999999999999888458999999887540 00
Q ss_pred ccccccccccCCCCCCEEEEccCCccc
Q psy15212 203 KKTNNRFRFYKNKYFDRILADLPCTGS 229 (329)
Q Consensus 203 ~~~~~~~~~~~~~~fD~Vl~D~PCsg~ 229 (329)
.......||.|++|+|||+.
T Consensus 92 -------~~~g~~~~D~Vl~D~gvSs~ 111 (301)
T 1m6y_A 92 -------KTLGIEKVDGILMDLGVSTY 111 (301)
T ss_dssp -------HHTTCSCEEEEEEECSCCHH
T ss_pred -------HhcCCCCCCEEEEcCccchh
Confidence 00011579999999999853
No 182
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.24 E-value=5.9e-12 Score=110.33 Aligned_cols=113 Identities=15% Similarity=0.200 Sum_probs=82.9
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHH----HHcCCc-eEEEecCccccchhhhhhh
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENL----KRLNLK-ATLILSDISKINLKKLYID 200 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~----~~~g~~-v~~~~~D~~~~~~~~~~~~ 200 (329)
.+.+.++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+.++. ...++. ++++++|+..++
T Consensus 22 ~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~------- 94 (218)
T 3mq2_A 22 QLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP------- 94 (218)
T ss_dssp HHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC-------
T ss_pred HhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC-------
Confidence 34577899999999999999999999874 79999999999888654443 345664 899999998865
Q ss_pred hcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
+..+. |.|.+..+.. ....++...+..+|+.+.++|||||+++++.
T Consensus 95 -----------~~~~~-d~v~~~~~~~-----------------~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 95 -----------PLSGV-GELHVLMPWG-----------------SLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp -----------SCCCE-EEEEEESCCH-----------------HHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred -----------CCCCC-CEEEEEccch-----------------hhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 23344 7777555421 1111122223568999999999999999853
No 183
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.24 E-value=2.3e-11 Score=116.37 Aligned_cols=112 Identities=15% Similarity=0.218 Sum_probs=86.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHc-----C----CceEEEecCccccchhhhh
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRL-----N----LKATLILSDISKINLKKLY 198 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~-----g----~~v~~~~~D~~~~~~~~~~ 198 (329)
+.+|.+|||+|||+|..+..+++..+ ++|+++|+++.+++.+++++++. | -.++++.+|+..+...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~--- 157 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA--- 157 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC---
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc---
Confidence 56789999999999999999998853 69999999999999999998876 4 3489999999875200
Q ss_pred hhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 199 IDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
.+ ..+.++.||+|+++.. +...++ ...+|+++.++|||||+|++++
T Consensus 158 ------~~---~~~~~~~fD~V~~~~~------l~~~~d----------------~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 158 ------EP---EGVPDSSVDIVISNCV------CNLSTN----------------KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp ------BS---CCCCTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------cc---CCCCCCCEEEEEEccc------hhcCCC----------------HHHHHHHHHHHcCCCCEEEEEE
Confidence 00 0134578999997643 221111 2468999999999999999875
No 184
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.24 E-value=8.1e-11 Score=101.67 Aligned_cols=125 Identities=15% Similarity=0.071 Sum_probs=93.4
Q ss_pred CCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRFY 212 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
+.+|||+|||+|..+..+++. +.+|+|+|+++.+++.++++.. .++++.+|+..++ +
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~------------------~ 98 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQTHP----SVTFHHGTITDLS------------------D 98 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHCT----TSEEECCCGGGGG------------------G
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhCC----CCeEEeCcccccc------------------c
Confidence 789999999999999999986 5599999999999999988732 4789999988765 3
Q ss_pred CCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCc------------
Q psy15212 213 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF------------ 280 (329)
Q Consensus 213 ~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~------------ 280 (329)
.++.||+|++.. ++.+-+ .++ ...+|+.+.++|+|||++++++.....
T Consensus 99 ~~~~fD~v~~~~------~l~~~~-------~~~-------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~ 158 (203)
T 3h2b_A 99 SPKRWAGLLAWY------SLIHMG-------PGE-------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAY 158 (203)
T ss_dssp SCCCEEEEEEES------SSTTCC-------TTT-------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEE
T ss_pred CCCCeEEEEehh------hHhcCC-------HHH-------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhc
Confidence 457899999743 222211 111 356899999999999999998755332
Q ss_pred cccHHHHHHHHhhCCCcEEec
Q psy15212 281 EESEEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 281 ~Ene~vv~~~l~~~~~~~~~~ 301 (329)
.-..+.+..++++. +|+.+.
T Consensus 159 ~~~~~~~~~~l~~~-Gf~~~~ 178 (203)
T 3h2b_A 159 RWPLPELAQALETA-GFQVTS 178 (203)
T ss_dssp ECCHHHHHHHHHHT-TEEEEE
T ss_pred cCCHHHHHHHHHHC-CCcEEE
Confidence 12356677777776 676554
No 185
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.24 E-value=5.1e-11 Score=107.30 Aligned_cols=103 Identities=14% Similarity=0.152 Sum_probs=79.5
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.+++++. .++++.+|+..++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~----------------- 106 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF-GTVEGLELSADMLAIARRRNP----DAVLHHGDMRDFS----------------- 106 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS-SEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTCC-----------------
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCC----CCEEEECChHHCC-----------------
Confidence 456899999999999999999764 599999999999999998754 4788999998865
Q ss_pred ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
.++.||+|++... ++.. ..+.+ ....+|+.+.++|||||+++.++
T Consensus 107 --~~~~fD~v~~~~~-----~l~~------~~~~~-------~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 107 --LGRRFSAVTCMFS-----SIGH------LAGQA-------ELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp --CSCCEEEEEECTT-----GGGG------SCHHH-------HHHHHHHHHHHTEEEEEEEEECC
T ss_pred --ccCCcCEEEEcCc-----hhhh------cCCHH-------HHHHHHHHHHHhcCCCcEEEEEe
Confidence 2578999996431 1111 11111 23568999999999999999864
No 186
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.23 E-value=1e-10 Score=112.12 Aligned_cols=103 Identities=17% Similarity=0.222 Sum_probs=80.1
Q ss_pred CcccccceEEEechhH---HHHh---hhcCCCCCCeEEeecCCCchHHHHHHHhCC------------------------
Q psy15212 106 IPKFFNGFCSIQDAAA---QLAA---PLLDIRSGMYVLDACSAPGGKTCHLLEIAD------------------------ 155 (329)
Q Consensus 106 ~~~~~~G~~~~Qd~~s---~l~~---~~l~~~~g~~VLDlcag~G~kt~~la~~~~------------------------ 155 (329)
..+++.|+-..|..+. .+++ .+....++..|||+|||+|++++.+|....
T Consensus 163 ~~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~ 242 (385)
T 3ldu_A 163 DALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWW 242 (385)
T ss_dssp SCTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHH
T ss_pred ChhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHH
Confidence 3566777765553331 1333 344567889999999999999999887531
Q ss_pred ---------------CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccccccccCCCCCC
Q psy15212 156 ---------------IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFD 218 (329)
Q Consensus 156 ---------------~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD 218 (329)
..|+|+|+|+.+++.+++|++..|+. +++.++|+.++. ....||
T Consensus 243 ~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~-------------------~~~~~D 303 (385)
T 3ldu_A 243 DVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFK-------------------SEDEFG 303 (385)
T ss_dssp HHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCC-------------------CSCBSC
T ss_pred HHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcC-------------------cCCCCc
Confidence 37999999999999999999999995 899999998865 235899
Q ss_pred EEEEccCCc
Q psy15212 219 RILADLPCT 227 (329)
Q Consensus 219 ~Vl~D~PCs 227 (329)
+|++|||+.
T Consensus 304 ~Iv~NPPyg 312 (385)
T 3ldu_A 304 FIITNPPYG 312 (385)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCc
Confidence 999999965
No 187
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.23 E-value=9.2e-11 Score=106.13 Aligned_cols=121 Identities=13% Similarity=0.057 Sum_probs=88.0
Q ss_pred HHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChh------HHHHHHHHHHHcCCc--eEEEecC-c
Q psy15212 121 AQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLS------RLNMISENLKRLNLK--ATLILSD-I 189 (329)
Q Consensus 121 s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~------rl~~l~~n~~~~g~~--v~~~~~D-~ 189 (329)
.......+.+.+|.+|||+|||+|..+..+++..+ .+|+++|+|+. +++.++++++..++. ++++.+| .
T Consensus 32 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 111 (275)
T 3bkx_A 32 RLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNL 111 (275)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCT
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChh
Confidence 33444556788999999999999999999998863 79999999997 999999999998873 8899998 3
Q ss_pred cccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCC
Q psy15212 190 SKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG 269 (329)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG 269 (329)
....+ + +.++.||+|++..... +.++ + ..+++....+++|||
T Consensus 112 ~~~~~---------------~-~~~~~fD~v~~~~~l~------~~~~------~----------~~~~~~~~~l~~~gG 153 (275)
T 3bkx_A 112 SDDLG---------------P-IADQHFDRVVLAHSLW------YFAS------A----------NALALLFKNMAAVCD 153 (275)
T ss_dssp TTCCG---------------G-GTTCCCSEEEEESCGG------GSSC------H----------HHHHHHHHHHTTTCS
T ss_pred hhccC---------------C-CCCCCEEEEEEccchh------hCCC------H----------HHHHHHHHHHhCCCC
Confidence 22110 1 2457899999754322 1111 1 125556666777899
Q ss_pred EEEEEcCCCC
Q psy15212 270 KLLFVTCSLW 279 (329)
Q Consensus 270 ~lvysTCS~~ 279 (329)
++++++.+..
T Consensus 154 ~l~~~~~~~~ 163 (275)
T 3bkx_A 154 HVDVAEWSMQ 163 (275)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEecCC
Confidence 9999876543
No 188
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.23 E-value=8e-12 Score=119.35 Aligned_cols=113 Identities=18% Similarity=0.183 Sum_probs=89.0
Q ss_pred cCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccc
Q psy15212 128 LDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKT 205 (329)
Q Consensus 128 l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~ 205 (329)
+...++.+|||+|||+|..+..+++....+|+|+|++ .+++.++++++.+|+. ++++.+|+.++.
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------ 125 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS------------ 125 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC------------
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC------------
Confidence 3456789999999999999999998633599999999 9999999999999986 899999998765
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
+ .++||+|++++..... . ... ....++..+.++|||||.++.+.+++.
T Consensus 126 ------~-~~~~D~Iv~~~~~~~l----~--------~e~-------~~~~~l~~~~~~LkpgG~li~~~~~~~ 173 (376)
T 3r0q_C 126 ------L-PEKVDVIISEWMGYFL----L--------RES-------MFDSVISARDRWLKPTGVMYPSHARMW 173 (376)
T ss_dssp ------C-SSCEEEEEECCCBTTB----T--------TTC-------THHHHHHHHHHHEEEEEEEESSEEEEE
T ss_pred ------c-CCcceEEEEcChhhcc----c--------chH-------HHHHHHHHHHhhCCCCeEEEEecCeEE
Confidence 2 2789999997632211 0 001 124578888899999999998776633
No 189
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.23 E-value=2.6e-11 Score=107.42 Aligned_cols=107 Identities=23% Similarity=0.185 Sum_probs=84.7
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRF 211 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...+..++++.+|+...+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------------ 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN------------------ 97 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC------------------
Confidence 6789999999999999999986 459999999999999999999988877889999988764
Q ss_pred cCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 212 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 212 ~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.. +.||+|++..- ++.+- .+.. ...++|+.+.++|+|||++++++.
T Consensus 98 ~~-~~fD~v~~~~~-----~l~~~------~~~~-------~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 98 IN-RKFDLITCCLD-----STNYI------IDSD-------DLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CS-CCEEEEEECTT-----GGGGC------CSHH-------HHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cc-CCceEEEEcCc-----ccccc------CCHH-------HHHHHHHHHHHhcCCCcEEEEEec
Confidence 23 68999997430 11111 1111 245689999999999999998643
No 190
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.23 E-value=2.2e-11 Score=115.09 Aligned_cols=112 Identities=18% Similarity=0.157 Sum_probs=88.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
..++.+|||+|||+|..+..+++....+|+|+|+| .+++.++++++..|+. ++++.+|+....
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-------------- 128 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVE-------------- 128 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCC--------------
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHcc--------------
Confidence 45788999999999999999998733699999999 5999999999999986 899999998865
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
++.++||+|++++...... + ... ...++..+.++|||||+++.+.+++.
T Consensus 129 ----~~~~~fD~Iis~~~~~~l~----~--------~~~-------~~~~l~~~~r~LkpgG~li~~~~~~~ 177 (349)
T 3q7e_A 129 ----LPVEKVDIIISEWMGYCLF----Y--------ESM-------LNTVLHARDKWLAPDGLIFPDRATLY 177 (349)
T ss_dssp ----CSSSCEEEEEECCCBBTBT----B--------TCC-------HHHHHHHHHHHEEEEEEEESCEEEEE
T ss_pred ----CCCCceEEEEEcccccccc----C--------chh-------HHHHHHHHHHhCCCCCEEccccceEE
Confidence 3457899999986533110 0 011 23578888899999999987766543
No 191
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.22 E-value=2.3e-11 Score=111.98 Aligned_cols=113 Identities=20% Similarity=0.290 Sum_probs=87.1
Q ss_pred hhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcC----CceEEEecCccccchhhhhhhh
Q psy15212 126 PLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLN----LKATLILSDISKINLKKLYIDI 201 (329)
Q Consensus 126 ~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g----~~v~~~~~D~~~~~~~~~~~~~ 201 (329)
..+.+.++ +|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...+ ..++++.+|+..++
T Consensus 77 ~~~~~~~~-~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~-------- 146 (299)
T 3g2m_A 77 TRTGPVSG-PVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA-------- 146 (299)
T ss_dssp HHHCCCCS-CEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC--------
T ss_pred HhhCCCCC-cEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC--------
Confidence 33444444 9999999999999999986 5699999999999999999999887 34899999998865
Q ss_pred cccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 202 NKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 202 ~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
.++.||.|++.. +++. + ..+ ..+..+|+.+.++|||||+|++++...
T Consensus 147 -----------~~~~fD~v~~~~-----~~~~-~------~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 147 -----------LDKRFGTVVISS-----GSIN-E------LDE-------ADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp -----------CSCCEEEEEECH-----HHHT-T------SCH-------HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -----------cCCCcCEEEECC-----cccc-c------CCH-------HHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 257899998521 1111 0 111 124578999999999999999987654
No 192
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.22 E-value=1.3e-11 Score=113.52 Aligned_cols=113 Identities=17% Similarity=0.235 Sum_probs=86.4
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcC-----CceEEEecCccccchhhhhhhhccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLN-----LKATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g-----~~v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
.++.+|||+|||+|+.+..+++..+ .+|+++|+++.+++.+++++...+ -+++++.+|+....
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l----------- 145 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFL----------- 145 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHH-----------
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHH-----------
Confidence 4567999999999999999998654 799999999999999999987643 23889999987643
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
.. ..++||+|++|++.. .|. . ..+ ...++++.+.+.|+|||.++..+++.
T Consensus 146 -----~~-~~~~fD~Ii~d~~~~-~~~-----~-------~~l-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 146 -----EN-VTNTYDVIIVDSSDP-IGP-----A-------ETL-----FNQNFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp -----HH-CCSCEEEEEEECCCT-TTG-----G-------GGG-----SSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred -----Hh-CCCCceEEEEcCCCC-CCc-----c-------hhh-----hHHHHHHHHHHhcCCCcEEEEECCCc
Confidence 11 246899999998643 111 0 000 12468899999999999999987763
No 193
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.22 E-value=1.5e-11 Score=108.61 Aligned_cols=111 Identities=13% Similarity=0.048 Sum_probs=82.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
+.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++ ...++++.+|+....
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~~~---------------- 104 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN----APHADVYEWNGKGEL---------------- 104 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH----CTTSEEEECCSCSSC----------------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh----CCCceEEEcchhhcc----------------
Confidence 467889999999999999999987 56999999999999999988 224889999985322
Q ss_pred cccC-CCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHH
Q psy15212 210 RFYK-NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAI 288 (329)
Q Consensus 210 ~~~~-~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~ 288 (329)
+ +. ++.||+|++.+. +..+|+++.++|||||+++..... .+.+.+.
T Consensus 105 ~-~~~~~~fD~v~~~~~----------------------------~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~ 151 (226)
T 3m33_A 105 P-AGLGAPFGLIVSRRG----------------------------PTSVILRLPELAAPDAHFLYVGPR----LNVPEVP 151 (226)
T ss_dssp C-TTCCCCEEEEEEESC----------------------------CSGGGGGHHHHEEEEEEEEEEESS----SCCTHHH
T ss_pred C-CcCCCCEEEEEeCCC----------------------------HHHHHHHHHHHcCCCcEEEEeCCc----CCHHHHH
Confidence 1 23 578999997521 124578888999999999933222 2333455
Q ss_pred HHHhhC
Q psy15212 289 IFSKNH 294 (329)
Q Consensus 289 ~~l~~~ 294 (329)
..+.+.
T Consensus 152 ~~l~~~ 157 (226)
T 3m33_A 152 ERLAAV 157 (226)
T ss_dssp HHHHHT
T ss_pred HHHHHC
Confidence 566654
No 194
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.22 E-value=1.3e-10 Score=111.32 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=79.1
Q ss_pred CcccccceEEEechhH---HHHh---hhcCCCCCCeEEeecCCCchHHHHHHHhCC------------------------
Q psy15212 106 IPKFFNGFCSIQDAAA---QLAA---PLLDIRSGMYVLDACSAPGGKTCHLLEIAD------------------------ 155 (329)
Q Consensus 106 ~~~~~~G~~~~Qd~~s---~l~~---~~l~~~~g~~VLDlcag~G~kt~~la~~~~------------------------ 155 (329)
.+.++.|+-..|..+. .+++ .+....++..|||+|||+|++++.+|....
T Consensus 162 ~~LhkRgyr~~~~~Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~ 241 (384)
T 3ldg_A 162 PSLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVT 241 (384)
T ss_dssp SCTTCCSCCCC---CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHH
T ss_pred CcccccCcccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHH
Confidence 3556677655443331 2333 344567899999999999999998886432
Q ss_pred ---------------CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccccccccCCCCCC
Q psy15212 156 ---------------IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFD 218 (329)
Q Consensus 156 ---------------~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD 218 (329)
.+|+|+|+|+.+++.+++|++..|+. +++.++|+.++. ....||
T Consensus 242 ~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~-------------------~~~~fD 302 (384)
T 3ldg_A 242 RVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFK-------------------TNKING 302 (384)
T ss_dssp HHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCC-------------------CCCCSC
T ss_pred HHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCC-------------------ccCCcC
Confidence 35999999999999999999999995 899999998865 235899
Q ss_pred EEEEccCCc
Q psy15212 219 RILADLPCT 227 (329)
Q Consensus 219 ~Vl~D~PCs 227 (329)
.|++|||+.
T Consensus 303 ~Iv~NPPYG 311 (384)
T 3ldg_A 303 VLISNPPYG 311 (384)
T ss_dssp EEEECCCCT
T ss_pred EEEECCchh
Confidence 999999985
No 195
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.22 E-value=3.5e-11 Score=113.68 Aligned_cols=113 Identities=15% Similarity=0.079 Sum_probs=87.9
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
.+...++.+|||+|||+|..+..+++....+|+|+|+++ +++.++++++.+|+. ++++.+|+....
T Consensus 45 ~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~----------- 112 (348)
T 2y1w_A 45 NHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS----------- 112 (348)
T ss_dssp TGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-----------
T ss_pred ccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC-----------
Confidence 344568899999999999999999986336999999996 889999999999984 899999988764
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
..++||+|+++++..... .+. ..+.+..+.++|||||.++.+++++.
T Consensus 113 --------~~~~~D~Ivs~~~~~~~~-------------~~~-------~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (348)
T 2y1w_A 113 --------LPEQVDIIISEPMGYMLF-------------NER-------MLESYLHAKKYLKPSGNMFPTIGDVH 159 (348)
T ss_dssp --------CSSCEEEEEECCCBTTBT-------------TTS-------HHHHHHHGGGGEEEEEEEESCEEEEE
T ss_pred --------CCCceeEEEEeCchhcCC-------------hHH-------HHHHHHHHHhhcCCCeEEEEecCcEE
Confidence 235799999887633111 011 23456778899999999997776654
No 196
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.21 E-value=4.5e-11 Score=105.86 Aligned_cols=111 Identities=18% Similarity=0.226 Sum_probs=85.1
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhc
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDIN 202 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~ 202 (329)
.+..++...++.+|||+|||+|..+..+++....+|+++|+++.+++.++++.... .++++.+|+...+
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~d~~~~~--------- 102 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDT--GITYERADLDKLH--------- 102 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSS--SEEEEECCGGGCC---------
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccC--CceEEEcChhhcc---------
Confidence 34455666788999999999999999999863249999999999999998876542 3788889987754
Q ss_pred ccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 203 KKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 203 ~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
+..+.||+|++... +...++ ...+|+.+.++|+|||++++++
T Consensus 103 ---------~~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 103 ---------LPQDSFDLAYSSLA------LHYVED----------------VARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp ---------CCTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------CCCCCceEEEEecc------ccccch----------------HHHHHHHHHHhcCcCcEEEEEe
Confidence 24578999997432 211111 2468999999999999999986
No 197
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.21 E-value=5.5e-11 Score=102.80 Aligned_cols=114 Identities=12% Similarity=0.148 Sum_probs=82.5
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.+.++.+|||+|||+|..+..+++....+|+|+|+++.+++.+++|+. .++++.+|+..++
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~~--------------- 108 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEIS--------------- 108 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGCC---------------
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHHCC---------------
Confidence 456788999999999999999998622589999999999999999876 5788999987643
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHH
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAI 288 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~ 288 (329)
+.||.|++|||..... . ....++++.+.+.+ |+ +|+.|. + .....+.
T Consensus 109 ------~~~D~v~~~~p~~~~~-------------~-------~~~~~~l~~~~~~~--g~--~~~~~~--~-~~~~~~~ 155 (200)
T 1ne2_A 109 ------GKYDTWIMNPPFGSVV-------------K-------HSDRAFIDKAFETS--MW--IYSIGN--A-KARDFLR 155 (200)
T ss_dssp ------CCEEEEEECCCC---------------------------CHHHHHHHHHHE--EE--EEEEEE--G-GGHHHHH
T ss_pred ------CCeeEEEECCCchhcc-------------C-------chhHHHHHHHHHhc--Cc--EEEEEc--C-chHHHHH
Confidence 5799999999965210 0 01235678888877 33 666663 2 3445556
Q ss_pred HHHhhC
Q psy15212 289 IFSKNH 294 (329)
Q Consensus 289 ~~l~~~ 294 (329)
..+...
T Consensus 156 ~~~~~~ 161 (200)
T 1ne2_A 156 REFSAR 161 (200)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 666554
No 198
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.21 E-value=3.9e-11 Score=111.94 Aligned_cols=113 Identities=20% Similarity=0.199 Sum_probs=83.5
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHc--CC---ceEEEecCccccchhhhhhhhccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRL--NL---KATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~--g~---~v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
..+.+|||+|||+|+.+..+++..+ .+|+++|+++.+++.+++++... ++ +++++.+|+....
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l----------- 175 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFL----------- 175 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHH-----------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHH-----------
Confidence 3457999999999999999998755 79999999999999999998764 33 3899999987642
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
. ...++||+|++|++.. .+ |. ..+ ...++++.+.+.|+|||.++..+.+.
T Consensus 176 -----~-~~~~~fD~Ii~d~~~~-~~-----~~----------~~l--~t~~~l~~~~~~LkpgG~lv~~~~~~ 225 (314)
T 2b2c_A 176 -----K-NHKNEFDVIITDSSDP-VG-----PA----------ESL--FGQSYYELLRDALKEDGILSSQGESV 225 (314)
T ss_dssp -----H-HCTTCEEEEEECCC-------------------------------HHHHHHHHEEEEEEEEEECCCT
T ss_pred -----H-hcCCCceEEEEcCCCC-CC-----cc----------hhh--hHHHHHHHHHhhcCCCeEEEEECCCc
Confidence 1 1346899999998632 10 00 000 12578999999999999999987554
No 199
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.20 E-value=1.3e-11 Score=106.35 Aligned_cols=108 Identities=9% Similarity=0.021 Sum_probs=82.1
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
.+.++|||+|||+|..++.++...+ .+++|+|+|+.+++.+++|+.+.|+...+...|.....
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~---------------- 111 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDV---------------- 111 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHH----------------
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccC----------------
Confidence 4467999999999999999987766 79999999999999999999999987544446654322
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE-cCCCC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV-TCSLW 279 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys-TCS~~ 279 (329)
..+.||+|+.- .+.++.+.+...+.+.++.|+|||.+|-. |-|+.
T Consensus 112 ---~~~~~DvVLa~----------------------k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~ 157 (200)
T 3fzg_A 112 ---YKGTYDVVFLL----------------------KMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLS 157 (200)
T ss_dssp ---TTSEEEEEEEE----------------------TCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC
T ss_pred ---CCCCcChhhHh----------------------hHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhc
Confidence 45789999941 13333355556677899999999977633 34544
No 200
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.20 E-value=3e-11 Score=111.22 Aligned_cols=117 Identities=15% Similarity=0.202 Sum_probs=81.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCC------------------------------
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNL------------------------------ 180 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~------------------------------ 180 (329)
++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+++++...+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 688999999999999999999876 7999999999999999999876541
Q ss_pred -----------------------------ceEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccc
Q psy15212 181 -----------------------------KATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGV 231 (329)
Q Consensus 181 -----------------------------~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~ 231 (329)
.++++.+|+..... .+ .....+.||+|++...
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~-~~------------~~~~~~~fD~I~~~~v------ 186 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRD-DL------------VEAQTPEYDVVLCLSL------ 186 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSH-HH------------HTTCCCCEEEEEEESC------
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCcc-cc------------ccccCCCcCEEEEChH------
Confidence 26777777654320 00 0013578999996321
Q ss_pred cccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 232 VRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 232 ~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+ .|. .+..-.....++++.+.++|+|||+|+..+..
T Consensus 187 l------~~i----hl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 187 T------KWV----HLNWGDEGLKRMFRRIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp H------HHH----HHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred H------HHh----hhcCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 0 010 11112234567999999999999999987543
No 201
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.20 E-value=2.7e-11 Score=108.15 Aligned_cols=134 Identities=14% Similarity=0.066 Sum_probs=96.3
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.+...++.+|||+|||+|..+..+++....+|+++|+++.+++.+++++... -.++++.+|+...+
T Consensus 88 ~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~------------- 153 (254)
T 1xtp_A 88 SLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETAT------------- 153 (254)
T ss_dssp TSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCC-------------
T ss_pred hhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCC-------------
Confidence 3345678899999999999999998875568999999999999999988765 33788999987754
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCc------
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF------ 280 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~------ 280 (329)
+..+.||+|++.. ++.+- ... ....+|+.+.++|||||++++++.....
T Consensus 154 -----~~~~~fD~v~~~~------~l~~~-------~~~-------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~ 208 (254)
T 1xtp_A 154 -----LPPNTYDLIVIQW------TAIYL-------TDA-------DFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVD 208 (254)
T ss_dssp -----CCSSCEEEEEEES------CGGGS-------CHH-------HHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEE
T ss_pred -----CCCCCeEEEEEcc------hhhhC-------CHH-------HHHHHHHHHHHhcCCCeEEEEEecCCCcccceec
Confidence 2457899999632 22111 111 2456899999999999999998742211
Q ss_pred ------cccHHHHHHHHhhCCCcEEe
Q psy15212 281 ------EESEEQAIIFSKNHKDSIRL 300 (329)
Q Consensus 281 ------~Ene~vv~~~l~~~~~~~~~ 300 (329)
.-..+.+..++++. +|+.+
T Consensus 209 ~~~~~~~~~~~~~~~~l~~a-Gf~~~ 233 (254)
T 1xtp_A 209 KEDSSLTRSDIHYKRLFNES-GVRVV 233 (254)
T ss_dssp TTTTEEEBCHHHHHHHHHHH-TCCEE
T ss_pred ccCCcccCCHHHHHHHHHHC-CCEEE
Confidence 12345666677665 55544
No 202
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.20 E-value=8.2e-12 Score=117.07 Aligned_cols=112 Identities=19% Similarity=0.156 Sum_probs=87.1
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
...++.+|||+|||+|..+..+++....+|+|+|++ .+++.++++++.+|+. ++++.+|+.+..
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------------- 100 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH------------- 100 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC-------------
T ss_pred hhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc-------------
Confidence 345788999999999999999998633699999999 6999999999999985 899999998765
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
.+.++||+|+++++..... .... ...+|..+.++|||||+++.+++++
T Consensus 101 -----~~~~~~D~Ivs~~~~~~l~------------~~~~-------~~~~l~~~~~~LkpgG~li~~~~~~ 148 (328)
T 1g6q_1 101 -----LPFPKVDIIISEWMGYFLL------------YESM-------MDTVLYARDHYLVEGGLIFPDKCSI 148 (328)
T ss_dssp -----CSSSCEEEEEECCCBTTBS------------TTCC-------HHHHHHHHHHHEEEEEEEESCEEEE
T ss_pred -----CCCCcccEEEEeCchhhcc------------cHHH-------HHHHHHHHHhhcCCCeEEEEeeceE
Confidence 2347899999987643210 0011 2356788889999999998665553
No 203
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.20 E-value=3.6e-11 Score=113.52 Aligned_cols=137 Identities=17% Similarity=0.195 Sum_probs=95.5
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcC---C------ceEEEecCccccchhhhhhhhc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLN---L------KATLILSDISKINLKKLYIDIN 202 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g---~------~v~~~~~D~~~~~~~~~~~~~~ 202 (329)
.+.+|||+|+|.|+.+..+++....+|+++|+++..++.+++++...+ + .++++.+|+..+. +...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L-~~~~---- 262 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVL-KRYA---- 262 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHH-HHHH----
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHH-Hhhh----
Confidence 467999999999999999987655799999999999999999976432 1 3789999998764 1000
Q ss_pred ccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccc
Q psy15212 203 KKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEE 282 (329)
Q Consensus 203 ~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~E 282 (329)
...++||+|++|+|-...|. .| ..+ .-.+....+++.+.+.|+|||.++.-+||.+..|
T Consensus 263 ---------~~~~~fDvII~D~~d~P~~~---~p--------~~L-~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e 321 (364)
T 2qfm_A 263 ---------KEGREFDYVINDLTAVPIST---SP--------EED-STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTE 321 (364)
T ss_dssp ---------HHTCCEEEEEEECCSSCCCC---C-------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHH
T ss_pred ---------ccCCCceEEEECCCCcccCc---Cc--------hhh-hHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHH
Confidence 02468999999997521111 11 111 1123445566777999999999999999988755
Q ss_pred cHHHHHHHHhhC
Q psy15212 283 SEEQAIIFSKNH 294 (329)
Q Consensus 283 ne~vv~~~l~~~ 294 (329)
--...+..++++
T Consensus 322 ~~~~~~~~l~~~ 333 (364)
T 2qfm_A 322 ALSLYEEQLGRL 333 (364)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHHHh
Confidence 555555544443
No 204
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.20 E-value=2.2e-10 Score=109.99 Aligned_cols=116 Identities=14% Similarity=0.172 Sum_probs=86.0
Q ss_pred hhcCCCCCCeEEeecCCCchHHHHHHHhCC---------------------------------------CEEEEEeCChh
Q psy15212 126 PLLDIRSGMYVLDACSAPGGKTCHLLEIAD---------------------------------------IKLISVDNNLS 166 (329)
Q Consensus 126 ~~l~~~~g~~VLDlcag~G~kt~~la~~~~---------------------------------------~~v~avD~~~~ 166 (329)
.+....++..|||+|||+|++++.+|.... .+|+|+|+|+.
T Consensus 195 ~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ 274 (393)
T 3k0b_A 195 LLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDAR 274 (393)
T ss_dssp HHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHH
Confidence 445677889999999999999998886532 35999999999
Q ss_pred HHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCCh
Q psy15212 167 RLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRK 244 (329)
Q Consensus 167 rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~ 244 (329)
+++.+++|++..|+. +++.++|+.+.. ....||+|++|||+.- ..
T Consensus 275 al~~Ar~Na~~~gl~~~I~~~~~D~~~~~-------------------~~~~fD~Iv~NPPYg~--------------rl 321 (393)
T 3k0b_A 275 LIEIAKQNAVEAGLGDLITFRQLQVADFQ-------------------TEDEYGVVVANPPYGE--------------RL 321 (393)
T ss_dssp HHHHHHHHHHHTTCTTCSEEEECCGGGCC-------------------CCCCSCEEEECCCCCC--------------SH
T ss_pred HHHHHHHHHHHcCCCCceEEEECChHhCC-------------------CCCCCCEEEECCCCcc--------------cc
Confidence 999999999999985 899999998865 2358999999999741 11
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 245 NDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 245 ~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.+...+..+...+-+ .++. -+||.++..|.
T Consensus 322 ~~~~~l~~ly~~lg~-~lk~-~~g~~~~iit~ 351 (393)
T 3k0b_A 322 EDEEAVRQLYREMGI-VYKR-MPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHHHHHHHHHH-HHHT-CTTCEEEEEEC
T ss_pred CCchhHHHHHHHHHH-HHhc-CCCCEEEEEEC
Confidence 222334444444333 3333 36888877654
No 205
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.20 E-value=6.7e-11 Score=105.99 Aligned_cols=104 Identities=19% Similarity=0.226 Sum_probs=82.1
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC-ceEEEecCccccchhhhhhhhcccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL-KATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~-~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
.+.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.+++++ ..+. .++++.+|+...+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~-------------- 99 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIP-------------- 99 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCC--------------
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCC--------------
Confidence 4677899999999999999999976 569999999999999999998 3333 3899999987754
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
+.++.||+|++... +...++ ...+|+.+.++|||||+++.+
T Consensus 100 ----~~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 100 ----LPDESVHGVIVVHL------WHLVPD----------------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ----SCTTCEEEEEEESC------GGGCTT----------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ----CCCCCeeEEEECCc------hhhcCC----------------HHHHHHHHHHHCCCCcEEEEE
Confidence 34578999997432 211111 246789999999999999877
No 206
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.19 E-value=4.6e-11 Score=105.75 Aligned_cols=102 Identities=22% Similarity=0.259 Sum_probs=80.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
..++.+|||+|||+|..+..+++... +|+|+|+|+.+++.++++... .++++.+|+....
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~~---------------- 99 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD---GITYIHSRFEDAQ---------------- 99 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGCC----------------
T ss_pred hcCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHcC----------------
Confidence 35678999999999999999997654 899999999999999988654 5788889987653
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHH-hcCCCCCEEEEEcC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLW-KMLKPGGKLLFVTC 276 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~-~~LkpgG~lvysTC 276 (329)
.++.||+|++. +++.+-++ ...+|+++. ++|||||+++.++.
T Consensus 100 ---~~~~fD~v~~~------~~l~~~~~----------------~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 100 ---LPRRYDNIVLT------HVLEHIDD----------------PVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp ---CSSCEEEEEEE------SCGGGCSS----------------HHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ---cCCcccEEEEh------hHHHhhcC----------------HHHHHHHHHHHhcCCCCEEEEEcC
Confidence 35789999963 23332222 246899999 99999999999874
No 207
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.18 E-value=2.3e-10 Score=99.88 Aligned_cols=105 Identities=21% Similarity=0.244 Sum_probs=78.3
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++ ..+.+...|+..+...
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~------------- 109 (227)
T 3e8s_A 49 LGRQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEA------------- 109 (227)
T ss_dssp HHTCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTT-------------
T ss_pred hcCCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh-----cccccchhhHHhhccc-------------
Confidence 3456789999999999999999986 56999999999999999887 2356777777665200
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
......+||+|++..... +++ ...+|+.+.++|||||++++++-
T Consensus 110 -~~~~~~~fD~v~~~~~l~-------~~~----------------~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 110 -KVPVGKDYDLICANFALL-------HQD----------------IIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp -CSCCCCCEEEEEEESCCC-------SSC----------------CHHHHHHHHHTEEEEEEEEEEEC
T ss_pred -ccccCCCccEEEECchhh-------hhh----------------HHHHHHHHHHHhCCCeEEEEEec
Confidence 112345699999754321 111 23579999999999999999874
No 208
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.18 E-value=1.1e-10 Score=104.74 Aligned_cols=159 Identities=18% Similarity=0.083 Sum_probs=103.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC-----------------------------
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL----------------------------- 180 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~----------------------------- 180 (329)
..+|.+|||+|||+|..+..++.....+|+++|+|+.+++.+++++...+.
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 356789999999999999888865335999999999999999998876541
Q ss_pred -ce-EEEecCccccchhhhhhhhcccccccccccCC---CCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHH
Q psy15212 181 -KA-TLILSDISKINLKKLYIDINKKTNNRFRFYKN---KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSC 255 (329)
Q Consensus 181 -~v-~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~---~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~ 255 (329)
.+ +++.+|+.... . ... +.||+|++.- ++.. +........
T Consensus 134 ~~v~~~~~~d~~~~~----------------~-~~~~~~~~fD~v~~~~------~l~~------------~~~~~~~~~ 178 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQ----------------P-LGGVSLPPADCLLSTL------CLDA------------ACPDLPAYR 178 (265)
T ss_dssp HHEEEEEECCTTSSS----------------T-TTTCCCCCEEEEEEES------CHHH------------HCSSHHHHH
T ss_pred hhheeEEEeeeccCC----------------C-CCccccCCccEEEEhh------hhhh------------hcCChHHHH
Confidence 15 78888987753 1 122 6899999632 1110 000112346
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCC------------CccccHHHHHHHHhhCCCcEEecCC---CcccCCCCCCCCCCeEE
Q psy15212 256 KILNNLWKMLKPGGKLLFVTCSL------------WFEESEEQAIIFSKNHKDSIRLNSP---GQLLPTVNKKQDYDGFF 320 (329)
Q Consensus 256 ~lL~~a~~~LkpgG~lvysTCS~------------~~~Ene~vv~~~l~~~~~~~~~~~~---~~~~p~~~~~~~~~gff 320 (329)
.+|+++.++|||||+|++++..- ...-+++.+...+++. +|+.+... ...-+.. ...+++|
T Consensus 179 ~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~~~~~~~~~~~~~~~~---~~~~~~~ 254 (265)
T 2i62_A 179 TALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEA-GYTIEQFEVISQNYSSTT---SNNEGLF 254 (265)
T ss_dssp HHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHT-TCEEEEEEEECCCCCTTT---BCCCCEE
T ss_pred HHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHC-CCEEEEEEEecccCCccc---cccceEE
Confidence 78999999999999999876321 1112455667777765 66655431 1111111 2445666
Q ss_pred EEEEEec
Q psy15212 321 YSLFQKR 327 (329)
Q Consensus 321 ~a~l~k~ 327 (329)
+..-+|.
T Consensus 255 ~~~a~K~ 261 (265)
T 2i62_A 255 SLVGRKP 261 (265)
T ss_dssp EEEEECC
T ss_pred EEEeccc
Confidence 6666664
No 209
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.17 E-value=1.8e-10 Score=111.73 Aligned_cols=112 Identities=14% Similarity=0.061 Sum_probs=83.3
Q ss_pred hhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHH-------HHHHHHcC--Cc-eEEEecCccccch
Q psy15212 126 PLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMI-------SENLKRLN--LK-ATLILSDISKINL 194 (329)
Q Consensus 126 ~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l-------~~n~~~~g--~~-v~~~~~D~~~~~~ 194 (329)
..+.+.+|++|||+|||+|..+..+|+..+ .+|+|+|+++.+++.+ +++++..| +. ++++.+|......
T Consensus 236 ~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 236 QQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNN 315 (433)
T ss_dssp HHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCH
T ss_pred HhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccc
Confidence 445778999999999999999999999766 6899999999999888 99999988 43 7888876542110
Q ss_pred hhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 195 KKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
.+ . ...+.||+|+++..+. . .+ ....|+.+.+.|||||+||.+
T Consensus 316 -~~------------~-~~~~~FDvIvvn~~l~---------------~-~d-------~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 316 -RV------------A-ELIPQCDVILVNNFLF---------------D-ED-------LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp -HH------------H-HHGGGCSEEEECCTTC---------------C-HH-------HHHHHHHHHTTCCTTCEEEES
T ss_pred -cc------------c-cccCCCCEEEEeCccc---------------c-cc-------HHHHHHHHHHhCCCCeEEEEe
Confidence 00 0 0125799999864321 0 11 224578889999999999876
No 210
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.17 E-value=7.1e-11 Score=111.08 Aligned_cols=115 Identities=15% Similarity=0.188 Sum_probs=86.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHc--CC---ceEEEecCccccchhhhhhhhcc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRL--NL---KATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~--g~---~v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
...+.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++++.+. |+ .++++.+|+....
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l---------- 187 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFL---------- 187 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHH----------
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHH----------
Confidence 34567999999999999999998755 69999999999999999998764 33 3899999987642
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
.....++||+|++|++... +. ... ....++++.+.++|+|||.|+..+.+.
T Consensus 188 ------~~~~~~~fDlIi~d~~~p~-~~------------~~~-----l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 188 ------KNAAEGSYDAVIVDSSDPI-GP------------AKE-----LFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp ------HTSCTTCEEEEEECCCCTT-SG------------GGG-----GGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred ------HhccCCCccEEEECCCCcc-Cc------------chh-----hhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 1112468999999986210 00 000 013568999999999999999975553
No 211
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.17 E-value=5.4e-11 Score=117.16 Aligned_cols=110 Identities=15% Similarity=0.099 Sum_probs=85.2
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
...++.+|||+|||+|..+..+++....+|+|+|+++ +++.++++++.+|+. ++++.+|+.+..
