Your job contains 1 sequence.
>psy15214
MNIYSHSLNTSRIKNLYYNYNTDTKIDIRTILSTNSTNSNLLSIANTGLLFHPTFLATKI
QTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKFGQKVQLK
WPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLPRILSKKINIGNISELLNMEH
EKLLAVFICYLIDSLKLFEHYGFSIFMKYWNFNHAYTNKTVDILKLNKIQKGIVIGINKN
GCLLLNTKFGKITISSGDVSLRLKK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15214
(265 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P06709 - symbol:birA species:83333 "Escherichia... 270 1.8e-23 1
TIGR_CMR|CPS_4745 - symbol:CPS_4745 "birA bifunctional pr... 267 3.8e-23 1
TIGR_CMR|SO_0214 - symbol:SO_0214 "birA bifunctional prot... 244 1.0e-20 1
TIGR_CMR|CHY_2371 - symbol:CHY_2371 "BirA bifunctional pr... 241 2.1e-20 1
UNIPROTKB|Q9KV39 - symbol:VC_0319 "BirA bifunctional prot... 236 7.2e-20 1
TIGR_CMR|VC_0319 - symbol:VC_0319 "birA bifunctional prot... 236 7.2e-20 1
TIGR_CMR|CBU_1002 - symbol:CBU_1002 "birA bifunctional pr... 233 1.5e-19 1
TIGR_CMR|DET_0849 - symbol:DET_0849 "biotin--acetyl-CoA-c... 223 1.7e-18 1
UNIPROTKB|Q81ST5 - symbol:birA "BirA bifunctional protein... 222 2.2e-18 1
TIGR_CMR|BA_1560 - symbol:BA_1560 "birA bifunctional prot... 222 2.2e-18 1
TIGR_CMR|GSU_1935 - symbol:GSU_1935 "birA biofunctional p... 217 9.6e-18 1
TIGR_CMR|ECH_0848 - symbol:ECH_0848 "biotin--acetyl-CoA-c... 196 1.3e-15 1
TIGR_CMR|SPO_2762 - symbol:SPO_2762 "biotin--acetyl-CoA-c... 173 1.7e-12 1
TIGR_CMR|APH_0876 - symbol:APH_0876 "biotin--acetyl-CoA-c... 160 1.8e-10 1
TAIR|locus:2050291 - symbol:HCS1 "holocarboxylase synthas... 162 6.0e-10 1
TIGR_CMR|NSE_0693 - symbol:NSE_0693 "biotin--acetyl-CoA-c... 137 1.6e-07 1
TAIR|locus:2029642 - symbol:HCS2 "holocarboxylase synthet... 140 2.6e-07 1
FB|FBgn0037332 - symbol:Hcs "Holocarboxylase synthetase" ... 133 1.0e-05 1
TIGR_CMR|CJE_0094 - symbol:CJE_0094 "biotin--acetyl-CoA-c... 121 1.4e-05 1
UNIPROTKB|P96884 - symbol:birA "BirA bifunctional protein... 114 4.5e-05 2
>UNIPROTKB|P06709 [details] [associations]
symbol:birA species:83333 "Escherichia coli K-12"
[GO:0009102 "biotin biosynthetic process" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA;IDA] [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=IEA;IDA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003142 InterPro:IPR004143
InterPro:IPR004408 InterPro:IPR004409 Pfam:PF02237 Pfam:PF03099
PANTHER:PTHR12835 GO:GO:0005524 GO:GO:0006355 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
EMBL:U00006 GO:GO:0006464 PDB:1K67 PDBsum:1K67 GO:GO:0009102
EMBL:M10123 EMBL:M15820 EMBL:L14557 PIR:B24029 RefSeq:NP_418404.1
RefSeq:YP_491483.1 PDB:1BIA PDB:1BIB PDB:1HXD PDB:2EWN PDBsum:1BIA
PDBsum:1BIB PDBsum:1HXD PDBsum:2EWN DisProt:DP00349
ProteinModelPortal:P06709 SMR:P06709 DIP:DIP-9224N IntAct:P06709
MINT:MINT-1254106 EnsemblBacteria:EBESCT00000002534
EnsemblBacteria:EBESCT00000014366 GeneID:12934397 GeneID:948469
KEGG:ecj:Y75_p3219 KEGG:eco:b3973 PATRIC:32123467 EchoBASE:EB0121
EcoGene:EG10123 eggNOG:COG0340 HOGENOM:HOG000041812 KO:K03524
OMA:AVWKHIE ProtClustDB:PRK11886 BioCyc:EcoCyc:BIOTINLIG-MONOMER
BioCyc:ECOL316407:JW3941-MONOMER BioCyc:MetaCyc:BIOTINLIG-MONOMER
EvolutionaryTrace:P06709 Genevestigator:P06709 GO:GO:0004077
InterPro:IPR013196 InterPro:IPR008988 Pfam:PF08279 SUPFAM:SSF50037
TIGRFAMs:TIGR00121 TIGRFAMs:TIGR00122 Uniprot:P06709
Length = 321
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 71/207 (34%), Positives = 108/207 (52%)
Query: 61 QTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKFG-QKVQL 119
Q AGRGR GR W+S L S+ W+ + L LVI I ++ L+K G KV++
Sbjct: 112 QQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEVLRKLGADKVRV 171
Query: 120 KWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLPRILSKKINIG--NISEL-L 176
KWPNDL L K GIL++ + + +IG G+N+ + R+ +N G + E +
Sbjct: 172 KWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESVVNQGWITLQEAGI 231
Query: 177 NMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYWNFNHAYTNKTVDILKLNKIQKGIVIG 236
N++ L A+ I L +L+LFE G + ++ W + N+ V ++ +K GI G
Sbjct: 232 NLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGISRG 291
Query: 237 INKNGCLLLNTKFGKITI-SSGDVSLR 262
I+K G LLL G I G++SLR
Sbjct: 292 IDKQGALLLEQD-GIIKPWMGGEISLR 317
>TIGR_CMR|CPS_4745 [details] [associations]
