Query psy15216
Match_columns 2602
No_of_seqs 2011 out of 11975
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 23:48:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15216.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15216hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 1.3E-80 4.6E-85 840.7 56.1 500 638-1142 3-521 (605)
2 2kho_A Heat shock protein 70; 100.0 4.2E-78 1.4E-82 816.3 49.9 501 638-1143 3-522 (605)
3 1yuw_A Heat shock cognate 71 k 100.0 9.7E-77 3.3E-81 796.0 58.0 521 638-1161 5-543 (554)
4 4b9q_A Chaperone protein DNAK; 100.0 2.2E-76 7.6E-81 799.4 58.9 494 2033-2530 2-515 (605)
5 3d2f_A Heat shock protein homo 100.0 1.5E-75 5.1E-80 794.0 52.2 499 639-1144 4-540 (675)
6 2kho_A Heat shock protein 70; 100.0 3.4E-74 1.2E-78 778.1 50.2 493 2034-2530 3-515 (605)
7 2v7y_A Chaperone protein DNAK; 100.0 5.9E-73 2E-77 754.9 57.9 479 638-1143 3-491 (509)
8 1yuw_A Heat shock cognate 71 k 100.0 6.1E-73 2.1E-77 759.2 57.5 494 2034-2530 5-518 (554)
9 3d2f_A Heat shock protein homo 100.0 1.3E-71 4.3E-76 755.6 54.2 491 2034-2530 3-532 (675)
10 2v7y_A Chaperone protein DNAK; 100.0 1E-69 3.5E-74 723.7 58.3 471 2034-2530 3-484 (509)
11 1kon_A Protein YEBC, YEBC; alp 100.0 2.6E-63 9E-68 562.4 19.8 228 1190-1420 4-233 (249)
12 1lfp_A Hypothetical protein AQ 100.0 4.3E-63 1.5E-67 560.6 18.9 228 1190-1420 1-232 (249)
13 4f3q_A Transcriptional regulat 100.0 1.9E-63 6.7E-68 564.2 15.9 229 1189-1419 3-233 (247)
14 1mw7_A Hypothetical protein HP 100.0 2.9E-62 9.8E-67 552.3 15.0 223 1192-1419 2-232 (240)
15 3i33_A Heat shock-related 70 k 100.0 3.7E-53 1.3E-57 553.8 44.2 367 633-1000 19-403 (404)
16 4gni_A Putative heat shock pro 100.0 6E-53 2.1E-57 551.9 44.8 366 635-1001 11-404 (409)
17 3qfu_A 78 kDa glucose-regulate 100.0 1.2E-51 4.2E-56 538.7 43.4 363 636-999 17-394 (394)
18 4gni_A Putative heat shock pro 100.0 4.7E-51 1.6E-55 533.9 43.9 365 2031-2397 11-404 (409)
19 1dkg_D Molecular chaperone DNA 100.0 3.3E-51 1.1E-55 531.3 38.5 362 638-999 3-383 (383)
20 3i33_A Heat shock-related 70 k 100.0 1.2E-50 4.1E-55 530.1 43.5 366 2030-2396 20-403 (404)
21 3qfu_A 78 kDa glucose-regulate 100.0 2E-49 6.7E-54 517.8 42.4 364 2031-2395 16-394 (394)
22 1dkg_D Molecular chaperone DNA 100.0 4.2E-49 1.4E-53 511.6 39.8 362 2034-2395 3-383 (383)
23 1jce_A ROD shape-determining p 100.0 1.2E-35 4.1E-40 379.1 29.4 310 638-999 4-327 (344)
24 4hvk_A Probable cysteine desul 100.0 2E-34 6.9E-39 375.5 37.0 364 1-369 4-369 (382)
25 1jce_A ROD shape-determining p 100.0 1.7E-34 5.9E-39 368.3 28.2 310 2034-2395 4-327 (344)
26 4eb5_A Probable cysteine desul 100.0 3.2E-33 1.1E-37 364.2 37.7 364 1-369 4-369 (382)
27 3lvm_A Cysteine desulfurase; s 100.0 4.7E-33 1.6E-37 367.8 38.9 368 1-369 26-395 (423)
28 4hvk_A Probable cysteine desul 100.0 5.6E-33 1.9E-37 361.8 38.2 365 1396-1765 2-369 (382)
29 1eg5_A Aminotransferase; PLP-d 100.0 2.6E-32 9E-37 355.8 39.7 364 1-369 5-372 (384)
30 3lvm_A Cysteine desulfurase; s 100.0 9E-32 3.1E-36 355.5 40.8 372 1393-1765 21-395 (423)
31 4eb5_A Probable cysteine desul 100.0 7.7E-32 2.6E-36 351.1 38.9 365 1396-1765 2-369 (382)
32 3vax_A Putative uncharacterize 100.0 8.5E-33 2.9E-37 362.5 29.7 365 1-369 24-396 (400)
33 1eg5_A Aminotransferase; PLP-d 100.0 6.7E-31 2.3E-35 342.5 40.5 365 1396-1765 3-372 (384)
34 3vax_A Putative uncharacterize 100.0 6.4E-32 2.2E-36 354.2 29.7 375 1386-1764 12-395 (400)
35 1kmj_A Selenocysteine lyase; p 100.0 6.3E-31 2.2E-35 345.5 37.8 355 1-369 27-401 (406)
36 3cai_A Possible aminotransfera 100.0 1E-30 3.5E-35 343.4 36.3 353 1-368 30-404 (406)
37 3e77_A Phosphoserine aminotran 100.0 4.6E-31 1.6E-35 334.2 28.7 337 1-369 16-371 (377)
38 1t3i_A Probable cysteine desul 100.0 7.1E-30 2.4E-34 337.2 38.2 357 1-369 32-409 (420)
39 1kmj_A Selenocysteine lyase; p 100.0 1.1E-29 3.8E-34 333.7 36.9 358 1394-1765 23-401 (406)
40 3a9z_A Selenocysteine lyase; P 100.0 7.5E-30 2.6E-34 338.0 35.6 366 1-369 22-424 (432)
41 3cai_A Possible aminotransfera 100.0 2E-29 6.9E-34 331.1 36.1 355 1395-1764 27-404 (406)
42 3qm2_A Phosphoserine aminotran 100.0 5.4E-31 1.9E-35 336.1 20.0 332 1-369 30-381 (386)
43 3e77_A Phosphoserine aminotran 100.0 1.3E-29 4.6E-34 320.8 29.6 332 1401-1764 20-370 (377)
44 1t3i_A Probable cysteine desul 100.0 7.9E-29 2.7E-33 327.1 37.3 359 1395-1765 29-409 (420)
45 3a9z_A Selenocysteine lyase; P 100.0 2.4E-28 8.1E-33 323.6 37.9 370 1393-1765 17-424 (432)
46 1elu_A L-cysteine/L-cystine C- 100.0 4.9E-28 1.7E-32 316.2 38.6 340 1-369 20-388 (390)
47 3qm2_A Phosphoserine aminotran 100.0 6.6E-30 2.3E-34 326.1 20.3 333 1395-1764 27-380 (386)
48 1iug_A Putative aspartate amin 100.0 2.2E-28 7.4E-33 314.7 29.8 326 1-369 4-344 (352)
49 3m5u_A Phosphoserine aminotran 100.0 6.1E-29 2.1E-33 314.2 22.6 327 3-369 10-356 (361)
50 2z9v_A Aspartate aminotransfer 100.0 1.5E-28 5.2E-33 321.2 27.0 333 1-369 12-367 (392)
51 3e9k_A Kynureninase; kynurenin 100.0 1.9E-28 6.3E-33 327.2 26.5 343 1-369 71-457 (465)
52 1elu_A L-cysteine/L-cystine C- 100.0 5.8E-27 2E-31 306.0 38.4 342 1394-1764 16-387 (390)
53 3m5u_A Phosphoserine aminotran 100.0 1.9E-28 6.7E-33 309.7 23.5 330 1396-1764 7-355 (361)
54 2huf_A Alanine glyoxylate amin 100.0 5.4E-28 1.8E-32 316.1 27.0 332 2-369 23-379 (393)
55 3ffr_A Phosphoserine aminotran 100.0 2.6E-27 9E-32 305.8 31.2 331 3-369 9-360 (362)
56 1iug_A Putative aspartate amin 100.0 1.4E-27 4.8E-32 307.1 28.2 324 1399-1765 6-344 (352)
57 2dr1_A PH1308 protein, 386AA l 100.0 2.2E-27 7.5E-32 309.5 30.4 333 1-369 23-375 (386)
58 2z9v_A Aspartate aminotransfer 100.0 1.4E-27 4.8E-32 312.0 27.2 335 1395-1765 9-367 (392)
59 3zrp_A Serine-pyruvate aminotr 100.0 1.2E-27 4.3E-32 311.6 25.9 329 3-369 7-359 (384)
60 3e9k_A Kynureninase; kynurenin 100.0 2E-27 7E-32 317.2 28.5 346 1394-1765 67-457 (465)
61 2huf_A Alanine glyoxylate amin 100.0 3.4E-27 1.2E-31 308.4 28.4 330 1400-1765 25-379 (393)
62 2yrr_A Aminotransferase, class 100.0 1.9E-27 6.4E-32 306.0 24.8 328 2-369 4-349 (353)
63 3isl_A Purine catabolism prote 100.0 2.1E-27 7E-32 313.1 25.0 307 37-369 40-386 (416)
64 3ffr_A Phosphoserine aminotran 100.0 1.5E-26 5E-31 298.8 32.1 331 1398-1764 8-359 (362)
65 3isl_A Purine catabolism prote 100.0 3.4E-27 1.2E-31 311.0 26.4 307 1433-1765 40-386 (416)
66 3nnk_A Ureidoglycine-glyoxylat 99.9 4.5E-27 1.6E-31 309.3 27.2 330 4-369 19-386 (411)
67 1vjo_A Alanine--glyoxylate ami 99.9 4.7E-27 1.6E-31 307.1 26.1 331 1-369 37-391 (393)
68 3zrp_A Serine-pyruvate aminotr 99.9 4.1E-27 1.4E-31 306.7 25.5 329 1399-1765 7-359 (384)
69 2dr1_A PH1308 protein, 386AA l 99.9 1.9E-26 6.4E-31 300.7 30.9 334 1396-1765 21-375 (386)
70 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 2.8E-27 9.6E-32 306.7 22.9 335 1-369 12-366 (371)
71 3nnk_A Ureidoglycine-glyoxylat 99.9 9.3E-27 3.2E-31 306.3 28.2 332 1398-1765 17-386 (411)
72 2ch1_A 3-hydroxykynurenine tra 99.9 7.3E-27 2.5E-31 305.7 26.9 331 3-369 23-379 (396)
73 1qz9_A Kynureninase; kynurenin 99.9 3.2E-26 1.1E-30 301.7 31.2 334 1-369 32-398 (416)
74 2c0r_A PSAT, phosphoserine ami 99.9 1.6E-26 5.5E-31 298.3 27.6 330 1-369 7-357 (362)
75 2yrr_A Aminotransferase, class 99.9 9.4E-27 3.2E-31 299.4 25.0 329 1398-1765 4-349 (353)
76 3kgw_A Alanine-glyoxylate amin 99.9 2.5E-26 8.6E-31 300.2 26.3 332 2-369 27-384 (393)
77 2ch1_A 3-hydroxykynurenine tra 99.9 2.4E-26 8.3E-31 300.7 26.1 330 1400-1765 24-379 (396)
78 3f0h_A Aminotransferase; RER07 99.9 7.2E-26 2.5E-30 294.0 29.8 328 4-369 25-370 (376)
79 1w23_A Phosphoserine aminotran 99.9 2.2E-26 7.5E-31 296.9 23.6 331 2-369 7-356 (360)
80 1vjo_A Alanine--glyoxylate ami 99.9 4.2E-26 1.4E-30 298.1 26.4 332 1395-1764 34-390 (393)
81 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 2.2E-26 7.5E-31 298.3 22.7 340 1395-1765 9-366 (371)
82 1m32_A 2-aminoethylphosphonate 99.9 7.6E-26 2.6E-30 292.5 27.3 324 7-369 13-361 (366)
83 3kgw_A Alanine-glyoxylate amin 99.9 7.8E-26 2.7E-30 295.6 27.2 331 1399-1765 28-384 (393)
84 2c0r_A PSAT, phosphoserine ami 99.9 1.5E-25 5.2E-30 289.1 28.3 330 1396-1764 5-356 (362)
85 3ffh_A Histidinol-phosphate am 99.9 2.6E-25 8.9E-30 287.1 30.4 305 8-368 45-361 (363)
86 3f0h_A Aminotransferase; RER07 99.9 1.9E-25 6.6E-30 289.9 29.2 330 1398-1765 23-370 (376)
87 1qz9_A Kynureninase; kynurenin 99.9 4.4E-25 1.5E-29 290.8 32.2 338 1393-1765 27-398 (416)
88 1m32_A 2-aminoethylphosphonate 99.9 2.3E-25 8E-30 288.0 27.9 327 1399-1765 9-361 (366)
89 3get_A Histidinol-phosphate am 99.9 3.5E-25 1.2E-29 286.2 28.9 304 8-369 43-363 (365)
90 3f9t_A TDC, L-tyrosine decarbo 99.9 1E-24 3.6E-29 285.2 33.3 324 6-369 39-394 (397)
91 1w23_A Phosphoserine aminotran 99.9 1.7E-25 5.7E-30 288.7 23.9 330 1398-1764 7-355 (360)
92 3f9t_A TDC, L-tyrosine decarbo 99.9 1.7E-24 5.8E-29 283.3 32.8 330 1396-1765 33-394 (397)
93 3euc_A Histidinol-phosphate am 99.9 8.3E-25 2.8E-29 282.9 29.3 306 8-369 43-364 (367)
94 2bkw_A Alanine-glyoxylate amin 99.9 5E-25 1.7E-29 287.0 27.0 337 1394-1765 5-380 (385)
95 3ly1_A Putative histidinol-pho 99.9 6.8E-25 2.3E-29 282.2 27.4 304 8-369 29-348 (354)
96 3p1t_A Putative histidinol-pho 99.9 1.9E-24 6.3E-29 276.1 29.7 306 1-369 21-333 (337)
97 4dq6_A Putative pyridoxal phos 99.9 1.7E-24 5.9E-29 282.6 29.6 319 8-369 45-389 (391)
98 2bkw_A Alanine-glyoxylate amin 99.9 7.5E-25 2.6E-29 285.4 25.7 331 4-369 11-380 (385)
99 3ffh_A Histidinol-phosphate am 99.9 2.6E-24 9E-29 277.7 30.5 307 1402-1764 43-361 (363)
100 3dzz_A Putative pyridoxal 5'-p 99.9 1.9E-24 6.7E-29 282.1 27.8 319 8-369 40-385 (391)
101 2dgk_A GAD-beta, GADB, glutama 99.9 1.2E-23 4.2E-28 279.2 35.4 337 7-369 52-430 (452)
102 1v2d_A Glutamine aminotransfer 99.9 2.1E-24 7.3E-29 280.5 27.5 313 8-369 38-367 (381)
103 1b5p_A Protein (aspartate amin 99.9 3.7E-24 1.3E-28 278.5 29.2 312 8-369 44-381 (385)
104 3get_A Histidinol-phosphate am 99.9 3.5E-24 1.2E-28 276.7 28.0 312 1395-1764 32-362 (365)
105 2fnu_A Aminotransferase; prote 99.9 5.6E-24 1.9E-28 276.1 29.9 338 6-369 8-368 (375)
106 3hbx_A GAD 1, glutamate decarb 99.9 2.3E-23 7.8E-28 278.7 36.3 337 6-369 65-440 (502)
107 2dgk_A GAD-beta, GADB, glutama 99.9 1.9E-23 6.5E-28 277.4 34.9 336 1404-1765 53-430 (452)
108 3kax_A Aminotransferase, class 99.9 3E-24 1E-28 279.5 26.2 319 8-369 37-381 (383)
109 3euc_A Histidinol-phosphate am 99.9 7.2E-24 2.5E-28 274.1 29.4 318 1392-1765 29-364 (367)
110 3hdo_A Histidinol-phosphate am 99.9 7.1E-24 2.4E-28 273.3 28.5 302 8-369 39-351 (360)
111 3ly1_A Putative histidinol-pho 99.9 6.4E-24 2.2E-28 273.1 27.6 314 1394-1765 17-348 (354)
112 1rv3_A Serine hydroxymethyltra 99.9 7.5E-25 2.6E-29 291.8 19.4 332 1402-1765 53-427 (483)
113 3ke3_A Putative serine-pyruvat 99.9 1.3E-24 4.6E-29 281.6 21.2 318 25-369 21-372 (379)
114 1fg7_A Histidinol phosphate am 99.9 7.4E-24 2.5E-28 272.2 27.5 280 43-368 60-353 (356)
115 1gd9_A Aspartate aminotransfer 99.9 7.6E-24 2.6E-28 276.2 27.9 314 8-369 39-382 (389)
116 1b5p_A Protein (aspartate amin 99.9 8.9E-24 3E-28 274.8 27.7 312 1403-1764 43-380 (385)
117 3p1t_A Putative histidinol-pho 99.9 1.6E-23 5.4E-28 267.5 29.4 310 1392-1764 15-332 (337)
118 3ke3_A Putative serine-pyruvat 99.9 2.2E-24 7.4E-29 279.6 21.7 318 1421-1765 21-372 (379)
119 3hbx_A GAD 1, glutamate decarb 99.9 5.7E-23 1.9E-27 274.8 35.4 336 1403-1765 66-440 (502)
120 1rv3_A Serine hydroxymethyltra 99.9 1.3E-24 4.5E-29 289.5 19.4 334 4-369 51-427 (483)
121 4dq6_A Putative pyridoxal phos 99.9 1.1E-23 3.8E-28 274.9 27.6 320 1402-1765 43-389 (391)
122 3ftb_A Histidinol-phosphate am 99.9 2.3E-23 8E-28 268.7 30.1 304 8-369 39-357 (361)
123 2z61_A Probable aspartate amin 99.9 5.7E-24 1.9E-28 275.3 23.5 312 2-369 35-367 (370)
124 3dyd_A Tyrosine aminotransfera 99.9 1.3E-23 4.5E-28 276.9 27.1 313 7-369 70-420 (427)
125 3a2b_A Serine palmitoyltransfe 99.9 1.2E-23 4E-28 275.3 25.9 316 9-369 58-388 (398)
126 2z67_A O-phosphoseryl-tRNA(SEC 99.9 4.2E-24 1.4E-28 283.2 21.7 329 1-368 84-453 (456)
127 2fsj_A Hypothetical protein TA 99.9 6.4E-25 2.2E-29 277.3 12.9 297 637-995 21-342 (346)
128 1u08_A Hypothetical aminotrans 99.9 3.3E-23 1.1E-27 269.8 29.6 319 8-368 43-385 (386)
129 1j32_A Aspartate aminotransfer 99.9 1.4E-23 5E-28 273.5 26.2 317 8-369 43-383 (388)
130 1v2d_A Glutamine aminotransfer 99.9 1.4E-23 4.9E-28 272.7 25.7 313 1404-1765 38-367 (381)
131 3g0t_A Putative aminotransfera 99.9 1.9E-23 6.3E-28 277.1 27.2 325 8-369 57-433 (437)
132 3dzz_A Putative pyridoxal 5'-p 99.9 1.4E-23 4.7E-28 274.1 25.0 321 1402-1765 38-385 (391)
133 2fnu_A Aminotransferase; prote 99.9 3.7E-23 1.3E-27 268.3 28.9 336 1402-1765 8-368 (375)
134 3cq5_A Histidinol-phosphate am 99.9 5.6E-23 1.9E-27 265.8 30.2 302 8-369 43-364 (369)
135 2o0r_A RV0858C (N-succinyldiam 99.9 3E-23 1E-27 272.5 27.6 328 8-368 38-391 (411)
136 3fdb_A Beta C-S lyase, putativ 99.9 2.2E-23 7.5E-28 270.7 25.7 312 8-369 36-372 (377)
137 2w8t_A SPT, serine palmitoyltr 99.9 1.3E-22 4.3E-27 267.6 33.2 317 8-369 78-411 (427)
138 1lc5_A COBD, L-threonine-O-3-p 99.9 5.1E-23 1.8E-27 265.7 28.9 306 8-369 37-356 (364)
139 1xi9_A Putative transaminase; 99.9 9.8E-24 3.4E-28 276.6 22.4 314 8-369 54-399 (406)
140 3mc6_A Sphingosine-1-phosphate 99.9 8.7E-23 3E-27 274.8 32.0 331 8-369 75-433 (497)
141 3kax_A Aminotransferase, class 99.9 1.7E-23 6E-28 272.3 24.3 321 1402-1765 35-381 (383)
142 1o4s_A Aspartate aminotransfer 99.9 1.3E-23 4.3E-28 273.8 22.9 308 8-369 54-385 (389)
143 1bw0_A TAT, protein (tyrosine 99.9 3.7E-23 1.3E-27 272.3 27.3 318 6-369 48-409 (416)
144 1wyu_A Glycine dehydrogenase ( 99.9 8.9E-23 3E-27 269.8 30.6 298 36-368 103-435 (438)
145 3mad_A Sphingosine-1-phosphate 99.9 1.6E-22 5.4E-27 273.0 33.1 325 9-369 108-465 (514)
146 2jis_A Cysteine sulfinic acid 99.9 9.5E-23 3.2E-27 274.6 30.7 346 1-369 112-511 (515)
147 3l8a_A METC, putative aminotra 99.9 3.9E-23 1.3E-27 272.1 26.4 318 8-369 74-418 (421)
148 1bs0_A Protein (8-amino-7-oxon 99.9 4.3E-23 1.5E-27 268.6 26.3 315 8-368 53-382 (384)
149 3h1q_A Ethanolamine utilizatio 99.9 5.3E-23 1.8E-27 253.2 25.6 204 742-995 69-272 (272)
150 1j32_A Aspartate aminotransfer 99.9 2.7E-23 9.3E-28 270.9 24.3 313 1404-1765 43-383 (388)
151 1gd9_A Aspartate aminotransfer 99.9 5.3E-23 1.8E-27 268.3 27.0 314 1404-1765 39-382 (389)
152 3h14_A Aminotransferase, class 99.9 3.3E-23 1.1E-27 270.3 24.8 312 8-369 44-378 (391)
153 3mc6_A Sphingosine-1-phosphate 99.9 1.6E-22 5.4E-27 272.3 32.2 330 1405-1765 76-433 (497)
154 2dou_A Probable N-succinyldiam 99.9 4.2E-23 1.4E-27 267.8 25.6 314 8-368 38-373 (376)
155 2qma_A Diaminobutyrate-pyruvat 99.9 1.1E-22 3.8E-27 273.1 30.5 340 1-369 104-492 (497)
156 3hdo_A Histidinol-phosphate am 99.9 7.8E-23 2.7E-27 263.5 27.5 310 1395-1764 28-350 (360)
157 2fyf_A PSAT, phosphoserine ami 99.9 3.1E-23 1E-27 271.1 23.7 326 2-369 44-394 (398)
158 3nra_A Aspartate aminotransfer 99.9 1.1E-23 3.9E-28 276.5 19.7 319 8-369 53-401 (407)
159 1c7n_A Cystalysin; transferase 99.9 6.9E-23 2.4E-27 268.1 27.1 319 8-369 44-389 (399)
160 2z61_A Probable aspartate amin 99.9 3.8E-23 1.3E-27 267.6 24.2 305 1404-1764 42-366 (370)
161 3ele_A Amino transferase; RER0 99.9 8.4E-23 2.9E-27 267.2 27.3 316 8-369 48-392 (398)
162 3dqg_A Heat shock 70 kDa prote 99.9 1.1E-23 3.8E-28 227.8 15.5 126 1010-1135 2-127 (151)
163 3dob_A Heat shock 70 kDa prote 99.9 9.8E-24 3.4E-28 228.5 15.0 139 1010-1150 2-141 (152)
164 1yiz_A Kynurenine aminotransfe 99.9 1.4E-22 4.6E-27 268.0 29.1 329 2-369 43-425 (429)
165 1fg7_A Histidinol phosphate am 99.9 1.9E-22 6.6E-27 259.1 29.7 280 1439-1764 60-353 (356)
166 3ftb_A Histidinol-phosphate am 99.9 2.3E-22 7.9E-27 259.4 30.5 313 1394-1764 27-356 (361)
167 2fq6_A Cystathionine beta-lyas 99.9 5.1E-23 1.7E-27 267.3 24.4 308 33-368 74-413 (415)
168 2o1b_A Aminotransferase, class 99.9 5.5E-23 1.9E-27 269.0 24.8 314 8-369 60-399 (404)
169 2x5d_A Probable aminotransfera 99.9 2.9E-23 1E-27 272.7 22.3 314 8-369 50-394 (412)
170 1xi9_A Putative transaminase; 99.9 2.7E-23 9.2E-28 272.5 21.8 314 1404-1765 54-399 (406)
171 1d2f_A MALY protein; aminotran 99.9 1.3E-22 4.4E-27 264.6 27.8 315 8-369 41-385 (390)
172 3frk_A QDTB; aminotransferase, 99.9 1.3E-23 4.6E-28 272.1 18.3 329 10-368 16-363 (373)
173 2gb3_A Aspartate aminotransfer 99.9 5.5E-23 1.9E-27 269.7 24.4 320 2-369 49-398 (409)
174 3dyd_A Tyrosine aminotransfera 99.9 1.3E-22 4.4E-27 267.5 27.9 313 1403-1765 70-420 (427)
175 2ych_A Competence protein PILM 99.9 4.5E-24 1.5E-28 275.9 13.7 314 636-995 12-372 (377)
176 2fsj_A Hypothetical protein TA 99.9 2.5E-24 8.5E-29 271.9 11.0 299 2032-2392 20-343 (346)
177 3tqx_A 2-amino-3-ketobutyrate 99.9 7.6E-23 2.6E-27 267.8 25.2 317 9-369 58-392 (399)
178 3uwc_A Nucleotide-sugar aminot 99.9 6E-23 2.1E-27 266.2 24.0 334 7-369 15-367 (374)
179 2rfv_A Methionine gamma-lyase; 99.9 3.4E-23 1.2E-27 270.4 21.7 335 2-369 31-396 (398)
180 3mad_A Sphingosine-1-phosphate 99.9 3.6E-22 1.2E-26 269.5 32.2 323 1407-1765 110-465 (514)
181 1fc4_A 2-amino-3-ketobutyrate 99.9 1.2E-22 4E-27 266.2 26.6 315 9-369 60-393 (401)
182 3a2b_A Serine palmitoyltransfe 99.9 9.7E-23 3.3E-27 266.6 25.7 316 1405-1765 58-388 (398)
183 1svv_A Threonine aldolase; str 99.9 5.4E-23 1.9E-27 265.0 22.7 317 1-369 18-354 (359)
184 2zyj_A Alpha-aminodipate amino 99.9 2.3E-23 7.8E-28 272.4 19.3 316 9-369 48-389 (397)
185 1u08_A Hypothetical aminotrans 99.9 2.9E-22 9.9E-27 260.9 29.4 315 1404-1764 43-385 (386)
186 1wyu_A Glycine dehydrogenase ( 99.9 2.2E-22 7.5E-27 266.0 28.7 298 1432-1764 103-435 (438)
187 1o4s_A Aspartate aminotransfer 99.9 6.4E-23 2.2E-27 267.1 23.1 307 1404-1764 54-384 (389)
188 1bw0_A TAT, protein (tyrosine 99.9 2.3E-22 7.8E-27 264.7 28.5 318 1402-1765 48-409 (416)
189 3frk_A QDTB; aminotransferase, 99.9 2E-23 6.7E-28 270.5 18.1 330 1405-1764 15-363 (373)
190 3g0t_A Putative aminotransfera 99.9 1.2E-22 4E-27 269.4 25.8 325 1403-1764 56-432 (437)
191 3jtx_A Aminotransferase; NP_28 99.9 2.2E-22 7.5E-27 263.1 27.9 321 8-368 43-393 (396)
192 3h14_A Aminotransferase, class 99.9 1.2E-22 4.1E-27 265.0 25.3 312 1403-1764 43-377 (391)
193 1gc0_A Methionine gamma-lyase; 99.9 1.7E-22 5.7E-27 263.6 26.6 334 1-368 31-396 (398)
194 2w8t_A SPT, serine palmitoyltr 99.9 6.7E-22 2.3E-26 260.6 32.6 317 1404-1765 78-411 (427)
195 3h0x_A 78 kDa glucose-regulate 99.9 2E-23 6.7E-28 226.9 14.7 138 1010-1149 2-140 (152)
196 3aow_A Putative uncharacterize 99.9 1.8E-22 6.1E-27 266.9 26.8 316 9-369 92-441 (448)
197 3b46_A Aminotransferase BNA3; 99.9 1.8E-22 6.2E-27 267.6 26.6 318 8-368 70-442 (447)
198 3fvs_A Kynurenine--oxoglutarat 99.9 9.3E-23 3.2E-27 269.0 23.6 323 8-369 41-418 (422)
199 2dou_A Probable N-succinyldiam 99.9 2.4E-22 8.1E-27 260.7 26.8 312 1404-1764 38-373 (376)
200 2bwn_A 5-aminolevulinate synth 99.9 1.5E-22 5.3E-27 264.9 25.3 320 8-369 60-396 (401)
201 1pff_A Methionine gamma-lyase; 99.9 5.3E-23 1.8E-27 261.8 20.2 299 45-368 2-329 (331)
202 2okj_A Glutamate decarboxylase 99.9 7E-22 2.4E-26 265.8 32.1 313 33-369 124-498 (504)
203 1wyu_B Glycine dehydrogenase s 99.9 5.2E-22 1.8E-26 264.5 30.4 354 7-393 76-458 (474)
204 2jis_A Cysteine sulfinic acid 99.9 3.9E-22 1.3E-26 268.6 29.5 323 1423-1764 134-510 (515)
205 1vp4_A Aminotransferase, putat 99.9 6.1E-23 2.1E-27 270.7 21.0 316 9-369 59-414 (425)
206 3b8x_A WBDK, pyridoxamine 5-ph 99.9 2.6E-22 9E-27 261.5 26.6 331 6-367 10-390 (390)
207 2z67_A O-phosphoseryl-tRNA(SEC 99.9 6.3E-23 2.2E-27 271.9 21.0 331 1395-1764 81-453 (456)
208 3fdb_A Beta C-S lyase, putativ 99.9 1.5E-22 5.2E-27 262.7 24.2 313 1403-1765 35-372 (377)
209 3cq5_A Histidinol-phosphate am 99.9 7.5E-22 2.6E-26 255.2 30.4 310 1396-1765 33-364 (369)
210 1lc5_A COBD, L-threonine-O-3-p 99.9 5.2E-22 1.8E-26 256.2 28.8 305 1404-1764 37-355 (364)
211 3fkd_A L-threonine-O-3-phospha 99.9 2.5E-22 8.5E-27 257.8 25.6 299 8-369 28-338 (350)
212 3n8e_A Stress-70 protein, mito 99.9 2.3E-23 7.7E-28 231.8 13.3 147 1005-1153 17-163 (182)
213 2o0r_A RV0858C (N-succinyldiam 99.9 1.5E-22 5E-27 266.0 23.5 324 1404-1764 38-391 (411)
214 3l8a_A METC, putative aminotra 99.9 2E-22 6.7E-27 265.4 24.8 320 1402-1765 72-418 (421)
215 3h1q_A Ethanolamine utilizatio 99.9 2.4E-22 8.1E-27 247.5 23.7 203 2139-2391 70-272 (272)
216 1qgn_A Protein (cystathionine 99.9 1.7E-22 5.9E-27 263.4 23.2 306 32-369 105-441 (445)
217 3e2y_A Kynurenine-oxoglutarate 99.9 3.1E-22 1.1E-26 262.9 25.5 318 8-368 36-408 (410)
218 1bs0_A Protein (8-amino-7-oxon 99.9 4.3E-22 1.5E-26 259.2 26.5 316 1404-1764 53-382 (384)
219 1c7n_A Cystalysin; transferase 99.9 3.2E-22 1.1E-26 261.8 25.3 316 1403-1765 43-389 (399)
220 2fyf_A PSAT, phosphoserine ami 99.9 2.6E-22 8.8E-27 262.3 24.3 326 1398-1765 44-394 (398)
221 2zc0_A Alanine glyoxylate tran 99.9 1.6E-22 5.5E-27 265.4 22.3 316 9-369 50-400 (407)
222 4e81_A Chaperone protein DNAK; 99.9 3.9E-23 1.3E-27 238.6 14.3 136 1008-1145 1-136 (219)
223 1d2f_A MALY protein; aminotran 99.9 6.1E-22 2.1E-26 258.2 27.5 316 1403-1765 40-385 (390)
224 3ele_A Amino transferase; RER0 99.9 5.3E-22 1.8E-26 259.6 27.0 317 1403-1765 47-392 (398)
225 3b46_A Aminotransferase BNA3; 99.9 3.3E-22 1.1E-26 265.1 25.2 318 1404-1764 70-442 (447)
226 1iay_A ACC synthase 2, 1-amino 99.9 1.7E-22 5.8E-27 266.8 22.1 289 43-369 85-423 (428)
227 2gb3_A Aspartate aminotransfer 99.9 3.5E-22 1.2E-26 262.1 24.7 314 1404-1765 56-398 (409)
228 2x5d_A Probable aminotransfera 99.9 1.8E-22 6.2E-27 265.2 22.1 314 1404-1765 50-394 (412)
229 3op7_A Aminotransferase class 99.9 3.5E-22 1.2E-26 259.1 24.5 288 43-369 65-367 (375)
230 3nra_A Aspartate aminotransfer 99.9 5.8E-23 2E-27 269.7 17.3 320 1403-1765 52-401 (407)
231 1b9h_A AHBA synthase, protein 99.9 4.6E-22 1.6E-26 259.2 25.6 330 11-369 17-384 (388)
232 2qma_A Diaminobutyrate-pyruvat 99.9 1.4E-21 4.6E-26 262.5 30.7 342 1395-1765 101-492 (497)
233 3ezs_A Aminotransferase ASPB; 99.9 3.5E-22 1.2E-26 259.2 24.1 312 8-369 36-371 (376)
234 3b8x_A WBDK, pyridoxamine 5-ph 99.9 8.9E-22 3.1E-26 256.5 27.9 330 1403-1763 11-390 (390)
235 1wyu_B Glycine dehydrogenase s 99.9 1.5E-21 5.2E-26 260.0 30.5 333 1403-1765 76-437 (474)
236 2cb1_A O-acetyl homoserine sul 99.9 2.2E-21 7.6E-26 254.1 31.5 305 40-368 55-411 (412)
237 1uu1_A Histidinol-phosphate am 99.9 4.1E-22 1.4E-26 254.0 23.9 297 1-368 24-333 (335)
238 1n8p_A Cystathionine gamma-lya 99.9 1.3E-22 4.3E-27 263.4 19.4 306 33-368 47-390 (393)
239 2vi8_A Serine hydroxymethyltra 99.9 1.2E-22 3.9E-27 266.6 19.2 336 2-369 28-383 (405)
240 2o1b_A Aminotransferase, class 99.9 4E-22 1.4E-26 260.9 24.0 314 1404-1765 60-399 (404)
241 3uwc_A Nucleotide-sugar aminot 99.9 6.5E-23 2.2E-27 265.9 16.3 328 1409-1765 21-367 (374)
242 2fq6_A Cystathionine beta-lyas 99.9 3.6E-22 1.2E-26 259.3 23.2 301 1436-1764 81-413 (415)
243 1yiz_A Kynurenine aminotransfe 99.9 1.1E-21 3.8E-26 259.2 28.2 318 1404-1764 50-424 (429)
244 2zyj_A Alpha-aminodipate amino 99.9 1.8E-22 6.2E-27 263.8 20.4 316 1405-1765 48-389 (397)
245 1js3_A DDC;, DOPA decarboxylas 99.9 1.9E-21 6.6E-26 260.6 30.8 329 1405-1765 86-470 (486)
246 3lvl_A NIFU-like protein; prot 99.9 2.7E-23 9.1E-28 217.1 9.7 96 1769-1864 2-97 (129)
247 3if2_A Aminotransferase; YP_26 99.9 2E-22 6.9E-27 267.6 20.9 336 8-369 43-436 (444)
248 2ych_A Competence protein PILM 99.9 3.2E-23 1.1E-27 268.0 12.6 314 2032-2391 12-372 (377)
249 2okj_A Glutamate decarboxylase 99.9 3.2E-21 1.1E-25 259.3 32.3 311 1429-1764 124-497 (504)
250 3nyt_A Aminotransferase WBPE; 99.9 5.3E-23 1.8E-27 265.7 14.3 328 8-368 13-359 (367)
251 3aow_A Putative uncharacterize 99.9 1.2E-21 4.1E-26 259.1 27.1 316 1405-1765 92-441 (448)
252 3tqx_A 2-amino-3-ketobutyrate 99.9 5.2E-22 1.8E-26 259.9 23.5 318 1404-1765 57-392 (399)
253 3qgu_A LL-diaminopimelate amin 99.9 1E-21 3.5E-26 261.1 26.3 321 8-369 82-436 (449)
254 1svv_A Threonine aldolase; str 99.9 7.3E-22 2.5E-26 254.5 24.1 319 1395-1765 15-354 (359)
255 3op7_A Aminotransferase class 99.9 7.4E-22 2.5E-26 256.0 24.2 288 1439-1765 65-367 (375)
256 3lvl_A NIFU-like protein; prot 99.9 3.3E-23 1.1E-27 216.3 9.2 96 373-468 2-97 (129)
257 1fc4_A 2-amino-3-ketobutyrate 99.9 9.6E-22 3.3E-26 257.4 25.4 315 1405-1765 60-393 (401)
258 1js3_A DDC;, DOPA decarboxylas 99.9 2.4E-21 8.2E-26 259.7 29.3 326 12-369 89-470 (486)
259 3fvs_A Kynurenine--oxoglutarat 99.9 5.3E-22 1.8E-26 261.8 22.7 320 1403-1765 40-418 (422)
260 3vp6_A Glutamate decarboxylase 99.9 5.6E-21 1.9E-25 255.8 32.5 312 33-369 127-501 (511)
261 2rfv_A Methionine gamma-lyase; 99.9 2.1E-22 7.1E-27 262.9 18.2 303 1435-1764 62-395 (398)
262 1o69_A Aminotransferase; struc 99.9 6.3E-22 2.2E-26 258.0 22.6 329 8-369 9-383 (394)
263 3jtx_A Aminotransferase; NP_28 99.9 1.7E-21 5.8E-26 254.7 26.7 322 1403-1764 42-393 (396)
264 3vp6_A Glutamate decarboxylase 99.9 6.7E-21 2.3E-25 255.1 32.2 329 1406-1764 109-500 (511)
265 3piu_A 1-aminocyclopropane-1-c 99.9 1.2E-21 4E-26 259.3 24.5 289 43-369 88-428 (435)
266 1pff_A Methionine gamma-lyase; 99.9 6.3E-22 2.2E-26 251.9 21.0 296 1441-1764 2-329 (331)
267 3dqg_A Heat shock 70 kDa prote 99.9 4.5E-22 1.5E-26 215.3 16.4 125 2406-2530 2-126 (151)
268 2r2n_A Kynurenine/alpha-aminoa 99.9 3.7E-21 1.3E-25 253.4 28.8 295 41-369 82-420 (425)
269 3ezs_A Aminotransferase ASPB; 99.9 2E-21 6.7E-26 252.2 25.7 313 1403-1765 35-371 (376)
270 3ei9_A LL-diaminopimelate amin 99.9 1.8E-21 6.1E-26 257.4 25.7 316 8-368 69-423 (432)
271 1mdo_A ARNB aminotransferase; 99.9 2.3E-21 7.9E-26 253.1 26.5 332 7-368 16-381 (393)
272 1b9h_A AHBA synthase, protein 99.9 1.4E-21 4.9E-26 254.5 24.2 330 1406-1764 16-383 (388)
273 1vp4_A Aminotransferase, putat 99.9 4.4E-22 1.5E-26 262.5 19.5 316 1405-1765 59-414 (425)
274 2a7v_A Serine hydroxymethyltra 99.9 1.1E-21 3.8E-26 257.1 23.1 355 1365-1765 39-437 (490)
275 2oga_A Transaminase; PLP-depen 99.9 3.1E-21 1.1E-25 252.1 27.3 328 10-369 43-392 (399)
276 2c81_A Glutamine-2-deoxy-scyll 99.9 7.9E-22 2.7E-26 259.5 21.6 343 8-369 13-410 (418)
277 1k8k_A ARP3, actin-like protei 99.9 3.5E-22 1.2E-26 261.2 17.9 306 638-996 6-386 (418)
278 2zc0_A Alanine glyoxylate tran 99.9 2.1E-21 7.2E-26 254.7 25.3 316 1405-1765 50-400 (407)
279 1qgn_A Protein (cystathionine 99.9 1.8E-21 6.3E-26 253.7 24.4 305 1429-1765 106-441 (445)
280 2bwn_A 5-aminolevulinate synth 99.9 1.5E-21 5.2E-26 255.5 23.7 319 1405-1765 61-396 (401)
281 2x3l_A ORN/Lys/Arg decarboxyla 99.9 3.3E-22 1.1E-26 263.6 17.4 277 41-369 57-349 (446)
282 3qhx_A Cystathionine gamma-syn 99.9 1.8E-21 6.1E-26 252.6 23.7 308 32-367 57-392 (392)
283 1v72_A Aldolase; PLP-dependent 99.9 2.2E-21 7.4E-26 249.7 24.4 314 1-369 12-349 (356)
284 1gc0_A Methionine gamma-lyase; 99.9 2.6E-21 8.8E-26 252.4 25.2 308 1429-1764 57-396 (398)
285 3g7q_A Valine-pyruvate aminotr 99.9 7.4E-22 2.5E-26 260.0 20.0 299 42-369 76-409 (417)
286 3e2y_A Kynurenine-oxoglutarate 99.9 2.2E-21 7.5E-26 254.9 24.4 319 1403-1764 35-408 (410)
287 3if2_A Aminotransferase; YP_26 99.9 5.7E-22 2E-26 263.3 18.9 343 1397-1765 36-436 (444)
288 2cb1_A O-acetyl homoserine sul 99.9 4.8E-21 1.6E-25 250.9 27.3 304 1437-1764 56-411 (412)
289 3dr4_A Putative perosamine syn 99.9 1E-21 3.6E-26 256.0 21.0 330 8-369 33-389 (391)
290 3asa_A LL-diaminopimelate amin 99.9 1.6E-21 5.6E-26 254.9 22.8 321 2-369 39-389 (400)
291 4a2a_A Cell division protein F 99.9 2.7E-21 9.2E-26 248.7 24.3 328 633-997 4-393 (419)
292 1o69_A Aminotransferase; struc 99.9 1.7E-21 5.8E-26 254.0 22.8 330 1405-1765 10-383 (394)
293 3dob_A Heat shock 70 kDa prote 99.9 7.2E-22 2.5E-26 213.9 15.9 124 2406-2529 2-126 (152)
294 3nyt_A Aminotransferase WBPE; 99.9 3.5E-22 1.2E-26 258.0 16.1 332 1404-1764 13-359 (367)
295 3kki_A CAI-1 autoinducer synth 99.9 7.1E-21 2.4E-25 249.7 28.6 315 8-369 73-400 (409)
296 2z7e_A ISCU protein, NIFU-like 99.9 1.1E-22 3.8E-27 217.6 8.8 95 1767-1864 1-96 (157)
297 3tcm_A Alanine aminotransferas 99.9 5.2E-21 1.8E-25 256.2 27.2 321 1405-1764 107-489 (500)
298 3ju7_A Putative PLP-dependent 99.9 4.1E-22 1.4E-26 256.9 15.7 338 1398-1764 7-370 (377)
299 3fkd_A L-threonine-O-3-phospha 99.9 3.6E-21 1.2E-25 246.9 24.5 300 1402-1764 26-337 (350)
300 1n8p_A Cystathionine gamma-lya 99.9 7.2E-22 2.4E-26 256.3 17.9 299 1436-1764 54-390 (393)
301 3dr4_A Putative perosamine syn 99.9 1.3E-21 4.5E-26 255.1 20.4 332 1404-1764 33-388 (391)
302 1e5e_A MGL, methionine gamma-l 99.9 3.9E-21 1.3E-25 250.5 24.8 304 34-369 55-391 (404)
303 2vi8_A Serine hydroxymethyltra 99.9 1E-21 3.4E-26 257.7 19.2 331 1403-1765 33-383 (405)
304 1iay_A ACC synthase 2, 1-amino 99.9 2E-21 6.7E-26 256.7 21.4 289 1439-1765 85-423 (428)
305 3tcm_A Alanine aminotransferas 99.9 8.3E-21 2.9E-25 254.2 27.7 324 9-369 107-490 (500)
306 2r2n_A Kynurenine/alpha-aminoa 99.9 9.7E-21 3.3E-25 249.5 27.6 294 1438-1765 83-420 (425)
307 3h0x_A 78 kDa glucose-regulate 99.9 1.3E-21 4.4E-26 212.7 15.7 124 2406-2529 2-126 (152)
308 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 5.2E-21 1.8E-25 252.9 24.9 336 7-369 39-432 (437)
309 4eb5_C NIFU protein (NIFU-1); 99.9 2.2E-22 7.4E-27 213.1 9.2 92 1770-1865 1-92 (153)
310 2z7e_A ISCU protein, NIFU-like 99.9 1.9E-22 6.4E-27 215.9 8.7 95 371-468 1-96 (157)
311 4e1o_A HDC, histidine decarbox 99.9 4.2E-20 1.4E-24 246.2 33.3 325 1406-1764 92-473 (481)
312 2dkj_A Serine hydroxymethyltra 99.9 1.7E-21 5.9E-26 255.7 19.7 331 4-369 30-384 (407)
313 2x3l_A ORN/Lys/Arg decarboxyla 99.9 8.2E-22 2.8E-26 259.8 16.2 276 1437-1764 57-348 (446)
314 3piu_A 1-aminocyclopropane-1-c 99.9 5.2E-21 1.8E-25 253.1 23.9 289 1439-1765 88-428 (435)
315 2oga_A Transaminase; PLP-depen 99.9 7.7E-21 2.6E-25 248.3 25.2 328 1406-1765 43-392 (399)
316 3k40_A Aromatic-L-amino-acid d 99.9 2.3E-20 7.9E-25 247.8 30.0 324 1407-1765 88-467 (475)
317 3ju7_A Putative PLP-dependent 99.9 6.6E-22 2.3E-26 254.9 14.7 331 8-369 13-371 (377)
318 1mdo_A ARNB aminotransferase; 99.9 6.3E-21 2.2E-25 249.0 24.1 330 1405-1764 18-381 (393)
319 3qgu_A LL-diaminopimelate amin 99.9 6.6E-21 2.3E-25 253.3 24.6 322 1403-1765 81-436 (449)
320 1cs1_A CGS, protein (cystathio 99.9 1.4E-20 5E-25 244.5 27.2 308 33-369 44-383 (386)
321 3kki_A CAI-1 autoinducer synth 99.9 1.5E-20 5E-25 246.7 27.2 315 1404-1765 73-400 (409)
322 3k40_A Aromatic-L-amino-acid d 99.9 2.3E-20 7.9E-25 247.8 29.2 307 33-369 105-467 (475)
323 3ndn_A O-succinylhomoserine su 99.9 2.4E-20 8.1E-25 242.6 28.5 306 33-366 73-413 (414)
324 3cog_A Cystathionine gamma-lya 99.9 4.6E-21 1.6E-25 249.3 21.7 299 41-368 67-397 (403)
325 4eb5_C NIFU protein (NIFU-1); 99.9 3.3E-22 1.1E-26 211.7 8.8 92 374-469 1-92 (153)
326 2fxu_A Alpha-actin-1, actin, a 99.9 9.8E-22 3.4E-26 252.4 15.0 306 638-996 6-348 (375)
327 2c81_A Glutamine-2-deoxy-scyll 99.9 2.3E-21 7.9E-26 255.1 18.7 341 1404-1765 13-410 (418)
328 3acz_A Methionine gamma-lyase; 99.9 9.3E-21 3.2E-25 246.0 24.1 303 33-367 51-387 (389)
329 1uu1_A Histidinol-phosphate am 99.9 8.9E-21 3.1E-25 241.6 23.3 300 1394-1764 20-333 (335)
330 3ez1_A Aminotransferase MOCR f 99.9 2.1E-20 7.2E-25 246.4 27.6 295 42-369 71-411 (423)
331 4e1o_A HDC, histidine decarbox 99.9 8E-20 2.7E-24 243.5 33.1 308 33-369 110-474 (481)
332 3n8e_A Stress-70 protein, mito 99.9 2E-21 6.9E-26 216.1 14.7 129 2401-2529 17-145 (182)
333 3g7q_A Valine-pyruvate aminotr 99.9 3.2E-21 1.1E-25 253.9 19.4 298 1439-1765 77-409 (417)
334 3ei9_A LL-diaminopimelate amin 99.9 9E-21 3.1E-25 250.7 23.5 317 1403-1764 68-423 (432)
335 2qq4_A Iron-sulfur cluster bio 99.9 4.2E-22 1.4E-26 211.0 8.5 92 1767-1862 4-95 (138)
336 3n0l_A Serine hydroxymethyltra 99.9 4E-21 1.4E-25 253.0 19.8 336 1398-1766 30-386 (417)
337 4e81_A Chaperone protein DNAK; 99.9 3E-21 1E-25 223.0 16.1 127 2404-2530 1-127 (219)
338 2dkj_A Serine hydroxymethyltra 99.9 3.7E-21 1.2E-25 252.5 19.2 335 1397-1765 27-384 (407)
339 2op6_A Heat shock 70 kDa prote 99.9 2.8E-21 9.6E-26 212.2 15.1 133 1010-1144 2-135 (152)
340 3qhx_A Cystathionine gamma-syn 99.9 6.1E-21 2.1E-25 247.6 21.0 304 1435-1762 64-391 (392)
341 2x5f_A Aspartate_tyrosine_phen 99.9 4.6E-21 1.6E-25 253.3 20.1 291 43-369 90-425 (430)
342 3ppl_A Aspartate aminotransfer 99.9 8E-21 2.8E-25 250.6 22.2 296 42-369 79-416 (427)
343 3n0l_A Serine hydroxymethyltra 99.9 4.5E-21 1.5E-25 252.6 19.7 333 4-369 32-385 (417)
344 1k8k_A ARP3, actin-like protei 99.9 3.1E-21 1.1E-25 252.2 18.0 306 2034-2392 6-386 (418)
345 1jg8_A L-ALLO-threonine aldola 99.8 5E-21 1.7E-25 245.4 19.0 313 1-369 8-342 (347)
346 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 1.9E-20 6.6E-25 247.5 25.0 334 1404-1765 40-432 (437)
347 2qq4_A Iron-sulfur cluster bio 99.8 6.8E-22 2.3E-26 209.4 8.5 90 371-464 4-93 (138)
348 3d6k_A Putative aminotransfera 99.8 1.9E-20 6.6E-25 246.3 24.4 293 43-369 78-414 (422)
349 4a2a_A Cell division protein F 99.8 4.1E-20 1.4E-24 237.7 26.7 198 2175-2393 168-393 (419)
350 2a7v_A Serine hydroxymethyltra 99.8 1.7E-20 5.9E-25 245.8 23.4 332 4-369 61-437 (490)
351 1v72_A Aldolase; PLP-dependent 99.8 2.3E-20 7.8E-25 240.2 24.2 308 1403-1765 18-349 (356)
352 2ctz_A O-acetyl-L-homoserine s 99.8 5.1E-20 1.7E-24 241.4 27.7 311 34-365 51-419 (421)
353 1ibj_A CBL, cystathionine beta 99.8 5.8E-21 2E-25 251.3 18.7 301 40-369 132-458 (464)
354 3ez1_A Aminotransferase MOCR f 99.8 5.1E-20 1.8E-24 242.8 27.6 294 1439-1765 72-411 (423)
355 2po3_A 4-dehydrase; external a 99.8 1.5E-19 5.1E-24 238.1 31.8 331 8-369 29-382 (424)
356 1e5e_A MGL, methionine gamma-l 99.8 1.2E-20 4.1E-25 245.9 21.0 296 1437-1765 62-391 (404)
357 1cs1_A CGS, protein (cystathio 99.8 5.9E-20 2E-24 238.8 26.9 300 1436-1764 51-382 (386)
358 2eh6_A Acoat, acetylornithine 99.8 7E-20 2.4E-24 237.5 27.4 303 9-368 45-373 (375)
359 1c4k_A Protein (ornithine deca 99.8 5.6E-20 1.9E-24 251.1 27.2 295 42-369 174-562 (730)
360 3rq1_A Aminotransferase class 99.8 2E-20 6.8E-25 246.3 22.1 316 2-369 50-411 (418)
361 3ihj_A Alanine aminotransferas 99.8 4.7E-20 1.6E-24 246.3 25.9 322 10-369 103-489 (498)
362 3ppl_A Aspartate aminotransfer 99.8 1.9E-20 6.4E-25 247.1 21.4 295 1439-1765 80-416 (427)
363 2x5f_A Aspartate_tyrosine_phen 99.8 1.3E-20 4.3E-25 249.1 19.8 291 1439-1765 90-425 (430)
364 2po3_A 4-dehydrase; external a 99.8 2.1E-19 7.2E-24 236.7 31.1 334 1401-1765 26-382 (424)
365 3gbx_A Serine hydroxymethyltra 99.8 6.8E-21 2.3E-25 251.1 16.9 333 4-369 37-392 (420)
366 3cog_A Cystathionine gamma-lya 99.8 2.7E-20 9.1E-25 242.2 21.7 298 1437-1764 67-397 (403)
367 3asa_A LL-diaminopimelate amin 99.8 2.9E-20 9.8E-25 243.1 21.9 315 1403-1764 45-388 (400)
368 3ruy_A Ornithine aminotransfer 99.8 1.7E-19 5.7E-24 235.3 29.0 308 9-369 53-390 (392)
369 3d6k_A Putative aminotransfera 99.8 4.3E-20 1.5E-24 243.1 23.4 293 1439-1765 78-414 (422)
370 3fsl_A Aromatic-amino-acid ami 99.8 1.1E-20 3.7E-25 247.2 17.4 315 2-368 38-395 (397)
371 3t18_A Aminotransferase class 99.8 4.4E-20 1.5E-24 242.5 22.5 316 2-368 49-409 (413)
372 1q5l_A Chaperone protein DNAK; 99.8 7.7E-21 2.6E-25 202.1 12.1 122 1005-1126 14-135 (135)
373 3acz_A Methionine gamma-lyase; 99.8 4.2E-20 1.4E-24 239.9 21.4 298 1436-1763 58-387 (389)
374 3ndn_A O-succinylhomoserine su 99.8 1.3E-19 4.6E-24 235.5 26.2 299 1435-1761 79-412 (414)
375 2fxu_A Alpha-actin-1, actin, a 99.8 9.6E-21 3.3E-25 243.2 14.9 305 2035-2392 7-348 (375)
376 3ihj_A Alanine aminotransferas 99.8 8.5E-20 2.9E-24 243.9 24.6 319 1404-1764 101-488 (498)
377 1xjs_A NIFU-like protein; SR17 99.8 2E-21 6.7E-26 207.9 6.9 88 1767-1859 7-94 (147)
378 1jg8_A L-ALLO-threonine aldola 99.8 1.8E-20 6.1E-25 240.2 16.8 318 1392-1765 2-342 (347)
379 1su0_B NIFU like protein ISCU; 99.8 3.5E-21 1.2E-25 208.2 8.4 88 1767-1859 6-93 (159)
380 1ibj_A CBL, cystathionine beta 99.8 2.2E-20 7.5E-25 245.9 17.9 299 1438-1765 134-458 (464)
381 1xjs_A NIFU-like protein; SR17 99.8 2.8E-21 9.6E-26 206.7 7.1 88 371-463 7-94 (147)
382 7aat_A Aspartate aminotransfer 99.8 4.5E-20 1.5E-24 241.5 19.9 316 1-369 39-399 (401)
383 2ctz_A O-acetyl-L-homoserine s 99.8 2.4E-19 8.2E-24 235.0 26.4 303 1437-1764 58-418 (421)
384 3ri6_A O-acetylhomoserine sulf 99.8 1.9E-19 6.6E-24 234.2 25.3 312 33-365 74-428 (430)
385 4f4e_A Aromatic-amino-acid ami 99.8 2.2E-20 7.4E-25 245.8 16.6 314 2-369 61-418 (420)
386 3gbx_A Serine hydroxymethyltra 99.8 2.2E-20 7.5E-25 246.3 16.6 329 1404-1765 41-392 (420)
387 1su0_B NIFU like protein ISCU; 99.8 4.7E-21 1.6E-25 207.1 8.3 88 371-463 6-93 (159)
388 1c4k_A Protein (ornithine deca 99.8 1E-19 3.4E-24 248.6 23.1 295 1438-1764 174-561 (730)
389 2ay1_A Aroat, aromatic amino a 99.8 1.3E-20 4.6E-25 245.9 13.9 314 4-369 40-392 (394)
390 3f6t_A Aspartate aminotransfer 99.8 7.7E-20 2.6E-24 246.1 21.5 284 58-369 164-521 (533)
391 3rq1_A Aminotransferase class 99.8 7E-20 2.4E-24 241.1 20.6 312 1402-1765 54-411 (418)
392 1u00_A HSC66, chaperone protei 99.8 2.5E-20 8.6E-25 218.1 14.3 138 1011-1150 1-138 (227)
393 2aeu_A Hypothetical protein MJ 99.8 8.4E-20 2.9E-24 235.5 19.9 303 6-369 39-367 (374)
394 2op6_A Heat shock 70 kDa prote 99.8 7.6E-20 2.6E-24 200.8 16.2 125 2406-2530 2-127 (152)
395 2q7w_A Aspartate aminotransfer 99.8 2E-20 6.8E-25 244.5 13.8 317 2-368 38-394 (396)
396 3b1d_A Betac-S lyase; HET: PLP 99.7 7.8E-22 2.7E-26 257.3 0.0 315 8-368 44-388 (392)
397 2eh6_A Acoat, acetylornithine 99.8 1.2E-18 4E-23 225.9 29.8 303 1405-1764 45-373 (375)
398 1yaa_A Aspartate aminotransfer 99.8 1.6E-20 5.4E-25 246.8 11.7 315 1-369 40-407 (412)
399 1vef_A Acetylornithine/acetyl- 99.8 4.5E-19 1.5E-23 231.5 25.2 306 7-369 60-393 (395)
400 3bwn_A AT1G70560, L-tryptophan 99.8 5.7E-20 2E-24 238.7 16.3 279 44-369 71-383 (391)
401 1s0a_A Adenosylmethionine-8-am 99.8 1.2E-18 4E-23 230.1 29.0 320 9-369 60-420 (429)
402 3ruy_A Ornithine aminotransfer 99.8 2.4E-18 8.1E-23 224.4 31.6 308 1405-1765 53-390 (392)
403 3t18_A Aminotransferase class 99.8 2.2E-19 7.5E-24 235.9 21.8 312 1402-1764 53-409 (413)
404 3fsl_A Aromatic-amino-acid ami 99.8 2.3E-19 7.8E-24 234.6 21.1 341 1366-1764 10-395 (397)
405 3f6t_A Aspartate aminotransfer 99.8 2.6E-19 8.7E-24 241.1 21.9 321 1406-1765 117-521 (533)
406 1q5l_A Chaperone protein DNAK; 99.8 5.5E-20 1.9E-24 195.6 12.0 121 2402-2522 15-135 (135)
407 2aeu_A Hypothetical protein MJ 99.8 3E-19 1E-23 230.4 21.2 302 1402-1765 39-367 (374)
408 7aat_A Aspartate aminotransfer 99.8 1.7E-19 5.9E-24 236.0 19.2 339 1366-1765 12-399 (401)
409 3meb_A Aspartate aminotransfer 99.8 2.5E-19 8.4E-24 237.2 20.2 317 1-369 60-440 (448)
410 3bwn_A AT1G70560, L-tryptophan 99.8 9.4E-20 3.2E-24 236.7 15.8 278 1440-1764 71-382 (391)
411 1ajs_A Aspartate aminotransfer 99.8 9.1E-20 3.1E-24 239.5 15.7 318 2-369 42-407 (412)
412 2zgy_A Plasmid segregation pro 99.8 1.1E-19 3.7E-24 228.3 15.3 226 739-995 73-319 (320)
413 2ord_A Acoat, acetylornithine 99.8 9E-19 3.1E-23 228.8 24.6 307 7-369 55-393 (397)
414 4f4e_A Aromatic-amino-acid ami 99.8 4.5E-19 1.5E-23 233.3 21.5 310 1402-1765 65-418 (420)
415 2ay1_A Aroat, aromatic amino a 99.8 1.1E-19 3.7E-24 237.3 15.3 311 1403-1765 43-392 (394)
416 3ri6_A O-acetylhomoserine sulf 99.8 1.2E-18 4E-23 226.8 24.7 308 1431-1763 76-426 (430)
417 2vyc_A Biodegradative arginine 99.8 8.8E-19 3E-23 242.3 24.0 230 41-286 205-482 (755)
418 2vyc_A Biodegradative arginine 99.8 1.2E-18 3.9E-23 241.2 24.9 223 1437-1675 205-466 (755)
419 4adb_A Succinylornithine trans 99.8 7.9E-19 2.7E-23 230.2 22.1 310 9-369 56-396 (406)
420 3ecd_A Serine hydroxymethyltra 99.8 3.2E-19 1.1E-23 235.5 18.5 332 1402-1765 41-393 (425)
421 3meb_A Aspartate aminotransfer 99.8 5.1E-19 1.7E-23 234.2 20.2 344 1365-1765 32-440 (448)
422 3h7f_A Serine hydroxymethyltra 99.8 5.6E-19 1.9E-23 233.7 20.4 334 4-369 52-410 (447)
423 3ecd_A Serine hydroxymethyltra 99.8 4.1E-19 1.4E-23 234.4 18.5 334 4-369 39-393 (425)
424 3h7f_A Serine hydroxymethyltra 99.8 5.2E-19 1.8E-23 234.0 19.2 332 1403-1766 55-411 (447)
425 1ax4_A Tryptophanase; tryptoph 99.8 3.1E-19 1.1E-23 238.5 17.2 331 1-369 46-437 (467)
426 2zgy_A Plasmid segregation pro 99.8 9.5E-20 3.3E-24 228.8 11.0 226 2135-2391 73-319 (320)
427 3b1d_A Betac-S lyase; HET: PLP 99.7 6.2E-21 2.1E-25 248.7 0.0 315 1404-1764 44-388 (392)
428 3nmy_A Xometc, cystathionine g 99.8 3.4E-18 1.2E-22 221.3 25.1 306 33-367 59-397 (400)
429 1ax4_A Tryptophanase; tryptoph 99.8 1.3E-18 4.4E-23 232.6 21.3 360 1368-1765 21-437 (467)
430 2q7w_A Aspartate aminotransfer 99.8 2.7E-19 9.2E-24 233.8 13.9 310 1403-1764 43-394 (396)
431 1s0a_A Adenosylmethionine-8-am 99.8 1.3E-17 4.4E-22 220.1 29.6 317 1405-1765 60-420 (429)
432 1yaa_A Aspartate aminotransfer 99.8 4E-19 1.4E-23 233.3 14.9 309 1403-1765 46-407 (412)
433 1vef_A Acetylornithine/acetyl- 99.8 8.3E-18 2.8E-22 219.5 27.3 304 1404-1764 61-392 (395)
434 1u00_A HSC66, chaperone protei 99.8 1.1E-18 3.9E-23 204.1 16.1 123 2407-2529 1-123 (227)
435 1sff_A 4-aminobutyrate aminotr 99.8 1.2E-17 4.2E-22 220.3 27.7 314 7-369 56-420 (426)
436 1ajs_A Aspartate aminotransfer 99.8 2.7E-18 9.2E-23 225.5 20.9 313 1403-1765 47-407 (412)
437 2ez2_A Beta-tyrosinase, tyrosi 99.8 4.2E-18 1.4E-22 226.8 22.3 301 41-369 75-427 (456)
438 2hox_A ALLIIN lyase 1; cystein 99.8 1.3E-18 4.4E-23 228.1 16.3 277 43-369 102-421 (427)
439 2pb2_A Acetylornithine/succiny 99.8 1.3E-17 4.5E-22 218.8 25.7 308 7-369 72-414 (420)
440 2ez2_A Beta-tyrosinase, tyrosi 99.8 1.5E-17 5E-22 221.5 26.5 352 1368-1765 20-427 (456)
441 3lws_A Aromatic amino acid bet 99.8 2.4E-18 8.3E-23 221.3 18.2 286 41-368 47-354 (357)
442 2eo5_A 419AA long hypothetical 99.8 4.1E-17 1.4E-21 214.3 29.5 305 10-369 61-414 (419)
443 3jzl_A Putative cystathionine 99.8 1E-17 3.4E-22 216.1 22.7 281 12-310 33-335 (409)
444 3i16_A Aluminum resistance pro 99.8 9.5E-18 3.2E-22 216.7 22.3 256 11-285 46-325 (427)
445 2zy4_A L-aspartate beta-decarb 99.8 8.2E-18 2.8E-22 226.0 22.5 286 58-369 165-518 (546)
446 4adb_A Succinylornithine trans 99.8 1.3E-17 4.3E-22 218.8 23.2 307 1405-1765 56-396 (406)
447 2ord_A Acoat, acetylornithine 99.8 4.8E-17 1.6E-21 212.4 28.6 305 1405-1765 57-393 (397)
448 3pj0_A LMO0305 protein; struct 99.8 6.9E-18 2.4E-22 217.2 20.2 289 41-368 48-357 (359)
449 3nx3_A Acoat, acetylornithine 99.8 2.3E-17 8E-22 215.2 25.0 309 9-369 53-391 (395)
450 3nmy_A Xometc, cystathionine g 99.8 2.1E-17 7.3E-22 213.8 24.0 299 1436-1763 66-397 (400)
451 3dxv_A Alpha-amino-epsilon-cap 99.8 4.6E-17 1.6E-21 215.5 26.9 313 9-369 60-421 (439)
452 1sff_A 4-aminobutyrate aminotr 99.7 3.1E-17 1.1E-21 216.4 25.3 312 1405-1765 58-420 (426)
453 3pj0_A LMO0305 protein; struct 99.7 3.3E-18 1.1E-22 220.2 15.3 289 1437-1764 48-357 (359)
454 3lws_A Aromatic amino acid bet 99.7 1.2E-17 4.2E-22 214.7 20.6 286 1438-1764 48-354 (357)
455 2hox_A ALLIIN lyase 1; cystein 99.7 3.3E-18 1.1E-22 224.2 14.7 276 1439-1764 102-420 (427)
456 1z7d_A Ornithine aminotransfer 99.7 1.1E-16 3.6E-21 210.9 29.0 308 9-369 82-425 (433)
457 3jzl_A Putative cystathionine 99.7 1.9E-17 6.5E-22 213.5 20.4 255 1407-1679 32-306 (409)
458 3i16_A Aluminum resistance pro 99.7 1.9E-17 6.6E-22 213.8 20.4 255 1407-1679 46-323 (427)
459 2eo5_A 419AA long hypothetical 99.7 2.3E-16 7.8E-21 207.2 30.4 305 1406-1765 61-414 (419)
460 3a8u_X Omega-amino acid--pyruv 99.7 7.6E-17 2.6E-21 214.0 25.9 323 7-369 65-443 (449)
461 4eu1_A Mitochondrial aspartate 99.7 2.1E-17 7.1E-22 216.7 20.0 281 43-369 81-407 (409)
462 3hvy_A Cystathionine beta-lyas 99.7 5.2E-17 1.8E-21 209.8 23.3 228 43-285 76-325 (427)
463 2zy4_A L-aspartate beta-decarb 99.7 2.5E-17 8.6E-22 221.3 20.3 286 1454-1765 165-518 (546)
464 1zod_A DGD, 2,2-dialkylglycine 99.7 1.4E-16 4.6E-21 210.7 26.9 321 8-369 59-428 (433)
465 3i4j_A Aminotransferase, class 99.7 4.1E-17 1.4E-21 215.3 21.7 327 9-369 46-424 (430)
466 2pb2_A Acetylornithine/succiny 99.7 2.6E-16 8.9E-21 206.5 28.1 307 1404-1765 73-414 (420)
467 3ou5_A Serine hydroxymethyltra 99.7 1.7E-16 5.7E-21 195.7 24.2 355 1365-1765 39-437 (490)
468 2oat_A Ornithine aminotransfer 99.7 5E-16 1.7E-20 204.6 30.8 308 9-369 93-435 (439)
469 2oqx_A Tryptophanase; lyase, p 99.7 9.5E-18 3.3E-22 224.1 14.4 330 1-369 44-438 (467)
470 3k7y_A Aspartate aminotransfer 99.7 1.6E-16 5.6E-21 205.5 25.2 340 1366-1765 13-401 (405)
471 3hvy_A Cystathionine beta-lyas 99.7 9.8E-17 3.3E-21 207.2 21.2 253 1407-1680 47-324 (427)
472 3nx3_A Acoat, acetylornithine 99.7 6.2E-16 2.1E-20 201.7 29.0 309 1405-1765 53-391 (395)
473 1z7d_A Ornithine aminotransfer 99.7 1.1E-15 3.9E-20 201.0 31.0 308 1405-1765 82-425 (433)
474 3k7y_A Aspartate aminotransfer 99.7 1.4E-16 4.7E-21 206.2 21.2 280 43-369 74-401 (405)
475 2oqx_A Tryptophanase; lyase, p 99.7 4.7E-17 1.6E-21 217.4 17.4 353 1369-1765 20-438 (467)
476 1zod_A DGD, 2,2-dialkylglycine 99.7 5.2E-16 1.8E-20 205.1 26.8 320 1405-1765 60-428 (433)
477 3a8u_X Omega-amino acid--pyruv 99.7 3.5E-16 1.2E-20 207.6 24.7 321 1405-1765 67-443 (449)
478 2cjg_A L-lysine-epsilon aminot 99.7 2.9E-16 9.9E-21 207.7 23.5 319 8-369 70-444 (449)
479 3dxv_A Alpha-amino-epsilon-cap 99.7 5.6E-16 1.9E-20 205.1 26.1 313 1405-1765 60-421 (439)
480 3n5m_A Adenosylmethionine-8-am 99.7 3.5E-15 1.2E-19 198.1 31.9 327 8-369 65-448 (452)
481 3n75_A LDC, lysine decarboxyla 99.7 5.9E-16 2E-20 209.1 24.4 310 42-369 196-556 (715)
482 4eu1_A Mitochondrial aspartate 99.7 2.3E-16 7.9E-21 206.7 20.0 282 1439-1765 81-407 (409)
483 3i4j_A Aminotransferase, class 99.7 6.2E-16 2.1E-20 204.1 24.0 327 1405-1765 46-424 (430)
484 2oat_A Ornithine aminotransfer 99.7 3.3E-15 1.1E-19 196.7 30.6 308 1405-1765 93-435 (439)
485 3n75_A LDC, lysine decarboxyla 99.7 8E-16 2.7E-20 207.8 25.0 309 1437-1764 195-555 (715)
486 3ht4_A Aluminum resistance pro 99.7 3.3E-16 1.1E-20 203.8 19.1 254 42-310 66-341 (431)
487 2cjg_A L-lysine-epsilon aminot 99.7 1.7E-15 5.7E-20 200.4 24.7 318 1405-1765 71-444 (449)
488 4h51_A Aspartate aminotransfer 99.7 2.3E-15 7.8E-20 194.3 25.0 349 1365-1765 28-413 (420)
489 3gju_A Putative aminotransfera 99.7 6.4E-15 2.2E-19 195.7 29.6 329 7-369 66-452 (460)
490 3dod_A Adenosylmethionine-8-am 99.7 1.3E-14 4.6E-19 192.0 31.6 324 8-369 60-439 (448)
491 3n5m_A Adenosylmethionine-8-am 99.7 2.4E-14 8.1E-19 190.1 33.8 327 1404-1765 65-448 (452)
492 3tfu_A Adenosylmethionine-8-am 99.7 1.1E-15 3.9E-20 201.9 20.7 322 8-369 91-449 (457)
493 4a6r_A Omega transaminase; tra 99.7 5.2E-15 1.8E-19 196.5 27.0 317 8-369 66-445 (459)
494 4ehu_A Activator of 2-hydroxyi 99.6 3.5E-16 1.2E-20 192.3 14.0 218 743-999 36-256 (276)
495 3l44_A Glutamate-1-semialdehyd 99.6 3E-15 1E-19 197.8 22.8 308 8-369 71-426 (434)
496 3dod_A Adenosylmethionine-8-am 99.6 2.1E-14 7.3E-19 190.1 30.2 324 1404-1765 60-439 (448)
497 4ffc_A 4-aminobutyrate aminotr 99.6 3.9E-14 1.3E-18 187.3 32.5 318 8-369 80-445 (453)
498 3fq8_A Glutamate-1-semialdehyd 99.6 4.1E-16 1.4E-20 205.5 13.4 306 9-369 69-423 (427)
499 3hmu_A Aminotransferase, class 99.6 1.1E-14 3.7E-19 193.1 26.7 320 7-369 70-448 (472)
500 1k8k_B ARP2, actin-like protei 99.6 5.7E-17 2E-21 208.9 4.6 212 767-996 106-363 (394)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.3e-80 Score=840.66 Aligned_cols=500 Identities=41% Similarity=0.628 Sum_probs=471.5
Q ss_pred eEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCCCCCCCCC
Q psy15216 638 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNINT 717 (2602)
Q Consensus 638 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~~ 717 (2602)
.+||||||||||+||++++|.|++++|..|++++||+|+|.++++++||..|+.+...+|.++++++||+||+++++...
T Consensus 3 ~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 82 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp CEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHHH
T ss_pred cEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHHH
Confidence 58999999999999999999999999999999999999999888899999999999999999999999999999887422
Q ss_pred ----CCCCeeee-cCCCceEEEEeCceeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHHHHHHHHHHHHcC
Q psy15216 718 ----NSFPYDFQ-NKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAG 792 (2602)
Q Consensus 718 ----~~~~~~~~-~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~~~~Aa~~AG 792 (2602)
..+||.+. ..+|.+.+...++.++|+++++++|++|++.|+.++|.++.++|||||+||++.||++|++|+++||
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~AG 162 (605)
T 4b9q_A 83 QRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAG 162 (605)
T ss_dssp HHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTT
T ss_pred HHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 37899887 5678888888889999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEechhHHHHHHhhhccCcccceEEEEEeCCceEEEEEEEEEC----CEEEEEEEecCCCCcchHHHHHHHHHHHH
Q psy15216 793 LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKN----GVFKVLSVGGDSNLGGDDFDYCLFSWIVK 868 (2602)
Q Consensus 793 l~~~~li~EPtAAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~----~~~~v~~~~g~~~lGG~~~D~~l~~~l~~ 868 (2602)
|+++++|+||+|||++|++.....++.++|||+||||||+|++++.+ +.++++++.|+.++||++||++|++|+.+
T Consensus 163 l~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 4b9q_A 163 LEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp CEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred CceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHH
Confidence 99999999999999999988765678999999999999999999988 89999999999999999999999999999
Q ss_pred HHhhcc-----CCHHHHHHHHHHHHHHHHHcccccceEEEEEe-----cCCceEEEEeCHHHHHHHHHHHHHHHHHHHHH
Q psy15216 869 NAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVKL-----SDKKIVNITIDMKQFFTITQHLVNRTILLSSK 938 (2602)
Q Consensus 869 ~~~~~~-----~~~~~~~~l~~~~e~~K~~LS~~~~~~~~i~~-----~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~ 938 (2602)
+|..+. .+++.+.+|+.+||++|+.||...++.+.++. .++.++.++|||++|+++++|+++++..++++
T Consensus 243 ~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~ 322 (605)
T 4b9q_A 243 EFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKV 322 (605)
T ss_dssp HHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 987544 47889999999999999999999988888873 13367899999999999999999999999999
Q ss_pred HHHHcCCCccccceEEEecCccchHHHHHHHHhhccCcccCcCCcchHhHHHHHHHhHHhcCCCCCCCceeeeccccccc
Q psy15216 939 ALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLSL 1018 (2602)
Q Consensus 939 ~l~~a~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~dv~~~~~ 1018 (2602)
+|+++++...+|+.|+||||+||+|+|+++|+++||.++..+.||++|||+|||++|+.+++.. +++.+.|++|++|
T Consensus 323 ~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~---~~~~l~dv~p~sl 399 (605)
T 4b9q_A 323 ALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDV---KDVLLLDVTPLSL 399 (605)
T ss_dssp HHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTSS---CSEEEECBCSSCE
T ss_pred HHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCCC---CceEEEeeeeeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999864 3789999999999
Q ss_pred eEeeeccEEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCCCCCccEEEEEEEEC
Q psy15216 1019 GIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVD 1098 (2602)
Q Consensus 1019 gi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~~d 1098 (2602)
|+++.+|.|.++|+|||+||+++++.|+|..|+|+.+.|.|||||+..+.+|..||+|.|+|+||.|+|.++|+|+|++|
T Consensus 400 gie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 479 (605)
T 4b9q_A 400 GIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDID 479 (605)
T ss_dssp EEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEEC
T ss_pred EEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEEEecCCceEEEEEecCCCCCHHHHHhhhhccccCC
Q psy15216 1099 ADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKNGAIFNENSG 1142 (2602)
Q Consensus 1099 ~~g~l~v~a~~~~~g~~~~~~~~~~~~l~~~~i~~~~~~~~~~g 1142 (2602)
.||+|+|+|+++.||++.+++|..+++||++||++|+ ++++-
T Consensus 480 ~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~ei~~~~--~~~~~ 521 (605)
T 4b9q_A 480 ADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMV--RDAEA 521 (605)
T ss_dssp TTSCEEEEEEETTTCCEECCEEESCCSCCHHHHHHHH--HHHHH
T ss_pred CCcEEEEEEEecCCCcEEEEEecCCCCCCHHHHHHHH--HHhhh
Confidence 9999999999999999999999999999999999987 44443
No 2
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=4.2e-78 Score=816.32 Aligned_cols=501 Identities=41% Similarity=0.628 Sum_probs=465.3
Q ss_pred eEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCCCCCCCCC
Q psy15216 638 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNINT 717 (2602)
Q Consensus 638 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~~ 717 (2602)
.+||||||||||+||++.+|.+++++|+.|.+++||+|+|.++++++||..|+.+...+|.++++++||+||+++.+...
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 47999999999999999999999999999999999999998778899999999999999999999999999998876432
Q ss_pred C----CCCeeee-cCCCceEEEEeCceeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHHHHHHHHHHHHcC
Q psy15216 718 N----SFPYDFQ-NKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAG 792 (2602)
Q Consensus 718 ~----~~~~~~~-~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~~~~Aa~~AG 792 (2602)
. .+||.+. ..+|.+.+...++.++|+++++++|++|++.|+.+++.++.++|||||+||++.||++|++|++.||
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~AG 162 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAG 162 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTTT
T ss_pred HHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 2 5788876 6678888887778899999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEechhHHHHHHhhhccCcccceEEEEEeCCceEEEEEEEEE----CCEEEEEEEecCCCCcchHHHHHHHHHHHH
Q psy15216 793 LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFK----NGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 868 (2602)
Q Consensus 793 l~~~~li~EPtAAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~----~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~ 868 (2602)
|+++++|+||+|||++|+++....++.+||||+||||||+|++++. ++.++|+++.|+.++||++||++|++|+.+
T Consensus 163 l~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 2kho_A 163 LEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp CEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHH
T ss_pred CceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999998765456799999999999999999998 789999999999999999999999999999
Q ss_pred HHhhcc-----CCHHHHHHHHHHHHHHHHHcccccceEEEEEe-cC---C-ceEEEEeCHHHHHHHHHHHHHHHHHHHHH
Q psy15216 869 NAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVKL-SD---K-KIVNITIDMKQFFTITQHLVNRTILLSSK 938 (2602)
Q Consensus 869 ~~~~~~-----~~~~~~~~l~~~~e~~K~~LS~~~~~~~~i~~-~~---~-~~~~~~itr~~fe~l~~~~~~~~~~~i~~ 938 (2602)
+|..+. .+++.+.+|+.+||++|+.||...++.+.++. .+ | .++.++|||++|+++++|+++++..+|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~ 322 (605)
T 2kho_A 243 EFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKV 322 (605)
T ss_dssp HHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 986543 46789999999999999999999888888873 22 3 56788999999999999999999999999
Q ss_pred HHHHcCCCccccceEEEecCccchHHHHHHHHhhccCcccCcCCcchHhHHHHHHHhHHhcCCCCCCCceeeeccccccc
Q psy15216 939 ALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLSL 1018 (2602)
Q Consensus 939 ~l~~a~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~dv~~~~~ 1018 (2602)
+|+++++.+.+|+.|+||||+||+|+|+++|+++||.++..+.||++|||+|||++|+.+++.. +++.+.|++|++|
T Consensus 323 ~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~~---~~~~l~dv~p~sl 399 (605)
T 2kho_A 323 ALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDV---KDVLLLDVTPLSL 399 (605)
T ss_dssp HHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTSC---CCCCCSBCCCCCE
T ss_pred HHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCCc---cCceEEeeeeeec
Confidence 9999999999999999999999999999999999999999999999999999999999998752 4688999999999
Q ss_pred eEeeeccEEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCCCCCccEEEEEEEEC
Q psy15216 1019 GIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVD 1098 (2602)
Q Consensus 1019 gi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~~d 1098 (2602)
|+++.++.|.++|+||++||+++++.|+|..|+|+.+.|.|||||+..+.+|..||+|.|+++||.|+|.++|+|+|++|
T Consensus 400 gi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 479 (605)
T 2kho_A 400 GIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDID 479 (605)
T ss_dssp EEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEEC
T ss_pred cccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEEEecCCceEEEEEecCCCCCHHHHHhhhhccccCCC
Q psy15216 1099 ADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKNGAIFNENSGI 1143 (2602)
Q Consensus 1099 ~~g~l~v~a~~~~~g~~~~~~~~~~~~l~~~~i~~~~~~~~~~g~ 1143 (2602)
.||+|+|++.++.||++.+++|+.+++||++||++++ ++++-+
T Consensus 480 ~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~~i~~~~--~~~~~~ 522 (605)
T 2kho_A 480 ADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMV--RDAEAN 522 (605)
T ss_dssp TTSCEEEEEEETTTCCEEEEEECTTSSCCHHHHHHHH--HHHHHS
T ss_pred CCCceeEEEEEcCCCceeecccccccCCCHHHHHHHH--HHHHHH
Confidence 9999999999999999999999999889999999987 554444
No 3
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=9.7e-77 Score=795.97 Aligned_cols=521 Identities=37% Similarity=0.587 Sum_probs=472.0
Q ss_pred eEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCCCCCCCC-
Q psy15216 638 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNIN- 716 (2602)
Q Consensus 638 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~- 716 (2602)
.+||||||||||+||++.+|.+++++|+.|++++||+|+|.++ +++||..|+++...+|.++++++||+||+++++..
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 83 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSS-CEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHH
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCC-cEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHH
Confidence 4799999999999999999999999999999999999999765 68999999999999999999999999999987743
Q ss_pred ---CCCCCeeeecCCCceEEEEe----CceeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHHHHHHHHHHH
Q psy15216 717 ---TNSFPYDFQNKFGMLHIKTI----SGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAK 789 (2602)
Q Consensus 717 ---~~~~~~~~~~~~~~~~~~~~----~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~~~~Aa~ 789 (2602)
...+||.+...+|.+.+... .+.++|+++++++|++|++.|+.++|.++.++|||||++|++.||++|++|++
T Consensus 84 ~~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~ 163 (554)
T 1yuw_A 84 QSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGT 163 (554)
T ss_dssp HHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 23689998866777666542 35799999999999999999999999999999999999999999999999999
Q ss_pred HcCCceEEEechhHHHHHHhhhccCc-ccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCcchHHHHHHHHHHHH
Q psy15216 790 LAGLNVLRLLNEPTSAAIAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 868 (2602)
Q Consensus 790 ~AGl~~~~li~EPtAAAl~y~~~~~~-~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~ 868 (2602)
.||++++++++||+|||++|++.... .++.++|||+||||||+|++++.++.++|+++.|+.++||++||++|++|+.+
T Consensus 164 ~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~ 243 (554)
T 1yuw_A 164 IAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243 (554)
T ss_dssp TTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred HcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999987642 45789999999999999999999999999999999999999999999999999
Q ss_pred HHhhcc-----CCHHHHHHHHHHHHHHHHHcccccceEEEEE-ecCCceEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 869 NAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMD 942 (2602)
Q Consensus 869 ~~~~~~-----~~~~~~~~l~~~~e~~K~~LS~~~~~~~~i~-~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~ 942 (2602)
+|..+. .+++.+.+|+.+||++|+.||...++.+.++ +.+|.++..+|||++|+++++|+++++..+++++|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~ 323 (554)
T 1yuw_A 244 EFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRD 323 (554)
T ss_dssp HHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 886543 4678899999999999999999988888877 4677889999999999999999999999999999999
Q ss_pred cCCCccccceEEEecCccchHHHHHHHHhhcc-CcccCcCCcchHhHHHHHHHhHHhcCCC-CCCCceeeeccccccceE
Q psy15216 943 ANLTIKDINNVILVGGSTRMKHIHEGVSNFFK-TTLLTSIDPDKAVVFGAAIQANFLSGNR-GIDDNFLLLDVIPLSLGI 1020 (2602)
Q Consensus 943 a~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~-~~~~~~~~p~~aVa~GAa~~a~~l~~~~-~~~~~~~~~dv~~~~~gi 1020 (2602)
+++.+.+|+.|+||||+||+|+|+++|++.|+ .++..+.||++|||+|||++|+.+++.. ...+++.+.|++|++||+
T Consensus 324 a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slgi 403 (554)
T 1yuw_A 324 AKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGI 403 (554)
T ss_dssp TTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEEE
T ss_pred cCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEEEE
Confidence 99999999999999999999999999999995 7888899999999999999999998742 113568899999999999
Q ss_pred eeeccEEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCCCCCccEEEEEEEECCC
Q psy15216 1021 ETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVDAD 1100 (2602)
Q Consensus 1021 ~~~~~~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~~d~~ 1100 (2602)
++.++.|.++|+||++||+++++.|++..|+|+.+.|.|||||+..+.+|..||+|.|+++||.|+|.++|+|+|++|.|
T Consensus 404 ~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~ 483 (554)
T 1yuw_A 404 ETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDAN 483 (554)
T ss_dssp EETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTT
T ss_pred EecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEecCCceEEEEEecCC-CCCHHHHHhhhhccccCCCchhHHHHhcccchhhhcc
Q psy15216 1101 GLLSIFAYEKISGKKKFITIKPFY-NMNLDEIKNGAIFNENSGISLCDALLKNSIFIEHACE 1161 (2602)
Q Consensus 1101 g~l~v~a~~~~~g~~~~~~~~~~~-~l~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~c~ 1161 (2602)
|+|+|++.++.||++.+++|..+. +||++||++++ ++++-+..-+..........+.++
T Consensus 484 gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~--~~~~~~~~~d~~~~~~~~~~n~~e 543 (554)
T 1yuw_A 484 GILNVSAVDKSTGKENKITITNDKGRLSKEDIERMV--QEAEKYKAEDEKQRDKVSSKNSLE 543 (554)
T ss_dssp CCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHH--HHHHHTTTHHHHHTTSSCSCEECS
T ss_pred ceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHH--HHHHHhhhccHHHHHHHHHHHHHH
Confidence 999999999999999999999884 59999999986 655555555555444444333333
No 4
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=2.2e-76 Score=799.44 Aligned_cols=494 Identities=42% Similarity=0.636 Sum_probs=462.3
Q ss_pred ceEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCCcEEecHHHHhhhccCCCCchhhhhhhcCCCCCCCC
Q psy15216 2033 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNIN 2112 (2602)
Q Consensus 2033 ~~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~ 2112 (2602)
..+||||||||||+||++.+|+|+++.|..|++++||+|+|.++++++||..|+.+...+|.++++++||+||+++.++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 35899999999999999999999999999999999999999888899999999999999999999999999999987742
Q ss_pred ----CCCCCeeee-cCCCceEEEecCceeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHHHHHHHHHHHHc
Q psy15216 2113 ----TNSFPYDFQ-NKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLA 2187 (2602)
Q Consensus 2113 ----~~~~~~~~~-~~~g~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~~Aa~~A 2187 (2602)
.+.+||++. ..+|...+...+..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++|++.|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~A 161 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIA 161 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred HHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHc
Confidence 357888875 466777777788899999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEeechhHHHHHHhhhccCCCCceEEEEEeCCceEEEEEEEEeC----CEEEEEEEecCCCCchhHHHHHHHHHHH
Q psy15216 2188 GLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKN----GVFKVLSVGGDSNLGGDDFDYCLFSWIV 2263 (2602)
Q Consensus 2188 Gl~~~~li~EP~AAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~----~~~~v~~~~g~~~lGG~~~D~~l~~~l~ 2263 (2602)
||+++++|+||+|||++|++.....++.++|||+||||||+|++++.+ +.++++++.|+.++||.+||++|++|+.
T Consensus 162 Gl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~ 241 (605)
T 4b9q_A 162 GLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (605)
T ss_dssp TCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred CCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHH
Confidence 999999999999999999988766678999999999999999999988 8999999999999999999999999999
Q ss_pred HHHhhhcC------ChhHHHHHHHHHHHHHHHhcccceEEEEEEe-----cCCceEEEEcCHHHHHHHHHHHHHHHHHHH
Q psy15216 2264 KNAFLKKL------SYKDVNILMIKSREIKELLSYQSSVKLNVKL-----SDKKIVNITIDMKQFFTITQHLVNRTILLS 2332 (2602)
Q Consensus 2264 ~~~~~~~~------~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~-----~~~~~~~~~itr~~fe~l~~~~~~~~~~~i 2332 (2602)
+++ .++. ....+.+|+.+||++|+.||...++.+.++. .++.++.++|||++|+++++|+++++..++
T Consensus 242 ~~f-~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v 320 (605)
T 4b9q_A 242 EEF-KKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPL 320 (605)
T ss_dssp HHH-HHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHH
T ss_pred HHH-hhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 874 3322 3456788999999999999999988888773 234678999999999999999999999999
Q ss_pred HHHHHHcCCCccccceEEEEeCccchHHHHHHHHhhcCCcccCCCCccchhhhHHHHHhHHhcCCCCCCCceeeeccccc
Q psy15216 2333 SKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPL 2412 (2602)
Q Consensus 2333 ~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~~~~~~~~~~~~~~~d~~~~ 2412 (2602)
+++|+++++...+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++.. +++.+.|++|+
T Consensus 321 ~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~---~~~~l~dv~p~ 397 (605)
T 4b9q_A 321 KVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDV---KDVLLLDVTPL 397 (605)
T ss_dssp HHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTSS---CSEEEECBCSS
T ss_pred HHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCCC---CceEEEeeeee
Confidence 999999999999999999999999999999999999999999999999999999999999998763 45899999999
Q ss_pred cceEEeeccEEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCCCCCccEEEEEEE
Q psy15216 2413 SLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQ 2492 (2602)
Q Consensus 2413 ~~gi~~~~~~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~ 2492 (2602)
+||+++.+|.|.+||+||++||+++++.|++..|||+.+.|.|||||+..+.+|..||+|.|+++||.|+|.++|+|+|+
T Consensus 398 slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~ 477 (605)
T 4b9q_A 398 SLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFD 477 (605)
T ss_dssp CEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEE
T ss_pred EEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCccEEEEEEeecCCcEEEEEEecCCCCChHHHhcc
Q psy15216 2493 VDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKNG 2530 (2602)
Q Consensus 2493 id~~g~l~V~a~~~~tg~~~~~~i~~~~~l~~~ei~~~ 2530 (2602)
+|.||+|+|+|.++.||++.+++|...++||++||++.
T Consensus 478 id~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~ei~~~ 515 (605)
T 4b9q_A 478 IDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKM 515 (605)
T ss_dssp ECTTSCEEEEEEETTTCCEECCEEESCCSCCHHHHHHH
T ss_pred EcCCcEEEEEEEecCCCcEEEEEecCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999963
No 5
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.5e-75 Score=794.01 Aligned_cols=499 Identities=23% Similarity=0.337 Sum_probs=452.8
Q ss_pred EEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCCCCCCCCC-
Q psy15216 639 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNINT- 717 (2602)
Q Consensus 639 vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~~- 717 (2602)
+||||||||||+||++.+|++++|.|..|++.+||+|+|.++ +++||..|+.+...+|.++++++||+||++++++..
T Consensus 4 ~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 82 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPK-NRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFE 82 (675)
T ss_dssp CEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSS-SEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHH
T ss_pred EEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCC-cEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHH
Confidence 799999999999999999999999999999999999999765 689999999999999999999999999999877532
Q ss_pred ---CCCCeeee-cCCCceEEEEe--C--ceeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHHHHHHHHHHH
Q psy15216 718 ---NSFPYDFQ-NKFGMLHIKTI--S--GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAK 789 (2602)
Q Consensus 718 ---~~~~~~~~-~~~~~~~~~~~--~--~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~~~~Aa~ 789 (2602)
..+||.+. ..+|.+.+... + +.++|+++++++|++|++.|+.++|.++.++|||||+||++.||++|++|++
T Consensus 83 ~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~ 162 (675)
T 3d2f_A 83 QESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAAR 162 (675)
T ss_dssp HHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 37899887 34677766543 2 5799999999999999999999999999999999999999999999999999
Q ss_pred HcCCceEEEechhHHHHHHhhhccC------cccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCcchHHHHHHH
Q psy15216 790 LAGLNVLRLLNEPTSAAIAYKLDKN------IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLF 863 (2602)
Q Consensus 790 ~AGl~~~~li~EPtAAAl~y~~~~~------~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~ 863 (2602)
.|||+++++|+||+|||++|++.+. ..+.++||||+||||||+|++++.++.++|+++.|+.++||++||++|+
T Consensus 163 ~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~ 242 (675)
T 3d2f_A 163 IAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAIT 242 (675)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHH
Confidence 9999999999999999999988653 2457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcc-----CCHHHHHHHHHHHHHHHHHcccccceEEEEE-ecCCceEEEEeCHHHHHHHHHHHHHHHHHHHH
Q psy15216 864 SWIVKNAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILLSS 937 (2602)
Q Consensus 864 ~~l~~~~~~~~-----~~~~~~~~l~~~~e~~K~~LS~~~~~~~~i~-~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~ 937 (2602)
+|+.++|..+. .+++.+.+|+.+||++|+.||...++.+.++ +.++.++.++|||++|+++++|+++++..+++
T Consensus 243 ~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~ 322 (675)
T 3d2f_A 243 EHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVT 322 (675)
T ss_dssp HHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 99999886543 4688999999999999999999888888876 45678899999999999999999999999999
Q ss_pred HHHHHcCCCccccceEEEecCccchHHHHHHHHhhccCcccCcCCcchHhHHHHHHHhHHhcCCCCCCCceeeecccccc
Q psy15216 938 KALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLS 1017 (2602)
Q Consensus 938 ~~l~~a~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~dv~~~~ 1017 (2602)
++|+++++++.+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++.++ ..++.+.|++|++
T Consensus 323 ~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~-v~~~~l~Dv~p~s 401 (675)
T 3d2f_A 323 KALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLR-VRPFKFEDIHPYS 401 (675)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCC-CCCCEEEEEECSC
T ss_pred HHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCc-ccceEEEeeeecc
Confidence 999999999999999999999999999999999999999989999999999999999999998765 3568899999999
Q ss_pred ceEeeecc----EEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccc-cCceeeeeEecCCCCCCCCcc-EE
Q psy15216 1018 LGIETIGG----LVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVK-NCQVLANFELRDIPPMPAGRA-RI 1091 (2602)
Q Consensus 1018 ~gi~~~~~----~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~-~~~~lg~~~l~~i~~~~~g~~-~i 1091 (2602)
||+++.++ .+.+||+||++||++++++|++..++| +.+. |+|++..+. +|..||+|.|+||||.|+|.+ +|
T Consensus 402 lgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~--~~~~-~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i 478 (675)
T 3d2f_A 402 VSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS--MAAS-YTDITQLPPNTPEQIANWEITGVQLPEGQDSVPV 478 (675)
T ss_dssp EEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE--EEEE-ESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEE
T ss_pred eEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce--EEEE-EcCCcccccccCceeeEEEecCcCCCCCCCcceE
Confidence 99999877 499999999999999999999876664 3333 789999887 999999999999999999985 89
Q ss_pred EEEEEECCCeeEEEEEE----------EecCCceEEEEEecCC-CCCHHHHHhhhhccccCCCc
Q psy15216 1092 KVTYQVDADGLLSIFAY----------EKISGKKKFITIKPFY-NMNLDEIKNGAIFNENSGIS 1144 (2602)
Q Consensus 1092 ~v~f~~d~~g~l~v~a~----------~~~~g~~~~~~~~~~~-~l~~~~i~~~~~~~~~~g~~ 1144 (2602)
+|+|++|.||+|+|++. ++.||++.+++|+... +||++||++++ ++++-+.
T Consensus 479 ~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~--~~~~~~~ 540 (675)
T 3d2f_A 479 KLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELI--EKENEML 540 (675)
T ss_dssp EEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHH--HHHHHHH
T ss_pred EEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHH--HHHHHHH
Confidence 99999999999999995 7899999999999875 79999999987 5544433
No 6
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=3.4e-74 Score=778.12 Aligned_cols=493 Identities=42% Similarity=0.642 Sum_probs=454.6
Q ss_pred eEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCCcEEecHHHHhhhccCCCCchhhhhhhcCCCCCCCCC
Q psy15216 2034 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNINT 2113 (2602)
Q Consensus 2034 ~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~~ 2113 (2602)
.+||||||||||+||++.+|.+++++|++|++++||+|+|.++++++||+.|+.+...+|.++++++||+||+.+.+...
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 37999999999999999999999999999999999999998888899999999999999999999999999998765432
Q ss_pred ----CCCCeeee-cCCCceEEEecCceeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHHHHHHHHHHHHcC
Q psy15216 2114 ----NSFPYDFQ-NKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAG 2188 (2602)
Q Consensus 2114 ----~~~~~~~~-~~~g~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~~Aa~~AG 2188 (2602)
+.+||++. ..+|...+...+..++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++.||
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~AG 162 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAG 162 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTTT
T ss_pred HHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 24678764 5667777777777899999999999999999999999999999999999999999999999999999
Q ss_pred CceeEeechhHHHHHHhhhccCCCCceEEEEEeCCceEEEEEEEEe----CCEEEEEEEecCCCCchhHHHHHHHHHHHH
Q psy15216 2189 LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFK----NGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 2264 (2602)
Q Consensus 2189 l~~~~li~EP~AAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~----~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~ 2264 (2602)
++++++|+||+|||++|++.....++.+||||+||||||+|++++. ++.++|+++.|+.++||.+||++|++|+.+
T Consensus 163 l~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 2kho_A 163 LEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp CEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHH
T ss_pred CceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999998765456789999999999999999998 789999999999999999999999999998
Q ss_pred HHhhhcC------ChhHHHHHHHHHHHHHHHhcccceEEEEEEe-cC---C-ceEEEEcCHHHHHHHHHHHHHHHHHHHH
Q psy15216 2265 NAFLKKL------SYKDVNILMIKSREIKELLSYQSSVKLNVKL-SD---K-KIVNITIDMKQFFTITQHLVNRTILLSS 2333 (2602)
Q Consensus 2265 ~~~~~~~------~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~-~~---~-~~~~~~itr~~fe~l~~~~~~~~~~~i~ 2333 (2602)
++ .+++ ....+.+|+.+||++|+.||...++.+.++. .+ | .++.++|||++|+++++|+++++..+++
T Consensus 243 ~~-~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~ 321 (605)
T 2kho_A 243 EF-KKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLK 321 (605)
T ss_dssp HH-HHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHH
T ss_pred HH-HHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 74 3321 2356788999999999999999888888773 22 2 5677899999999999999999999999
Q ss_pred HHHHHcCCCccccceEEEEeCccchHHHHHHHHhhcCCcccCCCCccchhhhHHHHHhHHhcCCCCCCCceeeecccccc
Q psy15216 2334 KALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLS 2413 (2602)
Q Consensus 2334 ~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~~~~~~~~~~~~~~~d~~~~~ 2413 (2602)
++|+++++.+.+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++.. .++.+.|++|++
T Consensus 322 ~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~~---~~~~l~dv~p~s 398 (605)
T 2kho_A 322 VALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDV---KDVLLLDVTPLS 398 (605)
T ss_dssp HHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTSC---CCCCCSBCCCCC
T ss_pred HHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCCc---cCceEEeeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999988752 358899999999
Q ss_pred ceEEeeccEEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCCCCCccEEEEEEEE
Q psy15216 2414 LGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQV 2493 (2602)
Q Consensus 2414 ~gi~~~~~~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~i 2493 (2602)
||+++.+|.|.++|+||++||+++++.|++..|+|+.+.|.||||++..+.+|..||+|.|+++||.|+|.++|+|+|++
T Consensus 399 lgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~i 478 (605)
T 2kho_A 399 LGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDI 478 (605)
T ss_dssp EEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEE
T ss_pred ccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccEEEEEEeecCCcEEEEEEecCCCCChHHHhcc
Q psy15216 2494 DADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKNG 2530 (2602)
Q Consensus 2494 d~~g~l~V~a~~~~tg~~~~~~i~~~~~l~~~ei~~~ 2530 (2602)
|.||+|+|++.++.||++.+++|+..++||++||++.
T Consensus 479 d~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~~i~~~ 515 (605)
T 2kho_A 479 DADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKM 515 (605)
T ss_dssp CTTSCEEEEEEETTTCCEEEEEECTTSSCCHHHHHHH
T ss_pred cCCCceeEEEEEcCCCceeecccccccCCCHHHHHHH
Confidence 9999999999999999999999999999999999964
No 7
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=5.9e-73 Score=754.88 Aligned_cols=479 Identities=41% Similarity=0.609 Sum_probs=443.9
Q ss_pred eEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCCCCCCCCC
Q psy15216 638 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNINT 717 (2602)
Q Consensus 638 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~~ 717 (2602)
.+||||||||||+||++.+|.|++++|+.|++++||+|+| .+++++||+.|+.+...+| ++++++||+||+++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~-~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~----- 75 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAKRQAITNP-NTIISIKRHMGTDY----- 75 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEE-SSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEE-CCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCc-----
Confidence 4799999999999999999999999999999999999999 5667999999999999999 99999999999843
Q ss_pred CCCCeeeecCCCceEEEEeCceeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHHHHHHHHHHHHcCCceEE
Q psy15216 718 NSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLR 797 (2602)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~~~~Aa~~AGl~~~~ 797 (2602)
.+ ...+..++|+++++++|++|++.++++++.++.++|||||++|++.||++|++|++.||+++++
T Consensus 76 -----~~---------~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~AGl~~~~ 141 (509)
T 2v7y_A 76 -----KV---------EIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVER 141 (509)
T ss_dssp -----CE---------EETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred -----EE---------EECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 21 1234468999999999999999999999999999999999999999999999999999999999
Q ss_pred EechhHHHHHHhhhccCcccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCcchHHHHHHHHHHHHHHhhcc---
Q psy15216 798 LLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKK--- 874 (2602)
Q Consensus 798 li~EPtAAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~--- 874 (2602)
+++||+|||++|++... .+..+||||+||||||+|++++.++.++++++.|+.++||.+||+.|++|+.++|..+.
T Consensus 142 li~Ep~AAAlay~~~~~-~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~ 220 (509)
T 2v7y_A 142 IINEPTAAALAYGLDKE-EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGID 220 (509)
T ss_dssp EEEHHHHHHHHTTGGGS-CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred EecCHHHHHHHHhhccC-CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999998764 56799999999999999999999999999999999999999999999999999886543
Q ss_pred --CCHHHHHHHHHHHHHHHHHcccccceEEEEEe-cC---C-ceEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q psy15216 875 --LSYKDVNILMIKSREIKELLSYQSSVKLNVKL-SD---K-KIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTI 947 (2602)
Q Consensus 875 --~~~~~~~~l~~~~e~~K~~LS~~~~~~~~i~~-~~---~-~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~a~~~~ 947 (2602)
.+++.+.+|+.+||++|+.||...+..+.++. .+ | .++.++|||++|+++++|+++++.++++++|+++++.+
T Consensus 221 ~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~ 300 (509)
T 2v7y_A 221 LSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTP 300 (509)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCCG
T ss_pred cccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh
Confidence 45788999999999999999998888888773 22 2 46788999999999999999999999999999999999
Q ss_pred cccceEEEecCccchHHHHHHHHhhccCcccCcCCcchHhHHHHHHHhHHhcCCCCCCCceeeeccccccceEeeeccEE
Q psy15216 948 KDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLSLGIETIGGLV 1027 (2602)
Q Consensus 948 ~~i~~V~LvGG~sr~P~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~dv~~~~~gi~~~~~~~ 1027 (2602)
.+|+.|+||||+|++|+|+++|++.|+.++..+.||++|||+|||++|+.+++.. +++.+.|++|++||+++.++.|
T Consensus 301 ~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~~---~~~~~~dv~p~slgi~~~~~~~ 377 (509)
T 2v7y_A 301 ADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEV---KDVVLLDVTPLSLGIETMGGVF 377 (509)
T ss_dssp GGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTCC---CCCCCCCBCSSEEEEEETTTEE
T ss_pred hHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCCc---cCceEEEeeccccceeecCCce
Confidence 9999999999999999999999999998889999999999999999999998762 3688999999999999999999
Q ss_pred EEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCCCCCccEEEEEEEECCCeeEEEEE
Q psy15216 1028 EKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFA 1107 (2602)
Q Consensus 1028 ~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~~d~~g~l~v~a 1107 (2602)
.++|+||++||+++++.|++..|+|+.+.|.|||||+..+.+|..||+|.|+++||.|+|.++|+|+|++|.||+|+|++
T Consensus 378 ~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a 457 (509)
T 2v7y_A 378 TKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRA 457 (509)
T ss_dssp EEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEEEE
T ss_pred EEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCceEEEEEecCCCCCHHHHHhhhhccccCCC
Q psy15216 1108 YEKISGKKKFITIKPFYNMNLDEIKNGAIFNENSGI 1143 (2602)
Q Consensus 1108 ~~~~~g~~~~~~~~~~~~l~~~~i~~~~~~~~~~g~ 1143 (2602)
+++.||++.+++|+.+.+||++||++++ ++++-+
T Consensus 458 ~~~~~g~~~~~~i~~~~~l~~~~i~~~~--~~~~~~ 491 (509)
T 2v7y_A 458 KDLGTNKEQSITIKSSSGLSEEEIQRMI--KEAEEN 491 (509)
T ss_dssp EETTTCCEEEEEECSSCSCCSHHHHHHH--HHHHHS
T ss_pred EEcCCCcEEEEEEEecCCCCHHHHHHHH--HHHHHh
Confidence 9999999999999999889999999986 444443
No 8
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=6.1e-73 Score=759.19 Aligned_cols=494 Identities=39% Similarity=0.627 Sum_probs=452.3
Q ss_pred eEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCCcEEecHHHHhhhccCCCCchhhhhhhcCCCCCCCC-
Q psy15216 2034 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNIN- 2112 (2602)
Q Consensus 2034 ~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~- 2112 (2602)
.+||||||||||+||++.+|.++++.|++|++++||+|+|.+ ++++||..|+.+...+|.++++++||+||+++.++.
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~-~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 83 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECS-SCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHH
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcC-CcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHH
Confidence 479999999999999999999999999999999999999975 478999999999999999999999999999887643
Q ss_pred ---CCCCCeeeecCCCceEEEe----cCceeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHHHHHHHHHHH
Q psy15216 2113 ---TNSFPYDFQNKFGMLHIKT----ISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAK 2185 (2602)
Q Consensus 2113 ---~~~~~~~~~~~~g~~~~~~----~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~~Aa~ 2185 (2602)
.+.+||.+...+|...+.. ....++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++
T Consensus 84 ~~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~ 163 (554)
T 1yuw_A 84 QSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGT 163 (554)
T ss_dssp HHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 3568888875566655443 235799999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeEeechhHHHHHHhhhccCC-CCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCchhHHHHHHHHHHHH
Q psy15216 2186 LAGLNVLRLLNEPTSAAIAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 2264 (2602)
Q Consensus 2186 ~AGl~~~~li~EP~AAAl~y~~~~~~-~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~ 2264 (2602)
.||++++++++||+|||++|++.... .++.++|||+||||||+|++++.++.++++++.|+.++||.+||++|++|+.+
T Consensus 164 ~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~ 243 (554)
T 1yuw_A 164 IAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243 (554)
T ss_dssp TTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred HcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999886542 45789999999999999999999999999999999999999999999999998
Q ss_pred HHhhhcC------ChhHHHHHHHHHHHHHHHhcccceEEEEEE-ecCCceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 2265 NAFLKKL------SYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALM 2337 (2602)
Q Consensus 2265 ~~~~~~~------~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~-~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~ 2337 (2602)
+ |.+++ ....+.+|+.+||++|+.||...++.+.++ +.++.++..+|||++|+++++|+++++.++++++|+
T Consensus 244 ~-~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~ 322 (554)
T 1yuw_A 244 E-FKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALR 322 (554)
T ss_dssp H-HHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHH
T ss_pred H-HHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 33322 235677899999999999999988888876 456778899999999999999999999999999999
Q ss_pred HcCCCccccceEEEEeCccchHHHHHHHHhhcC-CcccCCCCccchhhhHHHHHhHHhcCC--CCCCCceeeeccccccc
Q psy15216 2338 DANLTIKDINNVILVGGSTRMKHIHEGVSNFFK-TTLLTSIDPDKAVVFGAAIQANFLSGN--RGIDDNFLLLDVIPLSL 2414 (2602)
Q Consensus 2338 ~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~-~~~~~~~~p~~aVa~GAa~~a~~~~~~--~~~~~~~~~~d~~~~~~ 2414 (2602)
++++.+.+|+.|+||||+|++|+|+++|++.|+ .++..+.||++|||+|||++|+.+++. ... +++.+.|++|++|
T Consensus 323 ~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~-~~~~~~dv~p~sl 401 (554)
T 1yuw_A 323 DAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENV-QDLLLLDVTPLSL 401 (554)
T ss_dssp HTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCT-TSSCCCCBCSSCE
T ss_pred HcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccc-cceEEEEeeeeEE
Confidence 999999999999999999999999999999996 788889999999999999999999874 222 4588999999999
Q ss_pred eEEeeccEEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCCCCCccEEEEEEEEc
Q psy15216 2415 GIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVD 2494 (2602)
Q Consensus 2415 gi~~~~~~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~id 2494 (2602)
|+++.+|.|.++|+||++||+++++.|++..|+|+.+.|.||||++..+.+|..||+|.|+++||.|+|.++|+|+|++|
T Consensus 402 gi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 481 (554)
T 1yuw_A 402 GIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDID 481 (554)
T ss_dssp EEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEEC
T ss_pred EEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEEeecCCcEEEEEEecC-CCCChHHHhcc
Q psy15216 2495 ADGLLSIFAYEKISGKKKFITIKPF-YNMNLDEIKNG 2530 (2602)
Q Consensus 2495 ~~g~l~V~a~~~~tg~~~~~~i~~~-~~l~~~ei~~~ 2530 (2602)
.||+|+|++.++.||++.+++|... ++||++||++.
T Consensus 482 ~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~ 518 (554)
T 1yuw_A 482 ANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERM 518 (554)
T ss_dssp TTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHH
T ss_pred cCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHH
Confidence 9999999999999999999999987 67999999963
No 9
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.3e-71 Score=755.59 Aligned_cols=491 Identities=23% Similarity=0.365 Sum_probs=441.8
Q ss_pred eEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCCcEEecHHHHhhhccCCCCchhhhhhhcCCCCCCCC-
Q psy15216 2034 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNIN- 2112 (2602)
Q Consensus 2034 ~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~- 2112 (2602)
.+||||||||||+||++.+|+++++.|+.|++.+||+|+|.+ ++++||+.|+.+...+|.++++++||+||+++.++.
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~-~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 81 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGP-KNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF 81 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECS-SSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred cEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECC-CcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence 379999999999999999999999999999999999999975 568999999999999999999999999999987753
Q ss_pred ---CCCCCeeeec-CCCceEEEec--C--ceeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHHHHHHHHHH
Q psy15216 2113 ---TNSFPYDFQN-KFGMLHIKTI--S--GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAA 2184 (2602)
Q Consensus 2113 ---~~~~~~~~~~-~~g~~~~~~~--~--~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~~Aa 2184 (2602)
.+.+||.+.. .+|.+.+... + ..++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|+
T Consensus 82 ~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa 161 (675)
T 3d2f_A 82 EQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 161 (675)
T ss_dssp HHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 3578888754 4566655432 2 479999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeEeechhHHHHHHhhhccC------CCCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCchhHHHHHH
Q psy15216 2185 KLAGLNVLRLLNEPTSAAIAYKLDKN------IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCL 2258 (2602)
Q Consensus 2185 ~~AGl~~~~li~EP~AAAl~y~~~~~------~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l 2258 (2602)
+.||++++++|+||+|||++|++... ..++++||||+||||||+|++++.++.++|+++.|+.++||++||++|
T Consensus 162 ~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 162 RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 99999999999999999999988652 345689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcC------ChhHHHHHHHHHHHHHHHhcccceEEEEEE-ecCCceEEEEcCHHHHHHHHHHHHHHHHHH
Q psy15216 2259 FSWIVKNAFLKKL------SYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILL 2331 (2602)
Q Consensus 2259 ~~~l~~~~~~~~~------~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~-~~~~~~~~~~itr~~fe~l~~~~~~~~~~~ 2331 (2602)
++|+.++ |.+++ ..+.+.+|+.+||++|+.||...++.++++ +.++.++.++|||++|+++++|+++++..+
T Consensus 242 ~~~l~~~-f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~ 320 (675)
T 3d2f_A 242 TEHFADE-FKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEP 320 (675)
T ss_dssp HHHHHHH-HHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHH
T ss_pred HHHHHHH-HHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 9999986 43332 235678899999999999999888888776 455678899999999999999999999999
Q ss_pred HHHHHHHcCCCccccceEEEEeCccchHHHHHHHHhhcCCcccCCCCccchhhhHHHHHhHHhcCCCCCCCceeeecccc
Q psy15216 2332 SSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIP 2411 (2602)
Q Consensus 2332 i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~~~~~~~~~~~~~~~d~~~ 2411 (2602)
++++|+++++.+.+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++.++++ ++.+.|++|
T Consensus 321 i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~-~~~l~Dv~p 399 (675)
T 3d2f_A 321 VTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVR-PFKFEDIHP 399 (675)
T ss_dssp HHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCC-CCEEEEEEC
T ss_pred HHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCccc-ceEEEeeee
Confidence 9999999999999999999999999999999999999999999999999999999999999999876554 488999999
Q ss_pred ccceEEeecc----EEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCccccc-CCceeEEEEeeCCCCCCCCcc-
Q psy15216 2412 LSLGIETIGG----LVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVK-NCQVLANFELRDIPPMPAGRA- 2485 (2602)
Q Consensus 2412 ~~~gi~~~~~----~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~-~~~~lg~~~l~~~~~~~~g~~- 2485 (2602)
++||+++.++ .+.+||+||++||++++..|++..++| +.+. |+|++..+. +|..||+|.|+++||.|.|.+
T Consensus 400 ~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~--~~~~-~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~ 476 (675)
T 3d2f_A 400 YSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS--MAAS-YTDITQLPPNTPEQIANWEITGVQLPEGQDSV 476 (675)
T ss_dssp SCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE--EEEE-ESCGGGSCTTCCSEEEEEEEECCCCCSSCSCE
T ss_pred cceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce--EEEE-EcCCcccccccCceeeEEEecCcCCCCCCCcc
Confidence 9999999876 499999999999999999999876654 3333 789998887 999999999999999999974
Q ss_pred EEEEEEEEcCCccEEEEEE----------eecCCcEEEEEEecC-CCCChHHHhcc
Q psy15216 2486 RIKVTYQVDADGLLSIFAY----------EKISGKKKFITIKPF-YNMNLDEIKNG 2530 (2602)
Q Consensus 2486 ~i~v~f~id~~g~l~V~a~----------~~~tg~~~~~~i~~~-~~l~~~ei~~~ 2530 (2602)
+|+|+|++|.||+|+|++. ++.||++..++|... ++||++||++.
T Consensus 477 ~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~ 532 (675)
T 3d2f_A 477 PVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNEL 532 (675)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHH
T ss_pred eEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHH
Confidence 8999999999999999995 799999999999986 58999999964
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1e-69 Score=723.73 Aligned_cols=471 Identities=42% Similarity=0.624 Sum_probs=434.9
Q ss_pred eEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCCcEEecHHHHhhhccCCCCchhhhhhhcCCCCCCCCC
Q psy15216 2034 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNINT 2113 (2602)
Q Consensus 2034 ~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~~ 2113 (2602)
.+||||||||||+||++.+|.|++++|++|++.+||+|+| .+++++||+.|+.+...+| ++++++||+||+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~-~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~---- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK---- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEE-SSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEE-CCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE----
Confidence 4899999999999999999999999999999999999999 5778999999999999999 999999999998432
Q ss_pred CCCCeeeecCCCceEEEecCceeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHHHHHHHHHHHHcCCceeE
Q psy15216 2114 NSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLR 2193 (2602)
Q Consensus 2114 ~~~~~~~~~~~g~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~~Aa~~AGl~~~~ 2193 (2602)
+ ...+..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++|++.||+++++
T Consensus 77 ------~---------~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~AGl~~~~ 141 (509)
T 2v7y_A 77 ------V---------EIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVER 141 (509)
T ss_dssp ------E---------EETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ------E---------EECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 1 1123468999999999999999999999999999999999999999999999999999999999
Q ss_pred eechhHHHHHHhhhccCCCCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCchhHHHHHHHHHHHHHHhhhcC--
Q psy15216 2194 LLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKL-- 2271 (2602)
Q Consensus 2194 li~EP~AAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~-- 2271 (2602)
+++||+|||++|++... .+++++|||+||||||+|++++.++.++++++.|+.++||.+||+.|++|+.+++ .+++
T Consensus 142 li~Ep~AAAlay~~~~~-~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~-~~~~~~ 219 (509)
T 2v7y_A 142 IINEPTAAALAYGLDKE-EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQF-KQEHGI 219 (509)
T ss_dssp EEEHHHHHHHHTTGGGS-CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHH-HHHHSC
T ss_pred EecCHHHHHHHHhhccC-CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHH-HHHhCC
Confidence 99999999999988754 4678999999999999999999999999999999999999999999999999874 3321
Q ss_pred ----ChhHHHHHHHHHHHHHHHhcccceEEEEEEe-cC---C-ceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q psy15216 2272 ----SYKDVNILMIKSREIKELLSYQSSVKLNVKL-SD---K-KIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLT 2342 (2602)
Q Consensus 2272 ----~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~-~~---~-~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~ 2342 (2602)
......+|+.+||++|+.||...+..+.++. .+ | .++.++|||++|+++++|+++++.+++.++|+++++.
T Consensus 220 ~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~ 299 (509)
T 2v7y_A 220 DLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLT 299 (509)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCC
T ss_pred CcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2345678999999999999998888888773 21 2 4577899999999999999999999999999999999
Q ss_pred ccccceEEEEeCccchHHHHHHHHhhcCCcccCCCCccchhhhHHHHHhHHhcCCCCCCCceeeeccccccceEEeeccE
Q psy15216 2343 IKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLSLGIETIGGL 2422 (2602)
Q Consensus 2343 ~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~~~~~~~~~~~~~~~d~~~~~~gi~~~~~~ 2422 (2602)
+.+|+.|+||||+|++|+|+++|++.|+.++..+.||++|||+|||++|+.+++.. +++.+.|++|++||+++.++.
T Consensus 300 ~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~~---~~~~~~dv~p~slgi~~~~~~ 376 (509)
T 2v7y_A 300 PADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEV---KDVVLLDVTPLSLGIETMGGV 376 (509)
T ss_dssp GGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTCC---CCCCCCCBCSSEEEEEETTTE
T ss_pred hhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCCc---cCceEEEeeccccceeecCCc
Confidence 99999999999999999999999999999999999999999999999999998752 357899999999999999999
Q ss_pred EEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCCCCCccEEEEEEEEcCCccEEEE
Q psy15216 2423 VEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIF 2502 (2602)
Q Consensus 2423 ~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~id~~g~l~V~ 2502 (2602)
|.++|+||++||+++++.|++..|+|+.+.|.||||++..+.+|..||+|.|+++||.|+|.++|+|+|++|.||+|+|+
T Consensus 377 ~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~ 456 (509)
T 2v7y_A 377 FTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVR 456 (509)
T ss_dssp EEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEEE
T ss_pred eEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCcEEEEEEecCCCCChHHHhcc
Q psy15216 2503 AYEKISGKKKFITIKPFYNMNLDEIKNG 2530 (2602)
Q Consensus 2503 a~~~~tg~~~~~~i~~~~~l~~~ei~~~ 2530 (2602)
++++.||++.+++|+..++||++||++.
T Consensus 457 a~~~~~g~~~~~~i~~~~~l~~~~i~~~ 484 (509)
T 2v7y_A 457 AKDLGTNKEQSITIKSSSGLSEEEIQRM 484 (509)
T ss_dssp EEETTTCCEEEEEECSSCSCCSHHHHHH
T ss_pred EEEcCCCcEEEEEEEecCCCCHHHHHHH
Confidence 9999999999999999999999999963
No 11
>1kon_A Protein YEBC, YEBC; alpha/beta, two-domains, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 2.20A {Escherichia coli} SCOP: e.39.1.1
Probab=100.00 E-value=2.6e-63 Score=562.37 Aligned_cols=228 Identities=36% Similarity=0.612 Sum_probs=205.5
Q ss_pred Hhh-cccCcccccccccccchhhHHHHHHHHHHHHHhc-CCCCCCChHHHHHHHHHHHcCCChhHHHHHHHhccCCCCCC
Q psy15216 1190 MLN-KAWGLEENSRLSFDAKRGKICTRIMRELRVAINF-GNNPDTNIKLRLAIEKALDANIPKNNIFRAIQKNNSNIKNE 1267 (2602)
Q Consensus 1190 ~l~-~~~~~~~~srl~~d~~~~~~~~~~~~~i~~a~~~-g~~p~~n~~l~~~~~~a~~~~~p~~~i~~ai~~~~~~~~~~ 1267 (2602)
|++ ++|.+++|.|.+.|++|+|+|+||+|||++|||. ||||++|||||.||++||++||||||||||||||+|+. +
T Consensus 4 MaGHsKWanIkh~K~~~Dakr~kiftKl~keI~vAak~GG~DP~~N~~Lr~aI~kAk~~nmPkd~IerAIkk~~G~~--~ 81 (249)
T 1kon_A 4 MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNNMTRDTLNRAIARGVGGD--D 81 (249)
T ss_dssp --CCCSGGGTSSSTTTTTSCHHHHHHHHHHHHHHHHHC-----CCSTTTHHHHHHHHHTTCCHHHHHHHHSCC-------
T ss_pred cccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHhCCCHHHHHHHHHhccCCC--c
Confidence 778 5999999999999999999999999999999975 57999999999999999999999999999999999974 3
Q ss_pred CcceEEEEEEEeccCCcEEEEEEecCCchhhHHHHHHhhhccCccccCCcceeEeeceeEEEEECCCCChhHHHHHHHhc
Q psy15216 1268 NINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFNKNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEK 1347 (2602)
Q Consensus 1268 ~~~~~~~~ye~~~p~g~~~~v~~~tdn~~r~~~~~r~~~~k~~g~~~~~g~v~~~f~~~g~~~~~~~~~~~~~~~~~~~~ 1347 (2602)
+.+|++++|||||||||||||||||||+|||+++||++|+|+||+||++|||+|||+|||+|.++++ ++|++||.|||+
T Consensus 82 ~~~~eei~YEgyGPgGvaiiVe~lTDN~nRt~~~vR~~f~K~GG~lg~~GsV~~~F~~kG~i~~~~~-~ed~~le~alea 160 (249)
T 1kon_A 82 DANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKG-DEDTIMEAALEA 160 (249)
T ss_dssp -CCCEEEEEEEEETTTEEEEEEEEESCHHHHHHHHHHHHHTTTCEECCTTSSGGGEEEEEEEEESSS-CHHHHHHHHHHH
T ss_pred ccCeEEEEEEEECCCceEEEEEEecCCHHHHHHHHHHHHhhcCceecCCCchhhhhheeeEEEECCC-CHHHHHHHHHhC
Confidence 6789999999999999999999999999999999999999999999999999999999999999864 899999999999
Q ss_pred CCceeeeccCceEEEEeCcccHHHHHHHHHhcCCCccccceeeeeceeeeccCCCCCCCHHHHHHHHHHHhhc
Q psy15216 1348 GAEDFLIDKDNKITIITSPSKFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDATTPIDPRVVDKMIPYLRVQ 1420 (2602)
Q Consensus 1348 g~~d~~~~~~~~~~~~~~~~~~~~v~~aL~~~g~~~~~~ei~~iP~~~v~L~~~~~~~~~~v~eal~~~l~~~ 1420 (2602)
|||||+.++|+.|+|||+|++|.+|+++|+++|+++.++++.|+|++++.|+........+++++|++..+.+
T Consensus 161 GAeDv~~~e~~~~~v~t~p~~~~~V~~aL~~~g~~~~~aei~~~P~~~v~l~~e~~~~~~klid~Led~DDVq 233 (249)
T 1kon_A 161 GAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQ 233 (249)
T ss_dssp TCSEEEECTTSCEEEEEEGGGHHHHHHHHHHTTCCCSEEEEEEEESSCCCCCTTTSHHHHHHHHHHHHSSSEE
T ss_pred CCceeeecCCceEEEEECHHHHHHHHHHHHHcCCCeeeeeeEECCCCceecCHHHHHHHHHHHHHHhcccChh
Confidence 9999964567889999999999999999999999999999999999999998877777788888888877664
No 12
>1lfp_A Hypothetical protein AQ_1575; NEW fold, thermostability, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 1.72A {Aquifex aeolicus} SCOP: e.39.1.1
Probab=100.00 E-value=4.3e-63 Score=560.61 Aligned_cols=228 Identities=35% Similarity=0.553 Sum_probs=207.8
Q ss_pred Hhh-cccCcccccccccccchhhHHHHHHHHHHHHHh-cCCCCCCChHHHHHHHHHHHcCCChhHHHHHHHhccCCCCCC
Q psy15216 1190 MLN-KAWGLEENSRLSFDAKRGKICTRIMRELRVAIN-FGNNPDTNIKLRLAIEKALDANIPKNNIFRAIQKNNSNIKNE 1267 (2602)
Q Consensus 1190 ~l~-~~~~~~~~srl~~d~~~~~~~~~~~~~i~~a~~-~g~~p~~n~~l~~~~~~a~~~~~p~~~i~~ai~~~~~~~~~~ 1267 (2602)
|++ ++|.+++|.|.+.|++|+|+|+||+|||++||| |||||++|||||.||++||++||||||||||||||+|+. +
T Consensus 1 MaGHsKWanIkh~K~~~Dakr~kiftKl~reI~vAak~GG~DP~~N~~Lr~aI~kAk~~nmPkd~IerAIkk~~G~~--~ 78 (249)
T 1lfp_A 1 MAGHSHWAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKGAGEL--E 78 (249)
T ss_dssp ----CCSCCSSSSSSCTTTSHHHHHHHHHHHHHHHHHHHCSCGGGCHHHHHHHHHHHHTTCCHHHHHHHHHHHHSCS--S
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHhCCCHHHHHHHHHHhcCCC--c
Confidence 678 599999999999999999999999999999996 568999999999999999999999999999999999974 3
Q ss_pred CcceEEEEEEEeccCCcEEEEEEecCCchhhHHHHHHhhhccCccccCCcceeEeeceeEEEEECC-CCChhHHHHHHHh
Q psy15216 1268 NINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFNKNGGNLSKEGSVLFMFKHCGQLLFLP-NTKKNTLLDLALE 1346 (2602)
Q Consensus 1268 ~~~~~~~~ye~~~p~g~~~~v~~~tdn~~r~~~~~r~~~~k~~g~~~~~g~v~~~f~~~g~~~~~~-~~~~~~~~~~~~~ 1346 (2602)
+.+|++++|||||||||||||||||||+|||+++||++|+|+||+||++|||+|||+|||+|.+++ ..++|++||.|||
T Consensus 79 ~~~~eei~YEgyGPgGvaiiVe~lTDN~nRt~~~vR~~f~K~GG~lg~~GsV~~mF~~kG~i~~~~~~~~ed~~le~ale 158 (249)
T 1lfp_A 79 GEQFEEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAKEVSEEELLEKAIE 158 (249)
T ss_dssp SCCCEEEEEEEEETTTEEEEEEEEESCHHHHHHHHHHHHHHTTCEECCTTSSGGGEEEEEEEEEEGGGSCHHHHHHHHHH
T ss_pred ccceEEEEEEEECCCceEEEEEEecCCHHHHHHHHHHHHhhcCceecCCCchhhhhheeeEEEEcCCCCCHHHHHHHHHh
Confidence 678999999999999999999999999999999999999999999999999999999999999986 4799999999999
Q ss_pred cCCceeeeccCceEEEEeCcccHHHHHHHHHhcCCCccccceeeeeceeeec-cCCCCCCCHHHHHHHHHHHhhc
Q psy15216 1347 KGAEDFLIDKDNKITIITSPSKFIEIKNSLEMTGFKAESSGIVMRPYTNIVF-KDATTPIDPRVVDKMIPYLRVQ 1420 (2602)
Q Consensus 1347 ~g~~d~~~~~~~~~~~~~~~~~~~~v~~aL~~~g~~~~~~ei~~iP~~~v~L-~~~~~~~~~~v~eal~~~l~~~ 1420 (2602)
+|||||+ ++|+.|+|||+|++|.+|+++|+++|+++.++++.|+|++++.| +........+++++|++..+.+
T Consensus 159 aGAeDv~-~e~~~~~v~t~p~~~~~V~~aL~~~g~~~~~aei~~~P~~~v~l~~~e~~~~~~klid~Led~DDVq 232 (249)
T 1lfp_A 159 VGAEDVQ-PGEEVHIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQINDEETAQKVIKLLNALEELDDVQ 232 (249)
T ss_dssp HTCSEEE-CCSSEEEEEECGGGHHHHHHHHHTTTCCCSEEEEEEEESSCEECCCHHHHHHHHHHHHHHHTSTTEE
T ss_pred cCCceee-cCCceEEEEECHHHHHHHHHHHHHcCCCeeeeeeEECCCCceecCCHHHHHHHHHHHHHHhcccChh
Confidence 9999995 56788999999999999999999999999999999999999988 6555555566666666655543
No 13
>4f3q_A Transcriptional regulatory protein CBU_1566; YEBC family; 2.15A {Coxiella burnetii}
Probab=100.00 E-value=1.9e-63 Score=564.19 Aligned_cols=229 Identities=34% Similarity=0.608 Sum_probs=204.6
Q ss_pred HHhhc-ccCcccccccccccchhhHHHHHHHHHHHHHh-cCCCCCCChHHHHHHHHHHHcCCChhHHHHHHHhccCCCCC
Q psy15216 1189 DMLNK-AWGLEENSRLSFDAKRGKICTRIMRELRVAIN-FGNNPDTNIKLRLAIEKALDANIPKNNIFRAIQKNNSNIKN 1266 (2602)
Q Consensus 1189 ~~l~~-~~~~~~~srl~~d~~~~~~~~~~~~~i~~a~~-~g~~p~~n~~l~~~~~~a~~~~~p~~~i~~ai~~~~~~~~~ 1266 (2602)
-|.++ +|.+++|.|.+.|++|+|+|+||+|||++||| |||||++|||||.||++||++||||||||||||||+|+.
T Consensus 3 ~maGHsKWanIkh~K~~~Dakr~kiftKl~reI~vAak~GG~DP~~N~~Lr~aI~~Ak~~nmPkd~IerAIkk~~g~~-- 80 (247)
T 4f3q_A 3 AMAGHSKWANIKHAKARQDAKRGKVFTKLIREITVAARLGGEDIDSNPRLRAVVDKAFAANMPKDTITRAIKRGAGSG-- 80 (247)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCHHHHHHHHHHHHTTCCHHHHHHHHHHCC-----
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHhCCCHHHHHHHHHHhcCCC--
Confidence 37785 99999999999999999999999999999997 578999999999999999999999999999999999975
Q ss_pred CCcceEEEEEEEeccCCcEEEEEEecCCchhhHHHHHHhhhccCccccCCcceeEeeceeEEEEECCCCChhHHHHHHHh
Q psy15216 1267 ENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFNKNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALE 1346 (2602)
Q Consensus 1267 ~~~~~~~~~ye~~~p~g~~~~v~~~tdn~~r~~~~~r~~~~k~~g~~~~~g~v~~~f~~~g~~~~~~~~~~~~~~~~~~~ 1346 (2602)
++.+|++++|||||||||||||||||||+|||+++||++|+|+||+||++|||+|||+|||+|.++++.++|++||.|||
T Consensus 81 ~~~~yeei~YEgyGPgGvaviVe~lTDN~nRT~~~vR~~f~K~gG~lg~~GsV~~~F~~kG~i~~~~~~~~d~~~e~aie 160 (247)
T 4f3q_A 81 AGDNLVEVRYEGYGPSGVAVMVDCLTDNKNRTVAEVRHAFSKCDGNLGTEGSVAYLFKQRGLITFPPNSDEEKIMEIALE 160 (247)
T ss_dssp --CCCEEEEEEEECGGGCEEEEEEEESCHHHHHHHHHHHHHHTTCEECCTTSSGGGEEEEEEEEECTTCCHHHHHHHHHH
T ss_pred CcCCceEEEEEEEcCCCeEEEEEEeCCCHhHHHHHHHHHHHhcCceECCCCceeEEEeeeEEEEECCCCCHHHHHHHHHh
Confidence 36789999999999999999999999999999999999999999999999999999999999999877899999999999
Q ss_pred cCCceeeeccCceEEEEeCcccHHHHHHHHHhcCCCccccceeeeeceeeeccCCCCCCCHHHHHHHHHHHhh
Q psy15216 1347 KGAEDFLIDKDNKITIITSPSKFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDATTPIDPRVVDKMIPYLRV 1419 (2602)
Q Consensus 1347 ~g~~d~~~~~~~~~~~~~~~~~~~~v~~aL~~~g~~~~~~ei~~iP~~~v~L~~~~~~~~~~v~eal~~~l~~ 1419 (2602)
+|||||++++|+.|+|||+|++|.+|+++|+++|+++.++++.|+|++++.|+........+++++|++..+.
