Query psy15213
Match_columns 139
No_of_seqs 167 out of 1173
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 23:35:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fzv_A Putative methyltransfer 100.0 3.8E-37 1.3E-41 256.7 6.5 114 23-138 220-359 (359)
2 3m4x_A NOL1/NOP2/SUN family pr 100.0 1.9E-33 6.7E-38 240.4 10.0 111 24-138 173-304 (456)
3 3m6w_A RRNA methylase; rRNA me 100.0 7.6E-33 2.6E-37 237.2 12.8 112 24-138 168-301 (464)
4 2b9e_A NOL1/NOP2/SUN domain fa 100.0 3.6E-33 1.2E-37 227.8 9.1 110 25-138 173-302 (309)
5 2frx_A Hypothetical protein YE 100.0 2.6E-31 9E-36 228.0 13.0 112 24-138 185-312 (479)
6 1sqg_A SUN protein, FMU protei 100.0 2.1E-31 7E-36 224.1 10.7 118 17-137 306-429 (429)
7 2yxl_A PH0851 protein, 450AA l 100.0 2.9E-31 9.8E-36 224.8 8.2 113 23-138 327-450 (450)
8 1ixk_A Methyltransferase; open 100.0 1.6E-30 5.4E-35 211.2 11.7 110 24-137 185-315 (315)
9 3ajd_A Putative methyltransfer 99.9 2.3E-27 7.7E-32 188.5 7.6 104 24-137 154-274 (274)
10 4dmg_A Putative uncharacterize 98.8 3.8E-09 1.3E-13 88.3 5.8 65 26-103 280-346 (393)
11 1wxx_A TT1595, hypothetical pr 98.6 3.3E-08 1.1E-12 81.5 6.2 74 24-110 277-353 (382)
12 2as0_A Hypothetical protein PH 98.5 2.1E-07 7.3E-12 76.7 6.7 75 24-111 287-364 (396)
13 1inl_A Spermidine synthase; be 98.4 1.7E-07 5.7E-12 75.0 3.5 88 24-133 161-250 (296)
14 3v97_A Ribosomal RNA large sub 98.3 1.9E-07 6.5E-12 83.2 3.3 78 11-99 592-671 (703)
15 3c0k_A UPF0064 protein YCCW; P 98.3 3.1E-07 1.1E-11 75.8 2.7 74 24-110 291-367 (396)
16 2dul_A N(2),N(2)-dimethylguano 98.1 2.9E-07 9.8E-12 76.5 -0.0 83 25-137 130-233 (378)
17 3duw_A OMT, O-methyltransferas 98.1 4.2E-06 1.4E-10 62.6 5.9 81 25-136 132-223 (223)
18 3id6_C Fibrillarin-like rRNA/T 98.1 1.9E-06 6.6E-11 67.3 3.3 68 25-119 145-219 (232)
19 2b78_A Hypothetical protein SM 98.1 1.4E-06 4.7E-11 72.1 2.6 68 24-104 283-352 (385)
20 3u81_A Catechol O-methyltransf 98.0 9.3E-06 3.2E-10 61.1 6.5 83 25-137 133-215 (221)
21 3tfw_A Putative O-methyltransf 98.0 1.7E-05 5.9E-10 61.1 7.1 82 24-137 134-227 (248)
22 3dou_A Ribosomal RNA large sub 97.9 2.2E-05 7.5E-10 58.7 6.7 66 25-104 90-155 (191)
23 2b3t_A Protein methyltransfera 97.9 3.5E-05 1.2E-09 60.0 7.3 94 24-133 174-274 (276)
24 3lpm_A Putative methyltransfer 97.8 0.00011 3.9E-09 56.5 8.6 102 24-137 117-219 (259)
25 2igt_A SAM dependent methyltra 97.7 9.9E-06 3.4E-10 65.9 2.3 65 24-102 223-288 (332)
26 2gpy_A O-methyltransferase; st 97.7 2.4E-05 8.1E-10 59.1 4.1 41 24-89 124-164 (233)
27 3bt7_A TRNA (uracil-5-)-methyl 97.7 2.9E-05 1E-09 63.5 4.7 74 26-137 295-369 (369)
28 3axs_A Probable N(2),N(2)-dime 97.7 4.3E-06 1.5E-10 70.0 -0.8 54 24-104 123-176 (392)
29 2frn_A Hypothetical protein PH 97.6 4.8E-05 1.7E-09 59.8 3.8 64 15-104 181-247 (278)
30 3c3y_A Pfomt, O-methyltransfer 97.5 0.00014 4.8E-09 55.7 5.9 75 24-134 145-235 (237)
31 3tma_A Methyltransferase; thum 97.4 0.00048 1.6E-08 55.6 8.0 63 25-109 271-333 (354)
32 3r3h_A O-methyltransferase, SA 97.4 0.00032 1.1E-08 54.0 6.6 77 25-137 135-222 (242)
33 2ih2_A Modification methylase 97.2 0.0021 7.3E-08 52.2 10.0 99 16-119 88-198 (421)
34 2qm3_A Predicted methyltransfe 97.2 0.00065 2.2E-08 55.5 6.8 53 25-102 240-296 (373)
35 2plw_A Ribosomal RNA methyltra 97.2 0.0021 7.3E-08 46.7 8.5 68 23-104 103-170 (201)
36 4dzr_A Protein-(glutamine-N5) 97.1 0.0008 2.7E-08 48.9 5.6 75 25-102 100-178 (215)
37 2yx1_A Hypothetical protein MJ 97.1 0.00034 1.2E-08 56.5 3.8 47 15-89 249-295 (336)
38 1ej0_A FTSJ; methyltransferase 97.0 0.0017 6E-08 45.2 6.8 68 22-103 84-151 (180)
39 3adn_A Spermidine synthase; am 97.0 0.00061 2.1E-08 54.4 4.6 100 11-133 140-243 (294)
40 3eey_A Putative rRNA methylase 96.9 0.0011 3.9E-08 48.1 5.1 68 24-104 91-160 (197)
41 2f8l_A Hypothetical protein LM 96.9 0.00034 1.2E-08 56.3 2.4 105 24-137 199-305 (344)
42 2okc_A Type I restriction enzy 96.9 0.0021 7.3E-08 53.6 7.3 85 25-118 252-343 (445)
43 3evz_A Methyltransferase; NYSG 96.9 0.0021 7.2E-08 47.8 6.2 75 24-104 121-196 (230)
44 1i1n_A Protein-L-isoaspartate 96.8 0.00018 6.1E-09 53.7 0.1 46 24-97 149-194 (226)
45 2bm8_A Cephalosporin hydroxyla 96.8 0.0028 9.5E-08 48.5 6.7 79 25-133 151-232 (236)
46 2qfm_A Spermine synthase; sper 96.8 0.0013 4.6E-08 54.6 5.2 81 12-104 248-333 (364)
47 3mti_A RRNA methylase; SAM-dep 96.8 0.003 1E-07 45.4 6.3 67 24-104 87-156 (185)
48 1mjf_A Spermidine synthase; sp 96.7 0.00079 2.7E-08 53.0 3.1 86 24-133 150-237 (281)
49 3ntv_A MW1564 protein; rossman 96.7 0.0038 1.3E-07 47.2 6.6 40 24-88 140-179 (232)
50 1iy9_A Spermidine synthase; ro 96.7 0.0019 6.3E-08 50.8 5.0 67 24-108 146-214 (275)
51 1sui_A Caffeoyl-COA O-methyltr 96.6 0.0023 7.8E-08 49.3 4.9 38 24-86 154-191 (247)
52 2ozv_A Hypothetical protein AT 96.6 0.0047 1.6E-07 47.7 6.6 72 24-103 113-184 (260)
53 2nyu_A Putative ribosomal RNA 96.6 0.0046 1.6E-07 44.6 5.9 63 25-100 96-158 (196)
54 2pt6_A Spermidine synthase; tr 96.5 0.0011 3.8E-08 53.4 2.7 68 24-109 187-256 (321)
55 3c3p_A Methyltransferase; NP_9 96.5 0.0031 1.1E-07 46.5 4.9 38 27-89 127-164 (210)
56 3dr5_A Putative O-methyltransf 96.5 0.0033 1.1E-07 47.7 4.9 40 24-88 127-166 (221)
57 3cbg_A O-methyltransferase; cy 96.4 0.0061 2.1E-07 46.1 6.0 73 25-133 147-230 (232)
58 3bwc_A Spermidine synthase; SA 96.4 0.0041 1.4E-07 49.5 5.2 46 24-87 167-212 (304)
59 2ar0_A M.ecoki, type I restric 96.4 0.0076 2.6E-07 52.0 7.1 87 24-119 259-349 (541)
60 3tr6_A O-methyltransferase; ce 96.4 0.0067 2.3E-07 44.9 6.0 39 25-88 139-177 (225)
61 1o9g_A RRNA methyltransferase; 96.3 0.0052 1.8E-07 46.6 5.2 52 24-88 166-217 (250)
62 1nv8_A HEMK protein; class I a 96.1 0.0013 4.5E-08 51.9 1.0 72 25-103 188-263 (284)
63 1yb2_A Hypothetical protein TA 96.1 0.0012 4.2E-08 51.2 0.8 47 16-89 169-215 (275)
64 2o07_A Spermidine synthase; st 96.1 0.0029 9.9E-08 50.6 3.0 46 24-87 166-211 (304)
65 3o4f_A Spermidine synthase; am 96.1 0.016 5.5E-07 46.8 7.2 101 10-133 139-243 (294)
66 3k6r_A Putative transferase PH 96.1 0.0047 1.6E-07 49.2 4.0 63 16-104 182-247 (278)
67 1dus_A MJ0882; hypothetical pr 96.0 0.011 3.7E-07 41.9 5.4 52 17-89 110-161 (194)
68 2i7c_A Spermidine synthase; tr 96.0 0.0037 1.3E-07 49.2 3.1 47 24-88 149-195 (283)
69 2avd_A Catechol-O-methyltransf 96.0 0.01 3.6E-07 43.9 5.4 73 25-133 144-227 (229)
70 1o54_A SAM-dependent O-methylt 95.9 0.017 6E-07 44.4 6.6 46 16-88 171-216 (277)
71 3e23_A Uncharacterized protein 95.9 0.031 1E-06 40.8 7.5 92 23-138 99-202 (211)
72 3cgg_A SAM-dependent methyltra 95.9 0.056 1.9E-06 38.1 8.7 89 24-137 105-195 (195)
73 3khk_A Type I restriction-modi 95.7 0.011 3.8E-07 51.1 5.0 97 22-118 325-432 (544)
74 3p9n_A Possible methyltransfer 95.6 0.027 9.1E-07 40.7 6.1 45 24-89 111-157 (189)
75 2b2c_A Spermidine synthase; be 95.5 0.01 3.5E-07 47.7 3.7 48 24-89 179-226 (314)
76 2jjq_A Uncharacterized RNA met 95.4 0.024 8.1E-07 47.4 5.9 22 16-38 344-365 (425)
77 2cmg_A Spermidine synthase; tr 95.4 0.032 1.1E-06 43.5 6.2 45 15-88 130-174 (262)
78 3ofk_A Nodulation protein S; N 95.4 0.071 2.4E-06 38.8 7.7 66 65-138 134-206 (216)
79 3mb5_A SAM-dependent methyltra 95.3 0.052 1.8E-06 40.8 7.1 44 15-85 151-194 (255)
80 3gdh_A Trimethylguanosine synt 95.3 0.022 7.5E-07 42.5 4.9 28 16-43 134-161 (241)
81 3njr_A Precorrin-6Y methylase; 95.3 0.052 1.8E-06 40.2 7.0 35 67-104 136-170 (204)
82 2p41_A Type II methyltransfera 95.2 0.088 3E-06 42.0 8.5 65 24-106 146-212 (305)
83 1xdz_A Methyltransferase GIDB; 95.2 0.067 2.3E-06 40.2 7.3 67 64-137 153-219 (240)
84 2zig_A TTHA0409, putative modi 95.2 0.017 5.9E-07 45.5 4.1 62 23-86 37-98 (297)
85 2ift_A Putative methylase HI07 95.0 0.012 4.3E-07 43.4 2.7 43 24-89 122-167 (201)
86 3dmg_A Probable ribosomal RNA 95.0 0.02 6.8E-07 47.2 4.0 51 24-91 296-346 (381)
87 1g60_A Adenine-specific methyl 94.9 0.016 5.3E-07 44.9 3.2 57 23-87 20-76 (260)
88 1yzh_A TRNA (guanine-N(7)-)-me 94.9 0.039 1.3E-06 40.6 5.2 51 22-86 107-157 (214)
89 3a27_A TYW2, uncharacterized p 94.9 0.0064 2.2E-07 47.4 0.9 41 24-91 184-224 (272)
90 1uwv_A 23S rRNA (uracil-5-)-me 94.9 0.089 3E-06 43.7 7.9 77 25-137 355-432 (433)
91 2pwy_A TRNA (adenine-N(1)-)-me 94.7 0.069 2.4E-06 39.9 6.2 40 22-88 162-201 (258)
92 2xyq_A Putative 2'-O-methyl tr 94.7 0.095 3.3E-06 41.8 7.2 66 25-104 122-187 (290)
93 2yvl_A TRMI protein, hypotheti 94.6 0.056 1.9E-06 40.2 5.5 39 23-88 155-193 (248)
94 3vyw_A MNMC2; tRNA wobble urid 94.6 0.029 1E-06 45.6 4.0 58 24-110 184-243 (308)
95 3orh_A Guanidinoacetate N-meth 94.5 0.0084 2.9E-07 45.6 0.6 47 22-85 124-170 (236)
96 3e05_A Precorrin-6Y C5,15-meth 94.4 0.073 2.5E-06 38.7 5.7 52 25-104 107-158 (204)
97 3lkd_A Type I restriction-modi 94.3 0.047 1.6E-06 47.2 5.0 95 24-119 295-395 (542)
98 3hm2_A Precorrin-6Y C5,15-meth 94.3 0.059 2E-06 37.8 4.8 37 65-104 107-143 (178)
99 4dcm_A Ribosomal RNA large sub 94.3 0.032 1.1E-06 45.8 3.7 58 17-91 283-340 (375)
100 3tm4_A TRNA (guanine N2-)-meth 94.3 0.035 1.2E-06 45.2 3.9 58 25-104 285-342 (373)
101 1wy7_A Hypothetical protein PH 94.3 0.067 2.3E-06 38.8 5.1 55 25-104 111-165 (207)
102 1boo_A Protein (N-4 cytosine-s 94.3 0.048 1.6E-06 43.7 4.7 58 22-87 29-86 (323)
103 2fhp_A Methylase, putative; al 94.3 0.048 1.6E-06 38.6 4.2 46 24-90 114-159 (187)
104 2fpo_A Methylase YHHF; structu 93.9 0.041 1.4E-06 40.5 3.3 44 24-90 120-165 (202)
105 1uir_A Polyamine aminopropyltr 93.8 0.022 7.4E-07 45.5 1.8 49 24-87 149-197 (314)
106 2esr_A Methyltransferase; stru 93.7 0.059 2E-06 38.1 3.7 19 72-90 125-143 (177)
107 2vdv_E TRNA (guanine-N(7)-)-me 93.6 0.06 2E-06 40.7 3.8 72 64-138 152-235 (246)
108 3lcc_A Putative methyl chlorid 93.6 0.52 1.8E-05 34.7 9.0 75 15-110 121-202 (235)
109 1l3i_A Precorrin-6Y methyltran 93.4 0.066 2.2E-06 37.7 3.6 52 25-104 99-150 (192)
110 1i9g_A Hypothetical protein RV 93.4 0.099 3.4E-06 39.8 4.9 38 24-88 169-206 (280)
111 1ws6_A Methyltransferase; stru 93.3 0.065 2.2E-06 37.3 3.3 46 25-92 109-154 (171)
112 1xj5_A Spermidine synthase 1; 93.3 0.041 1.4E-06 44.6 2.5 64 24-105 192-257 (334)
113 2hwk_A Helicase NSP2; rossman 93.2 0.26 8.7E-06 40.1 7.0 94 25-136 205-298 (320)
114 2fca_A TRNA (guanine-N(7)-)-me 93.0 0.16 5.6E-06 37.6 5.4 50 22-85 104-153 (213)
115 2qy6_A UPF0209 protein YFCK; s 92.8 0.051 1.7E-06 42.5 2.4 57 26-111 173-231 (257)
116 3s1s_A Restriction endonucleas 92.8 0.29 1E-05 44.8 7.6 89 24-119 397-504 (878)
117 1nt2_A Fibrillarin-like PRE-rR 92.7 0.3 1E-05 36.3 6.5 20 66-85 142-161 (210)
118 3hnr_A Probable methyltransfer 92.4 0.59 2E-05 33.8 7.6 26 65-90 125-150 (220)
119 2pjd_A Ribosomal RNA small sub 92.1 0.11 3.6E-06 41.6 3.5 51 24-91 259-309 (343)
120 3jwg_A HEN1, methyltransferase 92.0 1 3.4E-05 32.7 8.5 23 65-87 121-143 (219)
121 1eg2_A Modification methylase 91.9 0.058 2E-06 43.5 1.7 55 22-89 54-109 (319)
122 3h2b_A SAM-dependent methyltra 91.9 0.49 1.7E-05 33.9 6.6 45 65-110 121-177 (203)
123 3grz_A L11 mtase, ribosomal pr 91.8 0.12 4.2E-06 37.4 3.3 58 24-110 123-180 (205)
124 3trk_A Nonstructural polyprote 91.4 0.64 2.2E-05 37.6 7.3 74 25-110 210-284 (324)
125 3q87_B N6 adenine specific DNA 91.3 0.2 6.7E-06 35.8 3.9 69 23-109 75-143 (170)
126 2pxx_A Uncharacterized protein 91.2 0.19 6.4E-06 36.1 3.8 58 24-88 105-162 (215)
127 1g8a_A Fibrillarin-like PRE-rR 91.1 0.085 2.9E-06 39.0 1.8 37 25-85 142-178 (227)
128 3ou2_A SAM-dependent methyltra 91.1 0.24 8.3E-06 35.6 4.3 53 16-88 97-149 (218)
129 2hnk_A SAM-dependent O-methylt 90.9 0.18 6.3E-06 37.6 3.5 40 25-89 146-185 (239)
130 3kkz_A Uncharacterized protein 90.7 0.28 9.7E-06 37.0 4.5 28 65-92 130-157 (267)
131 2a14_A Indolethylamine N-methy 90.7 0.91 3.1E-05 34.4 7.4 70 64-137 176-260 (263)
132 2ipx_A RRNA 2'-O-methyltransfe 90.7 0.1 3.5E-06 38.8 1.9 39 24-86 145-183 (233)
133 3gjy_A Spermidine synthase; AP 90.5 0.29 9.9E-06 39.6 4.6 69 24-110 157-226 (317)
134 3ckk_A TRNA (guanine-N(7)-)-me 90.5 0.19 6.6E-06 38.1 3.4 41 64-110 147-190 (235)
135 3c6k_A Spermine synthase; sper 90.5 0.27 9.1E-06 41.0 4.4 55 24-90 282-337 (381)
136 1jsx_A Glucose-inhibited divis 90.4 0.24 8.3E-06 35.7 3.7 24 65-88 145-168 (207)
137 3dxy_A TRNA (guanine-N(7)-)-me 90.3 0.19 6.5E-06 37.7 3.2 45 64-111 129-173 (218)
138 3dtn_A Putative methyltransfer 90.0 0.32 1.1E-05 35.7 4.1 45 25-89 108-152 (234)
139 2p8j_A S-adenosylmethionine-de 89.4 0.34 1.1E-05 34.8 3.8 26 64-89 107-132 (209)
140 2nxc_A L11 mtase, ribosomal pr 89.4 0.72 2.5E-05 35.1 5.9 58 24-110 182-239 (254)
141 3f4k_A Putative methyltransfer 89.4 0.37 1.3E-05 35.8 4.1 26 65-90 130-155 (257)
142 2i62_A Nicotinamide N-methyltr 89.3 1.1 3.9E-05 33.1 6.8 71 63-137 176-261 (265)
143 1zx0_A Guanidinoacetate N-meth 89.0 0.13 4.4E-06 38.4 1.3 23 65-87 150-172 (236)
144 2oxt_A Nucleoside-2'-O-methylt 88.7 1.9 6.6E-05 33.4 8.0 65 24-107 138-207 (265)
145 2zfu_A Nucleomethylin, cerebra 88.7 0.77 2.6E-05 33.2 5.4 44 65-110 131-174 (215)
146 2kw5_A SLR1183 protein; struct 88.7 0.92 3.1E-05 32.4 5.7 25 64-88 110-134 (202)
147 1ve3_A Hypothetical protein PH 88.6 0.44 1.5E-05 34.5 4.0 45 24-88 101-145 (227)
148 2wa2_A Non-structural protein 88.6 2.4 8.2E-05 33.1 8.5 55 16-87 139-195 (276)
149 2xvm_A Tellurite resistance pr 88.4 0.62 2.1E-05 32.9 4.6 42 24-85 95-136 (199)
150 3dh0_A SAM dependent methyltra 88.2 0.76 2.6E-05 33.2 5.0 45 65-110 123-176 (219)
151 2h00_A Methyltransferase 10 do 87.9 0.73 2.5E-05 34.4 4.9 74 25-104 139-228 (254)
152 2pbf_A Protein-L-isoaspartate 87.8 0.14 4.7E-06 37.7 0.7 34 24-85 160-193 (227)
153 3d2l_A SAM-dependent methyltra 87.8 0.53 1.8E-05 34.4 4.0 23 65-87 117-139 (243)
154 3m70_A Tellurite resistance pr 87.5 0.66 2.2E-05 35.3 4.5 41 24-84 182-222 (286)
155 3dli_A Methyltransferase; PSI- 87.0 1.1 3.8E-05 33.0 5.4 23 65-87 120-142 (240)
156 2yxd_A Probable cobalt-precorr 87.0 0.54 1.8E-05 32.6 3.5 51 23-104 97-147 (183)
157 2b25_A Hypothetical protein; s 86.8 0.54 1.9E-05 37.0 3.7 34 24-84 185-218 (336)
158 2ex4_A Adrenal gland protein A 86.7 0.63 2.2E-05 34.4 3.9 45 65-110 165-220 (241)
159 3ocj_A Putative exported prote 86.6 0.85 2.9E-05 35.2 4.8 24 64-87 206-229 (305)
160 1ri5_A MRNA capping enzyme; me 86.6 0.61 2.1E-05 35.2 3.9 24 64-87 153-176 (298)
161 3cvo_A Methyltransferase-like 86.2 0.78 2.7E-05 34.7 4.2 49 25-102 121-169 (202)
162 4gua_A Non-structural polyprot 86.1 2 7E-05 37.9 7.2 78 21-110 216-294 (670)
163 1dl5_A Protein-L-isoaspartate 86.0 0.41 1.4E-05 37.6 2.7 36 24-87 142-177 (317)
164 3i9f_A Putative type 11 methyl 85.2 2.1 7.2E-05 29.5 5.9 44 65-111 92-144 (170)
165 3ujc_A Phosphoethanolamine N-m 85.1 0.87 3E-05 33.7 4.0 23 65-87 139-161 (266)
166 3sm3_A SAM-dependent methyltra 85.1 1.1 3.6E-05 32.4 4.3 24 65-88 121-144 (235)
167 3jwh_A HEN1; methyltransferase 85.0 1.8 6.2E-05 31.3 5.6 23 65-87 121-143 (217)
168 1r18_A Protein-L-isoaspartate( 84.9 0.15 5.2E-06 37.7 -0.4 36 24-87 161-196 (227)
169 4df3_A Fibrillarin-like rRNA/T 84.8 0.99 3.4E-05 34.8 4.3 38 24-85 145-182 (233)
170 3lbf_A Protein-L-isoaspartate 84.7 0.57 1.9E-05 33.8 2.7 37 23-87 140-176 (210)
171 1xtp_A LMAJ004091AAA; SGPP, st 84.6 0.92 3.2E-05 33.4 3.9 45 64-109 176-232 (254)
172 3eld_A Methyltransferase; flav 84.6 8.5 0.00029 31.0 9.8 89 23-134 144-233 (300)
173 2p35_A Trans-aconitate 2-methy 84.5 1.6 5.3E-05 32.3 5.1 23 65-87 112-134 (259)
174 3e8s_A Putative SAM dependent 84.2 3 0.0001 29.7 6.5 22 65-86 132-153 (227)
175 2g72_A Phenylethanolamine N-me 84.1 3.3 0.00011 31.4 7.0 71 63-137 193-280 (289)
176 3ufb_A Type I restriction-modi 84.0 0.79 2.7E-05 39.2 3.7 89 23-118 299-399 (530)
177 3iv6_A Putative Zn-dependent a 83.7 2.8 9.5E-05 32.6 6.5 42 24-86 108-149 (261)
178 1vbf_A 231AA long hypothetical 83.6 0.68 2.3E-05 33.9 2.8 37 24-88 132-168 (231)
179 1ne2_A Hypothetical protein TA 83.6 1.2 4.3E-05 31.8 4.1 53 25-104 109-161 (200)
180 3hem_A Cyclopropane-fatty-acyl 82.9 2.5 8.5E-05 32.4 5.8 27 64-90 162-188 (302)
181 3g89_A Ribosomal RNA small sub 82.7 1.6 5.4E-05 33.3 4.6 35 65-99 164-198 (249)
182 3k0b_A Predicted N6-adenine-sp 82.6 4.7 0.00016 33.0 7.7 56 15-86 296-351 (393)
183 2y1w_A Histone-arginine methyl 82.3 0.45 1.5E-05 38.1 1.4 52 24-95 114-167 (348)
184 2avn_A Ubiquinone/menaquinone 81.9 0.61 2.1E-05 35.1 1.9 25 64-88 131-155 (260)
185 1y8c_A S-adenosylmethionine-de 81.8 1.7 6E-05 31.5 4.4 23 64-86 121-143 (246)
186 2fk8_A Methoxy mycolic acid sy 81.6 2.3 8E-05 32.7 5.3 27 64-90 173-199 (318)
187 3ldg_A Putative uncharacterize 81.2 3.9 0.00013 33.5 6.8 55 15-85 289-343 (384)
188 3gu3_A Methyltransferase; alph 81.2 1.5 5.2E-05 33.4 4.0 23 65-87 106-128 (284)
189 1nkv_A Hypothetical protein YJ 81.2 1 3.5E-05 33.3 3.0 24 65-88 120-143 (256)
190 2oo3_A Protein involved in cat 81.1 4.6 0.00016 32.2 6.9 56 25-104 158-213 (283)
191 3ldu_A Putative methylase; str 81.0 5.1 0.00017 32.6 7.3 57 14-86 289-345 (385)
192 2h1r_A Dimethyladenosine trans 80.7 0.1 3.4E-06 41.3 -3.0 22 69-90 143-164 (299)
193 1fbn_A MJ fibrillarin homologu 80.4 1.2 4E-05 32.9 3.1 20 65-84 158-177 (230)
194 4htf_A S-adenosylmethionine-de 80.3 1.6 5.6E-05 33.0 3.9 22 65-86 153-174 (285)
195 3evf_A RNA-directed RNA polyme 80.0 14 0.00049 29.3 9.4 89 23-134 137-226 (277)
196 4fsd_A Arsenic methyltransfera 79.7 1.7 5.7E-05 35.0 4.0 22 65-86 183-204 (383)
197 3g07_A 7SK snRNA methylphospha 79.7 1.8 6E-05 33.4 3.9 26 62-87 197-222 (292)
198 1kpg_A CFA synthase;, cyclopro 79.6 2.8 9.6E-05 31.6 5.0 24 65-88 148-171 (287)
199 3fpf_A Mtnas, putative unchara 78.5 1.6 5.5E-05 35.0 3.5 44 16-85 179-222 (298)
200 3pfg_A N-methyltransferase; N, 78.4 1.5 5.2E-05 32.7 3.1 22 64-85 130-151 (263)
201 2gb4_A Thiopurine S-methyltran 78.1 2.3 7.9E-05 32.5 4.1 39 65-103 171-217 (252)
202 3ggd_A SAM-dependent methyltra 78.0 3.8 0.00013 30.0 5.3 24 65-88 143-166 (245)
203 3r0q_C Probable protein argini 77.5 0.76 2.6E-05 37.2 1.3 60 16-94 119-180 (376)
204 3cc8_A Putative methyltransfer 77.3 2.1 7.1E-05 30.7 3.5 22 66-87 111-132 (230)
205 3vc1_A Geranyl diphosphate 2-C 77.2 2 6.7E-05 33.3 3.5 26 64-89 200-225 (312)
206 1af7_A Chemotaxis receptor met 76.9 2.8 9.7E-05 32.7 4.4 22 63-84 230-251 (274)
207 2yxe_A Protein-L-isoaspartate 76.9 1.4 4.9E-05 31.7 2.5 36 24-87 144-179 (215)
208 3ccf_A Cyclopropane-fatty-acyl 76.8 1.8 6.2E-05 32.7 3.2 23 65-87 134-156 (279)
209 3dlc_A Putative S-adenosyl-L-m 76.3 2 6.7E-05 30.5 3.1 26 65-90 128-153 (219)
210 1jg1_A PIMT;, protein-L-isoasp 76.2 1.5 5.2E-05 32.4 2.5 18 70-87 174-191 (235)
211 2ip2_A Probable phenazine-spec 75.4 6.8 0.00023 30.3 6.3 24 65-88 252-275 (334)
212 1xxl_A YCGJ protein; structura 75.2 2.3 7.7E-05 31.4 3.3 23 65-87 104-126 (239)
213 2o57_A Putative sarcosine dime 75.2 1.7 5.7E-05 33.1 2.6 23 65-87 167-189 (297)
214 3mcz_A O-methyltransferase; ad 75.1 4.4 0.00015 31.6 5.1 26 64-89 266-291 (352)
215 2vdw_A Vaccinia virus capping 74.8 1.2 4E-05 35.1 1.7 23 65-87 149-171 (302)
216 3dp7_A SAM-dependent methyltra 74.5 9 0.00031 30.3 6.9 26 65-90 267-292 (363)
217 3lst_A CALO1 methyltransferase 73.8 7.7 0.00026 30.4 6.3 24 65-88 266-289 (348)
218 3gwz_A MMCR; methyltransferase 73.7 9.2 0.00032 30.4 6.8 26 65-90 287-312 (369)
219 3bzb_A Uncharacterized protein 72.7 11 0.00037 28.8 6.8 26 64-89 179-209 (281)
220 3thr_A Glycine N-methyltransfe 72.4 1.8 6.3E-05 32.7 2.2 24 64-87 154-177 (293)
221 3i53_A O-methyltransferase; CO 72.1 10 0.00034 29.4 6.5 26 64-89 253-278 (332)
222 3bxo_A N,N-dimethyltransferase 71.3 2.4 8.1E-05 30.7 2.5 25 64-88 120-144 (239)
223 2r3s_A Uncharacterized protein 71.2 6.5 0.00022 30.2 5.2 26 64-89 250-275 (335)
224 3sso_A Methyltransferase; macr 70.9 3.7 0.00013 34.6 3.9 24 64-87 303-326 (419)
225 1g6q_1 HnRNP arginine N-methyl 70.0 1.4 4.8E-05 34.8 1.1 46 25-89 104-149 (328)
226 1qzz_A RDMB, aclacinomycin-10- 69.6 9.1 0.00031 30.0 5.8 22 65-86 267-288 (374)
227 2fyt_A Protein arginine N-meth 69.2 2 6.7E-05 34.3 1.8 31 65-95 151-183 (340)
228 1vlm_A SAM-dependent methyltra 69.0 12 0.00041 26.9 6.0 23 65-87 119-141 (219)
229 1pjz_A Thiopurine S-methyltran 67.3 3.6 0.00012 29.8 2.8 25 65-89 120-144 (203)
230 3b3j_A Histone-arginine methyl 66.9 1.1 3.7E-05 37.9 -0.2 46 24-89 222-267 (480)
231 3mgg_A Methyltransferase; NYSG 66.4 4.3 0.00015 30.3 3.2 20 66-85 123-142 (276)
232 3g2m_A PCZA361.24; SAM-depende 65.3 2.9 0.0001 31.9 2.0 27 64-90 169-195 (299)
233 1tw3_A COMT, carminomycin 4-O- 64.7 7.6 0.00026 30.4 4.4 23 65-87 268-290 (360)
234 3q7e_A Protein arginine N-meth 63.8 1.9 6.3E-05 34.5 0.6 47 24-89 131-177 (349)
235 2hlg_A Fruit-specific protein; 63.5 2 6.8E-05 24.2 0.6 13 77-90 27-39 (39)
236 1zq9_A Probable dimethyladenos 63.5 1.3 4.4E-05 34.4 -0.3 53 26-89 93-150 (285)
237 3m33_A Uncharacterized protein 63.2 0.69 2.3E-05 34.1 -1.9 36 65-104 122-157 (226)
238 3bkw_A MLL3908 protein, S-aden 62.9 3.1 0.0001 30.2 1.7 21 65-85 124-144 (243)
239 3ps9_A TRNA 5-methylaminomethy 62.9 7.2 0.00024 33.6 4.2 54 25-104 178-231 (676)
240 2gs9_A Hypothetical protein TT 62.4 3.2 0.00011 29.6 1.7 23 65-87 112-134 (211)
241 3opn_A Putative hemolysin; str 61.3 6.9 0.00024 29.4 3.5 21 65-85 117-137 (232)
242 3g5l_A Putative S-adenosylmeth 61.2 3.4 0.00012 30.4 1.7 23 65-87 125-147 (253)
243 3hp7_A Hemolysin, putative; st 60.8 7.1 0.00024 30.9 3.6 20 65-84 165-184 (291)
244 2ld4_A Anamorsin; methyltransf 60.6 3.4 0.00012 28.8 1.5 20 65-84 81-100 (176)
245 3v97_A Ribosomal RNA large sub 59.3 16 0.00054 32.2 5.9 44 26-84 303-346 (703)
246 3p2e_A 16S rRNA methylase; met 58.9 6.8 0.00023 29.1 3.0 22 64-85 118-139 (225)
247 3gcz_A Polyprotein; flavivirus 58.6 39 0.0013 26.8 7.5 45 23-84 153-200 (282)
248 4gek_A TRNA (CMO5U34)-methyltr 58.1 4.1 0.00014 31.2 1.7 23 65-87 158-180 (261)
249 2qe6_A Uncharacterized protein 58.0 7.4 0.00025 29.9 3.1 25 64-88 175-199 (274)
250 1hru_A YRDC gene product; prot 57.6 12 0.00039 27.5 4.0 40 63-102 5-48 (188)
251 3uwp_A Histone-lysine N-methyl 57.5 8.8 0.0003 32.5 3.7 18 68-85 271-288 (438)
252 2p7i_A Hypothetical protein; p 56.9 4.4 0.00015 29.2 1.6 23 65-87 120-143 (250)
253 4hg2_A Methyltransferase type 56.4 4.7 0.00016 30.9 1.7 25 66-90 116-140 (257)
254 3pvc_A TRNA 5-methylaminomethy 56.3 11 0.00039 32.5 4.4 54 25-104 170-223 (689)
255 3l8d_A Methyltransferase; stru 55.9 5.8 0.0002 28.7 2.1 24 65-88 133-156 (242)
256 3bkx_A SAM-dependent methyltra 55.0 24 0.00081 26.0 5.5 23 67-89 141-163 (275)
257 3kr9_A SAM-dependent methyltra 54.9 22 0.00075 26.9 5.3 40 65-110 99-138 (225)
258 3giw_A Protein of unknown func 53.9 13 0.00045 29.3 4.0 24 65-88 180-203 (277)
259 3bgv_A MRNA CAP guanine-N7 met 53.8 6.3 0.00022 30.2 2.1 23 65-87 135-157 (313)
260 3mq2_A 16S rRNA methyltransfer 53.0 5.3 0.00018 28.7 1.5 22 64-85 119-140 (218)
261 2aot_A HMT, histamine N-methyl 51.1 6.7 0.00023 29.8 1.9 23 65-87 152-174 (292)
262 1wzn_A SAM-dependent methyltra 51.0 7.8 0.00027 28.3 2.2 22 64-85 124-145 (252)
263 3bus_A REBM, methyltransferase 50.6 6.3 0.00022 29.2 1.6 24 65-88 146-169 (273)
264 1k7j_A Protein YCIO, protein T 50.1 10 0.00035 28.3 2.7 38 65-102 14-55 (206)
265 2px2_A Genome polyprotein [con 49.8 23 0.00078 28.1 4.8 39 24-79 137-176 (269)
266 3g5t_A Trans-aconitate 3-methy 48.6 5.9 0.0002 30.2 1.2 23 65-87 129-151 (299)
267 3tka_A Ribosomal RNA small sub 47.1 7.1 0.00024 32.1 1.5 37 65-104 254-290 (347)
268 1wg8_A Predicted S-adenosylmet 47.0 7.2 0.00025 31.1 1.5 36 65-103 213-248 (285)
269 1vl5_A Unknown conserved prote 47.0 7.9 0.00027 28.6 1.7 22 65-86 120-141 (260)
270 4hhu_A OR280; engineered prote 46.2 17 0.00056 26.0 3.1 40 36-84 79-118 (170)
271 1x19_A CRTF-related protein; m 45.2 18 0.00062 28.3 3.6 26 63-88 273-298 (359)
272 2hjs_A USG-1 protein homolog; 45.0 67 0.0023 25.5 7.0 58 78-137 244-302 (340)
273 2km1_A Protein DRE2; yeast, an 44.2 30 0.001 24.6 4.3 42 22-83 55-96 (136)
274 3reo_A (ISO)eugenol O-methyltr 44.1 17 0.0006 28.8 3.4 25 65-89 280-304 (368)
275 2wk1_A NOVP; transferase, O-me 44.1 25 0.00086 27.6 4.2 40 65-105 224-263 (282)
276 1jcu_A Conserved protein MTH16 43.6 13 0.00043 27.9 2.3 38 65-102 13-54 (208)
277 2yqz_A Hypothetical protein TT 42.2 10 0.00036 27.6 1.7 20 65-84 121-140 (263)
278 2rbg_A Putative uncharacterize 42.0 40 0.0014 23.6 4.5 44 50-106 68-111 (126)
279 3j21_M 50S ribosomal protein L 40.5 7.1 0.00024 29.6 0.5 25 26-53 127-151 (194)
280 3jyw_L 60S ribosomal protein L 40.4 14 0.00046 28.0 2.0 25 25-52 127-151 (192)
281 3dmg_A Probable ribosomal RNA 39.3 17 0.0006 29.4 2.7 53 24-103 99-151 (381)
282 3p9c_A Caffeic acid O-methyltr 39.0 20 0.00068 28.4 3.0 25 65-89 278-302 (364)
283 1m6y_A S-adenosyl-methyltransf 38.9 11 0.00037 29.8 1.4 41 65-108 225-265 (301)
284 2eqa_A Hypothetical protein ST 37.9 24 0.00081 28.8 3.2 38 65-102 14-55 (352)
285 4a6d_A Hydroxyindole O-methylt 37.8 28 0.00096 27.4 3.6 25 65-89 263-287 (353)
286 1m6y_A S-adenosyl-methyltransf 37.5 12 0.00039 29.6 1.3 14 25-38 97-110 (301)
287 1p91_A Ribosomal RNA large sub 37.3 10 0.00036 28.1 1.0 20 68-87 161-180 (269)
288 1fp2_A Isoflavone O-methyltran 36.0 50 0.0017 25.6 4.8 24 65-88 265-291 (352)
289 2r00_A Aspartate-semialdehyde 35.1 82 0.0028 24.9 6.0 57 78-136 242-299 (336)
290 1zg3_A Isoflavanone 4'-O-methy 34.2 52 0.0018 25.6 4.7 24 65-88 270-296 (358)
291 3ege_A Putative methyltransfer 34.1 25 0.00085 26.0 2.6 22 65-87 111-132 (261)
292 1ffk_I Ribosomal protein L15E; 33.7 16 0.00053 27.7 1.4 25 26-53 128-152 (194)
293 4e2x_A TCAB9; kijanose, tetron 33.1 17 0.00058 29.0 1.7 23 64-86 187-209 (416)
294 4hc4_A Protein arginine N-meth 32.2 15 0.0005 30.1 1.1 30 66-95 170-201 (376)
295 3iz5_P 60S ribosomal protein L 32.1 18 0.00062 27.5 1.5 24 26-52 129-152 (204)
296 1vq8_M 50S ribosomal protein L 31.6 15 0.00053 27.7 1.1 24 26-52 128-151 (194)
297 4a17_L RPL15, ribosomal protei 31.3 14 0.00047 28.2 0.8 24 26-52 129-152 (204)
298 3b5i_A S-adenosyl-L-methionine 30.7 31 0.0011 28.2 2.9 28 61-88 201-228 (374)
299 3r24_A NSP16, 2'-O-methyl tran 30.4 63 0.0022 26.4 4.5 67 24-104 167-233 (344)
300 3lec_A NADB-rossmann superfami 29.7 96 0.0033 23.4 5.4 40 65-110 105-144 (230)
301 1fp1_D Isoliquiritigenin 2'-O- 29.0 21 0.00071 28.2 1.5 22 65-86 286-307 (372)
302 1m6e_X S-adenosyl-L-methionnin 27.8 67 0.0023 26.0 4.4 31 58-88 182-212 (359)
303 3g7u_A Cytosine-specific methy 27.5 86 0.0029 25.3 5.0 22 24-45 69-90 (376)
304 1yub_A Ermam, rRNA methyltrans 26.1 3.8 0.00013 30.6 -3.2 17 69-85 129-145 (245)
305 4ay7_A Methylcobalamin\: coenz 26.0 64 0.0022 25.4 3.9 28 76-103 315-342 (348)
306 2b0j_A 5,10-methenyltetrahydro 25.8 50 0.0017 27.0 3.2 37 62-103 153-189 (358)
307 3o3m_B Beta subunit 2-hydroxya 25.7 37 0.0013 27.4 2.5 22 70-91 18-40 (385)
308 4dzz_A Plasmid partitioning pr 25.0 32 0.0011 24.0 1.8 14 25-38 74-87 (206)
309 4az3_B Lysosomal protective pr 24.7 20 0.00068 25.2 0.6 10 32-41 1-10 (155)
310 1g55_A DNA cytosine methyltran 24.7 29 0.00099 27.6 1.6 20 26-45 68-87 (343)
311 3htx_A HEN1; HEN1, small RNA m 24.0 1.5E+02 0.005 27.6 6.2 22 65-87 815-836 (950)
312 1j93_A UROD, uroporphyrinogen 23.1 73 0.0025 25.0 3.7 30 74-103 318-347 (353)
313 2dpm_A M.dpnii 1, protein (ade 23.1 2.1E+02 0.0071 22.0 6.3 12 27-38 188-199 (284)
314 3kjh_A CO dehydrogenase/acetyl 22.6 32 0.0011 24.6 1.4 13 25-37 130-142 (254)
315 3ttc_A HYPF, transcriptional r 22.2 70 0.0024 28.3 3.7 38 65-102 111-152 (657)
316 2ph1_A Nucleotide-binding prot 21.6 39 0.0013 25.1 1.7 13 25-37 127-139 (262)
317 3l7v_A Putative uncharacterize 21.6 51 0.0017 26.3 2.4 37 66-102 44-83 (295)
318 3iqw_A Tail-anchored protein t 21.6 28 0.00094 27.7 0.9 14 25-38 137-150 (334)
319 1gwm_A NCP1, non-catalytic pro 21.0 41 0.0014 23.9 1.6 19 24-42 107-126 (153)
320 2xdq_A Light-independent proto 20.8 49 0.0017 27.1 2.3 40 65-104 86-127 (460)
321 1r3s_A URO-D, uroporphyrinogen 20.7 1.4E+02 0.0048 23.5 5.0 27 77-103 330-356 (367)
322 3aek_B Light-independent proto 20.3 72 0.0025 27.0 3.3 40 63-102 72-112 (525)
323 1u2z_A Histone-lysine N-methyl 20.1 56 0.0019 27.2 2.5 19 66-84 340-358 (433)
324 2efj_A 3,7-dimethylxanthine me 20.1 65 0.0022 26.4 2.9 29 61-89 201-229 (384)
No 1
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=3.8e-37 Score=256.66 Aligned_cols=114 Identities=19% Similarity=0.362 Sum_probs=99.0
Q ss_pred CCCCcCEEEEcCCCCCc--cccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHH
Q psy15213 23 KNKYFDRILADLPCTGS--GVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIF 100 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~--G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~ 100 (139)
..+.||+|||||||||+ |+++++|+++|.++++++..++.+|++||.+|+++|||||+|||||||++|+|||+||++|
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~ 299 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGA 299 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHH
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHH
Confidence 35789999999999997 7889999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCcEEec-----CC-------------------CcccCCCCCCCCCCcEEEEEEEecC
Q psy15213 101 SKNHKDSIRLN-----SP-------------------GQLLPTVNKKQDYDGFFYSLFQKRK 138 (139)
Q Consensus 101 l~~~~~~~~~~-----~~-------------------~~~~P~~~~~~~~~GfFia~l~k~~ 138 (139)
|++++++..++ ++ .+++|+. ..+++|||+|+|+|.+
T Consensus 300 L~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~r~~P~~--~~~~gGFFiA~L~KvS 359 (359)
T 4fzv_A 300 IELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNL--MANFGPMYFCKMRRLT 359 (359)
T ss_dssp HHHHHHHHCCCEEECCCHHHHHHHTTTCEECTTCSSSEEEECBT--TBCCCCEEEEEEEECC
T ss_pred HHhCCCCcccccccccccccccccccccccCccccceEEECCCC--CCCCCCEEEEEEEECC
Confidence 99876532211 10 2678876 2467889999999975
No 2
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=1.9e-33 Score=240.39 Aligned_cols=111 Identities=28% Similarity=0.436 Sum_probs=103.8
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
.+.||+||+||||||+|+++++|+++|.++++++..++..|+++|.+|+++|||||+|||||||++++|||+||+++|++
T Consensus 173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~ 252 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVEN 252 (456)
T ss_dssp TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEecCC---------------------CcccCCCCCCCCCCcEEEEEEEecC
