BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15214
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JWI7|BICOA_NEIMA Bifunctional enzyme BirA/CoaX OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=birA/coaX PE=3 SV=1
Length = 592
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 7/233 (3%)
Query: 36 STNSNLLSIANTGL-LFHPTFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKY 94
S+N +L +A H T T +Q+ GRGR GR W L FS W F
Sbjct: 92 SSNDEILELARIAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYE 151
Query: 95 LTSLPLVISIALSIALKKFGQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIG 154
L SL V ++A AL + G K Q+KWPNDL++ +K GILI+T + A++GIG
Sbjct: 152 LGSLSPVAAVACRRALSRLGLKTQIKWPNDLVVGRDKLGGILIET-VRTGGKTVAVVGIG 210
Query: 155 LNLGLPRILSKKINIGNI----SELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYW 210
+N LP+ + ++ ++ S N + LL + L L + GF+ F+ +
Sbjct: 211 INFVLPKEVENAASVQSLFQTASRRGNADAAVLLETLLAELDAVLLQYARDGFAPFVAEY 270
Query: 211 NFNHAYTNKTVDILKLNK-IQKGIVIGINKNGCLLLNTKFGKITISSGDVSLR 262
+ K V +L+ + + +G V G++ G L L T GK T+ SG++SLR
Sbjct: 271 QAANRDHGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLR 323
>sp|Q5F5C8|BICOA_NEIG1 Bifunctional enzyme BirA/CoaX OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=birA/coaX PE=3 SV=1
Length = 592
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 7/233 (3%)
Query: 36 STNSNLLSIANTGL-LFHPTFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKY 94
S+N +L +A H T T +Q+ GRGR GR W L FS W F
Sbjct: 92 SSNDEILELARIAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWAFDRPQYE 151
Query: 95 LTSLPLVISIALSIALKKFGQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIG 154
L SL V ++A AL G + Q+KWPNDL++ +K GILI+T + A++GIG
Sbjct: 152 LGSLSPVAALACRRALGCLGLETQIKWPNDLVVGRDKLGGILIET-VRAGGKTVAVVGIG 210
Query: 155 LNLGLPRILSKKINIGNI----SELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYW 210
+N LP+ + ++ ++ S N + LL + L L+ + GF+ F+ +
Sbjct: 211 INFVLPKEVENAASVQSLFQTASRRGNADAAVLLETLLAELGAVLEQYAEEGFAPFLNEY 270
Query: 211 NFNHAYTNKTVDILKLNK-IQKGIVIGINKNGCLLLNTKFGKITISSGDVSLR 262
+ K V +L+ + + +G V G++ G L L T G+ T+ SG++SLR
Sbjct: 271 ETANRDHGKAVLLLRDGETVCEGTVKGVDGRGVLHLETAEGEQTVVSGEISLR 323
>sp|P06709|BIRA_ECOLI Bifunctional protein BirA OS=Escherichia coli (strain K12) GN=birA
PE=1 SV=1
Length = 321
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 115/232 (49%), Gaps = 6/232 (2%)
Query: 35 NSTNSNLLSIANTGLLFHPTFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKY 94
+STN LL G L + Q AGRGR GR W+S L S+ W+ +
Sbjct: 88 DSTNQYLLD--RIGELKSGDACIAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAA 145
Query: 95 LTSLPLVISIALSIALKKFG-QKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGI 153
L LVI I ++ L+K G KV++KWPNDL L K GIL++ + + +IG