T Consensus 161 aGAeDv~~~edg~~~v~t~p~~~~~V~~aL~~~g~~~~~aei~~~P~~~v~l~~e~~~~~~klid~Led~dDV 233 (247)
T 4f3q_A 161 VGAEDVTTNDDGSIDVTTLPEDFEKIRNAMKAADLNPSHAEVTVLASTEVGLDKDSAEQMLRLTEMLEDLDDV 233 (247)
T ss_dssp HTCSEEEECTTSCEEEEECGGGHHHHHHHHHHTTCCCSEEEEEEEESSCEECCHHHHHHHHHHHHHHHTSTTE
T ss_pred CCCceeeecCCceEEEEECHHHHHHHHHHHHHcCCCeeEEEEEEecCCccccCHHHHHHHHHHHHHhhcCcCc
Confidence 9999997766778999999999999999999999999999999999999988655555555566666655554
No 14
>1mw7_A Hypothetical protein HP0162; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Helicobacter pylori} SCOP: e.39.1.1
Probab=100.00 E-value=2.9e-62 Score=552.25 Aligned_cols=223 Identities=26% Similarity=0.387 Sum_probs=184.9
Q ss_pred hcccCcccccccccccchhhHHHHHHHHHHHHHhc-CCCCCCChHHHHHHHHHHHcCCChhHHHHHHHhccCCCCCCCcc
Q psy15216 1192 NKAWGLEENSRLSFDAKRGKICTRIMRELRVAINF-GNNPDTNIKLRLAIEKALDANIPKNNIFRAIQKNNSNIKNENIN 1270 (2602)
Q Consensus 1192 ~~~~~~~~~srl~~d~~~~~~~~~~~~~i~~a~~~-g~~p~~n~~l~~~~~~a~~~~~p~~~i~~ai~~~~~~~~~~~~~ 1270 (2602)
+++|.+++|.|.+.|++|+|+|+||+|||++|||. ||||++|||||.||++||++||||||||||||||+|+ +.+
T Consensus 2 GsKWanIkh~K~~~Dakr~k~ftKl~keI~vAak~GG~DP~~N~~Lr~aI~kAk~~nmPkd~IerAIkk~~g~----~~~ 77 (240)
T 1mw7_A 2 GRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSK----EGN 77 (240)
T ss_dssp -------------------CCHHHHHHHHHHHHHTTCSCGGGCHHHHHHHHHHHHHTCCHHHHHHHHHHTTST----TCC
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHhCCCHHHHHHHHHHhcCC----CCC
Confidence 47899999999999999999999999999999975 5799999999999999999999999999999999996 456
Q ss_pred eEEEEEEEeccCCcEEEEEEecCCchhhHHHHHHhhhccC-ccccCCcceeEeeceeEEEEECC------CCChhHHHHH
Q psy15216 1271 YIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFNKNG-GNLSKEGSVLFMFKHCGQLLFLP------NTKKNTLLDL 1343 (2602)
Q Consensus 1271 ~~~~~ye~~~p~g~~~~v~~~tdn~~r~~~~~r~~~~k~~-g~~~~~g~v~~~f~~~g~~~~~~------~~~~~~~~~~ 1343 (2602)
|++++|||||||||||||||||||+|||+++||++|+|+| |+||++|||+|||+|||+|.+++ ..++|++||+
T Consensus 78 ~eei~YEgyGPgGvaiiVe~lTDN~nRt~~~vR~~f~K~g~G~lg~~GsV~~~F~~kG~i~~~~~~~~~~~~~ed~~le~ 157 (240)
T 1mw7_A 78 LSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFA 157 (240)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESCHHHHHHHHHHHHTTSTTCEEECTTTTTTSEEEEEEEEEEHHHHHHTTCCHHHHHHH
T ss_pred eEEEEEEEECCCceEEEEEEecCCHHHHHHHHHHHHhhcCCeeeCCCCcchhhheeeeEEEEecCccccCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999 99999999999999999999985 2699999999
Q ss_pred HHhcCCceeeeccCceEEEEeCcccHHHHHHHHHhcCCCccccceeeeeceeeeccCCCCCCCHHHHHHHHHHHhh
Q psy15216 1344 ALEKGAEDFLIDKDNKITIITSPSKFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDATTPIDPRVVDKMIPYLRV 1419 (2602)
Q Consensus 1344 ~~~~g~~d~~~~~~~~~~~~~~~~~~~~v~~aL~~~g~~~~~~ei~~iP~~~v~L~~~~~~~~~~v~eal~~~l~~ 1419 (2602)
|||+|||||+ ++|+.|+|||+|++|.+|+++|+++|+++.++++.|+|++++.|+........+++++|++..+.
T Consensus 158 aleaGAeDv~-~e~~~~~v~t~p~~~~~V~~aL~~~g~~~~~aei~~~P~~~v~l~~e~~~~~~klid~Led~DDV 232 (240)
T 1mw7_A 158 LIDYGLEELE-EVEDKIIIRGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDV 232 (240)
T ss_dssp HGGGTEEEEE-EETTEEEEEEEGGGHHHHHHHHHHTTCCCSEEEEEEEESSCBCCCHHHHHHHHHHHHHHHTSTTE
T ss_pred HHHCCCceee-cCCceEEEEECHHHHHHHHHHHHHcCCCeeeeeeEeCCCCCcccCHHHHHHHHHHHHHHhcccCc
Confidence 9999999996 56788999999999999999999999999999999999998877544444444555555544443
No 15
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=3.7e-53 Score=553.84 Aligned_cols=367 Identities=37% Similarity=0.563 Sum_probs=335.4
Q ss_pred ccCCceEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCCCC
Q psy15216 633 VKNKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDL 712 (2602)
Q Consensus 633 ~~~~~~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~ 712 (2602)
..++..+||||||||||+||++.+|.+++++|+.|++++||+|+|.++ +++||..|+.+...+|.++++++||+||+++
T Consensus 19 ~~~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~ 97 (404)
T 3i33_A 19 YFQSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTIFDAKRLIGRKF 97 (404)
T ss_dssp ----CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSS-CEEETHHHHHTTTTCSTTEECCGGGTTTCCT
T ss_pred hhccCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCC-CEEecHHHHHhhHhChhhhHHHHHHHhCCCC
Confidence 335667899999999999999999999999999999999999999766 6899999999999999999999999999998
Q ss_pred CCCC----CCCCCeeeecCCCceEEEEe--C--ceeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHHHHHH
Q psy15216 713 KNIN----TNSFPYDFQNKFGMLHIKTI--S--GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFT 784 (2602)
Q Consensus 713 ~~~~----~~~~~~~~~~~~~~~~~~~~--~--~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~~ 784 (2602)
++.. ...+||.+...+|...+... + ..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|
T Consensus 98 ~~~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 177 (404)
T 3i33_A 98 EDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQAT 177 (404)
T ss_dssp TSHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHH
T ss_pred CcHHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHH
Confidence 7742 23789998877777665543 3 58999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceEEEechhHHHHHHhhhccCc---ccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCcchHHHHH
Q psy15216 785 KNAAKLAGLNVLRLLNEPTSAAIAYKLDKNI---FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYC 861 (2602)
Q Consensus 785 ~~Aa~~AGl~~~~li~EPtAAAl~y~~~~~~---~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~ 861 (2602)
++|++.||++++++++||+|||++|+..... .+..++|||+||||||++++++.++.++++++.++..+||.+||+.
T Consensus 178 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~ 257 (404)
T 3i33_A 178 KDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNR 257 (404)
T ss_dssp HHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHH
Confidence 9999999999999999999999999887652 4678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcc-----CCHHHHHHHHHHHHHHHHHcccccceEEEEE-ecCCceEEEEeCHHHHHHHHHHHHHHHHHH
Q psy15216 862 LFSWIVKNAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILL 935 (2602)
Q Consensus 862 l~~~l~~~~~~~~-----~~~~~~~~l~~~~e~~K~~LS~~~~~~~~i~-~~~~~~~~~~itr~~fe~l~~~~~~~~~~~ 935 (2602)
|.+++.++|..+. .+++.+.+|+.+||++|+.||...+..+.++ +.++.++.++|+|++|+++++++++++.++
T Consensus 258 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~ 337 (404)
T 3i33_A 258 MVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEP 337 (404)
T ss_dssp HHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHH
T ss_pred HHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHH
Confidence 9999998876543 5788899999999999999999998888887 567888999999999999999999999999
Q ss_pred HHHHHHHcCCCccccceEEEecCccchHHHHHHHHhhc-cCcccCcCCcchHhHHHHHHHhHHhcC
Q psy15216 936 SSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFF-KTTLLTSIDPDKAVVFGAAIQANFLSG 1000 (2602)
Q Consensus 936 i~~~l~~a~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f-~~~~~~~~~p~~aVa~GAa~~a~~l~~ 1000 (2602)
|.++|+++++...+|+.|+||||+|++|+|+++|++.| +.++..+.||++|||+|||++|+++++
T Consensus 338 i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 338 VEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999 788888999999999999999999875
No 16
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=6e-53 Score=551.86 Aligned_cols=366 Identities=26% Similarity=0.392 Sum_probs=329.1
Q ss_pred CCceEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCCCCCC
Q psy15216 635 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKN 714 (2602)
Q Consensus 635 ~~~~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~ 714 (2602)
.++.+||||||||||+||++.+|.++++.|+.|++++||+|+|.+ +.++||..|+.+..++|.++++++||+||+++++
T Consensus 11 m~~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~-~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~ 89 (409)
T 4gni_A 11 GERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVD-GDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKS 89 (409)
T ss_dssp --CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEET-TEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGG
T ss_pred CCCcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECC-CcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccc
Confidence 356899999999999999999999999999999999999999975 4689999999999999999999999999999876
Q ss_pred CCCC--CCCeeeecCCCceEEEEeC--------ceeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHHHHHH
Q psy15216 715 INTN--SFPYDFQNKFGMLHIKTIS--------GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFT 784 (2602)
Q Consensus 715 ~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~~ 784 (2602)
.... .+++.+...+|.+.+.... ..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|
T Consensus 90 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 90 VDPTHNHASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp CCCGGGTTSCCCEEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhhhhhccccceecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 4332 4455555566777776543 47999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceEEEechhHHHHHHhhhcc--CcccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCcchHHHHHH
Q psy15216 785 KNAAKLAGLNVLRLLNEPTSAAIAYKLDK--NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCL 862 (2602)
Q Consensus 785 ~~Aa~~AGl~~~~li~EPtAAAl~y~~~~--~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l 862 (2602)
++|++.|||+++++|+||+|||++|+... ...+..++|||+||||||+|++++.++.++++++.++..+||.+||+.|
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i 249 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVL 249 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHH
Confidence 99999999999999999999999998764 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcc-------CCHHHHHHHHHHHHHHHHHcccccceEEEEE-ecCCceEEEEeCHHHHHHHHHHHHHHHHH
Q psy15216 863 FSWIVKNAFLKK-------LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTIL 934 (2602)
Q Consensus 863 ~~~l~~~~~~~~-------~~~~~~~~l~~~~e~~K~~LS~~~~~~~~i~-~~~~~~~~~~itr~~fe~l~~~~~~~~~~ 934 (2602)
++++.++|..+. .+.+.+.+|+.+||++|+.||...++.+.++ +.++.++.++|||++|+++++|+++++..
T Consensus 250 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~ 329 (409)
T 4gni_A 250 IDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNR 329 (409)
T ss_dssp HHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHH
Confidence 999999986432 4678899999999999999999999888888 57788999999999999999999999999
Q ss_pred HHHHHHHHcCCCccccceEEEecCccchHHHHHHHHhhccCc--c------cCcCCcchHhHHHHHHHhHHhcCC
Q psy15216 935 LSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTT--L------LTSIDPDKAVVFGAAIQANFLSGN 1001 (2602)
Q Consensus 935 ~i~~~l~~a~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~~~--~------~~~~~p~~aVa~GAa~~a~~l~~~ 1001 (2602)
+|+++|+++++...+|+.|+||||+|++|+|+++|++.|+.+ + ..+.||++|||+|||++|+.....
T Consensus 330 ~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 330 LVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999999999999999999999999865 3 577899999999999999887643
No 17
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.2e-51 Score=538.65 Aligned_cols=363 Identities=40% Similarity=0.608 Sum_probs=335.5
Q ss_pred CceEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCCCCCCC
Q psy15216 636 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNI 715 (2602)
Q Consensus 636 ~~~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~ 715 (2602)
+..+||||||||||+||++.+|.++++.|..|++++||+|+|.++ +++||..|+.+...+|.++++++||+||+++++.
T Consensus 17 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 95 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD-ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDR 95 (394)
T ss_dssp CCSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSS-CEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCH
T ss_pred CCCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCC-cEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcH
Confidence 357899999999999999999999999999999999999999766 6899999999999999999999999999998774
Q ss_pred CC----CCCCeeeecCCCceEEEEe--C--ceeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHHHHHHHHH
Q psy15216 716 NT----NSFPYDFQNKFGMLHIKTI--S--GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNA 787 (2602)
Q Consensus 716 ~~----~~~~~~~~~~~~~~~~~~~--~--~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~~~~A 787 (2602)
.. ..+||.+.+.++...+... + ..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 175 (394)
T 3qfu_A 96 SVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDA 175 (394)
T ss_dssp HHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 22 3689988877777666543 2 47899999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceEEEechhHHHHHHhhhccCcccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCcchHHHHHHHHHHH
Q psy15216 788 AKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIV 867 (2602)
Q Consensus 788 a~~AGl~~~~li~EPtAAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~ 867 (2602)
++.||++++++++||+|||++|++.....+..++|||+||||+|++++++.++.++++++.++..+||.+||+.|.+++.
T Consensus 176 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 255 (394)
T 3qfu_A 176 GTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLI 255 (394)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred HHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHH
Confidence 99999999999999999999998877666789999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcc-----CCHHHHHHHHHHHHHHHHHcccccceEEEEE-ecCCceEEEEeCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 868 KNAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALM 941 (2602)
Q Consensus 868 ~~~~~~~-----~~~~~~~~l~~~~e~~K~~LS~~~~~~~~i~-~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~ 941 (2602)
++|..+. .+.+.+.+|+.+||++|+.||...+..+.++ +.++.++.++++|++|+++++++++++.++|.++|+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~ 335 (394)
T 3qfu_A 256 KAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQ 335 (394)
T ss_dssp HHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8876543 5678899999999999999999998888887 567888999999999999999999999999999999
Q ss_pred HcCCCccccceEEEecCccchHHHHHHHHhhc-cCcccCcCCcchHhHHHHHHHhHHhc
Q psy15216 942 DANLTIKDINNVILVGGSTRMKHIHEGVSNFF-KTTLLTSIDPDKAVVFGAAIQANFLS 999 (2602)
Q Consensus 942 ~a~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f-~~~~~~~~~p~~aVa~GAa~~a~~l~ 999 (2602)
++++...+|+.|+|+||+|++|+|+++|++.| +.++..+.||++|||+|||++|++++
T Consensus 336 ~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 336 DSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999 78888999999999999999998864
No 18
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=4.7e-51 Score=533.93 Aligned_cols=365 Identities=27% Similarity=0.407 Sum_probs=323.0
Q ss_pred CcceEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCCcEEecHHHHhhhccCCCCchhhhhhhcCCCCCC
Q psy15216 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKN 2110 (2602)
Q Consensus 2031 ~~~~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~ 2110 (2602)
..+++||||||||||+||++.+|.++++.|+.|++++||+|+|. +++++||..|+.+...+|.++++++||+||+++.+
T Consensus 11 m~~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~-~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~ 89 (409)
T 4gni_A 11 GERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYV-DGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKS 89 (409)
T ss_dssp --CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEE-TTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGG
T ss_pred CCCcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEEC-CCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccc
Confidence 35689999999999999999999999999999999999999997 56789999999999999999999999999998766
Q ss_pred CCC--CCCCeeeecCCCceEEEecC--------ceeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHHHHHH
Q psy15216 2111 INT--NSFPYDFQNKFGMLHIKTIS--------GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFT 2180 (2602)
Q Consensus 2111 ~~~--~~~~~~~~~~~g~~~~~~~~--------~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l 2180 (2602)
... ...++.+....|.+.+.... ..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|
T Consensus 90 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 90 VDPTHNHASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp CCCGGGTTSCCCEEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhhhhhccccceecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 432 22344444555666655432 47899999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceeEeechhHHHHHHhhhcc--CCCCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCchhHHHHHH
Q psy15216 2181 KNAAKLAGLNVLRLLNEPTSAAIAYKLDK--NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCL 2258 (2602)
Q Consensus 2181 ~~Aa~~AGl~~~~li~EP~AAAl~y~~~~--~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l 2258 (2602)
++|++.||++++.+++||+|||++|.... ...+..++|||+||||||+|++++.++.++++++.++..+||.+||+.|
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i 249 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVL 249 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHH
Confidence 99999999999999999999999998764 2456789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcC--------ChhHHHHHHHHHHHHHHHhcccceEEEEEE-ecCCceEEEEcCHHHHHHHHHHHHHHHH
Q psy15216 2259 FSWIVKNAFLKKL--------SYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTI 2329 (2602)
Q Consensus 2259 ~~~l~~~~~~~~~--------~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~-~~~~~~~~~~itr~~fe~l~~~~~~~~~ 2329 (2602)
++++.+++ .++. ..+...+|+.+||++|+.||...+..+.++ +.++.++.++|||++|+++++|+++++.
T Consensus 250 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~ 328 (409)
T 4gni_A 250 IDHFSKEF-LKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFN 328 (409)
T ss_dssp HHHHHHHH-HHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHH-HHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHH
Confidence 99999874 3222 235678899999999999999999888887 5677889999999999999999999999
Q ss_pred HHHHHHHHHcCCCccccceEEEEeCccchHHHHHHHHhhcCCc--c------cCCCCccchhhhHHHHHhHHhcCC
Q psy15216 2330 LLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTT--L------LTSIDPDKAVVFGAAIQANFLSGN 2397 (2602)
Q Consensus 2330 ~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~--~------~~~~~p~~aVa~GAa~~a~~~~~~ 2397 (2602)
++|+++|+++++...+|+.|+||||+|++|+|+++|++.|+.+ + ....||++|||+|||++|+.....
T Consensus 329 ~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 329 RLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 9999999999999999999999999999999999999999865 3 578999999999999999887654
No 19
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=3.3e-51 Score=531.33 Aligned_cols=362 Identities=40% Similarity=0.614 Sum_probs=326.8
Q ss_pred eEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCCCCCCCC-
Q psy15216 638 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNIN- 716 (2602)
Q Consensus 638 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~- 716 (2602)
.+||||||||||+||++.+|.++++.|+.|.+++||+|+|.++++++||+.|+.+...+|.++++++||+||+++.+..
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 4699999999999999999999999999999999999999877789999999999999999999999999999876531
Q ss_pred ---CCCCCeeee-cCCCceEEEEeCceeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHHHHHHHHHHHHcC
Q psy15216 717 ---TNSFPYDFQ-NKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAG 792 (2602)
Q Consensus 717 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~~~~Aa~~AG 792 (2602)
...+||.+. ..++...+...+..++|+++++++|++|++.++++++.++.++|||||++|++.||+++++|++.||
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aG 162 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAG 162 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHTT
T ss_pred HHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 225788875 5667777777777899999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEechhHHHHHHhhhccCcccceEEEEEeCCceEEEEEEEEE----CCEEEEEEEecCCCCcchHHHHHHHHHHHH
Q psy15216 793 LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFK----NGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 868 (2602)
Q Consensus 793 l~~~~li~EPtAAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~----~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~ 868 (2602)
++++++++||+|||++|+......+..++|||+||||||+++++.. ++.++++++.++..+||++||+.|.+++.+
T Consensus 163 l~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~ 242 (383)
T 1dkg_D 163 LEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (383)
T ss_dssp CEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHH
T ss_pred CceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999987654356799999999999999999998 678999999999999999999999999999
Q ss_pred HHhhcc-----CCHHHHHHHHHHHHHHHHHcccccceEEEEEe-c---CC-ceEEEEeCHHHHHHHHHHHHHHHHHHHHH
Q psy15216 869 NAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVKL-S---DK-KIVNITIDMKQFFTITQHLVNRTILLSSK 938 (2602)
Q Consensus 869 ~~~~~~-----~~~~~~~~l~~~~e~~K~~LS~~~~~~~~i~~-~---~~-~~~~~~itr~~fe~l~~~~~~~~~~~i~~ 938 (2602)
+|..+. .+++.+.+|+.+||++|+.||...+..+.++. . +| .++.++|||++|+++++|+++++.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~ 322 (383)
T 1dkg_D 243 EFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKV 322 (383)
T ss_dssp HHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 886442 45788899999999999999998887777762 2 23 45678999999999999999999999999
Q ss_pred HHHHcCCCccccceEEEecCccchHHHHHHHHhhccCcccCcCCcchHhHHHHHHHhHHhc
Q psy15216 939 ALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLS 999 (2602)
Q Consensus 939 ~l~~a~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~l~ 999 (2602)
+|+++++.+.+++.|+|+||+|++|+|+++|++.|+.++..+.||++|||+|||++|++++
T Consensus 323 ~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 323 ALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999888999999999999999999999999998888999999999999999998663
No 20
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.2e-50 Score=530.11 Aligned_cols=366 Identities=37% Similarity=0.566 Sum_probs=328.7
Q ss_pred cCcceEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCCcEEecHHHHhhhccCCCCchhhhhhhcCCCCC
Q psy15216 2030 KNKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLK 2109 (2602)
Q Consensus 2030 ~~~~~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~ 2109 (2602)
...+.+||||||||||+||++.+|.++++.|+.|++++||+|+|.++ +++||..|+.+...+|.++++++||+||+++.
T Consensus 20 ~~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~ 98 (404)
T 3i33_A 20 FQSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFE 98 (404)
T ss_dssp ---CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSS-CEEETHHHHHTTTTCSTTEECCGGGTTTCCTT
T ss_pred hccCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCC-CEEecHHHHHhhHhChhhhHHHHHHHhCCCCC
Confidence 34566899999999999999999999999999999999999999754 78999999999999999999999999999987
Q ss_pred CCC----CCCCCeeeecCCCceEEEe--cC--ceeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHHHHHHH
Q psy15216 2110 NIN----TNSFPYDFQNKFGMLHIKT--IS--GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTK 2181 (2602)
Q Consensus 2110 ~~~----~~~~~~~~~~~~g~~~~~~--~~--~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~ 2181 (2602)
+.. .+.+||.+...+|...+.. .+ ..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|+
T Consensus 99 ~~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~ 178 (404)
T 3i33_A 99 DATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATK 178 (404)
T ss_dssp SHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHH
T ss_pred cHHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHH
Confidence 642 3578888876666655443 23 579999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCceeEeechhHHHHHHhhhccCC---CCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCchhHHHHHH
Q psy15216 2182 NAAKLAGLNVLRLLNEPTSAAIAYKLDKNI---FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCL 2258 (2602)
Q Consensus 2182 ~Aa~~AGl~~~~li~EP~AAAl~y~~~~~~---~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l 2258 (2602)
+|++.||++++.+++||+|||++|+..... .+..++|||+||||||++++++.++.++++++.++..+||.+||+.|
T Consensus 179 ~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l 258 (404)
T 3i33_A 179 DAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 258 (404)
T ss_dssp HHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 999999999999999999999999876542 46789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhc-----CChhHHHHHHHHHHHHHHHhcccceEEEEEE-ecCCceEEEEcCHHHHHHHHHHHHHHHHHHH
Q psy15216 2259 FSWIVKNAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILLS 2332 (2602)
Q Consensus 2259 ~~~l~~~~~~~~-----~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~-~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i 2332 (2602)
.+++.+++..+. ...+...+|+.+||++|+.||......+.++ +.++.++.++++|++|+++++++++++.+++
T Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i 338 (404)
T 3i33_A 259 VSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPV 338 (404)
T ss_dssp HHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHH
T ss_pred HHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHH
Confidence 999987632211 1345677899999999999999998888887 5677788999999999999999999999999
Q ss_pred HHHHHHcCCCccccceEEEEeCccchHHHHHHHHhhc-CCcccCCCCccchhhhHHHHHhHHhcC
Q psy15216 2333 SKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFF-KTTLLTSIDPDKAVVFGAAIQANFLSG 2396 (2602)
Q Consensus 2333 ~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~GAa~~a~~~~~ 2396 (2602)
.++|+++++...+|+.|+||||+|++|+|+++|++.| +.++..+.||++|||+|||++|+.+++
T Consensus 339 ~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 339 EKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999 788889999999999999999998875
No 21
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=2e-49 Score=517.82 Aligned_cols=364 Identities=40% Similarity=0.605 Sum_probs=329.3
Q ss_pred CcceEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCCcEEecHHHHhhhccCCCCchhhhhhhcCCCCCC
Q psy15216 2031 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKN 2110 (2602)
Q Consensus 2031 ~~~~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~ 2110 (2602)
.+..+||||||||||++|++.+|.++++.|+.|++++||+|+|.+ ++++||+.|+.+...+|.++++++||+||+++.+
T Consensus 16 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~-~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 94 (394)
T 3qfu_A 16 NYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTD-DERLIGDAAKNQVAANPQNTIFDIKRLIGLKYND 94 (394)
T ss_dssp CCCSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECS-SCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTC
T ss_pred cCCCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeC-CcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCc
Confidence 346789999999999999999999999999999999999999975 4789999999999999999999999999998776
Q ss_pred CC----CCCCCeeeecCCCceEEEec--C--ceeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHHHHHHHH
Q psy15216 2111 IN----TNSFPYDFQNKFGMLHIKTI--S--GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKN 2182 (2602)
Q Consensus 2111 ~~----~~~~~~~~~~~~g~~~~~~~--~--~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~~ 2182 (2602)
.. .+.+||.+.+.++...+... + ..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~ 174 (394)
T 3qfu_A 95 RSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKD 174 (394)
T ss_dssp HHHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHH
Confidence 42 35688888766665554432 2 4689999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeEeechhHHHHHHhhhccCCCCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCchhHHHHHHHHHH
Q psy15216 2183 AAKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWI 2262 (2602)
Q Consensus 2183 Aa~~AGl~~~~li~EP~AAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l 2262 (2602)
|++.||++++.+++||+|||++|++.....+..++|||+||||||++++++.++.++++++.++..+||.+||+.|.+++
T Consensus 175 a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 175 AGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 99999999999999999999999887766678999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhc-----CChhHHHHHHHHHHHHHHHhcccceEEEEEE-ecCCceEEEEcCHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 2263 VKNAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILLSSKAL 2336 (2602)
Q Consensus 2263 ~~~~~~~~-----~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~-~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l 2336 (2602)
.+++..+. .......+|+.+||++|+.||......+.++ +.++.++.++++|++|+++++++++++.+++.++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l 334 (394)
T 3qfu_A 255 IKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVL 334 (394)
T ss_dssp HHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87632211 1235677899999999999999998888887 56777889999999999999999999999999999
Q ss_pred HHcCCCccccceEEEEeCccchHHHHHHHHhhc-CCcccCCCCccchhhhHHHHHhHHhc
Q psy15216 2337 MDANLTIKDINNVILVGGSTRMKHIHEGVSNFF-KTTLLTSIDPDKAVVFGAAIQANFLS 2395 (2602)
Q Consensus 2337 ~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~GAa~~a~~~~ 2395 (2602)
++++....+|+.|+|+||+|++|+|+++|++.| +.++..+.||++|||+|||++|+.++
T Consensus 335 ~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 335 QDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999 78888999999999999999998764
No 22
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=4.2e-49 Score=511.60 Aligned_cols=362 Identities=40% Similarity=0.615 Sum_probs=320.9
Q ss_pred eEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCCcEEecHHHHhhhccCCCCchhhhhhhcCCCCCCC--
Q psy15216 2034 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNI-- 2111 (2602)
Q Consensus 2034 ~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~-- 2111 (2602)
.+||||||||||+||++.+|.++++.|++|.+.+||+|+|.++++++||+.|+.+...+|+++++++||+||+.+.+.
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 479999999999999999999999999999999999999987888999999999999999999999999999987543
Q ss_pred --CCCCCCeeee-cCCCceEEEecCceeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHHHHHHHHHHHHcC
Q psy15216 2112 --NTNSFPYDFQ-NKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAG 2188 (2602)
Q Consensus 2112 --~~~~~~~~~~-~~~g~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~~Aa~~AG 2188 (2602)
..+.+||.+. ..++...+...+..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|++.||
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aG 162 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAG 162 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHTT
T ss_pred HHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 2345788763 5566666666666899999999999999999999999889999999999999999999999999999
Q ss_pred CceeEeechhHHHHHHhhhccCCCCceEEEEEeCCceEEEEEEEEe----CCEEEEEEEecCCCCchhHHHHHHHHHHHH
Q psy15216 2189 LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFK----NGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 2264 (2602)
Q Consensus 2189 l~~~~li~EP~AAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~----~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~ 2264 (2602)
++++.+++||+|||++|+......+..++|||+||||||+++++.. ++.++++++.++..+||.+||+.|.+++.+
T Consensus 163 l~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~ 242 (383)
T 1dkg_D 163 LEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (383)
T ss_dssp CEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHH
T ss_pred CceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999987654356789999999999999999998 678899999998999999999999999998
Q ss_pred HHhhhc-----CChhHHHHHHHHHHHHHHHhcccceEEEEEEe-c---CC-ceEEEEcCHHHHHHHHHHHHHHHHHHHHH
Q psy15216 2265 NAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVKL-S---DK-KIVNITIDMKQFFTITQHLVNRTILLSSK 2334 (2602)
Q Consensus 2265 ~~~~~~-----~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~-~---~~-~~~~~~itr~~fe~l~~~~~~~~~~~i~~ 2334 (2602)
++..+. .......+|+.+||++|+.|+...+..+.++. . +| .++.++|||++|+++++|+++++.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~ 322 (383)
T 1dkg_D 243 EFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKV 322 (383)
T ss_dssp HHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 742221 12356678999999999999998887777762 2 22 45678999999999999999999999999
Q ss_pred HHHHcCCCccccceEEEEeCccchHHHHHHHHhhcCCcccCCCCccchhhhHHHHHhHHhc
Q psy15216 2335 ALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLS 2395 (2602)
Q Consensus 2335 ~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~~~ 2395 (2602)
+|+++++.+.+++.|+|+||+|++|+|+++|++.|+.++..+.||++|||+|||++|+.++
T Consensus 323 ~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 323 ALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999888999999999999999999999999999999999999999999999997653
No 23
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.2e-35 Score=379.05 Aligned_cols=310 Identities=20% Similarity=0.250 Sum_probs=243.4
Q ss_pred eEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecC-Cc-EEEcHHHHhhhccCCCCchhhhhhhhCCCCCCC
Q psy15216 638 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPD-GK-IYVGKKAKITQNIDPKNTISSIKRFIARDLKNI 715 (2602)
Q Consensus 638 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~-~~-~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~ 715 (2602)
.+||||||||||++++..++ .++ .+||+|+|.++ ++ ++||..|++...++|.++...
T Consensus 4 ~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~------------ 62 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI------------ 62 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE------------
T ss_pred ceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE------------
Confidence 46999999999999875433 232 27999999876 44 589999998888888776421
Q ss_pred CCCCCCeeeecCCCceEEEEeCceeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHHHHHHHHHHHHcCCce
Q psy15216 716 NTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNV 795 (2602)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~~~~Aa~~AGl~~ 795 (2602)
+|++ +|.+ .....+++++++++++++.. .+++ ...+|||||++|++.||+++++|++.||+++
T Consensus 63 ----~p~~----~g~i-----~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~ 125 (344)
T 1jce_A 63 ----RPMR----DGVI-----ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILDAGLEAGASK 125 (344)
T ss_dssp ----CCEE----TTEE-----SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHHHHHHTTCSE
T ss_pred ----ecCC----CCee-----CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHHHHHHcCCCe
Confidence 1221 1110 01113556666666555442 1233 3689999999999999999999999999999
Q ss_pred EEEechhHHHHHHhhhccCcccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCcchHHHHHHHHHHHHHHhhccC
Q psy15216 796 LRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKL 875 (2602)
Q Consensus 796 ~~li~EPtAAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~ 875 (2602)
+.+++||+|||++|+.... .+..++|||+||||||+++++... ++ ..++..+||.+||+.|.+++.+++....
T Consensus 126 ~~li~ep~Aaa~~~~~~~~-~~~~~lVvDiGggttdvsv~~~~~----~~-~~~~~~lGG~~id~~l~~~l~~~~~~~~- 198 (344)
T 1jce_A 126 VFLIEEPMAAAIGSNLNVE-EPSGNMVVDIGGGTTEVAVISLGS----IV-TWESIRIAGDEMDEAIVQYVRETYRVAI- 198 (344)
T ss_dssp EEEEEHHHHHHHHTTCCTT-SSSCEEEEEECSSCEEEEEEETTE----EE-EEEEESCSHHHHHHHHHHHHHHHHCEEC-
T ss_pred EeccCCHHHHHHhcCCCCC-CCceEEEEEeCCCeEEEEEEEcCC----EE-eeCCCCccChhHHHHHHHHHHHHhCccc-
Confidence 9999999999999987643 467899999999999999998743 22 2456799999999999999998764332
Q ss_pred CHHHHHHHHHHHHHHHHHcccccc------eEEEEE---ecCCceEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q psy15216 876 SYKDVNILMIKSREIKELLSYQSS------VKLNVK---LSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLT 946 (2602)
Q Consensus 876 ~~~~~~~l~~~~e~~K~~LS~~~~------~~~~i~---~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~a~~~ 946 (2602)
. +..||++|+.|+.... ..+.++ +.+|.+..++|+|++|+++++|.++++.+.|.++|++++..
T Consensus 199 ~-------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 271 (344)
T 1jce_A 199 G-------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPE 271 (344)
T ss_dssp C-------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHH
T ss_pred C-------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 1 4679999999987642 345554 34677788999999999999999999999999999987532
Q ss_pred --cccc-ceEEEecCccchHHHHHHHHhhccCcccCcCCcchHhHHHHHHHhHHhc
Q psy15216 947 --IKDI-NNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLS 999 (2602)
Q Consensus 947 --~~~i-~~V~LvGG~sr~P~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~l~ 999 (2602)
.+.+ +.|+|+||+|++|.|+++|++.|+.++..+.||++|||+||++++..++
T Consensus 272 ~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 272 LVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred hccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 2234 7899999999999999999999998888889999999999999997544
No 24
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=2e-34 Score=375.46 Aligned_cols=364 Identities=41% Similarity=0.758 Sum_probs=315.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||+++++++|+.+++++.+++...+.+|+. .+..++...+..+++++++++++|++++++++++|+|+|+.+++.++..
T Consensus 4 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~ 82 (382)
T 4hvk_A 4 FDYTSAKPVDERILEAMLPYMTESFGNPSS-VHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAM 82 (382)
T ss_dssp CBTTTCCCCCHHHHHHHHHHHHTSCCCTTC-SSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred ecCCCcCCCCHHHHHHHHHHHHhhcCCCcc-cchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhh
Confidence 799999999999999999999888888876 5667777788999999999999999888999999999999999998862
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~ 160 (2602)
...++||+|+++.++|+++...+..+++.|++++.+++++++.+|+++|++++++++++|++++++||||.+.|+++|.+
T Consensus 83 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~ 162 (382)
T 4hvk_A 83 RNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISE 162 (382)
T ss_dssp HHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHH
T ss_pred hhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHH
Confidence 22269999999999999999998888788999999999988999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCccccccccCcchhH
Q psy15216 161 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQ 240 (2602)
Q Consensus 161 la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~ 240 (2602)
+|++||+ +|+|++|+.+..++++...++|++++|+||++|++|+|+++++++. .+.+...++....++..++++...
T Consensus 163 l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 239 (382)
T 4hvk_A 163 VLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPS 239 (382)
T ss_dssp HHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGTSCTTCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHH
T ss_pred HHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhcCCCceEEEEEcCcc--CcCcccccCCCcCccccCCcCHHH
Confidence 9999999 9999999999888877767889999999999999999999999875 566666677667777889999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEccc
Q psy15216 241 IVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSG 318 (2602)
Q Consensus 241 ~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g 318 (2602)
+.++.+++++...++++..++..++++++.+.|.+ ++++++..++....++++.+.++..+..++.+.| +||.+++|
T Consensus 240 ~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g 318 (382)
T 4hvk_A 240 IVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK-IEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTG 318 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-STTEEECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCBCC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEeeC
Confidence 99999999876778899999999999999999986 7899988776555566777777777777787777 79999999
Q ss_pred ccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 319 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..|.+....+++.+..+|.+++...+++|++++.++|++|+++++++|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~ 369 (382)
T 4hvk_A 319 SACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV 369 (382)
T ss_dssp --------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 998876666677788888876555689999999999999999999999974
No 25
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.7e-34 Score=368.34 Aligned_cols=310 Identities=20% Similarity=0.252 Sum_probs=241.3
Q ss_pred eEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecC-Cc-EEecHHHHhhhccCCCCchhhhhhhcCCCCCCC
Q psy15216 2034 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPD-GK-IYVGKKAKITQNIDPKNTISSIKRFIARDLKNI 2111 (2602)
Q Consensus 2034 ~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~-~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~ 2111 (2602)
.+||||||||||++++..++ .++ .+||+|+|.++ ++ .+||+.|+....++|.++...
T Consensus 4 ~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~------------ 62 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI------------ 62 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE------------
T ss_pred ceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE------------
Confidence 47999999999999875333 232 27999999876 44 589999999888888776421
Q ss_pred CCCCCCeeeecCCCceEEEecCceeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHHHHHHHHHHHHcCCce
Q psy15216 2112 NTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNV 2191 (2602)
Q Consensus 2112 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~~Aa~~AGl~~ 2191 (2602)
+|++ .|.+ .....++++++.+|++++.. ..++ ...+|||||++|++.||+++++|++.||+++
T Consensus 63 ----~p~~----~g~i-----~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~ 125 (344)
T 1jce_A 63 ----RPMR----DGVI-----ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILDAGLEAGASK 125 (344)
T ss_dssp ----CCEE----TTEE-----SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHHHHHHTTCSE
T ss_pred ----ecCC----CCee-----CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHHHHHHcCCCe
Confidence 1111 1110 01113566666666555442 1233 3689999999999999999999999999999
Q ss_pred eEeechhHHHHHHhhhccCCCCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCchhHHHHHHHHHHHHHHhhhcC
Q psy15216 2192 LRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKL 2271 (2602)
Q Consensus 2192 ~~li~EP~AAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~ 2271 (2602)
+.+++||+|||++|+.... .+..++|||+||||||+++++... ++ ..++..+||.+||+.|.+++.+++ ....
T Consensus 126 ~~li~ep~Aaa~~~~~~~~-~~~~~lVvDiGggttdvsv~~~~~----~~-~~~~~~lGG~~id~~l~~~l~~~~-~~~~ 198 (344)
T 1jce_A 126 VFLIEEPMAAAIGSNLNVE-EPSGNMVVDIGGGTTEVAVISLGS----IV-TWESIRIAGDEMDEAIVQYVRETY-RVAI 198 (344)
T ss_dssp EEEEEHHHHHHHHTTCCTT-SSSCEEEEEECSSCEEEEEEETTE----EE-EEEEESCSHHHHHHHHHHHHHHHH-CEEC
T ss_pred EeccCCHHHHHHhcCCCCC-CCceEEEEEeCCCeEEEEEEEcCC----EE-eeCCCCccChhHHHHHHHHHHHHh-Cccc
Confidence 9999999999999986543 456899999999999999998753 22 345689999999999999998763 2112
Q ss_pred ChhHHHHHHHHHHHHHHHhcccce------EEEEEE---ecCCceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q psy15216 2272 SYKDVNILMIKSREIKELLSYQSS------VKLNVK---LSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLT 2342 (2602)
Q Consensus 2272 ~~~~~~~l~~~~e~~K~~ls~~~~------~~~~i~---~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~ 2342 (2602)
. ...+|++|+.++.... ..+.++ +.++.+..++|+|++|+++++|.++++.+.|.++|++++.+
T Consensus 199 ~-------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 271 (344)
T 1jce_A 199 G-------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPE 271 (344)
T ss_dssp C-------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHH
T ss_pred C-------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 1 4679999999987642 345544 33666678999999999999999999999999999988543
Q ss_pred --cccc-ceEEEEeCccchHHHHHHHHhhcCCcccCCCCccchhhhHHHHHhHHhc
Q psy15216 2343 --IKDI-NNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLS 2395 (2602)
Q Consensus 2343 --~~~i-~~V~LvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~GAa~~a~~~~ 2395 (2602)
.+.+ +.|+|+||+|++|.|+++|++.|+.++..+.||+++||+||++++..++
T Consensus 272 ~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 272 LVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred hccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 2234 6899999999999999999999999888889999999999999997543
No 26
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=3.2e-33 Score=364.21 Aligned_cols=364 Identities=41% Similarity=0.759 Sum_probs=304.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||+++++++|+.+++++.+.+...+++|+. .|..+....+..+++++++++++|++++++++|+|+|+|+++++.++..
T Consensus 4 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~ 82 (382)
T 4eb5_A 4 FDYTSAKPVDERILEAMLPYMTESFGNPSS-VHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAM 82 (382)
T ss_dssp CBTTTCCCCCHHHHHHHHHHHHTSCCCTTC-SSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred eccCCCCCCCHHHHHHHHHHHHhccCCCCC-CcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHh
Confidence 799999999999999999999876677765 4555556677899999999999999888999999999999999998752
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~ 160 (2602)
...++||+|++++++|+++...+..++..|++++.+++++++.+|+++|++++++++++|++++++||||.++|+++|.+
T Consensus 83 ~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~ 162 (382)
T 4eb5_A 83 RNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISE 162 (382)
T ss_dssp HHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHH
T ss_pred hccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHH
Confidence 21268999999999999998888877667999999999888889999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCccccccccCcchhH
Q psy15216 161 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQ 240 (2602)
Q Consensus 161 la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~ 240 (2602)
+|++||++ |+|++|++|..++++..+++|++++|+||++||+|+|+++++++. .+.+...+++....+..++++...
T Consensus 163 l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~ 239 (382)
T 4eb5_A 163 VLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPS 239 (382)
T ss_dssp HHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHH
T ss_pred HHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEcccc--ccCceecCCCccccccCCCccHHH
Confidence 99999999 999999988777666556789999999999999999999999864 344444444344456678889888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEccc
Q psy15216 241 IVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSG 318 (2602)
Q Consensus 241 ~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g 318 (2602)
+.++.++++....++++..++..++++++.+.|.+ ++++++..++....+..+.+.++..+..++.+.| +||.+++|
T Consensus 240 ~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g 318 (382)
T 4eb5_A 240 IVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK-IEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTG 318 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-STTEEECSCSSSBCTTEEEEEETTSCHHHHHHHHHHHTCBCBCC
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-CCCeEEeCCcccCCCCEEEEEeCCcCHHHHHHHHHHCCEEEecc
Confidence 88888899876667889999999999999999987 7888887654333345566677766677777777 79999999
Q ss_pred ccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 319 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..|.+....+++.+..+|.++....+++||+++.+++++|+++++++|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (382)
T 4eb5_A 319 SACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV 369 (382)
T ss_dssp CGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred ccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 888776556667777788753334589999999999999999999999964
No 27
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=4.7e-33 Score=367.83 Aligned_cols=368 Identities=67% Similarity=1.110 Sum_probs=321.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHh--hhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLR--VQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGA 78 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~--~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l 78 (2602)
||+++.+++|+.+++++.+.+. ..+++|+.+.+..++...+..+++++++++++|+++++|++++|+|+|+++++.++
T Consensus 26 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l 105 (423)
T 3lvm_A 26 LDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGA 105 (423)
T ss_dssp CBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHH
T ss_pred ecCCCcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHH
Confidence 7899999999999999999888 67778876456677777889999999999999998889999999999999999988
Q ss_pred ccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHH
Q psy15216 79 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (2602)
Q Consensus 79 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I 158 (2602)
.....++||+|+++.++|+++...+..++..|++++.++.++++.+|+++|++++++++++|++++++||||.++|+++|
T Consensus 106 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i 185 (423)
T 3lvm_A 106 ANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAI 185 (423)
T ss_dssp HHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHH
T ss_pred HHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHH
Confidence 73222479999999999999988887777789999999999889999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCccccccccCcch
Q psy15216 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238 (2602)
Q Consensus 159 ~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~ 238 (2602)
.++|++||+++|+|++|+.+..++++..+++|++++|+||++|+.|+|+++++++....+.+...+++....+..++++.
T Consensus 186 ~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (423)
T 3lvm_A 186 GEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPV 265 (423)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCH
T ss_pred HHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhcCCCCeEEEEEeccccCCCCccccCCcccccccCCCCCH
Confidence 99999999999999999999888888888899999999999999999999999998888888777766666677889999
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHhCCeEEccc
Q psy15216 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIKDIAVSSG 318 (2602)
Q Consensus 239 ~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~gI~v~~g 318 (2602)
..++++.++++.....+++..++..++++++.+.|.+ ++++++..++....+.++.+.++..+..++...|..|.+++|
T Consensus 266 ~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~v~~g 344 (423)
T 3lvm_A 266 HQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKD-IEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSG 344 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-STTEEEESCSTTBCTTEEEEEETTSCHHHHHHHTTTEECBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCccccCCCeEEEEeCCCCHHHHHHHHhhheeccC
Confidence 9999998999876666889999999999999999977 789999877665556777788877778888888855999999
Q ss_pred ccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 319 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..|.+...++++.+..+|+.+....+++||+++.+++++|+++++++|++.
T Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~ 395 (423)
T 3lvm_A 345 SACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKS 395 (423)
T ss_dssp CC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred ccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHH
Confidence 999887677778888888876555689999999999999999999999974
No 28
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=5.6e-33 Score=361.80 Aligned_cols=365 Identities=41% Similarity=0.744 Sum_probs=311.1
Q ss_pred eeccC-CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhh
Q psy15216 1396 IVFKD-ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGA 1474 (2602)
Q Consensus 1396 v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l 1474 (2602)
+|||. ...+.++.+.+++.+.+...+++|+. .|..++......+++++++++++|++++++++|+|+|+|+.+++.++
T Consensus 2 iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~ 80 (382)
T 4hvk_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSS-VHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTC-SSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred EeecCCCcCCCCHHHHHHHHHHHHhhcCCCcc-cchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHh
Confidence 57764 44688899999999999888888886 57777788889999999999999998889999999999999999988
Q ss_pred hhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHH
Q psy15216 1475 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 1554 (2602)
Q Consensus 1475 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I 1554 (2602)
.....++||+|++++++|+++...+..+...|++++.++.++++.+|+++|+++++++|++|++++++||||.+.|+++|
T Consensus 81 ~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i 160 (382)
T 4hvk_A 81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEI 160 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHH
T ss_pred hhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHH
Confidence 62222799999999999999999888887789999999999888999999999999999999999999999999999999
Q ss_pred HHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccccCCccccCCCCCcch
Q psy15216 1555 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 1634 (2602)
Q Consensus 1555 ~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~ 1634 (2602)
.++|++||+ +|+|++|+.|..++++..+++|++++|+||++||.|+|+++++++. .+.+...++....++..++++.
T Consensus 161 ~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 237 (382)
T 4hvk_A 161 SEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQPVILGGGQENGLRSGSENV 237 (382)
T ss_dssp HHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGTSCTTCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCH
T ss_pred HHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhcCCCceEEEEEcCcc--CcCcccccCCCcCccccCCcCH
Confidence 999999999 9999999999887777767889999999999999999999999875 5666666776677788899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEc
Q psy15216 1635 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVS 1712 (2602)
Q Consensus 1635 ~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~ 1712 (2602)
..+.++.+++.+...++++..++..++++++.+.|.+ ++++.+..++....++...+.++..+..++...| +||.++
T Consensus 238 ~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~ 316 (382)
T 4hvk_A 238 PSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK-IEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQAS 316 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-STTEEECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCB
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEe
Confidence 9999999999877778899999999999999999986 7899988766555566777777766777777766 899999
Q ss_pred cccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1713 SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1713 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+|..|......+++....++.++....+++||+++.++|.+|+++++++|++.
T Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~ 369 (382)
T 4hvk_A 317 TGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV 369 (382)
T ss_dssp CC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred eCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 99988776555667777788765545689999999999999999999999973
No 29
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=2.6e-32 Score=355.80 Aligned_cols=364 Identities=40% Similarity=0.636 Sum_probs=295.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||+++++++|+.+.+++.+.+...+.+|+. .+.+++......+++++++++++|+++++|++++|+|+|+++++.++..
T Consensus 5 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~ 83 (384)
T 1eg5_A 5 FDNNATTRVDDRVLEEMIVFYREKYGNPNS-AHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAE 83 (384)
T ss_dssp CBTTTCCCCCHHHHHHHHHHHHTCCCCTTC-SSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHH
T ss_pred EecCccCCCCHHHHHHHHHHHHhcCCCCcc-ccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhh
Confidence 799999999999999999999876667765 4566677778899999999999999888999999999999999999861
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~ 160 (2602)
..+++||+|+++.++|+++...+..++..|++++.++.++++.+|+++|++++++++++|++++++||||.++|+++|.+
T Consensus 84 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~ 163 (384)
T 1eg5_A 84 TFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTR 163 (384)
T ss_dssp HTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHH
T ss_pred hccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHH
Confidence 11258999999999999998888766667999999999888889999999999999999999999999999999999999
Q ss_pred HHHhcC--CEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCccccccccCcch
Q psy15216 161 LCRSKG--VIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238 (2602)
Q Consensus 161 la~~~g--~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~ 238 (2602)
+|++|| +++|+|++|+++..++++..+++|++++|+||++||+|+|++++++++ .+.+.+.++.....+..++++.
T Consensus 164 l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 241 (384)
T 1eg5_A 164 IVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGV--PIRPLIHGGGQERGLRSGTQNV 241 (384)
T ss_dssp HHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTS--CCCCSBCSSCTTTTTBCSCCCH
T ss_pred HHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEEEEcCCC--ccccccccCcccccccCCCCCh
Confidence 999999 999999999988777777777899999999999999999999999875 3344443333333445678898
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEc
Q psy15216 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVS 316 (2602)
Q Consensus 239 ~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~ 316 (2602)
..+.++.++++....++++..+++.++++++.+.|.+ +++++..++....+..+.+.++..+..++.+.| +||.++
T Consensus 242 ~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~ 319 (384)
T 1eg5_A 242 PGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN--LGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVS 319 (384)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT--TTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECB
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC--CCeEEeCCcccCCCCEEEEEeCCCCHHHHHHHHhhCCeEEe
Confidence 8888888899865567889999999999999999987 688887654433455667777666677777777 799999
Q ss_pred ccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 317 SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+|..|.+....+.+.+..+|.++....+++||+++.+++++|+++++++|++.
T Consensus 320 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 372 (384)
T 1eg5_A 320 TSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEI 372 (384)
T ss_dssp C------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred ccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 99877654334455566667653223478999999999999999999999964
No 30
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=9e-32 Score=355.54 Aligned_cols=372 Identities=65% Similarity=1.081 Sum_probs=319.9
Q ss_pred ceeeeccC-CCCCCCHHHHHHHHHHHh--hccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q psy15216 1393 YTNIVFKD-ATTPIDPRVVDKMIPYLR--VQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNL 1469 (2602)
Q Consensus 1393 ~~~v~L~~-~~~~~~~~v~eal~~~l~--~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~ 1469 (2602)
...+||+. +..+.++.+++++.+.+. ..+++|+.+.+..++.......++++++++++++++++|++|+|+|+|+.+
T Consensus 21 ~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~ 100 (423)
T 3lvm_A 21 KLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNL 100 (423)
T ss_dssp CSSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred CCCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHH
Confidence 45678874 446888999999999988 677888765677778888899999999999999988899999999999999
Q ss_pred HHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEecccccccccc
Q psy15216 1470 AIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQ 1549 (2602)
Q Consensus 1470 al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~ 1549 (2602)
++.++.....++||+|+++.++|+++...+..+...|++++.++.++++.+|+++|++++++++++|++++++||||.++
T Consensus 101 a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~ 180 (423)
T 3lvm_A 101 AIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQ 180 (423)
T ss_dssp HHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBC
T ss_pred HHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCcccc
Confidence 99988732224799999999999999888877777799999999998888999999999999999999999999999999
Q ss_pred ChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccccCCccccCCC
Q psy15216 1550 PILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRS 1629 (2602)
Q Consensus 1550 ~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 1629 (2602)
|+++|.++|++||+++|+|++|+.+..++++..+++|++++|+||++|+.|+|+++++++....+.+...++.....+..
T Consensus 181 ~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (423)
T 3lvm_A 181 DIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRS 260 (423)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCSSCTTTTTCC
T ss_pred CHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhcCCCCeEEEEEeccccCCCCccccCCcccccccC
Confidence 99999999999999999999999998888888888999999999999999999999999888888887777766666778
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhcCCE
Q psy15216 1630 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIKDI 1709 (2602)
Q Consensus 1630 gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L~gI 1709 (2602)
++++...+.++.++++.....+++..++..++++++.+.|.+ ++++.+..++....+.+..+.++..+...+...|..|
T Consensus 261 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i 339 (423)
T 3lvm_A 261 GTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKD-IEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDL 339 (423)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-STTEEEESCSTTBCTTEEEEEETTSCHHHHHHHTTTE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCccccCCCeEEEEeCCCCHHHHHHHHhhh
Confidence 899999999998999876666889999999999999999977 7899998766655667777888767777888888559
Q ss_pred EEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1710 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1710 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.+++|..|.+....+.+....++.......+++||+++..+|.+|+++++++|++.
T Consensus 340 ~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~ 395 (423)
T 3lvm_A 340 AVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKS 395 (423)
T ss_dssp ECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred eeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHH
Confidence 99999988876566677777888775555689999999999999999999999974
No 31
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=7.7e-32 Score=351.13 Aligned_cols=365 Identities=41% Similarity=0.745 Sum_probs=300.1
Q ss_pred eeccC-CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhh
Q psy15216 1396 IVFKD-ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGA 1474 (2602)
Q Consensus 1396 v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l 1474 (2602)
+|||. +..+.++.+++++.+.+...+++|++ .|..+........++|+++++++|++++++++|+|+|+|+++++.++
T Consensus 2 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l 80 (382)
T 4eb5_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSS-VHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTC-SSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred eeeccCCCCCCCHHHHHHHHHHHHhccCCCCC-CcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHH
Confidence 57764 44688999999999999876677775 46666667788999999999999998889999999999999999988
Q ss_pred hhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHH
Q psy15216 1475 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 1554 (2602)
Q Consensus 1475 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I 1554 (2602)
.....++||+|++++++|+++...+..+...|++++.++.++++.+|+++|++++++++++|++++++||||.++|+++|
T Consensus 81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i 160 (382)
T 4eb5_A 81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEI 160 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHH
T ss_pred HhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHH
Confidence 52222689999999999999988887766679999999998888899999999999999999999999999999999999
Q ss_pred HHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccccCCccccCCCCCcch
Q psy15216 1555 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 1634 (2602)
Q Consensus 1555 ~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~ 1634 (2602)
.++|++||++ |+|++|++|..++++..+++|++++|+||++||+|+|+++++++. .+.+...++.....+..++++.
T Consensus 161 ~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~ 237 (382)
T 4eb5_A 161 SEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQPVILGGGQENGLRSGSENV 237 (382)
T ss_dssp HHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCH
T ss_pred HHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEcccc--ccCceecCCCccccccCCCccH
Confidence 9999999999 999999988776666556789999999999999999999999864 3444444443444566788888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEc
Q psy15216 1635 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVS 1712 (2602)
Q Consensus 1635 ~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~ 1712 (2602)
..+.++.++++....++++..+++.++++++.+.|.+ ++++.+..+.....+....+.+++.+..++...| +||.++
T Consensus 238 ~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~ 316 (382)
T 4eb5_A 238 PSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK-IEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQAS 316 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-STTEEECSCSSSBCTTEEEEEETTSCHHHHHHHHHHHTCBCB
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-CCCeEEeCCcccCCCCEEEEEeCCcCHHHHHHHHHHCCEEEe
Confidence 8888888899876667888999999999999999987 7888887654333345556666655666777666 799999
Q ss_pred cccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1713 SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1713 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+|..|......+++....+|.++....+++||+++.++|.+|+++++++|++.
T Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (382)
T 4eb5_A 317 TGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV 369 (382)
T ss_dssp CCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred ccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 99887665444556666677653334589999999999999999999999973
No 32
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=8.5e-33 Score=362.52 Aligned_cols=365 Identities=40% Similarity=0.628 Sum_probs=297.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||+++++++|+.+++++.+.+...+.+|+. .+.+++...+..+++++++++++|+++++|++++|+|+|+++++.++..
T Consensus 24 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~ 102 (400)
T 3vax_A 24 LDAAATTRVDQRVADIVLHWMTAEFGNAGS-RHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAP 102 (400)
T ss_dssp CCCCCCSSSCHHHHHHHHHHHHHHHSCSSC-HHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHH
T ss_pred ecCCCCCCCCHHHHHHHHHHHHhccCCCcc-cchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHH
Confidence 799999999999999999999887778875 4556666678899999999999999888999999999999999998852
Q ss_pred ccccCCC-EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHH
Q psy15216 81 FYKKRGK-HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIG 159 (2602)
Q Consensus 81 ~~~~~gd-~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~ 159 (2602)
...++|| +|+++.++|+++...+..+++.|++++.+++++++.+|+++|++++++++++|++++++||||.+.|+++|.
T Consensus 103 ~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~ 182 (400)
T 3vax_A 103 YGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELA 182 (400)
T ss_dssp HHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHH
T ss_pred hhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHH
Confidence 2225899 999999999999998888877899999999988899999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEE-EecCCC----CcccceecCCCcccccccc
Q psy15216 160 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALY-IRRNPR----TRIEAQIHGGGHEYGLRSG 234 (2602)
Q Consensus 160 ~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~-~~~~~~----~~l~~~~~g~~~~~~~~~g 234 (2602)
++|++||+++|+|++|+.+..++++..+ +|++++|+||++|+.|+|+++ ++++.. ..+.+...++.....+..+
T Consensus 183 ~la~~~~~~li~D~a~~~~~~~~~~~~~-~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (400)
T 3vax_A 183 QQLRATPTYLHVDAAQGYGKVPGDLTTP-IDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPG 261 (400)
T ss_dssp HHHTTSSCEEEEECTTTTTTSGGGGGSC-CSEEEEETGGGTSCSSCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCS
T ss_pred HHHHhcCCEEEEEhhhhcCCCCcChhhc-CcEEEEeHHHhCCCCceEEEEEecchhccccccccCceecCCCceeeeecC
Confidence 9999999999999999999888887777 899999999999999999999 887322 3456666565556667788
Q ss_pred CcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh-CCe
Q psy15216 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI-KDI 313 (2602)
Q Consensus 235 t~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~gI 313 (2602)
+++..+++++.++++....++++..+++.++++++.+.|. .+++++..++....+.++.+.++..+..++.+.| +||
T Consensus 262 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~gi 339 (400)
T 3vax_A 262 TLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA--STSFQVNGDQDHVVPHILNLSFEDVDAEAFLVTLKDLV 339 (400)
T ss_dssp CCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT--TTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC--CCCEEEeCCcccCCCCEEEEEeCCCCHHHHHHHHhcCc
Confidence 9999999999899987777889999999999999999997 5899988766544556667777766666666655 789
Q ss_pred EEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec-CCCCCHHHHHHHHHHHHhh
Q psy15216 314 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 314 ~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~-~~~~t~edid~li~~L~~~ 369 (2602)
.+++|..|.+....+++.+..+|.++....+++||++ +.+++++|+++++++|++.
T Consensus 340 ~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~ 396 (400)
T 3vax_A 340 AVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKL 396 (400)
T ss_dssp HHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-----------------
T ss_pred EEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHH
Confidence 9999988876555667777888887655568999999 9999999999999999863
No 33
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=6.7e-31 Score=342.47 Aligned_cols=365 Identities=40% Similarity=0.640 Sum_probs=291.6
Q ss_pred eeccC-CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhh
Q psy15216 1396 IVFKD-ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGA 1474 (2602)
Q Consensus 1396 v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l 1474 (2602)
+|||. +..+.++.+.+++.+.++..+++|+. .+.+++.......++++++++++|++++++++|+|+|+|++.++.++
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~ 81 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNS-AHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTV 81 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTC-SSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCcc-ccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhh
Confidence 67764 44578899999999999876677765 56667777888999999999999998889999999999999999998
Q ss_pred hhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHH
Q psy15216 1475 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 1554 (2602)
Q Consensus 1475 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I 1554 (2602)
....+++||+|++++++|+++...+..+...|++++.++.++++.+|+++|++++++++++|++++++||||.++|+++|
T Consensus 82 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i 161 (384)
T 1eg5_A 82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDV 161 (384)
T ss_dssp HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHH
T ss_pred hhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHH
Confidence 62112689999999999999888886666679999999998888899999999999999999999999999999999999
Q ss_pred HHHhhhcC--CEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccccCCccccCCCCCc
Q psy15216 1555 GELCRSKG--VIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 1632 (2602)
Q Consensus 1555 ~~ia~~~g--i~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~ 1632 (2602)
.++|++|| +++|+|++|++|..++++..+++|++++|+||++||+|+|++++++++ .+.+.+.++.....+..+++
T Consensus 162 ~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 239 (384)
T 1eg5_A 162 TRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGV--PIRPLIHGGGQERGLRSGTQ 239 (384)
T ss_dssp HHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTS--CCCCSBCSSCTTTTTBCSCC
T ss_pred HHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEEEEcCCC--ccccccccCcccccccCCCC
Confidence 99999999 999999999988777777777899999999999999999999999875 33433333333234556788
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEE
Q psy15216 1633 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIA 1710 (2602)
Q Consensus 1633 ~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~ 1710 (2602)
+...+.++.++|+....++++..+++.++++++.+.|.+ +++.+..++....+....+.++..+..++...| +||.
T Consensus 240 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 317 (384)
T 1eg5_A 240 NVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN--LGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIY 317 (384)
T ss_dssp CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT--TTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEE
T ss_pred ChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC--CCeEEeCCcccCCCCEEEEEeCCCCHHHHHHHHhhCCeE
Confidence 888888888888865567888999999999999999987 688877654443456677777655666777666 8999
Q ss_pred EccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1711 VSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1711 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+++|..|......+.+.+..++.++....+++||+++.++|.+|+++++++|++.
T Consensus 318 v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 372 (384)
T 1eg5_A 318 VSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEI 372 (384)
T ss_dssp CBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 9999877653223344555566542223479999999999999999999999973
No 34
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=6.4e-32 Score=354.22 Aligned_cols=375 Identities=40% Similarity=0.618 Sum_probs=293.9
Q ss_pred cceeeeeceeeeccC-CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHH
Q psy15216 1386 SGIVMRPYTNIVFKD-ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGAT 1464 (2602)
Q Consensus 1386 ~ei~~iP~~~v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT 1464 (2602)
....+.++..+||+. +..+.++.+.+++.+.+...+++|+. .+..++.......++++++++++|+++++|++|+|+|
T Consensus 12 ~~~~~~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t 90 (400)
T 3vax_A 12 SGLVPRGSHMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGS-RHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGAT 90 (400)
T ss_dssp ----------CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSC-HHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHH
T ss_pred cCCCcccCCcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcc-cchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHH
Confidence 445566778899984 44678899999999999887788876 5666667778899999999999999888999999999
Q ss_pred HHHHHHHHhhhhhhccCCC-EEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEecccc
Q psy15216 1465 ESNNLAIKGAAHFYKKRGK-HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNN 1543 (2602)
Q Consensus 1465 ~al~~al~~l~~~~~~~gd-~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n 1543 (2602)
+|+++++.++.....++|| +|++++++|+++...+..+...|++++.++.++++.+|+++|+++++++|++|++++++|
T Consensus 91 ~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n 170 (400)
T 3vax_A 91 ESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNN 170 (400)
T ss_dssp HHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCT
T ss_pred HHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCC
Confidence 9999999988522226899 999999999999988888777799999999998899999999999999999999999999
Q ss_pred ccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEE-EecCCC----Ccccccc
Q psy15216 1544 EIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALY-IRRNPR----TRIEAQI 1618 (2602)
Q Consensus 1544 ~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~-~~~~~~----~~l~~~~ 1618 (2602)
|||.+.|+++|.++|++||+++|+|++|+.+..+.++..+ +|++++|+||++||.|+|+++ ++++.+ ..+.+..
T Consensus 171 ptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~-~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 249 (400)
T 3vax_A 171 ETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP-IDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPIM 249 (400)
T ss_dssp TTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-CSEEEEETGGGTSCSSCEEEEECBCSSSTTCBCCCCCSS
T ss_pred CceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-CcEEEEeHHHhCCCCceEEEEEecchhccccccccCcee
Confidence 9999999999999999999999999999999888887777 999999999999999999999 987322 3455655
Q ss_pred ccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCC
Q psy15216 1619 HGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE 1698 (2602)
Q Consensus 1619 ~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~ 1698 (2602)
.++.....+..++++...+.++.++++....++++..+++.++++++.+.|. .+++.+..+.....+.+..+.++..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (400)
T 3vax_A 250 FGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA--STSFQVNGDQDHVVPHILNLSFEDVD 327 (400)
T ss_dssp CSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT--TTTCEECSCTTSBCTTEEEEECTTCC
T ss_pred cCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC--CCCEEEeCCcccCCCCEEEEEeCCCC
Confidence 5665666777889999999999899987777789999999999999999997 58998887655445566677766656
Q ss_pred cHHHHHhc-CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEec-CCCCCHHHHHHHHHHHHH
Q psy15216 1699 GESLLMAI-KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1699 ~~~~~~~L-~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~-~~~~t~edid~li~~L~~ 1764 (2602)
..++...| +||.+++|..|......+++....+|..+....+++||++ +.++|.+++++++++|++
T Consensus 328 ~~~l~~~L~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~ 395 (400)
T 3vax_A 328 AEAFLVTLKDLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAK 395 (400)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC----------------
T ss_pred HHHHHHHHhcCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHH
Confidence 66666555 7898999887765444456667777776554568999999 999999999999999986
No 35
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=6.3e-31 Score=345.50 Aligned_cols=355 Identities=22% Similarity=0.335 Sum_probs=291.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~-~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
||+++.++.|+.+.+++.+.+...+.+|+.+.+..++......+++|+++++++|. ++++|++++|+|+|+++++.++.
T Consensus 27 l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~ 106 (406)
T 1kmj_A 27 LDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWG 106 (406)
T ss_dssp CCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTH
T ss_pred ecCCccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhh
Confidence 68888889999999999999988777777655556666778899999999999999 67899999999999999999982
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHH-HHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHH
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I 158 (2602)
...+++||+|+++.++|++....+.. ++..|++++.++.++++.+|+++|++++++++++|++++++||||.++|+++|
T Consensus 107 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i 186 (406)
T 1kmj_A 107 NSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEM 186 (406)
T ss_dssp HHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHH
T ss_pred hhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccCCeEEEEeCCCccccCcCCHHHH
Confidence 00027999999999999997655433 34569999999998888899999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCc-----------
Q psy15216 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGH----------- 227 (2602)
Q Consensus 159 ~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~----------- 227 (2602)
.++|++||+++|+|++|+.|..++++..+++|++++|+||.+||+|+|++++++++++.+.+...+|+.
T Consensus 187 ~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (406)
T 1kmj_A 187 ITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTT 266 (406)
T ss_dssp HHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEE
T ss_pred HHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhccCCCCcEEEEEeHHHHhhcCCcccCCCceeecccccccc
Confidence 999999999999999999988776666667899999999988999999999998887777766555432
Q ss_pred ----cccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccC
Q psy15216 228 ----EYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE 302 (2602)
Q Consensus 228 ----~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 302 (2602)
+.++..|++++.+++++.+++++.. .++++..++..++++++.+.|.+ ++++++..+. . ...++.+.++..+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~-~-~~~~~~~~~~~~~ 343 (406)
T 1kmj_A 267 WTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLES-VPDLTLYGPQ-N-RLGVIAFNLGKHH 343 (406)
T ss_dssp ECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT-STTEEEESCT-T-CCSEEEEEETTCC
T ss_pred cCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCC-C-cCCEEEEEECCCC
Confidence 1245567889888888888888654 46788999999999999999988 6799887653 1 2344555565556
Q ss_pred hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 303 GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 303 ~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..++.+.| +||.+++|..|.++ .+..+|. .+++||+++.++|++|+++++++|++.
T Consensus 344 ~~~~~~~l~~~gi~v~~g~~~~~~------~~~~~g~-----~~~iRis~~~~~t~~~i~~~~~~l~~~ 401 (406)
T 1kmj_A 344 AYDVGSFLDNYGIAVRTGHHCAMP------LMAYYNV-----PAMCRASLAMYNTHEEVDRLVTGLQRI 401 (406)
T ss_dssp HHHHHHHHHHTTEECEEECTTCHH------HHHHTTC-----SCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCcEEEeccccchH------HHHhcCC-----CCeEEEEeecCCCHHHHHHHHHHHHHH
Confidence 66777666 79999999877542 2233443 379999999999999999999999964
No 36
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.98 E-value=1e-30 Score=343.39 Aligned_cols=353 Identities=17% Similarity=0.233 Sum_probs=288.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||+++++++|+.+.+++.+.+...+.+|.. .+.++....+..+++++++++++|+++++|++++|+|+++++++.++.
T Consensus 30 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~- 107 (406)
T 3cai_A 30 FDAPAGMLIPDSVATTVSTAFRRSGASTVG-AHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASS- 107 (406)
T ss_dssp CBGGGCCCCCHHHHHHHHHHHHHCCSSSCS-SSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTG-
T ss_pred EeCCCcCCCCHHHHHHHHHHHHhcCCCCCC-ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHh-
Confidence 688888899999999999999876666643 455555567789999999999999988899999999999999998871
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHH-HhCCcEEEEeccC-CCCccChHHHHhhccCCceEEEEecccCcccccccHHHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~~~-~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I 158 (2602)
..+++||+|+++.++|+++...+..+ ++.|++++.++++ +++.+|+++|+++++++|++|++++++||||.++|+++|
T Consensus 108 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i 187 (406)
T 3cai_A 108 SRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAM 187 (406)
T ss_dssp GGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCHHH
T ss_pred hccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHHHH
Confidence 01379999999999999988877664 3359999999988 678899999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcE-EEEEecCCCCccccee--cCCCccccccccC
Q psy15216 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIG-ALYIRRNPRTRIEAQI--HGGGHEYGLRSGT 235 (2602)
Q Consensus 159 ~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G-~l~~~~~~~~~l~~~~--~g~~~~~~~~~gt 235 (2602)
.++|+++|+++|+|++|+.|..++++..+++|++++|+||++||. +| ++++++++++.+.+.. +++..+.++..|+
T Consensus 188 ~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~g~~-~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t 266 (406)
T 3cai_A 188 TKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGV 266 (406)
T ss_dssp HHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGTSCS-CEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSC
T ss_pred HHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhcCCC-cCeEEEEehHHHhhcCCcccCCCCCccccccCCC
Confidence 999999999999999999988777776678899999999998976 88 9999988776676553 2222344566789
Q ss_pred cchhHHHHHHHHHHHHHH---------------hHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc
Q psy15216 236 LATHQIVGMGEAFRLARI---------------EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF 300 (2602)
Q Consensus 236 ~~~~~~~al~~al~~~~~---------------~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~ 300 (2602)
++..+++++.+++++... ++++..++..++++++.+.|.+ +++++++.+.....+ .+.+.++.
T Consensus 267 ~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~-~~~~~~~~ 344 (406)
T 3cai_A 267 HQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRS-LPLVMLIGRPEAQIP-VVSFAVHK 344 (406)
T ss_dssp CCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CTTEEECCCCSSBCS-EEEEEETT
T ss_pred ccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhc-CCCeEEcCCccccCC-EEEEEECC
Confidence 999999888888886554 4788899999999999999988 788988765433333 45666666
Q ss_pred cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 301 IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 301 ~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
.+..++.+.| +||.+++|. + ...+..+|..+ ..+++||+++.+++++|+++++++|++
T Consensus 345 ~~~~~~~~~L~~~gi~v~~g~---~-----~~~~~~~g~~~--~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 345 VPADRVVQRLADNGILAIANT---G-----SRVLDVLGVND--VGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp BCHHHHHHHHHHTTEECEECC---S-----CHHHHHHTTTT--TTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHCCcEEecCC---h-----HHHHHHcCCCC--CCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 5667777776 799998776 1 12344555432 247899999999999999999999985
No 37
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.97 E-value=4.6e-31 Score=334.16 Aligned_cols=337 Identities=14% Similarity=0.071 Sum_probs=275.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCC--CcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEE-eCCHHHHHHHHHH
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASR--NHIYGWTAEKAIEKARNEVAQLIYADP-REIIW-TSGATESNNLAIK 76 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~--~~~~~~~~~~~~~~~r~~lA~~~g~~~-~~Iv~-t~g~T~al~~~~~ 76 (2602)
||.++++|.|+.|++++.+++...++|+.+. .+..+..+...++++|+.+++++|+++ .+|+| ++|+|+++++++.
T Consensus 16 ~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~ 95 (377)
T 3e77_A 16 ENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPL 95 (377)
T ss_dssp CCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHH
T ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHH
Confidence 6888888999999999999998777776542 134466778899999999999999965 47888 5899999999999
Q ss_pred hcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHH
Q psy15216 77 GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPIL 156 (2602)
Q Consensus 77 ~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~ 156 (2602)
++.. .++||+|++...++.+. .+.+.+++.|+.++.++.++++..++++++.+++++|++|+++|.+|.||+++|+
T Consensus 96 ~l~~--~~~Gd~v~~~~~g~~~~-~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi- 171 (377)
T 3e77_A 96 NLIG--LKAGRCADYVVTGAWSA-KAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF- 171 (377)
T ss_dssp HHGG--GSTTCEEEECCCSHHHH-HHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-
T ss_pred hccC--CCCCCeEEEEECCHHHH-HHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCccEEEEeCccCchheEchh-
Confidence 9871 12489999888888774 5666777889888888887777788888888899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCC-----ccccc
Q psy15216 157 EIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGG-----HEYGL 231 (2602)
Q Consensus 157 ~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~-----~~~~~ 231 (2602)
+|+++|+++++|++|++|..|+|+++++ ++++|.||++||+|+|++++++++.+.+.|...... .+...
T Consensus 172 ----i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~ 245 (377)
T 3e77_A 172 ----IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSS 245 (377)
T ss_dssp ----CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTT
T ss_pred ----hhccCCCEEEEEcccccCCCCCchhhcC--EEEEecccccCCCccEEEEEcHHHHhhccCCCCchhhHHHHhhcCC
Confidence 4788999999999999999999999886 588999998899999999999999887765332211 12234
Q ss_pred cccCcchhHHHHHHHHHHHHH-H-hHHHHHHHHHHHHHHHHHHHhhccCceEEeC-CCCCCCCceEEEEEcccCh-----
Q psy15216 232 RSGTLATHQIVGMGEAFRLAR-I-EMKEELKRILFLQKRLYNGLMESIEEIYING-DMNNRIPHNLNISFNFIEG----- 303 (2602)
Q Consensus 232 ~~gt~~~~~~~al~~al~~~~-~-~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~-~~~~~~~~~~~~~~~~~~~----- 303 (2602)
..+||++..++++.+|+++.. . +++++.++.+++++++++.|.+ ++|+.+.. ++..+.+.++.|.+++.++
T Consensus 246 ~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~-~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~ 324 (377)
T 3e77_A 246 LYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDN-SQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALE 324 (377)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT-STTSEECCSCGGGBCSSEEEEEESSTTCCHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh-cCCceecCCCHHHcCCcEEEEEcCCCCCchhHH
Confidence 578999999999999999665 4 6899999999999999999988 78888643 2344556667888887543
Q ss_pred hHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 304 ESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 304 ~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..++..+ +||.+++|... .+.+|+|++.++|.+||++++++|++.
T Consensus 325 ~~~l~~l~~~Gi~~~~g~~~---------------------~g~iRiS~~~~~t~edId~l~~al~~~ 371 (377)
T 3e77_A 325 KRFLDKALELNMLSLKGHRS---------------------VGGIRASLYNAVTIEDVQKLAAFMKKF 371 (377)
T ss_dssp HHHHHHHHHTTEESCBCCTT---------------------TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEeCCCCc---------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 2455554 78988766421 156999999999999999999999964
No 38
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.97 E-value=7.1e-30 Score=337.16 Aligned_cols=357 Identities=25% Similarity=0.363 Sum_probs=286.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~-~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
||++..++.|+.+.+++.+.+.....+|+.+.+.++.......+++++++++++|. +++++++++|+|+|+++++.++.
T Consensus 32 l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~ 111 (420)
T 1t3i_A 32 LDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWG 111 (420)
T ss_dssp CBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTH
T ss_pred ecCCccCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhh
Confidence 57777788899999999999987666776544555544467789999999999999 77899999999999999999981
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHH-HHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHH
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I 158 (2602)
...+++||+|+++.++|++....+.. ++..|++++.++.++++.+|++++++++++++++|++++++||||.++|+++|
T Consensus 112 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i 191 (420)
T 1t3i_A 112 MNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEI 191 (420)
T ss_dssp HHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHH
T ss_pred hcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCHHHH
Confidence 00027999999999999997544432 23459999999998888899999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCc-----------
Q psy15216 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGH----------- 227 (2602)
Q Consensus 159 ~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~----------- 227 (2602)
.++|++||+++|+|++|+.+..++++..+++|++++|+||++|++|+|++++++++++.+.+...+|+.
T Consensus 192 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (420)
T 1t3i_A 192 AQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTT 271 (420)
T ss_dssp HHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEE
T ss_pred HHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhcCCCceEEEEEchHHHhhcCceecCCCccccccccccCC
Confidence 999999999999999999988776666677899999999999999999999998887777766554432
Q ss_pred ---cccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCC--CCCceEEEEEccc
Q psy15216 228 ---EYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN--RIPHNLNISFNFI 301 (2602)
Q Consensus 228 ---~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~--~~~~~~~~~~~~~ 301 (2602)
+.++..+++++.+.+++.+++++.. .++++..++..++++++.+.|.+ ++++++..+... ....++.+.++..
T Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 350 (420)
T 1t3i_A 272 GELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQ-IPQLRLYGPNPKHGDRAALASFNVAGL 350 (420)
T ss_dssp CCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-CTTEEEESCCGGGSCBCSEEEEEETTB
T ss_pred CCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeCCCccccccCCEEEEEECCC
Confidence 2335567888888888877888654 35788999999999999999988 679988765421 1134555566655
Q ss_pred ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 302 EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 302 ~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+..++.+.| +||.++++..|..+ .+..+|. .+++||+++.+++++|+++++++|++.
T Consensus 351 ~~~~~~~~l~~~gi~v~~~~~~~~~------~~~~~g~-----~~~iRis~~~~~~~~~i~~~~~~l~~~ 409 (420)
T 1t3i_A 351 HASDVATMVDQDGIAIRSGHHCTQP------LHRLFDA-----SGSARASLYFYNTKEEIDLFLQSLQAT 409 (420)
T ss_dssp CHHHHHHHHHTTTEECBCSCTTCHH------HHHHTTC-----CCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCeEEeeccccchH------HHHhcCC-----CCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence 566777666 79999998776431 2233443 378999999999999999999999964
No 39
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.97 E-value=1.1e-29 Score=333.65 Aligned_cols=358 Identities=22% Similarity=0.324 Sum_probs=288.4
Q ss_pred eeeeccCC-CCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHHHH
Q psy15216 1394 TNIVFKDA-TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAI 1471 (2602)
Q Consensus 1394 ~~v~L~~~-~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~-~~~~iv~t~gaT~al~~al 1471 (2602)
..++|+.+ ..+.++.+.+++.+.+...+++|+.+.+..++.......++|++++++++. ++++|++|+|+|+|++.++
T Consensus 23 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~ 102 (406)
T 1kmj_A 23 PLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVA 102 (406)
T ss_dssp ECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHH
T ss_pred ceEEecCCccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHH
Confidence 35677643 346788999999999988777887655666667778899999999999998 6789999999999999999
Q ss_pred HhhhhhhccCCCEEEEcCCCCcchHHHHHH-HHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccC
Q psy15216 1472 KGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP 1550 (2602)
Q Consensus 1472 ~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~ 1550 (2602)
.++....+++||+|+++.++|++....+.. +...|++++.++.++++.+|+++|++++++++++|++++++||||.++|
T Consensus 103 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~ 182 (406)
T 1kmj_A 103 NSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENP 182 (406)
T ss_dssp HHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCC
T ss_pred HHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccCCeEEEEeCCCccccCcCC
Confidence 998211127999999999999997655433 3445999999999888889999999999999999999999999999999
Q ss_pred hHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccccCCc-------
Q psy15216 1551 ILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGH------- 1623 (2602)
Q Consensus 1551 l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~------- 1623 (2602)
+++|.++|++||+++|+|++|+.|..++++..+++|++++|+||.+||+|+|++++++++++.+.+...+|..
T Consensus 183 l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (406)
T 1kmj_A 183 LAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLS 262 (406)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHCCCSSCSTTSEEEEETT
T ss_pred HHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhccCCCCcEEEEEeHHHHhhcCCcccCCCceeecccc
Confidence 9999999999999999999999988766665667899999999988999999999998877766665544431
Q ss_pred --------cccCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEE
Q psy15216 1624 --------EYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF 1694 (2602)
Q Consensus 1624 --------~~~~~~gt~~~~~~~al~~aL~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~ 1694 (2602)
+..+..|++++.+++++.+++++.. .+++...++..++++++.+.|.+ ++++.+..+. . ...+..+.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~-~-~~~~~~~~~ 339 (406)
T 1kmj_A 263 EGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLES-VPDLTLYGPQ-N-RLGVIAFNL 339 (406)
T ss_dssp TEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT-STTEEEESCT-T-CCSEEEEEE
T ss_pred cccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCC-C-cCCEEEEEE
Confidence 1245678889999988888888655 46788899999999999999988 7789887653 1 234444555
Q ss_pred ecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1695 NFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1695 ~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+..+..++...| +||.+++|..|..+ ....++. .+++||+++.++|.+|+++++++|++.
T Consensus 340 ~~~~~~~~~~~l~~~gi~v~~g~~~~~~------~~~~~g~-----~~~iRis~~~~~t~~~i~~~~~~l~~~ 401 (406)
T 1kmj_A 340 GKHHAYDVGSFLDNYGIAVRTGHHCAMP------LMAYYNV-----PAMCRASLAMYNTHEEVDRLVTGLQRI 401 (406)
T ss_dssp TTCCHHHHHHHHHHTTEECEEECTTCHH------HHHHTTC-----SCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhhCCcEEEeccccchH------HHHhcCC-----CCeEEEEeecCCCHHHHHHHHHHHHHH
Confidence 544556666666 79999998876532 1222333 279999999999999999999999973
No 40
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.97 E-value=7.5e-30 Score=337.98 Aligned_cols=366 Identities=34% Similarity=0.551 Sum_probs=291.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||+++++++|+.+++++.+.+...+.+|+. .|..+....+..+++|+++++++|+++++|++|+|+|+|+++++.++..
T Consensus 22 Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~ 100 (432)
T 3a9z_A 22 MDYNATTPLEPEVIQAVTEAMKEAWGNPSS-SYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVR 100 (432)
T ss_dssp CBTTTCCCCCHHHHHHHHHHHHHCCSCTTC-SSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHH
T ss_pred eeCCccCCCCHHHHHHHHHHHHHhcCCCcc-CcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHh
Confidence 788898899999999999998877778874 4555666677889999999999999888999999999999999998741
Q ss_pred ccc----cCCC-------------EEEEcCCCCcccHHHHHHH-HhCCcEEEEeccCC-CCccChHHHHhhccCCceEEE
Q psy15216 81 FYK----KRGK-------------HIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVS 141 (2602)
Q Consensus 81 ~~~----~~gd-------------~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~-~~~ld~e~l~~~i~~~tklv~ 141 (2602)
.++ ++|| +|+++..+|+++..++..+ +..|++++.++.++ ++.+|+++|++++++++++|+
T Consensus 101 ~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~ 180 (432)
T 3a9z_A 101 CFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVT 180 (432)
T ss_dssp HHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEE
T ss_pred hhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCceEEE
Confidence 111 3775 5556666666666666655 45699999999876 778999999999999999999
Q ss_pred EecccCcccccccHHHHHHHHHhcC----------CEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEe
Q psy15216 142 VMLVNNEIGVIQPILEIGELCRSKG----------VIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIR 211 (2602)
Q Consensus 142 i~~~~npTG~~~~l~~I~~la~~~g----------~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~ 211 (2602)
+++++||||.++|+++|.++|+++| +++|+|++|+.+..++++...++|++++|+||++||. +|+++++
T Consensus 181 ~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~~~~s~~K~~g~~-~G~~~~~ 259 (432)
T 3a9z_A 181 IMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVR 259 (432)
T ss_dssp CCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSEEEEEGGGTTCCS-CEEEEET
T ss_pred EECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhcCCCEEEEehhHhcCCc-ceEEEEc
Confidence 9999999999999999999999999 9999999999888777766667899999999999987 9999999
Q ss_pred cCC-CCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCce--EEeCCC--
Q psy15216 212 RNP-RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEI--YINGDM-- 286 (2602)
Q Consensus 212 ~~~-~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~--~l~~~~-- 286 (2602)
++. ...+.+.+.+++....+..++++...++++.+++++...++++..++..++++++.+.|.+ ++++ .+..+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~ 338 (432)
T 3a9z_A 260 GVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEA-EFGKRIHLNSRFPG 338 (432)
T ss_dssp TBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHGGGEEESSCCTT
T ss_pred cccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh-ccCCcEEEeCCCCc
Confidence 876 5567776666665566778899999999998899876667889999999999999999987 4443 333431
Q ss_pred CCCCCceEEEEEcc--cChhHHHHHhCCeEEcccccCCCCC-CChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHH
Q psy15216 287 NNRIPHNLNISFNF--IEGESLLMAIKDIAVSSGSACTSAS-LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTI 363 (2602)
Q Consensus 287 ~~~~~~~~~~~~~~--~~~~~~~~~L~gI~v~~g~~~~~~~-~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li 363 (2602)
....+..+.|.++. .+...+...+.++.++.|..|.+.. ..+...+..+|+......++|||+++.++|++|+++++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~ 418 (432)
T 3a9z_A 339 VERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIV 418 (432)
T ss_dssp CCBCTTEEEEEECSTTCCHHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHH
T ss_pred ccCCCCEEEEEeCCCCCcHHHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHH
Confidence 12345566677764 2456677777899999998886531 12234555667643333589999999999999999999
Q ss_pred HHHHhh
Q psy15216 364 KLLKMK 369 (2602)
Q Consensus 364 ~~L~~~ 369 (2602)
++|++.
T Consensus 419 ~~l~~~ 424 (432)
T 3a9z_A 419 QDLKQA 424 (432)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999964
No 41
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2e-29 Score=331.08 Aligned_cols=355 Identities=17% Similarity=0.234 Sum_probs=284.6
Q ss_pred eeeccC-CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHh
Q psy15216 1395 NIVFKD-ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKG 1473 (2602)
Q Consensus 1395 ~v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~ 1473 (2602)
.++|+. ...+.++.+.+++.+.+...+.+|+. .|.++........++|+++++++|+++++|++|+|+|+++.+++.+
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~ 105 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTVSTAFRRSGASTVG-AHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEA 105 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHHHHHHHHCCSSSCS-SSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHH
T ss_pred eEEEeCCCcCCCCHHHHHHHHHHHHhcCCCCCC-ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHH
Confidence 567763 34578899999999999876667753 5666666778899999999999999888999999999999999988
Q ss_pred hhhhhccCCCEEEEcCCCCcchHHHHHHH-HhCCcEEEEeccC-CCCCcChhHHHhhccCCceEEEEeccccccccccCh
Q psy15216 1474 AAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI 1551 (2602)
Q Consensus 1474 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~~~-~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l 1551 (2602)
+.. .+++||+|+++.++|+++...+..+ ...|++++.++.+ .++.+|+++|+++++++|++|++++++||||.+.|+
T Consensus 106 l~~-~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l 184 (406)
T 3cai_A 106 SSS-RAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDL 184 (406)
T ss_dssp TGG-GGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCC
T ss_pred Hhh-ccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCH
Confidence 721 1379999999999999987777654 3349999999988 678899999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceE-EEEEecCCCCcccccc--ccCCccccCC
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIG-ALYIRRNPRTRIEAQI--HGGGHEYGLR 1628 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G-~l~~~~~~~~~l~~~~--~g~~~~~~~~ 1628 (2602)
++|.++|++||+++|+|++|+.|..++++..+++|++++|+||++||. +| ++++++++++.+.+.. +++..+.++.
T Consensus 185 ~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~g~~-~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 263 (406)
T 3cai_A 185 RAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPSVMNSFGSVSTNPYATGPARLE 263 (406)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGTSCS-CEEEEESCHHHHHTSCCCCSCTTCCGGGGGC
T ss_pred HHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhcCCC-cCeEEEEehHHHhhcCCcccCCCCCcccccc
Confidence 999999999999999999999988777766667999999999988876 78 9999987666665542 2333344566
Q ss_pred CCCcchhHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEE
Q psy15216 1629 SGTLATHQIVGMGEAFRLARI---------------EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNIS 1693 (2602)
Q Consensus 1629 ~gt~~~~~~~al~~aL~~~~~---------------~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~ 1693 (2602)
.++++..++.++.+++++... ++++..++..++++++.+.|.+ ++++.+..+.....+ ...+.
T Consensus 264 ~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~-~~~~~ 341 (406)
T 3cai_A 264 IGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRS-LPLVMLIGRPEAQIP-VVSFA 341 (406)
T ss_dssp CSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CTTEEECCCCSSBCS-EEEEE
T ss_pred CCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhc-CCCeEEcCCccccCC-EEEEE
Confidence 789999999888888886553 4788899999999999999988 788888755433333 45555
Q ss_pred EecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1694 FNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1694 ~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
++..+..++...| +||.+++|.. .+....+|... ..+++|++++.++|.+|+++++++|++
T Consensus 342 ~~~~~~~~~~~~L~~~gi~v~~g~~--------~~~~~~~g~~~--~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 342 VHKVPADRVVQRLADNGILAIANTG--------SRVLDVLGVND--VGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp ETTBCHHHHHHHHHHTTEECEECCS--------CHHHHHHTTTT--TTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred ECCcCHHHHHHHHHHCCcEEecCCh--------HHHHHHcCCCC--CCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 6555566676666 7999987761 12333444331 237899999999999999999999985
No 42
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.97 E-value=5.4e-31 Score=336.07 Aligned_cols=332 Identities=12% Similarity=0.073 Sum_probs=252.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCC--CcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEE-eCCHHHHHHHHHH
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASR--NHIYGWTAEKAIEKARNEVAQLIYADP-REIIW-TSGATESNNLAIK 76 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~--~~~~~~~~~~~~~~~r~~lA~~~g~~~-~~Iv~-t~g~T~al~~~~~ 76 (2602)
||++++++.|+.|++++.+++...++||.+. .+..+..+...++++|+.+++++|+++ .+|+| |+|+|+++++++.
T Consensus 30 l~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~ 109 (386)
T 3qm2_A 30 NFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPL 109 (386)
T ss_dssp ECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHH
T ss_pred cccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHH
Confidence 6899999999999999999887767776541 123355667789999999999999954 47888 6999999999999
Q ss_pred hcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccC--CCCc-cChHHHHhhccCCceEEEEecccCccccc-
Q psy15216 77 GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGL-ITLSQLEEKICSDTILVSVMLVNNEIGVI- 152 (2602)
Q Consensus 77 ~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~-ld~e~l~~~i~~~tklv~i~~~~npTG~~- 152 (2602)
++. ++||+|++...++.+. .+...+++.| ++..++++ ..|. +++++++.+++++|++|+++|.+|.||++
T Consensus 110 ~l~----~~gd~v~~~~~~~~~~-~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i 183 (386)
T 3qm2_A 110 NLL----GDKTTADYVDAGYWAA-SAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAI 183 (386)
T ss_dssp HHC----TTCCEEEEEESSHHHH-HHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEEC
T ss_pred hcc----CCCCeEEEEeCCHHHH-HHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEec
Confidence 987 7899987766666664 4555567778 89999987 5564 88999999999999999999999999996
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCC-----Cc
Q psy15216 153 QPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGG-----GH 227 (2602)
Q Consensus 153 ~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~-----~~ 227 (2602)
.|+++|. +|+++++|++|++|..|+|+++++ ++++|+||++||+|+|+||+++++.+.+.|..... ..
T Consensus 184 ~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~~--~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~ 256 (386)
T 3qm2_A 184 DETPDFG-----PEVVVTADFSSTILSAPLDVSRYG--VIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLN 256 (386)
T ss_dssp CCCCCCC-----TTCCEEEECTTTTTSSCCCGGGCS--EEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGGGCHHHHH
T ss_pred Cchhhhc-----CCCEEEEEcccccCCCCCCccccC--EEEEecccccCCCccEEEEECHHHHhhhcccCCcHHHHHHHh
Confidence 8999885 799999999999999999999885 67799999889999999999999887776533211 12
Q ss_pred cccccccCcchhHHHHHHHHHHHHH-H-hHHHHHHHHHHHHHHHHHHHhhccCce-EEeCCCCCCCCceEEEEEcc--cC
Q psy15216 228 EYGLRSGTLATHQIVGMGEAFRLAR-I-EMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHNLNISFNF--IE 302 (2602)
Q Consensus 228 ~~~~~~gt~~~~~~~al~~al~~~~-~-~~~~~~~~~~~l~~~l~~~L~~~~~g~-~l~~~~~~~~~~~~~~~~~~--~~ 302 (2602)
+...+++|||+++++++.+|+++.. . +++++.++..++++++++.|.+ + ++ ....++..+.+.++.|.++. .+
T Consensus 257 ~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~-~-~~~~~~~~~~~rs~~iv~f~~~~~~~~ 334 (386)
T 3qm2_A 257 DNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDN-S-DFYRNDVAQANRSRMNVPFQLADNTLD 334 (386)
T ss_dssp HC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT-C-SSEECCBCGGGBCSSEEEEEESSGGGH
T ss_pred hcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-C-CCcccCCCHHHcCceEEEEECCCcccc
Confidence 3345678999999999999999665 4 6999999999999999999987 4 44 33333445566778888874 33
Q ss_pred hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 303 GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 303 ~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..++..| +||.++.|..|. +.+|+|++.++|.+||++++++|++.
T Consensus 335 -~~~~~~L~~~gI~~~~g~~~~---------------------~~iRiS~~~~~t~edId~l~~~l~~~ 381 (386)
T 3qm2_A 335 -KVFLEESFAAGLHALKGHRVV---------------------GGMRASIYNAMPIEGVKALTDFMIDF 381 (386)
T ss_dssp -HHHHHHHHHTTEECCBCCTTT---------------------CSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHCCCEEeCCCCCc---------------------CeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 4566656 799988776542 45999999999999999999999964
No 43
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.97 E-value=1.3e-29 Score=320.79 Aligned_cols=332 Identities=14% Similarity=0.077 Sum_probs=270.1
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCc--cchhHHHHHHHHHHHHHHHHHHhCCCC-CcEEE-eCCHHHHHHHHHHhhhh
Q psy15216 1401 ATTPIDPRVVDKMIPYLRVQFGNPASR--NHIYGWTAEKAIEKARNEVAQLIYADP-REIIW-TSGATESNNLAIKGAAH 1476 (2602)
Q Consensus 1401 ~~~~~~~~v~eal~~~l~~~~~np~~~--~~~~~~~~~~~~~~lr~~ia~~~g~~~-~~iv~-t~gaT~al~~al~~l~~ 1476 (2602)
.+.++|+++++++.+.+.+.++||.+. .+..+..+.+.++++|+.+++++|+++ ++|+| |+|+|+++++++.++..
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~ 99 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIG 99 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGG
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccC
Confidence 346899999999999998777776542 144577888999999999999999964 57888 58999999999999872
Q ss_pred hhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHH
Q psy15216 1477 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 1556 (2602)
Q Consensus 1477 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ 1556 (2602)
.++||+|++...+|.+. .+.+.+++.|..+++++.++++.+++++++.+++++|++|.++|.+|.||+++|+
T Consensus 100 --~~~Gd~v~~~~~g~~~~-~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi----- 171 (377)
T 3e77_A 100 --LKAGRCADYVVTGAWSA-KAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF----- 171 (377)
T ss_dssp --GSTTCEEEECCCSHHHH-HHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-----
T ss_pred --CCCCCeEEEEECCHHHH-HHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCccEEEEeCccCchheEchh-----
Confidence 13499999888888774 4556667779888888887777788888888899999999999999999999998
Q ss_pred HhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccccCC-----ccccCCCCC
Q psy15216 1557 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGG-----HEYGLRSGT 1631 (2602)
Q Consensus 1557 ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~-----~~~~~~~gt 1631 (2602)
+|+++|+++++|++|++|..++|+.+++ ++++|+||++||+|+|++++++++++.+.|...+.. .+...+.+|
T Consensus 172 i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~T 249 (377)
T 3e77_A 172 IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNT 249 (377)
T ss_dssp CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSC
T ss_pred hhccCCCEEEEEcccccCCCCCchhhcC--EEEEecccccCCCccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCC
Confidence 4889999999999999999999999886 588999998899999999999998877765332211 123446789
Q ss_pred cchhHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeC-CCCCCCCceEEEEEecCCc-----HHHH
Q psy15216 1632 LATHQIVGMGEAFRLAR-I-EMKEELKRILFLQKRLYNGLMESIEEIYING-DMNNRIPHNLNISFNFIEG-----ESLL 1703 (2602)
Q Consensus 1632 ~~~~~~~al~~aL~~~~-~-~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~-~~~~~~~~~~~~~~~~~~~-----~~~~ 1703 (2602)
|++..++++.+||+++. . +++.+.++.++++++++++|.+ ++++.+.. .+..+.+..+.|.+++.+. ..++
T Consensus 250 p~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~-~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l 328 (377)
T 3e77_A 250 PPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDN-SQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFL 328 (377)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT-STTSEECCSCGGGBCSSEEEEEESSTTCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh-cCCceecCCCHHHcCCcEEEEEcCCCCCchhHHHHHH
Confidence 99999999999999665 4 6999999999999999999988 78887643 2334556667888886543 2344
Q ss_pred Hhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1704 MAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1704 ~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
..+ +||.+++|... .+.+|+|++.++|.+||++++++|++
T Consensus 329 ~~l~~~Gi~~~~g~~~---------------------~g~iRiS~~~~~t~edId~l~~al~~ 370 (377)
T 3e77_A 329 DKALELNMLSLKGHRS---------------------VGGIRASLYNAVTIEDVQKLAAFMKK 370 (377)
T ss_dssp HHHHHTTEESCBCCTT---------------------TCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEeCCCCc---------------------CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 444 79988766421 15699999999999999999999997
No 44
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.97 E-value=7.9e-29 Score=327.14 Aligned_cols=359 Identities=25% Similarity=0.352 Sum_probs=283.1
Q ss_pred eeeccCC-CCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHHHHH
Q psy15216 1395 NIVFKDA-TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIK 1472 (2602)
Q Consensus 1395 ~v~L~~~-~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~-~~~~iv~t~gaT~al~~al~ 1472 (2602)
.++++.+ ..+.++.+.+++.+.++...++|+.+.+.++........++|++++++++. +++++++|+|+|+|+++++.
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~ 108 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAY 108 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHH
Confidence 5677643 346788999999999987767777545555555567789999999999998 77899999999999999999
Q ss_pred hhhhhhccCCCEEEEcCCCCcchHHHHH-HHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccCh
Q psy15216 1473 GAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI 1551 (2602)
Q Consensus 1473 ~l~~~~~~~gd~Vlv~~~~~~s~~~~~~-~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l 1551 (2602)
++....+++||+|++++++|++....+. .+...|++++.++.+.++.+|++++++++++++++|++++++||||.++|+
T Consensus 109 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l 188 (420)
T 1t3i_A 109 SWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPA 188 (420)
T ss_dssp HTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCH
T ss_pred HhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCH
Confidence 9821112799999999999999654332 223349999999998888899999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccccCCc--------
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGH-------- 1623 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~-------- 1623 (2602)
++|.++|++||+++|+|++|+.|..++++..+++|++++|+||++||.|+|++++++++++.+.+...+|..
T Consensus 189 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (420)
T 1t3i_A 189 EEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDH 268 (420)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHSCCCSCSTTSEEEECSSC
T ss_pred HHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhcCCCceEEEEEchHHHhhcCceecCCCccccccccc
Confidence 999999999999999999999988766666667899999999988999999999998776666655444321
Q ss_pred ------cccCCCCCcchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCC--CCCceEEEEE
Q psy15216 1624 ------EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN--RIPHNLNISF 1694 (2602)
Q Consensus 1624 ------~~~~~~gt~~~~~~~al~~aL~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~--~~~~~~~~~~ 1694 (2602)
+.++..+++++.+++++.++++++.. ++++..+++.++++++.+.|.+ .+++.+..+... ....+..+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~ 347 (420)
T 1t3i_A 269 FTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQ-IPQLRLYGPNPKHGDRAALASFNV 347 (420)
T ss_dssp EEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-CTTEEEESCCGGGSCBCSEEEEEE
T ss_pred cCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeCCCccccccCCEEEEEE
Confidence 23355678888888888778886553 5788899999999999999988 679988765310 1134445555
Q ss_pred ecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1695 NFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1695 ~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+..+..++...| +||.+++|..|..+ ....++. .+++||+++.+++.+|+++++++|++.
T Consensus 348 ~~~~~~~~~~~l~~~gi~v~~~~~~~~~------~~~~~g~-----~~~iRis~~~~~~~~~i~~~~~~l~~~ 409 (420)
T 1t3i_A 348 AGLHASDVATMVDQDGIAIRSGHHCTQP------LHRLFDA-----SGSARASLYFYNTKEEIDLFLQSLQAT 409 (420)
T ss_dssp TTBCHHHHHHHHHTTTEECBCSCTTCHH------HHHHTTC-----CCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCeEEeeccccchH------HHHhcCC-----CCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence 544556666666 79999988766431 1122332 378999999999999999999999973
No 45
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.97 E-value=2.4e-28 Score=323.59 Aligned_cols=370 Identities=33% Similarity=0.531 Sum_probs=289.8
Q ss_pred ceeeeccC-CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q psy15216 1393 YTNIVFKD-ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAI 1471 (2602)
Q Consensus 1393 ~~~v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al 1471 (2602)
...++|+. +..+.++.+++++.+.+...+++|+. .|..+........++|+++++++|+++++|++|+|+|+|+++++
T Consensus 17 ~~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~ 95 (432)
T 3a9z_A 17 NRKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSS-SYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVI 95 (432)
T ss_dssp -CCEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTC-SSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHH
T ss_pred CCcEEeeCCccCCCCHHHHHHHHHHHHHhcCCCcc-CcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHH
Confidence 45678874 34578899999999999877778875 56666667788899999999999998889999999999999999
Q ss_pred Hhhhhhhc----cCCC-------------EEEEcCCCCcchHHHHHHH-HhCCcEEEEeccCC-CCCcChhHHHhhccCC
Q psy15216 1472 KGAAHFYK----KRGK-------------HIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPKN-NGLITLSQLEEKICSD 1532 (2602)
Q Consensus 1472 ~~l~~~~~----~~gd-------------~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~-~~~id~d~l~~~i~~~ 1532 (2602)
.++....+ ++|| +|+++..+|+++..++..+ ...|++++.++.++ ++.+|+++|+++++++
T Consensus 96 ~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~ 175 (432)
T 3a9z_A 96 HSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPT 175 (432)
T ss_dssp HHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTT
T ss_pred HHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCC
Confidence 98852111 3785 5555555566666666554 44599999999876 7789999999999999
Q ss_pred ceEEEEeccccccccccChHHHHHHhhhcC----------CEEEEecccccCcccccCCCCCccEEEEccccccCCCceE
Q psy15216 1533 TILVSVMLVNNEIGVIQPILEIGELCRSKG----------VIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIG 1602 (2602)
Q Consensus 1533 t~lv~l~~~~n~tG~~~~l~~I~~ia~~~g----------i~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G 1602 (2602)
|++|++++++||||.++|+++|.++|++|| +++|+|++|+.|..++++..+++|++++|+||++||+ +|
T Consensus 176 ~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~~~~s~~K~~g~~-~G 254 (432)
T 3a9z_A 176 TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IG 254 (432)
T ss_dssp EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSEEEEEGGGTTCCS-CE
T ss_pred ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhcCCCEEEEehhHhcCCc-ce
Confidence 999999999999999999999999999999 9999999999887776665567899999999988987 99
Q ss_pred EEEEecCC-CCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc--EEEe
Q psy15216 1603 ALYIRRNP-RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEE--IYIN 1679 (2602)
Q Consensus 1603 ~l~~~~~~-~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g--l~i~ 1679 (2602)
+++++++. ...+.+.+.++.....+..++++...++++.+++++...++++..+++.++++++.+.|.+ +++ +.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~ 333 (432)
T 3a9z_A 255 ALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEA-EFGKRIHLN 333 (432)
T ss_dssp EEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHGGGEEES
T ss_pred EEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh-ccCCcEEEe
Confidence 99999876 5567776666665566778899999999998999876667889999999999999999987 434 4444
Q ss_pred CCC--CCCCCceEEEEEecC--CcHHHHHhcCCEEEccccccCCCC-CChhHHHHHcCCCccccCCeEEEecCCCCCHHH
Q psy15216 1680 GDM--NNRIPHNLNISFNFI--EGESLLMAIKDIAVSSGSACTSAS-LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 1754 (2602)
Q Consensus 1680 ~~~--~~~~~~~~~~~~~~~--~~~~~~~~L~gI~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~ed 1754 (2602)
++. ....+....|.++.. +...+...+.++.++.|..|.... ..+...+..+|.......+++|||++.++|.+|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~ee 413 (432)
T 3a9z_A 334 SRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAE 413 (432)
T ss_dssp SCCTTCCBCTTEEEEEECSTTCCHHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHH
T ss_pred CCCCcccCCCCEEEEEeCCCCCcHHHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHH
Confidence 431 223455677777642 455676777899999988775421 012234445565432335899999999999999
Q ss_pred HHHHHHHHHHh
Q psy15216 1755 IDFTIKLLKMK 1765 (2602)
Q Consensus 1755 id~li~~L~~~ 1765 (2602)
+++++++|++.
T Consensus 414 i~~~~~~l~~~ 424 (432)
T 3a9z_A 414 VDLIVQDLKQA 424 (432)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999973
No 46
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.96 E-value=4.9e-28 Score=316.16 Aligned_cols=340 Identities=19% Similarity=0.266 Sum_probs=276.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhc-CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~-~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
||+++.++.|+.+++++.+.+.... .++.. +..........+++++.+++++|+++++|++++|+|+|+++++.++.
T Consensus 20 l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~ 97 (390)
T 1elu_A 20 FNFGGQGILPTVALEAITAMYGYLQENGPFS--IAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLD 97 (390)
T ss_dssp CCTTTCCCCCHHHHHHHHHHHHHHHHHCSSS--HHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSC
T ss_pred ecCCccCCCCHHHHHHHHHHHHHHhccCCcc--hhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCC
Confidence 6788888889999999999887532 12221 11111224678899999999999988899999999999999999983
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHH-HHhCCcEEEEeccC--CCCccChHHHHhhccCCceEEEEecccCcccccccHH
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKPK--NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPIL 156 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~~--~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~ 156 (2602)
+++||+|+++.++|+++...+.. ++..|++++.++.+ .++.+|+++|++++++++++|++++++||||.++|++
T Consensus 98 ---~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~ 174 (390)
T 1elu_A 98 ---WHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLA 174 (390)
T ss_dssp ---CCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHH
T ss_pred ---CCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecCHH
Confidence 27999999999999998776543 34459999999986 5778999999999999999999999999999999999
Q ss_pred HHHHHHH----hcCCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCcccceecCCCc----
Q psy15216 157 EIGELCR----SKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGH---- 227 (2602)
Q Consensus 157 ~I~~la~----~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~---- 227 (2602)
+|.++|+ +||+++|+|++|+.|..++++...++|++++|+|| ++|+.|+|++++++++++.+.+...+|+.
T Consensus 175 ~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~ 254 (390)
T 1elu_A 175 EIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWRSITYG 254 (390)
T ss_dssp HHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTTTEEEC
T ss_pred HHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCCccccCCccccc
Confidence 9999999 99999999999999988888777789999999999 88899999999999988888776555432
Q ss_pred -----------cccccccCcchhHHHHHHHHHHHHHH-h-HHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceE
Q psy15216 228 -----------EYGLRSGTLATHQIVGMGEAFRLARI-E-MKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNL 294 (2602)
Q Consensus 228 -----------~~~~~~gt~~~~~~~al~~al~~~~~-~-~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~ 294 (2602)
..++..++++...+.++.++++.... + +++..++++++++++.+.|.+ +++++++.+.. ....++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~-~~~~~~ 332 (390)
T 1elu_A 255 AKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQ-LPHVHCLATSA-PQAGLV 332 (390)
T ss_dssp TTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-STTEEESCSSC-CSSSEE
T ss_pred ccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEecCcc-ccccEE
Confidence 12455688888888888888885443 3 888999999999999999988 67998876421 123455
Q ss_pred EEEEc-ccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 295 NISFN-FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 295 ~~~~~-~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.+.++ ..+..++.+.| +||.++++. . .+++||+++.+++++|+++++++|++.
T Consensus 333 ~~~~~~~~~~~~~~~~l~~~gi~v~~~~---~-------------------~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 333 SFTVDSPLGHRAIVQKLEEQRIYLRTIA---D-------------------PDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp EEEECSSSCHHHHHHHHHHTTEECEEET---T-------------------TTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred EEEcCCCCCHHHHHHHHHHCCEEEEecC---C-------------------CCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 55564 34566777777 799988764 1 278999999999999999999999853
No 47
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.96 E-value=6.6e-30 Score=326.10 Aligned_cols=333 Identities=12% Similarity=0.081 Sum_probs=249.8
Q ss_pred eeecc-CCCCCCCHHHHHHHHHHHhhccCCCCCc--cchhHHHHHHHHHHHHHHHHHHhCCCC-CcEEE-eCCHHHHHHH
Q psy15216 1395 NIVFK-DATTPIDPRVVDKMIPYLRVQFGNPASR--NHIYGWTAEKAIEKARNEVAQLIYADP-REIIW-TSGATESNNL 1469 (2602)
Q Consensus 1395 ~v~L~-~~~~~~~~~v~eal~~~l~~~~~np~~~--~~~~~~~~~~~~~~lr~~ia~~~g~~~-~~iv~-t~gaT~al~~ 1469 (2602)
.+|++ .++++.|+.+++++.+++.+.++||.+. .+..+..+...++++|+.+++++|+++ ++|+| |+|+|+++++
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ 106 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAG 106 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHH
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHH
Confidence 36775 5778999999999999888777777542 233466677889999999999999954 46888 6999999999
Q ss_pred HHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccC--CCCC-cChhHHHhhccCCceEEEEeccccccc
Q psy15216 1470 AIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGL-ITLSQLEEKICSDTILVSVMLVNNEIG 1546 (2602)
Q Consensus 1470 al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~-id~d~l~~~i~~~t~lv~l~~~~n~tG 1546 (2602)
++.++. ++||++++...++.+. .+...+++.| ++.+++++ .+|. +++++++++++++|++|+++|.+|.||
T Consensus 107 ai~~l~----~~gd~v~~~~~~~~~~-~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG 180 (386)
T 3qm2_A 107 VPLNLL----GDKTTADYVDAGYWAA-SAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDG 180 (386)
T ss_dssp HHHHHC----TTCCEEEEEESSHHHH-HHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTT
T ss_pred HHHhcc----CCCCeEEEEeCCHHHH-HHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcC
Confidence 999986 7899988777667664 3445556668 89999988 5565 888999999999999999999999999
Q ss_pred cc-cChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccc-----c
Q psy15216 1547 VI-QPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIH-----G 1620 (2602)
Q Consensus 1547 ~~-~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~-----g 1620 (2602)
++ .|+++|. +|+++++|++|++|..|+|+.+++ ++++|+||++||+|+|++++++++.+.+.+... +
T Consensus 181 ~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~~--~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~~~~~ 253 (386)
T 3qm2_A 181 IAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRYG--VIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYT 253 (386)
T ss_dssp EECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGCS--EEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGGGCHH
T ss_pred EecCchhhhc-----CCCEEEEEcccccCCCCCCccccC--EEEEecccccCCCccEEEEECHHHHhhhcccCCcHHHHH
Confidence 96 8999885 799999999999999999999885 577999998899999999999998877665322 1
Q ss_pred CCccccCCCCCcchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCcE-EEeCCCCCCCCceEEEEEec-
Q psy15216 1621 GGHEYGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHNLNISFNF- 1696 (2602)
Q Consensus 1621 ~~~~~~~~~gt~~~~~~~al~~aL~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~gl-~i~~~~~~~~~~~~~~~~~~- 1696 (2602)
...+.+.+.+|++++.++++.+|++++.. +++++.++..+++++++++|.+ + ++ ....++..+.+..+.|.++.
T Consensus 254 ~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~-~-~~~~~~~~~~~rs~~iv~f~~~~~ 331 (386)
T 3qm2_A 254 VLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDN-S-DFYRNDVAQANRSRMNVPFQLADN 331 (386)
T ss_dssp HHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT-C-SSEECCBCGGGBCSSEEEEEESSG
T ss_pred HHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-C-CCcccCCCHHHcCceEEEEECCCc
Confidence 12234556789999999999999996654 6999999999999999999987 4 44 33223344566777888874
Q ss_pred -CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1697 -IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1697 -~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.+ ..+...| +||.++.|..+. +.+|+|++.+||.+|||+++++|++
T Consensus 332 ~~~-~~~~~~L~~~gI~~~~g~~~~---------------------~~iRiS~~~~~t~edId~l~~~l~~ 380 (386)
T 3qm2_A 332 TLD-KVFLEESFAAGLHALKGHRVV---------------------GGMRASIYNAMPIEGVKALTDFMID 380 (386)
T ss_dssp GGH-HHHHHHHHHTTEECCBCCTTT---------------------CSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ccc-HHHHHHHHHCCCEEeCCCCCc---------------------CeEEEEcCCCCCHHHHHHHHHHHHH
Confidence 23 4555555 799988776542 4599999999999999999999997
No 48
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.96 E-value=2.2e-28 Score=314.65 Aligned_cols=326 Identities=12% Similarity=0.080 Sum_probs=265.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
|.+++.+++|+.+++++.+.+.. + .++......+++|+++++++|++++++++|+|+|+|+++++.++.
T Consensus 4 l~~~~p~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~- 72 (352)
T 1iug_A 4 LLTPGPVRLHPKALEALARPQLH-----H-----RTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLF- 72 (352)
T ss_dssp ECSSSSCCCCHHHHHHHHSCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHC-
T ss_pred cccCCCCCCCHHHHHHhccCCCC-----c-----cCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhcc-
Confidence 35677789999999998876531 1 233445678899999999999988899999999999999999987
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~ 160 (2602)
++||+|+++.++|+++. ....++..|++++.++.++++.+|++++++ +++++|++++++||||.+.|+++|.+
T Consensus 73 ---~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~l~~i~~ 145 (352)
T 1iug_A 73 ---APGERVLVPVYGKFSER-FYEIALEAGLVVERLDYPYGDTPRPEDVAK---EGYAGLLLVHSETSTGALADLPALAR 145 (352)
T ss_dssp ---CTTCEEEEEECSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCTTTSCC---SSCSEEEEESEETTTTEECCHHHHHH
T ss_pred ---CCCCeEEEEeCCchhHH-HHHHHHHcCCceEEEeCCCCCCCCHHHHhc---cCCcEEEEEEecCCcceecCHHHHHH
Confidence 79999999999999986 555556679999999998888899999987 68999999999999999999999999
Q ss_pred HHHhc--CCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCcccceecCCC---------cc
Q psy15216 161 LCRSK--GVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGG---------HE 228 (2602)
Q Consensus 161 la~~~--g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~~~g~~---------~~ 228 (2602)
+|++| |+++|+|++|+++..++++..+++|++++|+|| ++||.|+|+++++++.++.+.+ .++. ..
T Consensus 146 l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 223 (352)
T 1iug_A 146 AFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKP--RGYYLDLARELKAQK 223 (352)
T ss_dssp HHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCC--CSSTTCHHHHHHHHT
T ss_pred HHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhC--CCceeeHHHHHhhcc
Confidence 99999 999999999998888777766778999999999 8889999999999876655433 0100 11
Q ss_pred ccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc-ccChhHHH
Q psy15216 229 YGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGESLL 307 (2602)
Q Consensus 229 ~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~-~~~~~~~~ 307 (2602)
.....++++...+.++.++++.....+++..++++++++++.+.|.+ + ++++..+. ..+.++.+.++ ..+..++.
T Consensus 224 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 299 (352)
T 1iug_A 224 EGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEE-G-GLRPVPKR--FSPAVAAFYLPEGVPYARVK 299 (352)
T ss_dssp TTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHH-T-TCEESCSS--BCTTCEEEECCTTCCHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccccc--cCCeEEEEEcCCCCCHHHHH
Confidence 23446788888888888899865555788999999999999999988 5 88877543 23455666665 45667777
Q ss_pred HHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 308 MAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 308 ~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+.| +||.++++..+. ..+++||+++.+++++|+++++++|++.
T Consensus 300 ~~l~~~gi~v~~~~~~~-------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 344 (352)
T 1iug_A 300 EAFAQRGAVIAGGQGPL-------------------KGKVFRLSLMGAYDRYEALGVAGMFREV 344 (352)
T ss_dssp HHHHTTTEECEECCGGG-------------------TTTEEEECCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEEeCCCcc-------------------CCCEEEEEccccCCHHHHHHHHHHHHHH
Confidence 777 799998776321 1378999999999999999999999864
No 49
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=6.1e-29 Score=314.24 Aligned_cols=327 Identities=13% Similarity=0.043 Sum_probs=256.6
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhcCCCCCCCc---chhhhHHHHHHHHHHHHHHHhCCC-CCcEEE-eCCHHHHHHHHHHh
Q psy15216 3 YSATTPIDPRVVDKMIPYLRVQFGNPASRNH---IYGWTAEKAIEKARNEVAQLIYAD-PREIIW-TSGATESNNLAIKG 77 (2602)
Q Consensus 3 ~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~---~~~~~~~~~~~~~r~~lA~~~g~~-~~~Iv~-t~g~T~al~~~~~~ 77 (2602)
++++++.|+.|++++.+++...++||.+ .+ ..+..+...++++|+.+++++|++ +.+|+| |+|+|+++++++.+
T Consensus 10 ~pgpt~~~~~V~~a~~~~~~~~~~~~~s-~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~ 88 (361)
T 3m5u_A 10 SAGPSTLPLEILEQAQKELCDYQGRGYS-IMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMN 88 (361)
T ss_dssp CSSSCCCCHHHHHHHHHTSSSGGGSSSC-GGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHhcccCCce-eeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHh
Confidence 4678899999999999998877777654 22 235567789999999999999996 457888 99999999999998
Q ss_pred cccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCc--cChHHHHhhccCCceEEEEecccCcccccccH
Q psy15216 78 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGL--ITLSQLEEKICSDTILVSVMLVNNEIGVIQPI 155 (2602)
Q Consensus 78 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~--ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l 155 (2602)
+. +||++++....+.+. .+...+++.|+++..+++++++. ++++. + |+++|++|+++|.+|.||+++|.
T Consensus 89 ~~-----~~~~~~~i~~~~~~~-~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~~~~e~~tG~~~~~ 159 (361)
T 3m5u_A 89 LA-----LNGVCEYANTGVWTK-KAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYICSNNTIYGTQYQN 159 (361)
T ss_dssp HC-----CSSCEEEEECSHHHH-HHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEEESEETTTTEECSS
T ss_pred cC-----CCCeEEEEeCCHHHH-HHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEEeCCCCCcceeCCc
Confidence 86 566542211122232 34455677899999999988774 56776 4 89999999999999999999873
Q ss_pred HHHHHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccc----eecCCCc--cc
Q psy15216 156 LEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEA----QIHGGGH--EY 229 (2602)
Q Consensus 156 ~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~----~~~g~~~--~~ 229 (2602)
+++ +|+++++|++|++|..|+|+++ .|++++|+||++||+|+|++++++++.+.+.| .+..+.. +.
T Consensus 160 -----i~~-~~~~~~vD~~q~~g~~~id~~~--~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~ 231 (361)
T 3m5u_A 160 -----YPK-TKTPLIVDASSDFFSRKVDFSN--IALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAEN 231 (361)
T ss_dssp -----CCC-CSSCEEEECGGGTTSSCCCCTT--EEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHT
T ss_pred -----ccc-cCCEEEEEcccccCCCCCCccc--CCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCceeehHHHhhc
Confidence 444 4999999999999999999985 58999999998899999999999988766554 2211111 23
Q ss_pred cccccCcchhHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhhccCce-EEeCCCCCCCCceEEEEEcc-cCh-h
Q psy15216 230 GLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHNLNISFNF-IEG-E 304 (2602)
Q Consensus 230 ~~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~g~-~l~~~~~~~~~~~~~~~~~~-~~~-~ 304 (2602)
....+||++.+++++.+|+++..+ +++++.++..++++++++.|.+ ++++ .++.++..+.+.++.|.++. ... .
T Consensus 232 ~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~-~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~ 310 (361)
T 3m5u_A 232 QSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL-SNGFYKGHADKKDRSLMNVSFNIAKNKDLEP 310 (361)
T ss_dssp TTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT-STTSEEESSCGGGBCSSEEEEEESSCTTHHH
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH-CCCeeeccCCHHHcCCeEEEEECCCchhhhH
Confidence 445689999999999999997664 5999999999999999999988 6765 66555555566777888875 121 3
Q ss_pred HHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 305 SLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 305 ~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+++..| +||.++.|..+. +.+|+|++.|+|.+||++++++|++.
T Consensus 311 ~~~~~L~~~gI~~~~g~~~~---------------------g~iRiS~~~~~t~edId~l~~al~~~ 356 (361)
T 3m5u_A 311 LFVKEAEEAGMIGLKGHRIL---------------------GGIRASIYNALNLDQVKTLCEFMKEF 356 (361)
T ss_dssp HHHHHHHHTTEECCBCCTTT---------------------CSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEecCCCcc---------------------CeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 566665 799987765431 45999999999999999999999964
No 50
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.96 E-value=1.5e-28 Score=321.17 Aligned_cols=333 Identities=14% Similarity=0.111 Sum_probs=267.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||+++.+++|+.+++++.+.+.. + .++......+++|+++++++|++++++++|+|+|+|+++++.++.
T Consensus 12 l~~~~~~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~- 80 (392)
T 2z9v_A 12 TLTAGPVNAYPEVLRGLGRTVLY-----D-----YDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLI- 80 (392)
T ss_dssp ECSSSCCCCCHHHHHHTTSCCCC-----T-----TSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHC-
T ss_pred eecCCCcCCCHHHHHHHhccccc-----c-----ccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhc-
Confidence 68888889999999988776532 1 123455678899999999999988899999999999999999986
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhc--cCCceEEEEecccCcccccccHHHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKI--CSDTILVSVMLVNNEIGVIQPILEI 158 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i--~~~tklv~i~~~~npTG~~~~l~~I 158 (2602)
++||+|+++.++|+++. +...++..|++++.+++++++.+|+++|++++ ++++++|++++++||||.++|+++|
T Consensus 81 ---~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i 156 (392)
T 2z9v_A 81 ---SPDDVVLNLASGVYGKG-FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAI 156 (392)
T ss_dssp ---CTTCCEEEEESSHHHHH-HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHH
T ss_pred ---CCCCEEEEecCCcccHH-HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHH
Confidence 79999999999999874 44444556999999999888889999999999 4689999999999999999999999
Q ss_pred HHHHHhcCCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCccccee-------cCC-----
Q psy15216 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQI-------HGG----- 225 (2602)
Q Consensus 159 ~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~~-------~g~----- 225 (2602)
.++|++||+++|+|++|+.|..++++..+++|++++|+|| ++|++|+|++++++++++.+.+.. .++
T Consensus 157 ~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~ 236 (392)
T 2z9v_A 157 GALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWEN 236 (392)
T ss_dssp HHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTT
T ss_pred HHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccHHHHHh
Confidence 9999999999999999999888777777788999999999 778999999999988766664422 110
Q ss_pred -CccccccccCcchhHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHhhccCceEEeCCCC-CCCCceEEEEEc-cc
Q psy15216 226 -GHEYGLRSGTLATHQIVGMGEAFRLARIE-MKEELKRILFLQKRLYNGLMESIEEIYINGDMN-NRIPHNLNISFN-FI 301 (2602)
Q Consensus 226 -~~~~~~~~gt~~~~~~~al~~al~~~~~~-~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~-~~~~~~~~~~~~-~~ 301 (2602)
.....+..++++..+++++.++++..... +++..+++.++++++.+.|.+ + ++.+..++. ...+.++.+.++ ..
T Consensus 237 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~ 314 (392)
T 2z9v_A 237 AWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTA-M-GLSVWAASDSIASPTTTAVRTPDGV 314 (392)
T ss_dssp TTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSSSGGGBCTTEEEEECCTTC
T ss_pred hhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCCccccCCceEEEECCCCC
Confidence 01233456888999888888888865444 788999999999999999987 4 777765322 223455556664 45
Q ss_pred ChhHHHHHh--C-CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec-CCCCCHHHHHHHHHHHHhh
Q psy15216 302 EGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 302 ~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~-~~~~t~edid~li~~L~~~ 369 (2602)
+..++...| + ||.+++|..+.. .+++||++ +++++++|+++++++|++.
T Consensus 315 ~~~~l~~~L~~~~gi~v~~g~~~~~-------------------~~~lRi~~~~~~~~~~~i~~~~~~l~~~ 367 (392)
T 2z9v_A 315 DEKALRQAARARYGVVFSSGRGETL-------------------GKLTRIGHMGPTAQPIYAIAALTALGGA 367 (392)
T ss_dssp CHHHHHHHHHHHHCEECEECCGGGT-------------------TTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEecCCCCCC-------------------CCeEEEeCcccccCHHHHHHHHHHHHHH
Confidence 667777777 5 999988764321 37899996 4488999999999999864
No 51
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.96 E-value=1.9e-28 Score=327.25 Aligned_cols=343 Identities=15% Similarity=0.161 Sum_probs=269.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchh-hhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYG-WTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~-~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
||+++.++.|+.+.+++.+.+.. |.+.....+..+ ..+....+++++++++++|+++++|++|+|+|+++++++.++.
T Consensus 71 ld~~~~g~~p~~v~~~i~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~ 149 (465)
T 3e9k_A 71 FLGNSLGLQPKMVKTYLEEELDK-WAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFF 149 (465)
T ss_dssp CBTTTSCCEETTHHHHHHHHHHH-HHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHC
T ss_pred ecCCccCCChHHHHHHHHHHHHH-HHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhc
Confidence 68889899888898888877743 221111001100 1122345778999999999998999999999999999999986
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHH-HHhCCcEE-----EEeccCCCCccChHHHHhhcc---CCceEEEEecccCccc
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRV-----TYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVNNEIG 150 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v-----~~v~~~~~~~ld~e~l~~~i~---~~tklv~i~~~~npTG 150 (2602)
. ...+|++|+++.++|+++...+.. ++..|+++ ..++.+.++.+|+++|+++|+ +++++|++++++||||
T Consensus 150 ~-~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG 228 (465)
T 3e9k_A 150 K-PTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTG 228 (465)
T ss_dssp C-CCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTC
T ss_pred c-ccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcc
Confidence 1 113456699999999998876663 46678774 445556678899999999996 6899999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecccccccccccCCCCCccEEEecccccc--CCCCcEEEEEecCCCCcccceecCCCc-
Q psy15216 151 VIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIY--GPKGIGALYIRRNPRTRIEAQIHGGGH- 227 (2602)
Q Consensus 151 ~~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~--Gp~G~G~l~~~~~~~~~l~~~~~g~~~- 227 (2602)
.+.|+++|.++|++||+++++|++|+.|..++++.++++|++++|+||++ ||.|+|++++++++.+.+.+...||..
T Consensus 229 ~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~ 308 (465)
T 3e9k_A 229 QHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGH 308 (465)
T ss_dssp BBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGB
T ss_pred eeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCC
Confidence 99999999999999999999999999999999888889999999999966 677899999999988888776655322
Q ss_pred -----------------cccccccCcchhHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhhcc---------Cce
Q psy15216 228 -----------------EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESI---------EEI 280 (2602)
Q Consensus 228 -----------------~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~---------~g~ 280 (2602)
..+++.|+++..+++++.+++++... ++++++++..++++++.+.|.+.. +++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 388 (465)
T 3e9k_A 309 ELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVV 388 (465)
T ss_dssp CHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CE
T ss_pred CCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCe
Confidence 24566789999999999999996554 489999999999999999998732 789
Q ss_pred EEeCCCCC-CCCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec-CCCCCH
Q psy15216 281 YINGDMNN-RIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTE 356 (2602)
Q Consensus 281 ~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~-~~~~t~ 356 (2602)
+++.+.+. .....+.+.++ .+..++...| +||.++.+ . +++||+|+ +.+++.
T Consensus 389 ~~~~p~~~~~~g~~~~~~~~-~~~~~l~~~L~~~Gi~v~~~----~-------------------~~~iRis~~~~~~t~ 444 (465)
T 3e9k_A 389 NIITPSHVEERGCQLTITFS-VPNKDVFQELEKRGVVCDKR----N-------------------PNGIRVAPVPLYNSF 444 (465)
T ss_dssp EECSCSSGGGBCSCEEEEEC-CTTCCHHHHHHTTTEECEEE----T-------------------TTEEEEBCCTTTCCH
T ss_pred EEeCCCCHhhcccEEEEEec-CCHHHHHHHHHHCCEEEecC----C-------------------CCEEEEeCcccCCCH
Confidence 98876432 12344555565 4556677766 78887621 1 27899998 899999
Q ss_pred HHHHHHHHHHHhh
Q psy15216 357 KEIDFTIKLLKMK 369 (2602)
Q Consensus 357 edid~li~~L~~~ 369 (2602)
+|+++++++|++.
T Consensus 445 edi~~~~~~l~~~ 457 (465)
T 3e9k_A 445 HDVYKFTNLLTSI 457 (465)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999974
No 52
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.96 E-value=5.8e-27 Score=305.97 Aligned_cols=342 Identities=19% Similarity=0.262 Sum_probs=273.9
Q ss_pred eeeeccCC-CCCCCHHHHHHHHHHHhhcc-CCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q psy15216 1394 TNIVFKDA-TTPIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAI 1471 (2602)
Q Consensus 1394 ~~v~L~~~-~~~~~~~v~eal~~~l~~~~-~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al 1471 (2602)
..++++.+ ..+.++.+.+++.+.+.... .++.. +...........++|+.+++++|+++++|++|+|+|+|++.++
T Consensus 16 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~ 93 (390)
T 1elu_A 16 NKTYFNFGGQGILPTVALEAITAMYGYLQENGPFS--IAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVL 93 (390)
T ss_dssp TSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSSS--HHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHH
T ss_pred CeEEecCCccCCCCHHHHHHHHHHHHHHhccCCcc--hhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHH
Confidence 35677643 45677889999999887632 22321 1111222467889999999999998889999999999999999
Q ss_pred HhhhhhhccCCCEEEEcCCCCcchHHHHHH-HHhCCcEEEEeccC--CCCCcChhHHHhhccCCceEEEEeccccccccc
Q psy15216 1472 KGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKPK--NNGLITLSQLEEKICSDTILVSVMLVNNEIGVI 1548 (2602)
Q Consensus 1472 ~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~~--~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~ 1548 (2602)
.++. +++||+|+++.++|+++...+.. ++..|++++.++.+ .++.+|+++|++++++++++|++++++||||.+
T Consensus 94 ~~~~---~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~ 170 (390)
T 1elu_A 94 WGLD---WHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQV 170 (390)
T ss_dssp HHSC---CCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCB
T ss_pred hCCC---CCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCcee
Confidence 9983 27999999999999998776543 24449999999986 567899999999999999999999999999999
Q ss_pred cChHHHHHHhh----hcCCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCccccccccCCc
Q psy15216 1549 QPILEIGELCR----SKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGH 1623 (2602)
Q Consensus 1549 ~~l~~I~~ia~----~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~~~~g~~~ 1623 (2602)
+|+++|.++|+ +||+++|+|++|+.|..++++...++|++++|+|| ++|+.|+|++++++++++.+.+...|+..
T Consensus 171 ~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g~~~ 250 (390)
T 1elu_A 171 LPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWRS 250 (390)
T ss_dssp CCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTTT
T ss_pred cCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCCccccCCc
Confidence 99999999999 99999999999999988877777789999999999 88898999999999888887765554432
Q ss_pred ---------------cccCCCCCcchhHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCC
Q psy15216 1624 ---------------EYGLRSGTLATHQIVGMGEAFRLARI-E-MKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRI 1686 (2602)
Q Consensus 1624 ---------------~~~~~~gt~~~~~~~al~~aL~~~~~-~-~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~ 1686 (2602)
...+..++++...+.++.++++.+.. + +++..+++.++++++.+.|.+ ++++.+..+.. ..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~-~~ 328 (390)
T 1elu_A 251 ITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQ-LPHVHCLATSA-PQ 328 (390)
T ss_dssp EEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-STTEEESCSSC-CS
T ss_pred ccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEecCcc-cc
Confidence 12456688888888888888886543 3 888999999999999999988 67998875421 12
Q ss_pred CceEEEEEe-cCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 1687 PHNLNISFN-FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 1763 (2602)
Q Consensus 1687 ~~~~~~~~~-~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~ 1763 (2602)
..+..+.++ +.+..++...| +||.++++. . .+++||+++.+++.+|+++++++|+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~---~-------------------~~~iRis~~~~~~~~~i~~~~~~l~ 386 (390)
T 1elu_A 329 AGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA---D-------------------PDCIRACCHYITDEEEINHLLARLA 386 (390)
T ss_dssp SSEEEEEECSSSCHHHHHHHHHHTTEECEEET---T-------------------TTEEEEECCTTCCHHHHHHHHHHHT
T ss_pred ccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC---C-------------------CCeEEEecccCCCHHHHHHHHHHHH
Confidence 344455554 33556676666 799988764 1 2789999999999999999999998
Q ss_pred H
Q psy15216 1764 M 1764 (2602)
Q Consensus 1764 ~ 1764 (2602)
+
T Consensus 387 ~ 387 (390)
T 1elu_A 387 D 387 (390)
T ss_dssp T
T ss_pred h
Confidence 5
No 53
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=1.9e-28 Score=309.65 Aligned_cols=330 Identities=13% Similarity=0.054 Sum_probs=258.0
Q ss_pred eeccCCCCCCCHHHHHHHHHHHhhccCCCCCcc--chhHHHHHHHHHHHHHHHHHHhCCC-CCcEEE-eCCHHHHHHHHH
Q psy15216 1396 IVFKDATTPIDPRVVDKMIPYLRVQFGNPASRN--HIYGWTAEKAIEKARNEVAQLIYAD-PREIIW-TSGATESNNLAI 1471 (2602)
Q Consensus 1396 v~L~~~~~~~~~~v~eal~~~l~~~~~np~~~~--~~~~~~~~~~~~~lr~~ia~~~g~~-~~~iv~-t~gaT~al~~al 1471 (2602)
..+..++++.|+++++++.+.+.+.++||.+.. ++.+..+...++++|+.+++++|++ +.+|+| |+|+|+++++++
T Consensus 7 ~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~ 86 (361)
T 3m5u_A 7 INFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIP 86 (361)
T ss_dssp EECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHH
T ss_pred EeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHH
Confidence 345677889999999999999887777765421 2336678899999999999999996 457888 999999999999
Q ss_pred HhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCC--cChhHHHhhccCCceEEEEecccccccccc
Q psy15216 1472 KGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGL--ITLSQLEEKICSDTILVSVMLVNNEIGVIQ 1549 (2602)
Q Consensus 1472 ~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~--id~d~l~~~i~~~t~lv~l~~~~n~tG~~~ 1549 (2602)
.++. +||++++...++.+. .+...+++.|+++.++++++++. ++++. + |+++|++|.++|.+|.||+++
T Consensus 87 ~~~~-----~~~~~~~i~~~~~~~-~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~~~~e~~tG~~~ 157 (361)
T 3m5u_A 87 MNLA-----LNGVCEYANTGVWTK-KAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYICSNNTIYGTQY 157 (361)
T ss_dssp HHHC-----CSSCEEEEECSHHHH-HHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEEESEETTTTEEC
T ss_pred HhcC-----CCCeEEEEeCCHHHH-HHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEEeCCCCCcceeC
Confidence 9885 577553222233343 33455567799999999998774 57776 4 999999999999999999998
Q ss_pred ChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEEEecCCCCcccc----ccccCC--c
Q psy15216 1550 PILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEA----QIHGGG--H 1623 (2602)
Q Consensus 1550 ~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~----~~~g~~--~ 1623 (2602)
|. +++ +|+++++|++|++|..++|+.+ +|++++|+||++||+|+|++++++++.+.+.| .+..+. .
T Consensus 158 ~~-----i~~-~~~~~~vD~~q~~g~~~id~~~--~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~ 229 (361)
T 3m5u_A 158 QN-----YPK-TKTPLIVDASSDFFSRKVDFSN--IALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHA 229 (361)
T ss_dssp SS-----CCC-CSSCEEEECGGGTTSSCCCCTT--EEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHH
T ss_pred Cc-----ccc-cCCEEEEEcccccCCCCCCccc--CCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCceeehHHHh
Confidence 82 444 4999999999999999999985 69999999998899999999999887655543 222211 1
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCcE-EEeCCCCCCCCceEEEEEec-CCc
Q psy15216 1624 EYGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHNLNISFNF-IEG 1699 (2602)
Q Consensus 1624 ~~~~~~gt~~~~~~~al~~aL~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~gl-~i~~~~~~~~~~~~~~~~~~-~~~ 1699 (2602)
+.....+|++++.++++.+|++++.. +++++.++..+++++++++|.+ ++++ .++.++..+.+..+.|.+++ ...