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~------------- 220 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS------------- 220 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-------------
T ss_pred hhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc-------------
Confidence 4457889999999999999999885336999999998 999999999999984 899999998754
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
..++||+|+++++-... ..+ ...+.+..+.++|||||+++.+.+++
T Consensus 221 ------~~~~fD~Ivs~~~~~~~-------------~~e-------~~~~~l~~~~~~LkpgG~li~~~~~~ 266 (480)
T 3b3j_A 221 ------LPEQVDIIISEPMGYML-------------FNE-------RMLESYLHAKKYLKPSGNMFPTIGDV 266 (480)
T ss_dssp ------CSSCEEEEECCCCHHHH-------------TCH-------HHHHHHHHGGGGEEEEEEEESCEEEE
T ss_pred ------cCCCeEEEEEeCchHhc-------------CcH-------HHHHHHHHHHHhcCCCCEEEEEecee
Confidence 13589999988761100 001 12345668889999999999665543
No 212
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.16 E-value=1.5e-11 Score=112.77 Aligned_cols=109 Identities=12% Similarity=0.068 Sum_probs=74.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHH---HHcCCceEEE--ecCccccchhhhhhhhccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENL---KRLNLKATLI--LSDISKINLKKLYIDINKK 204 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~---~~~g~~v~~~--~~D~~~~~~~~~~~~~~~~ 204 (329)
+++|.+|||+|||||+.+..++++ ++|+|+|+++ ++..++++. +..+..+.++ .+|+..++
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~----------- 145 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME----------- 145 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-----------
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-----------
Confidence 568999999999999999999987 5999999998 432222110 1112246778 88887643
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCC--EEEEEcCC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG--KLLFVTCS 277 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG--~lvysTCS 277 (329)
++.||.|++|.. ..+|. ....... +..+|+.+.++||||| .++..+.+
T Consensus 146 ---------~~~fD~Vvsd~~-~~~~~-------------~~~d~~~--~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 ---------PFQADTVLCDIG-ESNPT-------------AAVEASR--TLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp ---------CCCCSEEEECCC-CCCSC-------------HHHHHHH--HHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred ---------CCCcCEEEECCC-cCCCc-------------hhhhHHH--HHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 468999999976 32221 0111111 1237888999999999 99876543
No 213
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.16 E-value=6.6e-11 Score=110.30 Aligned_cols=115 Identities=19% Similarity=0.245 Sum_probs=85.2
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHc--C----CceEEEecCccccchhhhhhhhcc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRL--N----LKATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~--g----~~v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
..+.+|||+|||+|+.+..+++..+ .+|+++|+++.+++.+++++... + -.++++.+|+....
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l---------- 145 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYL---------- 145 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHH----------
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHH----------
Confidence 3457999999999999999998754 69999999999999999998752 2 23899999988742
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
. ...++||+|++|++... + . ..|. ..+ ...++++.+.+.|+|||.++..+.+
T Consensus 146 ------~-~~~~~fD~Ii~d~~~~~-~-~-~~~~-------~~l-----~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 146 ------E-RTEERYDVVIIDLTDPV-G-E-DNPA-------RLL-----YTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp ------H-HCCCCEEEEEEECCCCB-S-T-TCGG-------GGG-----SSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ------H-hcCCCccEEEECCCCcc-c-c-cCcc-------hhc-----cHHHHHHHHHHhcCCCcEEEEEccC
Confidence 1 12468999999987531 0 0 0000 000 0246789999999999999987644
No 214
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.16 E-value=1e-10 Score=106.48 Aligned_cols=108 Identities=16% Similarity=0.283 Sum_probs=83.7
Q ss_pred HhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcc
Q psy15212 124 AAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 124 ~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
+...+.+.++.+|||+|||+|..+..+++ .+.+|+|+|+|+.+++.++++. -.++++.+|+..++
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~---------- 113 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY----PHLHFDVADARNFR---------- 113 (279)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCC----------
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhhCC----------
Confidence 34455677899999999999999999998 4479999999999999998875 23678889988765
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+ ++.||+|++... +..-++ ...+|+++.+.|||||++++++..
T Consensus 114 --------~-~~~fD~v~~~~~------l~~~~d----------------~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 114 --------V-DKPLDAVFSNAM------LHWVKE----------------PEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp --------C-SSCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------c-CCCcCEEEEcch------hhhCcC----------------HHHHHHHHHHhcCCCcEEEEEecC
Confidence 2 468999996432 111111 235789999999999999987654
No 215
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.16 E-value=1.3e-11 Score=112.37 Aligned_cols=128 Identities=15% Similarity=0.054 Sum_probs=82.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHH---HHHcCCceEEE--ecCccccchhhhhhhhccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISEN---LKRLNLKATLI--LSDISKINLKKLYIDINKK 204 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n---~~~~g~~v~~~--~~D~~~~~~~~~~~~~~~~ 204 (329)
+++|.+|||+|||||+.+..+++. ++|+|+|+++ ++..++++ .+.++..+.++ .+|+..++
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~----------- 137 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP----------- 137 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-----------
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC-----------
Confidence 578999999999999999999987 5999999998 43222111 01122246777 88887653
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCC--EEEEEcCCCCccc
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG--KLLFVTCSLWFEE 282 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG--~lvysTCS~~~~E 282 (329)
++.||+|++|.. ..+|. ....... +..+|+.+.++||||| .++..+-. .+
T Consensus 138 ---------~~~fD~V~sd~~-~~~~~-------------~~~d~~~--~l~~L~~~~r~LkpGG~~~fv~kv~~---~~ 189 (265)
T 2oxt_A 138 ---------VERTDVIMCDVG-ESSPK-------------WSVESER--TIKILELLEKWKVKNPSADFVVKVLC---PY 189 (265)
T ss_dssp ---------CCCCSEEEECCC-CCCSC-------------HHHHHHH--HHHHHHHHHHHHHHCTTCEEEEEESC---TT
T ss_pred ---------CCCCcEEEEeCc-ccCCc-------------cchhHHH--HHHHHHHHHHHhccCCCeEEEEEeCC---CC
Confidence 468999999976 32221 0111111 1227888999999999 99876533 33
Q ss_pred cH---HHHHHHHhhCCCcEE
Q psy15212 283 SE---EQAIIFSKNHKDSIR 299 (329)
Q Consensus 283 ne---~vv~~~l~~~~~~~~ 299 (329)
.. +.+..+...+..+..
T Consensus 190 ~~~~~~~l~~l~~~f~~v~~ 209 (265)
T 2oxt_A 190 SVEVMERLSVMQRKWGGGLV 209 (265)
T ss_dssp SHHHHHHHHHHHHHHCCEEE
T ss_pred ChhHHHHHHHHHHHcCCEEE
Confidence 44 444554444444433
No 216
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.14 E-value=1.4e-10 Score=103.06 Aligned_cols=104 Identities=17% Similarity=0.172 Sum_probs=79.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
..++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.++++ ++++.+|+....
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~~---------------- 94 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK-------FNVVKSDAIEYL---------------- 94 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT-------SEEECSCHHHHH----------------
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh-------cceeeccHHHHh----------------
Confidence 567889999999999999999987 55899999999999988877 677888877642
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
..+.+++||+|++. +++.+-++ .+ ...+|+.+.++|||||++++++..
T Consensus 95 ~~~~~~~fD~i~~~------~~l~~~~~-------~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 95 KSLPDKYLDGVMIS------HFVEHLDP-------ER-------LFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp HTSCTTCBSEEEEE------SCGGGSCG-------GG-------HHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred hhcCCCCeeEEEEC------CchhhCCc-------HH-------HHHHHHHHHHHcCCCcEEEEEeCC
Confidence 01345789999963 33322221 11 246899999999999999998754
No 217
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.14 E-value=1.1e-10 Score=105.34 Aligned_cols=109 Identities=13% Similarity=0.246 Sum_probs=83.3
Q ss_pred HHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhh
Q psy15212 122 QLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDI 201 (329)
Q Consensus 122 ~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~ 201 (329)
..+...+.+.++.+|||+|||+|..+..+++ .+.+|+|+|+|+.+++.++++. .++++.+|+..++
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~~~~~-------- 89 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVHP-----QVEWFTGYAENLA-------- 89 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCCT-----TEEEECCCTTSCC--------
T ss_pred HHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhcc-----CCEEEECchhhCC--------
Confidence 3444555677889999999999999999997 3479999999999988766554 5789999998765
Q ss_pred cccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 202 NKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 202 ~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+.++.||.|++... +.+-++ ...+|+++.+.|| ||++++.++.
T Consensus 90 ----------~~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 90 ----------LPDKSVDGVISILA------IHHFSH----------------LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp ----------SCTTCBSEEEEESC------GGGCSS----------------HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred ----------CCCCCEeEEEEcch------HhhccC----------------HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 34578999996432 111111 3468999999999 9988888765
No 218
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.14 E-value=1.9e-10 Score=105.16 Aligned_cols=125 Identities=18% Similarity=0.138 Sum_probs=88.4
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-----eEEEecCccccchhhh
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-----ATLILSDISKINLKKL 197 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-----v~~~~~D~~~~~~~~~ 197 (329)
.+...+...++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.++++....+.. +.+..+|+..++.
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--- 123 (293)
T 3thr_A 48 WLLGLLRQHGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK--- 123 (293)
T ss_dssp HHHHHHHHTTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH---
T ss_pred HHHHHhcccCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc---
Confidence 3444455567889999999999999999986 459999999999999999988655432 5778888776430
Q ss_pred hhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 198 YIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
.++..++||+|++... ++.+-++.... .+ ....+|+++.++|||||+++.+++.
T Consensus 124 ------------~~~~~~~fD~V~~~g~-----~l~~~~~~~~~--~~-------~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 124 ------------DVPAGDGFDAVICLGN-----SFAHLPDSKGD--QS-------EHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp ------------HSCCTTCEEEEEECTT-----CGGGSCCSSSS--SH-------HHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ------------ccccCCCeEEEEEcCh-----HHhhcCccccC--HH-------HHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 1124578999996311 22222221111 11 2456899999999999999988653
No 219
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.14 E-value=8.1e-11 Score=112.20 Aligned_cols=110 Identities=19% Similarity=0.262 Sum_probs=84.6
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.+|.+|||+|||+|..+..+|+....+|+|+|.|+ +++.++++++.+|+. ++++.+|+..+.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--------------- 145 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE--------------- 145 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC---------------
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec---------------
Confidence 36889999999999999888875446999999986 889999999999986 899999998875
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
.+++||+|+++.- +.+.+. +.. ...++....++|||||.++-+.++++
T Consensus 146 ----lpe~~DvivsE~~--~~~l~~----------e~~-------l~~~l~a~~r~Lkp~G~~iP~~atly 193 (376)
T 4hc4_A 146 ----LPEQVDAIVSEWM--GYGLLH----------ESM-------LSSVLHARTKWLKEGGLLLPASAELF 193 (376)
T ss_dssp ----CSSCEEEEECCCC--BTTBTT----------TCS-------HHHHHHHHHHHEEEEEEEESCEEEEE
T ss_pred ----CCccccEEEeecc--cccccc----------cch-------hhhHHHHHHhhCCCCceECCccceEE
Confidence 2478999997542 222211 111 23456666789999999998777654
No 220
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.13 E-value=8.1e-11 Score=108.43 Aligned_cols=120 Identities=18% Similarity=0.203 Sum_probs=81.4
Q ss_pred cCCCCCCeEEeecC------CCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCceEE-EecCccccchhhhh
Q psy15212 128 LDIRSGMYVLDACS------APGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLKATL-ILSDISKINLKKLY 198 (329)
Q Consensus 128 l~~~~g~~VLDlca------g~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~v~~-~~~D~~~~~~~~~~ 198 (329)
+.+++|++|||+|| |||+ ..++++.+ ++|+|+|+++. + . .+++ +++|+..+.
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------~--~v~~~i~gD~~~~~----- 119 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------S--DADSTLIGDCATVH----- 119 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------C--SSSEEEESCGGGCC-----
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------C--CCEEEEECccccCC-----
Confidence 46788999999999 7788 55566665 79999999998 1 1 3667 999988754
Q ss_pred hhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 199 IDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
..++||+|++|+++...|....+.. +.. ....++|+.+.++|||||++++.+-.
T Consensus 120 --------------~~~~fD~Vvsn~~~~~~g~~~~d~~-----~~~------~l~~~~l~~a~r~LkpGG~~v~~~~~- 173 (290)
T 2xyq_A 120 --------------TANKWDLIISDMYDPRTKHVTKEND-----SKE------GFFTYLCGFIKQKLALGGSIAVKITE- 173 (290)
T ss_dssp --------------CSSCEEEEEECCCCCC---CCSCCC-----CCC------THHHHHHHHHHHHEEEEEEEEEEECS-
T ss_pred --------------ccCcccEEEEcCCcccccccccccc-----chH------HHHHHHHHHHHHhcCCCcEEEEEEec-
Confidence 1367999999988766665432211 000 12347899999999999999986432
Q ss_pred CccccHHHHHHHHhhC
Q psy15212 279 WFEESEEQAIIFSKNH 294 (329)
Q Consensus 279 ~~~Ene~vv~~~l~~~ 294 (329)
....+ .+.+.++.+
T Consensus 174 -~~~~~-~l~~~l~~~ 187 (290)
T 2xyq_A 174 -HSWNA-DLYKLMGHF 187 (290)
T ss_dssp -SSCCH-HHHHHHTTE
T ss_pred -cCCHH-HHHHHHHHc
Confidence 22333 445566654
No 221
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.12 E-value=5.1e-10 Score=102.36 Aligned_cols=160 Identities=17% Similarity=0.101 Sum_probs=95.6
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHc-----------------CC-------------
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRL-----------------NL------------- 180 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~-----------------g~------------- 180 (329)
.++.+|||+|||+|..+..++...+.+|+|+|+|+.+++.+++++++. |.
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 367899999999999444344333469999999999999998866431 10
Q ss_pred -ceEEEecCccc-cchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH---HHHHH
Q psy15212 181 -KATLILSDISK-INLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL---SKYSC 255 (329)
Q Consensus 181 -~v~~~~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l---~~~q~ 255 (329)
.++++.+|+.. .++. + ..+.+++||+|++.. + +..+ .....
T Consensus 150 ~~~~~~~~D~~~~~~~~----------~---~~~~~~~fD~V~~~~------~---------------l~~~~~~~~~~~ 195 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLG----------A---GSPAPLPADALVSAF------C---------------LEAVSPDLASFQ 195 (289)
T ss_dssp HEEEEECCCTTSSSTTC----------S---SCSSCSSEEEEEEES------C---------------HHHHCSSHHHHH
T ss_pred hhceEEecccCCCCCcc----------c---cccCCCCCCEEEehh------h---------------hhhhcCCHHHHH
Confidence 03566778776 2200 0 002345799999642 1 1111 22345
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCC------------CccccHHHHHHHHhhCCCcEEecCCCcc----cCCCCCCCCCCeE
Q psy15212 256 KILNNLWKMLKPGGKLLFVTCSL------------WFEESEEQAIIFSKNHKDSIRLNSPGQL----LPTVNKKQDYDGF 319 (329)
Q Consensus 256 ~lL~~a~~~LkpgG~lvysTCS~------------~~~Ene~vv~~~l~~~~~~~~~~~~~~~----~p~~~~~~~~~gf 319 (329)
.+|+++.++|||||+|+++...- ...-+.+.+...++.. +|+.+...... +... ....+++
T Consensus 196 ~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a-Gf~~~~~~~~~~~~~~~~~--~~~~~~~ 272 (289)
T 2g72_A 196 RALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRS-GYKVRDLRTYIMPAHLQTG--VDDVKGV 272 (289)
T ss_dssp HHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHT-TEEEEEEEEEECCGGGCCT--TBCCCEE
T ss_pred HHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHc-CCeEEEeeEeecccccccc--ccCcceE
Confidence 78999999999999999864210 0112455667777765 66654321111 1111 1356666
Q ss_pred EEEEEEec
Q psy15212 320 FYSLFQKR 327 (329)
Q Consensus 320 f~a~l~k~ 327 (329)
|+..-+|.
T Consensus 273 ~~~~~~~~ 280 (289)
T 2g72_A 273 FFAWAQKV 280 (289)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecc
Confidence 66555554
No 222
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.12 E-value=9e-10 Score=100.83 Aligned_cols=134 Identities=13% Similarity=0.077 Sum_probs=82.4
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHH-----HHcCC------ceEEEecCccccchhhh
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDN-NLSRLNMISENL-----KRLNL------KATLILSDISKINLKKL 197 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~-~~~rl~~l~~n~-----~~~g~------~v~~~~~D~~~~~~~~~ 197 (329)
..+|.+|||+|||+|..+..++.....+|+++|+ ++.+++.+++|+ +..++ .+++...|..+.. ..+
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~ 155 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSP-DSL 155 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCT-HHH
T ss_pred hcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCcc-HHH
Confidence 3578899999999999999888753359999999 899999999999 55554 2566655543321 000
Q ss_pred hhhhcccccccccccCCCCCCEEEE-ccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCC---C--CCEE
Q psy15212 198 YIDINKKTNNRFRFYKNKYFDRILA-DLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLK---P--GGKL 271 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~fD~Vl~-D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lk---p--gG~l 271 (329)
. .....+.||+|++ |+.+. ... ...+++.+.++|+ | ||++
T Consensus 156 ~-----------~~~~~~~fD~Ii~~dvl~~----------------~~~-------~~~ll~~l~~~Lk~~~p~~gG~l 201 (281)
T 3bzb_A 156 Q-----------RCTGLQRFQVVLLADLLSF----------------HQA-------HDALLRSVKMLLALPANDPTAVA 201 (281)
T ss_dssp H-----------HHHSCSSBSEEEEESCCSC----------------GGG-------HHHHHHHHHHHBCCTTTCTTCEE
T ss_pred H-----------hhccCCCCCEEEEeCcccC----------------hHH-------HHHHHHHHHHHhcccCCCCCCEE
Confidence 0 0002468999986 65432 111 3457888889999 9 9977
Q ss_pred EEEcCCCCc---cccHHHHHHHHhhCCC-cEEe
Q psy15212 272 LFVTCSLWF---EESEEQAIIFSKNHKD-SIRL 300 (329)
Q Consensus 272 vysTCS~~~---~Ene~vv~~~l~~~~~-~~~~ 300 (329)
+.+.+...+ +..+..++ .++++ + ++..
T Consensus 202 ~v~~~~~~~~~~~~~~~~~~-~l~~~-G~f~v~ 232 (281)
T 3bzb_A 202 LVTFTHHRPHLAERDLAFFR-LVNAD-GALIAE 232 (281)
T ss_dssp EEEECC--------CTHHHH-HHHHS-TTEEEE
T ss_pred EEEEEeeecccchhHHHHHH-HHHhc-CCEEEE
Confidence 665443222 22333443 44554 5 5544
No 223
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.12 E-value=1.1e-10 Score=105.13 Aligned_cols=101 Identities=18% Similarity=0.219 Sum_probs=78.6
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRF 211 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.++++.. + .++.+|+..++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~--~---~~~~~d~~~~~------------------ 109 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV--K---NVVEAKAEDLP------------------ 109 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC--S---CEEECCTTSCC------------------
T ss_pred CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC--C---CEEECcHHHCC------------------
Confidence 7889999999999999999976 5699999999999999988764 1 27788887754
Q ss_pred cCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 212 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 212 ~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+.++.||.|++.... .++......+|+++.++|||||+++.++.+
T Consensus 110 ~~~~~fD~v~~~~~~---------------------~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 110 FPSGAFEAVLALGDV---------------------LSYVENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp SCTTCEEEEEECSSH---------------------HHHCSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCCCCEEEEEEcchh---------------------hhccccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 245789999964321 111111456899999999999999988765
No 224
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.11 E-value=1.2e-10 Score=105.66 Aligned_cols=101 Identities=17% Similarity=0.223 Sum_probs=77.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRF 211 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
.+.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.+++ .-.++++++|+.+++
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~-~~v~gvD~s~~ml~~a~~-----~~~v~~~~~~~e~~~------------------ 94 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF-ERVHAVDPGEAQIRQALR-----HPRVTYAVAPAEDTG------------------ 94 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC-SEEEEEESCHHHHHTCCC-----CTTEEEEECCTTCCC------------------
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC-CEEEEEeCcHHhhhhhhh-----cCCceeehhhhhhhc------------------
Confidence 45699999999999999999764 599999999999986643 123889999998876
Q ss_pred cCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 212 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 212 ~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
+.++.||+|++- .++ .|. . ..++++++.++|||||+|++.+.+..
T Consensus 95 ~~~~sfD~v~~~------~~~------h~~-~----------~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 95 LPPASVDVAIAA------QAM------HWF-D----------LDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CCSSCEEEEEEC------SCC------TTC-C----------HHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred ccCCcccEEEEe------eeh------hHh-h----------HHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 456899999962 122 122 1 12468889999999999998876644
No 225
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.10 E-value=2.8e-10 Score=98.81 Aligned_cols=98 Identities=18% Similarity=0.212 Sum_probs=76.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
++.+|||+|||+|..+..+ +. +++++|+++.+++.++++. ..++++.+|+...+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~----------------- 90 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALP----------------- 90 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCC-----------------
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCC-----------------
Confidence 7889999999999988776 54 9999999999999998886 23778889987764
Q ss_pred ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+.++.||.|++... +.+.++ ..++|+++.++|||||++++++..
T Consensus 91 -~~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 91 -FPGESFDVVLLFTT------LEFVED----------------VERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp -SCSSCEEEEEEESC------TTTCSC----------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -CCCCcEEEEEEcCh------hhhcCC----------------HHHHHHHHHHHcCCCCEEEEEecC
Confidence 24578999996532 221111 246899999999999999998743
No 226
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.09 E-value=9.5e-10 Score=109.50 Aligned_cols=173 Identities=17% Similarity=0.190 Sum_probs=114.4
Q ss_pred ccceEEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--------------CEEEEEeCChhHHHHHHHHH
Q psy15212 110 FNGFCSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--------------IKLISVDNNLSRLNMISENL 175 (329)
Q Consensus 110 ~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--------------~~v~avD~~~~rl~~l~~n~ 175 (329)
+.|.||--..-+.+.+.++.+++|++|+|.|||+|++.+.+.+.+. ..++|+|+++.....++-|+
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 3577777777788889999999999999999999999988876431 36999999999999999999
Q ss_pred HHcCCc-eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccc---cccCCCCcccCChhHHHHHH
Q psy15212 176 KRLNLK-ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGV---VRRNPDIPWLRRKNDIKKLS 251 (329)
Q Consensus 176 ~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~---~~~~p~~~~~~~~~~~~~l~ 251 (329)
--.|+. ..+..+|....+.. ......+||+||.|||+++..- ..+.+.. ...+
T Consensus 275 ~lhg~~~~~I~~~dtL~~~~~--------------~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~-~~~~-------- 331 (530)
T 3ufb_A 275 LLHGLEYPRIDPENSLRFPLR--------------EMGDKDRVDVILTNPPFGGEEEKGILGNFPED-MQTA-------- 331 (530)
T ss_dssp HHHTCSCCEEECSCTTCSCGG--------------GCCGGGCBSEEEECCCSSCBCCHHHHTTSCGG-GCCC--------
T ss_pred HhcCCccccccccccccCchh--------------hhcccccceEEEecCCCCccccccccccCchh-cccc--------
Confidence 988987 67888887654310 1112357999999999975421 1111110 0011
Q ss_pred HHHHHHHHHHHhcCC-------CCCEEEEEcC--CCCccccHH-HHHHHHhhCCCc-EEecCCCcc
Q psy15212 252 KYSCKILNNLWKMLK-------PGGKLLFVTC--SLWFEESEE-QAIIFSKNHKDS-IRLNSPGQL 306 (329)
Q Consensus 252 ~~q~~lL~~a~~~Lk-------pgG~lvysTC--S~~~~Ene~-vv~~~l~~~~~~-~~~~~~~~~ 306 (329)
..+..++.++++.|| +||++.+.+- .+...-.+. +.+++++.+ .+ .++..|..+
T Consensus 332 ~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~~-~l~aII~LP~~~ 396 (530)
T 3ufb_A 332 ETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNF-NLHTIVRLPEGV 396 (530)
T ss_dssp BHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHHS-EEEEEEECCTTT
T ss_pred hhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchHHHHHHHHhhcC-EEEEEEECCccc
Confidence 123345666666665 7999887753 232222233 445556654 33 234445443
No 227
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.09 E-value=2.6e-10 Score=106.20 Aligned_cols=133 Identities=8% Similarity=0.037 Sum_probs=94.8
Q ss_pred CeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCC-ceEEEecCccccchhhhhhhhcccccccccc
Q psy15212 134 MYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNL-KATLILSDISKINLKKLYIDINKKTNNRFRF 211 (329)
Q Consensus 134 ~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~-~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
.+|||+|||.|+.+..+++..+ .+|+++|+++.+++.+++++....- +++++.+|+..+. ..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l----------------~~ 154 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVA----------------ES 154 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHH----------------HT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHH----------------hh
Confidence 3999999999999999998665 7999999999999999998865433 3899999998753 11
Q ss_pred cCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCc-cccHHHHHHH
Q psy15212 212 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF-EESEEQAIIF 290 (329)
Q Consensus 212 ~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~-~Ene~vv~~~ 290 (329)
..+++||+|++|++... +. |...+ ..++++.+.+.|+|||.|+..+.+-.+ .....+++.+
T Consensus 155 ~~~~~fDvIi~D~~~~~-~~----~~~L~-------------t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL 216 (317)
T 3gjy_A 155 FTPASRDVIIRDVFAGA-IT----PQNFT-------------TVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGM 216 (317)
T ss_dssp CCTTCEEEEEECCSTTS-CC----CGGGS-------------BHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHH
T ss_pred ccCCCCCEEEECCCCcc-cc----chhhh-------------HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHH
Confidence 23468999999975431 11 11001 146789999999999999987754322 1123455555
Q ss_pred HhhCCCcEEe
Q psy15212 291 SKNHKDSIRL 300 (329)
Q Consensus 291 l~~~~~~~~~ 300 (329)
-+.++....+
T Consensus 217 ~~vF~~v~~~ 226 (317)
T 3gjy_A 217 MEVFEHVAVI 226 (317)
T ss_dssp HHHCSEEEEE
T ss_pred HHHCCceEEE
Confidence 5566655544
No 228
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.09 E-value=5.7e-10 Score=99.24 Aligned_cols=113 Identities=12% Similarity=0.070 Sum_probs=83.4
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.+.++.+|||+|||+|..+..+++... +|+++|+|+.+++.+++++. ...++++.+|+..+....
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~------------ 117 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT--AANISYRLLDGLVPEQAA------------ 117 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC--CTTEEEEECCTTCHHHHH------------
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc--ccCceEEECccccccccc------------
Confidence 357888999999999999999998766 99999999999999998872 224889999998864110
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
.+.....||+|++..... . ...++ ...+|+++.+.|||||+++.++..
T Consensus 118 -~~~~~~~~d~v~~~~~~~------~-------~~~~~-------~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 118 -QIHSEIGDANIYMRTGFH------H-------IPVEK-------RELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp -HHHHHHCSCEEEEESSST------T-------SCGGG-------HHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred -ccccccCccEEEEcchhh------c-------CCHHH-------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 000113599999764322 1 11112 346899999999999998887654
No 229
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.08 E-value=9.1e-11 Score=112.85 Aligned_cols=82 Identities=20% Similarity=0.150 Sum_probs=68.3
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHc--CCc-eEEEecCccccchhhhhhhhcccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRL--NLK-ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~--g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
.+|.+|||+|||+|..++.+++. +.+|+++|+|+.+++.+++|++.+ |+. ++++++|+..+.
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L-------------- 156 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYL-------------- 156 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSH--------------
T ss_pred CCCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhh--------------
Confidence 35899999999999999999875 469999999999999999999998 885 899999998742
Q ss_pred cccccCCCCCCEEEEccCCccc
Q psy15212 208 RFRFYKNKYFDRILADLPCTGS 229 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~ 229 (329)
.....+.||.|++|||..+.
T Consensus 157 --~~~~~~~fDvV~lDPPrr~~ 176 (410)
T 3ll7_A 157 --PLIKTFHPDYIYVDPARRSG 176 (410)
T ss_dssp --HHHHHHCCSEEEECCEEC--
T ss_pred --hhccCCCceEEEECCCCcCC
Confidence 00112579999999998763
No 230
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.06 E-value=6.1e-10 Score=114.26 Aligned_cols=114 Identities=19% Similarity=0.191 Sum_probs=87.9
Q ss_pred hhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHc------CCc-eEEEecCccccchh
Q psy15212 125 APLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRL------NLK-ATLILSDISKINLK 195 (329)
Q Consensus 125 ~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~------g~~-v~~~~~D~~~~~~~ 195 (329)
...+...++.+|||+|||+|..+..+++..+ .+|+|+|+++.+++.++++++.. ++. ++++.+|+..++
T Consensus 714 LelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp-- 791 (950)
T 3htx_A 714 LKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFD-- 791 (950)
T ss_dssp HHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCC--
T ss_pred HHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCC--
Confidence 4444556889999999999999999998774 69999999999999999987643 554 899999998876
Q ss_pred hhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 196 KLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
...+.||+|++. +++.+-++ .....+++.+.++|||| .++++|
T Consensus 792 ----------------~~d~sFDlVV~~------eVLeHL~d--------------p~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 792 ----------------SRLHDVDIGTCL------EVIEHMEE--------------DQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp ----------------TTSCSCCEEEEE------SCGGGSCH--------------HHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred ----------------cccCCeeEEEEe------CchhhCCh--------------HHHHHHHHHHHHHcCCC-EEEEEe
Confidence 245789999973 33322211 11335789999999999 888887
Q ss_pred CC
Q psy15212 276 CS 277 (329)
Q Consensus 276 CS 277 (329)
..
T Consensus 835 PN 836 (950)
T 3htx_A 835 PN 836 (950)
T ss_dssp CB
T ss_pred cC
Confidence 53
No 231
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.06 E-value=6.9e-12 Score=112.62 Aligned_cols=127 Identities=23% Similarity=0.272 Sum_probs=91.6
Q ss_pred EEEechhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 114 CSIQDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 114 ~~~Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
+..+......+...+++.++++|||+|||+|..+..+++.. .+|+|+|+|+.+++.+++++. ..-.++++++|+.+.+
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~ 88 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQFQ 88 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTTT
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhcC
Confidence 44455556666677788889999999999999999999875 699999999999999888876 2223889999998765
Q ss_pred hhhhhhhhcccccccccccC-CCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHH---HHHHHH----HHHHhcC
Q psy15212 194 LKKLYIDINKKTNNRFRFYK-NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSK---YSCKIL----NNLWKML 265 (329)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~-~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~---~q~~lL----~~a~~~L 265 (329)
+. ++.| .|++|||+..+..+ +..+.. .....+ +.+.++|
T Consensus 89 ------------------~~~~~~f-~vv~n~Py~~~~~~--------------~~~~~~~~~~~~~~lm~q~e~a~rll 135 (245)
T 1yub_A 89 ------------------FPNKQRY-KIVGNIPYHLSTQI--------------IKKVVFESRASDIYLIVEEGFYKRTL 135 (245)
T ss_dssp ------------------CCCSSEE-EEEEECCSSSCHHH--------------HHHHHHHCCCEEEEEEEESSHHHHHH
T ss_pred ------------------cccCCCc-EEEEeCCccccHHH--------------HHHHHhCCCCCeEEEEeeHHHHHHHh
Confidence 12 2578 89999998744211 111110 011233 6688899
Q ss_pred CCCCEEEEEc
Q psy15212 266 KPGGKLLFVT 275 (329)
Q Consensus 266 kpgG~lvysT 275 (329)
+|||+++..+
T Consensus 136 ~~~G~l~v~~ 145 (245)
T 1yub_A 136 DIHRTLGLLL 145 (245)
T ss_dssp CGGGSHHHHT
T ss_pred CCCCchhhhh
Confidence 9999877644
No 232
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.05 E-value=9.3e-10 Score=97.05 Aligned_cols=106 Identities=15% Similarity=0.172 Sum_probs=81.0
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
.++.+|||+|||+|..+..+++... +|+++|+|+.+++.++++.. .++++.+|+...+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~----~~~~~~~d~~~~~----------------- 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP----DATLHQGDMRDFR----------------- 96 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT----TCEEEECCTTTCC-----------------
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC----CCEEEECCHHHcc-----------------
Confidence 5678999999999999999998755 99999999999999988752 3788899988764
Q ss_pred ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
. .+.||+|++- .+++...+ +.+ ...++|+.+.++|+|||+++.+++..
T Consensus 97 -~-~~~~D~v~~~-----~~~~~~~~------~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 97 -L-GRKFSAVVSM-----FSSVGYLK------TTE-------ELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp -C-SSCEEEEEEC-----TTGGGGCC------SHH-------HHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred -c-CCCCcEEEEc-----CchHhhcC------CHH-------HHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 2 4689999941 11221111 111 24568999999999999999987653
No 233
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.05 E-value=1.8e-09 Score=102.32 Aligned_cols=110 Identities=20% Similarity=0.170 Sum_probs=86.3
Q ss_pred hhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhc
Q psy15212 126 PLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDIN 202 (329)
Q Consensus 126 ~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~ 202 (329)
..++..++.+|||+|||+|..+..+++..+ .+++++|+ +.+++.+++++...++. ++++.+|+.+..
T Consensus 176 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------- 245 (374)
T 1qzz_A 176 DAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL--------- 245 (374)
T ss_dssp HTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---------
T ss_pred HhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---------
Confidence 344567788999999999999999999876 79999999 99999999999998885 899999987521
Q ss_pred ccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 203 KKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 203 ~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
+ ..||+|++... +. .+... ...++|+++.+.|+|||++++...
T Consensus 246 ----------~-~~~D~v~~~~v------l~-------~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 ----------P-VTADVVLLSFV------LL-------NWSDE-------DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ----------S-CCEEEEEEESC------GG-------GSCHH-------HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ----------C-CCCCEEEEecc------cc-------CCCHH-------HHHHHHHHHHHhcCCCcEEEEEec
Confidence 2 24999997432 11 11111 124689999999999999988765
No 234
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.05 E-value=8.5e-10 Score=101.90 Aligned_cols=88 Identities=17% Similarity=0.155 Sum_probs=73.6
Q ss_pred hHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhh
Q psy15212 120 AAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYI 199 (329)
Q Consensus 120 ~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~ 199 (329)
....++..+++.++++|||+|||+|..|..+++. +.+|+|+|+|+.+++.+++++... -+++++++|+.+++
T Consensus 38 i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~-~~v~vi~gD~l~~~------ 109 (295)
T 3gru_A 38 FVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY-NNIEIIWGDALKVD------ 109 (295)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC-SSEEEEESCTTTSC------
T ss_pred HHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC-CCeEEEECchhhCC------
Confidence 3445566678889999999999999999999987 459999999999999999998732 24899999998865
Q ss_pred hhcccccccccccCCCCCCEEEEccCCc
Q psy15212 200 DINKKTNNRFRFYKNKYFDRILADLPCT 227 (329)
Q Consensus 200 ~~~~~~~~~~~~~~~~~fD~Vl~D~PCs 227 (329)
+....||+|+.++|+.
T Consensus 110 ------------~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 110 ------------LNKLDFNKVVANLPYQ 125 (295)
T ss_dssp ------------GGGSCCSEEEEECCGG
T ss_pred ------------cccCCccEEEEeCccc
Confidence 2335799999999975
No 235
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.04 E-value=5.5e-10 Score=97.57 Aligned_cols=101 Identities=18% Similarity=0.246 Sum_probs=77.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++. .+++.+|+.... .
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~----------------~ 87 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMD----------------M 87 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS------SEEEESCTTTCC----------------C
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcC----------------C
Confidence 67889999999999999999987 679999999999999887654 267788887632 1
Q ss_pred ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.+.++.||.|++.. ++.+.++ ...+|+.+.++|+|||+++.++-
T Consensus 88 ~~~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 88 PYEEEQFDCVIFGD------VLEHLFD----------------PWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp CSCTTCEEEEEEES------CGGGSSC----------------HHHHHHHTGGGEEEEEEEEEEEE
T ss_pred CCCCCccCEEEECC------hhhhcCC----------------HHHHHHHHHHHcCCCCEEEEEeC
Confidence 12457899999742 2222211 13689999999999999999863
No 236
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.03 E-value=9e-09 Score=97.50 Aligned_cols=111 Identities=12% Similarity=0.114 Sum_probs=85.2
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
..+.+|||+|||+|..+..+++..+ .+++++|+ +.+++.+++++...++. ++++.+|+.....
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------- 243 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDV------------- 243 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC-------------
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCC-------------
Confidence 4567999999999999999999876 79999999 99999999999988874 8999999876410
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
.+ ++.||+|++-- ++. .+..++ ..++|+++.+.|||||+|+.....+.
T Consensus 244 ---~~-p~~~D~v~~~~------vlh-------~~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 244 ---PF-PTGFDAVWMSQ------FLD-------CFSEEE-------VISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp ---CC-CCCCSEEEEES------CST-------TSCHHH-------HHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred ---CC-CCCcCEEEEec------hhh-------hCCHHH-------HHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 01 26799998522 111 122222 34689999999999999988765443
No 237
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.03 E-value=1.1e-09 Score=101.46 Aligned_cols=115 Identities=21% Similarity=0.232 Sum_probs=82.9
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcC-------C-ceEEEecCccccchhhhhhhhc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLN-------L-KATLILSDISKINLKKLYIDIN 202 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g-------~-~v~~~~~D~~~~~~~~~~~~~~ 202 (329)
.++.+|||+|||+|..+..+++....+++++|+++.+++.++++....+ . .++++.+|+.......
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~------ 106 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLID------ 106 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTT------
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhh------
Confidence 3678999999999999999997544799999999999999999987652 2 3789999988753000
Q ss_pred cccccccccc-CCCCCCEEEEccCCccccccccCCCCccc-CChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 203 KKTNNRFRFY-KNKYFDRILADLPCTGSGVVRRNPDIPWL-RRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 203 ~~~~~~~~~~-~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~-~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
.+. ..+.||+|++.-. + .|. .+.. ....+|+.+.+.|||||.++.+|..
T Consensus 107 -------~~~~~~~~fD~V~~~~~------l------~~~~~~~~-------~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 107 -------KFRDPQMCFDICSCQFV------C------HYSFESYE-------QADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp -------TCSSTTCCEEEEEEETC------G------GGGGGSHH-------HHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred -------hcccCCCCEEEEEEecc------h------hhccCCHH-------HHHHHHHHHHHHhCCCcEEEEecCC
Confidence 000 2348999996421 1 121 1111 2346899999999999999988653
No 238
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.02 E-value=9.4e-10 Score=112.64 Aligned_cols=175 Identities=10% Similarity=0.054 Sum_probs=105.8
Q ss_pred cceEEEechhHHHHhhh----cC--CCCCCeEEeecCCCchHHHHHHHhCC----CEEEEEeCChhHHHHH--HHHHHH-
Q psy15212 111 NGFCSIQDAAAQLAAPL----LD--IRSGMYVLDACSAPGGKTCHLLEIAD----IKLISVDNNLSRLNMI--SENLKR- 177 (329)
Q Consensus 111 ~G~~~~Qd~~s~l~~~~----l~--~~~g~~VLDlcag~G~kt~~la~~~~----~~v~avD~~~~rl~~l--~~n~~~- 177 (329)
.|.++--..-+.+++.+ +. ..++.+|||+|||+|++.+.+++..+ ..++|+|+++..++.+ +.|+..
T Consensus 294 ~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 294 EGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp CBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred CceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 35555544545555544 32 24688999999999999999998764 4799999999999999 666554
Q ss_pred ---cCCc-eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH---
Q psy15212 178 ---LNLK-ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL--- 250 (329)
Q Consensus 178 ---~g~~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l--- 250 (329)
.|+. ..+...|..... .....+||+|++|||+++....... ..+....+
T Consensus 374 ~LlhGi~~~~I~~dD~L~~~-----------------~~~~~kFDVVIgNPPYg~~~~~~~e-------~kd~~~r~~~g 429 (878)
T 3s1s_A 374 QLVSSNNAPTITGEDVCSLN-----------------PEDFANVSVVVMNPPYVSGVTDPAI-------KRKFAHKIIQL 429 (878)
T ss_dssp TTCBTTBCCEEECCCGGGCC-----------------GGGGTTEEEEEECCBCCSSCCCHHH-------HHHHHHHHHHH
T ss_pred hhhcCCCcceEEecchhccc-----------------ccccCCCCEEEECCCccccccchhh-------hhhHHHHhhhh
Confidence 2333 355555555422 0123689999999999743221100 00000001
Q ss_pred -----------HHHHHHHHHHHHhcCCCCCEEEEEcCC-CCc--cccHHHHHHHHhhCCCc-EEecCCC-cccCC
Q psy15212 251 -----------SKYSCKILNNLWKMLKPGGKLLFVTCS-LWF--EESEEQAIIFSKNHKDS-IRLNSPG-QLLPT 309 (329)
Q Consensus 251 -----------~~~q~~lL~~a~~~LkpgG~lvysTCS-~~~--~Ene~vv~~~l~~~~~~-~~~~~~~-~~~p~ 309 (329)
......++.++.++|++||++++.+-. +.. ......+.+++-++... .++..+. .++++
T Consensus 430 ~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~LLe~~~I~aIIdLP~~~~F~~ 504 (878)
T 3s1s_A 430 TGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNFGLEHIFLYPREGLFEE 504 (878)
T ss_dssp HSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHHHHHTTTTCEEEEEECCBCCSSCS
T ss_pred ccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHHHHHHhCCCeEEEEECCCccccCC
Confidence 123566899999999999999987643 322 11234444444433233 3344443 45543
No 239
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.02 E-value=7.5e-10 Score=99.93 Aligned_cols=96 Identities=18% Similarity=0.260 Sum_probs=77.1
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.++++. ..+.++.+|+..++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~---------------- 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRLP---------------- 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSCS----------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhCC----------------
Confidence 5788999999999999999999864 79999999999999988764 23678888987654
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+.++.||.|++... + ..++.+.++|||||+++.++-.