Sbjct: 146 AIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGA 205
Query: 154 GLNLGLPRILSKKINIGNIS---ELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYW 210
G+N+ + R+ +N G I+ +N++ L A+ I L +L+LFE G + ++ W
Sbjct: 206 GINMAMRRVEESVVNQGWITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRW 265
Query: 211 NFNHAYTNKTVDILKLNKIQKGIVIGINKNGCLLLNTKFGKITISSGDVSLR 262
+ N+ V ++ +K GI GI+K G LLL G++SLR
Sbjct: 266 EKLDNFINRPVKLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLR 317
>sp|Q9JXF1|BICOA_NEIMB Bifunctional enzyme BirA/CoaX OS=Neisseria meningitidis serogroup B
(strain MC58) GN=birA/coaX PE=3 SV=1
Length = 592
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 7/233 (3%)
Query: 36 STNSNLLSIANTGL-LFHPTFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKY 94
S+N +L +A H T T +Q+ GRGR GR W L FS W F
Sbjct: 92 SSNDEILELARIAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYE 151
Query: 95 LTSLPLVISIALSIALKKFGQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIG 154
L SL V ++A AL + G VQ+KWPNDL++ +K GILI+T + A++GIG
Sbjct: 152 LGSLSPVAAVACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIET-VRTGGKTVAVVGIG 210
Query: 155 LNLGLPRILSKKINIGNI----SELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYW 210
+N LP+ + ++ ++ S N + LL + L L + GF+ F+ +
Sbjct: 211 INFVLPKEVENAASVQSLFQTASRRGNADAAVLLETLLVELDAVLLQYARDGFAPFVAEY 270
Query: 211 NFNHAYTNKTVDILKLNK-IQKGIVIGINKNGCLLLNTKFGKITISSGDVSLR 262
+ K V +L+ + + +G V G++ G L L T GK T+ SG++SLR
Sbjct: 271 QAANRDHGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLR 323
>sp|P37416|BIRA_SALTY Bifunctional protein BirA OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=birA PE=3 SV=2
Length = 320
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 112/232 (48%), Gaps = 6/232 (2%)
Query: 35 NSTNSNLLSIANTGLLFHPTFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKY 94
+STN LL G L + Q AGRGR GR W+S L S+ W+ +
Sbjct: 88 DSTNQYLLD--RIGELRSGDACVAEYQQAGRGRRGRKWFSPFGANLYLSMYWRLEQGPAA 145
Query: 95 LTSLPLVISIALSIALKKFG-QKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGI 153
L LVI I ++ L+K G KV++KWPNDL L K GIL++ + + +IG
Sbjct: 146 AIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLLDRKLAGILVELTGKTGDAAQIVIGA 205
Query: 154 GLNLGLPRILSKKINIGNIS---ELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYW 210
G+N+ + R+ IN G I+ + ++ L A I L +L+LFE G S ++ W
Sbjct: 206 GINMAMRRVEEDVINQGWITLQEAGITLDRNMLAAKLIYKLRAALELFEQEGLSPYLSRW 265
Query: 211 NFNHAYTNKTVDILKLNKIQKGIVIGINKNGCLLLNTKFGKITISSGDVSLR 262
+ ++ V ++ +K GI GI+ G LLL G++SLR
Sbjct: 266 KKLDNFIDRPVKLIIGDKEIFGISRGIDTQGALLLEQDGVIKPWMGGEISLR 317
>sp|P46363|BIRA_HAEIN Bifunctional protein BirA OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=birA PE=3 SV=1