T Consensus 230 ~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~-~~g~~~~~~~~~~rs~~ivsf~~~~~~~~ 308 (361)
T 3m5u_A 230 ENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL-SNGFYKGHADKKDRSLMNVSFNIAKNKDL 308 (361)
T ss_dssp HTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT-STTSEEESSCGGGBCSSEEEEEESSCTTH
T ss_pred hcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH-CCCeeeccCCHHHcCCeEEEEECCCchhh
Confidence 24556789999999999999997664 5999999999999999999987 6655 55544444566677788775 221
Q ss_pred -HHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1700 -ESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1700 -~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
..+...| +||.++.|..+. +.+|+|++.+||.+||++++++|++
T Consensus 309 ~~~~~~~L~~~gI~~~~g~~~~---------------------g~iRiS~~~~~t~edId~l~~al~~ 355 (361)
T 3m5u_A 309 EPLFVKEAEEAGMIGLKGHRIL---------------------GGIRASIYNALNLDQVKTLCEFMKE 355 (361)
T ss_dssp HHHHHHHHHHTTEECCBCCTTT---------------------CSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCEEecCCCcc---------------------CeEEEEccCCCCHHHHHHHHHHHHH
Confidence 3555555 799988765421 4599999999999999999999997
No 54
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.96 E-value=5.4e-28 Score=316.06 Aligned_cols=332 Identities=16% Similarity=0.204 Sum_probs=265.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHhccc
Q psy15216 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~-~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
++.+..++|+.+++++.+.+.. + +........+++++++++++|++++ +|++|+|+|+|+++++.++.
T Consensus 23 ~~~g~~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~- 91 (393)
T 2huf_A 23 MGPGPSNAPQRVLDAMSRPILG-----H-----LHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLL- 91 (393)
T ss_dssp CSSSCCCCCHHHHHHTTSCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHC-
T ss_pred ecCCCCCCCHHHHHHHHhhhcc-----C-----CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHh-
Confidence 4566668889988888765432 1 1223456789999999999999875 89999999999999999986
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCcccccccHHHHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIG 159 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l~~I~ 159 (2602)
++||+|++++++|+++ .+...++..|++++.+++++++.+|+++|++++++ ++++|++++++||||.++|+++|.
T Consensus 92 ---~~gd~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~ 167 (393)
T 2huf_A 92 ---EDGDVILIGHTGHWGD-RSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVG 167 (393)
T ss_dssp ---CTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHH
T ss_pred ---CCCCEEEEECCCcchH-HHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHH
Confidence 7999999999999985 34444566799999999988888999999999987 899999999999999999999999
Q ss_pred HHHHhcCCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCcccce-------e---------
Q psy15216 160 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQ-------I--------- 222 (2602)
Q Consensus 160 ~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~-------~--------- 222 (2602)
++|++||+++|+|++|+++..++++..+++|++++|+|| ++||+|+|++++++++++.+.+. +
T Consensus 168 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (393)
T 2huf_A 168 ALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDY 247 (393)
T ss_dssp HHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHH
T ss_pred HHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhh
Confidence 999999999999999999888877777789999999999 57899999999998766554432 1
Q ss_pred cCCCccccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc-c
Q psy15216 223 HGGGHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-F 300 (2602)
Q Consensus 223 ~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~-~ 300 (2602)
.++....++..++++..+++++.++++... .++++..+++.++++++.+.|.+ + ++.++.++..+.+.++.+.++ .
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~ 325 (393)
T 2huf_A 248 WGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQD-A-GFELYADPKDRLSTVTTIKVPQG 325 (393)
T ss_dssp TTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCGGGBCTTEEEEECCTT
T ss_pred hccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCccccCCcEEEEEcCCC
Confidence 111122345668899999999988998654 35888999999999999999988 4 777665432223445556665 4
Q ss_pred cChhHHHHHh--C-CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCC-CCHHHHHHHHHHHHhh
Q psy15216 301 IEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF-TTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 301 ~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~-~t~edid~li~~L~~~ 369 (2602)
.+..++...| + ||.+++|..|.. .+++||+++.+ ++++++++++++|++.
T Consensus 326 ~~~~~~~~~L~~~~gi~v~~g~~~~~-------------------~~~~Ri~~~~~~~~~e~i~~~~~~l~~~ 379 (393)
T 2huf_A 326 VDWLKAAQYAMKTYLVEISGGLGPTA-------------------GQVFRIGLMGQNATTERVDRVLQVFQEA 379 (393)
T ss_dssp CCHHHHHHHHHHHHCEECBCCCGGGT-------------------TTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEecCccccc-------------------CCEEEEEcccCcCCHHHHHHHHHHHHHH
Confidence 5667777766 3 999988775532 27899999554 5799999999999864
No 55
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.96 E-value=2.6e-27 Score=305.81 Aligned_cols=331 Identities=15% Similarity=0.127 Sum_probs=261.6
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHhcccc
Q psy15216 3 YSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHF 81 (2602)
Q Consensus 3 ~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~-~~~Iv~t~g~T~al~~~~~~l~~~ 81 (2602)
+.+..+.|+.+++++.+.+..... +.+..+....+..+++++++++++|++ ++++++++|+|+|+++++.++.
T Consensus 9 ~p~p~~~~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~-- 82 (362)
T 3ffr_A 9 TPGPSELYPTVRQHMITALDEKIG----VISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV-- 82 (362)
T ss_dssp CSSSCCCCTTHHHHHHHHHHTTTT----TSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC--
T ss_pred cCCCcCCCHHHHHHHHHHhcCCcc----CcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc--
Confidence 455667889999999888764220 011123445578899999999999984 5789999999999999999988
Q ss_pred cccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHH
Q psy15216 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGEL 161 (2602)
Q Consensus 82 ~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~l 161 (2602)
++ +.+++.. .|.+ ..+...++..|++++.++.++++.+|+++|+ ++++|++|++++++||||.++|+++|.++
T Consensus 83 --~~-~~i~~~~-~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~i~~l 155 (362)
T 3ffr_A 83 --EK-KSFHCVN-GSFS-KRFYEFAGELGREAYKEEAAFGKGFYPADIT--VPADAEIICLTHNETSSGVSMPVEDINTF 155 (362)
T ss_dssp --SS-EEEEEEC-SHHH-HHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CCTTCCEEEEESEETTTTEECCHHHHTTS
T ss_pred --CC-cEEEEcC-cHHH-HHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCCHHHHHHH
Confidence 56 4454544 4444 2233455667999999999888889999998 88899999999999999999999999999
Q ss_pred HHhc-CCEEEEecccccccccccCCCCCccEEEeccccccC-CCCcEEEEEecCCCCcccceecCCCcc-----------
Q psy15216 162 CRSK-GVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGHE----------- 228 (2602)
Q Consensus 162 a~~~-g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~G-p~G~G~l~~~~~~~~~l~~~~~g~~~~----------- 228 (2602)
|++| |+++|+|++|+.+..++++.. +|++++|+||+++ |+|+|++++++++++.+.+...|++..
T Consensus 156 a~~~p~~~li~D~a~~~~~~~~~~~~--~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~ 233 (362)
T 3ffr_A 156 RDKNKDALIFVDAVSSLPYPKFDWTK--IDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLE 233 (362)
T ss_dssp GGGSTTSEEEEECTTTTTSSCCCTTS--CSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHH
T ss_pred HHhCCCCEEEEecccccCCcccChhH--CcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHHHHHH
Confidence 9999 999999999999988777655 7999999999776 999999999998877776655433211
Q ss_pred ---ccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCC-CCCCCceEEEEEcccCh
Q psy15216 229 ---YGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDM-NNRIPHNLNISFNFIEG 303 (2602)
Q Consensus 229 ---~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~-~~~~~~~~~~~~~~~~~ 303 (2602)
.....++++...++++.+++++.. .+++++.+++.++++++++.|.+ +||++++.+. ....+..+.+.++. +.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 311 (362)
T 3ffr_A 234 KARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIES-SKVFSFGVEDAKLRSMTTIVANTTM-LP 311 (362)
T ss_dssp HHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-CSSEEESSSCGGGBCSSEEEEEESS-CH
T ss_pred HhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH-ccCceeccCChhhcCCceEEEecCC-CH
Confidence 112267899999999988988543 45789999999999999999987 7899987632 22334555666666 67
Q ss_pred hHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 304 ESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 304 ~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++.+.| +||.+++|..+.. .+++|||++.+++++|+++++++|++.
T Consensus 312 ~~~~~~l~~~gi~~~~g~~~~~-------------------~~~iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 312 GEINKILEPFDMAVGAGYGSKK-------------------ETQIRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp HHHHHHHGGGTEEEEECSGGGT-------------------TTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEecCccccC-------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 7787777 7999998865433 278999999999999999999999863
No 56
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.95 E-value=1.4e-27 Score=307.07 Aligned_cols=324 Identities=11% Similarity=0.090 Sum_probs=261.3
Q ss_pred cCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1399 KDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1399 ~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
..+..+.++.+++++.+.+.. + .++.......++|+++++++|++++++++|+|+|+|++.++.++.
T Consensus 6 ~~~p~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~--- 72 (352)
T 1iug_A 6 TPGPVRLHPKALEALARPQLH-----H-----RTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLF--- 72 (352)
T ss_dssp SSSSCCCCHHHHHHHHSCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHC---
T ss_pred cCCCCCCCHHHHHHhccCCCC-----c-----cCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhcc---
Confidence 455668888999988776531 1 133455678899999999999988889999999999999999986
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHh
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELC 1558 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia 1558 (2602)
++||+|++++++|+++. ....+...|++++.++.++++.+|++++++ +++++|++++++||||.+.|+++|.++|
T Consensus 73 -~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~ 147 (352)
T 1iug_A 73 -APGERVLVPVYGKFSER-FYEIALEAGLVVERLDYPYGDTPRPEDVAK---EGYAGLLLVHSETSTGALADLPALARAF 147 (352)
T ss_dssp -CTTCEEEEEECSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCTTTSCC---SSCSEEEEESEETTTTEECCHHHHHHHH
T ss_pred -CCCCeEEEEeCCchhHH-HHHHHHHcCCceEEEeCCCCCCCCHHHHhc---cCCcEEEEEEecCCcceecCHHHHHHHH
Confidence 79999999999999986 445556679999999998888899999987 7899999999999999999999999999
Q ss_pred hhc--CCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCcccc---------ccccCCcccc
Q psy15216 1559 RSK--GVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEA---------QIHGGGHEYG 1626 (2602)
Q Consensus 1559 ~~~--gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~---------~~~g~~~~~~ 1626 (2602)
++| |+++|+|++|+.|..++++..+++|++++|+|| ++||.|+|+++++++.++.+.+ ... .....
T Consensus 148 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 225 (352)
T 1iug_A 148 KEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELK--AQKEG 225 (352)
T ss_dssp HHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHH--HHTTT
T ss_pred HhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHHHHh--hcccC
Confidence 999 999999999999887777766778999999999 8889999999998875544332 100 01123
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe-cCCcHHHHHh
Q psy15216 1627 LRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGESLLMA 1705 (2602)
Q Consensus 1627 ~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 1705 (2602)
...++++...+.++.++++.....+++..+++.++++++.+.|.+ . ++.+..+. ..+....+.++ +.+..++...
T Consensus 226 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 301 (352)
T 1iug_A 226 ESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEE-G-GLRPVPKR--FSPAVAAFYLPEGVPYARVKEA 301 (352)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHH-T-TCEESCSS--BCTTCEEEECCTTCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccccc--cCCeEEEEEcCCCCCHHHHHHH
Confidence 456788888888888898865555788899999999999999988 5 78776542 23445556665 3456677776
Q ss_pred c--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1706 I--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1706 L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
| +||.+++|..+.. .+++|++++.++|.+|+++++++|++.
T Consensus 302 l~~~gi~v~~~~~~~~-------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~ 344 (352)
T 1iug_A 302 FAQRGAVIAGGQGPLK-------------------GKVFRLSLMGAYDRYEALGVAGMFREV 344 (352)
T ss_dssp HHTTTEECEECCGGGT-------------------TTEEEECCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHCCEEEEeCCCccC-------------------CCEEEEEccccCCHHHHHHHHHHHHHH
Confidence 6 7999988763221 278999999999999999999999873
No 57
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.95 E-value=2.2e-27 Score=309.51 Aligned_cols=333 Identities=15% Similarity=0.201 Sum_probs=264.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHhcc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~-~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
||+++.++.++.+.+++.+.+.. + ++....+..+++++++++++|++ ++++++++|+|+|+.+++.++.
T Consensus 23 l~~~~~~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~ 92 (386)
T 2dr1_A 23 LFTAGPVACFPEVLEIMKVQMFS-----H-----RSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGV 92 (386)
T ss_dssp ECCSSSCCCCHHHHHHTTSCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHS
T ss_pred eecCCCcCCcHHHHHHHhccccc-----c-----cCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhh
Confidence 57888889999988887765431 1 12234678899999999999997 6779999999999999999986
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhc--cCCceEEEEecccCcccccccHHH
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKI--CSDTILVSVMLVNNEIGVIQPILE 157 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i--~~~tklv~i~~~~npTG~~~~l~~ 157 (2602)
++||+|++++++|++. .+...++..|++++.++.++++.+|+++|++++ .+++++|++++++||||.+.|+++
T Consensus 93 ----~~gd~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~ 167 (386)
T 2dr1_A 93 ----SKGGKVLVTIIGAFGK-RYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPE 167 (386)
T ss_dssp ----CTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHH
T ss_pred ----cCCCeEEEEcCCchhH-HHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHH
Confidence 7999999999999983 122333456999999999888889999999999 578999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccC-CCCcEEEEEecCCCCccccee-cCCC---------
Q psy15216 158 IGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQI-HGGG--------- 226 (2602)
Q Consensus 158 I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~G-p~G~G~l~~~~~~~~~l~~~~-~g~~--------- 226 (2602)
|.++|++||+++|+|++|+.+..++++..+++|++++|+||+++ |.|+|++++++++++.+.+.. .++.
T Consensus 168 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (386)
T 2dr1_A 168 LAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKY 247 (386)
T ss_dssp HHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHH
T ss_pred HHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHHHHh
Confidence 99999999999999999999887777777789999999999665 558999999987766554311 1110
Q ss_pred cc-ccccccCcchhHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc-ccC
Q psy15216 227 HE-YGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIE 302 (2602)
Q Consensus 227 ~~-~~~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~-~~~ 302 (2602)
.. .....++++...++++.++++.... ++++..++++++++++.+.|.+ . ++.+..+...+.+.++.+.++ ..+
T Consensus 248 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~ 325 (386)
T 2dr1_A 248 LKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVRE-I-GLDILAEPGHESPTITAVLTPPGIK 325 (386)
T ss_dssp HHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCTTCBCSSEEEEECCTTCC
T ss_pred hccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-c-CCeeCcCccccCCceEEEEcCCCCC
Confidence 00 1244678888888888889986554 4789999999999999999988 4 777665432223445555555 345
Q ss_pred hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 303 GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 303 ~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..++...| +||.++++..+.. .+++||+++.+++++|+++++++|++.
T Consensus 326 ~~~~~~~l~~~gi~v~~~~~~~~-------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~ 375 (386)
T 2dr1_A 326 GDEVYEAMRKRGFELAKGYGSVK-------------------EKTFRIGHMGYMKFEDIQEMLDNLREV 375 (386)
T ss_dssp HHHHHHHHHHTTEECEECCGGGT-------------------TTEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEecCccccC-------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 66777777 7999988764321 378999999999999999999999964
No 58
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.95 E-value=1.4e-27 Score=312.00 Aligned_cols=335 Identities=14% Similarity=0.102 Sum_probs=264.1
Q ss_pred eeeccC-CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHh
Q psy15216 1395 NIVFKD-ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKG 1473 (2602)
Q Consensus 1395 ~v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~ 1473 (2602)
.+|++. +..+.++.+++++.+.+.. +. ++.......++|+++++++|++++++++|+|+|+|+++++.+
T Consensus 9 ~~yl~~~~~~~~~~~v~~a~~~~~~~-----~~-----~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~ 78 (392)
T 2z9v_A 9 PVITLTAGPVNAYPEVLRGLGRTVLY-----DY-----DPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAAS 78 (392)
T ss_dssp CSEECSSSCCCCCHHHHHHTTSCCCC-----TT-----SHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHH
T ss_pred cceeecCCCcCCCHHHHHHHhccccc-----cc-----cHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHH
Confidence 467764 4467788888888765532 11 234556788999999999999888999999999999999999
Q ss_pred hhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhc--cCCceEEEEeccccccccccCh
Q psy15216 1474 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKI--CSDTILVSVMLVNNEIGVIQPI 1551 (2602)
Q Consensus 1474 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i--~~~t~lv~l~~~~n~tG~~~~l 1551 (2602)
+. ++||+|++++++|+++. ....+...|++++.++.++++.+|+++|++++ ++++++|++++++||||.++|+
T Consensus 79 ~~----~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l 153 (392)
T 2z9v_A 79 LI----SPDDVVLNLASGVYGKG-FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPI 153 (392)
T ss_dssp HC----CTTCCEEEEESSHHHHH-HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCH
T ss_pred hc----CCCCEEEEecCCcccHH-HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccH
Confidence 86 79999999999999874 33444445999999999888889999999999 5689999999999999999999
Q ss_pred HHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCcccccc-------cc---
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQI-------HG--- 1620 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~~~-------~g--- 1620 (2602)
++|.++|++||+++|+|++|+.|..++++..+++|++++|+|| ++||.|+|++++++++++.+.+.. .+
T Consensus 154 ~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~ 233 (392)
T 2z9v_A 154 DAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVD 233 (392)
T ss_dssp HHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGG
T ss_pred HHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccHHH
Confidence 9999999999999999999999887777777789999999999 788999999999987665554321 11
Q ss_pred ---CCccccCCCCCcchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCC-CCCCceEEEEEe
Q psy15216 1621 ---GGHEYGLRSGTLATHQIVGMGEAFRLARIE-MKEELKRILFLQKRLYNGLMESIEEIYINGDMN-NRIPHNLNISFN 1695 (2602)
Q Consensus 1621 ---~~~~~~~~~gt~~~~~~~al~~aL~~~~~~-~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~-~~~~~~~~~~~~ 1695 (2602)
+........++++...+.++.++++..... +++..+++.++++++.+.|.+ + ++.+..++. ...+.+..+.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~ 311 (392)
T 2z9v_A 234 WENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTA-M-GLSVWAASDSIASPTTTAVRTP 311 (392)
T ss_dssp GTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSSSGGGBCTTEEEEECC
T ss_pred HHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCCccccCCceEEEECC
Confidence 001234557888988888888889865544 788999999999999999988 4 776654222 123444555554
Q ss_pred -cCCcHHHHHhc--C-CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCC-CCCHHHHHHHHHHHHHh
Q psy15216 1696 -FIEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR-FTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1696 -~~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~-~~t~edid~li~~L~~~ 1765 (2602)
+.+..++...| + ||.+++|..+.. .+++|+++.. ++|.+|+++++++|++.
T Consensus 312 ~~~~~~~l~~~L~~~~gi~v~~g~~~~~-------------------~~~lRi~~~~~~~~~~~i~~~~~~l~~~ 367 (392)
T 2z9v_A 312 DGVDEKALRQAARARYGVVFSSGRGETL-------------------GKLTRIGHMGPTAQPIYAIAALTALGGA 367 (392)
T ss_dssp TTCCHHHHHHHHHHHHCEECEECCGGGT-------------------TTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCEEEecCCCCCC-------------------CCeEEEeCcccccCHHHHHHHHHHHHHH
Confidence 34566777666 4 999988764322 2789999644 88999999999999874
No 59
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.95 E-value=1.2e-27 Score=311.57 Aligned_cols=329 Identities=16% Similarity=0.203 Sum_probs=263.9
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC--CcEEEeCCHHHHHHHHHHhccc
Q psy15216 3 YSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP--REIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 3 ~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~--~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
+.+..++++.+++++.+.+.. ..+....+..+++++++++++|+++ +++++|+|+|+|++ ++.++.
T Consensus 7 ~~gp~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~- 74 (384)
T 3zrp_A 7 HVGPTTIKEDVLVAGLENNVG----------FTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLL- 74 (384)
T ss_dssp CSSCSCCCHHHHHHTTCCSCC----------TTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGC-
T ss_pred cCCCCCCCHHHHHHhhccccc----------cccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhc-
Confidence 456668889988887765431 1133446788999999999999987 78999999999999 888776
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCcccccccHHHHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIG 159 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l~~I~ 159 (2602)
++||+|+++++.|++. .+...++..|++++.++.++++.+|++++++++++ ++++|++++++||||.++|+++|.
T Consensus 75 ---~~gd~vi~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~ 150 (384)
T 3zrp_A 75 ---KPNDKILVVSNGVFGD-RWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVI 150 (384)
T ss_dssp ---CTTCEEEEECSSHHHH-HHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHH
T ss_pred ---CCCCEEEEecCCcchH-HHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHH
Confidence 8999999999998773 23344466799999999988888999999999987 899999999999999999999999
Q ss_pred HHHHhcCCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCcc-cceecCCC-----------
Q psy15216 160 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRI-EAQIHGGG----------- 226 (2602)
Q Consensus 160 ~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l-~~~~~g~~----------- 226 (2602)
++|++||+++|+|++|+.+..++++..+++|++++|+|| ++|+.|+|++++++++++.+ .+......
T Consensus 151 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (384)
T 3zrp_A 151 NKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVM 230 (384)
T ss_dssp HHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHH
T ss_pred HHHHhcCCEEEEECcccccCccccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHH
Confidence 999999999999999999998888888889999999999 55789999999998876665 22110000
Q ss_pred cc----ccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCC-CCCCCceEEEEEcc
Q psy15216 227 HE----YGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDM-NNRIPHNLNISFNF 300 (2602)
Q Consensus 227 ~~----~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~-~~~~~~~~~~~~~~ 300 (2602)
.. .....|+++...++++.+++++.. .++++..++++++++++.+.|.+ . ++++..+. ....+.++.+.++.
T Consensus 231 ~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~ 308 (384)
T 3zrp_A 231 RGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEA-L-GLEIVARRPESYSNTVTGVILKV 308 (384)
T ss_dssp HHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSCSSGGGBCSSEEEEECSS
T ss_pred HhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-C-CCeEccCcccccCccEEEEECCC
Confidence 00 122236889999999989998654 44889999999999999999988 4 77776554 22234555666666
Q ss_pred cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 301 IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 301 ~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.+..++.+.| +||.+++|..+.. +++|++++.+++++|+++++++|++.
T Consensus 309 ~~~~~~~~~l~~~gi~v~~g~~~~~--------------------~~iRi~~~~~~~~e~i~~~~~~l~~~ 359 (384)
T 3zrp_A 309 ADPQKVLAGTVNEGVEFAPGVHPAF--------------------KYFRIGHMGWVTPNDAIIAISVIERT 359 (384)
T ss_dssp SCHHHHHHHHHTTTCCCEECCCTTC--------------------CEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCEEEecCCCCCc--------------------CEEEEeccccCCHHHHHHHHHHHHHH
Confidence 6677777777 7898887764311 68999999999999999999999964
No 60
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.95 E-value=2e-27 Score=317.18 Aligned_cols=346 Identities=16% Similarity=0.170 Sum_probs=265.6
Q ss_pred eeeeccCCC-CCCCHHHHHHHHHHHhhccCCCCCccchhH-HHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q psy15216 1394 TNIVFKDAT-TPIDPRVVDKMIPYLRVQFGNPASRNHIYG-WTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAI 1471 (2602)
Q Consensus 1394 ~~v~L~~~~-~~~~~~v~eal~~~l~~~~~np~~~~~~~~-~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al 1471 (2602)
..+|++.+. .+.+..+.+++.+.+..+ ++.+...|..+ ..+....+++++++++++|+++++|++|+|+|+++++++
T Consensus 67 ~~iyld~~~~g~~p~~v~~~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~ 145 (465)
T 3e9k_A 67 NAIYFLGNSLGLQPKMVKTYLEEELDKW-AKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLLM 145 (465)
T ss_dssp BCEECBTTTSCCEETTHHHHHHHHHHHH-HHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHH
T ss_pred CeEEecCCccCCChHHHHHHHHHHHHHH-HhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHH
Confidence 568898655 566677777777766432 11110000000 012234567899999999999899999999999999999
Q ss_pred HhhhhhhccCCCEEEEcCCCCcchHHHHH-HHHhCCcEE-----EEeccCCCCCcChhHHHhhcc---CCceEEEEeccc
Q psy15216 1472 KGAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDGFRV-----TYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVN 1542 (2602)
Q Consensus 1472 ~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~-~~~~~G~~v-----~~v~~~~~~~id~d~l~~~i~---~~t~lv~l~~~~ 1542 (2602)
.++.. ...++++|+++.++|+++..++. .++..|+++ ..++.+.++.+|+++|+++|. ++|++|++++++
T Consensus 146 ~~~~~-~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~ 224 (465)
T 3e9k_A 146 LSFFK-PTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVH 224 (465)
T ss_dssp HHHCC-CCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBC
T ss_pred HHhcc-ccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcc
Confidence 99861 12345669999999999877665 345568764 344556678899999999996 789999999999
Q ss_pred cccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccccc--CCCceEEEEEecCCCCcccccccc
Q psy15216 1543 NEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIY--GPKGIGALYIRRNPRTRIEAQIHG 1620 (2602)
Q Consensus 1543 n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~--gp~G~G~l~~~~~~~~~l~~~~~g 1620 (2602)
||||.+.|+++|.++|++||+++++|++|+.|..++++.++++|++++|+||++ ||.|+|++++++++.+.+.+...|
T Consensus 225 n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g 304 (465)
T 3e9k_A 225 FYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVG 304 (465)
T ss_dssp TTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCC
T ss_pred cCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccC
Confidence 999999999999999999999999999999999999888889999999999955 787899999999888877765544
Q ss_pred CCc------------------cccCCCCCcchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcC--------
Q psy15216 1621 GGH------------------EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESI-------- 1673 (2602)
Q Consensus 1621 ~~~------------------~~~~~~gt~~~~~~~al~~aL~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~-------- 1673 (2602)
|.. ..+++.||++...+.++.++++.... ++++++++..++++++.+.|.+..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 384 (465)
T 3e9k_A 305 WFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATK 384 (465)
T ss_dssp GGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred ccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccC
Confidence 321 24566789999999999999996554 589999999999999999998732
Q ss_pred -CcEEEeCCCCC-CCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEec-CC
Q psy15216 1674 -EEIYINGDMNN-RIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GR 1748 (2602)
Q Consensus 1674 -~gl~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~-~~ 1748 (2602)
+++.+..+.+. .......+.++ .+..++...| +||.++.+ . .++||+|+ +.
T Consensus 385 ~~g~~~~~p~~~~~~g~~~~~~~~-~~~~~l~~~L~~~Gi~v~~~----~-------------------~~~iRis~~~~ 440 (465)
T 3e9k_A 385 KPVVNIITPSHVEERGCQLTITFS-VPNKDVFQELEKRGVVCDKR----N-------------------PNGIRVAPVPL 440 (465)
T ss_dssp --CEEECSCSSGGGBCSCEEEEEC-CTTCCHHHHHHTTTEECEEE----T-------------------TTEEEEBCCTT
T ss_pred CCCeEEeCCCCHhhcccEEEEEec-CCHHHHHHHHHHCCEEEecC----C-------------------CCEEEEeCccc
Confidence 68888865421 12334555555 3445566665 78887621 1 27899998 79
Q ss_pred CCCHHHHHHHHHHHHHh
Q psy15216 1749 FTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1749 ~~t~edid~li~~L~~~ 1765 (2602)
++|.+||++++++|++.
T Consensus 441 ~~t~edi~~~~~~l~~~ 457 (465)
T 3e9k_A 441 YNSFHDVYKFTNLLTSI 457 (465)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 99999999999999974
No 61
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.95 E-value=3.4e-27 Score=308.41 Aligned_cols=330 Identities=16% Similarity=0.205 Sum_probs=261.4
Q ss_pred CCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1400 DATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1400 ~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~-~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
.+..+.++.+.+++.+.+.. + + .........++|+++++++|++++ ++++|+|+|+|+..++.++.
T Consensus 25 ~g~~~~~~~v~~a~~~~~~~-----~---~--~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--- 91 (393)
T 2huf_A 25 PGPSNAPQRVLDAMSRPILG-----H---L--HPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLL--- 91 (393)
T ss_dssp SSCCCCCHHHHHHTTSCCCC-----T---T--SHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHC---
T ss_pred CCCCCCCHHHHHHHHhhhcc-----C---C--CHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHh---
Confidence 44567788888887665432 1 1 223456789999999999999875 79999999999999999986
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEeccccccccccChHHHHHH
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGEL 1557 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~~~~l~~I~~i 1557 (2602)
++||+|++++++|+++. ....++..|++++.++.++++.+|+++|++++++ ++++|++++++||||.++|+++|.++
T Consensus 92 -~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~ 169 (393)
T 2huf_A 92 -EDGDVILIGHTGHWGDR-SADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGAL 169 (393)
T ss_dssp -CTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHH
T ss_pred -CCCCEEEEECCCcchHH-HHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHH
Confidence 79999999999999853 3344455699999999988888999999999988 89999999999999999999999999
Q ss_pred hhhcCCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCccccc-------c---------cc
Q psy15216 1558 CRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQ-------I---------HG 1620 (2602)
Q Consensus 1558 a~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~~-------~---------~g 1620 (2602)
|++||+++|+|++|++|..++++..+++|++++|+|| ++||+|+|++++++++++.+.+. + ++
T Consensus 170 ~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (393)
T 2huf_A 170 CHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWG 249 (393)
T ss_dssp HHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTT
T ss_pred HHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhc
Confidence 9999999999999999888777777789999999999 67899999999987765544321 2 11
Q ss_pred CCccccCCCCCcchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe-cCC
Q psy15216 1621 GGHEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIE 1698 (2602)
Q Consensus 1621 ~~~~~~~~~gt~~~~~~~al~~aL~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~-~~~ 1698 (2602)
+....++..++++...+.++.++++.... ++++..+++.++++++.+.|.+ . ++.+..+.....+.+..+.++ +.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
T 2huf_A 250 CFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQD-A-GFELYADPKDRLSTVTTIKVPQGVD 327 (393)
T ss_dssp CSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCGGGBCTTEEEEECCTTCC
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCccccCCcEEEEEcCCCCC
Confidence 12234566789999999999889986543 5888999999999999999988 4 776654432223344555554 345
Q ss_pred cHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCC-CCHHHHHHHHHHHHHh
Q psy15216 1699 GESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF-TTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1699 ~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~-~t~edid~li~~L~~~ 1765 (2602)
..++...| +||.+++|..|.. .+++||+++.+ ++.+++++++++|++.
T Consensus 328 ~~~~~~~L~~~~gi~v~~g~~~~~-------------------~~~~Ri~~~~~~~~~e~i~~~~~~l~~~ 379 (393)
T 2huf_A 328 WLKAAQYAMKTYLVEISGGLGPTA-------------------GQVFRIGLMGQNATTERVDRVLQVFQEA 379 (393)
T ss_dssp HHHHHHHHHHHHCEECBCCCGGGT-------------------TTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEecCccccc-------------------CCEEEEEcccCcCCHHHHHHHHHHHHHH
Confidence 66777666 3999998775532 27899999554 5789999999999873
No 62
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.95 E-value=1.9e-27 Score=305.99 Aligned_cols=328 Identities=15% Similarity=0.155 Sum_probs=262.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHhcc
Q psy15216 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~--~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
.+++.+++|+.+++++.+.+.. + .++......+++|+++++++|++ ++++++|+|+|+|+++++.++.
T Consensus 4 ~~~gp~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~ 73 (353)
T 2yrr_A 4 LTPGPTPIPERVQKALLRPMRG-----H-----LDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLD 73 (353)
T ss_dssp CSSSSCCCCHHHHGGGGSCCCC-----T-----TCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCS
T ss_pred CCCCCCCCCHHHHHHHhccccc-----c-----cCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhc
Confidence 4567778999999888776532 1 12344567899999999999985 6789999999999999999987
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCcccccccHHHH
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEI 158 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l~~I 158 (2602)
+ |+|++++++|+++ .+...++..|++++.++.++++.+|+++|++++++ ++++|++++++||||.++|+++|
T Consensus 74 ----~--d~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i 146 (353)
T 2yrr_A 74 ----R--GPVLVLVNGAFSQ-RVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAI 146 (353)
T ss_dssp ----C--CCEEEEECSHHHH-HHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHH
T ss_pred ----C--CcEEEEcCCCchH-HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHH
Confidence 3 8999999999997 44455566799999999988888999999999987 89999999999999999999999
Q ss_pred HHHHHhcCCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCcccceecCCC---------cc
Q psy15216 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGG---------HE 228 (2602)
Q Consensus 159 ~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~~~g~~---------~~ 228 (2602)
.++|++||+++|+|++|+++..++++..+++|++++|+|| ++|++|+|++++++++++.+.. ..++. ..
T Consensus 147 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~ 225 (353)
T 2yrr_A 147 GALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTG-KRGWYLDLARVAEHWE 225 (353)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCC-CSCSTTCHHHHHHHHT
T ss_pred HHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCCCceEEEEECHHHHHHhcc-CCCccccHHHHhhhhh
Confidence 9999999999999999998877766666678999999999 6788999999999887665542 01110 01
Q ss_pred ccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc-ccChhHH
Q psy15216 229 YGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGESL 306 (2602)
Q Consensus 229 ~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~-~~~~~~~ 306 (2602)
.....++++...+.++.++++... .++++..++++++++++.+.|++ . ++++..++. ..+.++.+.++ ..+..++
T Consensus 226 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 302 (353)
T 2yrr_A 226 RGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKA-R-GFRPYPKAS-PLPTVLVVRPPEGVDADRL 302 (353)
T ss_dssp TCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCEESCSSS-BCTTEEEEECCTTCCHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-C-CCccccCcc-CCCeEEEEECCCCCCHHHH
Confidence 234467888888888888888654 44889999999999999999988 4 888875431 23444456664 4466777
Q ss_pred HHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHH-HHHHHHHhh
Q psy15216 307 LMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEID-FTIKLLKMK 369 (2602)
Q Consensus 307 ~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid-~li~~L~~~ 369 (2602)
.+.| +||.+++|..|.. .+++|++++.+++.+|++ +++++|++.
T Consensus 303 ~~~l~~~gi~v~~g~~~~~-------------------~~~iRi~~~~~~~~~~~~~~~~~~l~~~ 349 (353)
T 2yrr_A 303 VRALYAEGVAVAGGIGPTR-------------------GQVLRLGLMGEGARREAYQAFLKALDRA 349 (353)
T ss_dssp HHHHHHTTEECEECCGGGT-------------------TTCEEEECSGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEeCCccccC-------------------CCeEEEecCccCCHHHHHHHHHHHHHHH
Confidence 7777 7999998875532 278999998888999999 999999864
No 63
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.95 E-value=2.1e-27 Score=313.13 Aligned_cols=307 Identities=18% Similarity=0.230 Sum_probs=253.0
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCcEE-EeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEE
Q psy15216 37 WTAEKAIEKARNEVAQLIYADPREII-WTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTY 115 (2602)
Q Consensus 37 ~~~~~~~~~~r~~lA~~~g~~~~~Iv-~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~ 115 (2602)
....+..+++++++++++|+++++++ +++|+|+|+++++.++. ++||+|++++++|+++. ....++..|++++.
T Consensus 40 ~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~----~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~ 114 (416)
T 3isl_A 40 PAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVI----EPEDDVLIPIYGRFGYL-LTEIAERYGANVHM 114 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHC----CTTCEEEEEESSHHHHH-HHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhc----CCCCEEEEecCCcccHH-HHHHHHhcCCeeEE
Confidence 34467789999999999999877665 99999999999999987 89999999999998832 23344566999999
Q ss_pred eccCCCCccChHHHHhhcc-CCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccccccCCCCCccEEEe
Q psy15216 116 LKPKNNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSF 194 (2602)
Q Consensus 116 v~~~~~~~ld~e~l~~~i~-~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~ 194 (2602)
++.++++.+|+++|+++++ +++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+..++++..+++|++++
T Consensus 115 v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~ 194 (416)
T 3isl_A 115 LECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIG 194 (416)
T ss_dssp EECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEEC
T ss_pred EecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEe
Confidence 9999888999999999998 689999999999999999999999999999999999999999999888888889999999
Q ss_pred cccc-ccCCCCcEEEEEecCCCCccccee---cCC------------C----------------ccccccccCcchhHHH
Q psy15216 195 SAHK-IYGPKGIGALYIRRNPRTRIEAQI---HGG------------G----------------HEYGLRSGTLATHQIV 242 (2602)
Q Consensus 195 S~~K-~~Gp~G~G~l~~~~~~~~~l~~~~---~g~------------~----------------~~~~~~~gt~~~~~~~ 242 (2602)
|+|| ++|+.|+|++++++++++.+.+.. .|| . ...++..++++...++
T Consensus 195 s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (416)
T 3isl_A 195 GTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLY 274 (416)
T ss_dssp CSSSTTCCCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHH
T ss_pred cCccccCCCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHH
Confidence 9999 689999999999988766655321 111 0 1334567899999999
Q ss_pred HHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc-ccChhHHHHHh--C-CeEEcc
Q psy15216 243 GMGEAFRLARIE-MKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGESLLMAI--K-DIAVSS 317 (2602)
Q Consensus 243 al~~al~~~~~~-~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~L--~-gI~v~~ 317 (2602)
++.++++..... +++..+++.++++++.+.|.+ +++++..++....+.+..+.++ ..+..++.+.| + ||.+++
T Consensus 275 a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~ 352 (416)
T 3isl_A 275 ALREGVRLVLEEGLETRFERHRHHEAALAAGIKA--MGLRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIAS 352 (416)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--cCCEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEec
Confidence 999999865544 899999999999999999988 4888776654444566667765 45677787777 4 999987
Q ss_pred cccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHH-HHHHHHHHHhh
Q psy15216 318 GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE-IDFTIKLLKMK 369 (2602)
Q Consensus 318 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~ed-id~li~~L~~~ 369 (2602)
|.... .++++||+++.+++.+| +++++++|++.
T Consensus 353 g~~~~-------------------~~~~iRi~~~~~~~~~e~i~~~~~~l~~~ 386 (416)
T 3isl_A 353 SFGPL-------------------AGKIWRIGTMGYSCRKENVLFVLAGLEAV 386 (416)
T ss_dssp CCSTT-------------------TTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CCCCC-------------------CCCEEEEecccCCCcHHHHHHHHHHHHHH
Confidence 75321 13799999977777777 99999999964
No 64
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.95 E-value=1.5e-26 Score=298.81 Aligned_cols=331 Identities=14% Similarity=0.124 Sum_probs=259.4
Q ss_pred ccCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHhhhh
Q psy15216 1398 FKDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAH 1476 (2602)
Q Consensus 1398 L~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~-~~~iv~t~gaT~al~~al~~l~~ 1476 (2602)
++....+.++.+++++.+.+..... +.+.....+....+++++++++++|.+ ++++++|+|+|+|+++++.++.
T Consensus 8 ~~p~p~~~~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~- 82 (362)
T 3ffr_A 8 FTPGPSELYPTVRQHMITALDEKIG----VISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV- 82 (362)
T ss_dssp ECSSSCCCCTTHHHHHHHHHHTTTT----TSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC-
T ss_pred ccCCCcCCCHHHHHHHHHHhcCCcc----CcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc-
Confidence 3445567788999998888765220 011224455678899999999999984 5789999999999999999987
Q ss_pred hhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHH
Q psy15216 1477 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 1556 (2602)
Q Consensus 1477 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ 1556 (2602)
++ .+++..+.|++. .....++..|++++.++.+.++.+|+++|+ ++++|++|++++++||||.++|+++|.+
T Consensus 83 ---~~--~~i~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~i~~ 154 (362)
T 3ffr_A 83 ---EK--KSFHCVNGSFSK-RFYEFAGELGREAYKEEAAFGKGFYPADIT--VPADAEIICLTHNETSSGVSMPVEDINT 154 (362)
T ss_dssp ---SS--EEEEEECSHHHH-HHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CCTTCCEEEEESEETTTTEECCHHHHTT
T ss_pred ---CC--cEEEEcCcHHHH-HHHHHHHHhCCCeEEEecCCCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCCHHHHHH
Confidence 56 555544444442 223345566999999999888889999999 8899999999999999999999999999
Q ss_pred Hhhhc-CCEEEEecccccCcccccCCCCCccEEEEccccccC-CCceEEEEEecCCCCccccccccCCcc----------
Q psy15216 1557 LCRSK-GVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGHE---------- 1624 (2602)
Q Consensus 1557 ia~~~-gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~g-p~G~G~l~~~~~~~~~l~~~~~g~~~~---------- 1624 (2602)
+|++| |+++|+|++|+.+..++++.. +|++++|+||+++ |+|+|++++++++++.+.+...|++..
T Consensus 155 la~~~p~~~li~D~a~~~~~~~~~~~~--~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 232 (362)
T 3ffr_A 155 FRDKNKDALIFVDAVSSLPYPKFDWTK--IDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSML 232 (362)
T ss_dssp SGGGSTTSEEEEECTTTTTSSCCCTTS--CSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHH
T ss_pred HHHhCCCCEEEEecccccCCcccChhH--CcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHHHHH
Confidence 99999 999999999999987777654 8999999999766 999999999988777666554433211
Q ss_pred ----ccCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCC-CCCCceEEEEEecCC
Q psy15216 1625 ----YGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN-NRIPHNLNISFNFIE 1698 (2602)
Q Consensus 1625 ----~~~~~gt~~~~~~~al~~aL~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~-~~~~~~~~~~~~~~~ 1698 (2602)
.....++++...+.++..++++.. .+++++.+++.++++++++.|.+ .|++.+..+.. ...+....+.++. +
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~-~ 310 (362)
T 3ffr_A 233 EKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIES-SKVFSFGVEDAKLRSMTTIVANTTM-L 310 (362)
T ss_dssp HHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-CSSEEESSSCGGGBCSSEEEEEESS-C
T ss_pred HHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH-ccCceeccCChhhcCCceEEEecCC-C
Confidence 122367889999999988988543 45889999999999999999987 78999876322 2334455555555 6
Q ss_pred cHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1699 GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1699 ~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
..++...| +||.+++|..+.. .+++|+|++.+++.+++++++++|++
T Consensus 311 ~~~~~~~l~~~gi~~~~g~~~~~-------------------~~~iRis~~~~~~~e~i~~l~~~l~~ 359 (362)
T 3ffr_A 311 PGEINKILEPFDMAVGAGYGSKK-------------------ETQIRIANFPAHSLEQVHKLVQTLKE 359 (362)
T ss_dssp HHHHHHHHGGGTEEEEECSGGGT-------------------TTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEecCccccC-------------------CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 67777766 7999998865433 27899999999999999999999986
No 65
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.95 E-value=3.4e-27 Score=311.03 Aligned_cols=307 Identities=18% Similarity=0.226 Sum_probs=251.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEE-EeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEE
Q psy15216 1433 WTAEKAIEKARNEVAQLIYADPREII-WTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTY 1511 (2602)
Q Consensus 1433 ~~~~~~~~~lr~~ia~~~g~~~~~iv-~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~ 1511 (2602)
....+...++++++++++|+++++++ +++|+|+|+..++.++. ++||+|++++++|+++. ....++..|++++.
T Consensus 40 ~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~----~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~ 114 (416)
T 3isl_A 40 PAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVI----EPEDDVLIPIYGRFGYL-LTEIAERYGANVHM 114 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHC----CTTCEEEEEESSHHHHH-HHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhc----CCCCEEEEecCCcccHH-HHHHHHhcCCeeEE
Confidence 34567789999999999999877665 89999999999999886 89999999999998732 23334556999999
Q ss_pred eccCCCCCcChhHHHhhcc-CCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEE
Q psy15216 1512 LKPKNNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSF 1590 (2602)
Q Consensus 1512 v~~~~~~~id~d~l~~~i~-~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~ 1590 (2602)
++.++++.+|+++|+++++ ++|++|++++++||||.+.|+++|.++|++||+++|+|++|+.|..++++..+++|++++
T Consensus 115 v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~ 194 (416)
T 3isl_A 115 LECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIG 194 (416)
T ss_dssp EECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEEC
T ss_pred EecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEe
Confidence 9999888999999999998 699999999999999999999999999999999999999999999888888889999999
Q ss_pred cccc-ccCCCceEEEEEecCCCCcccccc---ccC----------------------------CccccCCCCCcchhHHH
Q psy15216 1591 SAHK-IYGPKGIGALYIRRNPRTRIEAQI---HGG----------------------------GHEYGLRSGTLATHQIV 1638 (2602)
Q Consensus 1591 S~~K-~~gp~G~G~l~~~~~~~~~l~~~~---~g~----------------------------~~~~~~~~gt~~~~~~~ 1638 (2602)
|+|| ++||.|+|++++++++++.+.+.. .|| .....+..++++...+.
T Consensus 195 s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (416)
T 3isl_A 195 GTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLY 274 (416)
T ss_dssp CSSSTTCCCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHH
T ss_pred cCccccCCCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHH
Confidence 9999 689999999999987665544321 011 12345567899999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe-cCCcHHHHHhc--C-CEEEcc
Q psy15216 1639 GMGEAFRLARIE-MKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGESLLMAI--K-DIAVSS 1713 (2602)
Q Consensus 1639 al~~aL~~~~~~-~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~L--~-gI~v~~ 1713 (2602)
++.++++..... +++..+++.++++++.+.|.+ +++.+..+.....+.+..+.++ ..+..++...| + ||.+++
T Consensus 275 a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~ 352 (416)
T 3isl_A 275 ALREGVRLVLEEGLETRFERHRHHEAALAAGIKA--MGLRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIAS 352 (416)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--cCCEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEec
Confidence 999999866554 899999999999999999998 4777765544334556666665 45667777766 4 999987
Q ss_pred ccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHH-HHHHHHHHHHh
Q psy15216 1714 GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE-IDFTIKLLKMK 1765 (2602)
Q Consensus 1714 g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~ed-id~li~~L~~~ 1765 (2602)
|..... .+++|++++.+++.+| +++++++|++.
T Consensus 353 g~~~~~-------------------~~~iRi~~~~~~~~~e~i~~~~~~l~~~ 386 (416)
T 3isl_A 353 SFGPLA-------------------GKIWRIGTMGYSCRKENVLFVLAGLEAV 386 (416)
T ss_dssp CCSTTT-------------------TTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CCCCCC-------------------CCEEEEecccCCCcHHHHHHHHHHHHHH
Confidence 763221 3799999988777777 99999999974
No 66
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.95 E-value=4.5e-27 Score=309.29 Aligned_cols=330 Identities=17% Similarity=0.216 Sum_probs=263.2
Q ss_pred CCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCc-EEEeCCHHHHHHHHHHhccccc
Q psy15216 4 SATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE-IIWTSGATESNNLAIKGAAHFY 82 (2602)
Q Consensus 4 a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~-Iv~t~g~T~al~~~~~~l~~~~ 82 (2602)
.+..++++.+.+++.+.+. . ..........+++++++++++|+++++ +++++|+++|+++++.++.
T Consensus 19 pgp~~~~~~v~~a~~~~~~----~------~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~--- 85 (411)
T 3nnk_A 19 PGPINADPRVLRAMSSQLI----G------QYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAI--- 85 (411)
T ss_dssp SSCCCCCHHHHHHHTSCCC----C------TTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCCCHHHHHHhhcccc----c------cccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhc---
Confidence 3445677777777664321 0 112334467899999999999997665 8899999999999999987
Q ss_pred ccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCcccccccHHHHHHH
Q psy15216 83 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGEL 161 (2602)
Q Consensus 83 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l~~I~~l 161 (2602)
++||+|+++.++|++.. ....++..|++++.++.+.++.+|+++|++++++ ++++|++++++||||.+.|+++|.++
T Consensus 86 -~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l 163 (411)
T 3nnk_A 86 -RPGDKVLVPVFGRFGHL-LCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEI 163 (411)
T ss_dssp -CTTCEEEEEECSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHH
T ss_pred -CCCCEEEEecCCchHHH-HHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHH
Confidence 89999999999998732 3344455699999999988888999999999986 89999999999999999999999999
Q ss_pred HHhcCCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCccccee------cCCCc-------
Q psy15216 162 CRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQI------HGGGH------- 227 (2602)
Q Consensus 162 a~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~~------~g~~~------- 227 (2602)
|++||+++|+|++|+.+..++++..+++|++++|+|| ++|+.|+|++++++++++.+.+.. .|++.
T Consensus 164 ~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~ 243 (411)
T 3nnk_A 164 CRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEM 243 (411)
T ss_dssp HHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCC
T ss_pred HHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccccccCCC
Confidence 9999999999999999998888888899999999999 589999999999988765544321 11110
Q ss_pred ----------------cccccccCcchhHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCC
Q psy15216 228 ----------------EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRI 290 (2602)
Q Consensus 228 ----------------~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~ 290 (2602)
..++..++++..+++++.++++.... ++++..+++.++++++.+.|.+ .++++..++....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~ 321 (411)
T 3nnk_A 244 IYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQA--MGLETFGDLKHKM 321 (411)
T ss_dssp CSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCBCSCGGGBC
T ss_pred CcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--cCCEeCCCccccc
Confidence 23456689999999999899986544 4889999999999999999988 3777776554444
Q ss_pred CceEEEEEc-ccChhHHHHHh--C-CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec-CCCCCHHHHHHHHHH
Q psy15216 291 PHNLNISFN-FIEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFTIKL 365 (2602)
Q Consensus 291 ~~~~~~~~~-~~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~-~~~~t~edid~li~~ 365 (2602)
+.+..+.++ ..+..++...| + ||.+++|.... ..+++||++ +..++++|+++++++
T Consensus 322 ~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~-------------------~~~~iRi~~~~~~~~~~~i~~~~~~ 382 (411)
T 3nnk_A 322 NNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPL-------------------HGKVWRIGTMGYNARKDCVMTTLSA 382 (411)
T ss_dssp SSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGG-------------------TTTEEEEECCGGGCSHHHHHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCC-------------------CCCEEEEeCccCcCCHHHHHHHHHH
Confidence 566667765 45677777766 4 99999774321 137999998 666789999999999
Q ss_pred HHhh
Q psy15216 366 LKMK 369 (2602)
Q Consensus 366 L~~~ 369 (2602)
|++.
T Consensus 383 l~~~ 386 (411)
T 3nnk_A 383 LEAV 386 (411)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9964
No 67
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.95 E-value=4.7e-27 Score=307.07 Aligned_cols=331 Identities=15% Similarity=0.196 Sum_probs=262.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHhcc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~-~Iv~t~g~T~al~~~~~~l~ 79 (2602)
||+++.+++++.+.+++.+.+.. + ++....+..+++++++++++|++++ ++++|+|+|+|+++++.++.
T Consensus 37 l~~~~~~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~ 106 (393)
T 1vjo_A 37 LLGPGPSNAHPSVLQAMNVSPVG-----H-----LDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAV 106 (393)
T ss_dssp ECSSSCCCCCHHHHHHHSSCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC
T ss_pred eccCCCCCCCHHHHHHHhccccc-----c-----cCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhcc
Confidence 46777788999999888775532 1 1223556889999999999999888 89999999999999999987
Q ss_pred cccccCCCEEEEcCCCCcc--cHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCcccccccHH
Q psy15216 80 HFYKKRGKHIITVQTEHKS--VLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPIL 156 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s--~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l~ 156 (2602)
++||+|+++.+.|++ +...+ +..|++++.++.++++.+|+++|++++++ ++++|++++++||||.+.|++
T Consensus 107 ----~~gd~Vl~~~~~~~~~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~ 179 (393)
T 1vjo_A 107 ----EPGDVVLIGVAGYFGNRLVDMA---GRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLE 179 (393)
T ss_dssp ----CTTCEEEEEESSHHHHHHHHHH---HHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCT
T ss_pred ----CCCCEEEEEcCChhHHHHHHHH---HHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHH
Confidence 799999999999998 44433 44599999999988888999999999988 899999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccc-cCCCCcEEEEEecCCCCcccce---ecCCCc-----
Q psy15216 157 EIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKI-YGPKGIGALYIRRNPRTRIEAQ---IHGGGH----- 227 (2602)
Q Consensus 157 ~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~-~Gp~G~G~l~~~~~~~~~l~~~---~~g~~~----- 227 (2602)
+|.++|++||+++|+|++|++|..++++..+++|++++|+||+ .+|.|+|++++++++++.+... ..++..
T Consensus 180 ~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (393)
T 1vjo_A 180 GVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLL 259 (393)
T ss_dssp THHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHH
T ss_pred HHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecCcHhh
Confidence 9999999999999999999988888888778899999999994 5566799999998766554211 111100
Q ss_pred -----cccccccCcchhHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc-c
Q psy15216 228 -----EYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-F 300 (2602)
Q Consensus 228 -----~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~-~ 300 (2602)
...+..|+++...++++.++++.. ..++++..+++.++++++.+.|.+ . ++++..+.....+.+..+.++ .
T Consensus 260 ~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
T 1vjo_A 260 GKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLED-I-GLSLHVEKEYRLPTLTTVCIPDG 337 (393)
T ss_dssp HHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCGGGBCSSEEEEECCTT
T ss_pred hhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH-c-CCcccCCccccCCcEEEEEcCCC
Confidence 112233488888898888999864 346789999999999999999988 4 777765533223445556654 3
Q ss_pred cChhHHHHHh--C-CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec-CCCCCHHHHHHHHHHHHhh
Q psy15216 301 IEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 301 ~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~-~~~~t~edid~li~~L~~~ 369 (2602)
.+..++...| + ||.+++|..+.. .+++||++ ++.++++++++++++|++.
T Consensus 338 ~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~~~~~~~~~i~~~~~~l~~~ 391 (393)
T 1vjo_A 338 VDGKAVARRLLNEHNIEVGGGLGELA-------------------GKVWRVGLMGFNSRKESVDQLIPALEQV 391 (393)
T ss_dssp CCHHHHHHHHHHHHCEECEECCGGGT-------------------TTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhhCCEEEecCccccC-------------------CCEEEEeCCccCChHHHHHHHHHHHHHH
Confidence 4666777777 5 999998876533 27899995 4456777899999999853
No 68
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.95 E-value=4.1e-27 Score=306.67 Aligned_cols=329 Identities=15% Similarity=0.189 Sum_probs=260.7
Q ss_pred cCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCC--CcEEEeCCHHHHHHHHHHhhhh
Q psy15216 1399 KDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP--REIIWTSGATESNNLAIKGAAH 1476 (2602)
Q Consensus 1399 ~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~--~~iv~t~gaT~al~~al~~l~~ 1476 (2602)
.....+.++.+++++.+.+.. + .++.......++++++++++|+++ +++++|+|+|+|++ ++.++.
T Consensus 7 ~~gp~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~- 74 (384)
T 3zrp_A 7 HVGPTTIKEDVLVAGLENNVG-----F-----TSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLL- 74 (384)
T ss_dssp CSSCSCCCHHHHHHTTCCSCC-----T-----TSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGC-
T ss_pred cCCCCCCCHHHHHHhhccccc-----c-----ccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhc-
Confidence 345567788888887665421 1 133456788999999999999987 78999999999999 888775
Q ss_pred hhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEeccccccccccChHHHH
Q psy15216 1477 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIG 1555 (2602)
Q Consensus 1477 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~~~~l~~I~ 1555 (2602)
++||+|+++++.|++. .....+...|++++.++.++++.+|++++++++++ ++++|++++++||||.++|+++|.
T Consensus 75 ---~~gd~vi~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~ 150 (384)
T 3zrp_A 75 ---KPNDKILVVSNGVFGD-RWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVI 150 (384)
T ss_dssp ---CTTCEEEEECSSHHHH-HHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHH
T ss_pred ---CCCCEEEEecCCcchH-HHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHH
Confidence 8999999999998773 22333456699999999998888999999999987 899999999999999999999999
Q ss_pred HHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCcc-cccc-----------ccCC
Q psy15216 1556 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRI-EAQI-----------HGGG 1622 (2602)
Q Consensus 1556 ~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l-~~~~-----------~g~~ 1622 (2602)
++|++||+++|+|++|+.+..+.++..+++|++++|+|| ++|+.|+|+++++++.++.+ .+.. ..+.
T Consensus 151 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (384)
T 3zrp_A 151 NKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVM 230 (384)
T ss_dssp HHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHH
T ss_pred HHHHhcCCEEEEECcccccCccccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHH
Confidence 999999999999999999998888888889999999999 56788999999998776555 2100 0000
Q ss_pred cc----ccCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC-CCCCCceEEEEEec
Q psy15216 1623 HE----YGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDM-NNRIPHNLNISFNF 1696 (2602)
Q Consensus 1623 ~~----~~~~~gt~~~~~~~al~~aL~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~-~~~~~~~~~~~~~~ 1696 (2602)
.. .....|+++...+.++.++++... .+++++.+++.++++++.+.|.+ . ++.+..+. ....+.+..+.++.
T Consensus 231 ~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~ 308 (384)
T 3zrp_A 231 RGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEA-L-GLEIVARRPESYSNTVTGVILKV 308 (384)
T ss_dssp HHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSCSSGGGBCSSEEEEECSS
T ss_pred HhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-C-CCeEccCcccccCccEEEEECCC
Confidence 00 223336889999999989998655 44889999999999999999988 4 77666543 22234455566665
Q ss_pred CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1697 IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1697 ~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.+..++...| +||.+++|..+.. +++|++++.++|.+|+++++++|++.
T Consensus 309 ~~~~~~~~~l~~~gi~v~~g~~~~~--------------------~~iRi~~~~~~~~e~i~~~~~~l~~~ 359 (384)
T 3zrp_A 309 ADPQKVLAGTVNEGVEFAPGVHPAF--------------------KYFRIGHMGWVTPNDAIIAISVIERT 359 (384)
T ss_dssp SCHHHHHHHHHTTTCCCEECCCTTC--------------------CEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCEEEecCCCCCc--------------------CEEEEeccccCCHHHHHHHHHHHHHH
Confidence 5666777766 7898887764311 68999999999999999999999974
No 69
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.95 E-value=1.9e-26 Score=300.67 Aligned_cols=334 Identities=15% Similarity=0.188 Sum_probs=259.3
Q ss_pred eeccC-CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHh
Q psy15216 1396 IVFKD-ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKG 1473 (2602)
Q Consensus 1396 v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~-~~~iv~t~gaT~al~~al~~ 1473 (2602)
+|++. +..+.++.+.+++.+.+.. + ++.......+++++++++++|++ ++++++|+|+|+|+..++.+
T Consensus 21 ~~l~~~~~~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~ 90 (386)
T 2dr1_A 21 YKLFTAGPVACFPEVLEIMKVQMFS-----H-----RSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRN 90 (386)
T ss_dssp SEECCSSSCCCCHHHHHHTTSCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHH
T ss_pred ceeecCCCcCCcHHHHHHHhccccc-----c-----cCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHH
Confidence 55653 4456778888777654421 1 12234678899999999999997 66799999999999999999
Q ss_pred hhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhc--cCCceEEEEeccccccccccCh
Q psy15216 1474 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKI--CSDTILVSVMLVNNEIGVIQPI 1551 (2602)
Q Consensus 1474 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i--~~~t~lv~l~~~~n~tG~~~~l 1551 (2602)
+. ++||+|++++++|++.. ....+...|++++.++.++++.+|+++|++++ ++++++|++++++||||.+.|+
T Consensus 91 l~----~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l 165 (386)
T 2dr1_A 91 GV----SKGGKVLVTIIGAFGKR-YKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPL 165 (386)
T ss_dssp HS----CTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCH
T ss_pred hh----cCCCeEEEEcCCchhHH-HHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCH
Confidence 86 79999999999999831 22333445999999999888889999999999 6789999999999999999999
Q ss_pred HHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccccc-CCCceEEEEEecCCCCcccccc-ccCC-------
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIY-GPKGIGALYIRRNPRTRIEAQI-HGGG------- 1622 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~-gp~G~G~l~~~~~~~~~l~~~~-~g~~------- 1622 (2602)
++|.++|++||+++|+|++|+.+..++++..+++|++++|+||++ +|.|+|++++++++++.+.+.. .++.
T Consensus 166 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (386)
T 2dr1_A 166 PELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLYV 245 (386)
T ss_dssp HHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHHH
T ss_pred HHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHHH
Confidence 999999999999999999999988777777778999999999955 4668999999987655553211 0110
Q ss_pred --cc-ccCCCCCcchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe-c
Q psy15216 1623 --HE-YGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-F 1696 (2602)
Q Consensus 1623 --~~-~~~~~gt~~~~~~~al~~aL~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~-~ 1696 (2602)
.. .....++++...+.++.++|+.... ++++..+++.++++++.+.|.+ . ++.+..+.....+.+..+.++ +
T Consensus 246 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~ 323 (386)
T 2dr1_A 246 KYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVRE-I-GLDILAEPGHESPTITAVLTPPG 323 (386)
T ss_dssp HHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCTTCBCSSEEEEECCTT
T ss_pred HhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-c-CCeeCcCccccCCceEEEEcCCC
Confidence 00 1345678888888888889986554 4788999999999999999988 4 776654432223444455555 3
Q ss_pred CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1697 IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1697 ~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.+..++...| +||.+++|..+.. .+++||+++.++|.+|+++++++|++.
T Consensus 324 ~~~~~~~~~l~~~gi~v~~~~~~~~-------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~ 375 (386)
T 2dr1_A 324 IKGDEVYEAMRKRGFELAKGYGSVK-------------------EKTFRIGHMGYMKFEDIQEMLDNLREV 375 (386)
T ss_dssp CCHHHHHHHHHHTTEECEECCGGGT-------------------TTEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCeEEecCccccC-------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4556676666 7999988774322 278999999999999999999999974
No 70
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.95 E-value=2.8e-27 Score=306.69 Aligned_cols=335 Identities=13% Similarity=0.162 Sum_probs=255.1
Q ss_pred CCC-CCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHH-HHHHhCCCCCcEEEeCCHHHHHHHHHHhc
Q psy15216 1 MDY-SATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNE-VAQLIYADPREIIWTSGATESNNLAIKGA 78 (2602)
Q Consensus 1 Ld~-a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~-lA~~~g~~~~~Iv~t~g~T~al~~~~~~l 78 (2602)
||+ ++.+++++.+.+++.+.+...........+..++...+..++++++ +++++|.+ +|++++|+|+|+++++.++
T Consensus 12 ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a~~~~~~~~ 89 (371)
T 2e7j_A 12 IDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD--VARVTNGAREAKFAVMHSL 89 (371)
T ss_dssp CCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS--EEEEESSHHHHHHHHHHHH
T ss_pred ecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC--EEEEeCChHHHHHHHHHHH
Confidence 455 4467889999999998876432100000122333445578899999 99999987 9999999999999999998
Q ss_pred ccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEec--cCCCCccChHHHHhhcc-----CCceEEEEecccCcccc
Q psy15216 79 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLK--PKNNGLITLSQLEEKIC-----SDTILVSVMLVNNEIGV 151 (2602)
Q Consensus 79 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~--~~~~~~ld~e~l~~~i~-----~~tklv~i~~~~npTG~ 151 (2602)
. ++||+|++++++|+++...+.. .|++++.++ .++++.+|+++|+++++ +++++|++++++||||.
T Consensus 90 ~----~~gd~vl~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~ 162 (371)
T 2e7j_A 90 A----KKDAWVVMDENCHYSSYVAAER---AGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGN 162 (371)
T ss_dssp C----CTTCEEEEETTCCHHHHHHHHH---TTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCC
T ss_pred h----CCCCEEEEccCcchHHHHHHHH---cCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcc
Confidence 7 7999999999999998877544 499999999 77778899999999998 78999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCc-ccceecCCCccc
Q psy15216 152 IQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTR-IEAQIHGGGHEY 229 (2602)
Q Consensus 152 ~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~-l~~~~~g~~~~~ 229 (2602)
++|+++|.++|++||+++|+|++|+.+..++++..+++|++++|+|| ++++.|+|++++++++++. +.+...++....
T Consensus 163 ~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 242 (371)
T 2e7j_A 163 LPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEV 242 (371)
T ss_dssp CCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBG
T ss_pred cCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccccCccccc
Confidence 99999999999999999999999999887766666678999999999 5566679999999998888 776554333333
Q ss_pred cccccCcchhHHHHHHHHHHHHHHhHHHHHHHH--HHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHH
Q psy15216 230 GLRSGTLATHQIVGMGEAFRLARIEMKEELKRI--LFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLL 307 (2602)
Q Consensus 230 ~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~--~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (2602)
.+..++++..+++++.+++++... +..++. +++++++.+.|.+ . ++.+..+.... ..++.+.++ +..++.
T Consensus 243 ~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~~~-~~~~~~~~~--~~~~~~ 314 (371)
T 2e7j_A 243 ELLGCTARGATIITLMASFPHVRE---RIKRWDEEVEKARRFAAEMEK-L-GIKQLGDNPHN-HDLMFFHAE--VLYEIS 314 (371)
T ss_dssp GGTTCCCCSHHHHHHHHHHHHHHH---HGGGHHHHHHHHHHHHHHHHH-T-TCEEESSSSCC-SSEEEEECH--HHHHHH
T ss_pred ccccCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH-c-CcEEecCCCcc-CceEEEECC--CHHHHH
Confidence 344788888888888888875543 566777 8889999999987 4 88887654221 334455554 556677
Q ss_pred HHh--CCeEEcccccCCCCCCChHHHHHHc---CCCccCCCCeEE-EecCCC-CCHHHHHHHHHHHHhh
Q psy15216 308 MAI--KDIAVSSGSACTSASLEPSYVLRAL---GCNDELAHSSIR-FTIGRF-TTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 308 ~~L--~gI~v~~g~~~~~~~~~~~~~~~~~---g~~~~~~~~~iR-is~~~~-~t~edid~li~~L~~~ 369 (2602)
+.| +||.+++ ..+ .. |.. ++++| ++++.+ ++++|+++++++|++.
T Consensus 315 ~~l~~~gi~~~~-~~~------------~~~~~g~~----~~~iRii~~~~~~~~~~~i~~~~~~l~~~ 366 (371)
T 2e7j_A 315 KKAKGGRFFLYR-ELK------------SRKIHGIK----PGLTRYFKLSTYGLSDEEVDYVLNAFKEI 366 (371)
T ss_dssp HHSSSGGGHHHH-HHH------------HTTEECSC----TTCCSEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEEe-ccc------------cccccCCC----CCceEEEEeeccCCCHHHHHHHHHHHHHH
Confidence 776 5676654 111 11 211 37899 999988 9999999999999864
No 71
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.95 E-value=9.3e-27 Score=306.31 Aligned_cols=332 Identities=17% Similarity=0.226 Sum_probs=262.8
Q ss_pred ccCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCc-EEEeCCHHHHHHHHHHhhhh
Q psy15216 1398 FKDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE-IIWTSGATESNNLAIKGAAH 1476 (2602)
Q Consensus 1398 L~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~-iv~t~gaT~al~~al~~l~~ 1476 (2602)
+.....+.++.+.+++.+.+. . + ..+.......++++++++++|+++++ +++++|+|+|++.++.++.
T Consensus 17 ~~pgp~~~~~~v~~a~~~~~~---~--~-----~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~- 85 (411)
T 3nnk_A 17 MGPGPINADPRVLRAMSSQLI---G--Q-----YDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAI- 85 (411)
T ss_dssp ESSSCCCCCHHHHHHHTSCCC---C--T-----TCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHC-
T ss_pred ecCCCCCCCHHHHHHhhcccc---c--c-----ccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhc-
Confidence 344556777888877764321 0 1 12344567899999999999997666 7889999999999999986
Q ss_pred hhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEeccccccccccChHHHH
Q psy15216 1477 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIG 1555 (2602)
Q Consensus 1477 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~~~~l~~I~ 1555 (2602)
++||+|+++.++|++.. ....+...|++++.++.+.++.+|+++|++++++ ++++|++++++||||.+.|+++|.
T Consensus 86 ---~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~ 161 (411)
T 3nnk_A 86 ---RPGDKVLVPVFGRFGHL-LCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELG 161 (411)
T ss_dssp ---CTTCEEEEEECSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHH
T ss_pred ---CCCCEEEEecCCchHHH-HHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHH
Confidence 89999999999998732 2334455599999999988888999999999986 999999999999999999999999
Q ss_pred HHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCcccc------ccccCCc-----
Q psy15216 1556 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEA------QIHGGGH----- 1623 (2602)
Q Consensus 1556 ~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~------~~~g~~~----- 1623 (2602)
++|++||+++|+|++|+.+..++++..+++|++++|+|| ++||.|+|++++++++++.+.+ .+.|+..
T Consensus 162 ~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~ 241 (411)
T 3nnk_A 162 EICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDE 241 (411)
T ss_dssp HHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSS
T ss_pred HHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccccccC
Confidence 999999999999999999998888888899999999999 6899999999999876544332 2222211
Q ss_pred ------------------cccCCCCCcchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCC
Q psy15216 1624 ------------------EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN 1684 (2602)
Q Consensus 1624 ------------------~~~~~~gt~~~~~~~al~~aL~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~ 1684 (2602)
..++..++++...+.++.++++.... ++++..+++.++++++.+.|.+ .++.+..+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~ 319 (411)
T 3nnk_A 242 EMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQA--MGLETFGDLKH 319 (411)
T ss_dssp CCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCBCSCGGG
T ss_pred CCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--cCCEeCCCccc
Confidence 23456788999999999899986554 4889999999999999999988 37776654433
Q ss_pred CCCceEEEEEe-cCCcHHHHHhc--C-CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEec-CCCCCHHHHHHHH
Q psy15216 1685 RIPHNLNISFN-FIEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFTI 1759 (2602)
Q Consensus 1685 ~~~~~~~~~~~-~~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~-~~~~t~edid~li 1759 (2602)
..+....+.++ +.+..++...| + ||.+++|..... .+++|+++ +..+|++|+++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~~~~~~~~i~~~~ 380 (411)
T 3nnk_A 320 KMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPLH-------------------GKVWRIGTMGYNARKDCVMTTL 380 (411)
T ss_dssp BCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGGT-------------------TTEEEEECCGGGCSHHHHHHHH
T ss_pred ccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCCC-------------------CCEEEEeCccCcCCHHHHHHHH
Confidence 44566666665 45666777666 3 999987743221 27899998 6566899999999
Q ss_pred HHHHHh
Q psy15216 1760 KLLKMK 1765 (2602)
Q Consensus 1760 ~~L~~~ 1765 (2602)
++|++.
T Consensus 381 ~~l~~~ 386 (411)
T 3nnk_A 381 SALEAV 386 (411)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999974
No 72
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.95 E-value=7.3e-27 Score=305.68 Aligned_cols=331 Identities=16% Similarity=0.224 Sum_probs=259.3
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHhcccc
Q psy15216 3 YSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAAHF 81 (2602)
Q Consensus 3 ~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~-~Iv~t~g~T~al~~~~~~l~~~ 81 (2602)
+.+..++++.+.+++.+.+.. + ++..+....+++|+++++++|.+++ +|++|+|+|+|+++++.++.
T Consensus 23 ~~~p~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~-- 90 (396)
T 2ch1_A 23 GPGPSNCSKRVLTAMTNTVLS-----N-----FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLL-- 90 (396)
T ss_dssp SSSSCCCCHHHHHHTTSCCCC-----T-----TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC--
T ss_pred cCCCCCCCHHHHHHhcccccc-----C-----CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhc--
Confidence 444456778888777654321 0 1223345688999999999999887 89999999999999999987
Q ss_pred cccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCcccccccHHHHHH
Q psy15216 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGE 160 (2602)
Q Consensus 82 ~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l~~I~~ 160 (2602)
++||+|+++.++|+++. ....++..|++++.++.++++.+|+++|++++++ ++++|++++++||||.++|+++|.+
T Consensus 91 --~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~ 167 (396)
T 2ch1_A 91 --EEGDRVLIAVNGIWAER-AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQ 167 (396)
T ss_dssp --CTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHH
T ss_pred --CCCCeEEEEcCCcccHH-HHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHH
Confidence 79999999999999963 2234456699999999988888999999999987 8999999999999999999999999
Q ss_pred HHHhcCCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCcccce-------ecC-------C
Q psy15216 161 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQ-------IHG-------G 225 (2602)
Q Consensus 161 la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~-------~~g-------~ 225 (2602)
+|++||+++|+|++|++|..++++..+++|++++|+|| ++++.|+|++++++++++.+.+. +.+ +
T Consensus 168 l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (396)
T 2ch1_A 168 ICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYW 247 (396)
T ss_dssp HHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHT
T ss_pred HHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhh
Confidence 99999999999999999988888888889999999999 67788999999988765544321 111 1
Q ss_pred C--ccccccccCcchhHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCC-CCCCceEEEEEc-c
Q psy15216 226 G--HEYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN-NRIPHNLNISFN-F 300 (2602)
Q Consensus 226 ~--~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~-~~~~~~~~~~~~-~ 300 (2602)
. ....+..++++...+.++.++++.. ..++++..++++++++++.+.|.+ + |++++.+.. ...+.++.+.++ +
T Consensus 248 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~ 325 (396)
T 2ch1_A 248 GCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGK-M-GLDIFVKDPRHRLPTVTGIMIPKG 325 (396)
T ss_dssp TCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-H-TCCBSSCSGGGBCTTEEEEECCTT
T ss_pred hhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-C-CCeeccCCccccCCceEEEEcCCC
Confidence 0 1123456788888888888888854 356888999999999999999988 4 777765543 223445556665 4
Q ss_pred cChhHHHHHh--C-CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec-CCCCCHHHHHHHHHHHHhh
Q psy15216 301 IEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 301 ~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~-~~~~t~edid~li~~L~~~ 369 (2602)
.+..++.+.| + ||.+++|..+.. .+++||++ ++.++++|+++++++|++.
T Consensus 326 ~~~~~~~~~L~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~~~~~~e~i~~~~~~l~~~ 379 (396)
T 2ch1_A 326 VDWWKVSQYAMNNFSLEVQGGLGPTF-------------------GKAWRVGIMGECSTVQKIQFYLYGFKES 379 (396)
T ss_dssp CCHHHHHHHHHHHHCBCCBCCCGGGT-------------------TTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEecCccccC-------------------CCEEEEECCCCcCCHHHHHHHHHHHHHH
Confidence 5667777776 3 999987764322 37899999 4566899999999999964
No 73
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.95 E-value=3.2e-26 Score=301.66 Aligned_cols=334 Identities=15% Similarity=0.163 Sum_probs=260.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||+++.+++|+.+.+++.+.+...++++... ..+........+++++++++++|+++++|++|+|+++++.+++.++..
T Consensus 32 ld~~~~~~~~~~v~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~ 110 (416)
T 1qz9_A 32 LDGNSLGARPVAALARAQAVIAEEWGNGLIR-SWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALR 110 (416)
T ss_dssp CCTTTSCCCBTTHHHHHHHHHHTCCCCCGGG-HHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHH
T ss_pred ecCCCcCCCcHHHHHHHHHHHHHHHhccCcc-ccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcc
Confidence 7888888999999999999987644444220 011111235678999999999999888999999999999988887631
Q ss_pred ccc----cCCCE-EEEcCCCCcccHHHHHHH-HhC--CcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCccccc
Q psy15216 81 FYK----KRGKH-IITVQTEHKSVLDSIRKL-END--GFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVI 152 (2602)
Q Consensus 81 ~~~----~~gd~-Vlv~~~~~~s~~~~~~~~-~~~--G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~ 152 (2602)
+ ++||+ |+++.++|+++...+..+ +.. |++++.++. +++|++++++++++|++++++||||.+
T Consensus 111 --~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~~~~~~v~~~~~~nptG~~ 181 (416)
T 1qz9_A 111 --VQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAIDQDTAVVMLTHVNYKTGYM 181 (416)
T ss_dssp --HHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCSTTEEEEEEESBCTTTCBB
T ss_pred --cccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhCCCceEEEEeccccCcccc
Confidence 2 58885 677778999887776554 333 899999885 889999999999999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccc-cCCCCc-EEEEEecCCCCcccceecCCCc---
Q psy15216 153 QPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKI-YGPKGI-GALYIRRNPRTRIEAQIHGGGH--- 227 (2602)
Q Consensus 153 ~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~-~Gp~G~-G~l~~~~~~~~~l~~~~~g~~~--- 227 (2602)
.|+++|.++|++||+++|+|++|+.|..++++..+++|++++|+||+ ++++|+ |++++++++++.+.+...+|..
T Consensus 182 ~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~ 261 (416)
T 1qz9_A 182 HDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSR 261 (416)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCT
T ss_pred cCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCCeEEEEECHHHHhccCCCccccCcccc
Confidence 99999999999999999999999998877766666789999999995 466677 9999999988888775544311
Q ss_pred -------------cccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccC--ceEEeCCCCC-CC
Q psy15216 228 -------------EYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIE--EIYINGDMNN-RI 290 (2602)
Q Consensus 228 -------------~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~--g~~l~~~~~~-~~ 290 (2602)
..++..++++..+++++.++++... .++++..+++.++++++.+.|.+..+ ++.+..+... ..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~ 341 (416)
T 1qz9_A 262 QFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKR 341 (416)
T ss_dssp TSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGB
T ss_pred ccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHc
Confidence 1245677899999999989998654 56888999999999999999987336 8888765321 11
Q ss_pred CceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecC-CCCCHHHHHHHHHHHH
Q psy15216 291 PHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTTEKEIDFTIKLLK 367 (2602)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~-~~~t~edid~li~~L~ 367 (2602)
..++.+.++ +..++.+.| +||.++.. ..+++||+++ .+++++|+++++++|+
T Consensus 342 ~~~~~~~~~--~~~~l~~~l~~~gi~~~~~-----------------------~~~~lRis~~~~~~t~~~i~~~~~~l~ 396 (416)
T 1qz9_A 342 GSHVSFEHP--EGYAVIQALIDRGVIGDYR-----------------------EPRIMRFGFTPLYTTFTEVWDAVQILG 396 (416)
T ss_dssp CSEEEEECT--THHHHHHHHHTTTEECEEE-----------------------TTTEEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCEEEEecC--CHHHHHHHHHhCCcEeccC-----------------------CCCeEEEeCcccCCCHHHHHHHHHHHH
Confidence 233344433 466677666 68776321 1378999998 5899999999999999
Q ss_pred hh
Q psy15216 368 MK 369 (2602)
Q Consensus 368 ~~ 369 (2602)
+.
T Consensus 397 ~~ 398 (416)
T 1qz9_A 397 EI 398 (416)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 74
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.95 E-value=1.6e-26 Score=298.29 Aligned_cols=330 Identities=11% Similarity=0.091 Sum_probs=246.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCC---CcchhhhHHHHHHHHHHHHHHHhCCCCC-c-EEEeCCHHHHHHHHH
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASR---NHIYGWTAEKAIEKARNEVAQLIYADPR-E-IIWTSGATESNNLAI 75 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~---~~~~~~~~~~~~~~~r~~lA~~~g~~~~-~-Iv~t~g~T~al~~~~ 75 (2602)
||+++.+++|+.+++++.+++... .+++.+ ....+.......+++++++++++|++++ + +++|+|+|+|+++++
T Consensus 7 l~~~~~~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~ 85 (362)
T 2c0r_A 7 NFNAGPAALPLEVLERAQAEFVDY-QHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIP 85 (362)
T ss_dssp ECCSSSCCCCHHHHHHHHHTSSSS-TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHH
T ss_pred eccCCCCCCCHHHHHHHHHHHhhh-hhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHH
Confidence 578888999999999999988643 222111 1112344556789999999999999764 6 578899999999999
Q ss_pred HhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC--CC--ccChHHHHhhccCCceEEEEecccCcccc
Q psy15216 76 KGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NG--LITLSQLEEKICSDTILVSVMLVNNEIGV 151 (2602)
Q Consensus 76 ~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~--~ld~e~l~~~i~~~tklv~i~~~~npTG~ 151 (2602)
.++. ++||+|+++.+.|.+. .+...++..| +++.++++. ++ .+|+++++ ++++|++|++++++||||.
T Consensus 86 ~~l~----~~gd~vl~~~~~~~~~-~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~~n~tG~ 157 (362)
T 2c0r_A 86 MNFL----KEGQTANYVMTGSWAS-KALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSNETIEGA 157 (362)
T ss_dssp HHHC----CTTCEEEEEECSHHHH-HHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESEETTTTE
T ss_pred HhcC----CCCCeEEEEecCcHhH-HHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCCcCccce
Confidence 9987 7999999886655442 1223444458 899998762 22 35666664 7889999999999999999
Q ss_pred c-ccHHHHHHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecC---CC-
Q psy15216 152 I-QPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHG---GG- 226 (2602)
Q Consensus 152 ~-~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g---~~- 226 (2602)
+ .|+++| +|+++++|++|+.+..++++.++ |++++|+||++||+|+||+++++++++.+.+.... +.
T Consensus 158 ~~~~l~~i------~~~~vivD~a~~~~~~~~~~~~~--d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~~~~~~~~ 229 (362)
T 2c0r_A 158 QFKAFPDT------GSVPLIGDMSSDILSRPFDLNQF--GLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDT 229 (362)
T ss_dssp ECSSCCCC------TTSCEEEECTTTTTSSCCCGGGC--SEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHH
T ss_pred eccccccc------CCCEEEEEChhhccCCccchhHC--cEEEEeccccccCcCcEEEEEcHHHHhhccccCchHHhHHH
Confidence 6 677776 89999999999999888777654 89999999999999999999999988777542110 00
Q ss_pred -ccccccccCcchhHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhhccCce-EEeCCCCCCCCceEEEEEcc-c
Q psy15216 227 -HEYGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHNLNISFNF-I 301 (2602)
Q Consensus 227 -~~~~~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~g~-~l~~~~~~~~~~~~~~~~~~-~ 301 (2602)
.......+|++...++++.+|++.... +++++.++++++++++++.|.+ ++++ .+..++..+.+..+.+.++. .
T Consensus 230 ~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (362)
T 2c0r_A 230 YVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQ-SGGFYRGCVDVDSRSDMNITFRLASEE 308 (362)
T ss_dssp HHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT-STTSSEESSCGGGBCSSEEEEECSCHH
T ss_pred HhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-cCCccccCCChHHcCCcEEEEEcCCcc
Confidence 011234578999999999999996554 6899999999999999999987 4435 76543322233444444442 3
Q ss_pred ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 302 EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 302 ~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+..++...| +||.+.+|..+ .+++|||++.+++++|+++++++|++.
T Consensus 309 ~~~~~~~~L~~~gi~~~~g~~~---------------------~~~iRis~~~~~~~e~i~~l~~~l~~~ 357 (362)
T 2c0r_A 309 LEKEFVKASEQEGFVGLKGHRS---------------------VGGLRASIYNAVPYESCEALVQFMEHF 357 (362)
T ss_dssp HHHHHHHHHHHTTEESCBCCTT---------------------TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCeeccCCCC---------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 456677777 78977665432 156999999999999999999999863
No 75
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.95 E-value=9.4e-27 Score=299.44 Aligned_cols=329 Identities=15% Similarity=0.157 Sum_probs=259.5
Q ss_pred ccCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1398 FKDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1398 L~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~--~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
+..+..+.++.+++++.+.+.. +. ++.......++|+++++++|++ ++++++|+|+|+|++.++.++.
T Consensus 4 ~~~gp~~~~~~v~~a~~~~~~~-----~~-----~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~ 73 (353)
T 2yrr_A 4 LTPGPTPIPERVQKALLRPMRG-----HL-----DPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLD 73 (353)
T ss_dssp CSSSSCCCCHHHHGGGGSCCCC-----TT-----CHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCS
T ss_pred CCCCCCCCCHHHHHHHhccccc-----cc-----CHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhc
Confidence 3455678888888888765532 11 2344567899999999999985 6789999999999999999886
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEeccccccccccChHHH
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEI 1554 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~~~~l~~I 1554 (2602)
+ |+|++++++|+++ .....+...|++++.++.++++.+|+++|++++++ ++++|++++++||||.++|+++|
T Consensus 74 ----~--d~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i 146 (353)
T 2yrr_A 74 ----R--GPVLVLVNGAFSQ-RVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAI 146 (353)
T ss_dssp ----C--CCEEEEECSHHHH-HHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHH
T ss_pred ----C--CcEEEEcCCCchH-HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHH
Confidence 3 8999999999987 44444566799999999988888999999999988 89999999999999999999999
Q ss_pred HHHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCcccc---cccc-----CCccc
Q psy15216 1555 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEA---QIHG-----GGHEY 1625 (2602)
Q Consensus 1555 ~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~---~~~g-----~~~~~ 1625 (2602)
.++|++||+++|+|++|+.+..++++..+++|++++|+|| ++||+|+|+++++++.++.+.. .+.. +....
T Consensus 147 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 226 (353)
T 2yrr_A 147 GALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWER 226 (353)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTT
T ss_pred HHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHhhhhhc
Confidence 9999999999999999998877666655678999999999 7788899999999876655541 1000 00112
Q ss_pred cCCCCCcchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe-cCCcHHHH
Q psy15216 1626 GLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGESLL 1703 (2602)
Q Consensus 1626 ~~~~gt~~~~~~~al~~aL~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~-~~~~~~~~ 1703 (2602)
....++++...+.++.++++.... ++++.++++.++++++.+.|.+ . ++.+..++ ...+.+..+.++ +.+..++.
T Consensus 227 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 303 (353)
T 2yrr_A 227 GGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKA-R-GFRPYPKA-SPLPTVLVVRPPEGVDADRLV 303 (353)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCEESCSS-SBCTTEEEEECCTTCCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-C-CCccccCc-cCCCeEEEEECCCCCCHHHHH
Confidence 345678888888888888886544 4888999999999999999988 5 88776532 113344445554 34566777
Q ss_pred Hhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHH-HHHHHHHHh
Q psy15216 1704 MAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEID-FTIKLLKMK 1765 (2602)
Q Consensus 1704 ~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid-~li~~L~~~ 1765 (2602)
..| +||.+++|..|... +++|++++.+++.+|++ +++++|++.
T Consensus 304 ~~l~~~gi~v~~g~~~~~~-------------------~~iRi~~~~~~~~~~~~~~~~~~l~~~ 349 (353)
T 2yrr_A 304 RALYAEGVAVAGGIGPTRG-------------------QVLRLGLMGEGARREAYQAFLKALDRA 349 (353)
T ss_dssp HHHHHTTEECEECCGGGTT-------------------TCEEEECSGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEeCCccccCC-------------------CeEEEecCccCCHHHHHHHHHHHHHHH
Confidence 666 79999988755322 78999998888999999 999999873
No 76
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.94 E-value=2.5e-26 Score=300.25 Aligned_cols=332 Identities=16% Similarity=0.217 Sum_probs=261.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHhccc
Q psy15216 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~-~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
.+.+..++++.+.+++.+.+.. + ..........++++++++++|.+.. +|++++|+++|+..++.++.
T Consensus 27 ~~p~p~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~- 95 (393)
T 3kgw_A 27 LGPGPSNLAPRVLAAGSLRMIG-----H-----MQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLL- 95 (393)
T ss_dssp CSSSCCCCCHHHHHHTTCCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHC-
T ss_pred ccCCCCCCCHHHHHHhcccccC-----c-----ccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcC-
Confidence 3445557788888777653211 1 1223346788999999999998655 59999999999999999987
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCcccccccHHHHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIG 159 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l~~I~ 159 (2602)
++||+|+++.+.|.+. .....++..|++++.++.++++.+|+++|++++++ ++++|++++++||||.++|+++|.
T Consensus 96 ---~~gd~vl~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~ 171 (393)
T 3kgw_A 96 ---EPGDSFLTGTNGIWGM-RAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFG 171 (393)
T ss_dssp ---CTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHH
T ss_pred ---CCCCEEEEEeCCchhH-HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHH
Confidence 8999999998777543 23344456799999999988888999999999987 899999999999999999999999
Q ss_pred HHHHhcCCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCcccceec---------------
Q psy15216 160 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIH--------------- 223 (2602)
Q Consensus 160 ~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~~~--------------- 223 (2602)
++|++||+++|+|++|+.|..++++..+++|++++|+|| ++|+.|+|++++++++++.+.+...
T Consensus 172 ~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (393)
T 3kgw_A 172 ELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKL 251 (393)
T ss_dssp HHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHH
T ss_pred HHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHh
Confidence 999999999999999999888888888889999999999 6689999999999887666543221
Q ss_pred -CCCccccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCC-CCCCCceEEEEEc-
Q psy15216 224 -GGGHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDM-NNRIPHNLNISFN- 299 (2602)
Q Consensus 224 -g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~-~~~~~~~~~~~~~- 299 (2602)
++....++..++++..+++++.++++... .++++..+++.++++++.+.|.+ + ++++..+. ....+.+..+.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~ 329 (393)
T 3kgw_A 252 WGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQE-M-GLKFFVKDPEIRLPTITTVTVPA 329 (393)
T ss_dssp TTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSSSGGGBCSSEEEEECCT
T ss_pred hhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCChhhcCCeEEEEeCCC
Confidence 11222345678899999999988988544 45899999999999999999988 4 77765332 2233455556665
Q ss_pred ccChhHHHHHh--C-CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec-CCCCCHHHHHHHHHHHHhh
Q psy15216 300 FIEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 300 ~~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~-~~~~t~edid~li~~L~~~ 369 (2602)
..+..++...| + ||.+++|..+.. ++++|+++ +..++++|+++++++|++.
T Consensus 330 ~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~~~~~~~~i~~~~~~l~~~ 384 (393)
T 3kgw_A 330 GYNWRDIVSYVLDHFSIEISGGLGPTE-------------------ERVLRIGLLGYNATTENVDRVAEALREA 384 (393)
T ss_dssp TBCHHHHHHHHHHHHCEECBCCCGGGT-------------------TTEEEEECCGGGCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCEEEeCCcccCC-------------------CCEEEEEecccCCCHHHHHHHHHHHHHH
Confidence 35667777776 5 999998765432 37999998 5556999999999999964
No 77
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.94 E-value=2.4e-26 Score=300.69 Aligned_cols=330 Identities=16% Similarity=0.203 Sum_probs=256.2
Q ss_pred CCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1400 DATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1400 ~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~-~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
.+..+.++.+.+++.+.+.. + +.........++|+++++++|.+++ ++++|+|+|+|+..++.++.
T Consensus 24 ~~p~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~--- 90 (396)
T 2ch1_A 24 PGPSNCSKRVLTAMTNTVLS-----N-----FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLL--- 90 (396)
T ss_dssp SSSCCCCHHHHHHTTSCCCC-----T-----TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC---
T ss_pred CCCCCCCHHHHHHhcccccc-----C-----CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhc---
Confidence 34456677777776554321 1 1233445688999999999999887 89999999999999999986
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEeccccccccccChHHHHHH
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGEL 1557 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~~~~l~~I~~i 1557 (2602)
++||+|++++++|+++. ....+...|++++.++.++++.+|+++|++++++ ++++|++++++||||.++|+++|.++
T Consensus 91 -~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l 168 (396)
T 2ch1_A 91 -EEGDRVLIAVNGIWAER-AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQI 168 (396)
T ss_dssp -CTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHH
T ss_pred -CCCCeEEEEcCCcccHH-HHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHH
Confidence 79999999999999974 2234455699999999988888999999999988 89999999999999999999999999
Q ss_pred hhhcCCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCcccc-------cccc-------C-
Q psy15216 1558 CRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEA-------QIHG-------G- 1621 (2602)
Q Consensus 1558 a~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~-------~~~g-------~- 1621 (2602)
|++||+++|+|++|++|..++++..+++|++++|+|| ++++.|+|+++++++.++.+.. .+.+ +
T Consensus 169 ~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (396)
T 2ch1_A 169 CHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWG 248 (396)
T ss_dssp HHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTT
T ss_pred HHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhh
Confidence 9999999999999999988888888889999999999 6778899999998765544321 1111 1
Q ss_pred -CccccCCCCCcchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCC-CCCCceEEEEEe-cC
Q psy15216 1622 -GHEYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN-NRIPHNLNISFN-FI 1697 (2602)
Q Consensus 1622 -~~~~~~~~gt~~~~~~~al~~aL~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~-~~~~~~~~~~~~-~~ 1697 (2602)
.....+..++++...+.++.++++.. ..++++..+++.++++++.+.|.+ . ++.+..+.. ...+.+..+.++ +.
T Consensus 249 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~ 326 (396)
T 2ch1_A 249 CYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGK-M-GLDIFVKDPRHRLPTVTGIMIPKGV 326 (396)
T ss_dssp CSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-H-TCCBSSCSGGGBCTTEEEEECCTTC
T ss_pred hhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-C-CCeeccCCccccCCceEEEEcCCCC
Confidence 11124556788888888888888854 356888999999999999999988 3 776664433 123445555554 34
Q ss_pred CcHHHHHhc--C-CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecC-CCCCHHHHHHHHHHHHHh
Q psy15216 1698 EGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1698 ~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~-~~~t~edid~li~~L~~~ 1765 (2602)
+..++...| + ||.+++|..+.. .+++||+++ ..++++|+++++++|++.
T Consensus 327 ~~~~~~~~L~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~~~~~~e~i~~~~~~l~~~ 379 (396)
T 2ch1_A 327 DWWKVSQYAMNNFSLEVQGGLGPTF-------------------GKAWRVGIMGECSTVQKIQFYLYGFKES 379 (396)
T ss_dssp CHHHHHHHHHHHHCBCCBCCCGGGT-------------------TTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCEEEecCccccC-------------------CCEEEEECCCCcCCHHHHHHHHHHHHHH
Confidence 566777666 3 999887764322 278999994 456899999999999974
No 78
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.94 E-value=7.2e-26 Score=293.97 Aligned_cols=328 Identities=13% Similarity=0.112 Sum_probs=254.6
Q ss_pred CCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-c-EEEeCCHHHHHHHHHHhcccc
Q psy15216 4 SATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-E-IIWTSGATESNNLAIKGAAHF 81 (2602)
Q Consensus 4 a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~-~-Iv~t~g~T~al~~~~~~l~~~ 81 (2602)
.+..++|+.+++++.+.+.. +. +....+..+++++++++++|++++ + +++++|+|+|+++++.++.
T Consensus 25 pgp~~~~~~v~~a~~~~~~~-----~~-----~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~-- 92 (376)
T 3f0h_A 25 VGPVMSSEEVRAIGAEQVPY-----FR-----TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCF-- 92 (376)
T ss_dssp SSSCCCCHHHHHHHTSCCCC-----CS-----SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHC--
T ss_pred CCCCCCcHHHHHHhcCCCCC-----CC-----CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhcc--
Confidence 34457888888888664421 11 223446788999999999999653 4 4559999999999999987
Q ss_pred cccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHH
Q psy15216 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGEL 161 (2602)
Q Consensus 82 ~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~l 161 (2602)
++||+|+++.+.|++. .....+...|++++.++.+.++.+|+++++++++++++++++++++||||.++|+++|.++
T Consensus 93 --~~gd~vi~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l 169 (376)
T 3f0h_A 93 --TKKDKVLVIDGGSFGH-RFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEF 169 (376)
T ss_dssp --CTTCCEEEEESSHHHH-HHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHH
T ss_pred --CCCCeEEEEeCChhhH-HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCcceecCHHHHHHH
Confidence 8999999998877763 3334556679999999988888899999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecccccccccccCCCCCccEEEeccccccC-CCCcEEEEEecCCCCcccceecCCCc----------ccc
Q psy15216 162 CRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGH----------EYG 230 (2602)
Q Consensus 162 a~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~G-p~G~G~l~~~~~~~~~l~~~~~g~~~----------~~~ 230 (2602)
|++||+++|+|++|+.+..++++..+++|++++|+||++| ++|+|++++++++++.+.+....+.. ...
T Consensus 170 ~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
T 3f0h_A 170 CKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERG 249 (376)
T ss_dssp HHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTT
T ss_pred HHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccC
Confidence 9999999999999999988877777788999999999766 89999999998877666543221110 001
Q ss_pred ccccCcchhHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHH
Q psy15216 231 LRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLM 308 (2602)
Q Consensus 231 ~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (2602)
....+++...++++.+++++... ++++..++..++++++.+.|.+ + ++.+..+.. .+..+.+..+..+..++..
T Consensus 250 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~--~~~~~~~~~~~~~~~~l~~ 325 (376)
T 3f0h_A 250 QTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD-L-PFELVSESP--ANGVTSVHPTTANAYDIFL 325 (376)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT-S-SEEECCSSB--BTTEEEEEESSSCHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-c-CCccCcccc--CceEEEEeCCCCCHHHHHH
Confidence 12346666666888888886554 4789999999999999999987 3 677664422 2334444444556777777
Q ss_pred Hh--C-CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 309 AI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 309 ~L--~-gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.| + ||.+++|.... ..+++|++++.++|++|+++++++|++.
T Consensus 326 ~l~~~~gi~v~~g~~~~-------------------~~~~lRis~~~~~t~e~i~~~~~~l~~~ 370 (376)
T 3f0h_A 326 KLKDEYGIWICPNGGEM-------------------KDTIFRVGHIGALTHEDNTTLVNAFKDL 370 (376)
T ss_dssp HHHHHSSEECEECCGGG-------------------TTTCEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEecCcccc-------------------CCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 77 4 99998773211 1378999999999999999999999964
No 79
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.94 E-value=2.2e-26 Score=296.94 Aligned_cols=331 Identities=11% Similarity=0.089 Sum_probs=250.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcch---hhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCCH-HHHHHHHHH
Q psy15216 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIY---GWTAEKAIEKARNEVAQLIYAD-PREIIWTSGA-TESNNLAIK 76 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~---~~~~~~~~~~~r~~lA~~~g~~-~~~Iv~t~g~-T~al~~~~~ 76 (2602)
++.+.+++|+.+++++.+++... .+++.+.+.. +.......+++++++++++|++ +++|++++|+ |+|+.+++.
T Consensus 7 ~~~g~~~~p~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~ 85 (360)
T 1w23_A 7 FNAGPSALPKPALERAQKELLNF-NDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPM 85 (360)
T ss_dssp CCSSSCCCCHHHHHHHHHTSSSS-TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHH
T ss_pred ecCCCcCCCHHHHHHHHHHhhhh-ccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHH
Confidence 56777799999999999988653 4555433322 4455678899999999999996 4689999999 999999999
Q ss_pred hcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHh-hccCCceEEEEecccCccccccc
Q psy15216 77 GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEE-KICSDTILVSVMLVNNEIGVIQP 154 (2602)
Q Consensus 77 ~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~-~i~~~tklv~i~~~~npTG~~~~ 154 (2602)
++... -++||+|+++.++|++. ..++..| +++.+++++ ++.+|++++++ +++++|++|++++++||||.++|
T Consensus 86 ~l~~~-~~~g~~vi~~~~~~~~~----~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~ 159 (360)
T 1w23_A 86 NLLTK-GTIGNYVLTGSWSEKAL----KEAKLLG-ETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ 159 (360)
T ss_dssp HHCCT-TCEEEEEECSHHHHHHH----HHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECS
T ss_pred HhcCC-CCcccEEEecchhHHHH----HHHHHhC-CeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcceecc
Confidence 88711 02467888877666552 2234569 999999875 66789999999 99999999999999999999988
Q ss_pred HHHHHHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCcc------
Q psy15216 155 ILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHE------ 228 (2602)
Q Consensus 155 l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~------ 228 (2602)
+++++||+++|+|++|+.+..++++..+ |++++|+||++||+|+||+++++++++.+.+.. ++...
T Consensus 160 -----~i~~~~~~~li~D~a~~~~~~~~~~~~~--di~~~s~sK~~~~~G~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 231 (360)
T 1w23_A 160 -----NFPEINHAPLIADMSSDILSRPLKVNQF--GMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQV-PTMLQYATHIK 231 (360)
T ss_dssp -----SCCCCCSSCEEEECTTTTTSSCCCGGGC--SEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTC-CGGGCHHHHHH
T ss_pred -----cccccCCceEEEechhhcCCCCcCcccC--CEEEEEcccccCCCCcEEEEEcHHHHhhcccCC-cchhhhhhhhh
Confidence 3444899999999999999877776554 899999999999999999999988777776543 22111
Q ss_pred ccccccCcchhHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhhccCce-EEeCCCCCCCCceEEEEEccc-Chh
Q psy15216 229 YGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHNLNISFNFI-EGE 304 (2602)
Q Consensus 229 ~~~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~g~-~l~~~~~~~~~~~~~~~~~~~-~~~ 304 (2602)
.++..++++..+++++.+++++... +++++.++++++++++.+.|.+ ++++ ....++....+.++.+.++.. +..
T Consensus 232 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (360)
T 1w23_A 232 SDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDE-SNGFYVGHAEKGSRSLMNVTFNLRNEELNQ 310 (360)
T ss_dssp TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT-TTTSSEESSCGGGBCSSEEEEECSSHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-ccCcccccCCchhccCcEEEEEcCCCccHH
Confidence 2244578899998889889986544 5789999999999999999987 6654 443222212233444544432 345
Q ss_pred HHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 305 SLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 305 ~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++.+.| +||.++++..+ .+++||+++.+++++++++++++|++.
T Consensus 311 ~~~~~l~~~gi~~~~~~~~---------------------~~~iRis~~~~~~~~~i~~~~~~l~~~ 356 (360)
T 1w23_A 311 QFLAKAKEQGFVGLNGHRS---------------------VGGCRASIYNAVPIDACIALRELMIQF 356 (360)
T ss_dssp HHHHHHHHTTEESCBCCTT---------------------TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeeeecCCCC---------------------CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 566666 78888655421 278999999999999999999999863
No 80
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.94 E-value=4.2e-26 Score=298.12 Aligned_cols=332 Identities=15% Similarity=0.195 Sum_probs=258.5
Q ss_pred eeecc-CCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHH
Q psy15216 1395 NIVFK-DATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIK 1472 (2602)
Q Consensus 1395 ~v~L~-~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~-~iv~t~gaT~al~~al~ 1472 (2602)
..+++ .+..+.++.+.+++.+.+.. + ++....+..+++++++++++|++++ ++++|+|+|+|++.++.
T Consensus 34 ~~~l~~~~~~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~ 103 (393)
T 1vjo_A 34 SRLLLGPGPSNAHPSVLQAMNVSPVG-----H-----LDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIA 103 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHHSSCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHH
T ss_pred cceeccCCCCCCCHHHHHHHhccccc-----c-----cCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHH
Confidence 35565 34567788888888765532 1 1233557788999999999999888 89999999999999999
Q ss_pred hhhhhhccCCCEEEEcCCCCcc--hHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEecccccccccc
Q psy15216 1473 GAAHFYKKRGKHIITVQTEHKS--VLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQ 1549 (2602)
Q Consensus 1473 ~l~~~~~~~gd~Vlv~~~~~~s--~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~~~ 1549 (2602)
++. ++||+|++++++|++ +...+ ...|++++.++.++++.+|+++|++++++ ++++|++++++||||.+.
T Consensus 104 ~~~----~~gd~Vl~~~~~~~~~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~ 176 (393)
T 1vjo_A 104 NAV----EPGDVVLIGVAGYFGNRLVDMA---GRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQ 176 (393)
T ss_dssp HHC----CTTCEEEEEESSHHHHHHHHHH---HHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEEC
T ss_pred hcc----CCCCEEEEEcCChhHHHHHHHH---HHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceec
Confidence 986 799999999999998 44443 44599999999988888999999999998 899999999999999999
Q ss_pred ChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCccc-------cccccC
Q psy15216 1550 PILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIE-------AQIHGG 1621 (2602)
Q Consensus 1550 ~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~-------~~~~g~ 1621 (2602)
|+++|.++|++||+++|+|++|++|..++++..+++|++++|+|| +.+|.|+|++++++++++.+. +.+++.
T Consensus 177 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 256 (393)
T 1vjo_A 177 PLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDM 256 (393)
T ss_dssp CCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCH
T ss_pred cHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecCc
Confidence 999999999999999999999998888888877889999999999 556767999999987654442 111110
Q ss_pred C------ccccCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEE
Q psy15216 1622 G------HEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF 1694 (2602)
Q Consensus 1622 ~------~~~~~~~gt~~~~~~~al~~aL~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~ 1694 (2602)
. ....+..|+++...+.++.++++... .++++.++++.++++++.+.|.+ . ++.+..+.....+.+..+.+
T Consensus 257 ~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~ 334 (393)
T 1vjo_A 257 NLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLED-I-GLSLHVEKEYRLPTLTTVCI 334 (393)
T ss_dssp HHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCGGGBCSSEEEEEC
T ss_pred HhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH-c-CCcccCCccccCCcEEEEEc
Confidence 0 01123334888888988889998643 45788999999999999999988 4 77665443222344555555
Q ss_pred e-cCCcHHHHHhc--C-CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecC-CCCCHHHHHHHHHHHHH
Q psy15216 1695 N-FIEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1695 ~-~~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~-~~~t~edid~li~~L~~ 1764 (2602)
+ +.+..++...| + ||.+++|..|... +++||++. ..++++++++++++|++
T Consensus 335 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~-------------------~~iRis~~~~~~~~~~i~~~~~~l~~ 390 (393)
T 1vjo_A 335 PDGVDGKAVARRLLNEHNIEVGGGLGELAG-------------------KVWRVGLMGFNSRKESVDQLIPALEQ 390 (393)
T ss_dssp CTTCCHHHHHHHHHHHHCEECEECCGGGTT-------------------TEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhhCCEEEecCccccCC-------------------CEEEEeCCccCChHHHHHHHHHHHHH
Confidence 4 34566677666 5 9999988765432 78999954 44577789999999986
No 81
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.94 E-value=2.2e-26 Score=298.28 Aligned_cols=340 Identities=13% Similarity=0.151 Sum_probs=253.0
Q ss_pred eeeccC--CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHH-HHHHhCCCCCcEEEeCCHHHHHHHHH
Q psy15216 1395 NIVFKD--ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNE-VAQLIYADPREIIWTSGATESNNLAI 1471 (2602)
Q Consensus 1395 ~v~L~~--~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~-ia~~~g~~~~~iv~t~gaT~al~~al 1471 (2602)
.++++. ...+.++.+.+++.+.+...........+..++.......++|++ +++++|.+ ++++|+|+|+|+..++
T Consensus 9 ~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a~~~~~ 86 (371)
T 2e7j_A 9 FINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD--VARVTNGAREAKFAVM 86 (371)
T ss_dssp CEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS--EEEEESSHHHHHHHHH
T ss_pred cEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC--EEEEeCChHHHHHHHH
Confidence 456654 245778899999998876532111100122334455678899999 99999987 9999999999999999
Q ss_pred HhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEec--cCCCCCcChhHHHhhcc-----CCceEEEEeccccc
Q psy15216 1472 KGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLK--PKNNGLITLSQLEEKIC-----SDTILVSVMLVNNE 1544 (2602)
Q Consensus 1472 ~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~--~~~~~~id~d~l~~~i~-----~~t~lv~l~~~~n~ 1544 (2602)
.++. ++||+|++++++|+++...+.. .|++++.++ .++++.+|+++|+++++ +++++|++++++||
T Consensus 87 ~~~~----~~gd~vl~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~np 159 (371)
T 2e7j_A 87 HSLA----KKDAWVVMDENCHYSSYVAAER---AGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGN 159 (371)
T ss_dssp HHHC----CTTCEEEEETTCCHHHHHHHHH---TTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTT
T ss_pred HHHh----CCCCEEEEccCcchHHHHHHHH---cCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCC
Confidence 9986 7999999999999998877544 499999999 77778899999999998 78999999999999
Q ss_pred cccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCc-cccccccCC
Q psy15216 1545 IGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTR-IEAQIHGGG 1622 (2602)
Q Consensus 1545 tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~-l~~~~~g~~ 1622 (2602)
||.++|+++|.++|++||+++|+|++|+.+..++++..+++|++++|+|| ++++.|+|++++++++++. +.+...++.
T Consensus 160 tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 239 (371)
T 2e7j_A 160 YGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKN 239 (371)
T ss_dssp TCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTT
T ss_pred CcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccccCcc
Confidence 99999999999999999999999999999887666666678999999999 6666679999999988887 776554333
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcH
Q psy15216 1623 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRI--LFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGE 1700 (2602)
Q Consensus 1623 ~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~--~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~ 1700 (2602)
....++.++++..+++++.+++++... ...++. .++++++.+.|.+ . ++.+..+... ...+..+.++ +..
T Consensus 240 ~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~~-~~~~~~~~~~--~~~ 311 (371)
T 2e7j_A 240 KEVELLGCTARGATIITLMASFPHVRE---RIKRWDEEVEKARRFAAEMEK-L-GIKQLGDNPH-NHDLMFFHAE--VLY 311 (371)
T ss_dssp SBGGGTTCCCCSHHHHHHHHHHHHHHH---HGGGHHHHHHHHHHHHHHHHH-T-TCEEESSSSC-CSSEEEEECH--HHH
T ss_pred cccccccCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH-c-CcEEecCCCc-cCceEEEECC--CHH
Confidence 333344778888888888888876543 566777 8899999999988 4 7877754321 1234444444 455
Q ss_pred HHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEE-EecCCC-CCHHHHHHHHHHHHHh
Q psy15216 1701 SLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR-FTIGRF-TTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1701 ~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iR-ls~~~~-~t~edid~li~~L~~~ 1765 (2602)
++...| +||.+.+ ..+... .-+.. .+++| ++++.+ +|.+++++++++|++.
T Consensus 312 ~~~~~l~~~gi~~~~-~~~~~~---------~~g~~----~~~iRii~~~~~~~~~~~i~~~~~~l~~~ 366 (371)
T 2e7j_A 312 EISKKAKGGRFFLYR-ELKSRK---------IHGIK----PGLTRYFKLSTYGLSDEEVDYVLNAFKEI 366 (371)
T ss_dssp HHHHHSSSGGGHHHH-HHHHTT---------EECSC----TTCCSEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEEe-cccccc---------ccCCC----CCceEEEEeeccCCCHHHHHHHHHHHHHH
Confidence 666666 5666654 211100 00111 37899 999988 8999999999999873
No 82
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.94 E-value=7.6e-26 Score=292.55 Aligned_cols=324 Identities=14% Similarity=0.137 Sum_probs=249.7
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHhccccccc
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PREIIWTSGATESNNLAIKGAAHFYKK 84 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~--~~~Iv~t~g~T~al~~~~~~l~~~~~~ 84 (2602)
.++|+.+.+++.+.+ . + .++.......+++|+++++++|.+ ++++++++|+|+|+++++.++. +
T Consensus 13 ~~~~~~v~~a~~~~~----~--~----~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~----~ 78 (366)
T 1m32_A 13 LTTSRTVKEAMLFDS----C--T----WDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSAL----G 78 (366)
T ss_dssp CCCCHHHHHTTCCCC----C--T----TSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSC----C
T ss_pred cCCCHHHHHHHhhhh----c--C----CCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhc----C
Confidence 367788888776632 1 1 111111146789999999999942 2379999999999999999997 7
Q ss_pred CCCEEEEcC-CCCcc-cHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC--CceEEEEecccCcccccccHHHHHH
Q psy15216 85 RGKHIITVQ-TEHKS-VLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS--DTILVSVMLVNNEIGVIQPILEIGE 160 (2602)
Q Consensus 85 ~gd~Vlv~~-~~~~s-~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~--~tklv~i~~~~npTG~~~~l~~I~~ 160 (2602)
+||+|++.+ +.|++ +.... ...|++++.+++++++.+|+++|++++++ ++++|++++++||||.++|+++|.+
T Consensus 79 ~gd~vi~~~~~~~~~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~ 155 (366)
T 1m32_A 79 PQDKVLIVSNGAYGARMVEMA---GLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGA 155 (366)
T ss_dssp TTCCEEEEESSHHHHHHHHHH---HHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHH
T ss_pred CCCeEEEEeCCCccHHHHHHH---HHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHH
Confidence 899877664 66765 22333 34499999999888888999999999975 5889999999999999999999999
Q ss_pred HHHhcCCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCcccceecCCCc-----------c
Q psy15216 161 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGH-----------E 228 (2602)
Q Consensus 161 la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~-----------~ 228 (2602)
+|++||+++|+|++|+.+..++++..+++|++++|+|| ++||.|+|++++++++++.+.+...++.. .
T Consensus 156 l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (366)
T 1m32_A 156 LAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDN 235 (366)
T ss_dssp HHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccccCcCccccccCccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhccc
Confidence 99999999999999999888878777789999999999 56898999999999877776543211110 0
Q ss_pred ccccccCcchhHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc---ccCh
Q psy15216 229 YGLRSGTLATHQIVGMGEAFRLARIE--MKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN---FIEG 303 (2602)
Q Consensus 229 ~~~~~gt~~~~~~~al~~al~~~~~~--~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~---~~~~ 303 (2602)
.....++++...++++.++++..... +++..++++++++++.+.|.+ + ++.+..++....+.++.+.++ ..+.
T Consensus 236 ~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (366)
T 1m32_A 236 HGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRA-L-GFNTLLDDELHSPIITAFYSPEDPQYRF 313 (366)
T ss_dssp TTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCGGGBCSSEEEEECCCCTTCCH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHH-C-CCeeccCchhcCceEEEEEcCccCCCCH
Confidence 01224678888888888899865443 788999999999999999987 4 776654422223445566665 3456
Q ss_pred hHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 304 ESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 304 ~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++.+.| +||.++++..|. .+++|++++.+++++|+++++++|++.
T Consensus 314 ~~~~~~l~~~gi~v~~~~~~~--------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~ 361 (366)
T 1m32_A 314 SEFYRRLKEQGFVIYPGKVSQ--------------------SDCFRIGNIGEVYAADITALLTAIRTA 361 (366)
T ss_dssp HHHHHHHHHTTEECEECCCSS--------------------SCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEECCcCCC--------------------CCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 6777777 799998887652 278999999999999999999999863
No 83
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.94 E-value=7.8e-26 Score=295.57 Aligned_cols=331 Identities=16% Similarity=0.229 Sum_probs=259.1
Q ss_pred cCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHhhhhh
Q psy15216 1399 KDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAAHF 1477 (2602)
Q Consensus 1399 ~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~-~iv~t~gaT~al~~al~~l~~~ 1477 (2602)
.....+.++.+.+++.+.+. + + ..........+++++++++++.+.+ ++++|+|+++|+..++.++.
T Consensus 28 ~p~p~~~~~~v~~a~~~~~~----~-~-----~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~-- 95 (393)
T 3kgw_A 28 GPGPSNLAPRVLAAGSLRMI----G-H-----MQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLL-- 95 (393)
T ss_dssp SSSCCCCCHHHHHHTTCCCC----C-T-----TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHC--
T ss_pred cCCCCCCCHHHHHHhccccc----C-c-----ccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcC--
Confidence 34556778888877755321 1 1 1233456788999999999998655 49999999999999999886
Q ss_pred hccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEeccccccccccChHHHHH
Q psy15216 1478 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGE 1556 (2602)
Q Consensus 1478 ~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~~~~l~~I~~ 1556 (2602)
++||+|+++.+.|.+.. ....+...|++++.++.+.++.+|+++|++++++ ++++|++++++||||.+.|+++|.+
T Consensus 96 --~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~ 172 (393)
T 3kgw_A 96 --EPGDSFLTGTNGIWGMR-AAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGE 172 (393)
T ss_dssp --CTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHH
T ss_pred --CCCCEEEEEeCCchhHH-HHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHH
Confidence 89999999987775431 2344455699999999988888999999999998 9999999999999999999999999
Q ss_pred HhhhcCCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCccccc----------------cc
Q psy15216 1557 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQ----------------IH 1619 (2602)
Q Consensus 1557 ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~~----------------~~ 1619 (2602)
+|++||+++|+|++|+.|..++++..+++|++++|+|| ++|+.|+|++++++++++.+.+. ++
T Consensus 173 l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (393)
T 3kgw_A 173 LCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLW 252 (393)
T ss_dssp HHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHT
T ss_pred HHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhh
Confidence 99999999999999999888888888889999999999 67899999999998765554321 12
Q ss_pred cCCccccCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC-CCCCCceEEEEEe-c
Q psy15216 1620 GGGHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDM-NNRIPHNLNISFN-F 1696 (2602)
Q Consensus 1620 g~~~~~~~~~gt~~~~~~~al~~aL~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~-~~~~~~~~~~~~~-~ 1696 (2602)
++....++..++++...+.++.++++... .++++..+++.++++++.+.|.+ . ++.+..+. ....+....+.++ .
T Consensus 253 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~ 330 (393)
T 3kgw_A 253 GCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQE-M-GLKFFVKDPEIRLPTITTVTVPAG 330 (393)
T ss_dssp TCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSSSGGGBCSSEEEEECCTT
T ss_pred hhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCChhhcCCeEEEEeCCCC
Confidence 22233456678899999999988988544 45889999999999999999988 4 66665332 2233444556655 3
Q ss_pred CCcHHHHHhc--C-CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEec-CCCCCHHHHHHHHHHHHHh
Q psy15216 1697 IEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1697 ~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~-~~~~t~edid~li~~L~~~ 1765 (2602)
.+..++...| + ||.+++|..+... +++|+++ +..+|.+|+++++++|++.
T Consensus 331 ~~~~~~~~~l~~~~gi~v~~g~~~~~~-------------------~~iRi~~~~~~~~~~~i~~~~~~l~~~ 384 (393)
T 3kgw_A 331 YNWRDIVSYVLDHFSIEISGGLGPTEE-------------------RVLRIGLLGYNATTENVDRVAEALREA 384 (393)
T ss_dssp BCHHHHHHHHHHHHCEECBCCCGGGTT-------------------TEEEEECCGGGCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEeCCcccCCC-------------------CEEEEEecccCCCHHHHHHHHHHHHHH
Confidence 4566777666 4 9999988754332 7999998 4445999999999999974
No 84
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.94 E-value=1.5e-25 Score=289.13 Aligned_cols=330 Identities=11% Similarity=0.084 Sum_probs=243.7
Q ss_pred eecc-CCCCCCCHHHHHHHHHHHhhccCCCCCc---cchhHHHHHHHHHHHHHHHHHHhCCCCC-c-EEEeCCHHHHHHH
Q psy15216 1396 IVFK-DATTPIDPRVVDKMIPYLRVQFGNPASR---NHIYGWTAEKAIEKARNEVAQLIYADPR-E-IIWTSGATESNNL 1469 (2602)
Q Consensus 1396 v~L~-~~~~~~~~~v~eal~~~l~~~~~np~~~---~~~~~~~~~~~~~~lr~~ia~~~g~~~~-~-iv~t~gaT~al~~ 1469 (2602)
++++ .++.+.|+.+++++.+.+.... +++.+ .+..+....+..+++++++++++|++++ + +++|+|+|+|++.
T Consensus 5 ~~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~ 83 (362)
T 2c0r_A 5 AYNFNAGPAALPLEVLERAQAEFVDYQ-HTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAM 83 (362)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSST-TSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHH
T ss_pred eeeccCCCCCCCHHHHHHHHHHHhhhh-hcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHH
Confidence 3443 5667899999999999886532 22211 1122445567889999999999999764 6 4678999999999
Q ss_pred HHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC--CC--CcChhHHHhhccCCceEEEEecccccc
Q psy15216 1470 AIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NG--LITLSQLEEKICSDTILVSVMLVNNEI 1545 (2602)
Q Consensus 1470 al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~--~id~d~l~~~i~~~t~lv~l~~~~n~t 1545 (2602)
++.++. ++||+|+++.+.|.+.. ....++..| ++++++.+. ++ .+|.++++ ++++|++|+++|++|||
T Consensus 84 ~~~~l~----~~gd~vl~~~~~~~~~~-~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~~n~t 155 (362)
T 2c0r_A 84 IPMNFL----KEGQTANYVMTGSWASK-ALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSNETIE 155 (362)
T ss_dssp HHHHHC----CTTCEEEEEECSHHHHH-HHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESEETTT
T ss_pred HHHhcC----CCCCeEEEEecCcHhHH-HHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCCcCcc
Confidence 999987 79999998876655532 123334448 899998762 22 35666654 78899999999999999
Q ss_pred ccc-cChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEEEecCCCCcccccc---ccC
Q psy15216 1546 GVI-QPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQI---HGG 1621 (2602)
Q Consensus 1546 G~~-~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~---~g~ 1621 (2602)
|.+ .|+++| ||+++++|++|+.+..++++.++ |++++|+||++||+|+||+++++++++.+.+.. +.+
T Consensus 156 G~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~~~--d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~~~~~~ 227 (362)
T 2c0r_A 156 GAQFKAFPDT------GSVPLIGDMSSDILSRPFDLNQF--GLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRY 227 (362)
T ss_dssp TEECSSCCCC------TTSCEEEECTTTTTSSCCCGGGC--SEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCH
T ss_pred ceeccccccc------CCCEEEEEChhhccCCccchhHC--cEEEEeccccccCcCcEEEEEcHHHHhhccccCchHHhH
Confidence 996 678776 89999999999999888776654 899999999889999999999998877765421 110
Q ss_pred --CccccCCCCCcchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCcE-EEeCCCCCCCCceEEEEEec
Q psy15216 1622 --GHEYGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHNLNISFNF 1696 (2602)
Q Consensus 1622 --~~~~~~~~gt~~~~~~~al~~aL~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~gl-~i~~~~~~~~~~~~~~~~~~ 1696 (2602)
........+|++...++++.+||+.... +++.+.++++++++++++.|.+ .+++ .+..++....+....+.++.
T Consensus 228 ~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (362)
T 2c0r_A 228 DTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQ-SGGFYRGCVDVDSRSDMNITFRLAS 306 (362)
T ss_dssp HHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT-STTSSEESSCGGGBCSSEEEEECSC
T ss_pred HHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-cCCccccCCChHHcCCcEEEEEcCC
Confidence 0012234578999999999999997655 6899999999999999999987 4435 66543222223333344432
Q ss_pred -CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1697 -IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1697 -~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.+..++...| +||.+.+|..+ .+++|+|++.++|.+|+++++++|++
T Consensus 307 ~~~~~~~~~~L~~~gi~~~~g~~~---------------------~~~iRis~~~~~~~e~i~~l~~~l~~ 356 (362)
T 2c0r_A 307 EELEKEFVKASEQEGFVGLKGHRS---------------------VGGLRASIYNAVPYESCEALVQFMEH 356 (362)
T ss_dssp HHHHHHHHHHHHHTTEESCBCCTT---------------------TCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHCCCeeccCCCC---------------------CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 2345666666 79987766432 15699999999999999999999987
No 85
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.94 E-value=2.6e-25 Score=287.14 Aligned_cols=305 Identities=17% Similarity=0.102 Sum_probs=243.4
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
++|+.+.+++.+.+...+.+|+ ....++|+++++++|+++++|++|+|+|+|+++++.++. ++||
T Consensus 45 ~~~~~v~~a~~~~~~~~~~y~~-----------~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~----~~gd 109 (363)
T 3ffh_A 45 GTSKKVAAIQANSSVETEIYPD-----------GWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLL----DTTT 109 (363)
T ss_dssp CCCHHHHHHHHTCBSCCCBC---------------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC----STTC
T ss_pred CCCHHHHHHHHHHHHHhhcCCC-----------cchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHc----cCCC
Confidence 5788999988886644333332 245789999999999988999999999999999999987 7999
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhc--
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK-- 165 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~-- 165 (2602)
+|+++.+.|+++...++.. |++++.++.++++.+|++++++++++++++|++++|+||||.++|+++|.++++.+
T Consensus 110 ~vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~ 186 (363)
T 3ffh_A 110 NTVMATPTFVQYRQNALIE---GAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPS 186 (363)
T ss_dssp EEEEEESSCHHHHHHHHHH---TCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCT
T ss_pred EEEEcCCChHHHHHHHHHc---CCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCC
Confidence 9999999999987777666 99999999988889999999999999999999999999999999999999999887
Q ss_pred CCEEEEecccccccc-----cccC-CCCCccEEEeccccccCCCCc--EEEEEecCCCCcccceecCCCccccccccCcc
Q psy15216 166 GVIFHCDAAQAVGKI-----DINI-QNYKVDLMSFSAHKIYGPKGI--GALYIRRNPRTRIEAQIHGGGHEYGLRSGTLA 237 (2602)
Q Consensus 166 g~~livD~a~a~g~~-----~~dl-~~~~~D~~~~S~~K~~Gp~G~--G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~ 237 (2602)
|+++|+|++|+.... .... ...+.++++.|++|.+|++|. ||+++++++++.+.+.. ..++++
T Consensus 187 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~---------~~~~~~ 257 (363)
T 3ffh_A 187 DVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVR---------PPFNTT 257 (363)
T ss_dssp TSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTC---------CSCCCB
T ss_pred CcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhC---------CCCCCC
Confidence 999999999983321 1111 122345888899999998885 99999887777665443 234677
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEE
Q psy15216 238 THQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAV 315 (2602)
Q Consensus 238 ~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v 315 (2602)
....+++.++++. ..++++..+++.++++++.+.|.+ .+++.+..+.. .++.+.++. +..++.+.| +||.+
T Consensus 258 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~----~~~~~~~~~-~~~~~~~~l~~~gi~v 330 (363)
T 3ffh_A 258 SIGQKLAIEAIKD-QAFIGECRTSNANGIKQYEAFAKR-FEKVKLYPANG----NFVLIDLGI-EAGTIFSYLEKNGYIT 330 (363)
T ss_dssp HHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHH-CTTCEECCCCS----SEEEEECSS-CHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHhh-CCCceECCCCC----eEEEEECCC-CHHHHHHHHHHCCeEE
Confidence 7888888788873 256788899999999999999987 67888764322 334444443 666777776 79999
Q ss_pred cccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 316 SSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 316 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
++|..+.. ++++||+++ +++|+++++++|++
T Consensus 331 ~~g~~~~~-------------------~~~iRis~~---~~~~i~~~~~~l~~ 361 (363)
T 3ffh_A 331 RSGAALGF-------------------PTAVRITIG---KEEDNSAVIALLEK 361 (363)
T ss_dssp EETTTTTC-------------------TTEEEEECC---CHHHHHHHHHHHHH
T ss_pred EeCccCCC-------------------CCeEEEECC---CHHHHHHHHHHHHH
Confidence 98876543 289999998 99999999999985
No 86
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.94 E-value=1.9e-25 Score=289.93 Aligned_cols=330 Identities=13% Similarity=0.111 Sum_probs=253.1
Q ss_pred ccCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCC-cEE-EeCCHHHHHHHHHHhhh
Q psy15216 1398 FKDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EII-WTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1398 L~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~-~iv-~t~gaT~al~~al~~l~ 1475 (2602)
+..+..+.++.+++++.+.+. .+. ........+++++++++++|++++ +++ +|+|+|+|++.++.++.
T Consensus 23 ~~pgp~~~~~~v~~a~~~~~~-----~~~-----~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~ 92 (376)
T 3f0h_A 23 FTVGPVMSSEEVRAIGAEQVP-----YFR-----TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCF 92 (376)
T ss_dssp CSSSSCCCCHHHHHHHTSCCC-----CCS-----SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHC
T ss_pred ecCCCCCCcHHHHHHhcCCCC-----CCC-----CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhcc
Confidence 344556788888888866442 111 234456788999999999999653 554 58999999999999987
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHH
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIG 1555 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~ 1555 (2602)
++||+|+++.+.|++.. ....+...|++++.++.+.++.+|+++++++++++|++|++++++||||.++|+++|.
T Consensus 93 ----~~gd~vi~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~ 167 (376)
T 3f0h_A 93 ----TKKDKVLVIDGGSFGHR-FVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIG 167 (376)
T ss_dssp ----CTTCCEEEEESSHHHHH-HHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHH
T ss_pred ----CCCCeEEEEeCChhhHH-HHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCcceecCHHHHH
Confidence 89999999988776643 3344556699999999988888999999999999999999999999999999999999
Q ss_pred HHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccC-CCceEEEEEecCCCCccccccccCCc----------c
Q psy15216 1556 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGH----------E 1624 (2602)
Q Consensus 1556 ~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~g-p~G~G~l~~~~~~~~~l~~~~~g~~~----------~ 1624 (2602)
++|++||+++|+|++|+.+..++++..+++|++++|+||.++ +.|+|++++++++++.+.+....+.. .
T Consensus 168 ~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
T 3f0h_A 168 EFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQE 247 (376)
T ss_dssp HHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHT
T ss_pred HHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcc
Confidence 999999999999999999888777776778999999999665 89999999998766555432111100 0
Q ss_pred ccCCCCCcchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHH
Q psy15216 1625 YGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESL 1702 (2602)
Q Consensus 1625 ~~~~~gt~~~~~~~al~~aL~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~ 1702 (2602)
......+++...++++.+++++... +++.+.++..++++++.+.|.+ + ++.+..+. ..+....+..+..+..++
T Consensus 248 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~--~~~~~~~~~~~~~~~~~l 323 (376)
T 3f0h_A 248 RGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD-L-PFELVSES--PANGVTSVHPTTANAYDI 323 (376)
T ss_dssp TTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT-S-SEEECCSS--BBTTEEEEEESSSCHHHH
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-c-CCccCccc--cCceEEEEeCCCCCHHHH
Confidence 1122346666777888888886554 4888999999999999999987 3 67665432 123333333334566777
Q ss_pred HHhc--C-CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1703 LMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1703 ~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
...| + ||.+++|.... ..+++|++++.++|.+|+++++++|++.
T Consensus 324 ~~~l~~~~gi~v~~g~~~~-------------------~~~~lRis~~~~~t~e~i~~~~~~l~~~ 370 (376)
T 3f0h_A 324 FLKLKDEYGIWICPNGGEM-------------------KDTIFRVGHIGALTHEDNTTLVNAFKDL 370 (376)
T ss_dssp HHHHHHHSSEECEECCGGG-------------------TTTCEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEecCcccc-------------------CCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 7666 4 99998774221 1278999999999999999999999973
No 87
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.94 E-value=4.4e-25 Score=290.75 Aligned_cols=338 Identities=16% Similarity=0.161 Sum_probs=258.2
Q ss_pred ceeeeccC-CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q psy15216 1393 YTNIVFKD-ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAI 1471 (2602)
Q Consensus 1393 ~~~v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al 1471 (2602)
...+||+. +..+.++.+.+++.+.+...++++... ..+.........++++++++++|+++++|++|+|+++++..++
T Consensus 27 ~~~~yld~~~~~~~~~~v~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al 105 (416)
T 1qz9_A 27 EGVIYLDGNSLGARPVAALARAQAVIAEEWGNGLIR-SWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVL 105 (416)
T ss_dssp TTCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGG-HHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHH
T ss_pred CCeEeecCCCcCCCcHHHHHHHHHHHHHHHhccCcc-ccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHH
Confidence 45688874 445778889999999987655554321 0111112356788999999999998889999999999999888
Q ss_pred Hhhhhhhc----cCCCE-EEEcCCCCcchHHHHHHHH-hC--CcEEEEeccCCCCCcChhHHHhhccCCceEEEEecccc
Q psy15216 1472 KGAAHFYK----KRGKH-IITVQTEHKSVLDSIRKLE-ND--GFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNN 1543 (2602)
Q Consensus 1472 ~~l~~~~~----~~gd~-Vlv~~~~~~s~~~~~~~~~-~~--G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n 1543 (2602)
.++.. + ++||+ |+++.+.|+++...+..+. .. |++++.++. +++|++++++++++|++++++|
T Consensus 106 ~~~~~--~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~~~~~~v~~~~~~n 176 (416)
T 1qz9_A 106 SAALR--VQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAIDQDTAVVMLTHVNY 176 (416)
T ss_dssp HHHHH--HHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCSTTEEEEEEESBCT
T ss_pred Hhhcc--cccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhCCCceEEEEecccc
Confidence 87641 3 68886 6666779998877765443 33 889999875 7899999999999999999999
Q ss_pred ccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccc-cCCCce-EEEEEecCCCCccccccccC
Q psy15216 1544 EIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKI-YGPKGI-GALYIRRNPRTRIEAQIHGG 1621 (2602)
Q Consensus 1544 ~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~-~gp~G~-G~l~~~~~~~~~l~~~~~g~ 1621 (2602)
|||.+.|+++|.++|++||+++|+|++|+.|..++++..+++|++++|+||+ +++.|+ |++++++++++.+.+...|+
T Consensus 177 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~~~~~g~ 256 (416)
T 1qz9_A 177 KTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGW 256 (416)
T ss_dssp TTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCG
T ss_pred CcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCCeEEEEECHHHHhccCCCcccc
Confidence 9999999999999999999999999999998877666556789999999994 556666 99999999887777654442
Q ss_pred Cc----------------cccCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCC--cEEEeCCC
Q psy15216 1622 GH----------------EYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIE--EIYINGDM 1682 (2602)
Q Consensus 1622 ~~----------------~~~~~~gt~~~~~~~al~~aL~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~--gl~i~~~~ 1682 (2602)
.. ..++..++++...++++.++++... .++++..+++.++++++.+.|.+..+ ++.+..+.
T Consensus 257 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~ 336 (416)
T 1qz9_A 257 FGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPR 336 (416)
T ss_dssp GGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCS
T ss_pred CccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCC
Confidence 11 1245677899999999988998654 46788999999999999999987335 78776543
Q ss_pred CC-CCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecC-CCCCHHHHHHH
Q psy15216 1683 NN-RIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTTEKEIDFT 1758 (2602)
Q Consensus 1683 ~~-~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~-~~~t~edid~l 1758 (2602)
.. ....+ +++...+..++...| +||.+... ..+++|++++ .++|.+|++++
T Consensus 337 ~~~~~~~~--~~~~~~~~~~l~~~l~~~gi~~~~~-----------------------~~~~lRis~~~~~~t~~~i~~~ 391 (416)
T 1qz9_A 337 EHAKRGSH--VSFEHPEGYAVIQALIDRGVIGDYR-----------------------EPRIMRFGFTPLYTTFTEVWDA 391 (416)
T ss_dssp SGGGBCSE--EEEECTTHHHHHHHHHTTTEECEEE-----------------------TTTEEEEECCTTTCCHHHHHHH
T ss_pred CHHHcCCE--EEEecCCHHHHHHHHHhCCcEeccC-----------------------CCCeEEEeCcccCCCHHHHHHH
Confidence 21 11233 344333456666666 68875311 1278999998 48999999999
Q ss_pred HHHHHHh
Q psy15216 1759 IKLLKMK 1765 (2602)
Q Consensus 1759 i~~L~~~ 1765 (2602)
+++|++.
T Consensus 392 ~~~l~~~ 398 (416)
T 1qz9_A 392 VQILGEI 398 (416)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999974
No 88
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.94 E-value=2.3e-25 Score=287.98 Aligned_cols=327 Identities=13% Similarity=0.139 Sum_probs=249.2
Q ss_pred cCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHH-HHHHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1399 KDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAE-KAIEKARNEVAQLIYAD--PREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1399 ~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~-~~~~~lr~~ia~~~g~~--~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
+.+....++.+.+++.+.+ + + .. .... ....++|+++++++|.+ ++++++|+|+|+|++.++.++.
T Consensus 9 ~~gp~~~~~~v~~a~~~~~----~--~----~~-~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~ 77 (366)
T 1m32_A 9 TPGPLTTSRTVKEAMLFDS----C--T----WD-DDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSAL 77 (366)
T ss_dssp SSSSCCCCHHHHHTTCCCC----C--T----TS-HHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSC
T ss_pred cCCCcCCCHHHHHHHhhhh----c--C----CC-HHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhc
Confidence 3334456778888776532 1 1 11 1222 56789999999999942 2369999999999999999987
Q ss_pred hhhccCCCEEEEcC-CCCcc-hHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC--CceEEEEeccccccccccCh
Q psy15216 1476 HFYKKRGKHIITVQ-TEHKS-VLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS--DTILVSVMLVNNEIGVIQPI 1551 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~-~~~~s-~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~--~t~lv~l~~~~n~tG~~~~l 1551 (2602)
++||+|++++ +.|++ +..... ..|++++.++.++++.+|+++|++++++ ++++|++++++||||.++|+
T Consensus 78 ----~~gd~vi~~~~~~~~~~~~~~~~---~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l 150 (366)
T 1m32_A 78 ----GPQDKVLIVSNGAYGARMVEMAG---LMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPI 150 (366)
T ss_dssp ----CTTCCEEEEESSHHHHHHHHHHH---HHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCH
T ss_pred ----CCCCeEEEEeCCCccHHHHHHHH---HhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCH
Confidence 7899887765 66765 323333 3489999999988888999999999975 58899999999999999999
Q ss_pred HHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCccccccccCCc-------
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGH------- 1623 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~~~~g~~~------- 1623 (2602)
++|.++|++||+++|+|++|+.+..++++..+++|++++|+|| ++||.|+|++++++++++.+.+...+...