Q psy15213 104 HKDSIRLNSP---------------------GQLLPTVNKKQDYDGFFYSLFQKRK 138 (139)
Q Consensus 104 ~~~~~~~~~~---------------------~~~~P~~~~~~~~~GfFia~l~k~~ 138 (139)
++ +++++++ .+++||. +++||||+|+|+|.+
T Consensus 253 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~---~~~dGFF~A~l~k~~ 304 (456)
T 3m4x_A 253 YP-VTIEEIPLTQSVSSGRSEWGSVAGLEKTIRIWPHK---DQGEGHFVAKLTFHG 304 (456)
T ss_dssp SS-EEEECCCCSSCCEECCGGGSSSTTGGGSEEECTTT---SSSSCEEEEEEEECS
T ss_pred CC-CEEEeccccccccccccccccccccCCeEEECCCC---CCCcCeEEEEEEECC
Confidence 98 8877642 2689988 999999999999965
No 3
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=7.6e-33 Score=237.24 Aligned_cols=112 Identities=28% Similarity=0.516 Sum_probs=105.1
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
.+.||+||+||||||+|+++++|+++|.++++++..++..|+++|.+|+++|||||+|||||||++++|||++|+++|++
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~ 247 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKA 247 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEecCC----------------------CcccCCCCCCCCCCcEEEEEEEecC
Q psy15213 104 HKDSIRLNSP----------------------GQLLPTVNKKQDYDGFFYSLFQKRK 138 (139)
Q Consensus 104 ~~~~~~~~~~----------------------~~~~P~~~~~~~~~GfFia~l~k~~ 138 (139)
++++++++++ .+++|+. +++||||+|+|+|.+
T Consensus 248 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~---~~~dGfF~A~l~k~~ 301 (464)
T 3m6w_A 248 HPEFRLEDARLHPLFAPGVPEWGEGNPELLKTARLWPHR---LEGEGHFLARFRKEG 301 (464)
T ss_dssp CTTEEEECCCCSTTSEECCGGGTTTCGGGGGSEEECTTT---SSSSCEEEEEEEECS
T ss_pred CCCcEEEecccccccccCcccccccccccCCeEEECCCC---CCceeEEEEEEEECC
Confidence 9998877642 2688988 999999999999974
No 4
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.98 E-value=3.6e-33 Score=227.78 Aligned_cols=110 Identities=21% Similarity=0.273 Sum_probs=84.5
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCcc--CCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHh
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWL--RRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSK 102 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~--~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~ 102 (139)
..||+||+||||||+|+++++|+.+|. ++++++..++.+|++||.+|+++++ ||+|||||||++++|||+||+++|+
T Consensus 173 ~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~ 251 (309)
T 2b9e_A 173 HEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQ 251 (309)
T ss_dssp TTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHT
T ss_pred CCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHH
Confidence 479999999999999999999999885 4678999999999999999999997 9999999999999999999999999
Q ss_pred hCCC-cEEecCC-----------------CcccCCCCCCCCCCcEEEEEEEecC
Q psy15213 103 NHKD-SIRLNSP-----------------GQLLPTVNKKQDYDGFFYSLFQKRK 138 (139)
Q Consensus 103 ~~~~-~~~~~~~-----------------~~~~P~~~~~~~~~GfFia~l~k~~ 138 (139)
++++ +++++.. .+++|+. +++||||+|+|+|.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~---~~~dGfF~A~l~k~~ 302 (309)
T 2b9e_A 252 QNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPET---TLSSGFFVAVIERVE 302 (309)
T ss_dssp TSTTTEEECCCCTTCCCBCCSSSTTGGGSEEECHHH---HSSCSEEEEEEEEC-
T ss_pred hCCCcEEEeccccccccccccccCCCCCeEEECCCC---CCCCCeEEEEEEECC
Confidence 9998 8776531 2567876 899999999999975
No 5
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.97 E-value=2.6e-31 Score=227.95 Aligned_cols=112 Identities=29% Similarity=0.569 Sum_probs=102.7
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
.+.||+||+||||||+|+++++|+++|.|+++++..++..|+++|.+|+++|||||+|||||||++++|||+||+++|++
T Consensus 185 ~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~ 264 (479)
T 2frx_A 185 PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKET 264 (479)
T ss_dssp TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHH
T ss_pred cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCc-EEecCC---------------CcccCCCCCCCCCCcEEEEEEEecC
Q psy15213 104 HKDS-IRLNSP---------------GQLLPTVNKKQDYDGFFYSLFQKRK 138 (139)
Q Consensus 104 ~~~~-~~~~~~---------------~~~~P~~~~~~~~~GfFia~l~k~~ 138 (139)
++++ ++.+.. .+++||. +++||||+|+|+|.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~g~~r~~P~~---~~~dGfF~A~l~k~~ 312 (479)
T 2frx_A 265 YPDAVEFLPLGDLFPGANKALTEEGFLHVFPQI---YDCEGFFVARLRKTQ 312 (479)
T ss_dssp STTTEEECCCTTSSTTGGGGBCTTSCEEECTTT---TTSCCEEEEEEEECS
T ss_pred CCCceecccccccccccccccccCCeEEECCCC---CCcCccEEEEEEEcC
Confidence 9886 443321 2679988 899999999999975
No 6
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.97 E-value=2.1e-31 Score=224.10 Aligned_cols=118 Identities=40% Similarity=0.740 Sum_probs=106.6
Q ss_pred ccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHH
Q psy15213 17 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQ 96 (139)
Q Consensus 17 ~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~v 96 (139)
+...|+..+.||+||+||||||+|+++++|+++|.+++.++..++..|.++|.+++++|||||+|||||||++++|||++
T Consensus 306 ~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~ 385 (429)
T 1sqg_A 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 (429)
T ss_dssp CTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHH
T ss_pred hchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHH
Confidence 33333445689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCcEEecC------CCcccCCCCCCCCCCcEEEEEEEec
Q psy15213 97 AIIFSKNHKDSIRLNS------PGQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 97 V~~~l~~~~~~~~~~~------~~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
|.++|++++++++++. ..+++|+. +++||||+|+|+|.
T Consensus 386 v~~~l~~~~~~~~~~~~~~~~~~~~~~P~~---~~~dGff~a~l~k~ 429 (429)
T 1sqg_A 386 IKAFLQRTADAELCETGTPEQPGKQNLPGA---EEGDGFFYAKLIKK 429 (429)
T ss_dssp HHHHHHHCTTCEECSSBCSSSBSEEECCCT---TSCCSEEEEEEEC-
T ss_pred HHHHHHhCCCCEEeCCCCCCCCeEEECCCC---CCCCceEEEEEEEC
Confidence 9999999999988761 14789998 99999999999984
No 7
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.97 E-value=2.9e-31 Score=224.81 Aligned_cols=113 Identities=33% Similarity=0.645 Sum_probs=104.8
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHh
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSK 102 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~ 102 (139)
..+.||+||+||||||+|+++++|+++|.++++++..++..|.++|.++.++|||||+|||+|||++++|||++|+++|+
T Consensus 327 ~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~ 406 (450)
T 2yxl_A 327 GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLN 406 (450)
T ss_dssp CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHH
T ss_pred ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHH
Confidence 33679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcEEecCC-----------CcccCCCCCCCCCCcEEEEEEEecC
Q psy15213 103 NHKDSIRLNSP-----------GQLLPTVNKKQDYDGFFYSLFQKRK 138 (139)
Q Consensus 103 ~~~~~~~~~~~-----------~~~~P~~~~~~~~~GfFia~l~k~~ 138 (139)
+++++++.++. .+++|+. +++||||+|+|+|++
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~---~~~dGff~a~l~k~~ 450 (450)
T 2yxl_A 407 VHPEFKLVPLKSPYDPGFLEGTMRAWPHR---HSTIGFFYALLEKSK 450 (450)
T ss_dssp HCSSCEECCCCSSSEECSSTTCEEECHHH---HSSCCEEEEEEECC-
T ss_pred hCCCCEEeecccccccccCCCeEEECCCC---CCCCceEEEEEEECC
Confidence 99999887653 3688987 899999999999864
No 8
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.97 E-value=1.6e-30 Score=211.22 Aligned_cols=110 Identities=39% Similarity=0.602 Sum_probs=93.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
.+.||+|++||||||+|+++++|+++|.++.+++..+...|.++|.++.++|||||+|||||||++++|||++|+++|++
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~ 264 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDN 264 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhc
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCcEEecCC---------------------CcccCCCCCCCCCCcEEEEEEEec
Q psy15213 104 HKDSIRLNSP---------------------GQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 104 ~~~~~~~~~~---------------------~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
+ ++++++++ .+++||. +++||||+|+|+|.
T Consensus 265 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~---~~~dGfF~A~l~k~ 315 (315)
T 1ixk_A 265 F-DVELLPLKYGEPALTNPFGIELSEEIKNARRLYPDV---HETSGFFIAKIRKL 315 (315)
T ss_dssp S-SEEEECCCSSEECCSSGGGCCCCGGGGGSEEECTTT---SSSCSEEEEEEEEC
T ss_pred C-CCEEecCCccccCcccccccccccccCCEEEECCCC---CCcccEEEEEEEEC
Confidence 6 47665543 2578887 99999999999984
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.94 E-value=2.3e-27 Score=188.47 Aligned_cols=104 Identities=28% Similarity=0.435 Sum_probs=82.7
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
.+.||+|++||||||.|+++|+| .++.+++.++...|.++|.++.++|||||+|||+|||++++|||++|+++|++
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p----~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~ 229 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNR----NVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQK 229 (274)
T ss_dssp TCCEEEEEEEECCC----------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHH
T ss_pred cccCCEEEEcCCCCCCcccccCC----CCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHh
Confidence 46899999999999999999998 56788899999999999999999999999999999999999999999999999
Q ss_pred CCCcEEecCC-----------------CcccCCCCCCCCCCcEEEEEEEec
Q psy15213 104 HKDSIRLNSP-----------------GQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 104 ~~~~~~~~~~-----------------~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
++++++++.+ .+++||. + + ||+|+|+|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~---~--~-ff~a~l~k~ 274 (274)
T 3ajd_A 230 RNDVELIIIKANEFKGINIKEGYIKGTLRVFPPN---E--P-FFIAKLRKI 274 (274)
T ss_dssp CSSEEEECCCSTTCTTSCEEECSSTTCEEECTTS---C--C-EEEEEEEEC
T ss_pred CCCcEEecCccccccCcccccccCCCeEEECCCC---C--C-EEEEEEEEC
Confidence 9998876643 2578875 4 3 999999984
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.82 E-value=3.8e-09 Score=88.32 Aligned_cols=65 Identities=18% Similarity=0.370 Sum_probs=55.9
Q ss_pred CcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccH--HHHHHHHhh
Q psy15213 26 YFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESE--EQAIIFSKN 103 (139)
Q Consensus 26 ~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE--~vV~~~l~~ 103 (139)
.||.|++|||| +..+...+....+.+.+++..|+++|+|||.|+|+|||..+.+++ ++|...+.+
T Consensus 280 ~fD~Ii~dpP~-------------f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~ 346 (393)
T 4dmg_A 280 PFHHVLLDPPT-------------LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAAD 346 (393)
T ss_dssp CEEEEEECCCC-------------CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCc-------------CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 49999999996 334556788899999999999999999999999999999998887 677776653
No 11
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.65 E-value=3.3e-08 Score=81.46 Aligned_cols=74 Identities=22% Similarity=0.280 Sum_probs=57.7
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCcccc--HHHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEES--EEQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~EN--E~vV~~~l 101 (139)
...||.|++|||+.+ .++..+....+.+.+++..++++|+|||.|+++||+....++ ++.+...+
T Consensus 277 ~~~fD~Ii~dpP~~~-------------~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~ 343 (382)
T 1wxx_A 277 GERFDLVVLDPPAFA-------------KGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAA 343 (382)
T ss_dssp TCCEEEEEECCCCSC-------------CSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCeeEEEECCCCCC-------------CChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 468999999999543 344567788899999999999999999999999999988775 56666544
Q ss_pred -hhCCCcEEe
Q psy15213 102 -KNHKDSIRL 110 (139)
Q Consensus 102 -~~~~~~~~~ 110 (139)
+....++.+
T Consensus 344 ~~~g~~~~~i 353 (382)
T 1wxx_A 344 QDAHRLLRVV 353 (382)
T ss_dssp HHTTCCEEEE
T ss_pred HHcCCeEEEE
Confidence 444455544
No 12
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.48 E-value=2.1e-07 Score=76.73 Aligned_cols=75 Identities=20% Similarity=0.267 Sum_probs=57.1
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccc--cHHHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEE--SEEQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~E--NE~vV~~~l 101 (139)
...||.|++|||+ +..+...+......+.+++..++++|+|||.|+|+||+.+..+ .++++....
T Consensus 287 ~~~fD~Vi~dpP~-------------~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~ 353 (396)
T 2as0_A 287 GEKFDIVVLDPPA-------------FVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAG 353 (396)
T ss_dssp TCCEEEEEECCCC-------------SCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHH
Confidence 4689999999994 3344567778888999999999999999999999999987655 456666555
Q ss_pred hhC-CCcEEec
Q psy15213 102 KNH-KDSIRLN 111 (139)
Q Consensus 102 ~~~-~~~~~~~ 111 (139)
... ..++.+.
T Consensus 354 ~~~~~~~~~i~ 364 (396)
T 2as0_A 354 AKAGKFLKMLE 364 (396)
T ss_dssp HHTTEEEEESS
T ss_pred HHcCCeEEEEe
Confidence 443 3344443
No 13
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.37 E-value=1.7e-07 Score=75.03 Aligned_cols=88 Identities=14% Similarity=0.002 Sum_probs=60.3
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccC--CCccccHHHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS--LWFEESEEQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS--~~~~ENE~vV~~~l 101 (139)
.+.||.|++|+|+.+.|.. ..-.+.+++..+.+.|+|||.+++.+|+ +.+++...+++.+.
T Consensus 161 ~~~fD~Ii~d~~~~~~~~~-----------------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~ 223 (296)
T 1inl_A 161 KNEFDVIIIDSTDPTAGQG-----------------GHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRIS 223 (296)
T ss_dssp SSCEEEEEEEC---------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHH
T ss_pred CCCceEEEEcCCCcccCch-----------------hhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHH
Confidence 3679999999996422210 0013467888999999999999999998 56788888888888
Q ss_pred hhCCCcEEecCCCcccCCCCCCCCCCcEEEEE
Q psy15213 102 KNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 133 (139)
Q Consensus 102 ~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~ 133 (139)
+.++.+.........+| .+..||++|.
T Consensus 224 ~~F~~v~~~~~~vp~~p-----~g~~~f~~as 250 (296)
T 1inl_A 224 KVFPITRVYLGFMTTYP-----SGMWSYTFAS 250 (296)
T ss_dssp HHCSEEEEEEEECTTST-----TSEEEEEEEE
T ss_pred HHCCceEEEEeecCccC-----CCceEEEEec
Confidence 88876654432223455 4678898885
No 14
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.34 E-value=1.9e-07 Score=83.19 Aligned_cols=78 Identities=17% Similarity=0.265 Sum_probs=53.6
Q ss_pred cccccCcccccc--CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 11 INKKTNNRFRFY--KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 11 ~~~~~~~~~~~~--~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
+.-...|...|. ..+.||.|++||||.+.+.- ..++....+.+.+++..+.++|+|||+|++|||+-
T Consensus 592 v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~-----------~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 592 HRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR-----------MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp EEEEESCHHHHHHHCCCCEEEEEECCCSBC------------------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred eEEEecCHHHHHHhcCCCccEEEECCccccCCcc-----------chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 334445555542 24689999999998654321 11223456788999999999999999999999997
Q ss_pred CccccHHHHHH
Q psy15213 89 WFEESEEQAII 99 (139)
Q Consensus 89 ~~~ENE~vV~~ 99 (139)
....+++....
T Consensus 661 ~~~~~~~~l~~ 671 (703)
T 3v97_A 661 GFRMDLDGLAK 671 (703)
T ss_dssp TCCCCHHHHHH
T ss_pred ccccCHHHHHH
Confidence 77777655443
No 15
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.26 E-value=3.1e-07 Score=75.81 Aligned_cols=74 Identities=19% Similarity=0.135 Sum_probs=53.0
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCcc--ccHHHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE--ESEEQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~--ENE~vV~~~l 101 (139)
...||.|++|||+.+.+. ..+....+.+.+++..++++|+|||+|++|+|+.... ++++++...+
T Consensus 291 ~~~fD~Ii~dpP~~~~~~-------------~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~ 357 (396)
T 3c0k_A 291 GEKFDVIVMDPPKFVENK-------------SQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAA 357 (396)
T ss_dssp TCCEEEEEECCSSTTTCS-------------SSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCh-------------hHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHH
Confidence 468999999999654321 1122233457889999999999999999999998866 6678887554
Q ss_pred h-hCCCcEEe
Q psy15213 102 K-NHKDSIRL 110 (139)
Q Consensus 102 ~-~~~~~~~~ 110 (139)
. ....++.+
T Consensus 358 ~~~g~~~~~i 367 (396)
T 3c0k_A 358 IDAGRDVQFI 367 (396)
T ss_dssp HHHTCCEEEE
T ss_pred HHcCCeEEEE
Confidence 4 44445443
No 16
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.14 E-value=2.9e-07 Score=76.55 Aligned_cols=83 Identities=17% Similarity=0.090 Sum_probs=54.7
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
..||.|++||||+. .++|..|++.+|+|| ++|.||+-....+.......+.++
T Consensus 130 ~~fD~I~lDP~~~~--------------------------~~~l~~a~~~lk~gG-~l~vt~td~~~l~~~~~~~~~~~y 182 (378)
T 2dul_A 130 RYFHFIDLDPFGSP--------------------------MEFLDTALRSAKRRG-ILGVTATDGAPLCGAHPRACLRKY 182 (378)
T ss_dssp TCEEEEEECCSSCC--------------------------HHHHHHHHHHEEEEE-EEEEEECCHHHHTTSSHHHHHHHH
T ss_pred CCCCEEEeCCCCCH--------------------------HHHHHHHHHhcCCCC-EEEEEeecchhhccccHHHHHHHc
Confidence 57999999999762 378999999999999 789999866644333344444443
Q ss_pred CCcE-EecC--------------------CCcccCCCCCCCCCCcEEEEEEEec
Q psy15213 105 KDSI-RLNS--------------------PGQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 105 ~~~~-~~~~--------------------~~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
...- ..+. ...+.|.. ...+|||++++.|.
T Consensus 183 g~~p~~~~~~~e~~~ri~l~~~~~~~~~~g~~i~P~~---~~~~~~y~rv~vrv 233 (378)
T 2dul_A 183 LAVPLRGELCHEVGTRILVGVIARYAAKYDLGIDVIL---AYYKDHYFRAFVKL 233 (378)
T ss_dssp SSBCCCSTTHHHHHHHHHHHHHHHHHHTTTEEEEEEE---EEEETTEEEEEEEE
T ss_pred cCCCcccccccchhHHHHHHHHHHhcCcCCcEEEEEE---EEecCCEEEEEEEE
Confidence 2110 0000 02455544 45679999999864
No 17
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.11 E-value=4.2e-06 Score=62.63 Aligned_cols=81 Identities=15% Similarity=0.135 Sum_probs=52.5
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCc--------cccHHH
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF--------EESEEQ 96 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~--------~ENE~v 96 (139)
..||.|++|++++ ....++..+.++|+|||.++.....+.. .++...
T Consensus 132 ~~fD~v~~d~~~~-------------------------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~ 186 (223)
T 3duw_A 132 EPFDFIFIDADKQ-------------------------NNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQG 186 (223)
T ss_dssp CCCSEEEECSCGG-------------------------GHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHH
T ss_pred CCcCEEEEcCCcH-------------------------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHH
Confidence 5799999998832 1246788899999999999987766541 222333
Q ss_pred HHHH---HhhCCCcEEecCCCcccCCCCCCCCCCcEEEEEEEe
Q psy15213 97 AIIF---SKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQK 136 (139)
Q Consensus 97 V~~~---l~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~l~k 136 (139)
+..+ +..++.+...-+| ++ .. .++|||++|+++|
T Consensus 187 ~~~~~~~l~~~~~~~~~~~p--~~-~~---~~~dG~~~~~~~~ 223 (223)
T 3duw_A 187 IRRFYELIAAEPRVSATALQ--TV-GS---KGYDGFIMAVVKE 223 (223)
T ss_dssp HHHHHHHHHHCTTEEEEEEE--EE-ET---TEEEEEEEEEEC-
T ss_pred HHHHHHHHhhCCCeEEEEEe--cc-CC---CCCCeeEEEEEeC
Confidence 4444 3446666543222 11 12 5689999999876
No 18
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.07 E-value=1.9e-06 Score=67.32 Aligned_cols=68 Identities=18% Similarity=0.079 Sum_probs=48.2
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHH-hcccCCcEEEEe---cc---CCCccccHHHH
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLW-KMLKPGGKLLFV---TC---SLWFEESEEQA 97 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~-~~lk~gG~lvYs---TC---S~~~~ENE~vV 97 (139)
+.||+|++|.+ . ..|.++|...+ ++|||||+++++ +| |..++||.+++
T Consensus 145 ~~~D~I~~d~a---------------~----------~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~ 199 (232)
T 3id6_C 145 ENVDVLYVDIA---------------Q----------PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTE 199 (232)
T ss_dssp CCEEEEEECCC---------------C----------TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHH
T ss_pred cceEEEEecCC---------------C----------hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHH
Confidence 58999999987 1 23555555444 499999999977 89 99999999999
Q ss_pred HHHHhhCCCcEEecCCCcccCC
Q psy15213 98 IIFSKNHKDSIRLNSPGQLLPT 119 (139)
Q Consensus 98 ~~~l~~~~~~~~~~~~~~~~P~ 119 (139)
.++|+.+ ++++... ..+.|.
T Consensus 200 ~~~L~~~-gf~~~~~-~~l~p~ 219 (232)
T 3id6_C 200 VEKLENS-NFETIQI-INLDPY 219 (232)
T ss_dssp HHHHHHT-TEEEEEE-EECTTT
T ss_pred HHHHHHC-CCEEEEE-eccCCC
Confidence 9999987 4765543 234553
No 19
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.06 E-value=1.4e-06 Score=72.13 Aligned_cols=68 Identities=16% Similarity=0.156 Sum_probs=49.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCc--cccHHHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF--EESEEQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~--~ENE~vV~~~l 101 (139)
+..||.|++|||+.+.+. .......+.+.+++..+.++|+|||.|++++|+-.. .+..+.+...+
T Consensus 283 ~~~fD~Ii~DPP~~~~~~-------------~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~ 349 (385)
T 2b78_A 283 HLTYDIIIIDPPSFARNK-------------KEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGF 349 (385)
T ss_dssp TCCEEEEEECCCCC------------------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCccEEEECCCCCCCCh-------------hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHH
Confidence 358999999999764321 112234566789999999999999999999999875 44556666666
Q ss_pred hhC
Q psy15213 102 KNH 104 (139)
Q Consensus 102 ~~~ 104 (139)
.+.
T Consensus 350 ~~~ 352 (385)
T 2b78_A 350 GKQ 352 (385)
T ss_dssp TTC
T ss_pred HHc
Confidence 654
No 20
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.03 E-value=9.3e-06 Score=61.09 Aligned_cols=83 Identities=13% Similarity=0.088 Sum_probs=55.9
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
+.||.|++|+++.. . ....+++..+ ++|||||+||+.+|.... ......++..+
T Consensus 133 ~~fD~V~~d~~~~~------------------~----~~~~~~~~~~-~~LkpgG~lv~~~~~~~~---~~~~~~~l~~~ 186 (221)
T 3u81_A 133 DTLDMVFLDHWKDR------------------Y----LPDTLLLEKC-GLLRKGTVLLADNVIVPG---TPDFLAYVRGS 186 (221)
T ss_dssp CCCSEEEECSCGGG------------------H----HHHHHHHHHT-TCCCTTCEEEESCCCCCC---CHHHHHHHHHC
T ss_pred CceEEEEEcCCccc------------------c----hHHHHHHHhc-cccCCCeEEEEeCCCCcc---hHHHHHHHhhC
Confidence 58999999986211 1 1123456666 999999999999998532 23445566667
Q ss_pred CCcEEecCCCcccCCCCCCCCCCcEEEEEEEec
Q psy15213 105 KDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 105 ~~~~~~~~~~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
+.++...++ ..+|.. ...|||++|+++..
T Consensus 187 ~~~~~~~~~-~~~~~~---~~~dG~~~~~~~g~ 215 (221)
T 3u81_A 187 SSFECTHYS-SYLEYM---KVVDGLEKAIYQGP 215 (221)
T ss_dssp TTEEEEEEE-EEETTT---TEEEEEEEEEECCC
T ss_pred CCceEEEcc-cccccC---CCCCceEEEEEeCC
Confidence 777654433 334554 57899999998753
No 21
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.97 E-value=1.7e-05 Score=61.12 Aligned_cols=82 Identities=15% Similarity=0.097 Sum_probs=54.1
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC-----c---cccHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW-----F---EESEE 95 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~-----~---~ENE~ 95 (139)
...||.|++|+++.. ....+..+.++|||||+|++.++... + .++..
T Consensus 134 ~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~ 188 (248)
T 3tfw_A 134 CPAFDLIFIDADKPN-------------------------NPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQ 188 (248)
T ss_dssp CCCCSEEEECSCGGG-------------------------HHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHH
T ss_pred CCCeEEEEECCchHH-------------------------HHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHH
Confidence 358999999987211 13468888999999999999888766 2 22333
Q ss_pred HHHHHH---hhCCCcEEecCCCcccC-CCCCCCCCCcEEEEEEEec
Q psy15213 96 QAIIFS---KNHKDSIRLNSPGQLLP-TVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 96 vV~~~l---~~~~~~~~~~~~~~~~P-~~~~~~~~~GfFia~l~k~ 137 (139)
.+..++ ..++.+....+ .| +. .+.||||+|++++.
T Consensus 189 ~~~~~~~~l~~~~~~~~~~l----~~~g~---~~~DG~~i~~~~~~ 227 (248)
T 3tfw_A 189 GVRQFIEMMGAEPRLTATAL----QTVGT---KGWDGFTLAWVNAA 227 (248)
T ss_dssp HHHHHHHHHHHCTTEEEEEE----EECST---TCSEEEEEEEECCC
T ss_pred HHHHHHHHHhhCCCEEEEEe----ecCCC---CCCCeeEEEEEeCC
Confidence 444443 45666654322 12 12 45799999999864
No 22
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.92 E-value=2.2e-05 Score=58.70 Aligned_cols=66 Identities=15% Similarity=0.254 Sum_probs=48.5
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
+.||+|+.|+++..+|.. ..+......++..+|..|.++|||||.+|.. +...++...+.+.++.+
T Consensus 90 ~~~D~Vlsd~~~~~~g~~-----------~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k---~~~~~~~~~~~~~l~~~ 155 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIP-----------SRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK---QFQGDMTNDFIAIWRKN 155 (191)
T ss_dssp SSEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE---EECSTHHHHHHHHHGGG
T ss_pred CcceEEecCCCcCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHccCCCEEEEE---EcCCCCHHHHHHHHHHh
Confidence 389999999987666552 1233445677889999999999999999843 44556666677777654
No 23
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.87 E-value=3.5e-05 Score=59.97 Aligned_cols=94 Identities=15% Similarity=0.054 Sum_probs=62.0
Q ss_pred CCCcCEEEEcCCCCCcc-------ccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHH
Q psy15213 24 NKYFDRILADLPCTGSG-------VVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQ 96 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G-------~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~v 96 (139)
.+.||.|+.+|||.+.+ ++...|...+.-. ..-...+.+++..+.++|+|||.+++.++.. +.+.
T Consensus 174 ~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~----~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~----~~~~ 245 (276)
T 2b3t_A 174 GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAA----DSGMADIVHIIEQSRNALVSGGFLLLEHGWQ----QGEA 245 (276)
T ss_dssp TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCH----HHHTHHHHHHHHHHGGGEEEEEEEEEECCSS----CHHH
T ss_pred cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCC----CcHHHHHHHHHHHHHHhcCCCCEEEEEECch----HHHH
Confidence 46899999999999874 3444454443211 1223456889999999999999999976543 4455
Q ss_pred HHHHHhhCCCcEEecCCCcccCCCCCCCCCCcEEEEE
Q psy15213 97 AIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 133 (139)
Q Consensus 97 V~~~l~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~ 133 (139)
+..++++. ++..+ .+.+.. .+.+.|++|+
T Consensus 246 ~~~~l~~~-Gf~~v----~~~~d~---~g~~r~~~~~ 274 (276)
T 2b3t_A 246 VRQAFILA-GYHDV----ETCRDY---GDNERVTLGR 274 (276)
T ss_dssp HHHHHHHT-TCTTC----CEEECT---TSSEEEEEEE
T ss_pred HHHHHHHC-CCcEE----EEEecC---CCCCcEEEEE
Confidence 66777665 33211 233343 6778888875
No 24
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.77 E-value=0.00011 Score=56.50 Aligned_cols=102 Identities=14% Similarity=0.021 Sum_probs=51.1
Q ss_pred CCCcCEEEEcCCCCCc-cccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHh
Q psy15213 24 NKYFDRILADLPCTGS-GVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSK 102 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~-G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~ 102 (139)
.+.||.|++|||+... +.-..+|+...... . ........+++..+.++|||||++++. .+.+....+...+.
T Consensus 117 ~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a--~-~~~~~~~~~~l~~~~~~LkpgG~l~~~----~~~~~~~~~~~~l~ 189 (259)
T 3lpm_A 117 KERADIVTCNPPYFATPDTSLKNTNEHFRIA--R-HEVMCTLEDTIRVAASLLKQGGKANFV----HRPERLLDIIDIMR 189 (259)
T ss_dssp TTCEEEEEECCCC--------------------------HHHHHHHHHHHHHEEEEEEEEEE----ECTTTHHHHHHHHH
T ss_pred cCCccEEEECCCCCCCccccCCCCchHHHhh--h-ccccCCHHHHHHHHHHHccCCcEEEEE----EcHHHHHHHHHHHH
Confidence 5789999999999766 22222332211110 0 111223458999999999999999994 34455555666666
Q ss_pred hCCCcEEecCCCcccCCCCCCCCCCcEEEEEEEec
Q psy15213 103 NHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 103 ~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
.+ ++..... ..+.|.. .....+++..++|.
T Consensus 190 ~~-~~~~~~~-~~v~~~~---~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 190 KY-RLEPKRI-QFVHPRS---DREANTVLVEGIKD 219 (259)
T ss_dssp HT-TEEEEEE-EEEESST---TSCCSEEEEEEEET
T ss_pred HC-CCceEEE-EEeecCC---CCCcEEEEEEEEeC
Confidence 54 3433221 1123322 33345566666554
No 25
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.74 E-value=9.9e-06 Score=65.91 Aligned_cols=65 Identities=22% Similarity=0.222 Sum_probs=43.3
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcE-EEEeccCCCccccHHHHHHHHh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGK-LLFVTCSLWFEESEEQAIIFSK 102 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~-lvYsTCS~~~~ENE~vV~~~l~ 102 (139)
.+.||.|++||||.+.+.- . .+....+.+.+++..+.++|+|||. ++.++|+... +++....++.
T Consensus 223 ~~~fD~Ii~dPP~~~~~~~---~---------~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~--~~~~~~~~l~ 288 (332)
T 2igt_A 223 GSTYDIILTDPPKFGRGTH---G---------EVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRA--SFYSMHELMR 288 (332)
T ss_dssp TCCBSEEEECCCSEEECTT---C---------CEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTS--CHHHHHHHHH
T ss_pred CCCceEEEECCccccCCch---H---------HHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCC--CHHHHHHHHH
Confidence 4689999999998776421 0 0112345568899999999999999 5666676653 3333444443
No 26
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.73 E-value=2.4e-05 Score=59.06 Aligned_cols=41 Identities=20% Similarity=0.286 Sum_probs=33.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
.+.||.|++|++|+ .+.+++..+.++|+|||+++++++.+.