Length = 302
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 124/263 (47%), Gaps = 24/263 (9%)
Query: 8 LNTSRIKNLYYNYNTDTKIDIRTILSTNSTNS----NLLSIANTGLLFHPTFLATKIQTA 63
LN +I + Y+ I + I+S STN N+LS+ L + QTA
Sbjct: 58 LNPQQISTALFPYS----IHYQPIIS--STNEWILQNILSLKKGDLC------VAEYQTA 105
Query: 64 GRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKFGQKVQLKWPN 123
GRGR GR W S + FS W F K + L LVI +A++ L VQ+KWPN
Sbjct: 106 GRGRRGRQWLSPFAGQIMFSFYWAFDPK-KSIEGLSLVIGLAIAEVLN-----VQVKWPN 159
Query: 124 DLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLPRILSKKINIGNISEL-LNMEHEK 182
D+L + K GIL++ K +IGIG+N+ L + + E+ ++E +
Sbjct: 160 DILFDERKLGGILVEIANHKNGMLNLVIGIGINVSLSKQTEISQPYAEVCEIDPDVERQT 219
Query: 183 LLAVFICYLIDSLKLFEHYGF-SIFMKYWNFNHAYTNKTVDILKLNKIQKGIVIGINKNG 241
LL I +L L +FE G F + W +A++N +++L + GI GI++ G
Sbjct: 220 LLPKLIQHLYTRLNIFEQNGIDEEFQQAWQSYNAFSNSEINVLTEQGVISGIEQGIDERG 279
Query: 242 CLLLNTKFGKITISSGDVSLRLK 264
L + + G+VSLR K
Sbjct: 280 YLKVLCGNKIQMFNGGEVSLRKK 302
>sp|P0CI75|BIRA_BACSU Bifunctional protein BirA OS=Bacillus subtilis (strain 168) GN=birA
PE=1 SV=1
Length = 325
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 34/228 (14%)
Query: 54 TFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKF 113
T + QTAGRGR R+W+S+ + SL + I L+ L L+ ++A+ +++
Sbjct: 111 TLVVADKQTAGRGRMSRVWHSQEGNGVWMSLILRPDIPLQKTPQLTLLAAVAVVQGIEEA 170
Query: 114 -GQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNL--------------- 157
G + +KWPND+L+NG K GIL + E+ IIGIG+N+
Sbjct: 171 AGIQTDIKWPNDILINGKKTVGILTEMQAEEDRVRSVIIGIGINVNQQPNDFPDELKDIA 230
Query: 158 -GLPRILSKKINIGNISELLNMEHEKLLAVFICYLIDSLK-LFEHYGFSIF--MKYWNFN 213
L + +KI+ + + + + EK ++ + +K L+E Y I M+ N
Sbjct: 231 TSLSQAAGEKIDRAGVIQHILLCFEKRYRDYMTHGFTPIKLLWESYALGIGTNMRARTLN 290
Query: 214 HAYTNKTVDILKLNKIQKGIVIGINKNGCLLLNTKFGKITISSGDVSL 261
+ K +GI+ G LLL T G I S D+ L
Sbjct: 291 GTFYGK--------------ALGIDDEGVLLLETNEGIKKIYSADIEL 324
>sp|E0U174|BIRA_BACPZ Bifunctional protein BirA OS=Bacillus subtilis subsp. spizizenii
(strain ATCC 23059 / NRRL B-14472 / W23) GN=birA PE=3
SV=1
Length = 325
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 34/228 (14%)
Query: 54 TFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKF 113
T + QTAGRGR R+W+S+ + SL + I L+ L L+ ++A+ ++
Sbjct: 111 TLVVADKQTAGRGRMSRVWHSQEGNGIWMSLILRPDIPLQKTPQLTLLAAVAVVQGIEAA 170
Query: 114 -GQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNL--------------- 157
G + +KWPND+L+NG K GIL + E+ IIGIG+N+
Sbjct: 171 AGIQTDIKWPNDILINGKKTVGILTEMQAEEDRVRSVIIGIGINVNQQSDDFPDELKDIA 230
Query: 158 -GLPRILSKKINIGNISELLNMEHEKLLAVFICYLIDSLK-LFEHYGFSIF--MKYWNFN 213
L + +KI+ + + + + EK ++ + +K L+E Y I M+ N
Sbjct: 231 TSLSQASGEKIDRAGVIQHILLCFEKRYRDYMTHGFTPIKLLWESYALGIGTNMRARTLN 290