T Consensus 151 ~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (366)
T 1m32_A 151 DEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWR 230 (366)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccHHHHHh
Confidence 9999999999999999999999888777777789999999999 66898999999998876666542111100
Q ss_pred ----cccCCCCCcchhHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe--
Q psy15216 1624 ----EYGLRSGTLATHQIVGMGEAFRLARIE--MKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-- 1695 (2602)
Q Consensus 1624 ----~~~~~~gt~~~~~~~al~~aL~~~~~~--~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~-- 1695 (2602)
......++++...++++.++++..... +++..++++++++++.+.|.+ . ++.+..+.....+....+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 308 (366)
T 1m32_A 231 CMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRA-L-GFNTLLDDELHSPIITAFYSPED 308 (366)
T ss_dssp HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCGGGBCSSEEEEECCCC
T ss_pred hhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHH-C-CCeeccCchhcCceEEEEEcCcc
Confidence 002224678888888888899865443 788999999999999999988 4 666554321223445555555
Q ss_pred -cCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1696 -FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1696 -~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
..+..++...| +||.+++|..|. .+++|++++.++|.+|+++++++|++.
T Consensus 309 ~~~~~~~~~~~l~~~gi~v~~~~~~~--------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~ 361 (366)
T 1m32_A 309 PQYRFSEFYRRLKEQGFVIYPGKVSQ--------------------SDCFRIGNIGEVYAADITALLTAIRTA 361 (366)
T ss_dssp TTCCHHHHHHHHHHTTEECEECCCSS--------------------SCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCEEEECCcCCC--------------------CCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 34556676666 799999887652 278999999999999999999999873
No 89
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.93 E-value=3.5e-25 Score=286.23 Aligned_cols=304 Identities=15% Similarity=0.099 Sum_probs=244.2
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
++|+.+++++.+.+...+.+|... ..++|+++++++|+++++|++|+|+++|+++++.++. ++||
T Consensus 43 ~~~~~v~~a~~~~~~~~~~y~~~~-----------~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~----~~gd 107 (365)
T 3get_A 43 GTPPKAIECLRQNANKAHLYPDDS-----------MIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKL----NSKN 107 (365)
T ss_dssp CSCHHHHHHHHHHGGGTTSCCCTT-----------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC----CTTC
T ss_pred CCCHHHHHHHHHHHHhhccCCCCC-----------hHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHh----CCCC
Confidence 678999999999987655555431 1478999999999988999999999999999999987 8999
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEecc-CCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHH--h
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKP-KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCR--S 164 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~-~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~--~ 164 (2602)
+|+++.+.|+++...+... |++++.+++ ++++ +|++++++++++++++|++++|+||||.++|++++.++++ +
T Consensus 108 ~vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~ 183 (365)
T 3get_A 108 AFLQAGVTFAMYEIYAKQC---GAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVN 183 (365)
T ss_dssp EEEECSSCCTHHHHHHHHH---TCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSC
T ss_pred EEEEeCCChHHHHHHHHHc---CCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhCC
Confidence 9999999999988777766 999999998 6678 9999999999999999999999999999999999988888 6
Q ss_pred cCCEEEEeccccccc------ccccC----CCCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCcccccc
Q psy15216 165 KGVIFHCDAAQAVGK------IDINI----QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLR 232 (2602)
Q Consensus 165 ~g~~livD~a~a~g~------~~~dl----~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~ 232 (2602)
+|+++|+|++|+... .+.+. ...+.++++.|+||.+|++| +||+++++++++.+.....
T Consensus 184 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~--------- 254 (365)
T 3get_A 184 EDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRA--------- 254 (365)
T ss_dssp TTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSC---------
T ss_pred CCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcC---------
Confidence 799999999997322 22221 12345688999999888777 7999998877766654331
Q ss_pred ccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--
Q psy15216 233 SGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI-- 310 (2602)
Q Consensus 233 ~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L-- 310 (2602)
.++++.+...++.++++. ..++++..+++.++++++.+.|.+ . ++.+..+.. ..+.+.++..+..++...|
T Consensus 255 ~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~-~-g~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~ 327 (365)
T 3get_A 255 PFNVSNLALKAAVAAMDD-DEFTEKTLENNFSQMELYKEFAKK-H-NIKIIDSYT----NFITYFFDEKNSTDLSEKLLK 327 (365)
T ss_dssp TTCSCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHH-T-TCEECCCSS----SEEEEECSSSCHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHh-C-CCEECCCCC----eEEEEECCCCCHHHHHHHHHH
Confidence 235777777777788873 256788899999999999999988 3 777764322 2344445443666777777
Q ss_pred CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 311 KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 311 ~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+||.+++|..|. . +++|++++ +++|+++++++|++.
T Consensus 328 ~gi~v~~g~~~~-~-------------------~~iRis~~---~~~~i~~l~~~l~~~ 363 (365)
T 3get_A 328 KGIIIRNLKSYG-L-------------------NAIRITIG---TSYENEKFFTEFDKI 363 (365)
T ss_dssp TTEECEECGGGT-C-------------------SEEEEECC---CHHHHHHHHHHHHHH
T ss_pred CCEEEEECccCC-C-------------------CEEEEEcC---CHHHHHHHHHHHHHH
Confidence 799999887663 2 79999998 899999999999863
No 90
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.93 E-value=1e-24 Score=285.24 Aligned_cols=324 Identities=17% Similarity=0.152 Sum_probs=248.4
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccc----
Q psy15216 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF---- 81 (2602)
Q Consensus 6 ~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~---- 81 (2602)
.+++++.+.+++.+++...+.++.. ........+++++++++++|+++++|++++|+|+|+.+++.++...
T Consensus 39 ~~~~~~~v~~a~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~ 113 (397)
T 3f9t_A 39 CSNVLPITRKIVDIFLETNLGDPGL-----FKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREK 113 (397)
T ss_dssp CCCCCTHHHHHHHHHTTCCTTSGGG-----BHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHhhcCCCccc-----ChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhh
Confidence 4567788999999988654433321 1245677889999999999999899999999999999999998721
Q ss_pred -----cccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCcccccccH
Q psy15216 82 -----YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPI 155 (2602)
Q Consensus 82 -----~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l 155 (2602)
...+||+|+++.++|+++...+... |++++.++.++++.+|+++|++++++ +++++++++|+||||.+.|+
T Consensus 114 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 190 (397)
T 3f9t_A 114 RRKGLSKNEHPKIIVPITAHFSFEKGREMM---DLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNI 190 (397)
T ss_dssp HHTTCCCCSSCEEEEETTCCTHHHHHHHHH---TCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCH
T ss_pred hhhcccCCCCeEEEECCcchhHHHHHHHHc---CceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCH
Confidence 0124999999999999988888777 99999999998899999999999988 99999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecccccccc--------------cccCCCCCccEEEecccccc-CCCCcEEEEEecCC-CCccc
Q psy15216 156 LEIGELCRSKGVIFHCDAAQAVGKI--------------DINIQNYKVDLMSFSAHKIY-GPKGIGALYIRRNP-RTRIE 219 (2602)
Q Consensus 156 ~~I~~la~~~g~~livD~a~a~g~~--------------~~dl~~~~~D~~~~S~~K~~-Gp~G~G~l~~~~~~-~~~l~ 219 (2602)
++|.++|++||+++|+|++|+.+.. ++++.. ++|++++|+||++ ++.++|+++++++. .+.+.
T Consensus 191 ~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~ 269 (397)
T 3f9t_A 191 EELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYKRYLD 269 (397)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGGGGTC
T ss_pred HHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHHHHHhhc
Confidence 9999999999999999999986543 344444 7899999999965 56679999987653 33332
Q ss_pred ---ceecCCCccccccccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEE
Q psy15216 220 ---AQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLN 295 (2602)
Q Consensus 220 ---~~~~g~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~ 295 (2602)
+...++. .....++.+.....++.+++.. ...++++..++..++++++.+.|.+ . ++.+..++. ..+
T Consensus 270 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~-- 340 (397)
T 3f9t_A 270 VDAPYLTETR--QATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKE-N-NFKPVIEPI---LNI-- 340 (397)
T ss_dssp EECTTSSSSE--ECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCCS---SSE--
T ss_pred cCCccccCCC--ccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEcCCC---ccE--
Confidence 2221111 1122345555556666666663 3456788899999999999999988 4 766554422 223
Q ss_pred EEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 296 ISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 296 ~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+++...+..++.+.| +||.++++.. ++++||+++.+++++|+++++++|++.
T Consensus 341 ~~~~~~~~~~~~~~l~~~gi~v~~~~~----------------------~~~~Ri~~~~~~~~e~i~~~~~~l~~~ 394 (397)
T 3f9t_A 341 VAIEDEDYKEVCKKLRDRGIYVSVCNC----------------------VKALRIVVMPHIKREHIDNFIEILNSI 394 (397)
T ss_dssp EEEECTTHHHHHHHHHHTTCBCEECSS----------------------SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHhCCeEEeccCC----------------------CCEEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 334433456666666 7888876542 278999999999999999999999863
No 91
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.93 E-value=1.7e-25 Score=288.70 Aligned_cols=330 Identities=12% Similarity=0.105 Sum_probs=247.9
Q ss_pred ccCCCCCCCHHHHHHHHHHHhhccCCCCCccchh---HHHHHHHHHHHHHHHHHHhCCC-CCcEEEeCCH-HHHHHHHHH
Q psy15216 1398 FKDATTPIDPRVVDKMIPYLRVQFGNPASRNHIY---GWTAEKAIEKARNEVAQLIYAD-PREIIWTSGA-TESNNLAIK 1472 (2602)
Q Consensus 1398 L~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~---~~~~~~~~~~lr~~ia~~~g~~-~~~iv~t~ga-T~al~~al~ 1472 (2602)
++.+..+.|+.+++++.+.++.. .+++.+.|.. .+......+++++++++++|++ +++|++|+|+ |+|+..++.
T Consensus 7 ~~~g~~~~p~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~ 85 (360)
T 1w23_A 7 FNAGPSALPKPALERAQKELLNF-NDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPM 85 (360)
T ss_dssp CCSSSCCCCHHHHHHHHHTSSSS-TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHH
T ss_pred ecCCCcCCCHHHHHHHHHHhhhh-ccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHH
Confidence 34555688899999999988653 4555433322 4566678899999999999996 4689999999 999999999
Q ss_pred hhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHh-hccCCceEEEEeccccccccccC
Q psy15216 1473 GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEE-KICSDTILVSVMLVNNEIGVIQP 1550 (2602)
Q Consensus 1473 ~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~-~i~~~t~lv~l~~~~n~tG~~~~ 1550 (2602)
++... -++||+|+++.++|++. ..+...| +++.++.++ ++.+|++++++ +++++|++|+++|++||||.++|
T Consensus 86 ~l~~~-~~~g~~vi~~~~~~~~~----~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~ 159 (360)
T 1w23_A 86 NLLTK-GTIGNYVLTGSWSEKAL----KEAKLLG-ETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ 159 (360)
T ss_dssp HHCCT-TCEEEEEECSHHHHHHH----HHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECS
T ss_pred HhcCC-CCcccEEEecchhHHHH----HHHHHhC-CeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcceecc
Confidence 88711 03477888877666652 2234559 999999875 66789999999 99999999999999999999988
Q ss_pred hHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccccCCcc------
Q psy15216 1551 ILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHE------ 1624 (2602)
Q Consensus 1551 l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~------ 1624 (2602)
+++++||+++|+|++|+.+..++++..+ |++++|+||++||.|+|++++++++++.+.+.. ++...
T Consensus 160 -----~i~~~~~~~li~D~a~~~~~~~~~~~~~--di~~~s~sK~~~~~G~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 231 (360)
T 1w23_A 160 -----NFPEINHAPLIADMSSDILSRPLKVNQF--GMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQV-PTMLQYATHIK 231 (360)
T ss_dssp -----SCCCCCSSCEEEECTTTTTSSCCCGGGC--SEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTC-CGGGCHHHHHH
T ss_pred -----cccccCCceEEEechhhcCCCCcCcccC--CEEEEEcccccCCCCcEEEEEcHHHHhhcccCC-cchhhhhhhhh
Confidence 3444899999999999998877766544 899999999889999999999988776665533 11110
Q ss_pred ccCCCCCcchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCcE-EEeCCCCCCCCceEEEEEecC-CcH
Q psy15216 1625 YGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHNLNISFNFI-EGE 1700 (2602)
Q Consensus 1625 ~~~~~gt~~~~~~~al~~aL~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~gl-~i~~~~~~~~~~~~~~~~~~~-~~~ 1700 (2602)
.++..++++...++++.++++.... +++++.++++++++++.+.|.+ ++++ ....++....+....+.++.. +..
T Consensus 232 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (360)
T 1w23_A 232 SDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDE-SNGFYVGHAEKGSRSLMNVTFNLRNEELNQ 310 (360)
T ss_dssp TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT-TTTSSEESSCGGGBCSSEEEEECSSHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-ccCcccccCCchhccCcEEEEEcCCCccHH
Confidence 2345678899999999899986554 5788999999999999999987 6654 433112212232334444321 234
Q ss_pred HHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1701 SLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1701 ~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
++...| +||.+++|..+ .+++|||++.+++.+++++++++|++
T Consensus 311 ~~~~~l~~~gi~~~~~~~~---------------------~~~iRis~~~~~~~~~i~~~~~~l~~ 355 (360)
T 1w23_A 311 QFLAKAKEQGFVGLNGHRS---------------------VGGCRASIYNAVPIDACIALRELMIQ 355 (360)
T ss_dssp HHHHHHHHTTEESCBCCTT---------------------TCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeeeecCCCC---------------------CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 565555 79988765421 26899999999999999999999986
No 92
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.93 E-value=1.7e-24 Score=283.26 Aligned_cols=330 Identities=17% Similarity=0.154 Sum_probs=252.0
Q ss_pred eeccCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1396 IVFKDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1396 v~L~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
.++.....+.++.+.+++.+.+...++++.. + ....+...++++++++++|++++++++|+|+|+|+..++.++.
T Consensus 33 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~--~---~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~ 107 (397)
T 3f9t_A 33 NIFGSMCSNVLPITRKIVDIFLETNLGDPGL--F---KGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIK 107 (397)
T ss_dssp CBCSCSCCCCCTHHHHHHHHHTTCCTTSGGG--B---HHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHH
T ss_pred CeEEEecCCCcHHHHHHHHHHHhhcCCCccc--C---hhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHH
Confidence 3455555677788999999988764444432 1 2456778899999999999998999999999999999999987
Q ss_pred hh---------hccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEecccccc
Q psy15216 1476 HF---------YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEI 1545 (2602)
Q Consensus 1476 ~~---------~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~t 1545 (2602)
.. ...+||+|+++.++|+++...+... |++++.++.++++.+|+++|++++++ ++++|++++|+|||
T Consensus 108 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~npt 184 (397)
T 3f9t_A 108 NIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMM---DLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTEL 184 (397)
T ss_dssp HHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHH---TCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTT
T ss_pred HHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHc---CceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCC
Confidence 22 0124999999999999988887777 99999999998899999999999998 99999999999999
Q ss_pred ccccChHHHHHHhhhcCCEEEEecccccCcc--------------cccCCCCCccEEEEcccccc-CCCceEEEEEecCC
Q psy15216 1546 GVIQPILEIGELCRSKGVIFHCDAAQAVGKI--------------DINIQNYKVDLMSFSAHKIY-GPKGIGALYIRRNP 1610 (2602)
Q Consensus 1546 G~~~~l~~I~~ia~~~gi~vivD~a~~~g~~--------------~~~l~~~~~D~~v~S~~K~~-gp~G~G~l~~~~~~ 1610 (2602)
|.+.|+++|.++|++||+++|+|++|+.+.. ++++.. ++|++++|+||++ ++.++|+++++++.
T Consensus 185 G~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~ 263 (397)
T 3f9t_A 185 GTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIG 263 (397)
T ss_dssp CCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGG
T ss_pred CCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHH
Confidence 9999999999999999999999999986543 334444 7899999999955 56679999997653
Q ss_pred -CCcc---ccccccCCccccCCCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCC
Q psy15216 1611 -RTRI---EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNR 1685 (2602)
Q Consensus 1611 -~~~l---~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~ 1685 (2602)
.+.+ .+...++. .....++.+.....++.+++.. ...++++..++..++++++.+.|.+ . ++.+..++
T Consensus 264 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~--- 336 (397)
T 3f9t_A 264 YKRYLDVDAPYLTETR--QATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKE-N-NFKPVIEP--- 336 (397)
T ss_dssp GGGGTCEECTTSSSSE--ECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCC---
T ss_pred HHHhhccCCccccCCC--ccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEcCC---
Confidence 3333 22221111 1122355555566666666764 3456788889999999999999988 4 66654432
Q ss_pred CCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 1686 IPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 1763 (2602)
Q Consensus 1686 ~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~ 1763 (2602)
....+.+...+..++...| +||.++++.. .+++|++++.++|.+++++++++|+
T Consensus 337 --~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~----------------------~~~~Ri~~~~~~~~e~i~~~~~~l~ 392 (397)
T 3f9t_A 337 --ILNIVAIEDEDYKEVCKKLRDRGIYVSVCNC----------------------VKALRIVVMPHIKREHIDNFIEILN 392 (397)
T ss_dssp --SSSEEEEECTTHHHHHHHHHHTTCBCEECSS----------------------SSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred --CccEEEEEeCCHHHHHHHHHhCCeEEeccCC----------------------CCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 2223444444456666666 7888876542 1789999999999999999999998
Q ss_pred Hh
Q psy15216 1764 MK 1765 (2602)
Q Consensus 1764 ~~ 1765 (2602)
+.
T Consensus 393 ~~ 394 (397)
T 3f9t_A 393 SI 394 (397)
T ss_dssp HH
T ss_pred Hh
Confidence 73
No 93
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.93 E-value=8.3e-25 Score=282.90 Aligned_cols=306 Identities=11% Similarity=0.103 Sum_probs=243.3
Q ss_pred CCCHHHHHHHHHHHhh--hcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHHHHHhccccccc
Q psy15216 8 PIDPRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIKGAAHFYKK 84 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~--~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~-~~~~Iv~t~g~T~al~~~~~~l~~~~~~ 84 (2602)
++|+.+.+++.+.+.. ...++.. ...++|+++++++|+ ++++|++|+|+|+|+++++.++. +
T Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~-----------~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~----~ 107 (367)
T 3euc_A 43 RLPPALRSELAARLGEVALNRYPVP-----------SSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAA----R 107 (367)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCSCCC-----------CHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTC----C
T ss_pred CCCHHHHHHHHHHhhhhhhhcCCCC-----------cHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHc----C
Confidence 6789999999998874 3333332 257889999999999 77899999999999999999987 8
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCccccccc---HHHHHH
Q psy15216 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQP---ILEIGE 160 (2602)
Q Consensus 85 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~---l~~I~~ 160 (2602)
+||+|+++.+.|+++...+.. .|++++.++.++++.+|+++|++++++ ++++|++++|+||||.++| +++|++
T Consensus 108 ~gd~Vl~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~ 184 (367)
T 3euc_A 108 PGAKVMAPVPGFVMYAMSAQF---AGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVR 184 (367)
T ss_dssp TTCEEEEEESCSCCSCHHHHT---TTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred CCCEEEEcCCCHHHHHHHHHH---cCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHH
Confidence 999999999999998776654 499999999988889999999999988 8999999999999999986 666777
Q ss_pred HHHhc--CCEEEEecccccccc---cccCCCCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccccccc
Q psy15216 161 LCRSK--GVIFHCDAAQAVGKI---DINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRS 233 (2602)
Q Consensus 161 la~~~--g~~livD~a~a~g~~---~~dl~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 233 (2602)
+|++| |+++|+|++|+.... ...+...+.++++.|+||. +++| +||+++++++++.+.+.. ..
T Consensus 185 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~~~~---------~~ 254 (367)
T 3euc_A 185 AAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLDKVR---------PP 254 (367)
T ss_dssp HTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHGGGC---------CS
T ss_pred hhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHHHhC---------CC
Confidence 79999 999999999874221 1123334556889999998 7666 799999887766665433 23
Q ss_pred cCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--C
Q psy15216 234 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--K 311 (2602)
Q Consensus 234 gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~ 311 (2602)
++++.....++.++++. ..++++..++..++++++.+.|.+ +|++.+..+. ...+.+.++ +..++...| +
T Consensus 255 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~----~~~~~~~~~--~~~~l~~~l~~~ 326 (367)
T 3euc_A 255 YNVNVLTEATALFALEH-VAVLDEQAAQLRAERSRVAEGMAA-HGGVTVFPSA----ANFLLARVP--DAAQTFDRLLAR 326 (367)
T ss_dssp SCCCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHT-STTCEECCCS----SSEEEEECS--CHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHh-CCCcEECCCC----CeEEEEECC--CHHHHHHHHHHC
Confidence 45777777777788875 456788999999999999999987 6888865332 233444444 667777777 7
Q ss_pred CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 312 DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 312 gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
||.++++..|.+. ..+++||+++ +++|+++++++|++.
T Consensus 327 gi~v~~~~~~~~~-----------------~~~~iRis~~---~~~~i~~~~~~l~~~ 364 (367)
T 3euc_A 327 KVLIKNVSKMHPL-----------------LANCLRVTVS---TPEENAQFLEAFAAS 364 (367)
T ss_dssp TEECEECGGGCGG-----------------GTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred CeEEEECCccCCC-----------------CCCEEEEecC---CHHHHHHHHHHHHHH
Confidence 9999988876431 2489999987 899999999999863
No 94
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.93 E-value=5e-25 Score=287.03 Aligned_cols=337 Identities=12% Similarity=0.113 Sum_probs=248.8
Q ss_pred eeeeccCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCC----CCCcEEEeCCHHHHHHH
Q psy15216 1394 TNIVFKDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA----DPREIIWTSGATESNNL 1469 (2602)
Q Consensus 1394 ~~v~L~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~----~~~~iv~t~gaT~al~~ 1469 (2602)
....+.......++.+.+++.+.... + ..........+++++++++++. +++++++|+|+|+|+++
T Consensus 5 ~~~~~~p~p~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~ 74 (385)
T 2bkw_A 5 VDTLLIPGPIILSGAVQKALDVPSLG-----H-----TSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDI 74 (385)
T ss_dssp CCEECSSSSCCCCHHHHHTTSCCCCC-----T-----TSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHH
T ss_pred cceeecCCCcCchHHHHHHHhccccc-----c-----CCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHH
Confidence 33344445566777777777554321 1 1222234567788899998875 35789999999999999
Q ss_pred HHHhhhhhhccCCCEEEEcCCC-CcchHHHHHHHHhCCcEEEEecc-CCCCCcChhHHHhhccC-CceEEEEeccccccc
Q psy15216 1470 AIKGAAHFYKKRGKHIITVQTE-HKSVLDSIRKLENDGFRVTYLKP-KNNGLITLSQLEEKICS-DTILVSVMLVNNEIG 1546 (2602)
Q Consensus 1470 al~~l~~~~~~~gd~Vlv~~~~-~~s~~~~~~~~~~~G~~v~~v~~-~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG 1546 (2602)
++.++.. .+++||+|+++++. |+... ...+...|++++.++. +.++.+|+++|++++++ ++++|++++++||||
T Consensus 75 ~~~~~~~-~~~~gd~vlv~~~~~~~~~~--~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG 151 (385)
T 2bkw_A 75 FASNFIL-SKAPNKNVLVVSTGTFSDRF--ADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTA 151 (385)
T ss_dssp HHHHHSC-TTCSCCEEEEECSSHHHHHH--HHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTT
T ss_pred HHHHHhc-cCCCCCeEEEEcCCcchHHH--HHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcC
Confidence 9998741 12689999888543 33332 2334556999999998 77888999999999987 899999999999999
Q ss_pred cccChHHHHHHhhhc--CCEEEEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCC-cccc------
Q psy15216 1547 VIQPILEIGELCRSK--GVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRT-RIEA------ 1616 (2602)
Q Consensus 1547 ~~~~l~~I~~ia~~~--gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~-~l~~------ 1616 (2602)
.++|+++|.++|++| |+++|+|++|+.|..++++..+++|++++|+|| ++||+|+|+++++++.++ .+.+
T Consensus 152 ~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~ 231 (385)
T 2bkw_A 152 VLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHV 231 (385)
T ss_dssp EECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCC
T ss_pred eEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCC
Confidence 999999999999999 999999999999888777777889999999999 778999999999887655 4421
Q ss_pred ccccCC------------ccccCCCCCcchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-hhcCCcEEEeCCC
Q psy15216 1617 QIHGGG------------HEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGL-MESIEEIYINGDM 1682 (2602)
Q Consensus 1617 ~~~g~~------------~~~~~~~gt~~~~~~~al~~aL~~~~~-~~~~~~~~~~~l~~~l~~~L-~~~~~gl~i~~~~ 1682 (2602)
..+++. ...+...++++...+.++.++++.... ++++..++++++++++.+.| .+ + ++.+..+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~-g~~~~~~~ 309 (385)
T 2bkw_A 232 HGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNG-L-QLTSVSRY 309 (385)
T ss_dssp SCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-T-CCEESSCS
T ss_pred CceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHh-c-CceecccC
Confidence 111100 001223468888899888889986554 47888999999999999999 77 5 77776432
Q ss_pred C-C-CCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEe-cCC---CCCHHH
Q psy15216 1683 N-N-RIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT-IGR---FTTEKE 1754 (2602)
Q Consensus 1683 ~-~-~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls-~~~---~~t~ed 1754 (2602)
. . ..+....+.++. ..++...| +||.+++|..+.. ..+++|+| ++. .+|.+|
T Consensus 310 ~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi~v~~g~~~~~------------------~~~~iRis~~~~~~~~~~~e~ 369 (385)
T 2bkw_A 310 PSNMSAHGLTAVYVAD--PPDVIAFLKSHGVVIAGGIHKDI------------------GPKYIRIGHMGVTACNKNLPY 369 (385)
T ss_dssp SSTTBCSSCEEEECSC--HHHHHHHHHHTTEECBCCCCTTT------------------GGGEEEECCCGGGTSSTTCTH
T ss_pred cccccCCceEEEecCC--HHHHHHHHHHCCeEEeCCCCccc------------------CCCEEEEEccccccccCCHHH
Confidence 1 1 234444555543 55666666 7999988765321 13789999 652 479999
Q ss_pred HHHHHHHHHHh
Q psy15216 1755 IDFTIKLLKMK 1765 (2602)
Q Consensus 1755 id~li~~L~~~ 1765 (2602)
+++++++|++.
T Consensus 370 i~~~~~~l~~~ 380 (385)
T 2bkw_A 370 MKNCFDLIKLA 380 (385)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999873
No 95
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.93 E-value=6.8e-25 Score=282.23 Aligned_cols=304 Identities=14% Similarity=0.098 Sum_probs=240.7
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
++|+.+.+++.+.+...+.+| ....+++|+++++++|+++++|++|+|+++|+++++.++. ++||
T Consensus 29 ~~~~~v~~a~~~~~~~~~~y~-----------~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~----~~gd 93 (354)
T 3ly1_A 29 GMSPKAQAAARDAVVKANRYA-----------KNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYA----SLEA 93 (354)
T ss_dssp CCCHHHHHHHHHTGGGTTSCC-----------HHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHC----CTTC
T ss_pred CCCHHHHHHHHHHHhhCcCCC-----------CCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHh----CCCC
Confidence 688999999998886533332 1356889999999999988999999999999999999987 7999
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhcc--CCceEEEEecccCcccccccHHHHHHHHHh-
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC--SDTILVSVMLVNNEIGVIQPILEIGELCRS- 164 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~--~~tklv~i~~~~npTG~~~~l~~I~~la~~- 164 (2602)
+|+++.+.|+++...++.. |++++.++.++++.+|+++|+++++ +++++|++++|+||||.++|.+++.++++.
T Consensus 94 ~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 170 (354)
T 3ly1_A 94 QLVIPELTYGDGEHFAKIA---GMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASK 170 (354)
T ss_dssp EEEEESSSCTHHHHHHHHT---TCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTC
T ss_pred eEEECCCCchHHHHHHHHc---CCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC
Confidence 9999999999987666554 9999999998889999999999998 899999999999999999999998888887
Q ss_pred -cCCEEEEecccccccccc---c----CCCC-CccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccccccc
Q psy15216 165 -KGVIFHCDAAQAVGKIDI---N----IQNY-KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRS 233 (2602)
Q Consensus 165 -~g~~livD~a~a~g~~~~---d----l~~~-~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 233 (2602)
||+++|+|++|+.....- . +... +.++++.|+||.+|++| +||+++++++++.+.... ..
T Consensus 171 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~---------~~ 241 (354)
T 3ly1_A 171 PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYV---------AG 241 (354)
T ss_dssp CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGT---------TC
T ss_pred CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhc---------CC
Confidence 999999999997543211 1 1122 45689999999888776 799999887766665433 12
Q ss_pred cCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--C
Q psy15216 234 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--K 311 (2602)
Q Consensus 234 gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~ 311 (2602)
++++.....++.++++.. .++++..+++.++++++.+.|.+ . ++.+..+. ..++.+.++. +..++...| +
T Consensus 242 ~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~-~-~~~~~~~~----~~~~~~~~~~-~~~~~~~~l~~~ 313 (354)
T 3ly1_A 242 EKINFSGVDAALASMNDS-AFITYSKKSNDVSRQILLKALED-L-KLPYLPSE----GNFVFHQLVV-PLKDYQTHMADA 313 (354)
T ss_dssp SCCCHHHHHHHHHHTTCH-HHHHHHHHHHHHHHHHHHHHHHH-H-TCCBCCCC----SSEEEEECSS-CHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHH-C-CCeECCCC----ceEEEEECCC-CHHHHHHHHHHC
Confidence 577888888777787733 56788889999999999999987 3 66554321 2334444443 566777666 7
Q ss_pred CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 312 DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 312 gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
||.++ |..+.. .+++||+++ +++|+++++++|++.
T Consensus 314 gi~v~-g~~~~~-------------------~~~iRis~~---~~~~i~~~~~~l~~~ 348 (354)
T 3ly1_A 314 GVLIG-RAFPPA-------------------DNWCRISLG---TPQEMQWVADTMREF 348 (354)
T ss_dssp TEECC-CCCTTC-------------------TTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred CEEEe-ecCCCC-------------------CCEEEEEcC---CHHHHHHHHHHHHHH
Confidence 99988 654422 389999987 899999999999964
No 96
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.93 E-value=1.9e-24 Score=276.13 Aligned_cols=306 Identities=16% Similarity=0.156 Sum_probs=235.4
Q ss_pred CCCCCCC-CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 1 MDYSATT-PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 1 Ld~a~~~-~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
|+.+.++ ++++.+.+++.+.+.....+|. ....++|+++++++|+++++|++|+|+++++++++.++
T Consensus 21 l~~n~~~~~~~~~v~~a~~~~~~~~~~y~~-----------~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~- 88 (337)
T 3p1t_A 21 LAFNENPEAVEPRVQAAIAAAAARINRYPF-----------DAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF- 88 (337)
T ss_dssp CSSCCCCSCCCHHHHHHHHHHGGGTTSCCT-----------THHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS-
T ss_pred eeCCCCCCCCCHHHHHHHHHhhhhhccCCC-----------CchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc-
Confidence 4555544 7889999999998765444432 24678999999999998899999999999999999875
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHH
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIG 159 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~ 159 (2602)
+||+|+++.|.|+++...++ ..|++++.++.++++.+|+++++++ .+++++++++|+||||.++|++++.
T Consensus 89 -----~gd~vl~~~p~~~~~~~~~~---~~g~~~~~v~~~~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~ 158 (337)
T 3p1t_A 89 -----SSMRFVTAWPGFDGYRARIA---VSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELD 158 (337)
T ss_dssp -----TTSEEEEESSSCSHHHHHHT---TSCCEEEEECBCTTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHHHHH
T ss_pred -----CCCeEEEeCCCcHHHHHHHH---HcCCEEEEecCCCCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 69999999999999766554 4599999999988889999999887 5789999999999999999999999
Q ss_pred HHHHhcCCEEEEeccccc--ccccccCCCCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccccccccC
Q psy15216 160 ELCRSKGVIFHCDAAQAV--GKIDINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGT 235 (2602)
Q Consensus 160 ~la~~~g~~livD~a~a~--g~~~~dl~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt 235 (2602)
++|+++++ +++|++|+. +..+......+.++++.|+||.+|++| +||+++++++++.+.+.. ..++
T Consensus 159 ~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~---------~~~~ 228 (337)
T 3p1t_A 159 QLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ---------WFCN 228 (337)
T ss_dssp HHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTS---------CTTC
T ss_pred HHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhc---------CCCC
Confidence 99999997 566999873 222222233356799999999888777 699999887766665332 2356
Q ss_pred cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCe
Q psy15216 236 LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDI 313 (2602)
Q Consensus 236 ~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI 313 (2602)
++.++..++.++++.. ..+++..++..++++++.+.|.+ . ++.+..+.. .++++...+...+...| +||
T Consensus 229 ~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~------~~~~~~~~~~~~~~~~l~~~gi 299 (337)
T 3p1t_A 229 VGTLDLHALEAALDND-RAREAHIAKTLAQRRRVADALRG-L-GYRVASSEA------NFVLVENAAGERTLRFLRERGI 299 (337)
T ss_dssp SCHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHHHHHHHHH-T-TCCBCCCSS------SEEEEECTTTHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHH-C-cCEECCCCC------eEEEEEcCCHHHHHHHHHHCCe
Confidence 7777777776777632 23566677778888899999987 3 665543322 23444444555565555 799
Q ss_pred EEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 314 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 314 ~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.+++|..|..+ +++|||++ +++|+++++++|++.
T Consensus 300 ~v~~g~~~~~~-------------------~~iRis~~---~~~~~~~l~~al~~~ 333 (337)
T 3p1t_A 300 QVKDAGQFGLH-------------------HHIRISIG---REEDNDRLLAALAEY 333 (337)
T ss_dssp ECEEGGGGTCC-------------------SEEEEECC---CHHHHHHHHHHHHHH
T ss_pred EEEECccCCCC-------------------CeEEEecC---CHHHHHHHHHHHHHH
Confidence 99999877542 79999998 799999999999863
No 97
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.93 E-value=1.7e-24 Score=282.61 Aligned_cols=319 Identities=12% Similarity=0.145 Sum_probs=247.0
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhcccccccC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g--~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~ 85 (2602)
++|+.+.+++.+.+.... +.++....+..+++++++++++| +++++|++|+|+|+|+++++.++. ++
T Consensus 45 ~~~~~v~~a~~~~~~~~~-------~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~----~~ 113 (391)
T 4dq6_A 45 KAAPCIIDSLKNRLEQEI-------YGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELT----KA 113 (391)
T ss_dssp CCCHHHHHHHHHHHTTCC-------CCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS----CT
T ss_pred CCCHHHHHHHHHHHhCCC-------CCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhC----CC
Confidence 678999999999886421 11111235678889999999999 678899999999999999999987 89
Q ss_pred CCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccC--C--CCccChHHHHhhccCCceEEEEecccCccccccc---HHHH
Q psy15216 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--N--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEI 158 (2602)
Q Consensus 86 gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~--~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l~~I 158 (2602)
||+|+++.+.|+++...+... |++++.++.+ . ++.+|++++++++++ +++|++++|+||||.++| +++|
T Consensus 114 gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i 189 (391)
T 4dq6_A 114 NDKIMIQEPVYSPFNSVVKNN---NRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELKKL 189 (391)
T ss_dssp TCEEEECSSCCTHHHHHHHHT---TCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHHHHc---CCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHHHH
Confidence 999999999999987766654 9999999987 2 345899999999988 999999999999999965 7778
Q ss_pred HHHHHhcCCEEEEeccccccc----ccccCCCCCc-----cEEEeccccccCCCC--cEEEEEec-CCCCcccceecCCC
Q psy15216 159 GELCRSKGVIFHCDAAQAVGK----IDINIQNYKV-----DLMSFSAHKIYGPKG--IGALYIRR-NPRTRIEAQIHGGG 226 (2602)
Q Consensus 159 ~~la~~~g~~livD~a~a~g~----~~~dl~~~~~-----D~~~~S~~K~~Gp~G--~G~l~~~~-~~~~~l~~~~~g~~ 226 (2602)
.++|++||+++|+|++|+... .+..+..+.. .+++.|+||.+|++| +|++++++ ++.+.+.+...
T Consensus 190 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--- 266 (391)
T 4dq6_A 190 GDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFT--- 266 (391)
T ss_dssp HHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHH---
T ss_pred HHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHH---
Confidence 888999999999999997632 2223333333 388999999888766 79998876 56655554321
Q ss_pred ccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--cChh
Q psy15216 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGE 304 (2602)
Q Consensus 227 ~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~--~~~~ 304 (2602)
.+..++++.+...++.++++....++++..++++++++++.+.|.+.+|++.+..+... ...++.++. .+..
T Consensus 267 ---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 340 (391)
T 4dq6_A 267 ---RIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGT---YLLWVDFSALGLSDE 340 (391)
T ss_dssp ---HTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBS---SEEEEECGGGCCCHH
T ss_pred ---hhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCcc---EEEEEEhhhcCCCHH
Confidence 11245677788877778887545567888999999999999999875688888755432 233455553 4667
Q ss_pred HHHHHh--C-CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 305 SLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 305 ~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++...| + ||.+++|..|... ..+++||+++ ++++++++++++|++.
T Consensus 341 ~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRis~~--~~~~~i~~~l~~l~~~ 389 (391)
T 4dq6_A 341 ELESILVQKGKVALNQGNSFGIG-----------------GSGYQRINLA--CPRSMLEEALIRIKNA 389 (391)
T ss_dssp HHHHHHHHTTCEECEEGGGGCTT-----------------CTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEeeCchhhCCC-----------------CCCeEEEEEc--CCHHHHHHHHHHHHHH
Confidence 777777 5 9999999877542 1389999998 6899999999999863
No 98
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.93 E-value=7.5e-25 Score=285.41 Aligned_cols=331 Identities=12% Similarity=0.114 Sum_probs=245.7
Q ss_pred CCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC----CCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 4 SATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA----DPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 4 a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~----~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
.+..++++.+.+++.+.+.. + ..........+++++++++++. ++++|++|+|+|+|+++++.++.
T Consensus 11 p~p~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~ 80 (385)
T 2bkw_A 11 PGPIILSGAVQKALDVPSLG-----H-----TSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFI 80 (385)
T ss_dssp SSSCCCCHHHHHTTSCCCCC-----T-----TSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHS
T ss_pred CCCcCchHHHHHHHhccccc-----c-----CCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHh
Confidence 34446677777776554321 1 1122234567788888888875 35789999999999999999875
Q ss_pred cccccCCCEEEEcCC-CCcccHHHHHHHHhCCcEEEEecc-CCCCccChHHHHhhccC-CceEEEEecccCcccccccHH
Q psy15216 80 HFYKKRGKHIITVQT-EHKSVLDSIRKLENDGFRVTYLKP-KNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPIL 156 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~-~~~s~~~~~~~~~~~G~~v~~v~~-~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l~ 156 (2602)
. .+++||+|+++.+ .|+... ...++..|++++.+++ ++++.+|+++|++++++ ++++|++++++||||.++|++
T Consensus 81 ~-~~~~gd~vlv~~~~~~~~~~--~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~ 157 (385)
T 2bkw_A 81 L-SKAPNKNVLVVSTGTFSDRF--ADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLK 157 (385)
T ss_dssp C-TTCSCCEEEEECSSHHHHHH--HHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHH
T ss_pred c-cCCCCCeEEEEcCCcchHHH--HHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHH
Confidence 1 1268999988744 333321 2344556999999998 77888999999999986 899999999999999999999
Q ss_pred HHHHHHHhc--CCEEEEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCC-cccc------eecCCC
Q psy15216 157 EIGELCRSK--GVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRT-RIEA------QIHGGG 226 (2602)
Q Consensus 157 ~I~~la~~~--g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~-~l~~------~~~g~~ 226 (2602)
+|.++|++| |+++|+|++|+.+..++++..+++|++++|+|| ++||+|+|+++++++.++ .+.+ ..+++.
T Consensus 158 ~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~ 237 (385)
T 2bkw_A 158 AISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSS 237 (385)
T ss_dssp HHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTC
T ss_pred HHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCceeec
Confidence 999999999 999999999999888878877889999999999 677999999999987655 4421 111110
Q ss_pred c------------cccccccCcchhHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHH-hhccCceEEeCCC-CC-CC
Q psy15216 227 H------------EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGL-MESIEEIYINGDM-NN-RI 290 (2602)
Q Consensus 227 ~------------~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L-~~~~~g~~l~~~~-~~-~~ 290 (2602)
. ......++++..+++++.++++.... ++++..++++++++++.+.| .+ + ++++..+. .. ..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~-g~~~~~~~~~~~~~ 315 (385)
T 2bkw_A 238 LRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNG-L-QLTSVSRYPSNMSA 315 (385)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-T-CCEESSCSSSTTBC
T ss_pred HHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHh-c-CceecccCcccccC
Confidence 0 01112468888898888889986543 47888999999999999999 77 5 78877532 11 23
Q ss_pred CceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEe-cCC---CCCHHHHHHHHH
Q psy15216 291 PHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT-IGR---FTTEKEIDFTIK 364 (2602)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis-~~~---~~t~edid~li~ 364 (2602)
+.++.+.++. ..++.+.| +||.+++|..+.. ..+++||+ ++. .++++|++++++
T Consensus 316 ~~~~~~~~~~--~~~~~~~l~~~gi~v~~g~~~~~------------------~~~~iRis~~~~~~~~~~~e~i~~~~~ 375 (385)
T 2bkw_A 316 HGLTAVYVAD--PPDVIAFLKSHGVVIAGGIHKDI------------------GPKYIRIGHMGVTACNKNLPYMKNCFD 375 (385)
T ss_dssp SSCEEEECSC--HHHHHHHHHHTTEECBCCCCTTT------------------GGGEEEECCCGGGTSSTTCTHHHHHHH
T ss_pred CceEEEecCC--HHHHHHHHHHCCeEEeCCCCccc------------------CCCEEEEEccccccccCCHHHHHHHHH
Confidence 4455555543 56676666 7999987764321 13789999 652 479999999999
Q ss_pred HHHhh
Q psy15216 365 LLKMK 369 (2602)
Q Consensus 365 ~L~~~ 369 (2602)
+|++.
T Consensus 376 ~l~~~ 380 (385)
T 2bkw_A 376 LIKLA 380 (385)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 99
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.93 E-value=2.6e-24 Score=277.73 Aligned_cols=307 Identities=17% Similarity=0.099 Sum_probs=241.9
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccC
Q psy15216 1402 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 1481 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~ 1481 (2602)
..+.++.+.+++.+.++....+|+. ...++|+++++++++++++|++|+|+|+|++.++.++. ++
T Consensus 43 ~~~~~~~v~~a~~~~~~~~~~y~~~-----------~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~----~~ 107 (363)
T 3ffh_A 43 PLGTSKKVAAIQANSSVETEIYPDG-----------WASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLL----DT 107 (363)
T ss_dssp TTCCCHHHHHHHHTCBSCCCBC---------------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC----ST
T ss_pred CCCCCHHHHHHHHHHHHHhhcCCCc-----------chHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHc----cC
Confidence 3467888999988866543334332 35789999999999988999999999999999999986 89
Q ss_pred CCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhc
Q psy15216 1482 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK 1561 (2602)
Q Consensus 1482 gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~ 1561 (2602)
||+|+++.++|+++...++.. |++++.++.++++.+|+++++++++++|++|++++|+||||.++|+++|.++++.+
T Consensus 108 gd~vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~ 184 (363)
T 3ffh_A 108 TTNTVMATPTFVQYRQNALIE---GAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRV 184 (363)
T ss_dssp TCEEEEEESSCHHHHHHHHHH---TCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTS
T ss_pred CCEEEEcCCChHHHHHHHHHc---CCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC
Confidence 999999999999987777666 99999999988888999999999999999999999999999999999999999887
Q ss_pred --CCEEEEecccccCcc-----cccC-CCCCccEEEEccccccCCCce--EEEEEecCCCCccccccccCCccccCCCCC
Q psy15216 1562 --GVIFHCDAAQAVGKI-----DINI-QNYKVDLMSFSAHKIYGPKGI--GALYIRRNPRTRIEAQIHGGGHEYGLRSGT 1631 (2602)
Q Consensus 1562 --gi~vivD~a~~~g~~-----~~~l-~~~~~D~~v~S~~K~~gp~G~--G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt 1631 (2602)
|+++|+|++|+.... .... ...+..+++.|++|.+|++|+ |++++++++++.+.+.. ..++
T Consensus 185 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~---------~~~~ 255 (363)
T 3ffh_A 185 PSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVR---------PPFN 255 (363)
T ss_dssp CTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTC---------CSCC
T ss_pred CCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhC---------CCCC
Confidence 999999999983221 1111 122345788899998888885 99999887666655432 1346
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCE
Q psy15216 1632 LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDI 1709 (2602)
Q Consensus 1632 ~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI 1709 (2602)
++...+.++.++|+.. .++++..+++.++++++.+.|.+ .+++.+..+. .....+.++. +..++...| +||
T Consensus 256 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~----~~~~~~~~~~-~~~~~~~~l~~~gi 328 (363)
T 3ffh_A 256 TTSIGQKLAIEAIKDQ-AFIGECRTSNANGIKQYEAFAKR-FEKVKLYPAN----GNFVLIDLGI-EAGTIFSYLEKNGY 328 (363)
T ss_dssp CBHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHH-CTTCEECCCC----SSEEEEECSS-CHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHhh-CCCceECCCC----CeEEEEECCC-CHHHHHHHHHHCCe
Confidence 7777777777888732 55788889999999999999987 6788776332 2233333332 556666666 899
Q ss_pred EEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1710 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1710 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.+++|..|..+ +++|++++ |.+|+++++++|++
T Consensus 329 ~v~~g~~~~~~-------------------~~iRis~~---~~~~i~~~~~~l~~ 361 (363)
T 3ffh_A 329 ITRSGAALGFP-------------------TAVRITIG---KEEDNSAVIALLEK 361 (363)
T ss_dssp ECEETTTTTCT-------------------TEEEEECC---CHHHHHHHHHHHHH
T ss_pred EEEeCccCCCC-------------------CeEEEECC---CHHHHHHHHHHHHH
Confidence 99998876433 89999987 89999999999986
No 100
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.92 E-value=1.9e-24 Score=282.11 Aligned_cols=319 Identities=15% Similarity=0.125 Sum_probs=246.8
Q ss_pred CCCHHHHHHHHHHHhhh-cCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhccccccc
Q psy15216 8 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFYKK 84 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~-~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g--~~~~~Iv~t~g~T~al~~~~~~l~~~~~~ 84 (2602)
++|+.+.+++.+.+... +.++ ....+..+++++++++.+| +++++|++|+|+|+|+++++.++. +
T Consensus 40 ~~~~~v~~a~~~~~~~~~~~y~--------~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~----~ 107 (391)
T 3dzz_A 40 KIAPEIMASMEEKLKVAAFGYE--------SVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFT----S 107 (391)
T ss_dssp CCCHHHHHHHHHHHTTCCCCCB--------CCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHS----C
T ss_pred CCCHHHHHHHHHHHhcCcCCCC--------CCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhC----C
Confidence 68899999999988642 1111 1134577888888888888 677899999999999999999987 8
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC---CCccChHHHHhhcc-CCceEEEEecccCcccccc---cHHH
Q psy15216 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN---NGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQ---PILE 157 (2602)
Q Consensus 85 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~---~~~ld~e~l~~~i~-~~tklv~i~~~~npTG~~~---~l~~ 157 (2602)
+||+|+++.++|+++...+... |++++.++.++ ++.+|+++|+++++ +++++|++++|+||||.++ ++++
T Consensus 108 ~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~ 184 (391)
T 3dzz_A 108 PGDQILVQEPVYNMFYSVIEGN---GRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKR 184 (391)
T ss_dssp TTCEEEECSSCCHHHHHHHHHT---TCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred CCCeEEECCCCcHHHHHHHHHc---CCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHH
Confidence 9999999999999987766654 99999999852 23489999999998 7999999999999999995 5788
Q ss_pred HHHHHHhcCCEEEEeccccccc----ccccCCCCC---cc--EEEeccccccCCCC--cEEEEEe-cCCCCcccceecCC
Q psy15216 158 IGELCRSKGVIFHCDAAQAVGK----IDINIQNYK---VD--LMSFSAHKIYGPKG--IGALYIR-RNPRTRIEAQIHGG 225 (2602)
Q Consensus 158 I~~la~~~g~~livD~a~a~g~----~~~dl~~~~---~D--~~~~S~~K~~Gp~G--~G~l~~~-~~~~~~l~~~~~g~ 225 (2602)
|+++|++||+++|+|++|+... .+.++..++ +| +++.|+||.+|++| +|+++++ +++.+.+.+...
T Consensus 185 i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~-- 262 (391)
T 3dzz_A 185 IAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFF-- 262 (391)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHH--
T ss_pred HHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHH--
Confidence 8999999999999999997532 223333332 45 89999999888666 8999987 666666554321
Q ss_pred CccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--cCh
Q psy15216 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEG 303 (2602)
Q Consensus 226 ~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~--~~~ 303 (2602)
....++++.....++.++++....++++..++..++++++.+.|.+.+|++.+..+... ...++.++. .+.
T Consensus 263 ----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 335 (391)
T 3dzz_A 263 ----LAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNAS---YLAWVDISALGMNA 335 (391)
T ss_dssp ----HHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBS---SEEEEECGGGCSCH
T ss_pred ----hhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCce---EEEEEehhhcCCCH
Confidence 11234677778777778887545567889999999999999999874678888755432 334455553 466
Q ss_pred hHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 304 ESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 304 ~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++...| +||.+++|..|... ..+++||+++ ++++++++++++|++.
T Consensus 336 ~~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRis~~--~~~~~i~~~l~~l~~~ 385 (391)
T 3dzz_A 336 EDFCKYLREKTGLIISAGNGYRGN-----------------GHEFVRINLA--CPKELVIDGMQRLKQG 385 (391)
T ss_dssp HHHHHHHHHHHCEECEESGGGCTT-----------------GGGEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEeCchhhCCC-----------------CCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 6777666 59999999877642 1388999998 6899999999999863
No 101
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.92 E-value=1.2e-23 Score=279.17 Aligned_cols=337 Identities=13% Similarity=-0.002 Sum_probs=246.4
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCc-----EEEeCCHHHHHHHHHHhcccc
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE-----IIWTSGATESNNLAIKGAAHF 81 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~-----Iv~t~g~T~al~~~~~~l~~~ 81 (2602)
+++++.+.+++.+++.....++ ..+.....+.+++++++++++|+++++ +++|+|+|+|+.+++.++...
T Consensus 52 ~~~~~~v~e~~~~a~~~~~~~~-----~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~ 126 (452)
T 2dgk_A 52 TWDDENVHKLMDLSINKNWIDK-----EEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWR 126 (452)
T ss_dssp CCCCHHHHHHHHHTTTCBTTCT-----TTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhccCCCCh-----hhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHH
Confidence 3566788888877765322222 223455677889999999999997765 999999999999999887521
Q ss_pred cc----cCC-----CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHhhccCCceEEEEecccCcccc
Q psy15216 82 YK----KRG-----KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGV 151 (2602)
Q Consensus 82 ~~----~~g-----d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~~i~~~tklv~i~~~~npTG~ 151 (2602)
.. .+| ++|++++ .|+++...+..+ |++++.+++++ ++.+|+++|+++|+++|++|++++|+||||.
T Consensus 127 ~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~---G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~ 202 (452)
T 2dgk_A 127 WRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYW---DVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGN 202 (452)
T ss_dssp HHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHT---TCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCB
T ss_pred HHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHc---CceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcc
Confidence 10 144 6999999 999988777665 99999999887 7899999999999999999999999999999
Q ss_pred cccHHHHHHHHHhc------CCEEEEecccccccc-------cccCCCCCccEEEeccccc-cCCCCcEEEEEecC-CC-
Q psy15216 152 IQPILEIGELCRSK------GVIFHCDAAQAVGKI-------DINIQNYKVDLMSFSAHKI-YGPKGIGALYIRRN-PR- 215 (2602)
Q Consensus 152 ~~~l~~I~~la~~~------g~~livD~a~a~g~~-------~~dl~~~~~D~~~~S~~K~-~Gp~G~G~l~~~~~-~~- 215 (2602)
+.|+++|+++|++| |+++|+|++|+.+.. +.++...++|++++|+||+ ++|.|+|+++++++ ..
T Consensus 203 ~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~ 282 (452)
T 2dgk_A 203 YEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALP 282 (452)
T ss_dssp BCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSC
T ss_pred cCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHHH
Confidence 99999999999995 999999999987643 2343334789999999994 47889999999754 33
Q ss_pred Cccc--ceecCCCccccccccCcchhHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCC-CCC
Q psy15216 216 TRIE--AQIHGGGHEYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN-RIP 291 (2602)
Q Consensus 216 ~~l~--~~~~g~~~~~~~~~gt~~~~~~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~-~~~ 291 (2602)
+.+. +.+.++........++.+....+++.+++. +..+++++..+++.++++++.+.|.+ .++++++.+... ...
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~~~~~~ 361 (452)
T 2dgk_A 283 QELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAK-LGPYEFICTGRPDEGI 361 (452)
T ss_dssp GGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSSEEEEEECCTTTBS
T ss_pred HHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEecCCCCCCCe
Confidence 3332 222222111111234555545666666776 34567889999999999999999988 678988754210 123
Q ss_pred ceEEEEEccc-----ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHH
Q psy15216 292 HNLNISFNFI-----EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIK 364 (2602)
Q Consensus 292 ~~~~~~~~~~-----~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~ 364 (2602)
+++.|.++.. +..++...| +||.++... .+. ... ..+++|++++.++|++|++++++
T Consensus 362 ~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~--~~~-----------~~~---~~~~lRis~~~~~t~e~id~li~ 425 (452)
T 2dgk_A 362 PAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFT--LGG-----------EAT---DIVVMRIMCRRGFEMDFAELLLE 425 (452)
T ss_dssp SEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEE--CST-----------TCT---TCEEEEEECCTTCCHHHHHHHHH
T ss_pred EEEEEEecCcccccCCHHHHHHHHHhcCCeeeeee--CCc-----------ccC---CeEEEEEEecCCCCHHHHHHHHH
Confidence 4566666542 336777777 688765321 111 000 13689999999999999999999
Q ss_pred HHHhh
Q psy15216 365 LLKMK 369 (2602)
Q Consensus 365 ~L~~~ 369 (2602)
.|++.
T Consensus 426 ~l~~~ 430 (452)
T 2dgk_A 426 DYKAS 430 (452)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 102
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.92 E-value=2.1e-24 Score=280.51 Aligned_cols=313 Identities=17% Similarity=0.151 Sum_probs=242.8
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
++|+.+.+++.+.+.....++.. ....++|+.+++++++++++|++|+|+++|+++++.++. ++||
T Consensus 38 ~~~~~v~~a~~~~~~~~~~y~~~----------~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~----~~gd 103 (381)
T 1v2d_A 38 PPPPFLLEAVRRALGRQDQYAPP----------AGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLV----GPGD 103 (381)
T ss_dssp CCCHHHHHHHHHHTTTSCSCCCT----------TCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHC----CTTC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCC----------CCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhC----CCCC
Confidence 56889999999887641112111 124678999999999988899999999999999999987 7999
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccC---CCCccChHHHHhhccCCceEEEEecccCccccccc---HHHHHHH
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPK---NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGEL 161 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~---~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l~~I~~l 161 (2602)
+|+++.++|+++...++. .|++++.++.+ +++.+|+++|++++++++++|++++|+||||.++| +++|.++
T Consensus 104 ~Vl~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~ 180 (381)
T 1v2d_A 104 EVVVLEPFFDVYLPDAFL---AGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARL 180 (381)
T ss_dssp EEEEEESCCTTHHHHHHH---TTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEEEcCCCchhHHHHHHH---cCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHH
Confidence 999999999998765544 49999999986 45779999999999999999999999999999987 7889999
Q ss_pred HHhcCCEEEEeccccccc---ccccCC--CCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCcccccccc
Q psy15216 162 CRSKGVIFHCDAAQAVGK---IDINIQ--NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSG 234 (2602)
Q Consensus 162 a~~~g~~livD~a~a~g~---~~~dl~--~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~g 234 (2602)
|++||+++|+|++|+... .+.++. ..+.|+++.|+||.+|++| +||+++++++++.+.... ....+
T Consensus 181 ~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~-------~~~~~ 253 (381)
T 1v2d_A 181 ARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMR-------QWTSF 253 (381)
T ss_dssp HHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHH-------HHHTS
T ss_pred HHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHH-------hhccc
Confidence 999999999999997542 222222 3467999999999888888 899999988776665432 11234
Q ss_pred CcchhHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--
Q psy15216 235 TLATHQIVGMGEAFRLA--RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI-- 310 (2602)
Q Consensus 235 t~~~~~~~al~~al~~~--~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L-- 310 (2602)
+++.+...++.++|+.. ..++++..+++.++++++.+.|.+ .++.+..+.. ..+..+.++..+ +...+
T Consensus 254 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~---~~~~~~~~~~~~---~~~~l~~ 325 (381)
T 1v2d_A 254 SAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA--MGLRVYVPEG---TYFLMAELPGWD---AFRLVEE 325 (381)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH--TTCCEECCSB---SSEEEEECTTCC---HHHHHHH
T ss_pred CCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHH--CCCEecCCCc---ceEEEEecChHh---HHHHHHh
Confidence 66777777777888754 456788999999999999999988 5777765432 223344444332 43333
Q ss_pred CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 311 KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 311 ~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+||.+++|..|... ....+++||+++. +++++++++++|++.
T Consensus 326 ~gi~v~~g~~~~~~---------------~~~~~~iRi~~~~--~~~~i~~~~~~l~~~ 367 (381)
T 1v2d_A 326 ARVALIPASAFYLE---------------DPPKDLFRFAFCK--TEEELHLALERLGRV 367 (381)
T ss_dssp TCEECEEGGGGCSS---------------SCCTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCEEEecchHhCCC---------------CCCCCEEEEEeCC--CHHHHHHHHHHHHHH
Confidence 79999998877541 0123789999986 899999999999863
No 103
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.92 E-value=3.7e-24 Score=278.49 Aligned_cols=312 Identities=14% Similarity=0.091 Sum_probs=233.2
Q ss_pred CCCHHHHHHHHHHHhhhc-CCCCCCCcchhhhHHHHHHHHHHHHHHHh----CC--CCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 8 PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLI----YA--DPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~-~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g~--~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
++|+.+.+++.+.+.... .++. .. ...++|+.+++++ |+ ++++|++|+|+++|+++++.++.
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~y~~------~~----g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~- 112 (385)
T 1b5p_A 44 DTPEHVKEAARRALAQGKTKYAP------PA----GIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL- 112 (385)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCC------TT----CCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhcCCCCCCC------CC----CCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhc-
Confidence 457888999888875421 1211 11 1244555555555 53 67899999999999999999987
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC--CCccChHHHHhhccCCceEEEEecccCccccccc---H
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l 155 (2602)
++||+|+++.|+|+++...++.. |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++| +
T Consensus 113 ---~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l 186 (385)
T 1b5p_A 113 ---DPGDEVIVLSPYWVSYPEMVRFA---GGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVL 186 (385)
T ss_dssp ---CTTCEEEEEESCCTHHHHHHHHT---TCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred ---CCCCEEEEcCCCchhHHHHHHHc---CCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHH
Confidence 79999999999999887766544 99999999874 5679999999999999999999999999999988 7
Q ss_pred HHHHHHHHhcCCEEEEecccccccc---cccCCCC--CccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCcc
Q psy15216 156 LEIGELCRSKGVIFHCDAAQAVGKI---DINIQNY--KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHE 228 (2602)
Q Consensus 156 ~~I~~la~~~g~~livD~a~a~g~~---~~dl~~~--~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~ 228 (2602)
++|+++|++||+++|+|++|+.... ...+..+ +.++++.|+||.+|++| +||+++++++++.+.+....
T Consensus 187 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~---- 262 (385)
T 1b5p_A 187 EALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQ---- 262 (385)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhh----
Confidence 8899999999999999999875432 1122222 55789999999999888 89999988776666543311
Q ss_pred ccccccCcchhHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc--ccCh
Q psy15216 229 YGLRSGTLATHQIVGMGEAFRL---ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--FIEG 303 (2602)
Q Consensus 229 ~~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~--~~~~ 303 (2602)
...+++.....++.++|+. ...++++.++++.++++++.+.|.+ + |+.+..+... ...++.++ +.+.
T Consensus 263 ---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~---~~~~~~~~~~~~~~ 334 (385)
T 1b5p_A 263 ---STTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTA-L-GLKAVRPSGA---FYVLMDTSPIAPDE 334 (385)
T ss_dssp ---TTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-TCCBCCCSBT---TEEEEECTTTCSSH
T ss_pred ---ccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCCee---EEEEEecCCCCCCH
Confidence 1224555556666667753 3456788889999999999999987 4 7666544321 22333343 2456
Q ss_pred hHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 304 ESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 304 ~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++...| +||.+++|..|.. .+++|||++ ++++++++++++|++.
T Consensus 335 ~~l~~~l~~~gv~v~~g~~f~~-------------------~~~iRis~~--~~~~~i~~~l~~l~~~ 381 (385)
T 1b5p_A 335 VRAAERLLEAGVAVVPGTDFAA-------------------FGHVRLSYA--TSEENLRKALERFARV 381 (385)
T ss_dssp HHHHHHHHHTTEECEESGGGTC-------------------TTEEEEECC--SCHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHCCeEEecccccCC-------------------CCeEEEEec--CCHHHHHHHHHHHHHH
Confidence 6777776 7999999887632 278999998 7899999999999853
No 104
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.92 E-value=3.5e-24 Score=276.75 Aligned_cols=312 Identities=15% Similarity=0.108 Sum_probs=244.7
Q ss_pred eeeccC--CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q psy15216 1395 NIVFKD--ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIK 1472 (2602)
Q Consensus 1395 ~v~L~~--~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~ 1472 (2602)
.++++. +..+.++.+++++.+.++...++|+.. ..++|+++++++|+++++|++|+|+|+|++.++.
T Consensus 32 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~-----------~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~ 100 (365)
T 3get_A 32 VIKLASNENPFGTPPKAIECLRQNANKAHLYPDDS-----------MIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIH 100 (365)
T ss_dssp CEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTT-----------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHH
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCC-----------hHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 345542 334678999999999987655665541 1478999999999988999999999999999999
Q ss_pred hhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEecc-CCCCCcChhHHHhhccCCceEEEEeccccccccccCh
Q psy15216 1473 GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP-KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI 1551 (2602)
Q Consensus 1473 ~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~-~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l 1551 (2602)
++. ++||+|+++.++|+++...+... |++++.++. +.++ +|++++++++++++++|++++|+||||.++|+
T Consensus 101 ~l~----~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~ 172 (365)
T 3get_A 101 SKL----NSKNAFLQAGVTFAMYEIYAKQC---GAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDA 172 (365)
T ss_dssp HHC----CTTCEEEECSSCCTHHHHHHHHH---TCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCH
T ss_pred HHh----CCCCEEEEeCCChHHHHHHHHHc---CCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCH
Confidence 986 89999999999999988777766 999999998 6678 99999999999999999999999999999999
Q ss_pred HHHHHHhh--hcCCEEEEeccccc------CcccccC----CCCCccEEEEccccccCCCc--eEEEEEecCCCCccccc
Q psy15216 1552 LEIGELCR--SKGVIFHCDAAQAV------GKIDINI----QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQ 1617 (2602)
Q Consensus 1552 ~~I~~ia~--~~gi~vivD~a~~~------g~~~~~l----~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~ 1617 (2602)
++|.++++ ++|+++|+|++|+. +..+.+. ...+.++++.|+||.+|++| +|++++++++++.+...
T Consensus 173 ~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 252 (365)
T 3get_A 173 SEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKL 252 (365)
T ss_dssp HHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHh
Confidence 88888887 67999999999973 2222221 12345788999999888666 79999987766655443
Q ss_pred cccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecC
Q psy15216 1618 IHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI 1697 (2602)
Q Consensus 1618 ~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~ 1697 (2602)
. ...+++...+.++.++|+.. .++++.++++.++++++.+.|.+ . ++.+..+. .....+.++..
T Consensus 253 ~---------~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~-~-g~~~~~~~----~~~~~~~~~~~ 316 (365)
T 3get_A 253 R---------APFNVSNLALKAAVAAMDDD-EFTEKTLENNFSQMELYKEFAKK-H-NIKIIDSY----TNFITYFFDEK 316 (365)
T ss_dssp S---------CTTCSCHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHHHHHHHHH-T-TCEECCCS----SSEEEEECSSS
T ss_pred c---------CCCCcCHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHh-C-CCEECCCC----CeEEEEECCCC
Confidence 2 12346777777777777732 55788889999999999999988 4 77765332 12333444433
Q ss_pred CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1698 EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1698 ~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
+..++...| +||.+++|..|. . +++|++++ +.+|+++++++|++
T Consensus 317 ~~~~~~~~l~~~gi~v~~g~~~~-~-------------------~~iRis~~---~~~~i~~l~~~l~~ 362 (365)
T 3get_A 317 NSTDLSEKLLKKGIIIRNLKSYG-L-------------------NAIRITIG---TSYENEKFFTEFDK 362 (365)
T ss_dssp CHHHHHHHHHTTTEECEECGGGT-C-------------------SEEEEECC---CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEEECccCC-C-------------------CEEEEEcC---CHHHHHHHHHHHHH
Confidence 566676666 799999988764 2 79999987 89999999999986
No 105
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.92 E-value=5.6e-24 Score=276.08 Aligned_cols=338 Identities=12% Similarity=0.093 Sum_probs=239.6
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccC
Q psy15216 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (2602)
Q Consensus 6 ~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~ 85 (2602)
.+++|+.+++++.+.+...+.+|+ +..+++++.+++++|++ ++++++|+|+|+++++.++.. .+++
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~-----------~~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~~~~-~~~~ 73 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNSKQLTQG-----------KRSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSE-FSAD 73 (375)
T ss_dssp CCCCCHHHHHHHHHHHTSSCCSSS-----------HHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSC-CCTT
T ss_pred CCCCCHHHHHHHHHHHHcCcccCC-----------hHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhcc-cCCC
Confidence 468899999999998865332321 25788999999999986 899999999999999999820 0279
Q ss_pred CCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhc
Q psy15216 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK 165 (2602)
Q Consensus 86 gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~ 165 (2602)
||+|+++.++|+++...+... |++++.+++++++.+|+++|++++++++++|+++++ ||.+.|+++|.++|++|
T Consensus 74 gd~Vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~~l~~~~ 147 (375)
T 2fnu_A 74 RNEIITTPISFVATANMLLES---GYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCKKH 147 (375)
T ss_dssp SCEEEECSSSCTHHHHHHHHT---TCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHHHH
T ss_pred CCEEEECCCccHhHHHHHHHC---CCEEEEeccCCCCCCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHHHHHHHc
Confidence 999999999999998877654 999999999887789999999999999999988887 99999999999999999
Q ss_pred CCEEEEeccccccccccc--CCCCCccEEEeccc--cccCCCCcEEEEEe--cCCCCcccceecCCCc---cccccccCc
Q psy15216 166 GVIFHCDAAQAVGKIDIN--IQNYKVDLMSFSAH--KIYGPKGIGALYIR--RNPRTRIEAQIHGGGH---EYGLRSGTL 236 (2602)
Q Consensus 166 g~~livD~a~a~g~~~~d--l~~~~~D~~~~S~~--K~~Gp~G~G~l~~~--~~~~~~l~~~~~g~~~---~~~~~~gt~ 236 (2602)
|+++|+|++|+.+..+.. +..++ |++++|++ |++|+ |+|+++++ +++++.+.+...++.. ++.+..+++
T Consensus 148 ~~~li~D~a~~~~~~~~~~~~~~~~-~i~~~s~s~~K~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (375)
T 2fnu_A 148 SLSFLSDSSHALGSEYQNKKVGGFA-LASVFSFHAIKPITT-AEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSI 225 (375)
T ss_dssp TCEEEEECTTCTTCEETTEETTSSS-SEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSC
T ss_pred CCEEEEECccccCCeECCeeccccC-CeEEEeCCCCCCccc-cCceEEEeCCHHHHHHHHHHHhcCCccccccccccccc
Confidence 999999999998865432 33333 56655555 98888 89999885 4455556554332221 111211111
Q ss_pred chh-HHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCC--CCCCCceEEEEEcc--c-ChhHHHHH
Q psy15216 237 ATH-QIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDM--NNRIPHNLNISFNF--I-EGESLLMA 309 (2602)
Q Consensus 237 ~~~-~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~--~~~~~~~~~~~~~~--~-~~~~~~~~ 309 (2602)
+.. ....+.+++.+ ...++++..++..++++++.+.|.+ ++++++..++ ....+..+.+.++. . +..++.+.
T Consensus 226 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (375)
T 2fnu_A 226 GHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKD-NPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILES 304 (375)
T ss_dssp CCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTT-CSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHH
Confidence 111 11111122221 2346788889999999999999988 7888887652 12233445566654 2 56677777
Q ss_pred h--CCeEEcccccCCCCCCChHHHHHHcC---C--CccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 310 I--KDIAVSSGSACTSASLEPSYVLRALG---C--NDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 310 L--~gI~v~~g~~~~~~~~~~~~~~~~~g---~--~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
| +||.++. .|.+.+..+.+.. .+. . .+....+++||+++.++|++|+++++++|++.
T Consensus 305 L~~~gi~v~~--~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 368 (375)
T 2fnu_A 305 LHKRGILAQV--HYKPIYQYQLYQQ-LFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKT 368 (375)
T ss_dssp HHHTTEECBC--CCCCGGGSHHHHH-HHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHCCCCccc--cccccccchhhhc-CCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 7 7999883 3433222222210 000 1 00112368999999999999999999999864
No 106
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.92 E-value=2.3e-23 Score=278.67 Aligned_cols=337 Identities=15% Similarity=0.069 Sum_probs=250.5
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC--CCcE---EEeCCHHHHHHHHHHhccc
Q psy15216 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PREI---IWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 6 ~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~--~~~I---v~t~g~T~al~~~~~~l~~ 80 (2602)
++++++.+.+++.+++...+.+++. ......+.+++++++++++|++ ++++ ++|+|+|+|+.+++.++..
T Consensus 65 t~~~~~~v~~~l~~~~~~~~~~~~~-----~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~ 139 (502)
T 3hbx_A 65 TTWMEPECDKLIMSSINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKR 139 (502)
T ss_dssp CCCCCHHHHHHHHHTTTCBTTCTTT-----CHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhccCCCChhc-----ChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHH
Confidence 4678899999998887654444432 2335667788999999999997 5543 4699999999999988762
Q ss_pred ccc----cCCC-----EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC-CccChHHHHhhccCCceEEEEecccCccc
Q psy15216 81 FYK----KRGK-----HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIG 150 (2602)
Q Consensus 81 ~~~----~~gd-----~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~ld~e~l~~~i~~~tklv~i~~~~npTG 150 (2602)
... .+|+ +|+++.++|+++...+..+ |++++.++++++ +.+|+++|+++++++|++|++++++||||
T Consensus 140 ~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~---G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG 216 (502)
T 3hbx_A 140 KWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYF---EVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNG 216 (502)
T ss_dssp HHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHT---TCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTC
T ss_pred HHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHc---CceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCC
Confidence 110 1266 9999999999988777665 999999998775 88999999999999999999999999999
Q ss_pred ccccHHHHHHHHHhc------CCEEEEeccccccc-------ccccCCCCCccEEEecccccc-CCCCcEEEEEecC-CC
Q psy15216 151 VIQPILEIGELCRSK------GVIFHCDAAQAVGK-------IDINIQNYKVDLMSFSAHKIY-GPKGIGALYIRRN-PR 215 (2602)
Q Consensus 151 ~~~~l~~I~~la~~~------g~~livD~a~a~g~-------~~~dl~~~~~D~~~~S~~K~~-Gp~G~G~l~~~~~-~~ 215 (2602)
.+.|+++|.++|+++ |+++|+|+||+.+. .+.++...++|++.+|+||++ +|.|+|++++++. .+
T Consensus 217 ~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l 296 (502)
T 3hbx_A 217 EFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDL 296 (502)
T ss_dssp CBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGS
T ss_pred cccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEEEEeCHHHh
Confidence 999999999999999 99999999998443 233444457899999999954 8999999988753 33
Q ss_pred Ccc---cceecCCCccccccccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCC
Q psy15216 216 TRI---EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIP 291 (2602)
Q Consensus 216 ~~l---~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~ 291 (2602)
... .+.+.++........++.+...++++.+++.. ..+++.++.++..++++++.+.|.+ .++++++.+.. ..
T Consensus 297 ~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~--~~ 373 (502)
T 3hbx_A 297 PEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEK-TERFNIVSKDE--GV 373 (502)
T ss_dssp CGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCEEECSCSS--SS
T ss_pred hHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCC--Cc
Confidence 221 22222222211112345555566777777774 3567889999999999999999988 67899886511 12
Q ss_pred ceEEEEEcc---cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q psy15216 292 HNLNISFNF---IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLL 366 (2602)
Q Consensus 292 ~~~~~~~~~---~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L 366 (2602)
+++.|.++. .+..++.+.| +||.++....... . ....++||+++.++|.+|++++++.|
T Consensus 374 ~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~-------------~---~~~~~lRisv~~~~t~edid~li~~L 437 (502)
T 3hbx_A 374 PLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPN-------------A---QHITVLRVVIREDFSRTLAERLVIDI 437 (502)
T ss_dssp SEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTT-------------C---TTCEEEEEECCTTCCHHHHHHHHHHH
T ss_pred eEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcc-------------c---CCceEEEEEeCCCCCHHHHHHHHHHH
Confidence 455666654 2345777777 6888753221110 0 11268999999999999999999999
Q ss_pred Hhh
Q psy15216 367 KMK 369 (2602)
Q Consensus 367 ~~~ 369 (2602)
++.
T Consensus 438 ~~~ 440 (502)
T 3hbx_A 438 EKV 440 (502)
T ss_dssp HHH
T ss_pred HHH
Confidence 964
No 107
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.92 E-value=1.9e-23 Score=277.38 Aligned_cols=336 Identities=13% Similarity=-0.007 Sum_probs=246.4
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCc-----EEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE-----IIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~-----iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
+.++.+.+++.+.+.....++. .++...++..++++++++++|+++++ +++|+|+|+|+.+++.++....
T Consensus 53 ~~~~~v~e~~~~a~~~~~~~~~-----~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~ 127 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNWIDKE-----EYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRW 127 (452)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTT-----TCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCCCChh-----hChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHH
Confidence 4456788888877754333332 23456678899999999999997765 9999999999999998876211
Q ss_pred c----cCC-----CEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHhhccCCceEEEEeccccccccc
Q psy15216 1479 K----KRG-----KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVI 1548 (2602)
Q Consensus 1479 ~----~~g-----d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~ 1548 (2602)
. .+| ++|++++ .|+++...+..+ |++++.+++++ ++.+|+++|+++|+++|++|++++++||||.+
T Consensus 128 ~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~---G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~ 203 (452)
T 2dgk_A 128 RKRMEAAGKPTDKPNLVCGP-VQICWHKFARYW---DVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNY 203 (452)
T ss_dssp HHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHT---TCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBB
T ss_pred HHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHc---CceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCccc
Confidence 1 144 6999999 999988777665 99999999887 78999999999999999999999999999999
Q ss_pred cChHHHHHHhhhc------CCEEEEecccccCcc-------cccCCCCCccEEEEcccc-ccCCCceEEEEEecC-CC-C
Q psy15216 1549 QPILEIGELCRSK------GVIFHCDAAQAVGKI-------DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRN-PR-T 1612 (2602)
Q Consensus 1549 ~~l~~I~~ia~~~------gi~vivD~a~~~g~~-------~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~-~~-~ 1612 (2602)
.|+++|.++|++| |+|+|+|+||+.+.. +.++...++|++++|+|| +++|.|+|+++++++ .+ +
T Consensus 204 ~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~ 283 (452)
T 2dgk_A 204 EFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQ 283 (452)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCG
T ss_pred CCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHH
Confidence 9999999999995 999999999987643 233333478999999999 457888999999754 33 3
Q ss_pred cc--ccccccCCccccCCCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCC-CCCc
Q psy15216 1613 RI--EAQIHGGGHEYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN-RIPH 1688 (2602)
Q Consensus 1613 ~l--~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~-~~~~ 1688 (2602)
.+ .+.+.++........++.+.....++.+++. +...+++++.++..++++++.+.|.+ .+++.+..+... ...+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~~~~~~~ 362 (452)
T 2dgk_A 284 ELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAK-LGPYEFICTGRPDEGIP 362 (452)
T ss_dssp GGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSSEEEEEECCTTTBSS
T ss_pred HhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEecCCCCCCCeE
Confidence 32 2222222211111234555555666667776 34567889999999999999999988 778888743210 1234
Q ss_pred eEEEEEecC-----CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHH
Q psy15216 1689 NLNISFNFI-----EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKL 1761 (2602)
Q Consensus 1689 ~~~~~~~~~-----~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~ 1761 (2602)
...|.++.. +..++...| +||.++.... +.. + ...+++|++++.++|.+|++++++.
T Consensus 363 ~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~--~~~---------~-----~~~~~lRis~~~~~t~e~id~li~~ 426 (452)
T 2dgk_A 363 AVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTL--GGE---------A-----TDIVVMRIMCRRGFEMDFAELLLED 426 (452)
T ss_dssp EEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEEC--STT---------C-----TTCEEEEEECCTTCCHHHHHHHHHH
T ss_pred EEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeC--Ccc---------c-----CCeEEEEEEecCCCCHHHHHHHHHH
Confidence 555666532 236677666 6876653211 110 0 0136899999999999999999999
Q ss_pred HHHh
Q psy15216 1762 LKMK 1765 (2602)
Q Consensus 1762 L~~~ 1765 (2602)
|++.
T Consensus 427 l~~~ 430 (452)
T 2dgk_A 427 YKAS 430 (452)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9873
No 108
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.92 E-value=3e-24 Score=279.55 Aligned_cols=319 Identities=13% Similarity=0.117 Sum_probs=244.4
Q ss_pred CCCHHHHHHHHHHHhh-hcCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhccccccc
Q psy15216 8 PIDPRVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFYKK 84 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~-~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g--~~~~~Iv~t~g~T~al~~~~~~l~~~~~~ 84 (2602)
++|+.+.+++.+.+.. .+.++.. ..+..+++++++++.+| +++++|++|+|+|+|+++++.++. +
T Consensus 37 ~~~~~v~~a~~~~~~~~~~~y~~~--------~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~----~ 104 (383)
T 3kax_A 37 EVPQPIQTALKKRIEHPIFGYTLP--------PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFT----K 104 (383)
T ss_dssp CCCHHHHHHHHHHHHSCCCCCCCC--------CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHC----C
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCC--------CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhC----C
Confidence 6789999999998865 2222221 23467888899999998 677899999999999999999987 8
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC---CccChHHHHhhccCCceEEEEecccCcccccccHH---HH
Q psy15216 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN---GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPIL---EI 158 (2602)
Q Consensus 85 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~---~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~---~I 158 (2602)
+||+|+++.+.|+++...+... |++++.++.++. +.+|+++|++++++++++|++++|+||||.++|.+ +|
T Consensus 105 ~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l 181 (383)
T 3kax_A 105 ENESVLVQPPIYPPFFEMVTTN---NRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTKL 181 (383)
T ss_dssp TTCEEEECSSCCHHHHHHHHHT---TCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHHH
T ss_pred CCCEEEEcCCCcHHHHHHHHHc---CCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHHH
Confidence 9999999999999987666554 999999998643 34899999999988999999999999999999854 56
Q ss_pred HHHHHhcCCEEEEecccccccc----cccCCCC-----CccEEEeccccccCCCC--cEEEEE-ecCCCCcccceecCCC
Q psy15216 159 GELCRSKGVIFHCDAAQAVGKI----DINIQNY-----KVDLMSFSAHKIYGPKG--IGALYI-RRNPRTRIEAQIHGGG 226 (2602)
Q Consensus 159 ~~la~~~g~~livD~a~a~g~~----~~dl~~~-----~~D~~~~S~~K~~Gp~G--~G~l~~-~~~~~~~l~~~~~g~~ 226 (2602)
.++|++||+++|+|++|+.... +..+..+ +.++++.|+||.+|++| +|++++ ++++.+.+.+....
T Consensus 182 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-- 259 (383)
T 3kax_A 182 GSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYR-- 259 (383)
T ss_dssp HHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHH--
T ss_pred HHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhh--
Confidence 6669999999999999975321 2222222 34588999999888776 799988 45565555443211
Q ss_pred ccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--cChh
Q psy15216 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGE 304 (2602)
Q Consensus 227 ~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~--~~~~ 304 (2602)
+..++++.....++.++++....++++..++++++++++.+.|.+.+|++.+..+... ...++.++. .+..
T Consensus 260 ----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 332 (383)
T 3kax_A 260 ----QGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGS---FLLWIDCSALNLSQD 332 (383)
T ss_dssp ----TTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBS---SEEEEECGGGCCCHH
T ss_pred ----cccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCce---EEEEEEccccCCCHH
Confidence 1234677788777777777544567888899999999999999875678888755432 233455553 4667
Q ss_pred HHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 305 SLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 305 ~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++...| +||.+++|..|... ..+++|++++ ++++++++++++|++.
T Consensus 333 ~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRi~~~--~~~~~i~~~l~~l~~~ 381 (383)
T 3kax_A 333 ERTKLLEEKGKIIVEPGEKYGLG-----------------GEEHIGINIG--CPRSVLEEILNRLRHT 381 (383)
T ss_dssp HHHHHHHHTSCEECEESGGGCTT-----------------CTTEEEEECS--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCEEeECchhhcCC-----------------CCCeEEEEEc--CCHHHHHHHHHHHHHH
Confidence 777766 59999999887642 1389999998 5899999999999863
No 109
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.92 E-value=7.2e-24 Score=274.08 Aligned_cols=318 Identities=11% Similarity=0.095 Sum_probs=246.3
Q ss_pred eceeeeccCC--CCCCCHHHHHHHHHHHhh--ccCCCCCccchhHHHHHHHHHHHHHHHHHHhCC-CCCcEEEeCCHHHH
Q psy15216 1392 PYTNIVFKDA--TTPIDPRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATES 1466 (2602)
Q Consensus 1392 P~~~v~L~~~--~~~~~~~v~eal~~~l~~--~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~-~~~~iv~t~gaT~a 1466 (2602)
|...+.++.+ ..+.++.+.+++.+.+.. ...++.. ...++|+++++++|+ ++++|++|+|+|+|
T Consensus 29 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-----------~~~~l~~~la~~~g~~~~~~i~~~~g~t~a 97 (367)
T 3euc_A 29 SHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVP-----------SSEALRAKLKEVMQVPAGMEVLLGNGSDEI 97 (367)
T ss_dssp CTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCC-----------CHHHHHHHHHHHHTCCTTCEEEEEEHHHHH
T ss_pred CCCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC-----------cHHHHHHHHHHHhCCCCcceEEEcCCHHHH
Confidence 3455666533 346788999999998874 3333332 257899999999999 77899999999999
Q ss_pred HHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEecccccc
Q psy15216 1467 NNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEI 1545 (2602)
Q Consensus 1467 l~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~t 1545 (2602)
++.++.++. ++||+|+++.++|+++...+.. .|++++.++.++++.+|+++|++++++ +|++|++++|+|||
T Consensus 98 ~~~~~~~~~----~~gd~Vl~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 170 (367)
T 3euc_A 98 ISMLALAAA----RPGAKVMAPVPGFVMYAMSAQF---AGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPT 170 (367)
T ss_dssp HHHHHHHTC----CTTCEEEEEESCSCCSCHHHHT---TTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTT
T ss_pred HHHHHHHHc----CCCCEEEEcCCCHHHHHHHHHH---cCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCC
Confidence 999999986 8999999999999998776554 499999999998889999999999998 99999999999999
Q ss_pred ccccC---hHHHHHHhhhc--CCEEEEecccccCc---ccccCCCCCccEEEEccccccCCCc--eEEEEEecCCCCccc
Q psy15216 1546 GVIQP---ILEIGELCRSK--GVIFHCDAAQAVGK---IDINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIE 1615 (2602)
Q Consensus 1546 G~~~~---l~~I~~ia~~~--gi~vivD~a~~~g~---~~~~l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~ 1615 (2602)
|.++| +++|.++|++| |+++|+|++|+... ....+...+.++++.|+||. +++| +||+++++++++.+.
T Consensus 171 G~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~ 249 (367)
T 3euc_A 171 GNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLD 249 (367)
T ss_dssp CCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHG
T ss_pred CCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHH
Confidence 99987 67788889999 99999999987321 11122334566889999998 6666 799999877665554
Q ss_pred cccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe
Q psy15216 1616 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN 1695 (2602)
Q Consensus 1616 ~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~ 1695 (2602)
... ..++.+...+.++.++|+. ..++++..+++.++++++.+.|.+ ++++.+..+ . .....+.++
T Consensus 250 ~~~---------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~-~---~~~~~~~~~ 314 (367)
T 3euc_A 250 KVR---------PPYNVNVLTEATALFALEH-VAVLDEQAAQLRAERSRVAEGMAA-HGGVTVFPS-A---ANFLLARVP 314 (367)
T ss_dssp GGC---------CSSCCCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHT-STTCEECCC-S---SSEEEEECS
T ss_pred HhC---------CCCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHh-CCCcEECCC-C---CeEEEEECC
Confidence 332 1335677777777777775 455788889999999999999987 678875432 1 223334443
Q ss_pred cCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1696 FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1696 ~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+..++...| +||.++++..|... ..+++|+|++ |.+|+++++++|++.
T Consensus 315 --~~~~l~~~l~~~gi~v~~~~~~~~~-----------------~~~~iRis~~---~~~~i~~~~~~l~~~ 364 (367)
T 3euc_A 315 --DAAQTFDRLLARKVLIKNVSKMHPL-----------------LANCLRVTVS---TPEENAQFLEAFAAS 364 (367)
T ss_dssp --CHHHHHHHHHTTTEECEECGGGCGG-----------------GTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHCCeEEEECCccCCC-----------------CCCEEEEecC---CHHHHHHHHHHHHHH
Confidence 566676666 79999988876431 2389999987 899999999999873
No 110
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.92 E-value=7.1e-24 Score=273.27 Aligned_cols=302 Identities=20% Similarity=0.167 Sum_probs=235.6
Q ss_pred CCCHHHHHHHHHHHhh----hcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccc
Q psy15216 8 PIDPRVVDKMIPYLRV----QFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK 83 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~----~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~ 83 (2602)
++|+.+.+++.+.+.. .+.+|.. ...++|+++++++|+++++|++|+|+++|+++++.++.
T Consensus 39 ~~~~~v~~a~~~~~~~~~~~~~~y~~~-----------~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~---- 103 (360)
T 3hdo_A 39 PPSPEVVKAILEELGPDGAALRIYPSA-----------SSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFA---- 103 (360)
T ss_dssp CCCHHHHHHHHHHHTTTCGGGGSCCCS-----------SCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHHhcccchhhcCCCC-----------chHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHh----
Confidence 6789999999998875 3444432 13678999999999988999999999999999999987
Q ss_pred cCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHH
Q psy15216 84 KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCR 163 (2602)
Q Consensus 84 ~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~ 163 (2602)
++||+|+++.+.|+++...+... |++++.++.++++.+ +++++.+ +++++++++|+||||.++|+++|.++|+
T Consensus 104 ~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~~~~~l~~l~~ 176 (360)
T 3hdo_A 104 AEGEEIGYVHPSYSYYGTLAEVQ---GARVRTFGLTGDFRI--AGFPERY--EGKVFFLTTPNAPLGPSFPLEYIDELAR 176 (360)
T ss_dssp CTTCEEEEESSSCTHHHHHHHHH---TCEEEEECBCTTSSB--TTCCSSB--CSSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred CCCCEEEEcCCChHHHHHHHHHC---CCEEEEeeCCCCCCH--HHHHhhc--CCCEEEEeCCCCCCCCCcCHHHHHHHHH
Confidence 89999999999999988777666 999999998776655 5555544 3679999999999999999999999999
Q ss_pred hcCCEEEEeccccccc--ccccC-CCCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccccccccCcch
Q psy15216 164 SKGVIFHCDAAQAVGK--IDINI-QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238 (2602)
Q Consensus 164 ~~g~~livD~a~a~g~--~~~dl-~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~ 238 (2602)
++|+++|+|++|+... ....+ ...+.++++.|+||.+|++| +||+++++++++.+.... ..++++.
T Consensus 177 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~---------~~~~~~~ 247 (360)
T 3hdo_A 177 RCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIR---------DHYNLDR 247 (360)
T ss_dssp HBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHS---------CSCCSCH
T ss_pred HCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhC---------CCCCCCH
Confidence 9999999999997421 11111 12345688899999888776 799999887766665433 1246777
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEc
Q psy15216 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVS 316 (2602)
Q Consensus 239 ~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~ 316 (2602)
....++.++|+. ..++++..+++.++++++.+.|.+ . ++.+..+. ...+.+.++..+..++...| +||.++
T Consensus 248 ~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~gi~v~ 320 (360)
T 3hdo_A 248 LAQAACVAALRD-QAYLSECCRRIRETREWFTTELRS-I-GYDVIPSQ----GNYLFATPPDRDGKRVYDGLYARKVLVR 320 (360)
T ss_dssp HHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHH-T-TCEECCCS----SSEEEEECTTCCHHHHHHHHHHTTEECB
T ss_pred HHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCEEcCCC----ccEEEEECCCCCHHHHHHHHHHCCEEEE
Confidence 777777788874 445788899999999999999987 4 77765332 23344555555677777777 799998
Q ss_pred ccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 317 SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++.... ..+++||+++ +.+|+++++++|++.
T Consensus 321 ~~~~~~-------------------~~~~iRis~~---~~~e~~~l~~al~~~ 351 (360)
T 3hdo_A 321 HFSDPL-------------------LAHGMRISIG---TREEMEQTLAALKEI 351 (360)
T ss_dssp CCCSTT-------------------TTTSEEEECC---CHHHHHHHHHHHHHH
T ss_pred ECCCCC-------------------CCCEEEEEcC---CHHHHHHHHHHHHHH
Confidence 765411 1378999998 899999999999963
No 111
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.92 E-value=6.4e-24 Score=273.14 Aligned_cols=314 Identities=14% Similarity=0.093 Sum_probs=241.5
Q ss_pred eeeeccC--CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q psy15216 1394 TNIVFKD--ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAI 1471 (2602)
Q Consensus 1394 ~~v~L~~--~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al 1471 (2602)
..+.++. ...+.++.+.+++.+.+.....+|. ....++|+++++++|+++++|++|+|+|+|++.++
T Consensus 17 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~-----------~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~ 85 (354)
T 3ly1_A 17 NPIRINFNENPLGMSPKAQAAARDAVVKANRYAK-----------NEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAI 85 (354)
T ss_dssp SCEECSSCCCSSCCCHHHHHHHHHTGGGTTSCCH-----------HHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHH
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHhhCcCCCC-----------CchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHH
Confidence 3455542 3346788999999988875333332 24678999999999998899999999999999999
Q ss_pred HhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhcc--CCceEEEEecccccccccc
Q psy15216 1472 KGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC--SDTILVSVMLVNNEIGVIQ 1549 (2602)
Q Consensus 1472 ~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~--~~t~lv~l~~~~n~tG~~~ 1549 (2602)
.++. ++||+|+++.++|+++...++.. |++++.++.++++.+|+++|+++++ +++++|++++|+||||.++
T Consensus 86 ~~l~----~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~ 158 (354)
T 3ly1_A 86 EAYA----SLEAQLVIPELTYGDGEHFAKIA---GMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTIT 158 (354)
T ss_dssp HHHC----CTTCEEEEESSSCTHHHHHHHHT---TCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCC
T ss_pred HHHh----CCCCeEEECCCCchHHHHHHHHc---CCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCc
Confidence 9986 89999999999999987666554 9999999998888899999999998 8999999999999999999
Q ss_pred ChHHHHHHhhh--cCCEEEEecccccCcccc---c----CCCC-CccEEEEccccccCCCc--eEEEEEecCCCCccccc
Q psy15216 1550 PILEIGELCRS--KGVIFHCDAAQAVGKIDI---N----IQNY-KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQ 1617 (2602)
Q Consensus 1550 ~l~~I~~ia~~--~gi~vivD~a~~~g~~~~---~----l~~~-~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~ 1617 (2602)
|+++|.++++. ||+++|+|++|+.....- . +... +.++++.|+||.+|++| +|++++++++++.+...
T Consensus 159 ~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~ 238 (354)
T 3ly1_A 159 PADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRY 238 (354)
T ss_dssp CHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGG
T ss_pred CHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHh
Confidence 98888888877 999999999987433211 1 1222 55689999999888766 79999987766655543
Q ss_pred cccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecC
Q psy15216 1618 IHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI 1697 (2602)
Q Consensus 1618 ~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~ 1697 (2602)
. ..++++...+.++.++|+.. ..+++.++++.++++++.+.|.+ . ++.+..+ . .....+.++.
T Consensus 239 ~---------~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~-~-~~~~~~~-~---~~~~~~~~~~- 301 (354)
T 3ly1_A 239 V---------AGEKINFSGVDAALASMNDS-AFITYSKKSNDVSRQILLKALED-L-KLPYLPS-E---GNFVFHQLVV- 301 (354)
T ss_dssp T---------TCSCCCHHHHHHHHHHTTCH-HHHHHHHHHHHHHHHHHHHHHHH-H-TCCBCCC-C---SSEEEEECSS-
T ss_pred c---------CCCCCCHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHH-C-CCeECCC-C---ceEEEEECCC-
Confidence 2 12467777777777777733 55788889999999999999987 2 5544422 1 2233333333
Q ss_pred CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1698 EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1698 ~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+..++...| +||.++ |..+.. .+++||+++ +.+|+++++++|++.
T Consensus 302 ~~~~~~~~l~~~gi~v~-g~~~~~-------------------~~~iRis~~---~~~~i~~~~~~l~~~ 348 (354)
T 3ly1_A 302 PLKDYQTHMADAGVLIG-RAFPPA-------------------DNWCRISLG---TPQEMQWVADTMREF 348 (354)
T ss_dssp CHHHHHHHHHHTTEECC-CCCTTC-------------------TTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEe-ecCCCC-------------------CCEEEEEcC---CHHHHHHHHHHHHHH
Confidence 556666666 899988 654432 289999987 889999999999973
No 112
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.92 E-value=7.5e-25 Score=291.82 Aligned_cols=332 Identities=17% Similarity=0.184 Sum_probs=248.4
Q ss_pred CCCCCHHHHHHHHHHHhhcc--CCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCc----EEEeCCHHHHHHHHHHhhh
Q psy15216 1402 TTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE----IIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~~~--~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~----iv~t~gaT~al~~al~~l~ 1475 (2602)
..+.++.+++++.+.+.+.+ ++|+++.|..+....++.+.+++++++++|+++++ |++++|+ +++..++.++.
T Consensus 53 e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all 131 (483)
T 1rv3_A 53 ENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTALV 131 (483)
T ss_dssp CCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHhc
Confidence 34678899999999988765 67876556555666778889999999999998654 6666666 88888788876
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHH-----HhCC--cEEEEeccC-CCCCcChhHHHhhcc-CCceEEEEeccccccc
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKL-----ENDG--FRVTYLKPK-NNGLITLSQLEEKIC-SDTILVSVMLVNNEIG 1546 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~-----~~~G--~~v~~v~~~-~~~~id~d~l~~~i~-~~t~lv~l~~~~n~tG 1546 (2602)
+|||+|++++++|+++...+... ...| .+++.++++ .++.+|+++|+++++ ++|++|++ +++|++
T Consensus 132 ----~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~- 205 (483)
T 1rv3_A 132 ----EPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS- 205 (483)
T ss_dssp ----CTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-
T ss_pred ----CCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-
Confidence 89999999999999986533111 0013 455555556 468899999999998 89999999 999998
Q ss_pred cccChHHHHHHhhhcCCEEEEecccccCcccccCCCC---CccEEEEcccc-ccCCCceEEEEEecCCCCccccccccCC
Q psy15216 1547 VIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNY---KVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGG 1622 (2602)
Q Consensus 1547 ~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~---~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~~~~g~~ 1622 (2602)
.++|+++|.++|++||+++++|++|+.|....++... ++|++++|+|| +.||+| |+++++++... +. ...|+.
T Consensus 206 ~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l~Gprg-G~i~~~~~~~~-~~-~~~g~~ 282 (483)
T 1rv3_A 206 RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRA-GMIFYRRGVRS-VD-PKTGKE 282 (483)
T ss_dssp SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEEECSBCC---------C
T ss_pred CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccCCCCCc-eEEEEcchhhh-hc-cccCcc
Confidence 8999999999999999999999999987766555544 68999999999 679998 99999987442 21 000000
Q ss_pred ----c-------cccCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceE
Q psy15216 1623 ----H-------EYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNL 1690 (2602)
Q Consensus 1623 ----~-------~~~~~~gt~~~~~~~al~~aL~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~ 1690 (2602)
. ......|+++.+.+.++.+|+.... .+++.+.+++.++++++.+.|.+ . |+.+..+.. .....
T Consensus 283 ~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~--~~~~~ 358 (483)
T 1rv3_A 283 ILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE-L-GYKIVTGGS--DNHLI 358 (483)
T ss_dssp CBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEGGGSC--SSSEE
T ss_pred hhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh-c-CCEeccCCC--CCceE
Confidence 0 0112257888999999999998653 56788999999999999999988 4 888875422 12334
Q ss_pred EEEEec--CCcHHHHHhc--CCEEEc----cccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCC----HHHHHHH
Q psy15216 1691 NISFNF--IEGESLLMAI--KDIAVS----SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT----EKEIDFT 1758 (2602)
Q Consensus 1691 ~~~~~~--~~~~~~~~~L--~gI~v~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t----~edid~l 1758 (2602)
.+.+.. .+..++...| .||.++ +|..|.. ..+++|||++.++| ++|++++
T Consensus 359 ~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~------------------~~~~iRis~~~~~t~g~~~edi~~~ 420 (483)
T 1rv3_A 359 LVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSAL------------------RPSGLRLGTPALTSRGLLEKDFQKV 420 (483)
T ss_dssp EEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTT------------------SCCEEEEECHHHHHTTCCHHHHHHH
T ss_pred EEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCC------------------CCceEEeecCCcccCCCCHHHHHHH
Confidence 444432 3455565555 799988 6653321 13789999998777 9999999
Q ss_pred HHHHHHh
Q psy15216 1759 IKLLKMK 1765 (2602)
Q Consensus 1759 i~~L~~~ 1765 (2602)
+++|++.
T Consensus 421 ~~~l~~~ 427 (483)
T 1rv3_A 421 AHFIHRG 427 (483)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 113
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=1.3e-24 Score=281.59 Aligned_cols=318 Identities=14% Similarity=0.122 Sum_probs=242.0
Q ss_pred cCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHH
Q psy15216 25 FGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR 104 (2602)
Q Consensus 25 ~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~ 104 (2602)
++++.. +..+....+.++++++.+++++|++ +.++|++|+|+|+++++..+ .+||+|++++++|+++. +..
T Consensus 21 ~~~~~~--~h~~~~~~~~~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~~~-----~~gd~vi~~~~~~~~~~-~~~ 91 (379)
T 3ke3_A 21 YTDRAL--NHMSKAFQEVMNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVARQL-----TIDEDCLIIRNGWFSYR-WTQ 91 (379)
T ss_dssp CCTTSC--CTTSHHHHHHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHHHH-----CTTCEEEEEECSHHHHH-HHH
T ss_pred ccCCCC--CCCCHHHHHHHHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHHhC-----CCCCeEEEEeCCchhHH-HHH
Confidence 445543 3335667789999999999999987 68999999999999987554 48999999999998853 333
Q ss_pred HHHhCC--cEEEEeccCCC---------CccChHHHHhhcc-CCceEEEEecccCccccccc---HHHHHHHHHhcCCEE
Q psy15216 105 KLENDG--FRVTYLKPKNN---------GLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIF 169 (2602)
Q Consensus 105 ~~~~~G--~~v~~v~~~~~---------~~ld~e~l~~~i~-~~tklv~i~~~~npTG~~~~---l~~I~~la~~~g~~l 169 (2602)
.++..| .+++.++.+.. +.+|+++++++++ +++++|++++++|+||.+.| +++|.++||+||+++
T Consensus 92 ~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~l 171 (379)
T 3ke3_A 92 ILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLL 171 (379)
T ss_dssp HHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEE
Confidence 344445 57888876431 2589999999995 58999999999999999999 999999999999999
Q ss_pred EEecccccccccccCCCCCccEEEecccc-ccCCCCcEEEEEecCCCCcccceecCCCc-------------ccc--ccc
Q psy15216 170 HCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGH-------------EYG--LRS 233 (2602)
Q Consensus 170 ivD~a~a~g~~~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~-------------~~~--~~~ 233 (2602)
|+|++|+ |..++++..+++|++++|+|| +.||+|+|++++++++++.+.+....... +.+ ...
T Consensus 172 i~D~~~~-g~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 250 (379)
T 3ke3_A 172 VIDCIAS-GCVWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYH 250 (379)
T ss_dssp EEECTTC-TTCCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCS
T ss_pred EEEeccc-CCccccccccCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCC
Confidence 9999999 888888887889999999999 56788999999998876655442111100 001 113
Q ss_pred cCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--
Q psy15216 234 GTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI-- 310 (2602)
Q Consensus 234 gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L-- 310 (2602)
+|+++..++++.+|+++.. .+++++.++..++++++++.|.+ .|++++.++..+.+.+..+..+..+. .+...|
T Consensus 251 ~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~--~g~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~L~~ 327 (379)
T 3ke3_A 251 ATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTD--KGIESVAAEGFEAPGVVVSYTERDDM-HKGSAFAE 327 (379)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCBSBCTTCBCSSEEEEECSCHHH-HSSHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH--cCCEecCCccccCceEEEEccCCcch-HHHHHHHH
Confidence 5899999999999999654 45899999999999999999988 37777665544445444443332111 112333
Q ss_pred CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 311 KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 311 ~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+||.+++|.+|..+. ....+.+|||++.++|++||++++++|++.
T Consensus 328 ~Gi~v~~g~~~~~~~--------------~~~~~~lRis~~~~~t~~di~~~~~~l~~~ 372 (379)
T 3ke3_A 328 AGLQIAAGVPLKVGE--------------PDNFKTFRLGLFGLDKLTDIDGTVERFEKA 372 (379)
T ss_dssp TTCCCEECCCCSSCC--------------CTTCCEEEEECCSHHHHTCHHHHHHHHHHH
T ss_pred CCeEEeCCccccccc--------------cCcCCEEEEeCCcCCCHHHHHHHHHHHHHH
Confidence 799999887765320 011378999999999999999999999864
No 114
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.92 E-value=7.4e-24 Score=272.23 Aligned_cols=280 Identities=18% Similarity=0.176 Sum_probs=219.1
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCC-CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC
Q psy15216 43 IEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG-KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN 121 (2602)
Q Consensus 43 ~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~g-d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~ 121 (2602)
..++|+++|+++|+++++|++++|+++++++++.++. ++| |+|+++.|+|+++...+... |++++.++.+++
T Consensus 60 ~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~----~~g~d~Vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~ 132 (356)
T 1fg7_A 60 PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFC----EPGKDAILYCPPTYGMYSVSAETI---GVECRTVPTLDN 132 (356)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHC----CTTTCEEEECSSSCTHHHHHHHHH---TCEEEECCCCTT
T ss_pred HHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHh----CCCCCEEEEeCCChHHHHHHHHHc---CCEEEEeeCCCC
Confidence 4678999999999988999999999999999999987 789 99999999999988877766 999999998877
Q ss_pred CccChHHHHhhccCCceEEEEecccCcccccccHHHHHH---HHHhcCCEEEEeccccccccc---ccC-CCCCccEEEe
Q psy15216 122 GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE---LCRSKGVIFHCDAAQAVGKID---INI-QNYKVDLMSF 194 (2602)
Q Consensus 122 ~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~---la~~~g~~livD~a~a~g~~~---~dl-~~~~~D~~~~ 194 (2602)
+.+|+++++++++ ++++|++++|+||||.++|.++|.+ +|+ +|+++|+|++|+..... .++ ...+.++++.
T Consensus 133 ~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~ 210 (356)
T 1fg7_A 133 WQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILR 210 (356)
T ss_dssp SCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEE
T ss_pred CCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEe
Confidence 7899999999998 8999999999999999999666554 455 89999999999854311 222 3345678999
Q ss_pred ccccccCCCC--cEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHH
Q psy15216 195 SAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYN 271 (2602)
Q Consensus 195 S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~ 271 (2602)
|+||.+|++| +||+++++++++.+.+... .++++.....++.++|+... .++++..++++++++++.+
T Consensus 211 s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 281 (356)
T 1fg7_A 211 TLSKAFALAGLRCGFTLANEEVINLLMKVIA---------PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIA 281 (356)
T ss_dssp ESSSTTCCGGGCCEEEEECHHHHHHHHHHSC---------SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHhhcCchhhhEEEEeCHHHHHHHHHhcC---------CCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888 7999998877666654321 22566666666666765321 2377888899999999999
Q ss_pred HHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcc-cccCCCCCCChHHHHHHcCCCccCCCCeEEE
Q psy15216 272 GLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSS-GSACTSASLEPSYVLRALGCNDELAHSSIRF 348 (2602)
Q Consensus 272 ~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~-g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi 348 (2602)
.|.+ ++++....+.. ..++.+.++ +..++.+.| +||.+++ |..|.. .+++||
T Consensus 282 ~L~~-~~~~~~~~~~~---~~~~~~~~~--~~~~l~~~L~~~gI~v~~~g~~~~~-------------------~~~iRi 336 (356)
T 1fg7_A 282 ALKE-IPCVEQVFDSE---TNYILARFK--ASSAVFKSLWDQGIILRDQNKQPSL-------------------SGCLRI 336 (356)
T ss_dssp HHHH-STTEEEECCCS---SSEEEEEET--THHHHHHHHHHTTEECEECTTSTTC-------------------TTEEEE
T ss_pred HHHh-CCCceEECCCC---CeEEEEECC--CHHHHHHHHHHCCEEEEECCCCCCC-------------------CCeEEE
Confidence 9987 56543333322 234445554 566677666 7999998 765532 268999
Q ss_pred ecCCCCCHHHHHHHHHHHHh
Q psy15216 349 TIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 349 s~~~~~t~edid~li~~L~~ 368 (2602)
+++ +++|+++++++|++
T Consensus 337 s~~---~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 337 TVG---TREESQRVIDALRA 353 (356)
T ss_dssp ECC---CHHHHHHHHHHHHT
T ss_pred EeC---CHHHHHHHHHHHHh
Confidence 998 78999999999985
No 115
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.92 E-value=7.6e-24 Score=276.21 Aligned_cols=314 Identities=13% Similarity=0.117 Sum_probs=237.7
Q ss_pred CCCHHHHHHHHHHHhhhc-CCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCCc-EEEeCCHHHHHHHHHHhcc
Q psy15216 8 PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPRE-IIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~-~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g--~~~~~-Iv~t~g~T~al~~~~~~l~ 79 (2602)
++++.+.+++.+.+.... .++.. . ...++|+.+++++ | +++++ |++|+|+++|+.+++.++.
T Consensus 39 ~~~~~v~~a~~~~~~~~~~~y~~~------~----g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~ 108 (389)
T 1gd9_A 39 DTPQHIKEYAKEALDKGLTHYGPN------I----GLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFL 108 (389)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCT------T----CCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCC------C----CcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhC
Confidence 468899999998886521 12111 1 1345566666665 8 46788 9999999999999999987
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC--CCccChHHHHhhccCCceEEEEecccCccccccc---
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP--- 154 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~--- 154 (2602)
++||+|+++.++|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++|
T Consensus 109 ----~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~ 181 (389)
T 1gd9_A 109 ----KDGEEVLIPTPAFVSYAPAVILA---GGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKD 181 (389)
T ss_dssp ----CTTCEEEEEESCCTTHHHHHHHH---TCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred ----CCCCEEEEcCCCchhHHHHHHHC---CCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHH
Confidence 79999999999999988777665 99999999875 4578999999999989999999999999999996
Q ss_pred HHHHHHHHHhcCCEEEEecccccccc----cccCCC----CCccEEEeccccccCCCC--cEEEEEecCCCCcccceecC
Q psy15216 155 ILEIGELCRSKGVIFHCDAAQAVGKI----DINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHG 224 (2602)
Q Consensus 155 l~~I~~la~~~g~~livD~a~a~g~~----~~dl~~----~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g 224 (2602)
+++|+++|++||+++|+|++|+.+.. +..+.. .+.|+++.|+||.+|++| +||+++++++++.+.+...+
T Consensus 182 l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~ 261 (389)
T 1gd9_A 182 LEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMY 261 (389)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhh
Confidence 88899999999999999999986543 122222 357899999999999888 79999998777666544321
Q ss_pred CCccccccccCcchhHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc--c
Q psy15216 225 GGHEYGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--F 300 (2602)
Q Consensus 225 ~~~~~~~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~--~ 300 (2602)
..++++.....++.++|+.... ++++..++++++++++.+.|.+ . ++.+..+.. +....+.++ .
T Consensus 262 -------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~~~~~ 329 (389)
T 1gd9_A 262 -------NATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNE-M-GLPTVKPKG---AFYIFPRIRDTG 329 (389)
T ss_dssp -------TTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCCCCCB---TTEECCBCGGGT
T ss_pred -------hccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHH-c-CCeecCCCe---eeEEEEeccCCC
Confidence 1245666666667677774333 6788899999999999999987 4 666554322 222333444 2
Q ss_pred cChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 301 IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 301 ~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.+..++...| +||.+++|..|.+. ..+++||+++. +++++++++++|++.
T Consensus 330 ~~~~~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRi~~~~--~~~~i~~~l~~l~~~ 382 (389)
T 1gd9_A 330 LTSKKFSELMLKEARVAVVPGSAFGKA-----------------GEGYVRISYAT--AYEKLEEAMDRMERV 382 (389)
T ss_dssp CCHHHHHHHHHHHTCEECEEGGGGCGG-----------------GTTBEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCCC-----------------CCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 3556666665 69999998876431 13789999984 899999999999863
No 116
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.92 E-value=8.9e-24 Score=274.85 Aligned_cols=312 Identities=14% Similarity=0.096 Sum_probs=232.1
Q ss_pred CCCCHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g--~~~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
.+.++.+.+++.+.+... ..++.. ....++|+.+++++ | +++++|++|+|+++|+++++.++.
T Consensus 43 ~~~~~~v~~a~~~~~~~~~~~y~~~----------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~ 112 (385)
T 1b5p_A 43 FDTPEHVKEAARRALAQGKTKYAPP----------AGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL 112 (385)
T ss_dssp SCCCHHHHHHHHHHHHTTCCSCCCT----------TCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHhcCCCCCCCC----------CCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhc
Confidence 355678889988887642 122221 11346677777766 4 367899999999999999999986
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC--CCCcChhHHHhhccCCceEEEEeccccccccccC---
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP--- 1550 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~--- 1550 (2602)
++||+|++++|+|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++|
T Consensus 113 ----~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~ 185 (385)
T 1b5p_A 113 ----DPGDEVIVLSPYWVSYPEMVRFA---GGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEV 185 (385)
T ss_dssp ----CTTCEEEEEESCCTHHHHHHHHT---TCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred ----CCCCEEEEcCCCchhHHHHHHHc---CCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHH
Confidence 89999999999999887766554 99999999875 5679999999999999999999999999999988
Q ss_pred hHHHHHHhhhcCCEEEEecccccCcc---cccCCCC--CccEEEEccccccCCCc--eEEEEEecCCCCccccccccCCc
Q psy15216 1551 ILEIGELCRSKGVIFHCDAAQAVGKI---DINIQNY--KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGH 1623 (2602)
Q Consensus 1551 l~~I~~ia~~~gi~vivD~a~~~g~~---~~~l~~~--~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~ 1623 (2602)
+++|+++|++||+++|+|++|+.... ..++..+ +.++++.|+||.+|++| +||+++++++++.+.+....
T Consensus 186 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~--- 262 (385)
T 1b5p_A 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQ--- 262 (385)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHT---
T ss_pred HHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhh---
Confidence 88999999999999999999875332 1122222 56788999999999888 89999987766655543211
Q ss_pred cccCCCCCcchhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe--cCC
Q psy15216 1624 EYGLRSGTLATHQIVGMGEAFRL---ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--FIE 1698 (2602)
Q Consensus 1624 ~~~~~~gt~~~~~~~al~~aL~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~--~~~ 1698 (2602)
...+++...+.++.++|+. ....+++.++++.++++++.+.|.+ . ++.+..+... ....+.++ +.+
T Consensus 263 ----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~---~~~~~~~~~~~~~ 333 (385)
T 1b5p_A 263 ----STTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTA-L-GLKAVRPSGA---FYVLMDTSPIAPD 333 (385)
T ss_dssp ----TTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-TCCBCCCSBT---TEEEEECTTTCSS
T ss_pred ----ccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCCee---EEEEEecCCCCCC
Confidence 1124455555556667753 3455778889999999999999987 3 6655433221 11222332 235
Q ss_pred cHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1699 GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1699 ~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
..++...| +||.+++|..|... +++|||++ ++.+++++++++|++
T Consensus 334 ~~~l~~~l~~~gv~v~~g~~f~~~-------------------~~iRis~~--~~~~~i~~~l~~l~~ 380 (385)
T 1b5p_A 334 EVRAAERLLEAGVAVVPGTDFAAF-------------------GHVRLSYA--TSEENLRKALERFAR 380 (385)
T ss_dssp HHHHHHHHHHTTEECEESGGGTCT-------------------TEEEEECC--SCHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHCCeEEecccccCCC-------------------CeEEEEec--CCHHHHHHHHHHHHH
Confidence 56676666 79999999877432 78999988 789999999999886
No 117
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.92 E-value=1.6e-23 Score=267.50 Aligned_cols=310 Identities=15% Similarity=0.147 Sum_probs=236.5
Q ss_pred eceeeeccCC--CCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q psy15216 1392 PYTNIVFKDA--TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNL 1469 (2602)
Q Consensus 1392 P~~~v~L~~~--~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~ 1469 (2602)
+...++|+.+ ..++++.+.+++.+.+.....+|+. ...++|+++++++|+++++|++|+|+++++++
T Consensus 15 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~y~~~-----------~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~ 83 (337)
T 3p1t_A 15 AAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFD-----------AEPRVMRKLAEHFSCPEDNLMLVRGIDECFDR 83 (337)
T ss_dssp CCCCEECSSCCCCSCCCHHHHHHHHHHGGGTTSCCTT-----------HHHHHHHHHHHHHTSCGGGEEEESHHHHHHHH
T ss_pred CCCceEeeCCCCCCCCCHHHHHHHHHhhhhhccCCCC-----------chHHHHHHHHHHhCcCHHHEEEeCCHHHHHHH
Confidence 4455667543 3467889999999988764444432 36789999999999988899999999999999
Q ss_pred HHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEecccccccccc
Q psy15216 1470 AIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQ 1549 (2602)
Q Consensus 1470 al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~ 1549 (2602)
++.++ +||+|++++|+|+++...++ ..|++++.++.++++.+|+++++++ .+++++++++|+||||.++
T Consensus 84 ~~~~~------~gd~vl~~~p~~~~~~~~~~---~~g~~~~~v~~~~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~ 152 (337)
T 3p1t_A 84 ISAEF------SSMRFVTAWPGFDGYRARIA---VSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQAL 152 (337)
T ss_dssp HHHHS------TTSEEEEESSSCSHHHHHHT---TSCCEEEEECBCTTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCC
T ss_pred HHHhc------CCCeEEEeCCCcHHHHHHHH---HcCCEEEEecCCCCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCC
Confidence 98875 79999999999999776554 4499999999988888999999987 5789999999999999999
Q ss_pred ChHHHHHHhhhcCCEEEEeccccc--CcccccCCCCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCCccc
Q psy15216 1550 PILEIGELCRSKGVIFHCDAAQAV--GKIDINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEY 1625 (2602)
Q Consensus 1550 ~l~~I~~ia~~~gi~vivD~a~~~--g~~~~~l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~ 1625 (2602)
|+++|.++|+++++ +++|++|+. +..+......+.++++.|+||.+|++| +||+++++++++.+....
T Consensus 153 ~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~------- 224 (337)
T 3p1t_A 153 SAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ------- 224 (337)
T ss_dssp CHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTS-------
T ss_pred CHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhc-------
Confidence 99999999999997 566999862 221222233356799999999888777 699999877665554321
Q ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHh
Q psy15216 1626 GLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMA 1705 (2602)
Q Consensus 1626 ~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1705 (2602)
..++++...+.++..+++.. ..+.+..++..++++++.+.|.+ . ++.+..+ ...++++...+...+...
T Consensus 225 --~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~------~~~~~~~~~~~~~~~~~~ 293 (337)
T 3p1t_A 225 --WFCNVGTLDLHALEAALDND-RAREAHIAKTLAQRRRVADALRG-L-GYRVASS------EANFVLVENAAGERTLRF 293 (337)
T ss_dssp --CTTCSCHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHHHHHHHHH-T-TCCBCCC------SSSEEEEECTTTHHHHHH
T ss_pred --CCCCCCHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHH-C-cCEECCC------CCeEEEEEcCCHHHHHHH
Confidence 23466777777776777632 23556667777888999999987 3 6554422 122345555555555555
Q ss_pred c--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1706 I--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1706 L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
| +||.+++|..|..+ +++|+|++ +.+++++++++|++
T Consensus 294 l~~~gi~v~~g~~~~~~-------------------~~iRis~~---~~~~~~~l~~al~~ 332 (337)
T 3p1t_A 294 LRERGIQVKDAGQFGLH-------------------HHIRISIG---REEDNDRLLAALAE 332 (337)
T ss_dssp HHHTTEECEEGGGGTCC-------------------SEEEEECC---CHHHHHHHHHHHHH
T ss_pred HHHCCeEEEECccCCCC-------------------CeEEEecC---CHHHHHHHHHHHHH
Confidence 5 89999999887543 79999988 79999999999987
No 118
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=2.2e-24 Score=279.62 Aligned_cols=318 Identities=13% Similarity=0.112 Sum_probs=240.2
Q ss_pred cCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHH
Q psy15216 1421 FGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR 1500 (2602)
Q Consensus 1421 ~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~ 1500 (2602)
++++.. ++.+..+.+.++++++.+++++|++ +.++||+|+|+|++.++..+ ++||+|++++++|+++. ...
T Consensus 21 ~~~~~~--~h~~~~~~~~~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~~~-----~~gd~vi~~~~~~~~~~-~~~ 91 (379)
T 3ke3_A 21 YTDRAL--NHMSKAFQEVMNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVARQL-----TIDEDCLIIRNGWFSYR-WTQ 91 (379)
T ss_dssp CCTTSC--CTTSHHHHHHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHHHH-----CTTCEEEEEECSHHHHH-HHH
T ss_pred ccCCCC--CCCCHHHHHHHHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHHhC-----CCCCeEEEEeCCchhHH-HHH
Confidence 456643 3346677789999999999999987 67899999999999987543 58999999999998753 223
Q ss_pred HHHhCC--cEEEEeccCCC---------CCcChhHHHhhcc-CCceEEEEeccccccccccC---hHHHHHHhhhcCCEE
Q psy15216 1501 KLENDG--FRVTYLKPKNN---------GLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIF 1565 (2602)
Q Consensus 1501 ~~~~~G--~~v~~v~~~~~---------~~id~d~l~~~i~-~~t~lv~l~~~~n~tG~~~~---l~~I~~ia~~~gi~v 1565 (2602)
.+...| .+++.++.+.. +.+|++++++++. ++|++|++++++|+||.+.| +++|.++|++||+++
T Consensus 92 ~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~l 171 (379)
T 3ke3_A 92 ILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLL 171 (379)
T ss_dssp HHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEE
Confidence 333334 58888876431 2589999999995 58999999999999999999 999999999999999
Q ss_pred EEecccccCcccccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCccccccccCC-------------cccc--CCC
Q psy15216 1566 HCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGG-------------HEYG--LRS 1629 (2602)
Q Consensus 1566 ivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~~~~g~~-------------~~~~--~~~ 1629 (2602)
|+|++|+ |..++++..+++|++++|+|| +.||+|+|++++++++++.+.+...... .+.+ ...
T Consensus 172 i~D~~~~-g~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 250 (379)
T 3ke3_A 172 VIDCIAS-GCVWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYH 250 (379)
T ss_dssp EEECTTC-TTCCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCS
T ss_pred EEEeccc-CCccccccccCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCC
Confidence 9999999 888888877889999999999 6678899999999876555433110000 0011 113
Q ss_pred CCcchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--
Q psy15216 1630 GTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI-- 1706 (2602)
Q Consensus 1630 gt~~~~~~~al~~aL~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L-- 1706 (2602)
+|+++..++++.++|++... +++++.++..++++++++.|.+ + |+.+..++....+.+..+..+..+. .+...|
T Consensus 251 ~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~-g~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~L~~ 327 (379)
T 3ke3_A 251 ATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTD-K-GIESVAAEGFEAPGVVVSYTERDDM-HKGSAFAE 327 (379)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSBCTTCBCSSEEEEECSCHHH-HSSHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCEecCCccccCceEEEEccCCcch-HHHHHHHH
Confidence 58999999999999996554 5899999999999999999988 3 7776655444445444433322111 112233
Q ss_pred CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1707 KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1707 ~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+||.+++|.+|... .....+.+|+|++.++|.+||++++++|++.
T Consensus 328 ~Gi~v~~g~~~~~~--------------~~~~~~~lRis~~~~~t~~di~~~~~~l~~~ 372 (379)
T 3ke3_A 328 AGLQIAAGVPLKVG--------------EPDNFKTFRLGLFGLDKLTDIDGTVERFEKA 372 (379)
T ss_dssp TTCCCEECCCCSSC--------------CCTTCCEEEEECCSHHHHTCHHHHHHHHHHH
T ss_pred CCeEEeCCcccccc--------------ccCcCCEEEEeCCcCCCHHHHHHHHHHHHHH
Confidence 79999988766431 0011378999999999999999999999873
No 119
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.92 E-value=5.7e-23 Score=274.83 Aligned_cols=336 Identities=15% Similarity=0.070 Sum_probs=250.6
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCC--CCcE---EEeCCHHHHHHHHHHhhhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PREI---IWTSGATESNNLAIKGAAHF 1477 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~--~~~i---v~t~gaT~al~~al~~l~~~ 1477 (2602)
...++.+.+++.+.+...+.+++. .+...++..++++++++++|++ ++++ ++|+|+|+|+.+++.++...
T Consensus 66 ~~~~~~v~~~l~~~~~~~~~~~~~-----~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~ 140 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRK 140 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBTTCTTT-----CHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCCCChhc-----ChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHH
Confidence 466788889988887665444432 3346678889999999999997 5543 46999999999999888632
Q ss_pred hc----cCCC-----EEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC-CCcChhHHHhhccCCceEEEEecccccccc
Q psy15216 1478 YK----KRGK-----HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGV 1547 (2602)
Q Consensus 1478 ~~----~~gd-----~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~id~d~l~~~i~~~t~lv~l~~~~n~tG~ 1547 (2602)
.. .+|+ +|+++.++|+++...+..+ |+.++.++++++ +.+|+++|+++|+++|++|++++++||||.
T Consensus 141 ~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~---G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~ 217 (502)
T 3hbx_A 141 WQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYF---EVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGE 217 (502)
T ss_dssp HHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHT---TCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCC
T ss_pred HhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHc---CceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCc
Confidence 11 1266 9999999999988776665 999999998875 889999999999999999999999999999
Q ss_pred ccChHHHHHHhhhc------CCEEEEecccccCc-------ccccCCCCCccEEEEccccc-cCCCceEEEEEecC-CCC
Q psy15216 1548 IQPILEIGELCRSK------GVIFHCDAAQAVGK-------IDINIQNYKVDLMSFSAHKI-YGPKGIGALYIRRN-PRT 1612 (2602)
Q Consensus 1548 ~~~l~~I~~ia~~~------gi~vivD~a~~~g~-------~~~~l~~~~~D~~v~S~~K~-~gp~G~G~l~~~~~-~~~ 1612 (2602)
+.|+++|.++|++| |+++++|+||+.+. .+.++...++|++++|+||+ ++|.|+|+++++++ .+.
T Consensus 218 ~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~ 297 (502)
T 3hbx_A 218 FEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (502)
T ss_dssp BCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSC
T ss_pred ccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEEEEeCHHHhh
Confidence 99999999999999 99999999998443 23344445799999999995 58999999999753 332
Q ss_pred cc---ccccccCCccccCCCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCc
Q psy15216 1613 RI---EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPH 1688 (2602)
Q Consensus 1613 ~l---~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~ 1688 (2602)
.. .+.+.++........++.+...+.++..++.. ...++.++.++..++++++.+.|.+ .+++.+..+.. ..+
T Consensus 298 ~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~--~~~ 374 (502)
T 3hbx_A 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEK-TERFNIVSKDE--GVP 374 (502)
T ss_dssp GGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCEEECSCSS--SSS
T ss_pred HHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCC--Cce
Confidence 21 22333332222222355665567777777774 4567889999999999999999988 67898875411 124
Q ss_pred eEEEEEec---CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 1689 NLNISFNF---IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 1763 (2602)
Q Consensus 1689 ~~~~~~~~---~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~ 1763 (2602)
+..|.++. .+..++...| +||.++....... .....++|++++..+|.+|++++++.|+
T Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~----------------~~~~~~lRisv~~~~t~edid~li~~L~ 438 (502)
T 3hbx_A 375 LVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPN----------------AQHITVLRVVIREDFSRTLAERLVIDIE 438 (502)
T ss_dssp EEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTT----------------CTTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred EEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcc----------------cCCceEEEEEeCCCCCHHHHHHHHHHHH
Confidence 55566653 2334677766 7887753221111 0112689999999999999999999999
Q ss_pred Hh
Q psy15216 1764 MK 1765 (2602)
Q Consensus 1764 ~~ 1765 (2602)
+.
T Consensus 439 ~~ 440 (502)
T 3hbx_A 439 KV 440 (502)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 120
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.92 E-value=1.3e-24 Score=289.50 Aligned_cols=334 Identities=17% Similarity=0.185 Sum_probs=249.2
Q ss_pred CCCCCCCHHHHHHHHHHHhhhc--CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCc----EEEeCCHHHHHHHHHHh
Q psy15216 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE----IIWTSGATESNNLAIKG 77 (2602)
Q Consensus 4 a~~~~~p~~v~~a~~~~l~~~~--~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~----Iv~t~g~T~al~~~~~~ 77 (2602)
++.+++|+.+++++.+.+.+.+ ++|+...|..+.......+.+++++++++|+++++ |++++|+ +++.+++.+
T Consensus 51 a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~a 129 (483)
T 1rv3_A 51 ASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTA 129 (483)
T ss_dssp TTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHH
Confidence 4556899999999999887755 56665444444455667788999999999998654 7777777 888888888
Q ss_pred cccccccCCCEEEEcCCCCcccHHHHHHH-----HhCC--cEEEEeccC-CCCccChHHHHhhcc-CCceEEEEecccCc
Q psy15216 78 AAHFYKKRGKHIITVQTEHKSVLDSIRKL-----ENDG--FRVTYLKPK-NNGLITLSQLEEKIC-SDTILVSVMLVNNE 148 (2602)
Q Consensus 78 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-----~~~G--~~v~~v~~~-~~~~ld~e~l~~~i~-~~tklv~i~~~~np 148 (2602)
+. +|||+|++++++|+++...+... ...| .+++.++++ +++.+|+++|+++++ ++||+|++ +++|+
T Consensus 130 ll----~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~ 204 (483)
T 1rv3_A 130 LV----EPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCY 204 (483)
T ss_dssp HT----CTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC
T ss_pred hc----CCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcC
Confidence 87 89999999999999986533111 0013 556666556 568899999999998 89999999 99999
Q ss_pred ccccccHHHHHHHHHhcCCEEEEecccccccccccCCCC---CccEEEecccc-ccCCCCcEEEEEecCCCCcccceecC
Q psy15216 149 IGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNY---KVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHG 224 (2602)
Q Consensus 149 TG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~---~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~~~g 224 (2602)
+ .++|+++|.++|+++|+++++|++|+.|..+.+.... ++|++++|+|| +.||+| |+++++++... +. ...|
T Consensus 205 ~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l~Gprg-G~i~~~~~~~~-~~-~~~g 280 (483)
T 1rv3_A 205 S-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRA-GMIFYRRGVRS-VD-PKTG 280 (483)
T ss_dssp C-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEEECSBCC--------
T ss_pred C-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccCCCCCc-eEEEEcchhhh-hc-cccC
Confidence 9 9999999999999999999999999887665554444 68999999999 568998 99999987542 21 0000
Q ss_pred CC----c-------cccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCc
Q psy15216 225 GG----H-------EYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPH 292 (2602)
Q Consensus 225 ~~----~-------~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~ 292 (2602)
+. . ......|+++.+.++++.+|++... .++++..+++.++++++.+.|.+ . |+++..+.. ..+
T Consensus 281 ~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~--~~~ 356 (483)
T 1rv3_A 281 KEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE-L-GYKIVTGGS--DNH 356 (483)
T ss_dssp -CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEGGGSC--SSS
T ss_pred cchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh-c-CCEeccCCC--CCc
Confidence 00 0 0011257888888999888998553 46788999999999999999988 3 888876532 123
Q ss_pred eEEEEEcc--cChhHHHHHh--CCeEEc----ccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCC----HHHHH
Q psy15216 293 NLNISFNF--IEGESLLMAI--KDIAVS----SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT----EKEID 360 (2602)
Q Consensus 293 ~~~~~~~~--~~~~~~~~~L--~gI~v~----~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t----~edid 360 (2602)
...+.+.. .+..++...| .||.++ +|..|.. ..+++||+++.++| ++|++
T Consensus 357 ~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~------------------~~~~iRis~~~~~t~g~~~edi~ 418 (483)
T 1rv3_A 357 LILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSAL------------------RPSGLRLGTPALTSRGLLEKDFQ 418 (483)
T ss_dssp EEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTT------------------SCCEEEEECHHHHHTTCCHHHHH
T ss_pred eEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCC------------------CCceEEeecCCcccCCCCHHHHH
Confidence 44555542 3556666656 799988 6653321 13789999998777 99999
Q ss_pred HHHHHHHhh
Q psy15216 361 FTIKLLKMK 369 (2602)
Q Consensus 361 ~li~~L~~~ 369 (2602)
+++++|++.
T Consensus 419 ~~~~~l~~~ 427 (483)
T 1rv3_A 419 KVAHFIHRG 427 (483)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999864
No 121
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.91 E-value=1.1e-23 Score=274.94 Aligned_cols=320 Identities=12% Similarity=0.157 Sum_probs=244.3
Q ss_pred CCCCCHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1402 TTPIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g--~~~~~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
..+.++.+.+++.+.+... ..++. ...+..+++++.+++++| +++++|++|+|+|+|++.++.++.
T Consensus 43 ~~~~~~~v~~a~~~~~~~~~~~y~~--------~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~--- 111 (391)
T 4dq6_A 43 DFKAAPCIIDSLKNRLEQEIYGYTT--------RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELT--- 111 (391)
T ss_dssp SSCCCHHHHHHHHHHHTTCCCCCBC--------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS---
T ss_pred CCCCCHHHHHHHHHHHhCCCCCCCC--------CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhC---
Confidence 3467889999999988652 11111 124577888999999999 678899999999999999999986
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccC--C--CCCcChhHHHhhccCCceEEEEeccccccccccC---h
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--N--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 1551 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~--~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l 1551 (2602)
++||+|+++.++|+++...+... |++++.++.+ . ++.+|+++|++++++ +++|++++|+||||.++| +
T Consensus 112 -~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l 186 (391)
T 4dq6_A 112 -KANDKIMIQEPVYSPFNSVVKNN---NRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDEL 186 (391)
T ss_dssp -CTTCEEEECSSCCTHHHHHHHHT---TCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHH
T ss_pred -CCCCEEEEcCCCCHHHHHHHHHc---CCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHH
Confidence 89999999999999987766654 9999999987 2 235899999999999 999999999999999965 7
Q ss_pred HHHHHHhhhcCCEEEEecccccCc----ccccCCCCCc-----cEEEEccccccCCCc--eEEEEEec-CCCCccccccc
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGK----IDINIQNYKV-----DLMSFSAHKIYGPKG--IGALYIRR-NPRTRIEAQIH 1619 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~----~~~~l~~~~~-----D~~v~S~~K~~gp~G--~G~l~~~~-~~~~~l~~~~~ 1619 (2602)
++|.++|++||+++|+|++|+... .+.++..+.. .+++.|+||.+|++| +|++++++ ++.+.+.....
T Consensus 187 ~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 266 (391)
T 4dq6_A 187 KKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFT 266 (391)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHH
Confidence 888999999999999999997632 2223333333 388899999777666 79999876 55555543321
Q ss_pred cCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--C
Q psy15216 1620 GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--I 1697 (2602)
Q Consensus 1620 g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--~ 1697 (2602)
....++++...+.++.+++......+++..+++.++++++.+.|.+.++++.+..+... ....+.++. .
T Consensus 267 ------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 337 (391)
T 4dq6_A 267 ------RIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGT---YLLWVDFSALGL 337 (391)
T ss_dssp ------HTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBS---SEEEEECGGGCC
T ss_pred ------hhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCcc---EEEEEEhhhcCC
Confidence 12234677777777777777544557888899999999999999875678887654322 222344542 3
Q ss_pred CcHHHHHhc--C-CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1698 EGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1698 ~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+..++...| + ||.+++|..|... ..+++|++++ ++.+++++++++|++.
T Consensus 338 ~~~~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRis~~--~~~~~i~~~l~~l~~~ 389 (391)
T 4dq6_A 338 SDEELESILVQKGKVALNQGNSFGIG-----------------GSGYQRINLA--CPRSMLEEALIRIKNA 389 (391)
T ss_dssp CHHHHHHHHHHTTCEECEEGGGGCTT-----------------CTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCEEeeCchhhCCC-----------------CCCeEEEEEc--CCHHHHHHHHHHHHHH
Confidence 566777666 5 9999999887642 1389999998 6899999999999863
No 122
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.91 E-value=2.3e-23 Score=268.68 Aligned_cols=304 Identities=18% Similarity=0.143 Sum_probs=240.0
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
++|+.+.+++.+.+...+.+|.. ...++|+++++++++++++|++|+|+|+|+++++.++ |
T Consensus 39 ~~~~~v~~a~~~~~~~~~~y~~~-----------~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~--------d 99 (361)
T 3ftb_A 39 GIPKSFLNNIDEGIKNLGVYPDV-----------NYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF--------E 99 (361)
T ss_dssp CSCHHHHTTHHHHHHGGGSCCCT-----------TCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC--------S
T ss_pred CCCHHHHHHHHHHHHHhcCCCCc-----------cHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc--------C
Confidence 57899999999988876555543 2467899999999998899999999999999998876 8
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCccccccc---HHHHHHHHHh
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELCRS 164 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l~~I~~la~~ 164 (2602)
+|+++.+.|+++...+... |++++.++.++++.++++++++++++ ++++++++|+||||.++| +++|+++|++
T Consensus 100 ~vi~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 175 (361)
T 3ftb_A 100 KILIIVPSYAEYEINAKKH---GVSVVFSYLDENMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEE 175 (361)
T ss_dssp EEEEEESCCTHHHHHHHHT---TCEEEEEECCTTSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHH
T ss_pred cEEEecCChHHHHHHHHHc---CCeEEEeecCcccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhh
Confidence 9999999999987776655 99999999988878899999999988 999999999999999998 5567777889
Q ss_pred cCCEEEEeccccccccc-----ccC-CCCCccEEEeccccccCCCC--cEEEE-EecCCCCcccceecCCCccccccccC
Q psy15216 165 KGVIFHCDAAQAVGKID-----INI-QNYKVDLMSFSAHKIYGPKG--IGALY-IRRNPRTRIEAQIHGGGHEYGLRSGT 235 (2602)
Q Consensus 165 ~g~~livD~a~a~g~~~-----~dl-~~~~~D~~~~S~~K~~Gp~G--~G~l~-~~~~~~~~l~~~~~g~~~~~~~~~gt 235 (2602)
||+++|+|++|+..... ... ...+..+++.|+||.+|++| +||++ .++++.+.+.+.. ..++
T Consensus 176 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~---------~~~~ 246 (361)
T 3ftb_A 176 KKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQ---------NPWN 246 (361)
T ss_dssp HTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTS---------CTTC
T ss_pred cCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhC---------CCCC
Confidence 99999999998744321 111 12234577889999888776 68888 6666655554322 2346
Q ss_pred cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceE-EeCCCCCCCCceEEEEEcccChhHHHHHh--CC
Q psy15216 236 LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIY-INGDMNNRIPHNLNISFNFIEGESLLMAI--KD 312 (2602)
Q Consensus 236 ~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~g 312 (2602)
++.....++.++++. ..++++..++..++++++.+.|.+ ++++. +..+.. ....+.++..+..++...| +|
T Consensus 247 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~g 320 (361)
T 3ftb_A 247 INCFAEMAAINCLKD-TNYIEESLLWIKKERKRFIEELNK-IGFIKRVFSPHA----NFVLCRLENISGEKLYDSLLKED 320 (361)
T ss_dssp SCHHHHHHHHHTSSC-HHHHHHHHHHHHHHHHHHHHHHHH-SSSEEEEECCSS----SEEEEEESSSCHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHh-CCCCceecCCCC----eEEEEEcCCCCHHHHHHHHHHCC
Confidence 777888877777773 456788899999999999999987 78888 664432 3445566655677777777 79
Q ss_pred eEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 313 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 313 I~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
|.+++|..|.+. ..+++|++++ +.+++++++++|++.