symbol:CPS_4745 "birA bifunctional protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0006768 "biotin metabolic process" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR003142 InterPro:IPR004143 InterPro:IPR004408
Pfam:PF02237 Pfam:PF03099 PANTHER:PTHR12835 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0006464 eggNOG:COG0340 HOGENOM:HOG000041812 KO:K03524
OMA:AVWKHIE ProtClustDB:PRK11886 GO:GO:0004077 InterPro:IPR013196
InterPro:IPR008988 Pfam:PF08279 SUPFAM:SSF50037 TIGRFAMs:TIGR00121
RefSeq:YP_271389.1 ProteinModelPortal:Q47UY3 STRING:Q47UY3
GeneID:3521849 KEGG:cps:CPS_4745 PATRIC:21472307
BioCyc:CPSY167879:GI48-4751-MONOMER Uniprot:Q47UY3
Length = 333
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 69/209 (33%), Positives = 109/209 (52%)
Query: 61 QTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKFGQ-KVQL 119
Q+AGRGR GR W S + S+ W + L L L+ ++A+S A+K +VQL
Sbjct: 124 QSAGRGRRGRQWISPFGSQIYLSMYWYLEQGLSGAMGLSLLTALAVSDAVKAHSNVQVQL 183
Query: 120 KWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLP----RILSKKINIGNISEL 175
KWPND+ L+G K GILID + + +IGIGLNL +P +++ +K
Sbjct: 184 KWPNDIYLDGVKLAGILIDLEGQALEPSHCVIGIGLNLHMPVDAGKLIEQKWTDLQSHSK 243
Query: 176 LNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYWNFNHAYTNKTVDILKLNKIQKGIVI 235
+ ++ L A I L L+ + G ++ W+ + A+ NK V ++ ++ GI
Sbjct: 244 VKIDRNGLSAQLISCLRKRLQQHQQVGLVPMLEEWHAHDAFLNKRVKLITGERVTHGICR 303
Query: 236 GINKNGCLLLNTKFGKIT-ISSGDVSLRL 263
G+N G LLL G++ + G+VSLR+
Sbjct: 304 GVNNQGALLLEVD-GQVKPVYGGEVSLRM 331
>TIGR_CMR|SO_0214 [details] [associations]
symbol:SO_0214 "birA bifunctional protein" species:211586
"Shewanella oneidensis MR-1" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR003142 InterPro:IPR004143 InterPro:IPR004408
Pfam:PF02237 Pfam:PF03099 PANTHER:PTHR12835 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0006464 HOGENOM:HOG000041812 KO:K03524 ProtClustDB:PRK11886
GO:GO:0004077 InterPro:IPR013196 InterPro:IPR008988 Pfam:PF08279
SUPFAM:SSF50037 TIGRFAMs:TIGR00121 HSSP:P06709 RefSeq:NP_715854.1
ProteinModelPortal:Q8EK84 GeneID:1168097 KEGG:son:SO_0214
PATRIC:23520113 OMA:GETGPLW Uniprot:Q8EK84
Length = 319
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 68/206 (33%), Positives = 100/206 (48%)
Query: 61 QTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKFG-QKVQL 119
Q+AGRGR GR W S L FS W F + L LV++ +L LK FG + V +
Sbjct: 112 QSAGRGRRGRTWVSPYGHHLYFSQFWSFPQGMAQAMGLSLVVACSLVEVLKSFGVENVGV 171
Query: 120 KWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLPRILSKKINI--GNISELLN 177
KWPND+ LN K GILI+ + + IIGIG+N+ + K I+ ++S L
Sbjct: 172 KWPNDIYLNFKKLAGILIEMSGQADSECQLIIGIGVNMAMSEGQGKGIDQPWSDLSGLTC 231
Query: 178 MEHEKLLAVFIC-YLIDSLKLFEHYGFSIFMKYWNFNHAYTNKTVDILKLNKIQKGIVIG 236
+ ++ L + + L ++LFE G F W + K + +L GI G
Sbjct: 232 IPNKTDLVIALHKQLKRDIQLFEREGLVAFKTRWQEADLFHGKEIRLLMGENHLDGICRG 291
Query: 237 INKNGCLLLNTKFGKITISSGDVSLR 262
I++ G +LL G G++SLR
Sbjct: 292 IDEQGAVLLENADGIQAYIGGEISLR 317
>TIGR_CMR|CHY_2371 [details] [associations]
symbol:CHY_2371 "BirA bifunctional protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004077 "biotin-[acetyl-CoA-carboxylase] ligase
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006768 "biotin metabolic process"
evidence=ISS] [GO:0009102 "biotin biosynthetic process"
evidence=ISS] InterPro:IPR004143 InterPro:IPR004408 Pfam:PF03099
PANTHER:PTHR12835 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006464 eggNOG:COG0340
KO:K03524 GO:GO:0004077 InterPro:IPR013196 InterPro:IPR008988
Pfam:PF08279 SUPFAM:SSF50037 TIGRFAMs:TIGR00121 RefSeq:YP_361168.1
ProteinModelPortal:Q3A9L6 STRING:Q3A9L6 GeneID:3728172
KEGG:chy:CHY_2371 PATRIC:21277809 HOGENOM:HOG000041811 OMA:ISSTNEW
BioCyc:CHYD246194:GJCN-2370-MONOMER Uniprot:Q3A9L6
Length = 328
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 68/211 (32%), Positives = 109/211 (51%)
Query: 61 QTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKFGQKVQLK 120
QTAGRGR GR W S P L FSL + L L L+ +AL+ AL+ G VQ+K
Sbjct: 113 QTAGRGRLGRSWNSPPGQGLYFSLVLYPSLPPVELPRLTLLAGLALAQALENLGVNVQIK 172
Query: 121 WPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLPRILSKKINIGNISELLNMEH 180
WPNDLL+NG K GIL + E + +A++GIG+N+ P K + + L EH
Sbjct: 173 WPNDLLINGQKVAGILTEIAAEAERTIYAVVGIGINIE-PLDEEVKSSFAYPATALK-EH 230
Query: 181 ------EKLLAVFICYLIDSLKLFEHYGFSIFMKYWNFNHAYTNKTVDILKLNKIQKGIV 234