T Consensus 144 --~~~~~fD~v~~~~~----------~-------------------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 144 --FSDTSMDAIIRIYA----------P-------------------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp --BCTTCEEEEEEESC----------C-------------------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred --CCCCceeEEEEeCC----------h-------------------hhHHHHHHhcCCCcEEEEEEcC
Confidence 24568999996321 0 1367888999999999988643
No 240
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.01 E-value=2.1e-09 Score=110.37 Aligned_cols=118 Identities=13% Similarity=0.158 Sum_probs=85.6
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhC-------------------------------------------CCEEEEEeC
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIA-------------------------------------------DIKLISVDN 163 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~-------------------------------------------~~~v~avD~ 163 (329)
+....++..|||+|||+|++++.+|... ...|+|+|+
T Consensus 185 ~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Di 264 (703)
T 3v97_A 185 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDS 264 (703)
T ss_dssp HTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEES
T ss_pred hhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEEC
Confidence 4456788999999999999999888652 147999999
Q ss_pred ChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCccc
Q psy15212 164 NLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWL 241 (329)
Q Consensus 164 ~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~ 241 (329)
++.+++.++.|+++.|+. +++.++|+..+. .....+.||+|++|||+.. . ..
T Consensus 265 d~~av~~A~~N~~~agv~~~i~~~~~D~~~~~----------------~~~~~~~~d~Iv~NPPYG~-R---------lg 318 (703)
T 3v97_A 265 DARVIQRARTNARLAGIGELITFEVKDVAQLT----------------NPLPKGPYGTVLSNPPYGE-R---------LD 318 (703)
T ss_dssp CHHHHHHHHHHHHHTTCGGGEEEEECCGGGCC----------------CSCTTCCCCEEEECCCCCC-------------
T ss_pred CHHHHHHHHHHHHHcCCCCceEEEECChhhCc----------------cccccCCCCEEEeCCCccc-c---------cc
Confidence 999999999999999996 899999998764 1111237999999999841 0 00
Q ss_pred CChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 242 RRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 242 ~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
+...+.. +.. .+...++.+.|||+++.-|
T Consensus 319 -~~~~l~~---ly~-~l~~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 319 -SEPALIA---LHS-LLGRIMKNQFGGWNLSLFS 347 (703)
T ss_dssp -CCHHHHH---HHH-HHHHHHHHHCTTCEEEEEE
T ss_pred -chhHHHH---HHH-HHHHHHHhhCCCCeEEEEe
Confidence 1122222 222 2445555567899888764
No 241
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.00 E-value=3.2e-09 Score=98.82 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=85.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
.++.+|||+|||+|..+..+++..+ .+++++|++ .+++.+++++.+.++. ++++.+|+.+.+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------------- 228 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD-------------- 228 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC--------------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC--------------
Confidence 6788999999999999999999876 699999999 9999999999999885 899999987644
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
. ...||+|++.-. +. .+... ...++|+++.+.|+|||+++.......
T Consensus 229 ----~-~~~~D~v~~~~~------l~-------~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 229 ----Y-GNDYDLVLLPNF------LH-------HFDVA-------TCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp ----C-CSCEEEEEEESC------GG-------GSCHH-------HHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred ----C-CCCCcEEEEcch------hc-------cCCHH-------HHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 1 234999997221 11 11111 135689999999999999888765443
No 242
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.99 E-value=1.9e-09 Score=93.88 Aligned_cols=118 Identities=14% Similarity=0.114 Sum_probs=83.5
Q ss_pred HHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhc
Q psy15212 123 LAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDIN 202 (329)
Q Consensus 123 l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~ 202 (329)
+...+....++.+|||+|||+|..+..++ .+|+++|+++. .++++.+|+...+
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~--------------~~~~~~~d~~~~~--------- 110 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR----NPVHCFDLASL--------------DPRVTVCDMAQVP--------- 110 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS--------------STTEEESCTTSCS---------
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC--------------CceEEEeccccCC---------
Confidence 44444445678899999999999887764 58999999998 3567788887754
Q ss_pred ccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccc
Q psy15212 203 KKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEE 282 (329)
Q Consensus 203 ~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~E 282 (329)
+.++.||+|++... +. +++ ...+|+.+.++|+|||++++++.... ..
T Consensus 111 ---------~~~~~fD~v~~~~~------l~-~~~----------------~~~~l~~~~~~L~~gG~l~i~~~~~~-~~ 157 (215)
T 2zfu_A 111 ---------LEDESVDVAVFCLS------LM-GTN----------------IRDFLEEANRVLKPGGLLKVAEVSSR-FE 157 (215)
T ss_dssp ---------CCTTCEEEEEEESC------CC-SSC----------------HHHHHHHHHHHEEEEEEEEEEECGGG-CS
T ss_pred ---------CCCCCEeEEEEehh------cc-ccC----------------HHHHHHHHHHhCCCCeEEEEEEcCCC-CC
Confidence 24578999996432 21 111 24678899999999999999875422 23
Q ss_pred cHHHHHHHHhhCCCcEEec
Q psy15212 283 SEEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 283 ne~vv~~~l~~~~~~~~~~ 301 (329)
+.+.+...++.. +++.+.
T Consensus 158 ~~~~~~~~l~~~-Gf~~~~ 175 (215)
T 2zfu_A 158 DVRTFLRAVTKL-GFKIVS 175 (215)
T ss_dssp CHHHHHHHHHHT-TEEEEE
T ss_pred CHHHHHHHHHHC-CCEEEE
Confidence 556677777776 676554
No 243
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.99 E-value=1.7e-10 Score=104.61 Aligned_cols=91 Identities=12% Similarity=0.082 Sum_probs=71.9
Q ss_pred HHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCCh-------hHHHHHHHHHHHcCC-c-eEEEecCccc
Q psy15212 121 AQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNL-------SRLNMISENLKRLNL-K-ATLILSDISK 191 (329)
Q Consensus 121 s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~-------~rl~~l~~n~~~~g~-~-v~~~~~D~~~ 191 (329)
..+...++.+.+|++|||+|||+|..++.+|.. +++|+++|+++ .+++.+++|++.+++ . ++++++|+..
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAE 150 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHH
Confidence 444555556677899999999999999999986 56999999999 999999999988877 3 8999999877
Q ss_pred cchhhhhhhhcccccccccccCC--CCCCEEEEccCCcc
Q psy15212 192 INLKKLYIDINKKTNNRFRFYKN--KYFDRILADLPCTG 228 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~--~~fD~Vl~D~PCsg 228 (329)
+. ..+.+ +.||+|++|||...
T Consensus 151 ~l----------------~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 151 QM----------------PALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HH----------------HHHHHHHCCCSEEEECCCC--
T ss_pred HH----------------HhhhccCCCccEEEECCCCCC
Confidence 42 10122 57999999999753
No 244
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.98 E-value=2.2e-09 Score=96.39 Aligned_cols=90 Identities=11% Similarity=0.178 Sum_probs=72.0
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhh
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKK 196 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~ 196 (329)
+......+...+++.++++|||+|||+|..|..+++.. .+|+|+|+|+.+++.+++++... -.++++.+|+.+.+
T Consensus 15 d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~-~~v~~~~~D~~~~~--- 89 (244)
T 1qam_A 15 SKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDILQFK--- 89 (244)
T ss_dssp CHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC-CSEEEECCCGGGCC---
T ss_pred CHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC-CCeEEEEChHHhCC---
Confidence 34444555666778889999999999999999999876 59999999999999999998643 24899999998865
Q ss_pred hhhhhcccccccccccC-CCCCCEEEEccCCc
Q psy15212 197 LYIDINKKTNNRFRFYK-NKYFDRILADLPCT 227 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~-~~~fD~Vl~D~PCs 227 (329)
+. ...| .|+.|+|+.
T Consensus 90 ---------------~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 90 ---------------FPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp ---------------CCSSCCC-EEEEECCGG
T ss_pred ---------------cccCCCe-EEEEeCCcc
Confidence 12 2345 799999976
No 245
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.97 E-value=1.3e-08 Score=96.06 Aligned_cols=113 Identities=15% Similarity=0.185 Sum_probs=87.6
Q ss_pred HhhhcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhh
Q psy15212 124 AAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYID 200 (329)
Q Consensus 124 ~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~ 200 (329)
+...++..++.+|||+|||+|..+..+++..+ .+++++|+ +.+++.+++++++.++. ++++.+|+...+
T Consensus 182 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------- 253 (359)
T 1x19_A 182 LLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES------- 253 (359)
T ss_dssp HHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC-------
T ss_pred HHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC-------
Confidence 33445567788999999999999999999876 79999999 99999999999998874 899999988654
Q ss_pred hcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
. ..+|+|++.-. +. .+.. ....++|+++.+.|+|||++++....
T Consensus 254 -----------~--~~~D~v~~~~v------lh-------~~~d-------~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 254 -----------Y--PEADAVLFCRI------LY-------SANE-------QLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp -----------C--CCCSEEEEESC------GG-------GSCH-------HHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred -----------C--CCCCEEEEech------hc-------cCCH-------HHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 1 23499996321 11 1111 12456899999999999999877644
No 246
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.97 E-value=5e-09 Score=91.74 Aligned_cols=95 Identities=16% Similarity=0.166 Sum_probs=73.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRF 211 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
++.+|||+|||+|..+..++.. +++|+++.+++.++++ .++++.+|+...+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~------------------ 97 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR------GVFVLKGTAENLP------------------ 97 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT------TCEEEECBTTBCC------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc------CCEEEEcccccCC------------------
Confidence 3789999999999999988753 9999999999998887 4678888887654
Q ss_pred cCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 212 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 212 ~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+..+.||+|++.. ++...++ ...+|+.+.++|+|||.++.++..
T Consensus 98 ~~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 98 LKDESFDFALMVT------TICFVDD----------------PERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp SCTTCEEEEEEES------CGGGSSC----------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCCeeEEEEcc------hHhhccC----------------HHHHHHHHHHHcCCCcEEEEEEeC
Confidence 2456899999753 2221111 246889999999999999998643
No 247
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.96 E-value=3.8e-09 Score=97.17 Aligned_cols=99 Identities=17% Similarity=0.149 Sum_probs=69.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceE-EEecCccccchhhhhhhhccccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKAT-LILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~-~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
+|.+|||+|||+|+.|..+++...++|+|+|+++.+++...++ .-.+. +...|++.+.. .
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~----~~rv~~~~~~ni~~l~~---------------~ 145 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ----DDRVRSMEQYNFRYAEP---------------V 145 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT----CTTEEEECSCCGGGCCG---------------G
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CcccceecccCceecch---------------h
Confidence 5779999999999999999987436999999999999874322 11222 22234443320 0
Q ss_pred ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
.++...||.|++|....+. ..+|.++.++|+|||+++..
T Consensus 146 ~l~~~~fD~v~~d~sf~sl-------------------------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISL-------------------------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GCTTCCCSEEEECCSSSCG-------------------------GGTHHHHHHHSCTTCEEEEE
T ss_pred hCCCCCCCEEEEEeeHhhH-------------------------HHHHHHHHHHcCcCCEEEEE
Confidence 1123459999998754311 34789999999999999986
No 248
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.95 E-value=8.9e-09 Score=96.07 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=84.7
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
..++.+|||+|||+|..+..+++..+ .+++++|+ +..++.+++++...++. ++++.+|+....
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------- 232 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL------------- 232 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-------------
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC-------------
Confidence 34568999999999999999999877 69999999 99999999999998874 899999987321
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
+ ..||+|++- .++. .+..+ .+.++|+++.+.|+|||+|+......
T Consensus 233 ------p-~~~D~v~~~------~vlh-------~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 233 ------P-AGAGGYVLS------AVLH-------DWDDL-------SAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp ------C-CSCSEEEEE------SCGG-------GSCHH-------HHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred ------C-CCCcEEEEe------hhhc-------cCCHH-------HHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 2 279999952 1211 11221 24578999999999999999876543
No 249
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.95 E-value=2.8e-09 Score=100.43 Aligned_cols=110 Identities=18% Similarity=0.219 Sum_probs=86.0
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
.++..++.+|||+|||+|..+..+++..+ .+++++|+ +.+++.+++++...++. ++++.+|+.+..
T Consensus 178 ~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------- 246 (360)
T 1tw3_A 178 AYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL---------- 246 (360)
T ss_dssp HSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC----------
T ss_pred hCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC----------
Confidence 34566788999999999999999998876 79999999 99999999999998884 899999987522
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+ ..||+|++... +. .+... ...++|+++.+.|+|||+++++...
T Consensus 247 ---------~-~~~D~v~~~~v------l~-------~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 247 ---------P-RKADAIILSFV------LL-------NWPDH-------DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp ---------S-SCEEEEEEESC------GG-------GSCHH-------HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ---------C-CCccEEEEccc------cc-------CCCHH-------HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 2 34999996432 11 11111 1246899999999999999987654
No 250
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.95 E-value=2.5e-09 Score=96.83 Aligned_cols=153 Identities=11% Similarity=0.116 Sum_probs=88.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.+++.+|||+|||||+++..+++..+ ..++|+|+.......... ....|..+..+..++....
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-~~~~g~~ii~~~~~~dv~~--------------- 135 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-VQSLGWNIITFKDKTDIHR--------------- 135 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-CCBTTGGGEEEECSCCTTT---------------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-cCcCCCCeEEEeccceehh---------------
Confidence 56788999999999999999887766 578888886432100000 0111223334444432211
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCC-CEEEEEcCCCCccccHHHH
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG-GKLLFVTCSLWFEESEEQA 287 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkpg-G~lvysTCS~~~~Ene~vv 287 (329)
+.+..||+|++|.--+ +|.. .+.+.. +..+|+.|.++|+|| |.+|...-.-...+-.+.+
T Consensus 136 ---l~~~~~DlVlsD~apn-sG~~-------------~~D~~r--s~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~ 196 (277)
T 3evf_A 136 ---LEPVKCDTLLCDIGES-SSSS-------------VTEGER--TVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKL 196 (277)
T ss_dssp ---SCCCCCSEEEECCCCC-CSCH-------------HHHHHH--HHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHH
T ss_pred ---cCCCCccEEEecCccC-cCch-------------HHHHHH--HHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHH
Confidence 3457899999997544 5541 122222 233589999999999 9999754321123333444
Q ss_pred HHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEE
Q psy15212 288 IIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLF 324 (329)
Q Consensus 288 ~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l 324 (329)
..+-..+..+.... | ..+....+-|++|+-
T Consensus 197 ~~lk~~F~~V~~~K------P-aSR~~S~E~Y~V~~~ 226 (277)
T 3evf_A 197 ELLQRRFGGTVIRN------P-LSRNSTHEMYYVSGA 226 (277)
T ss_dssp HHHHHHHCCEEECC------T-TSCTTCCCEEEESSC
T ss_pred HHHHHhcCCEEEEe------C-CCCCCCCceEEEEec
Confidence 44444443333332 4 333356677777653
No 251
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.95 E-value=2.6e-09 Score=96.95 Aligned_cols=98 Identities=17% Similarity=0.043 Sum_probs=78.0
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHc-----CCceEEEecCccccchhhhhhhhccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRL-----NLKATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~-----g~~v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.+.+|||+|||+|+.+..+++. +.+|+++|+++.+++.+++++... .-+++++.+|+...
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~-------------- 136 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD-------------- 136 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC--------------
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH--------------
Confidence 4579999999999999999987 589999999999999998876432 12378888888753
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
. ++||+|++|.+- | . .+++.+.+.|+|||.++..+.+.
T Consensus 137 ------~-~~fD~Ii~d~~d---------p--------~----------~~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 137 ------I-KKYDLIFCLQEP---------D--------I----------HRIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp ------C-CCEEEEEESSCC---------C--------H----------HHHHHHHTTEEEEEEEEEEEECT
T ss_pred ------H-hhCCEEEECCCC---------h--------H----------HHHHHHHHhcCCCcEEEEEcCCc
Confidence 1 679999999531 1 0 16888999999999999876553
No 252
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.94 E-value=1.8e-09 Score=99.04 Aligned_cols=114 Identities=15% Similarity=0.152 Sum_probs=74.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHH----hCC-CEE--EEEeCChhHHHHHHHHHHHc-CCc-e--EEEecCccccchhhhh
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLE----IAD-IKL--ISVDNNLSRLNMISENLKRL-NLK-A--TLILSDISKINLKKLY 198 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~----~~~-~~v--~avD~~~~rl~~l~~n~~~~-g~~-v--~~~~~D~~~~~~~~~~ 198 (329)
+.++.+|||+|||+|..+..++. ..+ ..| +++|.|+.+++.+++++... ++. + .+..+|+..+.. .+.
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~ 128 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQS-RML 128 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHH-HHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhh-hhc
Confidence 45678999999999987765432 223 544 99999999999999998764 443 3 344555443210 000
Q ss_pred hhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 199 IDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
..+.+++||+|++- .++..-++ ..+.|+++.++|||||+++.++.+
T Consensus 129 -----------~~~~~~~fD~V~~~------~~l~~~~d----------------~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 129 -----------EKKELQKWDFIHMI------QMLYYVKD----------------IPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp -----------TTTCCCCEEEEEEE------SCGGGCSC----------------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -----------cccCCCceeEEEEe------eeeeecCC----------------HHHHHHHHHHHcCCCcEEEEEEec
Confidence 00135789999852 12222121 245799999999999999987543
No 253
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.94 E-value=1.8e-08 Score=95.55 Aligned_cols=112 Identities=15% Similarity=0.149 Sum_probs=87.3
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
.++..++.+|||+|||+|..+..+++..+ .+++++|+ +..++.+++++...++. ++++.+|+....
T Consensus 197 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---------- 265 (369)
T 3gwz_A 197 AYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI---------- 265 (369)
T ss_dssp HSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC----------
T ss_pred hCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC----------
Confidence 34556788999999999999999999876 69999999 99999999999999874 899999987321
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
+ ..||+|++-- ++. .+... ...++|+++.+.|+|||+|+.......
T Consensus 266 ---------p-~~~D~v~~~~------vlh-------~~~d~-------~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 266 ---------P-DGADVYLIKH------VLH-------DWDDD-------DVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp ---------C-SSCSEEEEES------CGG-------GSCHH-------HHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred ---------C-CCceEEEhhh------hhc-------cCCHH-------HHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 2 2799998632 111 11221 134689999999999999998765443
No 254
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.93 E-value=8.8e-10 Score=98.30 Aligned_cols=100 Identities=18% Similarity=0.172 Sum_probs=68.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRF 211 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
+|.+|||+|||+|+.+..+++....+|+|+|+|+.+++.++++..+.. ..-..++..... ..
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~---~~~~~~~~~~~~---------------~~ 98 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVV---VMEQFNFRNAVL---------------AD 98 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEE---EECSCCGGGCCG---------------GG
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcccc---ccccceEEEeCH---------------hH
Confidence 467999999999999999998732699999999999998666533221 111112222110 00
Q ss_pred cCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 212 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 212 ~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
+....||.+.+|...+.. ..+|..+.++|||||++++.
T Consensus 99 ~~~~~~d~~~~D~v~~~l-------------------------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 99 FEQGRPSFTSIDVSFISL-------------------------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CCSCCCSEEEECCSSSCG-------------------------GGTHHHHHHHSCTTCEEEEE
T ss_pred cCcCCCCEEEEEEEhhhH-------------------------HHHHHHHHHhccCCCEEEEE
Confidence 112247888888775532 34799999999999999986
No 255
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.92 E-value=1.1e-08 Score=96.09 Aligned_cols=112 Identities=13% Similarity=0.214 Sum_probs=86.9
Q ss_pred CCCC-CCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccc
Q psy15212 129 DIRS-GMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 129 ~~~~-g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
+..+ +.+|||+|||+|..+..+++..+ .+++++|+ +..++.+++++.+.++. ++++.+|+....
T Consensus 175 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------- 242 (352)
T 3mcz_A 175 GVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDAR----------- 242 (352)
T ss_dssp GGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGG-----------
T ss_pred CCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCc-----------
Confidence 4455 78999999999999999999876 79999999 88999999999998884 899999988753
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
. ...+.||+|++-- ++. .+..++ ..++|+++.+.|+|||+|+.....+
T Consensus 243 -----~-~~~~~~D~v~~~~------vlh-------~~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 243 -----N-FEGGAADVVMLND------CLH-------YFDARE-------AREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp -----G-GTTCCEEEEEEES------CGG-------GSCHHH-------HHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred -----c-cCCCCccEEEEec------ccc-------cCCHHH-------HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 1 1245699999621 221 112222 3568999999999999998876443
No 256
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.91 E-value=6.4e-09 Score=96.99 Aligned_cols=109 Identities=18% Similarity=0.217 Sum_probs=84.3
Q ss_pred cCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhccc
Q psy15212 128 LDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 128 l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
++..+ .+|||+|||+|..+..+++..+ .+++++|+ +.+++.+++++.+.++. ++++.+|+....
T Consensus 164 ~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------- 230 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEV----------- 230 (334)
T ss_dssp SCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCC-----------
T ss_pred CCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCC-----------
Confidence 34455 8999999999999999999876 69999999 99999999999887763 899999987621
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
++.||+|++.-. +. .+.... ..++|+++.+.|+|||+|+......
T Consensus 231 ---------~~~~D~v~~~~v------l~-------~~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 231 ---------PSNGDIYLLSRI------IG-------DLDEAA-------SLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp ---------CSSCSEEEEESC------GG-------GCCHHH-------HHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred ---------CCCCCEEEEchh------cc-------CCCHHH-------HHHHHHHHHHhcCCCCEEEEEEecc
Confidence 257999995321 11 112221 2578999999999999999886543
No 257
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.91 E-value=1.8e-09 Score=97.75 Aligned_cols=89 Identities=16% Similarity=0.124 Sum_probs=70.8
Q ss_pred HHHHhhhcCCCCC--CeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcC--------C-c-eEEEecC
Q psy15212 121 AQLAAPLLDIRSG--MYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLN--------L-K-ATLILSD 188 (329)
Q Consensus 121 s~l~~~~l~~~~g--~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g--------~-~-v~~~~~D 188 (329)
...+..++.+.+| ++|||+|||.|..++.+|.+ +++|+++|+++..++.+++++++.+ + . ++++++|
T Consensus 75 ~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 75 GEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp GSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 4555566777777 99999999999999999987 4589999999999888888876542 4 2 8899999
Q ss_pred ccccchhhhhhhhcccccccccccCCCCCCEEEEccCCc
Q psy15212 189 ISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCT 227 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCs 227 (329)
+..+. .... ..||+|++|||+.
T Consensus 154 ~~~~L----------------~~~~-~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 154 SLTAL----------------TDIT-PRPQVVYLDPMFP 175 (258)
T ss_dssp HHHHS----------------TTCS-SCCSEEEECCCCC
T ss_pred HHHHH----------------HhCc-ccCCEEEEcCCCC
Confidence 88753 1112 3699999999975
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.90 E-value=4.5e-09 Score=95.07 Aligned_cols=90 Identities=13% Similarity=0.180 Sum_probs=72.2
Q ss_pred HHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhh
Q psy15212 121 AQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYID 200 (329)
Q Consensus 121 s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~ 200 (329)
...++..+++.+|++|||+|||+|..|..+++.. ++|+|+|+|+.+++.+++++.. .-.++++++|+.+++.+.
T Consensus 18 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~~~~~~---- 91 (255)
T 3tqs_A 18 LQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQFDFSS---- 91 (255)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTTCCGGG----
T ss_pred HHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHhCCHHH----
Confidence 4445566788899999999999999999999865 6999999999999999999875 224899999999875211
Q ss_pred hcccccccccccCCCCCCEEEEccCCc
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCT 227 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCs 227 (329)
...++.|| |+.|+|+.
T Consensus 92 ----------~~~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 92 ----------VKTDKPLR-VVGNLPYN 107 (255)
T ss_dssp ----------SCCSSCEE-EEEECCHH
T ss_pred ----------hccCCCeE-EEecCCcc
Confidence 11235688 99999975
No 259
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.89 E-value=3.8e-09 Score=95.18 Aligned_cols=101 Identities=12% Similarity=0.070 Sum_probs=81.8
Q ss_pred CCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRF 211 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
..+|||+|||.|-.++.++...+ .+++|+|+|+.+++.+++|+.++|+...+.+.|.....
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~------------------ 194 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR------------------ 194 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC------------------
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC------------------
Confidence 56999999999999999987655 79999999999999999999999999888899977643
Q ss_pred cCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEE
Q psy15212 212 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLF 273 (329)
Q Consensus 212 ~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvy 273 (329)
..+.||+||+. .-+..|...|+.-+-+.++.|+++|.+|-
T Consensus 195 -p~~~~DvaL~l---------------------kti~~Le~q~kg~g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 195 -LDEPADVTLLL---------------------KTLPCLETQQRGSGWEVIDIVNSPNIVVT 234 (281)
T ss_dssp -CCSCCSEEEET---------------------TCHHHHHHHSTTHHHHHHHHSSCSEEEEE
T ss_pred -CCCCcchHHHH---------------------HHHHHhhhhhhHHHHHHHHHhCCCCEEEe
Confidence 45789999852 22445555555444488899999997763
No 260
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.88 E-value=3e-08 Score=90.48 Aligned_cols=119 Identities=12% Similarity=0.065 Sum_probs=80.9
Q ss_pred CCCeEEeecCCC---chHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccc
Q psy15212 132 SGMYVLDACSAP---GGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 132 ~g~~VLDlcag~---G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
+..+|||+|||+ |..+..+++..+ .+|+++|+|+.+++.+++++... -.++++.+|+..... +. ... ....
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~-~~v~~~~~D~~~~~~--~~-~~~-~~~~ 151 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD-PNTAVFTADVRDPEY--IL-NHP-DVRR 151 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC-TTEEEEECCTTCHHH--HH-HSH-HHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC-CCeEEEEeeCCCchh--hh-ccc-hhhc
Confidence 447999999999 988766666555 79999999999999999998532 238899999986420 00 000 0000
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
.+....||.|++. +++..-|+. + ...+|+++.+.|+|||+|++++...
T Consensus 152 ---~~d~~~~d~v~~~------~vlh~~~d~-------~-------~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 152 ---MIDFSRPAAIMLV------GMLHYLSPD-------V-------VDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp ---HCCTTSCCEEEET------TTGGGSCTT-------T-------HHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred ---cCCCCCCEEEEEe------chhhhCCcH-------H-------HHHHHHHHHHhCCCCcEEEEEEecC
Confidence 0122479999853 333322221 1 3468999999999999999987553
No 261
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.86 E-value=9.1e-09 Score=95.71 Aligned_cols=90 Identities=19% Similarity=0.245 Sum_probs=69.2
Q ss_pred HhhhcCCCCCCeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhh
Q psy15212 124 AAPLLDIRSGMYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDI 201 (329)
Q Consensus 124 ~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~ 201 (329)
+..+|.++||+.++|+++|.||.|..+++.++ ++|+|+|.++.+++.++ ++ .+-.++++++++.++. .-+
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~~~Rv~lv~~nF~~l~-~~L---- 120 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--DDPRFSIIHGPFSALG-EYV---- 120 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--CCTTEEEEESCGGGHH-HHH----
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--cCCcEEEEeCCHHHHH-HHH----
Confidence 34566789999999999999999999999865 89999999999999884 33 2223889999988764 000
Q ss_pred cccccccccccC-CCCCCEEEEccCCccc
Q psy15212 202 NKKTNNRFRFYK-NKYFDRILADLPCTGS 229 (329)
Q Consensus 202 ~~~~~~~~~~~~-~~~fD~Vl~D~PCsg~ 229 (329)
.... .+++|.||.|-.||+.
T Consensus 121 --------~~~g~~~~vDgILfDLGVSS~ 141 (347)
T 3tka_A 121 --------AERDLIGKIDGILLDLGVSSP 141 (347)
T ss_dssp --------HHTTCTTCEEEEEEECSCCHH
T ss_pred --------HhcCCCCcccEEEECCccCHH
Confidence 0001 1369999999999876
No 262
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.84 E-value=5.3e-09 Score=94.77 Aligned_cols=150 Identities=13% Similarity=0.130 Sum_probs=87.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
++++.+|||+|||||+++..+++..+ ..|+++|+.......... .+..+..+..+..++....
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~~~~g~~ii~~~~~~dv~~--------------- 151 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-RTTLGWNLIRFKDKTDVFN--------------- 151 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCGGG---------------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-cccCCCceEEeeCCcchhh---------------
Confidence 56788999999999999999987777 688999997542111100 0112323222222211111
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCC--CEEEEEcCCCCc--c-cc
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG--GKLLFVTCSLWF--E-ES 283 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkpg--G~lvysTCS~~~--~-En 283 (329)
+...++|+||+|.--+ +|.- .+.+.. +..+|+-|.++|+|| |.+|. .++. . +-
T Consensus 152 ---l~~~~~DvVLSDmApn-sG~~-------------~~D~~r--s~~LL~~A~~~Lk~g~~G~Fv~---KvF~pyg~~~ 209 (282)
T 3gcz_A 152 ---MEVIPGDTLLCDIGES-SPSI-------------AVEEQR--TLRVLNCAKQWLQEGNYTEFCI---KVLCPYTPLI 209 (282)
T ss_dssp ---SCCCCCSEEEECCCCC-CSCH-------------HHHHHH--HHHHHHHHHHHHHHHCCCEEEE---EESCCCSHHH
T ss_pred ---cCCCCcCEEEecCccC-CCCh-------------HHHHHH--HHHHHHHHHHHcCCCCCCcEEE---EEecCCCccH
Confidence 2457899999997655 6551 122222 234588999999999 99995 4444 3 33
Q ss_pred HHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEE
Q psy15212 284 EEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLF 324 (329)
Q Consensus 284 e~vv~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l 324 (329)
.+..+.+-..+..+.... | ..+....+-|++|+-
T Consensus 210 ~~l~~~lk~~F~~V~~~K------P-aSR~~S~E~Y~V~~~ 243 (282)
T 3gcz_A 210 MEELSRLQLKHGGGLVRV------P-LSRNSTHEMYWVSGT 243 (282)
T ss_dssp HHHHHHHHHHHCCEEECC------T-TSCTTCCCEEEETTC
T ss_pred HHHHHHHHHhcCCEEEEc------C-CCcccCcceeEEEec
Confidence 334444433443333322 3 323356677777643
No 263
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.84 E-value=1.2e-08 Score=93.03 Aligned_cols=150 Identities=12% Similarity=0.087 Sum_probs=87.1
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.++|.+|||+||||||++-.+++..+ ..|+|+|+......... ..+..+..+.....+....
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~-~~~~~~~~iv~~~~~~di~---------------- 141 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPI-HMQTLGWNIVKFKDKSNVF---------------- 141 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC-CCCBTTGGGEEEECSCCTT----------------
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccc-cccccCCceEEeecCceee----------------
Confidence 35789999999999999999998766 58899999653210000 0001122222222111111
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCC-CEEEEEcCCCCc--c-ccH
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG-GKLLFVTCSLWF--E-ESE 284 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkpg-G~lvysTCS~~~--~-Ene 284 (329)
.+.+..+|+|++|.-.+ +|.. .+.+. .|..+|.-|.++|+|| |.+|.- ++. . +-.
T Consensus 142 --~l~~~~~DlVlsD~APn-sG~~-------------~~D~~--rs~~LL~~A~~~LkpG~G~FV~K---vF~~yG~~~~ 200 (300)
T 3eld_A 142 --TMPTEPSDTLLCDIGES-SSNP-------------LVERD--RTMKVLENFERWKHVNTENFCVK---VLAPYHPDVI 200 (300)
T ss_dssp --TSCCCCCSEEEECCCCC-CSSH-------------HHHHH--HHHHHHHHHHHHCCTTCCEEEEE---ESSTTSHHHH
T ss_pred --ecCCCCcCEEeecCcCC-CCCH-------------HHHHH--HHHHHHHHHHHHhcCCCCcEEEE---eccccCccHH
Confidence 12457899999998877 7752 22232 2344589999999999 999954 444 3 333
Q ss_pred HHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEE
Q psy15212 285 EQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLF 324 (329)
Q Consensus 285 ~vv~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l 324 (329)
+.+..+-..+..+.... | ..+....+-|++|..
T Consensus 201 ~ll~~lk~~F~~V~~~K------P-aSR~~S~E~Y~V~~~ 233 (300)
T 3eld_A 201 EKLERLQLRFGGGIVRV------P-FSRNSTHEMYYISGA 233 (300)
T ss_dssp HHHHHHHHHHCCEEECC------T-TSCTTCCCEEEESSC
T ss_pred HHHHHHHHhCCcEEEEe------C-CCCCCChHHeeeccC
Confidence 34444433333333322 4 333356677777654
No 264
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.83 E-value=2e-08 Score=89.56 Aligned_cols=107 Identities=15% Similarity=-0.014 Sum_probs=80.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
.+..+|||+|||.|-.++.++ .+..++|+|+|+.+++.+++++.++|.+..+.++|.....
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~----------------- 164 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP----------------- 164 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC-----------------
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC-----------------
Confidence 356799999999999998877 3479999999999999999999999988899999987654
Q ss_pred ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE-cCCCC
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV-TCSLW 279 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys-TCS~~ 279 (329)
..+.||+|++. .-+..|...|+.-+.++++.|+++|.+|-. |-|+.
T Consensus 165 --~~~~~DvvLll---------------------k~lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtksl~ 211 (253)
T 3frh_A 165 --PAEAGDLALIF---------------------KLLPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLG 211 (253)
T ss_dssp --CCCBCSEEEEE---------------------SCHHHHHHHSTTHHHHHHHHCBCSEEEEEEECC---
T ss_pred --CCCCcchHHHH---------------------HHHHHhhhhchhhHHHHHHHhcCCCEEEEcChHHhc
Confidence 34689999852 124445555555555888889998866533 33544
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.82 E-value=1e-08 Score=93.50 Aligned_cols=87 Identities=18% Similarity=0.216 Sum_probs=71.2
Q ss_pred hHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhh
Q psy15212 120 AAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYI 199 (329)
Q Consensus 120 ~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~ 199 (329)
...-++..+++.+| +|||+|||+|..|..+++.. .+|+|+|+|+.+++.+++++.. -+++++++|+.+++.+
T Consensus 35 i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~--~~v~vi~~D~l~~~~~---- 106 (271)
T 3fut_A 35 HLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSG--LPVRLVFQDALLYPWE---- 106 (271)
T ss_dssp HHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTT--SSEEEEESCGGGSCGG----
T ss_pred HHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCC--CCEEEEECChhhCChh----
Confidence 34445566778889 99999999999999999875 6999999999999999998862 3489999999887511
Q ss_pred hhcccccccccccCCCCCCEEEEccCCc
Q psy15212 200 DINKKTNNRFRFYKNKYFDRILADLPCT 227 (329)
Q Consensus 200 ~~~~~~~~~~~~~~~~~fD~Vl~D~PCs 227 (329)
....+|.|+.|+|+.
T Consensus 107 -------------~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 107 -------------EVPQGSLLVANLPYH 121 (271)
T ss_dssp -------------GSCTTEEEEEEECSS
T ss_pred -------------hccCccEEEecCccc
Confidence 112689999999986
No 266
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.81 E-value=6.6e-09 Score=92.82 Aligned_cols=123 Identities=12% Similarity=0.097 Sum_probs=76.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-----CEEEEEeC--ChhHHHHHHHHHHHcCCc-eEEEec-Cccccchhhhhhh
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-----IKLISVDN--NLSRLNMISENLKRLNLK-ATLILS-DISKINLKKLYID 200 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-----~~v~avD~--~~~rl~~l~~n~~~~g~~-v~~~~~-D~~~~~~~~~~~~ 200 (329)
++||.+|+|+|||||+.+..++++.+ +.++|+|+ .+-.. ...|+. +.+..+ |++.+.
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~Gv~~i~~~~G~Df~~~~------- 136 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSYGWNIVTMKSGVDVFYKP------- 136 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CSTTGGGEEEECSCCGGGSC-------
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCCCceEEEeeccCCccCCC-------
Confidence 67899999999999999999998733 46667772 21110 003444 455556 887643
Q ss_pred hcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCC-EEEEEcCCCC
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG-KLLFVTCSLW 279 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG-~lvysTCS~~ 279 (329)
+.++|+||+|.--+ +|.. .+.+...+. .|+-|.++|+||| .+|. -++
T Consensus 137 -------------~~~~DvVLSDMAPn-SG~~-------------~vD~~Rs~~--aL~~A~~~Lk~gG~~Fvv---KVF 184 (269)
T 2px2_A 137 -------------SEISDTLLCDIGES-SPSA-------------EIEEQRTLR--ILEMVSDWLSRGPKEFCI---KIL 184 (269)
T ss_dssp -------------CCCCSEEEECCCCC-CSCH-------------HHHHHHHHH--HHHHHHHHHTTCCSEEEE---EES
T ss_pred -------------CCCCCEEEeCCCCC-CCcc-------------HHHHHHHHH--HHHHHHHHhhcCCcEEEE---EEC
Confidence 45899999997555 5541 122221111 6788889999999 7773 444
Q ss_pred ccccHHHHH---HHHhhCCCcE
Q psy15212 280 FEESEEQAI---IFSKNHKDSI 298 (329)
Q Consensus 280 ~~Ene~vv~---~~l~~~~~~~ 298 (329)
...-+++.+ .+-..+....
T Consensus 185 qg~~~~~~~~l~~lk~~F~~vk 206 (269)
T 2px2_A 185 CPYMPKVIEKLESLQRRFGGGL 206 (269)
T ss_dssp CTTSHHHHHHHHHHHHHHCCEE
T ss_pred CCCchHHHHHHHHHHHHcCCEE
Confidence 443344433 4444444433
No 267
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.78 E-value=3.2e-09 Score=102.13 Aligned_cols=129 Identities=10% Similarity=0.108 Sum_probs=87.1
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceE---EEecCccccchhhhhhhhcc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKAT---LILSDISKINLKKLYIDINK 203 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~---~~~~D~~~~~~~~~~~~~~~ 203 (329)
.+.+.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.++++ ++... +...++..++
T Consensus 102 ~~~~~~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~---------- 166 (416)
T 4e2x_A 102 TELTGPDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVR---------- 166 (416)
T ss_dssp TTTCSSSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHH----------
T ss_pred HhCCCCCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcc----------
Confidence 345678899999999999999999985 45999999999999988766 44421 1112222221
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC------
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS------ 277 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS------ 277 (329)
+.+++||+|++. +++.+-++ ...+|+.+.++|||||++++++-.
T Consensus 167 --------~~~~~fD~I~~~------~vl~h~~d----------------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~ 216 (416)
T 4e2x_A 167 --------RTEGPANVIYAA------NTLCHIPY----------------VQSVLEGVDALLAPDGVFVFEDPYLGDIVA 216 (416)
T ss_dssp --------HHHCCEEEEEEE------SCGGGCTT----------------HHHHHHHHHHHEEEEEEEEEEEECHHHHHH
T ss_pred --------cCCCCEEEEEEC------ChHHhcCC----------------HHHHHHHHHHHcCCCeEEEEEeCChHHhhh
Confidence 134789999963 33333322 356899999999999999987532
Q ss_pred ------C----CccccHHHHHHHHhhCCCcEEec
Q psy15212 278 ------L----WFEESEEQAIIFSKNHKDSIRLN 301 (329)
Q Consensus 278 ------~----~~~Ene~vv~~~l~~~~~~~~~~ 301 (329)
+ ...-+.+.+..+++++ +|+.+.
T Consensus 217 ~~~~~~~~~~~~~~~s~~~l~~ll~~a-Gf~~~~ 249 (416)
T 4e2x_A 217 KTSFDQIFDEHFFLFSATSVQGMAQRC-GFELVD 249 (416)
T ss_dssp HTCGGGCSTTCCEECCHHHHHHHHHHT-TEEEEE
T ss_pred hcchhhhhhhhhhcCCHHHHHHHHHHc-CCEEEE
Confidence 1 0112445667777766 666554
No 268
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.77 E-value=6.1e-08 Score=84.44 Aligned_cols=129 Identities=16% Similarity=0.075 Sum_probs=85.0
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC--c--eEEEecCccccchhhhhhhhccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL--K--ATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~--~--v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.+..+||++|+ |.-|+.+|++.+++|+++|.+++..+.+++++++.|+ . ++++.+|+.... .+.-+.+...-
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~--~wg~p~~~~~~ 104 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTG--DWGHPVSDAKW 104 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBC--GGGCBSSSTTG
T ss_pred hCCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhh--cccccccchhh
Confidence 34679999997 6777778874358999999999999999999999997 3 889999976431 00000000000
Q ss_pred cccc--------ccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 207 NRFR--------FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 207 ~~~~--------~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
..+. ....+.||+|++|+.-. ...+..+.++|+|||+|+.-..+.
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k~---------------------------~~~~~~~l~~l~~GG~Iv~DNv~~ 157 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRFR---------------------------VGCALATAFSITRPVTLLFDDYSQ 157 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSSH---------------------------HHHHHHHHHHCSSCEEEEETTGGG
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCCc---------------------------hhHHHHHHHhcCCCeEEEEeCCcC
Confidence 0000 00136899999998511 134555778999999998765443
Q ss_pred CccccHHHHHHHHh
Q psy15212 279 WFEESEEQAIIFSK 292 (329)
Q Consensus 279 ~~~Ene~vv~~~l~ 292 (329)
.+ ....+..|++
T Consensus 158 r~--~y~~v~~~~~ 169 (202)
T 3cvo_A 158 RR--WQHQVEEFLG 169 (202)
T ss_dssp CS--SGGGGHHHHC
T ss_pred Cc--chHHHHHHHh
Confidence 43 3345667765
No 269
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.77 E-value=1.4e-08 Score=92.75 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=74.2
Q ss_pred CCCeEEeecCCCch----HHHHHHHhCC-----CEEEEEeCChhHHHHHHHHHH--------------Hc---------C
Q psy15212 132 SGMYVLDACSAPGG----KTCHLLEIAD-----IKLISVDNNLSRLNMISENLK--------------RL---------N 179 (329)
Q Consensus 132 ~g~~VLDlcag~G~----kt~~la~~~~-----~~v~avD~~~~rl~~l~~n~~--------------~~---------g 179 (329)
++.+|||+|||+|. .+..+++..+ .+|+|+|+|+.+++.+++++- ++ |
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999998 5556666533 389999999999999998741 10 1
Q ss_pred ---C------ceEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH
Q psy15212 180 ---L------KATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL 250 (329)
Q Consensus 180 ---~------~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l 250 (329)
+ .+.+..+|+...+ +...+.||+|+| . .++ .| ..+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~-----------------~~~~~~fDlI~c----r--nvl------iy-f~~------ 228 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQ-----------------YNVPGPFDAIFC----R--NVM------IY-FDK------ 228 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSS-----------------CCCCCCEEEEEE----C--SSG------GG-SCH------
T ss_pred ceeechhhcccCeEEecccCCCC-----------------CCcCCCeeEEEE----C--Cch------Hh-CCH------
Confidence 1 2677788877632 111368999997 1 121 11 111
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 251 SKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 251 ~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
..|.++++...+.|+|||+|+..