T Consensus 321 i~v~~g~~~~~~-----------------~~~~iRis~~---~~~~~~~l~~~l~~~ 357 (361)
T 3ftb_A 321 IVIRRCCNFIGL-----------------DDSFVRFAIK---DEKKNTKFLRALKGV 357 (361)
T ss_dssp EECEECTTSTTC-----------------CTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred eEEeeCccCCCC-----------------CCCEEEEEcC---CHHHHHHHHHHHHHH
Confidence 999999877531 2389999998 889999999999863
No 123
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.91 E-value=5.7e-24 Score=275.35 Aligned_cols=312 Identities=16% Similarity=0.146 Sum_probs=235.1
Q ss_pred CCCCCC-CCCHHHHHHHHHHHhhh-cCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHH
Q psy15216 2 DYSATT-PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNL 73 (2602)
Q Consensus 2 d~a~~~-~~p~~v~~a~~~~l~~~-~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g------~~~~~Iv~t~g~T~al~~ 73 (2602)
+.+... ++|+.+.+++.+.+... ..++.. ....++|+.++++++ +++++|++|+|+++|+++
T Consensus 35 ~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~----------~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~ 104 (370)
T 2z61_A 35 EIGEPDFNTPKPIVDEGIKSLKEGKTHYTDS----------RGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFF 104 (370)
T ss_dssp CCCSCSSCCCHHHHHHHHHHHHTTCCSCCCT----------TCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHcCccCCCCC----------CCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHH
Confidence 333333 35788999999888642 112211 123456666766664 567899999999999999
Q ss_pred HHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccc
Q psy15216 74 AIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQ 153 (2602)
Q Consensus 74 ~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~ 153 (2602)
++.++. ++||+|++++++|+++...+... |++++.++ +|+++|++++++++++|++++|+||||.++
T Consensus 105 ~~~~~~----~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~v~------~d~~~l~~~l~~~~~~v~~~~p~nptG~~~ 171 (370)
T 2z61_A 105 ALSSII----DDGDEVLIQNPCYPCYKNFIRFL---GAKPVFCD------FTVESLEEALSDKTKAIIINSPSNPLGEVI 171 (370)
T ss_dssp HHHHHC----CTTCEEEEESSCCTHHHHHHHHT---TCEEEEEC------SSHHHHHHHCCSSEEEEEEESSCTTTCCCC
T ss_pred HHHHhc----CCCCEEEEeCCCchhHHHHHHHc---CCEEEEeC------CCHHHHHHhcccCceEEEEcCCCCCcCccc
Confidence 999987 79999999999999987766544 99999987 689999999998999999999999999999
Q ss_pred cHHHHHHHHHhcCCEEEEecccccccc---cccCC----CCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecC
Q psy15216 154 PILEIGELCRSKGVIFHCDAAQAVGKI---DINIQ----NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHG 224 (2602)
Q Consensus 154 ~l~~I~~la~~~g~~livD~a~a~g~~---~~dl~----~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g 224 (2602)
|.+ |.++|++||+++|+|++|+.+.. +.++. ..+.|+++.|+||.+|++| +||+++++++++.+.+...+
T Consensus 172 ~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 250 (370)
T 2z61_A 172 DRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQN 250 (370)
T ss_dssp CHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHH
T ss_pred CHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhh
Confidence 999 99999999999999999986543 22222 2357899999999999888 89999998777666543311
Q ss_pred CCccccccccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccCh
Q psy15216 225 GGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEG 303 (2602)
Q Consensus 225 ~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 303 (2602)
..++++.....++.++|+. ...++++..+++.++++++.+.|.+ . ++.+..+.. +....+.++. +.
T Consensus 251 -------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~~~-~~ 317 (370)
T 2z61_A 251 -------LFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKD-F-GWEVNNPIG---AYYVFPNIGE-DG 317 (370)
T ss_dssp -------HTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCBCCCCCB---TTEECCBCSS-CH
T ss_pred -------cccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH-c-CCeecCCCc---ceEEEEecCC-CH
Confidence 1246677777777677764 4566788889999999999999987 4 666554322 2222233333 55
Q ss_pred hHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 304 ESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 304 ~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++...| +||.+++|..|... ..+++||+++ ++++++++++++|++.
T Consensus 318 ~~~~~~l~~~~gi~v~~g~~f~~~-----------------~~~~~Ri~~~--~~~~~i~~~~~~l~~~ 367 (370)
T 2z61_A 318 REFAYKLLKEKFVALTPGIGFGSK-----------------GKNYIRISYA--NSYENIKEGLERIKEF 367 (370)
T ss_dssp HHHHHHHHHHHCEECEEGGGGCGG-----------------GSSBEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEeCchhhCCC-----------------CCCEEEEEEe--CCHHHHHHHHHHHHHH
Confidence 6666665 59999998776420 1378999998 6999999999999863
No 124
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.91 E-value=1.3e-23 Score=276.93 Aligned_cols=313 Identities=16% Similarity=0.110 Sum_probs=240.6
Q ss_pred CCCCHHHHHHHHHHHhhhc--CCCCCCCcchhhhHHHHHHHHHHHHHHHhC-----CCCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 7 TPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIY-----ADPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~--~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g-----~~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
.++++.+.+++.+.+.... .++. .....++|++++++++ +++++|++|+|+|+|+++++.++.
T Consensus 70 ~~~~~~v~~a~~~~~~~~~~~~y~~----------~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~ 139 (427)
T 3dyd_A 70 LPTDPEVTQAMKDALDSGKYNGYAP----------SIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLA 139 (427)
T ss_dssp SCCCHHHHHHHHHHHHHCCSSSCCC----------TTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHhcCcCCCCCC----------CCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhc
Confidence 4789999999999887521 1211 1235678999999998 678899999999999999999987
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC--CCccChHHHHhhccCCceEEEEecccCccccccc---
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP--- 154 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~--- 154 (2602)
++||+|+++.|.|+++...+... |++++.++.++ ++.+|+++++++++++++++++++|+||||.++|
T Consensus 140 ----~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~ 212 (427)
T 3dyd_A 140 ----NPGQNILVPRPGFSLYKTLAESM---GIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRH 212 (427)
T ss_dssp ----CTTCEEEEEESCCTHHHHHHHHT---TCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred ----CCCCEEEEcCCCchhHHHHHHHc---CCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHH
Confidence 79999999999999877666554 99999998754 5678999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecccccc----cccccCCCCCcc---EEEeccccccCCCC--cEEEEEecCC-------CCcc
Q psy15216 155 ILEIGELCRSKGVIFHCDAAQAVG----KIDINIQNYKVD---LMSFSAHKIYGPKG--IGALYIRRNP-------RTRI 218 (2602)
Q Consensus 155 l~~I~~la~~~g~~livD~a~a~g----~~~~dl~~~~~D---~~~~S~~K~~Gp~G--~G~l~~~~~~-------~~~l 218 (2602)
+++|+++|++||+++|+|++|+.. .....+..++.+ +++.|+||.||++| +||+++++.. .+.+
T Consensus 213 l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l 292 (427)
T 3dyd_A 213 LQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGL 292 (427)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHH
Confidence 999999999999999999998752 222233223322 66789999988888 8999998631 1122
Q ss_pred cceecCCCccccccccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEE
Q psy15216 219 EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNIS 297 (2602)
Q Consensus 219 ~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~ 297 (2602)
.... ...++++.+...++.++|+. ...++++..+++.++++++.+.|.+ +|++.+..+.. ..+..+.
T Consensus 293 ~~~~--------~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~p~~---g~~~~~~ 360 (427)
T 3dyd_A 293 VKLS--------QRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAA-IPGLRPVRPSG---AMYLMVG 360 (427)
T ss_dssp HHHH--------HHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH-STTEEEECCSB---TTEEEEE
T ss_pred HHHH--------hccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc-CCCceecCCCe---eEEEEEe
Confidence 1111 11356777788878788873 3456788889999999999999987 68988765533 2334445
Q ss_pred Ecc------cChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 298 FNF------IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 298 ~~~------~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
++. .+..++...| +||.+.+|..|..+ +++||+++ ++++++++++++|++
T Consensus 361 l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~-------------------~~iRis~~--~~~e~i~~~l~~l~~ 419 (427)
T 3dyd_A 361 IEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYP-------------------NFIRVVIT--VPEVMMLEACSRIQE 419 (427)
T ss_dssp ECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCT-------------------TEEEEESC--SCHHHHHHHHHHHHH
T ss_pred cCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCC-------------------CeEEEEEC--CCHHHHHHHHHHHHH
Confidence 541 3445666555 69999999877542 89999987 689999999999986
Q ss_pred h
Q psy15216 369 K 369 (2602)
Q Consensus 369 ~ 369 (2602)
.
T Consensus 420 ~ 420 (427)
T 3dyd_A 420 F 420 (427)
T ss_dssp H
T ss_pred H
Confidence 3
No 125
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.91 E-value=1.2e-23 Score=275.27 Aligned_cols=316 Identities=14% Similarity=0.091 Sum_probs=239.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCE
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~ 88 (2602)
+++.+.+++.+.+.... +... .+.......+..+++++++++++|. +++++++|+|+|+.+++.++. ++||.
T Consensus 58 ~~~~v~~a~~~~~~~~~-~~~~-~~~~~~g~~~~~~~l~~~la~~~g~--~~v~~~~ggt~a~~~~~~~~~----~~gd~ 129 (398)
T 3a2b_A 58 TDTRIIKAAQDALEKYG-TGCA-GSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNLGPLSCLM----GRNDY 129 (398)
T ss_dssp GCHHHHHHHHHHHHHHC-SCCC-SBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHSS----CTTCE
T ss_pred CCHHHHHHHHHHHHHcC-CCCC-CcCcccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh----CCCCE
Confidence 78899999999886532 1111 1111122235778999999999996 489999999999999999987 89999
Q ss_pred EEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC----CceEEEEecccCcccccccHHHHHHHHHh
Q psy15216 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS----DTILVSVMLVNNEIGVIQPILEIGELCRS 164 (2602)
Q Consensus 89 Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~----~tklv~i~~~~npTG~~~~l~~I~~la~~ 164 (2602)
|+++.+.|+++...+... |++++.++. +|+++|++++++ ++++|++++++||||.+.|+++|.++|++
T Consensus 130 V~~~~p~~~~~~~~~~~~---g~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~ 201 (398)
T 3a2b_A 130 ILLDERDHASIIDGSRLS---FSKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANE 201 (398)
T ss_dssp EEEETTCCHHHHHHHHHS---SSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHH
T ss_pred EEECCccCHHHHHHHHHc---CCceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHH
Confidence 999999999987776654 999999985 589999999976 79999999999999999999999999999
Q ss_pred cCCEEEEecccccccc---cccC-C--C--CCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCccccccccCc
Q psy15216 165 KGVIFHCDAAQAVGKI---DINI-Q--N--YKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 236 (2602)
Q Consensus 165 ~g~~livD~a~a~g~~---~~dl-~--~--~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~ 236 (2602)
||+++|+|++|+.+.. ...+ . . .++|++++|+||++||+| ||+++++++++.+.+... .....+++
T Consensus 202 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~~~~~~~~~~~l~~~~~-----~~~~~~~~ 275 (398)
T 3a2b_A 202 FDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG-GFVAGDADVIDFLKHNAR-----SVMFSASM 275 (398)
T ss_dssp HTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC-EEEEECHHHHHHHHHHCH-----HHHSSBCC
T ss_pred cCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC-cEEEeCHHHHHHHHHhcc-----cceecCCC
Confidence 9999999999976532 1111 1 1 126899999999999998 999999877666654211 01123456
Q ss_pred chhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc-cChhHHHHHh--CCe
Q psy15216 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI--KDI 313 (2602)
Q Consensus 237 ~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~L--~gI 313 (2602)
+..+.+++.++|+.. .+.++.++++.++++++.+.|.+ + ++.+..+. ..++.+.++. .+..++...| +||
T Consensus 276 ~~~~~a~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----g~~~~~~~~~~~~~~~l~~~l~~~gi 348 (398)
T 3a2b_A 276 TPASVASTLKALEII-QNEPEHIEKLWKNTDYAKAQLLD-H-GFDLGATE----SPILPIFIRSNEKTFWVTKMLQDDGV 348 (398)
T ss_dssp CHHHHHHHHHHHHHH-HHCTHHHHHHHHHHHHHHHHHHH-T-TCCBCSCC----SSEEEEECCCHHHHHHHHHHHHHTTE
T ss_pred CHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHh-c-CCCcCCCC----CCEEEEEcCCHHHHHHHHHHHHHCCc
Confidence 666665666777754 34568888999999999999987 3 66655332 2334444432 2355666666 799
Q ss_pred EEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 314 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 314 ~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++++..|..+ ...+++||+++.+++++++++++++|++.
T Consensus 349 ~v~~~~~~~~~----------------~~~~~iRis~~~~~~~e~i~~~~~~l~~~ 388 (398)
T 3a2b_A 349 FVNPVVSPAVP----------------AEESLIRFSLMATHTYDQIDEAIEKMVKV 388 (398)
T ss_dssp ECEEECTTTSC----------------GGGCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCCC----------------CCCceEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99988776432 11378999999999999999999999964
No 126
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.91 E-value=4.2e-24 Score=283.19 Aligned_cols=329 Identities=15% Similarity=0.088 Sum_probs=235.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCC--C-------CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHH-HH
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPAS--R-------NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGAT-ES 70 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~--~-------~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T-~a 70 (2602)
|||++++|.|+.|++++.......+.++.. + .+..+.......+++++++++++|++++ +++|+|+| .+
T Consensus 84 ld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~~~t~g~te~a 162 (456)
T 2z67_A 84 PKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVH-AIATPISTGMS 162 (456)
T ss_dssp TTCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCCE-EEEESSCHHHH
T ss_pred ccccccccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCCC-EEEeCcHHHHH
Confidence 799999999999999987744222222211 0 0111123566788999999999999876 99999999 46
Q ss_pred HHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEecc---CCCCccChHHHHhhc-c----CCceEEEE
Q psy15216 71 NNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP---KNNGLITLSQLEEKI-C----SDTILVSV 142 (2602)
Q Consensus 71 l~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~---~~~~~ld~e~l~~~i-~----~~tklv~i 142 (2602)
+.+++.++.. +.+|++|+++.++|+++...+.. .|++++.++. ++++.+|+++|+++| + +++.+|++
T Consensus 163 ~~~al~~~~~--~~~~~~vi~~~~~h~s~~~~~~~---~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~ 237 (456)
T 2z67_A 163 ISLCLSAARK--KYGSNVVIYPYASHKSPIKAVSF---VGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLS 237 (456)
T ss_dssp HHHHHHHHHH--HHCCCEEEEECCCCHHHHHHHHH---TTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHH--hcCCCEEEEECCCcHHHHHHHHH---cCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEE
Confidence 6556666541 12678899999999997666554 4999999886 567889999999999 5 47888999
Q ss_pred ecccCcccccccHHHHHHHHHhcCCEEEEecccc---cccccccCCCC--CccEEEecccc-ccCCCCcEEEEEe-cCCC
Q psy15216 143 MLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA---VGKIDINIQNY--KVDLMSFSAHK-IYGPKGIGALYIR-RNPR 215 (2602)
Q Consensus 143 ~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a---~g~~~~dl~~~--~~D~~~~S~~K-~~Gp~G~G~l~~~-~~~~ 215 (2602)
++++||||.+.|+++|+++|+++|+++|+|+||+ .|..+.+...+ ++|++++|+|| +++|.|+|+++++ ++++
T Consensus 238 ~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~ 317 (456)
T 2z67_A 238 TLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFI 317 (456)
T ss_dssp ESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEESCHHHH
T ss_pred eCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEEcCHHHH
Confidence 9999999999999999999999999999998875 33444443222 78999999999 4678999999995 5555
Q ss_pred CcccceecCCCccccccccCcchhHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhhccC---ceEEeCCCCCCCC
Q psy15216 216 TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIE---EIYINGDMNNRIP 291 (2602)
Q Consensus 216 ~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~---g~~l~~~~~~~~~ 291 (2602)
+.+.+.+.|+ ..++ ..+++.+++. +...+++++.++..++++++.+.|.+ ++ |+.++.++
T Consensus 318 ~~l~~~~~g~------~~~~----~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~g~~v~~~~----- 381 (456)
T 2z67_A 318 KEISLSYPGR------ASAT----PVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLND-LSKKTGGKFLDVE----- 381 (456)
T ss_dssp HHHHTTSCSC------BCSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHSSCCBCCCC-----
T ss_pred hhcCcCCCCC------CCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccCCEecCCC-----
Confidence 5665544332 1112 2344445555 33467889999999999999999987 54 76665543
Q ss_pred ceEEEEEcccC-hhHHHHHh--CCe---EEc------ccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q psy15216 292 HNLNISFNFIE-GESLLMAI--KDI---AVS------SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 359 (2602)
Q Consensus 292 ~~~~~~~~~~~-~~~~~~~L--~gI---~v~------~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edi 359 (2602)
+.+.+.+...+ ..++...| ++| .+. .|.+|.. ...+++|+|++.++|++|+
T Consensus 382 ~~v~~~~~~~~~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~-----------------~~~~~vr~s~~~~~t~eei 444 (456)
T 2z67_A 382 SPIASCISVNSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGT-----------------YTHDYIVMNAAIGVRTEDI 444 (456)
T ss_dssp CSSEEEEECSSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSC-----------------CSCCEEEEECCTTCCHHHH
T ss_pred CeEEEEEecccHHHHHHHHHHHcCCCcceEEeecCccccccccc-----------------cCcchhhhhhhcCCCHHHH
Confidence 22334441112 24566656 554 232 1222221 1237899999999999999
Q ss_pred HHHHHHHHh
Q psy15216 360 DFTIKLLKM 368 (2602)
Q Consensus 360 d~li~~L~~ 368 (2602)
++++++|++
T Consensus 445 d~~l~~L~~ 453 (456)
T 2z67_A 445 VNSVSKLEK 453 (456)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999999985
No 127
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.91 E-value=6.4e-25 Score=277.29 Aligned_cols=297 Identities=19% Similarity=0.159 Sum_probs=203.7
Q ss_pred ceEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhcc-CCCCch-hhhhhhhCCCCCC
Q psy15216 637 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI-DPKNTI-SSIKRFIARDLKN 714 (2602)
Q Consensus 637 ~~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~-~p~~~~-~~~K~~lg~~~~~ 714 (2602)
.+.+|||+||+|+.+++ .+|. ....||+|+...+....+|. ...... ++..+. ..-...+|....
T Consensus 21 m~~igiDlG~~~tkv~~-~~g~---------~~~~PSvva~~~~~~~~~~~--~~~v~~~~g~~~~~~~~~~~vG~~A~- 87 (346)
T 2fsj_A 21 MVVVGLDVGYGDTKVIG-VDGK---------RIIFPSRWAVTETESWGIGG--KIPVLSTDGGQTKFIYGKYASGNNIR- 87 (346)
T ss_dssp CEEEEEEECSSEEEEEC-GGGC---------EEEEESCEEEECCSCC------CCCCBBSSTTSSEEEEGGGCCSSCCB-
T ss_pred eEEEEEecCCcceeEEe-cCCC---------EEEecceeeeccccccCcCc--ceEEEEecccccccCCcEEEEcccee-
Confidence 47799999999999874 2221 12469999886543211221 000000 000000 012223342211
Q ss_pred CCCCCCCeeeecCCCceEEEEeCceeCHHHHHHHHHHHHHHHHHHhhcCccceEE--EEEcCCCCHHHHHHHHHHHHHc-
Q psy15216 715 INTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAV--ITVPAYFNDIQRQFTKNAAKLA- 791 (2602)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~V--iTVPa~f~~~qr~~~~~Aa~~A- 791 (2602)
....++.+++++..++++..|++.++...+.+ .++| ||||++|++.||+++++|+..+
T Consensus 88 ------------------~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~ 148 (346)
T 2fsj_A 88 ------------------VPQGDGRLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKV 148 (346)
T ss_dssp ------------------CCSSTTCTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEE
T ss_pred ------------------cccCCCcccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCC
Confidence 11123445667778888888887653333333 5799 9999999999999999998765
Q ss_pred -------C------CceEEEechhHHHHHHhhhcc---CcccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCcc
Q psy15216 792 -------G------LNVLRLLNEPTSAAIAYKLDK---NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGG 855 (2602)
Q Consensus 792 -------G------l~~~~li~EPtAAAl~y~~~~---~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG 855 (2602)
| ++.+++++||+|||++| ++. ...+++++|||+||||||++++++.++. .+.++.++.++||
T Consensus 149 ~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~-l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg 226 (346)
T 2fsj_A 149 LTVTGPEGEVRQFNITRLIMRPQGVGAALYL-LNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGV 226 (346)
T ss_dssp EEEECGGGCEEEEEEEEEEEEETTHHHHHHH-HHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCH
T ss_pred cEEEeCCCceEEEEEEEEEEEccHHHHHHHh-hccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhH
Confidence 4 35689999999999988 322 1234789999999999999999987777 6666667789999
Q ss_pred hHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHcccccceEEEEEecCCceEEEEeCHHHH-HHHHHHHHHHHHH
Q psy15216 856 DDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNITIDMKQF-FTITQHLVNRTIL 934 (2602)
Q Consensus 856 ~~~D~~l~~~l~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~~~~~i~~~~~~~~~~~itr~~f-e~l~~~~~~~~~~ 934 (2602)
.+|++.|.+++.+++.... ... . ..+| . +..+. + .|. .++++++ +++++++++++.+
T Consensus 227 ~~i~~~I~~~i~~~~g~~~-~i~-~----~~~e-------~--~~~~~--~-~g~----~~~~~~i~~~~i~~~~~~i~~ 284 (346)
T 2fsj_A 227 GDAISALSRKIAKETGFVV-PFD-L----AQEA-------L--SHPVM--F-RQK----QVGGPEVSGPILEDLANRIIE 284 (346)
T ss_dssp HHHHHHHHHHHHHHHCCCC-CHH-H----HHHH-------T--TSCEE--E-TTE----EECSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCc-CCC-H----HHHh-------c--CCeEe--E-CCc----cCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999988775410 111 1 1122 1 11122 2 233 3569999 9999999999999
Q ss_pred HHHHHHHHcCCCccccceEEEecCccchHHHHHHHHhhccCcccC---cCCcchHhHHHHHHHh
Q psy15216 935 LSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLT---SIDPDKAVVFGAAIQA 995 (2602)
Q Consensus 935 ~i~~~l~~a~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~~~~~~---~~~p~~aVa~GAa~~a 995 (2602)
.+++.|+++ .++++.|+|+||++++ +++.|++.|+. +.. ..||++|+|+|+..++
T Consensus 285 ~i~~~l~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~ 342 (346)
T 2fsj_A 285 NIRLNLRGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAA 342 (346)
T ss_dssp HHHHHHGGG---GGGEEEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHhh---hhcccEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHH
Confidence 999999876 5678999999999999 99999999973 333 6799999999999876
No 128
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.91 E-value=3.3e-23 Score=269.79 Aligned_cols=319 Identities=13% Similarity=0.070 Sum_probs=236.1
Q ss_pred CCCHHHHHHHHHHHhhh-cCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCC-cEEEeCCHHHHHHHHHHhcccccc
Q psy15216 8 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPR-EIIWTSGATESNNLAIKGAAHFYK 83 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~-~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g--~~~~-~Iv~t~g~T~al~~~~~~l~~~~~ 83 (2602)
++++.+.+++.+.+... ..++.. ....++.+.+.+++++++| ++++ +|++|+|+++|+++++.++.
T Consensus 43 ~~~~~v~~a~~~~~~~~~~~y~~~------~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~---- 112 (386)
T 1u08_A 43 DGPRYLQERLAHHVAQGANQYAPM------TGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALV---- 112 (386)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCT------TCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHHHhhccCCCCC------CCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhC----
Confidence 46789999999988641 122211 1112233444444444457 4677 99999999999999999987
Q ss_pred cCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHhhccCCceEEEEecccCccccccc---HHHHH
Q psy15216 84 KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIG 159 (2602)
Q Consensus 84 ~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l~~I~ 159 (2602)
++||+|+++.+.|+++...++. .|++++.++.++ ++.+|+++|++++++++++|++++|+||||.++| +++|.
T Consensus 113 ~~gd~vl~~~p~~~~~~~~~~~---~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~ 189 (386)
T 1u08_A 113 RNGDEVICFDPSYDSYAPAIAL---SGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALW 189 (386)
T ss_dssp CTTCEEEEEESCCTTHHHHHHH---TTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CCCCEEEEeCCCchhHHHHHHH---cCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHH
Confidence 7999999999999998776554 499999999876 5779999999999999999999999999999997 67899
Q ss_pred HHHHhcCCEEEEeccccccc----ccccCC----CCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccc
Q psy15216 160 ELCRSKGVIFHCDAAQAVGK----IDINIQ----NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEY 229 (2602)
Q Consensus 160 ~la~~~g~~livD~a~a~g~----~~~dl~----~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~ 229 (2602)
++|++||+++|+|++|+... ....+. ..+.++++.|+||.+|++| +||+++++++++.+.+...
T Consensus 190 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~------ 263 (386)
T 1u08_A 190 QAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQ------ 263 (386)
T ss_dssp HHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHH------
T ss_pred HHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHH------
Confidence 99999999999999997522 111221 2357899999999999888 8999998877666654321
Q ss_pred cccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc---cChhHH
Q psy15216 230 GLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---IEGESL 306 (2602)
Q Consensus 230 ~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~---~~~~~~ 306 (2602)
...++.+.+...++.++|+....++++.++++.++++++.+.|.+ . ++.+..+.. ..++.+.++. .+..++
T Consensus 264 -~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~ 337 (386)
T 1u08_A 264 -YLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNE-S-RLEILPCEG---TYFLLVDYSAVSTLDDVEF 337 (386)
T ss_dssp -HHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTS-S-SCEECCCCB---SSEEEEECTTTCCSCHHHH
T ss_pred -hhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCCc---eEEEEEecCCCCCCCHHHH
Confidence 113455666666676777743456788889999999999999987 3 777764432 2344455554 345666
Q ss_pred HHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 307 LMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 307 ~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
...| +||.+++|..|... ....+++||+++ ++++++++++++|++
T Consensus 338 ~~~l~~~~gi~v~~g~~f~~~---------------~~~~~~iRis~~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 338 CQWLTQEHGVAAIPLSVFCAD---------------PFPHKLIRLCFA--KKESTLLAAAERLRQ 385 (386)
T ss_dssp HHHHHHHSCEECEEGGGGCSS---------------CCCSCEEEEECC--SCHHHHHHHHHHHTT
T ss_pred HHHHHHhCCEEEeCchHhCCC---------------CCCCCEEEEEEc--CCHHHHHHHHHHHhh
Confidence 6654 69999998766431 012378999998 489999999999874
No 129
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.91 E-value=1.4e-23 Score=273.45 Aligned_cols=317 Identities=13% Similarity=0.080 Sum_probs=232.9
Q ss_pred CCCHHHHHHHHHHHhhh-cCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC--CCCcEEEeCCHHHHHHHHHHhccccccc
Q psy15216 8 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIYA--DPREIIWTSGATESNNLAIKGAAHFYKK 84 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~-~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~--~~~~Iv~t~g~T~al~~~~~~l~~~~~~ 84 (2602)
++|+.+.+++.+.+... ..++. ......+.+.+.+++.+.+|+ ++++|++|+|+|+|+++++.++. +
T Consensus 43 ~~~~~v~~a~~~~~~~~~~~y~~------~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~----~ 112 (388)
T 1j32_A 43 NTPKHIVEAAKAALEQGKTRYGP------AAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMI----E 112 (388)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCC------TTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC----C
T ss_pred CCCHHHHHHHHHHHhcCCCCCCC------CCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhc----C
Confidence 46788999998887542 12221 111223444444444444564 66799999999999999999987 7
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC--CCccChHHHHhhccCCceEEEEecccCccccccc---HHHHH
Q psy15216 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIG 159 (2602)
Q Consensus 85 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l~~I~ 159 (2602)
+||+|+++.++|+++...+.. .|++++.++.++ ++.+|+++|++++++++++|++++|+||||.++| +++|.
T Consensus 113 ~gd~vl~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~ 189 (388)
T 1j32_A 113 PGDEVIIPAPFWVSYPEMVKL---AEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIA 189 (388)
T ss_dssp TTCEEEEESSCCTHHHHHHHH---TTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CCCEEEEcCCCChhHHHHHHH---cCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHH
Confidence 999999999999998766654 499999999875 5678999999999999999999999999999986 88999
Q ss_pred HHHHhcCCEEEEecccccccc----cccCCC-----CCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCcc
Q psy15216 160 ELCRSKGVIFHCDAAQAVGKI----DINIQN-----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHE 228 (2602)
Q Consensus 160 ~la~~~g~~livD~a~a~g~~----~~dl~~-----~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~ 228 (2602)
++|++||+++|+|++|+.... ...+.. .+.++++.|+||++|++| +||+++++++++.+.+...++
T Consensus 190 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~--- 266 (388)
T 1j32_A 190 QVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGHS--- 266 (388)
T ss_dssp HHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHHHHHTT---
T ss_pred HHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHHHHHHHHHhhc---
Confidence 999999999999999875432 111111 346899999999989888 899999887766665433211
Q ss_pred ccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc--ccChhHH
Q psy15216 229 YGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--FIEGESL 306 (2602)
Q Consensus 229 ~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~--~~~~~~~ 306 (2602)
..+++.....++.++|+....++++..+++.++++++.+.|.+ ++++.+..+... ....+.++ ..+..++
T Consensus 267 ----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~ 338 (388)
T 1j32_A 267 ----TSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNA-MPGLECPKPDGA---FYMFPSIAKTGRSSLDF 338 (388)
T ss_dssp ----TCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHT-CTTCBCCCCCBT---TEECCBCGGGTCCHHHH
T ss_pred ----ccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhh-CCCCcccCCCee---EEEEEecCCCCCCHHHH
Confidence 1234444555555666533345778888999999999999987 678776644321 22222333 2355667
Q ss_pred HHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 307 LMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 307 ~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
...| +||.+++|..|.. .+++|++++ ++++++++++++|++.
T Consensus 339 ~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~--~~~~~i~~~~~~l~~~ 383 (388)
T 1j32_A 339 CSELLDQHQVATVPGAAFGA-------------------DDCIRLSYA--TDLDTIKRGMERLEKF 383 (388)
T ss_dssp HHHHHHHHCEECEEGGGGTC-------------------TTBEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEeChhhhCC-------------------CCcEEEEec--CCHHHHHHHHHHHHHH
Confidence 6666 4999998876643 278999997 6899999999999863
No 130
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.91 E-value=1.4e-23 Score=272.69 Aligned_cols=313 Identities=17% Similarity=0.154 Sum_probs=240.1
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCC
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 1483 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd 1483 (2602)
+.++.+.+++.+.++....++.. ....++|+.+++++++++++|++|+|+|+|+..++.++. ++||
T Consensus 38 ~~~~~v~~a~~~~~~~~~~y~~~----------~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~----~~gd 103 (381)
T 1v2d_A 38 PPPPFLLEAVRRALGRQDQYAPP----------AGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLV----GPGD 103 (381)
T ss_dssp CCCHHHHHHHHHHTTTSCSCCCT----------TCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHC----CTTC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCC----------CCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhC----CCCC
Confidence 46788999999888641112211 124689999999999988899999999999999999986 7999
Q ss_pred EEEEcCCCCcchHHHHHHHHhCCcEEEEeccC---CCCCcChhHHHhhccCCceEEEEeccccccccccC---hHHHHHH
Q psy15216 1484 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPK---NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGEL 1557 (2602)
Q Consensus 1484 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~---~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l~~I~~i 1557 (2602)
+|++++++|+++...++. .|++++.++.+ +++.+|+++|++++++++++|++++|+||||.++| +++|.++
T Consensus 104 ~Vl~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~ 180 (381)
T 1v2d_A 104 EVVVLEPFFDVYLPDAFL---AGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARL 180 (381)
T ss_dssp EEEEEESCCTTHHHHHHH---TTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEEEcCCCchhHHHHHHH---cCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHH
Confidence 999999999998765544 49999999986 45779999999999999999999999999999998 8899999
Q ss_pred hhhcCCEEEEecccccCc---ccccCC--CCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCCccccCCCC
Q psy15216 1558 CRSKGVIFHCDAAQAVGK---IDINIQ--NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSG 1630 (2602)
Q Consensus 1558 a~~~gi~vivD~a~~~g~---~~~~l~--~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~g 1630 (2602)
|++||+++|+|++|+.+. .+.++. ..+.|+++.|+||.+|++| +||+++++++++.+..... ...+
T Consensus 181 ~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~-------~~~~ 253 (381)
T 1v2d_A 181 ARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQ-------WTSF 253 (381)
T ss_dssp HHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHH-------HHTS
T ss_pred HHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHh-------hccc
Confidence 999999999999997532 222222 3468999999999888778 8999998877666543221 1134
Q ss_pred CcchhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--
Q psy15216 1631 TLATHQIVGMGEAFRLA--RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI-- 1706 (2602)
Q Consensus 1631 t~~~~~~~al~~aL~~~--~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L-- 1706 (2602)
+.+.+.+.++.++|+.. ..++++.++++.++++++.+.|.+ .++.+..+.. .....+.++..+ +...+
T Consensus 254 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~---~~~~~~~~~~~~---~~~~l~~ 325 (381)
T 1v2d_A 254 SAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA--MGLRVYVPEG---TYFLMAELPGWD---AFRLVEE 325 (381)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH--TTCCEECCSB---SSEEEEECTTCC---HHHHHHH
T ss_pred CCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHH--CCCEecCCCc---ceEEEEecChHh---HHHHHHh
Confidence 56667777777888754 456788899999999999999988 4777664421 122333333222 43333
Q ss_pred CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1707 KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1707 ~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+||.+++|..|... ....+++||+++. +.+++++++++|++.
T Consensus 326 ~gi~v~~g~~~~~~---------------~~~~~~iRi~~~~--~~~~i~~~~~~l~~~ 367 (381)
T 1v2d_A 326 ARVALIPASAFYLE---------------DPPKDLFRFAFCK--TEEELHLALERLGRV 367 (381)
T ss_dssp TCEECEEGGGGCSS---------------SCCTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCEEEecchHhCCC---------------CCCCCEEEEEeCC--CHHHHHHHHHHHHHH
Confidence 79999999877541 0113799999986 899999999999873
No 131
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.91 E-value=1.9e-23 Score=277.12 Aligned_cols=325 Identities=14% Similarity=0.099 Sum_probs=243.0
Q ss_pred CCCHHHHHHHHHHHhh-h-cCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 8 PIDPRVVDKMIPYLRV-Q-FGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~-~-~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g------~~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
++++.+.+++.+.+.. . ..++.. ....++|+.++++++ +++++|++|+|+|+|+++++.++.
T Consensus 57 ~~~~~v~~a~~~~~~~~~~~~y~~~----------~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~ 126 (437)
T 3g0t_A 57 PAPQIGIETEIQKLREGVASIYPNL----------DGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVAN 126 (437)
T ss_dssp CCCHHHHHHHHHHHHHTGGGSCCCT----------TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHhCCcCcCCCCC----------CChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHh
Confidence 5789999999998874 2 223321 113456777777765 567899999999999999999874
Q ss_pred cccccCCC--EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHhhc-cCCceEEEEecccCccccccc-
Q psy15216 80 HFYKKRGK--HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKI-CSDTILVSVMLVNNEIGVIQP- 154 (2602)
Q Consensus 80 ~~~~~~gd--~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~~i-~~~tklv~i~~~~npTG~~~~- 154 (2602)
.+++|| +|+++.+.|+++...+... |++++.+++++ ++.+|+++|++++ ++++++|++++|+||||.++|
T Consensus 127 --~~~~gd~~~Vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~ 201 (437)
T 3g0t_A 127 --RTHKNREYGTLFIDPGFNLNKLQCRIL---GQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTD 201 (437)
T ss_dssp --TSCTTCSCCEEEEESCCHHHHHHHHHH---TCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCH
T ss_pred --cCCCCCccEEEEeCCCcHhHHHHHHHc---CCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCH
Confidence 025899 9999999999988877766 99999999864 4568999999999 788999999999999999998
Q ss_pred --HHHHHHHHHhcCCEEEEeccccccc----ccc--------cCCC-CCccEEEeccccccCCCC--cEEEEEecCCCC-
Q psy15216 155 --ILEIGELCRSKGVIFHCDAAQAVGK----IDI--------NIQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRT- 216 (2602)
Q Consensus 155 --l~~I~~la~~~g~~livD~a~a~g~----~~~--------dl~~-~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~- 216 (2602)
+++|+++|++||+++|+|++|+... .++ .+.. .+.++++.|+||.+|++| +||+++++++++
T Consensus 202 ~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 281 (437)
T 3g0t_A 202 EELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYER 281 (437)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHC
T ss_pred HHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhh
Confidence 6668999999999999999997522 121 2222 456799999999988777 899999887666
Q ss_pred cccceecCC----------CccccccccCcchhHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHhhccCceEEe
Q psy15216 217 RIEAQIHGG----------GHEYGLRSGTLATHQIVGMGEAFRLARIE---MKEELKRILFLQKRLYNGLMESIEEIYIN 283 (2602)
Q Consensus 217 ~l~~~~~g~----------~~~~~~~~gt~~~~~~~al~~al~~~~~~---~~~~~~~~~~l~~~l~~~L~~~~~g~~l~ 283 (2602)
.+.....+. ........++++.....++.++++....+ +++..+++.++++++.+.|.+ . ++.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~ 359 (437)
T 3g0t_A 282 EYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLD-N-GFNIV 359 (437)
T ss_dssp BCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHT-T-TEEES
T ss_pred hhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCEEe
Confidence 511100000 00011124567777788787888754434 789999999999999999988 4 88876
Q ss_pred ------CCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCC
Q psy15216 284 ------GDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT 355 (2602)
Q Consensus 284 ------~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t 355 (2602)
.++. ...+..+.++..+..++...| +||.++++..|... ..+++||+++ +.+
T Consensus 360 ~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~-----------------~~~~iRis~~-~~~ 419 (437)
T 3g0t_A 360 YDKDGNEPLA--DGFYFTVGYKGMDSSKLIEKFVRYGMCAITLKTTGSK-----------------RNEAMRICTS-LLP 419 (437)
T ss_dssp SCEETTEECC--SSSEEEEEETTCCHHHHHHHHHHTTEECEESTTTTCC-----------------CTTCEEEECS-SSC
T ss_pred ccccCCCCCc--eeEEEEEecCCCCHHHHHHHHHHcCeEEeeccccCCC-----------------CCCEEEEEEe-cCC
Confidence 2311 134455666656777787777 79999988877542 1278999998 449
Q ss_pred HHHHHHHHHHHHhh
Q psy15216 356 EKEIDFTIKLLKMK 369 (2602)
Q Consensus 356 ~edid~li~~L~~~ 369 (2602)
++++++++++|++.
T Consensus 420 ~e~i~~~~~~l~~~ 433 (437)
T 3g0t_A 420 ESQFPDLEKRLQML 433 (437)
T ss_dssp GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999863
No 132
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.91 E-value=1.4e-23 Score=274.08 Aligned_cols=321 Identities=15% Similarity=0.127 Sum_probs=243.5
Q ss_pred CCCCCHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1402 TTPIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g--~~~~~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
..+.++.+.+++.+.+... .+++.. ..++.+++++.+++.+| +++++|++|+|+|+|+++++.++.
T Consensus 38 ~~~~~~~v~~a~~~~~~~~~~~y~~~--------~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~--- 106 (391)
T 3dzz_A 38 DFKIAPEIMASMEEKLKVAAFGYESV--------PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFT--- 106 (391)
T ss_dssp SSCCCHHHHHHHHHHHTTCCCCCBCC--------CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHS---
T ss_pred CCCCCHHHHHHHHHHHhcCcCCCCCC--------CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhC---
Confidence 3467889999999988652 222211 24567778888888888 678899999999999999999986
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC---CCCcChhHHHhhcc-CCceEEEEeccccccccccC---h
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN---NGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQP---I 1551 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~---~~~id~d~l~~~i~-~~t~lv~l~~~~n~tG~~~~---l 1551 (2602)
++||+|+++.++|+++...+... |++++.++.++ ++.+|+++|+++++ +++++|++++|+||||.++| +
T Consensus 107 -~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l 182 (391)
T 3dzz_A 107 -SPGDQILVQEPVYNMFYSVIEGN---GRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEV 182 (391)
T ss_dssp -CTTCEEEECSSCCHHHHHHHHHT---TCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHH
T ss_pred -CCCCeEEECCCCcHHHHHHHHHc---CCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHH
Confidence 89999999999999987766554 99999998852 23489999999998 79999999999999999954 8
Q ss_pred HHHHHHhhhcCCEEEEecccccCc----ccccCCCCC---cc--EEEEccccccCCCc--eEEEEEe-cCCCCccccccc
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGK----IDINIQNYK---VD--LMSFSAHKIYGPKG--IGALYIR-RNPRTRIEAQIH 1619 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~----~~~~l~~~~---~D--~~v~S~~K~~gp~G--~G~l~~~-~~~~~~l~~~~~ 1619 (2602)
++|.++|++||+++|+|++|+... .+.++..+. .| +++.|+||.+|++| +|+++++ +++.+.+.....
T Consensus 183 ~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 262 (391)
T 3dzz_A 183 KRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFF 262 (391)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHH
Confidence 889999999999999999997432 223333332 55 88999999777666 8999987 655555543321
Q ss_pred cCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--C
Q psy15216 1620 GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--I 1697 (2602)
Q Consensus 1620 g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--~ 1697 (2602)
....++++...+.++.+++......+++..+++.++++++.+.|.+.++++.+..+... ....+.++. .
T Consensus 263 ------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 333 (391)
T 3dzz_A 263 ------LAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNAS---YLAWVDISALGM 333 (391)
T ss_dssp ------HHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBS---SEEEEECGGGCS
T ss_pred ------hhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCce---EEEEEehhhcCC
Confidence 11234567777777777777545567888899999999999999875678877644322 223344543 3
Q ss_pred CcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1698 EGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1698 ~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+..++...| +||.+++|..|... ..+++|++++ ++.+++++++++|++.
T Consensus 334 ~~~~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRis~~--~~~~~i~~~l~~l~~~ 385 (391)
T 3dzz_A 334 NAEDFCKYLREKTGLIISAGNGYRGN-----------------GHEFVRINLA--CPKELVIDGMQRLKQG 385 (391)
T ss_dssp CHHHHHHHHHHHHCEECEESGGGCTT-----------------GGGEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCEEEeCchhhCCC-----------------CCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 556666655 59999999887643 1389999998 6899999999999973
No 133
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.91 E-value=3.7e-23 Score=268.29 Aligned_cols=336 Identities=12% Similarity=0.080 Sum_probs=235.7
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccC
Q psy15216 1402 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 1481 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~ 1481 (2602)
..+.++.+++++.+.++..+.+|+ ....++|+.+++++|.+ ++++|+|+|+|++.++.++.. .+++
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~-----------~~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~~~~-~~~~ 73 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNSKQLTQG-----------KRSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSE-FSAD 73 (375)
T ss_dssp CCCCCHHHHHHHHHHHTSSCCSSS-----------HHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSC-CCTT
T ss_pred CCCCCHHHHHHHHHHHHcCcccCC-----------hHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhcc-cCCC
Confidence 457788999999999875433332 24678999999999976 899999999999999999820 0279
Q ss_pred CCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhc
Q psy15216 1482 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK 1561 (2602)
Q Consensus 1482 gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~ 1561 (2602)
||+|++++++|+++...+... |++++.++.++++.+|+++|+++++++|++|+++|+ ||.+.|+++|.++|++|
T Consensus 74 gd~Vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~~l~~~~ 147 (375)
T 2fnu_A 74 RNEIITTPISFVATANMLLES---GYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCKKH 147 (375)
T ss_dssp SCEEEECSSSCTHHHHHHHHT---TCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHHHH
T ss_pred CCEEEECCCccHhHHHHHHHC---CCEEEEeccCCCCCCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHHHHHHHc
Confidence 999999999999998877654 999999999887789999999999999999988887 99999999999999999
Q ss_pred CCEEEEecccccCccccc--CCCCCccEEEEccc--cccCCCceEEEEEe--cCCCCccccccccCCc---cccCC---C
Q psy15216 1562 GVIFHCDAAQAVGKIDIN--IQNYKVDLMSFSAH--KIYGPKGIGALYIR--RNPRTRIEAQIHGGGH---EYGLR---S 1629 (2602)
Q Consensus 1562 gi~vivD~a~~~g~~~~~--l~~~~~D~~v~S~~--K~~gp~G~G~l~~~--~~~~~~l~~~~~g~~~---~~~~~---~ 1629 (2602)
|+++|+|++|+.+..+.. +..++ |++++|++ |++|+ |+|+++++ +++.+.+.+...++.. +..+. .
T Consensus 148 ~~~li~D~a~~~~~~~~~~~~~~~~-~i~~~s~s~~K~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (375)
T 2fnu_A 148 SLSFLSDSSHALGSEYQNKKVGGFA-LASVFSFHAIKPITT-AEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSI 225 (375)
T ss_dssp TCEEEEECTTCTTCEETTEETTSSS-SEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSC
T ss_pred CCEEEEECccccCCeECCeeccccC-CeEEEeCCCCCCccc-cCceEEEeCCHHHHHHHHHHHhcCCccccccccccccc
Confidence 999999999998865432 33333 55655555 98888 89999985 3355555544332221 11111 1
Q ss_pred CCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC--CCCCCceEEEEEecC---CcHHHH
Q psy15216 1630 GTL-ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDM--NNRIPHNLNISFNFI---EGESLL 1703 (2602)
Q Consensus 1630 gt~-~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~--~~~~~~~~~~~~~~~---~~~~~~ 1703 (2602)
+.. ....+.+. .++. ...++++..++..++++++.+.|.+ ++++.+..++ ....+....+.++.. +..++.
T Consensus 226 ~~~~~~~~~~~a-~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 302 (375)
T 2fnu_A 226 GHNFRLNEIQSA-LGLS-QLKKAPFLMQKREEAALTYDRIFKD-NPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLIL 302 (375)
T ss_dssp CCBCCCCHHHHH-HHHH-HHTTHHHHHHHHHHHHHHHHHHHTT-CSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHH
T ss_pred cccCCCCHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCCCCcceEEEEEEeCccccchHHHHH
Confidence 111 12222211 1221 1245678888999999999999988 7888887542 122334445666542 456676
Q ss_pred Hhc--CCEEEccccccCCCCCChhHHHHHcC---C--CccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1704 MAI--KDIAVSSGSACTSASLEPSYVLRALG---C--NDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1704 ~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~---~--~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
..| +||.++. .|.+.+..+.+.. .+. . ......+++||+++.++|.+|+++++++|++.
T Consensus 303 ~~L~~~gi~v~~--~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 368 (375)
T 2fnu_A 303 ESLHKRGILAQV--HYKPIYQYQLYQQ-LFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKT 368 (375)
T ss_dssp HHHHHTTEECBC--CCCCGGGSHHHHH-HHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCccc--cccccccchhhhc-CCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 666 7999873 3332211111110 000 0 00112368999999999999999999999973
No 134
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.91 E-value=5.6e-23 Score=265.77 Aligned_cols=302 Identities=13% Similarity=0.076 Sum_probs=232.5
Q ss_pred CCCHHHHHHHHHHHhhh----cCCCCCCCcchhhhHHHHHHHHHHHHHHH------hCCCCCcEEEeCCHHHHHHHHHHh
Q psy15216 8 PIDPRVVDKMIPYLRVQ----FGNPASRNHIYGWTAEKAIEKARNEVAQL------IYADPREIIWTSGATESNNLAIKG 77 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~----~~~p~~~~~~~~~~~~~~~~~~r~~lA~~------~g~~~~~Iv~t~g~T~al~~~~~~ 77 (2602)
++++.+.+++.+.+... ..++.. . ..++|++++++ +++++++|++++|+++++++++.+
T Consensus 43 ~~~~~v~~a~~~~~~~~~~~~~~y~~~------~-----~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~ 111 (369)
T 3cq5_A 43 PPSEALVADLVATVDKIATELNRYPER------D-----AVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQA 111 (369)
T ss_dssp CCCHHHHHHHHHHHHHHGGGTTSCCCT------T-----CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcccccccCCCc------c-----HHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHH
Confidence 57889999999988652 122211 0 13566666666 455778999999999999999999
Q ss_pred cccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCcccccccHH
Q psy15216 78 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPIL 156 (2602)
Q Consensus 78 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l~ 156 (2602)
+. ++||+|+++.++|+++...+.. .|++++.++.++++.+|++++++++++ ++++|++++|+||||.++|++
T Consensus 112 l~----~~gd~Vl~~~~~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~ 184 (369)
T 3cq5_A 112 FG----GPGRTALGFQPSYSMHPILAKG---THTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD 184 (369)
T ss_dssp HC----STTCEEEEEESSCTHHHHHHHH---TTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred hc----CCCCEEEEcCCChHHHHHHHHH---cCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 87 7999999999999998776554 499999999887778999999999987 899999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeccccccccc---ccC-CCCC-ccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccc
Q psy15216 157 EIGELCRSKGVIFHCDAAQAVGKID---INI-QNYK-VDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEY 229 (2602)
Q Consensus 157 ~I~~la~~~g~~livD~a~a~g~~~---~dl-~~~~-~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~ 229 (2602)
++.++++.+++++|+|++|+.+... ..+ ...+ .++++.|+||.+|++| +||+++++++++.+.+..
T Consensus 185 ~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~------- 257 (369)
T 3cq5_A 185 DVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVR------- 257 (369)
T ss_dssp HHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTS-------
T ss_pred HHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcC-------
Confidence 9999999999999999999866532 222 2344 5699999999888777 799999987666554332
Q ss_pred cccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHH
Q psy15216 230 GLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMA 309 (2602)
Q Consensus 230 ~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (2602)
..++++.....++.++++. ..++++..+++.++++++.+.|.+ +++.+..+ . ..++.+.++ .+..++...
T Consensus 258 --~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~-~---~~~~~~~~~-~~~~~l~~~ 327 (369)
T 3cq5_A 258 --LPYHLSALSQAAAIVALRH-SADTLGTVEKLSVERVRVAARLEE--LGYAVVPS-E---SNFVFFGDF-SDQHAAWQA 327 (369)
T ss_dssp --CTTCSCHHHHHHHHHHHHT-HHHHHTHHHHHHHHHHHHHHHHHH--HTCEEECC-S---SSEEEEECC-SSHHHHHHH
T ss_pred --CCCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHh--CCCEECCC-C---CeEEEEECC-CCHHHHHHH
Confidence 1235677777777777764 245678888999999999999987 47777632 2 233344444 456667666
Q ss_pred h--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 310 I--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 310 L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
| +||.++++. . ++++||+++ +++|+++++++|++.
T Consensus 328 l~~~gi~v~~~~---~-------------------~~~iRis~~---~~~~i~~~~~~l~~~ 364 (369)
T 3cq5_A 328 FLDRGVLIRDVG---I-------------------AGHLRTTIG---VPEENDAFLDAAAEI 364 (369)
T ss_dssp HHHTTEECBCCS---C-------------------TTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred HHHCCEEEEECC---C-------------------CCeEEEEeC---CHHHHHHHHHHHHHH
Confidence 6 799998761 1 278999998 899999999999864
No 135
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.91 E-value=3e-23 Score=272.52 Aligned_cols=328 Identities=15% Similarity=0.104 Sum_probs=237.0
Q ss_pred CCCHHHHHHHHHHHhhh-cCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC--CCC-cEEEeCCHHHHHHHHHHhcccccc
Q psy15216 8 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIYA--DPR-EIIWTSGATESNNLAIKGAAHFYK 83 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~-~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~--~~~-~Iv~t~g~T~al~~~~~~l~~~~~ 83 (2602)
++++.+.+++.+.+... ..++.. .....+.+.+.+++.+.+|. +++ +|++|+|+++|+.+++.++.
T Consensus 38 ~~~~~v~~a~~~~~~~~~~~y~~~------~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~---- 107 (411)
T 2o0r_A 38 DGPPKMLQAAQDAIAGGVNQYPPG------PGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLV---- 107 (411)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCT------TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCC------CCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhc----
Confidence 56789999999988651 222211 11123334444444444474 577 99999999999999999987
Q ss_pred cCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC---CCccChHHHHhhccCCceEEEEecccCcccccccH---HH
Q psy15216 84 KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN---NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI---LE 157 (2602)
Q Consensus 84 ~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~---~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l---~~ 157 (2602)
++||+|+++.++|+++...+.. .|++++.++.++ ++.+|+++|++++++++++|++++|+||||.++|. ++
T Consensus 108 ~~gd~Vl~~~~~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~ 184 (411)
T 2o0r_A 108 EPGSEVLLIEPFYDSYSPVVAM---AGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAA 184 (411)
T ss_dssp CTTCEEEEEESCCTTHHHHHHH---TTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCCCEEEEeCCCcHhHHHHHHH---cCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHH
Confidence 7999999999999998766554 499999998765 35689999999999999999999999999999885 88
Q ss_pred HHHHHHhcCCEEEEecccccccc----cccCC---C-CCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCc
Q psy15216 158 IGELCRSKGVIFHCDAAQAVGKI----DINIQ---N-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGH 227 (2602)
Q Consensus 158 I~~la~~~g~~livD~a~a~g~~----~~dl~---~-~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~ 227 (2602)
|.++|++||+++|+|++|+.+.. +..+. . .+.|+++.|+||.+|++| +||+++++++++.+.+...
T Consensus 185 i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~---- 260 (411)
T 2o0r_A 185 IAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQ---- 260 (411)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHH----
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHh----
Confidence 99999999999999999986432 12221 1 467899999999999888 8999998877666654321
Q ss_pred cccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc---cChh
Q psy15216 228 EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---IEGE 304 (2602)
Q Consensus 228 ~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~---~~~~ 304 (2602)
...++.+.+...++.++|+....++++..+++.++++++.+.|.+ . ++.+..+.. +.++.+.++. .+..
T Consensus 261 ---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---g~~~~~~~~~~~~~~~~ 332 (411)
T 2o0r_A 261 ---YLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTE-I-GFAVHDSYG---TYFLCADPRPLGYDDST 332 (411)
T ss_dssp ---HHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-H-TCEECCCCB---SSEEEEECGGGTCCCHH
T ss_pred ---hccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH-c-CCEecCCCe---eEEEEEecCCCCCCCHH
Confidence 112345556666666777744556788899999999999999987 3 777764432 2344555554 3455
Q ss_pred HHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 305 SLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 305 ~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
++...| +||.+++|..|.+....+++.+. + ...+++||+++ ++++++++++++|++
T Consensus 333 ~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~--~----~~~~~iRis~~--~~~e~i~~~~~~l~~ 391 (411)
T 2o0r_A 333 EFCAALPEKVGVAAIPMSAFCDPAAGQASQQA--D----VWNHLVRFTFC--KRDDTLDEAIRRLSV 391 (411)
T ss_dssp HHHHHHHHHHSEECEEGGGGSCCC----------C----CGGGCEEEECC--SCHHHHHHHHHHHGG
T ss_pred HHHHHHHHhCCEEEcChhhhCCCccccccccc--c----CCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 666655 59999999877432111111111 0 01378999997 489999999999986
No 136
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.91 E-value=2.2e-23 Score=270.70 Aligned_cols=312 Identities=12% Similarity=0.096 Sum_probs=236.0
Q ss_pred CCCHHHHHHHHHHHhh-hcCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 8 PIDPRVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~-~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g------~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
++++.+.+++.+.+.. ...++.. . .++|+.++++++ +++++|++|+|+++|++.++.++.
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~y~~~-----------~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~- 102 (377)
T 3fdb_A 36 STCPAVLQAITDAVQREAFGYQPD-----------G-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFT- 102 (377)
T ss_dssp CCCHHHHHHHHHHHHTTCCSSCCS-----------S-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-
T ss_pred CCCHHHHHHHHHHHHcCCCCCCCC-----------C-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhc-
Confidence 6789999999998875 2222211 1 345566666655 677899999999999999999987
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCccccccc---HHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILE 157 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l~~ 157 (2602)
++||+|+++.+.|+++...+... |++++.++.+++ +|+++|+++++++++++++++|+||||.++| +++
T Consensus 103 ---~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~--~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~ 174 (377)
T 3fdb_A 103 ---PAQSKVIVPTPAYPPFFHLLSAT---QREGIFIDATGG--INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNE 174 (377)
T ss_dssp ---CTTCCEEEEESCCTHHHHHHHHH---TCCEEEEECTTS--CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHH
T ss_pred ---CCCCEEEEcCCCcHhHHHHHHHc---CCEEEEccCCCC--CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 89999999999999988777666 999999998776 9999999999999999999999999999997 556
Q ss_pred HHHHHHhcCCEEEEeccccccc-----ccccCCC---CCccEEEeccccccCCCC--cEEEEE-ecCCCCcccceecCCC
Q psy15216 158 IGELCRSKGVIFHCDAAQAVGK-----IDINIQN---YKVDLMSFSAHKIYGPKG--IGALYI-RRNPRTRIEAQIHGGG 226 (2602)
Q Consensus 158 I~~la~~~g~~livD~a~a~g~-----~~~dl~~---~~~D~~~~S~~K~~Gp~G--~G~l~~-~~~~~~~l~~~~~g~~ 226 (2602)
|+++|++||+++|+|++|+... .+.++.. .+.++++.|+||.+|++| +||+++ ++++++.+....
T Consensus 175 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~---- 250 (377)
T 3fdb_A 175 LCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLS---- 250 (377)
T ss_dssp HHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSC----
T ss_pred HHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHH----
Confidence 7777999999999999997632 2223322 234588999999888777 798877 555555554322
Q ss_pred ccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEccc-ChhH
Q psy15216 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-EGES 305 (2602)
Q Consensus 227 ~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~-~~~~ 305 (2602)
....++++.++..++.++++....++++..+++.++++++.+.|.+.+|++.+..+... ...++.++.. ...+
T Consensus 251 ---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 324 (377)
T 3fdb_A 251 ---PVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQAT---YLMWIDFRDTTIEGS 324 (377)
T ss_dssp ---HHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBC---SEEEEECTTSCCCSC
T ss_pred ---HhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCee---EEEEEECcccCCCHH
Confidence 11235677777777777887545667888999999999999999875678888755432 2334555542 2244
Q ss_pred HHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 306 LLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 306 ~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+...+ +||.+++|..|... ..+++||+++ ++++++++++++|++.
T Consensus 325 ~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~~Ris~~--~~~e~i~~~l~~l~~~ 372 (377)
T 3fdb_A 325 PSEFFIEKAKVAMNDGAWFGED-----------------GTGFCRLNFA--TSREVLEEAIDRMAKA 372 (377)
T ss_dssp HHHHHHHHHCEECEEGGGGCGG-----------------GTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEecCChhccCC-----------------CCCEEEEEeC--CCHHHHHHHHHHHHHH
Confidence 55444 49999999887642 1389999998 4899999999999863
No 137
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.91 E-value=1.3e-22 Score=267.56 Aligned_cols=317 Identities=14% Similarity=0.149 Sum_probs=242.3
Q ss_pred CCCHHHHHHHHHHHhhh-cCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCC
Q psy15216 8 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~-~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~g 86 (2602)
.+++.+.+++.+.+... .+++. +.......+...++++++++++|++ +.++++|+++|+..++.++. ++|
T Consensus 78 ~~~~~v~~a~~~~~~~~~~~~~~---~~~~~G~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~al~~l~----~~g 148 (427)
T 2w8t_A 78 TFDPDVIAAGKEALEKFGSGTCG---SRMLNGTFHDHMEVEQALRDFYGTT--GAIVFSTGYMANLGIISTLA----GKG 148 (427)
T ss_dssp GGCHHHHHHHHHHHHHHCSCCCS---CTTTTCCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHS----CTT
T ss_pred CCCHHHHHHHHHHHHHhCCCCcc---cccccCCcHHHHHHHHHHHHHhCCC--ceEEecCcHHHHHHHHHHhc----CCC
Confidence 36789999999988762 12221 1222222356789999999999975 56677777889999988876 899
Q ss_pred CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC----CceEEEEecccCcccccccHHHHHHHH
Q psy15216 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS----DTILVSVMLVNNEIGVIQPILEIGELC 162 (2602)
Q Consensus 87 d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~----~tklv~i~~~~npTG~~~~l~~I~~la 162 (2602)
|.|+++.+.|+++...+... |++++.++. +|+++|++++++ ++++|++++++||||.+.|+++|.++|
T Consensus 149 d~vl~~~~~h~~~~~~~~~~---g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~ 220 (427)
T 2w8t_A 149 EYVILDADSHASIYDGCQQG---NAEIVRFRH-----NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVA 220 (427)
T ss_dssp CEEEEETTCCHHHHHHHHHS---CSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHH
T ss_pred CEEEECCcccHHHHHHHHHc---CCeeEEeCC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHH
Confidence 99999999999988777654 899988873 589999999976 789999999999999999999999999
Q ss_pred HhcCCEEEEeccccccccc---------ccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCccccccc
Q psy15216 163 RSKGVIFHCDAAQAVGKID---------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRS 233 (2602)
Q Consensus 163 ~~~g~~livD~a~a~g~~~---------~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 233 (2602)
++||+++|+|++|+.+... +++. .++|++++|+||++|++| ||+++++++++.+.+.... ....
T Consensus 221 ~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~-~~~di~~~s~sK~~g~~g-G~v~~~~~l~~~l~~~~~~-----~~~~ 293 (427)
T 2w8t_A 221 KKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLE-GQIDFVVGTFSKSVGTVG-GFVVSNHPKFEAVRLACRP-----YIFT 293 (427)
T ss_dssp HHTTCEEEEECTTTTTTSSTTSCCHHHHTTCT-TCCSEEEEESSSTTCSCC-EEEEECCTTGGGGGGTCHH-----HHSS
T ss_pred HHcCCEEEEECCccccccCCCCCchHhhcCCC-cCCcEEEecchhhhccCC-CEEEeCHHHHHHHHHhccc-----cccc
Confidence 9999999999999876543 3332 357999999999889988 9999999888877643210 0123
Q ss_pred cCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc-cChhHHHHHh--
Q psy15216 234 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI-- 310 (2602)
Q Consensus 234 gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~L-- 310 (2602)
++++..+++++.++++... ..++.++++.++++++.+.|.+ . ++.+..++ .. ..++.+.++. .+..++...|
T Consensus 294 ~~~~~~~~aa~~~al~~~~-~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~~L~~ 368 (427)
T 2w8t_A 294 ASLPPSVVATATTSIRKLM-TAHEKRERLWSNARALHGGLKA-M-GFRLGTET-CD-SAIVAVMLEDQEQAAMMWQALLD 368 (427)
T ss_dssp CCCCHHHHHHHHHHHHHHT-SCHHHHHHHHHHHHHHHHHHHH-H-TCEESCSS-CC-SSEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHH-c-CCcccCCC-CC-CCEEEEEECCHHHHHHHHHHHHH
Confidence 5677777777778887643 3578889999999999999988 3 77776333 11 2344455543 2345666666
Q ss_pred CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 311 KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 311 ~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+||.++++..+..+ ...+++|++++.+++++|+++++++|++.
T Consensus 369 ~Gi~v~~~~~~~~~----------------~~~~~lRi~~~~~~t~e~i~~~~~~l~~~ 411 (427)
T 2w8t_A 369 GGLYVNMARPPATP----------------AGTFLLRCSICAEHTPAQIQTVLGMFQAA 411 (427)
T ss_dssp TTEECEEECTTTSC----------------TTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCeEEeeeCCCCCC----------------CCCeEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 79999987655322 11368999999999999999999999964
No 138
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.91 E-value=5.1e-23 Score=265.66 Aligned_cols=306 Identities=14% Similarity=0.096 Sum_probs=234.2
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
++++.+.+++.+.+.....++.. ...++|+++++++|+++++|++|+|+++++++++.++ +||
T Consensus 37 ~~~~~v~~a~~~~~~~~~~y~~~-----------~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~------~gd 99 (364)
T 1lc5_A 37 GMPVSVKRALIDNLDCIERYPDA-----------DYFHLHQALARHHQVPASWILAGNGETESIFTVASGL------KPR 99 (364)
T ss_dssp CCCHHHHHHHHHTGGGGGSCCCT-----------TCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH------CCS
T ss_pred CCCHHHHHHHHHHHHHhhcCCCC-----------CHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc------CCC
Confidence 46789999998887653333321 2467899999999998889999999999999999876 469
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccC-hHHHHhhccCCceEEEEecccCccccccc---HHHHHHHHH
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLIT-LSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELCR 163 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld-~e~l~~~i~~~tklv~i~~~~npTG~~~~---l~~I~~la~ 163 (2602)
+|+++.+.|+++...+... |++++.++.++...++ ++++.+.++++++++++++|+||||.++| +++|.++|+
T Consensus 100 ~vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 176 (364)
T 1lc5_A 100 RAMIVTPGFAEYGRALAQS---GCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCK 176 (364)
T ss_dssp EEEEEESCCTHHHHHHHHT---TCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred eEEEeCCCcHHHHHHHHHc---CCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhh
Confidence 9999999999987766554 9999999987522233 57677777788999999999999999999 889999999
Q ss_pred hcCCEEEEecccccccc----cccC-CCCCccEEEeccccccCCCC--cEEEE-EecCCCCcccceecCCCccccccccC
Q psy15216 164 SKGVIFHCDAAQAVGKI----DINI-QNYKVDLMSFSAHKIYGPKG--IGALY-IRRNPRTRIEAQIHGGGHEYGLRSGT 235 (2602)
Q Consensus 164 ~~g~~livD~a~a~g~~----~~dl-~~~~~D~~~~S~~K~~Gp~G--~G~l~-~~~~~~~~l~~~~~g~~~~~~~~~gt 235 (2602)
+||+++|+|++|+.+.. .++. ...+.++++.|+||.+|++| +||++ .++++++.+.+.. ..++
T Consensus 177 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~---------~~~~ 247 (364)
T 1lc5_A 177 SLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQ---------MPWS 247 (364)
T ss_dssp HHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHS---------CTTC
T ss_pred hcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhC---------CCCC
Confidence 99999999999975432 1232 33567899999999988777 69999 8887776665433 1345
Q ss_pred cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCe
Q psy15216 236 LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDI 313 (2602)
Q Consensus 236 ~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI 313 (2602)
++.....++.++++. ..++++..+++.++++++.+.|.+ +|++.+..+. ..++.+.++. +..++...| +||
T Consensus 248 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~----g~~~~~~~~~-~~~~l~~~l~~~gi 320 (364)
T 1lc5_A 248 VNALAALAGEVALQD-SAWQQATWHWLREEGARFYQALCQ-LPLLTVYPGR----ANYLLLRCER-EDIDLQRRLLTQRI 320 (364)
T ss_dssp SCHHHHHHHHHGGGC-HHHHHHHHHHHHHHHHHHHHHHHT-STTEEECCCS----SSEEEEEESC-TTCCHHHHHHTTTE
T ss_pred CCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHhc-CCCCEECCCC----CeEEEEECCC-cHHHHHHHHHHCCc
Confidence 677777777677764 346788888899999999999987 6788876322 2233444443 244566666 799
Q ss_pred EEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 314 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 314 ~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.+++|..|... ..+++||+++ +.+|+++++++|++.
T Consensus 321 ~v~~g~~~~~~-----------------~~~~iRis~~---~~~~~~~l~~~l~~~ 356 (364)
T 1lc5_A 321 LIRSCANYPGL-----------------DSRYYRVAIR---SAAQNERLLAALRNV 356 (364)
T ss_dssp ECEECTTSTTC-----------------CTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred EEeeCcccCCC-----------------CCCEEEEEeC---CHHHHHHHHHHHHHH
Confidence 99998776421 1379999986 789999999999863
No 139
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.91 E-value=9.8e-24 Score=276.64 Aligned_cols=314 Identities=13% Similarity=0.126 Sum_probs=234.5
Q ss_pred CCCHHHHHHHHHHHhhhc-CCCCCCCcchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 8 PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLI------YADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~-~~p~~~~~~~~~~~~~~~~~~r~~lA~~~------g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
+.|+.+.+++.+.+.... .++.. ....++|+.+++++ ++++++|++|+|+++|+.+++.++.
T Consensus 54 ~~~~~v~~a~~~~~~~~~~~y~~~----------~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~- 122 (406)
T 1xi9_A 54 QPPEHMKEAYCKAIKEGHNYYGDS----------EGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALL- 122 (406)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCT----------TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCC----------CCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhC-
Confidence 567899999988886422 12111 11345566666665 4567899999999999999999986
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC--CCccChHHHHhhccCCceEEEEecccCccccccc---H
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l 155 (2602)
++||+|+++.++|+++...+.. .|++++.++.++ ++.+|+++|++++++++++|++++|+||||.++| +
T Consensus 123 ---~~gd~Vl~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l 196 (406)
T 1xi9_A 123 ---DPGDEILVPGPSYPPYTGLVKF---YGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTL 196 (406)
T ss_dssp ---CTTCEEEEEESCCHHHHHHHHH---TTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred ---CCCCEEEEcCCCCccHHHHHHH---cCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHH
Confidence 7999999999999997766654 499999998864 4568999999999999999999999999999987 8
Q ss_pred HHHHHHHHhcCCEEEEecccccccc---cccCCC--CCc-cEEEeccccccCCCC--cEEEE--Eec----CCCCcccce
Q psy15216 156 LEIGELCRSKGVIFHCDAAQAVGKI---DINIQN--YKV-DLMSFSAHKIYGPKG--IGALY--IRR----NPRTRIEAQ 221 (2602)
Q Consensus 156 ~~I~~la~~~g~~livD~a~a~g~~---~~dl~~--~~~-D~~~~S~~K~~Gp~G--~G~l~--~~~----~~~~~l~~~ 221 (2602)
++|.++|++||+++|+|++|+.+.. +..+.. .+. +++++|+||++|++| +||++ .++ ++++.+...
T Consensus 197 ~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~ 276 (406)
T 1xi9_A 197 EEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRL 276 (406)
T ss_dssp HHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHH
Confidence 8999999999999999999976432 112211 345 789999999988888 89999 776 555555432
Q ss_pred ecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc--
Q psy15216 222 IHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-- 299 (2602)
Q Consensus 222 ~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~-- 299 (2602)
.. .. ++++.....++.++|+....++++..+++.++++++.+.|.+ +|++.+..+.. +...++.++
T Consensus 277 ~~-------~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~---~~~~~~~~~~~ 344 (406)
T 1xi9_A 277 AR-------IR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNE-IPGISTTKPQG---AFYIFPKIEVG 344 (406)
T ss_dssp HH-------HT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHT-STTEECCCCCB---SSEECCEECSC
T ss_pred HH-------hh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh-CCCCeeecCCe---eEEEEEecCcc
Confidence 21 11 456667777777777522334678888999999999999987 67887764432 222333454
Q ss_pred -ccChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 300 -FIEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 300 -~~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..+..++...| +||.+++|..|... ..+++||+++ ++++++++++++|++.
T Consensus 345 ~~~~~~~l~~~l~~~~gi~v~~g~~f~~~-----------------~~~~lRis~~--~~~~~i~~~~~~l~~~ 399 (406)
T 1xi9_A 345 PWKNDKEFVLDVLHNAHVLFVHGSGFGEY-----------------GAGHFRAVFL--PPIEILEEAMDRFEKF 399 (406)
T ss_dssp SCSSHHHHHHHHHHHHCEECEEGGGGCGG-----------------GTTBEEEECC--SCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhcCCC-----------------CCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 24566666655 59999988766421 1378999998 7999999999999864
No 140
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.91 E-value=8.7e-23 Score=274.82 Aligned_cols=331 Identities=16% Similarity=0.123 Sum_probs=249.1
Q ss_pred CCCHHHHHHHHHHHhhhcC-CCCCCCcchhhhHHHHHHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHhcccccc-
Q psy15216 8 PIDPRVVDKMIPYLRVQFG-NPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PREIIWTSGATESNNLAIKGAAHFYK- 83 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~-~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~--~~~Iv~t~g~T~al~~~~~~l~~~~~- 83 (2602)
+.++.+.+++.+.+..... ++.. +........+.+++++++++++|++ ++++++++|+|+|+.+++.++.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~ 152 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLH--PDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALH 152 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTC--TTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhhcCCCC--cccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHh
Confidence 4457788888887765322 2221 2223345567788999999999997 67899999999999999999862100
Q ss_pred cCC---CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHhhccCCceEEEEecccCcccccccHHHHH
Q psy15216 84 KRG---KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIG 159 (2602)
Q Consensus 84 ~~g---d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~ 159 (2602)
.+| |+|+++.+.|+++...+... |++++.+++++ ++.+|+++|+++++++|++|++++|+||||.+.|+++|.
T Consensus 153 ~~g~~~~~Vi~~~~~h~~~~~~~~~~---G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~ 229 (497)
T 3mc6_A 153 HRGITEPEIIAPVTAHAGFDKAAYYF---GMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLG 229 (497)
T ss_dssp HSCCSSCEEEEETTSCHHHHHHHHHS---CCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTT
T ss_pred cCCCCCceEEEeCCccHHHHHHHHHc---CCeEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHH
Confidence 145 89999999999988777765 99999999987 788999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecccccccc------------cccCCCCCccEEEeccccc-cCCCCcEEEEEecCCCCcc----ccee
Q psy15216 160 ELCRSKGVIFHCDAAQAVGKI------------DINIQNYKVDLMSFSAHKI-YGPKGIGALYIRRNPRTRI----EAQI 222 (2602)
Q Consensus 160 ~la~~~g~~livD~a~a~g~~------------~~dl~~~~~D~~~~S~~K~-~Gp~G~G~l~~~~~~~~~l----~~~~ 222 (2602)
++|++||+++|+|++|+.+.. +++....++|++++|+||+ +||.|+|+++++++..... .+.+
T Consensus 230 ~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~ 309 (497)
T 3mc6_A 230 KIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAW 309 (497)
T ss_dssp THHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTC
T ss_pred HHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccc
Confidence 999999999999999974332 3555667899999999995 6888999999987543322 1222
Q ss_pred cCCCccccccccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEccc
Q psy15216 223 HGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI 301 (2602)
Q Consensus 223 ~g~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~ 301 (2602)
.++........|+.+...++++.++++. ...++++..++..++++++++.|.+.+++++++.++. ...+.+..+..
T Consensus 310 ~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~---~~~v~~~~~~~ 386 (497)
T 3mc6_A 310 TGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPR---YSVISFSSKTL 386 (497)
T ss_dssp TTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCC---SSEEEEECTTT
T ss_pred cCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCC---eeEEEEeCCCC
Confidence 1211111122345555667777788874 3456788999999999999999987458998876532 23344444445
Q ss_pred ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 302 EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 302 ~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+..++.+.| +||.++.+.. ...+|+++. .++.+++++++++|++.
T Consensus 387 ~~~~l~~~L~~~Gi~v~~~~~----------------------~~~~ri~~~-~~t~e~i~~~~~~L~~~ 433 (497)
T 3mc6_A 387 NIHELSDRLSKKGWHFNALQK----------------------PVALHMAFT-RLSAHVVDEICDILRTT 433 (497)
T ss_dssp THHHHHHHHHTTTCBCEECCS----------------------SCCEEEECC-TTTTCTHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCEEEecCCC----------------------CCeEEEEEe-CCCHHHHHHHHHHHHHH
Confidence 677777777 6887764321 145899988 67999999999999964
No 141
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.91 E-value=1.7e-23 Score=272.25 Aligned_cols=321 Identities=13% Similarity=0.120 Sum_probs=242.0
Q ss_pred CCCCCHHHHHHHHHHHhh-ccCCCCCccchhHHHHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1402 TTPIDPRVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~-~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g--~~~~~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
..+.++.+.+++.+.+.. ...++.. ..+..+++++.+++.+| +++++|++|+|+|+|++.++.++.
T Consensus 35 ~~~~~~~v~~a~~~~~~~~~~~y~~~--------~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~--- 103 (383)
T 3kax_A 35 DFEVPQPIQTALKKRIEHPIFGYTLP--------PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFT--- 103 (383)
T ss_dssp SSCCCHHHHHHHHHHHHSCCCCCCCC--------CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCHHHHHHHHHHHhcCCCCCCCC--------CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhC---
Confidence 346788999999998875 2223221 23467788888888888 678899999999999999999986
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC---CCcChhHHHhhccCCceEEEEeccccccccccC---hH
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN---GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 1552 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~---~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l~ 1552 (2602)
++||+|+++.++|+++...+... |++++.++.+++ +.+|+++|++++++++++|++++|+||||.++| ++
T Consensus 104 -~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~ 179 (383)
T 3kax_A 104 -KENESVLVQPPIYPPFFEMVTTN---NRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELT 179 (383)
T ss_dssp -CTTCEEEECSSCCHHHHHHHHHT---TCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHH
T ss_pred -CCCCEEEEcCCCcHHHHHHHHHc---CCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHH
Confidence 89999999999999987666554 999999988643 348999999999999999999999999999998 55
Q ss_pred HHHHHhhhcCCEEEEecccccCc----ccccCCCC-----CccEEEEccccccCCCc--eEEEEEe-cCCCCcccccccc
Q psy15216 1553 EIGELCRSKGVIFHCDAAQAVGK----IDINIQNY-----KVDLMSFSAHKIYGPKG--IGALYIR-RNPRTRIEAQIHG 1620 (2602)
Q Consensus 1553 ~I~~ia~~~gi~vivD~a~~~g~----~~~~l~~~-----~~D~~v~S~~K~~gp~G--~G~l~~~-~~~~~~l~~~~~g 1620 (2602)
+|.++|++||+++|+|++|+... .+.++..+ +..+++.|+||.+|++| +|+++++ +++.+.+.....
T Consensus 180 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~- 258 (383)
T 3kax_A 180 KLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQY- 258 (383)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHH-
T ss_pred HHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHh-
Confidence 66666999999999999997532 12222222 34588999999888666 7999884 555555543321
Q ss_pred CCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--CC
Q psy15216 1621 GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IE 1698 (2602)
Q Consensus 1621 ~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--~~ 1698 (2602)
....++++...+.++.+++......+++..+++.++++++.+.|.+.++++.+..+... ....+.++. .+
T Consensus 259 -----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 330 (383)
T 3kax_A 259 -----RQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGS---FLLWIDCSALNLS 330 (383)
T ss_dssp -----HTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBS---SEEEEECGGGCCC
T ss_pred -----hcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCce---EEEEEEccccCCC
Confidence 11234677777777777776544557888889999999999999875678887644322 222344443 35
Q ss_pred cHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1699 GESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1699 ~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
..++...| +||.+++|..|... ..+++|++++ ++.+++++++++|++.
T Consensus 331 ~~~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRi~~~--~~~~~i~~~l~~l~~~ 381 (383)
T 3kax_A 331 QDERTKLLEEKGKIIVEPGEKYGLG-----------------GEEHIGINIG--CPRSVLEEILNRLRHT 381 (383)
T ss_dssp HHHHHHHHHHTSCEECEESGGGCTT-----------------CTTEEEEECS--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCEEeECchhhcCC-----------------CCCeEEEEEc--CCHHHHHHHHHHHHHH
Confidence 66676655 59999999887643 1389999998 5899999999999863
No 142
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.91 E-value=1.3e-23 Score=273.85 Aligned_cols=308 Identities=15% Similarity=0.137 Sum_probs=230.2
Q ss_pred CCCHHHHHHHHHHHhhhc-CCCCCCCcchhhhHHHHHHHHHHHHHHHh----CC--CCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 8 PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLI----YA--DPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~-~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g~--~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
+.|+.+.+++.+.+.... .++. . ....++|+.+++++ |+ ++++|++|+|+|+|+++++.++.
T Consensus 54 ~~~~~v~~a~~~~~~~~~~~y~~------~----~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~- 122 (389)
T 1o4s_A 54 PTPEPVVEEAVRFLQKGEVKYTD------P----RGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALL- 122 (389)
T ss_dssp CCCHHHHHHHHHHHTTCCCCCCC------T----TCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhcCCCCCCC------C----CCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhC-
Confidence 467889999988885421 1111 1 11345566666665 75 67899999999999999999987
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC--CCccChHHHHhhccCCceEEEEecccCccccccc---H
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l 155 (2602)
++||+|++++++|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++| +
T Consensus 123 ---~~gd~Vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l 196 (389)
T 1o4s_A 123 ---DPGDEVIVFSPVWVSYIPQIILA---GGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFL 196 (389)
T ss_dssp ---CTTCEEEEEESCCTTHHHHHHHT---TCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred ---CCCCEEEEcCCCchhHHHHHHHc---CCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHH
Confidence 79999999999999987766544 99999999875 4678999999999999999999999999999988 8
Q ss_pred HHHHHHHHhcCCEEEEecccccccc---ccc---CCC-CCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCC
Q psy15216 156 LEIGELCRSKGVIFHCDAAQAVGKI---DIN---IQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGG 226 (2602)
Q Consensus 156 ~~I~~la~~~g~~livD~a~a~g~~---~~d---l~~-~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~ 226 (2602)
++|+++|++||+++|+|++|+.+.. +.+ +.. .+.|++++|+||++|++| +||+++++++++.+.+...+
T Consensus 197 ~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~-- 274 (389)
T 1o4s_A 197 EGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSH-- 274 (389)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhh--
Confidence 8999999999999999999986543 112 221 357899999999989888 89999988776666543311
Q ss_pred ccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHH
Q psy15216 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESL 306 (2602)
Q Consensus 227 ~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 306 (2602)
...+++.....++.++|+ .+.++..+++.++++++.+.|.+ . ++.+..+.. +...++.++ .+..++
T Consensus 275 -----~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~~-~~~~~l 340 (389)
T 1o4s_A 275 -----TTSCINTVAQYAALKALE---VDNSYMVQTFKERKNFVVERLKK-M-GVKFVEPEG---AFYLFFKVR-GDDVKF 340 (389)
T ss_dssp -----HTCSCCHHHHHHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHH-T-TCCCCCCSB---SSEEEEECS-SCHHHH
T ss_pred -----cccCCCHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh-c-CCeeecCCc---ceEEEEeCC-CCHHHH
Confidence 112344444444444554 23678888899999999999987 4 666554322 233334444 456667
Q ss_pred HHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 307 LMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 307 ~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
...| +||.+++|..|..+ +++||+++ ++++++++++++|++.
T Consensus 341 ~~~l~~~~gi~v~~g~~f~~~-------------------~~~Ris~~--~~~~~l~~~l~~l~~~ 385 (389)
T 1o4s_A 341 CERLLEEKKVALVPGSAFLKP-------------------GFVRLSFA--TSIERLTEALDRIEDF 385 (389)
T ss_dssp HHHHHHHHCEECEEGGGGTCT-------------------TEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEeCchhcCCC-------------------CeEEEEEe--CCHHHHHHHHHHHHHH
Confidence 6665 59999988766432 68999998 3899999999999853
No 143
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.91 E-value=3.7e-23 Score=272.28 Aligned_cols=318 Identities=14% Similarity=0.092 Sum_probs=239.4
Q ss_pred CCCCCHHHHHHHHHHHhhhc--CCCCCCCcchhhhHHHHHHHHHHHHHHHhC------------CCCCcEEEeCCHHHHH
Q psy15216 6 TTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIY------------ADPREIIWTSGATESN 71 (2602)
Q Consensus 6 ~~~~p~~v~~a~~~~l~~~~--~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g------------~~~~~Iv~t~g~T~al 71 (2602)
..++++.+.+++.+.+.... .++. .....++|++++++++ +++++|++|+|+++|+
T Consensus 48 ~~~~~~~v~~a~~~~~~~~~~~~y~~----------~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al 117 (416)
T 1bw0_A 48 NLLTSAAQIKKLKEAIDSQECNGYFP----------TVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGI 117 (416)
T ss_dssp CSCCCHHHHHHHHHHHHTTCSSSCCC----------TTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHH
T ss_pred CCCCCHHHHHHHHHHhhCCccCCcCC----------CCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHH
Confidence 35788999999999886421 1111 1124667888888887 6778999999999999
Q ss_pred HHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC--CCccChHHHHhhccCCceEEEEecccCcc
Q psy15216 72 NLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEI 149 (2602)
Q Consensus 72 ~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~ld~e~l~~~i~~~tklv~i~~~~npT 149 (2602)
++++.++. ++||+|+++.++|+++...+.. .|++++.++.++ ++.+|+++|+++++++++++++++|+|||
T Consensus 118 ~~~~~~l~----~~gd~vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~npt 190 (416)
T 1bw0_A 118 LMAITAIC----DAGDYALVPQPGFPHYETVCKA---YGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPC 190 (416)
T ss_dssp HHHHHHHC----CTTCEEEEEESCCTHHHHHHHH---TTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTT
T ss_pred HHHHHHhC----CCCCEEEEcCCCcHhHHHHHHH---cCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCC
Confidence 99999987 7999999999999998766554 499999998764 35689999999999999999999999999
Q ss_pred ccccc---HHHHHHHHHhcCCEEEEecccccc----c----ccccCCCC---CccEEEeccccccCCCC--cEEEEEecC
Q psy15216 150 GVIQP---ILEIGELCRSKGVIFHCDAAQAVG----K----IDINIQNY---KVDLMSFSAHKIYGPKG--IGALYIRRN 213 (2602)
Q Consensus 150 G~~~~---l~~I~~la~~~g~~livD~a~a~g----~----~~~dl~~~---~~D~~~~S~~K~~Gp~G--~G~l~~~~~ 213 (2602)
|.++| +++|.++|++||+++|+|++|+.. . ....+..+ +.++++.|+||.++++| +||++++++
T Consensus 191 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~ 270 (416)
T 1bw0_A 191 GSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDP 270 (416)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECT
T ss_pred CcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCc
Confidence 99999 889999999999999999999752 1 11223222 23577889999888777 799999874
Q ss_pred --CCCcccceecCCCccccccccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCC
Q psy15216 214 --PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRI 290 (2602)
Q Consensus 214 --~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~ 290 (2602)
+++.+.+.... .....++++....+++.++|+. ...++++..++++++++++.+.|.+ +|++.+..+..
T Consensus 271 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~--- 342 (416)
T 1bw0_A 271 HGNGPSFLEGLKR----VGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGE-CIGLAPTMPRG--- 342 (416)
T ss_dssp TCSCHHHHHHHHH----HHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTT-STTEEECCCCB---
T ss_pred hhhHHHHHHHHHH----HhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcccCCCe---
Confidence 55544321100 0012346777777777777773 2456788899999999999999987 67888764432
Q ss_pred CceEEEEEcc------cChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHH
Q psy15216 291 PHNLNISFNF------IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDF 361 (2602)
Q Consensus 291 ~~~~~~~~~~------~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~ 361 (2602)
.....+.++. .+..++...| +||.+++|..|.. ++++||+++ ++++++++
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~-------------------~~~iRis~~--~~~e~l~~ 401 (416)
T 1bw0_A 343 AMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHA-------------------PGFTRLTTT--RPVEVYRE 401 (416)
T ss_dssp TTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTC-------------------TTEEEEECC--SCHHHHHH
T ss_pred eEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCC-------------------CCeEEEEec--CCHHHHHH
Confidence 2334455542 3455666554 5999998877643 278999996 58999999
Q ss_pred HHHHHHhh
Q psy15216 362 TIKLLKMK 369 (2602)
Q Consensus 362 li~~L~~~ 369 (2602)
++++|++.
T Consensus 402 ~l~~l~~~ 409 (416)
T 1bw0_A 402 AVERIKAF 409 (416)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999863
No 144
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.91 E-value=8.9e-23 Score=269.76 Aligned_cols=298 Identities=14% Similarity=0.122 Sum_probs=225.5
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHH-HhCCcEEE
Q psy15216 36 GWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVT 114 (2602)
Q Consensus 36 ~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~ 114 (2602)
+....+..+++++++++++|++++++++++|+|.+++.+..++. +++||+|+++.++|+++...+..+ +..|++++
T Consensus 103 ~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~---~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~ 179 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR---ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLL 179 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHH---HHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEE
T ss_pred hhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHh---cCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEE
Confidence 44566788999999999999988888999999966555555543 368999999999999998888654 55799999
Q ss_pred EeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEecc-cccccccccCCCCCccEEE
Q psy15216 115 YLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAA-QAVGKIDINIQNYKVDLMS 193 (2602)
Q Consensus 115 ~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a-~a~g~~~~dl~~~~~D~~~ 193 (2602)
.++. +++.+|+++ ++++|++|++++| ||||.+.|+++|+++||++|+++++|.. +++|..+.+ ..+++|+++
T Consensus 180 ~v~~-~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~~~g~D~~~ 252 (438)
T 1wyu_A 180 TLPL-EGGRTPLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-GAYGADIAV 252 (438)
T ss_dssp EECC-BTTBCCCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-HHHTCSEEE
T ss_pred EEcC-cCCccCHHH----hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-ccCCCCEEE
Confidence 9987 557788876 7889999999999 9999999999999999999999998865 666654433 346789999
Q ss_pred ecccc------ccCCCCcEEEEEecCCCCcccceecCCCc-----------------cccccccCcch---hHHHHHHHH
Q psy15216 194 FSAHK------IYGPKGIGALYIRRNPRTRIEAQIHGGGH-----------------EYGLRSGTLAT---HQIVGMGEA 247 (2602)
Q Consensus 194 ~S~~K------~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~-----------------~~~~~~gt~~~---~~~~al~~a 247 (2602)
+|.|| ++|| |+|++++++++.+.+.+...|+.. ..++..+++++ ..+.++.++
T Consensus 253 ~s~kk~~~~~~~~Gp-~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa 331 (438)
T 1wyu_A 253 GDGQSLGLPMGFGGP-HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGA 331 (438)
T ss_dssp EECTTTTCCCGGGCS-CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHH
T ss_pred ECCcccCCCccCCCC-CeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHH
Confidence 99776 2356 899999999887776544322110 01234567766 455555555
Q ss_pred --HHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEE--ccccc
Q psy15216 248 --FRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAV--SSGSA 320 (2602)
Q Consensus 248 --l~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v--~~g~~ 320 (2602)
+.+ ...+++++.++..++++++.+.|.+ ++|++++.+. . ....+.+.++ .+..++.+.| +||.+ +++..
T Consensus 332 ~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~-~-~~~~~~~~~~-~~~~~~~~~L~~~gi~v~~~~~~~ 407 (438)
T 1wyu_A 332 MYLAALGPEGLREVALKSVEMAHKLHALLLE-VPGVRPFTPK-P-FFNEFALALP-KDPEAVRRALAERGFHGATPVPRE 407 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-STTCEECSCS-S-BCSEEEEECS-SCHHHHHHHHHHTTCCCCEECCTT
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEECCCC-C-eEEEEEEeCC-CCHHHHHHHHHHCCceeccccccc
Confidence 553 3356888999999999999999988 6799987642 1 1122233332 3566777777 78887 44543
Q ss_pred CCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 321 CTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
|. .+++|||++.++|++|+++++++|++
T Consensus 408 ~~--------------------~~~lRis~~~~~t~edi~~~~~~l~~ 435 (438)
T 1wyu_A 408 YG--------------------ENLALFAATELHEEEDLLALREALKE 435 (438)
T ss_dssp SC--------------------SSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred cC--------------------CCeEEEEecccCCHHHHHHHHHHHHH
Confidence 32 27899999999999999999999985
No 145
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.90 E-value=1.6e-22 Score=273.01 Aligned_cols=325 Identities=19% Similarity=0.177 Sum_probs=246.1
Q ss_pred CCHHHHHHHHHHHhhhc-CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC--CcE--EEeCCHHHHHHHHHHhcccccc
Q psy15216 9 IDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYADP--REI--IWTSGATESNNLAIKGAAHFYK 83 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~-~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~--~~I--v~t~g~T~al~~~~~~l~~~~~ 83 (2602)
..+.+.+++.+.+.... .++.. +........+.+++++++++++|+++ +++ ++++|+|+|+.+++.++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~---- 181 (514)
T 3mad_A 108 GDEHHIAFLNEVYALQSQSNPLH--PDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYR---- 181 (514)
T ss_dssp CCHHHHHHHHHHHHHHTTCCTTC--TTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHH----
T ss_pred CCCCHHHHHHHHHHHHhhcCCcc--cccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHH----
Confidence 34556666666554322 22221 22233445677788999999999864 577 999999999999999987
Q ss_pred cCC--------CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccH
Q psy15216 84 KRG--------KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI 155 (2602)
Q Consensus 84 ~~g--------d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l 155 (2602)
.+| |+|+++.+.|+++...+... |++++.+++++++.+|+++|++++++++++|++++++||||.+.|+
T Consensus 182 ~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~---G~~v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l 258 (514)
T 3mad_A 182 DWARATKGITAPEAVVPVSAHAAFDKAAQYF---GIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPI 258 (514)
T ss_dssp HHHHHHHCCSSCEEEEETTSCTHHHHHHHHH---TCEEEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCH
T ss_pred HHhhhhcCCCCCeEEEeCccchHHHHHHHHc---CCeeEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCH
Confidence 444 89999999999988888777 9999999999899999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecccccccc-----------cccCCCCCccEEEeccccc-cCCCCcEEEEEecCCCCccccee-
Q psy15216 156 LEIGELCRSKGVIFHCDAAQAVGKI-----------DINIQNYKVDLMSFSAHKI-YGPKGIGALYIRRNPRTRIEAQI- 222 (2602)
Q Consensus 156 ~~I~~la~~~g~~livD~a~a~g~~-----------~~dl~~~~~D~~~~S~~K~-~Gp~G~G~l~~~~~~~~~l~~~~- 222 (2602)
++|.++|++||+++|+|++|+.+.. +++....++|++++|+||+ +|+.|+|+++++++.........
T Consensus 259 ~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~ 338 (514)
T 3mad_A 259 PEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIA 338 (514)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEE
T ss_pred HHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccc
Confidence 9999999999999999999875432 3555666889999999995 78889999999876433322111
Q ss_pred ---cCCCccccccccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEE
Q psy15216 223 ---HGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF 298 (2602)
Q Consensus 223 ---~g~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~ 298 (2602)
.++........|+.+....+++.+++.. ...++++..++..++++++.+.|.+ +++++++.++. .++.+..
T Consensus 339 ~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~----~~~~~~~ 413 (514)
T 3mad_A 339 ADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRA-IPSLKILGDPL----WVIAVAS 413 (514)
T ss_dssp SSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTCEESSCCS----SEEEEEC
T ss_pred cccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh-CCCeEEeCCCe----EEEEEeC
Confidence 1111111223567777777778888874 3456889999999999999999988 78998886542 2333333
Q ss_pred cccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecC-CCCCHHHHHHHHHHHHhh
Q psy15216 299 NFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 299 ~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~-~~~t~edid~li~~L~~~ 369 (2602)
...+..++.+.| +||.+ ++..+ .+++|+++. ..++++++++++++|++.
T Consensus 414 ~~~~~~~l~~~L~~~Gi~v-~g~~~---------------------~~~~Ri~~~~~~~~~e~i~~~l~~L~~~ 465 (514)
T 3mad_A 414 DELNIYQVMEEMAGRGWRL-NGLHR---------------------PPAFHVALTLRHTEPGVVDRFLADLQDA 465 (514)
T ss_dssp SSSCHHHHHHHHHTTTCBC-EEETT---------------------TTEEEEECCGGGGSTTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCEe-ccCCC---------------------CCeEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 445667777777 67776 33322 267999997 445669999999999964
No 146
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.90 E-value=9.5e-23 Score=274.61 Aligned_cols=346 Identities=17% Similarity=0.191 Sum_probs=235.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||+..+++.|..++.. ++.. +.|+....+..+.....+.+++++++++++|+++++++|++|+|+|+..++.++..
T Consensus 112 ~~~~~~~~~~~~~~~~---~l~~-~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~ 187 (515)
T 2jis_A 112 FNQLFSGLDPHALAGR---IITE-SLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARY 187 (515)
T ss_dssp ESSSCCCCCHHHHHHH---HHHH-HHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCHHHHHHH---HHHH-HhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHH
Confidence 3566666666665553 2322 23554434455556677888999999999999888999999999999999888742
Q ss_pred cc----ccCCC------EEEEcCCCCcccHHHHHHHHhCCc---EEEEeccCCCCccChHHHHhhccC------CceEEE
Q psy15216 81 FY----KKRGK------HIITVQTEHKSVLDSIRKLENDGF---RVTYLKPKNNGLITLSQLEEKICS------DTILVS 141 (2602)
Q Consensus 81 ~~----~~~gd------~Vlv~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~~~~ld~e~l~~~i~~------~tklv~ 141 (2602)
.. ..+|+ +|+++..+|+++..++..+ |. +++.+++++++.+|+++|+++|++ +|++|+
T Consensus 188 ~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~---g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv 264 (515)
T 2jis_A 188 QRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFL---GLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVS 264 (515)
T ss_dssp HHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHT---TSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHc---CCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEE
Confidence 11 12465 8999999999999888776 55 899999988899999999999975 489999
Q ss_pred EecccCcccccccHHHHHHHHHhcCCEEEEeccccccccccc-----CCCC-CccEEEecccccc-CCCCcEEEEEecC-
Q psy15216 142 VMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN-----IQNY-KVDLMSFSAHKIY-GPKGIGALYIRRN- 213 (2602)
Q Consensus 142 i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~d-----l~~~-~~D~~~~S~~K~~-Gp~G~G~l~~~~~- 213 (2602)
+++++|+||.+.|+++|+++|++||+++|+|++|+.+..+.+ +... ++|++++|+||++ +|.|+|+++++++
T Consensus 265 ~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~ 344 (515)
T 2jis_A 265 ATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTS 344 (515)
T ss_dssp EEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCS
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChH
Confidence 999999999999999999999999999999999998877654 4444 7899999999965 5889999999876
Q ss_pred -CCCc----ccceecCCCc--cccccccCcch-----hHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhhccCce
Q psy15216 214 -PRTR----IEAQIHGGGH--EYGLRSGTLAT-----HQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEI 280 (2602)
Q Consensus 214 -~~~~----l~~~~~g~~~--~~~~~~gt~~~-----~~~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~ 280 (2602)
++.. ..++..++.. ...+..+++++ ....++.++++ +...++++..++..++++++.+.|.+ .+++
T Consensus 345 ~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~g~ 423 (515)
T 2jis_A 345 NLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKK-REGF 423 (515)
T ss_dssp CHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTE
T ss_pred HHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCE
Confidence 4333 2233322211 00112222211 01223333444 33467889999999999999999988 7899
Q ss_pred EEeCCCCCCCCceEEEEE-cc-c----ChhHHHHH-------hCCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEE
Q psy15216 281 YINGDMNNRIPHNLNISF-NF-I----EGESLLMA-------IKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (2602)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~-~~-~----~~~~~~~~-------L~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (2602)
+++.++.. ..+.|.+ +. . +..++... +.+.....|..|... ... . ...+++|
T Consensus 424 ~~~~~~~~---~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~--------~~~--~--~~~~~lR 488 (515)
T 2jis_A 424 ELVMEPEF---VNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGY--------QPH--G--TRGNFFR 488 (515)
T ss_dssp EESSCCSS---SEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEE--------EEE--T--TEEEEEE
T ss_pred EEeCCCCe---eEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEE--------EEE--C--CceEEEE
Confidence 99875431 2344443 21 1 11111110 111111222222110 000 0 0126899
Q ss_pred Eec-CCCCCHHHHHHHHHHHHhh
Q psy15216 348 FTI-GRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 348 is~-~~~~t~edid~li~~L~~~ 369 (2602)
+++ ++++|++||++++++|++.
T Consensus 489 is~~~~~~t~edid~~~~~l~~~ 511 (515)
T 2jis_A 489 VVVANSALTCADMDFLLNELERL 511 (515)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHH
Confidence 999 8999999999999999863
No 147
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.90 E-value=3.9e-23 Score=272.09 Aligned_cols=318 Identities=15% Similarity=0.170 Sum_probs=246.4
Q ss_pred CCCHHHHHHHHHHHhhh-cCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhccccccc
Q psy15216 8 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFYKK 84 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~-~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g--~~~~~Iv~t~g~T~al~~~~~~l~~~~~~ 84 (2602)
++++.+.+++.+.+... +.++. ...+..+++++++++.+| +++++|++++|+++|++.++.++. +
T Consensus 74 ~~~~~v~~a~~~~~~~~~~~y~~--------~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~----~ 141 (421)
T 3l8a_A 74 LPVPEIKEAIINYGREHIFGYNY--------FNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFS----E 141 (421)
T ss_dssp CCCHHHHHHHHHHHHHCCSSCBC--------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS----C
T ss_pred CCCHHHHHHHHHHHhcCCcCCCC--------CCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhc----C
Confidence 67899999999988652 22211 124577888999999998 577899999999999999999987 7
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccC-C--CCccChHHHHhhcc-CCceEEEEecccCcccccc---cHHH
Q psy15216 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-N--NGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQ---PILE 157 (2602)
Q Consensus 85 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-~--~~~ld~e~l~~~i~-~~tklv~i~~~~npTG~~~---~l~~ 157 (2602)
+||+|+++.+.|+++...+... |.+++.++.+ . ++.+|+++|+++++ +++++|++++|+||||.++ ++++
T Consensus 142 ~gd~Vi~~~~~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~ 218 (421)
T 3l8a_A 142 KGDAVLINSPVYYPFARTIRLN---DHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIK 218 (421)
T ss_dssp TEEEEEEEESCCHHHHHHHHHT---TEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred CCCEEEECCCCcHHHHHHHHHC---CCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHH
Confidence 9999999999999987766655 9999999875 2 34689999999998 8999999999999999985 4888
Q ss_pred HHHHHHhcCCEEEEeccccccc----ccccCCC-----CCccEEEeccccccCCCC--cEEEEEe-cCCCCcccceecCC
Q psy15216 158 IGELCRSKGVIFHCDAAQAVGK----IDINIQN-----YKVDLMSFSAHKIYGPKG--IGALYIR-RNPRTRIEAQIHGG 225 (2602)
Q Consensus 158 I~~la~~~g~~livD~a~a~g~----~~~dl~~-----~~~D~~~~S~~K~~Gp~G--~G~l~~~-~~~~~~l~~~~~g~ 225 (2602)
|.++|++||+++|+|++|+... ....+.. .+.++++.|++|.+|++| +|+++++ +++.+.+.+...
T Consensus 219 l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~-- 296 (421)
T 3l8a_A 219 IAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQL-- 296 (421)
T ss_dssp HHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHH--
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHH--
Confidence 9999999999999999987522 1112211 244588999999888766 6999988 666665554321
Q ss_pred CccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--cCh
Q psy15216 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEG 303 (2602)
Q Consensus 226 ~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~--~~~ 303 (2602)
.+..++++.++++++.++++....++++..++..++++++.+.|.+ .|++.+..+... ...++.++. .+.
T Consensus 297 ----~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~i~~~~~~~~---~~~~v~~~~~~~~~ 368 (421)
T 3l8a_A 297 ----ANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEA-KTKIKVMEPEGT---YLVWLDFSAYAIAQ 368 (421)
T ss_dssp ----HTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-HCSCEEECCSBS---SEEEEECGGGTCCT
T ss_pred ----hcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh-CCCceEeCCCee---EEEEEeccccCCCH
Confidence 1224568888888888888855566888999999999999999987 488888765432 233355553 466
Q ss_pred hHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 304 ESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 304 ~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++...| +||.+++|..|... ..+++||+++ ++++++++++++|++.
T Consensus 369 ~~l~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRi~~~--~~~~~i~~~l~~l~~~ 418 (421)
T 3l8a_A 369 PQLSEKLQNEAKVVLNDGAHFGKE-----------------GKYFARLNVA--TPKNTVQEALSRIISV 418 (421)
T ss_dssp THHHHHHHHTTCEECEEGGGGCGG-----------------GTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEECchhhCCC-----------------CCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 6777766 49999998877531 2489999998 5899999999999863
No 148
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.90 E-value=4.3e-23 Score=268.57 Aligned_cols=315 Identities=15% Similarity=0.156 Sum_probs=236.1
Q ss_pred CCCHHHHHHHHHHHhhhc-CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCC
Q psy15216 8 PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~-~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~g 86 (2602)
++++.+.+++.+.+.... .++.. .+..+ ..+..+++|+++++++|++ +.++++++|+|+..++.++. ++|
T Consensus 53 ~~~~~v~~a~~~~~~~~~~~~~~~-~~~~g--~~~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~~~~~~~----~~g 123 (384)
T 1bs0_A 53 SHHPQIIRAWQQGAEQFGIGSGGS-GHVSG--YSVVHQALEEELAEWLGYS--RALLFISGFAANQAVIAAMM----AKE 123 (384)
T ss_dssp GGCHHHHHHHHHHHHHHCSCCCSB-TTTTC--CCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHC----CTT
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCc-CcccC--ChHHHHHHHHHHHHHhCCC--cEEEeCCcHHHHHHHHHHhC----CCC
Confidence 478999999999887521 11111 11111 2346789999999999985 55666666999999999886 899
Q ss_pred CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCC---ceEEEEecccCcccccccHHHHHHHHH
Q psy15216 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD---TILVSVMLVNNEIGVIQPILEIGELCR 163 (2602)
Q Consensus 87 d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~---tklv~i~~~~npTG~~~~l~~I~~la~ 163 (2602)
|.|+++.+.|+++...+.. .|++++.++. .|+++|+++++++ ++++++++++||||.++|+++|.++|+
T Consensus 124 d~v~~~~~~~~~~~~~~~~---~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 195 (384)
T 1bs0_A 124 DRIAADRLSHASLLEAASL---SPSQLRRFAH-----NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQ 195 (384)
T ss_dssp CEEEEETTCCHHHHHHHHT---SSSEEEEECT-----TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHH
T ss_pred cEEEEcccccHHHHHHHHH---cCCCEEEeCC-----CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHH
Confidence 9999999999988776654 4999999873 4899999988753 789999999999999999999999999
Q ss_pred hcCCEEEEeccccccccc------ccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCcccccc-ccCc
Q psy15216 164 SKGVIFHCDAAQAVGKID------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLR-SGTL 236 (2602)
Q Consensus 164 ~~g~~livD~a~a~g~~~------~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~-~gt~ 236 (2602)
+||+++|+|++|+.+... .+....++|++++|+||++||+| ||+++++++++.+.+... .+. .+++
T Consensus 196 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~~~~~~~~~~~l~~~~~------~~~~~~~~ 268 (384)
T 1bs0_A 196 QHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG-AAVLCSSTVADYLLQFAR------HLIYSTSM 268 (384)
T ss_dssp HTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC-EEEEECHHHHHHHHHHCH------HHHSSBCC
T ss_pred HcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccC-cEEEeCHHHHHHHHHhch------hhhcCCCC
Confidence 999999999999866421 11112357899999999999988 999999877666543211 111 2257
Q ss_pred chhHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc-cChhHHHHHh--CC
Q psy15216 237 ATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI--KD 312 (2602)
Q Consensus 237 ~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~L--~g 312 (2602)
+.....++.++++.... +.++..++++++++++.+.|.+ . ++++..+ . ..++.+.++. .+..++.+.| +|
T Consensus 269 ~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~-~---~~~~~~~~~~~~~~~~l~~~l~~~g 342 (384)
T 1bs0_A 269 PPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQD-L-PFTLADS-C---SAIQPLIVGDNSRALQLAEKLRQQG 342 (384)
T ss_dssp CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-S-SCEECSC-C---SSBCCEEEESHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh-c-CCcccCC-C---CCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 77777777788886553 5678899999999999999987 3 6776532 1 2233344542 3455666666 79
Q ss_pred eEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 313 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 313 I~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
|.++++..+..+ ...+++||+++.+++++++++++++|++
T Consensus 343 i~v~~~~~~~~~----------------~~~~~~Ri~~~~~~~~~~i~~~~~~l~~ 382 (384)
T 1bs0_A 343 CWVTAIRPPTVP----------------AGTARLRLTLTAAHEMQDIDRLLEVLHG 382 (384)
T ss_dssp EECCEECTTSSC----------------TTCEEECCBCCTTCCHHHHHHHHHHHHH
T ss_pred cEEEeecCCCCC----------------CCCceEEEEEcCCCCHHHHHHHHHHHHh
Confidence 999987654211 1237899999999999999999999985
No 149
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.90 E-value=5.3e-23 Score=253.25 Aligned_cols=204 Identities=22% Similarity=0.315 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHHHHHHHHHHHHcCCceEEEechhHHHHHHhhhccCcccceEE
Q psy15216 742 PIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFA 821 (2602)
Q Consensus 742 ~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~~~~Aa~~AGl~~~~li~EPtAAAl~y~~~~~~~~~~vl 821 (2602)
-.+....+|+++++.++.+.+.....+++|+|++|...+|++++++++.+|+++..++.||+|++++|+.. ..+
T Consensus 69 d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~------~~~ 142 (272)
T 3h1q_A 69 DYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN------DGI 142 (272)
T ss_dssp THHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS------SEE
T ss_pred cHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC------CEE
Confidence 34666789999999999988888889999999999999999999999999999999999999999988763 259
Q ss_pred EEEeCCceEEEEEEEEECCEEEEEEEecCCCCcchHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHcccccceE
Q psy15216 822 VYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVK 901 (2602)
Q Consensus 822 V~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~~~ 901 (2602)
|+|+||||+|+++++ ++.+. ......+||.+||+.+.+++.- + ...+|++|+.++
T Consensus 143 viDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~~-------~-------~~~ae~~k~~~~------ 197 (272)
T 3h1q_A 143 VVDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYKI-------P-------FEEAETIKKDFS------ 197 (272)
T ss_dssp EEEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHTC-------C-------HHHHHHHHHSST------
T ss_pred EEEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhCC-------C-------HHHHHHHHHhcC------
Confidence 999999999999886 44332 3456899999999999887641 1 357889998876
Q ss_pred EEEEecCCceEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccchHHHHHHHHhhccCcccCcC
Q psy15216 902 LNVKLSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSI 981 (2602)
Q Consensus 902 ~~i~~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~a~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~~~~~~~~ 981 (2602)
+++++++++.++++++.+.+.+.++..+ +++.|+|+||++++|.+++++++.|+.++..+.
T Consensus 198 ---------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~ 258 (272)
T 3h1q_A 198 ---------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPI 258 (272)
T ss_dssp ---------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCS
T ss_pred ---------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHhCCCccccC
Confidence 6899999999999999999999988764 478999999999999999999999999999999
Q ss_pred CcchHhHHHHHHHh
Q psy15216 982 DPDKAVVFGAAIQA 995 (2602)
Q Consensus 982 ~p~~aVa~GAa~~a 995 (2602)
||++++|+|||++|
T Consensus 259 ~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 259 HPLLVTPLGIALFG 272 (272)
T ss_dssp SGGGHHHHHHHTTC
T ss_pred ChHHHHHHHHHhcC
Confidence 99999999999875
No 150
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.90 E-value=2.7e-23 Score=270.88 Aligned_cols=313 Identities=14% Similarity=0.097 Sum_probs=229.4
Q ss_pred CCCHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHHHHHHHHHHh----CC--CCCcEEEeCCHHHHHHHHHHhhhh
Q psy15216 1404 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLI----YA--DPREIIWTSGATESNNLAIKGAAH 1476 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g~--~~~~iv~t~gaT~al~~al~~l~~ 1476 (2602)
+.++.+.+++.+.++.. ..++.. . ...++|+.+++++ |. ++++|++|+|+|+|++.++.++.
T Consensus 43 ~~~~~v~~a~~~~~~~~~~~y~~~------~----g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~- 111 (388)
T 1j32_A 43 NTPKHIVEAAKAALEQGKTRYGPA------A----GEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMI- 111 (388)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCT------T----CCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCC------C----CCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhc-
Confidence 45788899998888642 222221 1 1234455555554 54 67789999999999999999986
Q ss_pred hhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC--CCCcChhHHHhhccCCceEEEEeccccccccccC---h
Q psy15216 1477 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 1551 (2602)
Q Consensus 1477 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l 1551 (2602)
++||+|++++++|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++| +
T Consensus 112 ---~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l 185 (388)
T 1j32_A 112 ---EPGDEVIIPAPFWVSYPEMVKLA---EGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEV 185 (388)
T ss_dssp ---CTTCEEEEESSCCTHHHHHHHHT---TCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred ---CCCCEEEEcCCCChhHHHHHHHc---CCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHH
Confidence 79999999999999987665544 99999999875 5679999999999999999999999999999987 8
Q ss_pred HHHHHHhhhcCCEEEEecccccCcc----cccCCC-----CCccEEEEccccccCCCc--eEEEEEecCCCCcccccccc
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGKI----DINIQN-----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHG 1620 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~~----~~~l~~-----~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g 1620 (2602)
++|.++|++||+++|+|++|+.... ..++.. .+.++++.|+||.+|++| +|++++++++++.+.+...+
T Consensus 186 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~ 265 (388)
T 1j32_A 186 RAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGH 265 (388)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHHHHHHHHHhh
Confidence 8999999999999999999875432 111111 346899999999888888 89999988766655543211
Q ss_pred CCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe--cCC
Q psy15216 1621 GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--FIE 1698 (2602)
Q Consensus 1621 ~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~--~~~ 1698 (2602)
+ ..+.+.....++.++|+....++++.++++.++++++.+.|.+ .+++.+..+... ....+.++ +.+
T Consensus 266 ~-------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~---~~~~~~~~~~~~~ 334 (388)
T 1j32_A 266 S-------TSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNA-MPGLECPKPDGA---FYMFPSIAKTGRS 334 (388)
T ss_dssp T-------TCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHT-CTTCBCCCCCBT---TEECCBCGGGTCC
T ss_pred c-------ccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhh-CCCCcccCCCee---EEEEEecCCCCCC
Confidence 1 1233444444455666533345778888999999999999987 677766543221 11112222 234
Q ss_pred cHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1699 GESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1699 ~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
..++...| +||.+++|..|... +++|++++ ++.+++++++++|++.
T Consensus 335 ~~~~~~~l~~~~gi~v~~g~~~~~~-------------------~~iRis~~--~~~~~i~~~~~~l~~~ 383 (388)
T 1j32_A 335 SLDFCSELLDQHQVATVPGAAFGAD-------------------DCIRLSYA--TDLDTIKRGMERLEKF 383 (388)
T ss_dssp HHHHHHHHHHHHCEECEEGGGGTCT-------------------TBEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeChhhhCCC-------------------CcEEEEec--CCHHHHHHHHHHHHHH
Confidence 55666655 49999998876432 78999997 6999999999999863
No 151
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.90 E-value=5.3e-23 Score=268.26 Aligned_cols=314 Identities=13% Similarity=0.112 Sum_probs=236.0
Q ss_pred CCCHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHHHHHHHHHHh----C--CCCCc-EEEeCCHHHHHHHHHHhhh
Q psy15216 1404 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPRE-IIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g--~~~~~-iv~t~gaT~al~~al~~l~ 1475 (2602)
+.++.+.+++.+.++.. ..++.. ....++|+.+++++ | +++++ +++|+|+++|+..++.++.
T Consensus 39 ~~~~~v~~a~~~~~~~~~~~y~~~----------~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~ 108 (389)
T 1gd9_A 39 DTPQHIKEYAKEALDKGLTHYGPN----------IGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFL 108 (389)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCT----------TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCC----------CCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhC
Confidence 46788999999888652 122221 11345666777766 8 46788 9999999999999999886
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC--CCCcChhHHHhhccCCceEEEEeccccccccccC---
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP--- 1550 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~--- 1550 (2602)
++||+|++++++|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++|
T Consensus 109 ----~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~ 181 (389)
T 1gd9_A 109 ----KDGEEVLIPTPAFVSYAPAVILA---GGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKD 181 (389)
T ss_dssp ----CTTCEEEEEESCCTTHHHHHHHH---TCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred ----CCCCEEEEcCCCchhHHHHHHHC---CCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHH
Confidence 79999999999999988777665 99999999875 4568999999999999999999999999999996
Q ss_pred hHHHHHHhhhcCCEEEEecccccCcc----cccCCC----CCccEEEEccccccCCCc--eEEEEEecCCCCcccccccc
Q psy15216 1551 ILEIGELCRSKGVIFHCDAAQAVGKI----DINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHG 1620 (2602)
Q Consensus 1551 l~~I~~ia~~~gi~vivD~a~~~g~~----~~~l~~----~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g 1620 (2602)
+++|.++|++||+++|+|++|+.+.. +.++.. .+.|+++.|+||.+|++| +||+++++++++.+.+...+
T Consensus 182 l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~ 261 (389)
T 1gd9_A 182 LEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMY 261 (389)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhh
Confidence 88999999999999999999986543 122222 357899999999888888 79999987766666543321
Q ss_pred CCccccCCCCCcchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe--c
Q psy15216 1621 GGHEYGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--F 1696 (2602)
Q Consensus 1621 ~~~~~~~~~gt~~~~~~~al~~aL~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~--~ 1696 (2602)
..++.+...+.++.++|+.... ++++.++++.++++++.+.|.+ . ++.+..+.. .....+.++ +
T Consensus 262 -------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~~~~~ 329 (389)
T 1gd9_A 262 -------NATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNE-M-GLPTVKPKG---AFYIFPRIRDTG 329 (389)
T ss_dssp -------TTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCCCCCB---TTEECCBCGGGT
T ss_pred -------hccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHH-c-CCeecCCCe---eeEEEEeccCCC
Confidence 1235566666667677774333 6788889999999999999987 4 665543221 112222333 2
Q ss_pred CCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1697 IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1697 ~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.+..++...| +||.+++|..|... ..+++||+++. +.+++++++++|++.
T Consensus 330 ~~~~~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRi~~~~--~~~~i~~~l~~l~~~ 382 (389)
T 1gd9_A 330 LTSKKFSELMLKEARVAVVPGSAFGKA-----------------GEGYVRISYAT--AYEKLEEAMDRMERV 382 (389)
T ss_dssp CCHHHHHHHHHHHTCEECEEGGGGCGG-----------------GTTBEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCCC-----------------CCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 3455665554 69999998876531 13789999985 899999999999873
No 152
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.90 E-value=3.3e-23 Score=270.35 Aligned_cols=312 Identities=15% Similarity=0.125 Sum_probs=229.6
Q ss_pred CCCHHHHHHHHHHHhhh-cCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 8 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~-~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g--~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
++|+.+.+++.+.+... ..++ ......++|+.+++++ | +++++|++|+|+|+|+++++.++.
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~y~----------~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~- 112 (391)
T 3h14_A 44 GAPRGAVEALAKSLETDALGYT----------VALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALF- 112 (391)
T ss_dssp CSCHHHHHHHHHHHC--------------------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhcCCCCCC----------CCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhc-
Confidence 56888999998887541 1111 1112345566666665 4 577899999999999999999987
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC--CccChHHHHhhccCCceEEEEecccCccccccc---H
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~--~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l 155 (2602)
++||+|+++.+.|+++...+... |++++.++.+++ +.+|+++++++ ++++|++++|+||||.++| +
T Consensus 113 ---~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l 183 (391)
T 3h14_A 113 ---DSGDRVGIGAPGYPSYRQILRAL---GLVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAAM 183 (391)
T ss_dssp ---CTTCEEEEEESCCHHHHHHHHHT---TCEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTCCCCCHHHH
T ss_pred ---CCCCEEEEcCCCCccHHHHHHHc---CCEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCCccCCHHHH
Confidence 89999999999999987666554 999999998764 46899999887 7999999999999999998 7
Q ss_pred HHHHHHHHhcCCEEEEecccccccc---cccCCC-CCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccc
Q psy15216 156 LEIGELCRSKGVIFHCDAAQAVGKI---DINIQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEY 229 (2602)
Q Consensus 156 ~~I~~la~~~g~~livD~a~a~g~~---~~dl~~-~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~ 229 (2602)
++|+++|++||+++|+|++|+.... +..... .+.++++.|+||.+|++| +||+++++++++.+.....
T Consensus 184 ~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~------ 257 (391)
T 3h14_A 184 GALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQ------ 257 (391)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHHHH------
T ss_pred HHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHHHHh------
Confidence 7889999999999999999974321 222222 245688899999888777 7999998877666654321
Q ss_pred cccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc--ccChhHHH
Q psy15216 230 GLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--FIEGESLL 307 (2602)
Q Consensus 230 ~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~--~~~~~~~~ 307 (2602)
...++++.....++.++++ ...++++..+++.++++++.+.|.+ .+......+.. ....++.++ ..+..++.
T Consensus 258 -~~~~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 331 (391)
T 3h14_A 258 -NMFICAPHASQVAALAALD-CDAELQANLDVYKANRKLMLERLPK-AGFTRIAPPDG---AFYVYADVSDLTDDSRAFA 331 (391)
T ss_dssp -HTTCCCCHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHH-HTCCCBCCCCB---TTEEEEECTTTCSCHHHHH
T ss_pred -hhccCCCHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHH-cCCCcccCCCe---eEEEEEecCccCCCHHHHH
Confidence 1234667777776767776 4456788889999999999999987 33222222221 233444454 34666777
Q ss_pred HHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 308 MAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 308 ~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..| +||.+++|..|..+ ...+++||+++. ++++++.++++|++.
T Consensus 332 ~~l~~~~gi~v~~g~~~~~~----------------~~~~~iRis~~~--~~~~i~~~l~~l~~~ 378 (391)
T 3h14_A 332 AEILEKAGVAVTPGLDFDPE----------------RGAGTLRFSYAR--ATADIEEGLDRLEAF 378 (391)
T ss_dssp HHHHHHHCEECEEGGGTCTT----------------TGGGEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEcCchhhCCC----------------CCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 765 39999999888641 113799999986 789999999999863
No 153
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.6e-22 Score=272.29 Aligned_cols=330 Identities=16% Similarity=0.129 Sum_probs=248.9
Q ss_pred CCHHHHHHHHHHHhhcc-CCCCCccchhHHHHHHHHHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHhhhhhh-cc
Q psy15216 1405 IDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PREIIWTSGATESNNLAIKGAAHFY-KK 1480 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~-~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~--~~~iv~t~gaT~al~~al~~l~~~~-~~ 1480 (2602)
.++.+.+++.+.+.... .++.. +.......++..++++++++++|++ ++++++++|+|+|+.+++.++.... .+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~ 153 (497)
T 3mc6_A 76 GGDDLIHLQTIAYEKYCVANQLH--PDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHH 153 (497)
T ss_dssp CCHHHHHHHHHHHHHTSSCBTTC--TTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhhcCCCC--cccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhc
Confidence 34677888888776532 23322 2333456678889999999999987 6789999999999999999986211 01
Q ss_pred CC---CEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHhhccCCceEEEEeccccccccccChHHHHH
Q psy15216 1481 RG---KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 1556 (2602)
Q Consensus 1481 ~g---d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ 1556 (2602)
+| ++|+++.+.|+++...+..+ |++++.+++++ ++.+|+++|+++++++|++|++++|+||||.+.|+++|.+
T Consensus 154 ~g~~~~~Vi~~~~~h~~~~~~~~~~---G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~ 230 (497)
T 3mc6_A 154 RGITEPEIIAPVTAHAGFDKAAYYF---GMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGK 230 (497)
T ss_dssp SCCSSCEEEEETTSCHHHHHHHHHS---CCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTT
T ss_pred CCCCCceEEEeCCccHHHHHHHHHc---CCeEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHH
Confidence 45 89999999999988777666 99999999987 7889999999999999999999999999999999999999
Q ss_pred HhhhcCCEEEEecccccCcc------------cccCCCCCccEEEEccccc-cCCCceEEEEEecCCCCcc----ccccc
Q psy15216 1557 LCRSKGVIFHCDAAQAVGKI------------DINIQNYKVDLMSFSAHKI-YGPKGIGALYIRRNPRTRI----EAQIH 1619 (2602)
Q Consensus 1557 ia~~~gi~vivD~a~~~g~~------------~~~l~~~~~D~~v~S~~K~-~gp~G~G~l~~~~~~~~~l----~~~~~ 1619 (2602)
+|++||+++|+|++|+.+.. +++....++|++++|+||+ +||.|+|+++++++.+... .+.+.
T Consensus 231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 310 (497)
T 3mc6_A 231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWT 310 (497)
T ss_dssp HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCT
T ss_pred HHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhccccccc
Confidence 99999999999999974322 3455566799999999995 6888999999987533222 22222
Q ss_pred cCCccccCCCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCC
Q psy15216 1620 GGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE 1698 (2602)
Q Consensus 1620 g~~~~~~~~~gt~~~~~~~al~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~ 1698 (2602)
++........|+.+...++++.+++.. ...++.+..++..++++++++.|.+.++++.+..++. .....+..+..+
T Consensus 311 ~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~---~~~v~~~~~~~~ 387 (497)
T 3mc6_A 311 GGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPR---YSVISFSSKTLN 387 (497)
T ss_dssp TSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCC---SSEEEEECTTTT
T ss_pred CCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCC---eeEEEEeCCCCC
Confidence 222122223456666667778888874 4456788899999999999999987457888875432 223333333445
Q ss_pred cHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1699 GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1699 ~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
..++...| +||.++.+..+ ..+|++++ .+|.+++++++++|++.
T Consensus 388 ~~~l~~~L~~~Gi~v~~~~~~----------------------~~~ri~~~-~~t~e~i~~~~~~L~~~ 433 (497)
T 3mc6_A 388 IHELSDRLSKKGWHFNALQKP----------------------VALHMAFT-RLSAHVVDEICDILRTT 433 (497)
T ss_dssp HHHHHHHHHTTTCBCEECCSS----------------------CCEEEECC-TTTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEecCCCC----------------------CeEEEEEe-CCCHHHHHHHHHHHHHH
Confidence 66777776 68877543221 45899988 67999999999999974
No 154
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.90 E-value=4.2e-23 Score=267.82 Aligned_cols=314 Identities=14% Similarity=0.113 Sum_probs=233.4
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHh----CCC--CC-cEEEeCCHHHHHHHHHHhccc
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YAD--PR-EIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g~~--~~-~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
++++.+.+++.+.+... . .+.++ ......++|+++++++ |++ ++ +|++|+|+++|+++++.++.
T Consensus 38 ~~~~~v~~a~~~~~~~~----~--~~~y~--~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~- 108 (376)
T 2dou_A 38 PPPEAPLKALAEALNDP----T--TYGYC--LKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALT- 108 (376)
T ss_dssp CCCHHHHHHHHHHTTCG----G--GSSCC--CHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhCC----C--cCCCC--CCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhc-
Confidence 35788999998887531 0 01111 1234567777777776 874 45 89999999999999999987
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCccccccc---HHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILE 157 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l~~ 157 (2602)
++||+|+++.+.|+++...+... |++++.++.+.++.+|++++++++++++++|++++|+||||.++| +++
T Consensus 109 ---~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~ 182 (376)
T 2dou_A 109 ---EPEDLLLLPEVAYPSYFGAARVA---SLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEE 182 (376)
T ss_dssp ---CTTCEEEEESSCCHHHHHHHHHT---TCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHH
T ss_pred ---CCCCEEEECCCCcHhHHHHHHHc---CCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHH
Confidence 79999999999999987766544 999999998445568999999999888999999999999999998 567
Q ss_pred HHHHHHhcCCEEEEecccccccc---c---ccC-CCCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCcc
Q psy15216 158 IGELCRSKGVIFHCDAAQAVGKI---D---INI-QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHE 228 (2602)
Q Consensus 158 I~~la~~~g~~livD~a~a~g~~---~---~dl-~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~ 228 (2602)
|+++|++||+++|+|++|+.+.. + +++ ...+.++++.|+||.+|++| +||+++++++++.+.+...
T Consensus 183 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~----- 257 (376)
T 2dou_A 183 ALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKG----- 257 (376)
T ss_dssp HHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHH-----
T ss_pred HHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHH-----
Confidence 88999999999999999976431 1 222 12345788999999888777 7999998877766654321
Q ss_pred ccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc-cChhHHH
Q psy15216 229 YGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLL 307 (2602)
Q Consensus 229 ~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~~~~~~ 307 (2602)
....+.+.....++.++|+....++++.+++++++++++.+.|.+ . +.+..+.. +....+.++. .+..++.
T Consensus 258 --~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~--~~~~~~~~---~~~~~~~~~~~~~~~~~~ 329 (376)
T 2dou_A 258 --VIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKG-V--LSLLPPRA---TMYLWGRLPEGVDDLEFG 329 (376)
T ss_dssp --HHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTT-T--SEECCCCB---SSEEEEECCTTCCHHHHH
T ss_pred --hcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-h--cCccCCCe---eEEEEEECCCCCCHHHHH
Confidence 112345666666666777643456788888999999999999977 3 55553322 2334455542 3456677
Q ss_pred HHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 308 MAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 308 ~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
..| +||.+++|..|.+. ..+++||+++. +++++++++++|++
T Consensus 330 ~~l~~~gi~v~~g~~f~~~-----------------~~~~~Ris~~~--~~~~i~~~l~~l~~ 373 (376)
T 2dou_A 330 LRLVERGVALAPGRGFGPG-----------------GKGFVRIALVR--PLEELLEAAKRIRE 373 (376)
T ss_dssp HHHHHTTEECEEGGGGCGG-----------------GTTEEEEECCS--CHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEcCchhhCCC-----------------CCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 666 79999998876421 13789999985 78999999999985
No 155
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.90 E-value=1.1e-22 Score=273.10 Aligned_cols=340 Identities=16% Similarity=0.174 Sum_probs=238.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHhcc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~-~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
||+..+++.++.+++++..... |+....+..+.....+.+++++++++++|+++ ++++||+|+|+|+..++.++.
T Consensus 104 l~~~~~~~~~~~v~~~~~~~~~----n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar 179 (497)
T 2qma_A 104 IAHLHTPPLMPAVAAEAMIAAL----NQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLAR 179 (497)
T ss_dssp CSSSCCCCBHHHHHHHHHHHHH----CCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHH
T ss_pred eEeCCCCCcHHHHHHHHHHHhh----cccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHH
Confidence 6888889999999998876654 22222233344556677778999999999965 789999999999999998853
Q ss_pred cccc---------cC------CC-EEEEcCCCCcccHHHHHHHHhCCc-EEEEeccCCCCccChHHHHhhccCC----ce
Q psy15216 80 HFYK---------KR------GK-HIITVQTEHKSVLDSIRKLENDGF-RVTYLKPKNNGLITLSQLEEKICSD----TI 138 (2602)
Q Consensus 80 ~~~~---------~~------gd-~Vlv~~~~~~s~~~~~~~~~~~G~-~v~~v~~~~~~~ld~e~l~~~i~~~----tk 138 (2602)
.... .+ |+ +|+++.++|+++..++..+.. |. +++.+++++++.+|+++|+++|+++ ++
T Consensus 180 ~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~-g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~ 258 (497)
T 2qma_A 180 DWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGL-GEKAVMTVDANADGTMDITKLDEVIAQAKAEGLI 258 (497)
T ss_dssp HHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTS-CGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCE
T ss_pred HHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCC-CcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCc
Confidence 1111 12 46 899999999999888877621 33 7999999888999999999999753 44
Q ss_pred --EEEEecccCcccccccHHHHHHHHHhcCCEEEEeccccccccccc----CCCC-CccEEEecccc-ccCCCCcEEEEE
Q psy15216 139 --LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN----IQNY-KVDLMSFSAHK-IYGPKGIGALYI 210 (2602)
Q Consensus 139 --lv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~d----l~~~-~~D~~~~S~~K-~~Gp~G~G~l~~ 210 (2602)
+|++++++|+||.+.|+++|+++|++||+++|+|++|+.+..+.+ +..+ ++|++++|+|| +++|.|+|++++
T Consensus 259 ~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~ 338 (497)
T 2qma_A 259 PFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTISCGALLV 338 (497)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEE
T ss_pred ceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcceEEEEE
Confidence 899999999999999999999999999999999999998876554 2333 67999999999 567888999999
Q ss_pred ecCC-CCcccc---eecCCCcc-cccc----ccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCce
Q psy15216 211 RRNP-RTRIEA---QIHGGGHE-YGLR----SGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEI 280 (2602)
Q Consensus 211 ~~~~-~~~l~~---~~~g~~~~-~~~~----~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~ 280 (2602)
+++. ++.+.. +..+.... .... .++..+ ...++.++++. ...++++..++..++++++.+.|.+ .+++
T Consensus 339 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~-~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~ 416 (497)
T 2qma_A 339 NDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRF-DALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRT-NDQF 416 (497)
T ss_dssp SCGGGGGGGCC--------------------CCSCCC-THHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHT-CTTE
T ss_pred eCHHHHHHhcCCchhcCCccccCCCccccCCCCCCch-hHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhh-CCCe
Confidence 8653 222211 00000000 0000 001111 12334455653 3456788999999999999999987 7899
Q ss_pred EEeCCCCCCCCceEEEEEcccC--h----hHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec-C
Q psy15216 281 YINGDMNNRIPHNLNISFNFIE--G----ESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-G 351 (2602)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~~~~~--~----~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~-~ 351 (2602)
+++.++. ..++.|.+.... . ..+...+ +|+.+.++.... ..+++|+++ +
T Consensus 417 ~~~~~~~---~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~-------------------g~~~lRis~~~ 474 (497)
T 2qma_A 417 ELLAEPS---LSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVD-------------------GKTALKFTILN 474 (497)
T ss_dssp EECSCCS---SSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEET-------------------TEEEEEEECCC
T ss_pred EEEcCCC---ceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEEC-------------------CEEEEEEEecC
Confidence 9875543 234555554321 1 1233333 354443221110 126899998 8
Q ss_pred CCCCHHHHHHHHHHHHhh
Q psy15216 352 RFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 352 ~~~t~edid~li~~L~~~ 369 (2602)
+++|++|+++++++|++.
T Consensus 475 ~~~t~edi~~~~~~l~~~ 492 (497)
T 2qma_A 475 PCLTTSDFESLLSKINML 492 (497)
T ss_dssp TTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 899999999999999864
No 156
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.90 E-value=7.8e-23 Score=263.49 Aligned_cols=310 Identities=20% Similarity=0.163 Sum_probs=235.9
Q ss_pred eeeccC--CCCCCCHHHHHHHHHHHhh----ccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q psy15216 1395 NIVFKD--ATTPIDPRVVDKMIPYLRV----QFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNN 1468 (2602)
Q Consensus 1395 ~v~L~~--~~~~~~~~v~eal~~~l~~----~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~ 1468 (2602)
.++++. ...+.++.+.+++.+.+.. ..++|..+ ..++|+++++++|+++++|++|+|+|+|++
T Consensus 28 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~-----------~~~lr~~la~~~g~~~~~i~~t~g~~~al~ 96 (360)
T 3hdo_A 28 WIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSAS-----------SQKLREVAGELYGFDPSWIIMANGSDEVLN 96 (360)
T ss_dssp SEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSS-----------CHHHHHHHHHHHTCCGGGEEEESSHHHHHH
T ss_pred eeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCc-----------hHHHHHHHHHHhCcCcceEEEcCCHHHHHH
Confidence 455542 3356789999999998876 34455431 357899999999998899999999999999
Q ss_pred HHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccc
Q psy15216 1469 LAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVI 1548 (2602)
Q Consensus 1469 ~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~ 1548 (2602)
.++.++. ++||+|+++.++|+++...+... |++++.++.+.++.+ ++++++++ ++++++++|+||||.+
T Consensus 97 ~~~~~l~----~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~--~~l~~~~~--~~~v~i~~p~nptG~~ 165 (360)
T 3hdo_A 97 NLIRAFA----AEGEEIGYVHPSYSYYGTLAEVQ---GARVRTFGLTGDFRI--AGFPERYE--GKVFFLTTPNAPLGPS 165 (360)
T ss_dssp HHHHHHC----CTTCEEEEESSSCTHHHHHHHHH---TCEEEEECBCTTSSB--TTCCSSBC--SSEEEEESSCTTTCCC
T ss_pred HHHHHHh----CCCCEEEEcCCChHHHHHHHHHC---CCEEEEeeCCCCCCH--HHHHhhcC--CCEEEEeCCCCCCCCC
Confidence 9999986 89999999999999988777766 999999998776655 55555543 5699999999999999
Q ss_pred cChHHHHHHhhhcCCEEEEeccccc--CcccccC-CCCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCCc
Q psy15216 1549 QPILEIGELCRSKGVIFHCDAAQAV--GKIDINI-QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGH 1623 (2602)
Q Consensus 1549 ~~l~~I~~ia~~~gi~vivD~a~~~--g~~~~~l-~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~ 1623 (2602)
+|+++|.++|+++|+++|+|++|+. +.....+ ...+.++++.|+||.+|++| +||+++++++++.+....