+ LLA+F+ + F+ F+ + + A+ + V I+ ++ G++
Sbjct: 231 LPGVSRQSLLAMFLERFEKLYEEFKKGEFAQSLTEYKKRLAFLGEEVMIITGDREYIGVL 290
Query: 235 IGINKNGCLLLNTKFGKITISSGDVSLRLKK 265
+ ++G L++N ++G++SLR K+
Sbjct: 291 HDLGEDGSLIINDGNTVKRFAAGEISLRRKE 321
>UNIPROTKB|Q9KV39 [details] [associations]
symbol:VC_0319 "BirA bifunctional protein" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR003142 InterPro:IPR004143 InterPro:IPR004408
Pfam:PF02237 Pfam:PF03099 PANTHER:PTHR12835 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006464 GO:GO:0009102 KO:K03524 OMA:AVWKHIE
ProtClustDB:PRK11886 GO:GO:0004077 InterPro:IPR013196
InterPro:IPR008988 Pfam:PF08279 SUPFAM:SSF50037 TIGRFAMs:TIGR00121
HSSP:P06709 PIR:E82337 RefSeq:NP_229973.1 ProteinModelPortal:Q9KV39
DNASU:2615110 GeneID:2615110 KEGG:vch:VC0319 PATRIC:20079687
Uniprot:Q9KV39
Length = 320
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 64/215 (29%), Positives = 106/215 (49%)
Query: 54 TFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKF 113
T + Q +GRGR GR W S L S+ W+ + L LV+ +A+ AL+
Sbjct: 104 TVCLAEYQASGRGRRGRHWVSPFGANLYLSIYWRLDAGMAAAMGLSLVVGVAIVEALEAM 163
Query: 114 G-QKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLP----RILSKKIN 168
G V+LKWPNDL K GIL++ + +IG+G+NL + I I+
Sbjct: 164 GVDGVKLKWPNDLYYQDKKLAGILVEMSGQAGAAAHLVIGMGINLAMRDNEGNIDQPWIS 223
Query: 169 IGNISELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYWNFNHAYTNKTVDILK-LN 227
+ ++ ++ L I L +L+ +E G F++ WN + + V +L N
Sbjct: 224 LAEVTGQSRIDRNALAINLIAALDRTLRQYEISGMQNFVERWNRWDNFIGRPVKLLMGAN 283
Query: 228 KIQKGIVIGINKNGCLLLNTKFGKITISSGDVSLR 262
++ +GI GI+++G +LL T+ G + G++SLR
Sbjct: 284 EV-RGIERGIDEHGGVLLETEEGLKSFIGGEISLR 317
>TIGR_CMR|VC_0319 [details] [associations]
symbol:VC_0319 "birA bifunctional protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR003142 InterPro:IPR004143 InterPro:IPR004408
Pfam:PF02237 Pfam:PF03099 PANTHER:PTHR12835 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006464 GO:GO:0009102 KO:K03524 OMA:AVWKHIE
ProtClustDB:PRK11886 GO:GO:0004077 InterPro:IPR013196
InterPro:IPR008988 Pfam:PF08279 SUPFAM:SSF50037 TIGRFAMs:TIGR00121
HSSP:P06709 PIR:E82337 RefSeq:NP_229973.1 ProteinModelPortal:Q9KV39
DNASU:2615110 GeneID:2615110 KEGG:vch:VC0319 PATRIC:20079687
Uniprot:Q9KV39
Length = 320
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 64/215 (29%), Positives = 106/215 (49%)
Query: 54 TFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKF 113
T + Q +GRGR GR W S L S+ W+ + L LV+ +A+ AL+
Sbjct: 104 TVCLAEYQASGRGRRGRHWVSPFGANLYLSIYWRLDAGMAAAMGLSLVVGVAIVEALEAM 163
Query: 114 G-QKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLP----RILSKKIN 168
G V+LKWPNDL K GIL++ + +IG+G+NL + I I+
Sbjct: 164 GVDGVKLKWPNDLYYQDKKLAGILVEMSGQAGAAAHLVIGMGINLAMRDNEGNIDQPWIS 223
Query: 169 IGNISELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYWNFNHAYTNKTVDILK-LN 227
+ ++ ++ L I L +L+ +E G F++ WN + + V +L N
Sbjct: 224 LAEVTGQSRIDRNALAINLIAALDRTLRQYEISGMQNFVERWNRWDNFIGRPVKLLMGAN 283
Query: 228 KIQKGIVIGINKNGCLLLNTKFGKITISSGDVSLR 262
++ +GI GI+++G +LL T+ G + G++SLR
Sbjct: 284 EV-RGIERGIDEHGGVLLETEEGLKSFIGGEISLR 317
>TIGR_CMR|CBU_1002 [details] [associations]
symbol:CBU_1002 "birA bifunctional protein" species:227377
"Coxiella burnetii RSA 493" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR003142 InterPro:IPR004143 InterPro:IPR004408
Pfam:PF02237 Pfam:PF03099 PANTHER:PTHR12835 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0006464 HOGENOM:HOG000041812 KO:K03524 OMA:AVWKHIE
GO:GO:0004077 InterPro:IPR013196 Pfam:PF08279 TIGRFAMs:TIGR00121
HSSP:P06709 RefSeq:NP_820009.1 ProteinModelPortal:Q83CV0
GeneID:1208898 KEGG:cbu:CBU_1002 PATRIC:17930723
ProtClustDB:CLSK914471 BioCyc:CBUR227377:GJ7S-993-MONOMER
Uniprot:Q83CV0
Length = 323
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 69/223 (30%), Positives = 111/223 (49%)
Query: 52 HPTFL---ATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSI 108
HP L ++QT G+GR R W+S + SL + F + L L LV +A+
Sbjct: 102 HPQQLNICLAEMQTQGKGRFQRAWHSPFGQNIYLSLKYPFHKDVSELAGLSLVCGLAVCN 161
Query: 109 ALKK---FGQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNW--AIIGIGLNLGLPRIL 163
A+++ + + +KWPND++ K GILI+ IE + + + AIIGIGLN+ + +
Sbjct: 162 AIEENCPLTKPIFVKWPNDIICEDKKLAGILIE--IEAETHGFCSAIIGIGLNVNMEKEQ 219
