BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15216
(2602 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1P3W|B Chain B, X-Ray Crystal Structure Of E. Coli Iscs
pdb|1P3W|A Chain A, X-Ray Crystal Structure Of E. Coli Iscs
Length = 404
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 245/369 (66%), Positives = 317/369 (85%), Gaps = 3/369 (0%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP 58
+DYSATTP+DPRV +KM+ ++ + FGNPASR+H +GW AE+A++ ARN++A L+ ADP
Sbjct: 7 LDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADP 66
Query: 59 REIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP 118
REI++TSGATES+NLAIKGAA+FY+K+GKHIIT +TEHK+VLD+ R+LE +GF VTYL P
Sbjct: 67 REIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAP 126
Query: 119 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVG 178
+ NG+I L +LE + DTILVS+M VNNEIGV+Q I IGE+CR++G+I+H DA Q+VG
Sbjct: 127 QRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVG 186
Query: 179 KIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238
K+ I++ KVDLMSFS HKIYGPKGIGALY+RR PR RIEAQ+HGGGHE G+RSGTL
Sbjct: 187 KLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPV 246
Query: 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF 298
HQIVGMGEA+R+A+ EM E++R+ L+ RL+NG+ + IEE+Y+NGD+ + P+ LN+SF
Sbjct: 247 HQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGI-KDIEEVYLNGDLEHGAPNILNVSF 305
Query: 299 NFIEGESLLMAIKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 358
N++EGESL+MA+KD+AVSSGSACTSASLEPSYVLRALG NDELAHSSIRF++GRFTTE+E
Sbjct: 306 NYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEE 365
Query: 359 IDFTIKLLK 367
ID+TI+L++
Sbjct: 366 IDYTIELVR 374
Score = 530 bits (1365), Expect = e-150, Method: Compositional matrix adjust.
Identities = 242/365 (66%), Positives = 313/365 (85%), Gaps = 3/365 (0%)
Query: 1401 ATTPIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREII 1458
ATTP+DPRV +KM+ ++ + FGNPASR+H +GW AE+A++ ARN++A L+ ADPREI+
Sbjct: 11 ATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIV 70
Query: 1459 WTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNG 1518
+TSGATES+NLAIKGAA+FY+K+GKHIIT +TEHK+VLD+ R+LE +GF VTYL P+ NG
Sbjct: 71 FTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNG 130
Query: 1519 LITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDI 1578
+I L +LE + DTILVS+M VNNEIGV+Q I IGE+CR++G+I+H DA Q+VGK+ I
Sbjct: 131 IIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPI 190
Query: 1579 NIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIV 1638
++ KVDLMSFS HKIYGPKGIGALY+RR PR RIEAQ+HGGGHE G+RSGTL HQIV
Sbjct: 191 DLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIV 250
Query: 1639 GMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE 1698
GMGEA+R+A+ EM E++R+ L+ RL+NG+ + IEE+Y+NGD+ + P+ LN+SFN++E
Sbjct: 251 GMGEAYRIAKEEMATEMERLRGLRNRLWNGI-KDIEEVYLNGDLEHGAPNILNVSFNYVE 309
Query: 1699 GESLLMAIKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFT 1758
GESL+MA+KD+AVSSGSACTSASLEPSYVLRALG NDELAHSSIRF++GRFTTE+EID+T
Sbjct: 310 GESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYT 369
Query: 1759 IKLLK 1763
I+L++
Sbjct: 370 IELVR 374
>pdb|3LVJ|A Chain A, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 1)
pdb|3LVJ|B Chain B, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 1)
pdb|3LVK|A Chain A, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 2)
pdb|3LVL|B Chain B, Crystal Structure Of E.Coli Iscs-Iscu Complex
pdb|3LVM|A Chain A, Crystal Structure Of E.Coli Iscs
pdb|3LVM|B Chain B, Crystal Structure Of E.Coli Iscs
Length = 423
Score = 537 bits (1384), Expect = e-152, Method: Compositional matrix adjust.
Identities = 245/369 (66%), Positives = 317/369 (85%), Gaps = 3/369 (0%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP 58
+DYSATTP+DPRV +KM+ ++ + FGNPASR+H +GW AE+A++ ARN++A L+ ADP
Sbjct: 26 LDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADP 85
Query: 59 REIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP 118
REI++TSGATES+NLAIKGAA+FY+K+GKHIIT +TEHK+VLD+ R+LE +GF VTYL P
Sbjct: 86 REIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAP 145
Query: 119 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVG 178
+ NG+I L +LE + DTILVS+M VNNEIGV+Q I IGE+CR++G+I+H DA Q+VG
Sbjct: 146 QRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVG 205
Query: 179 KIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238
K+ I++ KVDLMSFS HKIYGPKGIGALY+RR PR RIEAQ+HGGGHE G+RSGTL
Sbjct: 206 KLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPV 265
Query: 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF 298
HQIVGMGEA+R+A+ EM E++R+ L+ RL+NG+ + IEE+Y+NGD+ + P+ LN+SF
Sbjct: 266 HQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGI-KDIEEVYLNGDLEHGAPNILNVSF 324
Query: 299 NFIEGESLLMAIKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 358
N++EGESL+MA+KD+AVSSGSACTSASLEPSYVLRALG NDELAHSSIRF++GRFTTE+E
Sbjct: 325 NYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEE 384
Query: 359 IDFTIKLLK 367
ID+TI+L++
Sbjct: 385 IDYTIELVR 393
Score = 530 bits (1365), Expect = e-150, Method: Compositional matrix adjust.
Identities = 242/365 (66%), Positives = 313/365 (85%), Gaps = 3/365 (0%)
Query: 1401 ATTPIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREII 1458
ATTP+DPRV +KM+ ++ + FGNPASR+H +GW AE+A++ ARN++A L+ ADPREI+
Sbjct: 30 ATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIV 89
Query: 1459 WTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNG 1518
+TSGATES+NLAIKGAA+FY+K+GKHIIT +TEHK+VLD+ R+LE +GF VTYL P+ NG
Sbjct: 90 FTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNG 149
Query: 1519 LITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDI 1578
+I L +LE + DTILVS+M VNNEIGV+Q I IGE+CR++G+I+H DA Q+VGK+ I
Sbjct: 150 IIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPI 209
Query: 1579 NIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIV 1638
++ KVDLMSFS HKIYGPKGIGALY+RR PR RIEAQ+HGGGHE G+RSGTL HQIV
Sbjct: 210 DLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIV 269
Query: 1639 GMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE 1698
GMGEA+R+A+ EM E++R+ L+ RL+NG+ + IEE+Y+NGD+ + P+ LN+SFN++E
Sbjct: 270 GMGEAYRIAKEEMATEMERLRGLRNRLWNGI-KDIEEVYLNGDLEHGAPNILNVSFNYVE 328
Query: 1699 GESLLMAIKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFT 1758
GESL+MA+KD+AVSSGSACTSASLEPSYVLRALG NDELAHSSIRF++GRFTTE+EID+T
Sbjct: 329 GESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYT 388
Query: 1759 IKLLK 1763
I+L++
Sbjct: 389 IELVR 393
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 349 bits (896), Expect = 1e-95, Method: Composition-based stats.
Identities = 214/521 (41%), Positives = 311/521 (59%), Gaps = 40/521 (7%)
Query: 640 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 699
IGID GTTNS VAI+ P VL++ G PSI+ Y DG+ VG+ AK +P+N
Sbjct: 5 IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 64
Query: 700 TISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTIS-----------GIK-SPIEISA 747
T+ +IKR I R ++ + Q ++ K I+ G K +P +ISA
Sbjct: 65 TLFAIKRLIGRRFQD-------EEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISA 117
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
++ +KK AE+ + + AVITVPAYFND QRQ TK+A ++AGL V R++NEPT+AA+
Sbjct: 118 EVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAAL 177
Query: 808 AYKLDKNIFEGIFAVYDLGGGTFDISILKFKN----GVFKVLSVGGDSNLGGDDFDYCLF 863
AY LDK AVYDLGGGTFDISI++ F+VL+ GD++LGG+DFD L
Sbjct: 178 AYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237
Query: 864 SWIVKNAFLKK---LSYKDVNILMIKSREIKELL------SYQSSVKLNVKLSDK---KI 911
+++V+ KK + ++ + M + +E E + Q+ V L +D K
Sbjct: 238 NYLVEE--FKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKH 295
Query: 912 VNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSN 971
+NI + + ++ + LVNR+I AL DA L++ DI++VILVGG TRM + + V+
Sbjct: 296 MNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAE 355
Query: 972 FFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLSLGIETIGGLVEKII 1031
FF ++PD+AV GAA+Q L+G+ + LLLDV PLSLGIET+GG++ +I
Sbjct: 356 FFGKEPRKDVNPDEAVAIGAAVQGGVLTGDV---KDVLLLDVTPLSLGIETMGGVMTTLI 412
Query: 1032 FRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARI 1091
+NTTIP +S F+T +DNQ+A+ I V+QGE + + + L F L I P P G +I
Sbjct: 413 AKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQI 472
Query: 1092 KVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIK 1132
+VT+ +DADG+L + A +K SGK++ ITIK +N DEI+
Sbjct: 473 EVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQ 513
Score = 349 bits (896), Expect = 1e-95, Method: Composition-based stats.
Identities = 214/521 (41%), Positives = 311/521 (59%), Gaps = 40/521 (7%)
Query: 2036 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 2095
IGID GTTNS VAI+ P VL++ G PSI+ Y DG+ VG+ AK +P+N
Sbjct: 5 IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 64
Query: 2096 TISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTIS-----------GIK-SPIEISA 2143
T+ +IKR I R ++ + Q ++ K I+ G K +P +ISA
Sbjct: 65 TLFAIKRLIGRRFQD-------EEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISA 117
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
++ +KK AE+ + + AVITVPAYFND QRQ TK+A ++AGL V R++NEPT+AA+
Sbjct: 118 EVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAAL 177
Query: 2204 AYKLDKNIFEGIFAVYDLGGGTFDISILKFKN----GVFKVLSVGGDSNLGGDDFDYCLF 2259
AY LDK AVYDLGGGTFDISI++ F+VL+ GD++LGG+DFD L
Sbjct: 178 AYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237
Query: 2260 SWIVKNAFLKK---LSYKDVNILMIKSREIKELL------SYQSSVKLNVKLSDK---KI 2307
+++V+ KK + ++ + M + +E E + Q+ V L +D K
Sbjct: 238 NYLVEE--FKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKH 295
Query: 2308 VNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSN 2367
+NI + + ++ + LVNR+I AL DA L++ DI++VILVGG TRM + + V+
Sbjct: 296 MNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAE 355
Query: 2368 FFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLSLGIETIGGLVEKII 2427
FF ++PD+AV GAA+Q L+G+ + LLLDV PLSLGIET+GG++ +I
Sbjct: 356 FFGKEPRKDVNPDEAVAIGAAVQGGVLTGDV---KDVLLLDVTPLSLGIETMGGVMTTLI 412
Query: 2428 FRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARI 2487
+NTTIP +S F+T +DNQ+A+ I V+QGE + + + L F L I P P G +I
Sbjct: 413 AKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQI 472
Query: 2488 KVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIK 2528
+VT+ +DADG+L + A +K SGK++ ITIK +N DEI+
Sbjct: 473 EVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQ 513
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 338 bits (868), Expect = 2e-92, Method: Composition-based stats.
Identities = 209/515 (40%), Positives = 299/515 (58%), Gaps = 28/515 (5%)
Query: 640 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 699
IGID GTTNS VAI P VL++ G PSI+ Y DG VG+ AK +P+N
Sbjct: 5 IGIDLGTTNSCVAIXDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQN 64
Query: 700 TISSIKRFIARDL------KNINTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITL 753
T+ +IKR I R ++++ F + G ++ +P +ISA++
Sbjct: 65 TLFAIKRLIGRRFQDEEVQRDVSIXPFKIIAADN-GDAWVEVKGQKXAPPQISAEVLKKX 123
Query: 754 KKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDK 813
KK AE+ + + AVITVPAYFND QRQ TK+A ++AGL V R++NEPT+AA+AY LDK
Sbjct: 124 KKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK 183
Query: 814 NIFEGIFAVYDLGGGTFDISILKFKN----GVFKVLSVGGDSNLGGDDFDYCLFSWIVKN 869
AVYDLGGG FDISI++ F+VL+ GD++LGG+DFD L +++V+
Sbjct: 184 GTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEE 243
Query: 870 AFLKKLSYKDVNILMIKSREIKELL---------SYQSSVKLNVKLSDK---KIVNITID 917
KK D+ + + +KE + Q+ V L +D K NI +
Sbjct: 244 --FKKDQGIDLRNDPLAXQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHXNIKVT 301
Query: 918 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTL 977
+ ++ + LVNR+I AL DA L++ DI++VILVGG TR + + V+ FF
Sbjct: 302 RAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRXPXVQKKVAEFFGKEP 361
Query: 978 LTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLSLGIETIGGLVEKIIFRNTTI 1037
++PD+AV GAA+Q L+G+ + LLLDV PLSLGIET GG+ +I +NTTI
Sbjct: 362 RKDVNPDEAVAIGAAVQGGVLTGDV---KDVLLLDVTPLSLGIETXGGVXTTLIAKNTTI 418
Query: 1038 PCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQV 1097
P +S F+T +DNQ+A+ I V+QGE + + + L F L I P P G +I+VT+ +
Sbjct: 419 PTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGXPQIEVTFDI 478
Query: 1098 DADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIK 1132
DADG+L + A +K SGK++ ITIK +N DEI+
Sbjct: 479 DADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQ 513
Score = 338 bits (868), Expect = 2e-92, Method: Composition-based stats.
Identities = 209/515 (40%), Positives = 299/515 (58%), Gaps = 28/515 (5%)
Query: 2036 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 2095
IGID GTTNS VAI P VL++ G PSI+ Y DG VG+ AK +P+N
Sbjct: 5 IGIDLGTTNSCVAIXDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQN 64
Query: 2096 TISSIKRFIARDL------KNINTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITL 2149
T+ +IKR I R ++++ F + G ++ +P +ISA++
Sbjct: 65 TLFAIKRLIGRRFQDEEVQRDVSIXPFKIIAADN-GDAWVEVKGQKXAPPQISAEVLKKX 123
Query: 2150 KKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDK 2209
KK AE+ + + AVITVPAYFND QRQ TK+A ++AGL V R++NEPT+AA+AY LDK
Sbjct: 124 KKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK 183
Query: 2210 NIFEGIFAVYDLGGGTFDISILKFKN----GVFKVLSVGGDSNLGGDDFDYCLFSWIVKN 2265
AVYDLGGG FDISI++ F+VL+ GD++LGG+DFD L +++V+
Sbjct: 184 GTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEE 243
Query: 2266 AFLKKLSYKDVNILMIKSREIKELL---------SYQSSVKLNVKLSDK---KIVNITID 2313
KK D+ + + +KE + Q+ V L +D K NI +
Sbjct: 244 --FKKDQGIDLRNDPLAXQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHXNIKVT 301
Query: 2314 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTL 2373
+ ++ + LVNR+I AL DA L++ DI++VILVGG TR + + V+ FF
Sbjct: 302 RAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRXPXVQKKVAEFFGKEP 361
Query: 2374 LTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLSLGIETIGGLVEKIIFRNTTI 2433
++PD+AV GAA+Q L+G+ + LLLDV PLSLGIET GG+ +I +NTTI
Sbjct: 362 RKDVNPDEAVAIGAAVQGGVLTGDV---KDVLLLDVTPLSLGIETXGGVXTTLIAKNTTI 418
Query: 2434 PCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQV 2493
P +S F+T +DNQ+A+ I V+QGE + + + L F L I P P G +I+VT+ +
Sbjct: 419 PTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGXPQIEVTFDI 478
Query: 2494 DADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIK 2528
DADG+L + A +K SGK++ ITIK +N DEI+
Sbjct: 479 DADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQ 513
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 330 bits (847), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 204/504 (40%), Positives = 296/504 (58%), Gaps = 37/504 (7%)
Query: 640 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 699
IGID GTTNS VA++ +V+ + G PS+V + +G+ VG+ AK Q I N
Sbjct: 5 IGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAK-RQAITNPN 62
Query: 700 TISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAEN 759
TI SIKR + D K + Y +P EISA I LK AE+
Sbjct: 63 TIISIKRHMGTDYK-VEIEGKQY------------------TPQEISAIILQYLKSYAED 103
Query: 760 AVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGI 819
+ + AVITVPAYFND QRQ TK+A ++AGL V R++NEPT+AA+AY LDK + I
Sbjct: 104 YLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTI 163
Query: 820 FAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKK----L 875
VYDLGGGTFD+SIL+ +GVF+V + GD++LGGDDFD + ++V N F ++ L
Sbjct: 164 L-VYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLV-NQFKQEHGIDL 221
Query: 876 SYKDVNILMIK--SREIKELLSYQSSVKLNVKL-----SDKKIVNITIDMKQFFTITQHL 928
S + + +K + + K+ LS + ++++ + + +T+ +F ++ HL
Sbjct: 222 SKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHL 281
Query: 929 VNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVV 988
V RT+ +AL DA LT DI+ VILVGGSTR+ + E + ++PD+ V
Sbjct: 282 VERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVA 341
Query: 989 FGAAIQANFLSGNRGIDDNFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTF 1048
GAAIQ ++G + +LLDV PLSLGIET+GG+ K+I RNTTIP S S FTT
Sbjct: 342 IGAAIQGGVIAGEV---KDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTA 398
Query: 1049 KDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAY 1108
DNQT + I V+QGE + + + L F+L IPP P G +I+VT+ +DA+G++ + A
Sbjct: 399 ADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAK 458
Query: 1109 EKISGKKKFITIKPFYNMNLDEIK 1132
+ + K++ ITIK ++ +EI+
Sbjct: 459 DLGTNKEQSITIKSSSGLSEEEIQ 482
Score = 330 bits (847), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 204/504 (40%), Positives = 296/504 (58%), Gaps = 37/504 (7%)
Query: 2036 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 2095
IGID GTTNS VA++ +V+ + G PS+V + +G+ VG+ AK Q I N
Sbjct: 5 IGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAK-RQAITNPN 62
Query: 2096 TISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAEN 2155
TI SIKR + D K + Y +P EISA I LK AE+
Sbjct: 63 TIISIKRHMGTDYK-VEIEGKQY------------------TPQEISAIILQYLKSYAED 103
Query: 2156 AVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGI 2215
+ + AVITVPAYFND QRQ TK+A ++AGL V R++NEPT+AA+AY LDK + I
Sbjct: 104 YLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTI 163
Query: 2216 FAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKK----L 2271
VYDLGGGTFD+SIL+ +GVF+V + GD++LGGDDFD + ++V N F ++ L
Sbjct: 164 L-VYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLV-NQFKQEHGIDL 221
Query: 2272 SYKDVNILMIK--SREIKELLSYQSSVKLNVKL-----SDKKIVNITIDMKQFFTITQHL 2324
S + + +K + + K+ LS + ++++ + + +T+ +F ++ HL
Sbjct: 222 SKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHL 281
Query: 2325 VNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVV 2384
V RT+ +AL DA LT DI+ VILVGGSTR+ + E + ++PD+ V
Sbjct: 282 VERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVA 341
Query: 2385 FGAAIQANFLSGNRGIDDNFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTF 2444
GAAIQ ++G + +LLDV PLSLGIET+GG+ K+I RNTTIP S S FTT
Sbjct: 342 IGAAIQGGVIAGEV---KDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTA 398
Query: 2445 KDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAY 2504
DNQT + I V+QGE + + + L F+L IPP P G +I+VT+ +DA+G++ + A
Sbjct: 399 ADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAK 458
Query: 2505 EKISGKKKFITIKPFYNMNLDEIK 2528
+ + K++ ITIK ++ +EI+
Sbjct: 459 DLGTNKEQSITIKSSSGLSEEEIQ 482
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 554
Score = 327 bits (837), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 197/508 (38%), Positives = 294/508 (57%), Gaps = 28/508 (5%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNRGID-DNFLLLDVIPLSLGIETIGGLVEKIIF 1032
L SI+PD+AV +GAA+QA LSG++ + + LLLDV PLSLGIET GG++ +I
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIK 415
Query: 1033 RNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIK 1092
RNTTIP + FTT+ DNQ + I+V +GE + K+ +L FEL IPP P G +I+
Sbjct: 416 RNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIE 475
Query: 1093 VTYQVDADGLLSIFAYEKISGKKKFITI 1120
VT+ +DA+G+L++ A +K +GK+ ITI
Sbjct: 476 VTFDIDANGILNVSAVDKSTGKENKITI 503
Score = 327 bits (837), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 197/508 (38%), Positives = 294/508 (57%), Gaps = 28/508 (5%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNRGID-DNFLLLDVIPLSLGIETIGGLVEKIIF 2428
L SI+PD+AV +GAA+QA LSG++ + + LLLDV PLSLGIET GG++ +I
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIK 415
Query: 2429 RNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIK 2488
RNTTIP + FTT+ DNQ + I+V +GE + K+ +L FEL IPP P G +I+
Sbjct: 416 RNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIE 475
Query: 2489 VTYQVDADGLLSIFAYEKISGKKKFITI 2516
VT+ +DA+G+L++ A +K +GK+ ITI
Sbjct: 476 VTFDIDANGILNVSAVDKSTGKENKITI 503
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT
Length = 554
Score = 325 bits (833), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/508 (38%), Positives = 292/508 (57%), Gaps = 28/508 (5%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNRGID-DNFLLLDVIPLSLGIETIGGLVEKIIF 1032
L SI+PD+AV +GAA+QA LSG++ + + LLLDV PLSLGIET GG++ +I
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIK 415
Query: 1033 RNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIK 1092
RNTTIP + FTT+ DNQ + I+V +GE + K+ +L FEL IPP P G +I+
Sbjct: 416 RNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIE 475
Query: 1093 VTYQVDADGLLSIFAYEKISGKKKFITI 1120
VT+ +DA+G+L++ A +K +GK+ ITI
Sbjct: 476 VTFDIDANGILNVSAVDKSTGKENKITI 503
Score = 325 bits (833), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/508 (38%), Positives = 292/508 (57%), Gaps = 28/508 (5%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNRGID-DNFLLLDVIPLSLGIETIGGLVEKIIF 2428
L SI+PD+AV +GAA+QA LSG++ + + LLLDV PLSLGIET GG++ +I
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIK 415
Query: 2429 RNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIK 2488
RNTTIP + FTT+ DNQ + I+V +GE + K+ +L FEL IPP P G +I+
Sbjct: 416 RNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIE 475
Query: 2489 VTYQVDADGLLSIFAYEKISGKKKFITI 2516
VT+ +DA+G+L++ A +K +GK+ ITI
Sbjct: 476 VTFDIDANGILNVSAVDKSTGKENKITI 503
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
Length = 543
Score = 324 bits (830), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 196/508 (38%), Positives = 293/508 (57%), Gaps = 28/508 (5%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ K+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQAAKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVRAERNVLIFDLGGGTFDVSILTTEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNRGID-DNFLLLDVIPLSLGIETIGGLVEKIIF 1032
L SI+PD+AV +GAA+QA LSG++ + + LLLDV PLSLGIET GG++ +I
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIK 415
Query: 1033 RNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIK 1092
RNTTIP + FTT+ DNQ + I+V +GE + K+ +L FEL IPP P G +I+
Sbjct: 416 RNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIE 475
Query: 1093 VTYQVDADGLLSIFAYEKISGKKKFITI 1120
VT+ +DA+G+L++ A +K +GK+ ITI
Sbjct: 476 VTFDIDANGILNVSAVDKSTGKENKITI 503
Score = 324 bits (830), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 196/508 (38%), Positives = 293/508 (57%), Gaps = 28/508 (5%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ K+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQAAKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVRAERNVLIFDLGGGTFDVSILTTEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNRGID-DNFLLLDVIPLSLGIETIGGLVEKIIF 2428
L SI+PD+AV +GAA+QA LSG++ + + LLLDV PLSLGIET GG++ +I
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIK 415
Query: 2429 RNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIK 2488
RNTTIP + FTT+ DNQ + I+V +GE + K+ +L FEL IPP P G +I+
Sbjct: 416 RNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIE 475
Query: 2489 VTYQVDADGLLSIFAYEKISGKKKFITI 2516
VT+ +DA+G+L++ A +K +GK+ ITI
Sbjct: 476 VTFDIDANGILNVSAVDKSTGKENKITI 503
>pdb|4EB5|A Chain A, A. Fulgidus Iscs-Iscu Complex Structure
pdb|4EB5|B Chain B, A. Fulgidus Iscs-Iscu Complex Structure
pdb|4EB7|A Chain A, A. Fulgidus Iscs-Iscu Complex Structure
pdb|4EB7|B Chain B, A. Fulgidus Iscs-Iscu Complex Structure
pdb|4HVK|A Chain A, Crystal Structure And Functional Studies Of An Unusual
L-Cysteine Desulfurase From Archaeoglobus Fulgidus
Length = 382
Score = 294 bits (752), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 150/367 (40%), Positives = 247/367 (67%), Gaps = 7/367 (1%)
Query: 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREI 61
DY++ P+D R+++ M+PY+ FGNP+S H YG+ A +A+++AR +VA+L+ +
Sbjct: 5 DYTSAKPVDERILEAMLPYMTESFGNPSSV-HSYGFKAREAVQEAREKVAKLVNGGGGTV 63
Query: 62 IWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN 121
++TSGATE+NNLAI G A ++GKHI+ EH SV++ + L+ GF V Y+
Sbjct: 64 VFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKY 123
Query: 122 GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKID 181
G + +S +++K+ DTILVSV NNEIG IQP+ EI E+ K + H DA +VG+I+
Sbjct: 124 GEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIE 182
Query: 182 INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQI 241
++++ D+++ S++ IYGPKG+GAL+IR+ +++ I GGG E GLRSG+ I
Sbjct: 183 VDVEKIGADMLTISSNDIYGPKGVGALWIRK--EAKLQPVILGGGQENGLRSGSENVPSI 240
Query: 242 VGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI 301
VG G+A + +E +EE +R+ L+ R+ + +++ IEE Y+NG R+P+N+N+ F++I
Sbjct: 241 VGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK-IEESYLNGHPEKRLPNNVNVRFSYI 299
Query: 302 EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 359
EGES+++++ I S+GSAC+S +L+PS+VL A G E AH ++ T+GR+ T++++
Sbjct: 300 EGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDV 359
Query: 360 DFTIKLL 366
D +++L
Sbjct: 360 DRLLEVL 366
Score = 288 bits (737), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 244/364 (67%), Gaps = 7/364 (1%)
Query: 1401 ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWT 1460
+ P+D R+++ M+PY+ FGNP+S H YG+ A +A+++AR +VA+L+ +++T
Sbjct: 8 SAKPVDERILEAMLPYMTESFGNPSSV-HSYGFKAREAVQEAREKVAKLVNGGGGTVVFT 66
Query: 1461 SGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLI 1520
SGATE+NNLAI G A ++GKHI+ EH SV++ + L+ GF V Y+ G +
Sbjct: 67 SGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEV 126
Query: 1521 TLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINI 1580
+S +++K+ DTILVSV NNEIG IQP+ EI E+ K + H DA +VG+I++++
Sbjct: 127 DVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDV 185
Query: 1581 QNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGM 1640
+ D+++ S++ IYGPKG+GAL+IR+ +++ I GGG E GLRSG+ IVG
Sbjct: 186 EKIGADMLTISSNDIYGPKGVGALWIRK--EAKLQPVILGGGQENGLRSGSENVPSIVGF 243
Query: 1641 GEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGE 1700
G+A + +E +EE +R+ L+ R+ + +++ IEE Y+NG R+P+N+N+ F++IEGE
Sbjct: 244 GKAAEITAMEWREEAERLRRLRDRIIDNVLK-IEESYLNGHPEKRLPNNVNVRFSYIEGE 302
Query: 1701 SLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFT 1758
S+++++ I S+GSAC+S +L+PS+VL A G E AH ++ T+GR+ T++++D
Sbjct: 303 SIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRL 362
Query: 1759 IKLL 1762
+++L
Sbjct: 363 LEVL 366
>pdb|3VAX|A Chain A, Crytal Structure Of Dnda From Streptomyces Lividans
pdb|3VAX|B Chain B, Crytal Structure Of Dnda From Streptomyces Lividans
Length = 400
Score = 273 bits (698), Expect = 9e-73, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 223/356 (62%), Gaps = 11/356 (3%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE 60
+D +ATT +D RV D ++ ++ +FGN SR H YG A++ +E+AR +A + A+P E
Sbjct: 24 LDAAATTRVDQRVADIVLHWMTAEFGNAGSR-HEYGIRAKRGVERAREYLASTVSAEPDE 82
Query: 61 IIWTSGATESNNLAIKGAAHFYKKRGK-HIITVQTEHKSVLDSIRKLENDGFRVTYLKPK 119
+I+TSGATESNN+A+ G A + ++ G+ HIIT EHK+VL+ + L GF V +L P
Sbjct: 83 LIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPG 142
Query: 120 NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGK 179
+G I++ + E++ DT+LVS+M VNNE GVIQP+ E+ + R+ H DAAQ GK
Sbjct: 143 PSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGK 202
Query: 180 IDINIQNYKVDLMSFSAHKIYGPKGIGALYIRR-----NPRTRIEAQIHGGGHEYGLRSG 234
+ ++ +D++S S HKI PKG+GAL RR + R +E + GGG E LR G
Sbjct: 203 VPGDLTT-PIDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPG 261
Query: 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNL 294
TL I+G+ EA ++ E + L+ RL GL + +NGD ++ +PH L
Sbjct: 262 TLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLAST--SFQVNGDQDHVVPHIL 319
Query: 295 NISFNFIEGESLLMAIKD-IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT 349
N+SF ++ E+ L+ +KD +AV++GSA TSAS PS+VLRA+G +E A S+RF+
Sbjct: 320 NLSFEDVDAEAFLVTLKDLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFS 375
Score = 270 bits (690), Expect = 7e-72, Method: Composition-based stats.