T Consensus 124 ~~~fD~I~~~~~~~-------------------------~~~~~l~~~~~~L~pgG~lv~~~~~~~ 164 (233)
T 2gpy_A 124 YPLFDVLFIDAAKG-------------------------QYRRFFDMYSPMVRPGGLILSDNVLFR 164 (233)
T ss_dssp SCCEEEEEEEGGGS-------------------------CHHHHHHHHGGGEEEEEEEEEETTTC-
T ss_pred CCCccEEEECCCHH-------------------------HHHHHHHHHHHHcCCCeEEEEEcCCcC
Confidence 36899999999853 346788999999999999999976543
No 27
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.71 E-value=2.9e-05 Score=63.54 Aligned_cols=74 Identities=15% Similarity=0.151 Sum_probs=45.1
Q ss_pred CcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhCC
Q psy15213 26 YFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHK 105 (139)
Q Consensus 26 ~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~~ 105 (139)
.||.|++|||..|. ...+++.++++|+|||++|+... -..-+..+.+.
T Consensus 295 ~fD~Vv~dPPr~g~----------------------------~~~~~~~l~~~g~ivyvsc~p~t--~ard~~~l~~~-- 342 (369)
T 3bt7_A 295 QCETIFVDPPRSGL----------------------------DSETEKMVQAYPRILYISCNPET--LCKNLETLSQT-- 342 (369)
T ss_dssp CEEEEEECCCTTCC----------------------------CHHHHHHHTTSSEEEEEESCHHH--HHHHHHHHHHH--
T ss_pred CCCEEEECcCcccc----------------------------HHHHHHHHhCCCEEEEEECCHHH--HHHHHHHHhhC--
Confidence 79999999996642 23445556789999999997432 22233333332
Q ss_pred CcEEecC-CCcccCCCCCCCCCCcEEEEEEEec
Q psy15213 106 DSIRLNS-PGQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 106 ~~~~~~~-~~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
+++..+ +..+||++ +-.+- +|+|+|+
T Consensus 343 -y~~~~~~~~D~FP~T---~HvE~--v~ll~r~ 369 (369)
T 3bt7_A 343 -HKVERLALFDQFPYT---HHMQC--GVLLTAK 369 (369)
T ss_dssp -EEEEEEEEECCSTTS---SCCEE--EEEEEEC
T ss_pred -cEEEEEEeeccCCCC---CcEEE--EEEEEeC
Confidence 333322 24579987 43343 6777663
No 28
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.68 E-value=4.3e-06 Score=70.04 Aligned_cols=54 Identities=19% Similarity=0.060 Sum_probs=39.0
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
...||+|++||+|+. .+++..|+++|++|| ++|+|||-........+...+.+
T Consensus 123 ~~~fD~V~lDP~g~~--------------------------~~~l~~a~~~Lk~gG-ll~~t~t~~~~l~g~~~~~~~rk 175 (392)
T 3axs_A 123 GFGFDYVDLDPFGTP--------------------------VPFIESVALSMKRGG-ILSLTATDTAPLSGTYPKTCMRR 175 (392)
T ss_dssp SSCEEEEEECCSSCC--------------------------HHHHHHHHHHEEEEE-EEEEEECCHHHHTTSSHHHHHHH
T ss_pred CCCCcEEEECCCcCH--------------------------HHHHHHHHHHhCCCC-EEEEEecchhhhccccHHHHHHH
Confidence 357999999997431 347889999999998 88999987764333334455555
Q ss_pred C
Q psy15213 104 H 104 (139)
Q Consensus 104 ~ 104 (139)
+
T Consensus 176 Y 176 (392)
T 3axs_A 176 Y 176 (392)
T ss_dssp H
T ss_pred h
Confidence 4
No 29
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.56 E-value=4.8e-05 Score=59.77 Aligned_cols=64 Identities=16% Similarity=0.093 Sum_probs=46.3
Q ss_pred cCccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC---cc
Q psy15213 15 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW---FE 91 (139)
Q Consensus 15 ~~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~---~~ 91 (139)
..|...+.....||.|++|+|.+. .+++..+.++|||||.+++++|+-. ..
T Consensus 181 ~~D~~~~~~~~~fD~Vi~~~p~~~--------------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 234 (278)
T 2frn_A 181 NMDNRDFPGENIADRILMGYVVRT--------------------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPR 234 (278)
T ss_dssp CSCTTTCCCCSCEEEEEECCCSSG--------------------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTT
T ss_pred ECCHHHhcccCCccEEEECCchhH--------------------------HHHHHHHHHHCCCCeEEEEEEeeccccccc
Confidence 344444444678999999999322 4567788999999999999999853 34
Q ss_pred ccHHHHHHHHhhC
Q psy15213 92 ESEEQAIIFSKNH 104 (139)
Q Consensus 92 ENE~vV~~~l~~~ 104 (139)
+..+.+...+++.
T Consensus 235 ~~~~~i~~~~~~~ 247 (278)
T 2frn_A 235 EPFETFKRITKEY 247 (278)
T ss_dssp TTHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHc
Confidence 5556666666664
No 30
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.53 E-value=0.00014 Score=55.65 Aligned_cols=75 Identities=19% Similarity=0.112 Sum_probs=49.9
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC-----ccc-c----
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW-----FEE-S---- 93 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~-----~~E-N---- 93 (139)
.+.||.|++|++++ .+..++..+.++|+|||.|++.+|.+. +++ +
T Consensus 145 ~~~fD~I~~d~~~~-------------------------~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~ 199 (237)
T 3c3y_A 145 EGSYDFGFVDADKP-------------------------NYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFM 199 (237)
T ss_dssp TTCEEEEEECSCGG-------------------------GHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGG
T ss_pred CCCcCEEEECCchH-------------------------HHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhH
Confidence 36899999998732 135678888999999999999988654 311 2
Q ss_pred ---HHHH---HHHHhhCCCcEEecCCCcccCCCCCCCCCCcEEEEEE
Q psy15213 94 ---EEQA---IIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLF 134 (139)
Q Consensus 94 ---E~vV---~~~l~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~l 134 (139)
...+ .+.+..++.+... ++|. .||+++|+-
T Consensus 200 r~~~~~i~~~~~~l~~~~~~~~~-----~lp~------~dG~~~~~~ 235 (237)
T 3c3y_A 200 KENREAVIELNKLLAADPRIEIV-----HLPL------GDGITFCRR 235 (237)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEE-----EECS------TTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCeEEE-----EEEe------CCceEEEEE
Confidence 1223 2334566666543 3453 489999863
No 31
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.41 E-value=0.00048 Score=55.58 Aligned_cols=63 Identities=22% Similarity=0.195 Sum_probs=47.6
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
..||.|++|||+.- .......+..++.+++..+.+.|||||++++.|| |++.++.+++
T Consensus 271 ~~~D~Ii~npPyg~--------------r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~------~~~~~~~~~~-- 328 (354)
T 3tma_A 271 PEVDRILANPPHGL--------------RLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL------RPALLKRALP-- 328 (354)
T ss_dssp CCCSEEEECCCSCC------------------CHHHHHHHHHHHHHHHHTSCTTCEEEEEES------CHHHHHHHCC--
T ss_pred CCCCEEEECCCCcC--------------ccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC------CHHHHHHHhh--
Confidence 46899999999731 1122345677889999999999999999999988 5677778777
Q ss_pred CCcEE
Q psy15213 105 KDSIR 109 (139)
Q Consensus 105 ~~~~~ 109 (139)
.+++.
T Consensus 329 ~g~~~ 333 (354)
T 3tma_A 329 PGFAL 333 (354)
T ss_dssp TTEEE
T ss_pred cCcEE
Confidence 45544
No 32
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.40 E-value=0.00032 Score=54.02 Aligned_cols=77 Identities=18% Similarity=0.169 Sum_probs=48.8
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC-----ccccH---HH
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW-----FEESE---EQ 96 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~-----~~ENE---~v 96 (139)
+.||.|++|++. .. ....+..+.++|+|||.|++..+.+. +..++ ..
T Consensus 135 ~~fD~V~~d~~~------------------~~-------~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~ 189 (242)
T 3r3h_A 135 HQFDFIFIDADK------------------TN-------YLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTRE 189 (242)
T ss_dssp SCEEEEEEESCG------------------GG-------HHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHH
T ss_pred CCEeEEEEcCCh------------------HH-------hHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHH
Confidence 689999999871 11 13468888999999999998665543 22332 22
Q ss_pred HHHH---HhhCCCcEEecCCCcccCCCCCCCCCCcEEEEEEEec
Q psy15213 97 AIIF---SKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 97 V~~~---l~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
+..+ +...+.++. .++|. +|||++|+.++.
T Consensus 190 ~~~~~~~l~~~~~~~~-----~~lp~------~dG~~~~~k~~~ 222 (242)
T 3r3h_A 190 IKKLNQVIKNDSRVFV-----SLLAI------ADGMFLVQPIAE 222 (242)
T ss_dssp HHHHHHHHHTCCSEEE-----EEESS------SSCEEEEEEC--
T ss_pred HHHHHHHHhhCCCEEE-----EEEEc------cCceEEEEEcCC
Confidence 3443 345555543 24553 499999997764
No 33
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.24 E-value=0.0021 Score=52.22 Aligned_cols=99 Identities=20% Similarity=0.238 Sum_probs=58.1
Q ss_pred CccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHH----------HHHHHHHHHHHHhcccCCcEEEEec
Q psy15213 16 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL----------SKYSCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 16 ~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l----------~~~Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
.|...|.....||.|+.+||+...+....- ...........+ ...+..++.++.++|++||++++.+
T Consensus 88 ~D~~~~~~~~~fD~Ii~NPPy~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 88 ADFLLWEPGEAFDLILGNPPYGIVGEASKY---PIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp SCGGGCCCSSCEEEEEECCCCCCBSCTTTC---SBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CChhhcCccCCCCEEEECcCccCccccccc---ccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 344455545689999999998876542110 000111111111 2356789999999999999999988
Q ss_pred cCC--CccccHHHHHHHHhhCCCcEEecCCCcccCC
Q psy15213 86 CSL--WFEESEEQAIIFSKNHKDSIRLNSPGQLLPT 119 (139)
Q Consensus 86 CS~--~~~ENE~vV~~~l~~~~~~~~~~~~~~~~P~ 119 (139)
.+- .....+.+.+.+++... ...+.++ .++++
T Consensus 165 p~~~l~~~~~~~lr~~l~~~~~-~~i~~l~-~~F~~ 198 (421)
T 2ih2_A 165 PATWLVLEDFALLREFLAREGK-TSVYYLG-EVFPQ 198 (421)
T ss_dssp EGGGGTCGGGHHHHHHHHHHSE-EEEEEEE-SCSTT
T ss_pred ChHHhcCccHHHHHHHHHhcCC-eEEEECC-CCCCC
Confidence 763 23344555555555542 3333333 45553
No 34
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.22 E-value=0.00065 Score=55.46 Aligned_cols=53 Identities=19% Similarity=0.046 Sum_probs=39.4
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCc-EEEEeccCCCccccH---HHHHHH
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG-KLLFVTCSLWFEESE---EQAIIF 100 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG-~lvYsTCS~~~~ENE---~vV~~~ 100 (139)
+.||.|++||||+.. . ..++|.++.+.||||| .++|++|+ ..++. ..+..+
T Consensus 240 ~~fD~Vi~~~p~~~~-------------------~----~~~~l~~~~~~LkpgG~~~~~~~~~--~~~~~~~~~~~~~~ 294 (373)
T 2qm3_A 240 HKFDTFITDPPETLE-------------------A----IRAFVGRGIATLKGPRCAGYFGITR--RESSLDKWREIQKL 294 (373)
T ss_dssp SCBSEEEECCCSSHH-------------------H----HHHHHHHHHHTBCSTTCEEEEEECT--TTCCHHHHHHHHHH
T ss_pred CCccEEEECCCCchH-------------------H----HHHHHHHHHHHcccCCeEEEEEEec--CcCCHHHHHHHHHH
Confidence 479999999996531 1 2788999999999999 55888887 23343 456666
Q ss_pred Hh
Q psy15213 101 SK 102 (139)
Q Consensus 101 l~ 102 (139)
+.
T Consensus 295 l~ 296 (373)
T 2qm3_A 295 LL 296 (373)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 35
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.18 E-value=0.0021 Score=46.71 Aligned_cols=68 Identities=16% Similarity=0.200 Sum_probs=45.9
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHh
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSK 102 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~ 102 (139)
....||.|+.|.++...|. ...+.......+..+|..+.++|||||.++..+.. .++...+.+.+.
T Consensus 103 ~~~~fD~v~~~~~~~~~g~-----------~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~---~~~~~~l~~~l~ 168 (201)
T 2plw_A 103 QDKKIDIILSDAAVPCIGN-----------KIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL---GSQTNNLKTYLK 168 (201)
T ss_dssp TTCCEEEEEECCCCCCCSC-----------HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC---STTHHHHHHHHH
T ss_pred CCCcccEEEeCCCcCCCCC-----------cccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC---CCCHHHHHHHHH
Confidence 3468999999986443332 11233444567888999999999999999975533 345555666666
Q ss_pred hC
Q psy15213 103 NH 104 (139)
Q Consensus 103 ~~ 104 (139)
.+
T Consensus 169 ~~ 170 (201)
T 2plw_A 169 GM 170 (201)
T ss_dssp TT
T ss_pred HH
Confidence 54
No 36
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.10 E-value=0.0008 Score=48.87 Aligned_cols=75 Identities=8% Similarity=0.057 Sum_probs=40.1
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHh----HHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHH
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKN----DIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIF 100 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~----~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~ 100 (139)
+.||.|++|||+...+.+..-+.......+. .-..-.....+++..+.++|||||++++..+. ....+.+..+
T Consensus 100 ~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~~ 176 (215)
T 4dzr_A 100 RPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG---HNQADEVARL 176 (215)
T ss_dssp CCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT---TSCHHHHHHH
T ss_pred CcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC---CccHHHHHHH
Confidence 7899999999998776653322111000000 00011123478899999999999995555554 3344556666
Q ss_pred Hh
Q psy15213 101 SK 102 (139)
Q Consensus 101 l~ 102 (139)
+.
T Consensus 177 l~ 178 (215)
T 4dzr_A 177 FA 178 (215)
T ss_dssp TG
T ss_pred HH
Confidence 66
No 37
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.09 E-value=0.00034 Score=56.53 Aligned_cols=47 Identities=15% Similarity=0.214 Sum_probs=37.7
Q ss_pred cCccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 15 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 15 ~~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
..|...+. ..||.|++|||..+ .+++..+.++|+|||.++|++|+..
T Consensus 249 ~~D~~~~~--~~fD~Vi~dpP~~~--------------------------~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 249 LSDVREVD--VKGNRVIMNLPKFA--------------------------HKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp ESCGGGCC--CCEEEEEECCTTTG--------------------------GGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred ECChHHhc--CCCcEEEECCcHhH--------------------------HHHHHHHHHHcCCCCEEEEEEeecC
Confidence 34455554 68999999999432 1778889999999999999999988
No 38
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.05 E-value=0.0017 Score=45.15 Aligned_cols=68 Identities=16% Similarity=0.183 Sum_probs=46.0
Q ss_pred cCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHH
Q psy15213 22 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFS 101 (139)
Q Consensus 22 ~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l 101 (139)
...+.||.|++|+|+...|.. ..+.......+..++..+.++|+|||.++.++-. .++...+...+
T Consensus 84 ~~~~~~D~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~~~~~~ 149 (180)
T 1ej0_A 84 VGDSKVQVVMSDMAPNMSGTP-----------AVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ---GEGFDEYLREI 149 (180)
T ss_dssp HTTCCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES---STTHHHHHHHH
T ss_pred CCCCceeEEEECCCccccCCC-----------ccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec---CCcHHHHHHHH
Confidence 344689999999997765441 1223344556789999999999999999976543 33444444555
Q ss_pred hh
Q psy15213 102 KN 103 (139)
Q Consensus 102 ~~ 103 (139)
..
T Consensus 150 ~~ 151 (180)
T 1ej0_A 150 RS 151 (180)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 39
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.01 E-value=0.00061 Score=54.43 Aligned_cols=100 Identities=17% Similarity=0.206 Sum_probs=53.1
Q ss_pred cccccCccccccC--CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 11 INKKTNNRFRFYK--NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 11 ~~~~~~~~~~~~~--~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
+.-...|...|.. .+.||.|++|+|-.. | |. . .-.+.+.+..+.+.|+|||+++..++|.
T Consensus 140 v~~~~~D~~~~l~~~~~~fDvIi~D~~~p~-~-----~~-------~-----~l~~~~f~~~~~~~LkpgG~lv~~~~s~ 201 (294)
T 3adn_A 140 FKLVIDDGVNFVNQTSQTFDVIISDCTDPI-G-----PG-------E-----SLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp CCEECSCSCC---CCCCCEEEEEECC----------------------------CCHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred eEEEEChHHHHHhhcCCCccEEEECCCCcc-C-----cc-------h-----hccHHHHHHHHHHhcCCCCEEEEecCCc
Confidence 3333445555532 468999999998210 0 00 0 0123678888999999999999877653
Q ss_pred C--ccccHHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCcEEEEE
Q psy15213 89 W--FEESEEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 133 (139)
Q Consensus 89 ~--~~ENE~vV~~~l~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~ 133 (139)
. ++.-..+++.+-+.++.......+...+| .+..||.+|-
T Consensus 202 ~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p-----~g~~~f~~as 243 (294)
T 3adn_A 202 FLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYY-----GGIMTFAWAT 243 (294)
T ss_dssp SSCCHHHHHHHHHHHHHCSEEEEEEEECTTSS-----SSEEEEEEEE
T ss_pred ccchHHHHHHHHHHHHHCCCeEEEEEEecccC-----CCceEEEEEe
Confidence 2 33344455555455655443322222333 3445776663
No 40
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.93 E-value=0.0011 Score=48.13 Aligned_cols=68 Identities=18% Similarity=0.150 Sum_probs=40.9
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCcc--ccHHHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE--ESEEQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~--ENE~vV~~~l 101 (139)
.+.||.|++|+|.-. ..+........ .+.+++..+.++|||||+++.++++-.+. +..+.+..++
T Consensus 91 ~~~fD~v~~~~~~~~------~~~~~~~~~~~-------~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~ 157 (197)
T 3eey_A 91 DCPVKAVMFNLGYLP------SGDHSISTRPE-------TTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFL 157 (197)
T ss_dssp CSCEEEEEEEESBCT------TSCTTCBCCHH-------HHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHH
T ss_pred cCCceEEEEcCCccc------CcccccccCcc-------cHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHH
Confidence 468999999987410 01101111111 34568999999999999999887654322 2234445555
Q ss_pred hhC
Q psy15213 102 KNH 104 (139)
Q Consensus 102 ~~~ 104 (139)
...
T Consensus 158 ~~l 160 (197)
T 3eey_A 158 KGV 160 (197)
T ss_dssp TTS
T ss_pred HhC
Confidence 544
No 41
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.93 E-value=0.00034 Score=56.32 Aligned_cols=105 Identities=15% Similarity=0.112 Sum_probs=56.8
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEecc-CCCccccHHHHHHHHh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC-SLWFEESEEQAIIFSK 102 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTC-S~~~~ENE~vV~~~l~ 102 (139)
...||.|+.+||.+ .+.. ++....+...........+..++.+++++|+|||++++.+. ++...+.+..+...|.
T Consensus 199 ~~~fD~Ii~NPPfg---~~~~-~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~ 274 (344)
T 2f8l_A 199 VDPVDVVISDLPVG---YYPD-DENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIK 274 (344)
T ss_dssp CCCEEEEEEECCCS---EESC-HHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHH
T ss_pred cCCccEEEECCCCC---CcCc-hhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHH
Confidence 46899999999973 2211 00000000000011223567889999999999999999873 3333344455554444
Q ss_pred hCCCc-EEecCCCcccCCCCCCCCCCcEEEEEEEec
Q psy15213 103 NHKDS-IRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 103 ~~~~~-~~~~~~~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
+.... .++.+|..+|+.. ...-.|-+|+|.
T Consensus 275 ~~~~~~~ii~lp~~~F~~~-----~~~~~i~vl~k~ 305 (344)
T 2f8l_A 275 KNGHIEGIIKLPETLFKSE-----QARKSILILEKA 305 (344)
T ss_dssp HHEEEEEEEECCGGGSCC------CCCEEEEEEEEC
T ss_pred hCCeEEEeeeCChhhccCC-----CCceEEEEEECC
Confidence 33222 2345565666643 234455556654
No 42
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=96.92 E-value=0.0021 Score=53.63 Aligned_cols=85 Identities=20% Similarity=0.199 Sum_probs=51.4
Q ss_pred CCcCEEEEcCCCCCccccccC---CCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC--CccccHHHHH-
Q psy15213 25 KYFDRILADLPCTGSGVVRRN---PDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL--WFEESEEQAI- 98 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~---p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~--~~~ENE~vV~- 98 (139)
..||.|+.+||.++....... .+..+.. ...+...+.+++.+|||||++++.++.- .....+..+.
T Consensus 252 ~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~--------~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~ 323 (445)
T 2okc_A 252 TLVDVILANPPFGTRPAGSVDINRPDFYVET--------KNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRK 323 (445)
T ss_dssp SCEEEEEECCCSSCCCTTCCCCCCTTSSSCC--------SCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHH
T ss_pred CCcCEEEECCCCCCcccccchhhHhhcCCCC--------cchHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHH
Confidence 489999999999986553221 1111111 1235688999999999999999988642 2222334444
Q ss_pred HHHhhCCCcE-EecCCCcccC
Q psy15213 99 IFSKNHKDSI-RLNSPGQLLP 118 (139)
Q Consensus 99 ~~l~~~~~~~-~~~~~~~~~P 118 (139)
+++++. .+. ++.+|..+|+
T Consensus 324 ~L~~~~-~l~~ii~lp~~~F~ 343 (445)
T 2okc_A 324 RLLQDF-NLHTILRLPTGIFY 343 (445)
T ss_dssp HHHHHE-EEEEEEECCSSSSS
T ss_pred HHHhcC-cEEEEEeCCCCCcc
Confidence 566654 232 3445544554
No 43
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.86 E-value=0.0021 Score=47.80 Aligned_cols=75 Identities=19% Similarity=0.145 Sum_probs=40.7
Q ss_pred CCCcCEEEEcCCCCCccccccCCCC-CccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDI-PWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSK 102 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~-~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~ 102 (139)
.+.||.|++|||+...+.-...... .+....... ....+++..+.++|||||++++.+.+- + +..+.+...++
T Consensus 121 ~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~-~-~~~~~~~~~l~ 194 (230)
T 3evz_A 121 EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGE----EFSVKLLEEAFDHLNPGGKVALYLPDK-E-KLLNVIKERGI 194 (230)
T ss_dssp CSCEEEEEECCCCC---------------CCSSSC----HHHHHHHHHHGGGEEEEEEEEEEEESC-H-HHHHHHHHHHH
T ss_pred cCceeEEEECCCCcCCccccccChhhhhccCccch----HHHHHHHHHHHHHhCCCeEEEEEeccc-H-hHHHHHHHHHH
Confidence 3689999999998766552221111 111111111 223679999999999999999865442 2 33344455555
Q ss_pred hC
Q psy15213 103 NH 104 (139)
Q Consensus 103 ~~ 104 (139)
+.
T Consensus 195 ~~ 196 (230)
T 3evz_A 195 KL 196 (230)
T ss_dssp HT
T ss_pred Hc
Confidence 54
No 44
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.84 E-value=0.00018 Score=53.72 Aligned_cols=46 Identities=24% Similarity=0.277 Sum_probs=35.9
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQA 97 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV 97 (139)
...||+|+++++|. .++.++.+.|||||++++++|+...+++..++
T Consensus 149 ~~~fD~i~~~~~~~----------------------------~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 194 (226)
T 1i1n_A 149 EAPYDAIHVGAAAP----------------------------VVPQALIDQLKPGGRLILPVGPAGGNQMLEQY 194 (226)
T ss_dssp GCCEEEEEECSBBS----------------------------SCCHHHHHTEEEEEEEEEEESCTTSCEEEEEE
T ss_pred CCCcCEEEECCchH----------------------------HHHHHHHHhcCCCcEEEEEEecCCCceEEEEE
Confidence 46799999999972 12346778999999999999998877665443
No 45
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.83 E-value=0.0028 Score=48.51 Aligned_cols=79 Identities=10% Similarity=0.069 Sum_probs=53.4
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHh-cccCCcEEEEec-cCCCccccHHHHHHHHh
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWK-MLKPGGKLLFVT-CSLWFEESEEQAIIFSK 102 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~-~lk~gG~lvYsT-CS~~~~ENE~vV~~~l~ 102 (139)
..||.|++|+. +. ...++|..+.+ .|||||+|++.. |.+.+..+++.+..+++
T Consensus 151 ~~fD~I~~d~~---------~~----------------~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~ 205 (236)
T 2bm8_A 151 MAHPLIFIDNA---------HA----------------NTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLG 205 (236)
T ss_dssp SCSSEEEEESS---------CS----------------SHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHH
T ss_pred CCCCEEEECCc---------hH----------------hHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHH
Confidence 36999999876 10 12357888886 999999999964 44556678789999999
Q ss_pred hCC-CcEEecCCCcccCCCCCCCCCCcEEEEE
Q psy15213 103 NHK-DSIRLNSPGQLLPTVNKKQDYDGFFYSL 133 (139)
Q Consensus 103 ~~~-~~~~~~~~~~~~P~~~~~~~~~GfFia~ 133 (139)
.++ +++........++ ...+||+...
T Consensus 206 ~~~~~f~~~~~~~~~~~-----~~~~g~~~~~ 232 (236)
T 2bm8_A 206 AFRDVLSMDMLYANASS-----QLDRGVLRRV 232 (236)
T ss_dssp TTTTTEEEETTTTTSCT-----TTTTCEEEEC
T ss_pred hCcccEEEcchhhcccc-----cccchHhhhc
Confidence 987 6766543211111 3347776654
No 46
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=96.82 E-value=0.0013 Score=54.65 Aligned_cols=81 Identities=17% Similarity=0.128 Sum_probs=51.8
Q ss_pred ccccCccccccC-----CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEecc
Q psy15213 12 NKKTNNRFRFYK-----NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 12 ~~~~~~~~~~~~-----~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTC 86 (139)
+-...|...|.. .++||.|++|+|=. | ....+..+ .-....+.++..+.+.|+|||.++.-+|
T Consensus 248 ~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~--------P---~~~~p~~L-~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 248 QVLIEDCIPVLKRYAKEGREFDYVINDLTAV--------P---ISTSPEED-STWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp EEEESCHHHHHHHHHHHTCCEEEEEEECCSS--------C---CCCC-----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECcHHHHHHhhhccCCCceEEEECCCCc--------c---cCcCchhh-hHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 333455555543 47899999999720 1 01112121 2246667778888999999999999999
Q ss_pred CCCccccHHHHHHHHhhC
Q psy15213 87 SLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 87 S~~~~ENE~vV~~~l~~~ 104 (139)
|.+..|--...+..|+..
T Consensus 316 s~~~~e~~~~~~~~l~~~ 333 (364)
T 2qfm_A 316 CVNLTEALSLYEEQLGRL 333 (364)
T ss_dssp ETTCHHHHHHHHHHHTTS
T ss_pred CcchHHHHHHHHHHHHHh
Confidence 998865555666545543
No 47
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.78 E-value=0.003 Score=45.35 Aligned_cols=67 Identities=9% Similarity=0.081 Sum_probs=38.3
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCc---cccHHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF---EESEEQAIIF 100 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~---~ENE~vV~~~ 100 (139)
.+.||.|+++++.-. .....+......+.+.|..+.+.|||||+++.+.++-++ +|.+.+. .+
T Consensus 87 ~~~fD~v~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~-~~ 152 (185)
T 3mti_A 87 REPIRAAIFNLGYLP-------------SADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVL-EY 152 (185)
T ss_dssp CSCEEEEEEEEC------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHH-HH
T ss_pred cCCcCEEEEeCCCCC-------------CcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHH-HH
Confidence 568999999865211 111222233455677899999999999999988877553 3444444 44
Q ss_pred HhhC
Q psy15213 101 SKNH 104 (139)
Q Consensus 101 l~~~ 104 (139)
++..
T Consensus 153 ~~~l 156 (185)
T 3mti_A 153 VIGL 156 (185)
T ss_dssp HHHS
T ss_pred HHhC
Confidence 4443
No 48
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.74 E-value=0.00079 Score=52.99 Aligned_cols=86 Identities=17% Similarity=0.138 Sum_probs=49.7
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC--ccccHHHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW--FEESEEQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~--~~ENE~vV~~~l 101 (139)
.+.||.|++|+|+.. |. .. .+ .+.+++..+.+.|+|||.++..+++.. .+....+.+.+-
T Consensus 150 ~~~fD~Ii~d~~~~~-~~------------~~---~l--~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~ 211 (281)
T 1mjf_A 150 NRGFDVIIADSTDPV-GP------------AK---VL--FSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMK 211 (281)
T ss_dssp CCCEEEEEEECCCCC---------------------T--TSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHH
T ss_pred cCCeeEEEECCCCCC-Cc------------ch---hh--hHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHH
Confidence 468999999999421 10 00 00 246778888999999999999877643 322333333333
Q ss_pred hhCCCcEEecCCCcccCCCCCCCCCCcEEEEE
Q psy15213 102 KNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 133 (139)
Q Consensus 102 ~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~ 133 (139)
+.++...... ...|.. .+..||++|.
T Consensus 212 ~~f~~v~~~~---~~vP~~---~g~~~~~~as 237 (281)
T 1mjf_A 212 KVFDRVYYYS---FPVIGY---ASPWAFLVGV 237 (281)
T ss_dssp HHCSEEEEEE---ECCTTS---SSSEEEEEEE
T ss_pred HHCCceEEEE---EecCCC---CceEEEEEee
Confidence 3444433222 124543 4557787774
No 49
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.71 E-value=0.0038 Score=47.18 Aligned_cols=40 Identities=23% Similarity=0.236 Sum_probs=31.0
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.+.||.|++|+++.. +.+++..+.++|||||+|++...-+
T Consensus 140 ~~~fD~V~~~~~~~~-------------------------~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 140 DKVYDMIFIDAAKAQ-------------------------SKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp TSCEEEEEEETTSSS-------------------------HHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred cCCccEEEEcCcHHH-------------------------HHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 468999999987322 3568899999999999999854433
No 50
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.71 E-value=0.0019 Score=50.81 Aligned_cols=67 Identities=15% Similarity=0.019 Sum_probs=39.7
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC--CccccHHHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL--WFEESEEQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~--~~~ENE~vV~~~l 101 (139)
.+.||.|++|+|.. .+. +... ...+++..+.+.|+|||.++..+.+. ..+.-..+++.+-
T Consensus 146 ~~~fD~Ii~d~~~~-~~~----~~~l-------------~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~ 207 (275)
T 1iy9_A 146 ENQYDVIMVDSTEP-VGP----AVNL-------------FTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVK 207 (275)
T ss_dssp CSCEEEEEESCSSC-CSC----CCCC-------------STTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHH
T ss_pred CCCeeEEEECCCCC-CCc----chhh-------------hHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHH
Confidence 46899999999842 111 1101 11456778889999999999987653 2333334444433
Q ss_pred hhCCCcE
Q psy15213 102 KNHKDSI 108 (139)
Q Consensus 102 ~~~~~~~ 108 (139)
+.++...
T Consensus 208 ~~F~~v~ 214 (275)
T 1iy9_A 208 EIFPITK 214 (275)
T ss_dssp TTCSEEE
T ss_pred HhCCCeE
Confidence 4445433
No 51
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.62 E-value=0.0023 Score=49.33 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=29.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEecc
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTC 86 (139)
.+.||.|++|+++. .....+..+.++|||||+|++...
T Consensus 154 ~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 154 HGSYDFIFVDADKD-------------------------NYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp TTCBSEEEECSCST-------------------------THHHHHHHHHHHBCTTCCEEEECT
T ss_pred CCCEEEEEEcCchH-------------------------HHHHHHHHHHHhCCCCeEEEEecC
Confidence 36899999998621 124578888899999999998663
No 52
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.59 E-value=0.0047 Score=47.73 Aligned_cols=72 Identities=17% Similarity=0.250 Sum_probs=37.0
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
...||.|+++||....+ -..+|+...... ..........++..+.++|||||+++... +.+...-+...+.+
T Consensus 113 ~~~fD~Vv~nPPy~~~~-~~~~~~~~~~~a---~~~~~~~~~~~l~~~~~~LkpgG~l~~~~----~~~~~~~~~~~l~~ 184 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDAG-DRRTPDALKAEA---HAMTEGLFEDWIRTASAIMVSGGQLSLIS----RPQSVAEIIAACGS 184 (260)
T ss_dssp TTCEEEEEECCCC-------------------------CCHHHHHHHHHHHEEEEEEEEEEE----CGGGHHHHHHHHTT
T ss_pred CCCcCEEEECCCCcCCC-CCCCcCHHHHHH---hhcCcCCHHHHHHHHHHHcCCCCEEEEEE----cHHHHHHHHHHHHh
Confidence 46899999999988664 122232211100 00111125678999999999999998843 33333334444544
No 53
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.55 E-value=0.0046 Score=44.61 Aligned_cols=63 Identities=24% Similarity=0.304 Sum_probs=42.0
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHH
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIF 100 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~ 100 (139)
..||.|+.|.++...|.. ..+.......+..++..+.++|||||+++.+++.. .+.++....+
T Consensus 96 ~~fD~V~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~l 158 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFR-----------DLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG--SQSRRLQRRL 158 (196)
T ss_dssp GCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS--GGGHHHHHHH
T ss_pred CCCcEEEeCCCCCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC--ccHHHHHHHH
Confidence 579999999865544331 12223345567789999999999999999877643 3334444333
No 54
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.54 E-value=0.0011 Score=53.41 Aligned_cols=68 Identities=18% Similarity=0.243 Sum_probs=42.6
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccC--CCccccHHHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS--LWFEESEEQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS--~~~~ENE~vV~~~l 101 (139)
.+.||.|++|++.. .| | ...+ .+.+++..+.+.|+|||.++..+.+ +.+++...+++.+-
T Consensus 187 ~~~fDvIi~d~~~p-~~-----~-------~~~l-----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~ 248 (321)
T 2pt6_A 187 TNTYDVIIVDSSDP-IG-----P-------AETL-----FNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAK 248 (321)
T ss_dssp CSCEEEEEEECCCS-SS-----G-------GGGG-----SSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHH
T ss_pred CCCceEEEECCcCC-CC-----c-------chhh-----hHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHH
Confidence 46899999998621 11 0 0000 1367888999999999999997654 34444455555555
Q ss_pred hhCCCcEE
Q psy15213 102 KNHKDSIR 109 (139)
Q Consensus 102 ~~~~~~~~ 109 (139)
+.++....
T Consensus 249 ~~F~~v~~ 256 (321)
T 2pt6_A 249 KLFKKVEY 256 (321)
T ss_dssp TTCSEEEE
T ss_pred HHCCCeEE
Confidence 55555443
No 55
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.52 E-value=0.0031 Score=46.50 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=30.1
Q ss_pred cCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 27 FDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 27 fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
||.|++|+++. .+..++..+.++|||||++++.++.+.
T Consensus 127 fD~v~~~~~~~-------------------------~~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 127 IDILFMDCDVF-------------------------NGADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp EEEEEEETTTS-------------------------CHHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred CCEEEEcCChh-------------------------hhHHHHHHHHHhcCCCeEEEEECcccc
Confidence 99999996521 135678899999999999999876554
No 56
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=96.47 E-value=0.0033 Score=47.69 Aligned_cols=40 Identities=20% Similarity=0.511 Sum_probs=31.4
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.+.||.|++|++.. + +.+.+..+.++|||||.|+...+.+
T Consensus 127 ~~~fD~V~~d~~~~------------------~-------~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 127 NDSYQLVFGQVSPM------------------D-------LKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp TTCEEEEEECCCTT------------------T-------HHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred CCCcCeEEEcCcHH------------------H-------HHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 46899999998611 0 1346888899999999999988876
No 57
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.40 E-value=0.0061 Score=46.09 Aligned_cols=73 Identities=18% Similarity=0.214 Sum_probs=48.5
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC--------ccccHHH
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW--------FEESEEQ 96 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~--------~~ENE~v 96 (139)
+.||.|++|++. . .....+..+.++|+|||.|++..+.+. ..+....
T Consensus 147 ~~fD~V~~d~~~------------------~-------~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~ 201 (232)
T 3cbg_A 147 PEFDLIFIDADK------------------R-------NYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQV 201 (232)
T ss_dssp CCEEEEEECSCG------------------G-------GHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHH
T ss_pred CCcCEEEECCCH------------------H-------HHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHH
Confidence 689999999871 0 124578888999999999999888775 2233345
Q ss_pred HHHHHh---hCCCcEEecCCCcccCCCCCCCCCCcEEEEE
Q psy15213 97 AIIFSK---NHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 133 (139)
Q Consensus 97 V~~~l~---~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~ 133 (139)
+..+.+ ..+.+.. .++|. .|||.+++
T Consensus 202 ~~~~~~~l~~~~~~~~-----~~lp~------~dG~~~~~ 230 (232)
T 3cbg_A 202 LQQFNRDLAQDERVRI-----SVIPL------GDGMTLAL 230 (232)
T ss_dssp HHHHHHHHTTCTTEEE-----EEECS------BTCEEEEE
T ss_pred HHHHHHHHhhCCCeEE-----EEEEc------CCeEEEEE
Confidence 555553 3444432 23553 38988875
No 58
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=96.40 E-value=0.0041 Score=49.46 Aligned_cols=46 Identities=20% Similarity=0.366 Sum_probs=30.8
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.+.||.|++|++-.. + | ... -.+.+++..+.+.|||||+++..+-+
T Consensus 167 ~~~fDvIi~d~~~~~-~-----~-------~~~-----l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 167 DNTYDVVIIDTTDPA-G-----P-------ASK-----LFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp TTCEEEEEEECC---------------------------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCceeEEEECCCCcc-c-----c-------chh-----hhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 568999999987210 0 0 000 01367888999999999999987554
No 59
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=96.37 E-value=0.0076 Score=51.97 Aligned_cols=87 Identities=10% Similarity=0.060 Sum_probs=51.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC--CccccHHHH-HHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL--WFEESEEQA-IIF 100 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~--~~~ENE~vV-~~~ 100 (139)
...||.|+.+||.++........+..... ...+...+.+++.+|||||++++.+..- .....+..+ +++
T Consensus 259 ~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~--------~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L 330 (541)
T 2ar0_A 259 LPKAHIVATNPPFGSAAGTNITRTFVHPT--------SNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDL 330 (541)
T ss_dssp SCCEEEEEECCCCTTCSSCCCCSCCSSCC--------SCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHH
T ss_pred ccCCeEEEECCCcccccchhhHhhcCCCC--------CchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHHHHHHH
Confidence 46899999999999765432111111111 1224467999999999999999876532 222234445 455
Q ss_pred HhhCCCc-EEecCCCcccCC
Q psy15213 101 SKNHKDS-IRLNSPGQLLPT 119 (139)
Q Consensus 101 l~~~~~~-~~~~~~~~~~P~ 119 (139)
+++. .+ .++.+|..+|+.