T Consensus 166 ~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~----- 240 (360)
T 3hdo_A 166 FPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIR----- 240 (360)
T ss_dssp CCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHS-----
T ss_pred cCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhC-----
Confidence 9999999999999999999999874 2111111 12345688889999887666 799999876665554332
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHH
Q psy15216 1624 EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLL 1703 (2602)
Q Consensus 1624 ~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~ 1703 (2602)
...+.+...+.++.++|+. ..++++.++++.++++++.+.|.+ . ++.+..+ . .....+.++..+..++.
T Consensus 241 ----~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~-~---~~~~~~~~~~~~~~~l~ 309 (360)
T 3hdo_A 241 ----DHYNLDRLAQAACVAALRD-QAYLSECCRRIRETREWFTTELRS-I-GYDVIPS-Q---GNYLFATPPDRDGKRVY 309 (360)
T ss_dssp ----CSCCSCHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHH-T-TCEECCC-S---SSEEEEECTTCCHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCEEcCC-C---ccEEEEECCCCCHHHHH
Confidence 1245677777777777774 345788889999999999999988 4 7766532 1 22333444444566777
Q ss_pred Hhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1704 MAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1704 ~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
..| +||.++++..... .+++|+|++ +.+|+++++++|++
T Consensus 310 ~~l~~~gi~v~~~~~~~~-------------------~~~iRis~~---~~~e~~~l~~al~~ 350 (360)
T 3hdo_A 310 DGLYARKVLVRHFSDPLL-------------------AHGMRISIG---TREEMEQTLAALKE 350 (360)
T ss_dssp HHHHHTTEECBCCCSTTT-------------------TTSEEEECC---CHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEEECCCCCC-------------------CCEEEEEcC---CHHHHHHHHHHHHH
Confidence 666 8999987654211 278999988 89999999999997
No 157
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.90 E-value=3.1e-23 Score=271.08 Aligned_cols=326 Identities=13% Similarity=0.066 Sum_probs=234.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEE-eCCHHHHHHHHHHhcc
Q psy15216 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIW-TSGATESNNLAIKGAA 79 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~-~~~Iv~-t~g~T~al~~~~~~l~ 79 (2602)
++++.+++|+.+++++.++. ++..+....+....+..+++|+++++++|++ +++|++ |+|+|+|+++++.++.
T Consensus 44 ~~~~~~~~~~~v~~a~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~ 118 (398)
T 2fyf_A 44 FGSGPSKVRLEQLQTLTTTA-----AALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLI 118 (398)
T ss_dssp CCSSSCCCCHHHHHGGGTTT-----TTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTC
T ss_pred ccCCCCCCCHHHHHHHhhcC-----CCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhc
Confidence 34566688999999887631 1111111122344567899999999999997 368998 9999999999999987
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHHHHhC--CcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHH
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRKLEND--GFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILE 157 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~--G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~ 157 (2602)
++| .+++...+|... ....+... |++++.++++++...+. .++++|++|++++++||||.++|+++
T Consensus 119 ----~~g-v~~v~~~~~~~~--~~~~~~~~~~g~~~~~v~~~~g~~~~~-----~i~~~~~~v~~~~~~nptG~~~~~~~ 186 (398)
T 2fyf_A 119 ----DKR-SLHLTYGEFSAK--FASAVSKNPFVGEPIIITSDPGSAPEP-----QTDPSVDVIAWAHNETSTGVAVAVRR 186 (398)
T ss_dssp ----SSC-EEEEECSHHHHH--HHHHHHHCTTSCCCEEEECCTTCCCCC-----CCCTTCSEEEEESEETTTTEECCCCC
T ss_pred ----CCC-eEEEeCCHHHHH--HHHHHHHhCCCCceEEEecCCCCCCCc-----cccCCCCEEEEeCcCCCcceecchHH
Confidence 677 333344444321 12223344 78888888774332332 26788999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCC-CcEEEEEecCCCCcccce---------ecCCCc
Q psy15216 158 IGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPK-GIGALYIRRNPRTRIEAQ---------IHGGGH 227 (2602)
Q Consensus 158 I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~-G~G~l~~~~~~~~~l~~~---------~~g~~~ 227 (2602)
|.++ +|+++|+|++|+.+..++++. ++|++++|+||++|++ |+|++++++++++.+.+. +..++.
T Consensus 187 i~~~---~~~~vivD~a~~~~~~~~~~~--~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 261 (398)
T 2fyf_A 187 PEGS---DDALVVIDATSGAGGLPVDIA--ETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPI 261 (398)
T ss_dssp CTTC---C-CEEEEECTTTTTTSCCCGG--GCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHH
T ss_pred hhhh---cCCeEEEEeccccCCcccCcc--cCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHH
Confidence 8887 899999999999998877664 3799999999988877 599999998876655321 111110
Q ss_pred -c----ccccccCcchhHHHHHHHHHHHHH-Hh-HHHHHHHHHHHHHHHHHHHhhccCceEEeC-CCCCCCCceEEEEEc
Q psy15216 228 -E----YGLRSGTLATHQIVGMGEAFRLAR-IE-MKEELKRILFLQKRLYNGLMESIEEIYING-DMNNRIPHNLNISFN 299 (2602)
Q Consensus 228 -~----~~~~~gt~~~~~~~al~~al~~~~-~~-~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~-~~~~~~~~~~~~~~~ 299 (2602)
. .....++++..+++++.++++... .+ +++..+++.++++++.+.|.+ ++++++.. .+..+.+.++.+.++
T Consensus 262 ~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~ 340 (398)
T 2fyf_A 262 AVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQE-RPYTTPFVTDPGLRSQVVGTIDFV 340 (398)
T ss_dssp HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH-STTEEESCCSGGGBCSSEEEEEEC
T ss_pred HhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH-cCCceeccCChhhcCCcEEEEECC
Confidence 0 123457888888888889998544 33 889999999999999999988 67898874 222223335666664
Q ss_pred -ccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 300 -FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 300 -~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+.+..++.+.| +||.+++|... + ..+++|||++.+++++|+++++++|++.
T Consensus 341 ~~~~~~~l~~~L~~~gI~v~~g~~~-------------~------~~~~iRis~~~~~t~e~i~~~~~~l~~~ 394 (398)
T 2fyf_A 341 DDVDAGTVAKILRANGIVDTEPYRK-------------L------GRNQLRVAMFPAVEPDDVSALTECVDWV 394 (398)
T ss_dssp TTSCHHHHHHHHHHTTCBCCSCCTT-------------T------CSSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCcEEecCccc-------------C------CCCEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 34667777777 78988765211 1 1378999999999999999999999863
No 158
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.90 E-value=1.1e-23 Score=276.48 Aligned_cols=319 Identities=14% Similarity=0.111 Sum_probs=240.2
Q ss_pred CCCHHHHHHHHHHHhhh--cCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC--C-CcEEEeCCHHHHHHHHHHhccccc
Q psy15216 8 PIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--P-REIIWTSGATESNNLAIKGAAHFY 82 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~--~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~--~-~~Iv~t~g~T~al~~~~~~l~~~~ 82 (2602)
++++.+++++.+.+... ..++. .....+..+++++++++++|.+ + ++|++|+|+++|++.++.++.
T Consensus 53 ~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~--- 123 (407)
T 3nra_A 53 EPTPGAFDLFSAGVQSGGVQAYTE------YRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATV--- 123 (407)
T ss_dssp CCCTTHHHHHHHHHHHTHHHHSCC------TTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTC---
T ss_pred CCcHHHHHHHHHHHhcCCCCCcCC------CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhC---
Confidence 67889999999988642 11211 1122457788899999999974 3 689999999999999999987
Q ss_pred ccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEecc------CCCCccChHHHHhhccCCceEEEEecccCccccccc--
Q psy15216 83 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP------KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP-- 154 (2602)
Q Consensus 83 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~------~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~-- 154 (2602)
++||+|+++.+.|+++...++.. |++++.++. ++++.+|+++|++++++++++|++++|+||||.++|
T Consensus 124 -~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 199 (407)
T 3nra_A 124 -ARGDKVAIVQPDYFANRKLVEFF---EGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAE 199 (407)
T ss_dssp -CTTCEEEEEESCCTHHHHHHHHT---TCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHH
T ss_pred -CCCCEEEEcCCcccchHHHHHHc---CCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHH
Confidence 89999999999999987666655 999999998 356789999999999989999999999999999999
Q ss_pred -HHHHHHHHHhcCCEEEEecccccccc----cccC-----CCCCccEEEeccccccCCCC--cEEEEEecCCCCccccee
Q psy15216 155 -ILEIGELCRSKGVIFHCDAAQAVGKI----DINI-----QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQI 222 (2602)
Q Consensus 155 -l~~I~~la~~~g~~livD~a~a~g~~----~~dl-----~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~ 222 (2602)
+++|+++|++||+++|+|++|+.+.. ...+ ...+.++++.|+||.+|++| +||+++++++++.+....
T Consensus 200 ~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~ 279 (407)
T 3nra_A 200 EIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQ 279 (407)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHH
Confidence 88999999999999999999976321 1122 12446699999999888776 799999887776665432
Q ss_pred cCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--
Q psy15216 223 HGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-- 300 (2602)
Q Consensus 223 ~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-- 300 (2602)
. ....+++.....++.++++....++++..++.+++++++.+.|.+ ++++.+..+... ....+.++.
T Consensus 280 ~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~---~~~~~~~~~~~ 348 (407)
T 3nra_A 280 A-------IVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRG-CEGVFARTPQAG---SYLFPRLPKLA 348 (407)
T ss_dssp H-------HHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHT-STTCBCCCCSBS---SEECCBCCCBS
T ss_pred h-------hhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc-CCCceeccCCee---EEEEEeCCCCC
Confidence 1 112234445555554555422244678888889999999999987 678776544321 223333332
Q ss_pred cChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 301 IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 301 ~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.+..++...| +||.+++|..|.+. ..+++||+++. +++++++++++|++.
T Consensus 349 ~~~~~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRis~~~--~~~~i~~~~~~l~~~ 401 (407)
T 3nra_A 349 VAPAEFVKILRLQAGVVVTPGTEFSPH-----------------TADSVRLNFSQ--DHEAAVAAARRIVTL 401 (407)
T ss_dssp SCHHHHHHHHHHHHCEECEEGGGTCTT-----------------CTTBEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCCC-----------------CCCEEEEEeCC--CHHHHHHHHHHHHHH
Confidence 3556777766 49999999887642 23889999984 899999999999863
No 159
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.90 E-value=6.9e-23 Score=268.14 Aligned_cols=319 Identities=13% Similarity=0.092 Sum_probs=234.2
Q ss_pred CCCHHHHHHHHHHHhhh-cCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhccccccc
Q psy15216 8 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFYKK 84 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~-~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g--~~~~~Iv~t~g~T~al~~~~~~l~~~~~~ 84 (2602)
++|+.+.+++.+.+... ..++ .+ ..++.+.+.+++++.+| +++++|++|+|+++|+++++.++. +
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~y~------~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~----~ 111 (399)
T 1c7n_A 44 KNPPELIEGLKKYLDETVLGYT------GP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFT----K 111 (399)
T ss_dssp CCCHHHHHHHHHHHHHCCCSSB------CC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC----C
T ss_pred CCCHHHHHHHHHHHhcCCCCCC------CC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhc----C
Confidence 56889999999988641 1111 11 22333344444444457 567899999999999999999987 7
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccC-CC--CccChHHHHhhcc-CCceEEEEecccCccccccc---HHH
Q psy15216 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NN--GLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQP---ILE 157 (2602)
Q Consensus 85 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-~~--~~ld~e~l~~~i~-~~tklv~i~~~~npTG~~~~---l~~ 157 (2602)
+||+|+++.+.|+++...+.. .|++++.++.+ ++ +.+|+++|+++++ +++++|++++|+||||.++| +++
T Consensus 112 ~gd~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~ 188 (399)
T 1c7n_A 112 PGDGVIIITPVYYPFFMAIKN---QERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQK 188 (399)
T ss_dssp TTCEEEECSSCCTHHHHHHHT---TTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred CCCEEEEcCCCcHhHHHHHHH---cCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHH
Confidence 899999999999998766554 49999999875 32 3589999999998 78999999999999999999 889
Q ss_pred HHHHHHhcCCEEEEeccccccc----ccccCCCC-----CccEEEeccccccCCCC--cEEEEEec-CCCCcccceecCC
Q psy15216 158 IGELCRSKGVIFHCDAAQAVGK----IDINIQNY-----KVDLMSFSAHKIYGPKG--IGALYIRR-NPRTRIEAQIHGG 225 (2602)
Q Consensus 158 I~~la~~~g~~livD~a~a~g~----~~~dl~~~-----~~D~~~~S~~K~~Gp~G--~G~l~~~~-~~~~~l~~~~~g~ 225 (2602)
|+++|++||+++|+|++|+... .+.++..+ +.++++.|+||.+|++| +||+++++ ++++.+.+....
T Consensus 189 i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~- 267 (399)
T 1c7n_A 189 IKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDA- 267 (399)
T ss_dssp HHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhh-
Confidence 9999999999999999997632 12233222 34688999999888777 79999874 466666543321
Q ss_pred CccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--cCh
Q psy15216 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEG 303 (2602)
Q Consensus 226 ~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~--~~~ 303 (2602)
+..++++.....++.++++....++++..+++.++++++.+.|.+.+|++.+..+.. +...++.++. .+.
T Consensus 268 -----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 339 (399)
T 1c7n_A 268 -----TSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEG---TYLQWIDFRALKMDH 339 (399)
T ss_dssp -----TTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSB---SSEEEEECGGGCCCH
T ss_pred -----cccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCc---eEEEEEEcccCCCCH
Confidence 123356777777777777643456788888999999999999976356776654322 2233455553 356
Q ss_pred hHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 304 ESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 304 ~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++...| +||.+++|..|.+. ..+++||+++. .++++++++++|++.
T Consensus 340 ~~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRis~~~--~~~~l~~~l~~l~~~ 389 (399)
T 1c7n_A 340 KAMEEFMIHKAQIFFDEGYIFGDG-----------------GIGFERINLAA--PSSVIQESLERLNKA 389 (399)
T ss_dssp HHHHHHHHHTTCCCCEEGGGGCGG-----------------GTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEeCccccCCC-----------------CCCeEEEEecc--CHHHHHHHHHHHHHH
Confidence 6676666 59999988876421 13789999985 378999999999863
No 160
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.90 E-value=3.8e-23 Score=267.56 Aligned_cols=305 Identities=17% Similarity=0.148 Sum_probs=230.8
Q ss_pred CCCHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHHHhhhh
Q psy15216 1404 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGAAH 1476 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g------~~~~~iv~t~gaT~al~~al~~l~~ 1476 (2602)
+.++.+.+++.+.++.. ..++.. ....++|+.++++++ +++++|++|+|+++|+..++.++.
T Consensus 42 ~~~~~v~~a~~~~~~~~~~~y~~~----------~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~- 110 (370)
T 2z61_A 42 NTPKPIVDEGIKSLKEGKTHYTDS----------RGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSII- 110 (370)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCT----------TCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHcCccCCCCC----------CCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhc-
Confidence 35788999998888652 222221 113567777777774 577899999999999999999986
Q ss_pred hhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHH
Q psy15216 1477 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 1556 (2602)
Q Consensus 1477 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ 1556 (2602)
++||+|++++++|+++...+... |++++.++ +|+++|++++++++++|++++|+||||.++|++ |.+
T Consensus 111 ---~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~v~------~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~-l~~ 177 (370)
T 2z61_A 111 ---DDGDEVLIQNPCYPCYKNFIRFL---GAKPVFCD------FTVESLEEALSDKTKAIIINSPSNPLGEVIDRE-IYE 177 (370)
T ss_dssp ---CTTCEEEEESSCCTHHHHHHHHT---TCEEEEEC------SSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH-HHH
T ss_pred ---CCCCEEEEeCCCchhHHHHHHHc---CCEEEEeC------CCHHHHHHhcccCceEEEEcCCCCCcCcccCHH-HHH
Confidence 79999999999999987766544 99999887 689999999999999999999999999999999 999
Q ss_pred HhhhcCCEEEEecccccCcc---cccCC----CCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCCccccC
Q psy15216 1557 LCRSKGVIFHCDAAQAVGKI---DINIQ----NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGL 1627 (2602)
Q Consensus 1557 ia~~~gi~vivD~a~~~g~~---~~~l~----~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~ 1627 (2602)
+|++||+++|+|++|+.+.. +.++. ..+.|+++.|+||.+|++| +||+++++++++.+.+...++
T Consensus 178 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~------ 251 (370)
T 2z61_A 178 FAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNL------ 251 (370)
T ss_dssp HHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHH------
T ss_pred HHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhc------
Confidence 99999999999999986543 22222 2357899999999888888 899999987666665433211
Q ss_pred CCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc
Q psy15216 1628 RSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI 1706 (2602)
Q Consensus 1628 ~~gt~~~~~~~al~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1706 (2602)
.++.+...+.++.++|+. ...++++.++++.++++++.+.|.+ . ++.+..+.. .....+.++. +..++...|
T Consensus 252 -~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~~~-~~~~~~~~l 324 (370)
T 2z61_A 252 -FISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKD-F-GWEVNNPIG---AYYVFPNIGE-DGREFAYKL 324 (370)
T ss_dssp -TSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCBCCCCCB---TTEECCBCSS-CHHHHHHHH
T ss_pred -ccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH-c-CCeecCCCc---ceEEEEecCC-CHHHHHHHH
Confidence 235666667777677764 4556788889999999999999987 4 665543221 1112222332 455666555
Q ss_pred ---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1707 ---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1707 ---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
+||.+++|..|... ..+++|++++ ++.+++++++++|++
T Consensus 325 ~~~~gi~v~~g~~f~~~-----------------~~~~~Ri~~~--~~~~~i~~~~~~l~~ 366 (370)
T 2z61_A 325 LKEKFVALTPGIGFGSK-----------------GKNYIRISYA--NSYENIKEGLERIKE 366 (370)
T ss_dssp HHHHCEECEEGGGGCGG-----------------GSSBEEEECC--SCHHHHHHHHHHHHH
T ss_pred HHhCCEEEeCchhhCCC-----------------CCCEEEEEEe--CCHHHHHHHHHHHHH
Confidence 59999998876421 1378999999 699999999999986
No 161
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.90 E-value=8.4e-23 Score=267.23 Aligned_cols=316 Identities=14% Similarity=0.124 Sum_probs=227.0
Q ss_pred CCCHHHHHHHHHHHhh-----hcCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 8 PIDPRVVDKMIPYLRV-----QFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~-----~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g--~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
++++.+.+++.+.+.. ...++.. .....+.+.+.+++.+.+| +++++|++|+|+++|+++++.++.
T Consensus 48 ~~~~~v~~a~~~~~~~~~~~~~~~y~~~------~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~- 120 (398)
T 3ele_A 48 PAPQIVNDTIKELVTDYDSVALHGYTSA------QGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALT- 120 (398)
T ss_dssp CCCHHHHHHHHHHHHHSCHHHHHSCCCT------TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhcCCccccCCcCCC------CCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHc-
Confidence 5788999999998865 2233211 1112344555555555556 577899999999999999999987
Q ss_pred ccccCC-CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHhhccCCceEEEEecccCccccccc---H
Q psy15216 81 FYKKRG-KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (2602)
Q Consensus 81 ~~~~~g-d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l 155 (2602)
++| |+|+++.|.|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++| +
T Consensus 121 ---~~g~d~vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l 194 (398)
T 3ele_A 121 ---SDAYDEFITIAPYFPEYKVFVNAA---GARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETI 194 (398)
T ss_dssp ---CSTTCEEEEESSCCTHHHHHHHHT---TCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHH
T ss_pred ---CCCCCEEEEeCCCchhhHHHHHHc---CCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHH
Confidence 799 99999999999987766654 99999999875 5689999999999999999999999999999999 5
Q ss_pred HHHHHHHHh------cCCEEEEeccccccc-----ccccCCCCCccEEEeccccccCCCC--cEEEEEecCCCCc--ccc
Q psy15216 156 LEIGELCRS------KGVIFHCDAAQAVGK-----IDINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTR--IEA 220 (2602)
Q Consensus 156 ~~I~~la~~------~g~~livD~a~a~g~-----~~~dl~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~--l~~ 220 (2602)
++|+++|++ ||+++|+|++|+... .+......+.++++.|+||.+|++| +||+++++++.+. +..
T Consensus 195 ~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 274 (398)
T 3ele_A 195 KKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYA 274 (398)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHH
T ss_pred HHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHH
Confidence 667788998 999999999997522 2222233456789999999988777 8999999876652 111
Q ss_pred eecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc
Q psy15216 221 QIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF 300 (2602)
Q Consensus 221 ~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~ 300 (2602)
..... .......+++.....++..+++. . ...+++.++++++.+.|.+ . ++.+..+.. .....+.++.
T Consensus 275 ~~~~~--~~~~~~~~~~~~~~~a~~~~l~~---~--~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~~~ 342 (398)
T 3ele_A 275 AVCGA--GRALGYVCAPSLFQKMIVKCQGA---T--GDINAYKENRDLLYEGLTR-I-GYHCFKPDG---AFYMFVKALE 342 (398)
T ss_dssp HHHHH--HHHTTCCCSCHHHHHHHTTCTTC---C--CCHHHHHHHHHHHHHHHHH-H-TCCEECCSB---SSEEEEECSS
T ss_pred HHHHH--hhhccccCCCHHHHHHHHHHhcC---H--HHHHHHHHHHHHHHHHHHH-c-CCeecCCCe---eEEEEEEcCC
Confidence 11000 00011223444444444333331 1 1356777888888888877 3 666665433 2334455555
Q ss_pred cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 301 IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 301 ~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.+..++.+.| +||.+++|..|..+ +++||+++ ++++++++++++|++.
T Consensus 343 ~~~~~~~~~l~~~gi~v~~g~~~~~~-------------------~~iRis~~--~~~e~i~~~l~~l~~~ 392 (398)
T 3ele_A 343 DDSNAFCEKAKEEDVLIVAADGFGCP-------------------GWVRISYC--VDREMIKHSMPAFEKI 392 (398)
T ss_dssp SCHHHHHHHHHTTTEECEESGGGTCT-------------------TEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCEEEeCccccCCC-------------------CeEEEEec--CCHHHHHHHHHHHHHH
Confidence 5666777766 79999999877542 79999997 6999999999999863
No 162
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.90 E-value=1.1e-23 Score=227.82 Aligned_cols=126 Identities=43% Similarity=0.682 Sum_probs=121.9
Q ss_pred eeccccccceEeeeccEEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCCCCCcc
Q psy15216 1010 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 1089 (2602)
Q Consensus 1010 ~~dv~~~~~gi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~ 1089 (2602)
+.||+|+|||+++.+|.|.+|||||++||+++++.|+|..|||+.+.|.|||||+..+.+|.+||+|.|+|+||+|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEECCCeeEEEEEEEecCCceEEEEEecCCCCCHHHHHhhh
Q psy15216 1090 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKNGA 1135 (2602)
Q Consensus 1090 ~i~v~f~~d~~g~l~v~a~~~~~g~~~~~~~~~~~~l~~~~i~~~~ 1135 (2602)
+|+|+|+||.||+|+|+|+++.||++..++|..+.+||++||++|+
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~Ls~~ei~~~~ 127 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQIENMI 127 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSSSSCHHHHHHHH
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999889999999986
No 163
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.90 E-value=9.8e-24 Score=228.55 Aligned_cols=139 Identities=39% Similarity=0.606 Sum_probs=125.9
Q ss_pred eeccccccceEeeeccEEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCCCCCcc
Q psy15216 1010 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 1089 (2602)
Q Consensus 1010 ~~dv~~~~~gi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~ 1089 (2602)
+.||+|+|||+++.+|.|.+|||||++||+++++.|+|..|+|+.+.|.|||||+..+.+|..||+|.|+|+||+|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEECCCeeEEEEEEEecCCceEEEEEecCCC-CCHHHHHhhhhccccCCCchhHHHH
Q psy15216 1090 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYN-MNLDEIKNGAIFNENSGISLCDALL 1150 (2602)
Q Consensus 1090 ~i~v~f~~d~~g~l~v~a~~~~~g~~~~~~~~~~~~-l~~~~i~~~~~~~~~~g~~~~~~~~ 1150 (2602)
+|+|+|+||.||+|+|+|+++.||++.+++|..+.+ ||++||++|+ ++++.+.--+...
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~--~~a~~~~~~D~~~ 141 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMV--HEAKQFEKEDGEQ 141 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHH--HHHHHTHHHHHHH
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHH--HHHHHHHHhhHHH
Confidence 999999999999999999999999999999998866 9999999987 6666554444443
No 164
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.90 E-value=1.4e-22 Score=267.97 Aligned_cols=329 Identities=13% Similarity=0.128 Sum_probs=238.9
Q ss_pred CCCCCC-CCCHHHHHHHHHHHhh----hcCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCC-cEEEeCCHHHHHHH
Q psy15216 2 DYSATT-PIDPRVVDKMIPYLRV----QFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPR-EIIWTSGATESNNL 73 (2602)
Q Consensus 2 d~a~~~-~~p~~v~~a~~~~l~~----~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g--~~~~-~Iv~t~g~T~al~~ 73 (2602)
+++... ++++.+.+++.+.+.. ...++.. .....+.+.+.+++.+.+| ++++ +|++|+|+++|+++
T Consensus 43 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~------~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~ 116 (429)
T 1yiz_A 43 GQGFPDYHAPKYALNALAAAANSPDPLANQYTRG------FGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYA 116 (429)
T ss_dssp CSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCS------SCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHhccccCccCCCCC------CCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHH
Confidence 334333 5688999999998864 1222211 1112233344444444457 4678 99999999999999
Q ss_pred HHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC----------CCccChHHHHhhccCCceEEEEe
Q psy15216 74 AIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN----------NGLITLSQLEEKICSDTILVSVM 143 (2602)
Q Consensus 74 ~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~----------~~~ld~e~l~~~i~~~tklv~i~ 143 (2602)
++.++. ++||+|+++.+.|+++...+.. .|++++.++.++ ++.+|+++|++++++++++|+++
T Consensus 117 ~~~~~~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~ 189 (429)
T 1yiz_A 117 TIQGHV----DEGDEVIIIEPFFDCYEPMVKA---AGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIIN 189 (429)
T ss_dssp HHHHHC----CTTCEEEEEESCCTTHHHHHHH---TTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEE
T ss_pred HHHHhc----CCCCEEEEcCCCchhHHHHHHH---cCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEEC
Confidence 999987 7999999999999998776654 499999998865 35689999999999999999999
Q ss_pred cccCccccccc---HHHHHHHHHhcCCEEEEeccccccc------ccc-cCC-CCCccEEEeccccccCCCC--cEEEEE
Q psy15216 144 LVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGK------IDI-NIQ-NYKVDLMSFSAHKIYGPKG--IGALYI 210 (2602)
Q Consensus 144 ~~~npTG~~~~---l~~I~~la~~~g~~livD~a~a~g~------~~~-dl~-~~~~D~~~~S~~K~~Gp~G--~G~l~~ 210 (2602)
+|+||||.++| +++|.++|++||+++|+|++|+... .++ .+. ..+.|+++.|+||.+|++| +||+++
T Consensus 190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~ 269 (429)
T 1yiz_A 190 TPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYG 269 (429)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEES
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEe
Confidence 99999999996 8899999999999999999997421 122 222 3567999999999999888 899999
Q ss_pred ecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHH-----H--HHhHHHHHHHHHHHHHHHHHHHhhccCceEEe
Q psy15216 211 RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-----A--RIEMKEELKRILFLQKRLYNGLMESIEEIYIN 283 (2602)
Q Consensus 211 ~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~-----~--~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~ 283 (2602)
++++++.+.+... ...++.+.+...++.++|+. . ..++++.+++++++++++.+.|.+ . ++.+.
T Consensus 270 ~~~~~~~l~~~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~ 340 (429)
T 1yiz_A 270 PEALLKNLQMVHQ-------NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAE-V-GMNPT 340 (429)
T ss_dssp CHHHHHHHHHHHH-------TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHH-H-TCEEE
T ss_pred CHHHHHHHHHHHh-------hcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHh-C-CCccc
Confidence 8877666654321 12345666667777777775 3 445788889999999999999987 3 67765
Q ss_pred CCCCCCCCceEEEEEccc-------------ChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEE
Q psy15216 284 GDMNNRIPHNLNISFNFI-------------EGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (2602)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (2602)
.+.. ..++.+.++.. +..++...| +||.+++|..|.... ..+ ...+++|
T Consensus 341 ~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~--------~~~----~~~~~iR 405 (429)
T 1yiz_A 341 VPQG---GYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEP--------NKH----LGEDFVR 405 (429)
T ss_dssp ECSB---SSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGG--------GGG----GTTTEEE
T ss_pred CCCc---ceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCc--------ccC----CCCCeEE
Confidence 4422 23444555432 234565544 699999987664320 000 0137999
Q ss_pred EecCCCCCHHHHHHHHHHHHhh
Q psy15216 348 FTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 348 is~~~~~t~edid~li~~L~~~ 369 (2602)
|+++ ++++++++++++|++.
T Consensus 406 is~~--~~~e~i~~~l~~l~~~ 425 (429)
T 1yiz_A 406 YCFF--KKDENLQKAAEILRKW 425 (429)
T ss_dssp EECC--SCHHHHHHHHHHHHHH
T ss_pred EEec--CCHHHHHHHHHHHHHh
Confidence 9998 4899999999999863
No 165
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.90 E-value=1.9e-22 Score=259.07 Aligned_cols=280 Identities=18% Similarity=0.178 Sum_probs=216.3
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCC-CEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC
Q psy15216 1439 IEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG-KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN 1517 (2602)
Q Consensus 1439 ~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~g-d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~ 1517 (2602)
..++|+++++++++++++|++|+|++++++.++.++. ++| |+|+++.|+|+++...+... |++++.++.+++
T Consensus 60 ~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~----~~g~d~Vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~ 132 (356)
T 1fg7_A 60 PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFC----EPGKDAILYCPPTYGMYSVSAETI---GVECRTVPTLDN 132 (356)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHC----CTTTCEEEECSSSCTHHHHHHHHH---TCEEEECCCCTT
T ss_pred HHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHh----CCCCCEEEEeCCChHHHHHHHHHc---CCEEEEeeCCCC
Confidence 4678999999999988999999999999999999986 799 99999999999988777666 999999998877
Q ss_pred CCcChhHHHhhccCCceEEEEeccccccccccChHHH---HHHhhhcCCEEEEecccccCccc---ccC-CCCCccEEEE
Q psy15216 1518 GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI---GELCRSKGVIFHCDAAQAVGKID---INI-QNYKVDLMSF 1590 (2602)
Q Consensus 1518 ~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I---~~ia~~~gi~vivD~a~~~g~~~---~~l-~~~~~D~~v~ 1590 (2602)
+.+|+++++++++ ++++|++++|+||||.++|.++| +++|+ ||+++|+|++|+..... .++ ...+.++++.
T Consensus 133 ~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~ 210 (356)
T 1fg7_A 133 WQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILR 210 (356)
T ss_dssp SCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEE
T ss_pred CCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEe
Confidence 7899999999998 89999999999999999995555 55566 99999999999743311 222 3345678999
Q ss_pred ccccccCCCc--eEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q psy15216 1591 SAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYN 1667 (2602)
Q Consensus 1591 S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~-~~~~~~~~~~~~l~~~l~~ 1667 (2602)
|+||.+|++| +||+++++++++.+..... ..+.+...+.++.++|+... .++++..+++.++++++.+
T Consensus 211 s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 281 (356)
T 1fg7_A 211 TLSKAFALAGLRCGFTLANEEVINLLMKVIA---------PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIA 281 (356)
T ss_dssp ESSSTTCCGGGCCEEEEECHHHHHHHHHHSC---------SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHhhcCchhhhEEEEeCHHHHHHHHHhcC---------CCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888 7999998876665544321 12456666666656665321 2367888889999999999
Q ss_pred HHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEcc-ccccCCCCCChhHHHHHcCCCccccCCeEEE
Q psy15216 1668 GLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSS-GSACTSASLEPSYVLRALGCNDELAHSSIRF 1744 (2602)
Q Consensus 1668 ~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRl 1744 (2602)
.|.+ .+++....+.. .....+.++ +..++...| +||.+++ |..|... +++||
T Consensus 282 ~L~~-~~~~~~~~~~~---~~~~~~~~~--~~~~l~~~L~~~gI~v~~~g~~~~~~-------------------~~iRi 336 (356)
T 1fg7_A 282 ALKE-IPCVEQVFDSE---TNYILARFK--ASSAVFKSLWDQGIILRDQNKQPSLS-------------------GCLRI 336 (356)
T ss_dssp HHHH-STTEEEECCCS---SSEEEEEET--THHHHHHHHHHTTEECEECTTSTTCT-------------------TEEEE
T ss_pred HHHh-CCCceEECCCC---CeEEEEECC--CHHHHHHHHHHCCEEEEECCCCCCCC-------------------CeEEE
Confidence 9987 66543332322 233334443 556666666 8999998 7665432 68999
Q ss_pred ecCCCCCHHHHHHHHHHHHH
Q psy15216 1745 TIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1745 s~~~~~t~edid~li~~L~~ 1764 (2602)
|++ +.+|+++++++|++
T Consensus 337 s~~---~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 337 TVG---TREESQRVIDALRA 353 (356)
T ss_dssp ECC---CHHHHHHHHHHHHT
T ss_pred EeC---CHHHHHHHHHHHHh
Confidence 997 68999999999986
No 166
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.90 E-value=2.3e-22 Score=259.36 Aligned_cols=313 Identities=17% Similarity=0.142 Sum_probs=240.0
Q ss_pred eeeeccC--CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q psy15216 1394 TNIVFKD--ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAI 1471 (2602)
Q Consensus 1394 ~~v~L~~--~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al 1471 (2602)
..+.++. +..+.++.+.+++.+.++....+|+. ...++|++++++++++++++++|+|+|+|++.++
T Consensus 27 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~-----------~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~ 95 (361)
T 3ftb_A 27 ELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDV-----------NYRRLNKSIENYLKLKDIGIVLGNGASEIIELSI 95 (361)
T ss_dssp -CEETTCCCCTTCSCHHHHTTHHHHHHGGGSCCCT-----------TCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCc-----------cHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHH
Confidence 3455542 23456889999999988876556543 1468899999999998899999999999999998
Q ss_pred HhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccC-
Q psy15216 1472 KGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP- 1550 (2602)
Q Consensus 1472 ~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~- 1550 (2602)
.++ |+|+++.++|+++...+... |++++.++.++++.++++++++++++ +++|++++|+||||.++|
T Consensus 96 ~~~--------d~vi~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~ 163 (361)
T 3ftb_A 96 SLF--------EKILIIVPSYAEYEINAKKH---GVSVVFSYLDENMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINK 163 (361)
T ss_dssp TTC--------SEEEEEESCCTHHHHHHHHT---TCEEEEEECCTTSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCH
T ss_pred HHc--------CcEEEecCChHHHHHHHHHc---CCeEEEeecCcccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCH
Confidence 765 89999999999987766655 99999999988778899999999998 999999999999999998
Q ss_pred --hHHHHHHhhhcCCEEEEecccccCccc-----ccC-CCCCccEEEEccccccCCCc--eEEEE-EecCCCCccccccc
Q psy15216 1551 --ILEIGELCRSKGVIFHCDAAQAVGKID-----INI-QNYKVDLMSFSAHKIYGPKG--IGALY-IRRNPRTRIEAQIH 1619 (2602)
Q Consensus 1551 --l~~I~~ia~~~gi~vivD~a~~~g~~~-----~~l-~~~~~D~~v~S~~K~~gp~G--~G~l~-~~~~~~~~l~~~~~ 1619 (2602)
+++|+++|++||+++|+|++|+..... ... ...+..+++.|+||.+|++| +|+++ .++++.+.+....
T Consensus 164 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~- 242 (361)
T 3ftb_A 164 EKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQ- 242 (361)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTS-
T ss_pred HHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhC-
Confidence 666778888999999999998743321 111 12234577889999888766 79988 5655554443321
Q ss_pred cCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEE-EeCCCCCCCCceEEEEEecCC
Q psy15216 1620 GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIY-INGDMNNRIPHNLNISFNFIE 1698 (2602)
Q Consensus 1620 g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~-i~~~~~~~~~~~~~~~~~~~~ 1698 (2602)
..++++...+.++.++|+. ..++++.++++.++++++.+.|.+ .+++. +..+. .....+.++..+
T Consensus 243 --------~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~----~~~~~~~~~~~~ 308 (361)
T 3ftb_A 243 --------NPWNINCFAEMAAINCLKD-TNYIEESLLWIKKERKRFIEELNK-IGFIKRVFSPH----ANFVLCRLENIS 308 (361)
T ss_dssp --------CTTCSCHHHHHHHHHTSSC-HHHHHHHHHHHHHHHHHHHHHHHH-SSSEEEEECCS----SSEEEEEESSSC
T ss_pred --------CCCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHh-CCCCceecCCC----CeEEEEEcCCCC
Confidence 1346777777777777763 355788889999999999999987 78887 66432 223445555445
Q ss_pred cHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1699 GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1699 ~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
..++...| +||.+++|..|... ..+++|++++ +.+++++++++|++
T Consensus 309 ~~~l~~~l~~~gi~v~~g~~~~~~-----------------~~~~iRis~~---~~~~~~~l~~~l~~ 356 (361)
T 3ftb_A 309 GEKLYDSLLKEDIVIRRCCNFIGL-----------------DDSFVRFAIK---DEKKNTKFLRALKG 356 (361)
T ss_dssp HHHHHHHHHTTTEECEECTTSTTC-----------------CTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEeeCccCCCC-----------------CCCEEEEEcC---CHHHHHHHHHHHHH
Confidence 66777666 79999999877532 1389999987 88999999999986
No 167
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.90 E-value=5.1e-23 Score=267.27 Aligned_cols=308 Identities=14% Similarity=0.095 Sum_probs=221.9
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHH-HHhCCc
Q psy15216 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (2602)
Q Consensus 33 ~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~ 111 (2602)
|.+++...+..+++++++|+++|++ ++++++|+++|+++++.++. ++||+|+++.++|+++...+.. +++.|+
T Consensus 74 ~~y~r~~~p~~~~le~~lA~l~g~~--~~i~~ssGt~Ai~~al~~l~----~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~ 147 (415)
T 2fq6_A 74 LFYGRRGTLTHFSLQQAMCELEGGA--GCVLFPCGAAAVANSILAFI----EQGDHVLMTNTAYEPSQDFCSKILSKLGV 147 (415)
T ss_dssp CCCTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTC----CTTCEEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred ccccCCCCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHh----CCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence 4455445567889999999999975 56667889999999999887 7999999999999998877754 466799
Q ss_pred EEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHh--cCCEEEEecccccccccccCCCCCc
Q psy15216 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS--KGVIFHCDAAQAVGKIDINIQNYKV 189 (2602)
Q Consensus 112 ~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~--~g~~livD~a~a~g~~~~dl~~~~~ 189 (2602)
++++++.+ |+++|+++++++|++|++++|+||||.+.|+++|+++|++ +|+++++|++|+.+.....+ .+++
T Consensus 148 ~v~~v~~~-----d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~-~~g~ 221 (415)
T 2fq6_A 148 TTSWFDPL-----IGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL-DFGI 221 (415)
T ss_dssp EEEEECTT-----CGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG-GGTC
T ss_pred EEEEECCC-----CHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcc-ccCC
Confidence 99999754 8999999999999999999999999999999999999999 99999999999866432222 3678
Q ss_pred cEEEeccccccCCCC---cEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q psy15216 190 DLMSFSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ 266 (2602)
Q Consensus 190 D~~~~S~~K~~Gp~G---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~ 266 (2602)
|++++|+||++|++| .|+++.++++++.+..... ...++++....+.+..+++. +....++..+++
T Consensus 222 Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~-------~~G~~~~~~~a~~~~~~l~~----l~~r~~~~~~n~ 290 (415)
T 2fq6_A 222 DVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAY-------LMGQMVDADTAYITSRGLRT----LGVRLRQHHESS 290 (415)
T ss_dssp SEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHH-------HTTCCCCHHHHHHHHHHHHH----HHHHHHHHHHHH
T ss_pred eEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHH-------hcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHH
Confidence 999999999888877 6999998876555543221 11122333323333334432 344455556667
Q ss_pred HHHHHHHhhccCceEEe-CCC--C-----------CCCCceEEEEEccc----ChhHHHHHh--CCeEEcccccCCCCCC
Q psy15216 267 KRLYNGLMESIEEIYIN-GDM--N-----------NRIPHNLNISFNFI----EGESLLMAI--KDIAVSSGSACTSASL 326 (2602)
Q Consensus 267 ~~l~~~L~~~~~g~~l~-~~~--~-----------~~~~~~~~~~~~~~----~~~~~~~~L--~gI~v~~g~~~~~~~~ 326 (2602)
..+.+.|.+ .|.+.-+ -|. . ...+.++.|.+++. +...++..| .++.++.|..|+....
T Consensus 291 ~~l~~~L~~-~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~ 369 (415)
T 2fq6_A 291 LKVAEWLAE-HPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILA 369 (415)
T ss_dssp HHHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEE
T ss_pred HHHHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEe
Confidence 777777766 4554321 111 0 12355667777652 345566665 4678888888765311
Q ss_pred -ChHHHH-----HHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 327 -EPSYVL-----RALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 327 -~~~~~~-----~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
.|.... ..+|+. ++.||+|+|.++++++++.+.++|++
T Consensus 370 ~~p~~~s~~~~~~~~g~~----~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 370 NQPEHIAAIRPQGEIDFS----GTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp ECHHHHHTTCTTCCCCCC----SCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred cCCCccccccchhhcCCC----CCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 121111 124443 48999999999999999999999974
No 168
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.90 E-value=5.5e-23 Score=269.04 Aligned_cols=314 Identities=13% Similarity=0.067 Sum_probs=235.4
Q ss_pred CCCHHHHHHHHHHHhh--hcCCCCCCCcchhhhHHHHHHHHHHHHHHHh----CCC--C-CcEEEeCCHHHHHHHHHHhc
Q psy15216 8 PIDPRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YAD--P-REIIWTSGATESNNLAIKGA 78 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~--~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g~~--~-~~Iv~t~g~T~al~~~~~~l 78 (2602)
++++.+.+++.+.+.. ...++.. ....++|+++++++ |++ + ++|++|+|+++|+++++.++
T Consensus 60 ~~~~~v~~a~~~~~~~~~~~~y~~~----------~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l 129 (404)
T 2o1b_A 60 PTPQGIIDHFQKALTIPENQKYGAF----------HGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCV 129 (404)
T ss_dssp CCCHHHHHHHHHHTTCHHHHSCCCT----------TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCCC----------CCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHh
Confidence 3578899999888743 2223321 11345666666666 864 4 78999999999999999998
Q ss_pred ccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHhhccCCceEEEEecccCccccccc---
Q psy15216 79 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP--- 154 (2602)
Q Consensus 79 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~--- 154 (2602)
. ++||+|+++.+.|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++|
T Consensus 130 ~----~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 202 (404)
T 2o1b_A 130 I----NPGDYVLLPDPGYTDYLAGVLLA---DGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEV 202 (404)
T ss_dssp C----CTTCEEEEEESCCSSHHHHHHHT---TCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHH
T ss_pred c----CCCCEEEEcCCCchhHHHHHHHC---CCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHH
Confidence 7 79999999999999988776554 99999999876 4458999999999888999999999999999997
Q ss_pred HHHHHHHHHhcCCEEEEeccccccc---ccccCCCC----CccEEEeccccccCCCC--cEEEEEecCCCCcccceecCC
Q psy15216 155 ILEIGELCRSKGVIFHCDAAQAVGK---IDINIQNY----KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 225 (2602)
Q Consensus 155 l~~I~~la~~~g~~livD~a~a~g~---~~~dl~~~----~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~ 225 (2602)
+++|+++|++||+++|+|++|+... .+.++..+ +.++++.|+||.+|++| +||+++++++++.+.+...
T Consensus 203 l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~-- 280 (404)
T 2o1b_A 203 FDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQT-- 280 (404)
T ss_dssp HHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHh--
Confidence 6788999999999999999997643 12222222 45789999999988777 7999998877766654321
Q ss_pred CccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc-ccChh
Q psy15216 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGE 304 (2602)
Q Consensus 226 ~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~-~~~~~ 304 (2602)
...++++.+...++.++|+....++++.+++++++++++.+.|.+ . ++.+..+.. +....+.++ ..+..
T Consensus 281 -----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---g~~~~~~~~~~~~~~ 350 (404)
T 2o1b_A 281 -----HTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAK-A-DLPFVHAKG---GIYVWLETPPGYDSE 350 (404)
T ss_dssp -----HHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCEECCCB---SSEEEEECCTTCCHH
T ss_pred -----hccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-c-CCeecCCCc---ceEEEEeCCCCCCHH
Confidence 112456677777777777643456788888999999999999987 3 676654322 223444554 23456
Q ss_pred HHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 305 SLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 305 ~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++...| +||.+++|..|... ..+++||+++. ++++++.++++|++.
T Consensus 351 ~l~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRis~~~--~~e~l~~~l~~l~~~ 399 (404)
T 2o1b_A 351 QFEQFLVQEKSILVAPGKPFGEN-----------------GNRYVRISLAL--DDQKLDEAAIRLTEL 399 (404)
T ss_dssp HHHHHHHHHHCEECEESGGGCGG-----------------GTTEEEEECCS--CTTHHHHHHHHHHGG
T ss_pred HHHHHHHHHCCEEEeCchhhCcC-----------------CCCeEEEEEcC--CHHHHHHHHHHHHHH
Confidence 666664 49999998877431 13789999985 778999999999863
No 169
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.90 E-value=2.9e-23 Score=272.71 Aligned_cols=314 Identities=14% Similarity=0.129 Sum_probs=233.2
Q ss_pred CCCHHHHHHHHHHHhhh--cCCCCCCCcchhhhHHHHHHHHHHHHHHHh----CC--CC-CcEEEeCCHHHHHHHHHHhc
Q psy15216 8 PIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLI----YA--DP-REIIWTSGATESNNLAIKGA 78 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~--~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g~--~~-~~Iv~t~g~T~al~~~~~~l 78 (2602)
++++.+.+++.+.+... ..++. .....++|+.+++++ |. ++ ++|++|+|+++|+++++.++
T Consensus 50 ~~~~~v~~a~~~~~~~~~~~~y~~----------~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~ 119 (412)
T 2x5d_A 50 PTPPHIVEKLCTVAQREDTHGYST----------SRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLAT 119 (412)
T ss_dssp CCCHHHHHHHHHTC---------C----------TTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCC----------CCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHh
Confidence 46788888888876532 11110 112356677777777 85 56 69999999999999999998
Q ss_pred ccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC--CccChHHHHhhccCCceEEEEecccCccccccc--
Q psy15216 79 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP-- 154 (2602)
Q Consensus 79 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~--~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~-- 154 (2602)
. ++||+|+++.+.|+++...+... |++++.++.+++ +.+|+++|++++++++++|++++|+||||.++|
T Consensus 120 ~----~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~ 192 (412)
T 2x5d_A 120 L----DHGDTILVPNPSYPIHIYGAVIA---GAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELD 192 (412)
T ss_dssp C----CTTCEEEEEESCCHHHHHHHHHH---TCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHH
T ss_pred C----CCCCEEEEcCCCchhHHHHHHHc---CCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHH
Confidence 7 79999999999999988777665 999999998764 347999999999989999999999999999998
Q ss_pred -HHHHHHHHHhcCCEEEEecccccccc----cccCCC----CCccEEEeccccccCCCC--cEEEEEecCCCCcccceec
Q psy15216 155 -ILEIGELCRSKGVIFHCDAAQAVGKI----DINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIH 223 (2602)
Q Consensus 155 -l~~I~~la~~~g~~livD~a~a~g~~----~~dl~~----~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~ 223 (2602)
+++|.++|++||+++|+|++|+.+.. +.++.. .+.++++.|+||.+|++| +||+++++++++.+.+...
T Consensus 193 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~ 272 (412)
T 2x5d_A 193 FFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKS 272 (412)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHHHHHh
Confidence 57899999999999999999986432 122222 356899999999988777 7999998877766654321
Q ss_pred CCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc-c-
Q psy15216 224 GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-I- 301 (2602)
Q Consensus 224 g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-~- 301 (2602)
...++++.+...++.++|+....++++..++++++++++.+.|.+ . ++.+..+.. ..+..+.++. .
T Consensus 273 -------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---g~~~~~~~~~~~~ 340 (412)
T 2x5d_A 273 -------YHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLRE-A-GWMVENPKA---SMYVWAKIPEPYA 340 (412)
T ss_dssp -------HHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHH-H-TCCCCCCSB---SSEEEEECCTTTG
T ss_pred -------hhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCEecCCCe---eeEEEEEcCCccC
Confidence 123456777777776777643456788888999999999999987 3 665543321 2234445542 2
Q ss_pred --ChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 302 --EGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 302 --~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+..++...| +||.+++|..|.+. ..+++||+++. ++++++.++++|++.
T Consensus 341 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRis~~~--~~~~l~~~l~~l~~~ 394 (412)
T 2x5d_A 341 HLGSLEFAKKLLQDAKVSVSPGIGFGDY-----------------GDDHVRFALIE--NRDRLRQAVRGIKAM 394 (412)
T ss_dssp GGCHHHHHHHHHHHHCEECEEGGGGCGG-----------------GTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCEEEeCchhhCCC-----------------CCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 456677666 49999999877421 13789999986 889999999999864
No 170
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.90 E-value=2.7e-23 Score=272.47 Aligned_cols=314 Identities=13% Similarity=0.126 Sum_probs=233.0
Q ss_pred CCCHHHHHHHHHHHhhcc-CCCCCccchhHHHHHHHHHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHHHHhhhh
Q psy15216 1404 PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLI------YADPREIIWTSGATESNNLAIKGAAH 1476 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~-~np~~~~~~~~~~~~~~~~~lr~~ia~~~------g~~~~~iv~t~gaT~al~~al~~l~~ 1476 (2602)
+.++.+.+++.+.+.... .++.. ....++|+.+++++ ++++++|++|+|+|+|+..++.++.
T Consensus 54 ~~~~~v~~a~~~~~~~~~~~y~~~----------~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~- 122 (406)
T 1xi9_A 54 QPPEHMKEAYCKAIKEGHNYYGDS----------EGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALL- 122 (406)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCT----------TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCC----------CCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhC-
Confidence 457889999988886532 22221 11345667777766 4567899999999999999999986
Q ss_pred hhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC--CCCcChhHHHhhccCCceEEEEeccccccccccC---h
Q psy15216 1477 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 1551 (2602)
Q Consensus 1477 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l 1551 (2602)
++||+|++++++|+++...+.. .|++++.++.++ ++.+|+++|++++++++++|++++|+||||.++| +
T Consensus 123 ---~~gd~Vl~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l 196 (406)
T 1xi9_A 123 ---DPGDEILVPGPSYPPYTGLVKF---YGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTL 196 (406)
T ss_dssp ---CTTCEEEEEESCCHHHHHHHHH---TTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred ---CCCCEEEEcCCCCccHHHHHHH---cCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHH
Confidence 7999999999999998766654 499999998874 4568999999999999999999999999999988 8
Q ss_pred HHHHHHhhhcCCEEEEecccccCcc---cccCCC--CCc-cEEEEccccccCCCc--eEEEE--Eec----CCCCccccc
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGKI---DINIQN--YKV-DLMSFSAHKIYGPKG--IGALY--IRR----NPRTRIEAQ 1617 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~~---~~~l~~--~~~-D~~v~S~~K~~gp~G--~G~l~--~~~----~~~~~l~~~ 1617 (2602)
++|.++|++||+++|+|++|+.+.. +.++.. .+. +++++|+||.+|++| +|+++ .++ ++++.+...
T Consensus 197 ~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~ 276 (406)
T 1xi9_A 197 EEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRL 276 (406)
T ss_dssp HHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHH
Confidence 9999999999999999999976432 111111 345 789999999888888 89999 676 554444332
Q ss_pred cccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe--
Q psy15216 1618 IHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-- 1695 (2602)
Q Consensus 1618 ~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~-- 1695 (2602)
.. .. ++++...+.++.++|+....++++.++++.++++++.+.|.+ .+++.+..+.. +....+.++
T Consensus 277 ~~-------~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~---~~~~~~~~~~~ 344 (406)
T 1xi9_A 277 AR-------IR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNE-IPGISTTKPQG---AFYIFPKIEVG 344 (406)
T ss_dssp HH-------HT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHT-STTEECCCCCB---SSEECCEECSC
T ss_pred HH-------hh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh-CCCCeeecCCe---eEEEEEecCcc
Confidence 21 11 356666677777777532334678888999999999999987 67887754322 122222444
Q ss_pred -cCCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1696 -FIEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1696 -~~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+.+..++...| +||.+++|..|... ..+++||+++ ++.+++++++++|++.
T Consensus 345 ~~~~~~~l~~~l~~~~gi~v~~g~~f~~~-----------------~~~~lRis~~--~~~~~i~~~~~~l~~~ 399 (406)
T 1xi9_A 345 PWKNDKEFVLDVLHNAHVLFVHGSGFGEY-----------------GAGHFRAVFL--PPIEILEEAMDRFEKF 399 (406)
T ss_dssp SCSSHHHHHHHHHHHHCEECEEGGGGCGG-----------------GTTBEEEECC--SCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhcCCC-----------------CCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 23555666544 59999988876421 1278999998 8999999999999873
No 171
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.90 E-value=1.3e-22 Score=264.60 Aligned_cols=315 Identities=12% Similarity=0.111 Sum_probs=232.7
Q ss_pred CCCHHHHHHHHHHHhhh-cCCCCCCCcchhhhHHHHHHH-HHHHHHHH----hC--CCCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 8 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEK-ARNEVAQL----IY--ADPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~-~~~p~~~~~~~~~~~~~~~~~-~r~~lA~~----~g--~~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
++|+.+.+++.+.+... ..++. . ..+ +|+.++++ +| +++++|++|+|+++|+++++.++.
T Consensus 41 ~~~~~v~~a~~~~~~~~~~~y~~------~------~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~ 108 (390)
T 1d2f_A 41 ATAPCIIEALNQRLMHGVFGYSR------W------KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWS 108 (390)
T ss_dssp CCCHHHHHHHHHHHTTCCCCCCC------S------CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSS
T ss_pred CCCHHHHHHHHHHHhCCCCCCCC------C------ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhc
Confidence 57889999999987531 11111 1 233 55555555 46 677899999999999999999987
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC---CccChHHHHhhccC-CceEEEEecccCccccccc-
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN---GLITLSQLEEKICS-DTILVSVMLVNNEIGVIQP- 154 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~---~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~- 154 (2602)
++||+|+++.|.|+++...+... |++++.++.+++ +.+|+++|++++++ ++++|++++|+||||.++|
T Consensus 109 ----~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~ 181 (390)
T 1d2f_A 109 ----ETGEGVVIHTPAYDAFYKAIEGN---QRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTC 181 (390)
T ss_dssp ----CTTCEEEEEESCCHHHHHHHHHT---TCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCT
T ss_pred ----CCCCEEEEcCCCcHHHHHHHHHC---CCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCH
Confidence 79999999999999987766544 999999987643 35899999999986 8999999999999999998
Q ss_pred --HHHHHHHHHhcCCEEEEeccccccc----ccccCCCCC---ccEEEeccccccCCCC--cEEEEEe-cCCCCccccee
Q psy15216 155 --ILEIGELCRSKGVIFHCDAAQAVGK----IDINIQNYK---VDLMSFSAHKIYGPKG--IGALYIR-RNPRTRIEAQI 222 (2602)
Q Consensus 155 --l~~I~~la~~~g~~livD~a~a~g~----~~~dl~~~~---~D~~~~S~~K~~Gp~G--~G~l~~~-~~~~~~l~~~~ 222 (2602)
+++|+++|++||+++|+|++|+... .+.++..+. .|. +.|+||.+|++| +||++++ +++++.+.+..
T Consensus 182 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 260 (390)
T 1d2f_A 182 DELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSAL 260 (390)
T ss_dssp THHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHH
Confidence 7889999999999999999998632 222332222 266 899999888777 6999986 55555554432
Q ss_pred cCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--
Q psy15216 223 HGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-- 300 (2602)
Q Consensus 223 ~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-- 300 (2602)
.+ ....++++.++..++.++++....++++.++++.++++++.+.|.+.+|++.+..+.. +....+.++.
T Consensus 261 ~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~~~~~~~~~~ 332 (390)
T 1d2f_A 261 KG-----RDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQS---TYLAWLDLRPLN 332 (390)
T ss_dssp HT-----TSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSB---CSEEEEECGGGC
T ss_pred hh-----hcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCc---cEEEEEEccccC
Confidence 10 1123467777777777778744456788888999999999999976456776554322 2233455554
Q ss_pred cChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 301 IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 301 ~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.+..++...| +||.+++|..|.+. ..+++||+++. ++++++.+++.|++.
T Consensus 333 ~~~~~l~~~l~~~~gi~v~~g~~f~~~-----------------~~~~~Ris~~~--~~~~l~~~l~~l~~~ 385 (390)
T 1d2f_A 333 IDDNALQKALIEQEKVAIMPGYTYGEE-----------------GRGFVRLNAGC--PRSKLEKGVAGLINA 385 (390)
T ss_dssp CCHHHHHHHHHHTTCEECEEGGGGCGG-----------------GTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCEEeeCccccCCC-----------------CCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 3566676665 59999998877421 13789999985 578999999998863
No 172
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.90 E-value=1.3e-23 Score=272.10 Aligned_cols=329 Identities=16% Similarity=0.140 Sum_probs=230.2
Q ss_pred CHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEE
Q psy15216 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHI 89 (2602)
Q Consensus 10 p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~V 89 (2602)
++.+.+++.+.+...+.. ..+..+++|+.+++++|.+ ++++++|+|+|+++++.++. +++||+|
T Consensus 16 ~~~~~~a~~~~~~~~~~~-----------~~~~~~~l~~~la~~~~~~--~~i~~~sgt~al~~~l~~l~---~~~gd~V 79 (373)
T 3frk_A 16 EYEIKFKFEEIYKRNWFI-----------LGDEDKKFEQEFADYCNVN--YCIGCGNGLDALHLILKGYD---IGFGDEV 79 (373)
T ss_dssp HHHHHHHHHHHHHHTCCS-----------SSHHHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHTT---CCTTCEE
T ss_pred CHHHHHHHHHHHHCCCcc-----------CCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcC---CCCcCEE
Confidence 456677777776653211 1246789999999999975 89999999999999999983 3799999
Q ss_pred EEcCCCCcccHHHHHHHHhCCcEEEEeccC-CCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCE
Q psy15216 90 ITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVI 168 (2602)
Q Consensus 90 lv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~ 168 (2602)
+++.++|+++...+... |+++++++.+ +++.+|++++++++++++++|+ ++||||.+.|+++|.++|++||++
T Consensus 80 i~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~ 153 (373)
T 3frk_A 80 IVPSNTFIATALAVSYT---GAKPIFVEPDIRTYNIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKYNLK 153 (373)
T ss_dssp EEETTSCTHHHHHHHHH---SCEEEEECEETTTTEECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHHTCE
T ss_pred EECCCCcHHHHHHHHHc---CCEEEEEeccccccCcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHHHHHcCCE
Confidence 99999999988887666 9999999987 4678999999999999999888 677899999999999999999999
Q ss_pred EEEecccccccccccCCCCC--ccEEEeccc--cccCCCC-cEEEEEecC-CCCcccceecCCCcccc--ccccCcchhH
Q psy15216 169 FHCDAAQAVGKIDINIQNYK--VDLMSFSAH--KIYGPKG-IGALYIRRN-PRTRIEAQIHGGGHEYG--LRSGTLATHQ 240 (2602)
Q Consensus 169 livD~a~a~g~~~~dl~~~~--~D~~~~S~~--K~~Gp~G-~G~l~~~~~-~~~~l~~~~~g~~~~~~--~~~gt~~~~~ 240 (2602)
+|+|++|+.|.. ++...++ .|++++|+| |.+|+.| .|+++.+++ +.+.+.+...++..... ...|.. + .
T Consensus 154 li~D~a~~~g~~-~~~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~-~-~ 230 (373)
T 3frk_A 154 LIEDAAQAHGSL-YKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFN-S-R 230 (373)
T ss_dssp EEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCB-C-C
T ss_pred EEEECCcccCCE-ECCEeccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccCCcccccccc-C-C
Confidence 999999998775 4544445 789999966 9777744 577777643 44555554433322110 111111 0 1
Q ss_pred HHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcc
Q psy15216 241 IVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSS 317 (2602)
Q Consensus 241 ~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~ 317 (2602)
+..+.+++.. ....+++..++.+++++++.+.|.+ ++ +.+...+....+....+.+...+...+.+.| +||.+++
T Consensus 231 ~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~ 308 (373)
T 3frk_A 231 LDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINN-PN-VIIPVEADYAKHVWYTFVIRSEKRDELQKYLNNNGIGTLI 308 (373)
T ss_dssp CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCC-TT-EECCCCCTTEECCCSSEEEEESSHHHHHHHHHHTTBCCBC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-Cc-eEeccCCCCCceeeEEEEEEeCCHHHHHHHHHHCCCCccc
Confidence 1222333332 2245678888999999999999977 55 6654332221122222333334677777777 7999986
Q ss_pred cccCCCCCCChHHHHHHcCCC-------ccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 318 GSACTSASLEPSYVLRALGCN-------DELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 318 g~~~~~~~~~~~~~~~~~g~~-------~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
+..+.. +.++.+ ..++.. +....+.||++++.++|++||++++++|++
T Consensus 309 ~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~ 363 (373)
T 3frk_A 309 HYPIPI-HLQQAY--KDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINA 363 (373)
T ss_dssp SCSSCG-GGSGGG--GGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred CcCCcc-ccChHH--HhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 642111 111111 223321 112236899999999999999999999996
No 173
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.90 E-value=5.5e-23 Score=269.71 Aligned_cols=320 Identities=13% Similarity=0.074 Sum_probs=236.2
Q ss_pred CCCCCC-CCCHHHHHHHHHHHhhhc-CCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHH
Q psy15216 2 DYSATT-PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNL 73 (2602)
Q Consensus 2 d~a~~~-~~p~~v~~a~~~~l~~~~-~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g------~~~~~Iv~t~g~T~al~~ 73 (2602)
+.+... ++|+.+.+++ +.+.... .++. . ....++|+.++++++ +++++|++|+|+|+|+++
T Consensus 49 ~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~------~----~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~ 117 (409)
T 2gb3_A 49 NIGQPDLKTPEVFFERI-YENKPEVVYYSH------S----AGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILF 117 (409)
T ss_dssp SSCCCCSCCCTHHHHHH-HHTCCSSCCCCC------T----TCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHH-HHHhcCCCCCCC------C----CCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHH
Confidence 334444 4678889999 7775311 1111 1 123456666666663 466789999999999999
Q ss_pred HHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC--CCccChHHHHhhccCCceEEEEecccCcccc
Q psy15216 74 AIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGV 151 (2602)
Q Consensus 74 ~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~ld~e~l~~~i~~~tklv~i~~~~npTG~ 151 (2602)
++.++. ++||+|+++.++|+++...+... |++++.++.++ ++.+ +++|++++++++++|++++|+||||.
T Consensus 118 ~~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~-~~~l~~~l~~~~~~v~~~~p~nptG~ 189 (409)
T 2gb3_A 118 SFAVIA----NPGDEILVLEPFYANYNAFAKIA---GVKLIPVTRRMEEGFAI-PQNLESFINERTKGIVLSNPCNPTGV 189 (409)
T ss_dssp HHHHHC----CTTCEEEEEESCCTHHHHHHHHH---TCEEEEEECCGGGTSCC-CTTGGGGCCTTEEEEEEESSCTTTCC
T ss_pred HHHHhC----CCCCEEEEcCCCchhHHHHHHHc---CCEEEEeccCCCCCCcc-HHHHHHhhCcCCeEEEECCCCCCCCC
Confidence 999987 79999999999999988877666 99999999875 3445 89999999989999999999999999
Q ss_pred ccc---HHHHHHHHHhcCCEEEEecccccccc---ccc-CCC-CCccEEEeccccccCCCC--cEEEEEec-CCCCcccc
Q psy15216 152 IQP---ILEIGELCRSKGVIFHCDAAQAVGKI---DIN-IQN-YKVDLMSFSAHKIYGPKG--IGALYIRR-NPRTRIEA 220 (2602)
Q Consensus 152 ~~~---l~~I~~la~~~g~~livD~a~a~g~~---~~d-l~~-~~~D~~~~S~~K~~Gp~G--~G~l~~~~-~~~~~l~~ 220 (2602)
++| +++|.++|++||+++|+|++|+.+.. +.. +.. .+.|++++|+||.+|++| +||+++++ ++++.+.+
T Consensus 190 ~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~ 269 (409)
T 2gb3_A 190 VYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMK 269 (409)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHH
Confidence 986 78899999999999999999976532 122 222 256899999999989888 89999988 77666654
Q ss_pred eecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEE-eCCCCCCCCceEEEEEc
Q psy15216 221 QIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYI-NGDMNNRIPHNLNISFN 299 (2602)
Q Consensus 221 ~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l-~~~~~~~~~~~~~~~~~ 299 (2602)
.... + . +++.+...++.++|+....++++..+++.++++++.+.|.+ . ++.+ ..+.. +...++.++
T Consensus 270 ~~~~------~-~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~---~~~~~~~~~ 336 (409)
T 2gb3_A 270 LAQG------R-L-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEE-H-GLKRFTKPSG---AFYITAELP 336 (409)
T ss_dssp HHHH------S-C-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCBCCCSB---SSEEEEECS
T ss_pred HHhc------c-C-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH-c-CceeeeCCCe---eEEEEEEeC
Confidence 3311 1 1 56666666676777533456778888999999999999987 3 6665 43322 233344444
Q ss_pred ccChhHHHHHh--C------CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 300 FIEGESLLMAI--K------DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 300 ~~~~~~~~~~L--~------gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..+..++...| + ||.+++|..|... .....+++||+++ ++++++++++++|++.
T Consensus 337 ~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~--------------~~~~~~~iRis~~--~~~e~i~~~~~~l~~~ 398 (409)
T 2gb3_A 337 VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLT--------------PGLGKKEIRIACV--LEKDLLSRAIDVLMEG 398 (409)
T ss_dssp SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSS--------------TTTTSSEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhccccccCcEEEeCchHhCCC--------------CCCCCCEEEEEeC--CCHHHHHHHHHHHHHH
Confidence 44566777666 5 8999988776431 0112479999998 7999999999999864
No 174
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.90 E-value=1.3e-22 Score=267.46 Aligned_cols=313 Identities=16% Similarity=0.106 Sum_probs=238.4
Q ss_pred CCCCHHHHHHHHHHHhhcc--CCCCCccchhHHHHHHHHHHHHHHHHHHhC-----CCCCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIY-----ADPREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~--~np~~~~~~~~~~~~~~~~~lr~~ia~~~g-----~~~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
.++++.+.+++.+.+.... .++.. ....++|++++++++ +++++|++|+|+|+|+.+++.++.
T Consensus 70 ~~~~~~v~~a~~~~~~~~~~~~y~~~----------~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~ 139 (427)
T 3dyd_A 70 LPTDPEVTQAMKDALDSGKYNGYAPS----------IGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLA 139 (427)
T ss_dssp SCCCHHHHHHHHHHHHHCCSSSCCCT----------TCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHhcCcCCCCCCC----------CCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhc
Confidence 4678899999999887632 22211 125688999999998 778899999999999999999987
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC--CCCcChhHHHhhccCCceEEEEeccccccccccC---
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP--- 1550 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~--- 1550 (2602)
++||+|+++.|+|+++...+..+ |++++.++.++ ++.+|++++++++++++++|++++|+||||.++|
T Consensus 140 ----~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~ 212 (427)
T 3dyd_A 140 ----NPGQNILVPRPGFSLYKTLAESM---GIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRH 212 (427)
T ss_dssp ----CTTCEEEEEESCCTHHHHHHHHT---TCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred ----CCCCEEEEcCCCchhHHHHHHHc---CCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHH
Confidence 79999999999999987666555 99999998764 5678999999999999999999999999999999
Q ss_pred hHHHHHHhhhcCCEEEEeccccc----CcccccCCCCCc---cEEEEccccccCCCc--eEEEEEecCC-------CCcc
Q psy15216 1551 ILEIGELCRSKGVIFHCDAAQAV----GKIDINIQNYKV---DLMSFSAHKIYGPKG--IGALYIRRNP-------RTRI 1614 (2602)
Q Consensus 1551 l~~I~~ia~~~gi~vivD~a~~~----g~~~~~l~~~~~---D~~v~S~~K~~gp~G--~G~l~~~~~~-------~~~l 1614 (2602)
+++|+++|++||+++|+|++|+. +....++..++. .+++.|+||.+|++| +|+++++++. .+.+
T Consensus 213 l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l 292 (427)
T 3dyd_A 213 LQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGL 292 (427)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHH
Confidence 99999999999999999999875 222222222222 366779999888777 8999998642 1112
Q ss_pred ccccccCCccccCCCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEE
Q psy15216 1615 EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNIS 1693 (2602)
Q Consensus 1615 ~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~ 1693 (2602)
.... ....+++...+.++.++|+. ...++++..+++.++++++++.|.+ +|++.+..+... ....+.
T Consensus 293 ~~~~--------~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~p~~g---~~~~~~ 360 (427)
T 3dyd_A 293 VKLS--------QRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAA-IPGLRPVRPSGA---MYLMVG 360 (427)
T ss_dssp HHHH--------HHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH-STTEEEECCSBT---TEEEEE
T ss_pred HHHH--------hccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc-CCCceecCCCee---EEEEEe
Confidence 1111 01246777777777777773 3456788889999999999999988 789887644322 233344
Q ss_pred Eec------CCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1694 FNF------IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1694 ~~~------~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
++. .+..++...| +||.+.+|..|..+ +++||+++ ++.+++++++++|++
T Consensus 361 l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~-------------------~~iRis~~--~~~e~i~~~l~~l~~ 419 (427)
T 3dyd_A 361 IEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYP-------------------NFIRVVIT--VPEVMMLEACSRIQE 419 (427)
T ss_dssp ECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCT-------------------TEEEEESC--SCHHHHHHHHHHHHH
T ss_pred cCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCC-------------------CeEEEEEC--CCHHHHHHHHHHHHH
Confidence 441 2345555544 69999999877543 89999987 689999999999987
Q ss_pred h
Q psy15216 1765 K 1765 (2602)
Q Consensus 1765 ~ 1765 (2602)
.
T Consensus 420 ~ 420 (427)
T 3dyd_A 420 F 420 (427)
T ss_dssp H
T ss_pred H
Confidence 3
No 175
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.90 E-value=4.5e-24 Score=275.92 Aligned_cols=314 Identities=14% Similarity=0.133 Sum_probs=210.0
Q ss_pred CceEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCCCCCCC
Q psy15216 636 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNI 715 (2602)
Q Consensus 636 ~~~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~ 715 (2602)
+..++|||+|||++++++++++++.+ +..|...+||.+. +.....++..++..+|+++++. ..
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~-------------~~g~i~d~~~~~~~ik~~~~~~--~~ 74 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL-------------MEGMVAEPAALAQEIKELLLEA--RT 74 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE-------------ETTEESCHHHHHHHHHHHHHHH--TC
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc-------------cCCCcCCHHHHHHHHHHHHHHc--CC
Confidence 34679999999999999988777655 2345556666431 2223456777888899988762 11
Q ss_pred CCCCCCeeeecCCCceEEEEeCceeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCCCCHHH---------------
Q psy15216 716 NTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQ--------------- 780 (2602)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~q--------------- 780 (2602)
........+.+.. ..........++++++... ++..++++++.++.++||++| +.+.+
T Consensus 75 ~~~~v~~~i~~~~-~~~~~~~~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~--~~~~~~~~~~~~~~~v~~va 147 (377)
T 2ych_A 75 RKRYVVTALSNLA-VILRPIQVPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFA--PLTPLSEVQEGEQVQVMVAA 147 (377)
T ss_dssp CCCEEEEEECGGG-CEEEEEEEECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEE--ESSCGGGSCTTSEEEEEEEE
T ss_pred CcceEEEEecCCc-EEEEEEECCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEE--EeCCCCCCCCcceeEEEEEE
Confidence 1111111111100 0011111245788887654 355788899999999999998 33333
Q ss_pred -----HHHHHHHHHHcCCceEEEechhHHHHHHhhhcc-CcccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCc
Q psy15216 781 -----RQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDK-NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLG 854 (2602)
Q Consensus 781 -----r~~~~~Aa~~AGl~~~~li~EPtAAAl~y~~~~-~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lG 854 (2602)
.+++++|++.||+++..++.||+|||++|+... ...+..++|+|+||||||+++++ .+.+. ..++..+|
T Consensus 148 ~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~--~g~~~---~~~~~~~G 222 (377)
T 2ych_A 148 ARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLR--GDKPL---AVRVLTLS 222 (377)
T ss_dssp EEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEE--TTEEE---EEEEESCS
T ss_pred ecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEE--CCEEE---EEEeeech
Confidence 389999999999999999999999999986543 22456799999999999999987 34332 24557999
Q ss_pred chHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHcccccceEE----EEEecCCceEEEEeCHHHHHHHHHHHHH
Q psy15216 855 GDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKL----NVKLSDKKIVNITIDMKQFFTITQHLVN 930 (2602)
Q Consensus 855 G~~~D~~l~~~l~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~~~~----~i~~~~~~~~~~~itr~~fe~l~~~~~~ 930 (2602)
|.+||+.|.+.+ . .+ ...||++|+.++....... .+++. ....+++|++|++++++.++
T Consensus 223 G~~i~~~i~~~~----~---~~-------~~~aE~~K~~~~~~~~~~~~~~~~i~~~---~~~~~i~~~~~~~~i~~~~~ 285 (377)
T 2ych_A 223 GKDFTEAIARSF----N---LD-------LLAAEEVKRTYGMATLPTEDEELLLDFD---AERERYSPGRIYDAIRPVLV 285 (377)
T ss_dssp HHHHHHHHHHHT----T---CC-------HHHHHHHHHHTC----------------------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----C---CC-------HHHHHHHHhhcccccccccccccccccc---cccccCCHHHHHHHHHHHHH
Confidence 999999988732 1 11 4689999999876432211 11111 13457899999999999999
Q ss_pred HHHHHHHHHHHHc--CCCccccceEEEecCccchHHHHHHHHhhccCcccCc--------------------CCcchHhH
Q psy15216 931 RTILLSSKALMDA--NLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTS--------------------IDPDKAVV 988 (2602)
Q Consensus 931 ~~~~~i~~~l~~a--~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~~~~~~~--------------------~~p~~aVa 988 (2602)
++...|++.|+.. +.....++.|+|+||+|++|.+++.+++.|+.++... .+|..++|
T Consensus 286 ~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~~l~~~~p~~a~a 365 (377)
T 2ych_A 286 ELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQLQEIGPEFAVA 365 (377)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHHHHHhhhHHHHHH
Confidence 9999999999863 5566789999999999999999999999998654432 13445677
Q ss_pred HHHHHHh
Q psy15216 989 FGAAIQA 995 (2602)
Q Consensus 989 ~GAa~~a 995 (2602)
.|+|+++
T Consensus 366 ~Glal~~ 372 (377)
T 2ych_A 366 LGLALRG 372 (377)
T ss_dssp HHHHHHH
T ss_pred HHHHHcC
Confidence 7888766
No 176
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.90 E-value=2.5e-24 Score=271.89 Aligned_cols=299 Identities=20% Similarity=0.173 Sum_probs=202.4
Q ss_pred cceEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCCcEEecHHHHhhhcc-CCCCch-hhhhhhcCCCCC
Q psy15216 2032 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNI-DPKNTI-SSIKRFIARDLK 2109 (2602)
Q Consensus 2032 ~~~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~-~p~~~~-~~~K~~lg~~~~ 2109 (2602)
+++++|||+||+|+.+++ ..|. ....||+|+...+....+|.. ..... ++..+. ..-...+|....
T Consensus 20 ~m~~igiDlG~~~tkv~~-~~g~---------~~~~PSvva~~~~~~~~~~~~--~~v~~~~g~~~~~~~~~~~vG~~A~ 87 (346)
T 2fsj_A 20 HMVVVGLDVGYGDTKVIG-VDGK---------RIIFPSRWAVTETESWGIGGK--IPVLSTDGGQTKFIYGKYASGNNIR 87 (346)
T ss_dssp -CEEEEEEECSSEEEEEC-GGGC---------EEEEESCEEEECCSCC----C--CCCBBSSTTSSEEEEGGGCCSSCCB
T ss_pred eeEEEEEecCCcceeEEe-cCCC---------EEEecceeeeccccccCcCcc--eEEEEecccccccCCcEEEEcccee
Confidence 347899999999999874 2221 124799998865432112210 00000 000000 012223343221
Q ss_pred CCCCCCCCeeeecCCCceEEEecCceeCHHHHHHHHHHHHHHHHHHhhccccceEE--EeeCCCCCHHHHHHHHHHHHHc
Q psy15216 2110 NINTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAV--ITVPAYFNDIQRQFTKNAAKLA 2187 (2602)
Q Consensus 2110 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~V--iTVPa~f~~~qr~~l~~Aa~~A 2187 (2602)
.| ...+.+++++..++++..|++.++...+.+ .++| |+||++|+..||+++++++..+
T Consensus 88 ------~~-------------l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~ 147 (346)
T 2fsj_A 88 ------VP-------------QGDGRLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENK 147 (346)
T ss_dssp ------CC-------------SSTTCTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTE
T ss_pred ------cc-------------cCCCcccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCC
Confidence 11 122344567777888888877653333333 5799 9999999999999999998775
Q ss_pred --------C------CceeEeechhHHHHHHhhhcc---CCCCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCc
Q psy15216 2188 --------G------LNVLRLLNEPTSAAIAYKLDK---NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLG 2250 (2602)
Q Consensus 2188 --------G------l~~~~li~EP~AAAl~y~~~~---~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lG 2250 (2602)
| ++.+++++||+|||++| +.. ..++++++|+|+||||||++++++.++. .+.++.++..+|
T Consensus 148 ~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~-l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lG 225 (346)
T 2fsj_A 148 VLTVTGPEGEVRQFNITRLIMRPQGVGAALYL-LNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIG 225 (346)
T ss_dssp EEEEECGGGCEEEEEEEEEEEEETTHHHHHHH-HHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCC
T ss_pred CcEEEeCCCceEEEEEEEEEEEccHHHHHHHh-hccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchh
Confidence 4 35689999999999988 322 2234789999999999999999987776 566656778999
Q ss_pred hhHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHhcccceEEEEEEecCCceEEEEcCHHHH-HHHHHHHHHHHH
Q psy15216 2251 GDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNITIDMKQF-FTITQHLVNRTI 2329 (2602)
Q Consensus 2251 G~~~D~~l~~~l~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~itr~~f-e~l~~~~~~~~~ 2329 (2602)
|.+|++.|.+++.+++.... ... ...+| ... . +.+. +. .++++++ +++++++++++.
T Consensus 226 g~~i~~~I~~~i~~~~g~~~-~i~-----~~~~e-------~~~--~--~~~~-g~----~~~~~~i~~~~i~~~~~~i~ 283 (346)
T 2fsj_A 226 VGDAISALSRKIAKETGFVV-PFD-----LAQEA-------LSH--P--VMFR-QK----QVGGPEVSGPILEDLANRII 283 (346)
T ss_dssp HHHHHHHHHHHHHHHHCCCC-CHH-----HHHHH-------TTS--C--EEET-TE----EECSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCc-CCC-----HHHHh-------cCC--e--EeEC-Cc----cCCHHHHHHHHHHHHHHHHH
Confidence 99999999999887642100 111 11122 111 1 2222 22 3558999 999999999999
Q ss_pred HHHHHHHHHcCCCccccceEEEEeCccchHHHHHHHHhhcCCcccC---CCCccchhhhHHHHHhH
Q psy15216 2330 LLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLT---SIDPDKAVVFGAAIQAN 2392 (2602)
Q Consensus 2330 ~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~~---~~~p~~aVa~GAa~~a~ 2392 (2602)
+.+++.|+++ .++++.|+|+||+|++ +++.+++.|+.. .. ..||++|+|+|+..++.
T Consensus 284 ~~i~~~l~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~~-~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 284 ENIRLNLRGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPGT-LVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp HHHHHHHGGG---GGGEEEEEEESTTHHH--HGGGGGGGSTTC-BCCCCTTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHhh---hhcccEEEEECCcHHH--HHHHHHHHCcCc-EEeccCCCcHHHHHHHHHHHHh
Confidence 9999999876 5578999999999999 999999999743 34 67999999999998763
No 177
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.90 E-value=7.6e-23 Score=267.82 Aligned_cols=317 Identities=16% Similarity=0.146 Sum_probs=236.5
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCE
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~ 88 (2602)
.++.+.+++.+.+... .++.. .+.+.+...+..+++++++++++|.+ + .++++++++|+..++.++. ++||.
T Consensus 58 ~~~~v~~a~~~~~~~~-~~~~~-~~~~~~g~~~~~~~l~~~la~~~~~~-~-~i~~~sGt~a~~~~l~~~~----~~gd~ 129 (399)
T 3tqx_A 58 DHPALIKTAQTVVEQY-GFGMA-SVRFICGTQTIHKELEKDISEFLGTD-D-TILYSSCFDANGGLFETLL----GPEDA 129 (399)
T ss_dssp TCHHHHHHHHHHHHHH-CSCCC-SCCCCCCCBHHHHHHHHHHHHHHTCS-E-EEEESCHHHHHHTTHHHHC----CTTCE
T ss_pred CCHHHHHHHHHHHHHh-CCCCC-CcCccccCchHHHHHHHHHHHHHCCC-c-EEEECchHHHHHHHHHHhc----CCCCE
Confidence 4789999999988763 22221 11222223456789999999999975 3 4455566889999998887 89999
Q ss_pred EEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC------CceEEEEecccCcccccccHHHHHHHH
Q psy15216 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGELC 162 (2602)
Q Consensus 89 Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~------~tklv~i~~~~npTG~~~~l~~I~~la 162 (2602)
|+++.+.|+++...+.. .|++++.++. +|++++++++++ ++++|++++++||||.++|+++|.++|
T Consensus 130 v~~~~~~~~~~~~~~~~---~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~ 201 (399)
T 3tqx_A 130 IISDELNHASIIDGIRL---CKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLA 201 (399)
T ss_dssp EEEETTCCHHHHHHHHS---CCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHH
T ss_pred EEECCcccHHHHHHHHH---cCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHH
Confidence 99999999998776554 4999999875 478889888875 899999999999999999999999999
Q ss_pred HhcCCEEEEecccccccccc------cCCC--CCccEEEeccccccC-CCCcEEEEEecCCCCcccceecCCCccccccc
Q psy15216 163 RSKGVIFHCDAAQAVGKIDI------NIQN--YKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGHEYGLRS 233 (2602)
Q Consensus 163 ~~~g~~livD~a~a~g~~~~------dl~~--~~~D~~~~S~~K~~G-p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 233 (2602)
++||+++|+|++|+.+.... .... .++|++++|+||++| ++| ||++.++++++.+...... ....
T Consensus 202 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~~~~~~~~~-----~~~~ 275 (399)
T 3tqx_A 202 DKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHKEIIEWLRNRSRP-----YLFS 275 (399)
T ss_dssp HHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECHHHHHHHHHHCHH-----HHSS
T ss_pred HHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCHHHHHHHHHhCcc-----eecc
Confidence 99999999999997654321 1111 256999999999776 988 9999998777666543210 1124
Q ss_pred cCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc-cChhHHHHHh--
Q psy15216 234 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI-- 310 (2602)
Q Consensus 234 gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~L-- 310 (2602)
++++...++++.++++....+.++.++++.++++++.+.|.+ . ++.+..+. ..++.+.++. .+..++...|
T Consensus 276 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~ 349 (399)
T 3tqx_A 276 NTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEK-L-GFQLVPGN----HPIIPVMLGDAQLATNMADHLLQ 349 (399)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH-H-TCCBCCCS----SSEEEEEEECHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH-c-CCCcCCCC----CCEEEEEeCCHHHHHHHHHHHHH
Confidence 577778877887888865466789999999999999999987 3 66555222 2334444443 2455666666
Q ss_pred CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 311 KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 311 ~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+||.++++..+..+ ...+++|++++.+++++|+++++++|++.
T Consensus 350 ~gi~v~~~~~~~~~----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 392 (399)
T 3tqx_A 350 EGIYVVGFSYPVVP----------------MGKARIRVQMSAVHTQQQLDRAIEAFGQV 392 (399)
T ss_dssp TTEECCEECTTTSC----------------TTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEeeeCCCCCC----------------CCCceEEEEeecCCCHHHHHHHHHHHHHH
Confidence 79999876432211 12378999999999999999999999964
No 178
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.90 E-value=6e-23 Score=266.21 Aligned_cols=334 Identities=14% Similarity=0.123 Sum_probs=231.9
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCC
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~g 86 (2602)
.|..+.+.+++.+.+...+.++ .+..+++|+.+++++|.+ ++++++|+|+|+++++.++. +++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~~~~~~---~~~g 78 (374)
T 3uwc_A 15 FADIEPYLNDLREFIKTADFTL-----------GAELEKFEKRFAALHNAP--HAIGVGTGTDALAMSFKMLN---IGAG 78 (374)
T ss_dssp TSSCHHHHHHHHHHHHHTCCSS-----------CHHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTT---CCTT
T ss_pred CCCchHHHHHHHHHHHcCCccc-----------ChhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcC---CCCC
Confidence 3443447888888776532111 235788999999999976 88999999999999999982 2799
Q ss_pred CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcC
Q psy15216 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (2602)
Q Consensus 87 d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g 166 (2602)
|+|+++.++|+++...+... |++++.++.++++.+|++++++++++++++|+ ++||||.+.|+++|.++|++||
T Consensus 79 d~v~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~ 152 (374)
T 3uwc_A 79 DEVITCANTFIASVGAIVQA---GATPVLVDSENGYVIDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKKHN 152 (374)
T ss_dssp CEEEEESSSCHHHHHHHHHT---TCEEEEECBCTTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTT
T ss_pred CEEEECCCccHHHHHHHHHc---CCEEEEEecCCCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHHcC
Confidence 99999999999987766544 99999999987888999999999999999888 7889999999999999999999
Q ss_pred CEEEEecccccccccccCCCCC--ccEEEeccc--cccCCCC-cEEEEEec-CCCCcccceecCCCccccccc--cCcch
Q psy15216 167 VIFHCDAAQAVGKIDINIQNYK--VDLMSFSAH--KIYGPKG-IGALYIRR-NPRTRIEAQIHGGGHEYGLRS--GTLAT 238 (2602)
Q Consensus 167 ~~livD~a~a~g~~~~dl~~~~--~D~~~~S~~--K~~Gp~G-~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~--gt~~~ 238 (2602)
+++|+|++|+.|.. ++....+ .|++++|+| |++|+.| .|+++.++ .+.+.+.+...++... .+.. .+.++
T Consensus 153 ~~li~D~~~~~g~~-~~~~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 230 (374)
T 3uwc_A 153 LHIVEDACQTILGR-INDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLIN-RDVCVEYGINC 230 (374)
T ss_dssp CEEEEECTTCTTCE-ETTEETTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEE-TTEESSCCCBC
T ss_pred CEEEEeCCCccCce-eCCeeccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccc-cCccccccccC
Confidence 99999999998754 3333333 699999988 9887754 67777665 3444444433222111 1111 11111
Q ss_pred hHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCc-eEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeE
Q psy15216 239 HQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEE-IYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIA 314 (2602)
Q Consensus 239 ~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~ 314 (2602)
.+..+.+++.. ....+++..++..++++++.+.|.+ +++ +.+...+....+....+.+...+..++.+.| +||.
T Consensus 231 -~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~ 308 (374)
T 3uwc_A 231 -RMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVD-LSEFIDVPVRREGVYHVFHIYVLRVKYRDQLFQYLKDNGIE 308 (374)
T ss_dssp -BCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGG-GTTTEECCCCCTTEECCCSSEEEEETTHHHHHHHHHHTTBC
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeEEeccCCCCCceeeEEEEEEcCCHHHHHHHHHHCCCc
Confidence 12223333332 2245678888999999999999987 677 7765433322222222333334666777777 7999
Q ss_pred EcccccCCCCCCChHHHHHHcCCCc-------cCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 315 VSSGSACTSASLEPSYVLRALGCND-------ELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 315 v~~g~~~~~~~~~~~~~~~~~g~~~-------~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++++..... +..+.+ ..++... ....+.+|++++.++|++||++++++|++.
T Consensus 309 v~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 367 (374)
T 3uwc_A 309 VKIHYPIAM-HLQPAA--KSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREF 367 (374)
T ss_dssp CBCSCSSCG-GGSGGG--GGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred cccCCCCcc-ccChhh--hhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 987752110 111111 1122211 112268999999999999999999999974
No 179
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.90 E-value=3.4e-23 Score=270.44 Aligned_cols=335 Identities=13% Similarity=0.095 Sum_probs=228.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccc
Q psy15216 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF 81 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~ 81 (2602)
|+.++++..+.+.+++.. +.++.. .+.++....+..+++++++++++|.+ +.++++|+++|+++++.++.
T Consensus 31 d~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~-- 100 (398)
T 2rfv_A 31 IFQTSTFVFDSAEQGAAR-----FALEES-GYIYTRLGNPTTDALEKKLAVLERGE--AGLATASGISAITTTLLTLC-- 100 (398)
T ss_dssp CCCCSBCCCSSHHHHHHH-----C------CCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC--
T ss_pred CcCCCccccCCHHHHHHh-----hcCCCC-CCceeCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh--
Confidence 455555555555555442 222222 33444434567899999999999976 56666777899999999987
Q ss_pred cccCCCEEEEcCCCCcccHHHHHHH-HhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHH
Q psy15216 82 YKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (2602)
Q Consensus 82 ~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~ 160 (2602)
++||+|+++.+.|+++...+..+ +..|++++.++.+ |++++++++++++++|++++|+||||.++|+++|.+
T Consensus 101 --~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~ 173 (398)
T 2rfv_A 101 --QQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAG 173 (398)
T ss_dssp --CTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred --CCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHH
Confidence 79999999999999988877433 5569999999864 899999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCC---cEEEEEecCCCC-cccceecCCCccccccccCc
Q psy15216 161 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKG---IGALYIRRNPRT-RIEAQIHGGGHEYGLRSGTL 236 (2602)
Q Consensus 161 la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G---~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~gt~ 236 (2602)
+|++||+++|+|++|+.+..+..+ .+++|+++.|+||+++.+| .|++++++++++ .+.+...+ ++.++.
T Consensus 174 l~~~~~~~li~De~~~~~~~~~~~-~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~------~~~~~~ 246 (398)
T 2rfv_A 174 IAHQQGALLVVDNTFMSPYCQQPL-QLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKD------ITGGCM 246 (398)
T ss_dssp HHHHTTCEEEEECTTTCTTTCCGG-GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHH------TTCCCC
T ss_pred HHHHcCCEEEEECCCcccccCCch-hhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHh------CCCCCC
Confidence 999999999999999877653222 3578999999999775444 499999987655 44433211 113456
Q ss_pred chhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC--------------ceEEeCCCCCCCCceEEEEEccc-
Q psy15216 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIE--------------EIYINGDMNNRIPHNLNISFNFI- 301 (2602)
Q Consensus 237 ~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~--------------g~~l~~~~~~~~~~~~~~~~~~~- 301 (2602)
+....+++.++++....++ ++..++++.+.+.|.+ .+ ++++..+.......++.+.++..
T Consensus 247 ~~~~~~~~~~~l~~~~~~~----~~~~~~~~~l~~~l~~-~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 321 (398)
T 2rfv_A 247 SPFNAWLTLRGVKTLGIRM----ERHCENALKIARFLEG-HPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGL 321 (398)
T ss_dssp CHHHHHHHHHHHTTHHHHH----HHHHHHHHHHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH
T ss_pred CHHHHHHHHhhhhhHHHHH----HHHHHHHHHHHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCH
Confidence 6666666666776333333 3344455555566654 22 22222111111244555555532
Q ss_pred -ChhHHHHHh--CCeEEcccccCC------CCCC--ChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 302 -EGESLLMAI--KDIAVSSGSACT------SASL--EPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 302 -~~~~~~~~L--~gI~v~~g~~~~------~~~~--~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+...++..+ .++.+++|..++ ...+ .+...+...|+. +++||+|++.+++++++++++++|++.
T Consensus 322 ~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~----~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 322 EAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGIT----DGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp HHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCC----TTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 234455555 477777775432 1100 123344455654 389999999999999999999999853
No 180
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.90 E-value=3.6e-22 Score=269.48 Aligned_cols=323 Identities=19% Similarity=0.170 Sum_probs=242.5
Q ss_pred HHHHHHHHHHHhhcc-CCCCCccchhHHHHHHHHHHHHHHHHHHhCCCC--CcE--EEeCCHHHHHHHHHHhhhhhhccC
Q psy15216 1407 PRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYADP--REI--IWTSGATESNNLAIKGAAHFYKKR 1481 (2602)
Q Consensus 1407 ~~v~eal~~~l~~~~-~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~--~~i--v~t~gaT~al~~al~~l~~~~~~~ 1481 (2602)
..+.+.+.+.+.... .++.. +...........++++++++++|+++ +++ ++|+|+|+|+..++.++. ++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~----~~ 183 (514)
T 3mad_A 110 EHHIAFLNEVYALQSQSNPLH--PDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYR----DW 183 (514)
T ss_dssp HHHHHHHHHHHHHHTTCCTTC--TTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHH----HH
T ss_pred CCHHHHHHHHHHHHhhcCCcc--cccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHH----HH
Confidence 344455555544321 23322 22234456677888999999999864 677 999999999999999987 34
Q ss_pred C--------CEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHH
Q psy15216 1482 G--------KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILE 1553 (2602)
Q Consensus 1482 g--------d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~ 1553 (2602)
| |+|+++.++|+++...+... |++++.++.++++.+|+++|+++|++++++|++++++||||.+.|+++
T Consensus 184 g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~---G~~v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~ 260 (514)
T 3mad_A 184 ARATKGITAPEAVVPVSAHAAFDKAAQYF---GIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPE 260 (514)
T ss_dssp HHHHHCCSSCEEEEETTSCTHHHHHHHHH---TCEEEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHH
T ss_pred hhhhcCCCCCeEEEeCccchHHHHHHHHc---CCeeEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHH
Confidence 4 89999999999988888777 999999999988999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCEEEEecccccCcc-----------cccCCCCCccEEEEccccc-cCCCceEEEEEecCCCCcccc----c
Q psy15216 1554 IGELCRSKGVIFHCDAAQAVGKI-----------DINIQNYKVDLMSFSAHKI-YGPKGIGALYIRRNPRTRIEA----Q 1617 (2602)
Q Consensus 1554 I~~ia~~~gi~vivD~a~~~g~~-----------~~~l~~~~~D~~v~S~~K~-~gp~G~G~l~~~~~~~~~l~~----~ 1617 (2602)
|.++|++||+++|+|++|+.+.. +++....++|++++|+||+ +++.|+|+++++++....... .
T Consensus 261 i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~ 340 (514)
T 3mad_A 261 IAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAAD 340 (514)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESS
T ss_pred HHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccc
Confidence 99999999999999999875432 3455566789999999994 788889999998754322211 1
Q ss_pred cccCCccccCCCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec
Q psy15216 1618 IHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF 1696 (2602)
Q Consensus 1618 ~~g~~~~~~~~~gt~~~~~~~al~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~ 1696 (2602)
+.++........|+.+...+.++.+++.. ...++++..++..++++++.+.|.+ ++++.+..++. .++.+....
T Consensus 341 ~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~----~~~~~~~~~ 415 (514)
T 3mad_A 341 WPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRA-IPSLKILGDPL----WVIAVASDE 415 (514)
T ss_dssp CTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTCEESSCCS----SEEEEECSS
T ss_pred cCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh-CCCeEEeCCCe----EEEEEeCCC
Confidence 11111112233567777777788888874 3456889999999999999999988 78888875531 233333333
Q ss_pred CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCC-CCCHHHHHHHHHHHHHh
Q psy15216 1697 IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR-FTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1697 ~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~-~~t~edid~li~~L~~~ 1765 (2602)
.+..++...| +||.+ ++..+ + +++|++++. .++.+++++++++|++.
T Consensus 416 ~~~~~l~~~L~~~Gi~v-~g~~~--~-------------------~~~Ri~~~~~~~~~e~i~~~l~~L~~~ 465 (514)
T 3mad_A 416 LNIYQVMEEMAGRGWRL-NGLHR--P-------------------PAFHVALTLRHTEPGVVDRFLADLQDA 465 (514)
T ss_dssp SCHHHHHHHHHTTTCBC-EEETT--T-------------------TEEEEECCGGGGSTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCEe-ccCCC--C-------------------CeEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 4556777766 67776 33322 1 579999884 45669999999999974
No 181
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.90 E-value=1.2e-22 Score=266.18 Aligned_cols=315 Identities=13% Similarity=0.148 Sum_probs=235.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCE
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~ 88 (2602)
+++.+.+++.+.+.. ++.+.. .+.+.+...+...++++++++++|++ +. ++++++|+|+..++.++. ++||+
T Consensus 60 ~~~~v~~a~~~~~~~-~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~-~~-i~~~sGs~a~~~~~~~~~----~~gd~ 131 (401)
T 1fc4_A 60 NHPDLIAAAKAGMDS-HGFGMA-SVRFICGTQDSHKELEQKLAAFLGME-DA-ILYSSCFDANGGLFETLL----GAEDA 131 (401)
T ss_dssp TCHHHHHHHHHHHHH-HCSCCC-SCHHHHCCBHHHHHHHHHHHHHHTCS-EE-EEESCHHHHHHTTHHHHC----CTTCE
T ss_pred CCHHHHHHHHHHHHH-hCCCCC-CCCcccCCcHHHHHHHHHHHHHhCCC-cE-EEeCChHHHHHHHHHHHc----CCCCE
Confidence 489999999998865 222221 12222111356789999999999987 44 455666889999988876 89999
Q ss_pred EEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC------CceEEEEecccCcccccccHHHHHHHH
Q psy15216 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGELC 162 (2602)
Q Consensus 89 Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~------~tklv~i~~~~npTG~~~~l~~I~~la 162 (2602)
|+++.+.|+++...+ +..|++++.++. .|+++|++++++ ++++|++++++||||.++|+++|.++|
T Consensus 132 v~~~~~~~~~~~~~~---~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~ 203 (401)
T 1fc4_A 132 IISDALNHASIIDGV---RLCKAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLA 203 (401)
T ss_dssp EEEETTCCHHHHHHH---HTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHH
T ss_pred EEEcchhHHHHHHHH---HHcCCceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHH
Confidence 999999998876654 445999998873 478999998865 799999999999999999999999999
Q ss_pred HhcCCEEEEecccccccc-c--------ccCCCCCccEEEecccccc-CCCCcEEEEEecCCCCcccceecCCCcccccc
Q psy15216 163 RSKGVIFHCDAAQAVGKI-D--------INIQNYKVDLMSFSAHKIY-GPKGIGALYIRRNPRTRIEAQIHGGGHEYGLR 232 (2602)
Q Consensus 163 ~~~g~~livD~a~a~g~~-~--------~dl~~~~~D~~~~S~~K~~-Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~ 232 (2602)
++||+++|+|++|+.+.. + +++.. +.|++++|+||++ |+.| ||+++++++++.+.+.... .. .
T Consensus 204 ~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g-G~~~~~~~~~~~l~~~~~~----~~-~ 276 (401)
T 1fc4_A 204 DKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG-GYTAARKEVVEWLRQRSRP----YL-F 276 (401)
T ss_dssp HHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC-EEEEECHHHHHHHHHHCHH----HH-H
T ss_pred HHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC-EEEEcCHHHHHHHHHhCcC----ce-e
Confidence 999999999999975543 2 33332 5799999999977 7787 9999988776666542210 11 1
Q ss_pred ccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc-cChhHHHHHh-
Q psy15216 233 SGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI- 310 (2602)
Q Consensus 233 ~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~L- 310 (2602)
.++++....+++.++++.... .++..+++.++++++.+.|.+ . ++.+. +. ...++.+.++. .+..++...|
T Consensus 277 ~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~---~~~~~~~~~~~~~~~~~l~~~l~ 349 (401)
T 1fc4_A 277 SNSLAPAIVAASIKVLEMVEA-GSELRDRLWANARQFREQMSA-A-GFTLA-GA---DHAIIPVMLGDAVVAQKFARELQ 349 (401)
T ss_dssp SCCCCHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHH-T-TCCBC-CS---SSSEEEEEEECHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH-c-CCccc-CC---CCCEEEEEcCChHHHHHHHHHHH
Confidence 346777778777788875543 477888999999999999987 3 66555 21 23445555543 3455666666
Q ss_pred -CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 311 -KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 311 -~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+||.++++..|..+ ...+++||+++.+++++|+++++++|++.
T Consensus 350 ~~gi~v~~~~~~~~~----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 393 (401)
T 1fc4_A 350 KEGIYVTGFFYPVVP----------------KGQARIRTQMSAAHTPEQITRAVEAFTRI 393 (401)
T ss_dssp HTTEECCEECTTSSC----------------TTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HCCcEEeeecCCCCC----------------CCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 79999988765422 01368999999999999999999999964
No 182
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.90 E-value=9.7e-23 Score=266.56 Aligned_cols=316 Identities=14% Similarity=0.096 Sum_probs=235.7
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCE
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 1484 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~ 1484 (2602)
.++.+.+++.+.+.... +... .|.......+..+++++++++++|. +++++|+|+|+|+..++.++. ++||+
T Consensus 58 ~~~~v~~a~~~~~~~~~-~~~~-~~~~~~g~~~~~~~l~~~la~~~g~--~~v~~~~ggt~a~~~~~~~~~----~~gd~ 129 (398)
T 3a2b_A 58 TDTRIIKAAQDALEKYG-TGCA-GSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNLGPLSCLM----GRNDY 129 (398)
T ss_dssp GCHHHHHHHHHHHHHHC-SCCC-SBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHSS----CTTCE
T ss_pred CCHHHHHHHHHHHHHcC-CCCC-CcCcccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh----CCCCE
Confidence 67889999999886532 1111 1111112235678899999999996 489999999999999999986 89999
Q ss_pred EEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC----CceEEEEeccccccccccChHHHHHHhhh
Q psy15216 1485 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS----DTILVSVMLVNNEIGVIQPILEIGELCRS 1560 (2602)
Q Consensus 1485 Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~----~t~lv~l~~~~n~tG~~~~l~~I~~ia~~ 1560 (2602)
|+++++.|+++...+... |++++.++. +|+++|++++++ ++++|++++++||||.+.|+++|.++|++
T Consensus 130 V~~~~p~~~~~~~~~~~~---g~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~ 201 (398)
T 3a2b_A 130 ILLDERDHASIIDGSRLS---FSKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANE 201 (398)
T ss_dssp EEEETTCCHHHHHHHHHS---SSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHH
T ss_pred EEECCccCHHHHHHHHHc---CCceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHH
Confidence 999999999987776554 999999875 589999999986 79999999999999999999999999999
Q ss_pred cCCEEEEecccccCcc---cccCC---CC--CccEEEEccccccCCCceEEEEEecCCCCccccccccCCccccCCCCCc
Q psy15216 1561 KGVIFHCDAAQAVGKI---DINIQ---NY--KVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 1632 (2602)
Q Consensus 1561 ~gi~vivD~a~~~g~~---~~~l~---~~--~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~ 1632 (2602)
||+++|+|++|+.+.. ..++. .. ++|++++|+||.+||+| ||+++++++++.+.+.... ....+++
T Consensus 202 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~~~~~~~~~~~l~~~~~~-----~~~~~~~ 275 (398)
T 3a2b_A 202 FDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG-GFVAGDADVIDFLKHNARS-----VMFSASM 275 (398)
T ss_dssp HTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC-EEEEECHHHHHHHHHHCHH-----HHSSBCC
T ss_pred cCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC-cEEEeCHHHHHHHHHhccc-----ceecCCC
Confidence 9999999999986532 11111 11 26899999999999988 9999988766655432110 1123345
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-CCcHHHHHhc--CCE
Q psy15216 1633 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI--KDI 1709 (2602)
Q Consensus 1633 ~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~L--~gI 1709 (2602)
+..+.+++.++|+.. ...++.++++.++++++.+.|.+ . ++.+..+. ..+..+.++. .+..++...| +||
T Consensus 276 ~~~~~a~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----g~~~~~~~~~~~~~~~l~~~l~~~gi 348 (398)
T 3a2b_A 276 TPASVASTLKALEII-QNEPEHIEKLWKNTDYAKAQLLD-H-GFDLGATE----SPILPIFIRSNEKTFWVTKMLQDDGV 348 (398)
T ss_dssp CHHHHHHHHHHHHHH-HHCTHHHHHHHHHHHHHHHHHHH-T-TCCBCSCC----SSEEEEECCCHHHHHHHHHHHHHTTE
T ss_pred CHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHh-c-CCCcCCCC----CCEEEEEcCCHHHHHHHHHHHHHCCc
Confidence 555655566777754 33567888899999999999987 4 66554321 2233333331 2345566655 799
Q ss_pred EEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1710 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1710 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.++++..|..+ ...+++||+++.+++.+++++++++|++.
T Consensus 349 ~v~~~~~~~~~----------------~~~~~iRis~~~~~~~e~i~~~~~~l~~~ 388 (398)
T 3a2b_A 349 FVNPVVSPAVP----------------AEESLIRFSLMATHTYDQIDEAIEKMVKV 388 (398)
T ss_dssp ECEEECTTTSC----------------GGGCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCCC----------------CCCceEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99998776432 12378999999999999999999999974
No 183
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.90 E-value=5.4e-23 Score=265.02 Aligned_cols=317 Identities=17% Similarity=0.190 Sum_probs=235.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||+++.+++++.+.+++.+.+.. ++. +....+..+++++++++++|+++++|++++|+|+|++.++.++.
T Consensus 18 l~~~~~~~~~~~v~~a~~~~~~~---~~~------~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~- 87 (359)
T 1svv_A 18 FVNDYSVGMHPKILDLMARDNMT---QHA------GYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLAL- 87 (359)
T ss_dssp CSCSCSSCCCHHHHHHHHHHTTC---CCC------STTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHC-
T ss_pred ecCCCcCCCCHHHHHHHHHHHhh---ccc------cccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHh-
Confidence 67777788999999999998753 111 11123568899999999999988899999999999999999987
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCC-------ceEEEEecccCcccccc
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD-------TILVSVMLVNNEIGVIQ 153 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~-------tklv~i~~~~npTG~~~ 153 (2602)
++||+|+++.++|+++... ..++..|++++.++.+ ++.+|+++|+++++++ +++|+++++ ||||.++
T Consensus 88 ---~~gd~vl~~~~~~~~~~~~-~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~ 161 (359)
T 1svv_A 88 ---RPWEAVIATQLGHISTHET-GAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQY 161 (359)
T ss_dssp ---CTTEEEEEETTSHHHHSST-THHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCC
T ss_pred ---CCCCEEEEcccchHHHHHH-HHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceec
Confidence 7999999999999998663 1234459999999976 6789999999999765 899999999 7999999
Q ss_pred c---HHHHHHHHHhcCCEEEEeccc---ccccccccCCC----CCccEEEeccccccCCCCcEEEEEecCCCCcccceec
Q psy15216 154 P---ILEIGELCRSKGVIFHCDAAQ---AVGKIDINIQN----YKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIH 223 (2602)
Q Consensus 154 ~---l~~I~~la~~~g~~livD~a~---a~g~~~~dl~~----~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~ 223 (2602)
| +++|.++|++||+++|+|++| +.+..+.+... ..+|++++|+||+++|.|+|++++++++++.+.+...
T Consensus 162 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~~~~~~~~ 241 (359)
T 1svv_A 162 TKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIK 241 (359)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCCCCceEEEEEcccHHHHHHHHHh
Confidence 9 888999999999999999999 55555444332 3578999999999888889999999988888765421
Q ss_pred CCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccCh
Q psy15216 224 GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEG 303 (2602)
Q Consensus 224 g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 303 (2602)
.++. ....+.....++.++++ ..++++..+++.++++++.+.| + .+++++..+.. ..++.+.++
T Consensus 242 ~~~~-----~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~l~~~L-~-~~~~~~~~~~~---~~~~~~~~~---- 305 (359)
T 1svv_A 242 QRGA-----LMAKGWLLGIQFEVLMK--DNLFFELGAHSNKMAAILKAGL-E-ACGIRLAWPSA---SNQLFPILE---- 305 (359)
T ss_dssp HTTC-----CCTTTHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHH-H-HTTCCBSSCCS---SSEECBEEE----
T ss_pred cCCc-----ccccchhhHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHh-c-cCCeEEccCCc---cceEEEEcC----
Confidence 1110 00111122222222232 2345778889999999999999 5 47877764432 122222232
Q ss_pred hHHHHHh--C-CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 304 ESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 304 ~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++...| + ||.+. +.. + ...+++|++++..++++|+++++++|++.
T Consensus 306 ~~~~~~l~~~~gi~v~-~~~--~-----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 354 (359)
T 1svv_A 306 NTMIAELNNDFDMYTV-EPL--K-----------------DGTCIMRLCTSWATEEKECHRFVEVLKRL 354 (359)
T ss_dssp HHHHHHHTTTEECEEE-EEE--T-----------------TTEEEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCEEEE-ecc--c-----------------CCCceEEEEccCcCCHHHHHHHHHHHHHH
Confidence 4566666 5 78872 110 0 01378999999899999999999999863
No 184
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.90 E-value=2.3e-23 Score=272.37 Aligned_cols=316 Identities=13% Similarity=0.133 Sum_probs=235.2
Q ss_pred CCHHHHHHHHHHHhhh----cCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccccccc
Q psy15216 9 IDPRVVDKMIPYLRVQ----FGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK 84 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~----~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~ 84 (2602)
+++.+.+++.+.+... ..++.. ....++|+++++++|+++++|++|+|+++|+.+++.++. +
T Consensus 48 ~~~~v~~a~~~~~~~~~~~~~~y~~~----------~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~----~ 113 (397)
T 2zyj_A 48 PKEEAAEAAARILREKGEVALQYSPT----------EGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFL----D 113 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCCT----------TCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHC----C
T ss_pred CHHHHHHHHHHHHHhcchhhhCCCCC----------CCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhC----C
Confidence 5678888888877641 222221 124678999999999888899999999999999999987 7
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEE-EEecccCcccccccHH---HHH
Q psy15216 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILV-SVMLVNNEIGVIQPIL---EIG 159 (2602)
Q Consensus 85 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv-~i~~~~npTG~~~~l~---~I~ 159 (2602)
+||+|+++.+.|+++...+.. .|++++.++.++++ +|+++|++++++ ++++| ++++++||||.++|.+ +|.
T Consensus 114 ~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~ 189 (397)
T 2zyj_A 114 EGSPVLLEAPSYMGAIQAFRL---QGPRFLTVPAGEEG-PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLL 189 (397)
T ss_dssp TTCEEEEEESCCHHHHHHHHT---TCCEEEEEEEETTE-ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHH---cCCEEEecCcCCCC-CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHH
Confidence 999999999999987766554 49999999887655 899999999975 88987 5799999999999865 889
Q ss_pred HHHHhcCCEEEEecccccccc----cccCCCCC------ccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCc
Q psy15216 160 ELCRSKGVIFHCDAAQAVGKI----DINIQNYK------VDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGH 227 (2602)
Q Consensus 160 ~la~~~g~~livD~a~a~g~~----~~dl~~~~------~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~ 227 (2602)
++|++||+++|+|++|+.... +.++..++ ..+++.|+||++| +| +||+++++++++.+.+...
T Consensus 190 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~---- 264 (397)
T 2zyj_A 190 QMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQ---- 264 (397)
T ss_dssp HHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHHHHHHHH----
T ss_pred HHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHHHHHHHHHHH----
Confidence 999999999999999986432 22333332 2388899999888 66 7999998877666654321
Q ss_pred cccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccC-ceEEeCCCCCCCCceEEEEEc-ccChh
Q psy15216 228 EYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIE-EIYINGDMNNRIPHNLNISFN-FIEGE 304 (2602)
Q Consensus 228 ~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~-g~~l~~~~~~~~~~~~~~~~~-~~~~~ 304 (2602)
.+..+ .+.....++.++|+... .++++..+++.++++++.+.|.+.+| ++.+..+.. ...+.+.++ ..+..
T Consensus 265 --~~~~~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~---g~~~~~~~~~~~~~~ 338 (397)
T 2zyj_A 265 --GADLH-TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKG---GMFVWMELPKGLSAE 338 (397)
T ss_dssp --HHHSS-CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSB---SSEEEEECSTTCCHH
T ss_pred --hhcCC-CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCc---cEEEEEEcCCCCCHH
Confidence 11122 35555666666666321 45778888888999999999977446 577764432 234445554 24566
Q ss_pred HHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 305 SLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 305 ~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++...| +||.+++|..|.+. ....+++||+++.. +++++++++++|++.
T Consensus 339 ~~~~~l~~~gi~v~~g~~f~~~---------------~~~~~~iRis~~~~-~~~~i~~~~~~l~~~ 389 (397)
T 2zyj_A 339 GLFRRALEENVAFVPGGPFFAN---------------GGGENTLRLSYATL-DREGIAEGVRRLGRA 389 (397)
T ss_dssp HHHHHHHHTTEEEEESGGGCTT---------------SCCTTEEEEECSSS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEechHHhcCC---------------CCCCCeEEEEcCCC-CHHHHHHHHHHHHHH
Confidence 777766 79999998877532 01237899999875 899999999999864
No 185
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.90 E-value=2.9e-22 Score=260.90 Aligned_cols=315 Identities=14% Similarity=0.079 Sum_probs=233.4
Q ss_pred CCCHHHHHHHHHHHhh-ccCCCCCccchhHHHHHHHHHHHHHHHHHH----hC--CCCC-cEEEeCCHHHHHHHHHHhhh
Q psy15216 1404 PIDPRVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQL----IY--ADPR-EIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~-~~~np~~~~~~~~~~~~~~~~~lr~~ia~~----~g--~~~~-~iv~t~gaT~al~~al~~l~ 1475 (2602)
+.++.+.+++.+.++. ...++.. . ...++|++++++ +| ++++ +|++|+|+++|+..++.++.
T Consensus 43 ~~~~~v~~a~~~~~~~~~~~y~~~------~----g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~ 112 (386)
T 1u08_A 43 DGPRYLQERLAHHVAQGANQYAPM------T----GVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALV 112 (386)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCT------T----CCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhhccCCCCC------C----CCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhC
Confidence 4678899999998865 1222221 0 124455566555 46 4677 99999999999999999986
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHhhccCCceEEEEeccccccccccC---h
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 1551 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l 1551 (2602)
++||+|++++++|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++| +
T Consensus 113 ----~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l 185 (386)
T 1u08_A 113 ----RNGDEVICFDPSYDSYAPAIALS---GGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADF 185 (386)
T ss_dssp ----CTTCEEEEEESCCTTHHHHHHHT---TCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred ----CCCCEEEEeCCCchhHHHHHHHc---CCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHH
Confidence 79999999999999987765544 99999999876 5779999999999999999999999999999997 6
Q ss_pred HHHHHHhhhcCCEEEEecccccCc----ccccCC----CCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccC
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGK----IDINIQ----NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 1621 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~----~~~~l~----~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~ 1621 (2602)
++|.++|++||+++|+|++|+... ...++. ..+.++++.|+||.+|++| +||+++++++++.+.+...
T Consensus 186 ~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~-- 263 (386)
T 1u08_A 186 AALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQ-- 263 (386)
T ss_dssp HHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHH--
T ss_pred HHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHH--
Confidence 889999999999999999997521 111221 2357899999999888888 8999998876665544321
Q ss_pred CccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec---CC
Q psy15216 1622 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---IE 1698 (2602)
Q Consensus 1622 ~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~---~~ 1698 (2602)
...++.+...+.++.++|+....++++.++++.++++++.+.|.+ . ++.+..+.. .....+.++. .+
T Consensus 264 -----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---g~~~~~~~~~~~~~~ 333 (386)
T 1u08_A 264 -----YLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNE-S-RLEILPCEG---TYFLLVDYSAVSTLD 333 (386)
T ss_dssp -----HHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTS-S-SCEECCCCB---SSEEEEECTTTCCSC
T ss_pred -----hhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCCc---eEEEEEecCCCCCCC
Confidence 112345555666676777644456788889999999999999987 3 777654322 2233344443 24
Q ss_pred cHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1699 GESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1699 ~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
..++...| +||.+++|..|... ....+++||+++ ++.+++++++++|++
T Consensus 334 ~~~~~~~l~~~~gi~v~~g~~f~~~---------------~~~~~~iRis~~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 334 DVEFCQWLTQEHGVAAIPLSVFCAD---------------PFPHKLIRLCFA--KKESTLLAAAERLRQ 385 (386)
T ss_dssp HHHHHHHHHHHSCEECEEGGGGCSS---------------CCCSCEEEEECC--SCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCEEEeCchHhCCC---------------CCCCCEEEEEEc--CCHHHHHHHHHHHhh
Confidence 55666544 69999998776431 012378999998 489999999999874
No 186
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.90 E-value=2.2e-22 Score=266.00 Aligned_cols=298 Identities=14% Similarity=0.122 Sum_probs=224.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHH-HhCCcEEE
Q psy15216 1432 GWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVT 1510 (2602)
Q Consensus 1432 ~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~ 1510 (2602)
+....+.+.++++++++++|++++++++++|+|.+++.++.++. +++||+|+++.++|+++...+..+ +..|++++
T Consensus 103 ~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~---~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~ 179 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR---ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLL 179 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHH---HHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEE
T ss_pred hhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHh---cCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEE
Confidence 45667788999999999999988888999999966555555543 368999999999999998888654 55699999
Q ss_pred EeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecc-cccCcccccCCCCCccEEE
Q psy15216 1511 YLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAA-QAVGKIDINIQNYKVDLMS 1589 (2602)
Q Consensus 1511 ~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a-~~~g~~~~~l~~~~~D~~v 1589 (2602)
.++. .++.+|+++ |+++|++|+++|| |+||.+.|+++|.++|++||+++++|.. +++|....+ ..+++|+++
T Consensus 180 ~v~~-~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~~~g~D~~~ 252 (438)
T 1wyu_A 180 TLPL-EGGRTPLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-GAYGADIAV 252 (438)
T ss_dssp EECC-BTTBCCCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-HHHTCSEEE
T ss_pred EEcC-cCCccCHHH----hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-ccCCCCEEE
Confidence 9987 457788776 7889999999999 9999999999999999999999998865 666654433 346789999
Q ss_pred Ecccc------ccCCCceEEEEEecCCCCccccccccCCc-----------------cccCCCCCcch---hHHHHHHHH
Q psy15216 1590 FSAHK------IYGPKGIGALYIRRNPRTRIEAQIHGGGH-----------------EYGLRSGTLAT---HQIVGMGEA 1643 (2602)
Q Consensus 1590 ~S~~K------~~gp~G~G~l~~~~~~~~~l~~~~~g~~~-----------------~~~~~~gt~~~---~~~~al~~a 1643 (2602)
+|.|| ++|| |+|++++++++.+.+.+...|+.. ..++..+++++ ..+.++.++
T Consensus 253 ~s~kk~~~~~~~~Gp-~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa 331 (438)
T 1wyu_A 253 GDGQSLGLPMGFGGP-HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGA 331 (438)
T ss_dssp EECTTTTCCCGGGCS-CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHH
T ss_pred ECCcccCCCccCCCC-CeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHH
Confidence 99776 3456 799999998877766543322210 01233466665 556666555
Q ss_pred --HHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEE--ccccc
Q psy15216 1644 --FRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAV--SSGSA 1716 (2602)
Q Consensus 1644 --L~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v--~~g~~ 1716 (2602)
+.. ...+++++.++..++++++.+.|.+ ++|+.+..+. . ......+.++ .+..++...| +||.+ +++..
T Consensus 332 ~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~-~-~~~~~~~~~~-~~~~~~~~~L~~~gi~v~~~~~~~ 407 (438)
T 1wyu_A 332 MYLAALGPEGLREVALKSVEMAHKLHALLLE-VPGVRPFTPK-P-FFNEFALALP-KDPEAVRRALAERGFHGATPVPRE 407 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-STTCEECSCS-S-BCSEEEEECS-SCHHHHHHHHHHTTCCCCEECCTT
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEECCCC-C-eEEEEEEeCC-CCHHHHHHHHHHCCceeccccccc
Confidence 553 3456888999999999999999988 6798887542 1 1222223322 3556777666 78887 44544
Q ss_pred cCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1717 CTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1717 ~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
|. .+++|+|++.++|.+|+++++++|++
T Consensus 408 ~~--------------------~~~lRis~~~~~t~edi~~~~~~l~~ 435 (438)
T 1wyu_A 408 YG--------------------ENLALFAATELHEEEDLLALREALKE 435 (438)
T ss_dssp SC--------------------SSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred cC--------------------CCeEEEEecccCCHHHHHHHHHHHHH
Confidence 32 27899999999999999999999986
No 187
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.90 E-value=6.4e-23 Score=267.13 Aligned_cols=307 Identities=15% Similarity=0.141 Sum_probs=228.4
Q ss_pred CCCHHHHHHHHHHHhhcc-CCCCCccchhHHHHHHHHHHHHHHHHHHh----CC--CCCcEEEeCCHHHHHHHHHHhhhh
Q psy15216 1404 PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLI----YA--DPREIIWTSGATESNNLAIKGAAH 1476 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~-~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g~--~~~~iv~t~gaT~al~~al~~l~~ 1476 (2602)
+.++.+.+++.+.+.... .++.. ....++|+.+++++ |+ +++++++|+|+|+|+..++.++.
T Consensus 54 ~~~~~v~~a~~~~~~~~~~~y~~~----------~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~- 122 (389)
T 1o4s_A 54 PTPEPVVEEAVRFLQKGEVKYTDP----------RGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALL- 122 (389)
T ss_dssp CCCHHHHHHHHHHHTTCCCCCCCT----------TCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCC----------CCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhC-
Confidence 457889999988886421 12211 11355667777766 75 67899999999999999999986
Q ss_pred hhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC--CCCcChhHHHhhccCCceEEEEeccccccccccC---h
Q psy15216 1477 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 1551 (2602)
Q Consensus 1477 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l 1551 (2602)
++||+|++++++|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++| +
T Consensus 123 ---~~gd~Vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l 196 (389)
T 1o4s_A 123 ---DPGDEVIVFSPVWVSYIPQIILA---GGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFL 196 (389)
T ss_dssp ---CTTCEEEEEESCCTTHHHHHHHT---TCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred ---CCCCEEEEcCCCchhHHHHHHHc---CCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHH
Confidence 79999999999999987766544 99999999875 4678999999999999999999999999999998 9
Q ss_pred HHHHHHhhhcCCEEEEecccccCcc---ccc---CCC-CCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCC
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGKI---DIN---IQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGG 1622 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~~---~~~---l~~-~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~ 1622 (2602)
++|.++|++||+++|+|++|+.+.. +.+ +.. .+.|++++|+||.+|++| +||+++++++++.+.+...++
T Consensus 197 ~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~- 275 (389)
T 1o4s_A 197 EGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHT- 275 (389)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhc-
Confidence 9999999999999999999986543 111 221 367999999999888888 899999887666555433211
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHH
Q psy15216 1623 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESL 1702 (2602)
Q Consensus 1623 ~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~ 1702 (2602)
..+.+...+.++.++|+. ++++..+++.++++++.+.|.+ . ++.+..+.. +....+.++ .+..++
T Consensus 276 ------~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~~-~~~~~l 340 (389)
T 1o4s_A 276 ------TSCINTVAQYAALKALEV---DNSYMVQTFKERKNFVVERLKK-M-GVKFVEPEG---AFYLFFKVR-GDDVKF 340 (389)
T ss_dssp ------TCSCCHHHHHHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH-T-TCCCCCCSB---SSEEEEECS-SCHHHH
T ss_pred ------ccCCCHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHh-c-CCeeecCCc---ceEEEEeCC-CCHHHH
Confidence 123344444444445442 2677788889999999999987 4 665543221 222233333 355666
Q ss_pred HHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1703 LMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1703 ~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
...| +||.+++|..|..+ +++|++++ ++.+++++++++|++
T Consensus 341 ~~~l~~~~gi~v~~g~~f~~~-------------------~~~Ris~~--~~~~~l~~~l~~l~~ 384 (389)
T 1o4s_A 341 CERLLEEKKVALVPGSAFLKP-------------------GFVRLSFA--TSIERLTEALDRIED 384 (389)
T ss_dssp HHHHHHHHCEECEEGGGGTCT-------------------TEEEEECC--SCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEeCchhcCCC-------------------CeEEEEEe--CCHHHHHHHHHHHHH
Confidence 6554 59999988776432 68999998 489999999999986
No 188
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.90 E-value=2.3e-22 Score=264.71 Aligned_cols=318 Identities=14% Similarity=0.095 Sum_probs=237.6
Q ss_pred CCCCCHHHHHHHHHHHhhcc--CCCCCccchhHHHHHHHHHHHHHHHHHHhC------------CCCCcEEEeCCHHHHH
Q psy15216 1402 TTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIY------------ADPREIIWTSGATESN 1467 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~~~--~np~~~~~~~~~~~~~~~~~lr~~ia~~~g------------~~~~~iv~t~gaT~al 1467 (2602)
..++++.+.+++.+.++... .++.. ....++|++++++++ +++++|++|+|+++|+
T Consensus 48 ~~~~~~~v~~a~~~~~~~~~~~~y~~~----------~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al 117 (416)
T 1bw0_A 48 NLLTSAAQIKKLKEAIDSQECNGYFPT----------VGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGI 117 (416)
T ss_dssp CSCCCHHHHHHHHHHHHTTCSSSCCCT----------TCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHH
T ss_pred CCCCCHHHHHHHHHHhhCCccCCcCCC----------CCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHH
Confidence 35678899999999886521 12111 124678888888888 6788999999999999
Q ss_pred HHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC--CCCcChhHHHhhccCCceEEEEecccccc
Q psy15216 1468 NLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEI 1545 (2602)
Q Consensus 1468 ~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~id~d~l~~~i~~~t~lv~l~~~~n~t 1545 (2602)
++++.++. ++||+|++++|+|+++...+.. .|++++.++.++ ++.+|+++|+++++++++++++++|+|||
T Consensus 118 ~~~~~~l~----~~gd~vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~npt 190 (416)
T 1bw0_A 118 LMAITAIC----DAGDYALVPQPGFPHYETVCKA---YGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPC 190 (416)
T ss_dssp HHHHHHHC----CTTCEEEEEESCCTHHHHHHHH---TTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTT
T ss_pred HHHHHHhC----CCCCEEEEcCCCcHhHHHHHHH---cCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCC
Confidence 99999986 7999999999999998766554 499999998765 35689999999999999999999999999
Q ss_pred ccccC---hHHHHHHhhhcCCEEEEecccccC----c----ccccCCCC---CccEEEEccccccCCCc--eEEEEEecC
Q psy15216 1546 GVIQP---ILEIGELCRSKGVIFHCDAAQAVG----K----IDINIQNY---KVDLMSFSAHKIYGPKG--IGALYIRRN 1609 (2602)
Q Consensus 1546 G~~~~---l~~I~~ia~~~gi~vivD~a~~~g----~----~~~~l~~~---~~D~~v~S~~K~~gp~G--~G~l~~~~~ 1609 (2602)
|.++| +++|.++|++||+++|+|++|+.. . ...++..+ +.++++.|+||.++++| +||++++++
T Consensus 191 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~ 270 (416)
T 1bw0_A 191 GSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDP 270 (416)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECT
T ss_pred CcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCc
Confidence 99999 999999999999999999998752 2 11222222 23577889999887777 899999874
Q ss_pred --CCCccccccccCCccccCCCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCC
Q psy15216 1610 --PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRI 1686 (2602)
Q Consensus 1610 --~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~ 1686 (2602)
+++.+...... .....++++...+.++.++|+. ...++++..++++++++++.+.|.+ ++++.+..+..
T Consensus 271 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~--- 342 (416)
T 1bw0_A 271 HGNGPSFLEGLKR----VGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGE-CIGLAPTMPRG--- 342 (416)
T ss_dssp TCSCHHHHHHHHH----HHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTT-STTEEECCCCB---
T ss_pred hhhHHHHHHHHHH----HhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcccCCCe---
Confidence 55444321100 0001345677777777777773 2456788889999999999999987 67888764322
Q ss_pred CceEEEEEec------CCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHH
Q psy15216 1687 PHNLNISFNF------IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDF 1757 (2602)
Q Consensus 1687 ~~~~~~~~~~------~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~ 1757 (2602)
.....+.++. .+..++...| +||.+++|..|..+ +++||+++ ++.+++++
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~-------------------~~iRis~~--~~~e~l~~ 401 (416)
T 1bw0_A 343 AMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAP-------------------GFTRLTTT--RPVEVYRE 401 (416)
T ss_dssp TTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCT-------------------TEEEEECC--SCHHHHHH
T ss_pred eEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCC-------------------CeEEEEec--CCHHHHHH
Confidence 2233344542 2445565544 69999998877532 78999996 68999999
Q ss_pred HHHHHHHh
Q psy15216 1758 TIKLLKMK 1765 (2602)
Q Consensus 1758 li~~L~~~ 1765 (2602)
++++|.+.
T Consensus 402 ~l~~l~~~ 409 (416)
T 1bw0_A 402 AVERIKAF 409 (416)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999863
No 189
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.90 E-value=2e-23 Score=270.51 Aligned_cols=330 Identities=16% Similarity=0.145 Sum_probs=230.4
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCE
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 1484 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~ 1484 (2602)
.++.+.+++.+.+...+..+ .....++|+.+++++|.+ ++++++|+|+|++.++.++. +++||+
T Consensus 15 ~~~~~~~a~~~~~~~~~~~~-----------~~~~~~l~~~la~~~~~~--~~i~~~sgt~al~~~l~~l~---~~~gd~ 78 (373)
T 3frk_A 15 IEYEIKFKFEEIYKRNWFIL-----------GDEDKKFEQEFADYCNVN--YCIGCGNGLDALHLILKGYD---IGFGDE 78 (373)
T ss_dssp HHHHHHHHHHHHHHHTCCSS-----------SHHHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHTT---CCTTCE
T ss_pred CCHHHHHHHHHHHHCCCccC-----------CchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcC---CCCcCE
Confidence 35677888888776532211 135788999999999975 89999999999999999983 389999
Q ss_pred EEEcCCCCcchHHHHHHHHhCCcEEEEeccC-CCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCC
Q psy15216 1485 IITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGV 1563 (2602)
Q Consensus 1485 Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi 1563 (2602)
|+++.++|+++...+... |+++++++.+ .++.+|++++++++++++++|+ ++||||.+.|+++|.++|++||+
T Consensus 79 Vi~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~ 152 (373)
T 3frk_A 79 VIVPSNTFIATALAVSYT---GAKPIFVEPDIRTYNIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKYNL 152 (373)
T ss_dssp EEEETTSCTHHHHHHHHH---SCEEEEECEETTTTEECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHHTC
T ss_pred EEECCCCcHHHHHHHHHc---CCEEEEEeccccccCcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHHHHHcCC
Confidence 999999999988887666 9999999987 4678999999999999999888 67789999999999999999999
Q ss_pred EEEEecccccCcccccCCCCC--ccEEEEccc--cccCCCc-eEEEEEecC-CCCccccccccCCccc--cCCCCCcchh
Q psy15216 1564 IFHCDAAQAVGKIDINIQNYK--VDLMSFSAH--KIYGPKG-IGALYIRRN-PRTRIEAQIHGGGHEY--GLRSGTLATH 1635 (2602)
Q Consensus 1564 ~vivD~a~~~g~~~~~l~~~~--~D~~v~S~~--K~~gp~G-~G~l~~~~~-~~~~l~~~~~g~~~~~--~~~~gt~~~~ 1635 (2602)
++|+|++|+.|.. ++...++ .|++++||| |.+|+.| .|+++.+++ +.+.+.+...++.... ....|...
T Consensus 153 ~li~D~a~~~g~~-~~~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~-- 229 (373)
T 3frk_A 153 KLIEDAAQAHGSL-YKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNS-- 229 (373)
T ss_dssp EEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBC--
T ss_pred EEEEECCcccCCE-ECCEeccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccC--
Confidence 9999999998875 4544455 799999966 8777633 577777643 4444444443332211 11112111
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEc
Q psy15216 1636 QIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVS 1712 (2602)
Q Consensus 1636 ~~~al~~aL~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~ 1712 (2602)
.+..+.+++... ...+++..++.+++.+++.+.|.+ ++ +.+...+....+....+.+...+...+...| +||.++
T Consensus 230 ~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~ 307 (373)
T 3frk_A 230 RLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINN-PN-VIIPVEADYAKHVWYTFVIRSEKRDELQKYLNNNGIGTL 307 (373)
T ss_dssp CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCC-TT-EECCCCCTTEECCCSSEEEEESSHHHHHHHHHHTTBCCB
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-Cc-eEeccCCCCCceeeEEEEEEeCCHHHHHHHHHHCCCCcc
Confidence 112233333322 245677888889999999999977 55 6654332222222223344444667777777 799988
Q ss_pred cccccCCCCCChhHHHHHcCCC-------ccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1713 SGSACTSASLEPSYVLRALGCN-------DELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1713 ~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
++..+.. +..+.+ ..++.. +....+.+|+|+++++|.+||++++++|++
T Consensus 308 ~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~ 363 (373)
T 3frk_A 308 IHYPIPI-HLQQAY--KDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINA 363 (373)
T ss_dssp CSCSSCG-GGSGGG--GGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred cCcCCcc-ccChHH--HhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 6542111 111111 112221 112237899999999999999999999997
No 190
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.90 E-value=1.2e-22 Score=269.41 Aligned_cols=325 Identities=14% Similarity=0.107 Sum_probs=241.2
Q ss_pred CCCCHHHHHHHHHHHhh-c-cCCCCCccchhHHHHHHHHHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHHHhh
Q psy15216 1403 TPIDPRVVDKMIPYLRV-Q-FGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGA 1474 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~-~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g------~~~~~iv~t~gaT~al~~al~~l 1474 (2602)
.+.++.+.+++.+.+.. . .+++.. ....++|+.++++++ +++++|++|+|+|+|+++++.++
T Consensus 56 ~~~~~~v~~a~~~~~~~~~~~~y~~~----------~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l 125 (437)
T 3g0t_A 56 LPAPQIGIETEIQKLREGVASIYPNL----------DGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVA 125 (437)
T ss_dssp SCCCHHHHHHHHHHHHHTGGGSCCCT----------TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCCcCcCCCCC----------CChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHH
Confidence 45678999999998874 2 233322 013567778888776 57789999999999999999987
Q ss_pred hhhhccCCC--EEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHhhc-cCCceEEEEeccccccccccC
Q psy15216 1475 AHFYKKRGK--HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKI-CSDTILVSVMLVNNEIGVIQP 1550 (2602)
Q Consensus 1475 ~~~~~~~gd--~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~~i-~~~t~lv~l~~~~n~tG~~~~ 1550 (2602)
. .+++|| +|+++.++|+++...+... |++++.++.++ ++.+|+++|++++ ++++++|++++|+||||.++|
T Consensus 126 ~--~~~~gd~~~Vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~ 200 (437)
T 3g0t_A 126 N--RTHKNREYGTLFIDPGFNLNKLQCRIL---GQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMT 200 (437)
T ss_dssp T--TSCTTCSCCEEEEESCCHHHHHHHHHH---TCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCC
T ss_pred h--cCCCCCccEEEEeCCCcHhHHHHHHHc---CCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCC
Confidence 4 126899 9999999999988877766 89999999864 4568999999999 789999999999999999998
Q ss_pred ---hHHHHHHhhhcCCEEEEecccccCc----ccc--------cCCC-CCccEEEEccccccCCCc--eEEEEEecCCCC
Q psy15216 1551 ---ILEIGELCRSKGVIFHCDAAQAVGK----IDI--------NIQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRT 1612 (2602)
Q Consensus 1551 ---l~~I~~ia~~~gi~vivD~a~~~g~----~~~--------~l~~-~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~ 1612 (2602)
+++|+++|++||+++|+|++|+... .++ .+.. .+.++++.|+||.+|++| +||+++++++++
T Consensus 201 ~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 280 (437)
T 3g0t_A 201 DEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYE 280 (437)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHH
T ss_pred HHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhh
Confidence 6778999999999999999997522 221 2222 456799999999888777 899999877665
Q ss_pred -cccccccc----------CCccccCCCCCcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhcCCcEEE
Q psy15216 1613 -RIEAQIHG----------GGHEYGLRSGTLATHQIVGMGEAFRLARIE---MKEELKRILFLQKRLYNGLMESIEEIYI 1678 (2602)
Q Consensus 1613 -~l~~~~~g----------~~~~~~~~~gt~~~~~~~al~~aL~~~~~~---~~~~~~~~~~l~~~l~~~L~~~~~gl~i 1678 (2602)
.+..+..+ .........++++...+.++.++|+....+ +++.++++.++++++.+.|.+ . ++.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~ 358 (437)
T 3g0t_A 281 REYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLD-N-GFNI 358 (437)
T ss_dssp CBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHT-T-TEEE
T ss_pred hhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCEE
Confidence 51110000 000011113466777777777777754433 788899999999999999988 4 8877
Q ss_pred e------CCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCC
Q psy15216 1679 N------GDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFT 1750 (2602)
Q Consensus 1679 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~ 1750 (2602)
. .++.. .....+.++..+..++...| +||.++++..|... ..+++|||++. .