Query: 214 HAYTNKTVDILKLNKIQKGIVIGINKNGCLLLNTKFGKITISSGDVSL 261
+ K +GI+ G LLL T+ G I S D+ L
Sbjct: 291 GTFYGK--------------ALGIDDEGVLLLETQEGIKKIYSADIEL 324
>sp|P29906|BIRA_PARDE Biotin--[acetyl-CoA-carboxylase] synthetase OS=Paracoccus
denitrificans GN=birA PE=3 SV=1
Length = 240
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 18/238 (7%)
Query: 34 TNSTNSNLLSIANTGLLFHPTFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLK 93
T+STN+ L +A L ++ + Q AGRGR GR W P +L + +
Sbjct: 5 TDSTNAEALKLAPG--LSGSAWVLAREQFAGRGRRGREWVM-PAGNFAGTLVLRPQGGAL 61
Query: 94 YLTSLPLVISIALSIALK---KFGQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAI 150
L V ++AL AL ++ +KWPND+LLNG K GIL+++
Sbjct: 62 AAAQLSFVAALALYDALGLACGPAARLAIKWPNDVLLNGGKVAGILLESSGSGPGVQAVA 121
Query: 151 IGIGLNL-GLPRILSKKINIGNISELLNMEHEKLLAVFICYLIDSLKL--------FEHY 201
+GIG+NL G P + + G + ++++ E AV +D L + Y
Sbjct: 122 VGIGVNLAGAPD--AGAVEPG-ATPPVSVQGETGHAVDPEEFLDLLAPAFARWQAQLDTY 178
Query: 202 GFSIFMKYWNFNHAYTNKTVDILKLNKIQKGIVIGINKNGCLLLNTKFGKITISSGDV 259
GF+ W A + + GI GI+ +G L+L G+ I + +V
Sbjct: 179 GFAPIRNAWLARAARLGEPIIARTGTAESHGIFEGIDDSGALILRGPAGRQVIPAAEV 236
>sp|Q59014|BPL_METJA Putative biotin ligase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ1619 PE=1 SV=1
Length = 237
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 25/235 (10%)
Query: 35 NSTNSNLLSIANTGLLFHPTFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKY 94
+STN +A G + LA K Q G+GR GR+WYS+ E L FS+ K L
Sbjct: 10 DSTNDYAKELAKEGKR-NFIVLADK-QNNGKGRWGRVWYSD-EGGLYFSMVLDSK--LYN 64
Query: 95 LTSLPLVISIALSIALKKF-GQKVQLKWPNDLLLNGN----KFCGILIDTCIEKKNNNWA 149
+ L++ I + LK + +++ LK+PND+++ N K GIL + +++
Sbjct: 65 PKVINLLVPICIIEVLKNYVDKELGLKFPNDIMVKVNDNYKKLGGILTELT-----DDYM 119
Query: 150 IIGIGLNLGLP-RILSKKINIGNISELLNMEHEKL------LAVFICYLIDSLKLFEHYG 202
IIGIG+N+ R ++I I ++ E+ E +K+ L F YL + LK E
Sbjct: 120 IIGIGINVNNQIRNEIREIAI-SLKEITGKELDKVEILSNFLKTFESYL-EKLKNKEIDD 177
Query: 203 FSIFMKYWNFNHAYTNKTVDILKLNKIQKGIVIGINKNGCLLLNTKFGKITISSG 257
+ I KY ++ + +L N+I G V I+ +G ++L T+ G I SG
Sbjct: 178 YEILKKYKKYSITIGKQVKILLSNNEIITGKVYDIDFDG-IVLGTEKGIERIPSG 231
>sp|O14353|BPL1_SCHPO Biotin--protein ligase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=bpl1 PE=3 SV=1
Length = 631
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 49/251 (19%)
Query: 28 IRTILSTNSTNSNLLSIANTGLLFHPTFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWK 87
IR+ + N L NTG T L QTAGRGR +W S P TL FS
Sbjct: 362 IRSTQTLLDKNYRFLDSTNTGF----TVLGN-YQTAGRGRGQNMWVS-PYGTLAFSFI-- 413
Query: 88 FKISLKYLTSLPL-----VISIALSIALKKFGQKVQ-----LKWPNDLLLNGN------- 130
+ K ++ P+ ++++A+ ++++ + +KWPND+ + +
Sbjct: 414 INVDAKNFSTTPIALFQYLMALAVVRGIREYAPGYENIPAFIKWPNDVYVRVDKGGINFQ 473