Identities = 148/352 (42%), Positives = 220/352 (62%), Gaps = 11/352 (3%)
Query: 1401 ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWT 1460
ATT +D RV D ++ ++ +FGN SR H YG A++ +E+AR +A + A+P E+I+T
Sbjct: 28 ATTRVDQRVADIVLHWMTAEFGNAGSR-HEYGIRAKRGVERAREYLASTVSAEPDELIFT 86
Query: 1461 SGATESNNLAIKGAAHFYKKRGK-HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGL 1519
SGATESNN+A+ G A + ++ G+ HIIT EHK+VL+ + L GF V +L P +G
Sbjct: 87 SGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGR 146
Query: 1520 ITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN 1579
I++ + E++ DT+LVS+M VNNE GVIQP+ E+ + R+ H DAAQ GK+ +
Sbjct: 147 ISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGD 206
Query: 1580 IQNYKVDLMSFSAHKIYGPKGIGALYIRR-----NPRTRIEAQIHGGGHEYGLRSGTLAT 1634
+ +D++S S HKI PKG+GAL RR + R +E + GGG E LR GTL
Sbjct: 207 LTT-PIDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPV 265
Query: 1635 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF 1694
I+G+ EA ++ E + L+ RL GL + +NGD ++ +PH LN+SF
Sbjct: 266 PLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLAST--SFQVNGDQDHVVPHILNLSF 323
Query: 1695 NFIEGESLLMAIKD-IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT 1745
++ E+ L+ +KD +AV++GSA TSAS PS+VLRA+G +E A S+RF+
Sbjct: 324 EDVDAEAFLVTLKDLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFS 375
>pdb|1ECX|A Chain A, Nifs-Like Protein
pdb|1ECX|B Chain B, Nifs-Like Protein
Length = 384
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 223/367 (60%), Gaps = 9/367 (2%)
Query: 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREI 61
D +ATT +D RV+++MI + R ++GNP S H G A +EKAR +VA+++ P EI
Sbjct: 6 DNNATTRVDDRVLEEMIVFYREKYGNPNS-AHGMGIEANLHMEKAREKVAKVLGVSPSEI 64
Query: 62 IWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN 121
+TS ATES N +K A ++KR + IIT EHK+VL++++ L GF+V Y+ +
Sbjct: 65 FFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSR 124
Query: 122 GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG--VIFHCDAAQAVGK 179
G++ L +LE+ + DT LVS+M NNE+G IQP+ ++ + + K + H DA Q +GK
Sbjct: 125 GVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGK 184
Query: 180 IDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATH 239
I +++ +VD SFSAHK +GPKG+G YIR+ I IHGGG E GLRSGT
Sbjct: 185 IPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKG--VPIRPLIHGGGQERGLRSGTQNVP 242
Query: 240 QIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN 299
IVG A +A E+ E K + L+ +L +GLM I +++ +P+ L++SF
Sbjct: 243 GIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEIS--LPNTLSVSFP 300
Query: 300 FIEGESL--LMAIKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEK 357
I G +L L++ I VS+ SACTS +VL A+G + +A +IR ++ ++ TE+
Sbjct: 301 NIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEE 360
Query: 358 EIDFTIK 364
E+D+ +K
Sbjct: 361 EVDYFLK 367
Score = 257 bits (657), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 222/365 (60%), Gaps = 9/365 (2%)
Query: 1400 DATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIW 1459
+ATT +D RV+++MI + R ++GNP S H G A +EKAR +VA+++ P EI +
Sbjct: 8 NATTRVDDRVLEEMIVFYREKYGNPNS-AHGMGIEANLHMEKAREKVAKVLGVSPSEIFF 66
Query: 1460 TSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGL 1519
TS ATES N +K A ++KR + IIT EHK+VL++++ L GF+V Y+ + G+
Sbjct: 67 TSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGV 126
Query: 1520 ITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG--VIFHCDAAQAVGKID 1577
+ L +LE+ + DT LVS+M NNE+G IQP+ ++ + + K + H DA Q +GKI
Sbjct: 127 VKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIP 186
Query: 1578 INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQI 1637
+++ +VD SFSAHK +GPKG+G YIR+ I IHGGG E GLRSGT I
Sbjct: 187 FSLEKLEVDYASFSAHKFHGPKGVGITYIRKG--VPIRPLIHGGGQERGLRSGTQNVPGI 244
Query: 1638 VGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI 1697
VG A +A E+ E K + L+ +L +GLM I +++ +P+ L++SF I
Sbjct: 245 VGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEIS--LPNTLSVSFPNI 302
Query: 1698 EGESL--LMAIKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 1755
G +L L++ I VS+ SACTS +VL A+G + +A +IR ++ ++ TE+E+
Sbjct: 303 RGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEV 362
Query: 1756 DFTIK 1760
D+ +K
Sbjct: 363 DYFLK 367
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe
Bound To The Atpase Domain Of The Molecular Chaperone
Dnak
Length = 383
Score = 253 bits (646), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 223/387 (57%), Gaps = 35/387 (9%)
Query: 640 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 699
IGID GTTNS VAI+ P VL++ G PSI+ Y DG+ VG+ AK +P+N
Sbjct: 5 IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 64
Query: 700 TISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTIS-----------GIK-SPIEISA 747
T+ +IKR I R ++ + Q ++ K I+ G K +P +ISA
Sbjct: 65 TLFAIKRLIGRRFQD-------EEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISA 117
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
++ +KK AE+ + + AVITVPAYFND QRQ TK+A ++AGL V R++NEPT+AA+
Sbjct: 118 EVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAAL 177
Query: 808 AYKLDKNIFEGIFAVYDLGGGTFDISILKFK----NGVFKVLSVGGDSNLGGDDFDYCLF 863
AY LDK AVYDLGGGTFDISI++ F+VL+ GD++LGG+DFD L
Sbjct: 178 AYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237
Query: 864 SWIVKNAFLKK--LSYKDVNILMIKSREIKELL------SYQSSVKLNVKLSD---KKIV 912
+++V+ F K + ++ + M + +E E + Q+ V L +D K +
Sbjct: 238 NYLVEE-FKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHM 296
Query: 913 NITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNF 972
NI + + ++ + LVNR+I L AL DA L++ DI++VILVGG TRM + + V+ F
Sbjct: 297 NIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEF 356
Query: 973 FKTTLLTSIDPDKAVVFGAAIQANFLS 999
F ++PD+AV GAA+Q L+
Sbjct: 357 FGKEPRKDVNPDEAVAIGAAVQGGVLT 383
Score = 253 bits (646), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 223/387 (57%), Gaps = 35/387 (9%)
Query: 2036 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 2095
IGID GTTNS VAI+ P VL++ G PSI+ Y DG+ VG+ AK +P+N
Sbjct: 5 IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 64
Query: 2096 TISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTIS-----------GIK-SPIEISA 2143
T+ +IKR I R ++ + Q ++ K I+ G K +P +ISA
Sbjct: 65 TLFAIKRLIGRRFQD-------EEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISA 117
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
++ +KK AE+ + + AVITVPAYFND QRQ TK+A ++AGL V R++NEPT+AA+
Sbjct: 118 EVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAAL 177
Query: 2204 AYKLDKNIFEGIFAVYDLGGGTFDISILKFK----NGVFKVLSVGGDSNLGGDDFDYCLF 2259
AY LDK AVYDLGGGTFDISI++ F+VL+ GD++LGG+DFD L
Sbjct: 178 AYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237
Query: 2260 SWIVKNAFLKK--LSYKDVNILMIKSREIKELL------SYQSSVKLNVKLSD---KKIV 2308
+++V+ F K + ++ + M + +E E + Q+ V L +D K +
Sbjct: 238 NYLVEE-FKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHM 296
Query: 2309 NITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNF 2368
NI + + ++ + LVNR+I L AL DA L++ DI++VILVGG TRM + + V+ F
Sbjct: 297 NIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEF 356
Query: 2369 FKTTLLTSIDPDKAVVFGAAIQANFLS 2395
F ++PD+AV GAA+Q L+
Sbjct: 357 FGKEPRKDVNPDEAVAIGAAVQGGVLT 383
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 250 bits (638), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 234/388 (60%), Gaps = 28/388 (7%)
Query: 633 VKNKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKIT 692
V+N IGID GTT S VA+++N E+L ++ G + PS V + D ++ +G AK
Sbjct: 10 VENYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERL-IGDAAKNQ 68
Query: 693 QNIDPKNTISSIKRFIA---------RDLKNINTNSFPYDFQNKFGMLHIK-TISGIK-- 740
+P+NTI IKR I +D+K++ P++ NK G ++ ++ G K
Sbjct: 69 VAANPQNTIFDIKRLIGLKYNDRSVQKDIKHL-----PFNVVNKDGKPAVEVSVKGEKKV 123
Query: 741 -SPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLL 799
+P EIS I +K+IAE+ + ++ AV+TVPAYFND QRQ TK+A +AGLNVLR++
Sbjct: 124 FTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIV 183
Query: 800 NEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFD 859
NEPT+AAIAY LDK+ E VYDLGGGTFD+S+L +NGVF+V + GD++LGG+DFD
Sbjct: 184 NEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFD 243
Query: 860 YCLFSWIVKNAFLKK--LSYKDVNILMIK----SREIKELLSYQSSVKLNV-KLSDKKIV 912
Y + ++K AF KK + D N + K + + K LS Q S ++ + D +
Sbjct: 244 YKIVRQLIK-AFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDL 302
Query: 913 NITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNF 972
+ T+ +F + L +T+ K L D+ L KD+++++LVGGSTR+ + + + ++
Sbjct: 303 SETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESY 362
Query: 973 FKTTLLT-SIDPDKAVVFGAAIQANFLS 999
F + I+PD+AV +GAA+QA LS
Sbjct: 363 FDGKKASKGINPDEAVAYGAAVQAGVLS 390
Score = 250 bits (638), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 234/388 (60%), Gaps = 28/388 (7%)
Query: 2029 VKNKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKIT 2088
V+N IGID GTT S VA+++N E+L ++ G + PS V + D ++ +G AK
Sbjct: 10 VENYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERL-IGDAAKNQ 68
Query: 2089 QNIDPKNTISSIKRFIA---------RDLKNINTNSFPYDFQNKFGMLHIK-TISGIK-- 2136
+P+NTI IKR I +D+K++ P++ NK G ++ ++ G K
Sbjct: 69 VAANPQNTIFDIKRLIGLKYNDRSVQKDIKHL-----PFNVVNKDGKPAVEVSVKGEKKV 123
Query: 2137 -SPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLL 2195
+P EIS I +K+IAE+ + ++ AV+TVPAYFND QRQ TK+A +AGLNVLR++
Sbjct: 124 FTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIV 183
Query: 2196 NEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFD 2255
NEPT+AAIAY LDK+ E VYDLGGGTFD+S+L +NGVF+V + GD++LGG+DFD
Sbjct: 184 NEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFD 243
Query: 2256 YCLFSWIVKNAFLKK--LSYKDVNILMIK----SREIKELLSYQSSVKLNV-KLSDKKIV 2308
Y + ++K AF KK + D N + K + + K LS Q S ++ + D +
Sbjct: 244 YKIVRQLIK-AFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDL 302
Query: 2309 NITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNF 2368
+ T+ +F + L +T+ K L D+ L KD+++++LVGGSTR+ + + + ++
Sbjct: 303 SETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESY 362
Query: 2369 FKTTLLT-SIDPDKAVVFGAAIQANFLS 2395
F + I+PD+AV +GAA+QA LS
Sbjct: 363 FDGKKASKGINPDEAVAYGAAVQAGVLS 390
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED WITH
ADP
Length = 394
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 234/388 (60%), Gaps = 28/388 (7%)
Query: 633 VKNKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKIT 692
V+N IGID GTT S VA+++N E+L ++ G + PS V + D ++ +G AK
Sbjct: 14 VENYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERL-IGDAAKNQ 72
Query: 693 QNIDPKNTISSIKRFIA---------RDLKNINTNSFPYDFQNKFGMLHIK-TISGIK-- 740
+P+NTI IKR I +D+K++ P++ NK G ++ ++ G K
Sbjct: 73 VAANPQNTIFDIKRLIGLKYNDRSVQKDIKHL-----PFNVVNKDGKPAVEVSVKGEKKV 127
Query: 741 -SPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLL 799
+P EIS I +K+IAE+ + ++ AV+TVPAYFND QRQ TK+A +AGLNVLR++
Sbjct: 128 FTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIV 187
Query: 800 NEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFD 859
NEPT+AAIAY LDK+ E VYDLGGGTFD+S+L +NGVF+V + GD++LGG+DFD
Sbjct: 188 NEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFD 247
Query: 860 YCLFSWIVKNAFLKK--LSYKDVNILMIK----SREIKELLSYQSSVKLNV-KLSDKKIV 912
Y + ++K AF KK + D N + K + + K LS Q S ++ + D +
Sbjct: 248 YKIVRQLIK-AFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDL 306
Query: 913 NITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNF 972
+ T+ +F + L +T+ K L D+ L KD+++++LVGGSTR+ + + + ++
Sbjct: 307 SETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESY 366
Query: 973 FKTTLLT-SIDPDKAVVFGAAIQANFLS 999
F + I+PD+AV +GAA+QA LS
Sbjct: 367 FDGKKASKGINPDEAVAYGAAVQAGVLS 394
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 234/388 (60%), Gaps = 28/388 (7%)
Query: 2029 VKNKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKIT 2088
V+N IGID GTT S VA+++N E+L ++ G + PS V + D ++ +G AK
Sbjct: 14 VENYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERL-IGDAAKNQ 72
Query: 2089 QNIDPKNTISSIKRFIA---------RDLKNINTNSFPYDFQNKFGMLHIK-TISGIK-- 2136
+P+NTI IKR I +D+K++ P++ NK G ++ ++ G K
Sbjct: 73 VAANPQNTIFDIKRLIGLKYNDRSVQKDIKHL-----PFNVVNKDGKPAVEVSVKGEKKV 127
Query: 2137 -SPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLL 2195
+P EIS I +K+IAE+ + ++ AV+TVPAYFND QRQ TK+A +AGLNVLR++
Sbjct: 128 FTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIV 187
Query: 2196 NEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFD 2255
NEPT+AAIAY LDK+ E VYDLGGGTFD+S+L +NGVF+V + GD++LGG+DFD
Sbjct: 188 NEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFD 247
Query: 2256 YCLFSWIVKNAFLKK--LSYKDVNILMIK----SREIKELLSYQSSVKLNV-KLSDKKIV 2308
Y + ++K AF KK + D N + K + + K LS Q S ++ + D +
Sbjct: 248 YKIVRQLIK-AFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDL 306
Query: 2309 NITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNF 2368
+ T+ +F + L +T+ K L D+ L KD+++++LVGGSTR+ + + + ++
Sbjct: 307 SETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESY 366
Query: 2369 FKTTLLT-SIDPDKAVVFGAAIQANFLS 2395
F + I+PD+AV +GAA+QA LS
Sbjct: 367 FDGKKASKGINPDEAVAYGAAVQAGVLS 394
>pdb|1EG5|A Chain A, Nifs-like Protein
pdb|1EG5|B Chain B, Nifs-like Protein
Length = 384
Score = 246 bits (628), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/368 (38%), Positives = 216/368 (58%), Gaps = 9/368 (2%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE 60
D +ATT +D RV+++ I + R ++GNP S H G A EKAR +VA+++ P E
Sbjct: 5 FDNNATTRVDDRVLEEXIVFYREKYGNPNS-AHGXGIEANLHXEKAREKVAKVLGVSPSE 63
Query: 61 IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN 120
I +TS ATES N +K A ++KR + IIT EHK+VL++ + L GF+V Y+ +
Sbjct: 64 IFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETXKYLSXKGFKVKYVPVDS 123
Query: 121 NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG--VIFHCDAAQAVG 178
G++ L +LE+ + DT LVS+ NNE+G IQP+ ++ + + K + H DA Q +G
Sbjct: 124 RGVVKLEELEKLVDEDTFLVSIXAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIG 183
Query: 179 KIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238
KI +++ +VD SFSAHK +GPKG+G YIR+ I IHGGG E GLRSGT
Sbjct: 184 KIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKG--VPIRPLIHGGGQERGLRSGTQNV 241
Query: 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF 298
IVG A +A E+ E K L+ +L +GL I +++ +P+ L++SF
Sbjct: 242 PGIVGAARAXEIAVEELSEAAKHXEKLRSKLVSGLXNLGAHIITPLEIS--LPNTLSVSF 299
Query: 299 NFIEGESL--LMAIKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTE 356
I G +L L++ I VS+ SACTS +VL A G + +A +IR ++ ++ TE
Sbjct: 300 PNIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAXGVDRRIAQGAIRISLCKYNTE 359
Query: 357 KEIDFTIK 364
+E+D+ +K
Sbjct: 360 EEVDYFLK 367
Score = 245 bits (625), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/365 (38%), Positives = 215/365 (58%), Gaps = 9/365 (2%)
Query: 1400 DATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIW 1459
+ATT +D RV+++ I + R ++GNP S H G A EKAR +VA+++ P EI +
Sbjct: 8 NATTRVDDRVLEEXIVFYREKYGNPNS-AHGXGIEANLHXEKAREKVAKVLGVSPSEIFF 66
Query: 1460 TSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGL 1519
TS ATES N +K A ++KR + IIT EHK+VL++ + L GF+V Y+ + G+
Sbjct: 67 TSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETXKYLSXKGFKVKYVPVDSRGV 126
Query: 1520 ITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG--VIFHCDAAQAVGKID 1577
+ L +LE+ + DT LVS+ NNE+G IQP+ ++ + + K + H DA Q +GKI
Sbjct: 127 VKLEELEKLVDEDTFLVSIXAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIP 186
Query: 1578 INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQI 1637
+++ +VD SFSAHK +GPKG+G YIR+ I IHGGG E GLRSGT I
Sbjct: 187 FSLEKLEVDYASFSAHKFHGPKGVGITYIRKG--VPIRPLIHGGGQERGLRSGTQNVPGI 244
Query: 1638 VGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI 1697
VG A +A E+ E K L+ +L +GL I +++ +P+ L++SF I
Sbjct: 245 VGAARAXEIAVEELSEAAKHXEKLRSKLVSGLXNLGAHIITPLEIS--LPNTLSVSFPNI 302
Query: 1698 EGESL--LMAIKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 1755
G +L L++ I VS+ SACTS +VL A G + +A +IR ++ ++ TE+E+
Sbjct: 303 RGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAXGVDRRIAQGAIRISLCKYNTEEEV 362
Query: 1756 DFTIK 1760
D+ +K
Sbjct: 363 DYFLK 367
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 215/386 (55%), Gaps = 30/386 (7%)
Query: 640 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 699
+GID GTT S V + +N E++ + G + PS V + P+G+ +G AK +P+N
Sbjct: 29 VGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPEN 88
Query: 700 TISSIKRFIAR--------------DLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEI 745
T+ KR I R K + + PY Q G KT + P EI
Sbjct: 89 TVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPY-IQVDIGGGQTKTFA----PEEI 143
Query: 746 SAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSA 805
SA + +K+ AE + ++ AV+TVPAYFND QRQ TK+A +AGLNV+R++NEPT+A
Sbjct: 144 SAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAA 203
Query: 806 AIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
AIAY LDK E V+DLGGGTFD+S+L NGVF+V++ GD++LGG+DFD +
Sbjct: 204 AIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEH 263
Query: 866 IVKNAFLKKLSYKDV----NILMIKSREI---KELLSYQSSVKLNVK-LSDKKIVNITID 917
+K KK + KDV + RE+ K LS Q ++ ++ + + + T+
Sbjct: 264 FIK--LYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLT 321
Query: 918 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTL 977
+F + L T+ K L D++L DI+ ++LVGGSTR+ I + V FF
Sbjct: 322 RAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKE 381
Query: 978 LT-SIDPDKAVVFGAAIQANFLSGNR 1002
+ I+PD+AV +GAA+QA LSG++
Sbjct: 382 PSRGINPDEAVAYGAAVQAGVLSGDQ 407
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 215/386 (55%), Gaps = 30/386 (7%)
Query: 2036 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 2095
+GID GTT S V + +N E++ + G + PS V + P+G+ +G AK +P+N
Sbjct: 29 VGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPEN 88
Query: 2096 TISSIKRFIAR--------------DLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEI 2141
T+ KR I R K + + PY Q G KT + P EI
Sbjct: 89 TVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPY-IQVDIGGGQTKTFA----PEEI 143
Query: 2142 SAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSA 2201
SA + +K+ AE + ++ AV+TVPAYFND QRQ TK+A +AGLNV+R++NEPT+A
Sbjct: 144 SAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAA 203
Query: 2202 AIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
AIAY LDK E V+DLGGGTFD+S+L NGVF+V++ GD++LGG+DFD +
Sbjct: 204 AIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEH 263
Query: 2262 IVKNAFLKKLSYKDV----NILMIKSREI---KELLSYQSSVKLNVK-LSDKKIVNITID 2313
+K KK + KDV + RE+ K LS Q ++ ++ + + + T+
Sbjct: 264 FIK--LYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLT 321
Query: 2314 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTL 2373
+F + L T+ K L D++L DI+ ++LVGGSTR+ I + V FF
Sbjct: 322 RAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKE 381
Query: 2374 LT-SIDPDKAVVFGAAIQANFLSGNR 2398
+ I+PD+AV +GAA+QA LSG++
Sbjct: 382 PSRGINPDEAVAYGAAVQAGVLSGDQ 407
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5
BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5
BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5
BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5
BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5
/ Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5
/ Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5
BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5
BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
Length = 384
Score = 237 bits (604), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 213/384 (55%), Gaps = 30/384 (7%)
Query: 640 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 699
+GID GTT S V + +N E++ + G + PS V + P+G+ +G AK +P+N
Sbjct: 8 VGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPEN 67
Query: 700 TISSIKRFIAR--------------DLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEI 745
T+ KR I R K + + PY Q G KT + P EI
Sbjct: 68 TVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPY-IQVDIGGGQTKTFA----PEEI 122
Query: 746 SAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSA 805
SA + +K+ AE + ++ AV+TVPAYFND QRQ TK+A +AGLNV+R++NEPT+A
Sbjct: 123 SAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAA 182
Query: 806 AIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
AIAY LDK E V+DLGGGTFD+S+L NGVF+V++ GD++LGG+DFD +
Sbjct: 183 AIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEH 242
Query: 866 IVKNAFLKKLSYKDV----NILMIKSREI---KELLSYQSSVKLNVK-LSDKKIVNITID 917
+K KK + KDV + RE+ K LS Q ++ ++ + + + T+
Sbjct: 243 FIK--LYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLT 300
Query: 918 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTL 977
+F + L T+ K L D++L DI+ ++LVGGSTR+ I + V FF
Sbjct: 301 RAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKE 360
Query: 978 LT-SIDPDKAVVFGAAIQANFLSG 1000
+ I+PD+AV +GAA+QA LSG
Sbjct: 361 PSRGINPDEAVAYGAAVQAGVLSG 384
Score = 237 bits (604), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 213/384 (55%), Gaps = 30/384 (7%)
Query: 2036 IGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKN 2095
+GID GTT S V + +N E++ + G + PS V + P+G+ +G AK +P+N
Sbjct: 8 VGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPEN 67
Query: 2096 TISSIKRFIAR--------------DLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEI 2141
T+ KR I R K + + PY Q G KT + P EI
Sbjct: 68 TVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPY-IQVDIGGGQTKTFA----PEEI 122
Query: 2142 SAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSA 2201
SA + +K+ AE + ++ AV+TVPAYFND QRQ TK+A +AGLNV+R++NEPT+A
Sbjct: 123 SAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAA 182
Query: 2202 AIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
AIAY LDK E V+DLGGGTFD+S+L NGVF+V++ GD++LGG+DFD +
Sbjct: 183 AIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEH 242
Query: 2262 IVKNAFLKKLSYKDV----NILMIKSREI---KELLSYQSSVKLNVK-LSDKKIVNITID 2313
+K KK + KDV + RE+ K LS Q ++ ++ + + + T+
Sbjct: 243 FIK--LYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLT 300
Query: 2314 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTL 2373
+F + L T+ K L D++L DI+ ++LVGGSTR+ I + V FF
Sbjct: 301 RAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKE 360
Query: 2374 LT-SIDPDKAVVFGAAIQANFLSG 2396
+ I+PD+AV +GAA+QA LSG
Sbjct: 361 PSRGINPDEAVAYGAAVQAGVLSG 384
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 221 bits (562), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 218/398 (54%), Gaps = 27/398 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNRGIDDNFLLL 1011
L SI+PD+AV +GAA+QA LSG++ + LLL
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393
Score = 221 bits (562), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 218/398 (54%), Gaps = 27/398 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNRGIDDNFLLL 2407
L SI+PD+AV +GAA+QA LSG++ + LLL
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In The
Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And Mutant
Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And Mutant
Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A 70k
Heat-Shock Cognate Protein
Length = 386
Score = 220 bits (561), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 220 bits (561), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSKVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSKVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And Mutant
Atpase Fragment
Length = 386
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++N+PT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINQPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++N+PT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINQPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 218 bits (556), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID G+T S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGSTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 218 bits (556), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID G+T S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGSTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The
Structure Of The Active Site But Is Not Essential For Atp
Hydrolysis
Length = 386
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGG FD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGVFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGG FD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGVFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And Mutant
Atpase Fragment
Length = 386
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTF++SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFNVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTF++SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFNVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And Mutant
Atpase Fragment
Length = 386
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E +++LGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E +++LGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And Mutant
Atpase Fragment
Length = 386
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GI+ GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGINLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 214/389 (55%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GI+ GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGINLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The
Structure Of The Active Site But Is Not Essential For Atp
Hydrolysis
Length = 386
Score = 218 bits (554), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGG FD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGEFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 218 bits (554), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGG FD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGEFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And Mutant
Atpase Fragment
Length = 386
Score = 218 bits (554), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++N PT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 218 bits (554), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++N PT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And Mutant
Atpase Fragment
Length = 386
Score = 217 bits (553), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GI GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGISLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 217 bits (553), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GI GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGISLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And Mutant
Atpase Fragment
Length = 386
Score = 217 bits (553), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTF +SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFSVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 217 bits (553), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTF +SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFSVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And Mutant
Atpase Fragment
Length = 386
Score = 217 bits (553), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++ LGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFSLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 217 bits (553), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++ LGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFSLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge
3
Length = 386
Score = 217 bits (553), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTF +SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFKVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
Score = 217 bits (553), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 213/389 (54%), Gaps = 27/389 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTF +SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFKVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA LSG++
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDK 384
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 217 bits (552), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 217/398 (54%), Gaps = 27/398 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVL ++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLCIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLSGNRGIDDNFLLL 1011
L SI+PD+AV +GAA+QA LSG++ + LLL
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393
Score = 217 bits (552), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 217/398 (54%), Gaps = 27/398 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVL ++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLCIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLSGNRGIDDNFLLL 2407
L SI+PD+AV +GAA+QA LSG++ + LLL
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 404
Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 209/386 (54%), Gaps = 29/386 (7%)
Query: 639 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 698
+IGID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 25 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 83
Query: 699 NTISSIKRFIARDLKNINTNS----FPYDFQNKFG----MLHIKTISGIKSPIEISAQIF 750
NTI KR I R ++ S +P+ ++ G + K + P EIS+ +
Sbjct: 84 NTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVL 143
Query: 751 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 810
+K+IAE + ++ AVITVPAYFND QRQ TK+A + GLNVLR++NEPT+AAIAY
Sbjct: 144 TKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYG 203
Query: 811 LDKNIFEGI---FAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIV 867
LDK G ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD + S +
Sbjct: 204 LDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLA 263
Query: 868 KNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TI 916
+ K+ KD+ R ++ L + K + S + + I +I
Sbjct: 264 EE--FKRKHKKDIG---PNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 318
Query: 917 DMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTT 976
+F + L T+ KAL DA L I ++LVGGSTR+ I + + +FF
Sbjct: 319 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 378
Query: 977 LLT-SIDPDKAVVFGAAIQANFLSGN 1001
L SI+PD+AV +GAA+QA L G+
Sbjct: 379 ELNKSINPDEAVAYGAAVQAAILIGD 404
Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 209/386 (54%), Gaps = 29/386 (7%)
Query: 2035 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 2094
+IGID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 25 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 83
Query: 2095 NTISSIKRFIARDLKNINTNS----FPYDFQNKFG----MLHIKTISGIKSPIEISAQIF 2146
NTI KR I R ++ S +P+ ++ G + K + P EIS+ +
Sbjct: 84 NTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVL 143
Query: 2147 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 2206
+K+IAE + ++ AVITVPAYFND QRQ TK+A + GLNVLR++NEPT+AAIAY
Sbjct: 144 TKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYG 203
Query: 2207 LDKNIFEGI---FAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIV 2263
LDK G ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD + S +
Sbjct: 204 LDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLA 263
Query: 2264 KNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TI 2312
+ K+ KD+ R ++ L + K + S + + I +I
Sbjct: 264 EE--FKRKHKKDIG---PNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 318
Query: 2313 DMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTT 2372
+F + L T+ KAL DA L I ++LVGGSTR+ I + + +FF
Sbjct: 319 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 378
Query: 2373 LLT-SIDPDKAVVFGAAIQANFLSGN 2397
L SI+PD+AV +GAA+QA L G+
Sbjct: 379 ELNKSINPDEAVAYGAAVQAAILIGD 404
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And Inorganic
Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And Inorganic
Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 403
Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 206/385 (53%), Gaps = 27/385 (7%)
Query: 638 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDP 697
+++GID GTT S V + + E+L + G PS V + D + VG AK ++P
Sbjct: 25 LAVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFT-DTERLVGDAAKSQAALNP 83
Query: 698 KNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISAQI 749
NT+ KR I R + S +P+ ++ G ++ + P EIS+ +
Sbjct: 84 HNTVFDAKRLIGRKFADTTVQSDMKHWPFRVVSEGGKPKVRVCYRGEDKTFYPEEISSMV 143
Query: 750 FITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAY 809
+K+ AE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAIAY
Sbjct: 144 LSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAY 203
Query: 810 KLD-KNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 868
LD + E ++DLGGGTFD+S+L GVF+V + GD++LGG+DFD L
Sbjct: 204 GLDRRGAGERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLV----- 258
Query: 869 NAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TID 917
N F+++ K L R ++ L + K + S + + I +I
Sbjct: 259 NHFMEEFRRKHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSIT 318
Query: 918 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTL 977
+F + L T+ KAL DA L I++V+LVGGSTR+ + + + +FF
Sbjct: 319 RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGKE 378
Query: 978 LT-SIDPDKAVVFGAAIQANFLSGN 1001
L SI+PD+AV +GAA+QA L G+
Sbjct: 379 LNKSINPDEAVAYGAAVQAAVLMGD 403
Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 206/385 (53%), Gaps = 27/385 (7%)
Query: 2034 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDP 2093
+++GID GTT S V + + E+L + G PS V + D + VG AK ++P