T Consensus 229 -~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 229 -TTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp -HHHHHHHHHHGGGEEEEEEEEEC
T ss_pred -HHHHHHHHHHHHHhCCCcEEEEE
Confidence 23688999999999999999975
No 270
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.75 E-value=8.2e-09 Score=98.59 Aligned_cols=102 Identities=15% Similarity=0.145 Sum_probs=72.8
Q ss_pred CCCeEEeecCC------CchHHHHHHHhC-C-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcc
Q psy15212 132 SGMYVLDACSA------PGGKTCHLLEIA-D-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 132 ~g~~VLDlcag------~G~kt~~la~~~-~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
++.+|||+||| +|+.++.+++.. + ++|+|+|+|+.+. ...-+++++++|+.+++...-
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~~~rI~fv~GDa~dlpf~~~------ 281 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VDELRIRTIQGDQNDAEFLDR------ 281 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GCBTTEEEEECCTTCHHHHHH------
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hcCCCcEEEEecccccchhhh------
Confidence 46799999999 788888888653 3 7999999999973 122248999999988641100
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
+ ....+.||+|++|.- + + ...+...|+.++++|||||+++++..
T Consensus 282 -----l-~~~d~sFDlVisdgs--------H-----~----------~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 282 -----I-ARRYGPFDIVIDDGS--------H-----I----------NAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp -----H-HHHHCCEEEEEECSC--------C-----C----------HHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred -----h-hcccCCccEEEECCc--------c-----c----------chhHHHHHHHHHHhcCCCeEEEEEec
Confidence 0 001368999997631 0 0 01245689999999999999999864
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.67 E-value=3.8e-08 Score=88.64 Aligned_cols=88 Identities=20% Similarity=0.235 Sum_probs=68.7
Q ss_pred hHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhh
Q psy15212 120 AAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYI 199 (329)
Q Consensus 120 ~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~ 199 (329)
....++..+++.++++|||+|||+|..|..+++....+|+|+|+|+.+++.++++ ...+++++++|+.+++.+.
T Consensus 19 i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~~~~v~~i~~D~~~~~~~~--- 92 (249)
T 3ftd_A 19 VLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---GDERLEVINEDASKFPFCS--- 92 (249)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---CCTTEEEECSCTTTCCGGG---
T ss_pred HHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---cCCCeEEEEcchhhCChhH---
Confidence 3444556667888999999999999999999987337999999999999999987 2334899999998875211
Q ss_pred hhcccccccccccCCCCCCEEEEccCCc
Q psy15212 200 DINKKTNNRFRFYKNKYFDRILADLPCT 227 (329)
Q Consensus 200 ~~~~~~~~~~~~~~~~~fD~Vl~D~PCs 227 (329)
. ...| .|+.|+|+.
T Consensus 93 ------------~-~~~~-~vv~NlPy~ 106 (249)
T 3ftd_A 93 ------------L-GKEL-KVVGNLPYN 106 (249)
T ss_dssp ------------S-CSSE-EEEEECCTT
T ss_pred ------------c-cCCc-EEEEECchh
Confidence 0 1234 899999986
No 272
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.65 E-value=5.3e-08 Score=89.13 Aligned_cols=89 Identities=12% Similarity=0.147 Sum_probs=68.9
Q ss_pred HHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCE----EEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhh
Q psy15212 121 AQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIK----LISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKK 196 (329)
Q Consensus 121 s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~----v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~ 196 (329)
...++..+++.++++|||+|||+|..|..+++... . |+|+|+|+.+++.++++. .-.++++++|+.+++.+.
T Consensus 31 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~---~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 31 IDAIVAAIRPERGERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRF---GELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHH---GGGEEEEESCGGGCCGGG
T ss_pred HHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhc---CCCcEEEECChhcCChhH
Confidence 34455666788999999999999999999998754 5 999999999999999993 234899999999876221
Q ss_pred hhhhhcccccccccccCCC--CCCEEEEccCCc
Q psy15212 197 LYIDINKKTNNRFRFYKNK--YFDRILADLPCT 227 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~--~fD~Vl~D~PCs 227 (329)
+ .... ..+.|+.++|+.
T Consensus 107 ~--------------~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 107 I--------------ARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp G--------------SCSSSSCCEEEEEECCHH
T ss_pred h--------------cccccCCceEEEEccCcc
Confidence 1 1101 345899999976
No 273
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.63 E-value=3.9e-08 Score=92.48 Aligned_cols=107 Identities=16% Similarity=0.181 Sum_probs=76.0
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
.++..++.+|||+|||+|..+..+++..+ .+++++|+ +..+. +++++..+.. ++++.+|+....
T Consensus 179 ~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~---------- 245 (348)
T 3lst_A 179 AGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREV---------- 245 (348)
T ss_dssp HSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCC----------
T ss_pred hCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCC----------
Confidence 44567788999999999999999999877 68999999 44443 3333334443 889999987321
Q ss_pred cccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+ .||+|++-- ++. .+...+ ..++|+++.+.|||||+|+.....
T Consensus 246 ---------p--~~D~v~~~~------vlh-------~~~d~~-------~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 246 ---------P--HADVHVLKR------ILH-------NWGDED-------SVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp ---------C--CCSEEEEES------CGG-------GSCHHH-------HHHHHHHHHHTCCTTCEEEEEECC
T ss_pred ---------C--CCcEEEEeh------hcc-------CCCHHH-------HHHHHHHHHHhcCCCCEEEEEEec
Confidence 2 799998521 221 112211 246899999999999999987654
No 274
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.63 E-value=7.5e-08 Score=87.67 Aligned_cols=114 Identities=17% Similarity=0.156 Sum_probs=76.4
Q ss_pred CCeEEeecCCC--chHHHHHHHh-CC-CEEEEEeCChhHHHHHHHHHHHcCC-ceEEEecCccccchhhhhhhhcccccc
Q psy15212 133 GMYVLDACSAP--GGKTCHLLEI-AD-IKLISVDNNLSRLNMISENLKRLNL-KATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 133 g~~VLDlcag~--G~kt~~la~~-~~-~~v~avD~~~~rl~~l~~n~~~~g~-~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
..+|||+|||. |+.+..+++. .+ ++|+++|.|+.+++.+++++...+. .++++.+|++.+.. +. . . .
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~--~l-~-~----~ 150 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPAS--IL-D-A----P 150 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHH--HH-T-C----H
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhh--hh-c-c----c
Confidence 36899999997 5566767664 34 7999999999999999999876543 38899999988530 00 0 0 0
Q ss_pred cccccCCCCCC-----EEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 208 RFRFYKNKYFD-----RILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 208 ~~~~~~~~~fD-----~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
...+.|| .|+++ +++..-++ .++ +..++++..+.|+|||+|+.++-+
T Consensus 151 ----~~~~~~D~~~p~av~~~------avLH~l~d------~~~-------p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 151 ----ELRDTLDLTRPVALTVI------AIVHFVLD------EDD-------AVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp ----HHHTTCCTTSCCEEEEE------SCGGGSCG------GGC-------HHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred ----ccccccCcCCcchHHhh------hhHhcCCc------hhh-------HHHHHHHHHHhCCCCcEEEEEecc
Confidence 0012343 45542 33332222 111 246899999999999999999754
No 275
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.62 E-value=3.8e-07 Score=83.73 Aligned_cols=135 Identities=16% Similarity=0.172 Sum_probs=93.7
Q ss_pred cCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHc--CC----ceEEEecCccccchhhhhhh
Q psy15212 128 LDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRL--NL----KATLILSDISKINLKKLYID 200 (329)
Q Consensus 128 l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~--g~----~v~~~~~D~~~~~~~~~~~~ 200 (329)
+.+.| .+||=+|.|.|+.+-.+++..+ .+|+.||+++..++.+++-+... +. +++++.+|+..+-
T Consensus 80 ~~p~p-k~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l------- 151 (294)
T 3o4f_A 80 AHGHA-KHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV------- 151 (294)
T ss_dssp HSSCC-CEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTT-------
T ss_pred hCCCC-CeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHH-------
Confidence 34444 5999999999999999997655 69999999999999999887542 21 2899999999864
Q ss_pred hcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc--CCC
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT--CSL 278 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT--CS~ 278 (329)
. ...++||+|++|.+-. .|. +...+ ..++++.+.+.|+|||.++.-+ +.+
T Consensus 152 ---------~-~~~~~yDvIi~D~~dp-~~~----~~~L~-------------t~eFy~~~~~~L~p~Gv~v~q~~sp~~ 203 (294)
T 3o4f_A 152 ---------N-QTSQTFDVIISDCTDP-IGP----GESLF-------------TSAFYEGCKRCLNPGGIFVAQNGVCFL 203 (294)
T ss_dssp ---------S-CSSCCEEEEEESCCCC-CCT----TCCSS-------------CCHHHHHHHHTEEEEEEEEEEEEESSS
T ss_pred ---------h-hccccCCEEEEeCCCc-CCC----chhhc-------------CHHHHHHHHHHhCCCCEEEEecCCccc
Confidence 1 1346899999998742 111 11111 2357888899999999998643 334
Q ss_pred CccccHHHHHHHHhhCCCcE
Q psy15212 279 WFEESEEQAIIFSKNHKDSI 298 (329)
Q Consensus 279 ~~~Ene~vv~~~l~~~~~~~ 298 (329)
+++.-..+.+.+-+-.+...
T Consensus 204 ~~~~~~~~~~~l~~~F~~v~ 223 (294)
T 3o4f_A 204 QQEEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp CCHHHHHHHHHHHHHCSEEE
T ss_pred ChHHHHHHHHHHHhhCCcee
Confidence 44433444444444455443
No 276
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.62 E-value=3.5e-08 Score=89.76 Aligned_cols=88 Identities=24% Similarity=0.285 Sum_probs=71.0
Q ss_pred HhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcc
Q psy15212 124 AAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINK 203 (329)
Q Consensus 124 ~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~ 203 (329)
+...|.+++|..++|++||.||.|..+++. +++|+|+|.++..++.+++ ++. -.++++++|+.++.. .+
T Consensus 14 ~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~--~rv~lv~~~f~~l~~-~L------ 82 (285)
T 1wg8_A 14 ALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL--PGLTVVQGNFRHLKR-HL------ 82 (285)
T ss_dssp HHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC--TTEEEEESCGGGHHH-HH------
T ss_pred HHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc--CCEEEEECCcchHHH-HH------
Confidence 345667889999999999999999999998 6799999999999999998 654 248999999988640 00
Q ss_pred cccccccccCCCCCCEEEEccCCcc
Q psy15212 204 KTNNRFRFYKNKYFDRILADLPCTG 228 (329)
Q Consensus 204 ~~~~~~~~~~~~~fD~Vl~D~PCsg 228 (329)
......+||.|++|..+|+
T Consensus 83 ------~~~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 83 ------AALGVERVDGILADLGVSS 101 (285)
T ss_dssp ------HHTTCSCEEEEEEECSCCH
T ss_pred ------HHcCCCCcCEEEeCCcccc
Confidence 0012257999999999887
No 277
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.59 E-value=5.3e-07 Score=85.03 Aligned_cols=112 Identities=14% Similarity=0.120 Sum_probs=82.8
Q ss_pred hcCCCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccchhhhhhhhccc
Q psy15212 127 LLDIRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKINLKKLYIDINKK 204 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~~~~~~~~~~~~ 204 (329)
.++..+..+|+|+|||+|..+..+++..+ .+++..|. +..++.+++++...+.. ++++.+|+...+
T Consensus 174 ~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~----------- 241 (353)
T 4a6d_A 174 AFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP----------- 241 (353)
T ss_dssp SSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC-----------
T ss_pred hcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC-----------
Confidence 33556678999999999999999999988 68888997 88899999888765554 899999987543
Q ss_pred ccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 205 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 205 ~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
...+|+|++- .++ ..|..++ -.++|+++.+.|+|||+|+....-+.
T Consensus 242 ---------~~~~D~~~~~------~vl-------h~~~d~~-------~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 242 ---------LPEADLYILA------RVL-------HDWADGK-------CSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp ---------CCCCSEEEEE------SSG-------GGSCHHH-------HHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred ---------CCCceEEEee------eec-------ccCCHHH-------HHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 2357999851 111 1233333 24689999999999999988765443
No 278
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.53 E-value=6.6e-08 Score=87.21 Aligned_cols=89 Identities=12% Similarity=0.059 Sum_probs=67.0
Q ss_pred HHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCE--EEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhh
Q psy15212 122 QLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIK--LISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYI 199 (329)
Q Consensus 122 ~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~--v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~ 199 (329)
..++..+++.+|++|||+|||+|..|. ++. . .+ |+|+|+|+.+++.+++++...+ .++++++|+.+++.+..
T Consensus 11 ~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~-~v~~i~~D~~~~~~~~~-- 84 (252)
T 1qyr_A 11 DSIVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGP-KLTIYQQDAMTFNFGEL-- 84 (252)
T ss_dssp HHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGG-GEEEECSCGGGCCHHHH--
T ss_pred HHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCC-ceEEEECchhhCCHHHh--
Confidence 334555678899999999999999999 654 3 46 9999999999999998876431 48999999988652211
Q ss_pred hhcccccccccccC-CCCCCEEEEccCCcc
Q psy15212 200 DINKKTNNRFRFYK-NKYFDRILADLPCTG 228 (329)
Q Consensus 200 ~~~~~~~~~~~~~~-~~~fD~Vl~D~PCsg 228 (329)
+. ....|.|+.++|+.-
T Consensus 85 ------------~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 85 ------------AEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp ------------HHHHTSCEEEEEECCTTT
T ss_pred ------------hcccCCceEEEECCCCCc
Confidence 00 124579999999863
No 279
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.50 E-value=2.2e-07 Score=93.28 Aligned_cols=74 Identities=16% Similarity=0.175 Sum_probs=63.0
Q ss_pred CCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcC-CceEEEecCccccchhhhhhhhccccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLN-LKATLILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
.+-+|||+|||.|..+..||++ |+.|+|+|.++..++.++......| +++++.++|+.++. .
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~----------------~ 128 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVI----------------A 128 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHH----------------H
T ss_pred CCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHh----------------h
Confidence 4569999999999999999975 6799999999999999999998887 46999999988763 1
Q ss_pred ccCCCCCCEEEE
Q psy15212 211 FYKNKYFDRILA 222 (329)
Q Consensus 211 ~~~~~~fD~Vl~ 222 (329)
...+++||+|+|
T Consensus 129 ~~~~~~fD~v~~ 140 (569)
T 4azs_A 129 ALEEGEFDLAIG 140 (569)
T ss_dssp HCCTTSCSEEEE
T ss_pred hccCCCccEEEE
Confidence 124578999994
No 280
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.46 E-value=2.2e-07 Score=84.02 Aligned_cols=128 Identities=17% Similarity=0.239 Sum_probs=85.1
Q ss_pred CCCCCeEEeecCCCchHHHHHHHh-------CC------CEEEEEeCCh---hHHH-----------HHHHHHHHc----
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEI-------AD------IKLISVDNNL---SRLN-----------MISENLKRL---- 178 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~-------~~------~~v~avD~~~---~rl~-----------~l~~n~~~~---- 178 (329)
.+++.+|||+|+|+|..++.+++. .+ .+++++|..+ +.+. .++++++.+
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 345679999999999999887764 22 3899999987 3333 556666652
Q ss_pred ----------C-CceEEEecCccccchhhhhhhhcccccccccccCC---CCCCEEEEcc--CCccccccccCCCCcccC
Q psy15212 179 ----------N-LKATLILSDISKINLKKLYIDINKKTNNRFRFYKN---KYFDRILADL--PCTGSGVVRRNPDIPWLR 242 (329)
Q Consensus 179 ----------g-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~---~~fD~Vl~D~--PCsg~G~~~~~p~~~~~~ 242 (329)
+ ..++++.+|+.+.- +.... ..||.|++|+ |+ ++|++ |
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l----------------~~~~~~~~~~~D~iflD~fsp~-------~~p~l-w-- 191 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELI----------------SQLDDSLNQKVDAWFLDGFAPA-------KNPDM-W-- 191 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHG----------------GGSCGGGTTCEEEEEECSSCTT-------TCGGG-C--
T ss_pred cchhheeccCCceEEEEEECcHHHHH----------------hhcccccCCeEEEEEECCCCcc-------cChhh-c--
Confidence 1 23678899988742 11111 3799999997 43 34532 2
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhCCCcEEecC
Q psy15212 243 RKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNS 302 (329)
Q Consensus 243 ~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~~~~~~~~~ 302 (329)
+.++++.+.+.|+|||+|+.-|++ ..|..-|... +|.+...
T Consensus 192 -----------~~~~l~~l~~~L~pGG~l~tysaa-------~~vrr~L~~a-GF~v~~~ 232 (257)
T 2qy6_A 192 -----------TQNLFNAMARLARPGGTLATFTSA-------GFVRRGLQEA-GFTMQKR 232 (257)
T ss_dssp -----------CHHHHHHHHHHEEEEEEEEESCCB-------HHHHHHHHHH-TEEEEEE
T ss_pred -----------CHHHHHHHHHHcCCCcEEEEEeCC-------HHHHHHHHHC-CCEEEeC
Confidence 246789999999999998843332 3566666664 6665543
No 281
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.45 E-value=9.2e-07 Score=83.81 Aligned_cols=103 Identities=15% Similarity=0.134 Sum_probs=74.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
..++.+|||+|||+|..+..+++..+ .+++++|+ +.+++.++++ -.++++.+|+.. +
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~--------------- 258 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-----SGVEHLGGDMFD-G--------------- 258 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-C---------------
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-----CCCEEEecCCCC-C---------------
Confidence 45678999999999999999999887 69999999 8777655432 238899999876 3
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 279 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~ 279 (329)
.+. . |+|++-- ++. .+..++ ..++|+++.+.|+|||+|+.....+.
T Consensus 259 ---~p~-~-D~v~~~~------vlh-------~~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 259 ---VPK-G-DAIFIKW------ICH-------DWSDEH-------CLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp ---CCC-C-SEEEEES------CGG-------GBCHHH-------HHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred ---CCC-C-CEEEEec------hhh-------cCCHHH-------HHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 122 2 9998522 111 122222 24689999999999999998776543
No 282
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.41 E-value=1.2e-06 Score=82.85 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=74.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
..++.+|||+|||+|..+..+++..+ .+++++|+ +..++.++++ -.++++.+|+.. +
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~D~~~-~--------------- 256 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-----PGVTHVGGDMFK-E--------------- 256 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-C---------------
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-----CCeEEEeCCcCC-C---------------
Confidence 55678999999999999999999887 79999999 7777655431 238899999876 3
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 278 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~ 278 (329)
.+. . |+|++-- ++ ..+..++ -.++|+++.+.|||||+|+.....+
T Consensus 257 ---~p~-~-D~v~~~~------vl-------h~~~d~~-------~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 257 ---VPS-G-DTILMKW------IL-------HDWSDQH-------CATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp ---CCC-C-SEEEEES------CG-------GGSCHHH-------HHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred ---CCC-C-CEEEehH------Hh-------ccCCHHH-------HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 122 2 9998521 11 1122222 2468999999999999999876554
No 283
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.36 E-value=6.2e-07 Score=84.95 Aligned_cols=100 Identities=17% Similarity=0.175 Sum_probs=73.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
..++.+|||+|||+|..+..+++..+ .+++++|+ +.+++.+++. -.++++.+|+.. +
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~--------------- 264 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-----SGIEHVGGDMFA-S--------------- 264 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-C---------------
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-----CCCEEEeCCccc-C---------------
Confidence 45678999999999999999999876 79999999 8888765541 128899999876 3
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.+ . ||+|++. .++.. +...+ ..++|+++.+.|+|||+|+.+..
T Consensus 265 ---~~-~-~D~v~~~------~~lh~-------~~d~~-------~~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 265 ---VP-Q-GDAMILK------AVCHN-------WSDEK-------CIEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp ---CC-C-EEEEEEE------SSGGG-------SCHHH-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CC-C-CCEEEEe------ccccc-------CCHHH-------HHHHHHHHHHhcCCCCEEEEEEe
Confidence 12 2 9999962 22211 11111 24689999999999999998753
No 284
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.35 E-value=1.6e-07 Score=79.10 Aligned_cols=93 Identities=22% Similarity=0.328 Sum_probs=66.8
Q ss_pred cCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccc
Q psy15212 128 LDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 128 l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
+++++|++|||+|||. +++|+|+.+++.++++... .++++.+|+..++.
T Consensus 8 ~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~------------- 56 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN---EGRVSVENIKQLLQ------------- 56 (176)
T ss_dssp TTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGG-------------
T ss_pred cCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc---CcEEEEechhcCcc-------------
Confidence 4578999999999986 1389999999999988643 27888899887650
Q ss_pred cccccCCCCCCEEEEccCCccccccccC-CCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRN-PDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~-p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
..+.++.||.|++.- ++... ++ ..++|+++.+.|||||+++++.
T Consensus 57 --~~~~~~~fD~V~~~~------~l~~~~~~----------------~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 57 --SAHKESSFDIILSGL------VPGSTTLH----------------SAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp --GCCCSSCEEEEEECC------STTCCCCC----------------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred --ccCCCCCEeEEEECC------hhhhcccC----------------HHHHHHHHHHHCCCCEEEEEEc
Confidence 001457899999621 11111 11 1457999999999999999853
No 285
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.32 E-value=1.2e-06 Score=82.23 Aligned_cols=102 Identities=16% Similarity=0.184 Sum_probs=74.7
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
..++.+|||+|||+|..+..+++..+ .+++++|+ +.+++.+++. -.++++.+|+.. +
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~--------------- 243 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-----NNLTYVGGDMFT-S--------------- 243 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-----TTEEEEECCTTT-C---------------
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-----CCcEEEeccccC-C---------------
Confidence 45678999999999999999999876 79999999 8888766541 128888999865 3
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCC---CCEEEEEcCCC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKP---GGKLLFVTCSL 278 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkp---gG~lvysTCS~ 278 (329)
.+ .||+|++-- ++. .+...+ ..++|+++.+.||| ||+|+......
T Consensus 244 ---~p--~~D~v~~~~------~lh-------~~~d~~-------~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 244 ---IP--NADAVLLKY------ILH-------NWTDKD-------CLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp ---CC--CCSEEEEES------CGG-------GSCHHH-------HHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred ---CC--CccEEEeeh------hhc-------cCCHHH-------HHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 12 399999621 221 111111 24689999999999 99998876543
No 286
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.30 E-value=1.9e-06 Score=81.26 Aligned_cols=75 Identities=23% Similarity=0.308 Sum_probs=56.1
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
+++|++|||+||+|||+|..++++ +++|+|||+.+-. ..+... -.|+++.+|+....
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~l~-----~~l~~~-~~V~~~~~d~~~~~---------------- 265 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGPMA-----QSLMDT-GQVTWLREDGFKFR---------------- 265 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSCCC-----HHHHTT-TCEEEECSCTTTCC----------------
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhhcC-----hhhccC-CCeEEEeCcccccc----------------
Confidence 578999999999999999999986 4699999975411 112111 12788899988765
Q ss_pred cccCCCCCCEEEEccCCccc
Q psy15212 210 RFYKNKYFDRILADLPCTGS 229 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~ 229 (329)
.....||.|+||.-+.-+
T Consensus 266 --~~~~~~D~vvsDm~~~p~ 283 (375)
T 4auk_A 266 --PTRSNISWMVCDMVEKPA 283 (375)
T ss_dssp --CCSSCEEEEEECCSSCHH
T ss_pred --CCCCCcCEEEEcCCCChH
Confidence 234689999999977633
No 287
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.29 E-value=1.1e-06 Score=77.42 Aligned_cols=119 Identities=12% Similarity=0.096 Sum_probs=76.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEec-Cccccchhhhhhhhccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILS-DISKINLKKLYIDINKKTN 206 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~-D~~~~~~~~~~~~~~~~~~ 206 (329)
++++..|||+||||||.+-.++...+ .+|+|+|+-..--+. -..++.+|-+ +++..+ |...+.
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~------------- 141 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLP------------- 141 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCC-------------
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecC-------------
Confidence 57889999999999999998988777 689999996543210 0112356666 788877 875543
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHH
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQ 286 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~v 286 (329)
...+|.||||--=| +|. |. -+.... .+.|+-+.++|++ |.++ |-++.-+..++
T Consensus 142 -------~~~~DtllcDIgeS-s~~----~~------vE~~Rt-----lrvLela~~wL~~-~~fc---~KVl~py~p~v 194 (267)
T 3p8z_A 142 -------PEKCDTLLCDIGES-SPS----PT------VEESRT-----IRVLKMVEPWLKN-NQFC---IKVLNPYMPTV 194 (267)
T ss_dssp -------CCCCSEEEECCCCC-CSC----HH------HHHHHH-----HHHHHHHGGGCSS-CEEE---EEESCCCSHHH
T ss_pred -------CccccEEEEecCCC-CCC----hh------hhhhHH-----HHHHHHHHHhccc-CCEE---EEEccCCChhH
Confidence 36799999995422 111 00 011111 2278888899998 6665 45554555455
Q ss_pred HHH
Q psy15212 287 AII 289 (329)
Q Consensus 287 v~~ 289 (329)
++.
T Consensus 195 ~e~ 197 (267)
T 3p8z_A 195 IEH 197 (267)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.26 E-value=5e-06 Score=75.97 Aligned_cols=121 Identities=11% Similarity=0.073 Sum_probs=90.9
Q ss_pred CeEEeecCCCchHHHHHHHhC------CCEEEEEeCCh--------------------------hHHHHHHHHHHHcCC-
Q psy15212 134 MYVLDACSAPGGKTCHLLEIA------DIKLISVDNNL--------------------------SRLNMISENLKRLNL- 180 (329)
Q Consensus 134 ~~VLDlcag~G~kt~~la~~~------~~~v~avD~~~--------------------------~rl~~l~~n~~~~g~- 180 (329)
..||++|++.|+-++.+|+.+ +++|+++|..+ .+++.+++|+++.|+
T Consensus 108 g~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl~ 187 (282)
T 2wk1_A 108 GDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDLL 187 (282)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTCC
T ss_pred CcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCCC
Confidence 499999999999999988754 36999999742 157889999999998
Q ss_pred -c-eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHH
Q psy15212 181 -K-ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKIL 258 (329)
Q Consensus 181 -~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL 258 (329)
+ ++++.+|+.+.- +....++||.|.+|+--. .-....|
T Consensus 188 ~~~I~li~Gda~etL----------------~~~~~~~~d~vfIDaD~y------------------------~~~~~~L 227 (282)
T 2wk1_A 188 DEQVRFLPGWFKDTL----------------PTAPIDTLAVLRMDGDLY------------------------ESTWDTL 227 (282)
T ss_dssp STTEEEEESCHHHHS----------------TTCCCCCEEEEEECCCSH------------------------HHHHHHH
T ss_pred cCceEEEEeCHHHHH----------------hhCCCCCEEEEEEcCCcc------------------------ccHHHHH
Confidence 3 999999987642 112346899999997310 0124578
Q ss_pred HHHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhCC
Q psy15212 259 NNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHK 295 (329)
Q Consensus 259 ~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~~ 295 (329)
+.++..|+|||.++.-...+.+.+ ...+..|+++++
T Consensus 228 e~~~p~L~pGGiIv~DD~~~~~G~-~~Av~Ef~~~~~ 263 (282)
T 2wk1_A 228 TNLYPKVSVGGYVIVDDYMMCPPC-KDAVDEYRAKFD 263 (282)
T ss_dssp HHHGGGEEEEEEEEESSCTTCHHH-HHHHHHHHHHTT
T ss_pred HHHHhhcCCCEEEEEcCCCCCHHH-HHHHHHHHHhcC
Confidence 889999999999998776444544 456777777763
No 289
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.24 E-value=2.3e-06 Score=81.08 Aligned_cols=159 Identities=15% Similarity=0.201 Sum_probs=97.0
Q ss_pred ccccceEEEech----hHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHc-----
Q psy15212 108 KFFNGFCSIQDA----AAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRL----- 178 (329)
Q Consensus 108 ~~~~G~~~~Qd~----~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~----- 178 (329)
++.+|.+..-+. ..+++...+...+..+||=+|.|-|+.+..+++.-..+|+.||+++..++.+++-+...
T Consensus 177 L~LDG~~Q~te~D~~Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~ 256 (381)
T 3c6k_A 177 LILSGDVNLAESDLAYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVL 256 (381)
T ss_dssp EEETTEEEEETTCHHHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CC
T ss_pred EEECCceeeeCChHHHHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhh
Confidence 344565544322 23444333333345799999999999999988754479999999999999999865321
Q ss_pred CC----ceEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHH
Q psy15212 179 NL----KATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYS 254 (329)
Q Consensus 179 g~----~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q 254 (329)
.. .++++.+|+..+- ++. .-..++||+|++|.+-...+. .|. . .......
T Consensus 257 d~pr~~rv~vii~Da~~fl-~~~-------------~~~~~~yDvIIvDl~D~~~s~---~p~--------g-~a~~Lft 310 (381)
T 3c6k_A 257 DNLKGDCYQVLIEDCIPVL-KRY-------------AKEGREFDYVINDLTAVPIST---SPE--------E-DSTWEFL 310 (381)
T ss_dssp SSSEETTEEEEESCHHHHH-HHH-------------HHHTCCEEEEEEECCSSCCCC---C-------------CHHHHH
T ss_pred ccccccceeeehHHHHHHH-Hhh-------------hhccCceeEEEECCCCCcccC---ccc--------C-cchHHHH
Confidence 11 1688999988753 100 002358999999976321111 010 0 0011235
Q ss_pred HHHHHHHHhcCCCCCEEEE-EcCCCCccccHHHHHHHHhh
Q psy15212 255 CKILNNLWKMLKPGGKLLF-VTCSLWFEESEEQAIIFSKN 293 (329)
Q Consensus 255 ~~lL~~a~~~LkpgG~lvy-sTCS~~~~Ene~vv~~~l~~ 293 (329)
+++++.+.+.|+|||.++. +.|-+.. +.-..+...+++
T Consensus 311 ~eFy~~~~~~L~p~GVlv~Q~~s~~~~-~~~~~i~~tl~~ 349 (381)
T 3c6k_A 311 RLILDLSMKVLKQDGKYFTQGNCVNLT-EALSLYEEQLGR 349 (381)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEEETTCH-HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCcch-hHHHHHHHHHHH
Confidence 6789999999999999886 3444443 332334444444
No 290
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.23 E-value=4e-06 Score=84.57 Aligned_cols=117 Identities=21% Similarity=0.109 Sum_probs=82.6
Q ss_pred CCeEEeecCCCchH---HHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhhhhhhhcccc
Q psy15212 133 GMYVLDACSAPGGK---TCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKKLYIDINKKT 205 (329)
Q Consensus 133 g~~VLDlcag~G~k---t~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~~~~~~~~~~ 205 (329)
+..|||+|||+|-. ++.+++..+ .+|+|||.|+ +...+++..+.+|.. |+++.+|+++..
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~------------ 424 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWV------------ 424 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCC------------
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceecc------------
Confidence 34799999999988 555555554 3899999997 566778888888886 999999999876
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC--cccc
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW--FEES 283 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~--~~En 283 (329)
.++++|+|+...= |...+ .+. ..+.|.++-++|||||.++=+.|+++ +-+.
T Consensus 425 -------LPEKVDIIVSEwM--G~fLl-----------~E~-------mlevL~Ardr~LKPgGimiPs~atlyiapi~~ 477 (637)
T 4gqb_A 425 -------APEKADIIVSELL--GSFAD-----------NEL-------SPECLDGAQHFLKDDGVSIPGEYTSFLAPISS 477 (637)
T ss_dssp -------CSSCEEEEECCCC--BTTBG-----------GGC-------HHHHHHHHGGGEEEEEEEESCEEEEEEEEEEC
T ss_pred -------CCcccCEEEEEcC--ccccc-----------ccC-------CHHHHHHHHHhcCCCcEEccccceEEEEEecC
Confidence 3478999995421 11111 011 12467788899999999986666644 4455
Q ss_pred HHHHHH
Q psy15212 284 EEQAII 289 (329)
Q Consensus 284 e~vv~~ 289 (329)
+..-..
T Consensus 478 ~~l~~e 483 (637)
T 4gqb_A 478 SKLYNE 483 (637)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 291
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.19 E-value=1.3e-06 Score=79.44 Aligned_cols=79 Identities=13% Similarity=-0.056 Sum_probs=62.1
Q ss_pred CCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRFY 212 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
+..+||+++|+|..+..++... .+++.+|.++..++.+++|++. .-+++++..|+...- ..+ ..
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~-~~~~~V~~~D~~~~L-~~l-------------~~ 155 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHF-NKKVYVNHTDGVSKL-NAL-------------LP 155 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCT-TSCEEEECSCHHHHH-HHH-------------CS
T ss_pred CCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCc-CCcEEEEeCcHHHHH-HHh-------------cC
Confidence 5679999999999999988733 6999999999999999999976 223899999976532 110 01
Q ss_pred CCCCCCEEEEccCCc
Q psy15212 213 KNKYFDRILADLPCT 227 (329)
Q Consensus 213 ~~~~fD~Vl~D~PCs 227 (329)
...+||+|++|||+.
T Consensus 156 ~~~~fdLVfiDPPYe 170 (283)
T 2oo3_A 156 PPEKRGLIFIDPSYE 170 (283)
T ss_dssp CTTSCEEEEECCCCC
T ss_pred CCCCccEEEECCCCC
Confidence 234799999999976
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.18 E-value=9.2e-06 Score=73.83 Aligned_cols=127 Identities=10% Similarity=0.108 Sum_probs=77.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc-eEEEec-Cccccchhhhhhhhccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK-ATLILS-DISKINLKKLYIDINKKTN 206 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~-D~~~~~~~~~~~~~~~~~~ 206 (329)
++++..|||+||||||++..++...+ .+|+|+|+-..--+. -..++.++-+ +.+... |+..+.
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~~ql~w~lV~~~~~~Dv~~l~------------- 157 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLVQSYGWNIVTMKSGVDVFYRP------------- 157 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCCCBTTGGGEEEECSCCTTSSC-------------
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchhhhcCCcceEEEeccCHhhCC-------------
Confidence 56888999999999999998888777 689999996551100 0001233333 666665 766654
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCC-CEEEEEcCCCCccccHH
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG-GKLLFVTCSLWFEESEE 285 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkpg-G~lvysTCS~~~~Ene~ 285 (329)
...+|.|+||.- .++|.. . -+.... .+.|+-+.++|++| |.++ |-++.--.++
T Consensus 158 -------~~~~D~ivcDig-eSs~~~----~------ve~~Rt-----l~vLel~~~wL~~~~~~f~---~KVl~pY~~~ 211 (321)
T 3lkz_A 158 -------SECCDTLLCDIG-ESSSSA----E------VEEHRT-----IRVLEMVEDWLHRGPREFC---VKVLCPYMPK 211 (321)
T ss_dssp -------CCCCSEEEECCC-CCCSCH----H------HHHHHH-----HHHHHHHHHHHTTCCCEEE---EEESCTTSHH
T ss_pred -------CCCCCEEEEECc-cCCCCh----h------hhhhHH-----HHHHHHHHHHhccCCCcEE---EEEcCCCChH
Confidence 367999999987 323220 0 011111 12677788889988 8776 3433333334
Q ss_pred H---HHHHHhhCCC
Q psy15212 286 Q---AIIFSKNHKD 296 (329)
Q Consensus 286 v---v~~~l~~~~~ 296 (329)
+ ++.+-.++.+
T Consensus 212 v~e~l~~lq~~fgg 225 (321)
T 3lkz_A 212 VIEKMELLQRRYGG 225 (321)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCC
Confidence 4 4444445544
No 293
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.12 E-value=4.9e-06 Score=75.54 Aligned_cols=145 Identities=14% Similarity=0.102 Sum_probs=89.9
Q ss_pred CCCCCCeEEeecC------CCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhh
Q psy15212 129 DIRSGMYVLDACS------APGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYID 200 (329)
Q Consensus 129 ~~~~g~~VLDlca------g~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~ 200 (329)
.+..|++|||+|| +||+ ..+.+..+ +.|+++|+.+--. ....++.+|.....
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s-----------da~~~IqGD~~~~~------- 165 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS-----------DADSTLIGDCATVH------- 165 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC-----------SSSEEEESCGGGEE-------
T ss_pred eecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc-----------CCCeEEEccccccc-------
Confidence 3667999999997 9999 34455555 4999999966331 11245889976543
Q ss_pred hcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCc
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF 280 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~ 280 (329)
...+||+||.|.-...+|... .+.++ ...+ -...|+-|.+.|+|||.++. -++.
T Consensus 166 ------------~~~k~DLVISDMAPNtTG~~D-~d~~R----s~~L------~ElALdfA~~~LkpGGsFvV---KVFQ 219 (344)
T 3r24_A 166 ------------TANKWDLIISDMYDPRTKHVT-KENDS----KEGF------FTYLCGFIKQKLALGGSIAV---KITE 219 (344)
T ss_dssp ------------ESSCEEEEEECCCCTTSCSSC-SCCCC----CCTH------HHHHHHHHHHHEEEEEEEEE---EECS
T ss_pred ------------cCCCCCEEEecCCCCcCCccc-cchhH----HHHH------HHHHHHHHHHhCcCCCEEEE---EEec
Confidence 347899999999988888721 11111 1112 22357778889999999985 3444
Q ss_pred cccHHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCeEEEEEEEe
Q psy15212 281 EESEEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQK 326 (329)
Q Consensus 281 ~Ene~vv~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~gff~a~l~k 326 (329)
.+.++.+..+.+ .|..+.. +|...+....+-|.+++=.|
T Consensus 220 Gsg~~~L~~lrk---~F~~VK~----fK~ASRa~SsEvYLVG~gfK 258 (344)
T 3r24_A 220 HSWNADLYKLMG---HFSWWTA----FVTNVNASSSEAFLIGANYL 258 (344)
T ss_dssp SSCCHHHHHHHT---TEEEEEE----EEEGGGTTSSCEEEEEEEEC
T ss_pred CCCHHHHHHHHh---hCCeEEE----ECCCCCCCCeeEEEEeeecc
Confidence 444455555554 3443321 12122235667777776544
No 294
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.10 E-value=8.6e-06 Score=76.58 Aligned_cols=101 Identities=21% Similarity=0.230 Sum_probs=73.3
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
.++.+|||+|||+|..+..+++..+ .+++++|+ +..++.+++ . -.++++.+|+.. +
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~-~~v~~~~~d~~~-~---------------- 248 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----N-ENLNFVGGDMFK-S---------------- 248 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----C-SSEEEEECCTTT-C----------------
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----C-CCcEEEeCccCC-C----------------
Confidence 4568999999999999999999876 69999999 677765543 1 128888999876 3
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCC---CCEEEEEcCCC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKP---GGKLLFVTCSL 278 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkp---gG~lvysTCS~ 278 (329)
.+ .||+|++-- ++. .+...+ ..++|+++.+.|+| ||+|+......
T Consensus 249 --~~--~~D~v~~~~------vlh-------~~~d~~-------~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 249 --IP--SADAVLLKW------VLH-------DWNDEQ-------SLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp --CC--CCSEEEEES------CGG-------GSCHHH-------HHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred --CC--CceEEEEcc------ccc-------CCCHHH-------HHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 12 499999632 111 112111 24689999999999 99998876543
No 295
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.08 E-value=3.3e-05 Score=73.41 Aligned_cols=88 Identities=19% Similarity=0.263 Sum_probs=62.0
Q ss_pred CeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccccccC
Q psy15212 134 MYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRFYK 213 (329)
Q Consensus 134 ~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (329)
.+|+|+|||.||.++.+.+..-..|+|+|+++..++..+.|.. ...++.+|+.++....+.. ....
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~----~~~~~~~DI~~~~~~~~~~----------~~~~ 68 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP----RSLHVQEDVSLLNAEIIKG----------FFKN 68 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT----TSEEECCCGGGCCHHHHHH----------HHCS
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC----CCceEecChhhcCHHHHHh----------hccc
Confidence 4799999999999999887533467899999999999988853 2567888988764211100 0012
Q ss_pred CCCCCEEEEccCCccccccccC
Q psy15212 214 NKYFDRILADLPCTGSGVVRRN 235 (329)
Q Consensus 214 ~~~fD~Vl~D~PCsg~G~~~~~ 235 (329)
...+|+|+.+|||.+.....+.
T Consensus 69 ~~~~D~i~ggpPCQ~fS~ag~~ 90 (376)
T 3g7u_A 69 DMPIDGIIGGPPCQGFSSIGKG 90 (376)
T ss_dssp CCCCCEEEECCCCCTTC-----
T ss_pred CCCeeEEEecCCCCCcccccCC
Confidence 3579999999999888776543
No 296
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.91 E-value=1.5e-05 Score=80.78 Aligned_cols=124 Identities=16% Similarity=0.028 Sum_probs=81.3
Q ss_pred CCeEEeecCCCchHHHH---HHHhC-----------CCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccchhh
Q psy15212 133 GMYVLDACSAPGGKTCH---LLEIA-----------DIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKINLKK 196 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~---la~~~-----------~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~~~~ 196 (329)
+..|||+|||+|-.+.. +++.. ..+|+|||.++.....++.... +|.. |+++.+|++++.++.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 34799999999999643 33211 1499999999988877666654 5664 899999999876210
Q ss_pred hhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 197 LYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
. ....+++|+|+...- |.+. . -++.-++|..+-++|||||.++=+.|
T Consensus 489 -~------------~~~~ekVDIIVSElm----Gsfl----------~------nEL~pe~Ld~v~r~Lkp~Gi~iP~~~ 535 (745)
T 3ua3_A 489 -K------------DRGFEQPDIIVSELL----GSFG----------D------NELSPECLDGVTGFLKPTTISIPQKY 535 (745)
T ss_dssp -H------------HTTCCCCSEEEECCC----BTTB----------G------GGSHHHHHHTTGGGSCTTCEEESCEE
T ss_pred -c------------cCCCCcccEEEEecc----cccc----------c------hhccHHHHHHHHHhCCCCcEEECCcc
Confidence 0 001478999996543 2110 0 01234577878899999999986655
Q ss_pred CC--CccccHHHHHHH
Q psy15212 277 SL--WFEESEEQAIIF 290 (329)
Q Consensus 277 S~--~~~Ene~vv~~~ 290 (329)
++ .|-+....-+..