T Consensus 331 ~~~~-~l~~ii~Lp~~~F~~ 349 (541)
T 2ar0_A 331 MDKC-HLHTILRLPTGIFYA 349 (541)
T ss_dssp HHHE-EEEEEEECCSSCSSS
T ss_pred hhcC-CEEEEEEcCcCcccC
Confidence 5554 22 244555555553
No 60
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.37 E-value=0.0067 Score=44.86 Aligned_cols=39 Identities=18% Similarity=0.150 Sum_probs=30.6
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
+.||.|++|++ . ..+..++..+.++|||||+|+.....+
T Consensus 139 ~~fD~v~~~~~---------------~----------~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 139 WQYDLIYIDAD---------------K----------ANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp TCEEEEEECSC---------------G----------GGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred CCccEEEECCC---------------H----------HHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 68999999997 1 123457888899999999998876654
No 61
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.31 E-value=0.0052 Score=46.63 Aligned_cols=52 Identities=17% Similarity=0.101 Sum_probs=36.9
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
...||.|+++||......+.. ......+..++.++.++|+|||+++++.++.
T Consensus 166 ~~~fD~Iv~npp~~~~~~~~~-------------~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 217 (250)
T 1o9g_A 166 GSAPDVVLTDLPYGERTHWEG-------------QVPGQPVAGLLRSLASALPAHAVIAVTDRSR 217 (250)
T ss_dssp TCCCSEEEEECCGGGSSSSSS-------------CCCHHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CCCceEEEeCCCeeccccccc-------------cccccHHHHHHHHHHHhcCCCcEEEEeCcch
Confidence 348999999999643322211 0223556788999999999999999966554
No 62
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.14 E-value=0.0013 Score=51.94 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=44.0
Q ss_pred CCc---CEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHH-hcccCCcEEEEeccCCCccccHHHHHHH
Q psy15213 25 KYF---DRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLW-KMLKPGGKLLFVTCSLWFEESEEQAIIF 100 (139)
Q Consensus 25 ~~f---D~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~-~~lk~gG~lvYsTCS~~~~ENE~vV~~~ 100 (139)
..| |.|+.+|||.+.+. ...+++.+. +.....-......++++.+ +.++|||.+++. +...+++++. .+
T Consensus 188 ~~f~~~D~IvsnPPyi~~~~-~l~~~v~~e--p~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e---~~~~q~~~v~-~~ 260 (284)
T 1nv8_A 188 EKFASIEMILSNPPYVKSSA-HLPKDVLFE--PPEALFGGEDGLDFYREFFGRYDTSGKIVLME---IGEDQVEELK-KI 260 (284)
T ss_dssp GGTTTCCEEEECCCCBCGGG-SCTTSCCCS--CHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE---CCTTCHHHHT-TT
T ss_pred cccCCCCEEEEcCCCCCccc-ccChhhccC--cHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE---ECchHHHHHH-HH
Confidence 368 99999999999887 555665522 1111000011125778888 899999999963 3444555543 44
Q ss_pred Hhh
Q psy15213 101 SKN 103 (139)
Q Consensus 101 l~~ 103 (139)
+..
T Consensus 261 ~~~ 263 (284)
T 1nv8_A 261 VSD 263 (284)
T ss_dssp STT
T ss_pred HHh
Confidence 443
No 63
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=96.13 E-value=0.0012 Score=51.16 Aligned_cols=47 Identities=23% Similarity=0.501 Sum_probs=36.0
Q ss_pred CccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 16 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 16 ~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
.|...+...+.||.|++|+| +| .++|.++.+.|||||++++++|+..
T Consensus 169 ~d~~~~~~~~~fD~Vi~~~~---------~~------------------~~~l~~~~~~LkpgG~l~i~~~~~~ 215 (275)
T 1yb2_A 169 SDIADFISDQMYDAVIADIP---------DP------------------WNHVQKIASMMKPGSVATFYLPNFD 215 (275)
T ss_dssp SCTTTCCCSCCEEEEEECCS---------CG------------------GGSHHHHHHTEEEEEEEEEEESSHH
T ss_pred CchhccCcCCCccEEEEcCc---------CH------------------HHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 34444555578999999887 11 2678889999999999999998763
No 64
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=96.13 E-value=0.0029 Score=50.57 Aligned_cols=46 Identities=24% Similarity=0.242 Sum_probs=30.6
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.+.||.|++|+|... + | .. ...+.+++..+.+.|+|||.++..+.+
T Consensus 166 ~~~fD~Ii~d~~~~~-~-----~-------~~-----~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 166 QDAFDVIITDSSDPM-G-----P-------AE-----SLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp SSCEEEEEEECC-----------------------------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCceEEEECCCCCC-C-----c-------ch-----hhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 468999999998210 0 0 00 113467888999999999999988754
No 65
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.08 E-value=0.016 Score=46.75 Aligned_cols=101 Identities=17% Similarity=0.204 Sum_probs=54.7
Q ss_pred ccccccCccccccC--CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEec--
Q psy15213 10 DINKKTNNRFRFYK--NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT-- 85 (139)
Q Consensus 10 ~~~~~~~~~~~~~~--~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsT-- 85 (139)
+.+-.-.|...|.. .++||+|++|.+-. .|. +... ..++.++.+.+.|+|||.+|.=+
T Consensus 139 Rv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp-~~~----~~~L-------------~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 139 RFKLVIDDGVNFVNQTSQTFDVIISDCTDP-IGP----GESL-------------FTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp TEEEEESCTTTTTSCSSCCEEEEEESCCCC-CCT----TCCS-------------SCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cEEEEechHHHHHhhccccCCEEEEeCCCc-CCC----chhh-------------cCHHHHHHHHHHhCCCCEEEEecCC
Confidence 33333445556643 57899999998721 111 1111 22556677778999999998732
Q ss_pred cCCCccccHHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCcEEEEE
Q psy15213 86 CSLWFEESEEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 133 (139)
Q Consensus 86 CS~~~~ENE~vV~~~l~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~ 133 (139)
+-+.+.+-..+.+.+-+-++...........+| .+.-||.+|-
T Consensus 201 p~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty~-----~g~w~f~~as 243 (294)
T 3o4f_A 201 CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYY-----GGIMTFAWAT 243 (294)
T ss_dssp SSSCCHHHHHHHHHHHHHCSEEEEEEECCTTSS-----SSCEEEEEEE
T ss_pred cccChHHHHHHHHHHHhhCCceeeeeeeeccCC-----CcceeheeEE
Confidence 233444334444444445554433222222344 4556777664
No 66
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=96.07 E-value=0.0047 Score=49.23 Aligned_cols=63 Identities=19% Similarity=0.169 Sum_probs=42.1
Q ss_pred CccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEe-ccC--CCccc
Q psy15213 16 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV-TCS--LWFEE 92 (139)
Q Consensus 16 ~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYs-TCS--~~~~E 92 (139)
.|...+.....||+|++|+|.++. +.|..|+++||+||.|.|. .+. ....+
T Consensus 182 ~D~~~~~~~~~~D~Vi~~~p~~~~--------------------------~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~ 235 (278)
T 3k6r_A 182 MDNRDFPGENIADRILMGYVVRTH--------------------------EFIPKALSIAKDGAIIHYHNTVPEKLMPRE 235 (278)
T ss_dssp SCTTTCCCCSCEEEEEECCCSSGG--------------------------GGHHHHHHHEEEEEEEEEEEEEEGGGTTTT
T ss_pred CcHHHhccccCCCEEEECCCCcHH--------------------------HHHHHHHHHcCCCCEEEEEeeecccccchh
Confidence 345556666789999999995432 3466788999999998653 322 22344
Q ss_pred cHHHHHHHHhhC
Q psy15213 93 SEEQAIIFSKNH 104 (139)
Q Consensus 93 NE~vV~~~l~~~ 104 (139)
-.+.++.+.+..
T Consensus 236 ~~e~i~~~~~~~ 247 (278)
T 3k6r_A 236 PFETFKRITKEY 247 (278)
T ss_dssp THHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 456677776654
No 67
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=96.04 E-value=0.011 Score=41.92 Aligned_cols=52 Identities=17% Similarity=0.326 Sum_probs=36.9
Q ss_pred ccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 17 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 17 ~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
|...+...+.||.|++++|.. ... ....+++..+.++|+|||.++.++.+..
T Consensus 110 d~~~~~~~~~~D~v~~~~~~~--------------~~~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 110 DLYENVKDRKYNKIITNPPIR--------------AGK-------EVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp STTTTCTTSCEEEEEECCCST--------------TCH-------HHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred chhcccccCCceEEEECCCcc--------------cch-------hHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 333344456899999998821 111 2346788999999999999999887753
No 68
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.01 E-value=0.0037 Score=49.17 Aligned_cols=47 Identities=21% Similarity=0.379 Sum_probs=33.0
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.+.||.|++|++.. .|. ...+ .+.+.+..+.+.|+|||.++..+++.
T Consensus 149 ~~~fD~Ii~d~~~~-~~~------------~~~l-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 149 TNTYDVIIVDSSDP-IGP------------AETL-----FNQNFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp CSCEEEEEEECCCT-TTG------------GGGG-----SSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred CCCceEEEEcCCCC-CCc------------chhh-----hHHHHHHHHHHhcCCCcEEEEECCCc
Confidence 46899999998732 110 0010 22678888999999999999987763
No 69
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.01 E-value=0.01 Score=43.91 Aligned_cols=73 Identities=19% Similarity=0.237 Sum_probs=46.6
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCc--------cccHHH
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF--------EESEEQ 96 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~--------~ENE~v 96 (139)
+.||.|++|+| . ..+..++..+.++|+|||.++...+.+.. .+....
T Consensus 144 ~~~D~v~~d~~---------------~----------~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~ 198 (229)
T 2avd_A 144 GTFDVAVVDAD---------------K----------ENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAEC 198 (229)
T ss_dssp TCEEEEEECSC---------------S----------TTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHH
T ss_pred CCccEEEECCC---------------H----------HHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHH
Confidence 58999999988 0 01245788889999999999997765431 122233
Q ss_pred HHHHH---hhCCCcEEecCCCcccCCCCCCCCCCcEEEEE
Q psy15213 97 AIIFS---KNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSL 133 (139)
Q Consensus 97 V~~~l---~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~ 133 (139)
+..+. ..++.+... ++|. .||+.+|+
T Consensus 199 ~~~~~~~l~~~~~~~~~-----~lp~------~dGl~~~~ 227 (229)
T 2avd_A 199 VRNLNERIRRDVRVYIS-----LLPL------GDGLTLAF 227 (229)
T ss_dssp HHHHHHHHHHCTTEEEE-----EECS------TTCEEEEE
T ss_pred HHHHHHHHhhCCCEEEE-----EEec------CCceEEEE
Confidence 44443 344555432 3453 38998875
No 70
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=95.93 E-value=0.017 Score=44.42 Aligned_cols=46 Identities=22% Similarity=0.410 Sum_probs=34.6
Q ss_pred CccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 16 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 16 ~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.|...+.....||.|++|+|+. .++|.++.++|+|||.+++.+++.
T Consensus 171 ~d~~~~~~~~~~D~V~~~~~~~---------------------------~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 171 RDISEGFDEKDVDALFLDVPDP---------------------------WNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp CCGGGCCSCCSEEEEEECCSCG---------------------------GGTHHHHHHHEEEEEEEEEEESSH
T ss_pred CCHHHcccCCccCEEEECCcCH---------------------------HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 3444444456899999998831 367888889999999999988765
No 71
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=95.90 E-value=0.031 Score=40.80 Aligned_cols=92 Identities=16% Similarity=0.076 Sum_probs=55.2
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCcc-----------
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE----------- 91 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~----------- 91 (139)
..+.||.|++... ......+ ....+|..+.+.|||||+++.++......
T Consensus 99 ~~~~fD~v~~~~~-------------l~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~ 158 (211)
T 3e23_A 99 AIDAYDAVWAHAC-------------LLHVPRD-------ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNY 158 (211)
T ss_dssp CCSCEEEEEECSC-------------GGGSCHH-------HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECC
T ss_pred CCCcEEEEEecCc-------------hhhcCHH-------HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccC
Confidence 4578999997543 1122222 23678899999999999999987765432
Q ss_pred ccHHHHHHHHhhCCC-cEEecCCCcccCCCCCCCCCCcEEEEEEEecC
Q psy15213 92 ESEEQAIIFSKNHKD-SIRLNSPGQLLPTVNKKQDYDGFFYSLFQKRK 138 (139)
Q Consensus 92 ENE~vV~~~l~~~~~-~~~~~~~~~~~P~~~~~~~~~GfFia~l~k~~ 138 (139)
-+.+.+..+++.. + ++.+......-.+. .+....+++++.+.+
T Consensus 159 ~~~~~~~~~l~~a-G~f~~~~~~~~~~~~~---~~~~~~wl~~~~~~~ 202 (211)
T 3e23_A 159 PSEEWLRARYAEA-GTWASVAVESSEGKGF---DQELAQFLHVSVRKP 202 (211)
T ss_dssp CCHHHHHHHHHHH-CCCSEEEEEEEEEECT---TSCEEEEEEEEEECC
T ss_pred CCHHHHHHHHHhC-CCcEEEEEEeccCCCC---CCCCceEEEEEEecC
Confidence 2566777777764 3 44333210111111 334556777777654
No 72
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.89 E-value=0.056 Score=38.12 Aligned_cols=89 Identities=15% Similarity=0.041 Sum_probs=54.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
.+.||.|++.+++- ...+.. ...++|..+.++|+|||.++.++.+... -..+.+...++.
T Consensus 105 ~~~~D~i~~~~~~~------------~~~~~~-------~~~~~l~~~~~~l~~~G~l~~~~~~~~~-~~~~~~~~~l~~ 164 (195)
T 3cgg_A 105 ETDFDLIVSAGNVM------------GFLAED-------GREPALANIHRALGADGRAVIGFGAGRG-WVFGDFLEVAER 164 (195)
T ss_dssp CCCEEEEEECCCCG------------GGSCHH-------HHHHHHHHHHHHEEEEEEEEEEEETTSS-CCHHHHHHHHHH
T ss_pred CCceeEEEECCcHH------------hhcChH-------HHHHHHHHHHHHhCCCCEEEEEeCCCCC-cCHHHHHHHHHH
Confidence 46899999875521 111222 2367889999999999999997765433 234455566655
Q ss_pred CCCcEEecCC--CcccCCCCCCCCCCcEEEEEEEec
Q psy15213 104 HKDSIRLNSP--GQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 104 ~~~~~~~~~~--~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
. +++..... ....|. ....++++.+++|.
T Consensus 165 ~-Gf~~~~~~~~~~~~~~----~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 165 V-GLELENAFESWDLKPF----VQGSEFLVAVFTKK 195 (195)
T ss_dssp H-TEEEEEEESSTTCCBC----CTTCSEEEEEEEEC
T ss_pred c-CCEEeeeecccccCcC----CCCCcEEEEEEecC
Confidence 4 45544321 122232 34578888888874
No 73
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=95.68 E-value=0.011 Score=51.07 Aligned_cols=97 Identities=13% Similarity=0.124 Sum_probs=51.0
Q ss_pred cCCCCcCEEEEcCCCCCccccc--cCCCCCccCCHhH-----HHHHHHHHHHHHHHHHhcccCCcEEEEeccC-CCcc--
Q psy15213 22 YKNKYFDRILADLPCTGSGVVR--RNPDIPWLRRKND-----IKKLSKYSCKILNNLWKMLKPGGKLLFVTCS-LWFE-- 91 (139)
Q Consensus 22 ~~~~~fD~ILlDaPCSg~G~~~--r~p~~~~~~~~~~-----~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS-~~~~-- 91 (139)
....+||.||..||-+....-. ...+.+|...... +..-...+...+.+++.+|++||++++.+=. +...
T Consensus 325 ~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~ 404 (544)
T 3khk_A 325 HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNT 404 (544)
T ss_dssp CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCG
T ss_pred cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCc
Confidence 3456899999999988632111 0011111100000 0001122335788999999999998886522 2222
Q ss_pred ccHHHHHHHHhhCCCc-EEecCCCcccC
Q psy15213 92 ESEEQAIIFSKNHKDS-IRLNSPGQLLP 118 (139)
Q Consensus 92 ENE~vV~~~l~~~~~~-~~~~~~~~~~P 118 (139)
-.+..+.+.|-+...+ .++.+|..+|.
T Consensus 405 ~~~~~iRk~Lle~~~l~aII~LP~~lF~ 432 (544)
T 3khk_A 405 NNEGEIRKTLVEQDLVECMVALPGQLFT 432 (544)
T ss_dssp GGHHHHHHHHHHTTCEEEEEECCTTBCC
T ss_pred chHHHHHHHHHhCCcHhEEEECCCCCCC
Confidence 2455666555444333 24556655555
No 74
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=95.60 E-value=0.027 Score=40.66 Aligned_cols=45 Identities=20% Similarity=0.143 Sum_probs=32.8
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHh--cccCCcEEEEeccCCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWK--MLKPGGKLLFVTCSLW 89 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~--~lk~gG~lvYsTCS~~ 89 (139)
.+.||.|++|+|.. ... ....+++....+ +|+|||.++..+.+-.
T Consensus 111 ~~~fD~i~~~~p~~--------------~~~-------~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 111 TSPVDLVLADPPYN--------------VDS-------ADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp SSCCSEEEECCCTT--------------SCH-------HHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred CCCccEEEECCCCC--------------cch-------hhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 47899999999922 111 234566777777 9999999999776654
No 75
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=95.47 E-value=0.01 Score=47.72 Aligned_cols=48 Identities=27% Similarity=0.317 Sum_probs=30.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
.+.||.|++|++. |. .+. . .-.+.+++..+.+.|+|||.++..+.+..
T Consensus 179 ~~~fD~Ii~d~~~---------~~-----~~~--~--~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 179 KNEFDVIITDSSD---------PV-----GPA--E--SLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp TTCEEEEEECCC-------------------------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred CCCceEEEEcCCC---------CC-----Ccc--h--hhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 4689999999972 10 000 0 01237889999999999999999875543
No 76
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=95.43 E-value=0.024 Score=47.45 Aligned_cols=22 Identities=23% Similarity=0.354 Sum_probs=14.9
Q ss_pred CccccccCCCCcCEEEEcCCCCC
Q psy15213 16 NNRFRFYKNKYFDRILADLPCTG 38 (139)
Q Consensus 16 ~~~~~~~~~~~fD~ILlDaPCSg 38 (139)
.|...+... .||.|++|||.+|
T Consensus 344 ~d~~~~~~~-~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 344 ASDREVSVK-GFDTVIVDPPRAG 365 (425)
T ss_dssp CCTTTCCCT-TCSEEEECCCTTC
T ss_pred CChHHcCcc-CCCEEEEcCCccc
Confidence 344444433 7999999999544
No 77
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=95.36 E-value=0.032 Score=43.54 Aligned_cols=45 Identities=20% Similarity=0.089 Sum_probs=32.4
Q ss_pred cCccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 15 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 15 ~~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
..|...|. +.||.|++|++ +| .. .+..+.+.|+|||+++..+.+.
T Consensus 130 ~~D~~~~~--~~fD~Ii~d~~---------dp--------~~----------~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 130 KQLLDLDI--KKYDLIFCLQE---------PD--------IH----------RIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp SSGGGSCC--CCEEEEEESSC---------CC--------HH----------HHHHHHTTEEEEEEEEEEEECT
T ss_pred echHHHHH--hhCCEEEECCC---------Ch--------HH----------HHHHHHHhcCCCcEEEEEcCCc
Confidence 33444554 67999999964 11 11 6778899999999999987664
No 78
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=95.35 E-value=0.071 Score=38.83 Aligned_cols=66 Identities=20% Similarity=0.320 Sum_probs=42.9
Q ss_pred HHHHHHHHhcccCCcEEEEecc------CCCccccHHHHHHHHhhC-CCcEEecCCCcccCCCCCCCCCCcEEEEEEEec
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTC------SLWFEESEEQAIIFSKNH-KDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTC------S~~~~ENE~vV~~~l~~~-~~~~~~~~~~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
.++|.++.++|||||.++++|. ++....+.+.+..++... ..++.+.. .+. +...+|++++|+|.
T Consensus 134 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-----~~~---~~~~d~~l~~~~~~ 205 (216)
T 3ofk_A 134 RTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALTEVERVQC-----QGQ---SADEDCLLARFRNP 205 (216)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHHSEEEEEEEE-----ECS---STTCEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhhccceEEEec-----cCC---ccccchhHHHHhCC
Confidence 5688999999999999999762 333355566666666543 22222221 112 45688999999875
Q ss_pred C
Q psy15213 138 K 138 (139)
Q Consensus 138 ~ 138 (139)
+
T Consensus 206 ~ 206 (216)
T 3ofk_A 206 E 206 (216)
T ss_dssp C
T ss_pred c
Confidence 4
No 79
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=95.34 E-value=0.052 Score=40.77 Aligned_cols=44 Identities=25% Similarity=0.432 Sum_probs=32.3
Q ss_pred cCccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEec
Q psy15213 15 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 15 ~~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
..|.........||.|++|+|+. .+++.++.++|+|||+++..+
T Consensus 151 ~~d~~~~~~~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 151 LKDIYEGIEEENVDHVILDLPQP---------------------------ERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp CSCGGGCCCCCSEEEEEECSSCG---------------------------GGGHHHHHHHEEEEEEEEEEE
T ss_pred ECchhhccCCCCcCEEEECCCCH---------------------------HHHHHHHHHHcCCCCEEEEEE
Confidence 34444445567899999998821 356888899999999998654
No 80
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=95.32 E-value=0.022 Score=42.53 Aligned_cols=28 Identities=11% Similarity=0.070 Sum_probs=20.6
Q ss_pred CccccccCCCCcCEEEEcCCCCCccccc
Q psy15213 16 NNRFRFYKNKYFDRILADLPCTGSGVVR 43 (139)
Q Consensus 16 ~~~~~~~~~~~fD~ILlDaPCSg~G~~~ 43 (139)
.|...+...+.||.|++|+||.+.+...
T Consensus 134 ~d~~~~~~~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 134 GDFLLLASFLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp SCHHHHGGGCCCSEEEECCCCSSGGGGG
T ss_pred CChHHhcccCCCCEEEECCCcCCcchhh
Confidence 3444444457899999999999877654
No 81
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=95.32 E-value=0.052 Score=40.15 Aligned_cols=35 Identities=29% Similarity=0.582 Sum_probs=27.7
Q ss_pred HHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 67 ILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 67 lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
++..+.+.|||||++++++++. ++...+...+++.
T Consensus 136 ~l~~~~~~LkpgG~lv~~~~~~---~~~~~~~~~l~~~ 170 (204)
T 3njr_A 136 LYDRLWEWLAPGTRIVANAVTL---ESETLLTQLHARH 170 (204)
T ss_dssp HHHHHHHHSCTTCEEEEEECSH---HHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcEEEEEecCc---ccHHHHHHHHHhC
Confidence 7889999999999999999874 4555666666655
No 82
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=95.23 E-value=0.088 Score=41.98 Aligned_cols=65 Identities=17% Similarity=0.115 Sum_probs=39.4
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccH--HHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESE--EQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE--~vV~~~l 101 (139)
...||.|+.|.+|+ .|.. . .+... +...|..+.+.|||||.++.. .+.+++.+ +.+..+.
T Consensus 146 ~~~fD~V~sd~~~~-~g~~--------~--~d~~~-----~l~~L~~~~~~LkpGG~~v~k--v~~~~~~~~~~~l~~l~ 207 (305)
T 2p41_A 146 PERCDTLLCDIGES-SPNP--------T--VEAGR-----TLRVLNLVENWLSNNTQFCVK--VLNPYMSSVIEKMEALQ 207 (305)
T ss_dssp CCCCSEEEECCCCC-CSSH--------H--HHHHH-----HHHHHHHHHHHCCTTCEEEEE--ESCCCSHHHHHHHHHHH
T ss_pred cCCCCEEEECCccc-cCcc--------h--hhHHH-----HHHHHHHHHHHhCCCCEEEEE--eCCCCCchHHHHHHHHH
Confidence 45899999999987 5542 1 11111 124788888999999988763 34443322 4444444
Q ss_pred hhCCC
Q psy15213 102 KNHKD 106 (139)
Q Consensus 102 ~~~~~ 106 (139)
..+..
T Consensus 208 ~~f~~ 212 (305)
T 2p41_A 208 RKHGG 212 (305)
T ss_dssp HHHCC
T ss_pred HHcCC
Confidence 44444
No 83
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=95.17 E-value=0.067 Score=40.19 Aligned_cols=67 Identities=12% Similarity=-0.025 Sum_probs=38.9
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhCCCcEEecCCCcccCCCCCCCCCCcEEEEEEEec
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
...++..+.++|+|||++++..+....+|-++.. ..++.. ++.........+|. .....++.+++|.
T Consensus 153 ~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~-~~l~~~-g~~~~~~~~~~~~~-----~~~~~~l~~~~k~ 219 (240)
T 1xdz_A 153 LSVLSELCLPLVKKNGLFVALKAASAEEELNAGK-KAITTL-GGELENIHSFKLPI-----EESDRNIMVIRKI 219 (240)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHH-HHHHHT-TEEEEEEEEEECTT-----TCCEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHH-HHHHHc-CCeEeEEEEEecCC-----CCCceEEEEEEec
Confidence 3678999999999999999987776655444443 344444 34433221122442 2234555566654
No 84
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.16 E-value=0.017 Score=45.53 Aligned_cols=62 Identities=15% Similarity=0.255 Sum_probs=36.4
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEecc
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTC 86 (139)
+.+.||.|+.|||.-........+... .....-........+++..+.++|||||.++....
T Consensus 37 ~~~s~DlIvtdPPY~~~~~y~~~~~~~--~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 37 PEASVHLVVTSPPYWTLKRYEDTPGQL--GHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CTTCEEEEEECCCCCCCC-------CC--HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCceeEEEECCCCCCccccCCChhhh--cccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 457899999999985433222221110 00112222333456788999999999999877654
No 85
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=95.00 E-value=0.012 Score=43.37 Aligned_cols=43 Identities=23% Similarity=0.179 Sum_probs=30.3
Q ss_pred CCC-cCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHH--HhcccCCcEEEEeccCCC
Q psy15213 24 NKY-FDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL--WKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 24 ~~~-fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a--~~~lk~gG~lvYsTCS~~ 89 (139)
.+. ||.|++|+|.. .+ .. .+++... .++|+|||.+++++|+..
T Consensus 122 ~~~~fD~I~~~~~~~-~~---------------~~-------~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 122 NQPHFDVVFLDPPFH-FN---------------LA-------EQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp SSCCEEEEEECCCSS-SC---------------HH-------HHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred cCCCCCEEEECCCCC-Cc---------------cH-------HHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 357 99999999932 11 11 2334444 567999999999999876
No 86
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=94.95 E-value=0.02 Score=47.20 Aligned_cols=51 Identities=24% Similarity=0.324 Sum_probs=38.7
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCcc
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE 91 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ 91 (139)
.+.||.|++++|....+.. . .....+++..+.+.|||||+++.+++...+.
T Consensus 296 ~~~fD~Ii~npp~~~~~~~----------~-------~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~ 346 (381)
T 3dmg_A 296 EARFDIIVTNPPFHVGGAV----------I-------LDVAQAFVNVAAARLRPGGVFFLVSNPFLKY 346 (381)
T ss_dssp TCCEEEEEECCCCCTTCSS----------C-------CHHHHHHHHHHHHHEEEEEEEEEEECTTSCH
T ss_pred CCCeEEEEECCchhhcccc----------c-------HHHHHHHHHHHHHhcCcCcEEEEEEcCCCCh
Confidence 3689999999996543221 1 1234678999999999999999998887754
No 87
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.93 E-value=0.016 Score=44.95 Aligned_cols=57 Identities=16% Similarity=0.290 Sum_probs=37.4
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccC
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..+.||.|++|||...... .+. ......+.......+|..+.++|++||.++...|.
T Consensus 20 ~~~~vdlI~~DPPY~~~~~-------~~d-~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d 76 (260)
T 1g60_A 20 ENKSVQLAVIDPPYNLSKA-------DWD-SFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP 76 (260)
T ss_dssp CTTCEEEEEECCCCSSCSS-------GGG-CCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH
T ss_pred cccccCEEEECCCCCCCcc-------ccc-ccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc
Confidence 3468999999999742200 010 00133445556677888888999999998876654
No 88
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=94.91 E-value=0.039 Score=40.62 Aligned_cols=51 Identities=18% Similarity=0.267 Sum_probs=33.5
Q ss_pred cCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEecc
Q psy15213 22 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 22 ~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTC 86 (139)
...+.||.|+++.| +|..+..-.+.. -.+..+|..+.++|+|||.++.+|-
T Consensus 107 ~~~~~~D~i~~~~~---------~~~~~~~~~~~~-----~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 107 FEDGEIDRLYLNFS---------DPWPKKRHEKRR-----LTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp SCTTCCSEEEEESC---------CCCCSGGGGGGS-----TTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred cCCCCCCEEEEECC---------CCccccchhhhc-----cCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 34568999999977 221111000011 1367899999999999999988763
No 89
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=94.90 E-value=0.0064 Score=47.41 Aligned_cols=41 Identities=17% Similarity=0.228 Sum_probs=30.0
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCcc
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE 91 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ 91 (139)
...||.|++|+|. ...+++..+++.|+|||+++ .+|.....
T Consensus 184 ~~~~D~Vi~d~p~--------------------------~~~~~l~~~~~~LkpgG~l~-~s~~~~~~ 224 (272)
T 3a27_A 184 KDVADRVIMGYVH--------------------------KTHKFLDKTFEFLKDRGVIH-YHETVAEK 224 (272)
T ss_dssp TTCEEEEEECCCS--------------------------SGGGGHHHHHHHEEEEEEEE-EEEEEEGG
T ss_pred cCCceEEEECCcc--------------------------cHHHHHHHHHHHcCCCCEEE-EEEcCccc
Confidence 4689999999992 11346788889999998776 45655533
No 90
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=94.90 E-value=0.089 Score=43.67 Aligned_cols=77 Identities=18% Similarity=0.339 Sum_probs=41.5
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
+.||.|++|||.+|.. +-+. .|. .++| +.+||.+|... .-..-...+++.
T Consensus 355 ~~fD~Vv~dPPr~g~~--------------~~~~-------~l~-----~~~p-~~ivyvsc~p~--tlard~~~l~~~- 404 (433)
T 1uwv_A 355 NGFDKVLLDPARAGAA--------------GVMQ-------QII-----KLEP-IRIVYVSCNPA--TLARDSEALLKA- 404 (433)
T ss_dssp TCCSEEEECCCTTCCH--------------HHHH-------HHH-----HHCC-SEEEEEESCHH--HHHHHHHHHHHT-
T ss_pred CCCCEEEECCCCccHH--------------HHHH-------HHH-----hcCC-CeEEEEECChH--HHHhhHHHHHHC-
Confidence 5799999999965541 1111 111 1456 47899998533 222233444433
Q ss_pred CCcEEec-CCCcccCCCCCCCCCCcEEEEEEEec
Q psy15213 105 KDSIRLN-SPGQLLPTVNKKQDYDGFFYSLFQKR 137 (139)
Q Consensus 105 ~~~~~~~-~~~~~~P~~~~~~~~~GfFia~l~k~ 137 (139)
++.+.. .+..+||++ +-.+ -+|+|+|.
T Consensus 405 -Gy~~~~~~~~d~Fp~t---~HvE--~v~ll~r~ 432 (433)
T 1uwv_A 405 -GYTIARLAMLDMFPHT---GHLE--SMVLFSRV 432 (433)
T ss_dssp -TCEEEEEEEECCSTTS---SCCE--EEEEEEC-
T ss_pred -CcEEEEEEEeccCCCC---CeEE--EEEEEEEC
Confidence 344333 234678877 3333 26777664
No 91
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=94.71 E-value=0.069 Score=39.90 Aligned_cols=40 Identities=23% Similarity=0.236 Sum_probs=30.9
Q ss_pred cCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 22 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 22 ~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
...+.||.|++|+|.. .++|.++.++|+|||+++..+.+.
T Consensus 162 ~~~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 162 LEEAAYDGVALDLMEP---------------------------WKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp CCTTCEEEEEEESSCG---------------------------GGGHHHHHHHEEEEEEEEEEESCH
T ss_pred CCCCCcCEEEECCcCH---------------------------HHHHHHHHHhCCCCCEEEEEeCCH
Confidence 3446899999998710 367888899999999999877554
No 92
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=94.66 E-value=0.095 Score=41.83 Aligned_cols=66 Identities=12% Similarity=0.127 Sum_probs=40.7
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
..||.|+.|+++...|....+.. .. ..+..++|..+.+.|||||+++..+- .....+ .+.++++.+
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~----~~-------~~l~~~~l~~a~r~LkpGG~~v~~~~--~~~~~~-~l~~~l~~~ 187 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKEND----SK-------EGFFTYLCGFIKQKLALGGSIAVKIT--EHSWNA-DLYKLMGHF 187 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCC----CC-------CTHHHHHHHHHHHHEEEEEEEEEEEC--SSSCCH-HHHHHHTTE
T ss_pred CcccEEEEcCCcccccccccccc----ch-------HHHHHHHHHHHHHhcCCCcEEEEEEe--ccCCHH-HHHHHHHHc
Confidence 57999999988776665432211 00 12235889999999999999998642 223333 445556654
No 93
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=94.65 E-value=0.056 Score=40.19 Aligned_cols=39 Identities=21% Similarity=0.333 Sum_probs=29.6
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
....||.|++|+| +| ...+.++.++|+|||+++..+-+.
T Consensus 155 ~~~~~D~v~~~~~---------~~------------------~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 155 PEGIFHAAFVDVR---------EP------------------WHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp CTTCBSEEEECSS---------CG------------------GGGHHHHHHHBCTTCEEEEEESSH
T ss_pred CCCcccEEEECCc---------CH------------------HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 4568999999877 11 244778889999999999877543
No 94
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.57 E-value=0.029 Score=45.56 Aligned_cols=58 Identities=17% Similarity=0.083 Sum_probs=44.2
Q ss_pred CCCcCEEEEcC--CCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHH
Q psy15213 24 NKYFDRILADL--PCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDa--PCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l 101 (139)
...||.|.+|+ | .++|+ .|+ .+++....++++|||+++.-||+ ..|.+.|
T Consensus 184 ~~~~Da~flDgFsP-------~kNPe---LWs-----------~e~f~~l~~~~~pgg~laTYtaa-------g~VRR~L 235 (308)
T 3vyw_A 184 NFKADAVFHDAFSP-------YKNPE---LWT-----------LDFLSLIKERIDEKGYWVSYSSS-------LSVRKSL 235 (308)
T ss_dssp SCCEEEEEECCSCT-------TTSGG---GGS-----------HHHHHHHHTTEEEEEEEEESCCC-------HHHHHHH
T ss_pred ccceeEEEeCCCCc-------ccCcc---cCC-----------HHHHHHHHHHhCCCcEEEEEeCc-------HHHHHHH
Confidence 35799999997 5 56666 233 56888888999999999987776 6788888
Q ss_pred hhCCCcEEe
Q psy15213 102 KNHKDSIRL 110 (139)
Q Consensus 102 ~~~~~~~~~ 110 (139)
... +|.+.
T Consensus 236 ~~a-GF~V~ 243 (308)
T 3vyw_A 236 LTL-GFKVG 243 (308)
T ss_dssp HHT-TCEEE
T ss_pred HHC-CCEEE
Confidence 875 55543
No 95
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=94.50 E-value=0.0084 Score=45.56 Aligned_cols=47 Identities=28% Similarity=0.349 Sum_probs=32.7
Q ss_pred cCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEec
Q psy15213 22 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 22 ~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
.....||.|+.|+.-+..... .. ..+...+..+.++|||||+++|.+
T Consensus 124 ~~~~~FD~i~~D~~~~~~~~~----------~~-------~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 124 LPDGHFDGILYDTYPLSEETW----------HT-------HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp SCTTCEEEEEECCCCCBGGGT----------TT-------HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccccCCceEEEeeeecccchh----------hh-------cchhhhhhhhhheeCCCCEEEEEe
Confidence 345789999999873333221 11 123567888999999999999964
No 96
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=94.44 E-value=0.073 Score=38.66 Aligned_cols=52 Identities=19% Similarity=0.282 Sum_probs=38.8
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
..||.|+++.+.. ...+++..+.++|+|||++++++++. ++.+.+...+++.
T Consensus 107 ~~~D~i~~~~~~~-------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~~~ 158 (204)
T 3e05_A 107 PDPDRVFIGGSGG-------------------------MLEEIIDAVDRRLKSEGVIVLNAVTL---DTLTKAVEFLEDH 158 (204)
T ss_dssp CCCSEEEESCCTT-------------------------CHHHHHHHHHHHCCTTCEEEEEECBH---HHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCc-------------------------CHHHHHHHHHHhcCCCeEEEEEeccc---ccHHHHHHHHHHC
Confidence 5799999998721 12478999999999999999987765 3455556666655
No 97
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=94.35 E-value=0.047 Score=47.24 Aligned_cols=95 Identities=16% Similarity=0.098 Sum_probs=49.9
Q ss_pred CCCcCEEEEcCCCCCcccccc--CCCCCccCCHhHHHHHHHHHHHHHHHHHhccc-CCcEEEEeccCC-Ccccc-HHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRR--NPDIPWLRRKNDIKKLSKYSCKILNNLWKMLK-PGGKLLFVTCSL-WFEES-EEQAI 98 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r--~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk-~gG~lvYsTCS~-~~~EN-E~vV~ 98 (139)
..+||.|+..||-++...-.. ..+.+|.. ...+..-...+...+.+++.+|+ +||++++.+=.- ....+ +..+.
T Consensus 295 ~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~-~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iR 373 (542)
T 3lkd_A 295 PTNFDGVLMNPPYSAKWSASSGFMDDPRFSP-FGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIR 373 (542)
T ss_dssp CCCBSEEEECCCTTCCCCCCGGGGGSTTTGG-GSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHH
T ss_pred cccccEEEecCCcCCccccchhhhhhhhhhh-hhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHH
Confidence 568999999999985421110 00111110 00000011223458999999999 999997755332 22223 45555
Q ss_pred HHHhhCCCcE-EecCCCcccCC
Q psy15213 99 IFSKNHKDSI-RLNSPGQLLPT 119 (139)
Q Consensus 99 ~~l~~~~~~~-~~~~~~~~~P~ 119 (139)
+.|-+...+. ++.+|..+|.+
T Consensus 374 k~Lle~~~l~~II~LP~~lF~~ 395 (542)
T 3lkd_A 374 KALLEEGAIDTVIGLPANIFFN 395 (542)
T ss_dssp HHHHHTTCEEEEEECCSSCSSS
T ss_pred HHHHhCCceeEEEEccccccCC
Confidence 5544433433 45566555553
No 98
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=94.33 E-value=0.059 Score=37.80 Aligned_cols=37 Identities=27% Similarity=0.446 Sum_probs=27.4
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
.+++..+.++|||||++++++++. ++...+..+++++
T Consensus 107 ~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 107 PGVFAAAWKRLPVGGRLVANAVTV---ESEQMLWALRKQF 143 (178)
T ss_dssp TTHHHHHHHTCCTTCEEEEEECSH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEEeecc---ccHHHHHHHHHHc
Confidence 567888999999999999988765 3344555555554
No 99
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.31 E-value=0.032 Score=45.79 Aligned_cols=58 Identities=16% Similarity=0.203 Sum_probs=38.1
Q ss_pred ccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCcc
Q psy15213 17 NRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE 91 (139)
Q Consensus 17 ~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ 91 (139)
|.......+.||.|++|||......+ . . ....+++..+.+.|||||+++.++.+..+.