Sbjct: 25 LAVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFT-DTERLVGDAAKSQAALNP 83
Query: 2094 KNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISAQI 2145
NT+ KR I R + S +P+ ++ G ++ + P EIS+ +
Sbjct: 84 HNTVFDAKRLIGRKFADTTVQSDMKHWPFRVVSEGGKPKVRVCYRGEDKTFYPEEISSMV 143
Query: 2146 FITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAY 2205
+K+ AE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAIAY
Sbjct: 144 LSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAY 203
Query: 2206 KLD-KNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 2264
LD + E ++DLGGGTFD+S+L GVF+V + GD++LGG+DFD L
Sbjct: 204 GLDRRGAGERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLV----- 258
Query: 2265 NAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TID 2313
N F+++ K L R ++ L + K + S + + I +I
Sbjct: 259 NHFMEEFRRKHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSIT 318
Query: 2314 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTL 2373
+F + L T+ KAL DA L I++V+LVGGSTR+ + + + +FF
Sbjct: 319 RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGKE 378
Query: 2374 LT-SIDPDKAVVFGAAIQANFLSGN 2397
L SI+PD+AV +GAA+QA L G+
Sbjct: 379 LNKSINPDEAVAYGAAVQAAVLMGD 403
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 216 bits (550), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 211/386 (54%), Gaps = 27/386 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 7 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 65
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 66 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 125
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 126 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 185
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 186 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 243
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 244 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 300
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 301 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 360
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLS 999
L SI+PD+AV +GAA+QA LS
Sbjct: 361 GKELNKSINPDEAVAYGAAVQAAILS 386
Score = 216 bits (550), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 211/386 (54%), Gaps = 27/386 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 7 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 65
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 66 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 125
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 126 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 185
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 186 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 243
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 244 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 300
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 301 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 360
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLS 2395
L SI+PD+AV +GAA+QA LS
Sbjct: 361 GKELNKSINPDEAVAYGAAVQAAILS 386
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 215 bits (547), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 209/382 (54%), Gaps = 27/382 (7%)
Query: 639 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 698
++GID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 25 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 83
Query: 699 NTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEISAQIF 750
NT+ KR I R + S +P+ N G + ++ KS P E+S+ +
Sbjct: 84 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 143
Query: 751 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 810
+K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAIAY
Sbjct: 144 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 203
Query: 811 LDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKN 869
LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD + N
Sbjct: 204 LDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-----N 258
Query: 870 AFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TIDM 918
F+ + K + R ++ L + K + S + + I +I
Sbjct: 259 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 318
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF L
Sbjct: 319 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 378
Query: 979 T-SIDPDKAVVFGAAIQANFLS 999
SI+PD+AV +GAA+QA LS
Sbjct: 379 NKSINPDEAVAYGAAVQAAILS 400
Score = 215 bits (547), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 209/382 (54%), Gaps = 27/382 (7%)
Query: 2035 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 2094
++GID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 25 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 83
Query: 2095 NTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEISAQIF 2146
NT+ KR I R + S +P+ N G + ++ KS P E+S+ +
Sbjct: 84 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 143
Query: 2147 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 2206
+K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAIAY
Sbjct: 144 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 203
Query: 2207 LDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKN 2265
LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD + N
Sbjct: 204 LDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-----N 258
Query: 2266 AFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TIDM 2314
F+ + K + R ++ L + K + S + + I +I
Sbjct: 259 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 318
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF L
Sbjct: 319 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 378
Query: 2375 T-SIDPDKAVVFGAAIQANFLS 2395
SI+PD+AV +GAA+QA LS
Sbjct: 379 NKSINPDEAVAYGAAVQAAILS 400
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 214 bits (546), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 209/382 (54%), Gaps = 27/382 (7%)
Query: 639 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 698
++GID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 64
Query: 699 NTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEISAQIF 750
NT+ KR I R + S +P+ N G + ++ KS P E+S+ +
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 751 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 810
+K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAIAY
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 811 LDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKN 869
LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD + N
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-----N 239
Query: 870 AFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TIDM 918
F+ + K + R ++ L + K + S + + I +I
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF L
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 979 T-SIDPDKAVVFGAAIQANFLS 999
SI+PD+AV +GAA+QA LS
Sbjct: 360 NKSINPDEAVAYGAAVQAAILS 381
Score = 214 bits (546), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 209/382 (54%), Gaps = 27/382 (7%)
Query: 2035 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 2094
++GID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 64
Query: 2095 NTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEISAQIF 2146
NT+ KR I R + S +P+ N G + ++ KS P E+S+ +
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 2147 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 2206
+K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAIAY
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 2207 LDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKN 2265
LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD + N
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-----N 239
Query: 2266 AFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TIDM 2314
F+ + K + R ++ L + K + S + + I +I
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF L
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 2375 T-SIDPDKAVVFGAAIQANFLS 2395
SI+PD+AV +GAA+QA LS
Sbjct: 360 NKSINPDEAVAYGAAVQAAILS 381
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant
Length = 381
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 211/386 (54%), Gaps = 27/386 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ +R I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAERLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLS 999
L SI+PD+AV +GAA+QA LS
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILS 381
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 211/386 (54%), Gaps = 27/386 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ +R I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAERLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLS 2395
L SI+PD+AV +GAA+QA LS
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 214 bits (544), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 211/385 (54%), Gaps = 21/385 (5%)
Query: 636 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 695
K ++IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 27 KGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 85
Query: 696 DPKNTISSIKRFIARDLKN----INTNSFPYDFQNKFG----MLHIKTISGIKSPIEISA 747
+P+NT+ KR I R + + +P+ N+ G ++ K + P EIS+
Sbjct: 86 NPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYKGENKAFYPEEISS 145
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+ LK+ AE + + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 146 MVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 205
Query: 808 AYKLDK-NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 866
AY LDK E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L S
Sbjct: 206 AYGLDKGGQGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHF 265
Query: 867 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 918
V+ K+ KD V L K LS + L + L + +I
Sbjct: 266 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITR 323
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA + I++++LVGGSTR+ + + ++F L
Sbjct: 324 ARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDL 383
Query: 979 T-SIDPDKAVVFGAAIQANFLSGNR 1002
SI+PD+AV +GAA+QA L G++
Sbjct: 384 NKSINPDEAVAYGAAVQAAILMGDK 408
Score = 214 bits (544), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 211/385 (54%), Gaps = 21/385 (5%)
Query: 2032 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 2091
K ++IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 27 KGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 85
Query: 2092 DPKNTISSIKRFIARDLKN----INTNSFPYDFQNKFG----MLHIKTISGIKSPIEISA 2143
+P+NT+ KR I R + + +P+ N+ G ++ K + P EIS+
Sbjct: 86 NPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYKGENKAFYPEEISS 145
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+ LK+ AE + + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 146 MVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 205
Query: 2204 AYKLDK-NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 2262
AY LDK E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L S
Sbjct: 206 AYGLDKGGQGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHF 265
Query: 2263 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 2314
V+ K+ KD V L K LS + L + L + +I
Sbjct: 266 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITR 323
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA + I++++LVGGSTR+ + + ++F L
Sbjct: 324 ARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDL 383
Query: 2375 T-SIDPDKAVVFGAAIQANFLSGNR 2398
SI+PD+AV +GAA+QA L G++
Sbjct: 384 NKSINPDEAVAYGAAVQAAILMGDK 408
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant
Length = 381
Score = 214 bits (544), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 210/386 (54%), Gaps = 27/386 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ R I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAARLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLS 999
L SI+PD+AV +GAA+QA LS
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILS 381
Score = 214 bits (544), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 210/386 (54%), Gaps = 27/386 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ R I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAARLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLS 2395
L SI+PD+AV +GAA+QA LS
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2)
From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 214 bits (544), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 207/387 (53%), Gaps = 29/387 (7%)
Query: 639 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 698
+IGID GTT S V + ++ E++ + G PS V + D + +G AK +P
Sbjct: 7 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAXNPT 65
Query: 699 NTISSIKRFIARDLKNINTNS----FPYDFQNKFG----MLHIKTISGIKSPIEISAQIF 750
NTI KR I R ++ S +P+ ++ G + K + P EIS+ +
Sbjct: 66 NTIFDAKRLIGRKFEDATVQSDXKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSXVL 125
Query: 751 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 810
K+IAE + ++ AVITVPAYFND QRQ TK+A + GLNVLR++NEPT+AAIAY
Sbjct: 126 TKXKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYG 185
Query: 811 LDKNIFEGI---FAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIV 867
LDK G ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD S +
Sbjct: 186 LDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRXVSHLA 245
Query: 868 KNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TI 916
+ K+ KD+ R ++ L + K + S + + I +I
Sbjct: 246 EE--FKRKHKKDIG---PNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 300
Query: 917 DMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTT 976
+F + L T+ KAL DA L I ++LVGGSTR+ I + + +FF
Sbjct: 301 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 360
Query: 977 LLT-SIDPDKAVVFGAAIQANFLSGNR 1002
L SI+PD+AV +GAA+QA L G++
Sbjct: 361 ELNKSINPDEAVAYGAAVQAAILIGDK 387
Score = 214 bits (544), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 207/387 (53%), Gaps = 29/387 (7%)
Query: 2035 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 2094
+IGID GTT S V + ++ E++ + G PS V + D + +G AK +P
Sbjct: 7 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAXNPT 65
Query: 2095 NTISSIKRFIARDLKNINTNS----FPYDFQNKFG----MLHIKTISGIKSPIEISAQIF 2146
NTI KR I R ++ S +P+ ++ G + K + P EIS+ +
Sbjct: 66 NTIFDAKRLIGRKFEDATVQSDXKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSXVL 125
Query: 2147 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 2206
K+IAE + ++ AVITVPAYFND QRQ TK+A + GLNVLR++NEPT+AAIAY
Sbjct: 126 TKXKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYG 185
Query: 2207 LDKNIFEGI---FAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIV 2263
LDK G ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD S +
Sbjct: 186 LDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRXVSHLA 245
Query: 2264 KNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TI 2312
+ K+ KD+ R ++ L + K + S + + I +I
Sbjct: 246 EE--FKRKHKKDIG---PNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 300
Query: 2313 DMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTT 2372
+F + L T+ KAL DA L I ++LVGGSTR+ I + + +FF
Sbjct: 301 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 360
Query: 2373 LLT-SIDPDKAVVFGAAIQANFLSGNR 2398
L SI+PD+AV +GAA+QA L G++
Sbjct: 361 ELNKSINPDEAVAYGAAVQAAILIGDK 387
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 214 bits (544), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 210/386 (54%), Gaps = 27/386 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID G T S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGGTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLS 999
L SI+PD+AV +GAA+QA LS
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILS 381
Score = 214 bits (544), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 210/386 (54%), Gaps = 27/386 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID G T S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGGTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ KR I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLS 2395
L SI+PD+AV +GAA+QA LS
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant
Length = 381
Score = 213 bits (543), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 210/386 (54%), Gaps = 27/386 (6%)
Query: 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 694
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 695 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 746
++P NT+ R I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAMRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 747 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 806
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 807 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 866 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 914
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 915 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 974
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 975 TTLLT-SIDPDKAVVFGAAIQANFLS 999
L SI+PD+AV +GAA+QA LS
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILS 381
Score = 213 bits (543), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 210/386 (54%), Gaps = 27/386 (6%)
Query: 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQN 2090
+K ++GID GTT S V + ++ E++ + G PS V + D + +G AK
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 60
Query: 2091 IDPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEIS 2142
++P NT+ R I R + S +P+ N G + ++ KS P E+S
Sbjct: 61 MNPTNTVFDAMRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 2143 AQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAA 2202
+ + +K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 2203 IAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
IAY LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD +
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-- 238
Query: 2262 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI----------- 2310
N F+ + K + R ++ L + K + S + + I
Sbjct: 239 ---NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYT 295
Query: 2311 TIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK 2370
+I +F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF
Sbjct: 296 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355
Query: 2371 TTLLT-SIDPDKAVVFGAAIQANFLS 2395
L SI+PD+AV +GAA+QA LS
Sbjct: 356 GKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 213/378 (56%), Gaps = 19/378 (5%)
Query: 639 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 698
++GID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 3 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 61
Query: 699 NTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEISAQIF 750
NT+ KR I R + S +P+ N G + ++ KS P E+S+ +
Sbjct: 62 NTVFDAKRLIGRAFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 751 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 810
+K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAIAY
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 181
Query: 811 LDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIV-- 867
LDK + E ++DLGGGTF +SIL ++G+F+V S GD++LGG+DFD + + +
Sbjct: 182 LDKAVGAERNVLIFDLGGGTFSVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAE 241
Query: 868 -KNAFLKKLSY--KDVNILMIKSREIKELL--SYQSSVKLNVKLSDKKIVNITIDMKQFF 922
K A K +S + V L K L S Q+S++++ L + +I +F
Sbjct: 242 FKRAHAKDISENKRAVRRLATACERAKRTLSSSTQASIEID-SLYEGIDFYTSITRARFE 300
Query: 923 TITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLT-SI 981
+ L T+ KAL DA L I++++LVGGSTR+ I + + +FF L SI
Sbjct: 301 ELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSI 360
Query: 982 DPDKAVVFGAAIQANFLS 999
+PD+AV +GAA+QA LS
Sbjct: 361 NPDEAVAYGAAVQAAILS 378
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 213/378 (56%), Gaps = 19/378 (5%)
Query: 2035 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 2094
++GID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 3 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 61
Query: 2095 NTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEISAQIF 2146
NT+ KR I R + S +P+ N G + ++ KS P E+S+ +
Sbjct: 62 NTVFDAKRLIGRAFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 2147 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 2206
+K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAIAY
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 181
Query: 2207 LDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIV-- 2263
LDK + E ++DLGGGTF +SIL ++G+F+V S GD++LGG+DFD + + +
Sbjct: 182 LDKAVGAERNVLIFDLGGGTFSVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAE 241
Query: 2264 -KNAFLKKLSY--KDVNILMIKSREIKELL--SYQSSVKLNVKLSDKKIVNITIDMKQFF 2318
K A K +S + V L K L S Q+S++++ L + +I +F
Sbjct: 242 FKRAHAKDISENKRAVRRLATACERAKRTLSSSTQASIEID-SLYEGIDFYTSITRARFE 300
Query: 2319 TITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLT-SI 2377
+ L T+ KAL DA L I++++LVGGSTR+ I + + +FF L SI
Sbjct: 301 ELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSI 360
Query: 2378 DPDKAVVFGAAIQANFLS 2395
+PD+AV +GAA+QA LS
Sbjct: 361 NPDEAVAYGAAVQAAILS 378
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 213/378 (56%), Gaps = 19/378 (5%)
Query: 639 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 698
++GID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 3 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 61
Query: 699 NTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEISAQIF 750
NT+ KR I R + S +P+ N G + ++ KS P E+S+ +
Sbjct: 62 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 751 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 810
+K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAIAY
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 181
Query: 811 LDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIV-- 867
LDK + E ++ LGGGTFD+SIL ++G+F+V S GD++LGG+DFD + + +
Sbjct: 182 LDKAVGAERNVLIFSLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAE 241
Query: 868 -KNAFLKKLSY--KDVNILMIKSREIKELL--SYQSSVKLNVKLSDKKIVNITIDMKQFF 922
K A K +S + V L K L S Q+S++++ L + +I +F
Sbjct: 242 FKRAHAKDISENKRAVRRLRTACERAKRTLSSSTQASIEID-SLYEGIDFYTSITRARFE 300
Query: 923 TITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLT-SI 981
+ L T+ KAL DA L I++++LVGGSTR+ I + + +FF L SI
Sbjct: 301 ELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSI 360
Query: 982 DPDKAVVFGAAIQANFLS 999
+PD+AV +GAA+QA LS
Sbjct: 361 NPDEAVAYGAAVQAAILS 378
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 213/378 (56%), Gaps = 19/378 (5%)
Query: 2035 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 2094
++GID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 3 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 61
Query: 2095 NTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEISAQIF 2146
NT+ KR I R + S +P+ N G + ++ KS P E+S+ +
Sbjct: 62 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 2147 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 2206
+K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAIAY
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 181
Query: 2207 LDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIV-- 2263
LDK + E ++ LGGGTFD+SIL ++G+F+V S GD++LGG+DFD + + +
Sbjct: 182 LDKAVGAERNVLIFSLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAE 241
Query: 2264 -KNAFLKKLSY--KDVNILMIKSREIKELL--SYQSSVKLNVKLSDKKIVNITIDMKQFF 2318
K A K +S + V L K L S Q+S++++ L + +I +F
Sbjct: 242 FKRAHAKDISENKRAVRRLRTACERAKRTLSSSTQASIEID-SLYEGIDFYTSITRARFE 300
Query: 2319 TITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLT-SI 2377
+ L T+ KAL DA L I++++LVGGSTR+ I + + +FF L SI
Sbjct: 301 ELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSI 360
Query: 2378 DPDKAVVFGAAIQANFLS 2395
+PD+AV +GAA+QA LS
Sbjct: 361 NPDEAVAYGAAVQAAILS 378
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 220/380 (57%), Gaps = 23/380 (6%)
Query: 639 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 698
+IGID GTT S VA +++ E++ ++ G + PS V + P+ ++ +G AK ++P+
Sbjct: 12 AIGIDLGTTYSCVATYESSV-EIIANEQGNRVTPSFVAFTPEERL-IGDAAKNQAALNPR 69
Query: 699 NTISSIKRFIAR--DLKNINTN--SFPYDFQNKFG--MLHIKTISGIK--SPIEISAQIF 750
NT+ KR I R D +++ + ++P+ + G ++ ++ + K SP EISA +
Sbjct: 70 NTVFDAKRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEISAMVL 129
Query: 751 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 810
+K+IAE + ++ AVITVPAYFND QRQ TK+A ++GLNVLR++NEPT+AAIAY
Sbjct: 130 TKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYG 189
Query: 811 L--DKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 868
L K+ E ++DLGGGTFD+S+L GV+ V S G+++LGG DFD L K
Sbjct: 190 LGAGKSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHF-K 248
Query: 869 NAFLKKLSY------KDVNILMIKSREIKELLS--YQSSVKLNVKLSDKKIVNITIDMKQ 920
F KK + + L + K LS Q++V+++ L D + ++ +
Sbjct: 249 AEFKKKTGLDISDDARALRRLRTAAERAKRTLSSVTQTTVEVD-SLFDGEDFESSLTRAR 307
Query: 921 FFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLT- 979
F + L T+ + L DA ++ I+ V+LVGGSTR+ + + +S+FF L
Sbjct: 308 FEDLNAALFKSTLEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEK 367
Query: 980 SIDPDKAVVFGAAIQANFLS 999
SI+PD+AV +GAA+Q L+
Sbjct: 368 SINPDEAVAYGAAVQGAILT 387
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 220/380 (57%), Gaps = 23/380 (6%)
Query: 2035 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 2094
+IGID GTT S VA +++ E++ ++ G + PS V + P+ ++ +G AK ++P+
Sbjct: 12 AIGIDLGTTYSCVATYESSV-EIIANEQGNRVTPSFVAFTPEERL-IGDAAKNQAALNPR 69
Query: 2095 NTISSIKRFIAR--DLKNINTN--SFPYDFQNKFG--MLHIKTISGIK--SPIEISAQIF 2146
NT+ KR I R D +++ + ++P+ + G ++ ++ + K SP EISA +
Sbjct: 70 NTVFDAKRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEISAMVL 129
Query: 2147 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 2206
+K+IAE + ++ AVITVPAYFND QRQ TK+A ++GLNVLR++NEPT+AAIAY
Sbjct: 130 TKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYG 189
Query: 2207 L--DKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 2264
L K+ E ++DLGGGTFD+S+L GV+ V S G+++LGG DFD L K
Sbjct: 190 LGAGKSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHF-K 248
Query: 2265 NAFLKKLSY------KDVNILMIKSREIKELLS--YQSSVKLNVKLSDKKIVNITIDMKQ 2316
F KK + + L + K LS Q++V+++ L D + ++ +
Sbjct: 249 AEFKKKTGLDISDDARALRRLRTAAERAKRTLSSVTQTTVEVD-SLFDGEDFESSLTRAR 307
Query: 2317 FFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLT- 2375
F + L T+ + L DA ++ I+ V+LVGGSTR+ + + +S+FF L
Sbjct: 308 FEDLNAALFKSTLEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEK 367
Query: 2376 SIDPDKAVVFGAAIQANFLS 2395
SI+PD+AV +GAA+Q L+
Sbjct: 368 SINPDEAVAYGAAVQGAILT 387
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 208/382 (54%), Gaps = 27/382 (7%)
Query: 639 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 698
++GID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 3 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 61
Query: 699 NTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEISAQIF 750
NT+ KR I R + S +P+ N G + ++ KS P E+S+ +
Sbjct: 62 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 751 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 810
+K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++N PT+AAIAY
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAAAIAYG 181
Query: 811 LDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKN 869
LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD + N
Sbjct: 182 LDKAVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-----N 236
Query: 870 AFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TIDM 918
F+ + K + R ++ L + K + S + + I +I
Sbjct: 237 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 296
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF L
Sbjct: 297 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 356
Query: 979 T-SIDPDKAVVFGAAIQANFLS 999
SI+PD+AV +GAA+QA LS
Sbjct: 357 NKSINPDEAVAYGAAVQAAILS 378
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 208/382 (54%), Gaps = 27/382 (7%)
Query: 2035 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 2094
++GID GTT S V + ++ E++ + G PS V + D + +G AK ++P
Sbjct: 3 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPT 61
Query: 2095 NTISSIKRFIARDLKNINTNS----FPYDFQNKFGM--LHIKTISGIKS--PIEISAQIF 2146
NT+ KR I R + S +P+ N G + ++ KS P E+S+ +
Sbjct: 62 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 2147 ITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYK 2206
+K+IAE + + AV+TVPAYFND QRQ TK+A +AGLNVLR++N PT+AAIAY
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAAAIAYG 181
Query: 2207 LDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKN 2265
LDK + E ++DLGGGTFD+SIL ++G+F+V S GD++LGG+DFD + N
Sbjct: 182 LDKAVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV-----N 236
Query: 2266 AFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNI-----------TIDM 2314
F+ + K + R ++ L + K + S + + I +I
Sbjct: 237 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 296
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA L I++++LVGGSTR+ I + + +FF L
Sbjct: 297 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 356
Query: 2375 T-SIDPDKAVVFGAAIQANFLS 2395
SI+PD+AV +GAA+QA LS
Sbjct: 357 NKSINPDEAVAYGAAVQAAILS 378
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And Mg
Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 21/385 (5%)
Query: 636 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 695
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 7 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 65
Query: 696 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 747
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 66 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 125
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 126 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 185
Query: 808 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 866
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 186 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 245
Query: 867 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 918
V+ K+ KD V L K LS + L + L + +I
Sbjct: 246 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 303
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 304 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 363
Query: 979 T-SIDPDKAVVFGAAIQANFLSGNR 1002
SI+PD+AV +GAA+QA L G++
Sbjct: 364 NKSINPDEAVAYGAAVQAAILMGDK 388
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 21/385 (5%)
Query: 2032 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 2091
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 7 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 65
Query: 2092 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 2143
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 66 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 125
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 126 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 185
Query: 2204 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 2262
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 186 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 245
Query: 2263 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 2314
V+ K+ KD V L K LS + L + L + +I
Sbjct: 246 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 303
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 304 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 363
Query: 2375 T-SIDPDKAVVFGAAIQANFLSGNR 2398
SI+PD+AV +GAA+QA L G++
Sbjct: 364 NKSINPDEAVAYGAAVQAAILMGDK 388
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 409
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 21/385 (5%)
Query: 636 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 695
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 25 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 83
Query: 696 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 747
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 84 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 143
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 144 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 203
Query: 808 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 866
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 204 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 263
Query: 867 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 918
V+ K+ KD V L K LS + L + L + +I
Sbjct: 264 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 321
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 322 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 381
Query: 979 T-SIDPDKAVVFGAAIQANFLSGNR 1002
SI+PD+AV +GAA+QA L G++
Sbjct: 382 NKSINPDEAVAYGAAVQAAILMGDK 406
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 21/385 (5%)
Query: 2032 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 2091
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 25 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 83
Query: 2092 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 2143
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 84 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 143
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 144 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 203
Query: 2204 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 2262
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 204 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 263