T Consensus 536 t~ylaPi~~~~l~~~v 551 (745)
T 3ua3_A 536 TSYVKPIMSTHIHQTI 551 (745)
T ss_dssp EEEEEEEECHHHHHHH
T ss_pred EEEEEEecCHHHHHHH
Confidence 53 355665544433
No 297
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.83 E-value=1.2e-05 Score=75.52 Aligned_cols=82 Identities=26% Similarity=0.339 Sum_probs=56.6
Q ss_pred CeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccccc
Q psy15212 134 MYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRF 211 (329)
Q Consensus 134 ~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
.+|+|++||.||.++.+.+... ..|+++|+++..++..+.|... ..++.+|+.++....
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~----~~~~~~Di~~~~~~~--------------- 63 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH----TQLLAKTIEGITLEE--------------- 63 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT----SCEECSCGGGCCHHH---------------
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc----cccccCCHHHccHhH---------------
Confidence 4799999999999999987642 3799999999999999999753 346778888764110
Q ss_pred cCCCCCCEEEEccCCcccccccc
Q psy15212 212 YKNKYFDRILADLPCTGSGVVRR 234 (329)
Q Consensus 212 ~~~~~fD~Vl~D~PCsg~G~~~~ 234 (329)
+....+|+|+.+|||.+..+..+
T Consensus 64 ~~~~~~D~l~~gpPCq~fS~ag~ 86 (343)
T 1g55_A 64 FDRLSFDMILMSPPCQPFTRIGR 86 (343)
T ss_dssp HHHHCCSEEEECCC---------
T ss_pred cCcCCcCEEEEcCCCcchhhcCC
Confidence 11126999999999988777644
No 298
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.83 E-value=4.7e-05 Score=71.05 Aligned_cols=79 Identities=18% Similarity=0.197 Sum_probs=61.3
Q ss_pred CCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRFY 212 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
+-+|+|+|||.||.++.+.+..-..|+++|+++..++..+.|..... .+|+.++.. .
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~------~~Di~~~~~----------------~- 67 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP------EGDITQVNE----------------K- 67 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC------BSCGGGSCG----------------G-
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC------cCCHHHcCH----------------h-
Confidence 46899999999999999886432578999999999999999975321 578777541 0
Q ss_pred CCCCCCEEEEccCCcccccccc
Q psy15212 213 KNKYFDRILADLPCTGSGVVRR 234 (329)
Q Consensus 213 ~~~~fD~Vl~D~PCsg~G~~~~ 234 (329)
.-..+|+|+.+|||.+....++
T Consensus 68 ~~~~~D~l~~gpPCQ~fS~ag~ 89 (327)
T 2c7p_A 68 TIPDHDILCAGFPCQAFSISGK 89 (327)
T ss_dssp GSCCCSEEEEECCCTTTCTTSC
T ss_pred hCCCCCEEEECCCCCCcchhcc
Confidence 1135999999999988777654
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.58 E-value=0.00015 Score=66.53 Aligned_cols=59 Identities=15% Similarity=0.094 Sum_probs=46.3
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCcc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDIS 190 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~ 190 (329)
.+|+.|||+|||+|..+..++. .+.+++++|+++..++.+++++++..-. ...+.+|+.
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~-~g~~~~g~e~~~~~~~~a~~r~~~~~~~~~~~~~~~~~ 293 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAAR-WGRRALGVELVPRYAQLAKERFAREVPGFSLEVLDGAT 293 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEECC--
T ss_pred CCCCEEEECCCCCCHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHHhccccchhhCCccc
Confidence 6799999999999999888776 4569999999999999999999876433 223344443
No 300
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.52 E-value=8.9e-05 Score=60.74 Aligned_cols=88 Identities=13% Similarity=0.138 Sum_probs=64.8
Q ss_pred CCCCCeEEeecCCCc-hHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 130 IRSGMYVLDACSAPG-GKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 130 ~~~g~~VLDlcag~G-~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
..++.+|||+|||+| ..+..|++..+..|+|+|+++..+. ++..|+.++.. .+
T Consensus 33 ~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~--------------~v~dDiF~P~~-~~----------- 86 (153)
T 2k4m_A 33 SGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG--------------IVRDDITSPRM-EI----------- 86 (153)
T ss_dssp SCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT--------------EECCCSSSCCH-HH-----------
T ss_pred CCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc--------------eEEccCCCCcc-cc-----------
Confidence 345679999999999 5889998766778999999998876 77888887541 00
Q ss_pred ccccCCCCCCEE-EEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 209 FRFYKNKYFDRI-LADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 209 ~~~~~~~~fD~V-l~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.+.||+| ...||- | +|..|++-|-+. |.-+++-+-
T Consensus 87 -----Y~~~DLIYsirPP~----------E---------------l~~~i~~lA~~v---~adliI~pL 122 (153)
T 2k4m_A 87 -----YRGAALIYSIRPPA----------E---------------IHSSLMRVADAV---GARLIIKPL 122 (153)
T ss_dssp -----HTTEEEEEEESCCT----------T---------------THHHHHHHHHHH---TCEEEEECB
T ss_pred -----cCCcCEEEEcCCCH----------H---------------HHHHHHHHHHHc---CCCEEEEcC
Confidence 1479999 888881 1 466677766554 566666543
No 301
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.31 E-value=0.00085 Score=61.55 Aligned_cols=84 Identities=14% Similarity=0.207 Sum_probs=62.5
Q ss_pred CCCCeEEeecCCCchHHHHHHHhCC-CE--EEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIAD-IK--LISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~~-~~--v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
..+-+|+|+|||.||.++.+.+. | .. |+++|+++..++..+.|.. ...++.+|..++....+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~----~~~~~~~DI~~i~~~~i---------- 78 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ----GKIMYVGDVRSVTQKHI---------- 78 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT----TCEEEECCGGGCCHHHH----------
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC----CCceeCCChHHccHHHh----------
Confidence 34568999999999999888764 4 33 7999999999998888753 23577889887651111
Q ss_pred cccccCCCCCCEEEEccCCccccccc
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVR 233 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~ 233 (329)
.....+|+|+..|||.+....+
T Consensus 79 ----~~~~~~Dll~ggpPCQ~fS~ag 100 (295)
T 2qrv_A 79 ----QEWGPFDLVIGGSPCNDLSIVN 100 (295)
T ss_dssp ----HHTCCCSEEEECCCCGGGBTTC
T ss_pred ----cccCCcCEEEecCCCccccccC
Confidence 0114699999999998877664
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.28 E-value=0.00034 Score=62.83 Aligned_cols=50 Identities=20% Similarity=0.191 Sum_probs=41.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCC
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNL 180 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~ 180 (329)
..+|+.|||.+||+|..+..+++ ++.+++++|+++..++.+++|++..++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~-~gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKK-LGRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCEEEECCCCCCHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 36899999999999988877765 466999999999999999999987664
No 303
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.24 E-value=0.0007 Score=62.62 Aligned_cols=78 Identities=23% Similarity=0.208 Sum_probs=61.5
Q ss_pred CeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccccc
Q psy15212 134 MYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRFY 212 (329)
Q Consensus 134 ~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
.+|||++||.||.++-+-+ .| -.|.|+|+++..++..+.|. ...++.+|.+++...
T Consensus 1 mkvidLFsG~GG~~~G~~~-aG~~~v~a~e~d~~a~~ty~~N~-----~~~~~~~DI~~i~~~----------------- 57 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQK-AGFRIICANEYDKSIWKTYESNH-----SAKLIKGDISKISSD----------------- 57 (331)
T ss_dssp CEEEEESCTTCHHHHHHHH-TTCEEEEEEECCTTTHHHHHHHC-----CSEEEESCGGGCCGG-----------------
T ss_pred CeEEEeCcCccHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHHC-----CCCcccCChhhCCHh-----------------
Confidence 3799999999999988765 45 47789999999999988885 246788998876510
Q ss_pred CCCCCCEEEEccCCcccccccc
Q psy15212 213 KNKYFDRILADLPCTGSGVVRR 234 (329)
Q Consensus 213 ~~~~fD~Vl~D~PCsg~G~~~~ 234 (329)
.-..+|+|+.-|||.+..+..+
T Consensus 58 ~~~~~D~l~ggpPCQ~fS~ag~ 79 (331)
T 3ubt_Y 58 EFPKCDGIIGGPPSQSWSEGGS 79 (331)
T ss_dssp GSCCCSEEECCCCGGGTEETTE
T ss_pred hCCcccEEEecCCCCCcCCCCC
Confidence 1146999999999988777654
No 304
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.15 E-value=0.00063 Score=63.33 Aligned_cols=82 Identities=17% Similarity=0.265 Sum_probs=60.8
Q ss_pred CCeEEeecCCCchHHHHHHHhC-C-CEE-EEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA-D-IKL-ISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~-~-~~v-~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
.-+|+|+|||.||.+..+.+.. + ..| .|+|+++..++..+.|.... ++.+|..++....
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-----~~~~DI~~~~~~~------------- 71 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-----VQVKNLDSISIKQ------------- 71 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-----CBCCCTTTCCHHH-------------
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-----cccCChhhcCHHH-------------
Confidence 3489999999999999887653 1 356 79999999999999997432 5567887765111
Q ss_pred cccCCCCCCEEEEccCCccc--ccccc
Q psy15212 210 RFYKNKYFDRILADLPCTGS--GVVRR 234 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~--G~~~~ 234 (329)
+....+|+|+..|||.+. ....+
T Consensus 72 --i~~~~~Dil~ggpPCQ~fs~S~ag~ 96 (327)
T 3qv2_A 72 --IESLNCNTWFMSPPCQPYNNSIMSK 96 (327)
T ss_dssp --HHHTCCCEEEECCCCTTCSHHHHTT
T ss_pred --hccCCCCEEEecCCccCcccccCCC
Confidence 112369999999999987 54443
No 305
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.06 E-value=0.00095 Score=62.28 Aligned_cols=82 Identities=22% Similarity=0.261 Sum_probs=61.3
Q ss_pred CeEEeecCCCchHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccccc
Q psy15212 134 MYVLDACSAPGGKTCHLLEIAD--IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRF 211 (329)
Q Consensus 134 ~~VLDlcag~G~kt~~la~~~~--~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
-+++|+|||.||.+..+.+..- ..|.|+|+++..++..+.|... ..++..|..++....
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~----~~~~~~DI~~~~~~~--------------- 64 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE----TNLLNRNIQQLTPQV--------------- 64 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT----SCEECCCGGGCCHHH---------------
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC----CceeccccccCCHHH---------------
Confidence 3799999999999998876532 3688999999999998888643 346678887764111
Q ss_pred cCCCCCCEEEEccCCcccccccc
Q psy15212 212 YKNKYFDRILADLPCTGSGVVRR 234 (329)
Q Consensus 212 ~~~~~fD~Vl~D~PCsg~G~~~~ 234 (329)
.....+|+++..|||.+.....+
T Consensus 65 ~~~~~~D~l~ggpPCQ~fS~ag~ 87 (333)
T 4h0n_A 65 IKKWNVDTILMSPPCQPFTRNGK 87 (333)
T ss_dssp HHHTTCCEEEECCCCCCSEETTE
T ss_pred hccCCCCEEEecCCCcchhhhhh
Confidence 11236999999999987766544
No 306
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.99 E-value=0.0019 Score=59.32 Aligned_cols=126 Identities=20% Similarity=0.213 Sum_probs=78.6
Q ss_pred CeEEeecCCCchHHHHHHH----hCC-C--EEEEEeCCh--------hHHHHHHH-HHHHc----C--CceEEEecCccc
Q psy15212 134 MYVLDACSAPGGKTCHLLE----IAD-I--KLISVDNNL--------SRLNMISE-NLKRL----N--LKATLILSDISK 191 (329)
Q Consensus 134 ~~VLDlcag~G~kt~~la~----~~~-~--~v~avD~~~--------~rl~~l~~-n~~~~----g--~~v~~~~~D~~~ 191 (329)
-+|||+|-|+|-..+...+ ..+ . +.+++|..+ .-+..+.+ .+.+. + +..++..+|+..
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 4799999999987654432 122 3 567787532 11222222 22332 1 124677888876
Q ss_pred cchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEE
Q psy15212 192 INLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKL 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~l 271 (329)
.- ..+....||.|++|+= | -.++|++ |. .++++..+++++|||++
T Consensus 178 ~l----------------~~l~~~~~Da~flDgF-s----P~kNPeL-Ws-------------~e~f~~l~~~~~pgg~l 222 (308)
T 3vyw_A 178 RI----------------KEVENFKADAVFHDAF-S----PYKNPEL-WT-------------LDFLSLIKERIDEKGYW 222 (308)
T ss_dssp HG----------------GGCCSCCEEEEEECCS-C----TTTSGGG-GS-------------HHHHHHHHTTEEEEEEE
T ss_pred HH----------------hhhcccceeEEEeCCC-C----cccCccc-CC-------------HHHHHHHHHHhCCCcEE
Confidence 42 1123457999999972 1 1467774 32 46899999999999998
Q ss_pred EEEcCCCCccccHHHHHHHHhhCCCcEEecC
Q psy15212 272 LFVTCSLWFEESEEQAIIFSKNHKDSIRLNS 302 (329)
Q Consensus 272 vysTCS~~~~Ene~vv~~~l~~~~~~~~~~~ 302 (329)
+--||+ ..|..-|+.. +|.+...
T Consensus 223 aTYtaa-------g~VRR~L~~a-GF~V~k~ 245 (308)
T 3vyw_A 223 VSYSSS-------LSVRKSLLTL-GFKVGSS 245 (308)
T ss_dssp EESCCC-------HHHHHHHHHT-TCEEEEE
T ss_pred EEEeCc-------HHHHHHHHHC-CCEEEec
Confidence 855554 6788888876 6765543
No 307
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.99 E-value=0.0029 Score=58.87 Aligned_cols=91 Identities=18% Similarity=0.151 Sum_probs=64.8
Q ss_pred CCCCCCeEEeecCCC-chHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccc
Q psy15212 129 DIRSGMYVLDACSAP-GGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 129 ~~~~g~~VLDlcag~-G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
.+++|++||-.|||+ |..+.++|+..+.+|+++|.++++++.++ ++|....+ .|...+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v~--~~~~~~--------------- 231 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL----SMGVKHFY--TDPKQC--------------- 231 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH----HTTCSEEE--SSGGGC---------------
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----hcCCCeec--CCHHHH---------------
Confidence 678999999999866 66777788878889999999999988764 46765322 332221
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
. +.+|+|+- |+|.. ..+..+++.|++||+++..
T Consensus 232 -----~-~~~D~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 232 -----K-EELDFIIS---TIPTH-------------------------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp -----C-SCEEEEEE---CCCSC-------------------------CCHHHHHTTEEEEEEEEEC
T ss_pred -----h-cCCCEEEE---CCCcH-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 1 27999873 33321 1266788899999998864
No 308
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.85 E-value=0.0016 Score=61.19 Aligned_cols=80 Identities=13% Similarity=0.127 Sum_probs=59.7
Q ss_pred ceEEEechh-HHHHhhhcCCC------CCCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceE
Q psy15212 112 GFCSIQDAA-AQLAAPLLDIR------SGMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKAT 183 (329)
Q Consensus 112 G~~~~Qd~~-s~l~~~~l~~~------~g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~ 183 (329)
|+=++.|+. ..-++..+++. +++.|||+|.|+|..|..|++... .+|+|+|+++..+..+++.+ . .-+++
T Consensus 31 GQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-~~~l~ 108 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-GSPLQ 108 (353)
T ss_dssp GCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-TSSCE
T ss_pred CcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-CCCEE
Confidence 544444544 23334444555 368999999999999999998643 69999999999999998877 2 22489
Q ss_pred EEecCccccc
Q psy15212 184 LILSDISKIN 193 (329)
Q Consensus 184 ~~~~D~~~~~ 193 (329)
++.+|+.+++
T Consensus 109 ii~~D~l~~~ 118 (353)
T 1i4w_A 109 ILKRDPYDWS 118 (353)
T ss_dssp EECSCTTCHH
T ss_pred EEECCccchh
Confidence 9999997654
No 309
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.85 E-value=0.0013 Score=60.94 Aligned_cols=50 Identities=22% Similarity=0.347 Sum_probs=41.7
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
..+++|++||-.|||+ |..++++|+..+.+|+++|.++++++.++ ++|..
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~ 212 (340)
T 3s2e_A 162 TDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR----RLGAE 212 (340)
T ss_dssp TTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----HcCCC
Confidence 3578999999999876 78888888888899999999999988654 46765
No 310
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.80 E-value=0.0077 Score=56.15 Aligned_cols=50 Identities=18% Similarity=0.206 Sum_probs=40.6
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|||+ |..+.++|+..+. +|+++|.++++++.++ ++|..
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~ 218 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK----EIGAD 218 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCCC
Confidence 4688999999999875 6677788887886 9999999999988764 46765
No 311
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.74 E-value=0.01 Score=55.13 Aligned_cols=50 Identities=14% Similarity=0.140 Sum_probs=40.1
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|||+ |..+.++|+..+.+|+++|.++++++.++ .+|..
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~ 214 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGAD 214 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH----HhCCC
Confidence 4688999999999765 66677777777778999999999988764 46765
No 312
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.68 E-value=0.0022 Score=60.32 Aligned_cols=51 Identities=20% Similarity=0.203 Sum_probs=40.8
Q ss_pred hcCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 127 LLDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
...+++|++||-.|||+ |..++++|+..+. +|+++|.++++++.+++ +|..
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~ 229 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGAT 229 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC
Confidence 34688999999999866 6677778887885 99999999999886654 6765
No 313
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.63 E-value=0.0016 Score=59.48 Aligned_cols=77 Identities=14% Similarity=0.248 Sum_probs=46.7
Q ss_pred eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHH
Q psy15212 182 ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL 261 (329)
Q Consensus 182 v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a 261 (329)
++++++|+.+.. ..+.+++||+|++|||+.........+... ....+.........++++.+
T Consensus 22 ~~i~~gD~~~~l----------------~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~--~~~~~~~~~l~~l~~~~~~~ 83 (297)
T 2zig_A 22 HRLHVGDAREVL----------------ASFPEASVHLVVTSPPYWTLKRYEDTPGQL--GHIEDYEAFLDELDRVWREV 83 (297)
T ss_dssp EEEEESCHHHHH----------------TTSCTTCEEEEEECCCCCCCC-------CC--HHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECcHHHHH----------------hhCCCCceeEEEECCCCCCccccCCChhhh--cccccHHHHHHHHHHHHHHH
Confidence 678999988742 123457899999999996432221111100 00111222333456788999
Q ss_pred HhcCCCCCEEEEEcC
Q psy15212 262 WKMLKPGGKLLFVTC 276 (329)
Q Consensus 262 ~~~LkpgG~lvysTC 276 (329)
.++|||||.+++...
T Consensus 84 ~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 84 FRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHEEEEEEEEEEEC
T ss_pred HHHcCCCcEEEEEEC
Confidence 999999999987644
No 314
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.58 E-value=0.014 Score=55.25 Aligned_cols=127 Identities=16% Similarity=0.085 Sum_probs=71.3
Q ss_pred CCeEEeecCCCchHHHHHHHh-------------C----C-CEEEEEeCChhHHHHHHHH-------H-HHcCC--ceEE
Q psy15212 133 GMYVLDACSAPGGKTCHLLEI-------------A----D-IKLISVDNNLSRLNMISEN-------L-KRLNL--KATL 184 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~-------------~----~-~~v~avD~~~~rl~~l~~n-------~-~~~g~--~v~~ 184 (329)
.-+|+|+|||+|..|+.+... . + ..|+.+|+-..=...+=.. + +..|- ...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999999988765 1 2 4788888863322222111 1 12232 2345
Q ss_pred EecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCc-------ccC--------ChhHH--
Q psy15212 185 ILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIP-------WLR--------RKNDI-- 247 (329)
Q Consensus 185 ~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~-------~~~--------~~~~~-- 247 (329)
+.+....+- . ..++.++||.|....- .-=+.+.|+.. |.+ ++..+
T Consensus 133 ~~gvpgSFy-------------~--rlfp~~S~d~v~Ss~a---LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ 194 (384)
T 2efj_A 133 IGAMPGSFY-------------S--RLFPEESMHFLHSCYC---LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQK 194 (384)
T ss_dssp EEECCSCTT-------------S--CCSCTTCEEEEEEESC---TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHH
T ss_pred EEecchhhh-------------h--ccCCCCceEEEEecce---eeecCCCchhhhccccccccCCceEecCCCCHHHHH
Confidence 555554432 0 1246789999986432 11122233210 111 12222
Q ss_pred ---HHHHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 248 ---KKLSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 248 ---~~l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
.+..+--..+|+.-++-|+|||+||.++..
T Consensus 195 ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 195 AYLDQFTKDFTTFLRIHSEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCeEEEEEec
Confidence 233334456788889999999999998754
No 315
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.57 E-value=0.0028 Score=61.94 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=59.0
Q ss_pred CCeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhh-hhhccccccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLY-IDINKKTNNRFR 210 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~-~~~~~~~~~~~~ 210 (329)
.-+++|+|||.||.++.+-+ .| ..|+|+|+++..++..+.|.... -...++.+|+.++...... +..... -..+.
T Consensus 88 ~~~viDLFaG~GGlslG~~~-aG~~~v~avE~d~~A~~ty~~N~~~~-p~~~~~~~DI~~i~~~~~~~~~~~~~-~~~i~ 164 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFES-IGGQCVFTSEWNKHAVRTYKANHYCD-PATHHFNEDIRDITLSHQEGVSDEAA-AEHIR 164 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHT-TTEEEEEEECCCHHHHHHHHHHSCCC-TTTCEEESCTHHHHCTTCTTSCHHHH-HHHHH
T ss_pred cceEEEecCCccHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHhcccC-CCcceeccchhhhhhccccccchhhH-Hhhhh
Confidence 45899999999999988875 34 46899999999999888886211 1245677888765410000 000000 00000
Q ss_pred ccCCCCCCEEEEccCCcccccccc
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVRR 234 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~~ 234 (329)
.....+|+|+.-|||.+..+.++
T Consensus 165 -~~~~~~Dvl~gGpPCQ~FS~AG~ 187 (482)
T 3me5_A 165 -QHIPEHDVLLAGFPCQPFSLAGV 187 (482)
T ss_dssp -HHSCCCSEEEEECCCCCC-----
T ss_pred -hcCCCCCEEEecCCCcchhhhCc
Confidence 01146899999999987766643
No 316
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.56 E-value=0.01 Score=56.17 Aligned_cols=26 Identities=19% Similarity=0.241 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 252 KYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 252 ~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
+-...+|+.-++-|+|||+||.++..
T Consensus 202 ~D~~~fL~~ra~eL~pGG~mvl~~~g 227 (374)
T 3b5i_A 202 ADLAEFLRARAAEVKRGGAMFLVCLG 227 (374)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEEec
Confidence 33456899999999999999998753
No 317
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.55 E-value=0.0019 Score=61.37 Aligned_cols=48 Identities=23% Similarity=0.288 Sum_probs=40.1
Q ss_pred CCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCC
Q psy15212 129 DIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNL 180 (329)
Q Consensus 129 ~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~ 180 (329)
++++|++||-.|||+ |..++++|+..+. +|+++|.++++++.++ ++|.
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa 231 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DAGF 231 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TTTC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCC
Confidence 578999999999877 7778888887775 9999999999987654 4676
No 318
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.50 E-value=0.0032 Score=59.12 Aligned_cols=51 Identities=18% Similarity=0.185 Sum_probs=40.5
Q ss_pred hcCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 127 LLDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
..++++|++||-.|||+ |..+.++|+..+. +|+++|.++++++.++ ++|..
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~ 237 (371)
T 1f8f_A 185 ALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAK----QLGAT 237 (371)
T ss_dssp TTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----HHTCS
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH----HcCCC
Confidence 34688999999999876 6677788877775 8999999999988765 35654
No 319
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.49 E-value=0.0096 Score=55.93 Aligned_cols=49 Identities=10% Similarity=0.051 Sum_probs=40.3
Q ss_pred CCCCCCeEEeecCCC-chHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIRSGMYVLDACSAP-GGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g~~VLDlcag~-G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.+++|++||-.|+|+ |..++++|+..+.+|+++|.++++++.+++ +|..
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa~ 240 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGAD 240 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCc
Confidence 678999999999875 667778888788899999999999987654 5654
No 320
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.48 E-value=0.0037 Score=59.28 Aligned_cols=49 Identities=20% Similarity=0.192 Sum_probs=40.3
Q ss_pred CCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
++++|++||-.|||+ |..++++|+.+++ +|+++|.++++++.++ ++|..
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~----~lGa~ 232 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFE 232 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH----HcCCc
Confidence 578999999999866 6777888888885 8999999999988764 46764
No 321
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.43 E-value=0.0083 Score=57.38 Aligned_cols=59 Identities=14% Similarity=0.183 Sum_probs=48.9
Q ss_pred CCCCCCeEEeecCCCchHHHHHH-HhCC--CEEEEEeCChhHHHHHHHHHHH---cCC-c-eEEEec
Q psy15212 129 DIRSGMYVLDACSAPGGKTCHLL-EIAD--IKLISVDNNLSRLNMISENLKR---LNL-K-ATLILS 187 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G~kt~~la-~~~~--~~v~avD~~~~rl~~l~~n~~~---~g~-~-v~~~~~ 187 (329)
.+.+|+.|+|+||+.|..+..++ ...+ ++|+|+|.++...+.+++|++. .+. . ++++..
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~ 289 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGC 289 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECS
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEe
Confidence 45789999999999999999988 4554 6999999999999999999998 234 3 555543
No 322
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.32 E-value=0.0091 Score=56.14 Aligned_cols=125 Identities=13% Similarity=0.086 Sum_probs=73.9
Q ss_pred CeEEeecCCCchHHHHHHHh----------------CC-CEEEEEeCChhHHHHHHHHHHHcCC--ceEEEecCccccch
Q psy15212 134 MYVLDACSAPGGKTCHLLEI----------------AD-IKLISVDNNLSRLNMISENLKRLNL--KATLILSDISKINL 194 (329)
Q Consensus 134 ~~VLDlcag~G~kt~~la~~----------------~~-~~v~avD~~~~rl~~l~~n~~~~g~--~v~~~~~D~~~~~~ 194 (329)
-+|+|+||++|..|+.+... .+ ..|+.+|+...-...+-+++....- ...++.+....+-
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy- 131 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY- 131 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS-
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh-
Confidence 57999999999988876654 11 5788888888877777766643210 1234444433321
Q ss_pred hhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCC--------cccC-Ch-----hHHHHHHHHHHHHHHH
Q psy15212 195 KKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDI--------PWLR-RK-----NDIKKLSKYSCKILNN 260 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~--------~~~~-~~-----~~~~~l~~~q~~lL~~ 260 (329)
. ..++.+++|.|..... .-=+.+.|+. .... ++ .-..+..+--..+|+.
T Consensus 132 ------------~--rlfp~~S~d~v~Ss~a---LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~ 194 (359)
T 1m6e_X 132 ------------G--RLFPRNTLHFIHSSYS---LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRC 194 (359)
T ss_dssp ------------S--CCSCTTCBSCEEEESC---TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHH
T ss_pred ------------h--ccCCCCceEEEEehhh---hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1246788999976322 1111112211 0000 00 1234555555678999
Q ss_pred HHhcCCCCCEEEEEcC
Q psy15212 261 LWKMLKPGGKLLFVTC 276 (329)
Q Consensus 261 a~~~LkpgG~lvysTC 276 (329)
-++-|+|||+||.++.
T Consensus 195 Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 195 RAQEVVPGGRMVLTIL 210 (359)
T ss_dssp HHHHBCTTCEEEEEEE
T ss_pred HHHHhcCCceEEEEEe
Confidence 9999999999999864
No 323
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.31 E-value=0.0096 Score=55.38 Aligned_cols=102 Identities=18% Similarity=0.189 Sum_probs=65.4
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKT 205 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~ 205 (329)
..+++|++||=.|||+ |..++++|+..+. +|+++|.++++++.+++ +|... ++..+-.++. ..+.
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~-vi~~~~~~~~-~~v~------- 228 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGATD-IINYKNGDIV-EQIL------- 228 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTCCE-EECGGGSCHH-HHHH-------
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCce-EEcCCCcCHH-HHHH-------
Confidence 4578999999998876 6677778887775 89999999999877654 56542 2221111111 0000
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
....+..+|+|+ | |+|.. ..+..+++.|++||+++..
T Consensus 229 ----~~t~g~g~D~v~-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 229 ----KATDGKGVDKVV-I--AGGDV-------------------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp ----HHTTTCCEEEEE-E--CSSCT-------------------------THHHHHHHHEEEEEEEEEC
T ss_pred ----HHcCCCCCCEEE-E--CCCCh-------------------------HHHHHHHHHHhcCCEEEEe
Confidence 111234799997 3 33321 2477788899999998854
No 324
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.22 E-value=0.019 Score=53.84 Aligned_cols=50 Identities=14% Similarity=0.088 Sum_probs=39.8
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|+|+ |..++++|+..+. +|+++|.++++++.++ ++|..
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa~ 239 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGAT 239 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HhCCc
Confidence 4578999999998765 6667777877786 8999999999998764 46764
No 325
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.21 E-value=0.029 Score=52.28 Aligned_cols=47 Identities=28% Similarity=0.222 Sum_probs=38.8
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCCE-EEEEeCChhHHHHHHHH
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADIK-LISVDNNLSRLNMISEN 174 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~~-v~avD~~~~rl~~l~~n 174 (329)
..+++|++||=.|||+ |..++++|+..+.+ |+++|.++++++.+++.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 3688999999998865 66777788877765 99999999999988764
No 326
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.20 E-value=0.00095 Score=61.93 Aligned_cols=63 Identities=13% Similarity=0.005 Sum_probs=50.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
..+|+.|||.+||+|..+..+. .++.+.+++|+++..++.+++++++.+.....+..|+.++.
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~-~~gr~~ig~e~~~~~~~~~~~r~~~~~~~~~~~~~~~~~i~ 312 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAE-RESRKWISFEMKPEYVAASAFRFLDNNISEEKITDIYNRIL 312 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHH-HTTCEEEEEESCHHHHHHHHGGGSCSCSCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHH-HcCCCEEEEeCCHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 4689999999999998666555 45679999999999999999999888766555556665543
No 327
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.19 E-value=0.022 Score=53.32 Aligned_cols=50 Identities=14% Similarity=0.078 Sum_probs=39.7
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|||+ |..++++|+.++. +|+++|.++++++.++ ++|..
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa~ 238 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK----EVGAT 238 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HhCCc
Confidence 4578999999999765 6667777877776 8999999999988764 46764
No 328
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.19 E-value=0.021 Score=53.33 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=40.2
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|+|+ |..++++|+..+.+|+++|.++++++.++ ++|..
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~ 235 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAF----ALGAD 235 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH----HcCCC
Confidence 3578999999999776 66777778777889999999999988754 46765
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.16 E-value=0.02 Score=53.59 Aligned_cols=50 Identities=12% Similarity=0.046 Sum_probs=39.2
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|||+ |..++++|+..+. +|+++|.++++++.++ ++|..
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~ 238 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----ELGAT 238 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH----HcCCc
Confidence 4578999999999765 5566677777775 8999999999988764 46765
No 330
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.07 E-value=0.0067 Score=56.14 Aligned_cols=72 Identities=10% Similarity=0.141 Sum_probs=48.6
Q ss_pred eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHH
Q psy15212 182 ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL 261 (329)
Q Consensus 182 v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a 261 (329)
+.++++|+...- ..+.+++||+|++|||+..... ..|. ......+.....+.|..+
T Consensus 15 ~~ii~gD~~~~l----------------~~l~~~svDlI~tDPPY~~~~~------~~y~--~~~~~~~~~~l~~~l~~~ 70 (323)
T 1boo_A 15 GSMYIGDSLELL----------------ESFPEESISLVMTSPPFALQRK------KEYG--NLEQHEYVDWFLSFAKVV 70 (323)
T ss_dssp EEEEESCHHHHG----------------GGSCSSCEEEEEECCCCSSSCS------CSSC--SCHHHHHHHHHHHHHHHH
T ss_pred ceEEeCcHHHHH----------------hhCCCCCeeEEEECCCCCCCcc------cccC--CcCHHHHHHHHHHHHHHH
Confidence 578889987642 1234678999999999963311 0121 123345555667889999
Q ss_pred HhcCCCCCEEEEEcCC
Q psy15212 262 WKMLKPGGKLLFVTCS 277 (329)
Q Consensus 262 ~~~LkpgG~lvysTCS 277 (329)
.++|+|||.+++....
T Consensus 71 ~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 71 NKKLKPDGSFVVDFGG 86 (323)
T ss_dssp HHHEEEEEEEEEEECC
T ss_pred HHHCcCCcEEEEEECC
Confidence 9999999999887543
No 331
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=96.03 E-value=0.033 Score=53.17 Aligned_cols=44 Identities=16% Similarity=0.026 Sum_probs=36.7
Q ss_pred CeEEeecCCCchHHHHHHHhCC--CE----EEEEeCChhHHHHHHHHHHH
Q psy15212 134 MYVLDACSAPGGKTCHLLEIAD--IK----LISVDNNLSRLNMISENLKR 177 (329)
Q Consensus 134 ~~VLDlcag~G~kt~~la~~~~--~~----v~avD~~~~rl~~l~~n~~~ 177 (329)
-+|+|+|||.||.+..+-+... .. |.++|+++..++..+.|...
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 4899999999999988876532 24 89999999999999988754
No 332
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.03 E-value=0.024 Score=53.05 Aligned_cols=50 Identities=14% Similarity=0.109 Sum_probs=38.8
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|+|+ |..++++|+..+. +|+++|.++++++.++ ++|..
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa~ 237 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK----EFGAT 237 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCCc
Confidence 4578999999998755 5566677776775 8999999999988765 45764
No 333
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.03 E-value=0.01 Score=55.80 Aligned_cols=50 Identities=12% Similarity=0.163 Sum_probs=39.3
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
..+++|++||=.|||+ |..++++|+..+. +|+++|.++++++.++ ++|..
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~----~lGa~ 240 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK----KFGVN 240 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH----TTTCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCCc
Confidence 4678999999998864 6666777777775 8999999999988654 56765
No 334
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.02 E-value=0.028 Score=52.68 Aligned_cols=50 Identities=16% Similarity=0.089 Sum_probs=39.5
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|||+ |..++++|+.++. +|+++|.++++++.++ ++|..
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~ 242 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK----ALGAT 242 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HhCCc
Confidence 4578999999999764 5666777777786 8999999999988764 46764
No 335
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.88 E-value=0.0087 Score=55.49 Aligned_cols=48 Identities=13% Similarity=0.156 Sum_probs=39.0
Q ss_pred CCCCCCeEEeecCCC-chHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIRSGMYVLDACSAP-GGKTCHLLEIA--DIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g~~VLDlcag~-G~kt~~la~~~--~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
++ +|++||-.|+|+ |..+.++|+.. +.+|+++|.++++++.+++ +|..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~ 218 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGAD 218 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCS
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCC
Confidence 67 899999999865 66777888877 7899999999999887654 5654
No 336
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.84 E-value=0.012 Score=54.91 Aligned_cols=50 Identities=6% Similarity=-0.057 Sum_probs=39.0
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|+|+ |..+.++|+..+.+|+++|.++++++.+++ +|..
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lGa~ 225 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGAD 225 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCC
Confidence 3678999999999854 556666777667799999999999887654 5654
No 337
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.83 E-value=0.0043 Score=55.51 Aligned_cols=72 Identities=13% Similarity=0.185 Sum_probs=45.6
Q ss_pred eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHH
Q psy15212 182 ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL 261 (329)
Q Consensus 182 v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a 261 (329)
.+++++|+...- ....+++||+|++|||+..... .|. ..............+|+.+
T Consensus 5 ~~l~~gD~~~~l----------------~~l~~~~vdlI~~DPPY~~~~~-------~~d-~~~~~~~y~~~~~~~l~~~ 60 (260)
T 1g60_A 5 NKIHQMNCFDFL----------------DQVENKSVQLAVIDPPYNLSKA-------DWD-SFDSHNEFLAFTYRWIDKV 60 (260)
T ss_dssp SSEEECCHHHHH----------------HHSCTTCEEEEEECCCCSSCSS-------GGG-CCSSHHHHHHHHHHHHHHH
T ss_pred CeEEechHHHHH----------------HhccccccCEEEECCCCCCCcc-------ccc-ccCCHHHHHHHHHHHHHHH
Confidence 457788876542 1134568999999999853210 010 0002334444556788888
Q ss_pred HhcCCCCCEEEEEcCC
Q psy15212 262 WKMLKPGGKLLFVTCS 277 (329)
Q Consensus 262 ~~~LkpgG~lvysTCS 277 (329)
.++|++||.++...|.
T Consensus 61 ~~~Lk~~g~i~v~~~d 76 (260)
T 1g60_A 61 LDKLDKDGSLYIFNTP 76 (260)
T ss_dssp HHHEEEEEEEEEEECH
T ss_pred HHHhcCCeEEEEEcCc
Confidence 9999999998877543
No 338
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.81 E-value=0.02 Score=52.87 Aligned_cols=51 Identities=20% Similarity=0.244 Sum_probs=41.4
Q ss_pred hcCCCCCCeEEeecCC--CchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 127 LLDIRSGMYVLDACSA--PGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag--~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
...+++|++||-.||| .|..+.++|+..+.+|+++|.++++++.+++ +|..
T Consensus 139 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga~ 191 (340)
T 3gms_A 139 TLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGAA 191 (340)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCS
T ss_pred hcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCCc
Confidence 3468899999999886 5777778887777899999999999887765 5654
No 339
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.76 E-value=0.027 Score=52.04 Aligned_cols=100 Identities=13% Similarity=0.177 Sum_probs=65.2
Q ss_pred CCCCCCeEEeecCCC-chHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccc
Q psy15212 129 DIRSGMYVLDACSAP-GGKTCHLLEIA-DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 129 ~~~~g~~VLDlcag~-G~kt~~la~~~-~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.+++|++||-.|||+ |..++++|+.. +.+|+++|.++++++.++ ++|.... +..+. +.. ..+.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~----~lGa~~~-i~~~~-~~~-~~v~-------- 232 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAR----EVGADAA-VKSGA-GAA-DAIR-------- 232 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH----HTTCSEE-EECST-THH-HHHH--------
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCCEE-EcCCC-cHH-HHHH--------
Confidence 578999999999866 66777788776 479999999999988764 4676522 22111 111 0000
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
.......+|+|+- |+|. ...+..+++.|++||+++..
T Consensus 233 ---~~t~g~g~d~v~d---~~G~-------------------------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 233 ---ELTGGQGATAVFD---FVGA-------------------------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp ---HHHGGGCEEEEEE---SSCC-------------------------HHHHHHHHHHEEEEEEEEEC
T ss_pred ---HHhCCCCCeEEEE---CCCC-------------------------HHHHHHHHHHHhcCCEEEEE
Confidence 0012347999873 3322 12577888999999998864
No 340
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.75 E-value=0.011 Score=54.71 Aligned_cols=49 Identities=16% Similarity=0.059 Sum_probs=39.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCCh---hHHHHHHHHHHHcC
Q psy15212 130 IRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNL---SRLNMISENLKRLN 179 (329)
Q Consensus 130 ~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~---~rl~~l~~n~~~~g 179 (329)
..+|+.|||.+||+|..+..+.++ +.+.+++|+++ ..++.+++++++.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~-~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE-GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH-TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc-CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 468999999999999877766654 56999999999 99999999988765
No 341
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.75 E-value=0.027 Score=52.97 Aligned_cols=50 Identities=14% Similarity=0.150 Sum_probs=39.2
Q ss_pred cC-CCCCCeEEeecCCC-chHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LD-IRSGMYVLDACSAP-GGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~-~~~g~~VLDlcag~-G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
++ +++|++||-.|+|+ |..++++|+..+ .+|+++|.++++++.++ ++|..
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~----~lGa~ 242 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----EIGAD 242 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----HTTCS
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH----HcCCc
Confidence 36 78999999999654 556677777778 59999999999988765 46764
No 342
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.70 E-value=0.015 Score=53.01 Aligned_cols=50 Identities=10% Similarity=0.005 Sum_probs=39.1
Q ss_pred hcCCCCCCeEEeecCCC-chHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 127 LLDIRSGMYVLDACSAP-GGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~-G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
...+++|++||=.|||+ |..+.++|+..+.+|++++ ++++++.+++ +|..
T Consensus 137 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~----lGa~ 187 (315)
T 3goh_A 137 KIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK----RGVR 187 (315)
T ss_dssp TSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH----HTEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH----cCCC
Confidence 34578999999999854 6667777777778999999 9999887654 6754
No 343
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.69 E-value=0.021 Score=48.21 Aligned_cols=45 Identities=13% Similarity=0.194 Sum_probs=32.3
Q ss_pred cCCCCCCeEEeecCC--CchHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy15212 128 LDIRSGMYVLDACSA--PGGKTCHLLEIADIKLISVDNNLSRLNMIS 172 (329)
Q Consensus 128 l~~~~g~~VLDlcag--~G~kt~~la~~~~~~v~avD~~~~rl~~l~ 172 (329)
.++++|++||..|++ -|..+.+++...+.+|+++|.++++++.++
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS 80 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 467899999999853 344444555545679999999998876654
No 344
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.62 E-value=0.03 Score=51.69 Aligned_cols=49 Identities=18% Similarity=0.218 Sum_probs=37.4
Q ss_pred CCCCCCeEEeecCCCc-hHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIRSGMYVLDACSAPG-GKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g~~VLDlcag~G-~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.+++|++||=.|||++ +.+.+++...+ .+|+++|.++++++.+ +++|..