Query: 164 SKK----INIGNISELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYWNFNHAYTNK 219
K I+I N++ + + +L A I L++ + FE GF+ F+ W NK
Sbjct: 220 DKINQPWISIKNLTAT-DQDRNQLCAALINQLVNCIDCFEKKGFNEFLASWKTKDYLLNK 278
Query: 220 TVDILKLNKIQKGIVIGINKNGCLLLNTKFGKITI-SSGDVSL 261
+ + + +G +GIN G L + G I SSGD +L
Sbjct: 279 QIQLKSGRQELQGKSLGINPQGYLTVQLSDGSERIFSSGDTTL 321
>TIGR_CMR|DET_0849 [details] [associations]
symbol:DET_0849 "biotin--acetyl-CoA-carboxylase ligase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR003142 InterPro:IPR004143 InterPro:IPR004408
Pfam:PF02237 Pfam:PF03099 PANTHER:PTHR12835 GO:GO:0006464
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0340 KO:K03524
GO:GO:0004077 InterPro:IPR008988 SUPFAM:SSF50037 TIGRFAMs:TIGR00121
HOGENOM:HOG000041811 RefSeq:YP_181576.1 ProteinModelPortal:Q3Z873
STRING:Q3Z873 GeneID:3229855 KEGG:det:DET0849 PATRIC:21608757
OMA:ANPETIM ProtClustDB:CLSK837253
BioCyc:DETH243164:GJNF-850-MONOMER Uniprot:Q3Z873
Length = 266
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 67/217 (30%), Positives = 109/217 (50%)
Query: 54 TFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKF 113
T + T QT G GR R+W S P+ + SL + + L+ L + S+A+S A++
Sbjct: 53 TLVITGKQTEGHGRLKRLWVS-PQGNIYMSLI--LRPNQNQLSRLIMAASLAVSFAIENT 109
Query: 114 -GQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLPRILSKKINIGNI 172
G +LKWPND+L++G K CG+L++ I N++ +G+G+N+ ++ G
Sbjct: 110 TGLIGELKWPNDILIDGKKVCGMLVENDIRDGQVNFSTVGLGINVNTDMQSYPELK-GIA 168
Query: 173 SELLN-----MEHEKLLAVFICYLIDSLKL-FEHYGFSIFMKYWNFNHAYTNKTVDILKL 226
+ L+N + EKL+ F+ + + L L YG IF + W K VD+
Sbjct: 169 TSLINHTGKPVSCEKLIVSFL-HEFERLYLGLNEYGECIF-EMWRKRLITLGKEVDVTSG 226
Query: 227 NKIQKGIVIGINKNGCLLLNTKFGKIT-ISSGDVSLR 262
+GIV + +G L + G + I +GDVSLR
Sbjct: 227 KDTYRGIVESVVPDGSLKIRLADGNLVHIVAGDVSLR 263
>UNIPROTKB|Q81ST5 [details] [associations]
symbol:birA "BirA bifunctional protein" species:1392
"Bacillus anthracis" [GO:0009102 "biotin biosynthetic process"
evidence=ISS] InterPro:IPR003142 InterPro:IPR004143
InterPro:IPR004408 Pfam:PF02237 Pfam:PF03099 PANTHER:PTHR12835
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006464 GO:GO:0009102
KO:K03524 OMA:AVWKHIE GO:GO:0004077 InterPro:IPR013196
InterPro:IPR008988 Pfam:PF08279 SUPFAM:SSF50037 TIGRFAMs:TIGR00121
HSSP:P06709 HOGENOM:HOG000041811 RefSeq:NP_844010.1
RefSeq:YP_018183.1 RefSeq:YP_027716.1 ProteinModelPortal:Q81ST5
DNASU:1085727 EnsemblBacteria:EBBACT00000009346
EnsemblBacteria:EBBACT00000016371 EnsemblBacteria:EBBACT00000022783
GeneID:1085727 GeneID:2815446 GeneID:2849812 KEGG:ban:BA_1560
KEGG:bar:GBAA_1560 KEGG:bat:BAS1447 ProtClustDB:CLSK916280
BioCyc:BANT260799:GJAJ-1521-MONOMER
BioCyc:BANT261594:GJ7F-1584-MONOMER Uniprot:Q81ST5
Length = 326
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 64/217 (29%), Positives = 108/217 (49%)
Query: 54 TFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKF 113
T + + QTAGRGR R W+S + S+ + I + + L L+ +++++ A++K
Sbjct: 111 TIVVAEEQTAGRGRLSRKWHSPKGTGIWMSIILRPSIPVHHAPQLTLLAAVSVAQAIEKC 170
Query: 114 -GQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLPRILSKKINIGNI 172
G V +KWPND+L+ G K GIL + + N I+GIG+N + + I +I
Sbjct: 171 TGVNVGIKWPNDILIQGKKAVGILTEMQADPDKINAVIMGIGINANQKQEHFDE-EIQHI 229
Query: 173 SELLNMEHEKLL--AVFICYLIDSL-KLFEHY---GFSIFMKYWNFNHAYTNKTVDILKL 226
+ L +E K + A + + L KL+E Y GFS+ W K ++ +
Sbjct: 230 ATSLAIESGKPIVRAELMQQIFLQLEKLYEEYLQNGFSVIKILWESYAVSIGKEINARTM 289
Query: 227 NKIQKGIVIGINKNGCLLLNTKFGKIT-ISSGDVSLR 262
+ G+ GI ++G LLL GK+ I S D+ ++
Sbjct: 290 RETITGVAKGITEDGVLLLEDHEGKVHHIHSADIEIK 326
>TIGR_CMR|BA_1560 [details] [associations]
symbol:BA_1560 "birA bifunctional protein" species:198094
"Bacillus anthracis str. Ames" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR003142 InterPro:IPR004143 InterPro:IPR004408
Pfam:PF02237 Pfam:PF03099 PANTHER:PTHR12835 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006464 GO:GO:0009102
KO:K03524 OMA:AVWKHIE GO:GO:0004077 InterPro:IPR013196
InterPro:IPR008988 Pfam:PF08279 SUPFAM:SSF50037 TIGRFAMs:TIGR00121
HSSP:P06709 HOGENOM:HOG000041811 RefSeq:NP_844010.1
RefSeq:YP_018183.1 RefSeq:YP_027716.1 ProteinModelPortal:Q81ST5
DNASU:1085727 EnsemblBacteria:EBBACT00000009346
EnsemblBacteria:EBBACT00000016371 EnsemblBacteria:EBBACT00000022783