Query: 2263 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 2314
V+ K+ KD V L K LS + L + L + +I
Sbjct: 264 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 321
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 322 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 381
Query: 2375 T-SIDPDKAVVFGAAIQANFLSGNR 2398
SI+PD+AV +GAA+QA L G++
Sbjct: 382 NKSINPDEAVAYGAAVQAAILMGDK 406
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 21/385 (5%)
Query: 636 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 695
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 6 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 64
Query: 696 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 747
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 65 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 124
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 125 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 184
Query: 808 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 866
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 185 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 244
Query: 867 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 918
V+ K+ KD V L K LS + L + L + +I
Sbjct: 245 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 302
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 303 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 362
Query: 979 T-SIDPDKAVVFGAAIQANFLSGNR 1002
SI+PD+AV +GAA+QA L G++
Sbjct: 363 NKSINPDEAVAYGAAVQAAILMGDK 387
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 21/385 (5%)
Query: 2032 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 2091
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 6 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 64
Query: 2092 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 2143
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 65 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 124
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 125 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 184
Query: 2204 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 2262
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 185 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 244
Query: 2263 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 2314
V+ K+ KD V L K LS + L + L + +I
Sbjct: 245 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 302
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 303 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 362
Query: 2375 T-SIDPDKAVVFGAAIQANFLSGNR 2398
SI+PD+AV +GAA+QA L G++
Sbjct: 363 NKSINPDEAVAYGAAVQAAILMGDK 387
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 21/385 (5%)
Query: 636 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 695
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 6 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 64
Query: 696 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 747
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 65 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 124
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 125 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 184
Query: 808 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 866
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 185 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 244
Query: 867 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 918
V+ K+ KD V L K LS + L + L + +I
Sbjct: 245 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 302
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 303 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 362
Query: 979 T-SIDPDKAVVFGAAIQANFLSGNR 1002
SI+PD+AV +GAA+QA L G++
Sbjct: 363 NKSINPDEAVAYGAAVQAAILMGDK 387
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 21/385 (5%)
Query: 2032 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 2091
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 6 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 64
Query: 2092 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 2143
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 65 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 124
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 125 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 184
Query: 2204 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 2262
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 185 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 244
Query: 2263 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 2314
V+ K+ KD V L K LS + L + L + +I
Sbjct: 245 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 302
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 303 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 362
Query: 2375 T-SIDPDKAVVFGAAIQANFLSGNR 2398
SI+PD+AV +GAA+QA L G++
Sbjct: 363 NKSINPDEAVAYGAAVQAAILMGDK 387
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 207/383 (54%), Gaps = 21/383 (5%)
Query: 636 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 695
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 3 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 61
Query: 696 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 747
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 122 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 808 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 866
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 182 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 241
Query: 867 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 918
V+ K+ KD V L K LS + L + L + +I
Sbjct: 242 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 979 T-SIDPDKAVVFGAAIQANFLSG 1000
SI+PD+AV +GAA+QA L G
Sbjct: 360 NKSINPDEAVAYGAAVQAAILMG 382
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 207/383 (54%), Gaps = 21/383 (5%)
Query: 2032 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 2091
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 3 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 61
Query: 2092 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 2143
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 122 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 2204 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 2262
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 182 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 241
Query: 2263 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 2314
V+ K+ KD V L K LS + L + L + +I
Sbjct: 242 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 2375 T-SIDPDKAVVFGAAIQANFLSG 2396
SI+PD+AV +GAA+QA L G
Sbjct: 360 NKSINPDEAVAYGAAVQAAILMG 382
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 207/383 (54%), Gaps = 21/383 (5%)
Query: 636 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 695
K +IGID GTT S + + ++ E++ + G PS V + D + +G AK +
Sbjct: 3 KAAAIGIDLGTTYSCIGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 61
Query: 696 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 747
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 122 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 808 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 866
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 182 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 241
Query: 867 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 918
V+ K+ KD V L K LS + L + L + +I
Sbjct: 242 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 979 T-SIDPDKAVVFGAAIQANFLSG 1000
SI+PD+AV +GAA+QA L G
Sbjct: 360 NKSINPDEAVAYGAAVQAAILMG 382
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 207/383 (54%), Gaps = 21/383 (5%)
Query: 2032 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 2091
K +IGID GTT S + + ++ E++ + G PS V + D + +G AK +
Sbjct: 3 KAAAIGIDLGTTYSCIGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 61
Query: 2092 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 2143
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 122 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 2204 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 2262
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 182 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 241
Query: 2263 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 2314
V+ K+ KD V L K LS + L + L + +I
Sbjct: 242 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 2375 T-SIDPDKAVVFGAAIQANFLSG 2396
SI+PD+AV +GAA+QA L G
Sbjct: 360 NKSINPDEAVAYGAAVQAAILMG 382
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 207/383 (54%), Gaps = 21/383 (5%)
Query: 636 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 695
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 1 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 59
Query: 696 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 747
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 60 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 119
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 120 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 179
Query: 808 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 866
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 180 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 239
Query: 867 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 918
V+ K+ KD V L K LS + L + L + +I
Sbjct: 240 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 297
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 298 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 357
Query: 979 T-SIDPDKAVVFGAAIQANFLSG 1000
SI+PD+AV +GAA+QA L G
Sbjct: 358 NKSINPDEAVAYGAAVQAAILMG 380
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 207/383 (54%), Gaps = 21/383 (5%)
Query: 2032 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 2091
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 1 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 59
Query: 2092 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 2143
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 60 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 119
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+ +K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 120 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 179
Query: 2204 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 2262
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 180 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 239
Query: 2263 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 2314
V+ K+ KD V L K LS + L + L + +I
Sbjct: 240 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 297
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 298 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 357
Query: 2375 T-SIDPDKAVVFGAAIQANFLSG 2396
SI+PD+AV +GAA+QA L G
Sbjct: 358 NKSINPDEAVAYGAAVQAAILMG 380
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With Adp
And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With Adp
And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 208 bits (530), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 211/384 (54%), Gaps = 27/384 (7%)
Query: 639 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 698
+IGID GTT S V + RN+ +++ + G PS V + ++ +G AK +P+
Sbjct: 21 AIGIDLGTTYSCVGVWRNDTVDIVPNDQGNRTTPSYVAFTETERL-IGDAAKNQVARNPE 79
Query: 699 NTISSIKRFIAR--DLKNINTNSFPYDFQNKFGMLHIKTIS----GIKSPI---EISAQI 749
NT+ KR I R D + + ++ + F+ G IS G K EISA +
Sbjct: 80 NTVFDAKRLIGRKFDDQAVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISAMV 139
Query: 750 FITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAY 809
+K+I+E + +I AV+TVPAYFND QRQ TK+A +AGLNV+R++NEPT+AAIAY
Sbjct: 140 LQKMKEISEAYLGRQIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAY 199
Query: 810 KLD-KNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 868
LD K E ++DLGGGTFD+S+L ++G+F+V + GD++LGG+DFD L + V+
Sbjct: 200 GLDKKGTGERNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVEFCVQ 259
Query: 869 NAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIV-----------NITID 917
+ F +K D L +R ++ L + K + S + + ++ I
Sbjct: 260 D-FKRKNRGMD---LTTNARALRRLRTQCERAKRTLSSSTQATIELDSLYEGIDYSVAIS 315
Query: 918 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK-TT 976
+F + T+ K L DA + + +++V+LVGGSTR+ + + FF
Sbjct: 316 RARFEELCADYFRATLAPVEKVLKDAGMDKRSVHDVVLVGGSTRIPKVQALIQEFFNGKE 375
Query: 977 LLTSIDPDKAVVFGAAIQANFLSG 1000
+I+PD+AV +GAA+QA L+G
Sbjct: 376 PCKAINPDEAVAYGAAVQAAILNG 399
Score = 208 bits (530), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 211/384 (54%), Gaps = 27/384 (7%)
Query: 2035 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPK 2094
+IGID GTT S V + RN+ +++ + G PS V + ++ +G AK +P+
Sbjct: 21 AIGIDLGTTYSCVGVWRNDTVDIVPNDQGNRTTPSYVAFTETERL-IGDAAKNQVARNPE 79
Query: 2095 NTISSIKRFIAR--DLKNINTNSFPYDFQNKFGMLHIKTIS----GIKSPI---EISAQI 2145
NT+ KR I R D + + ++ + F+ G IS G K EISA +
Sbjct: 80 NTVFDAKRLIGRKFDDQAVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISAMV 139
Query: 2146 FITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAY 2205
+K+I+E + +I AV+TVPAYFND QRQ TK+A +AGLNV+R++NEPT+AAIAY
Sbjct: 140 LQKMKEISEAYLGRQIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAY 199
Query: 2206 KLD-KNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 2264
LD K E ++DLGGGTFD+S+L ++G+F+V + GD++LGG+DFD L + V+
Sbjct: 200 GLDKKGTGERNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVEFCVQ 259
Query: 2265 NAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIV-----------NITID 2313
+ F +K D L +R ++ L + K + S + + ++ I
Sbjct: 260 D-FKRKNRGMD---LTTNARALRRLRTQCERAKRTLSSSTQATIELDSLYEGIDYSVAIS 315
Query: 2314 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK-TT 2372
+F + T+ K L DA + + +++V+LVGGSTR+ + + FF
Sbjct: 316 RARFEELCADYFRATLAPVEKVLKDAGMDKRSVHDVVLVGGSTRIPKVQALIQEFFNGKE 375
Query: 2373 LLTSIDPDKAVVFGAAIQANFLSG 2396
+I+PD+AV +GAA+QA L+G
Sbjct: 376 PCKAINPDEAVAYGAAVQAAILNG 399
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 208 bits (529), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 206/383 (53%), Gaps = 21/383 (5%)
Query: 636 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 695
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 3 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 61
Query: 696 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 747
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDXKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+ K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 122 XVLTKXKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 808 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 866
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 182 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 241
Query: 867 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 918
V+ K+ KD V L K LS + L + L + +I
Sbjct: 242 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 919 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 978
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 979 T-SIDPDKAVVFGAAIQANFLSG 1000
SI+PD+AV +GAA+QA L G
Sbjct: 360 NKSINPDEAVAYGAAVQAAILXG 382
Score = 208 bits (529), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 206/383 (53%), Gaps = 21/383 (5%)
Query: 2032 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI 2091
K +IGID GTT S V + ++ E++ + G PS V + D + +G AK +
Sbjct: 3 KAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 61
Query: 2092 DPKNTISSIKRFIARDLKNINTNS----FPYDFQNKFGMLHIKTISGIKS----PIEISA 2143
+P+NT+ KR I R + S +P+ N ++ ++ P EIS+
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDXKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+ K+IAE + + AVITVPAYFND QRQ TK+A +AGLNVLR++NEPT+AAI
Sbjct: 122 XVLTKXKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 2204 AYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 2262
AY LD+ E ++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L +
Sbjct: 182 AYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 241
Query: 2263 VKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDM 2314
V+ K+ KD V L K LS + L + L + +I
Sbjct: 242 VEE--FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 2315 KQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 2374
+F + L T+ KAL DA L I++++LVGGSTR+ + + + +FF L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 2375 T-SIDPDKAVVFGAAIQANFLSG 2396
SI+PD+AV +GAA+QA L G
Sbjct: 360 NKSINPDEAVAYGAAVQAAILXG 382
>pdb|3A9X|A Chain A, Crystal Structure Of Rat Selenocysteine Lyase
pdb|3A9X|B Chain B, Crystal Structure Of Rat Selenocysteine Lyase
pdb|3A9Y|A Chain A, Crystal Structure Of Rat Selenocysteine Lyase In Complex
With L-Cysteine
pdb|3A9Y|B Chain B, Crystal Structure Of Rat Selenocysteine Lyase In Complex
With L-Cysteine
pdb|3A9Z|A Chain A, Crystal Structure Of Ras Selenocysteine Lyase In Complex
With Selenopropionate
pdb|3A9Z|B Chain B, Crystal Structure Of Ras Selenocysteine Lyase In Complex
With Selenopropionate
Length = 432
Score = 183 bits (465), Expect = 9e-46, Method: Composition-based stats.
Identities = 132/406 (32%), Positives = 212/406 (52%), Gaps = 44/406 (10%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE 60
MDY+ATTP++P V+ + ++ +GNP+S +++ G A+ I AR +A++I P++
Sbjct: 22 MDYNATTPLEPEVIQAVTEAMKEAWGNPSS-SYVAGRKAKDIINTARASLAKMIGGKPQD 80
Query: 61 IIWTSGATESNNLAIKGAAHFYKK----RGK-------------HIITVQTEHKSVLDSI 103
II+TSG TESNNL I + + +G+ H IT EH S+ +
Sbjct: 81 IIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPL 140
Query: 104 RKL-ENDGFRVTYLK-PKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGEL 161
L E+ VT++ K NG + + + + T LV++ML NNE GVI PI EI
Sbjct: 141 EHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRR 200
Query: 162 CRSKG----------VIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR 211
++ V+ H DAAQA+GK +++++ VD ++ HK YGP+ IGALY+R
Sbjct: 201 IKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVR 259
Query: 212 RNPR-TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRIL--FLQ 266
+ T + + GGG E R GT T I G+G+A L E E R + +L+
Sbjct: 260 GVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLE 319
Query: 267 KRLYNGLMESIEEIYINGDMN--NRIPHNLNISF--NFIEGESLLMAIKDIAVSSGSACT 322
+RL E + I++N R+P+ N S + + G +L + + S G++C
Sbjct: 320 ERLE---AEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCH 376
Query: 323 SASLE-PSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367
S + PS VL + G ++A +++R ++GR TT E+D ++ LK
Sbjct: 377 SDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLK 422
Score = 178 bits (451), Expect = 4e-44, Method: Composition-based stats.
Identities = 134/420 (31%), Positives = 215/420 (51%), Gaps = 46/420 (10%)
Query: 1385 SSGIVMRPYTNIVFKD--ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKA 1442
+ G V P V+ D ATTP++P V+ + ++ +GNP+S +++ G A+ I A
Sbjct: 8 ARGSVESPPNRKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSS-SYVAGRKAKDIINTA 66
Query: 1443 RNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK----RGK-------------HI 1485
R +A++I P++II+TSG TESNNL I + + +G+ H
Sbjct: 67 RASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHF 126
Query: 1486 ITVQTEHKSVLDSIRKL-ENDGFRVTYLK-PKNNGLITLSQLEEKICSDTILVSVMLVNN 1543
IT EH S+ + L E+ VT++ K NG + + + + T LV++ML NN
Sbjct: 127 ITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANN 186
Query: 1544 EIGVIQPILEIGELCRSKG----------VIFHCDAAQAVGKIDINIQNYKVDLMSFSAH 1593
E GVI PI EI ++ V+ H DAAQA+GK +++++ VD ++ H
Sbjct: 187 ETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGH 246
Query: 1594 KIYGPKGIGALYIRRNPR-TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RIE 1650
K YGP+ IGALY+R + T + + GGG E R GT T I G+G+A L E
Sbjct: 247 KFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCE 305
Query: 1651 MKEELKRIL--FLQKRLYNGLMESIEEIYINGDMN--NRIPHNLNISF--NFIEGESLLM 1704
E R + +L++RL E + I++N R+P+ N S + + G +L
Sbjct: 306 TYEAHMRDIRDYLEERLE---AEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLA 362
Query: 1705 AIKDIAVSSGSACTSASLE-PSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 1763
+ + S G++C S + PS VL + G ++A +++R ++GR TT E+D ++ LK
Sbjct: 363 QCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLK 422
>pdb|3GZC|A Chain A, Structure Of Human Selenocysteine Lyase
pdb|3GZC|B Chain B, Structure Of Human Selenocysteine Lyase
pdb|3GZD|C Chain C, Human Selenocysteine Lyase, P1 Crystal Form
Length = 440
Score = 180 bits (456), Expect = 1e-44, Method: Composition-based stats.
Identities = 129/406 (31%), Positives = 203/406 (50%), Gaps = 43/406 (10%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE 60
MDY+ATTP++P V+ M + +GNP+S + G A+ I AR +A++I P++
Sbjct: 29 MDYNATTPLEPEVIQAMTKAMWEAWGNPSS-PYSAGRKAKDIINAARESLAKMIGGKPQD 87
Query: 61 IIWTSGATESNNLAIKGAA-HFY----------------KKRGKHIITVQTEHKSVLDSI 103
II+TSG TESNNL I HF+ K H IT EH S+ +
Sbjct: 88 IIFTSGGTESNNLVIHSVVKHFHANQTSKGHTGGHHSPVKGAKPHFITSSVEHDSIRLPL 147
Query: 104 RKLENDGFRVTYLKP--KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGEL 161
L + P K +G + + + T LV++ML NNE G++ P+ EI +
Sbjct: 148 EHLVEEQVAAVTFVPVSKVSGQTEVDDILAAVRPTTRLVTIMLANNETGIVMPVPEISQR 207
Query: 162 CRSKG----------VIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR 211
++ ++ H DAAQA+GK +++++ VD ++ HK YGP+ IGALYIR
Sbjct: 208 IKALNQERVAAGLPPILVHTDAAQALGKQRVDVEDLGVDFLTIVGHKFYGPR-IGALYIR 266
Query: 212 -RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRIL--FLQ 266
T + + GGG E R GT T I G+G+A L E E R + +L+
Sbjct: 267 GLGEFTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLE 326
Query: 267 KRLYNGLMESIEEIYINGDM--NNRIPHNLNISFN--FIEGESLLMAIKDIAVSSGSACT 322
+RL + + I++N R+P+ N S ++G +L + + S G+AC
Sbjct: 327 ERLEAEFGQ--KRIHLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRVLMASVGAACH 384
Query: 323 S-ASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367
S +PS VL + G ++A +++R ++GR TT E+D ++ LK
Sbjct: 385 SDHGDQPSPVLLSYGVPFDVARNALRLSVGRSTTRAEVDLVVQDLK 430
Score = 172 bits (437), Expect = 2e-42, Method: Composition-based stats.
Identities = 126/403 (31%), Positives = 200/403 (49%), Gaps = 43/403 (10%)
Query: 1400 DATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIW 1459
+ATTP++P V+ M + +GNP+S + G A+ I AR +A++I P++II+
Sbjct: 32 NATTPLEPEVIQAMTKAMWEAWGNPSS-PYSAGRKAKDIINAARESLAKMIGGKPQDIIF 90
Query: 1460 TSGATESNNLAIKGAA-HFY----------------KKRGKHIITVQTEHKSVLDSIRKL 1502
TSG TESNNL I HF+ K H IT EH S+ + L
Sbjct: 91 TSGGTESNNLVIHSVVKHFHANQTSKGHTGGHHSPVKGAKPHFITSSVEHDSIRLPLEHL 150
Query: 1503 ENDGFRVTYLKP--KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS 1560
+ P K +G + + + T LV++ML NNE G++ P+ EI + ++
Sbjct: 151 VEEQVAAVTFVPVSKVSGQTEVDDILAAVRPTTRLVTIMLANNETGIVMPVPEISQRIKA 210
Query: 1561 KG----------VIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR-RN 1609
++ H DAAQA+GK +++++ VD ++ HK YGP+ IGALYIR
Sbjct: 211 LNQERVAAGLPPILVHTDAAQALGKQRVDVEDLGVDFLTIVGHKFYGPR-IGALYIRGLG 269
Query: 1610 PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRIL--FLQKRL 1665
T + + GGG E R GT T I G+G+A L E E R + +L++RL
Sbjct: 270 EFTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLEERL 329
Query: 1666 YNGLMESIEEIYINGDM--NNRIPHNLNISFN--FIEGESLLMAIKDIAVSSGSACTS-A 1720
+ + I++N R+P+ N S ++G +L + + S G+AC S
Sbjct: 330 EAEFGQ--KRIHLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRVLMASVGAACHSDH 387
Query: 1721 SLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 1763
+PS VL + G ++A +++R ++GR TT E+D ++ LK
Sbjct: 388 GDQPSPVLLSYGVPFDVARNALRLSVGRSTTRAEVDLVVQDLK 430
>pdb|2L4X|A Chain A, Solution Structure Of Apo-Iscu(Wt)
Length = 128
Score = 177 bits (449), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 81/97 (83%), Positives = 89/97 (91%)
Query: 373 MSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKT 432
M+YSEKV+DHYENPRNVG F+ ND VG+GMVGAPACGDVMKLQIKVN G+I DA+FKT
Sbjct: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60
Query: 433 YGCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 469
YGCGSAIASSSLVTEWVKGK+LDEA +IKNTDIAEEL
Sbjct: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL 97
Score = 177 bits (449), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 81/97 (83%), Positives = 89/97 (91%)
Query: 1769 MSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKT 1828
M+YSEKV+DHYENPRNVG F+ ND VG+GMVGAPACGDVMKLQIKVN G+I DA+FKT
Sbjct: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60
Query: 1829 YGCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 1865
YGCGSAIASSSLVTEWVKGK+LDEA +IKNTDIAEEL
Sbjct: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL 97
>pdb|3GZD|A Chain A, Human Selenocysteine Lyase, P1 Crystal Form
pdb|3GZD|B Chain B, Human Selenocysteine Lyase, P1 Crystal Form
pdb|3GZD|D Chain D, Human Selenocysteine Lyase, P1 Crystal Form
Length = 440
Score = 175 bits (444), Expect = 2e-43, Method: Composition-based stats.
Identities = 128/406 (31%), Positives = 202/406 (49%), Gaps = 43/406 (10%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE 60
MDY+ATTP++P V+ M + +GNP+S + G A+ I AR +A++I P++
Sbjct: 29 MDYNATTPLEPEVIQAMTKAMWEAWGNPSS-PYSAGRKAKDIINAARESLAKMIGGKPQD 87
Query: 61 IIWTSGATESNNLAIKGAA-HFY----------------KKRGKHIITVQTEHKSVLDSI 103
II+TSG TESNNL I HF+ K H IT EH S+ +
Sbjct: 88 IIFTSGGTESNNLVIHSVVKHFHANQTSKGHTGGHHSPVKGAKPHFITSSVEHDSIRLPL 147
Query: 104 RKLENDGFRVTYLKP--KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGEL 161
L + P K +G + + + T LV++ML NNE G++ P+ EI +
Sbjct: 148 EHLVEEQVAAVTFVPVSKVSGQTEVDDILAAVRPTTRLVTIMLANNETGIVMPVPEISQR 207
Query: 162 CRSKG----------VIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR 211
++ ++ H DAAQA+GK +++++ VD ++ HK YGP+ IGALYIR
Sbjct: 208 IKALNQERVAAGLPPILVHTDAAQALGKQRVDVEDLGVDFLTIVGHKFYGPR-IGALYIR 266
Query: 212 -RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRIL--FLQ 266
T + + GGG E R GT T I G+G+A L E E R + +L+
Sbjct: 267 GLGEFTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLE 326
Query: 267 KRLYNGLMESIEEIYINGDM--NNRIPHNLNISFN--FIEGESLLMAIKDIAVSSGSACT 322
+RL + + I++N R+P+ N S ++G +L + + S G+A
Sbjct: 327 ERLEAEFGQ--KRIHLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRVLMASVGAAXH 384
Query: 323 S-ASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367
S +PS VL + G ++A +++R ++GR TT E+D ++ LK
Sbjct: 385 SDHGDQPSPVLLSYGVPFDVARNALRLSVGRSTTRAEVDLVVQDLK 430
Score = 168 bits (426), Expect = 4e-41, Method: Composition-based stats.
Identities = 125/403 (31%), Positives = 199/403 (49%), Gaps = 43/403 (10%)
Query: 1400 DATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIW 1459
+ATTP++P V+ M + +GNP+S + G A+ I AR +A++I P++II+
Sbjct: 32 NATTPLEPEVIQAMTKAMWEAWGNPSS-PYSAGRKAKDIINAARESLAKMIGGKPQDIIF 90
Query: 1460 TSGATESNNLAIKGAA-HFY----------------KKRGKHIITVQTEHKSVLDSIRKL 1502
TSG TESNNL I HF+ K H IT EH S+ + L
Sbjct: 91 TSGGTESNNLVIHSVVKHFHANQTSKGHTGGHHSPVKGAKPHFITSSVEHDSIRLPLEHL 150
Query: 1503 ENDGFRVTYLKP--KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS 1560
+ P K +G + + + T LV++ML NNE G++ P+ EI + ++
Sbjct: 151 VEEQVAAVTFVPVSKVSGQTEVDDILAAVRPTTRLVTIMLANNETGIVMPVPEISQRIKA 210
Query: 1561 KG----------VIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR-RN 1609
++ H DAAQA+GK +++++ VD ++ HK YGP+ IGALYIR
Sbjct: 211 LNQERVAAGLPPILVHTDAAQALGKQRVDVEDLGVDFLTIVGHKFYGPR-IGALYIRGLG 269
Query: 1610 PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRIL--FLQKRL 1665
T + + GGG E R GT T I G+G+A L E E R + +L++RL
Sbjct: 270 EFTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLEERL 329
Query: 1666 YNGLMESIEEIYINGDM--NNRIPHNLNISFN--FIEGESLLMAIKDIAVSSGSACTS-A 1720
+ + I++N R+P+ N S ++G +L + + S G+A S
Sbjct: 330 EAEFGQ--KRIHLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRVLMASVGAAXHSDH 387
Query: 1721 SLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 1763
+PS VL + G ++A +++R ++GR TT E+D ++ LK
Sbjct: 388 GDQPSPVLLSYGVPFDVARNALRLSVGRSTTRAEVDLVVQDLK 430
>pdb|3LVL|A Chain A, Crystal Structure Of E.Coli Iscs-Iscu Complex
Length = 129
Score = 174 bits (442), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/96 (83%), Positives = 88/96 (91%)
Query: 374 SYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTY 433
+YSEKV+DHYENPRNVG F+ ND VG+GMVGAPACGDVMKLQIKVN G+I DA+FKTY
Sbjct: 3 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 62
Query: 434 GCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 469
GCGSAIASSSLVTEWVKGK+LDEA +IKNTDIAEEL
Sbjct: 63 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL 98
Score = 174 bits (442), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/96 (83%), Positives = 88/96 (91%)
Query: 1770 SYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTY 1829
+YSEKV+DHYENPRNVG F+ ND VG+GMVGAPACGDVMKLQIKVN G+I DA+FKTY
Sbjct: 3 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 62
Query: 1830 GCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 1865
GCGSAIASSSLVTEWVKGK+LDEA +IKNTDIAEEL
Sbjct: 63 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL 98
>pdb|2KQK|A Chain A, Solution Structure Of Apo-Iscu(D39a)
Length = 128
Score = 174 bits (441), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 80/97 (82%), Positives = 88/97 (90%)
Query: 373 MSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKT 432
M+YSEKV+DHYENPRNVG F+ ND VG+GMVGAPACG VMKLQIKVN G+I DA+FKT
Sbjct: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGAVMKLQIKVNDEGIIEDARFKT 60
Query: 433 YGCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 469
YGCGSAIASSSLVTEWVKGK+LDEA +IKNTDIAEEL
Sbjct: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL 97
Score = 174 bits (441), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 80/97 (82%), Positives = 88/97 (90%)
Query: 1769 MSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKT 1828
M+YSEKV+DHYENPRNVG F+ ND VG+GMVGAPACG VMKLQIKVN G+I DA+FKT
Sbjct: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGAVMKLQIKVNDEGIIEDARFKT 60
Query: 1829 YGCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 1865
YGCGSAIASSSLVTEWVKGK+LDEA +IKNTDIAEEL
Sbjct: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL 97
>pdb|1Q48|A Chain A, Solution Nmr Structure Of The Haemophilus Influenzae Iron-
Sulfur Cluster Assembly Protein U (Iscu) With Zinc Bound
At The Active Site. Northeast Structural Genomics
Consortium Target Ir24. This Protein Is Not Apo, It Is A
Model Without Zinc Binding Constraints.
pdb|1R9P|A Chain A, Solution Nmr Structure Of The Haemophilus Influenzae Iron-
Sulfur Cluster Assembly Protein U (Iscu) With Zinc Bound
At The Active Site. Northeast Structural Genomics
Consortium Target Ir24
Length = 134
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/97 (79%), Positives = 89/97 (91%)
Query: 373 MSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKT 432
M+YSEKV+DHYENPRNVG +K D+ VGTGMVGAPACGDVM+LQIKV+ NG+I DAKFKT
Sbjct: 1 MAYSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQIKVDDNGIIEDAKFKT 60
Query: 433 YGCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 469
YGCGSAIASSSL+TEWVKGK+L+EA +IKN+ IAEEL
Sbjct: 61 YGCGSAIASSSLITEWVKGKSLEEAGAIKNSQIAEEL 97
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/97 (79%), Positives = 89/97 (91%)
Query: 1769 MSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKT 1828
M+YSEKV+DHYENPRNVG +K D+ VGTGMVGAPACGDVM+LQIKV+ NG+I DAKFKT
Sbjct: 1 MAYSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQIKVDDNGIIEDAKFKT 60
Query: 1829 YGCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 1865
YGCGSAIASSSL+TEWVKGK+L+EA +IKN+ IAEEL
Sbjct: 61 YGCGSAIASSSLITEWVKGKSLEEAGAIKNSQIAEEL 97
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu
Recognition Peptide Elppvkihc
Length = 227
Score = 154 bits (390), Expect = 4e-37, Method: Composition-based stats.
Identities = 74/121 (61%), Positives = 95/121 (78%)
Query: 1011 LDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNC 1070
+DVIPLSLG+ET+GGLVEK+I RNTTIP + + +FTTFKD QTA++I V+QGE ELV++C
Sbjct: 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDC 60
Query: 1071 QVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDE 1130
+ LA F LR IP +PAG A I+VT+QVDADGLLS+ A EK +G + I +KP Y + E
Sbjct: 61 RSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE 120
Query: 1131 I 1131
I
Sbjct: 121 I 121
Score = 154 bits (390), Expect = 4e-37, Method: Composition-based stats.
Identities = 74/121 (61%), Positives = 95/121 (78%)
Query: 2407 LDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNC 2466
+DVIPLSLG+ET+GGLVEK+I RNTTIP + + +FTTFKD QTA++I V+QGE ELV++C
Sbjct: 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDC 60
Query: 2467 QVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDE 2526
+ LA F LR IP +PAG A I+VT+QVDADGLLS+ A EK +G + I +KP Y + E
Sbjct: 61 RSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE 120
Query: 2527 I 2527
I
Sbjct: 121 I 121
>pdb|1WFZ|A Chain A, Solution Structure Of Iron-Sulfur Cluster Protein U (Iscu)
Length = 130
Score = 140 bits (354), Expect = 7e-33, Method: Composition-based stats.
Identities = 64/86 (74%), Positives = 76/86 (88%)
Query: 384 ENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSS 443
ENPRNVG +K VGTG+VGAPACGDVMKLQI+V++ G I DA+FKT+GCGSAIASSS
Sbjct: 8 ENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSS 67
Query: 444 LVTEWVKGKTLDEAMSIKNTDIAEEL 469
L TEWVKGKT++EA++IKNTDIA+EL
Sbjct: 68 LATEWVKGKTVEEALTIKNTDIAKEL 93
Score = 140 bits (354), Expect = 7e-33, Method: Composition-based stats.