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~----~~~Ga~ 210 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLA----KKIGAD 210 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHH----HHTTCS
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhh----hhcCCe
Confidence 5889999999999875 45555665554 7999999999987654 456665
No 345
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.61 E-value=0.025 Score=57.55 Aligned_cols=124 Identities=16% Similarity=0.184 Sum_probs=77.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhC----------C---CEEEEEeCChhHHHHHHH--------------HHHHc-----C
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA----------D---IKLISVDNNLSRLNMISE--------------NLKRL-----N 179 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~----------~---~~v~avD~~~~rl~~l~~--------------n~~~~-----g 179 (329)
+.-+|+|+|-|+|...+.+.+.. . .+++++|..+-..+.+++ .++.+ |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34589999999999888876642 1 479999996644444443 22222 1
Q ss_pred ----------CceEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHH
Q psy15212 180 ----------LKATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKK 249 (329)
Q Consensus 180 ----------~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~ 249 (329)
+.+++..+|+...- +.+ .......||.+++|+... .++|++ |.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l-~~~------------~~~~~~~~da~flD~f~p-----~~np~~-w~-------- 190 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLL-PTL------------DDSLNNQVDAWFLDGFAP-----AKNPDM-WN-------- 190 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHG-GGC------------CGGGTTCEEEEEECSSCC-------CCTT-CS--------
T ss_pred ceEEEecCCcEEEEEEccCHHHHH-hhc------------ccccCCceeEEEECCCCC-----CCChhh-hh--------
Confidence 12456777776542 110 000136799999998533 367774 32
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhC
Q psy15212 250 LSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 294 (329)
Q Consensus 250 l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~ 294 (329)
.+++....+++++||++..-+|. ..|+..|...
T Consensus 191 -----~~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~l~~a 223 (689)
T 3pvc_A 191 -----EQLFNAMARMTRPGGTFSTFTAA-------GFVRRGLQQA 223 (689)
T ss_dssp -----HHHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHT
T ss_pred -----HHHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhC
Confidence 35777888899999998766665 3455556554
No 346
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=95.60 E-value=0.048 Score=49.19 Aligned_cols=95 Identities=16% Similarity=0.117 Sum_probs=54.6
Q ss_pred CCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhhC
Q psy15212 215 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 294 (329)
Q Consensus 215 ~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~~ 294 (329)
+++|+|++|..-..+|. +| ++=..+...++. +++.|.+.|+|||.+|.-.--......|.++..+.+.+
T Consensus 205 ~k~DvV~SDMApn~sGh-------~y---qQC~DHarii~L-al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F 273 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYH-------HY---QQCEDHAIKLSM-LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQF 273 (320)
T ss_dssp CCEEEEEEECCCCCCSC-------HH---HHHHHHHHHHHH-THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTE
T ss_pred CcCCEEEEcCCCCCCCc-------cc---cccchHHHHHHH-HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhc
Confidence 67999999976443333 00 100222223333 89999999999999995433333223455555554443
Q ss_pred CCcEEecCCCcccCCCCCCCCCCeEEEEEEEec
Q psy15212 295 KDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 327 (329)
Q Consensus 295 ~~~~~~~~~~~~~p~~~~~~~~~gff~a~l~k~ 327 (329)
..+..+. |...+. .++=||+|.=.|.
T Consensus 274 ~~Vr~vK------P~ASR~-StEvf~La~gf~g 299 (320)
T 2hwk_A 274 KFSRVCK------PKSSLE-ETEVLFVFIGYDR 299 (320)
T ss_dssp EEEEEEC------CTTCCS-TTCEEEEEEEECC
T ss_pred ceeeeeC------CCCccc-cceEEEEEEeecC
Confidence 3333332 433223 7889999976554
No 347
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.55 E-value=0.044 Score=50.51 Aligned_cols=51 Identities=8% Similarity=-0.052 Sum_probs=38.9
Q ss_pred hcCCCCCCeEEeecCCCc-hHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 127 LLDIRSGMYVLDACSAPG-GKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~G-~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
...+++|++||=.|||+. ..+.++|+.++ ..++++|.++++++.++ ++|..
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~----~lGa~ 207 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAK----SFGAM 207 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCS
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHH----HcCCe
Confidence 345789999999988763 45666777777 57899999999987654 57765
No 348
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.48 E-value=0.046 Score=51.04 Aligned_cols=96 Identities=10% Similarity=0.155 Sum_probs=61.6
Q ss_pred CCCeEEeec-CC-CchHHHHHHHh-CCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 132 SGMYVLDAC-SA-PGGKTCHLLEI-ADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 132 ~g~~VLDlc-ag-~G~kt~~la~~-~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
+|++||=.| +| .|..+.++|+. .+.+|+++|.++++++.++ ++|... ++... ..+. ..+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~----~lGad~-vi~~~-~~~~-~~v----------- 232 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK----SLGAHH-VIDHS-KPLA-AEV----------- 232 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH----HTTCSE-EECTT-SCHH-HHH-----------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH----HcCCCE-EEeCC-CCHH-HHH-----------
Confidence 789999887 33 36777788876 4589999999999988765 467652 22111 1111 000
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
.....+.+|+|+- |+|. ...+..+++.|++||+++..
T Consensus 233 -~~~~~~g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 233 -AALGLGAPAFVFS---TTHT-------------------------DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp -HTTCSCCEEEEEE---CSCH-------------------------HHHHHHHHHHSCTTCEEEEC
T ss_pred -HHhcCCCceEEEE---CCCc-------------------------hhhHHHHHHHhcCCCEEEEE
Confidence 0113357998873 3432 13577888999999999864
No 349
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.47 E-value=0.017 Score=53.41 Aligned_cols=49 Identities=14% Similarity=0.217 Sum_probs=38.9
Q ss_pred CCCCCCeEEeecCCC-chHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIRSGMYVLDACSAP-GGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g~~VLDlcag~-G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.+++|++||-.|+|+ |..+.++|+..+.+|+++|.++.+++.++ ++|..
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~ 210 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----ELGAD 210 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HCCCC
Confidence 678999999999853 55666777777789999999999988764 46664
No 350
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.43 E-value=0.053 Score=49.73 Aligned_cols=44 Identities=14% Similarity=0.286 Sum_probs=34.1
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMI 171 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l 171 (329)
.++++|++||-.|| |-|..+.+++...+.+|+++|.++++++.+
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 141 CGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp SCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred hCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 46789999999987 445555556666668999999999888766
No 351
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.42 E-value=0.017 Score=53.23 Aligned_cols=52 Identities=10% Similarity=0.237 Sum_probs=39.3
Q ss_pred hcCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 127 LLDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 127 ~l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
...+++|++||-.|| |-|..+.+++...+.+|+++|.++++++.+. +++|..
T Consensus 144 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~---~~~g~~ 197 (336)
T 4b7c_A 144 VGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV---EELGFD 197 (336)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HTTCCS
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHcCCC
Confidence 346889999999987 4466667777777789999999999887652 345654
No 352
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.35 E-value=0.042 Score=50.67 Aligned_cols=52 Identities=10% Similarity=0.234 Sum_probs=38.9
Q ss_pred hcCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 127 LLDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 127 ~l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
..++++|++||-.|| |-|..+.+++...+.+|+++|.++++++.+++ ++|..
T Consensus 150 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~g~~ 203 (345)
T 2j3h_A 150 VCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KFGFD 203 (345)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TSCCS
T ss_pred HhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCc
Confidence 346789999999987 45556666776677899999999998876652 34654
No 353
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=95.28 E-value=0.1 Score=47.17 Aligned_cols=128 Identities=14% Similarity=0.138 Sum_probs=76.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.|..||=.|++ |+.+.++++.+ +.+|+.++.+...++.+.+.+...+..+.++..|.++... +.--.+. ..
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~--v~~~~~~-~~-- 103 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDE--MVRLADE-AF-- 103 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH--HHHHHHH-HH--
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHH--HHHHHHH-HH--
Confidence 56788877766 66777777654 3699999999999999999888888788899999987541 1000000 00
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHH----HHHHHHHHHHHhcCCC---CCEEEEEc
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLS----KYSCKILNNLWKMLKP---GGKLLFVT 275 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~----~~q~~lL~~a~~~Lkp---gG~lvysT 275 (329)
. ..+..|.++.++--...+.+. ..+.++..... .-...+++.+...++. +|++|+.+
T Consensus 104 -~--~~g~id~lvnnAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~is 167 (301)
T 3tjr_A 104 -R--LLGGVDVVFSNAGIVVAGPLA-------QMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTA 167 (301)
T ss_dssp -H--HHSSCSEEEECCCCCCCBCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred -H--hCCCCCEEEECCCcCCCCCcc-------cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 0 014789999877544333221 12233332221 1223345555544432 67888764
No 354
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.18 E-value=0.043 Score=50.78 Aligned_cols=49 Identities=8% Similarity=0.231 Sum_probs=37.4
Q ss_pred CCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
++++|++||-.|+ |.|..+.+++...+.+|+++|.++++++.+++ +|..
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~~ 216 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGGE 216 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTCC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCCc
Confidence 5789999999998 34556666676667899999999988876543 5654
No 355
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.16 E-value=0.037 Score=51.22 Aligned_cols=46 Identities=9% Similarity=0.186 Sum_probs=34.9
Q ss_pred CCCeEEeec-CC-CchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 132 SGMYVLDAC-SA-PGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 132 ~g~~VLDlc-ag-~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
+|++||=.| +| .|..++++|+..+.+|+++|.++++++.+++ +|..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~ 197 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGAD 197 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTCS
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCc
Confidence 899999873 33 3556667777777899999999999887765 5654
No 356
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.13 E-value=0.075 Score=48.80 Aligned_cols=49 Identities=20% Similarity=0.295 Sum_probs=37.6
Q ss_pred CCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.+++|++||-.|| |-|..+.++++..+.+|+++|.++++++.++ ++|..
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~ga~ 195 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK----EYGAE 195 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCc
Confidence 5789999999984 3455666677777789999999999988664 35654
No 357
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.13 E-value=0.041 Score=50.92 Aligned_cols=45 Identities=11% Similarity=0.140 Sum_probs=36.3
Q ss_pred CCCCCCeEEeecCC--CchHHHHHHHhC-CCEEEEEeCChhHHHHHHH
Q psy15212 129 DIRSGMYVLDACSA--PGGKTCHLLEIA-DIKLISVDNNLSRLNMISE 173 (329)
Q Consensus 129 ~~~~g~~VLDlcag--~G~kt~~la~~~-~~~v~avD~~~~rl~~l~~ 173 (329)
.+++|++||-.|+| .|..+.+++... +.+|+++|.++++++.+++
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 57899999999987 455666777777 7899999999999887643
No 358
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=95.13 E-value=0.035 Score=58.76 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=59.4
Q ss_pred CeEEeecCCCchHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccccc
Q psy15212 134 MYVLDACSAPGGKTCHLLEIAD-IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFRFY 212 (329)
Q Consensus 134 ~~VLDlcag~G~kt~~la~~~~-~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
-+++|++||.||.++-+.+..- -.+.|+|+++..++..+.|.. ...++..|...+......-++.......+ .
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p----~~~~~~~DI~~l~~~~~~~di~~~~~~~l--p 614 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP----GSTVFTEDCNILLKLVMAGETTNSRGQRL--P 614 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT----TSEEECSCHHHHHHHHHHTCSBCTTCCBC--C
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC----CCccccccHHHHhhhccchhhhhhhhhhc--c
Confidence 4799999999999998876432 268899999999998888753 24566677544310000000000000111 1
Q ss_pred CCCCCCEEEEccCCccccccc
Q psy15212 213 KNKYFDRILADLPCTGSGVVR 233 (329)
Q Consensus 213 ~~~~fD~Vl~D~PCsg~G~~~ 233 (329)
..+.+|+|+.-|||.+....+
T Consensus 615 ~~~~vDll~GGpPCQ~FS~ag 635 (1002)
T 3swr_A 615 QKGDVEMLCGGPPCQGFSGMN 635 (1002)
T ss_dssp CTTTCSEEEECCCCTTCCSSS
T ss_pred cCCCeeEEEEcCCCcchhhhC
Confidence 235799999999998776554
No 359
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.09 E-value=0.075 Score=49.09 Aligned_cols=50 Identities=18% Similarity=0.207 Sum_probs=39.6
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
..+++|++||-.|| |.|..+.++|+..+.+|++++.++++++.+++ +|..
T Consensus 155 ~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~ 206 (342)
T 4eye_A 155 GQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----VGAD 206 (342)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCS
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCc
Confidence 45789999999886 34667777787778899999999999877664 4654
No 360
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.05 E-value=0.065 Score=49.04 Aligned_cols=50 Identities=16% Similarity=0.236 Sum_probs=37.5
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|+ |-|..+.++|+..+.+|+++|.++++++.+++ +|..
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~ 187 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA----LGAW 187 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCS
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCC
Confidence 35789999998873 34556666676667899999999999887753 5654
No 361
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.99 E-value=0.081 Score=48.80 Aligned_cols=45 Identities=13% Similarity=0.195 Sum_probs=37.4
Q ss_pred CCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy15212 129 DIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISE 173 (329)
Q Consensus 129 ~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~ 173 (329)
++++|++||-.|+ |.|..+.+++...+.+|+++|.++++++.+++
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 5788999999998 55667777787777899999999999887753
No 362
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.98 E-value=0.036 Score=51.75 Aligned_cols=50 Identities=16% Similarity=0.168 Sum_probs=39.3
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|+ |.|..++++|...+.+|+++|.++++++.+++ +|..
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~ 210 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCD 210 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCc
Confidence 36789999999983 45667777787777899999999998877654 6664
No 363
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.90 E-value=0.15 Score=48.30 Aligned_cols=49 Identities=27% Similarity=0.304 Sum_probs=38.7
Q ss_pred CCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.+++|++||=.|||+ |..++++|+..+. +|+++|.++++++.++ ++|..
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~----~lGa~ 260 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAK----ELGAD 260 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH----HHTCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HcCCC
Confidence 578999999998755 5566777777775 9999999999988765 45754
No 364
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.86 E-value=0.25 Score=43.61 Aligned_cols=132 Identities=12% Similarity=0.062 Sum_probs=78.5
Q ss_pred CCCeEEeecCCCc-hHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCC-ceEEEecCccccch-hhhhhhhcccc
Q psy15212 132 SGMYVLDACSAPG-GKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNL-KATLILSDISKINL-KKLYIDINKKT 205 (329)
Q Consensus 132 ~g~~VLDlcag~G-~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~-~v~~~~~D~~~~~~-~~~~~~~~~~~ 205 (329)
.|..+|=.||+.+ |++..+|+.+ |.+|+.+|.+++.++.+.+.+++.+- ++..+..|.++... ..+ ++ ..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~-~~---~~ 80 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVING-FE---QI 80 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHH-HH---HH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHH-HH---HH
Confidence 4778898888653 5666666543 47999999999999999998888765 48888999887541 000 00 00
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
.. .-+..|.++.++-..+...+.... ...+.++.... ......+...+..+++.||.+|..+
T Consensus 81 ~~-----~~G~iD~lvnnAg~~~~~~~~~~~---~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 81 GK-----DVGNIDGVYHSIAFANMEDLRGRF---SETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp HH-----HHCCCSEEEECCCCCCGGGGTSCG---GGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred HH-----HhCCCCEEEecccccccccccccc---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 00 115799999887654332221111 11122222111 1122234456677888899888654
No 365
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.83 E-value=0.057 Score=49.98 Aligned_cols=49 Identities=18% Similarity=0.159 Sum_probs=37.5
Q ss_pred cCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++ +|++||-.|+|+ |..+.++|+..+. +|+++|.++++++.++ ++|..
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~----~~Ga~ 214 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK----KVGAD 214 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH----HHTCS
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCCC
Confidence 357 899999999854 5566677777776 9999999999888765 35654
No 366
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.77 E-value=0.053 Score=50.46 Aligned_cols=50 Identities=6% Similarity=0.023 Sum_probs=35.8
Q ss_pred CCC-CCCeEEeecCCC-chHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIR-SGMYVLDACSAP-GGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~-~g~~VLDlcag~-G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++ +|++||=.|+|+ |..+.++|+..+.+|+++|.++++++.+++ ++|..
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~ 227 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGAD 227 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCS
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCc
Confidence 567 999999998643 344555666666899999999988776542 46654
No 367
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=94.76 E-value=0.16 Score=45.44 Aligned_cols=73 Identities=15% Similarity=0.183 Sum_probs=51.4
Q ss_pred hhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 119 AAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 119 ~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
+.+|-....++. .|.++|=.|++ |+.+.++++.+ +.+|+.++.+...++.+.+.+...+..+.++.+|.++..
T Consensus 19 ~~~m~~~~~~~l-~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 94 (276)
T 3r1i_A 19 PGSMSVLDLFDL-SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPD 94 (276)
T ss_dssp ----CGGGGGCC-TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHH
T ss_pred CCCcccccccCC-CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 344433333333 36678877765 67777777654 369999999999999999988888877888899998754
No 368
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.71 E-value=0.47 Score=42.02 Aligned_cols=127 Identities=12% Similarity=0.036 Sum_probs=78.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCC------------hhHHHHHHHHHHHcCCceEEEecCccccchhh
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNN------------LSRLNMISENLKRLNLKATLILSDISKINLKK 196 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~------------~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~ 196 (329)
.|.+||=.|++ |+.+.++++.+ +.+|+.+|.+ ...++.+...+...+..+.++..|..+...
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-- 85 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA-- 85 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH--
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH--
Confidence 36677877765 56777777654 3699999987 778888888888877778899999987541
Q ss_pred hhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEE
Q psy15212 197 LYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLL 272 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lv 272 (329)
+.--.+ ..- . ..+..|.++.++-....+ . ..+.++.... ..-...+++.+...++.+|++|
T Consensus 86 v~~~~~-~~~---~--~~g~id~lv~nAg~~~~~-----~----~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 150 (287)
T 3pxx_A 86 VSRELA-NAV---A--EFGKLDVVVANAGICPLG-----A----HLPVQAFADAFDVDFVGVINTVHAALPYLTSGASII 150 (287)
T ss_dssp HHHHHH-HHH---H--HHSCCCEEEECCCCCCCC-----T----TCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEE
T ss_pred HHHHHH-HHH---H--HcCCCCEEEECCCcCccc-----C----cCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEE
Confidence 000000 000 0 014789999877543322 1 1122322222 2233457788888888899988
Q ss_pred EEcC
Q psy15212 273 FVTC 276 (329)
Q Consensus 273 ysTC 276 (329)
+.+.
T Consensus 151 ~isS 154 (287)
T 3pxx_A 151 TTGS 154 (287)
T ss_dssp EECC
T ss_pred Eecc
Confidence 8654
No 369
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=94.69 E-value=0.26 Score=42.80 Aligned_cols=86 Identities=14% Similarity=0.114 Sum_probs=58.4
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
+.++|=.| |+|+.+.++++.+ +.+|+.++.++..++.+.+.++..+.++.++..|..+... +.--.+. .
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~~~~~~-----~ 76 (247)
T 3lyl_A 5 EKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIES--IQNFFAE-----I 76 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHH--HHHHHHH-----H
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHH--HHHHHHH-----H
Confidence 55677666 4567777777653 3699999999999999999998888888899999987541 1000000 0
Q ss_pred cccCCCCCCEEEEccCCc
Q psy15212 210 RFYKNKYFDRILADLPCT 227 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCs 227 (329)
....+..|.++.++--.
T Consensus 77 -~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 77 -KAENLAIDILVNNAGIT 93 (247)
T ss_dssp -HHTTCCCSEEEECCCCC
T ss_pred -HHHcCCCCEEEECCCCC
Confidence 00124689999877543
No 370
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=94.69 E-value=0.3 Score=43.21 Aligned_cols=130 Identities=12% Similarity=0.178 Sum_probs=77.9
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-ChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-NLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
.|.++|=.|++ |+.+.++++.+ +.+|+.++. +...++.+.+.++..+..+.++.+|.++... +.--.+ ..-.
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~--v~~~~~-~~~~ 92 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPE--IVKLFD-QAVA 92 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHH--HHHHHH-HHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHH--HHHHHH-HHHH
Confidence 36677777754 66777777653 368888775 5677888888888888778889999987541 100000 0000
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
..+..|.++.++--...+.+. ..+.++.... ..-...+++.+.+.++.+|++|+.+.+
T Consensus 93 -----~~g~id~lvnnAg~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 93 -----HFGHLDIAVSNSGVVSFGHLK-------DVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp -----HHSCCCEEECCCCCCCCCCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred -----HcCCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 014689998776433222221 1233333222 223345677788888889998887553
No 371
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=94.68 E-value=0.047 Score=56.42 Aligned_cols=43 Identities=26% Similarity=0.088 Sum_probs=35.6
Q ss_pred CCeEEeecCCCchHHHHHHHhCC------CEEEEEeCChhHHHHHHHHH
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIAD------IKLISVDNNLSRLNMISENL 175 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~~------~~v~avD~~~~rl~~l~~n~ 175 (329)
.-+|||++||.||.++-+.+..+ -.++|+|+++.+++..+.|.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 35799999999999988876432 26799999999999988885
No 372
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.66 E-value=0.089 Score=49.10 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=36.3
Q ss_pred CCC-CCCeEEeecCCC-chHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIR-SGMYVLDACSAP-GGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~-~g~~VLDlcag~-G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++ +|++||=.|+|+ |..++++|+..+.+|+++|.++.+++.++ +++|..
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~---~~lGa~ 234 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL---KNFGAD 234 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH---HTSCCS
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HhcCCc
Confidence 566 899999998643 44455666666789999999999887654 245654
No 373
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.65 E-value=0.013 Score=54.10 Aligned_cols=66 Identities=14% Similarity=0.174 Sum_probs=43.3
Q ss_pred eEEE-ecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccc-cccccCCCCcccCChhHHHHHHHHHHHHHH
Q psy15212 182 ATLI-LSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGS-GVVRRNPDIPWLRRKNDIKKLSKYSCKILN 259 (329)
Q Consensus 182 v~~~-~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~-G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~ 259 (329)
..++ ++|+.... ..+.+++||+|++|||+... +. |.. ...+.......|.
T Consensus 39 ~~l~i~gD~l~~L----------------~~l~~~svDlI~tDPPY~~~~d~--------~~~----~~~~~~~~~~~l~ 90 (319)
T 1eg2_A 39 RHVYDVCDCLDTL----------------AKLPDDSVQLIICDPPYNIMLAD--------WDD----HMDYIGWAKRWLA 90 (319)
T ss_dssp EEEEEECCHHHHH----------------HTSCTTCEEEEEECCCSBCCGGG--------GGT----CSSHHHHHHHHHH
T ss_pred ceEEECCcHHHHH----------------HhCccCCcCEEEECCCCCCCCCC--------ccC----HHHHHHHHHHHHH
Confidence 5677 89987643 12345689999999998532 22 110 1112223456778
Q ss_pred HHHhcCCCCCEEEEEc
Q psy15212 260 NLWKMLKPGGKLLFVT 275 (329)
Q Consensus 260 ~a~~~LkpgG~lvysT 275 (329)
.+.++|+|||.+++..
T Consensus 91 ~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 91 EAERVLSPTGSIAIFG 106 (319)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHHcCCCeEEEEEc
Confidence 8899999999888763
No 374
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=94.61 E-value=0.31 Score=42.87 Aligned_cols=61 Identities=11% Similarity=0.169 Sum_probs=48.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.|+ +|+.+.++++.+ +.+|+.++.+...++.+.+.+...+..+.++.+|..+..
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 91 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSD 91 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHH
Confidence 4667887765 567888777654 369999999999999999998888877889999988754
No 375
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.58 E-value=0.079 Score=48.33 Aligned_cols=94 Identities=19% Similarity=0.292 Sum_probs=61.1
Q ss_pred CCC--CCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccc
Q psy15212 130 IRS--GMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKT 205 (329)
Q Consensus 130 ~~~--g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~ 205 (329)
+++ |+ ||=.|| +.|..+.++|+..+.+|++++.++++++.+++ +|....+-..|....
T Consensus 143 ~~~~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~------------- 204 (324)
T 3nx4_A 143 IRPQDGE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS----LGANRILSRDEFAES------------- 204 (324)
T ss_dssp CCGGGCC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH----HTCSEEEEGGGSSCC-------------
T ss_pred cCCCCCe-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEEEecCCHHHH-------------
Confidence 444 44 887775 45777788888888899999999999988764 676522211111111
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
.......+|.|+ | |+|. ..+..+++.|+++|+++..
T Consensus 205 ----~~~~~~~~d~v~-d--~~g~--------------------------~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 205 ----RPLEKQLWAGAI-D--TVGD--------------------------KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp ----CSSCCCCEEEEE-E--SSCH--------------------------HHHHHHHHTEEEEEEEEEC
T ss_pred ----HhhcCCCccEEE-E--CCCc--------------------------HHHHHHHHHHhcCCEEEEE
Confidence 111235789876 4 2321 1477888999999998864
No 376
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.50 E-value=0.37 Score=42.34 Aligned_cols=133 Identities=10% Similarity=0.062 Sum_probs=78.9
Q ss_pred CCCeEEeecCCCc-hHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCC-ceEEEecCccccch-hhhhhhhcccc
Q psy15212 132 SGMYVLDACSAPG-GKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNL-KATLILSDISKINL-KKLYIDINKKT 205 (329)
Q Consensus 132 ~g~~VLDlcag~G-~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~-~v~~~~~D~~~~~~-~~~~~~~~~~~ 205 (329)
.|.+||=.|++.| |.+.++++.+ +.+|+.++.+....+.+.+..+..+- .+.++.+|.++... ..+. + ..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~-~---~~ 81 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCF-A---SI 81 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHH-H---HH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHH-H---HH
Confidence 3668888887743 4666666543 46999999998888888877777765 48889999987541 0000 0 00
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.. ..+..|.++.++-....+.. .......+.+..... ..-...+++.+...++++|++|+.+.
T Consensus 82 ~~-----~~g~id~li~~Ag~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 82 KE-----QVGVIHGIAHCIAFANKEEL---VGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HH-----HHSCCCEEEECCCCCCGGGG---SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HH-----HhCCeeEEEEcccccccccc---ccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 00 01478999987754431110 011112223332222 22334577788888888998887653
No 377
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=94.47 E-value=0.4 Score=42.58 Aligned_cols=130 Identities=11% Similarity=0.092 Sum_probs=78.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-ChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-NLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
.|.++|=.|++ |+++.++++.+ +.+|+.++. +..+++.+.+.++..+..+.++.+|..+... +.-..+ ..-.
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~--v~~~~~-~~~~ 105 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEA--IEQAIR-ETVE 105 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH--HHHHHH-HHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH--HHHHHH-HHHH
Confidence 46678877765 56777776654 368888865 4577888888888888778889999887541 000000 0000
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
..+..|.++.++-....+.+. ..+.++.... ..-...+++.+.+.++.+|++|+.+.+
T Consensus 106 -----~~g~iD~lvnnAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~ 167 (271)
T 3v2g_A 106 -----ALGGLDILVNSAGIWHSAPLE-------ETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN 167 (271)
T ss_dssp -----HHSCCCEEEECCCCCCCCCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred -----HcCCCcEEEECCCCCCCCChh-------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence 014789999877433222221 1223333222 122345677788888889998887543
No 378
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.44 E-value=0.076 Score=48.57 Aligned_cols=49 Identities=12% Similarity=0.118 Sum_probs=38.2
Q ss_pred CCCCCC-eEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIRSGM-YVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g~-~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
++++|+ +||-.|| |.|..+.++|+..+.+|++++.++++++.++ ++|..
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~----~lGa~ 196 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAK 196 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCS
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HcCCc
Confidence 577886 8999887 4566777788777888999999999988764 36765
No 379
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.34 E-value=0.041 Score=51.10 Aligned_cols=50 Identities=14% Similarity=0.136 Sum_probs=37.7
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
..+++|++||-.|+ |-|..+.++|+..+.+|+++|.++++++.+++ +|..
T Consensus 163 ~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~ 214 (353)
T 4dup_A 163 AGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LGAK 214 (353)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCS
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCC
Confidence 35789999998743 33556667777777899999999999887764 5654
No 380
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.33 E-value=0.054 Score=49.03 Aligned_cols=48 Identities=17% Similarity=0.263 Sum_probs=38.1
Q ss_pred CCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 130 IRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 130 ~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
+++|++||-.|+ |.|..+.++|+..+.+|+++|.++++++.++ ++|..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~ga~ 172 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGAE 172 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTCS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hcCCC
Confidence 789999999987 3466677777777789999999999988764 35654
No 381
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=94.32 E-value=0.17 Score=44.48 Aligned_cols=127 Identities=16% Similarity=0.131 Sum_probs=74.6
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-ChhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-NLSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~~ 206 (329)
.+.+||=.| |+|+.+.++++.+ +.+|++++. ++..++.+.+.++..+..+.++.+|..+... ..+. . . ..
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~-~--~-~~ 94 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALF-D--K-AV 94 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH-H--H-HH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH-H--H-HH
Confidence 356777665 5688888887654 369999998 8888888877787777778888999887531 0000 0 0 00
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
. .-+.+|.|+..+-....+.+ ...+.++.... ..-...+++.+.+.++.+|++|+.+
T Consensus 95 ~-----~~~~~d~vi~~Ag~~~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 155 (274)
T 1ja9_A 95 S-----HFGGLDFVMSNSGMEVWCDE-------LEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS 155 (274)
T ss_dssp H-----HHSCEEEEECCCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred H-----HcCCCCEEEECCCCCCCccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEc
Confidence 0 01368999876643322211 11222322222 1223445666666666668888764
No 382
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=94.31 E-value=0.48 Score=41.20 Aligned_cols=61 Identities=15% Similarity=0.085 Sum_probs=48.3
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.|+ +|+.+.++++.+ +.+|+.+|.+...++.+.+.+...+..+.++.+|.++..
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 71 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPE 71 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH
Confidence 3667777765 567777777654 369999999999999999988887777888899998754
No 383
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=94.27 E-value=0.17 Score=44.51 Aligned_cols=126 Identities=13% Similarity=0.147 Sum_probs=75.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.|.++|=.|++ |+.+.++++.+ +.+|+.+|.++..++.+.+.+ +..+.++..|..+... +.--.+ ....
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~--v~~~~~-~~~~- 78 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNE--IAVLGA-AAGQ- 78 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHH--HHHHHH-HHHH-
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHH--HHHHHH-HHHH-
Confidence 46678877755 66777777654 369999999998887766554 4457888999887541 100000 0000
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
..+..|.++.++-.+..+.+. ..+.++.... ..-...+++.+...++.+|++|+.+.
T Consensus 79 ----~~g~id~lv~nAg~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 79 ----TLGAIDLLHINAGVSELEPFD-------QVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp ----HHSSEEEEEECCCCCCCBCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred ----HhCCCCEEEECCCCCCCCChh-------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 014689998877544333222 1223333222 22234567778888888898887643
No 384
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=94.24 E-value=0.29 Score=42.72 Aligned_cols=128 Identities=10% Similarity=0.032 Sum_probs=76.5
Q ss_pred CCCeEEeecCCCchHHHHHHHh----CCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEI----ADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~----~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
.+.+||=.| |+|+.+.++++. .+.+|+.++.+...++.+.+.+...+..+.++.+|..+... +.-.... ..
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~--~~~~~~~-~~- 77 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQS--IRALRDF-LR- 77 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHH--HHHHHHH-HH-
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHH--HHHHHHH-HH-
Confidence 355677555 667888887754 34699999999998888888887777668888999887531 1000000 00
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCC-hhHHHH----HHHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRR-KNDIKK----LSKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~-~~~~~~----l~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
. ..+.+|.|+..+-....+. .... .++... ...-...+++.+.+.++++|++|+.+.
T Consensus 78 --~--~~g~id~li~~Ag~~~~~~--------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 78 --K--EYGGLDVLVNNAGIAFKVA--------DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp --H--HHSSEEEEEECCCCCCCTT--------CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred --H--hcCCCCEEEECCcccccCC--------CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 0 0136899998764332111 0011 122221 122334577778888877888888754
No 385
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=94.18 E-value=0.33 Score=42.36 Aligned_cols=60 Identities=12% Similarity=0.146 Sum_probs=46.5
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
|.++|=.|+ +|+.+.++++.+ +.+|+.++.++..++.+.+.+...+..+.++.+|..+..
T Consensus 7 ~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~ 69 (247)
T 2jah_A 7 GKVALITGA-SSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQ 69 (247)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence 567777775 467777777653 369999999999998888888777767888899988754
No 386
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=94.15 E-value=0.23 Score=43.57 Aligned_cols=86 Identities=6% Similarity=-0.042 Sum_probs=58.6
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.|.++|=.|++ ||.+.++++.+ |.+|+.+|.+..+++.+.+.++..+..+.++.+|.++... +.--.+ .
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~--v~~~~~-----~ 77 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDE--VTAFLN-----A 77 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHH--HHHHHH-----H
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHH--HHHHHH-----H
Confidence 35677777665 56777776653 3699999999999999999998888778899999987541 100000 0
Q ss_pred ccccCCCCCCEEEEccCCc
Q psy15212 209 FRFYKNKYFDRILADLPCT 227 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCs 227 (329)
.. -. +..|.++.++-..
T Consensus 78 ~~-~~-g~id~lv~nAg~~ 94 (252)
T 3h7a_A 78 AD-AH-APLEVTIFNVGAN 94 (252)
T ss_dssp HH-HH-SCEEEEEECCCCC
T ss_pred HH-hh-CCceEEEECCCcC
Confidence 00 01 4789999877544
No 387
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.09 E-value=0.089 Score=50.70 Aligned_cols=50 Identities=12% Similarity=0.109 Sum_probs=39.4
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||=.|| |-|..++++|+..+.++++++.++.+++.++ ++|..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~----~lGa~ 275 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR----AMGAE 275 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HHTCC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH----hhCCc
Confidence 46789999998886 3466777788878889999999999988764 46765
No 388
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=94.07 E-value=0.3 Score=43.43 Aligned_cols=61 Identities=10% Similarity=0.044 Sum_probs=47.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|..+|=.| |+|+.+.++++.+ +.+|+.++.+...++.+.+.+...+..+..+..|..+..
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 90 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDAT 90 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHH
Confidence 366777666 5567777777653 369999999999999999988888888888889988754
No 389
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.02 E-value=0.039 Score=51.35 Aligned_cols=49 Identities=12% Similarity=0.087 Sum_probs=35.9
Q ss_pred CCCCC------CeEEeecCCC-chHH-HHHH-HhCCCE-EEEEeCChh---HHHHHHHHHHHcCCc
Q psy15212 129 DIRSG------MYVLDACSAP-GGKT-CHLL-EIADIK-LISVDNNLS---RLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g------~~VLDlcag~-G~kt-~~la-~~~~~~-v~avD~~~~---rl~~l~~n~~~~g~~ 181 (329)
.+++| ++||-.|+|+ |..+ +++| +..+.+ |+++|.+++ +++.++ ++|..
T Consensus 163 ~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~ 224 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE----ELDAT 224 (357)
T ss_dssp HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH----HTTCE
T ss_pred CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH----HcCCc
Confidence 46789 9999999843 4455 6666 666655 999999998 887654 46754
No 390
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=94.02 E-value=0.31 Score=43.24 Aligned_cols=60 Identities=13% Similarity=0.157 Sum_probs=47.1
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
+.++|=.|++ ||.+.++++.+ |.+|+.++.+..+++.+.+.++..+..+.++..|.++..
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~ 66 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRH 66 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHH
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH
Confidence 5567766655 66777777654 369999999999999999988888777888889988754
No 391
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.99 E-value=0.47 Score=42.62 Aligned_cols=132 Identities=11% Similarity=0.045 Sum_probs=75.8
Q ss_pred CCCeEEeecCCCc-hHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhccccc
Q psy15212 132 SGMYVLDACSAPG-GKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag~G-~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~~ 206 (329)
.|.++|=.|++.| |.+.++++.+ +.+|+.++.++...+.+++..+..+ .+.++.+|.++... ..+.-.. .
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~----~ 104 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG-AFVAGHCDVADAASIDAVFETL----E 104 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT-CEEEEECCTTCHHHHHHHHHHH----H
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CceEEECCCCCHHHHHHHHHHH----H
Confidence 4778999998764 5666666543 3699999999776666666665554 46788899887541 0000000 0
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
. ..+..|.++.++--...+.+ ....+..+.++.... ..-...+++.+...++.+|++|+.+.
T Consensus 105 ---~--~~g~iD~lVnnAG~~~~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 105 ---K--KWGKLDFLVHAIGFSDKDEL---TGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp ---H--HTSCCSEEEECCCCCCHHHH---TSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred ---H--hcCCCCEEEECCccCCcccc---cccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 0 11478999987643321000 000112223333222 22334567777888888998887653
No 392
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.99 E-value=0.2 Score=45.93 Aligned_cols=46 Identities=13% Similarity=0.138 Sum_probs=35.9
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISE 173 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~ 173 (329)
.++++|++||-.|+ |-|..+.+++...+.+|+++|.++++++.+++
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK 188 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 35789999999885 45556666676677899999999988887754
No 393
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=93.98 E-value=0.14 Score=55.81 Aligned_cols=94 Identities=16% Similarity=0.173 Sum_probs=59.4
Q ss_pred CCeEEeecCCCchHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIADI--KLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRFR 210 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~~~--~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
.-+++|++||.||.++-+-+ .|. .+.|+|+++..++..+.|.. ...++..|...+....+.-++.......+
T Consensus 851 ~l~viDLFsG~GGlslGfe~-AG~~~vv~avEid~~A~~ty~~N~p----~~~~~~~DI~~l~~~~~~gdi~~~~~~~l- 924 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQ-AGISETLWAIEMWDPAAQAFRLNNP----GTTVFTEDCNVLLKLVMAGEVTNSLGQRL- 924 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHH-TTSEEEEEEECCSHHHHHHHHHHCT----TSEEECSCHHHHHHHHTTTCSBCSSCCBC-
T ss_pred CceEEecccCccHHHHHHHH-CCCCceEEEEECCHHHHHHHHHhCC----CCcEeeccHHHHhHhhhccchhhhhhhhc-
Confidence 35799999999999998875 442 58899999999999888842 13466666554310000000000000111
Q ss_pred ccCCCCCCEEEEccCCccccccc
Q psy15212 211 FYKNKYFDRILADLPCTGSGVVR 233 (329)
Q Consensus 211 ~~~~~~fD~Vl~D~PCsg~G~~~ 233 (329)
...+.+|+|+--|||.+....+
T Consensus 925 -p~~~~vDvl~GGpPCQ~FS~ag 946 (1330)
T 3av4_A 925 -PQKGDVEMLCGGPPCQGFSGMN 946 (1330)
T ss_dssp -CCTTTCSEEEECCCCTTTCSSS
T ss_pred -cccCccceEEecCCCccccccc
Confidence 1124789999999998776554
No 394
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=93.98 E-value=0.41 Score=42.30 Aligned_cols=61 Identities=25% Similarity=0.109 Sum_probs=47.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.+.+||=.| |+|+.+.++++.+ +.+|+++|.++..++.+.+.++..+..+.++.+|..+..
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~ 93 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRE 93 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHH
Confidence 356777666 4577888887654 369999999999998888888777767888999988753
No 395
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.98 E-value=0.12 Score=47.89 Aligned_cols=50 Identities=12% Similarity=0.208 Sum_probs=37.3
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||-.|| |.|..+.+++...+.+|+++|.++++++.+ +++|..
T Consensus 166 ~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~ 217 (351)
T 1yb5_A 166 ACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAH 217 (351)
T ss_dssp SCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCS
T ss_pred hCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH----HHcCCC
Confidence 45789999999986 345556666666678999999999988754 345654
No 396
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=93.97 E-value=0.29 Score=42.94 Aligned_cols=128 Identities=9% Similarity=0.053 Sum_probs=75.5
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.|.++|=.|++ |+.+.++++.+ +.+|+.+|.+...++.+.+.+...+.++.++..|..+...-.-.+. ..-.
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~---~~~~- 85 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIK---AALD- 85 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH---HHHH-
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH---HHHH-
Confidence 35677766654 66777777654 3699999999999999999888888778889999987541000000 0000
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCC--CCCEEEEEcC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLK--PGGKLLFVTC 276 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~Lk--pgG~lvysTC 276 (329)
..+..|.++.++--...+.+ ..+.++.... ..-...+++.+.+.++ .+|++|+.+.
T Consensus 86 ----~~g~id~lv~nAg~~~~~~~--------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS 147 (256)
T 3gaf_A 86 ----QFGKITVLVNNAGGGGPKPF--------DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISS 147 (256)
T ss_dssp ----HHSCCCEEEECCCCCCCCCT--------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ----HcCCCCEEEECCCCCCCCCC--------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 01478999987754332222 1223332222 1222345555555443 4678887643
No 397
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=93.95 E-value=0.27 Score=43.50 Aligned_cols=61 Identities=13% Similarity=0.202 Sum_probs=46.5
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHH-cCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKR-LNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~-~g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.|+ +|+.+.++++.+ +.+|+.++.+...++.+.+.+.. .+.++.++..|..+..
T Consensus 19 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~ 83 (266)
T 4egf_A 19 DGKRALITGA-TKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPD 83 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTT
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 3667776665 466777777654 36999999999999888877766 5767889999998754
No 398
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=93.94 E-value=0.16 Score=45.95 Aligned_cols=77 Identities=14% Similarity=0.086 Sum_probs=46.3
Q ss_pred EechhHHHHhhhcCC--------CCCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcC-CceE
Q psy15212 116 IQDAAAQLAAPLLDI--------RSGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLN-LKAT 183 (329)
Q Consensus 116 ~Qd~~s~l~~~~l~~--------~~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g-~~v~ 183 (329)
.||+++++......+ -.|.+||=.|+ +|+++.++++.+ +.+|+.+|.+...++.+.+.+...+ ..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~m~~l~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~ 94 (293)
T 3rih_A 16 TQGPGSMLVVESAEPAERKVMFDLSARSVLVTGG-TKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVI 94 (293)
T ss_dssp ------------------CCTTCCTTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEE
T ss_pred hcCCceeeeecCCCCcccccccCCCCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEE
Confidence 456666655432221 13556776665 567777777653 3699999999999998888887776 3588
Q ss_pred EEecCccccc
Q psy15212 184 LILSDISKIN 193 (329)
Q Consensus 184 ~~~~D~~~~~ 193 (329)
++.+|.++..