GeneID:1085727 GeneID:2815446 GeneID:2849812 KEGG:ban:BA_1560
KEGG:bar:GBAA_1560 KEGG:bat:BAS1447 ProtClustDB:CLSK916280
BioCyc:BANT260799:GJAJ-1521-MONOMER
BioCyc:BANT261594:GJ7F-1584-MONOMER Uniprot:Q81ST5
Length = 326
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 64/217 (29%), Positives = 108/217 (49%)
Query: 54 TFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKF 113
T + + QTAGRGR R W+S + S+ + I + + L L+ +++++ A++K
Sbjct: 111 TIVVAEEQTAGRGRLSRKWHSPKGTGIWMSIILRPSIPVHHAPQLTLLAAVSVAQAIEKC 170
Query: 114 -GQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLPRILSKKINIGNI 172
G V +KWPND+L+ G K GIL + + N I+GIG+N + + I +I
Sbjct: 171 TGVNVGIKWPNDILIQGKKAVGILTEMQADPDKINAVIMGIGINANQKQEHFDE-EIQHI 229
Query: 173 SELLNMEHEKLL--AVFICYLIDSL-KLFEHY---GFSIFMKYWNFNHAYTNKTVDILKL 226
+ L +E K + A + + L KL+E Y GFS+ W K ++ +
Sbjct: 230 ATSLAIESGKPIVRAELMQQIFLQLEKLYEEYLQNGFSVIKILWESYAVSIGKEINARTM 289
Query: 227 NKIQKGIVIGINKNGCLLLNTKFGKIT-ISSGDVSLR 262
+ G+ GI ++G LLL GK+ I S D+ ++
Sbjct: 290 RETITGVAKGITEDGVLLLEDHEGKVHHIHSADIEIK 326
>TIGR_CMR|GSU_1935 [details] [associations]
symbol:GSU_1935 "birA biofunctional protein, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS] [GO:0018054
"peptidyl-lysine biotinylation" evidence=ISS] [GO:0018271
"biotin-protein ligase activity" evidence=ISS] InterPro:IPR003142
InterPro:IPR004143 InterPro:IPR004408 Pfam:PF02237 Pfam:PF03099
PANTHER:PTHR12835 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0006464 KO:K03524
GO:GO:0004077 InterPro:IPR013196 InterPro:IPR008988 Pfam:PF08279
SUPFAM:SSF50037 TIGRFAMs:TIGR00121 HOGENOM:HOG000041811
RefSeq:NP_952984.2 GeneID:2685431 KEGG:gsu:GSU1935 PATRIC:22026735
ProtClustDB:CLSK828656 BioCyc:GSUL243231:GH27-1855-MONOMER
Uniprot:Q74BU1
Length = 338
Score = 217 (81.4 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 65/216 (30%), Positives = 111/216 (51%)
Query: 54 TFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKF 113
T + QT G+GR GR W S P + + S+ + IS + L L+ ++A + A+++
Sbjct: 122 TVVLADAQTGGKGRLGRRWESPPGVNVYCSIILRPPISPLHSPQLTLLSAVATAEAIERT 181
Query: 114 GQKVQ-LKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLPRILSKKINIGNI 172
V +KWPND+L+NG K G+L + E + + ++GIG+N+ + R ++
Sbjct: 182 SGLVPAIKWPNDILVNGFKVAGMLNELSAETERVEYLVLGIGVNINMERDQFPG-DLRYP 240
Query: 173 SELLNMEHEKLLA--VFICYLIDSL-KLFEHY---GFSIFMKYWNFNHAYTNKTVDILKL 226
+ L +E + + F+ L++SL +L++ Y GFS W A + V +
Sbjct: 241 ASSLALEAGRTVERIPFVRALLESLDRLYDEYLLKGFSPVRDAWLARSAVMGRRVKVDGG 300
Query: 227 NKIQKGIVIGINKNGCLLLNTKFGKIT-ISSGDVSL 261
I G V GI++ G LL+ T G + + +GDVSL
Sbjct: 301 AGILAGTVEGIDEIGALLVRTAGGSLERVLAGDVSL 336
>TIGR_CMR|ECH_0848 [details] [associations]
symbol:ECH_0848 "biotin--acetyl-CoA-carboxylase ligase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR004143 InterPro:IPR004408 Pfam:PF03099
PANTHER:PTHR12835 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0006464 eggNOG:COG0340 KO:K03524 GO:GO:0004077
TIGRFAMs:TIGR00121 HOGENOM:HOG000041813 RefSeq:YP_507644.1
ProteinModelPortal:Q2GFY9 STRING:Q2GFY9 GeneID:3928076
KEGG:ech:ECH_0848 PATRIC:20577110 OMA:TYHPDNI
ProtClustDB:CLSK749354 BioCyc:ECHA205920:GJNR-851-MONOMER
Uniprot:Q2GFY9
Length = 251
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 60/212 (28%), Positives = 99/212 (46%)
Query: 54 TFLATKIQTAGRGRAGRIWYSEPEITLTFSLA-WKFK--ISLKYLTSLPLVISIA-LSIA 109
T + + Q GRGR R WYS P L FS+ KFK L ++ +L + ++ + I
Sbjct: 41 TIIISDKQIKGRGRYERTWYS-PTGNLYFSIIITKFKETFPLPFIAALSVGKTLEEILIN 99
Query: 110 LKKFGQKVQLKWPNDLLLNGNKFCGILIDT-CIEKKNNNWAIIGIGLNLGLPRILSKKIN 168
KV+ KWPND+L+N K GIL+++ + W ++GIG+N+ + I
Sbjct: 100 NNNTTSKVEYKWPNDILVNSKKISGILLESKTLNNTLQKWIVVGIGINMYKAPTYATTIK 159
Query: 169 IGNIS-ELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYWNFNHAYTNKTVDILKLN 227
N + L N+E LL I + K + ++GF+ W + N+ + +
Sbjct: 160 EHNQNFTLSNLE---LLEKVINNFYNFRKHYIYHGFADIRNLWLKQTCHLNREITVKSYK 216
Query: 228 KIQKGIVIGINKNGCLLLNTKFGKITISSGDV 259
G I I+ G +L+ I I+SG++
Sbjct: 217 HTYTGQFITIDTQGNMLMKQNDKTICITSGEI 248
>TIGR_CMR|SPO_2762 [details] [associations]
symbol:SPO_2762 "biotin--acetyl-CoA-carboxylase ligase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR003142 InterPro:IPR004143 InterPro:IPR004408
Pfam:PF02237 Pfam:PF03099 PANTHER:PTHR12835 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006464 KO:K03524 GO:GO:0004077