T Consensus 359 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~-----------------~~~~iRis~~~-~ 418 (437)
T 3g0t_A 359 VYDKDGNEPLAD--GFYFTVGYKGMDSSKLIEKFVRYGMCAITLKTTGSK-----------------RNEAMRICTSL-L 418 (437)
T ss_dssp SSCEETTEECCS--SSEEEEEETTCCHHHHHHHHHHTTEECEESTTTTCC-----------------CTTCEEEECSS-S
T ss_pred eccccCCCCCce--eEEEEEecCCCCHHHHHHHHHHcCeEEeeccccCCC-----------------CCCEEEEEEec-C
Confidence 6 22111 23344555555667777776 89999998877542 12679999994 4
Q ss_pred CHHHHHHHHHHHHH
Q psy15216 1751 TEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1751 t~edid~li~~L~~ 1764 (2602)
+.+++++++++|++
T Consensus 419 ~~e~i~~~~~~l~~ 432 (437)
T 3g0t_A 419 PESQFPDLEKRLQM 432 (437)
T ss_dssp CGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 89999999999987
No 191
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.90 E-value=2.2e-22 Score=263.10 Aligned_cols=321 Identities=12% Similarity=0.002 Sum_probs=237.4
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC---CCC-cEEEeCCHHHHHHHHHHhcccccc
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA---DPR-EIIWTSGATESNNLAIKGAAHFYK 83 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~---~~~-~Iv~t~g~T~al~~~~~~l~~~~~ 83 (2602)
++|+.+.+++.+.+.....++... ...++.+.+.+++++.+|. +++ +|++|+|+++|+++++.++.
T Consensus 43 ~~~~~v~~a~~~~~~~~~~y~~~~------g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~---- 112 (396)
T 3jtx_A 43 PTPKVITDALTASLHELEKYPLTA------GLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVL---- 112 (396)
T ss_dssp CCCHHHHHHHHHTGGGGGSCCCTT------CCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHhhhccCCCCCC------CcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHh----
Confidence 678899999999886655555431 1123455555566666674 488 99999999999999999987
Q ss_pred cCC-----CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC-CccChHHHHhhccCCceEEEEecccCcccccccHHH
Q psy15216 84 KRG-----KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILE 157 (2602)
Q Consensus 84 ~~g-----d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~ 157 (2602)
++| |+|+++.+.|+++...+... |++++.++.+++ +.+|+++|++++++++++|++++|+||||.++|.++
T Consensus 113 ~~g~~~~~d~vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 189 (396)
T 3jtx_A 113 NPVSDGIKPAIVSPNPFYQIYEGATLLG---GGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDG 189 (396)
T ss_dssp CC---CCCCEEEEEESCCHHHHHHHHHT---TCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHH
T ss_pred CCCCccCCCEEEEcCCCcHhHHHHHHHc---CCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHH
Confidence 786 79999999999887766554 999999998554 468999999999889999999999999999998666
Q ss_pred ---HHHHHHhcCCEEEEecccccccc----cccC--------CCCCccEEEeccccccCCCC--cEEEEEecCCCCcccc
Q psy15216 158 ---IGELCRSKGVIFHCDAAQAVGKI----DINI--------QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEA 220 (2602)
Q Consensus 158 ---I~~la~~~g~~livD~a~a~g~~----~~dl--------~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~ 220 (2602)
|+++|++||+++|+|++|+.... ++.. ...+.++++.|+||.+|++| +||++.++++++.+..
T Consensus 190 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (396)
T 3jtx_A 190 WKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLL 269 (396)
T ss_dssp HHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHHH
Confidence 88899999999999999975321 2211 02456799999999888777 7999998877766654
Q ss_pred eecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc
Q psy15216 221 QIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF 300 (2602)
Q Consensus 221 ~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~ 300 (2602)
.. ....++++.+...++.++++. ..++++.++++.++++++.+.|.+ . +.+..+. ...+..+.++.
T Consensus 270 ~~-------~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~-~--~~~~~~~---~~~~~~~~~~~ 335 (396)
T 3jtx_A 270 YR-------TYHGSAMSIPVQRASIAAWDD-EQHVIDNRRLYQEKFERVIPILQQ-V--FDVKLPD---ASFYIWLKVPD 335 (396)
T ss_dssp HH-------HHHTCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHTT-T--SCCCCCS---SSSEEEEECTT
T ss_pred HH-------hhcccCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHh-c--CCccCCC---eeEEEEEECCC
Confidence 32 122356777777777777763 345778888899999999999976 2 2222222 12344455555
Q ss_pred cChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 301 IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 301 ~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
.+..++...| +||.+.+|..|.... .......+++||+++. +++++++++++|++
T Consensus 336 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~-----------~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~ 393 (396)
T 3jtx_A 336 GDDLAFARNLWQKAAIQVLPGRFLARDT-----------EQGNPGEGYVRIALVA--DVATCVKAAEDIVS 393 (396)
T ss_dssp SCHHHHHHHHHHHHCEECEEGGGGCCCC-----------TTCCTTTTEEEEECCS--CHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCEEEeCChHhCCcc-----------cccCCCCCeEEEEEcC--CHHHHHHHHHHHHH
Confidence 4666777666 499999999886520 0011234899999985 89999999999985
No 192
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.90 E-value=1.2e-22 Score=265.02 Aligned_cols=312 Identities=15% Similarity=0.133 Sum_probs=227.9
Q ss_pred CCCCHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g--~~~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
.+.++.+.+++.+.+... .+++. .....++|+.+++++ | +++++|++|+|+|+|++.++.++.
T Consensus 43 ~~~~~~v~~a~~~~~~~~~~~y~~----------~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~ 112 (391)
T 3h14_A 43 TGAPRGAVEALAKSLETDALGYTV----------ALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALF 112 (391)
T ss_dssp SCSCHHHHHHHHHHHC--------------------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHhcCCCCCCC----------CCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhc
Confidence 356788999998888641 11111 112456677777766 3 577899999999999999999987
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC--CCcChhHHHhhccCCceEEEEeccccccccccC---
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP--- 1550 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~--~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~--- 1550 (2602)
++||+|+++.|+|+++...++.. |++++.++.+++ +.+|+++++++ ++++|++++|+||||.++|
T Consensus 113 ----~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~ 182 (391)
T 3h14_A 113 ----DSGDRVGIGAPGYPSYRQILRAL---GLVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAA 182 (391)
T ss_dssp ----CTTCEEEEEESCCHHHHHHHHHT---TCEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTCCCCCHHH
T ss_pred ----CCCCEEEEcCCCCccHHHHHHHc---CCEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCCccCCHHH
Confidence 89999999999999987666554 999999998763 46899999987 8999999999999999999
Q ss_pred hHHHHHHhhhcCCEEEEecccccCcc---cccCCC-CCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCCcc
Q psy15216 1551 ILEIGELCRSKGVIFHCDAAQAVGKI---DINIQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHE 1624 (2602)
Q Consensus 1551 l~~I~~ia~~~gi~vivD~a~~~g~~---~~~l~~-~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~ 1624 (2602)
+++|+++|++||+++|+|++|+.... +..... .+.++++.|+||.+|++| +||+++++++++.+.....
T Consensus 183 l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~----- 257 (391)
T 3h14_A 183 MGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQ----- 257 (391)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHHHH-----
T ss_pred HHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHHHHh-----
Confidence 88899999999999999999874321 222222 245688889999888777 7999998876665543321
Q ss_pred ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe--cCCcHHH
Q psy15216 1625 YGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--FIEGESL 1702 (2602)
Q Consensus 1625 ~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~--~~~~~~~ 1702 (2602)
...++++...+.++.+++. ....+++.++++.++++++.+.|.+ . ++....++.. .....+.++ ..+..++
T Consensus 258 --~~~~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~l~~-~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 330 (391)
T 3h14_A 258 --NMFICAPHASQVAALAALD-CDAELQANLDVYKANRKLMLERLPK-A-GFTRIAPPDG--AFYVYADVSDLTDDSRAF 330 (391)
T ss_dssp --HTTCCCCHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHH-H-TCCCBCCCCB--TTEEEEECTTTCSCHHHH
T ss_pred --hhccCCCHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHH-c-CCCcccCCCe--eEEEEEecCccCCCHHHH
Confidence 1234566666666667776 3456788889999999999999987 3 3222212221 122333444 2355667
Q ss_pred HHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1703 LMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1703 ~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
...| +||.+++|..|... ...+++|++++. +.+++++++++|++
T Consensus 331 ~~~l~~~~gi~v~~g~~~~~~----------------~~~~~iRis~~~--~~~~i~~~l~~l~~ 377 (391)
T 3h14_A 331 AAEILEKAGVAVTPGLDFDPE----------------RGAGTLRFSYAR--ATADIEEGLDRLEA 377 (391)
T ss_dssp HHHHHHHHCEECEEGGGTCTT----------------TGGGEEEEECCS--CHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEcCchhhCCC----------------CCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 6664 49999999988652 113799999986 78999999999987
No 193
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.90 E-value=1.7e-22 Score=263.57 Aligned_cols=334 Identities=13% Similarity=0.104 Sum_probs=220.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
.|+.++++..+.+.+++.. +.++.. .|.+++...+..+++++++++++|.+ +.++++|+++|+++++.++.
T Consensus 31 p~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~r~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~- 101 (398)
T 1gc0_A 31 PVYQTATFTFPTVEYGAAC-----FAGEQA-GHFYSRISNPTLNLLEARMASLEGGE--AGLALASGMGAITSTLWTLL- 101 (398)
T ss_dssp CBCCCSCBCCC---------------------------CCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC-
T ss_pred CccCCCccccCCHHHHHHh-----hcCCcC-CCcccCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh-
Confidence 3677788777777666542 223322 34444445567899999999999986 55666666899999999987
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHH-HhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIG 159 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~ 159 (2602)
++||+|+++.+.|+++...+..+ ...|++++.++.+ |+++++++++++|++|++++|+||||.+.|+++|.
T Consensus 102 ---~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~ 173 (398)
T 1gc0_A 102 ---RPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-----DLQALEAAMTPATRVIYFESPANPNMHMADIAGVA 173 (398)
T ss_dssp ---CTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred ---cCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHH
Confidence 79999999999999988877544 5679999999853 89999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecccccccccccCCCCCccEEEeccccccCCCC---cEEEEEecCCCC-cccceecCCCccccccccC
Q psy15216 160 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKG---IGALYIRRNPRT-RIEAQIHGGGHEYGLRSGT 235 (2602)
Q Consensus 160 ~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G---~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~gt 235 (2602)
++|++||+++|+|++|+.+.....+ .+++|+++.|+||++|.+| .|+++++++.+. .+.+...+ +..++
T Consensus 174 ~l~~~~~~~li~D~~~~~~~~~~~~-~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~------~~~~~ 246 (398)
T 1gc0_A 174 KIARKHGATVVVDNTYCTPYLQRPL-ELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKD------MTGAV 246 (398)
T ss_dssp HHHGGGTCEEEEECTTTHHHHCCGG-GGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHH------HTCCC
T ss_pred HHHHHcCCEEEEECCCcccccCCch-hhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhc------cCCCC
Confidence 9999999999999999877654333 3578999999999777544 599999876544 34332211 12345
Q ss_pred cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCce--------------EEeCCCCCCCCceEEEEEccc
Q psy15216 236 LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEI--------------YINGDMNNRIPHNLNISFNFI 301 (2602)
Q Consensus 236 ~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~--------------~l~~~~~~~~~~~~~~~~~~~ 301 (2602)
.+....+++..+++.. ....++..++++.+.+.|.+ .+.+ .++.+.....+.++.+.++..
T Consensus 247 ~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~L~~-~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (398)
T 1gc0_A 247 LSPHDAALLMRGIKTL----NLRMDRHCANAQVLAEFLAR-QPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGG 321 (398)
T ss_dssp CCHHHHHHHHHHHTTH----HHHHHHHHHHHHHHHHHHHT-CTTEEEEEEC----------------CCTTEEEEEETTH
T ss_pred CCHHHHHHHHhccchH----HHHHHHHHHHHHHHHHHHhc-CCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCC
Confidence 6666555555566533 34444555556666666655 3332 222221112345556666532
Q ss_pred --ChhHHHHHhCCeEEcc---ccc------CCCC--CCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 302 --EGESLLMAIKDIAVSS---GSA------CTSA--SLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 302 --~~~~~~~~L~gI~v~~---g~~------~~~~--~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
....++.. .++.++. |.. |... ...++..+..+|++ +++||||++.++++++++.+.++|++
T Consensus 322 ~~~~~~~l~~-~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~----~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 322 IGAGRRFMNA-LQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGIS----EGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp HHHHHHHHHH-CSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCC----TTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCceeccCCCCcceeeecccccccccCCHHHHHhcCCC----CCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 12233333 3444433 422 2211 12345666777876 38999999999999999999999985
No 194
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.90 E-value=6.7e-22 Score=260.62 Aligned_cols=317 Identities=15% Similarity=0.148 Sum_probs=239.8
Q ss_pred CCCHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCC
Q psy15216 1404 PIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 1482 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~g 1482 (2602)
..++.+.+++.+.+... .+++.+ ...........++++++++++|.+ +.++++++++|+..++.++. ++|
T Consensus 78 ~~~~~v~~a~~~~~~~~~~~~~~~---~~~~G~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~al~~l~----~~g 148 (427)
T 2w8t_A 78 TFDPDVIAAGKEALEKFGSGTCGS---RMLNGTFHDHMEVEQALRDFYGTT--GAIVFSTGYMANLGIISTLA----GKG 148 (427)
T ss_dssp GGCHHHHHHHHHHHHHHCSCCCSC---TTTTCCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHS----CTT
T ss_pred CCCHHHHHHHHHHHHHhCCCCccc---ccccCCcHHHHHHHHHHHHHhCCC--ceEEecCcHHHHHHHHHHhc----CCC
Confidence 46788999999988762 223221 111222356788999999999975 66777788889999888876 899
Q ss_pred CEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC----CceEEEEeccccccccccChHHHHHHh
Q psy15216 1483 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS----DTILVSVMLVNNEIGVIQPILEIGELC 1558 (2602)
Q Consensus 1483 d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~----~t~lv~l~~~~n~tG~~~~l~~I~~ia 1558 (2602)
|.|+++.+.|+++...+... |++++.++. .|+++|++++.+ ++++|++++++||||.+.|+++|.++|
T Consensus 149 d~vl~~~~~h~~~~~~~~~~---g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~ 220 (427)
T 2w8t_A 149 EYVILDADSHASIYDGCQQG---NAEIVRFRH-----NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVA 220 (427)
T ss_dssp CEEEEETTCCHHHHHHHHHS---CSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHH
T ss_pred CEEEECCcccHHHHHHHHHc---CCeeEEeCC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHH
Confidence 99999999999988776554 889888863 689999999976 789999999999999999999999999
Q ss_pred hhcCCEEEEecccccCccc---------ccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccccCCccccCCC
Q psy15216 1559 RSKGVIFHCDAAQAVGKID---------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRS 1629 (2602)
Q Consensus 1559 ~~~gi~vivD~a~~~g~~~---------~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 1629 (2602)
++||+++|+|++|+.+... +++. .++|++++|+||.+|++| ||+++++++++.+.+.... ....
T Consensus 221 ~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~-~~~di~~~s~sK~~g~~g-G~v~~~~~l~~~l~~~~~~-----~~~~ 293 (427)
T 2w8t_A 221 KKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLE-GQIDFVVGTFSKSVGTVG-GFVVSNHPKFEAVRLACRP-----YIFT 293 (427)
T ss_dssp HHTTCEEEEECTTTTTTSSTTSCCHHHHTTCT-TCCSEEEEESSSTTCSCC-EEEEECCTTGGGGGGTCHH-----HHSS
T ss_pred HHcCCEEEEECCccccccCCCCCchHhhcCCC-cCCcEEEecchhhhccCC-CEEEeCHHHHHHHHHhccc-----cccc
Confidence 9999999999999876543 3332 257999999999888888 9999998887776543110 0113
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-CCcHHHHHhc--
Q psy15216 1630 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI-- 1706 (2602)
Q Consensus 1630 gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~L-- 1706 (2602)
++.+..+++++.++|+... .+++.++++.++++++++.|.+ . ++.+..++ . ...+..+.++. .+..++...|
T Consensus 294 ~~~~~~~~aa~~~al~~~~-~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~~L~~ 368 (427)
T 2w8t_A 294 ASLPPSVVATATTSIRKLM-TAHEKRERLWSNARALHGGLKA-M-GFRLGTET-C-DSAIVAVMLEDQEQAAMMWQALLD 368 (427)
T ss_dssp CCCCHHHHHHHHHHHHHHT-SCHHHHHHHHHHHHHHHHHHHH-H-TCEESCSS-C-CSSEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHH-c-CCcccCCC-C-CCCEEEEEECCHHHHHHHHHHHHH
Confidence 5667777777777887643 2577888999999999999988 3 67765332 1 12334444432 2344566555
Q ss_pred CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1707 KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1707 ~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+||.+.++..+..+ ...+++|++++.++|.+|+++++++|++.
T Consensus 369 ~Gi~v~~~~~~~~~----------------~~~~~lRi~~~~~~t~e~i~~~~~~l~~~ 411 (427)
T 2w8t_A 369 GGLYVNMARPPATP----------------AGTFLLRCSICAEHTPAQIQTVLGMFQAA 411 (427)
T ss_dssp TTEECEEECTTTSC----------------TTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCeEEeeeCCCCCC----------------CCCeEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 79999988755432 11368999999999999999999999974
No 195
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.90 E-value=2e-23 Score=226.91 Aligned_cols=138 Identities=41% Similarity=0.572 Sum_probs=127.9
Q ss_pred eeccccccceEeeeccEEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCCCCCcc
Q psy15216 1010 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 1089 (2602)
Q Consensus 1010 ~~dv~~~~~gi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~ 1089 (2602)
+.||+|+|||+++.+|.|.+|||||++||+++++.|+|..|+|+.+.|.|||||+..+.+|..||+|.|+|+||+|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEECCCeeEEEEEEEecCCceEEEEEecC-CCCCHHHHHhhhhccccCCCchhHHH
Q psy15216 1090 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPF-YNMNLDEIKNGAIFNENSGISLCDAL 1149 (2602)
Q Consensus 1090 ~i~v~f~~d~~g~l~v~a~~~~~g~~~~~~~~~~-~~l~~~~i~~~~~~~~~~g~~~~~~~ 1149 (2602)
+|+|+|+||.||+|+|+|.++.||++..++|... .+||++||++|+ ++++-+..-+..
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~--~~a~~~~~~D~~ 140 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMV--EEAEKFASEDAS 140 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHH--HHHHHTHHHHHH
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHH--HHHHHHHHhhHH
Confidence 9999999999999999999999999999999988 569999999986 666555444433
No 196
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.89 E-value=1.8e-22 Score=266.92 Aligned_cols=316 Identities=15% Similarity=0.097 Sum_probs=235.0
Q ss_pred CCHHHHHHHHHHHhhh----cCCCCCCCcchhhhHHHHHHHHHHHHHHHh----CC-CCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 9 IDPRVVDKMIPYLRVQ----FGNPASRNHIYGWTAEKAIEKARNEVAQLI----YA-DPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~----~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g~-~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
+++.+.+++.+.+... ..++.. ....++|+++++++ |+ ++++|++|+|+++|+++++.++.
T Consensus 92 p~~~v~~a~~~~l~~~~~~~~~Y~~~----------~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~ 161 (448)
T 3aow_A 92 PKEIIRDILVEIMEKYADKALQYGTT----------KGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFL 161 (448)
T ss_dssp CHHHHHHHHHHHHHHSHHHHHSCCCT----------TCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhhhHHHhCCCCC----------CCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHc
Confidence 5667888888877541 222211 12356677777777 98 77899999999999999999987
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhcc----C--CceEE-EEecccCccccc
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC----S--DTILV-SVMLVNNEIGVI 152 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~----~--~tklv-~i~~~~npTG~~ 152 (2602)
++||+|+++.|.|+++...+.. .|++++.++.++++ +|+++|+++++ + ++++| ++++++||||.+
T Consensus 162 ----~~Gd~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~ 233 (448)
T 3aow_A 162 ----NPGDIVVVEAPTYLAALQAFNF---YEPQYIQIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT 233 (448)
T ss_dssp ----CTTCEEEEEESCCHHHHHHHHT---TCCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC
T ss_pred ----CCCCEEEEeCCChHHHHHHHHH---cCCEEEEeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCC
Confidence 7999999999999997766654 49999999987665 99999999997 5 78987 579999999999
Q ss_pred ccH---HHHHHHHHhcCCEEEEecccccccc----cc---cCCCCCccEEEeccccccCCCC--cEEEEEecCCCCcccc
Q psy15216 153 QPI---LEIGELCRSKGVIFHCDAAQAVGKI----DI---NIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEA 220 (2602)
Q Consensus 153 ~~l---~~I~~la~~~g~~livD~a~a~g~~----~~---dl~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~ 220 (2602)
+|. ++|.++|++||+++|+|++|+.... .. .+...+.++++.|++|.+| +| +||+++++++++.+..
T Consensus 234 ~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~ 312 (448)
T 3aow_A 234 MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEI 312 (448)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCHHHHHHHHH
Confidence 984 5889999999999999999976432 11 2222345789999999888 77 7999999887776654
Q ss_pred eecCCCccccccccCcchhHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHhhccC-ceEEeCCCCCCCCceEEEE
Q psy15216 221 QIHGGGHEYGLRSGTLATHQIVGMGEAFRL--ARIEMKEELKRILFLQKRLYNGLMESIE-EIYINGDMNNRIPHNLNIS 297 (2602)
Q Consensus 221 ~~~g~~~~~~~~~gt~~~~~~~al~~al~~--~~~~~~~~~~~~~~l~~~l~~~L~~~~~-g~~l~~~~~~~~~~~~~~~ 297 (2602)
.... ...+++.+...++.++|+. ...++++.+++++++++++.+.|.+.+| ++.+..+.. ..++.+.
T Consensus 313 ~~~~-------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~---g~~~~v~ 382 (448)
T 3aow_A 313 AKQS-------TDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEG---GMFIWVT 382 (448)
T ss_dssp HHHH-------HHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSB---SSEEEEE
T ss_pred HHHH-------hcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCc---cEEEEEE
Confidence 3211 1224466666666677763 2455778888888999999999987456 677764432 2344455
Q ss_pred Ecc-cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 298 FNF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 298 ~~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++. .+..++...| +||.+.+|..|.+. ....+++|++++. .++++++.++++|++.
T Consensus 383 ~~~~~~~~~l~~~l~~~gV~v~pg~~f~~~---------------~~~~~~iRls~~~-~~~e~i~~~~~~L~~~ 441 (448)
T 3aow_A 383 LPDGIDSKKMLERAIKKGVAYVPGEAFYAH---------------RDVKNTMRLNFTY-VDEDKIMEGIKRLAET 441 (448)
T ss_dssp CSTTCCHHHHHHHHHHTTEECEEGGGGSTT---------------CCCCSEEEEECSS-SCTHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHCCcEEEcchhhcCC---------------CCCCCEEEEEeCC-CCHHHHHHHHHHHHHH
Confidence 542 4566777766 79999999877542 0123789999986 4889999999999864
No 197
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.8e-22 Score=267.55 Aligned_cols=318 Identities=14% Similarity=0.121 Sum_probs=234.3
Q ss_pred CCCHHHHHHHHHHHhh--hcCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 8 PIDPRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~--~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g--~~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
++|+.+.+++.+.+.. ...++.. . ...++|+++++++ | .++++|++|+|+++|+.+++.++.
T Consensus 70 ~~~~~v~~a~~~~~~~~~~~~Y~~~------~----g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~ 139 (447)
T 3b46_A 70 SPPQFAIKEAQKALDIPMVNQYSPT------R----GRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLL 139 (447)
T ss_dssp CCCHHHHHHHHHHTTSGGGGSCCCT------T----CCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHhCcCCCCCCCC------C----CCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHc
Confidence 4678999999988764 1222211 1 1345566666665 5 356789999999999999999987
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC------------CCccChHHHHhhccCCceEEEEecccC
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN------------NGLITLSQLEEKICSDTILVSVMLVNN 147 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~------------~~~ld~e~l~~~i~~~tklv~i~~~~n 147 (2602)
++||+|+++.|.|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+|
T Consensus 140 ----~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~n 212 (447)
T 3b46_A 140 ----NAGDEVIVFEPFFDQYIPNIELC---GGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHN 212 (447)
T ss_dssp ----CTTCEEEEEESCCTTHHHHHHHT---TCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCT
T ss_pred ----CCCCEEEEeCCCchhHHHHHHHc---CCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCCC
Confidence 79999999999999987766554 99999998754 357999999999999999999999999
Q ss_pred ccccccc---HHHHHHHHHhcCCEEEEecccccccc---cccCC-----CCCccEEEeccccccCCCC--cEEEEE-ecC
Q psy15216 148 EIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI---DINIQ-----NYKVDLMSFSAHKIYGPKG--IGALYI-RRN 213 (2602)
Q Consensus 148 pTG~~~~---l~~I~~la~~~g~~livD~a~a~g~~---~~dl~-----~~~~D~~~~S~~K~~Gp~G--~G~l~~-~~~ 213 (2602)
|||.++| +++|+++|++||+++|+|++|+.... ...+. ..+.++++.|+||.+|++| +||+++ +++
T Consensus 213 ptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~ 292 (447)
T 3b46_A 213 PIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAE 292 (447)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHH
T ss_pred CCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHH
Confidence 9999985 78899999999999999999975321 11221 2357899999999988888 899999 877
Q ss_pred CCCcccceecCCCccccccccCcchhHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCC
Q psy15216 214 PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIP 291 (2602)
Q Consensus 214 ~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~--~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~ 291 (2602)
+++.+.... ....++.+.+...++.++|+.. ..++++.+++++++++++.+.|.+ . |+.+..+.. .
T Consensus 293 l~~~l~~~~-------~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---g 360 (447)
T 3b46_A 293 LLSYAAKAH-------TRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDE-L-GLPYTAPEG---T 360 (447)
T ss_dssp HHHHHHHHH-------HHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-H-TCCEECCSB---S
T ss_pred HHHHHHHHH-------hhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCCe---e
Confidence 766654322 1123455666677777888754 455788899999999999999987 3 666654432 2
Q ss_pred ceEEEEEccc----------------ChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCC
Q psy15216 292 HNLNISFNFI----------------EGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR 352 (2602)
Q Consensus 292 ~~~~~~~~~~----------------~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~ 352 (2602)
....+.++.. +..++...| +||.+.+|..|.... ......+++||+++.
T Consensus 361 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~------------~~~~~~~~iRls~~~ 428 (447)
T 3b46_A 361 YFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKE------------HEKAAENLLRFAVCK 428 (447)
T ss_dssp SEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGG------------GGGGGTTEEEEECCS
T ss_pred EEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCC------------ccCCCCCEEEEEEeC
Confidence 2334444431 233566555 699999988775320 000114799999984
Q ss_pred CCCHHHHHHHHHHHHh
Q psy15216 353 FTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 353 ~~t~edid~li~~L~~ 368 (2602)
+++++++++++|++
T Consensus 429 --~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 429 --DDAYLENAVERLKL 442 (447)
T ss_dssp --CHHHHHHHHHHGGG
T ss_pred --CHHHHHHHHHHHHH
Confidence 89999999999985
No 198
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.89 E-value=9.3e-23 Score=269.03 Aligned_cols=323 Identities=15% Similarity=0.111 Sum_probs=235.7
Q ss_pred CCCHHHHHHHHHHHhhh---cCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCC-CcEEEeCCHHHHHHHHHHhcccc
Q psy15216 8 PIDPRVVDKMIPYLRVQ---FGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADP-REIIWTSGATESNNLAIKGAAHF 81 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~---~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g--~~~-~~Iv~t~g~T~al~~~~~~l~~~ 81 (2602)
++|+.+.+++.+.+... ..++.. ....++.+.+.+++.+.+| +++ ++|++|+|+++|+++++.++.
T Consensus 41 ~~~~~v~~a~~~~~~~~~~~~~y~~~------~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~-- 112 (422)
T 3fvs_A 41 PPPDFAVEAFQHAVSGDFMLNQYTKT------FGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALV-- 112 (422)
T ss_dssp CCCHHHHHHHHHHHHSCGGGGSCCCT------TCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHhCCCccCCCCCC------CCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHc--
Confidence 57899999999988752 122221 1112334444444444455 455 689999999999999999987
Q ss_pred cccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC------------CCccChHHHHhhccCCceEEEEecccCcc
Q psy15216 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN------------NGLITLSQLEEKICSDTILVSVMLVNNEI 149 (2602)
Q Consensus 82 ~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~------------~~~ld~e~l~~~i~~~tklv~i~~~~npT 149 (2602)
++||+|+++.+.|+++...+... |++++.++.++ ++.+|++++++++++++++|++++|+|||
T Consensus 113 --~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~npt 187 (422)
T 3fvs_A 113 --DEGDEVIIIEPFFDCYEPMTMMA---GGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPL 187 (422)
T ss_dssp --CTTCEEEEEESCCTTHHHHHHHT---TCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTT
T ss_pred --CCCCEEEEcCCCchhhHHHHHHc---CCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCC
Confidence 79999999999999987766554 99999998875 34689999999999999999999999999
Q ss_pred ccccc---HHHHHHHHHhcCCEEEEecccccc----cccccCCC----CCccEEEeccccccCCCC--cEEEEEecCCCC
Q psy15216 150 GVIQP---ILEIGELCRSKGVIFHCDAAQAVG----KIDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRT 216 (2602)
Q Consensus 150 G~~~~---l~~I~~la~~~g~~livD~a~a~g----~~~~dl~~----~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~ 216 (2602)
|.++| +++|+++|++||+++|+|++|+.. ..+.++.. .+.++++.|+||.+|++| +||+++++++++
T Consensus 188 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~ 267 (422)
T 3fvs_A 188 GKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMK 267 (422)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHH
T ss_pred CcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHHH
Confidence 99995 888999999999999999999752 22222221 245688999999888777 899999887766
Q ss_pred cccceecCCCccccccccCcchhHHHHHHHHHHH-------HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCC
Q psy15216 217 RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-------ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNR 289 (2602)
Q Consensus 217 ~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~-------~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~ 289 (2602)
.+..... ...++++.....++.++++. ...++++..+++.++++++.+.|.+ . ++.+..+...
T Consensus 268 ~~~~~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~- 337 (422)
T 3fvs_A 268 HLRTVHQ-------NSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQS-V-GLKPIIPQGS- 337 (422)
T ss_dssp HHHHHHH-------TTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHT-T-TCEEEBCSBS-
T ss_pred HHHHHHh-------hccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHH-c-CCeecCCCee-
Confidence 6644321 12345666777777777763 2345788899999999999999987 3 7776654332
Q ss_pred CCceEEEEEccc----C----------hhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCC
Q psy15216 290 IPHNLNISFNFI----E----------GESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR 352 (2602)
Q Consensus 290 ~~~~~~~~~~~~----~----------~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~ 352 (2602)
...++.++.. + ..++...+ +||.+.+|..|... . ......+++|||++.
T Consensus 338 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~------~------~~~~~~~~iRis~~~ 403 (422)
T 3fvs_A 338 --YFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSV------P------HQKHFDHYIRFCFVK 403 (422)
T ss_dssp --SEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCH------H------HHTTSCSEEEEECCC
T ss_pred --eEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCC------c------CCCCCCCeEEEEecC
Confidence 3334444321 1 33555543 59999999988642 0 001224899999986
Q ss_pred CCCHHHHHHHHHHHHhh
Q psy15216 353 FTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 353 ~~t~edid~li~~L~~~ 369 (2602)
++++++.++++|++.
T Consensus 404 --~~e~i~~~l~~l~~~ 418 (422)
T 3fvs_A 404 --DEATLQAMDEKLRKW 418 (422)
T ss_dssp --CHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHH
Confidence 999999999999863
No 199
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.89 E-value=2.4e-22 Score=260.72 Aligned_cols=312 Identities=14% Similarity=0.116 Sum_probs=230.6
Q ss_pred CCCHHHHHHHHHHHhhc--cCCCCCccchhHHHHHHHHHHHHHHHHHHh----CCC--CC-cEEEeCCHHHHHHHHHHhh
Q psy15216 1404 PIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLI----YAD--PR-EIIWTSGATESNNLAIKGA 1474 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~--~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g~~--~~-~iv~t~gaT~al~~al~~l 1474 (2602)
+.++.+.+++.+.++.. ..++. .....++|+++++++ |++ ++ +|++|+|+++|++.++.++
T Consensus 38 ~~~~~v~~a~~~~~~~~~~~~y~~----------~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l 107 (376)
T 2dou_A 38 PPPEAPLKALAEALNDPTTYGYCL----------KSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLAL 107 (376)
T ss_dssp CCCHHHHHHHHHHTTCGGGSSCCC----------HHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCcCCCCC----------CCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHh
Confidence 35778999998887531 11111 123567778888777 874 45 8999999999999999998
Q ss_pred hhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccC---h
Q psy15216 1475 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 1551 (2602)
Q Consensus 1475 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l 1551 (2602)
. ++||+|+++.|+|+++...+... |++++.++.+.++.+|++++++++++++++|++++|+||||.++| +
T Consensus 108 ~----~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l 180 (376)
T 2dou_A 108 T----EPEDLLLLPEVAYPSYFGAARVA---SLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYF 180 (376)
T ss_dssp C----CTTCEEEEESSCCHHHHHHHHHT---TCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHH
T ss_pred c----CCCCEEEECCCCcHhHHHHHHHc---CCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHH
Confidence 6 79999999999999987766544 999999998444568999999999888999999999999999998 6
Q ss_pred HHHHHHhhhcCCEEEEecccccCcc---c---ccC-CCCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCC
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGKI---D---INI-QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGG 1622 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~~---~---~~l-~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~ 1622 (2602)
++|.++|++||+++|+|++|+.+.. + ..+ ...+.++++.|+||.+|++| +||++.++++++.+......
T Consensus 181 ~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~-- 258 (376)
T 2dou_A 181 EEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGV-- 258 (376)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHh--
Confidence 7889999999999999999975431 1 222 11246788999999888777 79999988766665443211
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-CCcHH
Q psy15216 1623 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGES 1701 (2602)
Q Consensus 1623 ~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-~~~~~ 1701 (2602)
...+.+...+.++.++|+.....+++.++++.++++++.+.|.+ . +.+..+.. .....+.++. .+..+
T Consensus 259 -----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~--~~~~~~~~---~~~~~~~~~~~~~~~~ 327 (376)
T 2dou_A 259 -----IDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKG-V--LSLLPPRA---TMYLWGRLPEGVDDLE 327 (376)
T ss_dssp -----HCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTT-T--SEECCCCB---SSEEEEECCTTCCHHH
T ss_pred -----cccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-h--cCccCCCe---eEEEEEECCCCCCHHH
Confidence 11244566666666777643456788888999999999999987 3 45443211 2223344442 34456
Q ss_pred HHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1702 LLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1702 ~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
+...| +||.+++|..|... ..+++||+++. +.+++++++++|++
T Consensus 328 ~~~~l~~~gi~v~~g~~f~~~-----------------~~~~~Ris~~~--~~~~i~~~l~~l~~ 373 (376)
T 2dou_A 328 FGLRLVERGVALAPGRGFGPG-----------------GKGFVRIALVR--PLEELLEAAKRIRE 373 (376)
T ss_dssp HHHHHHHTTEECEEGGGGCGG-----------------GTTEEEEECCS--CHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEcCchhhCCC-----------------CCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 66665 79999998877421 13789999985 78999999999986
No 200
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.89 E-value=1.5e-22 Score=264.94 Aligned_cols=320 Identities=16% Similarity=0.159 Sum_probs=232.9
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
+++|.+.+++.+++.....+++. +...+...+..+++|+++++++|. +++|++++|++ ++..++.++.. +.+||
T Consensus 60 ~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~la~~~~~-~~~i~~~sG~~-a~~~~~~~l~~--~~~gd 133 (401)
T 2bwn_A 60 GQHPVVLAAMHEALEAVGAGSGG--TRNISGTTAYHRRLEAEIAGLHQK-EAALVFSSAYN-ANDATLSTLRV--LFPGL 133 (401)
T ss_dssp GGCHHHHHHHHHHHHHHCSCCCS--BTTTBCCBHHHHHHHHHHHHHTTC-SEEEEESCHHH-HHHHHHHHHHH--HSTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCCCC--cCcccCChHHHHHHHHHHHHHhCC-CcEEEECCcHH-HHHHHHHHHhc--CCCCC
Confidence 35778999999998765444442 222222335678999999999997 46788877766 77777665431 25899
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhcc----CCceEEEEecccCcccccccHHHHHHHHH
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC----SDTILVSVMLVNNEIGVIQPILEIGELCR 163 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~----~~tklv~i~~~~npTG~~~~l~~I~~la~ 163 (2602)
+|+++.++|+++...+.. .|++++.++.+ |+++++++++ +++++|++++++||||.++|+++|.++|+
T Consensus 134 ~Vl~~~~~~~~~~~~~~~---~g~~~~~v~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 205 (401)
T 2bwn_A 134 IIYSDSLNHASMIEGIKR---NAGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAE 205 (401)
T ss_dssp EEEEETTCCHHHHHHHHH---SCCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHH
T ss_pred EEEECchhhHHHHHHHHH---cCCeEEEEcCC-----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHH
Confidence 999999999998887755 49999999864 7888888886 68999999999999999999999999999
Q ss_pred hcCCEEEEeccccccccc-----c-cCCCC--CccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCccccccccC
Q psy15216 164 SKGVIFHCDAAQAVGKID-----I-NIQNY--KVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGT 235 (2602)
Q Consensus 164 ~~g~~livD~a~a~g~~~-----~-dl~~~--~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt 235 (2602)
+||+++|+|++|+.|... + ..... ..|+++.|++|.+|++| ||++.++++.+.+..... ...+..++
T Consensus 206 ~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G-G~~~~~~~~~~~l~~~~~----~~~~~~~~ 280 (401)
T 2bwn_A 206 EFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG-GYIAASARMVDAVRSYAP----GFIFSTSL 280 (401)
T ss_dssp HHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC-EEEEECHHHHHHHHHHCH----HHHTSBCC
T ss_pred HcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC-CEEecCHHHHHHHHHhCc----CceecCCC
Confidence 999999999999855321 0 00111 35899999999999887 999988766555432111 11223445
Q ss_pred cchhHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc-cChhHHHHHh---
Q psy15216 236 LATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI--- 310 (2602)
Q Consensus 236 ~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~L--- 310 (2602)
++ ..++++.+++++... ++++..+++.++++++.+.|.+ . ++.++.+.. .++.+.++. .+..++...|
T Consensus 281 ~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~----~~~~~~~~~~~~~~~~~~~L~~~ 353 (401)
T 2bwn_A 281 PP-AIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKA-L-GMPIIDHGS----HIVPVVIGDPVHTKAVSDMLLSD 353 (401)
T ss_dssp CH-HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-H-TCCBCCCSS----SCEEEECCCHHHHHHHHHHHHHH
T ss_pred CH-HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-C-CCcccCCCC----CeEEEEeCChHHHHHHHHHHHhc
Confidence 45 667777788886543 3578899999999999999988 4 776664321 244454442 3445566555
Q ss_pred CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 311 KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 311 ~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+||.++++..+..+ ...+++|++++.+++++|+++++++|++.
T Consensus 354 ~gi~v~~~~~~~~~----------------~~~~~iRis~~~~~t~~~i~~~~~~l~~~ 396 (401)
T 2bwn_A 354 YGVYVQPINFPTVP----------------RGTERLRFTPSPVHDLKQIDGLVHAMDLL 396 (401)
T ss_dssp HCEECCEECTTTSC----------------TTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred CCEEEeecCCCCCC----------------CCCceEEEEeeCCCCHHHHHHHHHHHHHH
Confidence 49999877543211 11268999999999999999999999864
No 201
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.89 E-value=5.3e-23 Score=261.84 Aligned_cols=299 Identities=15% Similarity=0.096 Sum_probs=207.2
Q ss_pred HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHH-HHhCCcEEEEeccCCCCc
Q psy15216 45 KARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKPKNNGL 123 (2602)
Q Consensus 45 ~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~~~~~~ 123 (2602)
++++.+++++|++ +.++ ++++++|+++++.++. ++||+|+++.++|+++...+.. ++..|++++.++.
T Consensus 2 ~l~~~la~~~g~~-~~i~-~~sG~~a~~~~~~~~~----~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----- 70 (331)
T 1pff_A 2 ALEGKIAKLEHAE-ACAA-TASGMGAIAASVWTFL----KAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM----- 70 (331)
T ss_dssp HHHHHHHHHHTCS-EEEE-ESSHHHHHHHHHHHHC----CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----
T ss_pred hHHHHHHHHhCCC-eEEE-eCChHHHHHHHHHHhc----CCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----
Confidence 5789999999986 4454 5555899999999886 7999999999999998877754 3567999999975
Q ss_pred cChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHh-cCCEEEEecccccccccccCCCCCccEEEeccccccCC
Q psy15216 124 ITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS-KGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGP 202 (2602)
Q Consensus 124 ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~-~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp 202 (2602)
.|++++++++++++++|++++++||||.+.|+++|.++|++ +|+++|+|++|+.+....++ .+++|++++|+||++|.
T Consensus 71 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~d~~~~s~~K~~~~ 149 (331)
T 1pff_A 71 AVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL-DLGVDIVVHSATKYING 149 (331)
T ss_dssp TSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG-GGTCSEEEEETTTTTSS
T ss_pred CCHHHHHHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh-hcCCcEEEEECccccCC
Confidence 48999999999999999999999999999999999999999 99999999999987654344 46789999999997664
Q ss_pred -CC--cEEEEEec-CCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH------
Q psy15216 203 -KG--IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNG------ 272 (2602)
Q Consensus 203 -~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~------ 272 (2602)
.+ +|++++++ ++++.+.+...++ ..++++....+++..+++......+...+....+.+++.+.
T Consensus 150 ~~~r~~G~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 223 (331)
T 1pff_A 150 HTDVVAGLVCSRADIIAKVKSQGIKDI------TGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKV 223 (331)
T ss_dssp SSSCCCEEEEECHHHHHHHHHTCCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCE
T ss_pred CCCceEEEEEeCcHHHHHHHHHHHHhh------cCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 44 79999998 7777776654331 12345555555444555533323333333333333333322
Q ss_pred ----HhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEccc---------ccCCCCC--CChHHHHHHc
Q psy15216 273 ----LMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSG---------SACTSAS--LEPSYVLRAL 335 (2602)
Q Consensus 273 ----L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g---------~~~~~~~--~~~~~~~~~~ 335 (2602)
|.+ .|++.++.+.....+.++.+.++ +...+...| .||.++.. .+|..+. ..++..+..+
T Consensus 224 ~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~ 300 (331)
T 1pff_A 224 YYPGLPD-HPGHEIAKKQMKMFGSMIAFDVD--GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAA 300 (331)
T ss_dssp ECTTSTT-STTHHHHHHHCSSCCSEEEEECS--SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHT
T ss_pred ECCCCCC-CccHHHHHhhCCCCceEEEEEEC--CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhc
Confidence 111 12222222111112334444443 555555555 68877654 2333211 1233444566
Q ss_pred CCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 336 GCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 336 g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
|++ ++++|+|++.+++++++++++++|++
T Consensus 301 g~~----~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 301 GLT----DNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp TCC----TTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCC----CCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 664 38999999999999999999999985
No 202
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.89 E-value=7e-22 Score=265.83 Aligned_cols=313 Identities=18% Similarity=0.227 Sum_probs=221.0
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHhccccc----ccCC-----C-EEEEcCCCCcccH
Q psy15216 33 HIYGWTAEKAIEKARNEVAQLIYAD--PREIIWTSGATESNNLAIKGAAHFY----KKRG-----K-HIITVQTEHKSVL 100 (2602)
Q Consensus 33 ~~~~~~~~~~~~~~r~~lA~~~g~~--~~~Iv~t~g~T~al~~~~~~l~~~~----~~~g-----d-~Vlv~~~~~~s~~ 100 (2602)
+..+.....+.+++++++++++|++ ++++++++|+|+|+..++.++.... ..+| + +|+++.++|+++.
T Consensus 124 ~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~ 203 (504)
T 2okj_A 124 YEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK 203 (504)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH
T ss_pred hhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHH
Confidence 4444455566778889999999997 6789999999999999999885211 0245 6 8999999999999
Q ss_pred HHHHHHHhCCc-EEEEeccCCCCccChHHHHhhccC------CceEEEEecccCcccccccHHHHHHHHHhcCCEEEEec
Q psy15216 101 DSIRKLENDGF-RVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDA 173 (2602)
Q Consensus 101 ~~~~~~~~~G~-~v~~v~~~~~~~ld~e~l~~~i~~------~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~ 173 (2602)
.++..+.. |. +++.+++++++.+|+++|+++|++ +|++|++++++|+||.+.|+++|+++|++||+++|+|+
T Consensus 204 ~~~~~~g~-g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~ 282 (504)
T 2okj_A 204 KAGAALGF-GTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDA 282 (504)
T ss_dssp HHHHHTTS-CGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHcCC-CcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEeh
Confidence 88887622 33 899999988899999999999975 58999999999999999999999999999999999999
Q ss_pred cccccccc-----ccCCCC-CccEEEeccccccC-CCCcEEEEEecC-CCCc----ccceecCCCcccc--c-------c
Q psy15216 174 AQAVGKID-----INIQNY-KVDLMSFSAHKIYG-PKGIGALYIRRN-PRTR----IEAQIHGGGHEYG--L-------R 232 (2602)
Q Consensus 174 a~a~g~~~-----~dl~~~-~~D~~~~S~~K~~G-p~G~G~l~~~~~-~~~~----l~~~~~g~~~~~~--~-------~ 232 (2602)
+|+.+... ..+... ++|++++|+||++| |.|+|+++++++ +... ..++..++..... + .
T Consensus 283 a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 362 (504)
T 2okj_A 283 AWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQ 362 (504)
T ss_dssp TTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSC
T ss_pred hhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCC
Confidence 99877653 233332 68999999999765 888999999874 3321 2223322211000 0 0
Q ss_pred cc-CcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccC---------
Q psy15216 233 SG-TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE--------- 302 (2602)
Q Consensus 233 ~g-t~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~--------- 302 (2602)
.+ ......++++..++ ...++.+..++..++++++.+.|.+ .++++++.+.... ...+.|.+....
T Consensus 363 ~~rr~~~l~~~a~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~p~-~~~v~f~~~~~~~~~~~~~~~ 438 (504)
T 2okj_A 363 CGRHVDIFKFWLMWKAK--GTVGFENQINKCLELAEYLYAKIKN-REEFEMVFNGEPE-HTNVCFWYIPQSLRGVPDSPQ 438 (504)
T ss_dssp SSCBCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTT-CTTEEESSSSCCS-SSCEEEEECCGGGSSCCCCHH
T ss_pred CCCCccHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEecCCCC-eEEEEEEEeCccccccccchh
Confidence 00 01222333332333 3467888999999999999999987 7899998631111 223444432110
Q ss_pred --------hhHHHHHh--CCe-EEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecC-CCCCHHHHHHHHHHHHhh
Q psy15216 303 --------GESLLMAI--KDI-AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 303 --------~~~~~~~L--~gI-~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~-~~~t~edid~li~~L~~~ 369 (2602)
...+.+.| +|+ .+.+.. +.. ..+++|++++ +++|++||++++++|++.
T Consensus 439 ~~~~~~~~~~~l~~~L~~~G~~~~~~~~-~~~------------------~~~~lRis~~~~~~t~edi~~~~~~l~~~ 498 (504)
T 2okj_A 439 RREKLHKVAPKIKALMMESGTTMVGYQP-QGD------------------KANFFRMVISNPAATQSDIDFLIEEIERL 498 (504)
T ss_dssp HHHHHTTHHHHHHHHHHHHTSCEEEEEE-ETT------------------EEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCcEEEEeeE-ECC------------------ceEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 12344444 453 333211 100 0158999996 899999999999999864
No 203
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.89 E-value=5.2e-22 Score=264.50 Aligned_cols=354 Identities=14% Similarity=0.133 Sum_probs=246.7
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCC
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~g 86 (2602)
+...|.+.+++.+.+.. .+|.. ....+....+..+++++++++++|++. .+++++|+++|+..++.++.....++|
T Consensus 76 ~~~~p~v~~~~~~~~~~--~~~~~-~~~~~~g~~~l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~~~~~~~~~~G 151 (474)
T 1wyu_B 76 MKYNPKLHEEAARLFAD--LHPYQ-DPRTAQGALRLMWELGEYLKALTGMDA-ITLEPAAGAHGELTGILIIRAYHEDRG 151 (474)
T ss_dssp CCCCCHHHHHHHHTTSS--CCTTS-CGGGCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHHHh--cCCCC-chhhChHHHHHHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHHHHHHHHHhcC
Confidence 34456777777665221 23322 111355567789999999999999874 477889999999987766532223578
Q ss_pred C-----EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCccccc-ccHHHHHH
Q psy15216 87 K-----HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVI-QPILEIGE 160 (2602)
Q Consensus 87 d-----~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~-~~l~~I~~ 160 (2602)
| +|+++.+.|+++...+... |++++.+++++++.+|+++|+++++++|++|++++| ||||.+ .|+++|++
T Consensus 152 d~~~r~~Vlv~~~~h~~~~~~~~~~---G~~vv~v~~~~~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~l~~i~~ 227 (474)
T 1wyu_B 152 EGRTRRVVLVPDSAHGSNPATASMA---GYQVREIPSGPEGEVDLEALKRELGPHVAALMLTNP-NTLGLFERRILEISR 227 (474)
T ss_dssp CTTTCCEEEEETTSCTHHHHHHHHT---TCEEEEECBCTTSSBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTTHHHHHH
T ss_pred CccCCCEEEEeCCcChhhHHHHHHC---CCEEEEecCCCCCCcCHHHHHHhhCCCceEEEEECC-CCCcccCCCHHHHHH
Confidence 7 9999999999998776554 999999999888999999999999999999999998 689998 69999999
Q ss_pred HHHhcCCEEEEecccccccc-cccCCCCCccEEEeccccccC-CC-----CcEEEEEecCCCCccc-ceec-CCC-----
Q psy15216 161 LCRSKGVIFHCDAAQAVGKI-DINIQNYKVDLMSFSAHKIYG-PK-----GIGALYIRRNPRTRIE-AQIH-GGG----- 226 (2602)
Q Consensus 161 la~~~g~~livD~a~a~g~~-~~dl~~~~~D~~~~S~~K~~G-p~-----G~G~l~~~~~~~~~l~-~~~~-g~~----- 226 (2602)
+|++||+++|+|++|+.+.. ..+...+++|++++|+||+++ |. |+|++++++++++.+. +... ++.
T Consensus 228 l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~ 307 (474)
T 1wyu_B 228 LCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLD 307 (474)
T ss_dssp HHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEE
T ss_pred HHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEec
Confidence 99999999999999976654 233334578999999999654 42 5899999998877765 2221 110
Q ss_pred --cc---ccccccCcchhHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc-
Q psy15216 227 --HE---YGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN- 299 (2602)
Q Consensus 227 --~~---~~~~~gt~~~~~~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~- 299 (2602)
.+ .++..++.+...+.++..++. +..+++++..++..++++++.+.|.+ . |+++..+... .+.+.+.++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~--~~~~~~~~~~ 383 (474)
T 1wyu_B 308 FDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKE-K-GYRVPYDGPS--MHEFVAQPPE 383 (474)
T ss_dssp CCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCBCSSCSSC--CSCEEEBCST
T ss_pred ccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c-CcEecCCCCc--ceEEEEEcCC
Confidence 00 122334455554544445554 23456778889999999999999988 4 7766322211 122333332
Q ss_pred ccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhhhhhhhhhH
Q psy15216 300 FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKEFFMSYSE 377 (2602)
Q Consensus 300 ~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~~~~~~y~~ 377 (2602)
..+..++...| +||.+ ++..+.. ...+++||+++.+++.+|+++++++|++.... .+
T Consensus 384 ~~~~~~l~~~L~~~Gi~~-~~~~~~~-----------------~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~---~~ 442 (474)
T 1wyu_B 384 GFRALDLAKGLLELGFHP-PTVYFPL-----------------IVKEALMVEPTETEAKETLEAFAEAMGALLKK---PK 442 (474)
T ss_dssp TCCHHHHHHHHHHTTCCC-CEESCST-----------------TSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS---CH
T ss_pred CCCHHHHHHHHHHCCccc-ccccccc-----------------ccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh---Cc
Confidence 24566777776 67764 2222210 11378999999999999999999999974322 44
Q ss_pred hhhhcccCCCCCCCCC
Q psy15216 378 KVLDHYENPRNVGVFE 393 (2602)
Q Consensus 378 ~~~~hy~~p~n~g~~~ 393 (2602)
..+......--++.++
T Consensus 443 ~~l~~~p~~~~~~~~~ 458 (474)
T 1wyu_B 443 EWLENAPYSTPVRRLD 458 (474)
T ss_dssp HHHHTCCCSSSSCSBC
T ss_pred hhhhcCCCCCCcCccc
Confidence 5555544444456664
No 204
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.89 E-value=3.9e-22 Score=268.64 Aligned_cols=323 Identities=18% Similarity=0.216 Sum_probs=223.8
Q ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhh----ccCCC------EEEEcCCCC
Q psy15216 1423 NPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY----KKRGK------HIITVQTEH 1492 (2602)
Q Consensus 1423 np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~----~~~gd------~Vlv~~~~~ 1492 (2602)
|++...|..++...++..++++++++++|+++++++||+|+|+|+..++.++.... ..+|+ +|+++.++|
T Consensus 134 n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h 213 (515)
T 2jis_A 134 NTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECH 213 (515)
T ss_dssp CCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSC
T ss_pred ccCCCchhhchHHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCcc
Confidence 55544455566777888999999999999988889999999999999988874211 12565 899999999
Q ss_pred cchHHHHHHHHhCCc---EEEEeccCCCCCcChhHHHhhccC------CceEEEEeccccccccccChHHHHHHhhhcCC
Q psy15216 1493 KSVLDSIRKLENDGF---RVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGELCRSKGV 1563 (2602)
Q Consensus 1493 ~s~~~~~~~~~~~G~---~v~~v~~~~~~~id~d~l~~~i~~------~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi 1563 (2602)
+++..++..+ |. +++.++.++++.+|+++|+++|++ +|++|++++++|+||.+.|+++|+++|++||+
T Consensus 214 ~s~~~~~~~~---g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~ 290 (515)
T 2jis_A 214 YSIQKGAAFL---GLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGL 290 (515)
T ss_dssp THHHHHHHHT---TSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHc---CCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCC
Confidence 9998887776 55 899999988899999999999975 48999999999999999999999999999999
Q ss_pred EEEEecccccCccccc-----CCCC-CccEEEEcccccc-CCCceEEEEEecC--CCCc----cccccccCCc--cccCC
Q psy15216 1564 IFHCDAAQAVGKIDIN-----IQNY-KVDLMSFSAHKIY-GPKGIGALYIRRN--PRTR----IEAQIHGGGH--EYGLR 1628 (2602)
Q Consensus 1564 ~vivD~a~~~g~~~~~-----l~~~-~~D~~v~S~~K~~-gp~G~G~l~~~~~--~~~~----l~~~~~g~~~--~~~~~ 1628 (2602)
|+|+|++|+.+..+.+ +..+ ++|++++|+||++ +|.|+|+++++++ ++.. ..+.+.++.. ...+.
T Consensus 291 ~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 370 (515)
T 2jis_A 291 WLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALD 370 (515)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGC
T ss_pred eEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCC
Confidence 9999999998877654 4444 7899999999965 5889999999976 3332 1222222211 00111
Q ss_pred CCCcch-----hHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEE-ec-C---
Q psy15216 1629 SGTLAT-----HQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF-NF-I--- 1697 (2602)
Q Consensus 1629 ~gt~~~-----~~~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~-~~-~--- 1697 (2602)
.++.++ ....++..++. +...+++++.++..++++++.+.|.+ .+++.+..++. .....|.+ +. .
T Consensus 371 ~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~~~~~~---~~~v~f~~~p~~~~~~ 446 (515)
T 2jis_A 371 TGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKK-REGFELVMEPE---FVNVCFWFVPPSLRGK 446 (515)
T ss_dssp CGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTEEESSCCS---SSEEEEEECCGGGTTC
T ss_pred CCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCC---eeEEEEEEeCcccccc
Confidence 111110 01122333344 33567888999999999999999988 78999986532 12333433 21 0
Q ss_pred -CcHHHHHh-------cCCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEec-CCCCCHHHHHHHHHHHHH
Q psy15216 1698 -EGESLLMA-------IKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1698 -~~~~~~~~-------L~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~-~~~~t~edid~li~~L~~ 1764 (2602)
+..++... +.+.....|..+.... .. ....+++|+++ ++++|.+||++++++|++
T Consensus 447 ~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~--------~~----~~~~~~lRis~~~~~~t~edid~~~~~l~~ 510 (515)
T 2jis_A 447 QESPDYHERLSKVAPVLKERMVKEGSMMIGYQ--------PH----GTRGNFFRVVVANSALTCADMDFLLNELER 510 (515)
T ss_dssp TTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEE--------EE----TTEEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCEEEEEE--------EE----CCceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 11111110 1111112222221000 00 00126899999 799999999999999986
No 205
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.89 E-value=6.1e-23 Score=270.66 Aligned_cols=316 Identities=12% Similarity=0.072 Sum_probs=233.8
Q ss_pred CCHHHHHHHHHHHhhh----cCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C---CCCCcEEEeCCHHHHHHHHHHh
Q psy15216 9 IDPRVVDKMIPYLRVQ----FGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y---ADPREIIWTSGATESNNLAIKG 77 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~----~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g---~~~~~Iv~t~g~T~al~~~~~~ 77 (2602)
+++.+.+++.+.+... ..++.. ....++|+.+++++ | +++++|++|+|+++|+++++.+
T Consensus 59 ~~~~v~~a~~~~~~~~~~~~~~y~~~----------~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~ 128 (425)
T 1vp4_A 59 PRKELAEIAKEIIEKEYHYTLQYSTT----------EGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKL 128 (425)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTSCCCT----------TCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcchhhcCCCCC----------CCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHH
Confidence 5678889988887641 222221 12345667777766 8 6678999999999999999999
Q ss_pred cccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC--------CceEE-EEecccCc
Q psy15216 78 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS--------DTILV-SVMLVNNE 148 (2602)
Q Consensus 78 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~--------~tklv-~i~~~~np 148 (2602)
+. ++||+|+++.|.|+++...+.. .|++++.++.++++ +|+++|++++++ ++++| ++++++||
T Consensus 129 l~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~np 200 (425)
T 1vp4_A 129 FL----DDESYCVLDDPAYLGAINAFRQ---YLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNP 200 (425)
T ss_dssp HC----CTTCEEEEEESCCHHHHHHHHT---TTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTT
T ss_pred hC----CCCCEEEEeCCCcHHHHHHHHH---cCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCC
Confidence 87 7999999999999997766554 49999999987654 899999999876 78988 58999999
Q ss_pred cccccc---HHHHHHHHHhcCCEEEEecccccccc----cccC---CCCCccEEEeccccccCCCC--cEEEEEecCCCC
Q psy15216 149 IGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI----DINI---QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRT 216 (2602)
Q Consensus 149 TG~~~~---l~~I~~la~~~g~~livD~a~a~g~~----~~dl---~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~ 216 (2602)
||.++| +++|+++|++||+++|+|++|+.... +..+ ...+.++++.|+||++| +| +||+++++++++
T Consensus 201 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~ 279 (425)
T 1vp4_A 201 AGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKEFIR 279 (425)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCHHHHH
Confidence 999998 56788999999999999999976321 1222 12245788999999888 77 699999987766
Q ss_pred cccceecCCCccccccccCcchhHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhhccC---ceEEeCCCCCCCC
Q psy15216 217 RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRILFLQKRLYNGLMESIE---EIYINGDMNNRIP 291 (2602)
Q Consensus 217 ~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~--~~~~~~~~~~~~~l~~~l~~~L~~~~~---g~~l~~~~~~~~~ 291 (2602)
.+.+... ...++++.+...++.++|+.. ..++++..+++.++++++.+.|.+..| ++.+..+.. .
T Consensus 280 ~l~~~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~---g 349 (425)
T 1vp4_A 280 KIVQAKQ-------SADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEG---G 349 (425)
T ss_dssp HHHHHHH-------HHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSB---S
T ss_pred HHHHHhh-------hhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCc---c
Confidence 6654321 112345666777777777742 455778888889999999999977434 677764432 2
Q ss_pred ceEEEEEcc-cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 292 HNLNISFNF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 292 ~~~~~~~~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
.++.+.++. .+..++...| +||.+++|..|.+. ....+++||+++.. +++++++++++|++
T Consensus 350 ~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~---------------~~~~~~iRis~~~~-~~e~i~~~l~~l~~ 413 (425)
T 1vp4_A 350 LFIWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKVY---------------DEPSPSMRLSFCLP-PDEKIVEGIKRLRE 413 (425)
T ss_dssp SEEEEECCTTCCTTTTHHHHHHHTEECEEGGGGCTT---------------CCCCSEEEEECSSS-CHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCHHHHHHHHHHCCCEEECchhhcCC---------------CCCCCeEEEEeCCC-CHHHHHHHHHHHHH
Confidence 344455542 3455666666 69999998877532 01237899999874 89999999999996
Q ss_pred h
Q psy15216 369 K 369 (2602)
Q Consensus 369 ~ 369 (2602)
.
T Consensus 414 ~ 414 (425)
T 1vp4_A 414 V 414 (425)
T ss_dssp H
T ss_pred H
Confidence 4
No 206
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.89 E-value=2.6e-22 Score=261.53 Aligned_cols=331 Identities=13% Similarity=0.144 Sum_probs=236.1
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccc---c
Q psy15216 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF---Y 82 (2602)
Q Consensus 6 ~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~---~ 82 (2602)
..+.++.+++++.+.+...+..+ .+..+++|+.+++++|.+ ++++++|+|+|+++++.++... .
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~~-----------~~~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~al~~~~~~~~~~ 76 (390)
T 3b8x_A 10 SSTWDDLEYKAIQSVLDSKMFTM-----------GEYVKQYETQFAKTFGSK--YAVMVSSGSTANLLMIAALFFTKKPR 76 (390)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSS-----------CHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTSSSSCS
T ss_pred CCCCCHHHHHHHHHHHHcCCCCC-----------ChHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHHhhhhcC
Confidence 34678899999999887532111 235788999999999986 6888999999999999998100 0
Q ss_pred ccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC-CccChHHHHhhccCCceEEEEecccCcccccccHHHHHHH
Q psy15216 83 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGEL 161 (2602)
Q Consensus 83 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~l 161 (2602)
+++||+|+++.++|+++...+... |++++.++++++ +.+|+++|+++++++|++|+++| ++|...|+++|.++
T Consensus 77 ~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l 150 (390)
T 3b8x_A 77 LKKGDEIIVPAVSWSTTYYPLQQY---GLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPNNFDEINKI 150 (390)
T ss_dssp CCTTCEEEEESSSCHHHHHHHHHT---TCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHH
T ss_pred CCCcCEEEECCCCcHHHHHHHHHc---CCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEEC---CccChhhHHHHHHH
Confidence 378999999999999998877654 999999999875 88999999999999999999985 58888999999999
Q ss_pred HHhcCCEEEEecccccccccccCCCCCc--cEEEecc---ccccCCCCcEEEEEec-CCCCcccceecCC--Cc------
Q psy15216 162 CRSKGVIFHCDAAQAVGKIDINIQNYKV--DLMSFSA---HKIYGPKGIGALYIRR-NPRTRIEAQIHGG--GH------ 227 (2602)
Q Consensus 162 a~~~g~~livD~a~a~g~~~~dl~~~~~--D~~~~S~---~K~~Gp~G~G~l~~~~-~~~~~l~~~~~g~--~~------ 227 (2602)
|++||+++|+|++|+.|..+ +...++. |+.++|+ +|+.++.| |+++.++ ++.+.+.+...++ ..
T Consensus 151 ~~~~~~~li~D~a~~~g~~~-~~~~~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~ 228 (390)
T 3b8x_A 151 IGGRDIILLEDNCESMGATF-NNKCAGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNK 228 (390)
T ss_dssp HTTSCCEEEEECTTCTTCEE-TTEETTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEET
T ss_pred HHHcCCEEEEECcCcccCEE-CCcccccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhcCCCcccccccc
Confidence 99999999999999988765 4444443 5655543 44655666 9999876 4444454433222 00
Q ss_pred ------------c-----ccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCC
Q psy15216 228 ------------E-----YGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRI 290 (2602)
Q Consensus 228 ------------~-----~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~ 290 (2602)
. .++..+++++.+.+++. ++ +.+++..++.+++++++.+.|.+ ++++++..++....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~-~l----~~l~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~ 302 (390)
T 3b8x_A 229 VTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIE-QL----KKLPRFISVRRKNAEYFLDKFKD-HPYLDVQQETGESS 302 (390)
T ss_dssp TTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHHHTT-CSSEEECCCCSBCC
T ss_pred ccccccccccccccceeccccccCcCHHHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHHhcC-CCCcccCCCCCCcc
Confidence 0 01122245555554443 23 34567888999999999999987 78988875432222
Q ss_pred CceEEEEEc---ccChhHHHHHh--CCeEEcc---cccCCC-CCCChHHH------HHHcCCCccCCCCeEEEecCCCCC
Q psy15216 291 PHNLNISFN---FIEGESLLMAI--KDIAVSS---GSACTS-ASLEPSYV------LRALGCNDELAHSSIRFTIGRFTT 355 (2602)
Q Consensus 291 ~~~~~~~~~---~~~~~~~~~~L--~gI~v~~---g~~~~~-~~~~~~~~------~~~~g~~~~~~~~~iRis~~~~~t 355 (2602)
+..+.+.++ +.+..++...| +||.+++ +..|.. + .+. ...++..++...+.||++++.++|
T Consensus 303 ~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t 378 (390)
T 3b8x_A 303 WFGFSFIIKKDSGVIRKQLVENLNSAGIECRPIVTGNFLKNTD----VLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIEL 378 (390)
T ss_dssp CCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHH----HHTTCEEEESSCCHHHHHHHHHEEEEECCSSCC
T ss_pred cEEEEEEecCcCcccHHHHHHHHHHCCCCeeeecCCchhhcch----hhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCC
Confidence 334455565 34667777777 7999886 333432 2 110 111222333344689999999999
Q ss_pred HHHHHHHHHHHH
Q psy15216 356 EKEIDFTIKLLK 367 (2602)
Q Consensus 356 ~edid~li~~L~ 367 (2602)
++|+++++++|+
T Consensus 379 ~~di~~i~~~l~ 390 (390)
T 3b8x_A 379 FDEIDYLREVLK 390 (390)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHhhC
Confidence 999999999874
No 207
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.89 E-value=6.3e-23 Score=271.93 Aligned_cols=331 Identities=15% Similarity=0.086 Sum_probs=232.4
Q ss_pred eeeccC-CCCCCCHHHHHHHHHHHhhccCCCCC---------ccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHH
Q psy15216 1395 NIVFKD-ATTPIDPRVVDKMIPYLRVQFGNPAS---------RNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGAT 1464 (2602)
Q Consensus 1395 ~v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~---------~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT 1464 (2602)
.+|+|+ ++++.+..+.+++....-..+.++.. ..+..+.......+++++++++++|++++ ++||+|+|
T Consensus 81 ~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~~~t~g~t 159 (456)
T 2z67_A 81 DKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVH-AIATPIST 159 (456)
T ss_dssp GGCTTCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCCE-EEEESSCH
T ss_pred cccccccccccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCCC-EEEeCcHH
Confidence 467764 55688888888877643221222211 01122334667888999999999999876 99999999
Q ss_pred H-HHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEecc---CCCCCcChhHHHhhc-c----CCceE
Q psy15216 1465 E-SNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP---KNNGLITLSQLEEKI-C----SDTIL 1535 (2602)
Q Consensus 1465 ~-al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~---~~~~~id~d~l~~~i-~----~~t~l 1535 (2602)
+ ++..++.++.. +.+|++|++++++|+++...+.. .|++++.++. +.++.+|+++|+++| + +++.+
T Consensus 160 e~a~~~al~~~~~--~~~~~~vi~~~~~h~s~~~~~~~---~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 234 (456)
T 2z67_A 160 GMSISLCLSAARK--KYGSNVVIYPYASHKSPIKAVSF---VGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPC 234 (456)
T ss_dssp HHHHHHHHHHHHH--HHCCCEEEEECCCCHHHHHHHHH---TTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHH--hcCCCEEEEECCCcHHHHHHHHH---cCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEE
Confidence 4 55556666541 12778899999999997665554 4999999986 567889999999999 5 47788
Q ss_pred EEEeccccccccccChHHHHHHhhhcCCEEEEecccc---cCcccccCCCC--CccEEEEcccc-ccCCCceEEEEEe-c
Q psy15216 1536 VSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA---VGKIDINIQNY--KVDLMSFSAHK-IYGPKGIGALYIR-R 1608 (2602)
Q Consensus 1536 v~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~---~g~~~~~l~~~--~~D~~v~S~~K-~~gp~G~G~l~~~-~ 1608 (2602)
|++++++|+||.+.|+++|.++|++||+++++|+||+ .|..+.+...+ ++|++++|+|| +++|.|+|+++++ +
T Consensus 235 vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~~~ 314 (456)
T 2z67_A 235 VLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDA 314 (456)
T ss_dssp EEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEESCH
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEEcCH
Confidence 8899999999999999999999999999999998765 33434443223 78999999999 5789999999995 4
Q ss_pred CCCCccccccccCCccccCCCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCC---cEEEeCCCCC
Q psy15216 1609 NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIE---EIYINGDMNN 1684 (2602)
Q Consensus 1609 ~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~---gl~i~~~~~~ 1684 (2602)
++++.+.+.+.|+ ..+ ....++.+++. +...+++++.++..++++++++.|.+ .+ |+.+..+.
T Consensus 315 ~~~~~l~~~~~g~------~~~----~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~g~~v~~~~-- 381 (456)
T 2z67_A 315 EFIKEISLSYPGR------ASA----TPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLND-LSKKTGGKFLDVE-- 381 (456)
T ss_dssp HHHHHHHTTSCSC------BCS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHSSCCBCCCC--
T ss_pred HHHhhcCcCCCCC------CCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccCCEecCCC--
Confidence 5555555544332 111 12444445555 33467889999999999999999987 44 65555432
Q ss_pred CCCceEEEEEecCC-cHHHHHhc--CCE---EEc------cccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCH
Q psy15216 1685 RIPHNLNISFNFIE-GESLLMAI--KDI---AVS------SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTE 1752 (2602)
Q Consensus 1685 ~~~~~~~~~~~~~~-~~~~~~~L--~gI---~v~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~ 1752 (2602)
+...+.+...+ ..++...| ++| .+. .|.+|... ..+++|+|++.++|.
T Consensus 382 ---~~v~~~~~~~~~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~-----------------~~~~vr~s~~~~~t~ 441 (456)
T 2z67_A 382 ---SPIASCISVNSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTY-----------------THDYIVMNAAIGVRT 441 (456)
T ss_dssp ---CSSEEEEECSSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCC-----------------SCCEEEEECCTTCCH
T ss_pred ---CeEEEEEecccHHHHHHHHHHHcCCCcceEEeecCcccccccccc-----------------CcchhhhhhhcCCCH
Confidence 22234442122 24566555 554 232 12222211 137899999999999
Q ss_pred HHHHHHHHHHHH
Q psy15216 1753 KEIDFTIKLLKM 1764 (2602)
Q Consensus 1753 edid~li~~L~~ 1764 (2602)
+|+++++++|++
T Consensus 442 eeid~~l~~L~~ 453 (456)
T 2z67_A 442 EDIVNSVSKLEK 453 (456)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 999999999986
No 208
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.89 E-value=1.5e-22 Score=262.72 Aligned_cols=313 Identities=12% Similarity=0.094 Sum_probs=233.9
Q ss_pred CCCCHHHHHHHHHHHhh-ccCCCCCccchhHHHHHHHHHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~-~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g------~~~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
.+.++.+.+++.+.+.. ...++.. . .++|+.++++++ +++++|++|+|+|+|++.++.++.
T Consensus 35 ~~~~~~v~~a~~~~~~~~~~~y~~~-----------~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~ 102 (377)
T 3fdb_A 35 FSTCPAVLQAITDAVQREAFGYQPD-----------G-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFT 102 (377)
T ss_dssp SCCCHHHHHHHHHHHHTTCCSSCCS-----------S-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHcCCCCCCCC-----------C-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhc
Confidence 46788999999998875 2222221 1 345666777665 678899999999999999999987
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccC---hH
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 1552 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l~ 1552 (2602)
++||+|+++.++|+++...+... |++++.++.+++ +|+++|+++++++++++++++|+||||.++| ++
T Consensus 103 ----~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~--~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~ 173 (377)
T 3fdb_A 103 ----PAQSKVIVPTPAYPPFFHLLSAT---QREGIFIDATGG--INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLN 173 (377)
T ss_dssp ----CTTCCEEEEESCCTHHHHHHHHH---TCCEEEEECTTS--CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHH
T ss_pred ----CCCCEEEEcCCCcHhHHHHHHHc---CCEEEEccCCCC--CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 89999999999999988777666 999999998876 9999999999999999999999999999997 66
Q ss_pred HHHHHhhhcCCEEEEecccccCc-----ccccCCC---CCccEEEEccccccCCCc--eEEEEE-ecCCCCccccccccC
Q psy15216 1553 EIGELCRSKGVIFHCDAAQAVGK-----IDINIQN---YKVDLMSFSAHKIYGPKG--IGALYI-RRNPRTRIEAQIHGG 1621 (2602)
Q Consensus 1553 ~I~~ia~~~gi~vivD~a~~~g~-----~~~~l~~---~~~D~~v~S~~K~~gp~G--~G~l~~-~~~~~~~l~~~~~g~ 1621 (2602)
+|.++|++||+++|+|++|+... .+.++.. .+.++++.|+||.+|++| +||+++ ++++++.+....
T Consensus 174 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~--- 250 (377)
T 3fdb_A 174 ELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLS--- 250 (377)
T ss_dssp HHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSC---
T ss_pred HHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHH---
Confidence 77777999999999999997622 2223322 234588999999888777 798887 444444443221
Q ss_pred CccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecC-CcH
Q psy15216 1622 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-EGE 1700 (2602)
Q Consensus 1622 ~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~-~~~ 1700 (2602)
....++++...+.++.++++.....+++.++++.++++++.+.|.+.+|++.+..+... ....+.++.. ...
T Consensus 251 ----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 323 (377)
T 3fdb_A 251 ----PVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQAT---YLMWIDFRDTTIEG 323 (377)
T ss_dssp ----HHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBC---SEEEEECTTSCCCS
T ss_pred ----HhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCee---EEEEEECcccCCCH
Confidence 11124667777777777777545567888999999999999999875678887654322 2223444431 123
Q ss_pred HHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1701 SLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1701 ~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
++...| +||.+++|..|... ..+++|+|++ ++.+++++++++|++.
T Consensus 324 ~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~~Ris~~--~~~e~i~~~l~~l~~~ 372 (377)
T 3fdb_A 324 SPSEFFIEKAKVAMNDGAWFGED-----------------GTGFCRLNFA--TSREVLEEAIDRMAKA 372 (377)
T ss_dssp CHHHHHHHHHCEECEEGGGGCGG-----------------GTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEecCChhccCC-----------------CCCEEEEEeC--CCHHHHHHHHHHHHHH
Confidence 444443 49999999887642 1389999998 4899999999999873
No 209
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.89 E-value=7.5e-22 Score=255.19 Aligned_cols=310 Identities=13% Similarity=0.082 Sum_probs=233.3
Q ss_pred eeccCC--CCCCCHHHHHHHHHHHhhc----cCCCCCccchhHHHHHHHHHHHHHHHHHH------hCCCCCcEEEeCCH
Q psy15216 1396 IVFKDA--TTPIDPRVVDKMIPYLRVQ----FGNPASRNHIYGWTAEKAIEKARNEVAQL------IYADPREIIWTSGA 1463 (2602)
Q Consensus 1396 v~L~~~--~~~~~~~v~eal~~~l~~~----~~np~~~~~~~~~~~~~~~~~lr~~ia~~------~g~~~~~iv~t~ga 1463 (2602)
+.++.+ ..+.++.+.+++.+.++.. ..++.. . ..++|+.++++ +++++++|++|+|+
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~----------~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~ 101 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPER----------D-AVELRDELAAYITKQTGVAVTRDNLWAANGS 101 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCT----------T-CHHHHHHHHHHHHHHHCCCCCGGGEEEESHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCc----------c-HHHHHHHHHHhhhhcccCCCChHhEEECCCh
Confidence 455432 2457889999999988652 222221 0 13567777777 45577899999999
Q ss_pred HHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEeccc
Q psy15216 1464 TESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVN 1542 (2602)
Q Consensus 1464 T~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~ 1542 (2602)
+++++.++.++. ++||+|++++++|+++...+... |++++.++.+.++.+|++++++++++ ++++|++++|+
T Consensus 102 ~~al~~~~~~l~----~~gd~Vl~~~~~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 174 (369)
T 3cq5_A 102 NEILQQLLQAFG----GPGRTALGFQPSYSMHPILAKGT---HTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPN 174 (369)
T ss_dssp HHHHHHHHHHHC----STTCEEEEEESSCTHHHHHHHHT---TCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSC
T ss_pred HHHHHHHHHHhc----CCCCEEEEcCCChHHHHHHHHHc---CCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCC
Confidence 999999999986 79999999999999987765544 99999999887778999999999987 89999999999
Q ss_pred cccccccChHHHHHHhhhcCCEEEEecccccCccc---ccC-CCCC-ccEEEEccccccCCCc--eEEEEEecCCCCccc
Q psy15216 1543 NEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKID---INI-QNYK-VDLMSFSAHKIYGPKG--IGALYIRRNPRTRIE 1615 (2602)
Q Consensus 1543 n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~---~~l-~~~~-~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~ 1615 (2602)
||||.++|+++|.++++.+++++|+|++|+.+... ..+ ...+ .++++.|+||.+|++| +||+++++++++.+.
T Consensus 175 nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~ 254 (369)
T 3cq5_A 175 NPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVM 254 (369)
T ss_dssp TTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHH
Confidence 99999999999999999999999999999865532 222 2344 6689999999888777 799999876655544
Q ss_pred cccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe
Q psy15216 1616 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN 1695 (2602)
Q Consensus 1616 ~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~ 1695 (2602)
... ...+++...+.++.++++. ...+++.++++.++++++.+.|.+ +++.+..+ . .....+.++
T Consensus 255 ~~~---------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~-~---~~~~~~~~~ 318 (369)
T 3cq5_A 255 LVR---------LPYHLSALSQAAAIVALRH-SADTLGTVEKLSVERVRVAARLEE--LGYAVVPS-E---SNFVFFGDF 318 (369)
T ss_dssp TTS---------CTTCSCHHHHHHHHHHHHT-HHHHHTHHHHHHHHHHHHHHHHHH--HTCEEECC-S---SSEEEEECC
T ss_pred HcC---------CCCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHh--CCCEECCC-C---CeEEEEECC
Confidence 322 1234666667766677764 235677888899999999999987 46766532 2 123333333
Q ss_pred cCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1696 FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1696 ~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.+..++...| +||.+++|. . .+++|++++ +.+|+++++++|++.
T Consensus 319 -~~~~~l~~~l~~~gi~v~~~~---~-------------------~~~iRis~~---~~~~i~~~~~~l~~~ 364 (369)
T 3cq5_A 319 -SDQHAAWQAFLDRGVLIRDVG---I-------------------AGHLRTTIG---VPEENDAFLDAAAEI 364 (369)
T ss_dssp -SSHHHHHHHHHHTTEECBCCS---C-------------------TTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHCCEEEEECC---C-------------------CCeEEEEeC---CHHHHHHHHHHHHHH
Confidence 3555666665 899998761 1 178999998 789999999999873
No 210
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.89 E-value=5.2e-22 Score=256.19 Aligned_cols=305 Identities=14% Similarity=0.100 Sum_probs=231.1
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCC
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 1483 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd 1483 (2602)
..++.+.+++.+.++....++.. ...++|+++++++++++++|++|+|+++++++++.++ +||
T Consensus 37 ~~~~~v~~a~~~~~~~~~~y~~~-----------~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~------~gd 99 (364)
T 1lc5_A 37 GMPVSVKRALIDNLDCIERYPDA-----------DYFHLHQALARHHQVPASWILAGNGETESIFTVASGL------KPR 99 (364)
T ss_dssp CCCHHHHHHHHHTGGGGGSCCCT-----------TCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH------CCS
T ss_pred CCCHHHHHHHHHHHHHhhcCCCC-----------CHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc------CCC
Confidence 46788999998887653333322 2468899999999998889999999999999998876 469
Q ss_pred EEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcC-hhHHHhhccCCceEEEEeccccccccccC---hHHHHHHhh
Q psy15216 1484 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLIT-LSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELCR 1559 (2602)
Q Consensus 1484 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id-~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l~~I~~ia~ 1559 (2602)
+|+++.|+|+++...+... |++++.++.+++..++ ++++.+.+++++++|++++|+||||.++| +++|.++|+
T Consensus 100 ~vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 176 (364)
T 1lc5_A 100 RAMIVTPGFAEYGRALAQS---GCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCK 176 (364)
T ss_dssp EEEEEESCCTHHHHHHHHT---TCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred eEEEeCCCcHHHHHHHHHc---CCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhh
Confidence 9999999999987766554 9999999987522233 57777778888999999999999999999 899999999
Q ss_pred hcCCEEEEecccccCcc----cccC-CCCCccEEEEccccccCCCc--eEEEE-EecCCCCccccccccCCccccCCCCC
Q psy15216 1560 SKGVIFHCDAAQAVGKI----DINI-QNYKVDLMSFSAHKIYGPKG--IGALY-IRRNPRTRIEAQIHGGGHEYGLRSGT 1631 (2602)
Q Consensus 1560 ~~gi~vivD~a~~~g~~----~~~l-~~~~~D~~v~S~~K~~gp~G--~G~l~-~~~~~~~~l~~~~~g~~~~~~~~~gt 1631 (2602)
+||+++|+|++|+.+.. .++. ...+.++++.|+||.+|++| +||++ .++++++.+.+.. ..++
T Consensus 177 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~---------~~~~ 247 (364)
T 1lc5_A 177 SLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQ---------MPWS 247 (364)
T ss_dssp HHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHS---------CTTC
T ss_pred hcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhC---------CCCC
Confidence 99999999999975432 1222 33567899999999888777 69999 8877666554432 1235
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCE
Q psy15216 1632 LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDI 1709 (2602)
Q Consensus 1632 ~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI 1709 (2602)
++...+.++.++|+. ..++++.++++.++++++.+.|.+ .+++.+..+ . .....+.++. +..++...| +||
T Consensus 248 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~-~---g~~~~~~~~~-~~~~l~~~l~~~gi 320 (364)
T 1lc5_A 248 VNALAALAGEVALQD-SAWQQATWHWLREEGARFYQALCQ-LPLLTVYPG-R---ANYLLLRCER-EDIDLQRRLLTQRI 320 (364)
T ss_dssp SCHHHHHHHHHGGGC-HHHHHHHHHHHHHHHHHHHHHHHT-STTEEECCC-S---SSEEEEEESC-TTCCHHHHHHTTTE
T ss_pred CCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHhc-CCCCEECCC-C---CeEEEEECCC-cHHHHHHHHHHCCc
Confidence 666777777677764 345778888889999999999987 678887532 2 2233344442 233455555 799
Q ss_pred EEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1710 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1710 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.+++|..|... ..+++||+++ +.+++++++++|++
T Consensus 321 ~v~~g~~~~~~-----------------~~~~iRis~~---~~~~~~~l~~~l~~ 355 (364)
T 1lc5_A 321 LIRSCANYPGL-----------------DSRYYRVAIR---SAAQNERLLAALRN 355 (364)
T ss_dssp ECEECTTSTTC-----------------CTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred EEeeCcccCCC-----------------CCCEEEEEeC---CHHHHHHHHHHHHH
Confidence 99998876421 1379999986 78999999999987
No 211
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.89 E-value=2.5e-22 Score=257.78 Aligned_cols=299 Identities=15% Similarity=0.099 Sum_probs=226.2
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
++++.+.+++.+.+...+.+|.. ..+++|+++|+++|+++++|++|+|+|+|+++++.++. ||
T Consensus 28 ~~~~~v~~a~~~~~~~~~~y~~~-----------~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~------gd 90 (350)
T 3fkd_A 28 GDKDHLEKHLVENLNCIRHYPEP-----------DAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR------GS 90 (350)
T ss_dssp SCCHHHHHHHHHTGGGGGSCCCT-----------TCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT------TC
T ss_pred CCCHHHHHHHHHhHhHHhcCCCC-----------cHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC------CC
Confidence 67889999999888655556543 12478999999999998999999999999999998864 89
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEecc-CCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcC
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKP-KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~-~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g 166 (2602)
+|+++.|.|+++...+... |++++.++. ++...+++ +++++|++++|+||||.++|+++|.++++.++
T Consensus 91 ~Vi~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~ 159 (350)
T 3fkd_A 91 RSLIAIPSFAEYEDACRMY---EHEVCFYPSNEDIGEADF--------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHP 159 (350)
T ss_dssp EEEEEESCCHHHHHHHHHT---TCEEEEEETTSCGGGSCC--------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCT
T ss_pred EEEEeCCCcHHHHHHHHHc---CCeEEEEecCCccccCcc--------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCC
Confidence 9999999999987666554 999999998 65444544 68999999999999999999999999998765
Q ss_pred -CEEEEeccccccccc-----ccCCCCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccccccccCcch
Q psy15216 167 -VIFHCDAAQAVGKID-----INIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238 (2602)
Q Consensus 167 -~~livD~a~a~g~~~-----~dl~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~ 238 (2602)
.++|+|++|+..... ..+...+.++++.|+||.+|++| +||+++++++++.+.... ..++++.
T Consensus 160 ~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~---------~~~~~~~ 230 (350)
T 3fkd_A 160 DTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFS---------TPWAVNA 230 (350)
T ss_dssp TSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTC---------CTTCSCH
T ss_pred CCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhC---------CCCCCCH
Confidence 799999998743211 12233455688999999888776 799999887766665432 2346677
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh---CCeEE
Q psy15216 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI---KDIAV 315 (2602)
Q Consensus 239 ~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L---~gI~v 315 (2602)
....++.++|+....+.+...+.. ++++++.+.|.+ +|++.+..+. ...+.+.++..+..++.+.| +||.+
T Consensus 231 ~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~L~~-~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~~gi~v 304 (350)
T 3fkd_A 231 LAIEAAKFILIHPAQFTLPIRKWQ-RNTVDFITALNR-LDGVEVHPSG----TTFFLLRLKKGTAAELKKYMLEEYNMLI 304 (350)
T ss_dssp HHHHHHHHHHHCTTTTCCCHHHHH-HHHHHHHHHHHH-STTEEECCCS----SSEEEEEESSSCHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHH-HHHHHHHHHHhc-CCCcEECCCC----CcEEEEECCCCCHHHHHHHHHHHCCEEE
Confidence 777777677763222233333333 888899999977 6898876432 23444666654666777666 69999
Q ss_pred cccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 316 SSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 316 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++|..|... ..+++||+++ +.+++++++++|++.
T Consensus 305 ~~g~~f~~~-----------------~~~~iRis~~---~~~~~~~l~~al~~~ 338 (350)
T 3fkd_A 305 RDASNFRGL-----------------DESYVRITTQ---RPAQNQLFIKALETF 338 (350)
T ss_dssp EECTTSTTC-----------------CTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred EeCccCCCC-----------------CCCEEEEEcC---CHHHHHHHHHHHHHH
Confidence 999877531 2489999987 889999999999964
No 212
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.89 E-value=2.3e-23 Score=231.76 Aligned_cols=147 Identities=39% Similarity=0.593 Sum_probs=130.8
Q ss_pred CCceeeeccccccceEeeeccEEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCC
Q psy15216 1005 DDNFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPM 1084 (2602)
Q Consensus 1005 ~~~~~~~dv~~~~~gi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~ 1084 (2602)
...+.+.||+|+|||+++.+|.|.+||||||+||+++++.|+|..|+|+.+.|.|||||+..+.+|..||+|.|+|+||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEEEEEEECCCeeEEEEEEEecCCceEEEEEecCCCCCHHHHHhhhhccccCCCchhHHHHhcc
Q psy15216 1085 PAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKNGAIFNENSGISLCDALLKNS 1153 (2602)
Q Consensus 1085 ~~g~~~i~v~f~~d~~g~l~v~a~~~~~g~~~~~~~~~~~~l~~~~i~~~~~~~~~~g~~~~~~~~~~~ 1153 (2602)
|+|.++|+|+|++|.||+|+|+|.++.||++..++|....+||++||++|+ ++++.+..-+..+...
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~~~Ls~eei~~mi--~~a~~~~~eD~~~~~~ 163 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMV--KNAEKYAEEDRRKKER 163 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCCCCCCHHHHHHHH--HHHHHSHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecCccCCHHHHHHHH--HHHHHHHHhHHHHHHH
Confidence 999999999999999999999999999999999999999889999999986 7776665555554333
No 213
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.89 E-value=1.5e-22 Score=265.96 Aligned_cols=324 Identities=15% Similarity=0.121 Sum_probs=233.1
Q ss_pred CCCHHHHHHHHHHHhh-ccCCCCCccchhHHHHHHHHHHHHHHHHHHh----CC--CCC-cEEEeCCHHHHHHHHHHhhh
Q psy15216 1404 PIDPRVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YA--DPR-EIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~-~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g~--~~~-~iv~t~gaT~al~~al~~l~ 1475 (2602)
+.++.+.+++.+.++. ...++.. . ...++|+++++++ |. +++ +|++|+|+++|+..++.++.
T Consensus 38 ~~~~~v~~a~~~~~~~~~~~y~~~------~----g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~ 107 (411)
T 2o0r_A 38 DGPPKMLQAAQDAIAGGVNQYPPG------P----GSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLV 107 (411)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCT------T----CCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCC------C----CCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhc
Confidence 4678899999998865 2222221 0 1234555555554 74 577 89999999999999999986
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC---CCcChhHHHhhccCCceEEEEeccccccccccC--
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN---GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP-- 1550 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~---~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~-- 1550 (2602)
++||+|+++.++|+++...+.. .|++++.++.+++ +.+|+++|++++++++++|++++|+||||.++|
T Consensus 108 ----~~gd~Vl~~~~~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~ 180 (411)
T 2o0r_A 108 ----EPGSEVLLIEPFYDSYSPVVAM---AGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSAT 180 (411)
T ss_dssp ----CTTCEEEEEESCCTTHHHHHHH---TTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred ----CCCCEEEEeCCCcHhHHHHHHH---cCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHH
Confidence 7999999999999998766554 4999999987653 568999999999999999999999999999988
Q ss_pred -hHHHHHHhhhcCCEEEEecccccCcc----cccC---CC-CCccEEEEccccccCCCc--eEEEEEecCCCCccccccc
Q psy15216 1551 -ILEIGELCRSKGVIFHCDAAQAVGKI----DINI---QN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIH 1619 (2602)
Q Consensus 1551 -l~~I~~ia~~~gi~vivD~a~~~g~~----~~~l---~~-~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~ 1619 (2602)
+++|.++|++||+++|+|++|+.+.. +.++ .. .+.|+++.|+||.+|++| +|++++++++++.+.....
T Consensus 181 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~ 260 (411)
T 2o0r_A 181 ELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQ 260 (411)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHh
Confidence 58999999999999999999975432 1222 11 467999999999888888 8999998776655543221
Q ss_pred cCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec---
Q psy15216 1620 GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--- 1696 (2602)
Q Consensus 1620 g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--- 1696 (2602)
...++.+...+.++.++|+....++++.++++.++++++.+.|.+ . ++.+..+.. +....+.++.
T Consensus 261 -------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---g~~~~~~~~~~~~ 328 (411)
T 2o0r_A 261 -------YLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTE-I-GFAVHDSYG---TYFLCADPRPLGY 328 (411)
T ss_dssp -------HHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-H-TCEECCCCB---SSEEEEECGGGTC
T ss_pred -------hccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH-c-CCEecCCCe---eEEEEEecCCCCC
Confidence 112234455566666777644556788889999999999999987 3 677654321 2233444443
Q ss_pred CCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1697 IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1697 ~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.+..++...| +||.+++|..|......+++.+. + ...+++||+++ ++.+++++++++|++
T Consensus 329 ~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~--~----~~~~~iRis~~--~~~e~i~~~~~~l~~ 391 (411)
T 2o0r_A 329 DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQA--D----VWNHLVRFTFC--KRDDTLDEAIRRLSV 391 (411)
T ss_dssp CCHHHHHHHHHHHHSEECEEGGGGSCCC----------C----CGGGCEEEECC--SCHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccc--c----CCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 2345666544 59999999877432101111110 0 02378999997 489999999999997
No 214
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.89 E-value=2e-22 Score=265.44 Aligned_cols=320 Identities=15% Similarity=0.166 Sum_probs=243.4
Q ss_pred CCCCCHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1402 TTPIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g--~~~~~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
..+.++.+.+++.+.++.. ++++.. ..++.+++++++++.++ +++++|+|++|+++|++.++.++.
T Consensus 72 ~~~~~~~v~~a~~~~~~~~~~~y~~~--------~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~--- 140 (421)
T 3l8a_A 72 DFLPVPEIKEAIINYGREHIFGYNYF--------NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFS--- 140 (421)
T ss_dssp CSCCCHHHHHHHHHHHHHCCSSCBCC--------CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS---
T ss_pred CCCCCHHHHHHHHHHHhcCCcCCCCC--------CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhc---
Confidence 3467889999999988752 222221 14567788888888888 677899999999999999999986
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccC-C--CCCcChhHHHhhcc-CCceEEEEeccccccccccC---h
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-N--NGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQP---I 1551 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-~--~~~id~d~l~~~i~-~~t~lv~l~~~~n~tG~~~~---l 1551 (2602)
++||+|+++.+.|+++...+... |.+++.++.+ . ++.+|+++|+++++ +++++|++++|+||||.++| +
T Consensus 141 -~~gd~Vi~~~~~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l 216 (421)
T 3l8a_A 141 -EKGDAVLINSPVYYPFARTIRLN---DHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDL 216 (421)
T ss_dssp -CTEEEEEEEESCCHHHHHHHHHT---TEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHH
T ss_pred -CCCCEEEECCCCcHHHHHHHHHC---CCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHH
Confidence 89999999999999987766655 9999999875 2 34589999999998 89999999999999999954 8
Q ss_pred HHHHHHhhhcCCEEEEecccccCc----ccccCCC-----CCccEEEEccccccCCCc--eEEEEEe-cCCCCccccccc
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGK----IDINIQN-----YKVDLMSFSAHKIYGPKG--IGALYIR-RNPRTRIEAQIH 1619 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~----~~~~l~~-----~~~D~~v~S~~K~~gp~G--~G~l~~~-~~~~~~l~~~~~ 1619 (2602)
++|.++|++||+++|+|++|+... ...++.. .+..+++.|++|.+|++| +|+++++ +++.+.+.+...
T Consensus 217 ~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~ 296 (421)
T 3l8a_A 217 IKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQL 296 (421)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHH
Confidence 899999999999999999987422 1112211 245588899999877666 6999988 555555543321
Q ss_pred cCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--C
Q psy15216 1620 GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--I 1697 (2602)
Q Consensus 1620 g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--~ 1697 (2602)
....++++...+.++.++++....++++..++..++++++.+.|.+ .+++.+..+... ....+.++. .
T Consensus 297 ------~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~i~~~~~~~~---~~~~v~~~~~~~ 366 (421)
T 3l8a_A 297 ------ANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEA-KTKIKVMEPEGT---YLVWLDFSAYAI 366 (421)
T ss_dssp ------HTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-HCSCEEECCSBS---SEEEEECGGGTC
T ss_pred ------hcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh-CCCceEeCCCee---EEEEEeccccCC
Confidence 1223467778888888888755566788899999999999999987 478887754322 122244443 3
Q ss_pred CcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1698 EGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1698 ~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+..++...| +||.+++|..|... ..+++||+++ ++.+++++++++|++.
T Consensus 367 ~~~~l~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRi~~~--~~~~~i~~~l~~l~~~ 418 (421)
T 3l8a_A 367 AQPQLSEKLQNEAKVVLNDGAHFGKE-----------------GKYFARLNVA--TPKNTVQEALSRIISV 418 (421)
T ss_dssp CTTHHHHHHHHTTCEECEEGGGGCGG-----------------GTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCEEEECchhhCCC-----------------CCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 556666655 49999999877532 2389999998 5899999999999873
No 215
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.89 E-value=2.4e-22 Score=247.46 Aligned_cols=203 Identities=22% Similarity=0.313 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHHHHHHHHHHHHcCCceeEeechhHHHHHHhhhccCCCCceEEE
Q psy15216 2139 IEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAV 2218 (2602)
Q Consensus 2139 ~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~~Aa~~AGl~~~~li~EP~AAAl~y~~~~~~~~~~vlV 2218 (2602)
.+....+|+++++.++...+.....+++|+|++|...+|++++++++.+|+++..++.||+|++++|+.. ..+|
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~------~~~v 143 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN------DGIV 143 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS------SEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC------CEEE
Confidence 4566788999999999888888889999999999999999999999999999999999999999988653 2589
Q ss_pred EEeCCceEEEEEEEEeCCEEEEEEEecCCCCchhHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHhcccceEEE
Q psy15216 2219 YDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKL 2298 (2602)
Q Consensus 2219 ~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~ 2298 (2602)
+|+||||+|+++++ ++.+ + ......+||.+||+.|.+++... ...++++|+.++
T Consensus 144 iDiGggst~~~~~~--~g~~--~-~~~~~~~Gg~~~~~~l~~~l~~~--------------~~~ae~~k~~~~------- 197 (272)
T 3h1q_A 144 VDIGGGTTGIAVIE--KGKI--T-ATFDEPTGGTHLSLVLAGSYKIP--------------FEEAETIKKDFS------- 197 (272)
T ss_dssp EEECSSCEEEEEEE--TTEE--E-EECCBSCCHHHHHHHHHHHHTCC--------------HHHHHHHHHSST-------
T ss_pred EEECCCcEEEEEEE--CCEE--E-EEecCCCcHHHHHHHHHHHhCCC--------------HHHHHHHHHhcC-------
Confidence 99999999999986 3432 2 34668999999999988876411 357888898775
Q ss_pred EEEecCCceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEEeCccchHHHHHHHHhhcCCcccCCCC
Q psy15216 2299 NVKLSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSID 2378 (2602)
Q Consensus 2299 ~i~~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~~~~~ 2378 (2602)
+++++++++.+.++++.+.+.+.++..+ +++.|+|+||+|++|.+++++++.|+.++..+.+
T Consensus 198 --------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~ 259 (272)
T 3h1q_A 198 --------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIH 259 (272)
T ss_dssp --------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSS
T ss_pred --------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHhCCCccccCC
Confidence 6889999999999999999999998764 4789999999999999999999999999999999
Q ss_pred ccchhhhHHHHHh
Q psy15216 2379 PDKAVVFGAAIQA 2391 (2602)
Q Consensus 2379 p~~aVa~GAa~~a 2391 (2602)
|++++|+|||++|
T Consensus 260 p~~a~a~Gaal~a 272 (272)
T 3h1q_A 260 PLLVTPLGIALFG 272 (272)
T ss_dssp GGGHHHHHHHTTC
T ss_pred hHHHHHHHHHhcC
Confidence 9999999999875
No 216
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.89 E-value=1.7e-22 Score=263.41 Aligned_cols=306 Identities=16% Similarity=0.138 Sum_probs=225.5
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHH-HHhCC
Q psy15216 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDG 110 (2602)
Q Consensus 32 ~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G 110 (2602)
.|.+++...+..+++|+++++++|++ +.++++ ++++|+++++.++. ++||+|+++.+.|+++...+.. ++..|
T Consensus 105 ~~~y~r~~~~~~~~l~~~lA~l~g~~-~~v~~~-sG~~Ai~~al~~l~----~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G 178 (445)
T 1qgn_A 105 SFEYGRYGNPTTVVLEEKISALEGAE-STLLMA-SGMCASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETILPKMG 178 (445)
T ss_dssp CCCBGGGCCHHHHHHHHHHHHHHTCS-EEEEES-CHHHHHHHHHHHHS----CSSCEEEEETTSCHHHHHHHHHTGGGGT
T ss_pred CccccCCCChHHHHHHHHHHHHhCCC-cEEEeC-CHHHHHHHHHHHHh----CCCCEEEEcCCCchhHHHHHHHHHHHcC
Confidence 34555555677899999999999986 455555 55599999999887 7999999999999998776653 46679
Q ss_pred cEEEEeccCCCCccChHHHHhhccCCc-eEEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccccccCCCCCc
Q psy15216 111 FRVTYLKPKNNGLITLSQLEEKICSDT-ILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKV 189 (2602)
Q Consensus 111 ~~v~~v~~~~~~~ld~e~l~~~i~~~t-klv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~ 189 (2602)
+++++++.+ |+++|+++++++| ++|++++|+||||.+.|+++|+++||+||+++|+|++|+.+... ....+++
T Consensus 179 ~~v~~v~~~-----d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~-~~~~~g~ 252 (445)
T 1qgn_A 179 ITATVIDPA-----DVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQ-KALALGA 252 (445)
T ss_dssp CEEEEECSS-----CHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-CTTTTTC
T ss_pred CEEEEeCCC-----CHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-CccccCC
Confidence 999999864 8999999999999 99999999999999999999999999999999999999877543 2345689
Q ss_pred cEEEeccccccCCCC---cEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q psy15216 190 DLMSFSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ 266 (2602)
Q Consensus 190 D~~~~S~~K~~Gp~G---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~ 266 (2602)
|++++|+||++|+.| +|++++++++++.+.+... ...++++....+.+..+++. +....+++.+++
T Consensus 253 Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~-------~~g~~~~~~~a~~~~~~l~~----l~~r~~~~~~~a 321 (445)
T 1qgn_A 253 DLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHH-------ILGGALNPNAAYLIIRGMKT----LHLRVQQQNSTA 321 (445)
T ss_dssp SEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHH-------HHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHH
T ss_pred EEEEECCcccccccccceEEEEEECHHHHHHHHHHHH-------HhCCCCCHHHHHHHHHhHHH----HHHHHHHHHHHH
Confidence 999999999988887 8999999876665543221 11223444443333344432 334445566667
Q ss_pred HHHHHHHhhccCce-EEeCCC--CC-----------CCCceEEEEEccc--ChhHHHHHhC--CeEEcccccCCCCC---
Q psy15216 267 KRLYNGLMESIEEI-YINGDM--NN-----------RIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACTSAS--- 325 (2602)
Q Consensus 267 ~~l~~~L~~~~~g~-~l~~~~--~~-----------~~~~~~~~~~~~~--~~~~~~~~L~--gI~v~~g~~~~~~~--- 325 (2602)
+++.+.|.+ .|++ .+..|. .. ..+.++.|.+++. +...++..|+ ++.++.|..|+...
T Consensus 322 ~~l~~~L~~-~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~ 400 (445)
T 1qgn_A 322 LRMAEILEA-HPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPA 400 (445)
T ss_dssp HHHHHHHHT-CTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHH
T ss_pred HHHHHHHhc-CCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeeccc
Confidence 888888877 6777 454331 11 1345666666642 2456777774 88889998886321
Q ss_pred -----CChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 326 -----LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 326 -----~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..++..+..+|+++ +.||+|+| .||++.+++.|++.
T Consensus 401 ~~~h~~~~~~~~~~~g~~~----~~iRlSvG----~Edid~li~~L~~a 441 (445)
T 1qgn_A 401 IMSYWDLSQSDRAKYGIMD----NLVRFSFG----VEDFDDLKADILQA 441 (445)
T ss_dssp HHHSTTSCHHHHHTTTCCS----SEEEEECC----SSCHHHHHHHHHHH
T ss_pred ccccccCCHHHHHhcCCCC----CeEEEEec----cCCHHHHHHHHHHH
Confidence 12344566778753 89999999 36799999998863
No 217
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.89 E-value=3.1e-22 Score=262.93 Aligned_cols=318 Identities=15% Similarity=0.128 Sum_probs=232.3
Q ss_pred CCCHHHHHHHHHHHhhh--cCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCC-CcEEEeCCHHHHHHHHHHhc
Q psy15216 8 PIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADP-REIIWTSGATESNNLAIKGA 78 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~--~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g------~~~-~~Iv~t~g~T~al~~~~~~l 78 (2602)
++|+.+.+++.+.+... ..++.. . ...++|+.++++++ +++ ++|++|+|+++|++.++.++
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~~y~~~------~----g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~ 105 (410)
T 3e2y_A 36 SPPSYVKEELSKAAFIDNMNQYTRG------F----GHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGL 105 (410)
T ss_dssp CCCHHHHHHHHHHHTCGGGGSCCCT------T----CCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCccccCCCCC------C----ChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHh
Confidence 67899999999988642 223221 0 12445566666554 566 79999999999999999998
Q ss_pred ccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccC-----------CCCccChHHHHhhccCCceEEEEecccC
Q psy15216 79 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-----------NNGLITLSQLEEKICSDTILVSVMLVNN 147 (2602)
Q Consensus 79 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-----------~~~~ld~e~l~~~i~~~tklv~i~~~~n 147 (2602)
. ++||+|+++.+.|+++...+... |++++.++.+ .++.+|++++++++++++++|++++|+|
T Consensus 106 ~----~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~n 178 (410)
T 3e2y_A 106 V----DPGDEVIIMVPFYDCYEPMVRMA---GAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHN 178 (410)
T ss_dssp C----CTTCEEEEEESCCTTHHHHHHHT---TCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCT
T ss_pred c----CCCCEEEEeCCCchhhHHHHHHc---CCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCCCC
Confidence 7 89999999999999987766554 9999998875 2456899999999999999999999999
Q ss_pred cccccc---cHHHHHHHHHhcCCEEEEeccccccc----ccccCC----CCCccEEEeccccccCCCC--cEEEEEecCC
Q psy15216 148 EIGVIQ---PILEIGELCRSKGVIFHCDAAQAVGK----IDINIQ----NYKVDLMSFSAHKIYGPKG--IGALYIRRNP 214 (2602)
Q Consensus 148 pTG~~~---~l~~I~~la~~~g~~livD~a~a~g~----~~~dl~----~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~ 214 (2602)
|||.++ ++++|+++|++||+++|+|++|+... .+..+. ..+.++++.|+||.+|++| +||+++++++
T Consensus 179 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~ 258 (410)
T 3e2y_A 179 PLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHL 258 (410)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHH
T ss_pred CCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHH
Confidence 999997 58889999999999999999997422 112222 1234588899999888777 8999998877
Q ss_pred CCcccceecCCCccccccccCcchhHHHHHHHHHHH-------HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCC
Q psy15216 215 RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-------ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN 287 (2602)
Q Consensus 215 ~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~-------~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~ 287 (2602)
++.+..... ...++++.+...++.++++. ...++++..++++++++++.+.|.+ . ++.+..+..
T Consensus 259 ~~~~~~~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~ 329 (410)
T 3e2y_A 259 IKHLQTVQQ-------NSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNS-V-GLKPIVPDG 329 (410)
T ss_dssp HHHHHHHHH-------TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHT-T-TCEEEBCSB
T ss_pred HHHHHHHHH-------hhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCCc
Confidence 666654321 12345666666666677752 1345788888999999999999987 3 777665433
Q ss_pred CCCCceEEEEEcccC------------hhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCC
Q psy15216 288 NRIPHNLNISFNFIE------------GESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR 352 (2602)
Q Consensus 288 ~~~~~~~~~~~~~~~------------~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~ 352 (2602)
. .+.++.+.... ..++...+ +||.+.+|..|.... ......+++||+++.
T Consensus 330 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~------------~~~~~~~~iRis~~~ 394 (410)
T 3e2y_A 330 G---YFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSK------------SKPHFEKLVRFCFIK 394 (410)
T ss_dssp S---SEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTT------------THHHHTTEEEEECCC
T ss_pred c---EEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCC------------CCCCCCCEEEEEEcC
Confidence 2 33344443311 12454443 599999998885420 001124899999885
Q ss_pred CCCHHHHHHHHHHHHh
Q psy15216 353 FTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 353 ~~t~edid~li~~L~~ 368 (2602)
+++++++++++|++
T Consensus 395 --~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 395 --KDSTLDAAEEIFRA 408 (410)
T ss_dssp --CHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHHHHHh
Confidence 99999999999985
No 218
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.89 E-value=4.3e-22 Score=259.18 Aligned_cols=316 Identities=15% Similarity=0.140 Sum_probs=233.4
Q ss_pred CCCHHHHHHHHHHHhhcc-CCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCC
Q psy15216 1404 PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 1482 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~-~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~g 1482 (2602)
+.++.+.+++.+.++... +++.+ .+..+ ......++|+++++++|++ +.++++++|+|+..++.++. ++|
T Consensus 53 ~~~~~v~~a~~~~~~~~~~~~~~~-~~~~g--~~~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~~~~~~~----~~g 123 (384)
T 1bs0_A 53 SHHPQIIRAWQQGAEQFGIGSGGS-GHVSG--YSVVHQALEEELAEWLGYS--RALLFISGFAANQAVIAAMM----AKE 123 (384)
T ss_dssp GGCHHHHHHHHHHHHHHCSCCCSB-TTTTC--CCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHC----CTT
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCc-CcccC--ChHHHHHHHHHHHHHhCCC--cEEEeCCcHHHHHHHHHHhC----CCC
Confidence 467889999999887622 22211 11111 2245788999999999985 56666666999999998876 899
Q ss_pred CEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCC---ceEEEEeccccccccccChHHHHHHhh
Q psy15216 1483 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD---TILVSVMLVNNEIGVIQPILEIGELCR 1559 (2602)
Q Consensus 1483 d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~---t~lv~l~~~~n~tG~~~~l~~I~~ia~ 1559 (2602)
|+|+++.+.|+++...+... |++++.++. +|+++|++++++. +++|++++++||||.++|+++|.++|+
T Consensus 124 d~v~~~~~~~~~~~~~~~~~---g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 195 (384)
T 1bs0_A 124 DRIAADRLSHASLLEAASLS---PSQLRRFAH-----NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQ 195 (384)
T ss_dssp CEEEEETTCCHHHHHHHHTS---SSEEEEECT-----TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHH
T ss_pred cEEEEcccccHHHHHHHHHc---CCCEEEeCC-----CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHH
Confidence 99999999999887766544 999998873 5899999999753 789999999999999999999999999
Q ss_pred hcCCEEEEecccccCccc------ccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccccCCccccCCCCCcc
Q psy15216 1560 SKGVIFHCDAAQAVGKID------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLA 1633 (2602)
Q Consensus 1560 ~~gi~vivD~a~~~g~~~------~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~ 1633 (2602)
+||+++|+|++|+.+... ......++|++++|+||.+||+| |++++++++++.+.+....+ . ..++++
T Consensus 196 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~~~~~~~~~~~l~~~~~~~----~-~~~~~~ 269 (384)
T 1bs0_A 196 QHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG-AAVLCSSTVADYLLQFARHL----I-YSTSMP 269 (384)
T ss_dssp HTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC-EEEEECHHHHHHHHHHCHHH----H-SSBCCC
T ss_pred HcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccC-cEEEeCHHHHHHHHHhchhh----h-cCCCCC
Confidence 999999999999866421 11112357899999999889988 99999887666554321000 0 112466
Q ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-CCcHHHHHhc--CCE
Q psy15216 1634 THQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI--KDI 1709 (2602)
Q Consensus 1634 ~~~~~al~~aL~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~L--~gI 1709 (2602)
...+.++.++++.... +.++..+++.++++++.+.|.+ . ++.+..+ . ..+..+.++. .+..++...| +||
T Consensus 270 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~-~---~~~~~~~~~~~~~~~~l~~~l~~~gi 343 (384)
T 1bs0_A 270 PAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQD-L-PFTLADS-C---SAIQPLIVGDNSRALQLAEKLRQQGC 343 (384)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-S-SCEECSC-C---SSBCCEEEESHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh-c-CCcccCC-C---CCEEEEEeCCHHHHHHHHHHHHHCCc
Confidence 7777777778886543 4578889999999999999987 3 6666521 1 2222344442 2345566665 799
Q ss_pred EEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1710 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1710 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.++++..+..+ ...+++||+++.++|.+++++++++|++
T Consensus 344 ~v~~~~~~~~~----------------~~~~~~Ri~~~~~~~~~~i~~~~~~l~~ 382 (384)
T 1bs0_A 344 WVTAIRPPTVP----------------AGTARLRLTLTAAHEMQDIDRLLEVLHG 382 (384)
T ss_dssp ECCEECTTSSC----------------TTCEEECCBCCTTCCHHHHHHHHHHHHH
T ss_pred EEEeecCCCCC----------------CCCceEEEEEcCCCCHHHHHHHHHHHHh
Confidence 99988754321 1237899999999999999999999986
No 219
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.89 E-value=3.2e-22 Score=261.83 Aligned_cols=316 Identities=13% Similarity=0.099 Sum_probs=231.3
Q ss_pred CCCCHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHHHHHHHHHH----hC--CCCCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQL----IY--ADPREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~----~g--~~~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
.+.++.+.+++.+.+... ..++. . ..++|+.++++ +| +++++|++|+|+++|++.++.++.
T Consensus 43 ~~~~~~v~~a~~~~~~~~~~~y~~------~------~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~ 110 (399)
T 1c7n_A 43 FKNPPELIEGLKKYLDETVLGYTG------P------TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFT 110 (399)
T ss_dssp SCCCHHHHHHHHHHHHHCCCSSBC------C------CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHhcCCCCCCC------C------cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhc
Confidence 356788999999888642 11211 1 34555666655 47 567899999999999999999986
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccC-CC--CCcChhHHHhhcc-CCceEEEEeccccccccccC-
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NN--GLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQP- 1550 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-~~--~~id~d~l~~~i~-~~t~lv~l~~~~n~tG~~~~- 1550 (2602)
++||+|+++.|+|+++...+.. .|++++.++.+ .+ +.+|+++|+++++ +++++|++++|+||||.++|
T Consensus 111 ----~~gd~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 183 (399)
T 1c7n_A 111 ----KPGDGVIIITPVYYPFFMAIKN---QERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK 183 (399)
T ss_dssp ----CTTCEEEECSSCCTHHHHHHHT---TTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred ----CCCCEEEEcCCCcHhHHHHHHH---cCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence 7999999999999998766544 49999999875 33 3589999999998 78999999999999999999
Q ss_pred --hHHHHHHhhhcCCEEEEecccccCc----ccccCCCC-----CccEEEEccccccCCCc--eEEEEEec-CCCCcccc
Q psy15216 1551 --ILEIGELCRSKGVIFHCDAAQAVGK----IDINIQNY-----KVDLMSFSAHKIYGPKG--IGALYIRR-NPRTRIEA 1616 (2602)
Q Consensus 1551 --l~~I~~ia~~~gi~vivD~a~~~g~----~~~~l~~~-----~~D~~v~S~~K~~gp~G--~G~l~~~~-~~~~~l~~ 1616 (2602)
+++|.++|++||+++|+|++|+... .+.++..+ +.++++.|+||.+|++| +|++++++ ++++.+.+
T Consensus 184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~ 263 (399)
T 1c7n_A 184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTK 263 (399)
T ss_dssp HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHH
Confidence 9999999999999999999997532 12233222 34688899999888777 79999974 45555544
Q ss_pred ccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec
Q psy15216 1617 QIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF 1696 (2602)
Q Consensus 1617 ~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~ 1696 (2602)
.... +..++++...+.++.++++.....+++.++++.++++++.+.|.+.+|++.+..+.. .....+.++.
T Consensus 264 ~~~~------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~~~~~~~~ 334 (399)
T 1c7n_A 264 SRDA------TSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEG---TYLQWIDFRA 334 (399)
T ss_dssp HHHH------TTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSB---SSEEEEECGG
T ss_pred HHhh------cccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCc---eEEEEEEccc
Confidence 3211 122356777777776777643456788888899999999999976356765543221 1222344443
Q ss_pred --CCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1697 --IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1697 --~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.+..++...| +||.+++|..|... ..+++||+++.. .++++++++.|++.
T Consensus 335 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRis~~~~--~~~l~~~l~~l~~~ 389 (399)
T 1c7n_A 335 LKMDHKAMEEFMIHKAQIFFDEGYIFGDG-----------------GIGFERINLAAP--SSVIQESLERLNKA 389 (399)
T ss_dssp GCCCHHHHHHHHHHTTCCCCEEGGGGCGG-----------------GTTEEEEECCSC--HHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCEEEeCccccCCC-----------------CCCeEEEEeccC--HHHHHHHHHHHHHH
Confidence 3455666555 59999998877421 137899999864 78999999999873
No 220
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.89 E-value=2.6e-22 Score=262.29 Aligned_cols=326 Identities=13% Similarity=0.080 Sum_probs=232.3
Q ss_pred ccCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCC-CCcEEE-eCCHHHHHHHHHHhhh
Q psy15216 1398 FKDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIW-TSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1398 L~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~-~~~iv~-t~gaT~al~~al~~l~ 1475 (2602)
+..+..+.++.+++++.+.. ++..+............+++|+++++++|++ +++|++ |+|+|+|+++++.++.
T Consensus 44 ~~~~~~~~~~~v~~a~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~ 118 (398)
T 2fyf_A 44 FGSGPSKVRLEQLQTLTTTA-----AALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLI 118 (398)
T ss_dssp CCSSSCCCCHHHHHGGGTTT-----TTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTC
T ss_pred ccCCCCCCCHHHHHHHhhcC-----CCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhc
Confidence 34555678888888886631 1111111123344567889999999999997 468998 9999999999999986
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhC--CcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHH
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLEND--GFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILE 1553 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~--G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~ 1553 (2602)
++| .+++....|.... ...+... |++++.++.+.+...+. .++++|++|++++++||||.++|+++
T Consensus 119 ----~~g-v~~v~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~g~~~~~-----~i~~~~~~v~~~~~~nptG~~~~~~~ 186 (398)
T 2fyf_A 119 ----DKR-SLHLTYGEFSAKF--ASAVSKNPFVGEPIIITSDPGSAPEP-----QTDPSVDVIAWAHNETSTGVAVAVRR 186 (398)
T ss_dssp ----SSC-EEEEECSHHHHHH--HHHHHHCTTSCCCEEEECCTTCCCCC-----CCCTTCSEEEEESEETTTTEECCCCC
T ss_pred ----CCC-eEEEeCCHHHHHH--HHHHHHhCCCCceEEEecCCCCCCCc-----cccCCCCEEEEeCcCCCcceecchHH
Confidence 677 2333444443211 1223334 78888888874332332 26789999999999999999999999
Q ss_pred HHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccccCCC-ceEEEEEecCCCCcccc---------ccccCCc
Q psy15216 1554 IGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPK-GIGALYIRRNPRTRIEA---------QIHGGGH 1623 (2602)
Q Consensus 1554 I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~-G~G~l~~~~~~~~~l~~---------~~~g~~~ 1623 (2602)
|.++ +|+++|+|++|+.+..++++. ++|++++|+||++|++ |+|++++++++++.+.+ .+..++.
T Consensus 187 i~~~---~~~~vivD~a~~~~~~~~~~~--~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 261 (398)
T 2fyf_A 187 PEGS---DDALVVIDATSGAGGLPVDIA--ETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPI 261 (398)
T ss_dssp CTTC---C-CEEEEECTTTTTTSCCCGG--GCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHH
T ss_pred hhhh---cCCeEEEEeccccCCcccCcc--cCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHH
Confidence 8876 899999999999988777654 3799999999988876 59999999877665521 1111110
Q ss_pred -c----ccCCCCCcchhHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHhhcCCcEEEeCC-CCCCCCceEEEEEe
Q psy15216 1624 -E----YGLRSGTLATHQIVGMGEAFRLARI-E-MKEELKRILFLQKRLYNGLMESIEEIYINGD-MNNRIPHNLNISFN 1695 (2602)
Q Consensus 1624 -~----~~~~~gt~~~~~~~al~~aL~~~~~-~-~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~-~~~~~~~~~~~~~~ 1695 (2602)
. .....++++...++++.++++.... + ++++.+++.++++++.+.|.+ ++++.+..+ +....+....+.++
T Consensus 262 ~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~ 340 (398)
T 2fyf_A 262 AVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQE-RPYTTPFVTDPGLRSQVVGTIDFV 340 (398)
T ss_dssp HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH-STTEEESCCSGGGBCSSEEEEEEC
T ss_pred HhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH-cCCceeccCChhhcCCcEEEEECC
Confidence 0 1244578888889889899986543 3 889999999999999999988 678888742 21223335555664
Q ss_pred -cCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1696 -FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1696 -~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+.+..++...| +||.+++|... ...+++|||++.++|.+|+++++++|++.
T Consensus 341 ~~~~~~~l~~~L~~~gI~v~~g~~~-------------------~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 394 (398)
T 2fyf_A 341 DDVDAGTVAKILRANGIVDTEPYRK-------------------LGRNQLRVAMFPAVEPDDVSALTECVDWV 394 (398)
T ss_dssp TTSCHHHHHHHHHHTTCBCCSCCTT-------------------TCSSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCcEEecCccc-------------------CCCCEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 34566777666 78988765211 01278999999999999999999999873
No 221
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.89 E-value=1.6e-22 Score=265.39 Aligned_cols=316 Identities=16% Similarity=0.157 Sum_probs=231.9
Q ss_pred CCHHHHHHHHHHHhhhc---CCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 9 IDPRVVDKMIPYLRVQF---GNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~---~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g--~~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
+++.+.+++.+.+.... .++.. ....++|+.+++++ | +++++|++|+|+|+|+++++.++.
T Consensus 50 ~~~~v~~a~~~~~~~~~~~~~y~~~----------~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~ 119 (407)
T 2zc0_A 50 PRAVLGEIAKEVLEKEPKSVMYTPA----------NGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLI 119 (407)
T ss_dssp CHHHHHHHHHHHHHHCGGGGSCCCT----------TCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhhccccccCCCC----------CCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhc
Confidence 55778888888876521 02111 12356677777777 8 567899999999999999999987
Q ss_pred cccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhcc----C--CceEE-EEecccCccccc
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC----S--DTILV-SVMLVNNEIGVI 152 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~----~--~tklv-~i~~~~npTG~~ 152 (2602)
++||+|+++.+.|+++...+. ..|++++.++.++++ +|+++|+++++ + ++++| ++++++||||.+
T Consensus 120 ----~~gd~vl~~~p~~~~~~~~~~---~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~ 191 (407)
T 2zc0_A 120 ----DPGDVVITENPSYINTLLAFE---QLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVT 191 (407)
T ss_dssp ----CTTCEEEEEESCCHHHHHHHH---TTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC
T ss_pred ----CCCCEEEEeCCChHHHHHHHH---HcCCEEEEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcC
Confidence 799999999999998766554 459999999987655 99999999997 6 78887 578999999999
Q ss_pred ccHH---HHHHHHHhcCCEEEEecccccccc----cccCCC---CCccEEEeccccccCCCC--cEEEEEecCCCCcccc
Q psy15216 153 QPIL---EIGELCRSKGVIFHCDAAQAVGKI----DINIQN---YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEA 220 (2602)
Q Consensus 153 ~~l~---~I~~la~~~g~~livD~a~a~g~~----~~dl~~---~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~ 220 (2602)
+|.+ +|+++|++||+++|+|++|+.+.. ...+.. .+.++++.|+||++| +| +||+++++++++.+.+
T Consensus 192 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~~~ 270 (407)
T 2zc0_A 192 MSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLM 270 (407)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecCHHHHHHHHH
Confidence 9987 899999999999999999976432 112222 234588899999888 56 8999998877666654
Q ss_pred eecCCCccccccccCcchhHHHHHHHHHHH--HH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEE
Q psy15216 221 QIHGGGHEYGLRSGTLATHQIVGMGEAFRL--AR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNIS 297 (2602)
Q Consensus 221 ~~~g~~~~~~~~~gt~~~~~~~al~~al~~--~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~ 297 (2602)
....+ ..+++.....++.++++. .. .++++..+++.++++++.+.|.+..+++.+..+.. ..++.+.
T Consensus 271 ~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~~~~~ 340 (407)
T 2zc0_A 271 QKQPI-------DFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIA---GMFVMFF 340 (407)
T ss_dssp HHTTT-------TSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSB---SSEEEEE
T ss_pred HHHhh-------cCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCC---cEEEEEE
Confidence 33211 122355555566666663 23 45677888889999999999977456766544322 2344455
Q ss_pred Ec-ccChhHHHHHh--C-CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 298 FN-FIEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 298 ~~-~~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++ ..+..++...| + ||.+++|..|.+. ....+++||+++.. +++++++++++|++.
T Consensus 341 ~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~---------------~~~~~~iRis~~~~-~~~~i~~~~~~l~~~ 400 (407)
T 2zc0_A 341 LPEGADGISFANELMEREGVVVVPGKPFYTD---------------ESGKNAIRLNFSRP-SKEEIPIGIKKLAKL 400 (407)
T ss_dssp CSTTCCHHHHHHHHHHHTCEECBCSGGGCSS---------------SCCTTEEEEECSSS-CTTHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhCCeEEECchhccCC---------------CCCCCeEEEEeCCC-CHHHHHHHHHHHHHH
Confidence 54 24566777777 5 9999999877542 01137899999876 899999999999864
No 222
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.89 E-value=3.9e-23 Score=238.63 Aligned_cols=136 Identities=45% Similarity=0.669 Sum_probs=128.7
Q ss_pred eeeeccccccceEeeeccEEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCCCCC
Q psy15216 1008 FLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAG 1087 (2602)
Q Consensus 1008 ~~~~dv~~~~~gi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~~~g 1087 (2602)
+++.||+|+||||++.+|.|.+||||||+||+++++.|+|..|||+.+.|.|||||+..+.+|..||+|.|+|+||+|+|
T Consensus 1 ~~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G 80 (219)
T 4e81_A 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG 80 (219)
T ss_dssp CCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTT
T ss_pred CeEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEECCCeeEEEEEEEecCCceEEEEEecCCCCCHHHHHhhhhccccCCCch
Q psy15216 1088 RARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKNGAIFNENSGISL 1145 (2602)
Q Consensus 1088 ~~~i~v~f~~d~~g~l~v~a~~~~~g~~~~~~~~~~~~l~~~~i~~~~~~~~~~g~~~ 1145 (2602)
.++|+|+|+||.||+|+|+|.++.||++..++|...++||++||++|+ ++++-+..
T Consensus 81 ~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~Ls~eeI~~m~--~~a~~~~~ 136 (219)
T 4e81_A 81 MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMV--RDAEANAE 136 (219)
T ss_dssp CSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTCSCCHHHHHHHH--HHHHHTHH
T ss_pred CceEEEEEEeCCCCCEeeeeeccccCccceEeeeccccccHHHHHHHH--HHHHHhhh
Confidence 999999999999999999999999999999999998889999999987 55555433
No 223
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.89 E-value=6.1e-22 Score=258.22 Aligned_cols=316 Identities=12% Similarity=0.112 Sum_probs=231.0
Q ss_pred CCCCHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHH-HHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEK-ARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGA 1474 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~-lr~~ia~~~----g--~~~~~iv~t~gaT~al~~al~~l 1474 (2602)
.+.++.+.+++.+.++.. ..++.. ..+ +|+.+++++ | +++++|++|+|+++|+++++.++
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~~y~~~------------~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l 107 (390)
T 1d2f_A 40 FATAPCIIEALNQRLMHGVFGYSRW------------KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQW 107 (390)
T ss_dssp SCCCHHHHHHHHHHHTTCCCCCCCS------------CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHhCCCCCCCCC------------ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHh
Confidence 356789999999988641 122211 234 666666665 6 67789999999999999999998
Q ss_pred hhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC---CCcChhHHHhhccC-CceEEEEeccccccccccC
Q psy15216 1475 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN---GLITLSQLEEKICS-DTILVSVMLVNNEIGVIQP 1550 (2602)
Q Consensus 1475 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~---~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~~~~ 1550 (2602)
. ++||+|+++.|+|+++...+... |++++.++.+++ +.+|+++|++++++ ++++|++++|+||||.++|
T Consensus 108 ~----~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~ 180 (390)
T 1d2f_A 108 S----ETGEGVVIHTPAYDAFYKAIEGN---QRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT 180 (390)
T ss_dssp S----CTTCEEEEEESCCHHHHHHHHHT---TCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCC
T ss_pred c----CCCCEEEEcCCCcHHHHHHHHHC---CCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcC
Confidence 7 79999999999999987766544 999999987643 24899999999986 8999999999999999999
Q ss_pred ---hHHHHHHhhhcCCEEEEecccccCc----ccccCCCCC---ccEEEEccccccCCCc--eEEEEEe-cCCCCccccc
Q psy15216 1551 ---ILEIGELCRSKGVIFHCDAAQAVGK----IDINIQNYK---VDLMSFSAHKIYGPKG--IGALYIR-RNPRTRIEAQ 1617 (2602)
Q Consensus 1551 ---l~~I~~ia~~~gi~vivD~a~~~g~----~~~~l~~~~---~D~~v~S~~K~~gp~G--~G~l~~~-~~~~~~l~~~ 1617 (2602)
+++|.++|++||+++|+|++|+... ...++..+. .|. +.|+||.+|++| +|+++++ +++++.+...
T Consensus 181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 259 (390)
T 1d2f_A 181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSA 259 (390)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHH
Confidence 8899999999999999999997632 222332222 266 899999888777 7999996 4555555433
Q ss_pred cccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-
Q psy15216 1618 IHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF- 1696 (2602)
Q Consensus 1618 ~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~- 1696 (2602)
..+ ....++++...+.++.++++.....+++.++++.++++++.+.|.+.+|++.+..+.. +....+.++.
T Consensus 260 ~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~~~~~~~~~ 331 (390)
T 1d2f_A 260 LKG-----RDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQS---TYLAWLDLRPL 331 (390)
T ss_dssp HHT-----TSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSB---CSEEEEECGGG
T ss_pred Hhh-----hcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCc---cEEEEEEcccc
Confidence 210 1223467777777777777754456788888999999999999976456765543221 1222344443
Q ss_pred -CCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1697 -IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1697 -~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.+..++...| +||.+++|..|... ..+++||+++. +.++++++++.|++.
T Consensus 332 ~~~~~~l~~~l~~~~gi~v~~g~~f~~~-----------------~~~~~Ris~~~--~~~~l~~~l~~l~~~ 385 (390)
T 1d2f_A 332 NIDDNALQKALIEQEKVAIMPGYTYGEE-----------------GRGFVRLNAGC--PRSKLEKGVAGLINA 385 (390)
T ss_dssp CCCHHHHHHHHHHTTCEECEEGGGGCGG-----------------GTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCEEeeCccccCCC-----------------CCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 3555666555 59999998877421 13789999986 578999999999863
No 224
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.89 E-value=5.3e-22 Score=259.63 Aligned_cols=317 Identities=14% Similarity=0.123 Sum_probs=223.8
Q ss_pred CCCCHHHHHHHHHHHhh-----ccCCCCCccchhHHHHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRV-----QFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~-----~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g--~~~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
.+.++.+.+++.+.++. ...++.. ....++.+.+.+++.+.+| +++++|++|+|+|+|++.++.++.
T Consensus 47 ~~~~~~v~~a~~~~~~~~~~~~~~~y~~~------~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~ 120 (398)
T 3ele_A 47 IPAPQIVNDTIKELVTDYDSVALHGYTSA------QGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALT 120 (398)
T ss_dssp SCCCHHHHHHHHHHHHHSCHHHHHSCCCT------TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHhcCCccccCCcCCC------CCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHc
Confidence 35678899999998875 2233221 0112233344444444445 577899999999999999999987
Q ss_pred hhhccCC-CEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHhhccCCceEEEEeccccccccccC---
Q psy15216 1476 HFYKKRG-KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP--- 1550 (2602)
Q Consensus 1476 ~~~~~~g-d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~--- 1550 (2602)
++| |+|+++.|.|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++|
T Consensus 121 ----~~g~d~vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~ 193 (398)
T 3ele_A 121 ----SDAYDEFITIAPYFPEYKVFVNAA---GARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEET 193 (398)
T ss_dssp ----CSTTCEEEEESSCCTHHHHHHHHT---TCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHH
T ss_pred ----CCCCCEEEEeCCCchhhHHHHHHc---CCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHH
Confidence 899 99999999999987766554 99999999875 5679999999999999999999999999999999
Q ss_pred hHHHHHHhhh------cCCEEEEecccccCc-----ccccCCCCCccEEEEccccccCCCc--eEEEEEecCCCCc--cc
Q psy15216 1551 ILEIGELCRS------KGVIFHCDAAQAVGK-----IDINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTR--IE 1615 (2602)
Q Consensus 1551 l~~I~~ia~~------~gi~vivD~a~~~g~-----~~~~l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~--l~ 1615 (2602)
+++|+++|++ ||+++|+|++|+... .+......+.++++.|+||.+|++| +||+++++++.+. +.
T Consensus 194 l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 273 (398)
T 3ele_A 194 IKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELY 273 (398)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHH
T ss_pred HHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHH
Confidence 6677789998 999999999987522 2222233456788999999888777 8999999876552 11
Q ss_pred cccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe
Q psy15216 1616 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN 1695 (2602)
Q Consensus 1616 ~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~ 1695 (2602)
...... .......+++.....++..+++.. ..++++.++++++.+.|.+ . ++.+..+.. .....+.++
T Consensus 274 ~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~~ 341 (398)
T 3ele_A 274 AAVCGA--GRALGYVCAPSLFQKMIVKCQGAT-----GDINAYKENRDLLYEGLTR-I-GYHCFKPDG---AFYMFVKAL 341 (398)
T ss_dssp HHHHHH--HHHTTCCCSCHHHHHHHTTCTTCC-----CCHHHHHHHHHHHHHHHHH-H-TCCEECCSB---SSEEEEECS
T ss_pred HHHHHH--hhhccccCCCHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHHH-c-CCeecCCCe---eEEEEEEcC
Confidence 111000 001112234444444443443311 1356677788888888877 2 555554322 122334444
Q ss_pred cCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1696 FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1696 ~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
..+..++...| +||.+++|..|..+ +++||+++ ++.+++++++++|++.