T Consensus 283 D~~~~~~~~~fD~Ii~nppfh~~~~~----------~-~------~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~ 340 (375)
T 4dcm_A 283 NALSGVEPFRFNAVLCNPPFHQQHAL----------T-D------NVAWEMFHHARRCLKINGELYIVANRHLDY 340 (375)
T ss_dssp STTTTCCTTCEEEEEECCCC------------------C------CHHHHHHHHHHHHEEEEEEEEEEEETTSCH
T ss_pred hhhccCCCCCeeEEEECCCcccCccc----------C-H------HHHHHHHHHHHHhCCCCcEEEEEEECCcCH
Confidence 33334455789999999995321111 0 0 122368999999999999999987776654
No 100
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=94.29 E-value=0.035 Score=45.22 Aligned_cols=58 Identities=17% Similarity=0.199 Sum_probs=38.6
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
+.||.|++|||..- .......+..++.+++..+.+.+ ||.++|.|| +.+.++..+.+.
T Consensus 285 ~~fD~Ii~npPyg~--------------r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~------~~~~~~~~~~~~ 342 (373)
T 3tm4_A 285 DSVDFAISNLPYGL--------------KIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT------EKKAIEEAIAEN 342 (373)
T ss_dssp SCEEEEEEECCCC--------------------CCHHHHHHHHHHHHHHHE--EEEEEEEES------CHHHHHHHHHHT
T ss_pred CCcCEEEECCCCCc--------------ccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC------CHHHHHHHHHHc
Confidence 68999999999421 11112234566888999998888 788899888 344555566553
No 101
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=94.28 E-value=0.067 Score=38.79 Aligned_cols=55 Identities=15% Similarity=0.135 Sum_probs=36.2
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
..||.|++|||+.... + ....++|..+.+.+ || +|++| +.+.++.+.+..++.+.
T Consensus 111 ~~~D~v~~~~p~~~~~---~-----------------~~~~~~l~~~~~~l--~~--~~~~~-~~~~~~~~~~~~~l~~~ 165 (207)
T 1wy7_A 111 SRVDIVIMNPPFGSQR---K-----------------HADRPFLLKAFEIS--DV--VYSIH-LAKPEVRRFIEKFSWEH 165 (207)
T ss_dssp CCCSEEEECCCCSSSS---T-----------------TTTHHHHHHHHHHC--SE--EEEEE-ECCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEcCCCcccc---C-----------------CchHHHHHHHHHhc--Cc--EEEEE-eCCcCCHHHHHHHHHHC
Confidence 4899999999964321 0 11235577777776 43 77888 34556777777888765
No 102
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.28 E-value=0.048 Score=43.71 Aligned_cols=58 Identities=10% Similarity=0.158 Sum_probs=39.8
Q ss_pred cCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccC
Q psy15213 22 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 22 ~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
...+.||.|+.|||......- .+ .............+.|..+.++|+|||.++.....
T Consensus 29 l~~~svDlI~tDPPY~~~~~~------~y--~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 29 FPEESISLVMTSPPFALQRKK------EY--GNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SCSSCEEEEEECCCCSSSCSC------SS--CSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCCCeeEEEECCCCCCCccc------cc--CCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 345689999999997533210 11 11234555666778888999999999999876553
No 103
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=94.25 E-value=0.048 Score=38.62 Aligned_cols=46 Identities=17% Similarity=0.073 Sum_probs=30.0
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCc
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~ 90 (139)
.+.||.|++|+|.. ....... ... + .+.++|+|||.+++++++...
T Consensus 114 ~~~fD~i~~~~~~~-------------~~~~~~~------~~~-l-~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 114 KLQFDLVLLDPPYA-------------KQEIVSQ------LEK-M-LERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp TCCEEEEEECCCGG-------------GCCHHHH------HHH-H-HHTTCEEEEEEEEEEEETTCC
T ss_pred CCCCCEEEECCCCC-------------chhHHHH------HHH-H-HHhcccCCCCEEEEEeCCccc
Confidence 46899999999921 0111111 111 1 247889999999999988764
No 104
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=93.88 E-value=0.041 Score=40.51 Aligned_cols=44 Identities=14% Similarity=0.028 Sum_probs=29.0
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHH--HhcccCCcEEEEeccCCCc
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNL--WKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a--~~~lk~gG~lvYsTCS~~~ 90 (139)
.+.||.|++|+|.. .+ .. .+++... .++|+|||++++++|+...
T Consensus 120 ~~~fD~V~~~~p~~-~~---------------~~-------~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 120 GTPHNIVFVDPPFR-RG---------------LL-------EETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp CCCEEEEEECCSSS-TT---------------TH-------HHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred CCCCCEEEECCCCC-CC---------------cH-------HHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 45899999999932 10 01 1223333 3469999999999987654
No 105
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=93.82 E-value=0.022 Score=45.46 Aligned_cols=49 Identities=24% Similarity=0.389 Sum_probs=32.0
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.+.||.|++|++-.. +. ..| ...+ .+.+.+..+.+.|+|||.++..+.+
T Consensus 149 ~~~fD~Ii~d~~~~~-~~--~~~-------~~~l-----~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 149 EERYDVVIIDLTDPV-GE--DNP-------ARLL-----YTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp CCCEEEEEEECCCCB-ST--TCG-------GGGG-----SSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCCccEEEECCCCcc-cc--cCc-------chhc-----cHHHHHHHHHHhcCCCcEEEEEccC
Confidence 468999999987311 00 000 0010 1367888899999999999987654
No 106
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=93.70 E-value=0.059 Score=38.13 Aligned_cols=19 Identities=11% Similarity=-0.060 Sum_probs=16.1
Q ss_pred HhcccCCcEEEEeccCCCc
Q psy15213 72 WKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 72 ~~~lk~gG~lvYsTCS~~~ 90 (139)
.++|+|||.++.++++-..
T Consensus 125 ~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 125 KNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp TTCEEEEEEEEEEEETTCC
T ss_pred CCCcCCCcEEEEEECCccc
Confidence 5899999999998887654
No 107
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=93.58 E-value=0.06 Score=40.70 Aligned_cols=72 Identities=17% Similarity=0.187 Sum_probs=42.7
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhCCCcEEecCC--------CcccCCCC----CCCCCCcEEE
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNSP--------GQLLPTVN----KKQDYDGFFY 131 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~~~~~~~~~~--------~~~~P~~~----~~~~~~GfFi 131 (139)
|.++|..+.++|+|||.|+.+|- .++-.+.+...+..++.++.+... ..+.|... ....+...|.
T Consensus 152 ~~~~l~~~~~~LkpgG~l~~~td---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~t~~e~k~~~~g~~~~~ 228 (246)
T 2vdv_E 152 TNTLLSEYAYVLKEGGVVYTITD---VKDLHEWMVKHLEEHPLFERLSKEWEENDECVKIMRNATEEGKKVERKKGDKFV 228 (246)
T ss_dssp CHHHHHHHHHHEEEEEEEEEEES---CHHHHHHHHHHHHHSTTEEECCHHHHHTCHHHHHHHHSSHHHHHHHHTTCCCEE
T ss_pred cHHHHHHHHHHcCCCCEEEEEec---cHHHHHHHHHHHHhCcCeEecCccccccCcccccCCCCCHHHHHHHHCCCCeEE
Confidence 47899999999999999998652 222233344445566655544221 01122110 0123668899
Q ss_pred EEEEecC
Q psy15213 132 SLFQKRK 138 (139)
Q Consensus 132 a~l~k~~ 138 (139)
++|+|..
T Consensus 229 ~~~~k~~ 235 (246)
T 2vdv_E 229 ACFTRLP 235 (246)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999874
No 108
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=93.57 E-value=0.52 Score=34.70 Aligned_cols=75 Identities=12% Similarity=0.086 Sum_probs=46.2
Q ss_pred cCccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCcc---
Q psy15213 15 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE--- 91 (139)
Q Consensus 15 ~~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~--- 91 (139)
..|...+.....||.|+.-.. .....+.+ ...+|..+.++|||||+++..+.+....
T Consensus 121 ~~d~~~~~~~~~fD~v~~~~~-------------l~~~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 180 (235)
T 3lcc_A 121 KEDVFTWRPTELFDLIFDYVF-------------FCAIEPEM-------RPAWAKSMYELLKPDGELITLMYPITDHVGG 180 (235)
T ss_dssp CCCTTTCCCSSCEEEEEEESS-------------TTTSCGGG-------HHHHHHHHHHHEEEEEEEEEEECCCSCCCSC
T ss_pred ECchhcCCCCCCeeEEEEChh-------------hhcCCHHH-------HHHHHHHHHHHCCCCcEEEEEEecccccCCC
Confidence 334444444568999986432 11122222 2577889999999999999876655432
Q ss_pred ----ccHHHHHHHHhhCCCcEEe
Q psy15213 92 ----ESEEQAIIFSKNHKDSIRL 110 (139)
Q Consensus 92 ----ENE~vV~~~l~~~~~~~~~ 110 (139)
-..+.+..+++.. +++.+
T Consensus 181 ~~~~~~~~~~~~~l~~~-Gf~~~ 202 (235)
T 3lcc_A 181 PPYKVDVSTFEEVLVPI-GFKAV 202 (235)
T ss_dssp SSCCCCHHHHHHHHGGG-TEEEE
T ss_pred CCccCCHHHHHHHHHHc-CCeEE
Confidence 2456677777764 55544
No 109
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=93.44 E-value=0.066 Score=37.67 Aligned_cols=52 Identities=21% Similarity=0.277 Sum_probs=36.4
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
..||.|+++.+. .+ ..+++..+.++|+|||.+++++++. . +...+..++++.
T Consensus 99 ~~~D~v~~~~~~------------------~~-------~~~~l~~~~~~l~~gG~l~~~~~~~--~-~~~~~~~~l~~~ 150 (192)
T 1l3i_A 99 PDIDIAVVGGSG------------------GE-------LQEILRIIKDKLKPGGRIIVTAILL--E-TKFEAMECLRDL 150 (192)
T ss_dssp CCEEEEEESCCT------------------TC-------HHHHHHHHHHTEEEEEEEEEEECBH--H-HHHHHHHHHHHT
T ss_pred CCCCEEEECCch------------------HH-------HHHHHHHHHHhcCCCcEEEEEecCc--c-hHHHHHHHHHHC
Confidence 589999998762 01 1578899999999999999988763 2 333344555543
No 110
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=93.42 E-value=0.099 Score=39.76 Aligned_cols=38 Identities=24% Similarity=0.509 Sum_probs=30.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
...||.|++|+| +| .++|.++.++|+|||+++.++.+.
T Consensus 169 ~~~~D~v~~~~~---------~~------------------~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 169 DGSVDRAVLDML---------AP------------------WEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp TTCEEEEEEESS---------CG------------------GGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CCceeEEEECCc---------CH------------------HHHHHHHHHhCCCCCEEEEEeCCH
Confidence 468999999887 11 146888899999999999988754
No 111
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=93.28 E-value=0.065 Score=37.26 Aligned_cols=46 Identities=11% Similarity=0.093 Sum_probs=29.9
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccc
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEE 92 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~E 92 (139)
+.||.|++|+|.. +. ..+ ....+.. .++|+|||.++.++.+.....
T Consensus 109 ~~~D~i~~~~~~~--~~-----------~~~-------~~~~~~~--~~~L~~gG~~~~~~~~~~~~~ 154 (171)
T 1ws6_A 109 ERFTVAFMAPPYA--MD-----------LAA-------LFGELLA--SGLVEAGGLYVLQHPKDLYLP 154 (171)
T ss_dssp CCEEEEEECCCTT--SC-----------TTH-------HHHHHHH--HTCEEEEEEEEEEEETTSCCT
T ss_pred CceEEEEECCCCc--hh-----------HHH-------HHHHHHh--hcccCCCcEEEEEeCCccCCc
Confidence 4799999999954 11 001 1122222 589999999999888766543
No 112
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=93.26 E-value=0.041 Score=44.60 Aligned_cols=64 Identities=19% Similarity=0.314 Sum_probs=38.9
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCc--cccHHHHHHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWF--EESEEQAIIFS 101 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~--~ENE~vV~~~l 101 (139)
.+.||.|++|++- |. .. ... -.+.+++..+.++|+|||.++..+.+... ..-...++.+-
T Consensus 192 ~~~fDlIi~d~~~---------p~---~~-~~~-----l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~ 253 (334)
T 1xj5_A 192 EGSYDAVIVDSSD---------PI---GP-AKE-----LFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCR 253 (334)
T ss_dssp TTCEEEEEECCCC---------TT---SG-GGG-----GGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHH
T ss_pred CCCccEEEECCCC---------cc---Cc-chh-----hhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHH
Confidence 3689999999861 11 00 011 12467888999999999999997655432 22233444443
Q ss_pred hhCC
Q psy15213 102 KNHK 105 (139)
Q Consensus 102 ~~~~ 105 (139)
+.++
T Consensus 254 ~~F~ 257 (334)
T 1xj5_A 254 EIFK 257 (334)
T ss_dssp HHCS
T ss_pred HhCc
Confidence 4444
No 113
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=93.18 E-value=0.26 Score=40.15 Aligned_cols=94 Identities=15% Similarity=0.126 Sum_probs=55.0
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
.++|.|+.|.- |..+...=..=.......|. ++..|+..|+|||.+|--.=-....+-|+++..+.+.+
T Consensus 205 ~k~DvV~SDMA----------pn~sGh~yqQC~DHarii~L-al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F 273 (320)
T 2hwk_A 205 PKYDIIFVNVR----------TPYKYHHYQQCEDHAIKLSM-LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQF 273 (320)
T ss_dssp CCEEEEEEECC----------CCCCSCHHHHHHHHHHHHHH-THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTE
T ss_pred CcCCEEEEcCC----------CCCCCccccccchHHHHHHH-HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhc
Confidence 57999999965 22221110100222333333 99999999999999986554444445566766666665
Q ss_pred CCcEEecCCCcccCCCCCCCCCCcEEEEEEEe
Q psy15213 105 KDSIRLNSPGQLLPTVNKKQDYDGFFYSLFQK 136 (139)
Q Consensus 105 ~~~~~~~~~~~~~P~~~~~~~~~GfFia~l~k 136 (139)
..+..+. |..+. ..++=||+|.=.|
T Consensus 274 ~~Vr~vK------P~ASR-~StEvf~La~gf~ 298 (320)
T 2hwk_A 274 KFSRVCK------PKSSL-EETEVLFVFIGYD 298 (320)
T ss_dssp EEEEEEC------CTTCC-STTCEEEEEEEEC
T ss_pred ceeeeeC------CCCcc-ccceEEEEEEeec
Confidence 4443332 22211 2567888887544
No 114
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=93.04 E-value=0.16 Score=37.60 Aligned_cols=50 Identities=16% Similarity=0.366 Sum_probs=32.4
Q ss_pred cCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEec
Q psy15213 22 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 22 ~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
.....||.|++..|. |. .+......++ .|..+|..+.+.|||||.++++|
T Consensus 104 ~~~~~~d~v~~~~~~---------p~---~~~~~~~~rl--~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 104 FEPGEVKRVYLNFSD---------PW---PKKRHEKRRL--TYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCTTSCCEEEEESCC---------CC---CSGGGGGGST--TSHHHHHHHHHHHTTSCEEEEEE
T ss_pred cCcCCcCEEEEECCC---------CC---cCcccccccc--CcHHHHHHHHHHcCCCCEEEEEe
Confidence 345689999987652 21 1111111111 26788999999999999999976
No 115
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=92.80 E-value=0.051 Score=42.53 Aligned_cols=57 Identities=21% Similarity=0.275 Sum_probs=38.4
Q ss_pred CcCEEEEcC--CCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 26 YFDRILADL--PCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 26 ~fD~ILlDa--PCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
.||.|++|+ | .++|+ .|+ .++|....++|+|||+|+.-|++ ..|.+.|..
T Consensus 173 ~~D~iflD~fsp-------~~~p~---lw~-----------~~~l~~l~~~L~pGG~l~tysaa-------~~vrr~L~~ 224 (257)
T 2qy6_A 173 KVDAWFLDGFAP-------AKNPD---MWT-----------QNLFNAMARLARPGGTLATFTSA-------GFVRRGLQE 224 (257)
T ss_dssp CEEEEEECSSCT-------TTCGG---GCC-----------HHHHHHHHHHEEEEEEEEESCCB-------HHHHHHHHH
T ss_pred eEEEEEECCCCc-------ccChh---hcC-----------HHHHHHHHHHcCCCcEEEEEeCC-------HHHHHHHHH
Confidence 799999998 5 22342 122 46788888999999999854442 366777766
Q ss_pred CCCcEEec
Q psy15213 104 HKDSIRLN 111 (139)
Q Consensus 104 ~~~~~~~~ 111 (139)
. +|.+..
T Consensus 225 a-GF~v~~ 231 (257)
T 2qy6_A 225 A-GFTMQK 231 (257)
T ss_dssp H-TEEEEE
T ss_pred C-CCEEEe
Confidence 3 565443
No 116
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=92.80 E-value=0.29 Score=44.81 Aligned_cols=89 Identities=8% Similarity=0.012 Sum_probs=49.6
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHH--------------HHHHHHHHHHHHhcccCCcEEEEeccC-C
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKL--------------SKYSCKILNNLWKMLKPGGKLLFVTCS-L 88 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l--------------~~~Q~~lL~~a~~~lk~gG~lvYsTCS-~ 88 (139)
...||.|+.+||.++....... .......+ ...+..++.+|+.+|++||++++.+=+ +
T Consensus 397 ~~kFDVVIgNPPYg~~~~~~~e-------~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 397 FANVSVVVMNPPYVSGVTDPAI-------KRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp GTTEEEEEECCBCCSSCCCHHH-------HHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred cCCCCEEEECCCccccccchhh-------hhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH
Confidence 4689999999998643211000 00000111 124677899999999999999986543 2
Q ss_pred Cccc--cHHHHHHHHhhCCCc-EEecCCC-cccCC
Q psy15213 89 WFEE--SEEQAIIFSKNHKDS-IRLNSPG-QLLPT 119 (139)
Q Consensus 89 ~~~E--NE~vV~~~l~~~~~~-~~~~~~~-~~~P~ 119 (139)
.... .+..+.+.|-+...+ .++.+|. .+|+.
T Consensus 470 Lf~sg~~~kkLRk~LLe~~~I~aIIdLP~~~~F~~ 504 (878)
T 3s1s_A 470 LTAQGNESKAFREFLVGNFGLEHIFLYPREGLFEE 504 (878)
T ss_dssp HHCCSHHHHHHHHHHTTTTCEEEEEECCBCCSSCS
T ss_pred hccCChHHHHHHHHHHhCCCeEEEEECCCccccCC
Confidence 2212 244555554433333 3445553 55653
No 117
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=92.67 E-value=0.3 Score=36.28 Aligned_cols=20 Identities=20% Similarity=0.243 Sum_probs=17.4
Q ss_pred HHHHHHHhcccCCcEEEEec
Q psy15213 66 KILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 66 ~lL~~a~~~lk~gG~lvYsT 85 (139)
.+|.++.++|||||+++++.
T Consensus 142 ~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 142 ILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEE
Confidence 35888999999999999984
No 118
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=92.38 E-value=0.59 Score=33.82 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=21.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~ 90 (139)
..+|..+.+.|||||.++.++.....
T Consensus 125 ~~~l~~~~~~LkpgG~l~i~~~~~~~ 150 (220)
T 3hnr_A 125 NVAIAKYSQLLNKGGKIVFADTIFAD 150 (220)
T ss_dssp HHHHHHHHHHSCTTCEEEEEEECBSS
T ss_pred HHHHHHHHHhcCCCCEEEEEeccccC
Confidence 56889999999999999998755443
No 119
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=92.13 E-value=0.11 Score=41.57 Aligned_cols=51 Identities=20% Similarity=0.324 Sum_probs=37.7
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCcc
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE 91 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ 91 (139)
.+.||.|++++|... |. ..-.....+++..+.+.|||||.++..+.+..+.
T Consensus 259 ~~~fD~Iv~~~~~~~-g~----------------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 309 (343)
T 2pjd_A 259 KGRFDMIISNPPFHD-GM----------------QTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPY 309 (343)
T ss_dssp CSCEEEEEECCCCCS-SS----------------HHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSH
T ss_pred cCCeeEEEECCCccc-Cc----------------cCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCc
Confidence 468999999999321 00 0112345788999999999999999999887764
No 120
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=92.02 E-value=1 Score=32.68 Aligned_cols=23 Identities=9% Similarity=0.144 Sum_probs=19.0
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.++|..+.+.|||||.++.+.+.
T Consensus 121 ~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 121 QAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp HHHHHHHHTTTCCSEEEEEEEBG
T ss_pred HHHHHHHHHhhCCCEEEEEccch
Confidence 57899999999999977776554
No 121
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.88 E-value=0.058 Score=43.45 Aligned_cols=55 Identities=16% Similarity=0.163 Sum_probs=34.7
Q ss_pred cCCCCcCEEEEcCCCCCc-cccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 22 YKNKYFDRILADLPCTGS-GVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 22 ~~~~~fD~ILlDaPCSg~-G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
...+.||.|+.|||.-.. +.+ . ........-...|..+.++|++||.++.. |+..
T Consensus 54 l~~~svDlI~tDPPY~~~~d~~--------~----~~~~~~~~~~~~l~~~~rvLk~~G~i~i~-~~~~ 109 (319)
T 1eg2_A 54 LPDDSVQLIICDPPYNIMLADW--------D----DHMDYIGWAKRWLAEAERVLSPTGSIAIF-GGLQ 109 (319)
T ss_dssp SCTTCEEEEEECCCSBCCGGGG--------G----TCSSHHHHHHHHHHHHHHHEEEEEEEEEE-ECSC
T ss_pred CccCCcCEEEECCCCCCCCCCc--------c----CHHHHHHHHHHHHHHHHHHcCCCeEEEEE-cCcc
Confidence 345689999999997432 211 1 01122334456777788999999988764 4433
No 122
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=91.87 E-value=0.49 Score=33.87 Aligned_cols=45 Identities=16% Similarity=-0.086 Sum_probs=32.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCc------------cccHHHHHHHHhhCCCcEEe
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWF------------EESEEQAIIFSKNHKDSIRL 110 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~------------~ENE~vV~~~l~~~~~~~~~ 110 (139)
..+|.++.+.|||||.++.++..... .-..+.+..++++. +++.+
T Consensus 121 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~ 177 (203)
T 3h2b_A 121 PDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETA-GFQVT 177 (203)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHT-TEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHC-CCcEE
Confidence 57788999999999999998865432 12356667777765 56544
No 123
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=91.82 E-value=0.12 Score=37.37 Aligned_cols=58 Identities=14% Similarity=0.109 Sum_probs=40.4
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
.+.||.|+.++|. ....+++..+.++|+|||+++.++... +..+.+...+++
T Consensus 123 ~~~fD~i~~~~~~-------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~ 174 (205)
T 3grz_A 123 DGKFDLIVANILA-------------------------EILLDLIPQLDSHLNEDGQVIFSGIDY---LQLPKIEQALAE 174 (205)
T ss_dssp CSCEEEEEEESCH-------------------------HHHHHHGGGSGGGEEEEEEEEEEEEEG---GGHHHHHHHHHH
T ss_pred CCCceEEEECCcH-------------------------HHHHHHHHHHHHhcCCCCEEEEEecCc---ccHHHHHHHHHH
Confidence 3689999999771 123678999999999999999865442 234555666665
Q ss_pred CCCcEEe
Q psy15213 104 HKDSIRL 110 (139)
Q Consensus 104 ~~~~~~~ 110 (139)
. +++..
T Consensus 175 ~-Gf~~~ 180 (205)
T 3grz_A 175 N-SFQID 180 (205)
T ss_dssp T-TEEEE
T ss_pred c-CCceE
Confidence 4 45443
No 124
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=91.42 E-value=0.64 Score=37.61 Aligned_cols=74 Identities=18% Similarity=0.257 Sum_probs=54.9
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCC-HhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRR-KNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~-~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
.+||.|.++.. - +++-. -.+=++-+..-.-|-..|+..|+|||.++-..=-+...-.|.||..+..+
T Consensus 210 grYDlVfvNv~----------T--pyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARk 277 (324)
T 3trk_A 210 GRYDLVVINIH----------T--PFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRK 277 (324)
T ss_dssp CCEEEEEEECC----------C--CCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTT
T ss_pred CceeEEEEecC----------C--ccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhh
Confidence 68999999987 1 22222 23334444444566778999999999999999999999999999999888
Q ss_pred CCCcEEe
Q psy15213 104 HKDSIRL 110 (139)
Q Consensus 104 ~~~~~~~ 110 (139)
+..+...
T Consensus 278 F~~~rv~ 284 (324)
T 3trk_A 278 FRSSRAL 284 (324)
T ss_dssp EEEEEEE
T ss_pred heeeeee
Confidence 7554433
No 125
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=91.30 E-value=0.2 Score=35.77 Aligned_cols=69 Identities=7% Similarity=0.049 Sum_probs=38.1
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHh
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSK 102 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~ 102 (139)
..+.||.|+.++|-..... +.. +.-.... .+++.+.++.+ |||.++.++.+. .+.+.+..+++
T Consensus 75 ~~~~fD~i~~n~~~~~~~~----~~~-~~~~~~~--------~~~~~~~~~~l-pgG~l~~~~~~~---~~~~~l~~~l~ 137 (170)
T 3q87_B 75 NQESVDVVVFNPPYVPDTD----DPI-IGGGYLG--------REVIDRFVDAV-TVGMLYLLVIEA---NRPKEVLARLE 137 (170)
T ss_dssp CGGGCSEEEECCCCBTTCC----CTT-TBCCGGG--------CHHHHHHHHHC-CSSEEEEEEEGG---GCHHHHHHHHH
T ss_pred ccCCCCEEEECCCCccCCc----ccc-ccCCcch--------HHHHHHHHhhC-CCCEEEEEEecC---CCHHHHHHHHH
Confidence 3478999999998432211 000 1111111 23455555555 999999877554 34455666666
Q ss_pred hCCCcEE
Q psy15213 103 NHKDSIR 109 (139)
Q Consensus 103 ~~~~~~~ 109 (139)
+. ++..
T Consensus 138 ~~-gf~~ 143 (170)
T 3q87_B 138 ER-GYGT 143 (170)
T ss_dssp HT-TCEE
T ss_pred HC-CCcE
Confidence 54 3443
No 126
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=91.23 E-value=0.19 Score=36.07 Aligned_cols=58 Identities=19% Similarity=0.343 Sum_probs=36.1
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.+.||.|+...+-... .......|...... .....++|..+.++|||||+++.++.+.
T Consensus 105 ~~~fD~v~~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 105 SASFDVVLEKGTLDAL---LAGERDPWTVSSEG----VHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp SSCEEEEEEESHHHHH---TTTCSCTTSCCHHH----HHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCcccEEEECcchhhh---ccccccccccccch----hHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 4679999987652111 00011123333222 2345788999999999999999988764
No 127
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=91.15 E-value=0.085 Score=38.97 Aligned_cols=37 Identities=24% Similarity=0.333 Sum_probs=28.0
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEec
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
..||.|++|+| .|+ ....++.++.++|||||+++.+.
T Consensus 142 ~~~D~v~~~~~---------~~~---------------~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 142 PKVDVIFEDVA---------QPT---------------QAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp CCEEEEEECCC---------STT---------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEEECCC---------CHh---------------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 47999999988 110 12345888999999999999874
No 128
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=91.09 E-value=0.24 Score=35.62 Aligned_cols=53 Identities=13% Similarity=0.194 Sum_probs=36.0
Q ss_pred CccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 16 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 16 ~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.|...+...+.||.|++..- + ..... .....+|..+.+.|||||.++.++.+.
T Consensus 97 ~d~~~~~~~~~~D~v~~~~~------l-------~~~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 97 QDLFDWTPDRQWDAVFFAHW------L-------AHVPD-------DRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp CCTTSCCCSSCEEEEEEESC------G-------GGSCH-------HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cccccCCCCCceeEEEEech------h-------hcCCH-------HHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 34444455678999997532 1 11222 124678999999999999999998765
No 129
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=90.90 E-value=0.18 Score=37.62 Aligned_cols=40 Identities=23% Similarity=0.233 Sum_probs=30.3
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
+.||.|++|+. . ... ..++..+.++|+|||+++..++.+.
T Consensus 146 ~~fD~I~~~~~---------------~---~~~-------~~~l~~~~~~L~pgG~lv~~~~~~~ 185 (239)
T 2hnk_A 146 SSIDLFFLDAD---------------K---ENY-------PNYYPLILKLLKPGGLLIADNVLWD 185 (239)
T ss_dssp TCEEEEEECSC---------------G---GGH-------HHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred CCcCEEEEeCC---------------H---HHH-------HHHHHHHHHHcCCCeEEEEEccccC
Confidence 68999999854 0 111 2568888999999999999886554
No 130
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=90.73 E-value=0.28 Score=36.98 Aligned_cols=28 Identities=39% Similarity=0.534 Sum_probs=23.2
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEE 92 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~E 92 (139)
.++|..+.++|||||+++.++.++....
T Consensus 130 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 157 (267)
T 3kkz_A 130 ERGLNEWRKYLKKGGYLAVSECSWFTDE 157 (267)
T ss_dssp HHHHHHHGGGEEEEEEEEEEEEEESSSC
T ss_pred HHHHHHHHHHcCCCCEEEEEEeeecCCC
Confidence 4578999999999999999998755443
No 131
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=90.73 E-value=0.91 Score=34.43 Aligned_cols=70 Identities=19% Similarity=0.092 Sum_probs=42.5
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCCc------------cccHHHHHHHHhhCCCcEEecC---CCcccCCCCCCCCCCc
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLWF------------EESEEQAIIFSKNHKDSIRLNS---PGQLLPTVNKKQDYDG 128 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~~------------~ENE~vV~~~l~~~~~~~~~~~---~~~~~P~~~~~~~~~G 128 (139)
...+|.+..++|||||+++.++..-.. .=.++.+...|... +++.+.. +....+.. .+..+
T Consensus 176 ~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~a-GF~i~~~~~~~~~~~~~~---~~~~~ 251 (263)
T 2a14_A 176 YRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDA-GFDIEQLLHSPQSYSVTN---AANNG 251 (263)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHT-TEEEEEEEEECCCCCTTT---CCCCC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHC-CCEEEEEeeccccccccc---CCCCc
Confidence 357899999999999999999742110 01455666667664 4554332 11111111 34568
Q ss_pred EEEEEEEec
Q psy15213 129 FFYSLFQKR 137 (139)
Q Consensus 129 fFia~l~k~ 137 (139)
+|+.+.+|.
T Consensus 252 ~~~~~a~K~ 260 (263)
T 2a14_A 252 VCCIVARKK 260 (263)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 888888774
No 132
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=90.69 E-value=0.1 Score=38.81 Aligned_cols=39 Identities=23% Similarity=0.369 Sum_probs=28.6
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEecc
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTC 86 (139)
...||.|++|+| .| . ....++.++.++|||||+++.++.
T Consensus 145 ~~~~D~V~~~~~---------~~--------~-------~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 145 IAMVDVIFADVA---------QP--------D-------QTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CCCEEEEEECCC---------CT--------T-------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcEEEEEEcCC---------Cc--------c-------HHHHHHHHHHHHcCCCeEEEEEEc
Confidence 358999999988 11 0 124567789999999999988543
No 133
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=90.55 E-value=0.29 Score=39.61 Aligned_cols=69 Identities=12% Similarity=0.083 Sum_probs=43.6
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCcc-ccHHHHHHHHh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFE-ESEEQAIIFSK 102 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~-ENE~vV~~~l~ 102 (139)
.+.||.|++|++... +. |. .+ ...+.+..+.+.|+|||.++..+.+..+. ....+++.+-+
T Consensus 157 ~~~fDvIi~D~~~~~-~~----~~--------~L-----~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~ 218 (317)
T 3gjy_A 157 PASRDVIIRDVFAGA-IT----PQ--------NF-----TTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMME 218 (317)
T ss_dssp TTCEEEEEECCSTTS-CC----CG--------GG-----SBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCcc-cc----ch--------hh-----hHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHH
Confidence 468999999986321 11 11 11 12567888889999999999877654321 22355666666
Q ss_pred hCCCcEEe
Q psy15213 103 NHKDSIRL 110 (139)
Q Consensus 103 ~~~~~~~~ 110 (139)
.++...++
T Consensus 219 vF~~v~~~ 226 (317)
T 3gjy_A 219 VFEHVAVI 226 (317)
T ss_dssp HCSEEEEE
T ss_pred HCCceEEE
Confidence 67665544
No 134
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=90.53 E-value=0.19 Score=38.14 Aligned_cols=41 Identities=22% Similarity=0.129 Sum_probs=29.5
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHH---HhhCCCcEEe
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIF---SKNHKDSIRL 110 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~---l~~~~~~~~~ 110 (139)
|..+|..+.+.|||||.++.+|+. +...+++ +..++.++.+
T Consensus 147 ~~~~l~~~~~~LkpGG~l~~~td~------~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 147 SPTLLAEYAYVLRVGGLVYTITDV------LELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp CHHHHHHHHHHEEEEEEEEEEESC------HHHHHHHHHHHHTSTTEEEE
T ss_pred hHHHHHHHHHHCCCCCEEEEEeCC------HHHHHHHHHHHHHCCCcccc
Confidence 457899999999999999998763 3444443 4556666655
No 135
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=90.52 E-value=0.27 Score=41.04 Aligned_cols=55 Identities=22% Similarity=0.268 Sum_probs=33.5
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEE-eccCCCc
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLF-VTCSLWF 90 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvY-sTCS~~~ 90 (139)
.++||+|++|++=...+. .+... ...-..++.++.+.+.|+|||.+|. +.|-..+
T Consensus 282 ~~~yDvIIvDl~D~~~s~-----------~p~g~-a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~ 337 (381)
T 3c6k_A 282 GREFDYVINDLTAVPIST-----------SPEED-STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT 337 (381)
T ss_dssp TCCEEEEEEECCSSCCCC-----------C-----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH
T ss_pred cCceeEEEECCCCCcccC-----------cccCc-chHHHHHHHHHHHHHhcCCCCEEEEecCCCcch
Confidence 468999999976111100 01000 0123567888889999999999986 4554444
No 136
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=90.40 E-value=0.24 Score=35.68 Aligned_cols=24 Identities=4% Similarity=0.119 Sum_probs=20.2
Q ss_pred HHHHHHHHhcccCCcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
..++..+.++|+|||.++......
T Consensus 145 ~~~l~~~~~~L~~gG~l~~~~~~~ 168 (207)
T 1jsx_A 145 NDMVSWCHHLPGEQGRFYALKGQM 168 (207)
T ss_dssp HHHHHHHTTSEEEEEEEEEEESSC
T ss_pred HHHHHHHHHhcCCCcEEEEEeCCC
Confidence 478999999999999999876543
No 137
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=90.35 E-value=0.19 Score=37.68 Aligned_cols=45 Identities=13% Similarity=0.059 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhCCCcEEec
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLN 111 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~~~~~~~~ 111 (139)
|..++..+.+.|||||+++.+|-.-.. -+.+..++...+.++.+.
T Consensus 129 ~~~~l~~~~r~LkpGG~l~i~td~~~~---~~~~~~~~~~~~~~~~~~ 173 (218)
T 3dxy_A 129 QVPFAELVKSKLQLGGVFHMATDWEPY---AEHMLEVMSSIDGYKNLS 173 (218)
T ss_dssp SHHHHHHHHHHEEEEEEEEEEESCHHH---HHHHHHHHHTSTTEEECC
T ss_pred hHHHHHHHHHHcCCCcEEEEEeCCHHH---HHHHHHHHHhCCCccccc
Confidence 356889999999999999988743211 122333445556666543
No 138
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=89.98 E-value=0.32 Score=35.68 Aligned_cols=45 Identities=11% Similarity=0.156 Sum_probs=31.8
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
+.||.|++... ....... ...++|.++.+.|||||.++.++....
T Consensus 108 ~~fD~v~~~~~-------------l~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 108 EKYDMVVSALS-------------IHHLEDE-------DKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp SCEEEEEEESC-------------GGGSCHH-------HHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred CCceEEEEeCc-------------cccCCHH-------HHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 68999998754 1122221 125688999999999999999886554
No 139
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=89.44 E-value=0.34 Score=34.78 Aligned_cols=26 Identities=19% Similarity=0.272 Sum_probs=22.1
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
..++|.++.+.|||||.++.++.+..
T Consensus 107 ~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 107 VKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 46788899999999999999988653
No 140
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=89.42 E-value=0.72 Score=35.06 Aligned_cols=58 Identities=17% Similarity=0.157 Sum_probs=40.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
...||.|+.+.+. .....++..+.++|+|||+++.+.... +..+.+...++.
T Consensus 182 ~~~fD~Vv~n~~~-------------------------~~~~~~l~~~~~~LkpgG~lils~~~~---~~~~~v~~~l~~ 233 (254)
T 2nxc_A 182 FGPFDLLVANLYA-------------------------ELHAALAPRYREALVPGGRALLTGILK---DRAPLVREAMAG 233 (254)
T ss_dssp GCCEEEEEEECCH-------------------------HHHHHHHHHHHHHEEEEEEEEEEEEEG---GGHHHHHHHHHH
T ss_pred CCCCCEEEECCcH-------------------------HHHHHHHHHHHHHcCCCCEEEEEeecc---CCHHHHHHHHHH
Confidence 4579999987650 113578899999999999999976432 345566666666
Q ss_pred CCCcEEe
Q psy15213 104 HKDSIRL 110 (139)
Q Consensus 104 ~~~~~~~ 110 (139)
. ++++.
T Consensus 234 ~-Gf~~~ 239 (254)
T 2nxc_A 234 A-GFRPL 239 (254)
T ss_dssp T-TCEEE
T ss_pred C-CCEEE
Confidence 4 45544
No 141
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=89.40 E-value=0.37 Score=35.79 Aligned_cols=26 Identities=27% Similarity=0.286 Sum_probs=21.8
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~ 90 (139)
.++|..+.++|||||+++.++++...
T Consensus 130 ~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 130 ERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 45889999999999999999876443
No 142
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=89.29 E-value=1.1 Score=33.05 Aligned_cols=71 Identities=21% Similarity=0.141 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhcccCCcEEEEeccCC------------CccccHHHHHHHHhhCCCcEEecC---CCcccCCCCCCCCCC
Q psy15213 63 YSCKILNNLWKMLKPGGKLLFVTCSL------------WFEESEEQAIIFSKNHKDSIRLNS---PGQLLPTVNKKQDYD 127 (139)
Q Consensus 63 ~Q~~lL~~a~~~lk~gG~lvYsTCS~------------~~~ENE~vV~~~l~~~~~~~~~~~---~~~~~P~~~~~~~~~ 127 (139)
....+|.++.++|||||+++.++..- ...-+++.+..++++. +++.+.. +...-+.. .+.+
T Consensus 176 ~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~~~~~~~~~~~~~~~~---~~~~ 251 (265)
T 2i62_A 176 AYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEA-GYTIEQFEVISQNYSSTT---SNNE 251 (265)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHT-TCEEEEEEEECCCCCTTT---BCCC
T ss_pred HHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHC-CCEEEEEEEecccCCccc---cccc
Confidence 34678999999999999999876321 1112456667777765 4554432 11111111 3445
Q ss_pred cEEEEEEEec
Q psy15213 128 GFFYSLFQKR 137 (139)
Q Consensus 128 GfFia~l~k~ 137 (139)
++|+.+-+|.