TIGRFAMs:TIGR00121 HOGENOM:HOG000041813 RefSeq:YP_167969.1
ProteinModelPortal:Q5LPT7 GeneID:3193847 KEGG:sil:SPO2762
PATRIC:23378943 OMA:SECLARA ProtClustDB:CLSK933966 Uniprot:Q5LPT7
Length = 249
Score = 173 (66.0 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 58/216 (26%), Positives = 93/216 (43%)
Query: 53 PTFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIAL---SIA 109
P ++ + QTA RGR GR W ++ + L +L + K V ++AL +A
Sbjct: 33 PEWIMARRQTAARGRRGRAW-TQAQGNLAATLVMRPVGEAKQAALRSFVAALALFDACVA 91
Query: 110 LKKFGQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNL----GLPRILSK 165
+ + + LKWPND+LLNG K GIL+++ IGIG+NL G +
Sbjct: 92 VTGRAEGLALKWPNDVLLNGGKLAGILLESTGHGSGVAHLAIGIGVNLADAPGADAVEPG 151
Query: 166 KIN-IGNISEL-LNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYWNFNHAYTNKTVDI 223
+ + +SE +E E L F YGF+ W A + +
Sbjct: 152 AVRPVSLVSETGAQVEPELFLTELAAAFARYETQFLTYGFAPIRSAWLARAARLGEVITA 211
Query: 224 LKLNKIQKGIVIGINKNGCLLLNTKFGKITISSGDV 259
G ++ G L+LNT G+++I + +V
Sbjct: 212 RTATSQTVGTFETVDAEGNLVLNTAQGRVSIPAAEV 247
>TIGR_CMR|APH_0876 [details] [associations]
symbol:APH_0876 "biotin--acetyl-CoA-carboxylase ligase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR004143 InterPro:IPR004408 Pfam:PF03099
PANTHER:PTHR12835 GO:GO:0006464 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0340 KO:K03524 GO:GO:0004077
TIGRFAMs:TIGR00121 HOGENOM:HOG000041813 ProtClustDB:CLSK749354
RefSeq:YP_505452.1 ProteinModelPortal:Q2GJJ9 STRING:Q2GJJ9
GeneID:3931089 KEGG:aph:APH_0876 PATRIC:20950450 OMA:MNEQISV
BioCyc:APHA212042:GHPM-889-MONOMER Uniprot:Q2GJJ9
Length = 241
Score = 160 (61.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 58/212 (27%), Positives = 101/212 (47%)
Query: 54 TFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKF 113
T + Q++G GR GR WYS P+ L FS+ K + + L S +S+ +S+ + F
Sbjct: 31 TVIVADEQSSGVGRRGRQWYS-PKGNLYFSIVLKEHLHVPTL-SFACALSVGISLE-QIF 87
Query: 114 GQKVQ--------LKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLN-LGLPRILS 164
Q ++ KWPND+ ++ K G+L+ + ++ + W + G+G+N L P +
Sbjct: 88 SQHIENSKIPTLKYKWPNDVFVDNKKISGVLLQSKVQGHSIPWIVCGVGVNILHHPEYAT 147
Query: 165 KKINIGNISELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYW-NFNHAYTNKTVDI 223
+I + L + + +LL V + L L ++ GF+ W HA N V I
Sbjct: 148 ---SISSYIPDLKLTNIELLDVVLENLAKLLDIYSASGFAPLRSLWLKKAHAL-NSHVCI 203
Query: 224 LKLNKI-QKGIVIGINKNGCLLLNTKFGKITI 254
+ I +G I +G ++L K G+ T+
Sbjct: 204 TTSDGITHEGTFTDIGLDGSIVL--KSGEDTL 233
>TAIR|locus:2050291 [details] [associations]
symbol:HCS1 "holocarboxylase synthase 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0004077 "biotin-[acetyl-CoA-carboxylase]
ligase activity" evidence=IEA;IDA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006464 "cellular protein modification
process" evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] [GO:0015979 "photosynthesis" evidence=RCA]
[GO:0045333 "cellular respiration" evidence=RCA] [GO:0004078
"biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity"
evidence=IDA] [GO:0042966 "biotin carboxyl carrier protein
biosynthetic process" evidence=IDA] InterPro:IPR003142
InterPro:IPR004143 InterPro:IPR004408 Pfam:PF02237 Pfam:PF03099
PANTHER:PTHR12835 GO:GO:0005829 GO:GO:0009507 EMBL:CP002685
GO:GO:0006464 EMBL:AC006053 GO:GO:0004077 TIGRFAMs:TIGR00121
GO:GO:0004078 GO:GO:0004080 OMA:FLIWSPR EMBL:U41369 EMBL:BT024748
IPI:IPI00517667 PIR:G84651 RefSeq:NP_565605.1 RefSeq:NP_850067.1
UniGene:At.19972 HSSP:P06709 ProteinModelPortal:Q9SL92 SMR:Q9SL92
STRING:Q9SL92 PRIDE:Q9SL92 EnsemblPlants:AT2G25710.1
EnsemblPlants:AT2G25710.2 GeneID:817112 KEGG:ath:AT2G25710
TAIR:At2g25710 InParanoid:Q9SL92 PhylomeDB:Q9SL92
ProtClustDB:CLSN2688420 BioCyc:MetaCyc:AT2G25710-MONOMER
ArrayExpress:Q9SL92 Genevestigator:Q9SL92 GO:GO:0042966
Uniprot:Q9SL92
Length = 367
Score = 162 (62.1 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 58/200 (29%), Positives = 93/200 (46%)
Query: 58 TKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKFGQK- 116
T IQ GRGR +W S P+ L +S + + + + + V+S+A++ A+K K
Sbjct: 142 TDIQFKGRGRTKNVWES-PKGCLMYSFTLEMEDG-RVVPLIQYVVSLAVTEAVKDVCDKK 199
Query: 117 ------VQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNL--GLPRILSKKIN 168
V++KWPNDL +NG K GIL + K N ++ G+GLN+ G P +
Sbjct: 200 GLPYIDVKIKWPNDLYVNGLKVGGILCTSTYRSKKFNVSV-GVGLNVDNGQPTTCLNAVL 258