Query: 131 -----KFCGILIDTCIEKKNNNWAIIGIGL---NLGLPRILSKKINIGNI----SELLNM 178
K GI++ T +KN ++G G+ NLG L+ ++ N L
Sbjct: 474 GKQYMKLSGIIV-TSNYRKNVLHLVVGCGINVSNLGPTVSLNTLVDEWNKNSDNPRLEKF 532
Query: 179 EHEKLLAVFICYLIDSLKLFEHYGFSI----FMKYWNFNHAYTNKTVDILKLNKIQKGIV 234
EKLLA + +L GFS+ + +YW ++N+TV+ L K I+
Sbjct: 533 SFEKLLASVLNQFDRYHRLLLEEGFSLILPEYYQYW----LHSNQTVN---LASGGKAII 585
Query: 235 IGINKNGCLLL 245
GI + LL
Sbjct: 586 QGITSDFGFLL 596
>sp|P50747|BPL1_HUMAN Biotin--protein ligase OS=Homo sapiens GN=HLCS PE=1 SV=1
Length = 726
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 119/264 (45%), Gaps = 32/264 (12%)
Query: 18 YNYNTDTKIDIRTILSTNSTNSNLLSIANTGLLFH-PTFLATKI----QTAGRGRAGRIW 72
Y N TK + IL T + + + GL+F P + + QT G+GR G +W
Sbjct: 456 YRQNLQTKQLGKVILFAEVTPTTMRLL--DGLMFQTPQEMGLIVIAARQTEGKGRGGNVW 513
Query: 73 YSEPEITLTFSLAWKFKISLKYLTSLPLV---ISIALSIALKKFGQ----KVQLKWPNDL 125
S L+ +L + + +P V +S+A+ A++ + +++KWPND+
Sbjct: 514 LSPVGCALS-TLLISIPLRSQLGQRIPFVQHLMSVAVVEAVRSIPEYQDINLRVKWPNDI 572
Query: 126 LLNG-NKFCGILIDTCIEKKNNNWAIIGIGLNL--GLPRI----LSKKINIGNISELLNM 178
+ K G+L+++ + + +IG G N+ P I L + N + +EL +
Sbjct: 573 YYSDLMKIGGVLVNSTL-MGETFYILIGCGFNVTNSNPTICINDLITEYNKQHKAELKPL 631
Query: 179 EHEKLLAVFICYLIDSLKLFEHYG----FSIFMKYWNFNHAYTNKTVDILKLNKIQKGIV 234
+ L+A + L +K F+ G ++ +YW ++ + V L + K +
Sbjct: 632 RADYLIARVVTVLEKLIKEFQDKGPNSVLPLYYRYW----VHSGQQVH-LGSAEGPKVSI 686
Query: 235 IGINKNGCLLLNTKFGKITISSGD 258
+G++ +G L ++ + G++ D
Sbjct: 687 VGLDDSGFLQVHQEGGEVVTVHPD 710
>sp|Q9P3U0|UBP2_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp2 PE=1 SV=1
Length = 1141
Score = 33.5 bits (75), Expect = 1.5, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 155 LNLGLPRILSKKIN--IGNISEL------LNMEHEKLLAVFICYLIDSLKLFEHYGFSIF 206
+N LP IL ++IN + + L L E L +I + D L +F H G + F
Sbjct: 1015 INPKLPDILQEEINNVVAEVDMLKKQEASLKEERTHLFDNYISHSYDLLAVFVHRGQASF 1074
Query: 207 MKYWNFNHAYTN 218
YW + H + N
Sbjct: 1075 GHYWTYIHDFEN 1086
>sp|P48445|BPL1_YEAST Biotin--protein ligase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=BPL1 PE=1 SV=1
Length = 690
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 38 NSNLLSIANTGLLFHPTFLATKIQTAGRGRAGRIWYSEPEI---TLTFSLAWKFKIS--- 91
N +LLS L H IQ +GRGR G W + + T ++ + ++
Sbjct: 400 NKSLLSSIPESTLLH----VGTIQVSGRGRGGNTWINPKGVCASTAVVTMPLQSPVTNRN 455
Query: 92 -----LKYLTSLPLVISIALSIALKKFGQKVQLKWPNDL 125
++YL+ L +I LS A V++KWPNDL
Sbjct: 456 ISVVFVQYLSMLAYCKAI-LSYAPGFSDIPVRIKWPNDL 493
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,860,763
Number of Sequences: 539616
Number of extensions: 3839386
Number of successful extensions: 9459
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9431
Number of HSP's gapped (non-prelim): 15
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)