T Consensus 252 ~~~~~~a~K~ 261 (265)
T 2i62_A 252 GLFSLVGRKP 261 (265)
T ss_dssp CEEEEEEECC
T ss_pred eEEEEEeccc
Confidence 6776666664
No 143
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=89.03 E-value=0.13 Score=38.35 Aligned_cols=23 Identities=35% Similarity=0.642 Sum_probs=19.7
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..++.++.++|||||++++..++
T Consensus 150 ~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 150 NFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp HHHHHTHHHHEEEEEEEEECCHH
T ss_pred HHHHHHHHHhcCCCeEEEEEecC
Confidence 56789999999999999987665
No 144
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=88.72 E-value=1.9 Score=33.37 Aligned_cols=65 Identities=17% Similarity=0.108 Sum_probs=37.5
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCc--EEEEeccCCCccccH---HHHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG--KLLFVTCSLWFEESE---EQAI 98 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG--~lvYsTCS~~~~ENE---~vV~ 98 (139)
.+.||.|+.|.. ...|. ..+.... +.+.|..+.+.||||| .++..+-. .++. +.+.
T Consensus 138 ~~~fD~V~sd~~-~~~~~-------------~~~d~~~--~l~~L~~~~r~LkpGG~~~fv~kv~~---~~~~~~~~~l~ 198 (265)
T 2oxt_A 138 VERTDVIMCDVG-ESSPK-------------WSVESER--TIKILELLEKWKVKNPSADFVVKVLC---PYSVEVMERLS 198 (265)
T ss_dssp CCCCSEEEECCC-CCCSC-------------HHHHHHH--HHHHHHHHHHHHHHCTTCEEEEEESC---TTSHHHHHHHH
T ss_pred CCCCcEEEEeCc-ccCCc-------------cchhHHH--HHHHHHHHHHHhccCCCeEEEEEeCC---CCChhHHHHHH
Confidence 468999999976 22221 0111111 1227888889999999 88875533 3344 4444
Q ss_pred HHHhhCCCc
Q psy15213 99 IFSKNHKDS 107 (139)
Q Consensus 99 ~~l~~~~~~ 107 (139)
.+...+..+
T Consensus 199 ~l~~~f~~v 207 (265)
T 2oxt_A 199 VMQRKWGGG 207 (265)
T ss_dssp HHHHHHCCE
T ss_pred HHHHHcCCE
Confidence 444444443
No 145
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=88.72 E-value=0.77 Score=33.20 Aligned_cols=44 Identities=20% Similarity=0.139 Sum_probs=31.7
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhCCCcEEe
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRL 110 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~~~~~~~ 110 (139)
..+|..+.++|+|||.++.++.... ..+.+.+..+++.. +++.+
T Consensus 131 ~~~l~~~~~~L~~gG~l~i~~~~~~-~~~~~~~~~~l~~~-Gf~~~ 174 (215)
T 2zfu_A 131 RDFLEEANRVLKPGGLLKVAEVSSR-FEDVRTFLRAVTKL-GFKIV 174 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECGGG-CSCHHHHHHHHHHT-TEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCC-CCCHHHHHHHHHHC-CCEEE
Confidence 5678888999999999999876532 23566667777765 56544
No 146
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=88.68 E-value=0.92 Score=32.37 Aligned_cols=25 Identities=20% Similarity=0.449 Sum_probs=21.3
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
..++|.++.++|||||.++.++.+.
T Consensus 110 ~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 110 RQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp HHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred HHHHHHHHHHhcCCCcEEEEEEecc
Confidence 4678899999999999999987654
No 147
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=88.61 E-value=0.44 Score=34.51 Aligned_cols=45 Identities=20% Similarity=0.307 Sum_probs=31.6
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.+.||.|++..+. ......+ ..++|.++.++|+|||.++..++..
T Consensus 101 ~~~~D~v~~~~~~-------------~~~~~~~-------~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 101 DKTFDYVIFIDSI-------------VHFEPLE-------LNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp TTCEEEEEEESCG-------------GGCCHHH-------HHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCcEEEEEEcCch-------------HhCCHHH-------HHHHHHHHHHHcCCCcEEEEEecCh
Confidence 4689999988660 0111111 3568899999999999999987753
No 148
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=88.57 E-value=2.4 Score=33.06 Aligned_cols=55 Identities=11% Similarity=0.102 Sum_probs=32.9
Q ss_pred CccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCc--EEEEeccC
Q psy15213 16 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG--KLLFVTCS 87 (139)
Q Consensus 16 ~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG--~lvYsTCS 87 (139)
.|..... .+.||.|+.|.. ...|. ..+.... +.+.|..+.+.||||| .++..+-+
T Consensus 139 ~D~~~l~-~~~fD~Vvsd~~-~~~~~-------------~~~d~~~--~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 139 VDVTKME-PFQADTVLCDIG-ESNPT-------------AAVEASR--TLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCGGGCC-CCCCSEEEECCC-CCCSC-------------HHHHHHH--HHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CcHhhCC-CCCcCEEEECCC-cCCCc-------------hhhhHHH--HHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 3444332 468999999976 32221 0111111 1227888889999999 88875543
No 149
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=88.44 E-value=0.62 Score=32.89 Aligned_cols=42 Identities=24% Similarity=0.381 Sum_probs=28.6
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEec
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
.+.||.|+.... ....++.+ ..++|..+.+.|||||.++..+
T Consensus 95 ~~~~D~v~~~~~-------------l~~~~~~~-------~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 95 DRQYDFILSTVV-------------LMFLEAKT-------IPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CCCEEEEEEESC-------------GGGSCGGG-------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCceEEEEcch-------------hhhCCHHH-------HHHHHHHHHHhcCCCeEEEEEE
Confidence 568999997654 11122222 2568889999999999977654
No 150
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=88.25 E-value=0.76 Score=33.19 Aligned_cols=45 Identities=18% Similarity=0.018 Sum_probs=32.7
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCcc---------ccHHHHHHHHhhCCCcEEe
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFE---------ESEEQAIIFSKNHKDSIRL 110 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~---------ENE~vV~~~l~~~~~~~~~ 110 (139)
..+|..+.++|+|||.++.+++..... -+.+.+..++++. +++.+
T Consensus 123 ~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~ 176 (219)
T 3dh0_A 123 LKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDA-GIRVG 176 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHT-TCEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHC-CCEEE
Confidence 678899999999999999988664432 2356677777765 45544
No 151
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=87.86 E-value=0.73 Score=34.44 Aligned_cols=74 Identities=11% Similarity=0.005 Sum_probs=37.3
Q ss_pred CCcCEEEEcCCCCCccc-cc----c-----CCCCCcc------CCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 25 KYFDRILADLPCTGSGV-VR----R-----NPDIPWL------RRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~-~~----r-----~p~~~~~------~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
+.||.|+++||+...+. +. + .|...+. ..+.. -......++..+..+++++|.+.. .+
T Consensus 139 ~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG---~l~~~~~~~~~~~~~l~~~g~~~~---~~ 212 (254)
T 2h00_A 139 IIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGG---ELEFVKRIIHDSLQLKKRLRWYSC---ML 212 (254)
T ss_dssp CCBSEEEECCCCC-------------------------CTTTTHHHHT---HHHHHHHHHHHHHHHGGGBSCEEE---EE
T ss_pred CcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCC---EEEEEHHHHHHHHhcccceEEEEE---CC
Confidence 57999999999987651 10 0 1111110 01111 112234567777888899986643 34
Q ss_pred CccccHHHHHHHHhhC
Q psy15213 89 WFEESEEQAIIFSKNH 104 (139)
Q Consensus 89 ~~~ENE~vV~~~l~~~ 104 (139)
...++.+.+..++++.
T Consensus 213 ~~~~~~~~~~~~l~~~ 228 (254)
T 2h00_A 213 GKKCSLAPLKEELRIQ 228 (254)
T ss_dssp SSTTSHHHHHHHHHHT
T ss_pred CChhHHHHHHHHHHHc
Confidence 4455545556666654
No 152
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=87.78 E-value=0.14 Score=37.71 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=26.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEec
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
...||.|++++++.. ++..+.++|||||+++.++
T Consensus 160 ~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 LGLFDAIHVGASASE----------------------------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HCCEEEEEECSBBSS----------------------------CCHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHH----------------------------HHHHHHHhcCCCcEEEEEE
Confidence 467999999988531 2366678999999998864
No 153
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=87.76 E-value=0.53 Score=34.45 Aligned_cols=23 Identities=35% Similarity=0.533 Sum_probs=19.4
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.++|.++.++|+|||.++.++.+
T Consensus 117 ~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 117 KQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCeEEEEEcCC
Confidence 56788999999999999986654
No 154
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=87.52 E-value=0.66 Score=35.27 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=28.9
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEe
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 84 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYs 84 (139)
.+.||.|++..+. ...+... +..+|.++.++|+|||.++..
T Consensus 182 ~~~fD~i~~~~~~-------------~~~~~~~-------~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 182 QENYDFIVSTVVF-------------MFLNRER-------VPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp CSCEEEEEECSSG-------------GGSCGGG-------HHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCccEEEEccch-------------hhCCHHH-------HHHHHHHHHHhcCCCcEEEEE
Confidence 5789999987751 1122222 356889999999999996664
No 155
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=87.03 E-value=1.1 Score=33.03 Aligned_cols=23 Identities=9% Similarity=0.161 Sum_probs=19.9
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..+|.++.+.|||||.++.++-.
T Consensus 120 ~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 120 FELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp HHHHHHHHHHBCTTCCEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEeCC
Confidence 56788899999999999998765
No 156
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=86.98 E-value=0.54 Score=32.59 Aligned_cols=51 Identities=18% Similarity=0.042 Sum_probs=32.6
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHh
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSK 102 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~ 102 (139)
..+.||.|+++.+ ....+++..+.++ |||.+++++++.. ..++ +...++
T Consensus 97 ~~~~~D~i~~~~~--------------------------~~~~~~l~~~~~~--~gG~l~~~~~~~~--~~~~-~~~~l~ 145 (183)
T 2yxd_A 97 DKLEFNKAFIGGT--------------------------KNIEKIIEILDKK--KINHIVANTIVLE--NAAK-IINEFE 145 (183)
T ss_dssp GGCCCSEEEECSC--------------------------SCHHHHHHHHHHT--TCCEEEEEESCHH--HHHH-HHHHHH
T ss_pred cCCCCcEEEECCc--------------------------ccHHHHHHHHhhC--CCCEEEEEecccc--cHHH-HHHHHH
Confidence 3368999999987 0113456666666 9999999987643 2333 444455
Q ss_pred hC
Q psy15213 103 NH 104 (139)
Q Consensus 103 ~~ 104 (139)
++
T Consensus 146 ~~ 147 (183)
T 2yxd_A 146 SR 147 (183)
T ss_dssp HT
T ss_pred Hc
Confidence 44
No 157
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=86.76 E-value=0.54 Score=37.01 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=24.5
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEe
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 84 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYs 84 (139)
...||.|++|+|. |. .++..+.+.|+|||+++..
T Consensus 185 ~~~fD~V~~~~~~---------~~------------------~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 185 SLTFDAVALDMLN---------PH------------------VTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp ---EEEEEECSSS---------TT------------------TTHHHHGGGEEEEEEEEEE
T ss_pred CCCeeEEEECCCC---------HH------------------HHHHHHHHhcCCCcEEEEE
Confidence 3579999999871 11 1678899999999999853
No 158
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=86.74 E-value=0.63 Score=34.44 Aligned_cols=45 Identities=11% Similarity=-0.012 Sum_probs=31.2
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCc-----------cccHHHHHHHHhhCCCcEEe
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWF-----------EESEEQAIIFSKNHKDSIRL 110 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~-----------~ENE~vV~~~l~~~~~~~~~ 110 (139)
.++|..+.++|||||+++.++..... .-+.+.+..++++. +++.+
T Consensus 165 ~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~~~ 220 (241)
T 2ex4_A 165 AEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSA-GLSLL 220 (241)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHT-TCCEE
T ss_pred HHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHc-CCeEE
Confidence 67899999999999999997643221 11566677777765 45443
No 159
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=86.65 E-value=0.85 Score=35.23 Aligned_cols=24 Identities=29% Similarity=0.668 Sum_probs=20.4
Q ss_pred HHHHHHHHHhcccCCcEEEEeccC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
+.++|..+.+.|||||+++.++.+
T Consensus 206 ~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 206 VTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp HHHHHHHHHHHEEEEEEEEEECCC
T ss_pred HHHHHHHHHHhcCCCeEEEEEecC
Confidence 456899999999999999998744
No 160
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=86.64 E-value=0.61 Score=35.20 Aligned_cols=24 Identities=25% Similarity=0.359 Sum_probs=21.2
Q ss_pred HHHHHHHHHhcccCCcEEEEeccC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..++|.++.++|||||+++.+++.
T Consensus 153 ~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 153 LDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCCEEEEEECC
Confidence 467899999999999999998876
No 161
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=86.23 E-value=0.78 Score=34.74 Aligned_cols=49 Identities=18% Similarity=-0.048 Sum_probs=33.4
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHh
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSK 102 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~ 102 (139)
+.||.|++|+. +. + .-+..++++|+|||+||.=..+ .......|..+++
T Consensus 121 ~~fDlIfIDg~-------------k~-------------~-~~~~~~l~~l~~GG~Iv~DNv~--~r~~y~~v~~~~~ 169 (202)
T 3cvo_A 121 RHPDVVLVDGR-------------FR-------------V-GCALATAFSITRPVTLLFDDYS--QRRWQHQVEEFLG 169 (202)
T ss_dssp CCCSEEEECSS-------------SH-------------H-HHHHHHHHHCSSCEEEEETTGG--GCSSGGGGHHHHC
T ss_pred CCCCEEEEeCC-------------Cc-------------h-hHHHHHHHhcCCCeEEEEeCCc--CCcchHHHHHHHh
Confidence 67999999996 10 0 2244477899999999874433 3344566677776
No 162
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=86.06 E-value=2 Score=37.91 Aligned_cols=78 Identities=12% Similarity=0.191 Sum_probs=55.4
Q ss_pred ccCCCCcCEEEEcCCCCCccccccCCCCCccCCH-hHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHH
Q psy15213 21 FYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRK-NDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAII 99 (139)
Q Consensus 21 ~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~-~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~ 99 (139)
|....+||.|++|.. + .++-.+ .+=++-+-.-.-|-..|+.+|+|||.+|--.=-+...-.|.||..
T Consensus 216 ~p~~~ryDlvfvn~~-----t-------~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~a 283 (670)
T 4gua_A 216 FPPQARYDLVFINIG-----T-------KYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTA 283 (670)
T ss_dssp CCCCCCEEEEEECCC-----C-------CCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHH
T ss_pred CCCCCcccEEEEecC-----C-------CcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHH
Confidence 434568999999986 1 122221 233333334445667899999999999999999999999999999
Q ss_pred HHhhCCCcEEe
Q psy15213 100 FSKNHKDSIRL 110 (139)
Q Consensus 100 ~l~~~~~~~~~ 110 (139)
+..++..+...
T Consensus 284 laRkF~~~rv~ 294 (670)
T 4gua_A 284 LARKFVRVSAA 294 (670)
T ss_dssp HHHTEEEEEEE
T ss_pred HHhheeeeeee
Confidence 98887554443
No 163
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=86.02 E-value=0.41 Score=37.61 Aligned_cols=36 Identities=17% Similarity=0.270 Sum_probs=26.5
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
...||+|+++++....+ ..+.+.|||||+++.+..+
T Consensus 142 ~~~fD~Iv~~~~~~~~~----------------------------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVP----------------------------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp GCCEEEEEECSBBSCCC----------------------------HHHHHHEEEEEEEEEEBCB
T ss_pred CCCeEEEEEcCCHHHHH----------------------------HHHHHhcCCCcEEEEEECC
Confidence 46899999999854321 2456689999999998543
No 164
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=85.22 E-value=2.1 Score=29.50 Aligned_cols=44 Identities=9% Similarity=0.182 Sum_probs=31.2
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccc---------cHHHHHHHHhhCCCcEEec
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEE---------SEEQAIIFSKNHKDSIRLN 111 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~E---------NE~vV~~~l~~~~~~~~~~ 111 (139)
..+|.++.+.|||||+++.++......+ ..+.+..+++ +++.+.
T Consensus 92 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---Gf~~~~ 144 (170)
T 3i9f_A 92 QHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS---NFVVEK 144 (170)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT---TEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh---CcEEEE
Confidence 5788899999999999999876544222 3556667776 565543
No 165
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=85.11 E-value=0.87 Score=33.65 Aligned_cols=23 Identities=35% Similarity=0.602 Sum_probs=20.0
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..+|.++.++|||||.++.++.+
T Consensus 139 ~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 139 NKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEEec
Confidence 67889999999999999998754
No 166
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=85.05 E-value=1.1 Score=32.45 Aligned_cols=24 Identities=29% Similarity=0.668 Sum_probs=20.4
Q ss_pred HHHHHHHHhcccCCcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.++|..+.++|||||+++.++...
T Consensus 121 ~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 121 SRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred HHHHHHHHHHcCCCeEEEEEECCc
Confidence 468889999999999999987644
No 167
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=84.97 E-value=1.8 Score=31.29 Aligned_cols=23 Identities=9% Similarity=0.057 Sum_probs=19.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.++|+.+.+.|||||.++.+.+.
T Consensus 121 ~~~l~~~~~~LkpgG~li~~~~~ 143 (217)
T 3jwh_A 121 GAFERVLFEFAQPKIVIVTTPNI 143 (217)
T ss_dssp HHHHHHHHTTTCCSEEEEEEEBH
T ss_pred HHHHHHHHHHcCCCEEEEEccCc
Confidence 67899999999999988876664
No 168
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=84.92 E-value=0.15 Score=37.70 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=27.0
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
...||+|++++++.. ++..+.+.|||||+|+.++-.
T Consensus 161 ~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 161 NAPYNAIHVGAAAPD----------------------------TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GCSEEEEEECSCBSS----------------------------CCHHHHHTEEEEEEEEEEESC
T ss_pred CCCccEEEECCchHH----------------------------HHHHHHHHhcCCCEEEEEEec
Confidence 368999999988521 114667899999999987643
No 169
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=84.84 E-value=0.99 Score=34.81 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=28.6
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEec
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
...+|.|++|.+.. . .....+.++..+|||||+++.+.
T Consensus 145 ~~~vDvVf~d~~~~-----------------~-------~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 145 VEGVDGLYADVAQP-----------------E-------QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CCCEEEEEECCCCT-----------------T-------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEEEEEeccCC-----------------h-------hHHHHHHHHHHhccCCCEEEEEE
Confidence 35789999998821 1 12457889999999999999864
No 170
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=84.71 E-value=0.57 Score=33.81 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=26.9
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccC
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
....||.|+++..+... . + .+.++|||||+++.+...
T Consensus 140 ~~~~~D~i~~~~~~~~~-------------~-~--------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 140 ARAPFDAIIVTAAPPEI-------------P-T--------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGCCEEEEEESSBCSSC-------------C-T--------------HHHHTEEEEEEEEEEECS
T ss_pred cCCCccEEEEccchhhh-------------h-H--------------HHHHhcccCcEEEEEEcC
Confidence 35689999999763211 1 0 356799999999998776
No 171
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=84.64 E-value=0.92 Score=33.42 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCCc------------cccHHHHHHHHhhCCCcEE
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLWF------------EESEEQAIIFSKNHKDSIR 109 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~~------------~ENE~vV~~~l~~~~~~~~ 109 (139)
..++|.++.+.|||||+++.++..... .-..+.+..++++. +++.
T Consensus 176 ~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~~ 232 (254)
T 1xtp_A 176 FVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNES-GVRV 232 (254)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHH-TCCE
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHC-CCEE
Confidence 467889999999999999998853221 12346666677654 3433
No 172
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=84.61 E-value=8.5 Score=31.01 Aligned_cols=89 Identities=12% Similarity=0.123 Sum_probs=49.4
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCC-cEEEEeccCCCccccHHHHHHHH
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG-GKLLFVTCSLWFEESEEQAIIFS 101 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~g-G~lvYsTCS~~~~ENE~vV~~~l 101 (139)
.+..+|.|+.|.-.+ +|.. .+... .|..||.-|.+.|+|| |.+|.-.-...-.+..+.+..+-
T Consensus 144 ~~~~~DlVlsD~APn-sG~~-------------~~D~~--rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk 207 (300)
T 3eld_A 144 PTEPSDTLLCDIGES-SSNP-------------LVERD--RTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQ 207 (300)
T ss_dssp CCCCCSEEEECCCCC-CSSH-------------HHHHH--HHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHH
T ss_pred CCCCcCEEeecCcCC-CCCH-------------HHHHH--HHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHH
Confidence 356899999997655 5541 12222 3445599999999999 99876432211333334444444
Q ss_pred hhCCCcEEecCCCcccCCCCCCCCCCcEEEEEE
Q psy15213 102 KNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLF 134 (139)
Q Consensus 102 ~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~l 134 (139)
..+..+.. .-| .+.....+-|++|..
T Consensus 208 ~~F~~V~~------~KP-aSR~~S~E~Y~V~~~ 233 (300)
T 3eld_A 208 LRFGGGIV------RVP-FSRNSTHEMYYISGA 233 (300)
T ss_dssp HHHCCEEE------CCT-TSCTTCCCEEEESSC
T ss_pred HhCCcEEE------EeC-CCCCCChHHeeeccC
Confidence 44443332 223 222244566666543
No 173
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=84.46 E-value=1.6 Score=32.27 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=19.9
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..+|.++.+.|||||.++.++..
T Consensus 112 ~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 112 LAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp HHHHHHHGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCeEEEEEeCC
Confidence 46889999999999999998854
No 174
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=84.19 E-value=3 Score=29.70 Aligned_cols=22 Identities=32% Similarity=0.616 Sum_probs=19.0
Q ss_pred HHHHHHHHhcccCCcEEEEecc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTC 86 (139)
..+|..+.++|||||+++.++-
T Consensus 132 ~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 132 IELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCeEEEEEec
Confidence 3678889999999999999875
No 175
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=84.14 E-value=3.3 Score=31.40 Aligned_cols=71 Identities=25% Similarity=0.317 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhcccCCcEEEEeccCC------------CccccHHHHHHHHhhCCCcEEecC-----CCcccCCCCCCCC
Q psy15213 63 YSCKILNNLWKMLKPGGKLLFVTCSL------------WFEESEEQAIIFSKNHKDSIRLNS-----PGQLLPTVNKKQD 125 (139)
Q Consensus 63 ~Q~~lL~~a~~~lk~gG~lvYsTCS~------------~~~ENE~vV~~~l~~~~~~~~~~~-----~~~~~P~~~~~~~ 125 (139)
-...+|.++.++|||||+++.+...- ..--+.+.+..+|++. +++.+.. +..+-... .+
T Consensus 193 ~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a-Gf~~~~~~~~~~~~~~~~~~---~~ 268 (289)
T 2g72_A 193 SFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRS-GYKVRDLRTYIMPAHLQTGV---DD 268 (289)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHT-TEEEEEEEEEECCGGGCCTT---BC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHc-CCeEEEeeEeeccccccccc---cC
Confidence 34678999999999999999864210 0011455667777765 4544332 11122221 45
Q ss_pred CCcEEEEEEEec
Q psy15213 126 YDGFFYSLFQKR 137 (139)
Q Consensus 126 ~~GfFia~l~k~ 137 (139)
.+++|+..-+|.
T Consensus 269 ~~~~~~~~~~~~ 280 (289)
T 2g72_A 269 VKGVFFAWAQKV 280 (289)
T ss_dssp CCEEEEEEEEEC
T ss_pred cceEEEEEEecc
Confidence 667766555543
No 176
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=84.01 E-value=0.79 Score=39.24 Aligned_cols=89 Identities=19% Similarity=0.209 Sum_probs=44.9
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhccc-------CCcEEEEeccC--CCcccc
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLK-------PGGKLLFVTCS--LWFEES 93 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk-------~gG~lvYsTCS--~~~~EN 93 (139)
+..+||.||..||-++...-........... .++.+.-.+.+.+.+|| +||++++.+=. +...-.
T Consensus 299 ~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~------~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~ 372 (530)
T 3ufb_A 299 DKDRVDVILTNPPFGGEEEKGILGNFPEDMQ------TAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGI 372 (530)
T ss_dssp GGGCBSEEEECCCSSCBCCHHHHTTSCGGGC------CCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTH
T ss_pred ccccceEEEecCCCCccccccccccCchhcc------cchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccch
Confidence 3468999999999875422110000000000 01234445666666665 79998886532 222223
Q ss_pred HHHHH-HHHhhCCCcE-EecCCCc-ccC
Q psy15213 94 EEQAI-IFSKNHKDSI-RLNSPGQ-LLP 118 (139)
Q Consensus 94 E~vV~-~~l~~~~~~~-~~~~~~~-~~P 118 (139)
+..|. ++++++ .+. ++.+|.. ++|
T Consensus 373 ~~~iRk~Lle~~-~l~aII~LP~~~F~~ 399 (530)
T 3ufb_A 373 SARIKEELLKNF-NLHTIVRLPEGVFAP 399 (530)
T ss_dssp HHHHHHHHHHHS-EEEEEEECCTTTTTT
T ss_pred HHHHHHHHhhcC-EEEEEEECCcccCcC
Confidence 44454 455554 332 4455543 345
No 177
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=83.70 E-value=2.8 Score=32.62 Aligned_cols=42 Identities=12% Similarity=0.052 Sum_probs=28.6
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEecc
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTC 86 (139)
.+.||.|+.+.. ...+...+ ....+....++| |||+|+.|..
T Consensus 108 ~~~fD~Vv~~~~-------------l~~~~~~~-------~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 108 AGHFDFVLNDRL-------------INRFTTEE-------ARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp TTCCSEEEEESC-------------GGGSCHHH-------HHHHHHHHHHHH-TTSEEEEEEE
T ss_pred CCCccEEEEhhh-------------hHhCCHHH-------HHHHHHHHHHhC-cCcEEEEEec
Confidence 458999999865 11223222 355677778888 9999998654
No 178
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=83.63 E-value=0.68 Score=33.89 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=27.1
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
...||.|+++.++... . ..+.+.|+|||+++.++.+-
T Consensus 132 ~~~fD~v~~~~~~~~~-------------~---------------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTL-------------L---------------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GCCEEEEEESSBBSSC-------------C---------------HHHHHTEEEEEEEEEEECSS
T ss_pred CCCccEEEECCcHHHH-------------H---------------HHHHHHcCCCcEEEEEEcCC
Confidence 4689999999774321 1 14667899999999987654
No 179
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=83.57 E-value=1.2 Score=31.81 Aligned_cols=53 Identities=6% Similarity=0.016 Sum_probs=30.5
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
+.||.|++|||-.. +.. ....+++..+++.+ |+ +|+.|. + .+.+.+...+...
T Consensus 109 ~~~D~v~~~~p~~~-------------~~~-------~~~~~~l~~~~~~~--g~--~~~~~~--~-~~~~~~~~~~~~~ 161 (200)
T 1ne2_A 109 GKYDTWIMNPPFGS-------------VVK-------HSDRAFIDKAFETS--MW--IYSIGN--A-KARDFLRREFSAR 161 (200)
T ss_dssp CCEEEEEECCCC---------------------------CHHHHHHHHHHE--EE--EEEEEE--G-GGHHHHHHHHHHH
T ss_pred CCeeEEEECCCchh-------------ccC-------chhHHHHHHHHHhc--Cc--EEEEEc--C-chHHHHHHHHHHC
Confidence 58999999999321 111 12245677777777 43 777773 3 3345555555543
No 180
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=82.86 E-value=2.5 Score=32.37 Aligned_cols=27 Identities=11% Similarity=0.237 Sum_probs=22.7
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCCc
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~~ 90 (139)
...+|..+.++|||||+++..+.+...
T Consensus 162 ~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 162 YDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp HHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred HHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 367889999999999999998877653
No 181
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=82.73 E-value=1.6 Score=33.27 Aligned_cols=35 Identities=20% Similarity=0.178 Sum_probs=26.1
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccccHHHHHH
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAII 99 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~ 99 (139)
..++..+.++|||||++++..+....+|-++....
T Consensus 164 ~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~ 198 (249)
T 3g89_A 164 CVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPA 198 (249)
T ss_dssp HHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHH
T ss_pred HHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHH
Confidence 46888999999999999998887655554444333
No 182
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=82.62 E-value=4.7 Score=33.02 Aligned_cols=56 Identities=14% Similarity=0.165 Sum_probs=32.6
Q ss_pred cCccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEecc
Q psy15213 15 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 15 ~~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTC 86 (139)
..|...+.....||.|++|||. ..+..+...+..+.+.|-. .++- -+||.+..-|-
T Consensus 296 ~~D~~~~~~~~~fD~Iv~NPPY--------------g~rl~~~~~l~~ly~~lg~-~lk~-~~g~~~~iit~ 351 (393)
T 3k0b_A 296 QLQVADFQTEDEYGVVVANPPY--------------GERLEDEEAVRQLYREMGI-VYKR-MPTWSVYVLTS 351 (393)
T ss_dssp ECCGGGCCCCCCSCEEEECCCC--------------CCSHHHHHHHHHHHHHHHH-HHHT-CTTCEEEEEEC
T ss_pred ECChHhCCCCCCCCEEEECCCC--------------ccccCCchhHHHHHHHHHH-HHhc-CCCCEEEEEEC
Confidence 3444445445689999999993 2223334455566665443 3444 36877766443
No 183
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=82.28 E-value=0.45 Score=38.08 Aligned_cols=52 Identities=15% Similarity=0.060 Sum_probs=33.9
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC--ccccHH
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW--FEESEE 95 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~--~~ENE~ 95 (139)
.+.||.|+...+-.. +..+. ..+.+..+.++|||||.++.+++++. +.+.++
T Consensus 114 ~~~~D~Ivs~~~~~~-------------~~~~~-------~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~ 167 (348)
T 2y1w_A 114 PEQVDIIISEPMGYM-------------LFNER-------MLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQ 167 (348)
T ss_dssp SSCEEEEEECCCBTT-------------BTTTS-------HHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHH
T ss_pred CCceeEEEEeCchhc-------------CChHH-------HHHHHHHHHhhcCCCeEEEEecCcEEEEEecchH
Confidence 357999998876221 11111 13456678899999999998877765 444443
No 184
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=81.93 E-value=0.61 Score=35.10 Aligned_cols=25 Identities=20% Similarity=0.365 Sum_probs=21.2
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
...+|.++.+.|||||.++.++.+.
T Consensus 131 ~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 131 KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 4678899999999999999987654
No 185
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=81.80 E-value=1.7 Score=31.48 Aligned_cols=23 Identities=26% Similarity=0.332 Sum_probs=19.3
Q ss_pred HHHHHHHHHhcccCCcEEEEecc
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTC 86 (139)
..++|.++.+.|||||.++.++-
T Consensus 121 ~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 121 LKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEec
Confidence 36789999999999999998654
No 186
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=81.57 E-value=2.3 Score=32.69 Aligned_cols=27 Identities=4% Similarity=0.241 Sum_probs=22.4
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCCc
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~~ 90 (139)
..++|..+.++|||||+++.++.+...
T Consensus 173 ~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 173 YDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred HHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 367788999999999999998876543
No 187
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=81.25 E-value=3.9 Score=33.46 Aligned_cols=55 Identities=15% Similarity=0.060 Sum_probs=30.6
Q ss_pred cCccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEec
Q psy15213 15 TNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 15 ~~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
..|...+.....||.|+.|||.. . +..+...+..+.+.+- +.++. -+||.+..-|
T Consensus 289 ~~D~~~l~~~~~fD~Iv~NPPYG-~-------------rl~~~~~l~~ly~~lg-~~lk~-~~g~~~~iit 343 (384)
T 3ldg_A 289 QMRLQDFKTNKINGVLISNPPYG-E-------------RLLDDKAVDILYNEMG-ETFAP-LKTWSQFILT 343 (384)
T ss_dssp ECCGGGCCCCCCSCEEEECCCCT-T-------------TTSCHHHHHHHHHHHH-HHHTT-CTTSEEEEEE
T ss_pred ECChHHCCccCCcCEEEECCchh-h-------------ccCCHHHHHHHHHHHH-HHHhh-CCCcEEEEEE
Confidence 34455454446899999999942 1 1112233445555543 34444 4688876644
No 188
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=81.20 E-value=1.5 Score=33.42 Aligned_cols=23 Identities=22% Similarity=0.401 Sum_probs=20.0
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.++|.++.+.|||||.++.....
T Consensus 106 ~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 106 ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEEEecc
Confidence 47889999999999999987766
No 189
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=81.19 E-value=1 Score=33.27 Aligned_cols=24 Identities=29% Similarity=0.263 Sum_probs=20.2
Q ss_pred HHHHHHHHhcccCCcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.++|.++.+.|||||+++.++...
T Consensus 120 ~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 120 AGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp HHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEecCcc
Confidence 677889999999999999976543
No 190
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=81.06 E-value=4.6 Score=32.22 Aligned_cols=56 Identities=14% Similarity=0.130 Sum_probs=35.1
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
.+||.|++||| +.. +.+..+. .+.|..+... .++|+++- +.|.-+...++.+++..
T Consensus 158 ~~fdLVfiDPP--------------Ye~-k~~~~~v----l~~L~~~~~r-~~~Gi~v~----WYPi~~~~~~~~~~~~l 213 (283)
T 2oo3_A 158 EKRGLIFIDPS--------------YER-KEEYKEI----PYAIKNAYSK-FSTGLYCV----WYPVVNKAWTEQFLRKM 213 (283)
T ss_dssp TSCEEEEECCC--------------CCS-TTHHHHH----HHHHHHHHHH-CTTSEEEE----EEEESSHHHHHHHHHHH
T ss_pred CCccEEEECCC--------------CCC-CcHHHHH----HHHHHHhCcc-CCCeEEEE----EEeccchHHHHHHHHHH
Confidence 47999999999 331 1122221 2233343333 57888877 77888888888887654
No 191
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=81.00 E-value=5.1 Score=32.64 Aligned_cols=57 Identities=12% Similarity=0.171 Sum_probs=32.8
Q ss_pred ccCccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEecc
Q psy15213 14 KTNNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 14 ~~~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTC 86 (139)
...|...+.....||.|++|||. ..+..+...+..+.+++-. .++- -+||.+..-|-
T Consensus 289 ~~~D~~~l~~~~~~D~Iv~NPPy--------------g~rl~~~~~l~~ly~~lg~-~lk~-~~g~~~~iit~ 345 (385)
T 3ldu_A 289 NVGDATQFKSEDEFGFIITNPPY--------------GERLEDKDSVKQLYKELGY-AFRK-LKNWSYYLITS 345 (385)
T ss_dssp EECCGGGCCCSCBSCEEEECCCC--------------CCSHHHHHHHHHHHHHHHH-HHHT-SBSCEEEEEES
T ss_pred EECChhhcCcCCCCcEEEECCCC--------------cCccCCHHHHHHHHHHHHH-HHhh-CCCCEEEEEEC
Confidence 34455555445689999999992 2223344455566655433 3333 35777766544
No 192
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=80.66 E-value=0.1 Score=41.26 Aligned_cols=22 Identities=14% Similarity=0.062 Sum_probs=17.8
Q ss_pred HHHHhcccCCcEEEEeccCCCc
Q psy15213 69 NNLWKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 69 ~~a~~~lk~gG~lvYsTCS~~~ 90 (139)
..|.++++++|...|+|||...
T Consensus 143 e~a~rlla~~G~~~y~~ls~~~ 164 (299)
T 2h1r_A 143 EFAERMLANVGDSNYSRLTINV 164 (299)
T ss_dssp HHHHHHTCCTTSTTCCHHHHHH
T ss_pred HHHHHHhcCCCCcchhHHHHHH
Confidence 4567789999999999998654
No 193
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=80.39 E-value=1.2 Score=32.95 Aligned_cols=20 Identities=25% Similarity=0.263 Sum_probs=17.3
Q ss_pred HHHHHHHHhcccCCcEEEEe
Q psy15213 65 CKILNNLWKMLKPGGKLLFV 84 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYs 84 (139)
..+|.++.++|||||+++.+
T Consensus 158 ~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 158 EILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEE
Confidence 45688999999999999886
No 194
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=80.27 E-value=1.6 Score=32.99 Aligned_cols=22 Identities=36% Similarity=0.828 Sum_probs=19.3
Q ss_pred HHHHHHHHhcccCCcEEEEecc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTC 86 (139)
.++|..+.++|||||+++.++.
T Consensus 153 ~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 153 RSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEEEe
Confidence 4688999999999999998775
No 195
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=79.95 E-value=14 Score=29.28 Aligned_cols=89 Identities=12% Similarity=0.186 Sum_probs=47.8
Q ss_pred CCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCC-cEEEEeccCCCccccHHHHHHHH
Q psy15213 23 KNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG-GKLLFVTCSLWFEESEEQAIIFS 101 (139)
Q Consensus 23 ~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~g-G~lvYsTCS~~~~ENE~vV~~~l 101 (139)
.+..||.||.|.-=+ +|. ..+... .|..||.-|.+.|+|| |.+|...-.-.-.+-.+..+.+-
T Consensus 137 ~~~~~DlVlsD~apn-sG~-------------~~~D~~--rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk 200 (277)
T 3evf_A 137 EPVKCDTLLCDIGES-SSS-------------SVTEGE--RTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQ 200 (277)
T ss_dssp CCCCCSEEEECCCCC-CSC-------------HHHHHH--HHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCCccEEEecCccC-cCc-------------hHHHHH--HHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHH
Confidence 356899999996311 222 112222 2334599999999999 99988543321233334444444
Q ss_pred hhCCCcEEecCCCcccCCCCCCCCCCcEEEEEE
Q psy15213 102 KNHKDSIRLNSPGQLLPTVNKKQDYDGFFYSLF 134 (139)
Q Consensus 102 ~~~~~~~~~~~~~~~~P~~~~~~~~~GfFia~l 134 (139)
..+..+... -| .+...-.+-|++|.-
T Consensus 201 ~~F~~V~~~------KP-aSR~~S~E~Y~V~~~ 226 (277)
T 3evf_A 201 RRFGGTVIR------NP-LSRNSTHEMYYVSGA 226 (277)
T ss_dssp HHHCCEEEC------CT-TSCTTCCCEEEESSC
T ss_pred HhcCCEEEE------eC-CCCCCCCceEEEEec
Confidence 444433322 23 222344566666643
No 196
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=79.69 E-value=1.7 Score=35.03 Aligned_cols=22 Identities=23% Similarity=0.626 Sum_probs=19.2
Q ss_pred HHHHHHHHhcccCCcEEEEecc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTC 86 (139)
..+|.++.++|||||+|+.++-
T Consensus 183 ~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 183 LALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEEe
Confidence 4789999999999999999763
No 197
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=79.65 E-value=1.8 Score=33.44 Aligned_cols=26 Identities=19% Similarity=0.485 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhcccCCcEEEEeccC
Q psy15213 62 KYSCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 62 ~~Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
....+++.++.++|+|||+|+..+..