Query: 169 IGNISELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIF--MKYWNFNHAYTNKTV-DILK 225
G E ++ E++L F LF GF + Y + H+ V D ++
Sbjct: 259 KGMAPESNLLKREEILGAFFHKFEKFFDLFMDQGFKSLEELYYRTWLHSEQRVIVEDKVE 318
Query: 226 LNKIQKGIVI-GINKNGCLL 244
+Q + I G+ +G LL
Sbjct: 319 DQVVQNVVTIQGLTSSGYLL 338
>TIGR_CMR|NSE_0693 [details] [associations]
symbol:NSE_0693 "biotin--acetyl-CoA-carboxylase ligase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR004143 InterPro:IPR004408 Pfam:PF03099
PANTHER:PTHR12835 GO:GO:0006464 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0340 KO:K03524 GO:GO:0004077
TIGRFAMs:TIGR00121 RefSeq:YP_506570.1 ProteinModelPortal:Q2GD76
STRING:Q2GD76 GeneID:3931744 KEGG:nse:NSE_0693 PATRIC:22681405
HOGENOM:HOG000127217 OMA:SLREHES ProtClustDB:CLSK2527760
BioCyc:NSEN222891:GHFU-706-MONOMER Uniprot:Q2GD76
Length = 226
Score = 137 (53.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/188 (25%), Positives = 84/188 (44%)
Query: 64 GRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKFGQKVQLKWPN 123
G+ R G+ + E L S+ F +K + L + +A+ L + + +Q KWPN
Sbjct: 41 GKTRNGKRDWKIVEGNLFMSIGL-FNEDVK-TGEIVLKVVVAVGELLSNWIKDIQYKWPN 98
Query: 124 DLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGLPRILSKKINIGNISELLNMEHEKL 183
D+L+NG K CGIL++ N+ +IGIG+N +L + L+ H+
Sbjct: 99 DILVNGKKICGILLEY-----NSGKLVIGIGMN-----VLHSPYEW---TTCLDKYHQIS 145
Query: 184 LAVFICYLIDSLKLFEHYGFSIFMKYWNFNHAYTNKTVDILKLNKIQKGIVIGINKNGCL 243
L ++ SL+ E +K K +D K+++G+ I + +G L
Sbjct: 146 LDELSLQILASLREHESKPIEQIIKILRSKAFLLGKEIDFNTNGKLERGLFIDVAPDGAL 205
Query: 244 LLNTKFGK 251
+L + K
Sbjct: 206 VLEDLYTK 213
>TAIR|locus:2029642 [details] [associations]
symbol:HCS2 "holocarboxylase synthetase 2" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0004077 "biotin-[acetyl-CoA-carboxylase]
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006464 "cellular protein modification process"
evidence=IEA;ISS] [GO:0018271 "biotin-protein ligase activity"
evidence=IMP] [GO:0015979 "photosynthesis" evidence=RCA]
[GO:0045333 "cellular respiration" evidence=RCA] InterPro:IPR003142
InterPro:IPR004143 InterPro:IPR004408 Pfam:PF02237 Pfam:PF03099
PANTHER:PTHR12835 EMBL:CP002684 GO:GO:0003824 GO:GO:0006464
TIGRFAMs:TIGR00121 OMA:TWLHSGQ IPI:IPI00542710 RefSeq:NP_850957.1
UniGene:At.39275 ProteinModelPortal:F4I4W2
EnsemblPlants:AT1G37150.2 GeneID:840632 KEGG:ath:AT1G37150
Uniprot:F4I4W2
Length = 329
Score = 140 (54.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 53/199 (26%), Positives = 92/199 (46%)
Query: 60 IQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKFGQK--- 116
IQ GRGR +W S P+ L +S + + + + + V+S+A++ A+K K
Sbjct: 106 IQLKGRGRTKNVWES-PKGCLMYSFTLEMEDG-RVVPLIQYVVSLAVTEAVKDVCDKKGL 163
Query: 117 ----VQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLG--LPRILSKKINIG 170
V++KWPNDL LNG K GIL T + +G+GLN+ P + +
Sbjct: 164 SYNDVKIKWPNDLYLNGLKIGGILC-TSTYRSRKFLVSVGVGLNVDNEQPTTCLNAV-LK 221
Query: 171 NISELLNM-EHEKLLAVFICYLIDSLKLFEHYGFSIFMKYWNFNHAYTNKTVDILKLNK- 228
++ N+ + E++L F + LF GF + + ++ + V + N+
Sbjct: 222 DVCPPSNLLKREEILGAFFKKFENFFDLFMEQGFKSLEELYYRTWLHSGQRVIAEEKNED 281
Query: 229 --IQKGIVI-GINKNGCLL 244
+Q + I G+ +G LL
Sbjct: 282 QVVQNVVTIQGLTSSGYLL 300
>FB|FBgn0037332 [details] [associations]
symbol:Hcs "Holocarboxylase synthetase" species:7227
"Drosophila melanogaster" [GO:0004080
"biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase
activity" evidence=ISS] [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=IEA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0018054
"peptidyl-lysine biotinylation" evidence=IMP] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0071110 "histone biotinylation"
evidence=IMP] InterPro:IPR003142 InterPro:IPR004143
InterPro:IPR004408 Pfam:PF02237 Pfam:PF03099 PANTHER:PTHR12835
EMBL:AE014297 GO:GO:0009408 GO:GO:0005700 eggNOG:COG0340
GO:GO:0004077 TIGRFAMs:TIGR00121 KO:K01942 GO:GO:0004080
GO:GO:0071110 GeneTree:ENSGT00390000002960 EMBL:AY118365
RefSeq:NP_649542.1 UniGene:Dm.31229 SMR:Q9VNC3 STRING:Q9VNC3
EnsemblMetazoa:FBtr0078683 GeneID:40659 KEGG:dme:Dmel_CG14670
UCSC:CG14670-RA CTD:40659 FlyBase:FBgn0037332 InParanoid:Q9VNC3
OMA:KMMHHIF OrthoDB:EOG4B2RC1 GenomeRNAi:40659 NextBio:819889
GO:GO:0018054 Uniprot:Q9VNC3
Length = 1041