T Consensus 95 ~~~~Dv~d~~ 104 (293)
T 3rih_A 95 GVRLDVSDPG 104 (293)
T ss_dssp EEECCTTCHH
T ss_pred EEEEeCCCHH
Confidence 8899998754
No 399
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.93 E-value=0.58 Score=41.30 Aligned_cols=61 Identities=13% Similarity=0.192 Sum_probs=45.0
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHH-HHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENL-KRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~-~~~g~~v~~~~~D~~~~~ 193 (329)
.|.++|=.|+ +|+.+.++++.+ +.+|++++.++..++.+.+.+ +..+..+.++.+|..+..
T Consensus 20 ~~k~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~ 84 (267)
T 1vl8_A 20 RGRVALVTGG-SRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE 84 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 3567776665 577887777654 369999999999888777766 455666788889988753
No 400
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=93.87 E-value=0.51 Score=41.31 Aligned_cols=61 Identities=16% Similarity=0.164 Sum_probs=46.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.|+ +|+.+.++++.+ +.+|++++.++..++.+.+.+...+..+.++.+|..+..
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 71 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRS 71 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH
Confidence 3667886665 577777777653 369999999999988887777776766788889988753
No 401
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.76 E-value=0.17 Score=48.38 Aligned_cols=50 Identities=12% Similarity=0.102 Sum_probs=38.4
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||=.|| |-|..++++|+..+.+|++++.++++++.++ ++|..
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~----~lGa~ 267 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR----ALGCD 267 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCC
Confidence 46789999998886 3355666777777789999999999988764 46765
No 402
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.70 E-value=0.062 Score=49.58 Aligned_cols=46 Identities=22% Similarity=0.239 Sum_probs=36.1
Q ss_pred hcCCCCCCeEEeecCCC-chHHHHHHHhCCC-EEEEEeCChhHHHHHHH
Q psy15212 127 LLDIRSGMYVLDACSAP-GGKTCHLLEIADI-KLISVDNNLSRLNMISE 173 (329)
Q Consensus 127 ~l~~~~g~~VLDlcag~-G~kt~~la~~~~~-~v~avD~~~~rl~~l~~ 173 (329)
..++ +|++||-.|+|+ |..++++|+..+. +|+++|.++++++.+++
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 3457 899999999854 5566677777776 89999999998876654
No 403
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=93.67 E-value=0.52 Score=42.33 Aligned_cols=128 Identities=10% Similarity=-0.017 Sum_probs=77.3
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCC--hhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhcccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNN--LSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKT 205 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~--~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~ 205 (329)
.|.++|=.|+ +|+.+.++++.+ +.+|+.++.+ ....+.+.+.++..+..+.++.+|..+... ..+. + ..
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~-~---~~ 122 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLV-H---KA 122 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHH-H---HH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHH-H---HH
Confidence 3667887775 567787777654 3689999886 456777777778778778888999887541 0000 0 00
Q ss_pred cccccccCCCCCCEEEEccCCcc-ccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTG-SGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg-~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.. ..+..|.++.++--.. .+.+ ...+.++.... ..-...+++.+...++.+|++|+.+.
T Consensus 123 ~~-----~~g~iD~lv~nAg~~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 123 RE-----ALGGLDILALVAGKQTAIPEI-------KDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HH-----HHTCCCEEEECCCCCCCCSSG-------GGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HH-----HcCCCCEEEECCCCcCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 00 0147899998764221 1111 11223332222 22334577888888998999888653
No 404
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.67 E-value=0.14 Score=46.67 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=33.8
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISE 173 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~ 173 (329)
.++++|++||-.|+ |-|..+.+++...+.+|+++|.++++++.+++
T Consensus 136 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 136 YEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 45788999999884 33444455555556799999999998887754
No 405
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.62 E-value=0.36 Score=42.93 Aligned_cols=128 Identities=15% Similarity=0.152 Sum_probs=74.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-------------ChhHHHHHHHHHHHcCCceEEEecCccccch-
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-------------NLSRLNMISENLKRLNLKATLILSDISKINL- 194 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-------------~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~- 194 (329)
.|.++|=.|++ |+.+.++++.+ +.+|+.+|. +...++.+.+.+...+..+.++..|..+...
T Consensus 14 ~gk~~lVTGas-~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 14 QGRVAFITGAA-RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 46677777765 56777777653 369999998 7888888888888878778888999887541
Q ss_pred hhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCC---C
Q psy15212 195 KKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLK---P 267 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~Lk---p 267 (329)
..+. . ..-. ..+..|.++.++--...+.+ +..+.++.... ..-...+++.+...++ .
T Consensus 93 ~~~~-~---~~~~-----~~g~id~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 156 (280)
T 3pgx_A 93 RELV-A---DGME-----QFGRLDVVVANAGVLSWGRV-------WELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN 156 (280)
T ss_dssp HHHH-H---HHHH-----HHCCCCEEEECCCCCCCBCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred HHHH-H---HHHH-----HcCCCCEEEECCCCCCCCCc-------ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 0000 0 0000 01478999987754332222 12233333222 1222345555555543 3
Q ss_pred CCEEEEEcC
Q psy15212 268 GGKLLFVTC 276 (329)
Q Consensus 268 gG~lvysTC 276 (329)
+|++|+.+.
T Consensus 157 ~g~iv~isS 165 (280)
T 3pgx_A 157 GGSIVVVSS 165 (280)
T ss_dssp CEEEEEECC
T ss_pred CCEEEEEcc
Confidence 788887653
No 406
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=93.57 E-value=0.75 Score=41.16 Aligned_cols=128 Identities=12% Similarity=0.071 Sum_probs=76.3
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChh-HHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLS-RLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~-rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~~ 206 (329)
.|.+||=.|++ |+.+.++++.+ +.+|+.++.+.. ..+.+.+.++..+..+.++.+|..+... ..+. + ..-
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~-~---~~~ 120 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIV-Q---ETV 120 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHH-H---HHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH-H---HHH
Confidence 36678877754 66777777654 369999999875 4556666677777778899999987541 0000 0 000
Q ss_pred ccccccCCCCCCEEEEccCCccc-cccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGS-GVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~-G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
. ..+..|.++.++--... +.+ ...+.++.... ..-...+++.+.+.++.+|++|+.+.
T Consensus 121 ~-----~~g~iD~lvnnAg~~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 121 R-----QLGSLNILVNNVAQQYPQQGL-------EYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp H-----HHSSCCEEEECCCCCCCCSSG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred H-----HcCCCCEEEECCCCcCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 0 01468999987642211 111 11223333222 22345677888888899999888654
No 407
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.52 E-value=0.13 Score=52.18 Aligned_cols=122 Identities=19% Similarity=0.265 Sum_probs=73.4
Q ss_pred CCeEEeecCCCchHHHHHHHhC----------C---CEEEEEeC---ChhHHHHH-----------HHHHHHcC------
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA----------D---IKLISVDN---NLSRLNMI-----------SENLKRLN------ 179 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~----------~---~~v~avD~---~~~rl~~l-----------~~n~~~~g------ 179 (329)
.-+|||+|-|+|...+...+.. . -+++++|. +.+-+..+ ++.++.+.
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3489999999999887775532 1 37899999 55555421 12233332
Q ss_pred ---------CceEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH
Q psy15212 180 ---------LKATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL 250 (329)
Q Consensus 180 ---------~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l 250 (329)
+.+++..+|+...- +.+ .......||.|++|+-.. .++|++ |.
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l-~~~------------~~~~~~~~d~~~~D~f~p-----~~np~~-w~--------- 198 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELT-SQL------------DDSLNQKVDAWFLDGFAP-----AKNPDM-WT--------- 198 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHG-GGB------------CGGGTTCEEEEEECCSCG-----GGCGGG-SC---------
T ss_pred eEEEecCCcEEEEEecCCHHHHH-Hhc------------ccccCCcccEEEECCCCC-----cCChhh-hh---------
Confidence 11345556665432 110 000135799999998533 456763 32
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEcCCCCccccHHHHHHHHhh
Q psy15212 251 SKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 293 (329)
Q Consensus 251 ~~~q~~lL~~a~~~LkpgG~lvysTCS~~~~Ene~vv~~~l~~ 293 (329)
.+++...+++++|||++...+|. ..|+..|..
T Consensus 199 ----~~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~L~~ 230 (676)
T 3ps9_A 199 ----QNLFNAMARLARPGGTLATFTSA-------GFVRRGLQD 230 (676)
T ss_dssp ----HHHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHH
T ss_pred ----HHHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHh
Confidence 35788888899999988755444 345555554
No 408
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=93.42 E-value=0.46 Score=42.06 Aligned_cols=61 Identities=15% Similarity=0.131 Sum_probs=46.9
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.++|=.|+ +|+.+.++++.+ +.+|++++.++..++.+.+.+...+..+.++.+|..+..
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 83 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRT 83 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence 3667787775 567777777654 369999999999988887777777767888899988754
No 409
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.41 E-value=0.25 Score=44.07 Aligned_cols=126 Identities=12% Similarity=0.128 Sum_probs=79.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHhC------C--CEEEEEeC-----Ch----------------------hHHHH---HH
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIA------D--IKLISVDN-----NL----------------------SRLNM---IS 172 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~------~--~~v~avD~-----~~----------------------~rl~~---l~ 172 (329)
-|| .|+++|+.-|+-+..++... + .+|+++|. .. +.++. ..
T Consensus 69 vpG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 69 VPG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp SCS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 355 99999999999988877531 1 69999993 21 01221 11
Q ss_pred HHHHHcCC--c-eEEEecCccccchhhhhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHH
Q psy15212 173 ENLKRLNL--K-ATLILSDISKINLKKLYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKK 249 (329)
Q Consensus 173 ~n~~~~g~--~-v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~ 249 (329)
+|.+++|. . ++++.+++.+.- +.+. ...+..+||.|.+|+--.
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL-~~~l-----------~~~~~~~~dlv~ID~D~Y---------------------- 193 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETV-PRYL-----------AENPQTVIALAYFDLDLY---------------------- 193 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHH-HHHH-----------HHCTTCCEEEEEECCCCH----------------------
T ss_pred hhhhhcCCCCCcEEEEEecHHHHH-HHHH-----------HhCCCCceEEEEEcCccc----------------------
Confidence 22335665 2 899999987642 1110 001345799999997410
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEcCCC--CccccHHHHHHHHhhC
Q psy15212 250 LSKYSCKILNNLWKMLKPGGKLLFVTCSL--WFEESEEQAIIFSKNH 294 (329)
Q Consensus 250 l~~~q~~lL~~a~~~LkpgG~lvysTCS~--~~~Ene~vv~~~l~~~ 294 (329)
.-....++.++..|+|||.+++-.... .+.+. ..+..|+.++
T Consensus 194 --~~t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~~-~A~~ef~~~~ 237 (257)
T 3tos_A 194 --EPTKAVLEAIRPYLTKGSIVAFDELDNPKWPGEN-IAMRKVLGLD 237 (257)
T ss_dssp --HHHHHHHHHHGGGEEEEEEEEESSTTCTTCTHHH-HHHHHHTCTT
T ss_pred --chHHHHHHHHHHHhCCCcEEEEcCCCCCCChHHH-HHHHHHHhhC
Confidence 012456788899999999999887632 45444 4567777766
No 410
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=93.38 E-value=0.45 Score=41.56 Aligned_cols=60 Identities=13% Similarity=0.065 Sum_probs=44.8
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
+.++|=.| |+|+.+.++++.+ +.+|++++.++..++.+.+.+...+..+.++.+|..+..
T Consensus 2 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 64 (256)
T 1geg_A 2 KKVALVTG-AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRD 64 (256)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 34566666 4567787777653 369999999999888888777776766788889988753
No 411
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=93.37 E-value=0.52 Score=41.30 Aligned_cols=60 Identities=7% Similarity=0.075 Sum_probs=46.5
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
|.++|=.|+ +|+.+.++++.+ +.+|+.+|.++..++.+.+.++..+..+.++.+|.++..
T Consensus 6 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 68 (257)
T 3imf_A 6 EKVVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTD 68 (257)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH
Confidence 556776665 567777777654 369999999999999888888777767888999998754
No 412
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=93.34 E-value=0.5 Score=41.07 Aligned_cols=61 Identities=8% Similarity=0.072 Sum_probs=47.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.+.+||=.| |+|+.+.++++.+ +.+|++++.++..++.+.+.++..+.++.++.+|..+..
T Consensus 12 ~~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~ 75 (260)
T 3awd_A 12 DNRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTE 75 (260)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHH
Confidence 356777666 4577888887654 369999999999888887777777767888999988754
No 413
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=93.33 E-value=0.44 Score=41.49 Aligned_cols=60 Identities=15% Similarity=0.126 Sum_probs=45.2
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-ChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-NLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
|.+||=.| |+|+.+.++++.+ +.+|++++. ++..++.+.+.+...+..+.++.+|..+..
T Consensus 7 ~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~ 70 (261)
T 1gee_A 7 GKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVES 70 (261)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHH
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence 56777666 4577888877653 369999999 888888877777776666788889988753
No 414
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=93.31 E-value=0.47 Score=41.81 Aligned_cols=129 Identities=11% Similarity=0.095 Sum_probs=75.3
Q ss_pred CCCeEEeecCCCchHHHHHHHhCC---CEEEEEeCC---hhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIAD---IKLISVDNN---LSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKT 205 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~~---~~v~avD~~---~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~ 205 (329)
.|.++|=.|++ |+.+.++++.+- .+|+.++.+ ..+++.+.+.+...+.++.++..|.++... +.--.+ ..
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~--v~~~~~-~~ 85 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEE--VAKLFD-FA 85 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHH--HHHHHH-HH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH--HHHHHH-HH
Confidence 36678877765 667877776543 688888764 446666666666667678889999987541 100000 00
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.. ..+..|.++.++-....+.+. ..+.++.... ..-...+++.+...++++|++|+.+.
T Consensus 86 ~~-----~~g~iD~lvnnAg~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 86 EK-----EFGKVDIAINTVGKVLKKPIV-------ETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HH-----HHCSEEEEEECCCCCCSSCGG-------GCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred HH-----HcCCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 00 014689999876433222221 1233333222 22334577788888888898887654
No 415
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=93.25 E-value=0.55 Score=40.28 Aligned_cols=60 Identities=15% Similarity=0.087 Sum_probs=45.3
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHH-HcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLK-RLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~-~~g~~v~~~~~D~~~~~ 193 (329)
+.++|=.|+ +|+.+.++++.+ +.+|+.++.+..+++.+.+.+. ..+..+.++.+|.++..
T Consensus 2 ~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 65 (235)
T 3l77_A 2 MKVAVITGA-SRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAE 65 (235)
T ss_dssp CCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHH
Confidence 445666664 567787777654 3699999999999988877775 55767889999998754
No 416
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.17 E-value=0.24 Score=45.85 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=34.0
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMIS 172 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~ 172 (329)
.++++|++||-.|+ |-|..+.+++...+.+|+++|.++++++.++
T Consensus 158 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 204 (354)
T 2j8z_A 158 GNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE 204 (354)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred cCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 35788999999874 3344555666666689999999999988763
No 417
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=93.15 E-value=0.37 Score=42.79 Aligned_cols=61 Identities=13% Similarity=0.164 Sum_probs=48.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.++|=.| |+|+.+.++++.+ +.+|+.+|.++..++.+.+.++..+..+.++.+|..+..
T Consensus 25 ~gk~~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~ 88 (271)
T 4ibo_A 25 GGRTALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSES 88 (271)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 366777666 4567777777654 369999999999999998888888877888899988754
No 418
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.15 E-value=0.47 Score=41.77 Aligned_cols=61 Identities=13% Similarity=0.125 Sum_probs=48.2
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.++|=.|++ |+.+.++++.+ +.+|+.+|.+...++.+.+.+...+..+.++.+|.++..
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 73 (264)
T 3ucx_A 10 TDKVVVISGVG-PALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDA 73 (264)
T ss_dssp TTCEEEEESCC-TTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCcEEEEECCC-cHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH
Confidence 46678877765 55676666543 369999999999999999998888877889999998754
No 419
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=93.13 E-value=0.55 Score=40.59 Aligned_cols=61 Identities=16% Similarity=0.146 Sum_probs=46.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.| |+|+.+.++++.+ +.+|++++.++..++.+.+.++..+..+.++.+|..+..
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 73 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ 73 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHH
Confidence 356777665 5688888887653 369999999999888888888777766788889988753
No 420
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=93.12 E-value=0.8 Score=40.82 Aligned_cols=129 Identities=10% Similarity=0.083 Sum_probs=76.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChh-------HHHHHHHHHHHcCCceEEEecCccccchhhhhhhh
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLS-------RLNMISENLKRLNLKATLILSDISKINLKKLYIDI 201 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~-------rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~ 201 (329)
.|..+|=.|++ |+.+.++++.+ +.+|+.++.+.. .++.+.+.++..+..+.++.+|.++... +.--.
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~--v~~~~ 84 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDA--VAAAV 84 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHH--HHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHH--HHHHH
Confidence 35677777765 56777776653 369999999877 5677777777777778889999987541 10000
Q ss_pred cccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCC--CCEEEEEc
Q psy15212 202 NKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKP--GGKLLFVT 275 (329)
Q Consensus 202 ~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~Lkp--gG~lvysT 275 (329)
+. .- . ..+..|.++.++-....+.+. ..+.++.... ..-...+.+.+...++. +|++|+.+
T Consensus 85 ~~-~~---~--~~g~id~lvnnAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~is 151 (285)
T 3sc4_A 85 AK-TV---E--QFGGIDICVNNASAINLGSIE-------EVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLS 151 (285)
T ss_dssp HH-HH---H--HHSCCSEEEECCCCCCCCCTT-------TSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECC
T ss_pred HH-HH---H--HcCCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence 00 00 0 014799999877433222221 1233333322 22334567777777764 57888765
Q ss_pred C
Q psy15212 276 C 276 (329)
Q Consensus 276 C 276 (329)
.
T Consensus 152 S 152 (285)
T 3sc4_A 152 P 152 (285)
T ss_dssp C
T ss_pred C
Confidence 4
No 421
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=93.11 E-value=0.86 Score=40.40 Aligned_cols=61 Identities=15% Similarity=0.076 Sum_probs=47.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCC---ceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNL---KATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~---~v~~~~~D~~~~~ 193 (329)
.|.+||=.|+ +|+.+.++++.+ +.+|+.+|.++..++.+.+.++..+. .+.++.+|.++..
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~ 76 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNED 76 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHH
Confidence 3667787775 566777777653 36999999999999998888887765 4788889988754
No 422
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=93.09 E-value=0.8 Score=41.11 Aligned_cols=132 Identities=8% Similarity=0.026 Sum_probs=77.7
Q ss_pred CCCeEEeecCCC-chHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhccccc
Q psy15212 132 SGMYVLDACSAP-GGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag~-G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~~ 206 (329)
.|.+||=.|++. ++.+.++++.+ +.+|+.+|.++...+.+.+..+..+- +.++.+|.++... ..+. + ...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~-~---~~~ 103 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGV-KLTVPCDVSDAESVDNMF-K---VLA 103 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTC-CEEEECCTTCHHHHHHHH-H---HHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC-eEEEEcCCCCHHHHHHHH-H---HHH
Confidence 467889888864 57777776653 36999999998877777777666553 5778899887541 0000 0 000
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
. ..+..|.++.++-......+. .+ .+..+.++.... ..-...+++.+...++.+|++|+.+.
T Consensus 104 ~-----~~g~iD~lVnnAG~~~~~~~~-~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 104 E-----EWGSLDFVVHAVAFSDKNELK-GR--YVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp H-----HHSCCSEEEECCCCCCHHHHT-SC--GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred H-----HcCCCCEEEECCCcCCccccc-CC--hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 0 014789999877543220000 00 112233333222 22334577788888888998888643
No 423
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=93.06 E-value=0.71 Score=41.95 Aligned_cols=87 Identities=9% Similarity=0.094 Sum_probs=56.2
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCC------------hhHHHHHHHHHHHcCCceEEEecCccccch-h
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNN------------LSRLNMISENLKRLNLKATLILSDISKINL-K 195 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~------------~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~ 195 (329)
.|.+||=.|++ |+++.++++.+ +.+|+.+|.+ ...++.+.+.+...+..+.++.+|..+... .
T Consensus 45 ~gk~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 45 QGKVAFITGAA-RGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 36677766654 66777776654 3699999986 677777777777777778899999987541 0
Q ss_pred hhhhhhcccccccccccCCCCCCEEEEccCCcc
Q psy15212 196 KLYIDINKKTNNRFRFYKNKYFDRILADLPCTG 228 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg 228 (329)
.+. . ..-. ..+..|.++.++-.+.
T Consensus 124 ~~~-~---~~~~-----~~g~iD~lVnnAg~~~ 147 (317)
T 3oec_A 124 AVV-D---EALA-----EFGHIDILVSNVGISN 147 (317)
T ss_dssp HHH-H---HHHH-----HHSCCCEEEECCCCCC
T ss_pred HHH-H---HHHH-----HcCCCCEEEECCCCCC
Confidence 000 0 0000 0147999998775443
No 424
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=93.00 E-value=0.93 Score=40.21 Aligned_cols=129 Identities=12% Similarity=0.128 Sum_probs=74.2
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChh-HHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLS-RLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~-rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
.|.++|=.|+ +|+.+.++++.+ +.+|+.++.+.. ..+.+.+.+...+.++.++..|..+... +.-..+. ...
T Consensus 28 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~~~~~~-~~~ 103 (283)
T 1g0o_A 28 EGKVALVTGA-GRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVED--IVRMFEE-AVK 103 (283)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH--HHHHHHH-HHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHH--HHHHHHH-HHH
Confidence 3567776665 577888877654 369999998865 3566666677777778888899876431 0000000 000
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
.-+..|.++.++-....+.+ +..+.++.... ..-...+++.+.+.++.+|++|+.+.
T Consensus 104 -----~~g~iD~lv~~Ag~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 104 -----IFGKLDIVCSNSGVVSFGHV-------KDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp -----HHSCCCEEEECCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred -----HcCCCCEEEECCCcCCCCCc-------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 01468999987643322211 12233333222 22234466777777777888887643
No 425
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.98 E-value=0.64 Score=40.88 Aligned_cols=61 Identities=13% Similarity=0.145 Sum_probs=46.9
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcC-CceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLN-LKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g-~~v~~~~~D~~~~~ 193 (329)
.|.++|=.|+ +|+.+.++++.+ +.+|+.+|.+...++.+.+.++..+ .++.++.+|.++..
T Consensus 9 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~ 73 (262)
T 3pk0_A 9 QGRSVVVTGG-TKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRA 73 (262)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHH
Confidence 3567776665 567777777654 3699999999999998888888776 45888999998754
No 426
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=92.93 E-value=0.53 Score=41.88 Aligned_cols=127 Identities=12% Similarity=0.063 Sum_probs=75.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.|.++|=.|+ +|+.+.++++.+ +.+|+.+|.++..++.+.+.+...+..+.++..|..+...-.-.+..
T Consensus 32 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~------- 103 (275)
T 4imr_A 32 RGRTALVTGS-SRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIER------- 103 (275)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHH-------
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH-------
Confidence 3667776665 467777777654 36999999999999998888888777788899998875410000000
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHH----HHHHHHHHHHHhcC--CCCCEEEEEc
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLS----KYSCKILNNLWKML--KPGGKLLFVT 275 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~----~~q~~lL~~a~~~L--kpgG~lvysT 275 (329)
....+..|.++.++-....+.+. ..+.++..... .-...+++.+...+ +.+|++|+.+
T Consensus 104 --~~~~g~iD~lvnnAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~is 167 (275)
T 4imr_A 104 --AEAIAPVDILVINASAQINATLS-------ALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIG 167 (275)
T ss_dssp --HHHHSCCCEEEECCCCCCCBCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred --HHHhCCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 00014789999877533222221 22333332221 12233455555544 3468888764
No 427
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=92.92 E-value=0.46 Score=42.30 Aligned_cols=61 Identities=7% Similarity=0.060 Sum_probs=47.0
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.++|=.|++ |+.+.++++.+ +.+|+.++.+...++.+.+.+...+..+.++.+|.++..
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~ 86 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTD 86 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence 36678877755 56777776543 369999999999999988888887777889999998754
No 428
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=92.89 E-value=0.71 Score=40.95 Aligned_cols=61 Identities=10% Similarity=0.116 Sum_probs=46.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.|+ +|+.+.++++.+ +.+|++++.++..++.+.+.++..+..+.++.+|.++..
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~ 84 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence 3567787775 567777777654 369999999999988887878777767888889988754
No 429
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=92.86 E-value=0.77 Score=40.16 Aligned_cols=60 Identities=17% Similarity=0.210 Sum_probs=44.6
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHc-CCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRL-NLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~-g~~v~~~~~D~~~~~ 193 (329)
|.+||=.|+ +|+.+.++++.+ +.+|++++.++..++.+.+.+... +.++.++.+|..+..
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~ 70 (263)
T 3ai3_A 7 GKVAVITGS-SSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70 (263)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHH
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 567776665 567787777654 369999999998888777766654 666788889988753
No 430
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=92.84 E-value=0.75 Score=39.56 Aligned_cols=60 Identities=12% Similarity=0.123 Sum_probs=44.4
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEE-eCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISV-DNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~av-D~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
|.+||=.|+ +|+.+.++++.+ +.+|+++ +.++..++.+.+.+...+.++.++.+|..+..
T Consensus 5 ~~~vlItGa-sggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 68 (247)
T 2hq1_A 5 GKTAIVTGS-SRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPE 68 (247)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHH
T ss_pred CcEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence 557776654 577888877654 3689988 67777888777777777767888899988753
No 431
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=92.84 E-value=0.63 Score=40.88 Aligned_cols=61 Identities=10% Similarity=0.078 Sum_probs=46.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEE-eCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISV-DNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~av-D~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.|+ +|+.+.++++.+ +.+|+.+ +.+...++.+.+.++..+..+.++.+|.++..
T Consensus 3 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 67 (258)
T 3oid_A 3 QNKCALVTGS-SRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPA 67 (258)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEecC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH
Confidence 3566776665 567787777654 3577776 88999999888888887877889999998754
No 432
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=92.83 E-value=0.58 Score=41.04 Aligned_cols=61 Identities=13% Similarity=0.113 Sum_probs=46.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.++|=.|+ +|+.+.++++.+ +.+|+.++.++..++.+.+.+...+..+.++.+|..+..
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 69 (262)
T 1zem_A 6 NGKVCLVTGA-GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEE 69 (262)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 3567776665 567787777654 369999999999988888887776767888889988753
No 433
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=92.82 E-value=0.8 Score=39.69 Aligned_cols=60 Identities=17% Similarity=0.184 Sum_probs=45.2
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-ChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-NLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
|.+||=.| |+|+.+.++++.+ +.+|+.++. ++..++.+.+.++..+.++.++.+|..+..
T Consensus 4 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 67 (246)
T 2uvd_A 4 GKVALVTG-ASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAE 67 (246)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH
Confidence 55677555 5577888877654 369999999 888888887777777766788889988754
No 434
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=92.82 E-value=0.75 Score=40.17 Aligned_cols=60 Identities=17% Similarity=0.066 Sum_probs=45.9
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
+.+||=.| |+|+.+.++++.+ +.+|++++.++..++.+.+.++..+..+.++..|..+..
T Consensus 14 ~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 76 (266)
T 1xq1_A 14 AKTVLVTG-GTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRP 76 (266)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHH
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHH
Confidence 55777665 4677888887654 369999999999888887777777767888889987753
No 435
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=92.78 E-value=0.12 Score=47.80 Aligned_cols=52 Identities=10% Similarity=0.165 Sum_probs=37.0
Q ss_pred hcCCCCC--CeEEeecC--CCchHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 127 LLDIRSG--MYVLDACS--APGGKTCHLLEIADI-KLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 127 ~l~~~~g--~~VLDlca--g~G~kt~~la~~~~~-~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
..++++| ++||-.|| |-|..+.+++...+. +|+++|.++++++.+++. +|..
T Consensus 153 ~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~ 209 (357)
T 2zb4_A 153 KGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD 209 (357)
T ss_dssp HSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS
T ss_pred hcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc
Confidence 3468889 99999987 334455556666676 999999999887766532 5654
No 436
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=92.75 E-value=0.65 Score=41.44 Aligned_cols=61 Identities=8% Similarity=0.040 Sum_probs=47.3
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.+..+|=.|++ |+.+.++++.+ +.+|+.+|.+...++.+.+.+...+..+.++.+|..+..
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~ 90 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDEL 90 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH
Confidence 36677877755 56777777653 369999999999999888888777777888999988754
No 437
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.72 E-value=0.82 Score=40.53 Aligned_cols=61 Identities=20% Similarity=0.214 Sum_probs=49.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
+|..+|=-|++.| ++..+|+.+ +++|+.+|+++++++.+.+.++..|.++..+.+|.++..
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~ 69 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKK 69 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHH
Confidence 3677787776654 666666543 479999999999999999999999988889999998754
No 438
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.69 E-value=0.47 Score=43.21 Aligned_cols=61 Identities=13% Similarity=0.092 Sum_probs=47.9
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCC--ceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNL--KATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~--~v~~~~~D~~~~~ 193 (329)
.|.+||=.|++ |+++.++++.+ +.+|++++.+...++.+.+.+...+. .+.++..|.++..
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~ 72 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASRE 72 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHH
Confidence 36678877765 66788777654 36999999999999999888887776 4788999988754
No 439
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=92.63 E-value=0.9 Score=40.20 Aligned_cols=61 Identities=11% Similarity=0.020 Sum_probs=46.0
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCC------------hhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNN------------LSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~------------~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.++|=.|++ |+.+.++++.+ +.+|+.+|.+ ...++.+.+.++..+..+.++..|.++..
T Consensus 9 ~~k~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 84 (281)
T 3s55_A 9 EGKTALITGGA-RGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA 84 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence 36678877765 66777777654 3699999987 66777777777777777888999988754
No 440
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.60 E-value=0.13 Score=46.96 Aligned_cols=49 Identities=14% Similarity=0.230 Sum_probs=36.7
Q ss_pred CCCCCC-eEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIRSGM-YVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g~-~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
++++|+ +||-.|| |-|..+.++|+..+.+|++++.++++++.+++ +|..
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~ 197 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGAS 197 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTCS
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCc
Confidence 577886 8999886 34556667777667789999999998877653 5654
No 441
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=92.58 E-value=0.89 Score=40.19 Aligned_cols=128 Identities=9% Similarity=0.037 Sum_probs=73.5
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-ChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-NLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
.|..||=.|++ |+.+.++++.+ +.+|+.++. +...++.+.+.++..+..+.++.+|..+... +.--.+ ....
T Consensus 27 ~~k~vlVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~--v~~~~~-~~~~ 102 (269)
T 4dmm_A 27 TDRIALVTGAS-RGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESE--VEALFA-AVIE 102 (269)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHH--HHHHHH-HHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHH--HHHHHH-HHHH
Confidence 36677766654 66777777653 368988888 7888888888888887778889999987541 100000 0000
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHH----HHHHHHHHHHHhcC--CCCCEEEEEc
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLS----KYSCKILNNLWKML--KPGGKLLFVT 275 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~----~~q~~lL~~a~~~L--kpgG~lvysT 275 (329)
..+..|.++.++-.+..+.+. ..+.++..... .-...+++.+.+.+ +.+|++|+.+
T Consensus 103 -----~~g~id~lv~nAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~is 164 (269)
T 4dmm_A 103 -----RWGRLDVLVNNAGITRDTLLL-------RMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIA 164 (269)
T ss_dssp -----HHSCCCEEEECCCCCCCCCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred -----HcCCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence 014789999887544332221 12233332221 11233445554444 3468888764
No 442
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=92.58 E-value=0.6 Score=41.53 Aligned_cols=60 Identities=12% Similarity=0.180 Sum_probs=46.1
Q ss_pred CCeEEeecCCCchHHHHHHHhCC---CEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIAD---IKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~~---~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
+.+||=.|+ +|+.+.++++.+. .+|++++.++..++.+.+.++..+..+.++.+|..+..
T Consensus 44 ~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~ 106 (285)
T 2c07_A 44 NKVALVTGA-GRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKE 106 (285)
T ss_dssp SCEEEEEST-TSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHH
Confidence 567776765 5788888877543 68999999998888887777776767888899988754
No 443
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.54 E-value=0.17 Score=47.06 Aligned_cols=43 Identities=12% Similarity=0.065 Sum_probs=31.1
Q ss_pred CCeEEeecCCCchHHH---HHHHhCCCEEEEEeCCh---hHHHHHHHHHHHcCCc
Q psy15212 133 GMYVLDACSAPGGKTC---HLLEIADIKLISVDNNL---SRLNMISENLKRLNLK 181 (329)
Q Consensus 133 g~~VLDlcag~G~kt~---~la~~~~~~v~avD~~~---~rl~~l~~n~~~~g~~ 181 (329)
|++||-.|+ |+.+. ++|+..+.+|+++|.++ ++++.++ ++|..
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~----~~ga~ 229 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE----ETKTN 229 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHH----HHTCE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHH----HhCCc
Confidence 999999997 55544 45555557999999998 7776554 35654
No 444
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=92.54 E-value=1 Score=40.05 Aligned_cols=61 Identities=11% Similarity=0.134 Sum_probs=45.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHc-CCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRL-NLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~-g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.|+ +|+.+.++++.+ +.+|++++.++..++.+.+.+... +..+.++.+|..+..
T Consensus 25 ~~k~vlITGa-sggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~ 89 (302)
T 1w6u_A 25 QGKVAFITGG-GTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPD 89 (302)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHH
Confidence 3567776665 577888877654 369999999998888777766654 656888999988753
No 445
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.52 E-value=0.33 Score=44.71 Aligned_cols=50 Identities=14% Similarity=0.168 Sum_probs=37.4
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCce
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKA 182 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v 182 (329)
..+++|++||-.|| |.|..++++|+..+.+|+++ .++++++.++ ++|...
T Consensus 146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~----~lGa~~ 197 (343)
T 3gaz_A 146 AQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVR----DLGATP 197 (343)
T ss_dssp TCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHH----HHTSEE
T ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHH----HcCCCE
Confidence 45789999999984 34667777787777899999 8888877654 457653
No 446
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=92.34 E-value=0.81 Score=40.60 Aligned_cols=128 Identities=16% Similarity=0.101 Sum_probs=77.0
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.|..+|=-|++ +|++..+|+.+ |++|+.+|++++.++.+.+.+...|.++..+.+|.++... +.--.+ ...
T Consensus 8 ~gKvalVTGas-~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~--v~~~~~-~~~-- 81 (255)
T 4g81_D 8 TGKTALVTGSA-RGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELA--IEAAFS-KLD-- 81 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHH--HHHHHH-HHH--
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHH--HHHHHH-HHH--
Confidence 36677777765 45777766654 3799999999999999999999988888888999887541 100000 000
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHH----HHHHHHHHHHhcC---CCCCEEEEEc
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSK----YSCKILNNLWKML---KPGGKLLFVT 275 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~----~q~~lL~~a~~~L---kpgG~lvysT 275 (329)
-.-++.|.++.++--...+.+ +..+.++...... -...+.+.+.+.+ +.+|.+|..+
T Consensus 82 ---~~~G~iDiLVNNAG~~~~~~~-------~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnis 145 (255)
T 4g81_D 82 ---AEGIHVDILINNAGIQYRKPM-------VELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIG 145 (255)
T ss_dssp ---HTTCCCCEEEECCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred ---HHCCCCcEEEECCCCCCCCCh-------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEe
Confidence 012578999987743322222 2223333333221 1223445555555 2568888764
No 447
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=92.33 E-value=1.4 Score=38.56 Aligned_cols=126 Identities=6% Similarity=0.000 Sum_probs=72.6
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHH-cCCc-eEEEecCccccch-hhhhhhhccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKR-LNLK-ATLILSDISKINL-KKLYIDINKKTN 206 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~-~g~~-v~~~~~D~~~~~~-~~~~~~~~~~~~ 206 (329)
|..+|=.|++ |+.+.++++.+ +.+|+.+|.+...++.+.+.+.. .+-. +.++..|.++... ..+. . ...
T Consensus 8 ~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~-~---~~~ 82 (265)
T 3lf2_A 8 EAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFA-E---ACE 82 (265)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHH-H---HHH
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHH-H---HHH
Confidence 5677777655 56777776653 36999999999999988888776 4443 7888899887541 0000 0 000
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCC--CCEEEEEc
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKP--GGKLLFVT 275 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~Lkp--gG~lvysT 275 (329)
. ..+..|.++.++-.+..+.+. ..+.++.... ..-...+.+.+...++. +|++|+.+
T Consensus 83 ~-----~~g~id~lvnnAg~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~is 145 (265)
T 3lf2_A 83 R-----TLGCASILVNNAGQGRVSTFA-------ETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVN 145 (265)
T ss_dssp H-----HHCSCSEEEECCCCCCCBCTT-------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEE
T ss_pred H-----HcCCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEEC
Confidence 0 014689999877543222221 1223332222 22233455666665543 57777654
No 448
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=92.29 E-value=1.5 Score=38.58 Aligned_cols=59 Identities=8% Similarity=-0.055 Sum_probs=44.5
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-ChhHHHHHHHHHHHc-CCceEEEecCcccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-NLSRLNMISENLKRL-NLKATLILSDISKI 192 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-~~~rl~~l~~n~~~~-g~~v~~~~~D~~~~ 192 (329)
|.++|=.| |+|+.+.++++.+ +.+|+.++. ++..++.+.+.+... +..+.++.+|..+.
T Consensus 11 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 74 (276)
T 1mxh_A 11 CPAAVITG-GARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS 74 (276)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCc
Confidence 55677555 5577888887654 369999999 988888877777655 65678888998876
No 449
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=92.28 E-value=0.79 Score=39.37 Aligned_cols=60 Identities=17% Similarity=0.137 Sum_probs=44.8
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHH-cCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKR-LNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~-~g~~v~~~~~D~~~~~ 193 (329)
|.+||=.|+ +|+.+.++++.+ +.+|++++.++..++.+.+.+.. .+..+.++.+|..+..
T Consensus 7 ~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 70 (248)
T 2pnf_A 7 GKVSLVTGS-TRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEE 70 (248)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHH
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHH
Confidence 556776654 678888887654 36999999999988877776655 4666788889988753
No 450
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=92.27 E-value=0.81 Score=40.45 Aligned_cols=61 Identities=15% Similarity=0.116 Sum_probs=45.7
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-------------ChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-------------NLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-------------~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.++|=.|++ |+++.++++.+ +.+|+.+|. +...++.+.+.+...+..+.++..|..+..
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD 86 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 36677777755 56777776543 369999998 677888877778777777888999988754
No 451
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=92.21 E-value=1.1 Score=39.83 Aligned_cols=124 Identities=10% Similarity=0.094 Sum_probs=69.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhcccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKTNN 207 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~~~ 207 (329)
.|.+||=.|++ |+.+.++++.+ +.+|+.+|.+...++.+.+.+ +..+.++.+|.++... ..+ ++ ....
T Consensus 28 ~gk~vlVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~-~~---~~~~ 99 (277)
T 3gvc_A 28 AGKVAIVTGAG-AGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAM-VD---ACVA 99 (277)
T ss_dssp TTCEEEETTTT-STHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHH-HH---HHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHH-HH---HHHH
Confidence 36677766655 56777766543 369999999998877665544 5567888999887541 000 00 0000
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcC--CCCCEEEEEc
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKML--KPGGKLLFVT 275 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~L--kpgG~lvysT 275 (329)
..+..|.++.++--...+.+. ..+.++.... ..-...+++.+...+ +.+|++|+.+
T Consensus 100 -----~~g~iD~lvnnAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~is 161 (277)
T 3gvc_A 100 -----AFGGVDKLVANAGVVHLASLI-------DTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLS 161 (277)
T ss_dssp -----HHSSCCEEEECCCCCCCBCTT-------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred -----HcCCCCEEEECCCCCCCCChh-------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 014689999876433222211 1233333222 122233455555544 4578888764
No 452
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=92.19 E-value=0.61 Score=40.94 Aligned_cols=128 Identities=6% Similarity=-0.013 Sum_probs=75.9
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEE-eCChhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISV-DNNLSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~av-D~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~~ 206 (329)
.|.++|=.|++ |+.+.++++.+ +.+|+.+ +.+....+.+.+.++..+..+.++.+|.++... ..+. . ...
T Consensus 7 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~-~---~~~ 81 (259)
T 3edm_A 7 TNRTIVVAGAG-RDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAI-S---AAA 81 (259)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHH-H---HHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH-H---HHH
Confidence 36677777655 56777776643 3688877 778888888888888777778889999987541 0000 0 000
Q ss_pred ccccccCCCCCCEEEEccCCc-cccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 207 NRFRFYKNKYFDRILADLPCT-GSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCs-g~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
. .-+..|.++.++--. ..+.+ ...+.++.... ..-...+++.+...++++|++|+.+.
T Consensus 82 ~-----~~g~id~lv~nAg~~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 144 (259)
T 3edm_A 82 D-----KFGEIHGLVHVAGGLIARKTI-------AEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS 144 (259)
T ss_dssp H-----HHCSEEEEEECCCCCCCCCCT-------TTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred H-----HhCCCCEEEECCCccCCCCCh-------hhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 0 014689998876311 11111 11223332222 22334577788888888888887654
No 453
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=92.13 E-value=0.95 Score=40.56 Aligned_cols=61 Identities=13% Similarity=0.082 Sum_probs=46.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.|+ +|+.+.++++.+ +.+|++++.++..++.+.+.++..+..+.++.+|..+..
T Consensus 33 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~ 96 (291)
T 3cxt_A 33 KGKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDED 96 (291)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHH
Confidence 3667777765 577787777654 369999999999988888877777766788889988754
No 454
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=92.13 E-value=0.99 Score=40.26 Aligned_cols=60 Identities=13% Similarity=0.192 Sum_probs=45.8
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHH-----cCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKR-----LNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~-----~g~~v~~~~~D~~~~~ 193 (329)
|.+||=.|+ +|+.+.++++.+ +.+|++++.+...++.+.+.+.. .+..+.++.+|..+..