Identities = 64/86 (74%), Positives = 76/86 (88%)
Query: 1780 ENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSS 1839
ENPRNVG +K VGTG+VGAPACGDVMKLQI+V++ G I DA+FKT+GCGSAIASSS
Sbjct: 8 ENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSS 67
Query: 1840 LVTEWVKGKTLDEAMSIKNTDIAEEL 1865
L TEWVKGKT++EA++IKNTDIA+EL
Sbjct: 68 LATEWVKGKTVEEALTIKNTDIAKEL 93
>pdb|4IXO|A Chain A, X-ray Structure Of Nifs-like Protein From Rickettsia
Africae Esf-5
pdb|4IXO|B Chain B, X-ray Structure Of Nifs-like Protein From Rickettsia
Africae Esf-5
Length = 380
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 185/373 (49%), Gaps = 24/373 (6%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQL--IYADP 58
+D++ATT IDPRV + +I + + NP+S H G A+ IE R ++A I
Sbjct: 12 LDHNATTFIDPRVKEFIISLMDKEL-NPSSA-HSSGRFAKNLIETVRAQIATALGITLSS 69
Query: 59 RE--IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYL 116
RE I +TS TE NNL +K +FY I EH S+ + I N + +
Sbjct: 70 REYDITFTSSGTEGNNLIMK---NFYDGD---IFISAIEHLSIYNHINYAPN----IKVI 119
Query: 117 KPKNNGLITLSQLEEKICSDTI---LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDA 173
GL+ L LEE + LVS+++ NNE GV+Q I EIG++ + FH D
Sbjct: 120 SVNTQGLVDLEHLEELLAQSNTSKKLVSIIMANNESGVLQDIAEIGKITKKYEAKFHSDL 179
Query: 174 AQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRS 233
Q G+I INI+ +D + S H I G +G AL N +I I GGG E +RS
Sbjct: 180 VQGFGRIPINIKALGLDFATISGHXIGGGQGGAALISSSN--FQITPMIIGGGQEKSVRS 237
Query: 234 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHN 293
GT I G G A L + E +I LQ+ L L + + I + R+P+
Sbjct: 238 GTENVLAIAGFGLASALRTDNISENYIKIKKLQENLEKKL-KKYPNVNIVSNNVARLPNT 296
Query: 294 LNISFNFIEGESLLMA--IKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG 351
I+ + ++ L+ + +I VSSGSAC+S + S+VL +G +E A SSIR ++
Sbjct: 297 TLITIPNTDAQAKLIGFDLHNICVSSGSACSSGKISKSHVLTNMGVGEEEAKSSIRISLS 356
Query: 352 RFTTEKEIDFTIK 364
T ++I+ I+
Sbjct: 357 HTNTVRDIEAFIE 369
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 182/370 (49%), Gaps = 24/370 (6%)
Query: 1400 DATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQL--IYADPRE- 1456
+ATT IDPRV + +I + + NP+S H G A+ IE R ++A I RE
Sbjct: 15 NATTFIDPRVKEFIISLMDKEL-NPSSA-HSSGRFAKNLIETVRAQIATALGITLSSREY 72
Query: 1457 -IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK 1515
I +TS TE NNL +K +FY I EH S+ + I N + +
Sbjct: 73 DITFTSSGTEGNNLIMK---NFYDGD---IFISAIEHLSIYNHINYAPN----IKVISVN 122
Query: 1516 NNGLITLSQLEEKICSDTI---LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA 1572
GL+ L LEE + LVS+++ NNE GV+Q I EIG++ + FH D Q
Sbjct: 123 TQGLVDLEHLEELLAQSNTSKKLVSIIMANNESGVLQDIAEIGKITKKYEAKFHSDLVQG 182
Query: 1573 VGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 1632
G+I INI+ +D + S H I G +G AL N +I I GGG E +RSGT
Sbjct: 183 FGRIPINIKALGLDFATISGHXIGGGQGGAALISSSN--FQITPMIIGGGQEKSVRSGTE 240
Query: 1633 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNI 1692
I G G A L + E +I LQ+ L L + + I + R+P+ I
Sbjct: 241 NVLAIAGFGLASALRTDNISENYIKIKKLQENLEKKL-KKYPNVNIVSNNVARLPNTTLI 299
Query: 1693 SFNFIEGESLLMA--IKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFT 1750
+ + ++ L+ + +I VSSGSAC+S + S+VL +G +E A SSIR ++
Sbjct: 300 TIPNTDAQAKLIGFDLHNICVSSGSACSSGKISKSHVLTNMGVGEEEAKSSIRISLSHTN 359
Query: 1751 TEKEIDFTIK 1760
T ++I+ I+
Sbjct: 360 TVRDIEAFIE 369
>pdb|1KON|A Chain A, Crystal Structure Of E.Coli Yebc
Length = 249
Score = 137 bits (346), Expect = 6e-32, Method: Composition-based stats.
Identities = 77/220 (35%), Positives = 125/220 (56%), Gaps = 4/220 (1%)
Query: 1195 WGLEENSRLSFDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDANIPKNNI 1253
W + + + DAKRGKI T+I+REL A G +PD N +LR A++KAL N+ ++ +
Sbjct: 10 WANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNNMTRDTL 69
Query: 1254 FRAXXXXXXXXXXXXXXXXXVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFNKNGGNL 1313
RA + YEGY G AI+++C+++NR RTV+ +R+ F+K GGNL
Sbjct: 70 NRAIARGVGGDDDANMET--IIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNL 127
Query: 1314 SKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPSKFIEIK 1373
+GSV ++F G + F ++T+++ ALE GAED + D I + T+ + +++
Sbjct: 128 GTDGSVAYLFSKKGVISF-EKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVR 186
Query: 1374 NSLEMTGFKAESSGIVMRPYTNIVFKDATTPIDPRVVDKM 1413
++LE G KA+S+ + M P T T P R++D +
Sbjct: 187 DALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDML 226
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 668
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 187/377 (49%), Gaps = 22/377 (5%)
Query: 637 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNID 696
G+D G NS++A+ RN +++ ++ PS+V + P + Y+G+ K Q +
Sbjct: 4 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNR-YLGETGKNKQTSN 62
Query: 697 PKNTISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISG---------IKSPIEISA 747
KNT++++KR I D + + F +K L K + S +++A
Sbjct: 63 IKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAA 122
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+K + I I VP ++ + QR +AA++AGLN +R++N+ T+A +
Sbjct: 123 MFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGV 182
Query: 808 AYKLDK-NIFEG-----IFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYC 861
+Y + K ++ EG I A D+G ++ SI+ FK G KVL D + GG DFD
Sbjct: 183 SYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 242
Query: 862 LFSWIVKNAFLK-----KLSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNIT 915
+ K + + K N ++ + ++K++LS ++ +V+ + + V+
Sbjct: 243 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQ 302
Query: 916 IDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 975
+ ++ + + L+ R +KAL A L+ ++++ V ++GG+TR+ + + +S F
Sbjct: 303 LSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK 362
Query: 976 TLLTSIDPDKAVVFGAA 992
L T+++ D+A+ GAA
Sbjct: 363 PLSTTLNQDEAIAKGAA 379
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 187/377 (49%), Gaps = 22/377 (5%)
Query: 2033 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNID 2092
G+D G NS++A+ RN +++ ++ PS+V + P + Y+G+ K Q +
Sbjct: 4 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNR-YLGETGKNKQTSN 62
Query: 2093 PKNTISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISG---------IKSPIEISA 2143
KNT++++KR I D + + F +K L K + S +++A
Sbjct: 63 IKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAA 122
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+K + I I VP ++ + QR +AA++AGLN +R++N+ T+A +
Sbjct: 123 MFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGV 182
Query: 2204 AYKLDK-NIFEG-----IFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYC 2257
+Y + K ++ EG I A D+G ++ SI+ FK G KVL D + GG DFD
Sbjct: 183 SYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 242
Query: 2258 LFSWIVKNAFLK-----KLSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNIT 2311
+ K + + K N ++ + ++K++LS ++ +V+ + + V+
Sbjct: 243 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQ 302
Query: 2312 IDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 2371
+ ++ + + L+ R +KAL A L+ ++++ V ++GG+TR+ + + +S F
Sbjct: 303 LSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK 362
Query: 2372 TLLTSIDPDKAVVFGAA 2388
L T+++ D+A+ GAA
Sbjct: 363 PLSTTLNQDEAIAKGAA 379
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 187/377 (49%), Gaps = 22/377 (5%)
Query: 637 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNID 696
G+D G NS++A+ RN +++ ++ PS+V + P + Y+G+ K Q +
Sbjct: 1 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNR-YLGETGKNKQTSN 59
Query: 697 PKNTISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISG---------IKSPIEISA 747
KNT++++KR I D + + F +K L K + S +++A
Sbjct: 60 IKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAA 119
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+K + I I VP ++ + QR +AA++AGLN +R++N+ T+A +
Sbjct: 120 MFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGV 179
Query: 808 AYKLDK-NIFEG-----IFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYC 861
+Y + K ++ EG I A D+G ++ SI+ FK G KVL D + GG DFD
Sbjct: 180 SYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 239
Query: 862 LFSWIVKNAFLK-----KLSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNIT 915
+ K + + K N ++ + ++K++LS ++ +V+ + + V+
Sbjct: 240 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQ 299
Query: 916 IDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 975
+ ++ + + L+ R +KAL A L+ ++++ V ++GG+TR+ + + +S F
Sbjct: 300 LSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK 359
Query: 976 TLLTSIDPDKAVVFGAA 992
L T+++ D+A+ GAA
Sbjct: 360 PLSTTLNQDEAIAKGAA 376
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 187/377 (49%), Gaps = 22/377 (5%)
Query: 2033 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNID 2092
G+D G NS++A+ RN +++ ++ PS+V + P + Y+G+ K Q +
Sbjct: 1 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNR-YLGETGKNKQTSN 59
Query: 2093 PKNTISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISG---------IKSPIEISA 2143
KNT++++KR I D + + F +K L K + S +++A
Sbjct: 60 IKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAA 119
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+K + I I VP ++ + QR +AA++AGLN +R++N+ T+A +
Sbjct: 120 MFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGV 179
Query: 2204 AYKLDK-NIFEG-----IFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYC 2257
+Y + K ++ EG I A D+G ++ SI+ FK G KVL D + GG DFD
Sbjct: 180 SYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 239
Query: 2258 LFSWIVKNAFLK-----KLSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNIT 2311
+ K + + K N ++ + ++K++LS ++ +V+ + + V+
Sbjct: 240 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQ 299
Query: 2312 IDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 2371
+ ++ + + L+ R +KAL A L+ ++++ V ++GG+TR+ + + +S F
Sbjct: 300 LSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK 359
Query: 2372 TLLTSIDPDKAVVFGAA 2388
L T+++ D+A+ GAA
Sbjct: 360 PLSTTLNQDEAIAKGAA 376
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 187/377 (49%), Gaps = 22/377 (5%)
Query: 637 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNID 696
G+D G NS++A+ RN +++ ++ PS+V + P + Y+G+ K Q +
Sbjct: 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNR-YLGETGKNKQTSN 60
Query: 697 PKNTISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISG---------IKSPIEISA 747
KNT++++KR I D + + F +K L K + S +++A
Sbjct: 61 IKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAA 120
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+K + I I VP ++ + QR +AA++AGLN +R++N+ T+A +
Sbjct: 121 MFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGV 180
Query: 808 AYKLDK-NIFEG-----IFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYC 861
+Y + K ++ EG I A D+G ++ SI+ FK G KVL D + GG DFD
Sbjct: 181 SYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240
Query: 862 LFSWIVKNAFLK-----KLSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNIT 915
+ K + + K N ++ + ++K++LS ++ +V+ + + V+
Sbjct: 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQ 300
Query: 916 IDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 975
+ ++ + + L+ R +KAL A L+ ++++ V ++GG+TR+ + + +S F
Sbjct: 301 LSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK 360
Query: 976 TLLTSIDPDKAVVFGAA 992
L T+++ D+A+ GAA
Sbjct: 361 PLSTTLNQDEAIAKGAA 377
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 187/377 (49%), Gaps = 22/377 (5%)
Query: 2033 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNID 2092
G+D G NS++A+ RN +++ ++ PS+V + P + Y+G+ K Q +
Sbjct: 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNR-YLGETGKNKQTSN 60
Query: 2093 PKNTISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISG---------IKSPIEISA 2143
KNT++++KR I D + + F +K L K + S +++A
Sbjct: 61 IKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAA 120
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+K + I I VP ++ + QR +AA++AGLN +R++N+ T+A +
Sbjct: 121 MFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGV 180
Query: 2204 AYKLDK-NIFEG-----IFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYC 2257
+Y + K ++ EG I A D+G ++ SI+ FK G KVL D + GG DFD
Sbjct: 181 SYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240
Query: 2258 LFSWIVKNAFLK-----KLSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNIT 2311
+ K + + K N ++ + ++K++LS ++ +V+ + + V+
Sbjct: 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQ 300
Query: 2312 IDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 2371
+ ++ + + L+ R +KAL A L+ ++++ V ++GG+TR+ + + +S F
Sbjct: 301 LSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK 360
Query: 2372 TLLTSIDPDKAVVFGAA 2388
L T+++ D+A+ GAA
Sbjct: 361 PLSTTLNQDEAIAKGAA 377
>pdb|4F3Q|A Chain A, Structure Of A Yebc Family Protein (Cbu_1566) From Coxiella
Burnetii
Length = 247
Score = 135 bits (340), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/182 (39%), Positives = 109/182 (59%), Gaps = 3/182 (1%)
Query: 1195 WGLEENSRLSFDAKRGKICTRIMRELRVAINFG-NNPDTNIKLRLAIEKALDANIPKNNI 1253
W ++++ DAKRGK+ T+++RE+ VA G + D+N +LR ++KA AN PK+ I
Sbjct: 10 WANIKHAKARQDAKRGKVFTKLIREITVAARLGGEDIDSNPRLRAVVDKAFAANXPKDTI 69
Query: 1254 FRAXXXXXXXXXXXXXXXXXVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFNKNGGNL 1313
RA VRYEGY +G A+ VDC+T+N+ RTV+ +R+ F+K GNL
Sbjct: 70 TRAIKRGAGSGAGDNLVE--VRYEGYGPSGVAVXVDCLTDNKNRTVAEVRHAFSKCDGNL 127
Query: 1314 SKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPSKFIEIK 1373
EGSV ++FK G + F PN+ + + ++ALE GAED + D I + T P F +I+
Sbjct: 128 GTEGSVAYLFKQRGLITFPPNSDEEKIXEIALEVGAEDVTTNDDGSIDVTTLPEDFEKIR 187
Query: 1374 NS 1375
N+
Sbjct: 188 NA 189
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 185/377 (49%), Gaps = 22/377 (5%)
Query: 637 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNID 696
G+D G NS++A+ RN +++ ++ PS+V + P + Y+G+ K Q +
Sbjct: 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNR-YLGETGKNKQTSN 60
Query: 697 PKNTISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISG---------IKSPIEISA 747
KNT++++KR I D + + F +K L K + S +++A
Sbjct: 61 IKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAA 120
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+K + I I VP ++ + QR +AA++AGLN +R++N+ T+A +
Sbjct: 121 XFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGV 180
Query: 808 AYKLDK-NIFEG-----IFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYC 861
+Y + K ++ EG I A D+G ++ SI FK G KVL D + GG DFD
Sbjct: 181 SYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIXAFKKGQLKVLGTACDKHFGGRDFDLA 240
Query: 862 LFSWIVKNAFLK-----KLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKI-VNIT 915
+ K + + K N ++ + ++K++LS ++ +V+ + V+
Sbjct: 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVXNDVDVSSQ 300
Query: 916 IDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 975
+ ++ + + L+ R +KAL A L+ ++++ V ++GG+TR+ + + +S F
Sbjct: 301 LSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK 360
Query: 976 TLLTSIDPDKAVVFGAA 992
L T+++ D+A+ GAA
Sbjct: 361 PLSTTLNQDEAIAKGAA 377
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 185/377 (49%), Gaps = 22/377 (5%)
Query: 2033 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNID 2092
G+D G NS++A+ RN +++ ++ PS+V + P + Y+G+ K Q +
Sbjct: 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNR-YLGETGKNKQTSN 60
Query: 2093 PKNTISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISG---------IKSPIEISA 2143
KNT++++KR I D + + F +K L K + S +++A
Sbjct: 61 IKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAA 120
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+K + I I VP ++ + QR +AA++AGLN +R++N+ T+A +
Sbjct: 121 XFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGV 180
Query: 2204 AYKLDK-NIFEG-----IFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYC 2257
+Y + K ++ EG I A D+G ++ SI FK G KVL D + GG DFD
Sbjct: 181 SYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIXAFKKGQLKVLGTACDKHFGGRDFDLA 240
Query: 2258 LFSWIVKNAFLK-----KLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKI-VNIT 2311
+ K + + K N ++ + ++K++LS ++ +V+ + V+
Sbjct: 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVXNDVDVSSQ 300
Query: 2312 IDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 2371
+ ++ + + L+ R +KAL A L+ ++++ V ++GG+TR+ + + +S F
Sbjct: 301 LSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK 360
Query: 2372 TLLTSIDPDKAVVFGAA 2388
L T+++ D+A+ GAA
Sbjct: 361 PLSTTLNQDEAIAKGAA 377
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native Crystals
pdb|1DKY|B Chain B, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native Crystals
pdb|1DKZ|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1 Native Crystals
Length = 219
Score = 118 bits (296), Expect = 4e-26, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 87/124 (70%)
Query: 1009 LLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVK 1068
LLLDV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A++I V+QGE +
Sbjct: 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRAA 61
Query: 1069 NCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNL 1128
+ + L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK +N
Sbjct: 62 DNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNE 121
Query: 1129 DEIK 1132
DEI+
Sbjct: 122 DEIQ 125
Score = 118 bits (296), Expect = 4e-26, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 87/124 (70%)
Query: 2405 LLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVK 2464
LLLDV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A++I V+QGE +
Sbjct: 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRAA 61
Query: 2465 NCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNL 2524
+ + L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK +N
Sbjct: 62 DNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNE 121
Query: 2525 DEIK 2528
DEI+
Sbjct: 122 DEIQ 125
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak,
Minimized Average Structure
pdb|2BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, 25
Structures
Length = 191
Score = 118 bits (295), Expect = 5e-26, Method: Composition-based stats.
Identities = 61/126 (48%), Positives = 87/126 (69%)
Query: 1007 NFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDEL 1066
+ LLLDV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A+ I V+QGE +
Sbjct: 18 DVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKR 77
Query: 1067 VKNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNM 1126
+ + L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK +
Sbjct: 78 AADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGL 137
Query: 1127 NLDEIK 1132
N DEI+
Sbjct: 138 NEDEIQ 143
Score = 118 bits (295), Expect = 5e-26, Method: Composition-based stats.
Identities = 61/126 (48%), Positives = 87/126 (69%)
Query: 2403 NFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDEL 2462
+ LLLDV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A+ I V+QGE +
Sbjct: 18 DVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKR 77
Query: 2463 VKNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNM 2522
+ + L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK +
Sbjct: 78 AADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGL 137
Query: 2523 NLDEIK 2528
N DEI+
Sbjct: 138 NEDEIQ 143
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E. Coli
Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPO|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E. Coli
Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPP|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E. Coli
Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPP|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E. Coli
Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPQ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E. Coli
Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E. Coli
Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|E Chain E, Crystal Structure Of The Substrate Binding Domain Of E. Coli
Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|F Chain F, Crystal Structure Of The Substrate Binding Domain Of E. Coli
Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3QNJ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.Coli
Dnak In Complex With The Antimicrobial Peptide Oncocin
pdb|3QNJ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.Coli
Dnak In Complex With The Antimicrobial Peptide Oncocin
pdb|4E81|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.Coli
Dnak In Complex With A Short Apidaecin Peptide
pdb|4E81|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.Coli
Dnak In Complex With A Short Apidaecin Peptide
Length = 219
Score = 118 bits (295), Expect = 5e-26, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 86/124 (69%)
Query: 1009 LLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVK 1068
LLLDV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A+ I V+QGE +
Sbjct: 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAA 61
Query: 1069 NCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNL 1128
+ + L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK +N
Sbjct: 62 DNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNE 121
Query: 1129 DEIK 1132
DEI+
Sbjct: 122 DEIQ 125
Score = 118 bits (295), Expect = 5e-26, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 86/124 (69%)
Query: 2405 LLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVK 2464
LLLDV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A+ I V+QGE +
Sbjct: 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAA 61
Query: 2465 NCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNL 2524
+ + L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK +N
Sbjct: 62 DNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNE 121
Query: 2525 DEIK 2528
DEI+
Sbjct: 122 DEIQ 125
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1 Selenomethionyl
Crystals
Length = 219
Score = 118 bits (295), Expect = 5e-26, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 86/124 (69%)
Query: 1009 LLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVK 1068
LLLDV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A+ I V+QGE +
Sbjct: 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAA 61
Query: 1069 NCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNL 1128
+ + L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK +N
Sbjct: 62 DNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNE 121
Query: 1129 DEIK 1132
DEI+
Sbjct: 122 DEIQ 125
Score = 118 bits (295), Expect = 5e-26, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 86/124 (69%)
Query: 2405 LLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVK 2464
LLLDV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A+ I V+QGE +
Sbjct: 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAA 61
Query: 2465 NCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNL 2524
+ + L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK +N
Sbjct: 62 DNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNE 121
Query: 2525 DEIK 2528
DEI+
Sbjct: 122 DEIQ 125
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
pdb|7HSC|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
Length = 159
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 79/114 (69%)
Query: 1007 NFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDEL 1066
+ LLLDV PLSLGIET GG++ +I RNTTIP + FTT+ DNQ + I+V +GE +
Sbjct: 6 DLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAM 65
Query: 1067 VKNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITI 1120
K+ +L FEL IPP P G +I+VT+ +DA+G+L++ A +K +GK+ ITI
Sbjct: 66 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 119
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 79/114 (69%)
Query: 2403 NFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDEL 2462
+ LLLDV PLSLGIET GG++ +I RNTTIP + FTT+ DNQ + I+V +GE +
Sbjct: 6 DLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAM 65
Query: 2463 VKNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITI 2516
K+ +L FEL IPP P G +I+VT+ +DA+G+L++ A +K +GK+ ITI
Sbjct: 66 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 119
>pdb|1LFP|A Chain A, Crystal Structure Of A Conserved Hypothetical Protein Aq1575
From Aquifex Aeolicus
Length = 249
Score = 116 bits (291), Expect = 1e-25, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 111/211 (52%), Gaps = 5/211 (2%)
Query: 1195 WGLEENSRLSFDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDANIPKNNI 1253
W ++ + DA+RGK+ ++++RE+ VA G NP+ N +LR AIE+A AN P NI
Sbjct: 7 WAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANXPWENI 66
Query: 1254 FRAXXXXXXXXXXXXXXXXXVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFNKNGGNL 1313
RA V YEGY+ G A+ V T+NR RT S +R++F K+GGNL
Sbjct: 67 ERAIKKGAGELEGEQFEE--VIYEGYAPGGVAVXVLATTDNRNRTTSEVRHVFTKHGGNL 124
Query: 1314 SKEGSVLFMFKHCGQL-LFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPSKFIEI 1372
G V ++F+ G + + + LL+ A+E GAED ++ I I T P + E+
Sbjct: 125 GASGCVSYLFERKGYIEVPAKEVSEEELLEKAIEVGAEDVQPGEEVHI-IYTVPEELYEV 183
Query: 1373 KNSLEMTGFKAESSGIVMRPYTNIVFKDATT 1403
K +LE G E + I +P + + D T
Sbjct: 184 KENLEKLGVPIEKAQITWKPISTVQINDEET 214
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|C Chain C, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|D Chain D, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans
Length = 151
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 84/122 (68%)
Query: 1012 DVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQ 1071
DV PLSLGIET+GG++ K+I RNTTIP S F+T D QT + IKV QGE E+ + +
Sbjct: 4 DVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNK 63
Query: 1072 VLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEI 1131
+L F L IPP P G +++VT+ +DA+G++++ A ++ +GK++ I I+ ++ D+I
Sbjct: 64 LLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQI 123
Query: 1132 KN 1133
+N
Sbjct: 124 EN 125
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 84/122 (68%)
Query: 2408 DVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQ 2467
DV PLSLGIET+GG++ K+I RNTTIP S F+T D QT + IKV QGE E+ + +
Sbjct: 4 DVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNK 63
Query: 2468 VLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEI 2527
+L F L IPP P G +++VT+ +DA+G++++ A ++ +GK++ I I+ ++ D+I
Sbjct: 64 LLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQI 123
Query: 2528 KN 2529
+N
Sbjct: 124 EN 125
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda Prote
(Mortalin)
pdb|3N8E|B Chain B, Substrate Binding Domain Of The Human Heat Shock 70kda Prote
(Mortalin)
Length = 182
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 84/126 (66%)
Query: 1008 FLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELV 1067
F +DV PLSLGIET+GG+ K+I RNTTIP S F+T D QT + IKV QGE E+
Sbjct: 20 FQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMA 79
Query: 1068 KNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMN 1127
+ ++L F L IPP P G +I+VT+ +DA+G++ + A +K +G+++ I I+ ++
Sbjct: 80 GDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLS 139
Query: 1128 LDEIKN 1133
D+I+N
Sbjct: 140 KDDIEN 145
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 84/126 (66%)
Query: 2404 FLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELV 2463
F +DV PLSLGIET+GG+ K+I RNTTIP S F+T D QT + IKV QGE E+
Sbjct: 20 FQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMA 79
Query: 2464 KNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMN 2523
+ ++L F L IPP P G +I+VT+ +DA+G++ + A +K +G+++ I I+ ++
Sbjct: 80 GDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLS 139
Query: 2524 LDEIKN 2529
D+I+N
Sbjct: 140 KDDIEN 145
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In The
Apo Form
Length = 115
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 77/110 (70%)
Query: 1012 DVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQ 1071
DV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A+ I V+QGE + + +
Sbjct: 1 DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 60
Query: 1072 VLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIK 1121
L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK
Sbjct: 61 SLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIK 110
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 77/110 (70%)
Query: 2408 DVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQ 2467
DV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A+ I V+QGE + + +
Sbjct: 1 DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 60
Query: 2468 VLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIK 2517
L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK
Sbjct: 61 SLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIK 110
>pdb|1I7H|A Chain A, Crystal Sturcuture Of Fdx
pdb|1I7H|B Chain B, Crystal Sturcuture Of Fdx
pdb|1I7H|C Chain C, Crystal Sturcuture Of Fdx
Length = 111
Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/78 (60%), Positives = 60/78 (76%)
Query: 2525 DEIKNGAIFNENSGISLCDALLKNSIFIEHACEKSCACATCHVIIREGFNEINKANEVEE 2584
D +GA+ NSG ++ DA L+N I IEHACEKSCAC TCH I+REGF+ + +++E E+
Sbjct: 11 DLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQED 70
Query: 2585 DMLNKAWGLEENSRLSCQ 2602
DML+KAWGLE SRLSCQ
Sbjct: 71 DMLDKAWGLEPESRLSCQ 88
Score = 105 bits (261), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 1129 DEIKNGAIFNENSGISLCDALLKNSIFIEHACEKSCACATCHVIIREGFNEINKANEVEE 1188
D +GA+ NSG ++ DA L+N I IEHACEKSCAC TCH I+REGF+ + +++E E+
Sbjct: 11 DLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQED 70
Query: 1189 DMLNKAWGLEENSRLSFDAK 1208
DML+KAWGLE SRLS A+
Sbjct: 71 DMLDKAWGLEPESRLSCQAR 90
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
pdb|4GNI|B Chain B, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
Length = 409
Score = 108 bits (271), Expect = 3e-23, Method: Composition-based stats.
Identities = 103/389 (26%), Positives = 182/389 (46%), Gaps = 29/389 (7%)
Query: 638 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDP 697
V IGI FG +NS +A ++ EV+ ++ G IP+I+ Y+ DG Y G++AK +P
Sbjct: 14 VVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYV-DGDEYYGQQAKNFLVRNP 72
Query: 698 KNTISSIKRFIARDLKNIN-TNSFPYDFQNKFGMLHIKTIS---------GIKSPIEISA 747
KNT++ + + +D K+++ T++ + G + TI + EI+
Sbjct: 73 KNTVAYFRDILGQDFKSVDPTHNHASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIAT 132
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
+ L A + ++ AVIT+P F + Q+ AA A L VL+L++EP +A +
Sbjct: 133 RYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVL 192
Query: 808 AY--KLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 865
AY + + I + I V DLGG D+++L ++G++ +L+ D G D L
Sbjct: 193 AYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDH 252
Query: 866 IVKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITID 917
K K KD + L +++ K LS ++ +V+ L D TI+
Sbjct: 253 FSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTIN 312
Query: 918 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFF---- 973
++ TI + + L A+ A L D++ VI+ GG++ I F
Sbjct: 313 RLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPEST 372
Query: 974 ----KTTLLTSIDPDKAVVFGAAIQANFL 998
+T ++++P + GAA+QA+ +
Sbjct: 373 RILAPSTDPSALNPSELQARGAALQASLI 401
Score = 108 bits (271), Expect = 3e-23, Method: Composition-based stats.
Identities = 103/389 (26%), Positives = 182/389 (46%), Gaps = 29/389 (7%)
Query: 2034 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDP 2093
V IGI FG +NS +A ++ EV+ ++ G IP+I+ Y+ DG Y G++AK +P
Sbjct: 14 VVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYV-DGDEYYGQQAKNFLVRNP 72
Query: 2094 KNTISSIKRFIARDLKNIN-TNSFPYDFQNKFGMLHIKTIS---------GIKSPIEISA 2143
KNT++ + + +D K+++ T++ + G + TI + EI+
Sbjct: 73 KNTVAYFRDILGQDFKSVDPTHNHASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIAT 132
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
+ L A + ++ AVIT+P F + Q+ AA A L VL+L++EP +A +
Sbjct: 133 RYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVL 192
Query: 2204 AY--KLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 2261
AY + + I + I V DLGG D+++L ++G++ +L+ D G D L
Sbjct: 193 AYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDH 252
Query: 2262 IVKNAFLKKLSYKD-------VNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITID 2313
K K KD + L +++ K LS ++ +V+ L D TI+
Sbjct: 253 FSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTIN 312
Query: 2314 MKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFF---- 2369
++ TI + + L A+ A L D++ VI+ GG++ I F
Sbjct: 313 RLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPEST 372
Query: 2370 ----KTTLLTSIDPDKAVVFGAAIQANFL 2394
+T ++++P + GAA+QA+ +
Sbjct: 373 RILAPSTDPSALNPSELQARGAALQASLI 401
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak Bound
To The Peptide Nrllltg
Length = 135
Score = 108 bits (271), Expect = 3e-23, Method: Composition-based stats.