T Consensus 197 ~~~~~~l~~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 197 EGLKRMFRRIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 35678999999999999999987654
No 198
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=79.57 E-value=2.8 Score=31.60 Aligned_cols=24 Identities=17% Similarity=0.207 Sum_probs=20.5
Q ss_pred HHHHHHHHhcccCCcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
..+|.++.++|||||.++.++...
T Consensus 148 ~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 148 DAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp HHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEecC
Confidence 677888999999999999987654
No 199
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=78.55 E-value=1.6 Score=34.99 Aligned_cols=44 Identities=9% Similarity=0.224 Sum_probs=31.2
Q ss_pred CccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEec
Q psy15213 16 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 16 ~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
.|...+. ...||.|++++- . + -..+++..+.+.|||||+|+...
T Consensus 179 gDa~~l~-d~~FDvV~~~a~------~---~----------------d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 179 GDETVID-GLEFDVLMVAAL------A---E----------------PKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp SCGGGGG-GCCCSEEEECTT------C---S----------------CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CchhhCC-CCCcCEEEECCC------c---c----------------CHHHHHHHHHHHcCCCcEEEEEc
Confidence 3444443 468999998653 0 1 13578889999999999999865
No 200
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=78.45 E-value=1.5 Score=32.70 Aligned_cols=22 Identities=14% Similarity=0.147 Sum_probs=18.9
Q ss_pred HHHHHHHHHhcccCCcEEEEec
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
...+|.++.+.|||||.++.++
T Consensus 130 ~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 130 LDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCcEEEEEe
Confidence 3578889999999999999864
No 201
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=78.08 E-value=2.3 Score=32.47 Aligned_cols=39 Identities=8% Similarity=-0.060 Sum_probs=25.8
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCcc--------ccHHHHHHHHhh
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFE--------ESEEQAIIFSKN 103 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~--------ENE~vV~~~l~~ 103 (139)
...+.+..++|||||+++..|..+.+. -.++.+..++..
T Consensus 171 ~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~ 217 (252)
T 2gb4_A 171 DRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT 217 (252)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC
Confidence 567888999999999997665443211 134555666654
No 202
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=78.04 E-value=3.8 Score=30.01 Aligned_cols=24 Identities=13% Similarity=0.153 Sum_probs=19.8
Q ss_pred HHHHHHHHhcccCCcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.++|.++.+.|||||+++.+..+.
T Consensus 143 ~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 143 ELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECT
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCc
Confidence 568888899999999988876654
No 203
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=77.47 E-value=0.76 Score=37.22 Aligned_cols=60 Identities=15% Similarity=0.098 Sum_probs=37.3
Q ss_pred CccccccCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC--cccc
Q psy15213 16 NNRFRFYKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW--FEES 93 (139)
Q Consensus 16 ~~~~~~~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~--~~EN 93 (139)
.|...+...+.||.|+.++..... . .... ...++..+.++|||||.++.+.+++. +.++
T Consensus 119 ~d~~~~~~~~~~D~Iv~~~~~~~l----~--------~e~~-------~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 179 (376)
T 3r0q_C 119 GSVEDISLPEKVDVIISEWMGYFL----L--------RESM-------FDSVISARDRWLKPTGVMYPSHARMWLAPIKS 179 (376)
T ss_dssp SCGGGCCCSSCEEEEEECCCBTTB----T--------TTCT-------HHHHHHHHHHHEEEEEEEESSEEEEEEEEECC
T ss_pred CchhhcCcCCcceEEEEcChhhcc----c--------chHH-------HHHHHHHHHhhCCCCeEEEEecCeEEEEeecc
Confidence 344444334789999997641111 0 0111 25567777799999999998888754 4444
Q ss_pred H
Q psy15213 94 E 94 (139)
Q Consensus 94 E 94 (139)
+
T Consensus 180 ~ 180 (376)
T 3r0q_C 180 N 180 (376)
T ss_dssp T
T ss_pred h
Confidence 4
No 204
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=77.26 E-value=2.1 Score=30.66 Aligned_cols=22 Identities=14% Similarity=0.252 Sum_probs=19.2
Q ss_pred HHHHHHHhcccCCcEEEEeccC
Q psy15213 66 KILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 66 ~lL~~a~~~lk~gG~lvYsTCS 87 (139)
++|.++.++|+|||.++.++-.
T Consensus 111 ~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 111 AVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp HHHHHTGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEEeCC
Confidence 7899999999999999998643
No 205
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=77.24 E-value=2 Score=33.26 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
+.++|..+.++|||||++++++....
T Consensus 200 ~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 200 LHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 67889999999999999999885443
No 206
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=76.92 E-value=2.8 Score=32.72 Aligned_cols=22 Identities=32% Similarity=0.392 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhcccCCcEEEEe
Q psy15213 63 YSCKILNNLWKMLKPGGKLLFV 84 (139)
Q Consensus 63 ~Q~~lL~~a~~~lk~gG~lvYs 84 (139)
.|++++.+....|+|||.|+..
T Consensus 230 ~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 230 TQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCcEEEEE
Confidence 3799999999999999999873
No 207
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=76.86 E-value=1.4 Score=31.74 Aligned_cols=36 Identities=31% Similarity=0.357 Sum_probs=26.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
...||.|+++.+.... . ..+.++|||||+++.++.+
T Consensus 144 ~~~fD~v~~~~~~~~~-------------~---------------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 144 LAPYDRIYTTAAGPKI-------------P---------------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GCCEEEEEESSBBSSC-------------C---------------HHHHHTEEEEEEEEEEESS
T ss_pred CCCeeEEEECCchHHH-------------H---------------HHHHHHcCCCcEEEEEECC
Confidence 4679999998773211 1 2667899999999997654
No 208
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=76.85 E-value=1.8 Score=32.68 Aligned_cols=23 Identities=17% Similarity=0.310 Sum_probs=19.4
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..+|.++.+.|||||+++.++..
T Consensus 134 ~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 134 EAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCcEEEEEecC
Confidence 46788899999999999987754
No 209
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=76.34 E-value=2 Score=30.54 Aligned_cols=26 Identities=19% Similarity=0.236 Sum_probs=20.7
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~ 90 (139)
.++|.++.+.|||||.++.++....+
T Consensus 128 ~~~l~~~~~~L~pgG~l~~~~~~~~~ 153 (219)
T 3dlc_A 128 ATAFREIYRILKSGGKTYIGGGFGNK 153 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCSSH
T ss_pred HHHHHHHHHhCCCCCEEEEEeccCcH
Confidence 45888999999999999997644443
No 210
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=76.20 E-value=1.5 Score=32.40 Aligned_cols=18 Identities=44% Similarity=0.532 Sum_probs=14.5
Q ss_pred HHHhcccCCcEEEEeccC
Q psy15213 70 NLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 70 ~a~~~lk~gG~lvYsTCS 87 (139)
.+.+.|+|||+++.++-.
T Consensus 174 ~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 174 PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp HHHHTEEEEEEEEEEECS
T ss_pred HHHHhcCCCcEEEEEEec
Confidence 457789999999997754
No 211
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=75.37 E-value=6.8 Score=30.29 Aligned_cols=24 Identities=13% Similarity=0.398 Sum_probs=20.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.++|+++.+.|+|||+|+......
T Consensus 252 ~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 252 LRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp HHHHHHHHHHSCTTCEEEEEECCB
T ss_pred HHHHHHHHHhcCCCCEEEEEEecc
Confidence 688999999999999998876543
No 212
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=75.20 E-value=2.3 Score=31.44 Aligned_cols=23 Identities=26% Similarity=0.440 Sum_probs=19.5
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..+|.++.+.|||||+++.++..
T Consensus 104 ~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 104 RKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEEcC
Confidence 46788999999999999987654
No 213
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=75.17 E-value=1.7 Score=33.09 Aligned_cols=23 Identities=22% Similarity=0.355 Sum_probs=19.8
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..+|.++.+.|||||+++.++..
T Consensus 167 ~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 167 LKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEEEec
Confidence 57888999999999999998754
No 214
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=75.06 E-value=4.4 Score=31.64 Aligned_cols=26 Identities=27% Similarity=0.552 Sum_probs=21.2
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
..++|+++.+.|+|||+|+.....+.
T Consensus 266 ~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 266 AREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 37789999999999999988765443
No 215
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=74.77 E-value=1.2 Score=35.07 Aligned_cols=23 Identities=35% Similarity=0.621 Sum_probs=20.7
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..+|+++.++|||||+++.+|..
T Consensus 149 ~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 149 ATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEEEeCC
Confidence 58899999999999999998864
No 216
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=74.49 E-value=9 Score=30.34 Aligned_cols=26 Identities=12% Similarity=0.047 Sum_probs=21.2
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~ 90 (139)
.++|+++.+.|||||+|+........
T Consensus 267 ~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 267 ISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred HHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 67899999999999999887655443
No 217
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=73.76 E-value=7.7 Score=30.45 Aligned_cols=24 Identities=21% Similarity=0.513 Sum_probs=20.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.++|+++.+.|||||+|+......
T Consensus 266 ~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 266 VRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp HHHHHHHHHTCCTTCEEEEEECCB
T ss_pred HHHHHHHHHhcCCCCEEEEEEecc
Confidence 678999999999999998876543
No 218
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=73.74 E-value=9.2 Score=30.36 Aligned_cols=26 Identities=23% Similarity=0.356 Sum_probs=21.5
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~ 90 (139)
.++|+++.+.|+|||+|+........
T Consensus 287 ~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 287 VRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp HHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred HHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 57999999999999999987655543
No 219
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=72.74 E-value=11 Score=28.76 Aligned_cols=26 Identities=12% Similarity=0.013 Sum_probs=17.0
Q ss_pred HHHHHHHHHhccc---C--CcEEEEeccCCC
Q psy15213 64 SCKILNNLWKMLK---P--GGKLLFVTCSLW 89 (139)
Q Consensus 64 Q~~lL~~a~~~lk---~--gG~lvYsTCS~~ 89 (139)
...++..+.++|+ | ||+++.+.+...
T Consensus 179 ~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~ 209 (281)
T 3bzb_A 179 HDALLRSVKMLLALPANDPTAVALVTFTHHR 209 (281)
T ss_dssp HHHHHHHHHHHBCCTTTCTTCEEEEEECC--
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEEEEeee
Confidence 3567778888899 9 997655444433
No 220
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=72.36 E-value=1.8 Score=32.68 Aligned_cols=24 Identities=29% Similarity=0.451 Sum_probs=20.9
Q ss_pred HHHHHHHHHhcccCCcEEEEeccC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
...+|.++.+.|||||+++.+++.
T Consensus 154 ~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 154 HRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 367899999999999999988765
No 221
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=72.10 E-value=10 Score=29.39 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=21.2
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
+.++|+++.+.|+|||+|+.......
T Consensus 253 ~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 253 AVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 47889999999999999988765443
No 222
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=71.26 E-value=2.4 Score=30.74 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=21.6
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
..++|.++.++|||||.++.+++..
T Consensus 120 ~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 120 LGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp HHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHhcCCCeEEEEEeccC
Confidence 4678999999999999999987755
No 223
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=71.18 E-value=6.5 Score=30.24 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=20.7
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
..++|.++.+.|+|||+++.......
T Consensus 250 ~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 250 CEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 36788999999999998888665543
No 224
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=70.93 E-value=3.7 Score=34.56 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=20.4
Q ss_pred HHHHHHHHHhcccCCcEEEEeccC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
+...|..+.+.|||||+++.....
T Consensus 303 ~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 303 VRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHHHHHGGGEEEEEEEEEECGG
T ss_pred HHHHHHHHHHhcCCCeEEEEEecc
Confidence 467899999999999999997554
No 225
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=69.98 E-value=1.4 Score=34.81 Aligned_cols=46 Identities=17% Similarity=0.116 Sum_probs=30.7
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
++||.|+.+++.... .....+ ..+|..+.++|||||.++.+++++.
T Consensus 104 ~~~D~Ivs~~~~~~l------------~~~~~~-------~~~l~~~~~~LkpgG~li~~~~~~~ 149 (328)
T 1g6q_1 104 PKVDIIISEWMGYFL------------LYESMM-------DTVLYARDHYLVEGGLIFPDKCSIH 149 (328)
T ss_dssp SCEEEEEECCCBTTB------------STTCCH-------HHHHHHHHHHEEEEEEEESCEEEEE
T ss_pred CcccEEEEeCchhhc------------ccHHHH-------HHHHHHHHhhcCCCeEEEEeeceEE
Confidence 689999998763221 011111 3567777889999999997776653
No 226
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=69.55 E-value=9.1 Score=30.01 Aligned_cols=22 Identities=36% Similarity=0.631 Sum_probs=19.2
Q ss_pred HHHHHHHHhcccCCcEEEEecc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTC 86 (139)
.++|.++.+.|+|||+|+....
T Consensus 267 ~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 267 LTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCcEEEEEec
Confidence 5789999999999999988765
No 227
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=69.24 E-value=2 Score=34.26 Aligned_cols=31 Identities=19% Similarity=0.200 Sum_probs=21.8
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCC--ccccHH
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLW--FEESEE 95 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~--~~ENE~ 95 (139)
..+|..+.++|||||+++.+.|++. +.++.+
T Consensus 151 ~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~ 183 (340)
T 2fyt_A 151 DSVLYAKNKYLAKGGSVYPDICTISLVAVSDVN 183 (340)
T ss_dssp HHHHHHHHHHEEEEEEEESCEEEEEEEEECCHH
T ss_pred HHHHHHHHhhcCCCcEEEcccceEEEEEecchh
Confidence 3577888899999999996665543 344443
No 228
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=69.03 E-value=12 Score=26.88 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=19.6
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.++|..+.++|+|||.++.++..
T Consensus 119 ~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 119 ERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEEeC
Confidence 46888899999999999998654
No 229
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=67.28 E-value=3.6 Score=29.78 Aligned_cols=25 Identities=12% Similarity=0.084 Sum_probs=20.1
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
...+.+..++|||||++++.|..+.
T Consensus 120 ~~~l~~~~r~LkpgG~~~l~~~~~~ 144 (203)
T 1pjz_A 120 ERYVQHLEALMPQACSGLLITLEYD 144 (203)
T ss_dssp HHHHHHHHHHSCSEEEEEEEEESSC
T ss_pred HHHHHHHHHHcCCCcEEEEEEEecC
Confidence 5678899999999999777776654
No 230
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=66.86 E-value=1.1 Score=37.91 Aligned_cols=46 Identities=17% Similarity=0.185 Sum_probs=30.0
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
.+.||+|+.+++ +. .+..+ ...+.+..+.++|||||+++.+.+++.
T Consensus 222 ~~~fD~Ivs~~~----~~---------~~~~e-------~~~~~l~~~~~~LkpgG~li~~~~~~~ 267 (480)
T 3b3j_A 222 PEQVDIIISEPM----GY---------MLFNE-------RMLESYLHAKKYLKPSGNMFPTIGDVH 267 (480)
T ss_dssp SSCEEEEECCCC----HH---------HHTCH-------HHHHHHHHGGGGEEEEEEEESCEEEEE
T ss_pred CCCeEEEEEeCc----hH---------hcCcH-------HHHHHHHHHHHhcCCCCEEEEEeceee
Confidence 357999998776 11 11111 124456678899999999997665543
No 231
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=66.45 E-value=4.3 Score=30.28 Aligned_cols=20 Identities=40% Similarity=0.735 Sum_probs=17.7
Q ss_pred HHHHHHHhcccCCcEEEEec
Q psy15213 66 KILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 66 ~lL~~a~~~lk~gG~lvYsT 85 (139)
.+|.++.++|||||.++..+
T Consensus 123 ~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 123 EALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEE
Confidence 67888889999999999976
No 232
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=65.28 E-value=2.9 Score=31.90 Aligned_cols=27 Identities=22% Similarity=0.314 Sum_probs=23.0
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCCCc
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~~~ 90 (139)
+.++|.++.+.|||||+|+.++.....
T Consensus 169 ~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 169 RRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred HHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 467889999999999999999877653
No 233
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=64.66 E-value=7.6 Score=30.35 Aligned_cols=23 Identities=30% Similarity=0.574 Sum_probs=19.9
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.++|.++.+.|+|||+++.+...
T Consensus 268 ~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 268 VRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCCcEEEEEEEe
Confidence 67889999999999999987655
No 234
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=63.76 E-value=1.9 Score=34.48 Aligned_cols=47 Identities=17% Similarity=0.114 Sum_probs=31.7
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
.+.||.|+.+.+-... ..... ...+|..+.++|||||+++.+.+++.
T Consensus 131 ~~~fD~Iis~~~~~~l------------~~~~~-------~~~~l~~~~r~LkpgG~li~~~~~~~ 177 (349)
T 3q7e_A 131 VEKVDIIISEWMGYCL------------FYESM-------LNTVLHARDKWLAPDGLIFPDRATLY 177 (349)
T ss_dssp SSCEEEEEECCCBBTB------------TBTCC-------HHHHHHHHHHHEEEEEEEESCEEEEE
T ss_pred CCceEEEEEccccccc------------cCchh-------HHHHHHHHHHhCCCCCEEccccceEE
Confidence 4789999998752211 01111 23567777889999999988777755
No 235
>2hlg_A Fruit-specific protein; beta antiparallel, plant protein; NMR {Lycopersicon esculentum}
Probab=63.54 E-value=2 Score=24.19 Aligned_cols=13 Identities=31% Similarity=0.424 Sum_probs=9.2
Q ss_pred CCcEEEEeccCCCc
Q psy15213 77 PGGKLLFVTCSLWF 90 (139)
Q Consensus 77 ~gG~lvYsTCS~~~ 90 (139)
|+|.- |+|||+.|
T Consensus 27 ~~G~t-y~~Cs~lP 39 (39)
T 2hlg_A 27 QYGLT-YRTCNLLP 39 (39)
T ss_dssp SSCCE-EEEEESCC
T ss_pred CCCcc-ceeeccCC
Confidence 34433 99999876
No 236
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=63.49 E-value=1.3 Score=34.42 Aligned_cols=53 Identities=25% Similarity=0.397 Sum_probs=29.0
Q ss_pred CcCEEEEcCCCCCcc-----ccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 26 YFDRILADLPCTGSG-----VVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 26 ~fD~ILlDaPCSg~G-----~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
.||.|+.+.|+..+. .+...+..... +.-.|+++..+ ..++|||.+ |+++|+.
T Consensus 93 ~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~--------~~m~qkEva~r--~vlkPGg~~-y~~lsv~ 150 (285)
T 1zq9_A 93 FFDTCVANLPYQISSPFVFKLLLHRPFFRCA--------ILMFQREFALR--LVAKPGDKL-YCRLSIN 150 (285)
T ss_dssp CCSEEEEECCGGGHHHHHHHHHHCSSCCSEE--------EEEEEHHHHHH--HHCCTTCTT-CSHHHHH
T ss_pred hhcEEEEecCcccchHHHHHHHhcCcchhhh--------hhhhhHHHHHH--HhcCCCCcc-cchhhhh
Confidence 699999999965431 11111111100 00124444432 267999996 9888874
No 237
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=63.24 E-value=0.69 Score=34.11 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=22.5
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
..+|.++.+.|||||+++.... ..+.+.+...+...
T Consensus 122 ~~~l~~~~~~LkpgG~l~~~~~----~~~~~~~~~~l~~~ 157 (226)
T 3m33_A 122 TSVILRLPELAAPDAHFLYVGP----RLNVPEVPERLAAV 157 (226)
T ss_dssp SGGGGGHHHHEEEEEEEEEEES----SSCCTHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCcEEEEeCC----cCCHHHHHHHHHHC
Confidence 3556777889999999993222 22334455666654
No 238
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=62.87 E-value=3.1 Score=30.22 Aligned_cols=21 Identities=29% Similarity=0.768 Sum_probs=18.7
Q ss_pred HHHHHHHHhcccCCcEEEEec
Q psy15213 65 CKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsT 85 (139)
..+|.++.+.|+|||+++.++
T Consensus 124 ~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 124 ARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCcCcEEEEEe
Confidence 478889999999999999976
No 239
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=62.87 E-value=7.2 Score=33.64 Aligned_cols=54 Identities=20% Similarity=0.265 Sum_probs=36.7
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
..||.|.+|+.. -.+||+ .|+ .+++.+..+++++||++...||. ..|.+.|.+.
T Consensus 178 ~~~d~~~~D~f~-----p~~np~---~w~-----------~~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~L~~a 231 (676)
T 3ps9_A 178 QKVDAWFLDGFA-----PAKNPD---MWT-----------QNLFNAMARLARPGGTLATFTSA-------GFVRRGLQDA 231 (676)
T ss_dssp TCEEEEEECCSC-----GGGCGG---GSC-----------HHHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHH
T ss_pred CcccEEEECCCC-----CcCChh---hhh-----------HHHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhC
Confidence 579999999851 245665 233 45666677789999998766665 4566666543
No 240
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=62.38 E-value=3.2 Score=29.64 Aligned_cols=23 Identities=26% Similarity=0.502 Sum_probs=19.7
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.++|.++.+.|||||.++.++-.
T Consensus 112 ~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 112 ERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEEEecC
Confidence 47888999999999999998754
No 241
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=61.31 E-value=6.9 Score=29.39 Aligned_cols=21 Identities=24% Similarity=0.398 Sum_probs=18.1
Q ss_pred HHHHHHHHhcccCCcEEEEec
Q psy15213 65 CKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsT 85 (139)
..+|..+.+.|||||+++..+
T Consensus 117 ~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 117 DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp GGTHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEEE
Confidence 568899999999999999853
No 242
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=61.16 E-value=3.4 Score=30.42 Aligned_cols=23 Identities=22% Similarity=0.368 Sum_probs=19.6
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.++|..+.++|||||.++.++.+
T Consensus 125 ~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 125 DDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEeCC
Confidence 57889999999999999998543
No 243
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=60.80 E-value=7.1 Score=30.92 Aligned_cols=20 Identities=35% Similarity=0.474 Sum_probs=17.6
Q ss_pred HHHHHHHHhcccCCcEEEEe
Q psy15213 65 CKILNNLWKMLKPGGKLLFV 84 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYs 84 (139)
..+|....++|||||++|..
T Consensus 165 ~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 165 NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GGTHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHHcCcCCEEEEE
Confidence 56788889999999999986
No 244
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=60.57 E-value=3.4 Score=28.80 Aligned_cols=20 Identities=35% Similarity=0.762 Sum_probs=17.7
Q ss_pred HHHHHHHHhcccCCcEEEEe
Q psy15213 65 CKILNNLWKMLKPGGKLLFV 84 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYs 84 (139)
.++|.++.+.|||||+++.+
T Consensus 81 ~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 81 AEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEE
Confidence 56889999999999999984
No 245
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=59.30 E-value=16 Score=32.23 Aligned_cols=44 Identities=18% Similarity=0.198 Sum_probs=25.8
Q ss_pred CcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEe
Q psy15213 26 YFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 84 (139)
Q Consensus 26 ~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYs 84 (139)
.||.|+.+||. |.. +. +.. .+..+.+. |...++.+.|||.++.-
T Consensus 303 ~~d~Iv~NPPY-G~R---------lg-~~~---~l~~ly~~-l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 303 PYGTVLSNPPY-GER---------LD-SEP---ALIALHSL-LGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp CCCEEEECCCC-CC-------------CCH---HHHHHHHH-HHHHHHHHCTTCEEEEE
T ss_pred CCCEEEeCCCc-ccc---------cc-chh---HHHHHHHH-HHHHHHhhCCCCeEEEE
Confidence 79999999995 221 11 112 23333333 45566666789988764
No 246
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=58.95 E-value=6.8 Score=29.10 Aligned_cols=22 Identities=32% Similarity=0.413 Sum_probs=18.4
Q ss_pred HHHHHHHHHhcccCCcEEEEec
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
+.++|..+.+.|||||+++.++
T Consensus 118 ~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 118 NRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp CHHHHHHHHTTEEEEEEEEEEE
T ss_pred hHHHHHHHHHhcCCCcEEEEEE
Confidence 3568899999999999999843
No 247
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=58.63 E-value=39 Score=26.83 Aligned_cols=45 Identities=18% Similarity=0.189 Sum_probs=29.4
Q ss_pred CCCCcCEEEEcC-CCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCC--cEEEEe
Q psy15213 23 KNKYFDRILADL-PCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPG--GKLLFV 84 (139)
Q Consensus 23 ~~~~fD~ILlDa-PCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~g--G~lvYs 84 (139)
....+|.||.|. |- +|. ..+... .|..||.-|.+.|+|| |.+|.-
T Consensus 153 ~~~~~DvVLSDmApn--sG~-------------~~~D~~--rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 153 EVIPGDTLLCDIGES--SPS-------------IAVEEQ--RTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CCCCCSEEEECCCCC--CSC-------------HHHHHH--HHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCCcCEEEecCccC--CCC-------------hHHHHH--HHHHHHHHHHHHcCCCCCCcEEEE
Confidence 357899999994 42 332 112222 2334589999999999 988763
No 248
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=58.13 E-value=4.1 Score=31.23 Aligned_cols=23 Identities=26% Similarity=0.554 Sum_probs=19.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..+|++..+.|||||+++.+.-.
T Consensus 158 ~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 158 QALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEB
T ss_pred hHHHHHHHHHcCCCcEEEEEecc
Confidence 46889999999999999987543
No 249
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=57.96 E-value=7.4 Score=29.86 Aligned_cols=25 Identities=16% Similarity=0.274 Sum_probs=21.5
Q ss_pred HHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
...+|++..+.|+|||+|+.++.+.
T Consensus 175 ~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 175 VDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred HHHHHHHHHHhCCCCcEEEEEEecC
Confidence 3678999999999999999988664
No 250
>1hru_A YRDC gene product; protein folding, structural genomics, RNA, SUA5, PSI, protein structure initiative, midwest center for structural genomics; 2.00A {Escherichia coli} SCOP: d.115.1.1
Probab=57.56 E-value=12 Score=27.54 Aligned_cols=40 Identities=10% Similarity=0.129 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhcccCCcEEEEeccCCC----ccccHHHHHHHHh
Q psy15213 63 YSCKILNNLWKMLKPGGKLLFVTCSLW----FEESEEQAIIFSK 102 (139)
Q Consensus 63 ~Q~~lL~~a~~~lk~gG~lvYsTCS~~----~~ENE~vV~~~l~ 102 (139)
.|.+.+..|.++|+.||.++|-|=|.. ..-|++.|+++.+
T Consensus 5 ~~~~~i~~a~~~L~~G~iva~ptdt~ygL~~da~~~~av~rl~~ 48 (188)
T 1hru_A 5 LQRDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLE 48 (188)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECSSSEEEEECTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEeCCCEeeeEEcCCCHHHHHHHHH
Confidence 466778999999999999999998876 3468888888843
No 251
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=57.50 E-value=8.8 Score=32.48 Aligned_cols=18 Identities=22% Similarity=0.497 Sum_probs=13.8
Q ss_pred HHHHHhcccCCcEEEEec
Q psy15213 68 LNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 68 L~~a~~~lk~gG~lvYsT 85 (139)
|...++.|||||+||-+-
T Consensus 271 L~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 271 LKERFANMKEGGRIVSSK 288 (438)
T ss_dssp HHHHHTTSCTTCEEEESS
T ss_pred HHHHHHcCCCCcEEEEee
Confidence 445667999999999653
No 252
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=56.86 E-value=4.4 Score=29.18 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=19.7
Q ss_pred HHHHHHHH-hcccCCcEEEEeccC
Q psy15213 65 CKILNNLW-KMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~-~~lk~gG~lvYsTCS 87 (139)
.++|+++. +.|||||+++.++-.
T Consensus 120 ~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 120 VALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCCEEEEEcCC
Confidence 47889999 999999999998743
No 253
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=56.41 E-value=4.7 Score=30.91 Aligned_cols=25 Identities=24% Similarity=0.353 Sum_probs=20.0
Q ss_pred HHHHHHHhcccCCcEEEEeccCCCc
Q psy15213 66 KILNNLWKMLKPGGKLLFVTCSLWF 90 (139)
Q Consensus 66 ~lL~~a~~~lk~gG~lvYsTCS~~~ 90 (139)
+.+..+.+.|||||+|+..+.+...
T Consensus 116 ~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 116 RFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred HHHHHHHHHcCCCCEEEEEECCCCC
Confidence 3577788899999999988876654
No 254
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=56.31 E-value=11 Score=32.53 Aligned_cols=54 Identities=20% Similarity=0.261 Sum_probs=36.6
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
..||.|.+|+..- .+||++ |+ .+++...++++++||++...||. ..|...|.+.
T Consensus 170 ~~~da~flD~f~p-----~~np~~---w~-----------~~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~l~~a 223 (689)
T 3pvc_A 170 NQVDAWFLDGFAP-----AKNPDM---WN-----------EQLFNAMARMTRPGGTFSTFTAA-------GFVRRGLQQA 223 (689)
T ss_dssp TCEEEEEECSSCC-------CCTT---CS-----------HHHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHT
T ss_pred CceeEEEECCCCC-----CCChhh---hh-----------HHHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhC
Confidence 5799999998622 356762 33 44666667788999998877776 4566666654
No 255
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=55.90 E-value=5.8 Score=28.72 Aligned_cols=24 Identities=21% Similarity=0.270 Sum_probs=20.1
Q ss_pred HHHHHHHHhcccCCcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.++|..+.+.|+|||+++.++...
T Consensus 133 ~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 133 LRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHHHHhCCCeEEEEEEcCC
Confidence 467899999999999999988543
No 256
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=55.02 E-value=24 Score=26.02 Aligned_cols=23 Identities=9% Similarity=-0.088 Sum_probs=16.1
Q ss_pred HHHHHHhcccCCcEEEEeccCCC
Q psy15213 67 ILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 67 lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
++...-.+++|||+++.++.+..
T Consensus 141 ~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 141 LALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp HHHHHHHHTTTCSEEEEEEECSS
T ss_pred HHHHHHHHhCCCCEEEEEEecCC
Confidence 44444556677999999877664
No 257
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=54.86 E-value=22 Score=26.93 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=30.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhCCCcEEe
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRL 110 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~~~~~~~ 110 (139)
.+||..+...|+++|++|.+.- .+.+.+...|.++ +|...
T Consensus 99 ~~Il~~~~~~L~~~~~lVlq~~-----~~~~~vr~~L~~~-Gf~i~ 138 (225)
T 3kr9_A 99 ARILEEGLGKLANVERLILQPN-----NREDDLRIWLQDH-GFQIV 138 (225)
T ss_dssp HHHHHHTGGGCTTCCEEEEEES-----SCHHHHHHHHHHT-TEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECC-----CCHHHHHHHHHHC-CCEEE
Confidence 6789999999999999999655 3666777777765 45443
No 258
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=53.94 E-value=13 Score=29.34 Aligned_cols=24 Identities=21% Similarity=0.241 Sum_probs=21.0
Q ss_pred HHHHHHHHhcccCCcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
..+|.+....|+|||+|+.++-+-
T Consensus 180 ~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 180 VGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp HHHHHHHHTTSCTTCEEEEEEECC
T ss_pred HHHHHHHHHhCCCCcEEEEEeccC
Confidence 678999999999999999997654
No 259
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=53.78 E-value=6.3 Score=30.24 Aligned_cols=23 Identities=30% Similarity=0.378 Sum_probs=20.2
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..+|.++.+.|||||.++.+|..
T Consensus 135 ~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 135 DMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEecCC
Confidence 57899999999999999998764
No 260
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=53.04 E-value=5.3 Score=28.71 Aligned_cols=22 Identities=23% Similarity=0.437 Sum_probs=19.1
Q ss_pred HHHHHHHHHhcccCCcEEEEec
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
+.++|.++.+.|||||+++.+.
T Consensus 119 ~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 119 SPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp SSHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEe
Confidence 4788999999999999999853
No 261
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=51.08 E-value=6.7 Score=29.82 Aligned_cols=23 Identities=22% Similarity=0.319 Sum_probs=19.1
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
...|.+..++|||||+++.++.+
T Consensus 152 ~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 152 PATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEEec
Confidence 45788889999999999987544
No 262
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=50.97 E-value=7.8 Score=28.32 Aligned_cols=22 Identities=27% Similarity=0.424 Sum_probs=18.9
Q ss_pred HHHHHHHHHhcccCCcEEEEec
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsT 85 (139)
..++|.++.+.|+|||.++..+
T Consensus 124 ~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 124 LRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEec
Confidence 4678899999999999998754
No 263
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=50.55 E-value=6.3 Score=29.22 Aligned_cols=24 Identities=25% Similarity=0.558 Sum_probs=20.4
Q ss_pred HHHHHHHHhcccCCcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
..+|..+.+.|||||+++.++...
T Consensus 146 ~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 146 GRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEEEeec
Confidence 478899999999999999987543
No 264
>1k7j_A Protein YCIO, protein TF1; structural genomics, X-RAY crystallography, putative translation factor, PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.115.1.1 PDB: 1kk9_A
Probab=50.09 E-value=10 Score=28.29 Aligned_cols=38 Identities=16% Similarity=0.289 Sum_probs=31.0
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCC----ccccHHHHHHHHh
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLW----FEESEEQAIIFSK 102 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~----~~ENE~vV~~~l~ 102 (139)
.+.+.+|.++|+.||.++|-|=|.. ..-|++.|+++.+
T Consensus 14 ~~~i~~a~~~L~~G~iva~pTdtvygL~~da~n~~Av~rl~~ 55 (206)
T 1k7j_A 14 QRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICR 55 (206)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETTEEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCEEEEEEeCCCHHHHHHHHH
Confidence 4568899999999999999998865 4468888888843
No 265
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=49.75 E-value=23 Score=28.10 Aligned_cols=39 Identities=23% Similarity=0.266 Sum_probs=24.7
Q ss_pred CCCcCEEEEc-CCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCc
Q psy15213 24 NKYFDRILAD-LPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGG 79 (139)
Q Consensus 24 ~~~fD~ILlD-aPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG 79 (139)
+..+|.||.| || + +|.. .-+..+.+. .|.-|.+.|+|||
T Consensus 137 ~~~~DvVLSDMAP-n-SG~~----------~vD~~Rs~~-----aL~~A~~~Lk~gG 176 (269)
T 2px2_A 137 SEISDTLLCDIGE-S-SPSA----------EIEEQRTLR-----ILEMVSDWLSRGP 176 (269)
T ss_dssp CCCCSEEEECCCC-C-CSCH----------HHHHHHHHH-----HHHHHHHHHTTCC
T ss_pred CCCCCEEEeCCCC-C-CCcc----------HHHHHHHHH-----HHHHHHHHhhcCC
Confidence 4589999999 46 3 4331 112222222 7788888999999
No 266
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=48.61 E-value=5.9 Score=30.15 Aligned_cols=23 Identities=13% Similarity=0.198 Sum_probs=19.1
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.++|.++.+.|||||.|+..+.+
T Consensus 129 ~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 129 EKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEecC
Confidence 47788899999999999885554
No 267
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=47.07 E-value=7.1 Score=32.08 Aligned_cols=37 Identities=24% Similarity=0.384 Sum_probs=28.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNH 104 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~ 104 (139)
.+.|..|..+|+|||+|+-- |++.-|+- .|+++++..
T Consensus 254 ~~~L~~a~~~L~~gGRl~VI--SFHSLEDR-iVK~~f~~~ 290 (347)
T 3tka_A 254 EQALKSSLNVLAPGGRLSII--SFHSLEDR-IVKRFMREN 290 (347)
T ss_dssp HHHHHHHHHHEEEEEEEEEE--ESSHHHHH-HHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCEEEEE--ecCchhHH-HHHHHHHHh
Confidence 46688999999999999874 58877765 557776654
No 268
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=47.03 E-value=7.2 Score=31.13 Aligned_cols=36 Identities=22% Similarity=0.360 Sum_probs=27.1
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
.+.|..|..+|+|||+|+- =|+|.-|+- .|+++++.
T Consensus 213 ~~~L~~a~~~L~~gGrl~v--isfHSLEDR-iVK~~~~~ 248 (285)
T 1wg8_A 213 KEFLEQAAEVLAPGGRLVV--IAFHSLEDR-VVKRFLRE 248 (285)
T ss_dssp HHHHHHHHHHEEEEEEEEE--EECSHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEE--EecCcHHHH-HHHHHHHh
Confidence 4678899999999999966 458887765 45666654
No 269
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=46.99 E-value=7.9 Score=28.57 Aligned_cols=22 Identities=32% Similarity=0.687 Sum_probs=18.5
Q ss_pred HHHHHHHHhcccCCcEEEEecc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTC 86 (139)
..+|.++.+.|||||+++.++.
T Consensus 120 ~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 120 ASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEEc
Confidence 3678899999999999998643
No 270
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=46.19 E-value=17 Score=25.95 Aligned_cols=40 Identities=23% Similarity=0.394 Sum_probs=30.2
Q ss_pred CCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEe
Q psy15213 36 CTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFV 84 (139)
Q Consensus 36 CSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYs 84 (139)
-||+|++. ..+.-++++.+.+.-++++++|-++ .|.+-|.
T Consensus 79 gsgsgvm~------i~f~gddlea~ekalkemirqarkf---agtvtyt 118 (170)
T 4hhu_A 79 GSGSGVMV------IVFEGDDLEALEKALKEMIRQARKF---AGTVTYT 118 (170)
T ss_dssp CTTCCEEE------EEEECSCHHHHHHHHHHHHHHHHHT---TCEEEEE
T ss_pred eCCceEEE------EEEecCcHHHHHHHHHHHHHHHHhh---cceEEEE
Confidence 47777753 2444578888999999999999987 4777773
No 271
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=45.25 E-value=18 Score=28.28 Aligned_cols=26 Identities=19% Similarity=0.487 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 63 YSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 63 ~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
...++|+++.+.|||||+++......
T Consensus 273 ~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 273 LSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 34778999999999999997766443
No 272
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=44.97 E-value=67 Score=25.50 Aligned_cols=58 Identities=17% Similarity=0.037 Sum_probs=43.2
Q ss_pred CcEEEEeccCCCccccHHHHHHHHhhCCCcEEecCCCcccCCCC-CCCCCCcEEEEEEEec
Q psy15213 78 GGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNSPGQLLPTVN-KKQDYDGFFYSLFQKR 137 (139)
Q Consensus 78 gG~lvYsTCS~~~~ENE~vV~~~l~~~~~~~~~~~~~~~~P~~~-~~~~~~GfFia~l~k~ 137 (139)
.|.++-.||.+...-..+.|..+++..|.+++++. .. +|... ...+++-.+|.++++.