T Consensus 18 ~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~ 85 (303)
T 1yxm_A 18 GQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEE 85 (303)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHH
Confidence 567887775 578888887654 36999999999988888777765 3555888899988753
No 455
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=92.11 E-value=0.77 Score=40.59 Aligned_cols=129 Identities=10% Similarity=0.119 Sum_probs=76.5
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEE-eCChhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISV-DNNLSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~av-D~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~~ 206 (329)
.|..+|=.|++ |+.+.++++.+ +.+|+.+ ..+...++.+.+.++..+..+.++..|.++... ..+. + ...
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~-~---~~~ 100 (267)
T 3u5t_A 26 TNKVAIVTGAS-RGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLF-A---TAE 100 (267)
T ss_dssp -CCEEEEESCS-SHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH-H---HHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH-H---HHH
Confidence 36677777655 56777776554 3577776 567778888888888888778888999987541 0000 0 000
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHH----HHHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKK----LSKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~----l~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
. ..+..|.++.++--...+.+.. .+.++... ...-...+++.+.+.++.+|++|+.+.+
T Consensus 101 ~-----~~g~iD~lvnnAG~~~~~~~~~-------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~ 163 (267)
T 3u5t_A 101 E-----AFGGVDVLVNNAGIMPLTTIAE-------TGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS 163 (267)
T ss_dssp H-----HHSCEEEEEECCCCCCCCCGGG-------CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred H-----HcCCCCEEEECCCCCCCCChhh-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence 0 0147899998774332222221 22232221 2223345677778888888998887543
No 456
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=92.11 E-value=0.77 Score=40.18 Aligned_cols=84 Identities=14% Similarity=0.121 Sum_probs=52.6
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
.|.+||=.|+ +|+.+.++++.+ +.+|+.+|.+...++.+.+.+ +-.+.++.+|.++... +.-..+. .-
T Consensus 7 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~--v~~~~~~-~~-- 77 (259)
T 4e6p_A 7 EGKSALITGS-ARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDS--IDAAIAA-TV-- 77 (259)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHH--HHHHHHH-HH--
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHH--HHHHHHH-HH--
Confidence 4667787764 577787777654 369999999988877665544 4457888899887541 0000000 00
Q ss_pred ccccCCCCCCEEEEccCCc
Q psy15212 209 FRFYKNKYFDRILADLPCT 227 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCs 227 (329)
. ..+..|.++.++-..
T Consensus 78 -~--~~g~id~lv~~Ag~~ 93 (259)
T 4e6p_A 78 -E--HAGGLDILVNNAALF 93 (259)
T ss_dssp -H--HSSSCCEEEECCCCC
T ss_pred -H--HcCCCCEEEECCCcC
Confidence 0 124799999887544
No 457
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=92.06 E-value=0.86 Score=40.52 Aligned_cols=61 Identities=7% Similarity=0.112 Sum_probs=46.7
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-ChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-NLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|..+|=.|++ |+.+.++++.+ +.+|+.+|. ++..++.+.+.+...+..+.++.+|.++..
T Consensus 28 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 92 (280)
T 4da9_A 28 ARPVAIVTGGR-RGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLS 92 (280)
T ss_dssp CCCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGG
T ss_pred CCCEEEEecCC-CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 46677777654 56777776653 369999995 888888888888888877889999998754
No 458
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=92.02 E-value=1.4 Score=39.50 Aligned_cols=61 Identities=13% Similarity=0.127 Sum_probs=46.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCC------------hhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNN------------LSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~------------~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|..+|=.|++ ||++.++++.+ +.+|+.+|.+ ...++.+.+.++..+..+.++..|.++..
T Consensus 27 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 102 (299)
T 3t7c_A 27 EGKVAFITGAA-RGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFD 102 (299)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence 46678877765 56777776543 3699999987 77788777778887877889999998754
No 459
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=92.01 E-value=1 Score=40.02 Aligned_cols=60 Identities=12% Similarity=0.086 Sum_probs=45.8
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCC-ceEEEecCcccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNL-KATLILSDISKI 192 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~-~v~~~~~D~~~~ 192 (329)
.+.+||=.|+ +||++.++++.+ +.+|+.++.+..+++.+.+.+...+- .+.++..|..+.
T Consensus 11 ~~k~vlITGa-s~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 74 (311)
T 3o26_A 11 KRRCAVVTGG-NKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP 74 (311)
T ss_dssp -CCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSC
T ss_pred CCcEEEEecC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCc
Confidence 3567776665 477888877654 36999999999999888888877654 488899999875
No 460
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=91.99 E-value=0.88 Score=42.27 Aligned_cols=47 Identities=15% Similarity=0.175 Sum_probs=34.7
Q ss_pred CCCCCeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 130 IRSGMYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 130 ~~~g~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
+++|++||=.|+ |-|..+.++|+..+.+|++++ ++.+++.+ +++|..
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~----~~lGa~ 229 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV----RKLGAD 229 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH----HHTTCS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH----HHcCCC
Confidence 788999999874 345566777777778999998 77776654 456765
No 461
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=91.92 E-value=0.51 Score=41.29 Aligned_cols=133 Identities=9% Similarity=0.032 Sum_probs=77.9
Q ss_pred CCCCeEEeecCC-CchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhcccc
Q psy15212 131 RSGMYVLDACSA-PGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKT 205 (329)
Q Consensus 131 ~~g~~VLDlcag-~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~ 205 (329)
.++.+||=.|++ +|+.+.++++.+ +.+|+.++.+....+.+++..+..+ .+.++.+|.++... ..+.-...
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~--- 87 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-SELVFPCDVADDAQIDALFASLK--- 87 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHH---
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC-CcEEEECCCCCHHHHHHHHHHHH---
Confidence 457789988884 478888887654 3699999998776776666666654 36788899887541 00000000
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCccc-CChhHHHHHH----HHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWL-RRKNDIKKLS----KYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~-~~~~~~~~l~----~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
. ..+..|.++.++--...+.+. ...+. .+.++..... .-...+++.+...++++|++|+.+.
T Consensus 88 ----~--~~g~id~lv~nAg~~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 88 ----T--HWDSLDGLVHSIGFAPREAIA---GDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp ----H--HCSCEEEEEECCCCCCGGGGS---SCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred ----H--HcCCCCEEEECCccCcccccc---CccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 0 114789999877433221100 00111 2333333322 2234567778888888888887643
No 462
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=91.89 E-value=0.9 Score=40.31 Aligned_cols=61 Identities=16% Similarity=0.115 Sum_probs=45.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCC----------------hhHHHHHHHHHHHcCCceEEEecCcccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNN----------------LSRLNMISENLKRLNLKATLILSDISKI 192 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~----------------~~rl~~l~~n~~~~g~~v~~~~~D~~~~ 192 (329)
.|..+|=.|++ |+.+.++++.+ +.+|+.+|.+ .+.++.+.+.+...+..+.++..|.++.
T Consensus 10 ~~k~~lVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 10 EGKVAFVTGAA-RGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 36677777765 55777776653 3699999987 6777777777777777788899999875
Q ss_pred c
Q psy15212 193 N 193 (329)
Q Consensus 193 ~ 193 (329)
.
T Consensus 89 ~ 89 (286)
T 3uve_A 89 D 89 (286)
T ss_dssp H
T ss_pred H
Confidence 4
No 463
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=91.86 E-value=0.99 Score=39.68 Aligned_cols=83 Identities=11% Similarity=0.066 Sum_probs=55.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcC--CceEEEecCccccchhhhhhhhccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLN--LKATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g--~~v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.|.++|=.|+ +|+.+.++++.+ +.+|+.+|.+...++.+.+.+...+ ..+..+..|..+... +.
T Consensus 9 ~~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~--~~-------- 77 (267)
T 3t4x_A 9 KGKTALVTGS-TAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQG--CQ-------- 77 (267)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHH--HH--------
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHH--HH--------
Confidence 3567776665 467777777654 3699999999999988888777664 336788889876431 00
Q ss_pred ccccccCCCCCCEEEEccCCc
Q psy15212 207 NRFRFYKNKYFDRILADLPCT 227 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCs 227 (329)
.-+. .-+..|.++.++--.
T Consensus 78 ~~~~--~~g~id~lv~nAg~~ 96 (267)
T 3t4x_A 78 DVIE--KYPKVDILINNLGIF 96 (267)
T ss_dssp HHHH--HCCCCSEEEECCCCC
T ss_pred HHHH--hcCCCCEEEECCCCC
Confidence 0000 124789999877543
No 464
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=91.78 E-value=1.2 Score=39.62 Aligned_cols=125 Identities=14% Similarity=0.092 Sum_probs=69.8
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNRF 209 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 209 (329)
|.+||=.|++ |+.+.++++.+ +.+|+.+|.++..++.+.+. .+..+..+..|.++... +.--.+ ....
T Consensus 27 ~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~--v~~~~~-~~~~-- 97 (277)
T 4dqx_A 27 QRVCIVTGGG-SGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGSKAFGVRVDVSSAKD--AESMVE-KTTA-- 97 (277)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---HCTTEEEEECCTTCHHH--HHHHHH-HHHH--
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCCceEEEEecCCCHHH--HHHHHH-HHHH--
Confidence 5677777654 66777777654 36999999998877665544 45567888899887541 000000 0000
Q ss_pred cccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCC--CCEEEEEcC
Q psy15212 210 RFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKP--GGKLLFVTC 276 (329)
Q Consensus 210 ~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~Lkp--gG~lvysTC 276 (329)
..+..|.++.++-....+.+. ..+.++.... ..-...+++.+...++. +|++|+.+.
T Consensus 98 ---~~g~iD~lv~nAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS 160 (277)
T 4dqx_A 98 ---KWGRVDVLVNNAGFGTTGNVV-------TIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTS 160 (277)
T ss_dssp ---HHSCCCEEEECCCCCCCBCTT-------TSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECC
T ss_pred ---HcCCCCEEEECCCcCCCCCcc-------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECc
Confidence 014789999877543322221 1223333222 12223455566665544 578887653
No 465
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.76 E-value=0.75 Score=41.72 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=35.2
Q ss_pred hcCCCCCCeEEeec-CC-CchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 127 LLDIRSGMYVLDAC-SA-PGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 127 ~l~~~~g~~VLDlc-ag-~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
...+++|++||=.| +| -|..+.++|+..+.+|++++ ++.+++. ++++|..
T Consensus 147 ~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~----~~~lGa~ 198 (321)
T 3tqh_A 147 QAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAF----LKALGAE 198 (321)
T ss_dssp HTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHH----HHHHTCS
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHH----HHHcCCC
Confidence 34689999999875 33 46667777877788999987 5555444 4457765
No 466
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=91.75 E-value=1.4 Score=38.50 Aligned_cols=60 Identities=17% Similarity=0.047 Sum_probs=45.2
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHc--CCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRL--NLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~--g~~v~~~~~D~~~~~ 193 (329)
|.++|=.|+ +|+.+.++++.+ +.+|+.++.++..++.+.+.+... +..+.++.+|..+..
T Consensus 13 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 77 (267)
T 1iy8_A 13 DRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEA 77 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHH
Confidence 567777775 577777777654 369999999999888877777655 556788889988754
No 467
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=91.73 E-value=0.64 Score=42.24 Aligned_cols=61 Identities=13% Similarity=0.077 Sum_probs=46.5
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCC----------hhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNN----------LSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~----------~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.|++ |+.+.++++.+ +.+|+.+|.+ ...++.+.+.+...+..+.++.+|..+..
T Consensus 26 ~gk~vlVTGas-~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 99 (322)
T 3qlj_A 26 DGRVVIVTGAG-GGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWD 99 (322)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence 46677766654 67777777654 3699999987 77888888888887777888899988754
No 468
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=91.71 E-value=1.1 Score=39.04 Aligned_cols=128 Identities=16% Similarity=0.205 Sum_probs=72.7
Q ss_pred CCCeEEeecCC-CchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCC-ceEEEecCccccchhhhhhhhccccc
Q psy15212 132 SGMYVLDACSA-PGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNL-KATLILSDISKINLKKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag-~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~-~v~~~~~D~~~~~~~~~~~~~~~~~~ 206 (329)
.|.+||=.|++ . |.+.++++.+ +.+|+.+|.+...++.+.+.++..+- .+.++.+|.++... +.--.+. ..
T Consensus 21 ~~k~vlITGasg~-GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~--v~~~~~~-~~ 96 (266)
T 3o38_A 21 KGKVVLVTAAAGT-GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEA--VDALITQ-TV 96 (266)
T ss_dssp TTCEEEESSCSSS-SHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHH--HHHHHHH-HH
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHH--HHHHHHH-HH
Confidence 36678877763 3 4566665543 46999999999999988888876653 48899999987541 1000000 00
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHH----HHHHHHHHHHHhcCC---CCCEEEEEc
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLS----KYSCKILNNLWKMLK---PGGKLLFVT 275 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~----~~q~~lL~~a~~~Lk---pgG~lvysT 275 (329)
. ..+..|.++.++-....+.+. ..+.++..... .-...+++.+...++ .+|++|+.+
T Consensus 97 ---~--~~g~id~li~~Ag~~~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~s 160 (266)
T 3o38_A 97 ---E--KAGRLDVLVNNAGLGGQTPVV-------DMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNA 160 (266)
T ss_dssp ---H--HHSCCCEEEECCCCCCCCCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEEC
T ss_pred ---H--HhCCCcEEEECCCcCCCCCcc-------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 0 014789999877543332221 12333332221 122345555555543 567777754
No 469
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.64 E-value=0.67 Score=41.59 Aligned_cols=124 Identities=10% Similarity=0.063 Sum_probs=74.2
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhcccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKTNN 207 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~~~ 207 (329)
.|..+|=-|++. |++..+|+.+ |++|+.+|.+.+.++.+.+ ..|-++..+.+|.++... ..+. + ..-.
T Consensus 28 ~gKvalVTGas~-GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~---~~g~~~~~~~~Dv~~~~~v~~~~-~---~~~~ 99 (273)
T 4fgs_A 28 NAKIAVITGATS-GIGLAAAKRFVAEGARVFITGRRKDVLDAAIA---EIGGGAVGIQADSANLAELDRLY-E---KVKA 99 (273)
T ss_dssp TTCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHCTTCEEEECCTTCHHHHHHHH-H---HHHH
T ss_pred CCCEEEEeCcCC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCCCeEEEEecCCCHHHHHHHH-H---HHHH
Confidence 477778777665 5676666554 3799999999988776544 446667788899887541 0000 0 0001
Q ss_pred cccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHH----HHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 208 RFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLS----KYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~----~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
+ -++.|.++.++--...+.+. ..+.++..... .-...+.+.+.+.++.+|.+|..+
T Consensus 100 ~-----~G~iDiLVNNAG~~~~~~~~-------~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 100 E-----AGRIDVLFVNAGGGSMLPLG-------EVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp H-----HSCEEEEEECCCCCCCCCTT-------SCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred H-----cCCCCEEEECCCCCCCCChh-------hccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 1 15789988877433222221 22333333222 223456778888999988887764
No 470
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=91.63 E-value=1.3 Score=38.63 Aligned_cols=60 Identities=10% Similarity=0.037 Sum_probs=43.7
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhH--HHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSR--LNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~r--l~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
|.++|=.|+ +|+.+.++++.+ +.+|+.++.++.. ++.+.+.++..+..+.++..|..+..
T Consensus 2 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 66 (258)
T 3a28_C 2 SKVAMVTGG-AQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKA 66 (258)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHH
Confidence 446666665 567777777654 3699999999887 77777777666666888889988754
No 471
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=91.55 E-value=0.49 Score=42.25 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=46.7
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.|++ |+.+.++++.+ +.+|+.+|.+...++.+.+.+...+..+.++.+|.++..
T Consensus 7 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 70 (280)
T 3tox_A 7 EGKIAIVTGAS-SGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEA 70 (280)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence 36677766654 66777776643 369999999999999888888776767888889988754
No 472
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=91.48 E-value=1.3 Score=38.63 Aligned_cols=60 Identities=13% Similarity=0.148 Sum_probs=45.7
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
|.++|=.| |+|+.+.++++.+ +.+|+.++.++..++.+.+.+...+.++.++.+|..+..
T Consensus 5 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 67 (260)
T 2qq5_A 5 GQVCVVTG-ASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQES 67 (260)
T ss_dssp TCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHH
Confidence 55677666 5567888877654 369999999999988888777776766788889988754
No 473
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=91.38 E-value=1.6 Score=38.83 Aligned_cols=59 Identities=15% Similarity=0.048 Sum_probs=44.6
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEe-CChhHHHHHHHHHH-HcCCceEEEecCcccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVD-NNLSRLNMISENLK-RLNLKATLILSDISKI 192 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD-~~~~rl~~l~~n~~-~~g~~v~~~~~D~~~~ 192 (329)
|.++|=.|+ +|+.+.++++.+ +.+|+.++ .++..++.+.+.+. ..+..+.++..|..+.
T Consensus 9 ~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 9 VPVALVTGA-AKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV 72 (291)
T ss_dssp CCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCc
Confidence 556776665 467888777654 36999999 99998888877776 5566688888998764
No 474
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=91.38 E-value=1.4 Score=37.78 Aligned_cols=59 Identities=15% Similarity=0.085 Sum_probs=43.1
Q ss_pred CeEEeecCCCchHHHHHHHhC---CCEEEE-EeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 134 MYVLDACSAPGGKTCHLLEIA---DIKLIS-VDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 134 ~~VLDlcag~G~kt~~la~~~---~~~v~a-vD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.+||=. -|+|+.+.++++.+ +.+|++ .+.++..++.+.+.++..+..+.++.+|.++..
T Consensus 2 k~vlVT-GasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 64 (244)
T 1edo_A 2 PVVVVT-GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEA 64 (244)
T ss_dssp CEEEET-TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred CEEEEe-CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHH
Confidence 345544 45688888887754 368888 488888888887777776766788889988754
No 475
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=91.36 E-value=0.39 Score=44.77 Aligned_cols=46 Identities=15% Similarity=0.177 Sum_probs=36.6
Q ss_pred CCCCeEEeecCC--CchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 131 RSGMYVLDACSA--PGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 131 ~~g~~VLDlcag--~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
++|++||=.|++ .|..++++|+..+.+|+++. ++++++.+ +++|..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~----~~lGa~ 210 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLA----KSRGAE 210 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH----HHTTCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHH----HHcCCc
Confidence 789999999883 67888888888888999885 88887755 457764
No 476
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=91.28 E-value=0.76 Score=42.42 Aligned_cols=53 Identities=19% Similarity=0.284 Sum_probs=33.8
Q ss_pred cCCCCCCeEEeecC--CCchHHHHHHHhCCCEEE-EEeCChhHHHHHHHHHHHcCCc
Q psy15212 128 LDIRSGMYVLDACS--APGGKTCHLLEIADIKLI-SVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 128 l~~~~g~~VLDlca--g~G~kt~~la~~~~~~v~-avD~~~~rl~~l~~n~~~~g~~ 181 (329)
.++++|++||=.|| +.|..++++|+..+++++ .++.++.+-+ ..+.++++|..
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~-~~~~~~~lGa~ 218 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK-LSDRLKSLGAE 218 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHH-HHHHHHHTTCS
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHH-HHHHHHhcCCc
Confidence 36789999999986 456677788877776554 4455443221 22334567865
No 477
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=91.26 E-value=1 Score=39.81 Aligned_cols=60 Identities=10% Similarity=0.115 Sum_probs=45.2
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCC---ceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNL---KATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~---~v~~~~~D~~~~~ 193 (329)
|.++|=.|+ +|+.+.++++.+ +.+|++++.++..++.+.+.+...+. .+.++.+|..+..
T Consensus 6 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 71 (280)
T 1xkq_A 6 NKTVIITGS-SNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTED 71 (280)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHH
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHH
Confidence 556776664 567777777653 36999999999998888877776665 5788889988754
No 478
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=91.03 E-value=0.56 Score=43.33 Aligned_cols=53 Identities=19% Similarity=0.297 Sum_probs=36.8
Q ss_pred CCCCC-CeEEeecC--CCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCc
Q psy15212 129 DIRSG-MYVLDACS--APGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLK 181 (329)
Q Consensus 129 ~~~~g-~~VLDlca--g~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~ 181 (329)
++++| ++||=.|| +.|..++++|+..+.+++++..+...+...++.++++|..
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~ 218 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT 218 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe
Confidence 57889 99998876 3455677777777788888876665543334445667865
No 479
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=90.96 E-value=0.56 Score=41.40 Aligned_cols=60 Identities=10% Similarity=0.077 Sum_probs=42.5
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHH---cCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKR---LNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~---~g~~v~~~~~D~~~~~ 193 (329)
|.+||=.|+ +|+.+.++++.+ +.+|++++.++.+++.+.+.+.. .+..+.++.+|..+..
T Consensus 6 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 71 (278)
T 1spx_A 6 EKVAIITGS-SNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDA 71 (278)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHH
Confidence 556776665 577887777653 36999999999988877776632 2334778889988753
No 480
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=90.95 E-value=1.6 Score=37.72 Aligned_cols=128 Identities=9% Similarity=0.080 Sum_probs=72.3
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-ChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhccccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-NLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNNR 208 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 208 (329)
+.++|=.| |+|+.+.++++.+ +.+|+.++. +..+++.+.+.++..+.++.++.+|.++... +.--.+ ..-.
T Consensus 4 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~--v~~~~~-~~~~- 78 (246)
T 3osu_A 4 TKSALVTG-ASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADE--VKAMIK-EVVS- 78 (246)
T ss_dssp SCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH--HHHHHH-HHHH-
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH--HHHHHH-HHHH-
Confidence 45566555 4567888777654 368888877 6688888888888888778889999887541 000000 0000
Q ss_pred ccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcC--CCCCEEEEEcC
Q psy15212 209 FRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKML--KPGGKLLFVTC 276 (329)
Q Consensus 209 ~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~L--kpgG~lvysTC 276 (329)
..+..|.++.++-.+..+.+. ..+.++.... ..-...+++.+...+ +.+|++|+.+.
T Consensus 79 ----~~g~id~lv~nAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS 141 (246)
T 3osu_A 79 ----QFGSLDVLVNNAGITRDNLLM-------RMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSS 141 (246)
T ss_dssp ----HHSCCCEEEECCCCCCCCCTT-------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred ----HcCCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 014789999887544332221 1222322221 112233455555444 35678887643
No 481
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=90.94 E-value=1.5 Score=38.54 Aligned_cols=61 Identities=13% Similarity=0.178 Sum_probs=46.0
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCc--eEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLK--ATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~--v~~~~~D~~~~~ 193 (329)
.|.+||=.| |+|+.+.++++.+ +.+|++++.++.+++.+.+.+...+.. +.++.+|..+..
T Consensus 31 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 96 (279)
T 1xg5_A 31 RDRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEE 96 (279)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHH
Confidence 356777666 5577888877653 369999999999998888888777643 678889988754
No 482
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=90.94 E-value=1.4 Score=38.92 Aligned_cols=128 Identities=9% Similarity=0.004 Sum_probs=72.3
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhH-------HHHHHHHHHHcCCceEEEecCccccch-hhhhhh
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSR-------LNMISENLKRLNLKATLILSDISKINL-KKLYID 200 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~r-------l~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~ 200 (329)
.|.++|=.|++ |+.+.++++.+ +.+|+.++.+... ++.+.+.+...+.++.++..|..+... ..+. .
T Consensus 5 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~-~ 82 (274)
T 3e03_A 5 SGKTLFITGAS-RGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV-A 82 (274)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH-H
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH-H
Confidence 36677777765 66777776543 3699999998764 666666777777778889999987541 0000 0
Q ss_pred hcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCC--CCCEEEEE
Q psy15212 201 INKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLK--PGGKLLFV 274 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~Lk--pgG~lvys 274 (329)
... . ..+..|.++.++--...+.+. ..+.++.... ..-...+.+.+...++ .+|++|+.
T Consensus 83 ---~~~---~--~~g~iD~lvnnAG~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~i 147 (274)
T 3e03_A 83 ---ATV---D--TFGGIDILVNNASAIWLRGTL-------DTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTL 147 (274)
T ss_dssp ---HHH---H--HHSCCCEEEECCCCCCCCCGG-------GSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEEC
T ss_pred ---HHH---H--HcCCCCEEEECCCcccCCCcc-------cCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEE
Confidence 000 0 014789999877433222221 1222332221 1222345556655553 35788876
Q ss_pred cC
Q psy15212 275 TC 276 (329)
Q Consensus 275 TC 276 (329)
+.
T Consensus 148 sS 149 (274)
T 3e03_A 148 AP 149 (274)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 483
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=90.90 E-value=1.6 Score=39.07 Aligned_cols=61 Identities=20% Similarity=0.163 Sum_probs=46.3
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CC---EEEEEeCChhHHHHHHHHHHHc--CCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DI---KLISVDNNLSRLNMISENLKRL--NLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~---~v~avD~~~~rl~~l~~n~~~~--g~~v~~~~~D~~~~~ 193 (329)
.|.++|=.|++ |+++.++++.+ +. .|+.++.+...++.+.+.+... +..+.++.+|.++..
T Consensus 32 ~~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~ 100 (287)
T 3rku_A 32 AKKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAE 100 (287)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGG
T ss_pred CCCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH
Confidence 36678877754 66777777654 23 9999999999999888888765 445788899998754
No 484
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=90.88 E-value=0.96 Score=39.84 Aligned_cols=61 Identities=18% Similarity=0.186 Sum_probs=46.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeC-ChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDN-NLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~-~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.+||=.|++ |+.+.++++.+ +.+|+.++. +....+.+.+.++..+..+.++..|..+..
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 92 (271)
T 4iin_A 28 TGKNVLITGAS-KGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASES 92 (271)
T ss_dssp SCCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence 36677766654 66777777653 369999998 677778888888888878889999988754
No 485
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=90.81 E-value=1.4 Score=38.62 Aligned_cols=60 Identities=5% Similarity=0.000 Sum_probs=42.9
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEe-CChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVD-NNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD-~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
+..+|=.| |+|+.+.++++.+ +.+|+.++ .+...++.....+...+..+.++.+|..+..
T Consensus 25 ~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 88 (269)
T 3gk3_A 25 KRVAFVTG-GMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFE 88 (269)
T ss_dssp CCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHH
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHH
Confidence 55667555 4577887777654 36898888 6666777666666666667889999998754
No 486
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=90.80 E-value=0.83 Score=40.69 Aligned_cols=61 Identities=8% Similarity=0.091 Sum_probs=45.0
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCc-eEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLK-ATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~-v~~~~~D~~~~~ 193 (329)
.|.++|=.|+ +|+.+.++++.+ +.+|+.+|.++..++.+.+.+...+-. +.++.+|.++..
T Consensus 32 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 96 (281)
T 4dry_A 32 EGRIALVTGG-GTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPD 96 (281)
T ss_dssp --CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHH
Confidence 3667776665 567888777654 369999999999998888887765544 588899988754
No 487
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=90.74 E-value=0.93 Score=39.23 Aligned_cols=135 Identities=11% Similarity=0.140 Sum_probs=77.1
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEE-eCChhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISV-DNNLSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~av-D~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~~ 206 (329)
.|.+||=.|++ |+.+.++++.+ +.+|+.+ +.+...++.+.+.+...+..+.++..|..+... ..+.-.......
T Consensus 6 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (255)
T 3icc_A 6 KGKVALVTGAS-RGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 84 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence 36677766655 66777777654 3577664 677888888888888777778888899887541 000000000000
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcCC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTCS 277 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTCS 277 (329)
.+ ......|.++.++-....+.+. ..+.++.... ..-...+++.+...++++|++|+.+..
T Consensus 85 ~~---~~~~~id~lv~nAg~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~ 149 (255)
T 3icc_A 85 NR---TGSTKFDILINNAGIGPGAFIE-------ETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA 149 (255)
T ss_dssp HH---HSSSCEEEEEECCCCCCCBCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred cc---ccCCcccEEEECCCCCCCCChh-------hCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCCh
Confidence 00 0123589999877543222221 1223333222 223345777788888888988887543
No 488
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=90.72 E-value=1.3 Score=38.57 Aligned_cols=60 Identities=13% Similarity=0.075 Sum_probs=43.5
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhH-HHHHHHHHHHc-CCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSR-LNMISENLKRL-NLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~r-l~~l~~n~~~~-g~~v~~~~~D~~~~~ 193 (329)
|.+||=.|+ +|+.+.++++.+ +.+|+.++.++.. ++.+.+.+... +..+.++.+|..+..
T Consensus 4 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 68 (260)
T 1x1t_A 4 GKVAVVTGS-TSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE 68 (260)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHH
Confidence 556776665 567888777654 3699999999887 77777666554 666788889988754
No 489
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=90.68 E-value=2.3 Score=37.57 Aligned_cols=132 Identities=11% Similarity=0.044 Sum_probs=70.0
Q ss_pred CCCeEEeecCCC-chHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhccccc
Q psy15212 132 SGMYVLDACSAP-GGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag~-G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~~ 206 (329)
.|.+||=.|+++ |+.+.++++.+ +.+|+.++.++..-+.+++..+..+ .+.++.+|..+... ..+. . ...
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~-~---~~~ 94 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLK-K---FLE 94 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHH-H---HHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHH-H---HHH
Confidence 467889888874 88888887654 3699999998853223333223333 25678889887531 0000 0 000
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCC-CCCEEEEEcC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLK-PGGKLLFVTC 276 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~Lk-pgG~lvysTC 276 (329)
. ..+..|.++.++-......+. .| ....+.++.... ..-...+++.+.+.++ .+|++|+.+.
T Consensus 95 ---~--~~g~iD~lv~~Ag~~~~~~~~-~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS 161 (285)
T 2p91_A 95 ---E--NWGSLDIIVHSIAYAPKEEFK-GG--VIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSY 161 (285)
T ss_dssp ---H--HTSCCCEEEECCCCCCGGGGS-SC--GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEEC
T ss_pred ---H--HcCCCCEEEECCCCCCcccCC-CC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEcc
Confidence 0 114789999877433210000 00 011223332222 1223456677777665 5788887653
No 490
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=90.39 E-value=1.7 Score=37.29 Aligned_cols=60 Identities=18% Similarity=0.065 Sum_probs=44.6
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CC-------EEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DI-------KLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~-------~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
+.+||=.| |+|+.+.++++.+ +. .|++++.++..++.+.+.+...+..+.++.+|..+..
T Consensus 2 ~k~vlITG-asggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 71 (244)
T 2bd0_A 2 KHILLITG-AGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMA 71 (244)
T ss_dssp CEEEEEET-TTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHH
Confidence 34566555 5677888877654 24 8999999999888888777766666888899988753
No 491
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=90.39 E-value=0.86 Score=42.84 Aligned_cols=108 Identities=17% Similarity=0.162 Sum_probs=70.5
Q ss_pred echhHHHHhhhcCCCCCCeEEeecCCCchHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhh
Q psy15212 117 QDAAAQLAAPLLDIRSGMYVLDACSAPGGKTCHLLEIADIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKK 196 (329)
Q Consensus 117 Qd~~s~l~~~~l~~~~g~~VLDlcag~G~kt~~la~~~~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~ 196 (329)
+|+++++....+.... .+||++..+-|..++.++. ...++.+.-+...... ++++|+.... .+. ..
T Consensus 31 ~~~~~~~l~~~~~~~~-~~~l~~n~~~g~~~~~~~~--~~~~~~~~~~~~~~~~----l~~~~~~~~~--~~~--~~--- 96 (381)
T 3dmg_A 31 RDPVHDLLQKTVEPFG-ERALDLNPGVGWGSLPLEG--RMAVERLETSRAAFRC----LTASGLQARL--ALP--WE--- 96 (381)
T ss_dssp SCHHHHHHHTTCCCCS-SEEEESSCTTSTTTGGGBT--TBEEEEEECBHHHHHH----HHHTTCCCEE--CCG--GG---
T ss_pred CChHHHHHHHHHHHhC-CcEEEecCCCCccccccCC--CCceEEEeCcHHHHHH----HHHcCCCccc--cCC--cc---
Confidence 5699999999887654 5999999999987766652 2467776444433333 7778887532 111 11
Q ss_pred hhhhhcccccccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Q psy15212 197 LYIDINKKTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 274 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpgG~lvys 274 (329)
.....||.|++-.|=+ +...+ -...|..+...|++||.|+.+
T Consensus 97 ---------------~~~~~~d~v~~~~Pk~------------------k~~~~---~~~~l~~~~~~l~~g~~i~~~ 138 (381)
T 3dmg_A 97 ---------------AAAGAYDLVVLALPAG------------------RGTAY---VQASLVAAARALRMGGRLYLA 138 (381)
T ss_dssp ---------------SCTTCEEEEEEECCGG------------------GCHHH---HHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------CCcCCCCEEEEECCcc------------------hhHHH---HHHHHHHHHHhCCCCCEEEEE
Confidence 1246899999887721 11111 133577788889999998865
No 492
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=90.37 E-value=0.78 Score=40.39 Aligned_cols=133 Identities=16% Similarity=0.212 Sum_probs=71.7
Q ss_pred CCCeEEeecC-CCchHHHHHHHhC---CCEEEEEeCChhH-HHHHHHHHHHcCCceEEEecCccccch-hhhhhhhcccc
Q psy15212 132 SGMYVLDACS-APGGKTCHLLEIA---DIKLISVDNNLSR-LNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKT 205 (329)
Q Consensus 132 ~g~~VLDlca-g~G~kt~~la~~~---~~~v~avD~~~~r-l~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~ 205 (329)
.|.++|=.|+ |+|+.+.++++.+ +.+|+.+|.++.. ++.+. +..+.++.++.+|..+... ..+. . ..
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~-~---~~ 78 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT---DRLPAKAPLLELDVQNEEHLASLA-G---RV 78 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH---TTSSSCCCEEECCTTCHHHHHHHH-H---HH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH---HhcCCCceEEEccCCCHHHHHHHH-H---HH
Confidence 3678888888 4888988888754 3699999998765 33332 2334456788889887541 0000 0 00
Q ss_pred cccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEc
Q psy15212 206 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVT 275 (329)
Q Consensus 206 ~~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysT 275 (329)
...+. ....+|.++.++-....... ........+.++.... ..-...+++.+.+.++++|++|+.+
T Consensus 79 ~~~~g--~~~~iD~lv~nAg~~~~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 79 TEAIG--AGNKLDGVVHSIGFMPQTGM--GINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp HHHHC--TTCCEEEEEECCCCCCGGGS--TTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHhC--CCCCceEEEECCccCccccc--cccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 00000 01278999987643210000 0000112233333222 2223456777888887788888764
No 493
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=90.37 E-value=1.5 Score=38.88 Aligned_cols=60 Identities=7% Similarity=0.131 Sum_probs=42.3
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKIN 193 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~ 193 (329)
.|.++|=.|++ |+.+.++++.+ +.+|+.+|. ...++.+.+.+...+..+.++.+|..+..
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 92 (273)
T 3uf0_A 30 AGRTAVVTGAG-SGIGRAIAHGYARAGAHVLAWGR-TDGVKEVADEIADGGGSAEAVVADLADLE 92 (273)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEES-STHHHHHHHHHHTTTCEEEEEECCTTCHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEcC-HHHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 36678877765 66777777654 369999994 45566666666666666888899988754
No 494
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=90.36 E-value=2.3 Score=37.70 Aligned_cols=58 Identities=7% Similarity=0.014 Sum_probs=43.3
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCCh-hHHHHHHHHHH-HcCCceEEEecCccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNL-SRLNMISENLK-RLNLKATLILSDISK 191 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~-~rl~~l~~n~~-~~g~~v~~~~~D~~~ 191 (329)
|.++|=.|+ +|+.+.++++.+ +.+|+.++.+. ..++.+.+.+. ..+..+.++.+|.++
T Consensus 23 ~k~~lVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~ 85 (288)
T 2x9g_A 23 APAAVVTGA-AKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN 85 (288)
T ss_dssp CCEEEETTC-SSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSC
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCC
Confidence 556776665 467887777654 36999999998 88877777765 556568888999887
No 495
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=90.29 E-value=1.3 Score=38.77 Aligned_cols=132 Identities=11% Similarity=0.048 Sum_probs=70.5
Q ss_pred CCCeEEeecCC-CchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccch-hhhhhhhccccc
Q psy15212 132 SGMYVLDACSA-PGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINL-KKLYIDINKKTN 206 (329)
Q Consensus 132 ~g~~VLDlcag-~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~-~~~~~~~~~~~~ 206 (329)
.|.+||=.|++ +|+.+.++++.+ +.+|+.++.++..-+.+++..+..+ .+.++.+|..+... ..+. . ...
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~-~---~~~ 81 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALF-A---GVK 81 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHH-H---HHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHH-H---HHH
Confidence 36688888886 388888887654 3699999998863333333333333 26778899887541 0000 0 000
Q ss_pred ccccccCCCCCCEEEEccCCccccccccCCCCcccCChhHHHHH----HHHHHHHHHHHHhcCCCCCEEEEEcC
Q psy15212 207 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----SKYSCKILNNLWKMLKPGGKLLFVTC 276 (329)
Q Consensus 207 ~~~~~~~~~~fD~Vl~D~PCsg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpgG~lvysTC 276 (329)
. ..+..|.++.++-......+. .| ....+.++.... ..-...+++.+.+.++.+|++|+.+.
T Consensus 82 ~-----~~g~iD~lv~~Ag~~~~~~~~-~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 147 (261)
T 2wyu_A 82 E-----AFGGLDYLVHAIAFAPREAME-GR--YIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTY 147 (261)
T ss_dssp H-----HHSSEEEEEECCCCCCHHHHS-SC--GGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEEC
T ss_pred H-----HcCCCCEEEECCCCCCcccCC-CC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 0 013689999877432210000 00 011223332222 22334566777777766788887643
No 496
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=90.28 E-value=1.2 Score=38.42 Aligned_cols=82 Identities=17% Similarity=0.191 Sum_probs=51.6
Q ss_pred CCCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCCceEEEecCccccchhhhhhhhcccccc
Q psy15212 131 RSGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNLKATLILSDISKINLKKLYIDINKKTNN 207 (329)
Q Consensus 131 ~~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 207 (329)
.++.+||=.|+ +|+.+.++++.+ +.+|+.++.+...++.+.+.+. -.+.+...|..+... +. .
T Consensus 12 ~~~k~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~--~~--------~ 77 (249)
T 3f9i_A 12 LTGKTSLITGA-SSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEE--CS--------N 77 (249)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHH--HH--------H
T ss_pred CCCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHH--HH--------H
Confidence 34667886665 566777777653 3699999999988877665543 347788888876431 00 0
Q ss_pred cccccCCCCCCEEEEccCCcc
Q psy15212 208 RFRFYKNKYFDRILADLPCTG 228 (329)
Q Consensus 208 ~~~~~~~~~fD~Vl~D~PCsg 228 (329)
.+. .....|.++.++-...
T Consensus 78 ~~~--~~~~id~li~~Ag~~~ 96 (249)
T 3f9i_A 78 LIS--KTSNLDILVCNAGITS 96 (249)
T ss_dssp HHH--TCSCCSEEEECCC---
T ss_pred HHH--hcCCCCEEEECCCCCC
Confidence 000 1246899998875443
No 497
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=90.28 E-value=1.3 Score=38.01 Aligned_cols=60 Identities=8% Similarity=0.059 Sum_probs=42.7
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHH-HHcCCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENL-KRLNLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~-~~~g~~v~~~~~D~~~~~ 193 (329)
+.+||=.|+ +|+.+.++++.+ +.+|++++.++..++.+.+.+ +..+.++.++.+|..+..
T Consensus 2 ~k~vlItGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 65 (250)
T 2cfc_A 2 SRVAIVTGA-SSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEG 65 (250)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHH
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 446676664 577888877654 369999999998887776665 333445788889988754
No 498
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=90.26 E-value=1.8 Score=39.48 Aligned_cols=59 Identities=15% Similarity=0.048 Sum_probs=44.6
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEe-CChhHHHHHHHHHH-HcCCceEEEecCcccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVD-NNLSRLNMISENLK-RLNLKATLILSDISKI 192 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD-~~~~rl~~l~~n~~-~~g~~v~~~~~D~~~~ 192 (329)
|..||=.|+ +|+++.++++.+ +.+|+.++ .++..++.+.+.+. ..+..+.++.+|..+.
T Consensus 46 ~k~~lVTGa-s~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~ 109 (328)
T 2qhx_A 46 VPVALVTGA-AKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV 109 (328)
T ss_dssp CCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCc
Confidence 556776554 577888887654 36999999 99998888877776 5566688888998764
No 499
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=90.22 E-value=2.4 Score=36.37 Aligned_cols=57 Identities=12% Similarity=0.183 Sum_probs=43.4
Q ss_pred CCCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHcCC-ceEEEecCc
Q psy15212 132 SGMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRLNL-KATLILSDI 189 (329)
Q Consensus 132 ~g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~g~-~v~~~~~D~ 189 (329)
.|.+||=.|+ +|+.+.++++.+ +.+|+.++.++..++.+.+.++..+. .+.++..|.
T Consensus 13 ~~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~ 73 (247)
T 3i1j_A 13 KGRVILVTGA-ARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNL 73 (247)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCT
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecc
Confidence 3667776665 577887777654 36999999999999999998888764 367777776
No 500
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=90.20 E-value=1.4 Score=38.47 Aligned_cols=60 Identities=13% Similarity=0.196 Sum_probs=43.8
Q ss_pred CCeEEeecCCCchHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHc--CCceEEEecCccccc
Q psy15212 133 GMYVLDACSAPGGKTCHLLEIA---DIKLISVDNNLSRLNMISENLKRL--NLKATLILSDISKIN 193 (329)
Q Consensus 133 g~~VLDlcag~G~kt~~la~~~---~~~v~avD~~~~rl~~l~~n~~~~--g~~v~~~~~D~~~~~ 193 (329)
|.+||=.|+ +|+.+.++++.+ +.+|++++.++..++.+.+.+... +..+.++.+|..+..
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 71 (260)
T 2z1n_A 7 GKLAVVTAG-SSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPG 71 (260)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHH
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHH
Confidence 567777765 467777777653 369999999998888777766543 335778889988753
Done!