Identities = 54/112 (48%), Positives = 79/112 (70%)
Query: 1010 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKN 1069
++DV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A+ I V+QGE + +
Sbjct: 19 MVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD 78
Query: 1070 CQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIK 1121
+ L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK
Sbjct: 79 NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIK 130
Score = 108 bits (271), Expect = 3e-23, Method: Composition-based stats.
Identities = 54/112 (48%), Positives = 79/112 (70%)
Query: 2406 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKN 2465
++DV PLSLGIET+GG++ +I +NTTIP +S F+T +DNQ+A+ I V+QGE + +
Sbjct: 19 MVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD 78
Query: 2466 CQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIK 2517
+ L F L I P P G +I+VT+ +DADG+L + A +K SGK++ ITIK
Sbjct: 79 NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIK 130
>pdb|2Z7E|A Chain A, Crystal Structure Of Aquifex Aeolicus Iscu With Bound
[2fe- 2s] Cluster
pdb|2Z7E|B Chain B, Crystal Structure Of Aquifex Aeolicus Iscu With Bound
[2fe- 2s] Cluster
pdb|2Z7E|C Chain C, Crystal Structure Of Aquifex Aeolicus Iscu With Bound
[2fe- 2s] Cluster
Length = 157
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 4/96 (4%)
Query: 375 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVN-KNGVITDAKFKTY 433
Y+EKVLDH+ NPRNVGV E + G G G PACG M IKVN +N VI D +FKT+
Sbjct: 5 YNEKVLDHFLNPRNVGVLEDAN---GVGQCGNPACGAAMLFTIKVNPENDVIEDVRFKTF 61
Query: 434 GCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 469
GCGSAIA SS++TE VKGK + A+++ DI EEL
Sbjct: 62 GCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEEL 97
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 4/96 (4%)
Query: 1771 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVN-KNGVITDAKFKTY 1829
Y+EKVLDH+ NPRNVGV E + G G G PACG M IKVN +N VI D +FKT+
Sbjct: 5 YNEKVLDHFLNPRNVGVLEDAN---GVGQCGNPACGAAMLFTIKVNPENDVIEDVRFKTF 61
Query: 1830 GCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 1865
GCGSAIA SS++TE VKGK + A+++ DI EEL
Sbjct: 62 GCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEEL 97
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F44e5.5
From C.Elegans.
pdb|3DOB|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F44e5.5
From C.Elegans
Length = 152
Score = 105 bits (261), Expect = 4e-22, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 73/110 (66%)
Query: 1012 DVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQ 1071
DV PLSLGIET GG++ +I RNT IP FTT+ DNQ ++I+V +GE + ++
Sbjct: 4 DVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNH 63
Query: 1072 VLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIK 1121
L FEL IPP P G +I+VT+ +DA+G+L++ A +K +GK ITI+
Sbjct: 64 RLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQ 113
Score = 105 bits (261), Expect = 4e-22, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 73/110 (66%)
Query: 2408 DVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQ 2467
DV PLSLGIET GG++ +I RNT IP FTT+ DNQ ++I+V +GE + ++
Sbjct: 4 DVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNH 63
Query: 2468 VLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIK 2517
L FEL IPP P G +I+VT+ +DA+G+L++ A +K +GK ITI+
Sbjct: 64 RLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQ 113
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D
Precursor From C.Elegans
Length = 152
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 77/114 (67%)
Query: 1012 DVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQ 1071
DV PL+LGIET+GG++ K+I RNT IP S F+T D+Q+A++I + +GE +V +
Sbjct: 4 DVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNH 63
Query: 1072 VLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYN 1125
L NF++ IPP P G +I+VT+++D +G+L + A +K +G K +TI +N
Sbjct: 64 KLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHN 117
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 77/114 (67%)
Query: 2408 DVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQ 2467
DV PL+LGIET+GG++ K+I RNT IP S F+T D+Q+A++I + +GE +V +
Sbjct: 4 DVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNH 63
Query: 2468 VLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYN 2521
L NF++ IPP P G +I+VT+++D +G+L + A +K +G K +TI +N
Sbjct: 64 KLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHN 117
>pdb|4EB5|C Chain C, A. Fulgidus Iscs-Iscu Complex Structure
pdb|4EB5|D Chain D, A. Fulgidus Iscs-Iscu Complex Structure
pdb|4EB7|C Chain C, A. Fulgidus Iscs-Iscu Complex Structure
Length = 153
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%), Gaps = 4/95 (4%)
Query: 375 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 434
YS+KV DH++NPRNVG E D G G VG P CGD+M + IKV K+ I D KF+T+G
Sbjct: 2 YSDKVFDHFQNPRNVGKIEDAD---GVGTVGNPVCGDLMTIYIKV-KDNRIEDIKFQTFG 57
Query: 435 CGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 469
C +AIA+SS+ TE KGKT++EA+ I +AE L
Sbjct: 58 CAAAIATSSMATEMAKGKTIEEALKITRDAVAEAL 92
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%), Gaps = 4/95 (4%)
Query: 1771 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 1830
YS+KV DH++NPRNVG E D G G VG P CGD+M + IKV K+ I D KF+T+G
Sbjct: 2 YSDKVFDHFQNPRNVGKIEDAD---GVGTVGNPVCGDLMTIYIKV-KDNRIEDIKFQTFG 57
Query: 1831 CGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 1865
C +AIA+SS+ TE KGKT++EA+ I +AE L
Sbjct: 58 CAAAIATSSMATEMAKGKTIEEALKITRDAVAEAL 92
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2 Protein
From Saccharomyces Cerevisiae
Length = 152
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 71/109 (65%)
Query: 1012 DVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQ 1071
DV L+LGIET GG++ +I RNT IP S F+T DNQ + IKV +GE + K+
Sbjct: 4 DVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNN 63
Query: 1072 VLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITI 1120
+L FEL IPP P G +I+VT+ +DA+G+L + A +K +GK + ITI
Sbjct: 64 LLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITI 112
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 71/109 (65%)
Query: 2408 DVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQ 2467
DV L+LGIET GG++ +I RNT IP S F+T DNQ + IKV +GE + K+
Sbjct: 4 DVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNN 63
Query: 2468 VLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITI 2516
+L FEL IPP P G +I+VT+ +DA+G+L + A +K +GK + ITI
Sbjct: 64 LLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITI 112
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|D Chain D, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 191
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 822 VYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKD-- 879
++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L + V+ K+ KD
Sbjct: 17 IFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEE--FKRKHKKDIS 74
Query: 880 -----VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDMKQFFTITQHLVNRTI 933
V L K LS + L + L + +I +F + L T+
Sbjct: 75 QNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTL 134
Query: 934 LLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLT-SIDPDKAVVF 989
KAL DA L I++++LVGGSTR+ + + + +FF L SI+PD+AV +
Sbjct: 135 EPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAY 191
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 2218 VYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKD-- 2275
++DLGGGTFD+SIL +G+F+V + GD++LGG+DFD L + V+ K+ KD
Sbjct: 17 IFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEE--FKRKHKKDIS 74
Query: 2276 -----VNILMIKSREIKELLSYQSSVKLNV-KLSDKKIVNITIDMKQFFTITQHLVNRTI 2329
V L K LS + L + L + +I +F + L T+
Sbjct: 75 QNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTL 134
Query: 2330 LLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLT-SIDPDKAVVF 2385
KAL DA L I++++LVGGSTR+ + + + +FF L SI+PD+AV +
Sbjct: 135 EPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAY 191
>pdb|1T3I|A Chain A, Structure Of Slr0077SUFS, THE ESSENTIAL CYSTEINE Desulfurase
From Synechocystis Pcc 6803
pdb|1T3I|B Chain B, Structure Of Slr0077SUFS, THE ESSENTIAL CYSTEINE Desulfurase
From Synechocystis Pcc 6803
Length = 420
Score = 88.6 bits (218), Expect = 4e-17, Method: Composition-based stats.
Identities = 105/400 (26%), Positives = 165/400 (41%), Gaps = 40/400 (10%)
Query: 1396 IVFKDATTPIDPR-VVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-D 1453
+ +A T PR V++K++ Y N H A A E RN+VA+ I A
Sbjct: 30 VYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARS 89
Query: 1454 PREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLE-NDGFRVTYL 1512
PREI++T ATE+ NL K G IIT EH S L + + G + ++
Sbjct: 90 PREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFV 149
Query: 1513 KPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA 1572
+ L + + T LV+V+ ++N +G + P EI +L G DA Q+
Sbjct: 150 QLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQS 209
Query: 1573 VGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQ--IHGGGH------- 1623
+++Q D + S HK+ P GIG LY + +EA GGG
Sbjct: 210 APHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEI---LEAMPPFFGGGEMIAEVFF 266
Query: 1624 --------EYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIE 1674
+ +GT A + + +G A L + M+ + L L+ GL + I
Sbjct: 267 DHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQ-IP 325
Query: 1675 EIYINGDMNNRIPHNLNISFNFI---EGESLLMAIKD-IAVSSGSACTSASLEPSYVLRA 1730
++ + G SFN + M +D IA+ SG CT +P + L
Sbjct: 326 QLRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCT----QPLHRLFD 381
Query: 1731 LGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKEFFMS 1770
A S R ++ + T++EID ++ L+ F S
Sbjct: 382 -------ASGSARASLYFYNTKEEIDLFLQSLQATIRFFS 414
Score = 88.2 bits (217), Expect = 5e-17, Method: Composition-based stats.
Identities = 104/398 (26%), Positives = 165/398 (41%), Gaps = 39/398 (9%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPR 59
+D +AT+ V++K++ Y N H A A E RN+VA+ I A PR
Sbjct: 32 LDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPR 91
Query: 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLE-NDGFRVTYLKP 118
EI++T ATE+ NL K G IIT EH S L + + G + +++
Sbjct: 92 EIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQL 151
Query: 119 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVG 178
L + + T LV+V+ ++N +G + P EI +L G DA Q+
Sbjct: 152 DEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAP 211
Query: 179 KIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQ--IHGGGH--------- 227
+++Q D + S HK+ P GIG LY + +EA GGG
Sbjct: 212 HYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEI---LEAMPPFFGGGEMIAEVFFDH 268
Query: 228 ------EYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEI 280
+ +GT A + + +G A L + M+ + L L+ GL + I ++
Sbjct: 269 FTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQ-IPQL 327
Query: 281 YINGDMNNRIPHNLNISFNFI---EGESLLMAIKD-IAVSSGSACTSASLEPSYVLRALG 336
+ G SFN + M +D IA+ SG CT +P + L
Sbjct: 328 RLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCT----QPLHRLFD-- 381
Query: 337 CNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKEFFMS 374
A S R ++ + T++EID ++ L+ F S
Sbjct: 382 -----ASGSARASLYFYNTKEEIDLFLQSLQATIRFFS 414
>pdb|1C0N|A Chain A, Csdb Protein, Nifs Homologue
Length = 406
Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 6/215 (2%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPR 59
+D +A+ +V+D + R + + H A + +E R + I A
Sbjct: 27 LDSAASAQKPSQVIDAEAEFYRHGYAAVHAGAHTLSAQATEKMENVRKRASLFINARSAE 86
Query: 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL---ENDGFRVTYL 116
E+++ G TE NL + + G +II Q EH + + + L RV L
Sbjct: 87 ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPL 146
Query: 117 KPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA 176
P +G + L L + T L+++ V+N +G P+ E+ L G D AQA
Sbjct: 147 NP--DGTLQLETLPTLFDAATRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQA 204
Query: 177 VGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR 211
V +++Q D FS HK+YGP GIG LY++
Sbjct: 205 VMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVK 239
Score = 77.4 bits (189), Expect = 9e-14, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 6/204 (2%)
Query: 1408 RVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATES 1466
+V+D + R + + H A + +E R + I A E+++ G TE
Sbjct: 38 QVIDAEAEFYRHGYAAVHAGAHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEG 97
Query: 1467 NNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL---ENDGFRVTYLKPKNNGLITLS 1523
NL + + G +II Q EH + + + L RV L P +G + L
Sbjct: 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLE 155
Query: 1524 QLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNY 1583
L + T L+++ V+N +G P+ E+ L G D AQAV +++Q
Sbjct: 156 TLPTLFDAATRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL 215
Query: 1584 KVDLMSFSAHKIYGPKGIGALYIR 1607
D FS HK+YGP GIG LY++
Sbjct: 216 DCDFYVFSGHKLYGPTGIGILYVK 239
>pdb|1I29|A Chain A, Crystal Structure Of Csdb Complexed With
L-Propargylglycine
Length = 406
Score = 78.6 bits (192), Expect = 5e-14, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 6/215 (2%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPR 59
+D +A+ +V+D + R + H A + +E R + I A
Sbjct: 27 LDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAE 86
Query: 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL---ENDGFRVTYL 116
E+++ G TE NL + + G +II Q EH + + + L RV L
Sbjct: 87 ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPL 146
Query: 117 KPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA 176
P +G + L L T L+++ V+N +G P+ E+ L G D AQA
Sbjct: 147 NP--DGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQA 204
Query: 177 VGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR 211
V +++Q D FS HK+YGP GIG LY++
Sbjct: 205 VMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVK 239
Score = 75.9 bits (185), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 6/204 (2%)
Query: 1408 RVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATES 1466
+V+D + R + H A + +E R + I A E+++ G TE
Sbjct: 38 QVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEG 97
Query: 1467 NNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL---ENDGFRVTYLKPKNNGLITLS 1523
NL + + G +II Q EH + + + L RV L P +G + L
Sbjct: 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLE 155
Query: 1524 QLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNY 1583
L T L+++ V+N +G P+ E+ L G D AQAV +++Q
Sbjct: 156 TLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL 215
Query: 1584 KVDLMSFSAHKIYGPKGIGALYIR 1607
D FS HK+YGP GIG LY++
Sbjct: 216 DCDFYVFSGHKLYGPTGIGILYVK 239
>pdb|1JF9|A Chain A, Crystal Structure Of Selenocysteine Lyase
Length = 408
Score = 78.6 bits (192), Expect = 5e-14, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 6/215 (2%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPR 59
+D +A+ +V+D + R + H A + +E R + I A
Sbjct: 29 LDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAE 88
Query: 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL---ENDGFRVTYL 116
E+++ G TE NL + + G +II Q EH + + + L RV L
Sbjct: 89 ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPL 148
Query: 117 KPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA 176
P +G + L L T L+++ V+N +G P+ E+ L G D AQA
Sbjct: 149 NP--DGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQA 206
Query: 177 VGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR 211
V +++Q D FS HK+YGP GIG LY++
Sbjct: 207 VMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVK 241
Score = 75.9 bits (185), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 6/204 (2%)
Query: 1408 RVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATES 1466
+V+D + R + H A + +E R + I A E+++ G TE
Sbjct: 40 QVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEG 99
Query: 1467 NNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL---ENDGFRVTYLKPKNNGLITLS 1523
NL + + G +II Q EH + + + L RV L P +G + L
Sbjct: 100 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLE 157
Query: 1524 QLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNY 1583
L T L+++ V+N +G P+ E+ L G D AQAV +++Q
Sbjct: 158 TLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL 217
Query: 1584 KVDLMSFSAHKIYGPKGIGALYIR 1607
D FS HK+YGP GIG LY++
Sbjct: 218 DCDFYVFSGHKLYGPTGIGILYVK 241
>pdb|1KMJ|A Chain A, E. Coli NifsCSDB PROTEIN AT 2.0A WITH THE CYSTEINE
PERSULFIDE Intermediate (Residue Css).
pdb|1KMK|A Chain A, E. Coli NifsCSDB PROTEIN AT 2.20A WITH THE CYSTEINE
PERSELENIDE Intermediate (Residue Csz)
Length = 406
Score = 78.6 bits (192), Expect = 5e-14, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 6/215 (2%)
Query: 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPR 59
+D +A+ +V+D + R + H A + +E R + I A
Sbjct: 27 LDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAE 86
Query: 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL---ENDGFRVTYL 116
E+++ G TE NL + + G +II Q EH + + + L RV L
Sbjct: 87 ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPL 146
Query: 117 KPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA 176
P +G + L L T L+++ V+N +G P+ E+ L G D AQA
Sbjct: 147 NP--DGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQA 204
Query: 177 VGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR 211
V +++Q D FS HK+YGP GIG LY++
Sbjct: 205 VMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVK 239
Score = 75.9 bits (185), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 6/204 (2%)
Query: 1408 RVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATES 1466
+V+D + R + H A + +E R + I A E+++ G TE
Sbjct: 38 QVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEG 97
Query: 1467 NNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL---ENDGFRVTYLKPKNNGLITLS 1523
NL + + G +II Q EH + + + L RV L P +G + L
Sbjct: 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLE 155
Query: 1524 QLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNY 1583
L T L+++ V+N +G P+ E+ L G D AQAV +++Q
Sbjct: 156 TLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL 215
Query: 1584 KVDLMSFSAHKIYGPKGIGALYIR 1607
D FS HK+YGP GIG LY++
Sbjct: 216 DCDFYVFSGHKLYGPTGIGILYVK 239
>pdb|1XJS|A Chain A, Solution Structure Of Iron-Sulfur Cluster Assembly Protein
Iscu From Bacillus Subtilis, With Zinc Bound At The
Active Site. Northeast Structural Genomics Consortium
Target Sr17
pdb|2AZH|A Chain A, Solution Structure Of Iron-Sulfur Cluster Assembly Protein
Sufu From Bacillus Subtilis, With Zinc Bound At The
Active Site. Northeast Structural Genomics Consortium
Target Sr17
Length = 147
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Query: 375 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 434
Y + ++DHY+NPRN GV ND+ V + P CGD ++L +K++ + ++ DAKF+ G
Sbjct: 11 YRQVIMDHYKNPRNKGVL--NDSIVVD--MNNPTCGDRIRLTMKLDGD-IVEDAKFEGEG 65
Query: 435 CGSAIASSSLVTEWVKGKTLDEAMSI 460
C ++AS+S++T+ +KGK ++ A+S+
Sbjct: 66 CSISMASASMMTQAIKGKDIETALSM 91
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Query: 1771 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 1830
Y + ++DHY+NPRN GV ND+ V + P CGD ++L +K++ + ++ DAKF+ G
Sbjct: 11 YRQVIMDHYKNPRNKGVL--NDSIVVD--MNNPTCGDRIRLTMKLDGD-IVEDAKFEGEG 65
Query: 1831 CGSAIASSSLVTEWVKGKTLDEAMSI 1856
C ++AS+S++T+ +KGK ++ A+S+
Sbjct: 66 CSISMASASMMTQAIKGKDIETALSM 91
>pdb|1R94|A Chain A, Crystal Structure Of Isca (mercury Derivative)
pdb|1R94|B Chain B, Crystal Structure Of Isca (mercury Derivative)
pdb|1R95|A Chain A, Crystal Structure Of Isca (Native)
pdb|1R95|B Chain B, Crystal Structure Of Isca (Native)
Length = 118
Score = 69.7 bits (169), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 470 VTKKAAKYINKYIQKRGKGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIFI 529
++ AA +N ++ RGKG GLRLGV GCSG++Y LE+VDE ED VF+ GV++ +
Sbjct: 5 LSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVV 64
Query: 530 NEKDLLYFN 538
+ K L + +
Sbjct: 65 DGKSLQFLD 73
Score = 69.7 bits (169), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 1866 VTKKAAKYINKYIQKRGKGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIFI 1925
++ AA +N ++ RGKG GLRLGV GCSG++Y LE+VDE ED VF+ GV++ +
Sbjct: 5 LSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVV 64
Query: 1926 NEKDLLYFN 1934
+ K L + +
Sbjct: 65 DGKSLQFLD 73
>pdb|1S98|A Chain A, E.Coli Isca Crystal Structure To 2.3 A
pdb|1S98|B Chain B, E.Coli Isca Crystal Structure To 2.3 A
Length = 107
Score = 68.9 bits (167), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 470 VTKKAAKYINKYIQKRGKGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIFI 529
++ AA +N ++ RGKG GLRLGV GCSG++Y LE+VDE ED VF+ GV++ +
Sbjct: 5 LSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVV 64
Query: 530 NEKDLLYFN 538
+ K + + +
Sbjct: 65 DGKSMQFLD 73
Score = 68.9 bits (167), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 1866 VTKKAAKYINKYIQKRGKGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIFI 1925
++ AA +N ++ RGKG GLRLGV GCSG++Y LE+VDE ED VF+ GV++ +
Sbjct: 5 LSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVV 64
Query: 1926 NEKDLLYFN 1934
+ K + + +
Sbjct: 65 DGKSMQFLD 73
>pdb|2WLB|A Chain A, Adrenodoxin-Like Ferredoxin Etp1fd(516-618) Of
Schizosaccharomyces Pombe Mitochondria
pdb|2WLB|B Chain B, Adrenodoxin-Like Ferredoxin Etp1fd(516-618) Of
Schizosaccharomyces Pombe Mitochondria
Length = 103
Score = 68.9 bits (167), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 2536 NSGISLCDALLKNSIFIEHACEKSCACATCHVIIR-EGFNEINKANEVEEDMLNKAWGLE 2594
N G S+ D N+I +E ACE S AC+TCHVI+ E + ++ E EEDML+ A+GLE
Sbjct: 21 NEGDSILDLAHANNIDLEGACEGSVACSTCHVIVDPEHYELLDPPEEDEEDMLDLAFGLE 80
Query: 2595 ENSRLSCQ 2602
E SRL CQ
Sbjct: 81 ETSRLGCQ 88
Score = 63.2 bits (152), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 1140 NSGISLCDALLKNSIFIEHACEKSCACATCHVIIR-EGFNEINKANEVEEDMLNKAWGLE 1198
N G S+ D N+I +E ACE S AC+TCHVI+ E + ++ E EEDML+ A+GLE
Sbjct: 21 NEGDSILDLAHANNIDLEGACEGSVACSTCHVIVDPEHYELLDPPEEDEEDMLDLAFGLE 80
Query: 1199 ENSRL 1203
E SRL
Sbjct: 81 ETSRL 85
>pdb|1MW7|A Chain A, X-Ray Structure Of Y162_helpy Northeast Structural Genomics
Consortium Target Pr6
Length = 240
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 1202 RLSFDAKRGKICTRIMRELRVAINF-----GNNPDTNIKLRLAIEKALDANIPKNNIFRA 1256
R + KR +++ +L AI G+ PDTN KLR AI A N+PK+NI A
Sbjct: 8 RRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAA 67
Query: 1257 XXXXXXXXXXXXXXXXXVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFNK-NGGNLSK 1315
+ YEG + G II++C+T+N RT++N+++ FNK G ++
Sbjct: 68 IKRASSKEGNLSE----ITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123
Query: 1316 EGSVLFMFKHCGQLLFLPNTKKNTLLDLALE 1346
GS+ FMF L N +N L L+LE
Sbjct: 124 NGSLEFMFNRKSVFECLKNEVEN--LKLSLE 152
>pdb|2QQ4|A Chain A, Crystal Structure Of Iron-Sulfur Cluster Biosynthesis
Protein Iscu (Ttha1736) From Thermus Thermophilus Hb8
pdb|2QQ4|B Chain B, Crystal Structure Of Iron-Sulfur Cluster Biosynthesis
Protein Iscu (Ttha1736) From Thermus Thermophilus Hb8
pdb|2QQ4|C Chain C, Crystal Structure Of Iron-Sulfur Cluster Biosynthesis
Protein Iscu (Ttha1736) From Thermus Thermophilus Hb8
pdb|2QQ4|D Chain D, Crystal Structure Of Iron-Sulfur Cluster Biosynthesis
Protein Iscu (Ttha1736) From Thermus Thermophilus Hb8
pdb|2QQ4|E Chain E, Crystal Structure Of Iron-Sulfur Cluster Biosynthesis
Protein Iscu (Ttha1736) From Thermus Thermophilus Hb8
pdb|2QQ4|F Chain F, Crystal Structure Of Iron-Sulfur Cluster Biosynthesis
Protein Iscu (Ttha1736) From Thermus Thermophilus Hb8
pdb|2QQ4|G Chain G, Crystal Structure Of Iron-Sulfur Cluster Biosynthesis
Protein Iscu (Ttha1736) From Thermus Thermophilus Hb8
pdb|2QQ4|H Chain H, Crystal Structure Of Iron-Sulfur Cluster Biosynthesis
Protein Iscu (Ttha1736) From Thermus Thermophilus Hb8
pdb|2QQ4|I Chain I, Crystal Structure Of Iron-Sulfur Cluster Biosynthesis
Protein Iscu (Ttha1736) From Thermus Thermophilus Hb8
pdb|2QQ4|J Chain J, Crystal Structure Of Iron-Sulfur Cluster Biosynthesis
Protein Iscu (Ttha1736) From Thermus Thermophilus Hb8