T Consensus 244 ~g~~~~~~~~l~~~~t~eei~~~~~~~~~V~v~~~-~~-~p~~~~~v~g~~~~~vgr~r~~ 302 (340)
T 2hjs_A 244 FGDSLSVTLQCAEPVDLAAVTRVLDATKGIEWVGE-GD-YPTVVGDALGQDETYVGRVRAG 302 (340)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHSTTEEECCT-TC-CCCCCCCCTTSSCEEEEEEEEC
T ss_pred ceEEEEEEEEECCCCCHHHHHHHHhcCCCcEEeCC-CC-CCccHHHcCCCCEEEEEEEEec
Confidence 67888888888766677888899998887777663 22 56443 3478899999999863
No 273
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=44.20 E-value=30 Score=24.58 Aligned_cols=42 Identities=21% Similarity=0.304 Sum_probs=29.4
Q ss_pred cCCCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEE
Q psy15213 22 YKNKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLF 83 (139)
Q Consensus 22 ~~~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvY 83 (139)
.+...||.|++=.|=.|. ... +-+.++......|||||.|-.
T Consensus 55 Lp~stYD~V~~lt~~~~~---------~~~-----------l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQT---------DIK-----------FPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSSC---------SCC-----------CCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCccc---------hhh-----------cCHHHHHHHHHHhCCCCEEEe
Confidence 456799999888883320 011 126778888899999999965
No 274
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=44.08 E-value=17 Score=28.80 Aligned_cols=25 Identities=28% Similarity=0.363 Sum_probs=21.1
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
.++|+++.+.|||||+|+.....+.
T Consensus 280 ~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 280 LKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp HHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEEEEeccC
Confidence 5789999999999999988776543
No 275
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=44.08 E-value=25 Score=27.57 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=28.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHK 105 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~~ 105 (139)
...|....++|+|||+||.=-....+.+ ..-|..|++++.
T Consensus 224 ~~~Le~~~p~L~pGGiIv~DD~~~~~G~-~~Av~Ef~~~~~ 263 (282)
T 2wk1_A 224 WDTLTNLYPKVSVGGYVIVDDYMMCPPC-KDAVDEYRAKFD 263 (282)
T ss_dssp HHHHHHHGGGEEEEEEEEESSCTTCHHH-HHHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCCEEEEEcCCCCCHHH-HHHHHHHHHhcC
Confidence 5667889999999999998665444544 445566676653
No 276
>1jcu_A Conserved protein MTH1692; mixed alpha-beta structure, structural genomics; NMR {Methanothermobacterthermautotrophicus} SCOP: d.115.1.1
Probab=43.63 E-value=13 Score=27.87 Aligned_cols=38 Identities=13% Similarity=0.282 Sum_probs=31.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCC----ccccHHHHHHHHh
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLW----FEESEEQAIIFSK 102 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~----~~ENE~vV~~~l~ 102 (139)
.+.+.+|.++|+.||.++|-|=|.. ..-|++.|+++.+
T Consensus 13 ~~~i~~a~~~L~~G~vVa~pTdtvygL~~da~n~~Av~rl~~ 54 (208)
T 1jcu_A 13 PDVLEEAISVMEGGGIVIYPTDTIYGLGVNALDEDAVRRLFR 54 (208)
T ss_dssp CHHHHHHHHHHHTTCEEECCCSSSCEEEEETTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCEEEEEEeCCCHHHHHHHHH
Confidence 3568889999999999999998876 4568888888854
No 277
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=42.20 E-value=10 Score=27.61 Aligned_cols=20 Identities=45% Similarity=0.625 Sum_probs=17.6
Q ss_pred HHHHHHHHhcccCCcEEEEe
Q psy15213 65 CKILNNLWKMLKPGGKLLFV 84 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYs 84 (139)
..+|.++.+.|||||.++.+
T Consensus 121 ~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 121 PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCcEEEEE
Confidence 56788899999999999887
No 278
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=41.96 E-value=40 Score=23.59 Aligned_cols=44 Identities=25% Similarity=0.324 Sum_probs=34.6
Q ss_pred ccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhCCC
Q psy15213 50 WLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKD 106 (139)
Q Consensus 50 ~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~~~ 106 (139)
+.|.++++.+ ++....+. ...|.++|+ .+||--.+.+++...|+
T Consensus 68 ~~WKp~eVdk-------m~~k~~q~-~~dGl~iYC-----DdeNk~~m~Ki~~~lP~ 111 (126)
T 2rbg_A 68 FLWKKNEVDI-------FLKNLEKS-EVDGLLVYC-----DDENKVFMSKIVDNLPT 111 (126)
T ss_dssp EEECGGGHHH-------HHHHHTTC-CCCEEEEEE-----CGGGHHHHHHHHHTSCH
T ss_pred EEeCHHHHHH-------HHHHHHHh-CCCceEEEe-----CCCchhHHHHHHHhccH
Confidence 4678888854 55566666 889999994 48999999999998875
No 279
>3j21_M 50S ribosomal protein L15E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=40.48 E-value=7.1 Score=29.60 Aligned_cols=25 Identities=28% Similarity=0.755 Sum_probs=20.1
Q ss_pred CcCEEEEcCCCCCccccccCCCCCccCC
Q psy15213 26 YFDRILADLPCTGSGVVRRNPDIPWLRR 53 (139)
Q Consensus 26 ~fD~ILlDaPCSg~G~~~r~p~~~~~~~ 53 (139)
.|.+|||||-.. .++++|++.|--.
T Consensus 127 ~fEVILVDp~H~---aIr~Dp~~nWI~~ 151 (194)
T 3j21_M 127 WFEVIMVDPHHP---VIKSDPKIAWIAL 151 (194)
T ss_dssp EEEEEEECSSCH---HHHHSTTTGGGGS
T ss_pred eEEEEEEcCCCh---hhccCCccccccc
Confidence 478999999855 6789999988643
No 280
>3jyw_L 60S ribosomal protein L15(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 3izc_P 3izs_P 3o58_O 3o5h_O 3u5e_N 3u5i_N 4b6a_N 1s1i_L
Probab=40.37 E-value=14 Score=28.00 Aligned_cols=25 Identities=36% Similarity=0.744 Sum_probs=19.3
Q ss_pred CCcCEEEEcCCCCCccccccCCCCCccC
Q psy15213 25 KYFDRILADLPCTGSGVVRRNPDIPWLR 52 (139)
Q Consensus 25 ~~fD~ILlDaPCSg~G~~~r~p~~~~~~ 52 (139)
..|.+|||||-.. .++++|++.|--
T Consensus 127 K~fEVILVDp~H~---aIr~Dp~~nWI~ 151 (192)
T 3jyw_L 127 KYFEVILVDPQHK---AIRRDARYNWIC 151 (192)
T ss_dssp EEEEEEEECSSCS---STTTSSTTTGGG
T ss_pred ceEEEEEecCCch---hhccCCcccccc
Confidence 3578999999854 568899988753
No 281
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=39.30 E-value=17 Score=29.39 Aligned_cols=53 Identities=19% Similarity=0.239 Sum_probs=34.2
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
...||.||+..| |- +. ..+. ..+|.++...|++||.|+- ..+|..-++++++.
T Consensus 99 ~~~~d~v~~~~P-------------k~-k~----~~~~---~~~l~~~~~~l~~g~~i~~------~g~~~~g~~~~~~~ 151 (381)
T 3dmg_A 99 AGAYDLVVLALP-------------AG-RG----TAYV---QASLVAAARALRMGGRLYL------AGDKNKGFERYFKE 151 (381)
T ss_dssp TTCEEEEEEECC-------------GG-GC----HHHH---HHHHHHHHHHEEEEEEEEE------EEEGGGTHHHHHHH
T ss_pred cCCCCEEEEECC-------------cc-hh----HHHH---HHHHHHHHHhCCCCCEEEE------EEccHHHHHHHHHH
Confidence 457899999999 21 11 1223 3457788889999999854 34555566666543
No 282
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=38.98 E-value=20 Score=28.44 Aligned_cols=25 Identities=32% Similarity=0.590 Sum_probs=20.7
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
.++|+++.+.|||||+|+.....+.
T Consensus 278 ~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 278 ATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp HHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred HHHHHHHHHHcCCCCEEEEEEeccC
Confidence 5789999999999999988765543
No 283
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=38.89 E-value=11 Score=29.76 Aligned_cols=41 Identities=22% Similarity=0.287 Sum_probs=27.2
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhCCCcE
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSI 108 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~~~~~ 108 (139)
.+.|..|..+|+|||+|+-- |+|.-|+- .|+++++..+.+.
T Consensus 225 ~~~l~~~~~~l~~ggr~~vi--sfhsledr-~vk~~~~~~~~~~ 265 (301)
T 1m6y_A 225 KEFLKKAEDLLNPGGRIVVI--SFHSLEDR-IVKETFRNSKKLR 265 (301)
T ss_dssp HHHHHHGGGGEEEEEEEEEE--ESSHHHHH-HHHHHHHHCSSEE
T ss_pred HHHHHHHHHhhCCCCEEEEE--ecCcHHHH-HHHHHhhcCCcee
Confidence 35677788899999999653 47777654 5566666533343
No 284
>2eqa_A Hypothetical protein ST1526; YRDC/RIBB fold, YRDC domain, SUA5 domain, structural genomics, NPPSFA; HET: AMP; 1.80A {Sulfolobus tokodaii} PDB: 3aje_A* 4e1b_A*
Probab=37.86 E-value=24 Score=28.85 Aligned_cols=38 Identities=11% Similarity=0.180 Sum_probs=31.9
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCC----ccccHHHHHHHHh
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLW----FEESEEQAIIFSK 102 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~----~~ENE~vV~~~l~ 102 (139)
.+.+..|.++|+.||.++|-|=|.. ...|++.|+++.+
T Consensus 14 ~~~i~~aa~~L~~G~iVa~PTeTvYGLg~da~n~~AV~rI~~ 55 (352)
T 2eqa_A 14 IDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQ 55 (352)
T ss_dssp HHHHHHHHHHHHTTCCEEECCSSSCEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCEeEEEEeCCCHHHHHHHHH
Confidence 4568899999999999999999887 4578999999854
No 285
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=37.80 E-value=28 Score=27.45 Aligned_cols=25 Identities=28% Similarity=0.583 Sum_probs=20.5
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
.+||+++.+.|+|||+|+-.-.-+.
T Consensus 263 ~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 263 SHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred HHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 6789999999999999988665443
No 286
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=37.47 E-value=12 Score=29.63 Aligned_cols=14 Identities=36% Similarity=0.423 Sum_probs=12.5
Q ss_pred CCcCEEEEcCCCCC
Q psy15213 25 KYFDRILADLPCTG 38 (139)
Q Consensus 25 ~~fD~ILlDaPCSg 38 (139)
..||.|++|+|||+
T Consensus 97 ~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 97 EKVDGILMDLGVST 110 (301)
T ss_dssp SCEEEEEEECSCCH
T ss_pred CCCCEEEEcCccch
Confidence 47999999999984
No 287
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=37.30 E-value=10 Score=28.05 Aligned_cols=20 Identities=30% Similarity=0.499 Sum_probs=16.8
Q ss_pred HHHHHhcccCCcEEEEeccC
Q psy15213 68 LNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 68 L~~a~~~lk~gG~lvYsTCS 87 (139)
+..+.++|||||+++.++-.
T Consensus 161 l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 161 AEELARVVKPGGWVITATPG 180 (269)
T ss_dssp HHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEEEcC
Confidence 67788899999999998754
No 288
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=36.03 E-value=50 Score=25.65 Aligned_cols=24 Identities=17% Similarity=0.302 Sum_probs=19.8
Q ss_pred HHHHHHHHhcccC---CcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKP---GGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~---gG~lvYsTCS~ 88 (139)
.++|+++.+.||| ||+|+......
T Consensus 265 ~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 265 LRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp HHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 5789999999999 99998876543
No 289
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=35.07 E-value=82 Score=24.92 Aligned_cols=57 Identities=12% Similarity=0.043 Sum_probs=41.5
Q ss_pred CcEEEEeccCCCccccHHHHHHHHhhCCCcEEecCCCcccCCCC-CCCCCCcEEEEEEEe
Q psy15213 78 GGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRLNSPGQLLPTVN-KKQDYDGFFYSLFQK 136 (139)
Q Consensus 78 gG~lvYsTCS~~~~ENE~vV~~~l~~~~~~~~~~~~~~~~P~~~-~~~~~~GfFia~l~k 136 (139)
.|.++-.||.+...-..+.|..++++.|.+++.+. .. +|... ...+++..+|.++++
T Consensus 242 ~g~~~~~~~~l~~~~t~~ei~~~~~~~~~v~v~~~-~~-~p~~~~~v~g~~~~~vgr~~~ 299 (336)
T 2r00_A 242 YGHAEAVHVETRAPIDAEQVMDMLEQTDGIELFRG-AD-FPTQVRDAGGKDHVLVGRVRN 299 (336)
T ss_dssp BSEEEEEEEEESSCCCHHHHHHHHHHSTTEEECCC-CS-SGGGCCCCCSSSCEEEEEEEE
T ss_pred cEEEEEEEEEeCCCCCHHHHHHHHHhCCCeEEECC-CC-CCcCHHHhCCCceEEEEEEEe
Confidence 67888888887766677888999999887777663 22 55332 347889999998874
No 290
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=34.20 E-value=52 Score=25.59 Aligned_cols=24 Identities=29% Similarity=0.466 Sum_probs=19.7
Q ss_pred HHHHHHHHhcccC---CcEEEEeccCC
Q psy15213 65 CKILNNLWKMLKP---GGKLLFVTCSL 88 (139)
Q Consensus 65 ~~lL~~a~~~lk~---gG~lvYsTCS~ 88 (139)
.++|+++.+.|+| ||+|+......
T Consensus 270 ~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 270 LKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp HHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 5789999999999 99988865543
No 291
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=34.06 E-value=25 Score=26.03 Aligned_cols=22 Identities=14% Similarity=0.458 Sum_probs=18.9
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
.++|.++.+.|| ||.++..++.
T Consensus 111 ~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 111 EKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp HHHHHHHHHHBC-SSCEEEEEEC
T ss_pred HHHHHHHHHHhC-CcEEEEEEcC
Confidence 477899999999 9988888876
No 292
>1ffk_I Ribosomal protein L15E; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: d.12.1.2
Probab=33.65 E-value=16 Score=27.71 Aligned_cols=25 Identities=28% Similarity=0.808 Sum_probs=19.4
Q ss_pred CcCEEEEcCCCCCccccccCCCCCccCC
Q psy15213 26 YFDRILADLPCTGSGVVRRNPDIPWLRR 53 (139)
Q Consensus 26 ~fD~ILlDaPCSg~G~~~r~p~~~~~~~ 53 (139)
.|.+|||||-.. .++++|++.|--.
T Consensus 128 ~yEVILVDp~H~---aIr~Dp~~nWI~~ 152 (194)
T 1ffk_I 128 WFEVILVDRDHP---AIKSDPQLSWVSR 152 (194)
T ss_pred EEEEEEEcCCcH---hhhcCcccccccc
Confidence 588999999854 5688999888543
No 293
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=33.10 E-value=17 Score=29.01 Aligned_cols=23 Identities=22% Similarity=0.380 Sum_probs=19.5
Q ss_pred HHHHHHHHHhcccCCcEEEEecc
Q psy15213 64 SCKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 64 Q~~lL~~a~~~lk~gG~lvYsTC 86 (139)
...+|+.+.++|||||+++.++-
T Consensus 187 ~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 187 VQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEEeC
Confidence 36788999999999999999753
No 294
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=32.23 E-value=15 Score=30.12 Aligned_cols=30 Identities=30% Similarity=0.339 Sum_probs=22.0
Q ss_pred HHHHHHHhcccCCcEEEEeccCCC--ccccHH
Q psy15213 66 KILNNLWKMLKPGGKLLFVTCSLW--FEESEE 95 (139)
Q Consensus 66 ~lL~~a~~~lk~gG~lvYsTCS~~--~~ENE~ 95 (139)
.++...-++|||||.++-+.+++. |.|.+.
T Consensus 170 ~~l~a~~r~Lkp~G~~iP~~atly~apie~~~ 201 (376)
T 4hc4_A 170 SVLHARTKWLKEGGLLLPASAELFIVPISDQM 201 (376)
T ss_dssp HHHHHHHHHEEEEEEEESCEEEEEEEEECCHH
T ss_pred hHHHHHHhhCCCCceECCccceEEEEEeccch
Confidence 344444568999999999888876 666654
No 295
>3iz5_P 60S ribosomal protein L15 (L15E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_P 2zkr_m
Probab=32.12 E-value=18 Score=27.53 Aligned_cols=24 Identities=42% Similarity=0.915 Sum_probs=19.0
Q ss_pred CcCEEEEcCCCCCccccccCCCCCccC
Q psy15213 26 YFDRILADLPCTGSGVVRRNPDIPWLR 52 (139)
Q Consensus 26 ~fD~ILlDaPCSg~G~~~r~p~~~~~~ 52 (139)
.|.+|||||-. -.++++|++.|--
T Consensus 129 ~fEVILVDp~H---~aIr~Dp~~nWI~ 152 (204)
T 3iz5_P 129 YFEIILVDVAH---SAIRNDPRINWLC 152 (204)
T ss_dssp EEEEEEEESSS---HHHHTCTTTGGGT
T ss_pred eEEEEEecCCc---hhhccCCcccccc
Confidence 47899999984 4678899988854
No 296
>1vq8_M 50S ribosomal protein L15E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.12.1.2 PDB: 1vq4_M* 1vq5_M* 1vq6_M* 1vq7_M* 1s72_M* 1vqn_M* 2otj_M* 2otl_M* 2qex_M* 2qa4_M* 1vqo_M* 1vq9_M* 1vql_M* 1vqm_M* 1vqk_M* 1vqp_M* 1yij_M* 1yi2_M* 1yit_M* 1yj9_M* ...
Probab=31.63 E-value=15 Score=27.72 Aligned_cols=24 Identities=21% Similarity=0.552 Sum_probs=19.2
Q ss_pred CcCEEEEcCCCCCccccccCCCCCccC
Q psy15213 26 YFDRILADLPCTGSGVVRRNPDIPWLR 52 (139)
Q Consensus 26 ~fD~ILlDaPCSg~G~~~r~p~~~~~~ 52 (139)
.|.+|||||-. -.++++|++.|--
T Consensus 128 ~yEVILVDp~H---~aIr~Dp~~nWI~ 151 (194)
T 1vq8_M 128 WHEVILIDPNH---PAIQNDDDLSWIC 151 (194)
T ss_dssp EEEEEEECTTC---HHHHTCTTTGGGG
T ss_pred EEEEEEEcCCc---HhhhcCccccccc
Confidence 47899999984 4578899998854
No 297
>4a17_L RPL15, ribosomal protein L15; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_L 4a1c_L 4a1e_L
Probab=31.27 E-value=14 Score=28.20 Aligned_cols=24 Identities=33% Similarity=0.816 Sum_probs=18.9
Q ss_pred CcCEEEEcCCCCCccccccCCCCCccC
Q psy15213 26 YFDRILADLPCTGSGVVRRNPDIPWLR 52 (139)
Q Consensus 26 ~fD~ILlDaPCSg~G~~~r~p~~~~~~ 52 (139)
.|.+|||||-. -.++++|++.|--
T Consensus 129 ~fEVILVDp~H---~aIr~Dp~~nWI~ 152 (204)
T 4a17_L 129 FYEVILADPSH---NAIRNDPRINWIC 152 (204)
T ss_dssp EEEEEEECTTS---HHHHHCTTTGGGG
T ss_pred eEEEEEecCCc---hhhccCCcccccc
Confidence 47899999984 4678899988753
No 298
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=30.73 E-value=31 Score=28.15 Aligned_cols=28 Identities=18% Similarity=0.201 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 61 SKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 61 ~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
.+-...+|+.-.+-|+|||++|.++..-
T Consensus 201 ~~D~~~fL~~ra~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 201 QADLAEFLRARAAEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 3344556788888999999999988754
No 299
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=30.39 E-value=63 Score=26.41 Aligned_cols=67 Identities=9% Similarity=0.056 Sum_probs=38.7
Q ss_pred CCCcCEEEEcCCCCCccccccCCCCCccCCHhHHHHHHHHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 24 NKYFDRILADLPCTGSGVVRRNPDIPWLRRKNDIKKLSKYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
+..||+||=|.--.-+|. ++.+.. .+ .. +=...|.-|.+.|+|||.+|-= -+.-+. ++.+..+.+.
T Consensus 167 ~~k~DLVISDMAPNtTG~--~D~d~~--Rs-~~------L~ElALdfA~~~LkpGGsFvVK--VFQGsg-~~~L~~lrk~ 232 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKH--VTKEND--SK-EG------FFTYLCGFIKQKLALGGSIAVK--ITEHSW-NADLYKLMGH 232 (344)
T ss_dssp SSCEEEEEECCCCTTSCS--SCSCCC--CC-CT------HHHHHHHHHHHHEEEEEEEEEE--ECSSSC-CHHHHHHHTT
T ss_pred CCCCCEEEecCCCCcCCc--cccchh--HH-HH------HHHHHHHHHHHhCcCCCEEEEE--EecCCC-HHHHHHHHhh
Confidence 478999999977666676 222210 01 11 2234466677899999998752 233333 3445555553
Q ss_pred C
Q psy15213 104 H 104 (139)
Q Consensus 104 ~ 104 (139)
+
T Consensus 233 F 233 (344)
T 3r24_A 233 F 233 (344)
T ss_dssp E
T ss_pred C
Confidence 3
No 300
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=29.73 E-value=96 Score=23.42 Aligned_cols=40 Identities=20% Similarity=0.147 Sum_probs=29.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhhCCCcEEe
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKNHKDSIRL 110 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~~~~~~~~ 110 (139)
.+||..+...++++|++|-+.- .+++.|...|..+ +|.+.
T Consensus 105 ~~IL~~~~~~l~~~~~lIlqp~-----~~~~~lr~~L~~~-Gf~i~ 144 (230)
T 3lec_A 105 ADILNNDIDKLQHVKTLVLQPN-----NREDDLRKWLAAN-DFEIV 144 (230)
T ss_dssp HHHHHHTGGGGTTCCEEEEEES-----SCHHHHHHHHHHT-TEEEE
T ss_pred HHHHHHHHHHhCcCCEEEEECC-----CChHHHHHHHHHC-CCEEE
Confidence 6688999999999999998763 3466666667665 45443
No 301
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=28.96 E-value=21 Score=28.19 Aligned_cols=22 Identities=36% Similarity=0.607 Sum_probs=19.0
Q ss_pred HHHHHHHHhcccCCcEEEEecc
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTC 86 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTC 86 (139)
.++|+++.+.|||||+|+.+..
T Consensus 286 ~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 286 IEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEe
Confidence 5789999999999999988754
No 302
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=27.79 E-value=67 Score=26.03 Aligned_cols=31 Identities=16% Similarity=0.292 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHhcccCCcEEEEeccCC
Q psy15213 58 KKLSKYSCKILNNLWKMLKPGGKLLFVTCSL 88 (139)
Q Consensus 58 ~~l~~~Q~~lL~~a~~~lk~gG~lvYsTCS~ 88 (139)
++..+--...|+.-.+-|+|||++|.++..-
T Consensus 182 ~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 182 KQFQEDHALFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp HHHHHHHHHHHHHHHHHBCTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEEEecC
Confidence 4555555667888888999999999987644
No 303
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=27.52 E-value=86 Score=25.26 Aligned_cols=22 Identities=23% Similarity=0.531 Sum_probs=15.0
Q ss_pred CCCcCEEEEcCCCCCccccccC
Q psy15213 24 NKYFDRILADLPCTGSGVVRRN 45 (139)
Q Consensus 24 ~~~fD~ILlDaPCSg~G~~~r~ 45 (139)
...+|.|+.+|||-+--..+++
T Consensus 69 ~~~~D~i~ggpPCQ~fS~ag~~ 90 (376)
T 3g7u_A 69 DMPIDGIIGGPPCQGFSSIGKG 90 (376)
T ss_dssp CCCCCEEEECCCCCTTC-----
T ss_pred CCCeeEEEecCCCCCcccccCC
Confidence 3579999999999988777654
No 304
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=26.12 E-value=3.8 Score=30.64 Aligned_cols=17 Identities=12% Similarity=-0.044 Sum_probs=12.8
Q ss_pred HHHHhcccCCcEEEEec
Q psy15213 69 NNLWKMLKPGGKLLFVT 85 (139)
Q Consensus 69 ~~a~~~lk~gG~lvYsT 85 (139)
..|.++|+|||.++..+
T Consensus 129 e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 129 GFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SHHHHHHCGGGSHHHHT
T ss_pred HHHHHHhCCCCchhhhh
Confidence 56778899999876544
No 305
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=26.05 E-value=64 Score=25.36 Aligned_cols=28 Identities=14% Similarity=0.090 Sum_probs=24.0
Q ss_pred cCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 76 KPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 76 k~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
+.||.++-.-|.+.|.-..++|.++++-
T Consensus 315 ~~~g~I~~~Ghgi~p~tp~env~a~v~a 342 (348)
T 4ay7_A 315 EGGIDVLAPGCGIAPMTPLENVKALVAA 342 (348)
T ss_dssp HTTCSEEEESSSCCTTCCHHHHHHHHHH
T ss_pred hCCCCEEeCCCccCCCCCHHHHHHHHHH
Confidence 4688888889999999999999998763
No 306
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=25.77 E-value=50 Score=26.97 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhcccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 62 KYSCKILNNLWKMLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 62 ~~Q~~lL~~a~~~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
+.|.+|.++-+..++.| -+|--|||+.+. +..+.|+.
T Consensus 153 ~~t~~Iakkii~~lpEg-AII~nTCTipp~----~ly~~le~ 189 (358)
T 2b0j_A 153 NKQPDIIKKFADAIPEG-AIVTHACTIPTT----KFAKIFKD 189 (358)
T ss_dssp TTHHHHHHHHGGGSCTT-CEEEECSSSCHH----HHHHHHHH
T ss_pred CCcHHHHHHHHhhCcCC-CEEecccCCCHH----HHHHHHHH
Confidence 35899999999999765 677889999984 55555554
No 307
>3o3m_B Beta subunit 2-hydroxyacyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_B* 3o3o_B
Probab=25.73 E-value=37 Score=27.43 Aligned_cols=22 Identities=18% Similarity=-0.056 Sum_probs=17.2
Q ss_pred HHHhcccC-CcEEEEeccCCCcc
Q psy15213 70 NLWKMLKP-GGKLLFVTCSLWFE 91 (139)
Q Consensus 70 ~a~~~lk~-gG~lvYsTCS~~~~ 91 (139)
.+.+.-+. |+.+|-.+|++.|+
T Consensus 18 ~~~~~k~~~G~kvVG~~c~~~P~ 40 (385)
T 3o3m_B 18 AVKKYKSETGKKAIGCFPVYCPE 40 (385)
T ss_dssp HHHHHHHHHCCCEEEECSSCCCH
T ss_pred HHHHHHHHcCCeEEEEEcCcCCH
Confidence 34445566 88899999999996
No 308
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=24.99 E-value=32 Score=23.95 Aligned_cols=14 Identities=14% Similarity=0.031 Sum_probs=11.3
Q ss_pred CCcCEEEEcCCCCC
Q psy15213 25 KYFDRILADLPCTG 38 (139)
Q Consensus 25 ~~fD~ILlDaPCSg 38 (139)
..||.||+|.|-+-
T Consensus 74 ~~yD~viiD~~~~~ 87 (206)
T 4dzz_A 74 ADYDFAIVDGAGSL 87 (206)
T ss_dssp TTSSEEEEECCSSS
T ss_pred CCCCEEEEECCCCC
Confidence 46999999999553
No 309
>4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B*
Probab=24.70 E-value=20 Score=25.20 Aligned_cols=10 Identities=40% Similarity=0.806 Sum_probs=7.7
Q ss_pred EcCCCCCccc
Q psy15213 32 ADLPCTGSGV 41 (139)
Q Consensus 32 lDaPCSg~G~ 41 (139)
+||||.....
T Consensus 1 ~dPPC~d~~~ 10 (155)
T 4az3_B 1 MDPPCTNTTA 10 (155)
T ss_dssp CCCTTCCCHH
T ss_pred CCCCccCchH
Confidence 6999997653
No 310
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=24.66 E-value=29 Score=27.56 Aligned_cols=20 Identities=35% Similarity=0.546 Sum_probs=9.5
Q ss_pred CcCEEEEcCCCCCccccccC
Q psy15213 26 YFDRILADLPCTGSGVVRRN 45 (139)
Q Consensus 26 ~fD~ILlDaPCSg~G~~~r~ 45 (139)
.+|.|+.+|||-+-...+++
T Consensus 68 ~~D~l~~gpPCq~fS~ag~~ 87 (343)
T 1g55_A 68 SFDMILMSPPCQPFTRIGRQ 87 (343)
T ss_dssp CCSEEEECCC----------
T ss_pred CcCEEEEcCCCcchhhcCCc
Confidence 69999999999988776543
No 311
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=23.95 E-value=1.5e+02 Score=27.56 Aligned_cols=22 Identities=18% Similarity=0.428 Sum_probs=18.2
Q ss_pred HHHHHHHHhcccCCcEEEEeccC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCS 87 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS 87 (139)
..++..+.+.|||| .++.+|..
T Consensus 815 ~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 815 CEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp HHHHHHHHHTTCCS-EEEEEECB
T ss_pred HHHHHHHHHHcCCC-EEEEEecC
Confidence 46788999999999 88887754
No 312
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=23.12 E-value=73 Score=24.97 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=25.1
Q ss_pred cccCCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 74 MLKPGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 74 ~lk~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
.+.++|.++-..|.+.+....+++.++.+.
T Consensus 318 ~~~~~g~I~~~g~gi~~~~~~enl~a~ve~ 347 (353)
T 1j93_A 318 KAGKGKHILNLGHGIKVGTPEENFAHFFEI 347 (353)
T ss_dssp HHCSSSEEBCBSSCCCTTCCHHHHHHHHHH
T ss_pred HhCCCCEEEeCCCCCCCCCCHHHHHHHHHH
Confidence 334578999999999999999999998763
No 313
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=23.09 E-value=2.1e+02 Score=22.03 Aligned_cols=12 Identities=25% Similarity=0.124 Sum_probs=10.0
Q ss_pred cCEEEEcCCCCC
Q psy15213 27 FDRILADLPCTG 38 (139)
Q Consensus 27 fD~ILlDaPCSg 38 (139)
=|.|.+|||.-.
T Consensus 188 ~~fvY~DPPY~~ 199 (284)
T 2dpm_A 188 GDFVYFDPPYIP 199 (284)
T ss_dssp TCEEEECCCCCC
T ss_pred CCEEEeCCCccc
Confidence 379999999864
No 314
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=22.56 E-value=32 Score=24.61 Aligned_cols=13 Identities=8% Similarity=0.174 Sum_probs=10.9
Q ss_pred CCcCEEEEcCCCC
Q psy15213 25 KYFDRILADLPCT 37 (139)
Q Consensus 25 ~~fD~ILlDaPCS 37 (139)
..||.||+|.|-+
T Consensus 130 ~~yD~viiD~pp~ 142 (254)
T 3kjh_A 130 DKKEAVVMDMGAG 142 (254)
T ss_dssp TCCSEEEEEECTT
T ss_pred CCCCEEEEeCCCc
Confidence 5799999998854
No 315
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=22.20 E-value=70 Score=28.26 Aligned_cols=38 Identities=11% Similarity=-0.033 Sum_probs=31.7
Q ss_pred HHHHHHHHhcccCCcEEEEeccCC----CccccHHHHHHHHh
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSL----WFEESEEQAIIFSK 102 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~----~~~ENE~vV~~~l~ 102 (139)
.+.+.+|.++|+.||+|+|-|=+. ....|++.|+++.+
T Consensus 111 ~~~i~~aa~~L~~G~IVa~pt~ggYgL~cda~n~~AV~rL~~ 152 (657)
T 3ttc_A 111 EAALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLRA 152 (657)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSEEEEEETTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCEEEEECCceeEEEeecCCHHHHHHHHH
Confidence 467889999999999999999885 35678999999864
No 316
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=21.63 E-value=39 Score=25.09 Aligned_cols=13 Identities=38% Similarity=0.554 Sum_probs=11.1
Q ss_pred CCcCEEEEcCCCC
Q psy15213 25 KYFDRILADLPCT 37 (139)
Q Consensus 25 ~~fD~ILlDaPCS 37 (139)
..||.||+|.|-+
T Consensus 127 ~~yD~ViID~pp~ 139 (262)
T 2ph1_A 127 GELDHLLIDLPPG 139 (262)
T ss_dssp CSCSEEEEECCSS
T ss_pred cCCCEEEEECcCC
Confidence 5799999999854
No 317
>3l7v_A Putative uncharacterized protein SMU.1377C; transcription; 2.26A {Streptococcus mutans}
Probab=21.60 E-value=51 Score=26.27 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=28.8
Q ss_pred HHHHHHHhccc-CCcEEEEeccCCC--ccccHHHHHHHHh
Q psy15213 66 KILNNLWKMLK-PGGKLLFVTCSLW--FEESEEQAIIFSK 102 (139)
Q Consensus 66 ~lL~~a~~~lk-~gG~lvYsTCS~~--~~ENE~vV~~~l~ 102 (139)
+.+.+|.++|+ .||.++|-|=|.. --.|++.|+++.+
T Consensus 44 ~~i~~Aa~~L~~~GgIVa~PTdTvYGL~c~n~~AV~rL~~ 83 (295)
T 3l7v_A 44 NLSQEGFEIVKGEGGVIVCPTKVGYIIMTSDKKGLERKFE 83 (295)
T ss_dssp SCCHHHHHHHHSTTCEEEEEETTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCEEEEEEcCHHHHHHHHH
Confidence 35778889999 9999999886654 1278999998854
No 318
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=21.56 E-value=28 Score=27.73 Aligned_cols=14 Identities=29% Similarity=0.401 Sum_probs=11.8
Q ss_pred CCcCEEEEcCCCCC
Q psy15213 25 KYFDRILADLPCTG 38 (139)
Q Consensus 25 ~~fD~ILlDaPCSg 38 (139)
..||+|++|.|-+|
T Consensus 137 ~~yD~VIiDtpPtg 150 (334)
T 3iqw_A 137 LSYETIVFDTAPTG 150 (334)
T ss_dssp SSCSEEEEECCCHH
T ss_pred CCCCEEEEeCCCCH
Confidence 57999999999754
No 319
>1gwm_A NCP1, non-catalytic protein 1; carbohydrate binding domain, glucomannan, cellohexaose, mannohexaose, cellulosome; HET: GLC BGC; 1.15A {Piromyces equi} SCOP: b.18.1.19 PDB: 1gwk_A* 1gwl_A* 1w90_A 1w8t_A* 1w8u_A* 1w8w_A 1w8z_A 1w9f_A 1oh3_A*
Probab=21.05 E-value=41 Score=23.85 Aligned_cols=19 Identities=37% Similarity=0.480 Sum_probs=14.6
Q ss_pred CCCcCEEEE-cCCCCCcccc
Q psy15213 24 NKYFDRILA-DLPCTGSGVV 42 (139)
Q Consensus 24 ~~~fD~ILl-DaPCSg~G~~ 42 (139)
.-.||+|.+ |+|-||...+
T Consensus 107 ~~~FDRI~~QD~P~~~~~I~ 126 (153)
T 1gwm_A 107 DLPFDRIDFQDAPGNGDRIW 126 (153)
T ss_dssp SSCBCEEEEEETTCSCCCEE
T ss_pred cccccEEEEecCCCCCCeEE
Confidence 457998765 9998888664
No 320
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=20.82 E-value=49 Score=27.14 Aligned_cols=40 Identities=13% Similarity=0.070 Sum_probs=27.3
Q ss_pred HHHHHHHHhcccCCcEEEEeccCCC-cccc-HHHHHHHHhhC
Q psy15213 65 CKILNNLWKMLKPGGKLLFVTCSLW-FEES-EEQAIIFSKNH 104 (139)
Q Consensus 65 ~~lL~~a~~~lk~gG~lvYsTCS~~-~~EN-E~vV~~~l~~~ 104 (139)
++.+.++.+..+|..++||+||... .-++ +.+++.+-+++
T Consensus 86 ~~~i~~~~~~~~P~~I~v~~TC~~~iIGdDi~~v~~~~~~~~ 127 (460)
T 2xdq_A 86 KRLCLEIKRDRNPSVIVWIGTCTTEIIKMDLEGLAPKLEAEI 127 (460)
T ss_dssp HHHHHHHHHHHCCSEEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEECCCHHHHHhhCHHHHHHHHhhcc
Confidence 6667777777799999999999877 3344 34444443343
No 321
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=20.74 E-value=1.4e+02 Score=23.55 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=23.9
Q ss_pred CCcEEEEeccCCCccccHHHHHHHHhh
Q psy15213 77 PGGKLLFVTCSLWFEESEEQAIIFSKN 103 (139)
Q Consensus 77 ~gG~lvYsTCS~~~~ENE~vV~~~l~~ 103 (139)
+||.++-..|.+.+.-+.++|.++++.
T Consensus 330 ~~g~I~~~ghgi~~~~p~env~a~v~~ 356 (367)
T 1r3s_A 330 PHRYIANLGHGLYPDMDPEHVGAFVDA 356 (367)
T ss_dssp SSSEEEEESSCCCTTCCHHHHHHHHHH
T ss_pred CCCeeecCCCCCCCCCCHHHHHHHHHH
Confidence 489999999999999999999998763
No 322
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=20.33 E-value=72 Score=26.97 Aligned_cols=40 Identities=13% Similarity=0.092 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhcccCCcEEEEeccCCC-ccccHHHHHHHHh
Q psy15213 63 YSCKILNNLWKMLKPGGKLLFVTCSLW-FEESEEQAIIFSK 102 (139)
Q Consensus 63 ~Q~~lL~~a~~~lk~gG~lvYsTCS~~-~~ENE~vV~~~l~ 102 (139)
.-++.+.++.+..+|..+.||+||... .-++-+-|.+-++
T Consensus 72 kL~~aI~~~~~~~~P~~I~V~tTC~~elIGdDi~~v~~~~~ 112 (525)
T 3aek_B 72 LLKDALAAAHARYKPQAMAVALTCTAELLQDDPNGISRALN 112 (525)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEECTTGGGSCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCEEEEECCcHHHHhcccHHHHHHHhc
Confidence 446667777777799999999999887 3444343333333
No 323
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=20.14 E-value=56 Score=27.17 Aligned_cols=19 Identities=21% Similarity=0.356 Sum_probs=15.7
Q ss_pred HHHHHHHhcccCCcEEEEe
Q psy15213 66 KILNNLWKMLKPGGKLLFV 84 (139)
Q Consensus 66 ~lL~~a~~~lk~gG~lvYs 84 (139)
+.|....+.|||||+||.+
T Consensus 340 ~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 340 KKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHHHHHTTCCTTCEEEES
T ss_pred HHHHHHHHhCCCCeEEEEe
Confidence 3467888899999999886
No 324
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=20.10 E-value=65 Score=26.40 Aligned_cols=29 Identities=17% Similarity=0.060 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhcccCCcEEEEeccCCC
Q psy15213 61 SKYSCKILNNLWKMLKPGGKLLFVTCSLW 89 (139)
Q Consensus 61 ~~~Q~~lL~~a~~~lk~gG~lvYsTCS~~ 89 (139)
.+--...|+.-.+-|+|||++|.++..-.
T Consensus 201 ~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~ 229 (384)
T 2efj_A 201 TKDFTTFLRIHSEELISRGRMLLTFICKE 229 (384)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHhccCCeEEEEEecCC
Confidence 33344457777888999999999887553
Done!