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 59/228 (25%), Positives = 109/228 (47%)
Query: 50 LFHPTFLATKIQTAGRGRAGRIWYSEPEITLTFSLAWKFKISLKYLTSLPLV---ISIAL 106
L H + QT+G GR W S P + FSL + + LPL+ + A+
Sbjct: 803 LIHGLAVLPVQQTSGVGRRNNQWLSPPGCAM-FSLQLHLTMDSALSSRLPLLQHLVGTAI 861
Query: 107 SIALK---KFGQ-KVQLKWPNDLLLNGN-KFCGILIDTCIEKKNNNWAIIGIG----LNL 157
+L+ ++G + +KWPND+ NGN K G++I+T ++ + AI+ IG LN
Sbjct: 862 VNSLRSHEEYGVLDISIKWPNDIYANGNQKIGGLVINTTLQ---GSQAIVNIGSGINLNN 918
Query: 158 GLPRI----LSKKIN--IGNISELLNMEHEKLLAVFICYLIDSLKLFEHYGFSIFMKYWN 211
P + L ++ N + N ++L +++E L+A+ + L ++ F F +
Sbjct: 919 SRPTVCINDLIREYNTRVPN-NKLPILKYELLIAMIFNEIERLLGEVQNGDFDSFYALYY 977
Query: 212 FNHAYTNKTVDI-LKLNKIQKGIVIGINKNGCLLLNTKFGKITISSGD 258
++ ++V I L+ ++ ++ ++GI+ G L + G I I D
Sbjct: 978 SLWLHSGQSVKICLQKDQEKEAEIVGIDDFGFLEVKLPTGTIEIVQPD 1025
>TIGR_CMR|CJE_0094 [details] [associations]
symbol:CJE_0094 "biotin--acetyl-CoA-carboxylase ligase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004077
"biotin-[acetyl-CoA-carboxylase] ligase activity" evidence=ISS]
[GO:0009102 "biotin biosynthetic process" evidence=ISS]
InterPro:IPR004143 InterPro:IPR004408 Pfam:PF03099
PANTHER:PTHR12835 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0006464 eggNOG:COG0340 KO:K03524 GO:GO:0004077
TIGRFAMs:TIGR00121 RefSeq:YP_178118.1 ProteinModelPortal:Q5HX67
STRING:Q5HX67 GeneID:3230857 KEGG:cjr:CJE0094 PATRIC:20041895
HOGENOM:HOG000104218 OMA:SRGNIWE ProtClustDB:PRK08477
BioCyc:CJEJ195099:GJC0-98-MONOMER Uniprot:Q5HX67
Length = 217
Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 46/157 (29%), Positives = 76/157 (48%)
Query: 61 QTAGRGRAGRIWYSEP-EITLTFSLAWKFKISLKYLTSLPLVISIALSIALKKFGQKVQL 119
QT G G W S + L+F + + L S+ + + L L++ G K+ L
Sbjct: 42 QTNGVGSRENSWQSSKGNLHLSFCIKEEDLPKDLPLASVSIYFAYLLKEVLQEKGSKIWL 101
Query: 120 KWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNLGL-PR---ILSKKINIGN-ISE 174
KWPNDL L+ K G+ I K +N+ I G+GLNL P+ + +I++ + +SE
Sbjct: 102 KWPNDLYLDDKKAGGV-----ISAKISNFIIGGMGLNLKFSPQNTALCDIEISLKDLVSE 156
Query: 175 LLNMEHEKLL--AVFICYLID---SLKLFEHYGFSIF 206
L +K+L +F Y+++ S K H+ +F
Sbjct: 157 FLQKVEKKILWKNIFSKYMLEFEKSRKFSVHHEGKVF 193
>UNIPROTKB|P96884 [details] [associations]
symbol:birA "BirA bifunctional protein" species:1773
"Mycobacterium tuberculosis" [GO:0006768 "biotin metabolic process"
evidence=IDA] [GO:0009305 "protein biotinylation" evidence=IDA]
[GO:0018271 "biotin-protein ligase activity" evidence=IDA]
InterPro:IPR003142 InterPro:IPR004143 InterPro:IPR004408
Pfam:PF02237 Pfam:PF03099 PANTHER:PTHR12835 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842582
KO:K03524 GO:GO:0004077 TIGRFAMs:TIGR00121 GO:GO:0018271
GO:GO:0009305 GO:GO:0006768 EMBL:AL123456 PIR:H70979
RefSeq:NP_217796.1 RefSeq:NP_337907.1 RefSeq:YP_006516756.1
PDB:2CGH PDB:3L1A PDB:3L2Z PDB:3RUX PDBsum:2CGH PDBsum:3L1A
PDBsum:3L2Z PDBsum:3RUX SMR:P96884
EnsemblBacteria:EBMYCT00000000322 EnsemblBacteria:EBMYCT00000071231
GeneID:13318102 GeneID:888726 GeneID:922463 KEGG:mtc:MT3379
KEGG:mtu:Rv3279c KEGG:mtv:RVBD_3279c PATRIC:18129182
TubercuList:Rv3279c HOGENOM:HOG000041813 OMA:YAAGCAT
ProtClustDB:CLSK792401 EvolutionaryTrace:P96884 Uniprot:P96884
Length = 266
Score = 114 (45.2 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 36/112 (32%), Positives = 53/112 (47%)
Query: 56 LATKIQTAGRGRAGRIWYSEPEITLTFSL----------AWKFKISLKYLTSLPLVISIA 105
L + QTAGRGR GR W + + S+ AW + L L ++ S+A
Sbjct: 58 LIAEHQTAGRGRHGRGWAATARAQIILSVGVRVVDVPVQAWGW---LSLAAGLAVLDSVA 114
Query: 106 LSIALKKFGQKVQLKWPNDLLLNGNKFCGILIDTCIEKKNNNWAIIGIGLNL 157
IA+ + LKWPND+L G K GIL + + ++G+GLN+
Sbjct: 115 PLIAVPP--AETGLKWPNDVLARGGKLAGILAEVA-----QPFVVLGVGLNV 159
Score = 40 (19.1 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 232 GIVIGINKNGCLLLNTKFGKITISSGDV 259
GI I+ G L L+ + +S+GDV
Sbjct: 235 GIARDIDDQGRLCLDVGGRTVVVSAGDV 262
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.141 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 265 247 0.00078 114 3 11 22 0.40 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 616 (65 KB)
Total size of DFA: 199 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.56u 0.10s 19.66t Elapsed: 00:00:01
Total cpu time: 19.57u 0.10s 19.67t Elapsed: 00:00:01
Start: Thu Aug 15 15:50:32 2013 End: Thu Aug 15 15:50:33 2013