Length = 138
Score = 67.0 bits (162), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 375 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 434
Y E +LDHY++PRN GV + G GM P+CGD +++ + + + I D +F+ G
Sbjct: 8 YREILLDHYQSPRNFGVLPQATKQAG-GM--NPSCGDQVEVMVLLEGD-TIADIRFQGQG 63
Query: 435 CGSAIASSSLVTEWVKGKTLDEAMSI 460
C + AS+SL+TE VKGK + EA+ +
Sbjct: 64 CAISTASASLMTEAVKGKKVAEALEL 89
Score = 67.0 bits (162), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 1771 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 1830
Y E +LDHY++PRN GV + G GM P+CGD +++ + + + I D +F+ G
Sbjct: 8 YREILLDHYQSPRNFGVLPQATKQAG-GM--NPSCGDQVEVMVLLEGD-TIADIRFQGQG 63
Query: 1831 CGSAIASSSLVTEWVKGKTLDEAMSI 1856
C + AS+SL+TE VKGK + EA+ +
Sbjct: 64 CAISTASASLMTEAVKGKKVAEALEL 89
>pdb|3HUI|A Chain A, Crystal Structure Of The Mutant A105r Of [2fe-2s] Ferredoxin
In The Class I Cyp199a2 System From Rhodopseudomonas
Palustris
Length = 126
Score = 58.9 bits (141), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 2538 GISLCDALLKNSI-FIEHACEKSCACATCHVIIREGFNE-INKANEVEEDMLNKAWGLEE 2595
G ++ +A ++N+I +E C +CACATCHV + E + E + + +EEDML+ + +
Sbjct: 41 GATVMEAAIRNAIPGVEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYDVRP 100
Query: 2596 NSRLSCQ 2602
NSRLSCQ
Sbjct: 101 NSRLSCQ 107
Score = 53.1 bits (126), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1142 GISLCDALLKNSI-FIEHACEKSCACATCHVIIREGFNE-INKANEVEEDMLNKAWGLEE 1199
G ++ +A ++N+I +E C +CACATCHV + E + E + + +EEDML+ + +
Sbjct: 41 GATVMEAAIRNAIPGVEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYDVRP 100
Query: 1200 NSRLSFDAK 1208
NSRLS K
Sbjct: 101 NSRLSCQIK 109
>pdb|3AH7|A Chain A, Crystal Structure Of The Isc-Like [2fe-2s] Ferredoxin (Fdxb)
From Pseudomonas Putida Jcm 20004
Length = 113
Score = 58.5 bits (140), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 2538 GISLCDALLKNSIFIEHACEKSCACATCHVIIREGFNEINKANEVEEDMLNKAWGLEENS 2597
G ++ + + I +E AC AC TCH I+R+GF+ + +A+E+EEDML+KAWGLE S
Sbjct: 24 GTNILELAHDHHIEMESACGGVKACTTCHCIVRKGFDSLEEADELEEDMLDKAWGLEAQS 83
Query: 2598 RLSCQ 2602
RL CQ
Sbjct: 84 RLGCQ 88
Score = 53.1 bits (126), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 1142 GISLCDALLKNSIFIEHACEKSCACATCHVIIREGFNEINKANEVEEDMLNKAWGLEENS 1201
G ++ + + I +E AC AC TCH I+R+GF+ + +A+E+EEDML+KAWGLE S
Sbjct: 24 GTNILELAHDHHIEMESACGGVKACTTCHCIVRKGFDSLEEADELEEDMLDKAWGLEAQS 83
Query: 1202 RL 1203
RL
Sbjct: 84 RL 85
>pdb|1FPO|A Chain A, Hsc20 (Hscb), A J-Type Co-Chaperone From E. Coli
pdb|1FPO|B Chain B, Hsc20 (Hscb), A J-Type Co-Chaperone From E. Coli
pdb|1FPO|C Chain C, Hsc20 (Hscb), A J-Type Co-Chaperone From E. Coli
Length = 171
Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 51/89 (57%)
Query: 536 YFNDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGIDLNTKLNLNFSHD 595
Y D F S+ +Q A+V+ S +N+A+ L+ P +R+ YL L+G DL ++ +
Sbjct: 31 YHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTA 90
Query: 596 FLEQQMKWRETLSIIKNKKDKVKFMALLQ 624
FL +Q++ RE L I+ KD+ + + ++
Sbjct: 91 FLMEQLELREELDEIEQAKDEARLESFIK 119
Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 51/89 (57%)
Query: 1932 YFNDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGIDLNTKLNLNFSHD 1991
Y D F S+ +Q A+V+ S +N+A+ L+ P +R+ YL L+G DL ++ +
Sbjct: 31 YHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTA 90
Query: 1992 FLEQQMKWRETLSIIKNKKDKVKFMALLQ 2020
FL +Q++ RE L I+ KD+ + + ++
Sbjct: 91 FLMEQLELREELDEIEQAKDEARLESFIK 119
>pdb|2BT6|A Chain A, Ru(Bpy)2(Mbpy)-Modified Bovine Adrenodoxin
pdb|2BT6|B Chain B, Ru(Bpy)2(Mbpy)-Modified Bovine Adrenodoxin
Length = 108
Score = 55.1 bits (131), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 2594
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 26 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 85
Query: 2595 ENSRLSCQ 2602
+ SRL CQ
Sbjct: 86 DRSRLGCQ 93
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 1142 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 1198
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 26 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 85
Query: 1199 ENSRL 1203
+ SRL
Sbjct: 86 DRSRL 90
>pdb|1AYF|A Chain A, Bovine Adrenodoxin (oxidized)
pdb|1AYF|B Chain B, Bovine Adrenodoxin (oxidized)
Length = 105
Score = 55.1 bits (131), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 2594
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 23 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 82
Query: 2595 ENSRLSCQ 2602
+ SRL CQ
Sbjct: 83 DRSRLGCQ 90
Score = 49.3 bits (116), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 1142 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 1198
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 23 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 82
Query: 1199 ENSRL 1203
+ SRL
Sbjct: 83 DRSRL 87
>pdb|2JQR|B Chain B, Solution Model Of Crosslinked Complex Of Cytochrome C And
Adrenodoxin
Length = 105
Score = 54.7 bits (130), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 2594
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 23 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDCAYGLT 82
Query: 2595 ENSRLSCQ 2602
+ SRL CQ
Sbjct: 83 DRSRLGCQ 90
Score = 49.3 bits (116), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 1142 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 1198
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 23 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDCAYGLT 82
Query: 1199 ENSRL 1203
+ SRL
Sbjct: 83 DRSRL 87
>pdb|1CJE|A Chain A, Adrenodoxin From Bovine
pdb|1CJE|B Chain B, Adrenodoxin From Bovine
pdb|1CJE|C Chain C, Adrenodoxin From Bovine
pdb|1CJE|D Chain D, Adrenodoxin From Bovine
Length = 127
Score = 54.7 bits (130), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 2594
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 25 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 84
Query: 2595 ENSRLSCQ 2602
+ SRL CQ
Sbjct: 85 DRSRLGCQ 92
Score = 50.4 bits (119), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 14/110 (12%)
Query: 1142 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 1198
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 25 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 84
Query: 1199 ENSRLSFDAKRGKIC-TRIMRELRVAINFGNNPDTNIKLRLAIEKALDAN 1247
+ SRL +IC T+ M + V + PD R +I+ ++++
Sbjct: 85 DRSRLGC-----QICLTKAMDNMTVRV-----PDAVSDARESIDMGMNSS 124
>pdb|1L6U|A Chain A, Nmr Structure Of Oxidized Adrenodoxin
Length = 128
Score = 54.7 bits (130), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 2594
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 26 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 85
Query: 2595 ENSRLSCQ 2602
+ SRL CQ
Sbjct: 86 DRSRLGCQ 93
Score = 50.4 bits (119), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 14/110 (12%)
Query: 1142 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 1198
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 26 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 85
Query: 1199 ENSRLSFDAKRGKIC-TRIMRELRVAINFGNNPDTNIKLRLAIEKALDAN 1247
+ SRL +IC T+ M + V + PD R +I+ ++++
Sbjct: 86 DRSRLGC-----QICLTKAMDNMTVRV-----PDAVSDARESIDMGMNSS 125
>pdb|1E6E|B Chain B, Adrenodoxin ReductaseADRENODOXIN COMPLEX OF MITOCHONDRIAL
P450 Systems
pdb|1E6E|D Chain D, Adrenodoxin ReductaseADRENODOXIN COMPLEX OF MITOCHONDRIAL
P450 Systems
Length = 128
Score = 54.7 bits (130), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 2594
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 26 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 85
Query: 2595 ENSRLSCQ 2602
+ SRL CQ
Sbjct: 86 DRSRLGCQ 93
Score = 50.4 bits (119), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 14/110 (12%)
Query: 1142 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 1198
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 26 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 85
Query: 1199 ENSRLSFDAKRGKIC-TRIMRELRVAINFGNNPDTNIKLRLAIEKALDAN 1247
+ SRL +IC T+ M + V + PD R +I+ ++++
Sbjct: 86 DRSRLGC-----QICLTKAMDNMTVRV-----PDAVSDARESIDMGMNSS 125
>pdb|1L6V|A Chain A, Structure Of Reduced Bovine Adrenodoxin
Length = 128
Score = 54.7 bits (130), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 2594
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 26 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 85
Query: 2595 ENSRLSCQ 2602
+ SRL CQ
Sbjct: 86 DRSRLGCQ 93
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 14/110 (12%)
Query: 1142 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 1198
G SL D +++N++ I+ ACE + AC+TCH+I + F ++ + E DML+ A+GL
Sbjct: 26 GDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 85
Query: 1199 ENSRLSFDAKRGKIC-TRIMRELRVAINFGNNPDTNIKLRLAIEKALDAN 1247
+ SRL +IC T+ M + V + PD R +I+ ++++
Sbjct: 86 DRSRLGC-----QICLTKAMDNMTVRV-----PDAVSDARESIDMGMNSS 125
>pdb|3NA0|C Chain C, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|D Chain D, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 68
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 2540 SLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLEEN 2596
SL D +++N++ I+ ACE + AC+TCH+I + + +++ + E DML+ A+GL +
Sbjct: 1 SLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAYGLTDR 60
Query: 2597 SRLSCQ 2602
SRL CQ
Sbjct: 61 SRLGCQ 66
Score = 48.5 bits (114), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 1144 SLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLEEN 1200
SL D +++N++ I+ ACE + AC+TCH+I + + +++ + E DML+ A+GL +
Sbjct: 1 SLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAYGLTDR 60
Query: 1201 SRL 1203
SRL
Sbjct: 61 SRL 63
>pdb|3N9Y|C Chain C, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|D Chain D, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
Length = 114
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 2594
G SL D +++N++ I+ ACE + AC+TCH+I + + +++ + E DML+ A+GL
Sbjct: 25 GDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAYGLT 84
Query: 2595 ENSRLSCQ 2602
+ SRL CQ
Sbjct: 85 DRSRLGCQ 92
Score = 48.5 bits (114), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 1142 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 1198
G SL D +++N++ I+ ACE + AC+TCH+I + + +++ + E DML+ A+GL
Sbjct: 25 GDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAYGLT 84
Query: 1199 ENSRL 1203
+ SRL
Sbjct: 85 DRSRL 89
>pdb|3N9Z|C Chain C, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|D Chain D, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|C Chain C, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|D Chain D, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 123
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 2594
G SL D +++N++ I+ ACE + AC+TCH+I + + +++ + E DML+ A+GL
Sbjct: 25 GDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAYGLT 84
Query: 2595 ENSRLSCQ 2602
+ SRL CQ
Sbjct: 85 DRSRLGCQ 92
Score = 48.5 bits (114), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 14/104 (13%)
Query: 1142 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 1198
G SL D +++N++ I+ ACE + AC+TCH+I + + +++ + E DML+ A+GL
Sbjct: 25 GDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAYGLT 84
Query: 1199 ENSRLSFDAKRGKIC-TRIMRELRVAINFGNNPDTNIKLRLAIE 1241
+ SRL +IC T+ M + V + P+T R +I+
Sbjct: 85 DRSRLGC-----QICLTKSMDNMTVRV-----PETVADARQSID 118
>pdb|3P1M|A Chain A, Crystal Structure Of Human Ferredoxin-1 (Fdx1) In Complex
With Iron- Sulfur Cluster
pdb|3P1M|B Chain B, Crystal Structure Of Human Ferredoxin-1 (Fdx1) In Complex
With Iron- Sulfur Cluster
pdb|3P1M|C Chain C, Crystal Structure Of Human Ferredoxin-1 (Fdx1) In Complex
With Iron- Sulfur Cluster
pdb|3P1M|D Chain D, Crystal Structure Of Human Ferredoxin-1 (Fdx1) In Complex
With Iron- Sulfur Cluster
pdb|3P1M|E Chain E, Crystal Structure Of Human Ferredoxin-1 (Fdx1) In Complex
With Iron- Sulfur Cluster
pdb|3P1M|F Chain F, Crystal Structure Of Human Ferredoxin-1 (Fdx1) In Complex
With Iron- Sulfur Cluster
pdb|3P1M|G Chain G, Crystal Structure Of Human Ferredoxin-1 (Fdx1) In Complex
With Iron- Sulfur Cluster
pdb|3P1M|H Chain H, Crystal Structure Of Human Ferredoxin-1 (Fdx1) In Complex
With Iron- Sulfur Cluster
Length = 132
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 2594
G SL D +++N++ I+ ACE + AC+TCH+I + + +++ + E DML+ A+GL
Sbjct: 27 GDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAYGLT 86
Query: 2595 ENSRLSCQ 2602
+ SRL CQ
Sbjct: 87 DRSRLGCQ 94
Score = 48.5 bits (114), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 14/104 (13%)
Query: 1142 GISLCDALLKNSIFIEH--ACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLE 1198
G SL D +++N++ I+ ACE + AC+TCH+I + + +++ + E DML+ A+GL
Sbjct: 27 GDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAYGLT 86
Query: 1199 ENSRLSFDAKRGKIC-TRIMRELRVAINFGNNPDTNIKLRLAIE 1241
+ SRL +IC T+ M + V + P+T R +I+
Sbjct: 87 DRSRLGC-----QICLTKSMDNMTVRV-----PETVADARQSID 120
>pdb|2Y5C|A Chain A, Structure Of Human Ferredoxin 2 (Fdx2)in Complex With 2fe2s
Cluster
pdb|2Y5C|B Chain B, Structure Of Human Ferredoxin 2 (Fdx2)in Complex With 2fe2s
Cluster
Length = 109
Score = 53.1 bits (126), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 2547 KNSIFIEHACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLEENSRLSCQ 2602
++ + +E ACE S AC+TCHV + E + + E E+DML+ A L+ENSRL CQ
Sbjct: 34 RHGVDLEGACEASLACSTCHVYVSEDHLDLLPPPEEREDDMLDMAPLLQENSRLGCQ 90
Score = 47.8 bits (112), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 1151 KNSIFIEHACEKSCACATCHVIIREG-FNEINKANEVEEDMLNKAWGLEENSRL 1203
++ + +E ACE S AC+TCHV + E + + E E+DML+ A L+ENSRL
Sbjct: 34 RHGVDLEGACEASLACSTCHVYVSEDHLDLLPPPEEREDDMLDMAPLLQENSRL 87
>pdb|1OQQ|A Chain A, Crystal Structure Of C73sC85S MUTANT OF PUTIDAREDOXIN, A
[2FE-2s] Ferredoxin From Pseudomonas Putida, At 1.47a
Resolution
pdb|1OQQ|B Chain B, Crystal Structure Of C73sC85S MUTANT OF PUTIDAREDOXIN, A
[2FE-2s] Ferredoxin From Pseudomonas Putida, At 1.47a
Resolution
pdb|1XLN|A Chain A, Crystal Structure Of Oxidized C73sC85S PUTIDAREDOXIN, A
[2fe-2s] Ferredoxin From Pseudomonas Putida
pdb|1XLN|B Chain B, Crystal Structure Of Oxidized C73sC85S PUTIDAREDOXIN, A
[2fe-2s] Ferredoxin From Pseudomonas Putida
pdb|1XLO|A Chain A, Structure Of Reduced C73s/c85s Putidaredoxin, A [2fe-2s]
Ferredoxin From Pseudomonas Putida
pdb|1XLO|B Chain B, Structure Of Reduced C73s/c85s Putidaredoxin, A [2fe-2s]
Ferredoxin From Pseudomonas Putida
pdb|3LB8|C Chain C, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
pdb|3LB8|D Chain D, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
Length = 106
Score = 52.4 bits (124), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 2594
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELK 79
Query: 2595 ENSRLSCQ 2602
NSRLSCQ
Sbjct: 80 PNSRLSCQ 87
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1142 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 1198
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELK 79
Query: 1199 ENSRLS 1204
NSRLS
Sbjct: 80 PNSRLS 85
>pdb|1SU0|B Chain B, Crystal Structure Of A Hypothetical Protein At 2.3 A
Resolution
Length = 159
Score = 51.2 bits (121), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 363 IKLLKMKEFFMSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKN 422
+ L K+ +M+ V DH + P + G + V + P CGDV+ L +K +++
Sbjct: 1 MALSKLNHLYMAV---VADHSKRPHHHGQLDG----VEAVQLNNPTCGDVISLTVKFDED 53
Query: 423 GVITDAKFKTYGCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEELV 470
I D F GC + ASSS++T+ V GK+ +EA+++ DI E+V
Sbjct: 54 K-IEDIAFAGNGCTISTASSSMMTDAVIGKSKEEALAL--ADIFSEMV 98
Score = 51.2 bits (121), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 1759 IKLLKMKEFFMSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKN 1818
+ L K+ +M+ V DH + P + G + V + P CGDV+ L +K +++
Sbjct: 1 MALSKLNHLYMAV---VADHSKRPHHHGQLDG----VEAVQLNNPTCGDVISLTVKFDED 53
Query: 1819 GVITDAKFKTYGCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEELV 1866
I D F GC + ASSS++T+ V GK+ +EA+++ DI E+V
Sbjct: 54 K-IEDIAFAGNGCTISTASSSMMTDAVIGKSKEEALAL--ADIFSEMV 98
>pdb|1GPX|A Chain A, C85s Gapdx, Nmr, 20 Structures
Length = 106
Score = 51.2 bits (121), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 2594
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLECVTAELK 79
Query: 2595 ENSRLSCQ 2602
NSRLSCQ
Sbjct: 80 PNSRLSCQ 87
Score = 45.1 bits (105), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1142 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 1198
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLECVTAELK 79
Query: 1199 ENSRLS 1204
NSRLS
Sbjct: 80 PNSRLS 85
>pdb|1OQR|A Chain A, Crystal Structure Of C73s Mutant Of Putidaredoxin, A [2fe-
2s] Ferredoxin From Pseudomonas Putida, At 1.65a
Resolution
pdb|1OQR|B Chain B, Crystal Structure Of C73s Mutant Of Putidaredoxin, A [2fe-
2s] Ferredoxin From Pseudomonas Putida, At 1.65a
Resolution
pdb|1OQR|C Chain C, Crystal Structure Of C73s Mutant Of Putidaredoxin, A [2fe-
2s] Ferredoxin From Pseudomonas Putida, At 1.65a
Resolution
pdb|1XLP|A Chain A, Structure Of Oxidized C73s Putidaredoxin From Pseudomonas
Putida
pdb|1XLP|B Chain B, Structure Of Oxidized C73s Putidaredoxin From Pseudomonas
Putida
pdb|1XLP|C Chain C, Structure Of Oxidized C73s Putidaredoxin From Pseudomonas
Putida
pdb|1XLQ|A Chain A, Crystal Structure Of Reduced C73s Putidaredoxin From
Pseudomonas Putida
pdb|1XLQ|B Chain B, Crystal Structure Of Reduced C73s Putidaredoxin From
Pseudomonas Putida
pdb|1XLQ|C Chain C, Crystal Structure Of Reduced C73s Putidaredoxin From
Pseudomonas Putida
Length = 106
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 2594
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELK 79
Query: 2595 ENSRLSCQ 2602
NSRL CQ
Sbjct: 80 PNSRLCCQ 87
Score = 44.7 bits (104), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 1142 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 1198
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELK 79
Query: 1199 ENSRL 1203
NSRL
Sbjct: 80 PNSRL 84
>pdb|1R7S|A Chain A, Putidaredoxin (Fe2s2 Ferredoxin), C73g Mutant
pdb|1R7S|B Chain B, Putidaredoxin (Fe2s2 Ferredoxin), C73g Mutant
pdb|1R7S|C Chain C, Putidaredoxin (Fe2s2 Ferredoxin), C73g Mutant
Length = 106
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 2594
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLEGVTAELK 79
Query: 2595 ENSRLSCQ 2602
NSRL CQ
Sbjct: 80 PNSRLCCQ 87
Score = 44.3 bits (103), Expect = 0.001, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 1142 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 1198
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLEGVTAELK 79
Query: 1199 ENSRL 1203
NSRL
Sbjct: 80 PNSRL 84
>pdb|2D2A|A Chain A, Crystal Structure Of Escherichia Coli Sufa Involved In
Biosynthesis Of Iron-Sulfur Clusters
pdb|2D2A|B Chain B, Crystal Structure Of Escherichia Coli Sufa Involved In
Biosynthesis Of Iron-Sulfur Clusters
Length = 145
Score = 49.3 bits (116), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 470 VTKKAAKYINKYIQKRGKGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIFI 529
+T AA +I + + K+ +G+RLGV GC+G Y L+ V E K+D +F+ +G ++F+
Sbjct: 43 LTPAAAIHIRELVAKQPGMVGVRLGVKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFV 102
Score = 49.3 bits (116), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 1866 VTKKAAKYINKYIQKRGKGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIFI 1925
+T AA +I + + K+ +G+RLGV GC+G Y L+ V E K+D +F+ +G ++F+
Sbjct: 43 LTPAAAIHIRELVAKQPGMVGVRLGVKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFV 102
>pdb|1PUT|A Chain A, An Nmr-Derived Model For The Solution Structure Of Oxidized
Putidaredoxin, A 2fe, 2-S Ferredoxin From Pseudomonas
Length = 106
Score = 48.9 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 2594
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLECVTAELK 79
Query: 2595 ENSRLSCQ 2602
NSRL CQ
Sbjct: 80 PNSRLCCQ 87
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 1142 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 1198
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLECVTAELK 79
Query: 1199 ENSRL 1203
NSRL
Sbjct: 80 PNSRL 84
>pdb|1PDX|A Chain A, Putidaredoxin
pdb|1YJI|A Chain A, Rdc-Refined Solution Nmr Structure Of Reduced Putidaredoxin
pdb|1YJJ|A Chain A, Rdc-Refined Solution Nmr Structure Of Oxidized Putidaredoxin
Length = 106
Score = 48.9 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 2538 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 2594
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLECVTAELK 79
Query: 2595 ENSRLSCQ 2602
NSRL CQ
Sbjct: 80 PNSRLCCQ 87
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 1142 GISLCDALLKNSIF-IEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWG-LE 1198
G+SL A + N I+ I C S +CATCHV + E F +++ ANE E ML L+
Sbjct: 20 GVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLECVTAELK 79
Query: 1199 ENSRL 1203
NSRL
Sbjct: 80 PNSRL 84
>pdb|3CAI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Rv3778c
Protein
pdb|3CAI|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Rv3778c
Protein
Length = 406
Score = 47.8 bits (112), Expect = 8e-05, Method: Composition-based stats.
Identities = 72/344 (20%), Positives = 151/344 (43%), Gaps = 32/344 (9%)
Query: 43 IEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK-RGKHIITVQTEHKS-VL 100
++ AR VA L+ ADP ++ GA + L++ A + G +I + + ++ +
Sbjct: 71 LDAAREAVADLVNADPGGVVL--GADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIA 128
Query: 101 DSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIG 159
+R G +V + + G + Q E I T LV+V + +G + + +
Sbjct: 129 PWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMT 188
Query: 160 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR-------- 211
+L G + D + A ++I+ D+++ +AH GP IGA+ R
Sbjct: 189 KLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPSVMNSF 247
Query: 212 ----RNPRTRIEAQIHGGGHEYGLRSGTLATHQ-IVGMGEAFRLARIE-MKEELKRILFL 265
NP A++ G H++GL +G +A+ + + + E+ R +R E + ++
Sbjct: 248 GSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAY 307
Query: 266 QKRLYNGLMESIEE---IYINGDMNNRIPHNLNISFNFIEGESLLMAIKDIAVSSGSACT 322
R+++ LM S+ + + G +IP ++ + + + + ++ + D +
Sbjct: 308 LNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHKVPADRVVQRLAD------NGIL 360
Query: 323 SASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLL 366
+ + S VL LG ND ++ + ++T E+D ++ L
Sbjct: 361 AIANTGSRVLDVLGVND--VGGAVTVGLAHYSTMAEVDQLVRAL 402
Score = 47.8 bits (112), Expect = 8e-05, Method: Composition-based stats.
Identities = 72/344 (20%), Positives = 151/344 (43%), Gaps = 32/344 (9%)
Query: 1439 IEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK-RGKHIITVQTEHKS-VL 1496
++ AR VA L+ ADP ++ GA + L++ A + G +I + + ++ +
Sbjct: 71 LDAAREAVADLVNADPGGVVL--GADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIA 128
Query: 1497 DSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIG 1555
+R G +V + + G + Q E I T LV+V + +G + + +
Sbjct: 129 PWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMT 188
Query: 1556 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR-------- 1607
+L G + D + A ++I+ D+++ +AH GP IGA+ R
Sbjct: 189 KLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPSVMNSF 247
Query: 1608 ----RNPRTRIEAQIHGGGHEYGLRSGTLATHQ-IVGMGEAFRLARIE-MKEELKRILFL 1661
NP A++ G H++GL +G +A+ + + + E+ R +R E + ++
Sbjct: 248 GSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAY 307
Query: 1662 QKRLYNGLMESIEE---IYINGDMNNRIPHNLNISFNFIEGESLLMAIKDIAVSSGSACT 1718
R+++ LM S+ + + G +IP ++ + + + + ++ + D +
Sbjct: 308 LNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHKVPADRVVQRLAD------NGIL 360
Query: 1719 SASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLL 1762
+ + S VL LG ND ++ + ++T E+D ++ L
Sbjct: 361 AIANTGSRVLDVLGVND--VGGAVTVGLAHYSTMAEVDQLVRAL 402
>pdb|1ELQ|A Chain A, Crystal Structure Of The Cystine C-S Lyase C-Des
pdb|1ELQ|B Chain B, Crystal Structure Of The Cystine C-S Lyase C-Des
pdb|1ELU|A Chain A, Complex Between The Cystine C-S Lyase C-Des And Its
Reaction Product Cysteine Persulfide.
pdb|1ELU|B Chain B, Complex Between The Cystine C-S Lyase C-Des And Its
Reaction Product Cysteine Persulfide
Length = 390
Score = 47.0 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 29 ASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88
A+ HI ++ I + R +A+ DP I T T ++ + G +G
Sbjct: 52 AANQHI-----QQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDW---HQGDE 103
Query: 89 IITVQTEHKSVLDSIRKLENDGFRVTY--------LKPKNNGLITLSQLEEKICSDTILV 140
I+ EH ++ ++ + F +TY L + + + L K + +++
Sbjct: 104 ILLTDCEHPGIIAIVQAIAAR-FGITYRFFPVAATLNQGDAAAVLANHLGPK--TRLVIL 160
Query: 141 SVMLVNNEIGVIQPILEIGELCRSKG----VIFHCDAAQAVGKIDINIQNYKVDLMSFSA 196
S +L N G + P+ EI +CR V D AQ+ G + ++ +VD +F+
Sbjct: 161 SHLLWNT--GQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTG 218
Query: 197 HKIY-GPKGIGALYI 210
HK + GP G+G LYI
Sbjct: 219 HKWFAGPAGVGGLYI 233
Score = 47.0 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 1425 ASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 1484
A+ HI ++ I + R +A+ DP I T T ++ + G +G
Sbjct: 52 AANQHI-----QQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDW---HQGDE 103
Query: 1485 IITVQTEHKSVLDSIRKLENDGFRVTY--------LKPKNNGLITLSQLEEKICSDTILV 1536
I+ EH ++ ++ + F +TY L + + + L K + +++
Sbjct: 104 ILLTDCEHPGIIAIVQAIAAR-FGITYRFFPVAATLNQGDAAAVLANHLGPK--TRLVIL 160
Query: 1537 SVMLVNNEIGVIQPILEIGELCRSKG----VIFHCDAAQAVGKIDINIQNYKVDLMSFSA 1592
S +L N G + P+ EI +CR V D AQ+ G + ++ +VD +F+
Sbjct: 161 SHLLWNT--GQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTG 218
Query: 1593 HKIY-GPKGIGALYI 1606
HK + GP G+G LYI
Sbjct: 219 HKWFAGPAGVGGLYI 233
>pdb|3BVO|A Chain A, Crystal Structure Of Human Co-Chaperone Protein Hscb
pdb|3BVO|B Chain B, Crystal Structure Of Human Co-Chaperone Protein Hscb
Length = 207
Score = 45.8 bits (107), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 539 DNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGIDLNTKLNLNFSHDFL 597
D F Q+S+ ++D S K ST +N AY L P R +YL KL+GI++ + + FL
Sbjct: 76 DFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEIPERTDYEXDRQFL 134
Score = 45.8 bits (107), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 1935 DNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGIDLNTKLNLNFSHDFL 1993
D F Q+S+ ++D S K ST +N AY L P R +YL KL+GI++ + + FL
Sbjct: 76 DFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEIPERTDYEXDRQFL 134
>pdb|1N2T|A Chain A, C-Des Mutant K223a With Gly Covalenty Linked To The
Plp-Cofactor
pdb|1N2T|B Chain B, C-Des Mutant K223a With Gly Covalenty Linked To The
Plp-Cofactor
pdb|1N31|A Chain A, Structure Of A Catalytically Inactive Mutant (K223a) Of
C-Des With A Substrate (Cystine) Linked To The Co-Factor
pdb|1N31|B Chain B, Structure Of A Catalytically Inactive Mutant (K223a) Of
C-Des With A Substrate (Cystine) Linked To The Co-Factor
Length = 386
Score = 45.1 bits (105), Expect = 6e-04, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 29 ASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88
A+ HI ++ I + R +A+ DP I T T ++ + G +G
Sbjct: 48 AANQHI-----QQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDW---HQGDE 99
Query: 89 IITVQTEHKSVLDSIRKLENDGFRVTY--------LKPKNNGLITLSQLEEKICSDTILV 140
I+ EH ++ ++ + F +TY L + + + L K + +++
Sbjct: 100 ILLTDCEHPGIIAIVQAIAAR-FGITYRFFPVAATLNQGDAAAVLANHLGPK--TRLVIL 156
Query: 141 SVMLVNNEIGVIQPILEIGELCRSKG----VIFHCDAAQAVGKIDINIQNYKVDLMSFSA 196
S +L N G + P+ EI +CR V D AQ+ G + ++ +VD +F+
Sbjct: 157 SHLLWNT--GQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTG 214
Query: 197 HKIY-GPKGIGALYI 210
H + GP G+G LYI
Sbjct: 215 HAWFAGPAGVGGLYI 229
Score = 45.1 bits (105), Expect = 6e-04, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 1425 ASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 1484
A+ HI ++ I + R +A+ DP I T T ++ + G +G
Sbjct: 48 AANQHI-----QQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDW---HQGDE 99
Query: 1485 IITVQTEHKSVLDSIRKLENDGFRVTY--------LKPKNNGLITLSQLEEKICSDTILV 1536
I+ EH ++ ++ + F +TY L + + + L K + +++
Sbjct: 100 ILLTDCEHPGIIAIVQAIAAR-FGITYRFFPVAATLNQGDAAAVLANHLGPK--TRLVIL 156
Query: 1537 SVMLVNNEIGVIQPILEIGELCRSKG----VIFHCDAAQAVGKIDINIQNYKVDLMSFSA 1592
S +L N G + P+ EI +CR V D AQ+ G + ++ +VD +F+
Sbjct: 157 SHLLWNT--GQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTG 214
Query: 1593 HKIY-GPKGIGALYI 1606
H + GP G+G LYI
Sbjct: 215 HAWFAGPAGVGGLYI 229
>pdb|4IT5|A Chain A, Chaperone Hscb From Vibrio Cholerae
pdb|4IT5|B Chain B, Chaperone Hscb From Vibrio Cholerae
pdb|4IT5|C Chain C, Chaperone Hscb From Vibrio Cholerae
pdb|4IT5|D Chain D, Chaperone Hscb From Vibrio Cholerae
Length = 174
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 539 DNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGIDLNTK 587
DNF S+ D+ +V+ + +N AY LKDP R+ YL L GI+ N +
Sbjct: 37 DNFATASERDRLXAVQQAAQINDAYQTLKDPLRRAEYLLSLQGIEXNAE 85
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 1935 DNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGIDLNTK 1983
DNF S+ D+ +V+ + +N AY LKDP R+ YL L GI+ N +
Sbjct: 37 DNFATASERDRLXAVQQAAQINDAYQTLKDPLRRAEYLLSLQGIEXNAE 85
>pdb|2CH1|A Chain A, Structure Of Anopheles Gambiae 3-Hydroxykynurenine
Transaminase
pdb|2CH1|B Chain B, Structure Of Anopheles Gambiae 3-Hydroxykynurenine
Transaminase
pdb|2CH1|C Chain C, Structure Of Anopheles Gambiae 3-Hydroxykynurenine
Transaminase
pdb|2CH1|D Chain D, Structure Of Anopheles Gambiae 3-Hydroxykynurenine
Transaminase
pdb|2CH2|A Chain A, Structure Of The Anopheles Gambiae 3-Hydroxykynurenine
Transaminase In Complex With Inhibitor
pdb|2CH2|B Chain B, Structure Of The Anopheles Gambiae 3-Hydroxykynurenine
Transaminase In Complex With Inhibitor
pdb|2CH2|C Chain C, Structure Of The Anopheles Gambiae 3-Hydroxykynurenine
Transaminase In Complex With Inhibitor
pdb|2CH2|D Chain D, Structure Of The Anopheles Gambiae 3-Hydroxykynurenine
Transaminase In Complex With Inhibitor
Length = 396
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 150 GVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKGIG-- 206
G++QP+ +G++C + DA ++ + + +++D + A K+ G P GI
Sbjct: 157 GLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPI 216
Query: 207 -----ALYIRRNPRTR---------IEAQIHGGGHEYGLRSGTLATHQIVGMGEAF-RLA 251
AL + RN RT+ + G E T+A++ I + EA ++A
Sbjct: 217 SISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIA 276
Query: 252 RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIP 291
++ ++KR + + LY GL + +I++ D +R+P
Sbjct: 277 EEGLENQIKRRIECAQILYEGLGKMGLDIFVK-DPRHRLP 315
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 1546 GVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKGIG-- 1602
G++QP+ +G++C + DA ++ + + +++D + A K+ G P GI
Sbjct: 157 GLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPI 216
Query: 1603 -----ALYIRRNPRTR---------IEAQIHGGGHEYGLRSGTLATHQIVGMGEAF-RLA 1647
AL + RN RT+ + G E T+A++ I + EA ++A
Sbjct: 217 SISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIA 276
Query: 1648 RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIP 1687
++ ++KR + + LY GL + +I++ D +R+P
Sbjct: 277 EEGLENQIKRRIECAQILYEGLGKMGLDIFVK-DPRHRLP 315
>pdb|3KGX|A Chain A, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.80 A Resolution
pdb|3KGX|B Chain B, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.80 A Resolution
pdb|3KGW|A Chain A, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.65 A Resolution
pdb|3KGW|B Chain B, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.65 A Resolution
Length = 393
Score = 41.2 bits (95), Expect = 0.007, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 110 GFRVTYLKPKNNGLITLSQLEEKICSDT-ILVSVMLVNNEIGVIQPILEIGELCRSKGVI 168
G RV + K TL ++EE + +L+ ++ + GV+QP+ GELC +
Sbjct: 121 GARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCL 180
Query: 169 FHCDAAQAVGKIDINIQNYKVDLMSFSAHKIY-GPKGIGALYIRRNPRTRIEAQ 221
D+ ++G + I + +D+M S+ K+ P GI + + ++ ++
Sbjct: 181 LLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSR 234
Score = 41.2 bits (95), Expect = 0.007, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 1506 GFRVTYLKPKNNGLITLSQLEEKICSDT-ILVSVMLVNNEIGVIQPILEIGELCRSKGVI 1564
G RV + K TL ++EE + +L+ ++ + GV+QP+ GELC +
Sbjct: 121 GARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCL 180
Query: 1565 FHCDAAQAVGKIDINIQNYKVDLMSFSAHKIY-GPKGIGALYIRRNPRTRIEAQ 1617
D+ ++G + I + +D+M S+ K+ P GI + + ++ ++
Sbjct: 181 LLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSR 234
>pdb|1NWB|A Chain A, Solution Nmr Structure Of Protein Aq_1857 From Aquifex
Aeolicus: Northeast Structural Genomics Consortium
Target Qr6
Length = 124
Score = 40.8 bits (94), Expect = 0.010, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 470 VTKKAAKYINKYIQKRG-KGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIF 528
VT KA + I K Q+ + LR+ V GCSG Y + + D + D VF+ +GV++
Sbjct: 12 VTDKAVEEIKKVAQENNIENPILRIRVVPGGCSGFQYAMGFDDTVEEGDHVFEYDGVKVV 71
Query: 529 INEKDLLYFN 538
I+ + Y N
Sbjct: 72 IDPFSMPYVN 81
Score = 40.8 bits (94), Expect = 0.010, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 1866 VTKKAAKYINKYIQKRG-KGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIF 1924
VT KA + I K Q+ + LR+ V GCSG Y + + D + D VF+ +GV++
Sbjct: 12 VTDKAVEEIKKVAQENNIENPILRIRVVPGGCSGFQYAMGFDDTVEEGDHVFEYDGVKVV 71
Query: 1925 INEKDLLYFN 1934
I+ + Y N
Sbjct: 72 IDPFSMPYVN 81
>pdb|1JCE|A Chain A, Mreb From Thermotoga Maritima
Length = 344
Score = 40.4 bits (93), Expect = 0.014, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 745 ISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTS 804
+ + FI K N R+ VI VP D++R+ +A AG + + L+ EP +
Sbjct: 78 VXLRYFINKAKGGXNLFKPRV---VIGVPIGITDVERRAILDAGLEAGASKVFLIEEPXA 134
Query: 805 AAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGV-FKVLSVGGD 850
AAI L+ G V D+GGGT +++++ + V ++ + + GD
Sbjct: 135 AAIGSNLNVEEPSG-NXVVDIGGGTTEVAVISLGSIVTWESIRIAGD 180
Score = 40.4 bits (93), Expect = 0.014, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 2141 ISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTS 2200
+ + FI K N R+ VI VP D++R+ +A AG + + L+ EP +
Sbjct: 78 VXLRYFINKAKGGXNLFKPRV---VIGVPIGITDVERRAILDAGLEAGASKVFLIEEPXA 134
Query: 2201 AAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGV-FKVLSVGGD 2246
AAI L+ G V D+GGGT +++++ + V ++ + + GD
Sbjct: 135 AAIGSNLNVEEPSG-NXVVDIGGGTTEVAVISLGSIVTWESIRIAGD 180
>pdb|1JCF|A Chain A, Mreb From Thermotoga Maritima, Trigonal
pdb|1JCG|A Chain A, Mreb From Thermotoga Maritima, Amppnp
pdb|2WUS|A Chain A, Bacterial Actin Mreb Assembles In Complex With Cell Shape
Protein Rodz
pdb|2WUS|B Chain B, Bacterial Actin Mreb Assembles In Complex With Cell Shape
Protein Rodz
Length = 344
Score = 40.0 bits (92), Expect = 0.016, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 750 FITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAY 809
FI K N R+ VI VP D++R+ +A AG + + L+ EP +AAI
Sbjct: 83 FINKAKGGMNLFKPRV---VIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGS 139
Query: 810 KLDKNIFEGIFAVYDLGGGTFDISILKFKNGV-FKVLSVGGD 850
L+ G V D+GGGT +++++ + V ++ + + GD
Sbjct: 140 NLNVEEPSGNMVV-DIGGGTTEVAVISLGSIVTWESIRIAGD 180
Score = 40.0 bits (92), Expect = 0.016, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 2146 FITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAY 2205
FI K N R+ VI VP D++R+ +A AG + + L+ EP +AAI
Sbjct: 83 FINKAKGGMNLFKPRV---VIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGS 139
Query: 2206 KLDKNIFEGIFAVYDLGGGTFDISILKFKNGV-FKVLSVGGD 2246
L+ G V D+GGGT +++++ + V ++ + + GD
Sbjct: 140 NLNVEEPSGNMVV-DIGGGTTEVAVISLGSIVTWESIRIAGD 180
>pdb|3LXF|A Chain A, Crystal Structure Of [2fe-2s] Ferredoxin Arx From
Novosphingobium Aromaticivorans
pdb|3LXF|B Chain B, Crystal Structure Of [2fe-2s] Ferredoxin Arx From
Novosphingobium Aromaticivorans
pdb|3LXF|C Chain C, Crystal Structure Of [2fe-2s] Ferredoxin Arx From
Novosphingobium Aromaticivorans
pdb|3LXF|D Chain D, Crystal Structure Of [2fe-2s] Ferredoxin Arx From
Novosphingobium Aromaticivorans
pdb|3LXF|E Chain E, Crystal Structure Of [2fe-2s] Ferredoxin Arx From
Novosphingobium Aromaticivorans
Length = 104
Score = 40.0 bits (92), Expect = 0.017, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 2538 GISLCDALLKNSI-FIEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWGLEE 2595
G+SL +AL I + C C+CATCHV++ F + + + E D+L+ +
Sbjct: 20 GLSLMEALRDAGIDELLALCGGCCSCATCHVLVAPAFADRLPALSGDENDLLDSSDHRTP 79
Query: 2596 NSRLSCQ 2602
+SRLSCQ
Sbjct: 80 HSRLSCQ 86
Score = 34.3 bits (77), Expect = 0.97, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 1142 GISLCDALLKNSI-FIEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWGLEE 1199
G+SL +AL I + C C+CATCHV++ F + + + E D+L+ +
Sbjct: 20 GLSLMEALRDAGIDELLALCGGCCSCATCHVLVAPAFADRLPALSGDENDLLDSSDHRTP 79
Query: 1200 NSRLS 1204
+SRLS
Sbjct: 80 HSRLS 84
>pdb|1B9R|A Chain A, Terpredoxin From Pseudomonas Sp
Length = 105
Score = 39.3 bits (90), Expect = 0.028, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 2524 LDEIKNGAIFNENSGISLCDALLKNSI-FIEHACEKSCACATCHVIIREGFNEI-NKANE 2581
+DE + G SL + +N + I C SC CATC + I + + EI +AN
Sbjct: 6 IDEQSGEYAVDAQDGQSLMEVATQNGVPGIVAECGGSCVCATCRIEIEDAWVEIVGEANP 65
Query: 2582 VEEDML-NKAWGLEENSRLSCQ 2602
E D+L + + +RLSCQ
Sbjct: 66 DENDLLQSTGEPMTAGTRLSCQ 87
Score = 34.3 bits (77), Expect = 1.1, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1128 LDEIKNGAIFNENSGISLCDALLKNSI-FIEHACEKSCACATCHVIIREGFNEI-NKANE 1185
+DE + G SL + +N + I C SC CATC + I + + EI +AN
Sbjct: 6 IDEQSGEYAVDAQDGQSLMEVATQNGVPGIVAECGGSCVCATCRIEIEDAWVEIVGEANP 65
Query: 1186 VEEDML 1191
E D+L
Sbjct: 66 DENDLL 71
>pdb|1E9M|A Chain A, Ferredoxin Vi From Rhodobacter Capsulatus
pdb|1UWM|A Chain A, Reduced Ferredoxin 6 From Rhodobacter Capsulatus
Length = 106
Score = 38.9 bits (89), Expect = 0.036, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 2538 GISLCDALLKNSI-FIEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAWGLEE 2595
G+++ +A N + I+ C +CAC+TCH + + +++ KA E DM++ A+ E
Sbjct: 20 GLTVMEAARDNGVPGIDADCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAY--EP 77
Query: 2596 N---SRLSCQ 2602
N SRL+CQ
Sbjct: 78 NPATSRLTCQ 87
Score = 33.5 bits (75), Expect = 1.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 1142 GISLCDALLKNSI-FIEHACEKSCACATCHVIIREGF-NEINKANEVEEDMLNKAW 1195
G+++ +A N + I+ C +CAC+TCH + + +++ KA E DM++ A+
Sbjct: 20 GLTVMEAARDNGVPGIDADCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAY 75
>pdb|3ISL|A Chain A, Crystal Structure Of Ureidoglycine-Glyoxylate
Aminotransferase (Pucg) From Bacillus Subtilis
pdb|3ISL|B Chain B, Crystal Structure Of Ureidoglycine-Glyoxylate
Aminotransferase (Pucg) From Bacillus Subtilis
Length = 416
Score = 38.5 bits (88), Expect = 0.056, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 142 VMLVNNEI--GVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 190
V +V+ E G I P+ IGE CR++ +F DA +G ++ + +K+D
Sbjct: 140 VAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKID 190
Score = 38.5 bits (88), Expect = 0.056, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 1538 VMLVNNEI--GVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 1586
V +V+ E G I P+ IGE CR++ +F DA +G ++ + +K+D
Sbjct: 140 VAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKID 190
>pdb|2DR1|A Chain A, Crystal Structure Of The Ph1308 Protein From Pyrococcus
Horikoshii Ot3
pdb|2DR1|B Chain B, Crystal Structure Of The Ph1308 Protein From Pyrococcus
Horikoshii Ot3
Length = 386
Score = 37.0 bits (84), Expect = 0.14, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 106 LENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEI--GVIQPILEIGELCR 163
+E++G + L+ + + L++ + + + +V + NE GV+ P+ E+ ++ +
Sbjct: 114 VESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAK 173
Query: 164 SKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKG--IGALYIR 211
+ DA A+G DI + +D++ S+ K +G P G IGA R
Sbjct: 174 EHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSER 224
Score = 37.0 bits (84), Expect = 0.14, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1502 LENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEI--GVIQPILEIGELCR 1559
+E++G + L+ + + L++ + + + +V + NE GV+ P+ E+ ++ +
Sbjct: 114 VESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAK 173
Query: 1560 SKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKG--IGALYIR 1607
+ DA A+G DI + +D++ S+ K +G P G IGA R
Sbjct: 174 EHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSER 224
>pdb|3H1Q|A Chain A, Crystal Structure Of Ethanolamine Utilization Protein Eutj
From Carboxydothermus Hydrogenoformans
pdb|3H1Q|B Chain B, Crystal Structure Of Ethanolamine Utilization Protein Eutj
From Carboxydothermus Hydrogenoformans
Length = 272
Score = 37.0 bits (84), Expect = 0.15, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 748 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 807
QI LK E + + +F A +P + + AGL ++ L++EP +AA
Sbjct: 75 QIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAAR 134
Query: 808 AYKLDKNIFEGIFAVYDLGGGTFDISILK 836
A ++ I V D+GGGT I++++
Sbjct: 135 ALGINDGI------VVDIGGGTTGIAVIE 157
Score = 37.0 bits (84), Expect = 0.15, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 2144 QIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAI 2203
QI LK E + + +F A +P + + AGL ++ L++EP +AA
Sbjct: 75 QIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAAR 134
Query: 2204 AYKLDKNIFEGIFAVYDLGGGTFDISILK 2232
A ++ I V D+GGGT I++++
Sbjct: 135 ALGINDGI------VVDIGGGTTGIAVIE 157
>pdb|2HUF|A Chain A, Crystal Structure Of Aedes Aegypti Alanine Glyoxylate
Aminotransferase
pdb|2HUF|B Chain B, Crystal Structure Of Aedes Aegypti Alanine Glyoxylate
Aminotransferase
pdb|2HUI|A Chain A, Crystal Structure Of Aedes Aegypti Alanine Glyoxylate
Aminotransferase In Complex With Glyoxylic Acid
pdb|2HUI|B Chain B, Crystal Structure Of Aedes Aegypti Alanine Glyoxylate
Aminotransferase In Complex With Glyoxylic Acid
pdb|2HUU|A Chain A, Crystal Structure Of Aedes Aegypti Alanine Glyoxylate
Aminotransferase In Complex With Alanine
pdb|2HUU|B Chain B, Crystal Structure Of Aedes Aegypti Alanine Glyoxylate
Aminotransferase In Complex With Alanine
Length = 393
Score = 35.4 bits (80), Expect = 0.42, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 146 NNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKG 204
++ GV+Q + +G LC + D ++G + + +++D M + + G P G
Sbjct: 154 DSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQXVLGAPPG 213
Query: 205 IGAL---------YIRRNPRTRIEA-QIHGGGHEYG------LRSGTLATHQIVGMGEAF 248
I + Y RRN + ++ + G +G + T+++ + G+ EA
Sbjct: 214 ITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAI 273
Query: 249 RLARIE-MKEELKRILFLQKRLYNGLMESIEEIY 281
+A E + + R KRLY GL ++ E+Y
Sbjct: 274 AMACEEGLPALIARHEDCAKRLYRGLQDAGFELY 307
Score = 35.4 bits (80), Expect = 0.42, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 1542 NNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKG 1600
++ GV+Q + +G LC + D ++G + + +++D M + + G P G
Sbjct: 154 DSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQXVLGAPPG 213
Query: 1601 IGAL---------YIRRNPRTRIEA-QIHGGGHEYG------LRSGTLATHQIVGMGEAF 1644
I + Y RRN + ++ + G +G + T+++ + G+ EA
Sbjct: 214 ITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAI 273
Query: 1645 RLARIE-MKEELKRILFLQKRLYNGLMESIEEIY 1677
+A E + + R KRLY GL ++ E+Y
Sbjct: 274 AMACEEGLPALIARHEDCAKRLYRGLQDAGFELY 307
>pdb|3NNK|A Chain A, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|B Chain B, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|C Chain C, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|D Chain D, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|E Chain E, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|F Chain F, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|G Chain G, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|H Chain H, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|J Chain J, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|K Chain K, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|L Chain L, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|M Chain M, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|O Chain O, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|P Chain P, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|R Chain R, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
pdb|3NNK|S Chain S, Biochemical And Structural Characterization Of A
Ureidoglycine Aminotransferase In The Klebsiella
Pneumoniae Uric Acid Catabolic Pathway
Length = 411
Score = 35.0 bits (79), Expect = 0.57, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 151 VIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALY 209
++QP+ E+GE+CR +F+ DA ++G + + +D +S + GP G +
Sbjct: 153 MLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQXCLGGPSGTSPIT 212
Query: 210 --------IRRNPRTRIEAQIHGGGHEYG 230
IRR R +E I H G
Sbjct: 213 LSARMEEAIRR--RKCVEEGIRTDAHRDG 239
Score = 35.0 bits (79), Expect = 0.57, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 1547 VIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALY 1605
++QP+ E+GE+CR +F+ DA ++G + + +D +S + GP G +
Sbjct: 153 MLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQXCLGGPSGTSPIT 212
Query: 1606 --------IRRNPRTRIEAQIHGGGHEYG 1626
IRR R +E I H G
Sbjct: 213 LSARMEEAIRR--RKCVEEGIRTDAHRDG 239
>pdb|1VJO|A Chain A, Crystal Structure Of Alanine--Glyoxylate Aminotransferase
(Alr1004) From Nostoc Sp. At 1.70 A Resolution
Length = 393
Score = 34.7 bits (78), Expect = 0.73, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 139 LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 198
+++++ G QP+ +GELCR G + D ++G + I + + VDL + K
Sbjct: 162 ILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQK 221
Query: 199 IYG 201
G
Sbjct: 222 GLG 224
Score = 34.7 bits (78), Expect = 0.73, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 1535 LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 1594
+++++ G QP+ +GELCR G + D ++G + I + + VDL + K
Sbjct: 162 ILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQK 221
Query: 1595 IYG 1597
G
Sbjct: 222 GLG 224
>pdb|1H0C|A Chain A, The Crystal Structure Of Human Alanine:glyoxylate
Aminotransferase
Length = 392
Score = 34.3 bits (77), Expect = 0.98, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 107 ENDGFRVTYLKPKNNGLITLSQLEEKICSDT-ILVSVMLVNNEIGVIQPILEIGELCRSK 165
E G RV + G TL ++EE + +L+ + + GV+QP+ GELC
Sbjct: 117 ERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRY 176
Query: 166 GVIFHCDAAQAVGKIDINIQNYKVDLM-SFSAHKIYGPKG 204
+ D+ ++G + + +D++ S S + P G
Sbjct: 177 KCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPG 216
Score = 34.3 bits (77), Expect = 0.98, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 1503 ENDGFRVTYLKPKNNGLITLSQLEEKICSDT-ILVSVMLVNNEIGVIQPILEIGELCRSK 1561
E G RV + G TL ++EE + +L+ + + GV+QP+ GELC
Sbjct: 117 ERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRY 176
Query: 1562 GVIFHCDAAQAVGKIDINIQNYKVDLM-SFSAHKIYGPKG 1600
+ D+ ++G + + +D++ S S + P G
Sbjct: 177 KCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPG 216
>pdb|3R9A|A Chain A, Human Alanine-Glyoxylate Aminotransferase In Complex With
The Tpr Domain Of Human Pex5p
pdb|3R9A|C Chain C, Human Alanine-Glyoxylate Aminotransferase In Complex With
The Tpr Domain Of Human Pex5p
Length = 394
Score = 33.9 bits (76), Expect = 1.2, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 107 ENDGFRVTYLKPKNNGLITLSQLEEKICSDT-ILVSVMLVNNEIGVIQPILEIGELCRSK 165
E G RV + G TL ++EE + +L+ + + GV+QP+ GELC
Sbjct: 119 ERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRY 178
Query: 166 GVIFHCDAAQAVGKIDINIQNYKVDLM-SFSAHKIYGPKG 204
+ D+ ++G + + +D++ S S + P G
Sbjct: 179 KCLLLVDSVASLGGTPLYMDRQGIDILYSGSQXALNAPPG 218
Score = 33.9 bits (76), Expect = 1.2, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 1503 ENDGFRVTYLKPKNNGLITLSQLEEKICSDT-ILVSVMLVNNEIGVIQPILEIGELCRSK 1561
E G RV + G TL ++EE + +L+ + + GV+QP+ GELC
Sbjct: 119 ERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRY 178
Query: 1562 GVIFHCDAAQAVGKIDINIQNYKVDLM-SFSAHKIYGPKG 1600
+ D+ ++G + + +D++ S S + P G
Sbjct: 179 KCLLLVDSVASLGGTPLYMDRQGIDILYSGSQXALNAPPG 218
>pdb|3UO2|A Chain A, Jac1 Co-Chaperone From Saccharomyces Cerevisiae
pdb|3UO2|B Chain B, Jac1 Co-Chaperone From Saccharomyces Cerevisiae
Length = 175
Score = 33.1 bits (74), Expect = 2.2, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 556 STYLNKAYSILKDPFLRSIYLCK-LNGIDLNTKLNLN 591
S+ LN+AY LKDP RS Y+ K L IDL + N
Sbjct: 50 SSTLNQAYHTLKDPLRRSQYMLKLLRNIDLTQEQTSN 86
Score = 33.1 bits (74), Expect = 2.2, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 1952 STYLNKAYSILKDPFLRSIYLCK-LNGIDLNTKLNLN 1987
S+ LN+AY LKDP RS Y+ K L IDL + N
Sbjct: 50 SSTLNQAYHTLKDPLRRSQYMLKLLRNIDLTQEQTSN 86
>pdb|3UO3|A Chain A, Jac1 Co-Chaperone From Saccharomyces Cerevisiae, 5-182
Clone
pdb|3UO3|B Chain B, Jac1 Co-Chaperone From Saccharomyces Cerevisiae, 5-182
Clone
Length = 181
Score = 33.1 bits (74), Expect = 2.3, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 556 STYLNKAYSILKDPFLRSIYLCK-LNGIDLNTKLNLN 591
S+ LN+AY LKDP RS Y+ K L IDL + N
Sbjct: 58 SSTLNQAYHTLKDPLRRSQYMLKLLRNIDLTQEQTSN 94
Score = 33.1 bits (74), Expect = 2.3, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 1952 STYLNKAYSILKDPFLRSIYLCK-LNGIDLNTKLNLN 1987
S+ LN+AY LKDP RS Y+ K L IDL + N
Sbjct: 58 SSTLNQAYHTLKDPLRRSQYMLKLLRNIDLTQEQTSN 94
>pdb|1M32|A Chain A, Crystal Structure Of 2-Aminoethylphosphonate Transaminase
pdb|1M32|B Chain B, Crystal Structure Of 2-Aminoethylphosphonate Transaminase
pdb|1M32|C Chain C, Crystal Structure Of 2-Aminoethylphosphonate Transaminase
pdb|1M32|D Chain D, Crystal Structure Of 2-Aminoethylphosphonate Transaminase
pdb|1M32|E Chain E, Crystal Structure Of 2-Aminoethylphosphonate Transaminase
pdb|1M32|F Chain F, Crystal Structure Of 2-Aminoethylphosphonate Transaminase
Length = 366
Score = 32.0 bits (71), Expect = 4.7, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 14/129 (10%)
Query: 135 SDTILVSVMLVNNEI--GVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLM 192
+D + + V++E G + PI E+G L G + DA + G I +I +D +
Sbjct: 128 ADPTISHIAXVHSETTTGXLNPIDEVGALAHRYGKTYIVDAXSSFGGIPXDIAALHIDYL 187
Query: 193 SFSAHK-IYGPKGIGALYIR-----------RNPRTRIEAQIHGGGHEYGLRSGTLATHQ 240
SA+K I G G + R R+ + AQ +G T TH
Sbjct: 188 ISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCXEDNHGKWRFTSPTHT 247
Query: 241 IVGMGEAFR 249
++ +A +
Sbjct: 248 VLAFAQALK 256
Score = 32.0 bits (71), Expect = 4.7, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 14/129 (10%)
Query: 1531 SDTILVSVMLVNNEI--GVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLM 1588
+D + + V++E G + PI E+G L G + DA + G I +I +D +
Sbjct: 128 ADPTISHIAXVHSETTTGXLNPIDEVGALAHRYGKTYIVDAXSSFGGIPXDIAALHIDYL 187
Query: 1589 SFSAHK-IYGPKGIGALYIR-----------RNPRTRIEAQIHGGGHEYGLRSGTLATHQ 1636
SA+K I G G + R R+ + AQ +G T TH
Sbjct: 188 ISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCXEDNHGKWRFTSPTHT 247
Query: 1637 IVGMGEAFR 1645
++ +A +
Sbjct: 248 VLAFAQALK 256
>pdb|3MBB|A Chain A, Crystal Structure Of Stspl - Apo Form, After Treatment
With Semicarbazide
pdb|3MBB|B Chain B, Crystal Structure Of Stspl - Apo Form, After Treatment
With Semicarbazide
Length = 514
Score = 31.2 bits (69), Expect = 8.5, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 126 LSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDA---------AQA 176
++ + E I +T++V+ GV+ PI EI L G+ H DA A+
Sbjct: 229 VAAMREAITPNTVVVAGSAPGXPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAER 288
Query: 177 VG----KIDINIQNYKVDLMSFSAHKI-YGPKGIGALYIRR 212
+G D ++ V +S HK YG KG + RR
Sbjct: 289 LGYPVPPFDFRLEG--VTSVSADTHKYGYGAKGTSVILYRR 327
Score = 31.2 bits (69), Expect = 8.5, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 1522 LSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDA---------AQA 1572
++ + E I +T++V+ GV+ PI EI L G+ H DA A+
Sbjct: 229 VAAMREAITPNTVVVAGSAPGXPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAER 288
Query: 1573 VG----KIDINIQNYKVDLMSFSAHKI-YGPKGIGALYIRR 1608
+G D ++ V +S HK YG KG + RR
Sbjct: 289 LGYPVPPFDFRLEG--VTSVSADTHKYGYGAKGTSVILYRR 327
>pdb|3CIN|A Chain A, Crystal Structure Of A Myo-Inositol-1-Phosphate
Synthase-Related Protein (Tm_1419) From Thermotoga
Maritima Msb8 At 1.70 A Resolution
Length = 394
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 19/122 (15%)
Query: 542 IQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGIDLNTKLNLNFSHDFLEQQM 601
+ ++KI + S + Y N S+ DP +R G+ L + NL + LE M
Sbjct: 66 VDRAKIGKKLSEVVKQYWNDVDSLTSDPEIRK-------GVHLGSVRNLPIEAEGLEDSM 118
Query: 602 KWRETLSIIKNKKDKVKFMALLQISEPDDISVKNKCVSIG-IDFGTTNSLVAIVRNNIPE 660
+E + + + + +E D + N C + + FG L+ + NN E
Sbjct: 119 TLKEAVDTL-----------VKEWTELDPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKE 167
Query: 661 VL 662
L
Sbjct: 168 RL 169
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 19/122 (15%)
Query: 1938 IQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGIDLNTKLNLNFSHDFLEQQM 1997
+ ++KI + S + Y N S+ DP +R G+ L + NL + LE M
Sbjct: 66 VDRAKIGKKLSEVVKQYWNDVDSLTSDPEIRK-------GVHLGSVRNLPIEAEGLEDSM 118
Query: 1998 KWRETLSIIKNKKDKVKFMALLQISEPDDISVKNKCVSIG-IDFGTTNSLVAIVRNNIPE 2056
+E + + + + +E D + N C + + FG L+ + NN E
Sbjct: 119 TLKEAVDTL-----------VKEWTELDPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKE 167
Query: 2057 VL 2058
L
Sbjct: 168 RL 169
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,090,717
Number of Sequences: 62578
Number of extensions: 3217530
Number of successful extensions: 9000
Number of sequences better than 100.0: 165
Number of HSP's better than 100.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 8015
Number of HSP's gapped (non-prelim): 414
length of query: 2602
length of database: 14,973,337
effective HSP length: 115
effective length of query: 2487
effective length of database: 7,776,867
effective search space: 19341068229
effective search space used: 19341068229
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)