T Consensus 342 ~~~~~~~~~~l~~~gi~v~~g~~~~~~-------------------~~iRis~~--~~~e~i~~~l~~l~~~ 392 (398)
T 3ele_A 342 EDDSNAFCEKAKEEDVLIVAADGFGCP-------------------GWVRISYC--VDREMIKHSMPAFEKI 392 (398)
T ss_dssp SSCHHHHHHHHHTTTEECEESGGGTCT-------------------TEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCEEEeCccccCCC-------------------CeEEEEec--CCHHHHHHHHHHHHHH
Confidence 44566666666 79999999887543 79999997 6999999999999873
No 225
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.3e-22 Score=265.07 Aligned_cols=318 Identities=14% Similarity=0.126 Sum_probs=232.7
Q ss_pred CCCHHHHHHHHHHHhh--ccCCCCCccchhHHHHHHHHHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1404 PIDPRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~--~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g--~~~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
+.++.+.+++.+.++. ...++.. ....++|+++++++ | .++++|++|+|+++|+..++.++.
T Consensus 70 ~~~~~v~~a~~~~~~~~~~~~Y~~~----------~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~ 139 (447)
T 3b46_A 70 SPPQFAIKEAQKALDIPMVNQYSPT----------RGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLL 139 (447)
T ss_dssp CCCHHHHHHHHHHTTSGGGGSCCCT----------TCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHhCcCCCCCCCC----------CCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHc
Confidence 4678899999988864 1222221 01356777777776 4 356789999999999999999987
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC------------CCCcChhHHHhhccCCceEEEEecccc
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN------------NGLITLSQLEEKICSDTILVSVMLVNN 1543 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~------------~~~id~d~l~~~i~~~t~lv~l~~~~n 1543 (2602)
++||+|++++|.|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+|
T Consensus 140 ----~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~n 212 (447)
T 3b46_A 140 ----NAGDEVIVFEPFFDQYIPNIELC---GGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHN 212 (447)
T ss_dssp ----CTTCEEEEEESCCTTHHHHHHHT---TCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCT
T ss_pred ----CCCCEEEEeCCCchhHHHHHHHc---CCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCCC
Confidence 89999999999999987766554 99999998754 356999999999999999999999999
Q ss_pred ccccccC---hHHHHHHhhhcCCEEEEecccccCcc---cccCC-----CCCccEEEEccccccCCCc--eEEEEE-ecC
Q psy15216 1544 EIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI---DINIQ-----NYKVDLMSFSAHKIYGPKG--IGALYI-RRN 1609 (2602)
Q Consensus 1544 ~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~---~~~l~-----~~~~D~~v~S~~K~~gp~G--~G~l~~-~~~ 1609 (2602)
|||.++| +++|+++|++||+++|+|++|+.... ...+. ..+.++++.|+||.+|++| +||+++ +++
T Consensus 213 ptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~ 292 (447)
T 3b46_A 213 PIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAE 292 (447)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHH
T ss_pred CCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHH
Confidence 9999986 88999999999999999999975321 11221 2357899999999888888 899999 776
Q ss_pred CCCccccccccCCccccCCCCCcchhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCC
Q psy15216 1610 PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIP 1687 (2602)
Q Consensus 1610 ~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~--~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~ 1687 (2602)
+++.+..... ....+.+.+.+.++.++|+.. ...+++.+++++++++++.+.|.+ . ++.+..+...
T Consensus 293 l~~~l~~~~~-------~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~g--- 360 (447)
T 3b46_A 293 LLSYAAKAHT-------RICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDE-L-GLPYTAPEGT--- 360 (447)
T ss_dssp HHHHHHHHHH-------HHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-H-TCCEECCSBS---
T ss_pred HHHHHHHHHh-------hccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCCee---
Confidence 6655543211 112345666677777888754 445788889999999999999987 3 6655533221
Q ss_pred ceEEEEEecC----------------CcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCC
Q psy15216 1688 HNLNISFNFI----------------EGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR 1748 (2602)
Q Consensus 1688 ~~~~~~~~~~----------------~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~ 1748 (2602)
....+.++.. +..++...| +||.+.+|..|.... ......+++||+++.
T Consensus 361 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~------------~~~~~~~~iRls~~~ 428 (447)
T 3b46_A 361 YFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKE------------HEKAAENLLRFAVCK 428 (447)
T ss_dssp SEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGG------------GGGGGTTEEEEECCS
T ss_pred EEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCC------------ccCCCCCEEEEEEeC
Confidence 2223333321 233565544 699999998775420 000113799999984
Q ss_pred CCCHHHHHHHHHHHHH
Q psy15216 1749 FTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1749 ~~t~edid~li~~L~~ 1764 (2602)
+.+++++++++|++
T Consensus 429 --~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 429 --DDAYLENAVERLKL 442 (447)
T ss_dssp --CHHHHHHHHHHGGG
T ss_pred --CHHHHHHHHHHHHH
Confidence 89999999999986
No 226
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.89 E-value=1.7e-22 Score=266.83 Aligned_cols=289 Identities=17% Similarity=0.179 Sum_probs=215.5
Q ss_pred HHHHHHHHHHHhC--------CCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEE
Q psy15216 43 IEKARNEVAQLIY--------ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVT 114 (2602)
Q Consensus 43 ~~~~r~~lA~~~g--------~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~ 114 (2602)
..++|+.++++++ +++++|++++|+++++.+++.++. ++||+|+++.+.|+++...+. ...|++++
T Consensus 85 ~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~----~~gd~Vl~~~p~y~~~~~~~~--~~~g~~~~ 158 (428)
T 1iay_A 85 LPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLA----DPGDAFLVPSPYYPAFNRDLR--WRTGVQLI 158 (428)
T ss_dssp CHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHC----CTTCEEEEESSCCTTHHHHTT--TTTCCEEE
T ss_pred cHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhC----CCCCeEEEccCCCcchHHHHH--HhcCCEEE
Confidence 3567777777776 678899999999999999999987 799999999999999765332 23599999
Q ss_pred EeccCC--CCccChHHHHhhcc------CCceEEEEecccCccccccc---HHHHHHHHHhcCCEEEEecccccccc---
Q psy15216 115 YLKPKN--NGLITLSQLEEKIC------SDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI--- 180 (2602)
Q Consensus 115 ~v~~~~--~~~ld~e~l~~~i~------~~tklv~i~~~~npTG~~~~---l~~I~~la~~~g~~livD~a~a~g~~--- 180 (2602)
.++.++ ++.+|+++++++++ +++++|++++|+||||.++| +++|.++|++||+++|+|++|+....
T Consensus 159 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~ 238 (428)
T 1iay_A 159 PIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTP 238 (428)
T ss_dssp EECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSS
T ss_pred EeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCC
Confidence 998864 45789999999886 37899999999999999999 88999999999999999999975321
Q ss_pred -ccc---CCC------CCcc--EEEeccccccCCCC--cEEEEE-ecCCCCcccceecCCCccccccccCcchhHHHHHH
Q psy15216 181 -DIN---IQN------YKVD--LMSFSAHKIYGPKG--IGALYI-RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMG 245 (2602)
Q Consensus 181 -~~d---l~~------~~~D--~~~~S~~K~~Gp~G--~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~ 245 (2602)
..+ +.. +++| +++.|+||.+|++| +|++++ ++++++.+.... ..++.+.++..++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~ 309 (428)
T 1iay_A 239 QFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMS---------SFGLVSTQTQYFLA 309 (428)
T ss_dssp CCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHH---------TTSCCCHHHHHHHH
T ss_pred CccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHH---------hcccCCHHHHHHHH
Confidence 111 111 1256 88899999998888 599998 455555554321 12345666666666
Q ss_pred HHHHH---HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEccc-------ChhHHHHHh--C-C
Q psy15216 246 EAFRL---ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-------EGESLLMAI--K-D 312 (2602)
Q Consensus 246 ~al~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~L--~-g 312 (2602)
++++. ...++++..+++.++++++.+.|.+ . ++.+..+.. ..++.+.++.. ...++.+.| + |
T Consensus 310 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 384 (428)
T 1iay_A 310 AMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV-V-GIKCLKNNA---GLFCWMDLRPLLRESTFDSEMSLWRVIINDVK 384 (428)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCBCCCSS---SSEEEEECGGGCSSSSHHHHHHHHHHHHHTSC
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-CCcccCCCe---eEEEEEechhhcCCCchhHHHHHHHHHHHhCC
Confidence 66662 2346778888999999999999987 3 665543321 23444555432 223566665 4 9
Q ss_pred eEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 313 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 313 I~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
|.++++..|... ..+++||+++ .++++++++++++|++.
T Consensus 385 i~v~~~~~~~~~-----------------~~~~iRis~~-~~~~e~i~~~~~~l~~~ 423 (428)
T 1iay_A 385 LNVSPGSSFECQ-----------------EPGWFRVCFA-NMDDGTVDIALARIRRF 423 (428)
T ss_dssp EECEEGGGGTCS-----------------SSSEEEEECS-SSCHHHHHHHHHHHHHH
T ss_pred EEEeCchhhCCC-----------------CCCEEEEEEe-cCCHHHHHHHHHHHHHH
Confidence 999988766431 1378999998 57999999999999864
No 227
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.89 E-value=3.5e-22 Score=262.08 Aligned_cols=314 Identities=13% Similarity=0.076 Sum_probs=232.7
Q ss_pred CCCHHHHHHHHHHHhhcc-CCCCCccchhHHHHHHHHHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHHHhhhh
Q psy15216 1404 PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGAAH 1476 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~-~np~~~~~~~~~~~~~~~~~lr~~ia~~~g------~~~~~iv~t~gaT~al~~al~~l~~ 1476 (2602)
+.++.+.+++ +.+.... .++.. ....++|+.++++++ ++++++++|+|+|+|+..++.++.
T Consensus 56 ~~~~~v~~a~-~~l~~~~~~y~~~----------~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~- 123 (409)
T 2gb3_A 56 KTPEVFFERI-YENKPEVVYYSHS----------AGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIA- 123 (409)
T ss_dssp CCCTHHHHHH-HHTCCSSCCCCCT----------TCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHH-HHHhcCCCCCCCC----------CCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhC-
Confidence 4567888998 7775421 12211 123567777777774 466889999999999999999986
Q ss_pred hhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC--CCCcChhHHHhhccCCceEEEEeccccccccccC---h
Q psy15216 1477 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 1551 (2602)
Q Consensus 1477 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l 1551 (2602)
++||+|++++++|+++...+... |++++.++.++ ++.+ +++|++++++++++|++++|+||||.++| +
T Consensus 124 ---~~gd~Vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~-~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l 196 (409)
T 2gb3_A 124 ---NPGDEILVLEPFYANYNAFAKIA---GVKLIPVTRRMEEGFAI-PQNLESFINERTKGIVLSNPCNPTGVVYGKDEM 196 (409)
T ss_dssp ---CTTCEEEEEESCCTHHHHHHHHH---TCEEEEEECCGGGTSCC-CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred ---CCCCEEEEcCCCchhHHHHHHHc---CCEEEEeccCCCCCCcc-HHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHH
Confidence 79999999999999988777666 99999999875 3445 89999999999999999999999999986 8
Q ss_pred HHHHHHhhhcCCEEEEecccccCcc---ccc-CCC-CCccEEEEccccccCCCc--eEEEEEec-CCCCccccccccCCc
Q psy15216 1552 LEIGELCRSKGVIFHCDAAQAVGKI---DIN-IQN-YKVDLMSFSAHKIYGPKG--IGALYIRR-NPRTRIEAQIHGGGH 1623 (2602)
Q Consensus 1552 ~~I~~ia~~~gi~vivD~a~~~g~~---~~~-l~~-~~~D~~v~S~~K~~gp~G--~G~l~~~~-~~~~~l~~~~~g~~~ 1623 (2602)
++|.++|++||+++|+|++|+.+.. +.+ +.. .+.|++++|+||.+|++| +|++++++ ++++.+.+....+
T Consensus 197 ~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~-- 274 (409)
T 2gb3_A 197 RYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGR-- 274 (409)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhcc--
Confidence 8999999999999999999976532 122 222 256899999999888888 89999988 7666655433111
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEE-eCCCCCCCCceEEEEEecCCcHHH
Q psy15216 1624 EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYI-NGDMNNRIPHNLNISFNFIEGESL 1702 (2602)
Q Consensus 1624 ~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i-~~~~~~~~~~~~~~~~~~~~~~~~ 1702 (2602)
. +++...+.++.++|+....++++..+++.++++++.+.|.+ . ++.+ ..+.. .....+.++..+..++
T Consensus 275 -----~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~---~~~~~~~~~~~~~~~l 343 (409)
T 2gb3_A 275 -----L-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEE-H-GLKRFTKPSG---AFYITAELPVEDAEEF 343 (409)
T ss_dssp -----C-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCBCCCSB---SSEEEEECSSSCHHHH
T ss_pred -----C-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH-c-CceeeeCCCe---eEEEEEEeCCCCHHHH
Confidence 1 45666666666777533455778888899999999999987 4 6655 32211 2222333443455667
Q ss_pred HHhc--C------CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1703 LMAI--K------DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1703 ~~~L--~------gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
...| + ||.+++|..|... .....+++||+++ ++.+++++++++|++.
T Consensus 344 ~~~l~~~~~~~~~gi~v~~g~~f~~~--------------~~~~~~~iRis~~--~~~e~i~~~~~~l~~~ 398 (409)
T 2gb3_A 344 ARWMLTDFNMDGETTMVAPLRGFYLT--------------PGLGKKEIRIACV--LEKDLLSRAIDVLMEG 398 (409)
T ss_dssp HHHHHHSCCBTTEEEECEEGGGGCSS--------------TTTTSSEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHHHhccccccCcEEEeCchHhCCC--------------CCCCCCEEEEEeC--CCHHHHHHHHHHHHHH
Confidence 6665 5 9999998876531 0012379999998 7999999999999973
No 228
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.89 E-value=1.8e-22 Score=265.16 Aligned_cols=314 Identities=14% Similarity=0.134 Sum_probs=230.7
Q ss_pred CCCHHHHHHHHHHHhhc--cCCCCCccchhHHHHHHHHHHHHHHHHHHh----CC--CC-CcEEEeCCHHHHHHHHHHhh
Q psy15216 1404 PIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLI----YA--DP-REIIWTSGATESNNLAIKGA 1474 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~--~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g~--~~-~~iv~t~gaT~al~~al~~l 1474 (2602)
+.++.+.+++.+.++.. ..++. .....++|+.+++++ |. ++ ++|++|+|+++|+.+++.++
T Consensus 50 ~~~~~v~~a~~~~~~~~~~~~y~~----------~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~ 119 (412)
T 2x5d_A 50 PTPPHIVEKLCTVAQREDTHGYST----------SRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLAT 119 (412)
T ss_dssp CCCHHHHHHHHHTC---------C----------TTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCC----------CCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHh
Confidence 45778888888876542 11111 112456778888877 75 56 69999999999999999998
Q ss_pred hhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC-C-CcChhHHHhhccCCceEEEEeccccccccccC--
Q psy15216 1475 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-G-LITLSQLEEKICSDTILVSVMLVNNEIGVIQP-- 1550 (2602)
Q Consensus 1475 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~-~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~-- 1550 (2602)
. ++||+|+++.++|+++...+... |++++.++.+++ + .+|+++|++++++++++|++++|+||||.++|
T Consensus 120 ~----~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~ 192 (412)
T 2x5d_A 120 L----DHGDTILVPNPSYPIHIYGAVIA---GAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELD 192 (412)
T ss_dssp C----CTTCEEEEEESCCHHHHHHHHHH---TCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHH
T ss_pred C----CCCCEEEEcCCCchhHHHHHHHc---CCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHH
Confidence 6 89999999999999988777665 999999998764 3 37899999999999999999999999999998
Q ss_pred -hHHHHHHhhhcCCEEEEecccccCcc----cccCCC----CCccEEEEccccccCCCc--eEEEEEecCCCCccccccc
Q psy15216 1551 -ILEIGELCRSKGVIFHCDAAQAVGKI----DINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIH 1619 (2602)
Q Consensus 1551 -l~~I~~ia~~~gi~vivD~a~~~g~~----~~~l~~----~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~ 1619 (2602)
+++|.++|++||+++|+|++|+.+.. +.++.. .+.++++.|+||.+|++| +||+++++++++.+.....
T Consensus 193 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~ 272 (412)
T 2x5d_A 193 FFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKS 272 (412)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHHHHHh
Confidence 67899999999999999999986432 122222 356899999999888777 7999998876665544321
Q ss_pred cCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-C-
Q psy15216 1620 GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-I- 1697 (2602)
Q Consensus 1620 g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-~- 1697 (2602)
...++.+...+.++.++|+....++++.++++.++++++.+.|.+ . ++.+..+.. .....+.++. .
T Consensus 273 -------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---g~~~~~~~~~~~~ 340 (412)
T 2x5d_A 273 -------YHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLRE-A-GWMVENPKA---SMYVWAKIPEPYA 340 (412)
T ss_dssp -------HHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHH-H-TCCCCCCSB---SSEEEEECCTTTG
T ss_pred -------hhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCEecCCCe---eeEEEEEcCCccC
Confidence 112356666677676777643445788888999999999999987 3 554432211 1223344432 2
Q ss_pred --CcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1698 --EGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1698 --~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+..++...| +||.+++|..|... ..+++||+++. +.++++++++.|++.
T Consensus 341 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRis~~~--~~~~l~~~l~~l~~~ 394 (412)
T 2x5d_A 341 HLGSLEFAKKLLQDAKVSVSPGIGFGDY-----------------GDDHVRFALIE--NRDRLRQAVRGIKAM 394 (412)
T ss_dssp GGCHHHHHHHHHHHHCEECEEGGGGCGG-----------------GTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCEEEeCchhhCCC-----------------CCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 455666665 49999999877421 13789999986 889999999999873
No 229
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.89 E-value=3.5e-22 Score=259.06 Aligned_cols=288 Identities=16% Similarity=0.140 Sum_probs=224.1
Q ss_pred HHHHHHHHHHHh-CCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-
Q psy15216 43 IEKARNEVAQLI-YADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN- 120 (2602)
Q Consensus 43 ~~~~r~~lA~~~-g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~- 120 (2602)
..++|+.+++++ +++++++++++|+++|+.+++.++. ++||+|+++.+.|+++...+... |++++.+++++
T Consensus 65 ~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~----~~gd~Vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~ 137 (375)
T 3op7_A 65 SPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLI----EPGDHVISLYPTYQQLYDIPKSL---GAEVDLWQIEEE 137 (375)
T ss_dssp CHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHC----CTTCEEEEEESSCTHHHHHHHHT---TCEEEEEEEEGG
T ss_pred hHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhc----CCCCEEEEeCCCchhHHHHHHHc---CCEEEEEecccc
Confidence 467899999998 5788899999999999999999987 89999999999999987665544 99999998864
Q ss_pred -CCccChHHHHhhccCCceEEEEecccCccccccc---HHHHHHHHHhcCCEEEEeccccccccc-c-c-CCCCCccEEE
Q psy15216 121 -NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKID-I-N-IQNYKVDLMS 193 (2602)
Q Consensus 121 -~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l~~I~~la~~~g~~livD~a~a~g~~~-~-d-l~~~~~D~~~ 193 (2602)
++.+|+++|++++++++++|++++|+||||.++| +++|.++|++||+++|+|++|+..... + . ....+.++++
T Consensus 138 ~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~ 217 (375)
T 3op7_A 138 NGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAV 217 (375)
T ss_dssp GTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEE
T ss_pred CCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEE
Confidence 4568999999999999999999999999999999 999999999999999999998764321 1 0 1123456889
Q ss_pred eccccccCCCC--cEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q psy15216 194 FSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYN 271 (2602)
Q Consensus 194 ~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~ 271 (2602)
.|+||.+|++| +||+++++++++.+..... ....+++....+++..+++....++++.+++..++++++.+
T Consensus 218 ~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 290 (375)
T 3op7_A 218 NSLSKTYSLPGIRIGWVAANHQVTDILRDYRD-------YTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQ 290 (375)
T ss_dssp EESSSSSSCGGGCCEEEECCHHHHHHHTTTGG-------GTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEChhhcCCcccceEEEEeCHHHHHHHHHHHh-------hhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999888777 6999998877766654331 11234455666666677775555677888888999999999
Q ss_pred HHhhccCceEEeCCCCCCCCceEEEEEcc-cChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEE
Q psy15216 272 GLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (2602)
Q Consensus 272 ~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (2602)
.|.+ .+++.+..+... ...++.++. .+..++...+ +||.+++|..|.. .+++|
T Consensus 291 ~l~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iR 347 (375)
T 3op7_A 291 WIEE-EPLVSYIRPAVV---STSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFER-------------------DGYVR 347 (375)
T ss_dssp HHHH-CTTEEECCCSSS---SCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTC-------------------TTEEE
T ss_pred HHhh-CCCceEecCCCe---EEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCC-------------------CCeEE
Confidence 9987 678887654332 234455543 3556666655 5999998877643 27899
Q ss_pred EecCCCCCHHHHHHHHHHHHhh
Q psy15216 348 FTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 348 is~~~~~t~edid~li~~L~~~ 369 (2602)
++++. +.+++++++++|++.
T Consensus 348 i~~~~--~~~~i~~~l~~l~~~ 367 (375)
T 3op7_A 348 LGFAC--EQETLIKGLEKLSQF 367 (375)
T ss_dssp ECCCS--CHHHHHHHHHHHHHH
T ss_pred EEecC--CHHHHHHHHHHHHHH
Confidence 99885 458999999999864
No 230
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.89 E-value=5.8e-23 Score=269.70 Aligned_cols=320 Identities=14% Similarity=0.108 Sum_probs=236.5
Q ss_pred CCCCHHHHHHHHHHHhhc--cCCCCCccchhHHHHHHHHHHHHHHHHHHhCCC--C-CcEEEeCCHHHHHHHHHHhhhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--P-REIIWTSGATESNNLAIKGAAHF 1477 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~--~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~--~-~~iv~t~gaT~al~~al~~l~~~ 1477 (2602)
.+.++.+++++.+.++.. .+++.. ....++.+++++++++++|.+ + ++|++|+|+++|++.++.++.
T Consensus 52 ~~~~~~v~~a~~~~~~~~~~~~y~~~------~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~-- 123 (407)
T 3nra_A 52 HEPTPGAFDLFSAGVQSGGVQAYTEY------RGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATV-- 123 (407)
T ss_dssp SCCCTTHHHHHHHHHHHTHHHHSCCT------TCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTC--
T ss_pred CCCcHHHHHHHHHHHhcCCCCCcCCC------CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhC--
Confidence 367888999999988752 122211 112356778888899989873 3 689999999999999999886
Q ss_pred hccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEecc------CCCCCcChhHHHhhccCCceEEEEeccccccccccC-
Q psy15216 1478 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP------KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP- 1550 (2602)
Q Consensus 1478 ~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~------~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~- 1550 (2602)
++||+|+++.++|+++...++.. |++++.++. +.++.+|+++|++++++++++|++++|+||||.++|
T Consensus 124 --~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~ 198 (407)
T 3nra_A 124 --ARGDKVAIVQPDYFANRKLVEFF---EGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSA 198 (407)
T ss_dssp --CTTCEEEEEESCCTHHHHHHHHT---TCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCH
T ss_pred --CCCCEEEEcCCcccchHHHHHHc---CCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCH
Confidence 89999999999999987666555 999999998 356779999999999999999999999999999999
Q ss_pred --hHHHHHHhhhcCCEEEEecccccCc----ccccC-----CCCCccEEEEccccccCCCc--eEEEEEecCCCCccccc
Q psy15216 1551 --ILEIGELCRSKGVIFHCDAAQAVGK----IDINI-----QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQ 1617 (2602)
Q Consensus 1551 --l~~I~~ia~~~gi~vivD~a~~~g~----~~~~l-----~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~ 1617 (2602)
+++|+++|++||+++|+|++|+.+. ....+ ...+.++++.|+||.+|++| +||++.++++++.+...
T Consensus 199 ~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~ 278 (407)
T 3nra_A 199 EEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKL 278 (407)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHH
Confidence 9999999999999999999997632 11122 12446689999999888666 79999987766655443
Q ss_pred cccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-
Q psy15216 1618 IHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF- 1696 (2602)
Q Consensus 1618 ~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~- 1696 (2602)
... + ..+++...+.++..+++.....+++..++.+++++++.+.|.+ .+++.+..+... ....+.++.
T Consensus 279 ~~~------~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~---~~~~~~~~~~ 347 (407)
T 3nra_A 279 QAI------V-SLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRG-CEGVFARTPQAG---SYLFPRLPKL 347 (407)
T ss_dssp HHH------H-TSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHT-STTCBCCCCSBS---SEECCBCCCB
T ss_pred Hhh------h-ccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc-CCCceeccCCee---EEEEEeCCCC
Confidence 211 1 1233444444444444422234677788889999999999987 677766533221 222223332
Q ss_pred -CCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1697 -IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1697 -~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.+..++...| +||.+++|..|.+. ..+++|++++. +.+++++++++|++.
T Consensus 348 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~-----------------~~~~iRis~~~--~~~~i~~~~~~l~~~ 401 (407)
T 3nra_A 348 AVAPAEFVKILRLQAGVVVTPGTEFSPH-----------------TADSVRLNFSQ--DHEAAVAAARRIVTL 401 (407)
T ss_dssp SSCHHHHHHHHHHHHCEECEEGGGTCTT-----------------CTTBEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhCCC-----------------CCCEEEEEeCC--CHHHHHHHHHHHHHH
Confidence 3455666665 49999999887642 13789999984 899999999999873
No 231
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.89 E-value=4.6e-22 Score=259.22 Aligned_cols=330 Identities=12% Similarity=0.076 Sum_probs=226.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEE
Q psy15216 11 PRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHII 90 (2602)
Q Consensus 11 ~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vl 90 (2602)
+.+++++.+.+... +. ++......+++|+.+++++|.+ +.|++++ +|+|+++++.++. +++||+|+
T Consensus 17 ~~~~~a~~~~l~~~--~~-------~~~~~~~~~~l~~~la~~~~~~-~~i~~~s-Gt~al~~~l~~l~---~~~gd~Vi 82 (388)
T 1b9h_A 17 DAERNGLVRALEQG--QW-------WRMGGDEVNSFEREFAAHHGAA-HALAVTN-GTHALELALQVMG---VGPGTEVI 82 (388)
T ss_dssp HHHHHHHHHHHHTS--CC-------BTTTCSHHHHHHHHHHHHTTCS-EEEEESC-HHHHHHHHHHHTT---CCTTCEEE
T ss_pred HHHHHHHHHHHHcC--Ce-------eecCCHHHHHHHHHHHHHhCCC-eEEEeCC-HHHHHHHHHHHcC---CCCcCEEE
Confidence 88999999988752 10 0111235788999999999986 4555555 5999999999983 27999999
Q ss_pred EcCCCCcccHHHHHHHHhCCcEEEEeccCCC-CccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEE
Q psy15216 91 TVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIF 169 (2602)
Q Consensus 91 v~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~l 169 (2602)
++.++|+++...+... |++++.++++++ +.+|+++|+++++++|++|+ |+||||.+.|+++|.++|++||+++
T Consensus 83 ~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~l 156 (388)
T 1b9h_A 83 VPAFTFISSSQAAQRL---GAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISADTGVPL 156 (388)
T ss_dssp EESSSCTHHHHHHHHT---TCEEEEECBCTTTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCB
T ss_pred ECCCccHHHHHHHHHc---CCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHHcCCEE
Confidence 9999999998766544 999999999864 78999999999998998887 8899999999999999999999999
Q ss_pred EEeccccccccc--ccCCCCCccEEEec--cccccCCCCcEEEEEecC-C--CCcccceecCCCc---cccc---cccC-
Q psy15216 170 HCDAAQAVGKID--INIQNYKVDLMSFS--AHKIYGPKGIGALYIRRN-P--RTRIEAQIHGGGH---EYGL---RSGT- 235 (2602)
Q Consensus 170 ivD~a~a~g~~~--~dl~~~~~D~~~~S--~~K~~Gp~G~G~l~~~~~-~--~~~l~~~~~g~~~---~~~~---~~gt- 235 (2602)
|+|++|+.|..+ .++..++ |+.++| .||.+++..+|+++.+++ + ++.+.... +++. .+.+ ..|+
T Consensus 157 i~D~a~~~g~~~~~~~~~~~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~ 234 (388)
T 1b9h_A 157 LQDAAHAHGARWQGKRVGELD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRH-SCGRPRDDRRYFHKIAGSN 234 (388)
T ss_dssp CEECTTCTTCEETTEEGGGSS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHT-BTTCCTTCSSCCCCSCCCB
T ss_pred EEecchhcCCccCCeeccccc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHH-hCCCCccCccceeeccccc
Confidence 999999987644 3333344 455555 457553333699998875 3 33333221 1111 1111 1233
Q ss_pred --cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCC---CCCCceEEEEEccc---ChhHHH
Q psy15216 236 --LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---NRIPHNLNISFNFI---EGESLL 307 (2602)
Q Consensus 236 --~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~---~~~~~~~~~~~~~~---~~~~~~ 307 (2602)
++..+.+++..+ ...+++..++++++++++.+.|.+ ++++.+..+.. ...+.++.+.++.. +..++.
T Consensus 235 ~~~~~~~~a~~~~~----~~~l~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 309 (388)
T 1b9h_A 235 MRLNEFSASVLRAQ----LARLDEQIAVRDERWTLLSRLLGA-IDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALV 309 (388)
T ss_dssp CBCBHHHHHHHHHH----HTTHHHHHHHHHHHHHHHHHHHHT-STTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHH
T ss_pred CCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcc-CCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHH
Confidence 333333332222 234566778888899999999987 68888875322 12234556666643 455677
Q ss_pred HHh--CCeEEcccccCCCCCCChHHHH------------HHcCCCccCCCCeEEEecCCCC-CHHHHHHHHHHHHhh
Q psy15216 308 MAI--KDIAVSSGSACTSASLEPSYVL------------RALGCNDELAHSSIRFTIGRFT-TEKEIDFTIKLLKMK 369 (2602)
Q Consensus 308 ~~L--~gI~v~~g~~~~~~~~~~~~~~------------~~~g~~~~~~~~~iRis~~~~~-t~edid~li~~L~~~ 369 (2602)
..| +||.++++.. +.+..+.+.. ..++..+....+.||++++.++ |++||++++++|++.
T Consensus 310 ~~L~~~gI~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~ 384 (388)
T 1b9h_A 310 DRLVEAGLPAFAAFR--AIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADA 384 (388)
T ss_dssp HHHHHTTCCEEECCC--CGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCcccccC--ccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHH
Confidence 776 7999987643 2222222210 0122222223467999999999 999999999999863
No 232
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.89 E-value=1.4e-21 Score=262.54 Aligned_cols=342 Identities=16% Similarity=0.172 Sum_probs=235.1
Q ss_pred eeeccC-CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHH
Q psy15216 1395 NIVFKD-ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTSGATESNNLAIK 1472 (2602)
Q Consensus 1395 ~v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~-~~iv~t~gaT~al~~al~ 1472 (2602)
..|++. .+.+.++.+++++..... |+....+..+.....+..++++++++++|+++ ++++||+|+|+|+..++.
T Consensus 101 ~~yl~~~~~~~~~~~v~~~~~~~~~----n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~ 176 (497)
T 2qma_A 101 PDCIAHLHTPPLMPAVAAEAMIAAL----NQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLM 176 (497)
T ss_dssp TTBCSSSCCCCBHHHHHHHHHHHHH----CCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHH
T ss_pred CCeeEeCCCCCcHHHHHHHHHHHhh----cccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHH
Confidence 356654 334667777777766543 22222344455667778888999999999965 789999999999999998
Q ss_pred hhhhhhc---------cC------CC-EEEEcCCCCcchHHHHHHHHhCCc-EEEEeccCCCCCcChhHHHhhccCC---
Q psy15216 1473 GAAHFYK---------KR------GK-HIITVQTEHKSVLDSIRKLENDGF-RVTYLKPKNNGLITLSQLEEKICSD--- 1532 (2602)
Q Consensus 1473 ~l~~~~~---------~~------gd-~Vlv~~~~~~s~~~~~~~~~~~G~-~v~~v~~~~~~~id~d~l~~~i~~~--- 1532 (2602)
++..... .+ |+ +|+++.++|+++..++..+.. |. +++.++.++++.+|+++|+++|+++
T Consensus 177 ~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~-g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~ 255 (497)
T 2qma_A 177 LARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGL-GEKAVMTVDANADGTMDITKLDEVIAQAKAE 255 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTS-CGGGEEEECBCTTSSBCGGGHHHHHHHHHHT
T ss_pred HHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCC-CcccEEEEecCCCCcCCHHHHHHHHHHHHHC
Confidence 8532111 12 46 899999999999888776621 33 7999999888999999999999754
Q ss_pred -ce--EEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCccccc----CCCC-CccEEEEcccc-ccCCCceEE
Q psy15216 1533 -TI--LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN----IQNY-KVDLMSFSAHK-IYGPKGIGA 1603 (2602)
Q Consensus 1533 -t~--lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~----l~~~-~~D~~v~S~~K-~~gp~G~G~ 1603 (2602)
++ +|++++++|+||.+.|+++|.++|++||+|+|+|++|+.+..+.+ +..+ ++|++++|+|| +++|.|+|+
T Consensus 256 ~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~ 335 (497)
T 2qma_A 256 GLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTISCGA 335 (497)
T ss_dssp TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSSCEE
T ss_pred CCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcceEE
Confidence 44 899999999999999999999999999999999999988776554 3333 67999999999 667888999
Q ss_pred EEEecCC-CCcccc--ccc-cCCcc-ccCC----CCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy15216 1604 LYIRRNP-RTRIEA--QIH-GGGHE-YGLR----SGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESI 1673 (2602)
Q Consensus 1604 l~~~~~~-~~~l~~--~~~-g~~~~-~~~~----~gt~~~~~~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~ 1673 (2602)
++++++. ++.+.. .+. +.... .... .++..+. ..++..+++ +...+++++.++..++++++.+.|.+ .
T Consensus 336 l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~-al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~ 413 (497)
T 2qma_A 336 LLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFD-ALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRT-N 413 (497)
T ss_dssp EEESCGGGGGGGCC--------------------CCSCCCT-HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred EEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchh-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhh-C
Confidence 9998653 222211 010 00000 0000 0111111 223445555 33456888999999999999999987 7
Q ss_pred CcEEEeCCCCCCCCceEEEEEecCC--c----HHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEe
Q psy15216 1674 EEIYINGDMNNRIPHNLNISFNFIE--G----ESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT 1745 (2602)
Q Consensus 1674 ~gl~i~~~~~~~~~~~~~~~~~~~~--~----~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls 1745 (2602)
+++.+..++. ..+..|.+.... . ..+...+ +|+.+.++..+. ..+++|++
T Consensus 414 ~~~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~-------------------g~~~lRis 471 (497)
T 2qma_A 414 DQFELLAEPS---LSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVD-------------------GKTALKFT 471 (497)
T ss_dssp TTEEECSCCS---SSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEET-------------------TEEEEEEE
T ss_pred CCeEEEcCCC---ceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEEC-------------------CEEEEEEE
Confidence 8998875432 234445543321 1 1233333 354443222111 12689999
Q ss_pred c-CCCCCHHHHHHHHHHHHHh
Q psy15216 1746 I-GRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1746 ~-~~~~t~edid~li~~L~~~ 1765 (2602)
+ ++++|.+|++++++.|++.
T Consensus 472 ~~~~~~t~edi~~~~~~l~~~ 492 (497)
T 2qma_A 472 ILNPCLTTSDFESLLSKINML 492 (497)
T ss_dssp CCCTTCCHHHHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHHH
Confidence 8 8899999999999999873
No 233
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.89 E-value=3.5e-22 Score=259.24 Aligned_cols=312 Identities=12% Similarity=-0.022 Sum_probs=229.2
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC--CCCcEEEeCCHHHHHHHHHHhcccccccC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA--DPREIIWTSGATESNNLAIKGAAHFYKKR 85 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~--~~~~Iv~t~g~T~al~~~~~~l~~~~~~~ 85 (2602)
++|+.+.+++.+.+.....++... ...++.+.+.+++++.+|+ ++++|++|+|+++|+++++.++. ++
T Consensus 36 ~~~~~v~~a~~~~~~~~~~y~~~~------g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~----~~ 105 (376)
T 3ezs_A 36 ETPKFIQDALKNHTHSLNIYPKSA------FEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVL----FD 105 (376)
T ss_dssp CCCHHHHHHHHTTGGGGGSCCCTT------CCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHT----TT
T ss_pred CCCHHHHHHHHHhhhhcCCCCCCC------CCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHc----CC
Confidence 567899999988775444444321 1123445555555555587 77899999999999999999987 78
Q ss_pred --CCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCccccccc---HHHHHH
Q psy15216 86 --GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGE 160 (2602)
Q Consensus 86 --gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l~~I~~ 160 (2602)
||+|+++.+.|+++...+... |++++.++.++++.+++ +++++++++++++++++|+||||.++| +++|++
T Consensus 106 ~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~-~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~ 181 (376)
T 3ezs_A 106 YQNPTIAYPNPFYQIYEGAAKFI---KAKSLLMPLTKENDFTP-SLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVK 181 (376)
T ss_dssp CSSCEEEEEESCCTHHHHHHHHT---TCEEEEEECCGGGTSCC-CCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred CCCCEEEEecCCcHhHHHHHHHc---CCEEEEcccCCCCCcch-hHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHH
Confidence 999999999999987766554 99999999887655666 777778788999999999999999998 556777
Q ss_pred HHHhcCCEEEEecccccccc---cccCC---------CCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCC
Q psy15216 161 LCRSKGVIFHCDAAQAVGKI---DINIQ---------NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGG 226 (2602)
Q Consensus 161 la~~~g~~livD~a~a~g~~---~~dl~---------~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~ 226 (2602)
+|++||+++|+|++|+.... +..+. ..+.++++.|+||.+|++| +||++.++++++.+.+...
T Consensus 182 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~--- 258 (376)
T 3ezs_A 182 LALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRA--- 258 (376)
T ss_dssp HHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHT---
T ss_pred HHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHh---
Confidence 79999999999999975332 12111 3466799999999888777 7999998877766654321
Q ss_pred ccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHH
Q psy15216 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESL 306 (2602)
Q Consensus 227 ~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 306 (2602)
...++++.+...++.++++. ..++++..+++.++++++.+.|. ++. .+. ......+.++ +..++
T Consensus 259 ----~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~----~~~--~~~---~~~~~~~~~~--~~~~~ 322 (376)
T 3ezs_A 259 ----YLGYTSANAIQKASEAAWLD-DRHAEFFRNIYANNLKLARKIFK----NTL--IYP---YSFYVYLPVQ--NGENF 322 (376)
T ss_dssp ----TTCCCCCHHHHHHHHHHHHC-SHHHHHHHHHHHHHHHHHHHHST----TCC--CCS---BSSEEEEECS--CHHHH
T ss_pred ----hhcCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHhc----CCC--CCC---cceEEEEECC--CHHHH
Confidence 12346777777777777773 23467888888888888888885 332 111 1233334444 56666
Q ss_pred HHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 307 LMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 307 ~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
...| +||.+++|..|... ....+++||+++. +++++++++++|++.
T Consensus 323 ~~~l~~~~gi~v~~g~~~~~~---------------~~~~~~iRis~~~--~~~~i~~~l~~l~~~ 371 (376)
T 3ezs_A 323 AKTLYQNEGIITLPALYLGRN---------------RIGADYVRLALVY--DTPLLEKPLEIIETY 371 (376)
T ss_dssp HHHHHHHHCCBCEEGGGGCST---------------TTTTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEeCcHHhCCC---------------CCCCCeEEEEEcC--CHHHHHHHHHHHHHH
Confidence 6666 59999999887631 1124899999974 999999999999863
No 234
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.88 E-value=8.9e-22 Score=256.53 Aligned_cols=330 Identities=13% Similarity=0.143 Sum_probs=233.0
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhh---hc
Q psy15216 1403 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF---YK 1479 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~---~~ 1479 (2602)
...++++++++.+.+...+..+ .....++|+.+++++|.+ ++++++|+|+|++.++.++... .+
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~~-----------~~~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~al~~~~~~~~~~~ 77 (390)
T 3b8x_A 11 STWDDLEYKAIQSVLDSKMFTM-----------GEYVKQYETQFAKTFGSK--YAVMVSSGSTANLLMIAALFFTKKPRL 77 (390)
T ss_dssp CCCCHHHHHHHHHHHHHTCCSS-----------CHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTSSSSCSC
T ss_pred CCCCHHHHHHHHHHHHcCCCCC-----------ChHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHHhhhhcCC
Confidence 4567889999998887532111 135788999999999976 6888999999999999998100 03
Q ss_pred cCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC-CCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHh
Q psy15216 1480 KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELC 1558 (2602)
Q Consensus 1480 ~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia 1558 (2602)
++||+|+++.++|+++...+... |+++++++++++ +.+|+++|+++++++|++|+++| ++|...|+++|.++|
T Consensus 78 ~~g~~Vi~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~ 151 (390)
T 3b8x_A 78 KKGDEIIVPAVSWSTTYYPLQQY---GLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPNNFDEINKII 151 (390)
T ss_dssp CTTCEEEEESSSCHHHHHHHHHT---TCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHH
T ss_pred CCcCEEEECCCCcHHHHHHHHHc---CCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEEC---CccChhhHHHHHHHH
Confidence 78999999999999998877654 999999999875 88999999999999999999975 588889999999999
Q ss_pred hhcCCEEEEecccccCcccccCCCCCc--cEEEEcc---ccccCCCceEEEEEec-CCCCccccccccC--Cc-------
Q psy15216 1559 RSKGVIFHCDAAQAVGKIDINIQNYKV--DLMSFSA---HKIYGPKGIGALYIRR-NPRTRIEAQIHGG--GH------- 1623 (2602)
Q Consensus 1559 ~~~gi~vivD~a~~~g~~~~~l~~~~~--D~~v~S~---~K~~gp~G~G~l~~~~-~~~~~l~~~~~g~--~~------- 1623 (2602)
++||+++|+|++|+.|... +...++. |+.++|+ ||+.++.| |+++.++ ++.+.+.+...++ ..
T Consensus 152 ~~~~~~li~D~a~~~g~~~-~~~~~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~ 229 (390)
T 3b8x_A 152 GGRDIILLEDNCESMGATF-NNKCAGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNKV 229 (390)
T ss_dssp TTSCCEEEEECTTCTTCEE-TTEETTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEETT
T ss_pred HHcCCEEEEECcCcccCEE-CCcccccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhcCCCccccccccc
Confidence 9999999999999988765 4444443 6666553 44655666 9999886 4444444433222 00
Q ss_pred -----------c-----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCC
Q psy15216 1624 -----------E-----YGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIP 1687 (2602)
Q Consensus 1624 -----------~-----~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~ 1687 (2602)
. .++..++.++...+++. ++ ..+++..++.+++++++.+.|.+ ++++.+..++....+
T Consensus 230 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~-~l----~~l~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~ 303 (390)
T 3b8x_A 230 TGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIE-QL----KKLPRFISVRRKNAEYFLDKFKD-HPYLDVQQETGESSW 303 (390)
T ss_dssp TEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHHHTT-CSSEEECCCCSBCCC
T ss_pred cccccccccccccceeccccccCcCHHHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHHhcC-CCCcccCCCCCCccc
Confidence 0 11222355555555443 23 34567888889999999999987 788888754322223
Q ss_pred ceEEEEEe---cCCcHHHHHhc--CCEEEcc---ccccCC-CCCChhHH------HHHcCCCccccCCeEEEecCCCCCH
Q psy15216 1688 HNLNISFN---FIEGESLLMAI--KDIAVSS---GSACTS-ASLEPSYV------LRALGCNDELAHSSIRFTIGRFTTE 1752 (2602)
Q Consensus 1688 ~~~~~~~~---~~~~~~~~~~L--~gI~v~~---g~~~~~-~~~~~~~~------~~~~~~~~~~~~~~iRls~~~~~t~ 1752 (2602)
....+.++ +.+.+++...| +||.+++ +..|.. + .+. ...++.++....+.||||+++++|.
T Consensus 304 ~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~ 379 (390)
T 3b8x_A 304 FGFSFIIKKDSGVIRKQLVENLNSAGIECRPIVTGNFLKNTD----VLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELF 379 (390)
T ss_dssp CEEEEEECTTSCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHH----HHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCH
T ss_pred EEEEEEecCcCcccHHHHHHHHHHCCCCeeeecCCchhhcch----hhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCH
Confidence 33445555 34566777766 7998886 333332 2 110 0112222333346899999999999
Q ss_pred HHHHHHHHHHH
Q psy15216 1753 KEIDFTIKLLK 1763 (2602)
Q Consensus 1753 edid~li~~L~ 1763 (2602)
+||++++++|+
T Consensus 380 ~di~~i~~~l~ 390 (390)
T 3b8x_A 380 DEIDYLREVLK 390 (390)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhhC
Confidence 99999998873
No 235
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.88 E-value=1.5e-21 Score=260.01 Aligned_cols=333 Identities=14% Similarity=0.131 Sum_probs=235.4
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCC
Q psy15216 1403 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 1482 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~g 1482 (2602)
....+.+.+++.+.+. ..+|.. .+..+....+...++++++++++|++. .+++++|+|+|+..+++++.....++|
T Consensus 76 ~~~~p~v~~~~~~~~~--~~~~~~-~~~~~~g~~~l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~~~~~~~~~~G 151 (474)
T 1wyu_B 76 MKYNPKLHEEAARLFA--DLHPYQ-DPRTAQGALRLMWELGEYLKALTGMDA-ITLEPAAGAHGELTGILIIRAYHEDRG 151 (474)
T ss_dssp CCCCCHHHHHHHHTTS--SCCTTS-CGGGCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHHH--hcCCCC-chhhChHHHHHHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHHHHHHHHHhcC
Confidence 3444566676665422 124432 122356677889999999999999874 466889999999987777642223578
Q ss_pred C-----EEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccc-cChHHHHH
Q psy15216 1483 K-----HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVI-QPILEIGE 1556 (2602)
Q Consensus 1483 d-----~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~-~~l~~I~~ 1556 (2602)
| +|+++.+.|+++...+... |++++.++.++++.+|+++|+++++++|++|++++| |+||.+ .|+++|.+
T Consensus 152 d~~~r~~Vlv~~~~h~~~~~~~~~~---G~~vv~v~~~~~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~l~~i~~ 227 (474)
T 1wyu_B 152 EGRTRRVVLVPDSAHGSNPATASMA---GYQVREIPSGPEGEVDLEALKRELGPHVAALMLTNP-NTLGLFERRILEISR 227 (474)
T ss_dssp CTTTCCEEEEETTSCTHHHHHHHHT---TCEEEEECBCTTSSBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTTHHHHHH
T ss_pred CccCCCEEEEeCCcChhhHHHHHHC---CCEEEEecCCCCCCcCHHHHHHhhCCCceEEEEECC-CCCcccCCCHHHHHH
Confidence 7 9999999999988776554 999999999888999999999999999999999998 689998 69999999
Q ss_pred HhhhcCCEEEEecccccCcc-cccCCCCCccEEEEccccccC-CC-----ceEEEEEecCCCCcccccccc--CC-----
Q psy15216 1557 LCRSKGVIFHCDAAQAVGKI-DINIQNYKVDLMSFSAHKIYG-PK-----GIGALYIRRNPRTRIEAQIHG--GG----- 1622 (2602)
Q Consensus 1557 ia~~~gi~vivD~a~~~g~~-~~~l~~~~~D~~v~S~~K~~g-p~-----G~G~l~~~~~~~~~l~~~~~g--~~----- 1622 (2602)
+|++||+++|+|++|+.+.. ..+...+++|++++|+||.++ |. |+|++++++++++.+...+.+ +.
T Consensus 228 l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~ 307 (474)
T 1wyu_B 228 LCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLD 307 (474)
T ss_dssp HHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEE
T ss_pred HHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEec
Confidence 99999999999999976653 223334578999999999554 53 589999998877666521111 10
Q ss_pred --cc---ccCCCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe-
Q psy15216 1623 --HE---YGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN- 1695 (2602)
Q Consensus 1623 --~~---~~~~~gt~~~~~~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~- 1695 (2602)
.+ .++..++.+...+.+...++. +..+++++..++..++++++.+.|.+ . ++.+..+. .. .+...+.++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~-~~-~~~~~~~~~~ 383 (474)
T 1wyu_B 308 FDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKE-K-GYRVPYDG-PS-MHEFVAQPPE 383 (474)
T ss_dssp CCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCBCSSCS-SC-CSCEEEBCST
T ss_pred ccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c-CcEecCCC-Cc-ceEEEEEcCC
Confidence 00 123344555544444444454 33456778889999999999999988 4 66653221 11 121233332
Q ss_pred cCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1696 FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1696 ~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
..+..++...| +||.+ ++..+.. ...+++||+++.++|.+++++++++|++.
T Consensus 384 ~~~~~~l~~~L~~~Gi~~-~~~~~~~-----------------~~~~~lRis~~~~~t~e~id~~~~~L~~~ 437 (474)
T 1wyu_B 384 GFRALDLAKGLLELGFHP-PTVYFPL-----------------IVKEALMVEPTETEAKETLEAFAEAMGAL 437 (474)
T ss_dssp TCCHHHHHHHHHHTTCCC-CEESCST-----------------TSTTCEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCccc-ccccccc-----------------ccCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence 23456676666 67764 2322211 01378999999999999999999999974
No 236
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.88 E-value=2.2e-21 Score=254.06 Aligned_cols=305 Identities=12% Similarity=0.077 Sum_probs=217.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHH-HHhCCcEEEEecc
Q psy15216 40 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKP 118 (2602)
Q Consensus 40 ~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~ 118 (2602)
.+..+++++++++++|.+ ++++++|+++|++.++.++. ++||+|+++.++|+++...+.. ++..|++++.++.
T Consensus 55 ~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~al~~l~----~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 128 (412)
T 2cb1_A 55 DPTAKALEERLKALEGAL--EAVVLASGQAATFAALLALL----RPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP 128 (412)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTC----CTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS
T ss_pred ChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC
Confidence 356889999999999975 89999999999999999986 7999999999999998777765 4567999999985
Q ss_pred CCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccccccCCCCCccEEEecccc
Q psy15216 119 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 198 (2602)
Q Consensus 119 ~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K 198 (2602)
|+++|+++++++|++|++++++||||.+.|+++|.++|++||+++|+|++|+.+.........++|++++|+||
T Consensus 129 ------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K 202 (412)
T 2cb1_A 129 ------EPEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTK 202 (412)
T ss_dssp ------SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTT
T ss_pred ------CHHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcc
Confidence 38999999999999999999999999999999999999999999999999988732222234578999999999
Q ss_pred ccC-CCC-cEEEEEecCCCC-----ccc-ceecCCC---------cccccc------ccC-cchhHHHHHHHHHHHHHHh
Q psy15216 199 IYG-PKG-IGALYIRRNPRT-----RIE-AQIHGGG---------HEYGLR------SGT-LATHQIVGMGEAFRLARIE 254 (2602)
Q Consensus 199 ~~G-p~G-~G~l~~~~~~~~-----~l~-~~~~g~~---------~~~~~~------~gt-~~~~~~~al~~al~~~~~~ 254 (2602)
+++ |.+ +|++++.++... .+. |...++. ....++ .|. .+....+....++ +.
T Consensus 203 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l----~~ 278 (412)
T 2cb1_A 203 WASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGL----ET 278 (412)
T ss_dssp TTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHG----GG
T ss_pred cccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCC----ch
Confidence 765 544 688877663211 111 1111110 001111 111 1111111111222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCceEEe-CCCCC-------------CCCceEEEEEcccChhHHHHHh--CCeEEccc
Q psy15216 255 MKEELKRILFLQKRLYNGLMESIEEIYIN-GDMNN-------------RIPHNLNISFNFIEGESLLMAI--KDIAVSSG 318 (2602)
Q Consensus 255 ~~~~~~~~~~l~~~l~~~L~~~~~g~~l~-~~~~~-------------~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g 318 (2602)
+....++..++++++.+.|.+ .+++... .|... ..+.++.|.+ + +.+.+...+ .+|.+ .+
T Consensus 279 l~~~~~~~~~~~~~l~~~L~~-~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~-~~~~~~~~l~~~~i~~-~~ 354 (412)
T 2cb1_A 279 VALRVARMSETARFLAERLQG-HPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G-DLERASRFLGAIRLLK-AA 354 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-CTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S-SHHHHHHHHHHCSSEE-CS
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C-CHHHHHHHHHhCCeee-ec
Confidence 455566677888999999987 6787633 23211 2345566666 4 555555444 68888 77
Q ss_pred ---------ccCCCCCC--ChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 319 ---------SACTSASL--EPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 319 ---------~~~~~~~~--~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
.+|....+ .++..+..+|+. ++.||+|++.++++++++.++++|++
T Consensus 355 s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~----~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 355 NLGDARTLLVHPWTTTHSRLKEEARLQAGVT----PGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp CCSCSSCEEECTTTTTTTTSCHHHHHHTTCC----TTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred ccCCCcceeecCcccccccCCHHHHHhcCCC----CCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 35654322 255667778875 48999999999999999999999974
No 237
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.88 E-value=4.1e-22 Score=253.97 Aligned_cols=297 Identities=16% Similarity=0.109 Sum_probs=225.3
Q ss_pred CCCCCCC-CCCHHHHHHHHHHHhh--hcCCCCCCCcchhhhHHHHHHHHHHHHHHHhC---CCCCcEEEeCCHHHHHHHH
Q psy15216 1 MDYSATT-PIDPRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIEKARNEVAQLIY---ADPREIIWTSGATESNNLA 74 (2602)
Q Consensus 1 Ld~a~~~-~~p~~v~~a~~~~l~~--~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g---~~~~~Iv~t~g~T~al~~~ 74 (2602)
|+++.+. ++|+.+.+++.+.+.. ...++.. ...++|+.++++++ +++++|++++|+++|++++
T Consensus 24 l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-----------~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~ 92 (335)
T 1uu1_A 24 LALNENPFPFPEDLVDEVFRRLNSDALRIYYDS-----------PDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVM 92 (335)
T ss_dssp ESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCS-----------SCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC-----------chHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHH
Confidence 3555553 6789999999887732 2222221 25678999999999 8888999999999999999
Q ss_pred HHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCccccccc
Q psy15216 75 IKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP 154 (2602)
Q Consensus 75 ~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~ 154 (2602)
+.++ ||+|+++ |.|+++...++.. |++++.++.++++.+|++++ +++++|++++|+||||.++|
T Consensus 93 ~~~~-------gd~Vl~~-p~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~ 156 (335)
T 1uu1_A 93 MLMF-------DRSVFFP-PTYSCYRIFAKAV---GAKFLEVPLTKDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFE 156 (335)
T ss_dssp HHHS-------SEEEECS-SSCHHHHHHHHHH---TCEEEECCCCTTSCCCCCCC-----CTTEEEEEESSCTTTCCCCC
T ss_pred HHHh-------CCcEEEC-CCcHHHHHHHHHc---CCeEEEeccCCCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCC
Confidence 9876 7999999 9999987766655 99999999877777888877 68999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecccccccc--ccc-CCCCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccc
Q psy15216 155 ILEIGELCRSKGVIFHCDAAQAVGKI--DIN-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEY 229 (2602)
Q Consensus 155 l~~I~~la~~~g~~livD~a~a~g~~--~~d-l~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~ 229 (2602)
.+++.++++..| ++|+|++|+.... .++ +...+.++++.|+||.+|++| +||+++++++++.+.+..
T Consensus 157 ~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~------- 228 (335)
T 1uu1_A 157 REEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVR------- 228 (335)
T ss_dssp HHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHS-------
T ss_pred HHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhc-------
Confidence 999999999888 9999999973211 122 233456799999999999888 799999887766665432
Q ss_pred cccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHH
Q psy15216 230 GLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMA 309 (2602)
Q Consensus 230 ~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (2602)
..++++.+...++.++|+. ..++++..++++++++++.+.|.+ . ++.+. ++. ..++.+.++..+..++...
T Consensus 229 --~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~---~~~~~~~~~~~~~~~~~~~ 299 (335)
T 1uu1_A 229 --LPFNVSYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALRE-M-GYRIT-DSR---GNFVFVFMEKEEKERLLEH 299 (335)
T ss_dssp --CTTCSCHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHH-H-TCCBC-CCC---SSEEEEECCTHHHHHHHHH
T ss_pred --CCCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CcEEc-CCC---CeEEEEECCCCCHHHHHHH
Confidence 1236777777777777774 345778888899999999999987 3 55543 221 2233444443234556666
Q ss_pred h--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 310 I--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 310 L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
| +||.++++ .+++|+|++ +.+|+++++++|++
T Consensus 300 l~~~gi~v~~~------------------------~~~iRis~~---~~~~i~~~~~~l~~ 333 (335)
T 1uu1_A 300 LRTKNVAVRSF------------------------REGVRITIG---KREENDMILRELEV 333 (335)
T ss_dssp HHHHTEEEEEE------------------------TTEEEEECC---CHHHHHHHHHHHHC
T ss_pred HHHCCEEEEEC------------------------CCeEEEEeC---CHHHHHHHHHHHHh
Confidence 6 69998861 278999997 57899999999985
No 238
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.88 E-value=1.3e-22 Score=263.36 Aligned_cols=306 Identities=14% Similarity=0.129 Sum_probs=218.5
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHH-HHHhCCc
Q psy15216 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDGF 111 (2602)
Q Consensus 33 ~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~-~~~~~G~ 111 (2602)
|.++....+..+++|+++|+++|.+ +.++++|+|+|+++++. +. ++||+|+++.++|++....+. .++..|+
T Consensus 47 ~~~~~~~~~~~~~lr~~la~~~g~~--~~i~~~sGt~a~~~al~-~~----~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~ 119 (393)
T 1n8p_A 47 YEYSRSQNPNRENLERAVAALENAQ--YGLAFSSGSATTATILQ-SL----PQGSHAVSIGDVYGGTHRYFTKVANAHGV 119 (393)
T ss_dssp CCBTTTCCHHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHH-TS----CSSCEEEEESSCCHHHHHHHHHTSTTTCS
T ss_pred cceecCCChhHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHH-Hc----CCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence 4455545567899999999999986 45556666999999999 66 799999999999998766654 3456799
Q ss_pred EEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhc----CCEEEEecccccccccccCCCC
Q psy15216 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK----GVIFHCDAAQAVGKIDINIQNY 187 (2602)
Q Consensus 112 ~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~----g~~livD~a~a~g~~~~dl~~~ 187 (2602)
++++++.+ | ++|+++++++|++|++++|+||||.++|+++|.++|++| |+++|+|++|+.+... +...+
T Consensus 120 ~v~~v~~~-----d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~~~ 192 (393)
T 1n8p_A 120 ETSFTNDL-----L-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPLNF 192 (393)
T ss_dssp CCEEESSH-----H-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGGGG
T ss_pred EEEEeCCC-----h-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHHHc
Confidence 99999865 7 899999999999999999999999999999999999999 9999999999877643 44456
Q ss_pred CccEEEeccccccCCCC--c-EEEEEe-cCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHH
Q psy15216 188 KVDLMSFSAHKIYGPKG--I-GALYIR-RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRIL 263 (2602)
Q Consensus 188 ~~D~~~~S~~K~~Gp~G--~-G~l~~~-~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~ 263 (2602)
++|++++|+||++|++| + |+++++ +++++.+.+... ...++++....+++..+++. +....++..
T Consensus 193 ~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~-------~~g~~~~~~~~~~~~~~l~~----~~~~~~~~~ 261 (393)
T 1n8p_A 193 GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQN-------AIGAIPSPFDAWLTHRGLKT----LHLRVRQAA 261 (393)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHH-------HHCCCCCHHHHHHHHHHHTT----HHHHHHHHH
T ss_pred CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHH-------hcCCCCCHHHHHHHHhccch----HHHHHHHHH
Confidence 79999999999999988 6 999985 555555543321 01123333333333344432 344455556
Q ss_pred HHHHHHHHHHhhccCc-eE-EeCCC--C-----------CC-C-CceEEEEEccc--ChhHHHHHh--CCeEEcccccCC
Q psy15216 264 FLQKRLYNGLMESIEE-IY-INGDM--N-----------NR-I-PHNLNISFNFI--EGESLLMAI--KDIAVSSGSACT 322 (2602)
Q Consensus 264 ~l~~~l~~~L~~~~~g-~~-l~~~~--~-----------~~-~-~~~~~~~~~~~--~~~~~~~~L--~gI~v~~g~~~~ 322 (2602)
+++..+.+.|.+ .+. +. +.-+. . .. . +.++.|.+++. +...++..+ .++.++.|..|+
T Consensus 262 ~~~~~l~~~L~~-~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s 340 (393)
T 1n8p_A 262 LSANKIAEFLAA-DKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIES 340 (393)
T ss_dssp HHHHHHHHHHTS-CTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSC
T ss_pred HHHHHHHHHHHh-CCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcc
Confidence 666777777766 444 43 21110 0 00 2 45666777642 345666666 466777787665
Q ss_pred CCCC--ChHH------HHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 323 SASL--EPSY------VLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 323 ~~~~--~~~~------~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
.... .+++ .+..+|++ ++.||+|++.++++++++.+.++|++
T Consensus 341 ~~~~p~~~~h~~~~~~~~~~~g~~----~~~iRlS~g~~~~~~~i~~l~~al~~ 390 (393)
T 1n8p_A 341 LLEVPAVMTHGGIPKEAREASGVF----DDLVRISVGIEDTDDLLEDIKQALKQ 390 (393)
T ss_dssp EEECTTTTTSCSSCTTTTTTTSCC----TTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred eeeccccccccccCHHHHHhcCCC----CCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 3211 1111 23455654 48999999999999999999999985
No 239
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.88 E-value=1.2e-22 Score=266.65 Aligned_cols=336 Identities=17% Similarity=0.154 Sum_probs=241.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhc--CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcc
Q psy15216 2 DYSATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAA 79 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~~~~--~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~ 79 (2602)
|+++.+|.|+.+.+++.+.+...+ ++|....+........+.+.+|+++++++|++++.+++++ +|+|+.+++.++.
T Consensus 28 ~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~s-Gt~a~~~a~~~~~ 106 (405)
T 2vi8_A 28 LIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHS-GAQANMAVYFTVL 106 (405)
T ss_dssp CCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSS-HHHHHHHHHHHHC
T ss_pred eccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecC-cHHHHHHHHHHhc
Confidence 567777889999999998875322 2333211111123344555688999999998754444454 5999999999987
Q ss_pred cccccCCCEEEEcCCCCcccHHHH---HHHHhCCcEEEEeccC-CCCccChHHHHhhccC-CceEEEEecccCccccccc
Q psy15216 80 HFYKKRGKHIITVQTEHKSVLDSI---RKLENDGFRVTYLKPK-NNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQP 154 (2602)
Q Consensus 80 ~~~~~~gd~Vlv~~~~~~s~~~~~---~~~~~~G~~v~~v~~~-~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~ 154 (2602)
++||+|+++.++|+++...+ ... ..+.+++.++++ .++.+|+++|++++++ ++++|+++ ++| .|...|
T Consensus 107 ----~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~-~~~-~~~~~~ 179 (405)
T 2vi8_A 107 ----EHGDTVLGMNLSHGGHLTHGSPVNFS-GVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAA-AAA-YPRIID 179 (405)
T ss_dssp ----CTTCEEEEECGGGTCCTTTTCTTSHH-HHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEEC-CSS-CCSCCC
T ss_pred ----CCCCEEEEecccccchhcccchhhhc-cceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEEe-CCC-CCccCC
Confidence 79999999999999985421 122 113478888775 4678999999999986 88888874 444 467779
Q ss_pred HHHHHHHHHhcCCEEEEecccccccccccCCCC---CccEEEeccccccC-CCCcEEEEEecCCCCcccceecCCCcccc
Q psy15216 155 ILEIGELCRSKGVIFHCDAAQAVGKIDINIQNY---KVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGHEYG 230 (2602)
Q Consensus 155 l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~---~~D~~~~S~~K~~G-p~G~G~l~~~~~~~~~l~~~~~g~~~~~~ 230 (2602)
+++|.++|++||+++|+|++|+.+..+.+.... .+|++++|+||++| |.| |++++++++++.+.+....
T Consensus 180 l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~~l~~~~~~------ 252 (405)
T 2vi8_A 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG-GMILCQEQFAKQIDKAIFP------ 252 (405)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC-EEEEECHHHHHHHHHHHTT------
T ss_pred HHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC-eEEEEcHHHHHHHHhhhcc------
Confidence 999999999999999999999876443332222 57899999999765 888 9999998776666544321
Q ss_pred ccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--cChhHHH
Q psy15216 231 LRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESLL 307 (2602)
Q Consensus 231 ~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~--~~~~~~~ 307 (2602)
+..++++..+++++.++++... .++++..++..++++++.+.|.+ . |+.+..+.. ....+.+.++. .+...+.
T Consensus 253 ~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 328 (405)
T 2vi8_A 253 GIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQN-E-GFTLVSGGT--DNHLLLVDLRPQQLTGKTAE 328 (405)
T ss_dssp TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEGGGSC--SSSEEEEECGGGTCCHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCC--CceEEEEEccCCCCCHHHHH
Confidence 2346777888888878888654 57789999999999999999988 4 888875432 23455566653 3556666
Q ss_pred HHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCC----CCCHHHHHHHHHHHHhh
Q psy15216 308 MAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR----FTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 308 ~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~----~~t~edid~li~~L~~~ 369 (2602)
..| +||.+++|..+... .+ ....+++|++++. ..+++|+++++++|++.
T Consensus 329 ~~l~~~gi~v~~g~~~~~~----------~~---~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 383 (405)
T 2vi8_A 329 KVLDEVGITVNKNTIPYDP----------ES---PFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLV 383 (405)
T ss_dssp HHHHHHTEECEEECCTTCS----------SC---TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCceeccCcCcccc----------CC---CCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHH
Confidence 666 69999988642100 00 0113689999986 46799999999999874
No 240
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.88 E-value=4e-22 Score=260.86 Aligned_cols=314 Identities=13% Similarity=0.071 Sum_probs=233.2
Q ss_pred CCCHHHHHHHHHHHhh--ccCCCCCccchhHHHHHHHHHHHHHHHHHHh----CCC--C-CcEEEeCCHHHHHHHHHHhh
Q psy15216 1404 PIDPRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YAD--P-REIIWTSGATESNNLAIKGA 1474 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~--~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g~~--~-~~iv~t~gaT~al~~al~~l 1474 (2602)
..++.+.+++.+.++. ...++.. ....++|+++++++ |.+ + ++|++|+|+++|+..++.++
T Consensus 60 ~~~~~v~~a~~~~~~~~~~~~y~~~----------~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l 129 (404)
T 2o1b_A 60 PTPQGIIDHFQKALTIPENQKYGAF----------HGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCV 129 (404)
T ss_dssp CCCHHHHHHHHHHTTCHHHHSCCCT----------TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCCC----------CCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHh
Confidence 4578899999888743 2223321 11356777777776 864 4 78999999999999999998
Q ss_pred hhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHhhccCCceEEEEeccccccccccC---
Q psy15216 1475 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP--- 1550 (2602)
Q Consensus 1475 ~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~--- 1550 (2602)
. ++||+|+++.|+|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+||||.++|
T Consensus 130 ~----~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 202 (404)
T 2o1b_A 130 I----NPGDYVLLPDPGYTDYLAGVLLA---DGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEV 202 (404)
T ss_dssp C----CTTCEEEEEESCCSSHHHHHHHT---TCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHH
T ss_pred c----CCCCEEEEcCCCchhHHHHHHHC---CCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHH
Confidence 6 79999999999999988766554 99999999876 4458999999999888999999999999999997
Q ss_pred hHHHHHHhhhcCCEEEEecccccCcc---cccCCCC----CccEEEEccccccCCCc--eEEEEEecCCCCccccccccC
Q psy15216 1551 ILEIGELCRSKGVIFHCDAAQAVGKI---DINIQNY----KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 1621 (2602)
Q Consensus 1551 l~~I~~ia~~~gi~vivD~a~~~g~~---~~~l~~~----~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~ 1621 (2602)
+++|.++|++||+++|+|++|+.... +.++..+ +.++++.|+||.+|++| +||+++++++++.+......
T Consensus 203 l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~- 281 (404)
T 2o1b_A 203 FDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTH- 281 (404)
T ss_dssp HHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhh-
Confidence 77899999999999999999976431 2222222 45789999999888777 79999988776665543211
Q ss_pred CccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe-cCCcH
Q psy15216 1622 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGE 1700 (2602)
Q Consensus 1622 ~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~-~~~~~ 1700 (2602)
..++.+...+.++.++|+....++++.++++.++++++.+.|.+ . ++.+..+.. +....+.++ ..+..
T Consensus 282 ------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---g~~~~~~~~~~~~~~ 350 (404)
T 2o1b_A 282 ------TNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAK-A-DLPFVHAKG---GIYVWLETPPGYDSE 350 (404)
T ss_dssp ------HCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCEECCCB---SSEEEEECCTTCCHH
T ss_pred ------ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-c-CCeecCCCc---ceEEEEeCCCCCCHH
Confidence 12356666666676777643456788888899999999999987 3 666553321 122334444 23445
Q ss_pred HHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1701 SLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1701 ~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
++...| +||.+++|..|... ..+++||+++. +.+++++++++|++.
T Consensus 351 ~l~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRis~~~--~~e~l~~~l~~l~~~ 399 (404)
T 2o1b_A 351 QFEQFLVQEKSILVAPGKPFGEN-----------------GNRYVRISLAL--DDQKLDEAAIRLTEL 399 (404)
T ss_dssp HHHHHHHHHHCEECEESGGGCGG-----------------GTTEEEEECCS--CTTHHHHHHHHHHGG
T ss_pred HHHHHHHHHCCEEEeCchhhCcC-----------------CCCeEEEEEcC--CHHHHHHHHHHHHHH
Confidence 666554 59999998877431 13789999985 678999999999863
No 241
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.88 E-value=6.5e-23 Score=265.90 Aligned_cols=328 Identities=14% Similarity=0.138 Sum_probs=227.5
Q ss_pred HHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEc
Q psy15216 1409 VVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITV 1488 (2602)
Q Consensus 1409 v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~ 1488 (2602)
+.+++.+.+...+..+. ....++|+.++++++.+ ++++++|+|+|+..++.++. +++||+|+++
T Consensus 21 ~~~~~~~~~~~~~~~~~-----------~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~~~~~~---~~~gd~v~~~ 84 (374)
T 3uwc_A 21 YLNDLREFIKTADFTLG-----------AELEKFEKRFAALHNAP--HAIGVGTGTDALAMSFKMLN---IGAGDEVITC 84 (374)
T ss_dssp HHHHHHHHHHHTCCSSC-----------HHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTT---CCTTCEEEEE
T ss_pred HHHHHHHHHHcCCcccC-----------hhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcC---CCCCCEEEEC
Confidence 78888887765322221 34688999999999976 88999999999999999982 2899999999
Q ss_pred CCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEe
Q psy15216 1489 QTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCD 1568 (2602)
Q Consensus 1489 ~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD 1568 (2602)
.++|+++...+... |++++.++.+.++.+|++++++++++++++|+ ++||||.+.|+++|.++|++||+++|+|
T Consensus 85 ~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D 158 (374)
T 3uwc_A 85 ANTFIASVGAIVQA---GATPVLVDSENGYVIDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVED 158 (374)
T ss_dssp SSSCHHHHHHHHHT---TCEEEEECBCTTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CCccHHHHHHHHHc---CCEEEEEecCCCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEe
Confidence 99999987766544 99999999987788999999999999998887 7889999999999999999999999999
Q ss_pred cccccCcccccCCCCC--ccEEEEccc--cccCCCc-eEEEEEecC-CCCccccccccCCccccCCC--CCcchhHHHHH
Q psy15216 1569 AAQAVGKIDINIQNYK--VDLMSFSAH--KIYGPKG-IGALYIRRN-PRTRIEAQIHGGGHEYGLRS--GTLATHQIVGM 1640 (2602)
Q Consensus 1569 ~a~~~g~~~~~l~~~~--~D~~v~S~~--K~~gp~G-~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~--gt~~~~~~~al 1640 (2602)
++|+.|.. ++....+ .|++++|+| |++|+.| .|+++.+++ +.+.+.+...++.. ..+.. .+.+. .+.++
T Consensus 159 ~~~~~g~~-~~~~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~ 235 (374)
T 3uwc_A 159 ACQTILGR-INDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLI-NRDVCVEYGINC-RMDTI 235 (374)
T ss_dssp CTTCTTCE-ETTEETTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEE-ETTEESSCCCBC-BCCHH
T ss_pred CCCccCce-eCCeeccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCcc-ccCccccccccC-CCCHH
Confidence 99998764 3333333 699999988 9777644 677777653 33334433322211 11111 11111 11222
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCc-EEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccc
Q psy15216 1641 GEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEE-IYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSA 1716 (2602)
Q Consensus 1641 ~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g-l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~ 1716 (2602)
.+++.. ....+++..++..++.+++.+.|.+ .++ +.+...+....+....+.+...+...+...| +||.++++..
T Consensus 236 ~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~ 314 (374)
T 3uwc_A 236 QAVIANRLMNQLETITEKRRGIAHLYDQSFVD-LSEFIDVPVRREGVYHVFHIYVLRVKYRDQLFQYLKDNGIEVKIHYP 314 (374)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGG-GTTTEECCCCCTTEECCCSSEEEEETTHHHHHHHHHHTTBCCBCSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeEEeccCCCCCceeeEEEEEEcCCHHHHHHHHHHCCCccccCCC
Confidence 233332 2234677888889999999999987 666 7765433322222223333444666777666 7999887752
Q ss_pred cCCCCCChhHHHHHcCCC-------ccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1717 CTSASLEPSYVLRALGCN-------DELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1717 ~~~~~~~~~~~~~~~~~~-------~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
... +..+.+ ..++.. .....+.+|++++.++|.+||++++++|++.
T Consensus 315 ~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 367 (374)
T 3uwc_A 315 IAM-HLQPAA--KSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREF 367 (374)
T ss_dssp SCG-GGSGGG--GGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred Ccc-ccChhh--hhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 110 011111 111111 1112368999999999999999999999974
No 242
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.88 E-value=3.6e-22 Score=259.27 Aligned_cols=301 Identities=13% Similarity=0.082 Sum_probs=215.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHH-HHhCCcEEEEecc
Q psy15216 1436 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKP 1514 (2602)
Q Consensus 1436 ~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~ 1514 (2602)
....+++|+.+++++|.+ ++++++|+++|+++++.++. ++||+|+++.+.|+++...+.. ++..|+++++++.
T Consensus 81 ~p~~~~le~~lA~l~g~~--~~i~~ssGt~Ai~~al~~l~----~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 154 (415)
T 2fq6_A 81 TLTHFSLQQAMCELEGGA--GCVLFPCGAAAVANSILAFI----EQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP 154 (415)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTC----CTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred CchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHh----CCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC
Confidence 346788999999999975 56777899999999999886 7999999999999998877743 3556999999975
Q ss_pred CCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhh--cCCEEEEecccccCcccccCCCCCccEEEEcc
Q psy15216 1515 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS--KGVIFHCDAAQAVGKIDINIQNYKVDLMSFSA 1592 (2602)
Q Consensus 1515 ~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~--~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~ 1592 (2602)
+ |+++|+++|+++|++|++++++||+|.++|+++|+++|++ ||+++++|++|+.+....++ ++++|++++|+
T Consensus 155 ~-----d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~-~~g~Div~~S~ 228 (415)
T 2fq6_A 155 L-----IGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL-DFGIDVSIQAA 228 (415)
T ss_dssp T-----CGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG-GGTCSEEEEET
T ss_pred C-----CHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcc-ccCCeEEEEeC
Confidence 4 8999999999999999999999999999999999999999 99999999999866432222 46799999999
Q ss_pred ccccCCCc---eEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 1593 HKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGL 1669 (2602)
Q Consensus 1593 ~K~~gp~G---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L 1669 (2602)
||++|++| .|+++.++++++.+..... ...++.+....+.+..+++. +....++..+++..+.+.|
T Consensus 229 sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~-------~~G~~~~~~~a~~~~~~l~~----l~~r~~~~~~n~~~l~~~L 297 (415)
T 2fq6_A 229 TKYLVGHSDAMIGTAVCNARCWEQLRENAY-------LMGQMVDADTAYITSRGLRT----LGVRLRQHHESSLKVAEWL 297 (415)
T ss_dssp TTTTTCSSSCCCEEEEECTTTHHHHHHHHH-------HTTCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCceEEEEEeCHHHHHHHHHHHH-------hcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHHHHHHHHH
Confidence 99888776 6999998765554443211 01122232222222233332 3445555666777777888
Q ss_pred hhcCCcEEEe-CCC--C-----------CCCCceEEEEEecC----CcHHHHHhc--CCEEEccccccCCCCC-ChhHH-
Q psy15216 1670 MESIEEIYIN-GDM--N-----------NRIPHNLNISFNFI----EGESLLMAI--KDIAVSSGSACTSASL-EPSYV- 1727 (2602)
Q Consensus 1670 ~~~~~gl~i~-~~~--~-----------~~~~~~~~~~~~~~----~~~~~~~~L--~gI~v~~g~~~~~~~~-~~~~~- 1727 (2602)
.+ .|.+.-. -+. . ...+.+..|.+++. +...++..| .++.++.|+.|..... .|...
T Consensus 298 ~~-~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s 376 (415)
T 2fq6_A 298 AE-HPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIA 376 (415)
T ss_dssp HT-CTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHH
T ss_pred Hc-CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccc
Confidence 76 4555321 111 0 12355666776642 334556555 5678888877754311 01111
Q ss_pred --HH--HcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1728 --LR--ALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1728 --~~--~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.. .+|.. .+.||||++.++++++++.+.++|++
T Consensus 377 ~~~~~~~~g~~----~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 377 AIRPQGEIDFS----GTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp TTCTTCCCCCC----SCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred cccchhhcCCC----CCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 11 23433 48999999999999999999999974
No 243
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.88 E-value=1.1e-21 Score=259.22 Aligned_cols=318 Identities=14% Similarity=0.129 Sum_probs=233.8
Q ss_pred CCCHHHHHHHHHHHhhc----cCCCCCccchhHHHHHHHHHHHHHHHHHH----hC--CCCC-cEEEeCCHHHHHHHHHH
Q psy15216 1404 PIDPRVVDKMIPYLRVQ----FGNPASRNHIYGWTAEKAIEKARNEVAQL----IY--ADPR-EIIWTSGATESNNLAIK 1472 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~----~~np~~~~~~~~~~~~~~~~~lr~~ia~~----~g--~~~~-~iv~t~gaT~al~~al~ 1472 (2602)
+.++.+.+++.+.++.. ..++.. ....++|++++++ +| ++++ +|++|+|+++|+..++.
T Consensus 50 ~~~~~v~~a~~~~~~~~~~~~~~y~~~----------~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~ 119 (429)
T 1yiz_A 50 HAPKYALNALAAAANSPDPLANQYTRG----------FGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQ 119 (429)
T ss_dssp CCCHHHHHHHHHHHTCSCGGGGSCCCS----------SCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhccccCccCCCCC----------CCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHH
Confidence 46788999999988641 222221 0123455555555 47 4678 99999999999999999
Q ss_pred hhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC----------CCCcChhHHHhhccCCceEEEEeccc
Q psy15216 1473 GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN----------NGLITLSQLEEKICSDTILVSVMLVN 1542 (2602)
Q Consensus 1473 ~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~----------~~~id~d~l~~~i~~~t~lv~l~~~~ 1542 (2602)
++. ++||+|+++.|.|+++...+... |++++.++.++ ++.+|+++|++++++++++|++++|+
T Consensus 120 ~~~----~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~ 192 (429)
T 1yiz_A 120 GHV----DEGDEVIIIEPFFDCYEPMVKAA---GGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPH 192 (429)
T ss_dssp HHC----CTTCEEEEEESCCTTHHHHHHHT---TCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSC
T ss_pred Hhc----CCCCEEEEcCCCchhHHHHHHHc---CCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCC
Confidence 986 79999999999999987766544 99999998865 35689999999999999999999999
Q ss_pred cccccccC---hHHHHHHhhhcCCEEEEecccccCc------ccc-cCC-CCCccEEEEccccccCCCc--eEEEEEecC
Q psy15216 1543 NEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGK------IDI-NIQ-NYKVDLMSFSAHKIYGPKG--IGALYIRRN 1609 (2602)
Q Consensus 1543 n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~------~~~-~l~-~~~~D~~v~S~~K~~gp~G--~G~l~~~~~ 1609 (2602)
||||.++| +++|.++|++||+++|+|++|+... .++ .+. ..+.++++.|+||.+|++| +|+++++++
T Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~ 272 (429)
T 1yiz_A 193 NPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEA 272 (429)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHH
T ss_pred CCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHH
Confidence 99999997 8899999999999999999987421 122 222 3468999999999888888 899999887
Q ss_pred CCCccccccccCCccccCCCCCcchhHHHHHHHHHHH-----H--HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC
Q psy15216 1610 PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-----A--RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDM 1682 (2602)
Q Consensus 1610 ~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~-----~--~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~ 1682 (2602)
+++.+.... ....++.+.+.+.++.++|+. . ...+++.++++.++++++.+.|.+ . ++.+..+.
T Consensus 273 ~~~~l~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~ 343 (429)
T 1yiz_A 273 LLKNLQMVH-------QNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAE-V-GMNPTVPQ 343 (429)
T ss_dssp HHHHHHHHH-------HTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHH-H-TCEEEECS
T ss_pred HHHHHHHHH-------hhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHh-C-CCcccCCC
Confidence 666554332 112345666666677777775 3 345788888999999999999987 3 66665332
Q ss_pred CCCCCceEEEEEecC-------------CcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEec
Q psy15216 1683 NNRIPHNLNISFNFI-------------EGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI 1746 (2602)
Q Consensus 1683 ~~~~~~~~~~~~~~~-------------~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~ 1746 (2602)
. .....+.++.. +..++...| +||.+++|..|.... ..+ ...+++||++
T Consensus 344 ~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~--------~~~----~~~~~iRis~ 408 (429)
T 1yiz_A 344 G---GYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEP--------NKH----LGEDFVRYCF 408 (429)
T ss_dssp B---SSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGG--------GGG----GTTTEEEEEC
T ss_pred c---ceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCc--------ccC----CCCCeEEEEe
Confidence 2 22334444432 234555544 799999987765320 000 0137999999
Q ss_pred CCCCCHHHHHHHHHHHHH
Q psy15216 1747 GRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1747 ~~~~t~edid~li~~L~~ 1764 (2602)
+ ++.+++++++++|++
T Consensus 409 ~--~~~e~i~~~l~~l~~ 424 (429)
T 1yiz_A 409 F--KKDENLQKAAEILRK 424 (429)
T ss_dssp C--SCHHHHHHHHHHHHH
T ss_pred c--CCHHHHHHHHHHHHH
Confidence 8 489999999999986
No 244
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.88 E-value=1.8e-22 Score=263.82 Aligned_cols=316 Identities=13% Similarity=0.139 Sum_probs=232.2
Q ss_pred CCHHHHHHHHHHHhhc----cCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhcc
Q psy15216 1405 IDPRVVDKMIPYLRVQ----FGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK 1480 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~----~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~ 1480 (2602)
.++.+.+++.+.++.. ..++.. ....++|+++++++|+++++|++|+|+++|+..++.++. +
T Consensus 48 ~~~~v~~a~~~~~~~~~~~~~~y~~~----------~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~----~ 113 (397)
T 2zyj_A 48 PKEEAAEAAARILREKGEVALQYSPT----------EGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFL----D 113 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCCT----------TCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHC----C
T ss_pred CHHHHHHHHHHHHHhcchhhhCCCCC----------CCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhC----C
Confidence 4567888888877642 223221 124678999999999888899999999999999999986 7
Q ss_pred CCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEE-EEeccccccccccChH---HHH
Q psy15216 1481 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILV-SVMLVNNEIGVIQPIL---EIG 1555 (2602)
Q Consensus 1481 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv-~l~~~~n~tG~~~~l~---~I~ 1555 (2602)
+||+|+++.|+|+++...+.. .|++++.++.++++ +|+++|++++++ ++++| ++++++||||.++|.+ +|.
T Consensus 114 ~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~ 189 (397)
T 2zyj_A 114 EGSPVLLEAPSYMGAIQAFRL---QGPRFLTVPAGEEG-PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLL 189 (397)
T ss_dssp TTCEEEEEESCCHHHHHHHHT---TCCEEEEEEEETTE-ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHH---cCCEEEecCcCCCC-CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHH
Confidence 999999999999987766544 49999999887655 899999999986 88887 5799999999999854 899
Q ss_pred HHhhhcCCEEEEecccccCcc----cccCCCCCc------cEEEEccccccCCCc--eEEEEEecCCCCccccccccCCc
Q psy15216 1556 ELCRSKGVIFHCDAAQAVGKI----DINIQNYKV------DLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGH 1623 (2602)
Q Consensus 1556 ~ia~~~gi~vivD~a~~~g~~----~~~l~~~~~------D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~ 1623 (2602)
++|++||+++|+|++|+.+.. +.++..++. .+++.|+||.+| +| +||+++++++++.+.....+
T Consensus 190 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~--- 265 (397)
T 2zyj_A 190 QMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQG--- 265 (397)
T ss_dssp HHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHHHHHHHHH---
T ss_pred HHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHHHHHHHHHHHh---
Confidence 999999999999999986432 222322322 388899999888 56 79999987766655433211
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCC-cEEEeCCCCCCCCceEEEEEe-cCCcH
Q psy15216 1624 EYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIE-EIYINGDMNNRIPHNLNISFN-FIEGE 1700 (2602)
Q Consensus 1624 ~~~~~~gt~~~~~~~al~~aL~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~-gl~i~~~~~~~~~~~~~~~~~-~~~~~ 1700 (2602)
+..++ +...+.++.++|+... ..+++..+++.++++++.+.|.+.++ ++.+..+.. .....+.++ ..+..
T Consensus 266 ---~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~---g~~~~~~~~~~~~~~ 338 (397)
T 2zyj_A 266 ---ADLHT-PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKG---GMFVWMELPKGLSAE 338 (397)
T ss_dssp ---HHSSC-CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSB---SSEEEEECSTTCCHH
T ss_pred ---hcCCC-CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCc---cEEEEEEcCCCCCHH
Confidence 11233 5555556666666321 45777888888999999999987456 577653322 223334444 23456
Q ss_pred HHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1701 SLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1701 ~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
++...| +||.+++|..|... ....+++||+++.. +.+++++++++|++.
T Consensus 339 ~~~~~l~~~gi~v~~g~~f~~~---------------~~~~~~iRis~~~~-~~~~i~~~~~~l~~~ 389 (397)
T 2zyj_A 339 GLFRRALEENVAFVPGGPFFAN---------------GGGENTLRLSYATL-DREGIAEGVRRLGRA 389 (397)
T ss_dssp HHHHHHHHTTEEEEESGGGCTT---------------SCCTTEEEEECSSS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEechHHhcCC---------------CCCCCeEEEEcCCC-CHHHHHHHHHHHHHH
Confidence 676666 89999999877532 01137899999875 899999999999874
No 245
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.88 E-value=1.9e-21 Score=260.65 Aligned_cols=329 Identities=13% Similarity=0.104 Sum_probs=231.8
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCC---------CcEEEeCCHHHHHHHHHHhhh
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP---------REIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~---------~~iv~t~gaT~al~~al~~l~ 1475 (2602)
.+..+.+++..++ |+....|..+.....+..++++++++++|++. ..+++|+|+|+|+..++.++.
T Consensus 86 ~~~~~~~~~~~~~-----n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~ 160 (486)
T 1js3_A 86 YPAMLADMLCGAI-----GCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR 160 (486)
T ss_dssp HHHHHHHHHHHHH-----CCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHH
Confidence 3445666666665 33333455566677788899999999999864 358999999999999998875
Q ss_pred hhhcc-----CCC----------EEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCce------
Q psy15216 1476 HFYKK-----RGK----------HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTI------ 1534 (2602)
Q Consensus 1476 ~~~~~-----~gd----------~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~------ 1534 (2602)
...++ .|| .|+++.++|+++...+..+ |++++.++++.++.+|+++|+++|+++++
T Consensus 161 ~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~---G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~ 237 (486)
T 1js3_A 161 TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIG---GVKLKAIPSDGKFAMRASALQEALERDKAAGLIPF 237 (486)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHH---TCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhC---CCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCce
Confidence 32111 032 3888999999998888777 99999999988899999999999987764
Q ss_pred EEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCccccc-CCC-----CCccEEEEcccccc-CCCceEEEEEe
Q psy15216 1535 LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN-IQN-----YKVDLMSFSAHKIY-GPKGIGALYIR 1607 (2602)
Q Consensus 1535 lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~-l~~-----~~~D~~v~S~~K~~-gp~G~G~l~~~ 1607 (2602)
+|++++++|+||.+.|+++|+++|++||+|+|+|+||+.+....+ ... .++|++++++||++ +|.|+|+++++
T Consensus 238 ~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~ 317 (486)
T 1js3_A 238 FVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVK 317 (486)
T ss_dssp EEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEES
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEe
Confidence 999999999999999999999999999999999999987764332 211 25899999999954 57889999998
Q ss_pred cCC--CCccc--cccc-cCCc-----cc--cCC-CCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy15216 1608 RNP--RTRIE--AQIH-GGGH-----EY--GLR-SGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESI 1673 (2602)
Q Consensus 1608 ~~~--~~~l~--~~~~-g~~~-----~~--~~~-~gt~~~~~~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~ 1673 (2602)
++. .+.+. +.+. +... .. .+. .++... ...++.+++. +...+++++.++..++++++.+.|.+ .
T Consensus 318 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~-~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~ 395 (486)
T 1js3_A 318 RRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRF-RSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQ-D 395 (486)
T ss_dssp CHHHHHGGGC------------CCSCCCGGGSSSCSCCCC-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C
T ss_pred CHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCch-hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 642 23221 1111 1110 00 000 111111 2345556666 34567889999999999999999988 7
Q ss_pred CcEEEeCCCCCCCCceEEEEEecCC--cHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEec-CC
Q psy15216 1674 EEIYINGDMNNRIPHNLNISFNFIE--GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GR 1748 (2602)
Q Consensus 1674 ~gl~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~-~~ 1748 (2602)
+++.+..++. .....|.++..+ ..++...| +|+.+..+..+. ..+++|+++ ++
T Consensus 396 ~~~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-------------------~~~~lRi~~~~~ 453 (486)
T 1js3_A 396 PRFEVCAEVT---LGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLR-------------------GQFVLRFAICSR 453 (486)
T ss_dssp TTEEECSCCC---SSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEET-------------------TEEEEEEECCCT
T ss_pred CCeEEeCCCc---eeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEEC-------------------CEEEEEEEeCCC
Confidence 8999876432 345555554321 34555555 454322221111 126899996 66
Q ss_pred CCCHHHHHHHHHHHHHh
Q psy15216 1749 FTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1749 ~~t~edid~li~~L~~~ 1765 (2602)
++|.+||+++++.|++.
T Consensus 454 ~~t~~di~~~~~~l~~~ 470 (486)
T 1js3_A 454 KVESGHVRLAWEHIRGL 470 (486)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 78999999999999873
No 246
>3lvl_A NIFU-like protein; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 3.00A {Escherichia coli} PDB: 2l4x_A 2kqk_A 1q48_A 1r9p_A 1wfz_A
Probab=99.88 E-value=2.7e-23 Score=217.06 Aligned_cols=96 Identities=82% Similarity=1.295 Sum_probs=89.6
Q ss_pred hhhhhhhhhhhcCCCCcCcccCCCCcceeeeecCCCCccEEEEEEEEcCCCcEEeeeeeccccchhHhhHHHHHHHHcCC
Q psy15216 1769 MSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSSLVTEWVKGK 1848 (2602)
Q Consensus 1769 ~~y~~~i~dh~~~p~~~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~~~~~i~~~~~~~~gc~~~~a~~s~~~~~~~g~ 1848 (2602)
.+|+++|+|||+||||+|.|++++..+++++++||+|||.|+|||+|+++|+|+|++|+++||+++|||+||+||+++||
T Consensus 2 ~~Y~~~Ildh~~~P~n~g~l~~~~~~~~~~~~~np~CGD~i~l~l~v~~~~~I~d~~f~~~GCais~ASaS~~te~i~Gk 81 (129)
T 3lvl_A 2 SAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGK 81 (129)
T ss_dssp -CCCHHHHHHHHSCSSBSCCCTTCSSEEEEEEECTTTCCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHhCCCCCCCCCCCCcceeEEEecCCCCCCEEEEEEEECCCCeEEEEEEEecCCHHHHHHHHHHHHHHcCC
Confidence 37999999999999999999998887889999999999999999999756899999999999999999999999999999
Q ss_pred Chhhhhcccccchhhh
Q psy15216 1849 TLDEAMSIKNTDIAEE 1864 (2602)
Q Consensus 1849 ~~~~~~~i~~~~i~~~ 1864 (2602)
|++||..++++++.+.
T Consensus 82 t~~ea~~i~~~~i~~~ 97 (129)
T 3lvl_A 82 SLDEAQAIKNTDIAEE 97 (129)
T ss_dssp CHHHHHTCCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHH
Confidence 9999999998876654
No 247
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.88 E-value=2e-22 Score=267.58 Aligned_cols=336 Identities=11% Similarity=0.028 Sum_probs=230.4
Q ss_pred CCCHHHHHHHHHHHhhhcCC-------CCCCCcchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHH
Q psy15216 8 PIDPRVVDKMIPYLRVQFGN-------PASRNHIYGWTAEKAIEKARNEVAQLI------YADPREIIWTSGATESNNLA 74 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~-------p~~~~~~~~~~~~~~~~~~r~~lA~~~------g~~~~~Iv~t~g~T~al~~~ 74 (2602)
..++.+.+++.+++...+.+ +....+..++......+++|+.+|+++ ++++++|++|+|+|+|++++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~ 122 (444)
T 3if2_A 43 AKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYL 122 (444)
T ss_dssp CCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHH
T ss_pred CcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHH
Confidence 34567777777777665555 420011223332334567778888777 56788999999999999999
Q ss_pred HHhcccccccCCC--------------EEEEc-CCCCcccHHHHH---HHHhCCcEEEEeccCC-C----CccChHHHHh
Q psy15216 75 IKGAAHFYKKRGK--------------HIITV-QTEHKSVLDSIR---KLENDGFRVTYLKPKN-N----GLITLSQLEE 131 (2602)
Q Consensus 75 ~~~l~~~~~~~gd--------------~Vlv~-~~~~~s~~~~~~---~~~~~G~~v~~v~~~~-~----~~ld~e~l~~ 131 (2602)
+.++. ++|| +|+++ .|+|+++...+. .+...|..++.+++++ + +.+|+++|++
T Consensus 123 ~~~l~----~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~ 198 (444)
T 3if2_A 123 FNLFG----GAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALEN 198 (444)
T ss_dssp HHHSS----EEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHT
T ss_pred HHHHh----CCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHH
Confidence 99987 6787 78876 899998865331 2234578888888775 2 3689999999
Q ss_pred h---ccCCceEEEEecccCccccccc---HHHHHHHHHhcCCEEEEecccccccccc-----cCCCCCccEEEecccccc
Q psy15216 132 K---ICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKIDI-----NIQNYKVDLMSFSAHKIY 200 (2602)
Q Consensus 132 ~---i~~~tklv~i~~~~npTG~~~~---l~~I~~la~~~g~~livD~a~a~g~~~~-----dl~~~~~D~~~~S~~K~~ 200 (2602)
+ +++++++|++++|+||||.++| +++|+++|++||+++|+|++|+.+.... .....+.+++++|+||+
T Consensus 199 ~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~- 277 (444)
T 3if2_A 199 LPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI- 277 (444)
T ss_dssp CHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-
T ss_pred HHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc-
Confidence 8 7889999999999999999999 7888999999999999999997532211 11223567999999996
Q ss_pred CCCC--cEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHH--HHHhHHH-HHHHHHHHHHHHHHHHhh
Q psy15216 201 GPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL--ARIEMKE-ELKRILFLQKRLYNGLME 275 (2602)
Q Consensus 201 Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~--~~~~~~~-~~~~~~~l~~~l~~~L~~ 275 (2602)
+++| +||++.++++++.+..... ....+++.....++..+++. ......+ ..+++.++++.+.+.|.+
T Consensus 278 ~~~G~r~G~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (444)
T 3if2_A 278 GLPGMRTGIIVADAKVIEAVSAMNA-------VVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQ 350 (444)
T ss_dssp TCGGGCCEEEECCHHHHHHHHHHHH-------HHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceEEEEECHHHHHHHHHHHH-------hccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555 8999988776666654321 11223455555555555552 1122222 556667777777777766
Q ss_pred ccC--ceEEeCCCCCCCCceEEEEEcc--cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEe
Q psy15216 276 SIE--EIYINGDMNNRIPHNLNISFNF--IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT 349 (2602)
Q Consensus 276 ~~~--g~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis 349 (2602)
.++ ++.+..+.. ....++.++. .+..++...| +||.+++|..|..+...++ .....+++||+
T Consensus 351 ~l~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~---------~~~~~~~iRis 418 (444)
T 3if2_A 351 ALGDYPLMIHKPEG---AIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSD---------YQHAHECIRMS 418 (444)
T ss_dssp HSSSSSEEEECCCB---SSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTT---------CSGGGSEEEEE
T ss_pred hcccCCceEecCCc---cEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcc---------cccCCCeEEEE
Confidence 445 355554432 2345566663 4667777776 7999999998865310000 01123789999
Q ss_pred cCCCCCHHHHHHHHHHHHhh
Q psy15216 350 IGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 350 ~~~~~t~edid~li~~L~~~ 369 (2602)
++. +++++++++++|++.
T Consensus 419 ~~~--~~e~i~~~l~~l~~~ 436 (444)
T 3if2_A 419 IAA--DEQTLIDGIKVIGEV 436 (444)
T ss_dssp SSS--CHHHHHHHHHHHHHH
T ss_pred EeC--CHHHHHHHHHHHHHH
Confidence 986 899999999999864
No 248
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.88 E-value=3.2e-23 Score=268.01 Aligned_cols=314 Identities=15% Similarity=0.145 Sum_probs=207.9
Q ss_pred cceEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCCcEEecHHHHhhhccCCCCchhhhhhhcCCCCCCC
Q psy15216 2032 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNI 2111 (2602)
Q Consensus 2032 ~~~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~ 2111 (2602)
++.++|||+|||+++++++.++++.+. ..|...+||.+. .+| ...+++.+...+|+++++.. .
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~~--~~g-----------~i~d~~~~~~~ik~~~~~~~--~ 74 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGLL--MEG-----------MVAEPAALAQEIKELLLEAR--T 74 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTSE--ETT-----------EESCHHHHHHHHHHHHHHHT--C
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCcc--cCC-----------CcCCHHHHHHHHHHHHHHcC--C
Confidence 346899999999999999887766552 335555666432 222 34567778888999887621 1
Q ss_pred CCCCCCeeeecCCCceEEEecCceeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCCCCHHH---------------
Q psy15216 2112 NTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQ--------------- 2176 (2602)
Q Consensus 2112 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~q--------------- 2176 (2602)
........+... ...........++++++... ++..++++++.++.+++|++| +.+.+
T Consensus 75 ~~~~v~~~i~~~-~~~~~~~~~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~--~~~~~~~~~~~~~~~v~~va 147 (377)
T 2ych_A 75 RKRYVVTALSNL-AVILRPIQVPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFA--PLTPLSEVQEGEQVQVMVAA 147 (377)
T ss_dssp CCCEEEEEECGG-GCEEEEEEEECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEE--ESSCGGGSCTTSEEEEEEEE
T ss_pred CcceEEEEecCC-cEEEEEEECCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEE--EeCCCCCCCCcceeEEEEEE
Confidence 111111111111 01111111135678887653 455788889999999999998 33332
Q ss_pred -----HHHHHHHHHHcCCceeEeechhHHHHHHhhhcc-CCCCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCc
Q psy15216 2177 -----RQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDK-NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLG 2250 (2602)
Q Consensus 2177 -----r~~l~~Aa~~AGl~~~~li~EP~AAAl~y~~~~-~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lG 2250 (2602)
.+.+++|++.||+++..++.||+|||++|+... ...+..++|+|+||||||+++++. +.+ . ..++..+|
T Consensus 148 ~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~--g~~--~-~~~~~~~G 222 (377)
T 2ych_A 148 ARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRG--DKP--L-AVRVLTLS 222 (377)
T ss_dssp EEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEET--TEE--E-EEEEESCS
T ss_pred ecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEEC--CEE--E-EEEeeech
Confidence 389999999999999999999999999986533 233567899999999999999873 332 2 34558999
Q ss_pred hhHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHhcccceEEE----EEEecCCceEEEEcCHHHHHHHHHHHHH
Q psy15216 2251 GDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKL----NVKLSDKKIVNITIDMKQFFTITQHLVN 2326 (2602)
Q Consensus 2251 G~~~D~~l~~~l~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~----~i~~~~~~~~~~~itr~~fe~l~~~~~~ 2326 (2602)
|.+||+.|.+.+. .. ...+|++|+.++....... .+++. ....+++|++|++++++.++
T Consensus 223 G~~i~~~i~~~~~-------~~-------~~~aE~~K~~~~~~~~~~~~~~~~i~~~---~~~~~i~~~~~~~~i~~~~~ 285 (377)
T 2ych_A 223 GKDFTEAIARSFN-------LD-------LLAAEEVKRTYGMATLPTEDEELLLDFD---AERERYSPGRIYDAIRPVLV 285 (377)
T ss_dssp HHHHHHHHHHHTT-------CC-------HHHHHHHHHHTC----------------------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-------CC-------HHHHHHHHhhcccccccccccccccccc---cccccCCHHHHHHHHHHHHH
Confidence 9999999886321 11 4678999999876432111 11121 13467899999999999999
Q ss_pred HHHHHHHHHHHHc--CCCccccceEEEEeCccchHHHHHHHHhhcCCcccCC--------------------CCccchhh
Q psy15216 2327 RTILLSSKALMDA--NLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTS--------------------IDPDKAVV 2384 (2602)
Q Consensus 2327 ~~~~~i~~~l~~~--~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~~~--------------------~~p~~aVa 2384 (2602)
++.+.|.+.|+.. +.....++.|+|+||+|++|.+++.+++.|+.++... .+|..++|
T Consensus 286 ~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~~l~~~~p~~a~a 365 (377)
T 2ych_A 286 ELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQLQEIGPEFAVA 365 (377)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHHHHHhhhHHHHHH
Confidence 9999999999963 5556689999999999999999999999998654432 13344567
Q ss_pred hHHHHHh
Q psy15216 2385 FGAAIQA 2391 (2602)
Q Consensus 2385 ~GAa~~a 2391 (2602)
.|+|+++
T Consensus 366 ~Glal~~ 372 (377)
T 2ych_A 366 LGLALRG 372 (377)
T ss_dssp HHHHHHH
T ss_pred HHHHHcC
Confidence 7777765
No 249
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.88 E-value=3.2e-21 Score=259.32 Aligned_cols=311 Identities=17% Similarity=0.228 Sum_probs=220.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHhhhhhh----ccCC-----C-EEEEcCCCCcchH
Q psy15216 1429 HIYGWTAEKAIEKARNEVAQLIYAD--PREIIWTSGATESNNLAIKGAAHFY----KKRG-----K-HIITVQTEHKSVL 1496 (2602)
Q Consensus 1429 ~~~~~~~~~~~~~lr~~ia~~~g~~--~~~iv~t~gaT~al~~al~~l~~~~----~~~g-----d-~Vlv~~~~~~s~~ 1496 (2602)
|..+.....+..++++++++++|++ +++++||+|+|+|+..++.++.... .++| + +|+++.++|+++.
T Consensus 124 ~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~ 203 (504)
T 2okj_A 124 YEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK 203 (504)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH
T ss_pred hhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHH
Confidence 4445556677788889999999997 7789999999999999999885211 0245 6 8999999999998
Q ss_pred HHHHHHHhCCc-EEEEeccCCCCCcChhHHHhhccC------CceEEEEeccccccccccChHHHHHHhhhcCCEEEEec
Q psy15216 1497 DSIRKLENDGF-RVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDA 1569 (2602)
Q Consensus 1497 ~~~~~~~~~G~-~v~~v~~~~~~~id~d~l~~~i~~------~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~ 1569 (2602)
.++..+.. |. +++.++.++++.+|+++|+++|++ +|++|++++++|+||.+.|+++|+++|++||+|+|+|+
T Consensus 204 ~~~~~~g~-g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~ 282 (504)
T 2okj_A 204 KAGAALGF-GTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDA 282 (504)
T ss_dssp HHHHHTTS-CGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHcCC-CcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEeh
Confidence 88877622 33 899999988899999999999976 58999999999999999999999999999999999999
Q ss_pred ccccCccc-----ccCCCC-CccEEEEccccccC-CCceEEEEEecC-CCCc----cccccccCCcc---------ccCC
Q psy15216 1570 AQAVGKID-----INIQNY-KVDLMSFSAHKIYG-PKGIGALYIRRN-PRTR----IEAQIHGGGHE---------YGLR 1628 (2602)
Q Consensus 1570 a~~~g~~~-----~~l~~~-~~D~~v~S~~K~~g-p~G~G~l~~~~~-~~~~----l~~~~~g~~~~---------~~~~ 1628 (2602)
+|+.+... ..+... ++|++++++||+++ |.|+|+++++++ ++.. ..+...++... ....
T Consensus 283 a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 362 (504)
T 2okj_A 283 AWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQ 362 (504)
T ss_dssp TTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSC
T ss_pred hhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCC
Confidence 99877653 233332 68999999999655 888999999874 3321 22222222110 0001
Q ss_pred CCC-cchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCC--------
Q psy15216 1629 SGT-LATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE-------- 1698 (2602)
Q Consensus 1629 ~gt-~~~~~~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~-------- 1698 (2602)
.+. .....++ +++. +...+++++.++..++++++.+.|.+ .+++.+..+.... ...+.|.+....
T Consensus 363 ~~rr~~~l~~~---a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~p~-~~~v~f~~~~~~~~~~~~~~ 437 (504)
T 2okj_A 363 CGRHVDIFKFW---LMWKAKGTVGFENQINKCLELAEYLYAKIKN-REEFEMVFNGEPE-HTNVCFWYIPQSLRGVPDSP 437 (504)
T ss_dssp SSCBCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CTTEEESSSSCCS-SSCEEEEECCGGGSSCCCCH
T ss_pred CCCCccHHHHH---HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEecCCCC-eEEEEEEEeCccccccccch
Confidence 110 1122222 3333 23467888999999999999999987 7899988631111 223334332110
Q ss_pred ---------cHHHHHhc--CCE-EEccccccCCCCCChhHHHHHcCCCccccCCeEEEecC-CCCCHHHHHHHHHHHHH
Q psy15216 1699 ---------GESLLMAI--KDI-AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1699 ---------~~~~~~~L--~gI-~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~-~~~t~edid~li~~L~~ 1764 (2602)
...+...| +|+ .+.+.. +.. ..+++|++++ +++|.+||++++++|++
T Consensus 438 ~~~~~~~~~~~~l~~~L~~~G~~~~~~~~-~~~------------------~~~~lRis~~~~~~t~edi~~~~~~l~~ 497 (504)
T 2okj_A 438 QRREKLHKVAPKIKALMMESGTTMVGYQP-QGD------------------KANFFRMVISNPAATQSDIDFLIEEIER 497 (504)
T ss_dssp HHHHHHTTHHHHHHHHHHHHTSCEEEEEE-ETT------------------EEEEEEECCCCTTCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhCCcEEEEeeE-ECC------------------ceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 12344444 453 332111 100 0158999996 89999999999999987
No 250
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.88 E-value=5.3e-23 Score=265.69 Aligned_cols=328 Identities=15% Similarity=0.101 Sum_probs=226.7
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
+.++.+.+++.+.+...+..+ .+..+++|+.+++++|.+ ++++++|+|+|+++++.++. +++||
T Consensus 13 ~~~~~v~~a~~~~~~~~~~~~-----------~~~~~~l~~~la~~~~~~--~~~~~~sGt~al~~al~~~~---~~~gd 76 (367)
T 3nyt_A 13 RIKDKIDAGIQRVLRHGQYIL-----------GPEVTELEDRLADFVGAK--YCISCANGTDALQIVQMALG---VGPGD 76 (367)
T ss_dssp HHHHHHHHHHHHHHHHCCCSS-----------CHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTT---CCTTC
T ss_pred ccCHHHHHHHHHHHhcCCccC-----------ChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhC---CCCcC
Confidence 445677788887776532211 135788999999999976 89999999999999999984 37999
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC-CccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcC
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g 166 (2602)
+|+++.++|+++...+... |+++++++++++ +.+|++++++++++++++|+ ++||||...|+++|.++|++||
T Consensus 77 ~Vi~~~~~~~~~~~~~~~~---G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la~~~~ 150 (367)
T 3nyt_A 77 EVITPGFTYVATAETVALL---GAKPVYVDIDPRTYNLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIASKYG 150 (367)
T ss_dssp EEEEESSSCTHHHHHHHHT---TCEEEEECBCTTTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTT
T ss_pred EEEECCCccHHHHHHHHHc---CCEEEEEecCCccCCcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHHHHcC
Confidence 9999999999988877655 999999999875 78999999999999999888 6778999999999999999999
Q ss_pred CEEEEecccccccccccCCCCCc--cEEEecc--ccccCCCC-cEEEEEe-cCCCCcccceecCCCcccccc------cc
Q psy15216 167 VIFHCDAAQAVGKIDINIQNYKV--DLMSFSA--HKIYGPKG-IGALYIR-RNPRTRIEAQIHGGGHEYGLR------SG 234 (2602)
Q Consensus 167 ~~livD~a~a~g~~~~dl~~~~~--D~~~~S~--~K~~Gp~G-~G~l~~~-~~~~~~l~~~~~g~~~~~~~~------~g 234 (2602)
+++|+|++|+.|.. .+....+. |++++|| ||++|+.| .|+++.+ +++.+.+.+....+.. ..+. ..
T Consensus 151 ~~li~D~a~~~g~~-~~~~~~~~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~-~~~~~~~~g~~~ 228 (367)
T 3nyt_A 151 IPVIEDAAQSFGAS-YKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQD-RRYHHIRVGVNS 228 (367)
T ss_dssp CCBEEECTTTTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEE-ETTEECSCCCBC
T ss_pred CEEEEECccccCCe-ECCeeccCCCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCC-cCceeeccCcCC
Confidence 99999999998764 22222222 8999996 89888755 6777774 4455555443332211 1111 11
Q ss_pred CcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCC--CCCceEEEEEcccChhHHHHHh--
Q psy15216 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN--RIPHNLNISFNFIEGESLLMAI-- 310 (2602)
Q Consensus 235 t~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~L-- 310 (2602)
..+....++....+ +.+++..++.+++++++.+.|.+ . ++.+...+.. ..+..+.+.+ .+.+.+...|
T Consensus 229 ~~~~~~aa~~~~~l----~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~ 300 (367)
T 3nyt_A 229 RLDTLQAAILLPKL----EIFEEEIALRQKVAAEYDLSLKQ-V-GIGTPFIEVNNISVYAQYTVRM--DNRESVQASLKA 300 (367)
T ss_dssp CCCHHHHHHHHHHH----HTHHHHHHHHHHHHHHHHHHHHH-T-TCCCCCCCTTEECCCSSEEEEC--SSHHHHHHHHHH
T ss_pred CccHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcc-C-CeeccCCCCCCceeeEEEEEEe--CCHHHHHHHHHH
Confidence 12222222222222 34567778888899999999987 3 4444322221 1222333333 3667777777
Q ss_pred CCeEEcccccCCCCCCChHHH--HHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 311 KDIAVSSGSACTSASLEPSYV--LRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 311 ~gI~v~~g~~~~~~~~~~~~~--~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
+||.++.+... +.+.++.+. ...++..++...+.||++++..+|++|++++++.|++
T Consensus 301 ~GI~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 301 AGVPTAVHYPI-PLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp HTCCCBCSCSS-CGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred CCCceeccCCC-ccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 69988766421 112222221 1111122233347899999999999999999999995
No 251
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.88 E-value=1.2e-21 Score=259.07 Aligned_cols=316 Identities=15% Similarity=0.097 Sum_probs=233.0
Q ss_pred CCHHHHHHHHHHHhhc----cCCCCCccchhHHHHHHHHHHHHHHHHHHh----CC-CCCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1405 IDPRVVDKMIPYLRVQ----FGNPASRNHIYGWTAEKAIEKARNEVAQLI----YA-DPREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~----~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g~-~~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
+++.+.+++.+.++.. ..++.. ....++|+++++++ |. ++++|++|+|+++|+..++.++.
T Consensus 92 p~~~v~~a~~~~l~~~~~~~~~Y~~~----------~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~ 161 (448)
T 3aow_A 92 PKEIIRDILVEIMEKYADKALQYGTT----------KGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFL 161 (448)
T ss_dssp CHHHHHHHHHHHHHHSHHHHHSCCCT----------TCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhhhHHHhCCCCC----------CCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHc
Confidence 4567888888877642 122221 12456777887777 88 77899999999999999999987
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhcc----C--CceEE-EEeccccccccc
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC----S--DTILV-SVMLVNNEIGVI 1548 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~----~--~t~lv-~l~~~~n~tG~~ 1548 (2602)
++||+|+++.|+|+++...+.. .|++++.++.++++ +|+++|+++++ + ++++| ++++++||||.+
T Consensus 162 ----~~Gd~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~ 233 (448)
T 3aow_A 162 ----NPGDIVVVEAPTYLAALQAFNF---YEPQYIQIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT 233 (448)
T ss_dssp ----CTTCEEEEEESCCHHHHHHHHT---TCCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC
T ss_pred ----CCCCEEEEeCCChHHHHHHHHH---cCCEEEEeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCC
Confidence 8999999999999998766554 49999999987665 99999999997 6 78987 578999999999
Q ss_pred cC---hHHHHHHhhhcCCEEEEecccccCcc----cc---cCCCCCccEEEEccccccCCCc--eEEEEEecCCCCcccc
Q psy15216 1549 QP---ILEIGELCRSKGVIFHCDAAQAVGKI----DI---NIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEA 1616 (2602)
Q Consensus 1549 ~~---l~~I~~ia~~~gi~vivD~a~~~g~~----~~---~l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~ 1616 (2602)
+| +++|.++|++||+++|+|++|+.... .. .+...+.++++.|++|.+| +| +||+++++++++.+..
T Consensus 234 ~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~ 312 (448)
T 3aow_A 234 MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEI 312 (448)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCHHHHHHHHH
Confidence 98 56899999999999999999976432 11 2222345788999999888 67 7999999877666544
Q ss_pred ccccCCccccCCCCCcchhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhcCC-cEEEeCCCCCCCCceEEEE
Q psy15216 1617 QIHGGGHEYGLRSGTLATHQIVGMGEAFRL--ARIEMKEELKRILFLQKRLYNGLMESIE-EIYINGDMNNRIPHNLNIS 1693 (2602)
Q Consensus 1617 ~~~g~~~~~~~~~gt~~~~~~~al~~aL~~--~~~~~~~~~~~~~~l~~~l~~~L~~~~~-gl~i~~~~~~~~~~~~~~~ 1693 (2602)
.... . ..+++...+.++.++|+. ....++..++++.++++++.+.|.+.+| ++.+..+.. .....+.
T Consensus 313 ~~~~------~-~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~---g~~~~v~ 382 (448)
T 3aow_A 313 AKQS------T-DLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEG---GMFIWVT 382 (448)
T ss_dssp HHHH------H-HSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSB---SSEEEEE
T ss_pred HHHH------h-cCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCc---cEEEEEE
Confidence 3211 1 123455666666677763 2455778888888999999999987456 577654322 2233344
Q ss_pred Eec-CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1694 FNF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1694 ~~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
++. .+..++...| +||.+.+|..|... ....+++||+++.. +.+++++++++|++.
T Consensus 383 ~~~~~~~~~l~~~l~~~gV~v~pg~~f~~~---------------~~~~~~iRls~~~~-~~e~i~~~~~~L~~~ 441 (448)
T 3aow_A 383 LPDGIDSKKMLERAIKKGVAYVPGEAFYAH---------------RDVKNTMRLNFTYV-DEDKIMEGIKRLAET 441 (448)
T ss_dssp CSTTCCHHHHHHHHHHTTEECEEGGGGSTT---------------CCCCSEEEEECSSS-CTHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHCCcEEEcchhhcCC---------------CCCCCEEEEEeCCC-CHHHHHHHHHHHHHH
Confidence 442 3456676666 79999999877542 01137899999864 789999999999974
No 252
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.88 E-value=5.2e-22 Score=259.90 Aligned_cols=318 Identities=16% Similarity=0.150 Sum_probs=233.5
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCC
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 1483 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd 1483 (2602)
..++.+.+++.+.+... +++.. .+.+.+.......++|+++++++|.+ +.++++++|+|+..++.++. ++||
T Consensus 57 ~~~~~v~~a~~~~~~~~-~~~~~-~~~~~~g~~~~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~~l~~~~----~~gd 128 (399)
T 3tqx_A 57 ADHPALIKTAQTVVEQY-GFGMA-SVRFICGTQTIHKELEKDISEFLGTD--DTILYSSCFDANGGLFETLL----GPED 128 (399)
T ss_dssp TTCHHHHHHHHHHHHHH-CSCCC-SCCCCCCCBHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHTTHHHHC----CTTC
T ss_pred cCCHHHHHHHHHHHHHh-CCCCC-CcCccccCchHHHHHHHHHHHHHCCC--cEEEECchHHHHHHHHHHhc----CCCC
Confidence 34788999999988763 22211 11111222346789999999999975 45555566889999888876 8999
Q ss_pred EEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC------CceEEEEeccccccccccChHHHHHH
Q psy15216 1484 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGEL 1557 (2602)
Q Consensus 1484 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~------~t~lv~l~~~~n~tG~~~~l~~I~~i 1557 (2602)
+|+++.+.|+++...+.. .|++++.++. +|++++++++++ ++++|++++++||||.++|+++|.++
T Consensus 129 ~v~~~~~~~~~~~~~~~~---~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l 200 (399)
T 3tqx_A 129 AIISDELNHASIIDGIRL---CKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDL 200 (399)
T ss_dssp EEEEETTCCHHHHHHHHS---CCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHH
T ss_pred EEEECCcccHHHHHHHHH---cCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHH
Confidence 999999999998766544 4999998875 478899998875 89999999999999999999999999
Q ss_pred hhhcCCEEEEecccccCcccc------cCCC--CCccEEEEccccccC-CCceEEEEEecCCCCccccccccCCccccCC
Q psy15216 1558 CRSKGVIFHCDAAQAVGKIDI------NIQN--YKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGHEYGLR 1628 (2602)
Q Consensus 1558 a~~~gi~vivD~a~~~g~~~~------~l~~--~~~D~~v~S~~K~~g-p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~ 1628 (2602)
|++||+++|+|++|+.+.... +... .++|+++.|+||.+| ++| ||++.++++++.+...... ...
T Consensus 201 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~~~~~~~~~-----~~~ 274 (399)
T 3tqx_A 201 ADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHKEIIEWLRNRSRP-----YLF 274 (399)
T ss_dssp HHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECHHHHHHHHHHCHH-----HHS
T ss_pred HHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCHHHHHHHHHhCcc-----eec
Confidence 999999999999997654321 1111 257999999999766 988 9999998766655432110 112
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-CCcHHHHHhc-
Q psy15216 1629 SGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI- 1706 (2602)
Q Consensus 1629 ~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~L- 1706 (2602)
.++.+...+.++.++++....+.++.++++.++++++.+.|.+. ++.+..+ . ..+..+.++. .+..++...|
T Consensus 275 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~ 348 (399)
T 3tqx_A 275 SNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL--GFQLVPG-N---HPIIPVMLGDAQLATNMADHLL 348 (399)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH--TCCBCCC-S---SSEEEEEEECHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc--CCCcCCC-C---CCEEEEEeCCHHHHHHHHHHHH
Confidence 45677777777778888654567889999999999999999883 5554422 1 2233344443 2345666655
Q ss_pred -CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1707 -KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1707 -~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+||.++++..+..+ ...+++|++++.++|.+++++++++|++.
T Consensus 349 ~~gi~v~~~~~~~~~----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 392 (399)
T 3tqx_A 349 QEGIYVVGFSYPVVP----------------MGKARIRVQMSAVHTQQQLDRAIEAFGQV 392 (399)
T ss_dssp HTTEECCEECTTTSC----------------TTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HCCCEEeeeCCCCCC----------------CCCceEEEEeecCCCHHHHHHHHHHHHHH
Confidence 89999876433211 12368999999999999999999999974
No 253
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.88 E-value=1e-21 Score=261.14 Aligned_cols=321 Identities=16% Similarity=0.113 Sum_probs=230.3
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHh----CCCCCcEEEeCCHHHHHHHHHHhcccccc
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YADPREIIWTSGATESNNLAIKGAAHFYK 83 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g~~~~~Iv~t~g~T~al~~~~~~l~~~~~ 83 (2602)
+.|+.+.+++.+.+.....++.. +. +.......++|+++++++ ++++++|++++|+++++.++ .++.
T Consensus 82 ~~~~~v~~a~~~~~~~~~~~~~~--~~--y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~-~~l~---- 152 (449)
T 3qgu_A 82 PLPKYIADAMAKAAAGLATREGY--SG--YGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI-QMMF---- 152 (449)
T ss_dssp CCCHHHHHHHHHHHHGGGGSCCC--CC--STTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHHH----
T ss_pred CCCHHHHHHHHHHHHhhccccCC--CC--CCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH-HHHh----
Confidence 67899999999988754322211 11 111123577889999998 77888999999999999998 7776
Q ss_pred cCCCEEEEcCCCCcccHHHHHHHHhCCcE----------EEEeccCCCC--ccChHHHHhhccCCceEEEEecccCcccc
Q psy15216 84 KRGKHIITVQTEHKSVLDSIRKLENDGFR----------VTYLKPKNNG--LITLSQLEEKICSDTILVSVMLVNNEIGV 151 (2602)
Q Consensus 84 ~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~----------v~~v~~~~~~--~ld~e~l~~~i~~~tklv~i~~~~npTG~ 151 (2602)
++||+|+++.|.|+++...+... |++ ++.++.++.+ ..|++++ +++++|++++|+||||.
T Consensus 153 ~~gd~Vl~~~p~~~~~~~~~~~~---g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~ 224 (449)
T 3qgu_A 153 GSKPTVAVQDPSYPVYVDTSVMM---GMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGA 224 (449)
T ss_dssp CSSSCEEEEESCCTHHHHHHHHH---TCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCC
T ss_pred CCCCEEEEcCCCChhHHHHHHHc---CCcccccccccceeEEEecccccCCcCChhHc-----CCCCEEEEeCCCCCCCC
Confidence 79999999999999998888777 776 8888877543 3444322 68999999999999999
Q ss_pred ccc---HHHHHHHHHhcCCEEEEeccccccc----ccccCCC----CCccEEEeccccccCCCC--cEEEEEecCCCCc-
Q psy15216 152 IQP---ILEIGELCRSKGVIFHCDAAQAVGK----IDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTR- 217 (2602)
Q Consensus 152 ~~~---l~~I~~la~~~g~~livD~a~a~g~----~~~dl~~----~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~- 217 (2602)
++| +++|+++|++||+++|+|++|+... .+..+.. .+.++++.|+||.+|++| +||+++++++++.
T Consensus 225 ~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~ 304 (449)
T 3qgu_A 225 AATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYAN 304 (449)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTT
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhh
Confidence 998 6678888999999999999997632 2222222 245689999999988777 8999999887763
Q ss_pred ccceecCCCccccccccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEE
Q psy15216 218 IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNI 296 (2602)
Q Consensus 218 l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~ 296 (2602)
..+....+........++++.+...++.+++.. ...+.++..+++.++++++.+.|.+ . |+.+..+.. ..++.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~ 379 (449)
T 3qgu_A 305 GEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTE-M-GFSVYGGDD---APYIWV 379 (449)
T ss_dssp SCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCEEESSS---SSEEEE
T ss_pred hhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeeeCCCC---eeEEEE
Confidence 000000000001112335666666666667653 3356788899999999999999988 3 776664432 234445
Q ss_pred EEcccChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 297 SFNFIEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 297 ~~~~~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++..+..++...| +||.+++|..|.+. ..++|||++. .+++++++++++|++.
T Consensus 380 ~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~-----------------~~~~iRis~~--~~~e~i~~~l~~l~~~ 436 (449)
T 3qgu_A 380 GFPGKPSWDVFAEILERCNIVTTPGSGYGPA-----------------GEGFVRASAF--GSRENILEAVRRFKEA 436 (449)
T ss_dssp ECTTSCHHHHHHHHHHHHCEECEEGGGGCGG-----------------GTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHCCEEEecchHhCCC-----------------CCCeEEEEec--CCHHHHHHHHHHHHHH
Confidence 55544566777665 49999999877542 1389999965 4999999999999863
No 254
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.88 E-value=7.3e-22 Score=254.46 Aligned_cols=319 Identities=17% Similarity=0.190 Sum_probs=232.4
Q ss_pred eeeccC-CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHh
Q psy15216 1395 NIVFKD-ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKG 1473 (2602)
Q Consensus 1395 ~v~L~~-~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~ 1473 (2602)
.++++. ...+.++.+.+++.+.+... .+.. ...+..+++++++++++|++++++++|+|+|+|++.++.+
T Consensus 15 ~i~l~~~~~~~~~~~v~~a~~~~~~~~--~~~~-------g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~ 85 (359)
T 1svv_A 15 PYSFVNDYSVGMHPKILDLMARDNMTQ--HAGY-------GQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSL 85 (359)
T ss_dssp CEECSCSCSSCCCHHHHHHHHHHTTCC--CCST-------TCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHH
T ss_pred eEEecCCCcCCCCHHHHHHHHHHHhhc--cccc-------cccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHH
Confidence 567753 33577889999999887531 1111 1234678899999999999888999999999999999999
Q ss_pred hhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCC-------ceEEEEeccccccc
Q psy15216 1474 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD-------TILVSVMLVNNEIG 1546 (2602)
Q Consensus 1474 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~-------t~lv~l~~~~n~tG 1546 (2602)
+. ++||+|++++++|+++... ..+...|++++.++.+ ++.+|+++|+++++++ +++|+++++ ||||
T Consensus 86 ~~----~~gd~vl~~~~~~~~~~~~-~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG 158 (359)
T 1svv_A 86 AL----RPWEAVIATQLGHISTHET-GAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVG 158 (359)
T ss_dssp HC----CTTEEEEEETTSHHHHSST-THHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTS
T ss_pred Hh----CCCCEEEEcccchHHHHHH-HHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCc
Confidence 87 7999999999999998663 1233459999999976 6789999999999876 899999999 7999
Q ss_pred cccC---hHHHHHHhhhcCCEEEEeccc---ccCcccccCCC----CCccEEEEccccccCCCceEEEEEecCCCCcccc
Q psy15216 1547 VIQP---ILEIGELCRSKGVIFHCDAAQ---AVGKIDINIQN----YKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEA 1616 (2602)
Q Consensus 1547 ~~~~---l~~I~~ia~~~gi~vivD~a~---~~g~~~~~l~~----~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~ 1616 (2602)
.++| +++|.++|++||+++|+|++| +.|..+.+... ...|++++|+||+++|.|+|++++++++++.+.+
T Consensus 159 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~~~~~ 238 (359)
T 1svv_A 159 TQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARH 238 (359)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCTTHHH
T ss_pred eecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCCCCceEEEEEcccHHHHHHH
Confidence 9999 889999999999999999999 55655443332 3578999999999888889999999888887765
Q ss_pred ccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec
Q psy15216 1617 QIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF 1696 (2602)
Q Consensus 1617 ~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~ 1696 (2602)
....++. .+ ..+.....++..++. ..++++..+++.++++++.+.| + .+++.+..+.. .....+.++
T Consensus 239 ~~~~~~~--~~---~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~l~~~L-~-~~~~~~~~~~~---~~~~~~~~~- 305 (359)
T 1svv_A 239 LIKQRGA--LM---AKGWLLGIQFEVLMK--DNLFFELGAHSNKMAAILKAGL-E-ACGIRLAWPSA---SNQLFPILE- 305 (359)
T ss_dssp HHHHTTC--CC---TTTHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHH-H-HTTCCBSSCCS---SSEECBEEE-
T ss_pred HHhcCCc--cc---ccchhhHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHh-c-cCCeEEccCCc---cceEEEEcC-
Confidence 4211111 00 111222222322232 1345778889999999999999 4 46776654322 122222222
Q ss_pred CCcHHHHHhc--C-CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1697 IEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1697 ~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.++...| + ||.+. +.. . ...+++|++++..++.+++++++++|++.
T Consensus 306 ---~~~~~~l~~~~gi~v~-~~~--~-----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 354 (359)
T 1svv_A 306 ---NTMIAELNNDFDMYTV-EPL--K-----------------DGTCIMRLCTSWATEEKECHRFVEVLKRL 354 (359)
T ss_dssp ---HHHHHHHTTTEECEEE-EEE--T-----------------TTEEEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHhcCEEEE-ecc--c-----------------CCCceEEEEccCcCCHHHHHHHHHHHHHH
Confidence 4566655 5 78772 110 0 01278999999889999999999999873
No 255
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.88 E-value=7.4e-22 Score=255.99 Aligned_cols=288 Identities=16% Similarity=0.139 Sum_probs=221.6
Q ss_pred HHHHHHHHHHHh-CCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-
Q psy15216 1439 IEKARNEVAQLI-YADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN- 1516 (2602)
Q Consensus 1439 ~~~lr~~ia~~~-g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~- 1516 (2602)
..++|+.+++++ +++++++++|+|+|+|+..++.++. ++||+|+++.+.|+++....... |++++.++.++
T Consensus 65 ~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~----~~gd~Vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~ 137 (375)
T 3op7_A 65 SPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLI----EPGDHVISLYPTYQQLYDIPKSL---GAEVDLWQIEEE 137 (375)
T ss_dssp CHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHC----CTTCEEEEEESSCTHHHHHHHHT---TCEEEEEEEEGG
T ss_pred hHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhc----CCCCEEEEeCCCchhHHHHHHHc---CCEEEEEecccc
Confidence 467899999998 5688899999999999999999987 89999999999999987665544 99999998864
Q ss_pred -CCCcChhHHHhhccCCceEEEEeccccccccccC---hHHHHHHhhhcCCEEEEecccccCccc-c-c-CCCCCccEEE
Q psy15216 1517 -NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKID-I-N-IQNYKVDLMS 1589 (2602)
Q Consensus 1517 -~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~~-~-~-l~~~~~D~~v 1589 (2602)
++.+|+++|++++++++++|++++|+||||.++| +++|.++|++||+++|+|++|+..... . . ....+.++++
T Consensus 138 ~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~ 217 (375)
T 3op7_A 138 NGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAV 217 (375)
T ss_dssp GTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEE
T ss_pred CCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEE
Confidence 4558999999999999999999999999999999 999999999999999999998764321 0 0 1113456888
Q ss_pred EccccccCCCc--eEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 1590 FSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYN 1667 (2602)
Q Consensus 1590 ~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~ 1667 (2602)
.|+||.+|++| +|++++++++++.+..... ....+.+.....++..+++.....+++.++++.++++++.+
T Consensus 218 ~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 290 (375)
T 3op7_A 218 NSLSKTYSLPGIRIGWVAANHQVTDILRDYRD-------YTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQ 290 (375)
T ss_dssp EESSSSSSCGGGCCEEEECCHHHHHHHTTTGG-------GTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEChhhcCCcccceEEEEeCHHHHHHHHHHHh-------hhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999888667 6999998776665543321 11234455555556567775555577788888999999999
Q ss_pred HHhhcCCcEEEeCCCCCCCCceEEEEEec-CCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEE
Q psy15216 1668 GLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 1743 (2602)
Q Consensus 1668 ~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 1743 (2602)
.|.+ .+++.+..+... ....+.++. .+..++...+ +||.+++|..|... +++|
T Consensus 291 ~l~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-------------------~~iR 347 (375)
T 3op7_A 291 WIEE-EPLVSYIRPAVV---STSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERD-------------------GYVR 347 (375)
T ss_dssp HHHH-CTTEEECCCSSS---SCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCT-------------------TEEE
T ss_pred HHhh-CCCceEecCCCe---EEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCC-------------------CeEE
Confidence 9987 678887644322 233444442 3455665554 69999998877543 7999
Q ss_pred EecCCCCCHHHHHHHHHHHHHh
Q psy15216 1744 FTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1744 ls~~~~~t~edid~li~~L~~~ 1765 (2602)
++++. +.+++++++++|++.
T Consensus 348 i~~~~--~~~~i~~~l~~l~~~ 367 (375)
T 3op7_A 348 LGFAC--EQETLIKGLEKLSQF 367 (375)
T ss_dssp ECCCS--CHHHHHHHHHHHHHH
T ss_pred EEecC--CHHHHHHHHHHHHHH
Confidence 99885 458999999999873
No 256
>3lvl_A NIFU-like protein; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 3.00A {Escherichia coli} PDB: 2l4x_A 2kqk_A 1q48_A 1r9p_A 1wfz_A
Probab=99.88 E-value=3.3e-23 Score=216.34 Aligned_cols=96 Identities=82% Similarity=1.295 Sum_probs=89.3
Q ss_pred hhhhHhhhhcccCCCCCCCCCCCCCcceeeeeCCCCcccEEEEEEEEcCCCceEeeeeeccccchhHhhHHHHHHHHcCC
Q psy15216 373 MSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSSLVTEWVKGK 452 (2602)
Q Consensus 373 ~~y~~~~~~hy~~p~n~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~~~~~i~~~~~~~~gc~~~~a~~s~~~~~~~g~ 452 (2602)
.+|+++++|||+||||+|.|++++..+++|+++||+|||.|+|+|+|+++|+|+|++|+|+||+++|||||+++|+++||
T Consensus 2 ~~Y~~~Ildh~~~P~n~g~l~~~~~~~~~~~~~np~CGD~i~l~l~v~~~~~I~d~~f~~~GCais~ASaS~~te~i~Gk 81 (129)
T 3lvl_A 2 SAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGK 81 (129)
T ss_dssp -CCCHHHHHHHHSCSSBSCCCTTCSSEEEEEEECTTTCCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHhCCCCCCCCCCCCcceeEEEecCCCCCCEEEEEEEECCCCeEEEEEEEecCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999998877789999999999999999999756899999999999999999999999999999
Q ss_pred Chhhhhhccccchhhh
Q psy15216 453 TLDEAMSIKNTDIAEE 468 (2602)
Q Consensus 453 ~~~e~~~i~~~~i~~~ 468 (2602)
|++||+.++++++.+.
T Consensus 82 t~~ea~~i~~~~i~~~ 97 (129)
T 3lvl_A 82 SLDEAQAIKNTDIAEE 97 (129)
T ss_dssp CHHHHHTCCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHH
Confidence 9999999998776544
No 257
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.88 E-value=9.6e-22 Score=257.43 Aligned_cols=315 Identities=13% Similarity=0.157 Sum_probs=232.9
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCE
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 1484 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~ 1484 (2602)
.++.+.+++.+.++.. +.++. .+.+.+.......++|+++++++|++ +.++++++|+|+..++.++. ++||+
T Consensus 60 ~~~~v~~a~~~~~~~~-~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~~~----~~gd~ 131 (401)
T 1fc4_A 60 NHPDLIAAAKAGMDSH-GFGMA-SVRFICGTQDSHKELEQKLAAFLGME--DAILYSSCFDANGGLFETLL----GAEDA 131 (401)
T ss_dssp TCHHHHHHHHHHHHHH-CSCCC-SCHHHHCCBHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHTTHHHHC----CTTCE
T ss_pred CCHHHHHHHHHHHHHh-CCCCC-CCCcccCCcHHHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHc----CCCCE
Confidence 4789999999988652 22221 12222212456789999999999987 44556667889999888876 89999
Q ss_pred EEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC------CceEEEEeccccccccccChHHHHHHh
Q psy15216 1485 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGELC 1558 (2602)
Q Consensus 1485 Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~------~t~lv~l~~~~n~tG~~~~l~~I~~ia 1558 (2602)
|+++.+.|+++...+ ...|++++.++. +|+++|++++++ ++++|++++++||||.++|+++|.++|
T Consensus 132 v~~~~~~~~~~~~~~---~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~ 203 (401)
T 1fc4_A 132 IISDALNHASIIDGV---RLCKAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLA 203 (401)
T ss_dssp EEEETTCCHHHHHHH---HTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHH
T ss_pred EEEcchhHHHHHHHH---HHcCCceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHH
Confidence 999999998876654 445999988863 588999999875 799999999999999999999999999
Q ss_pred hhcCCEEEEecccccCcc-c--------ccCCCCCccEEEEcccccc-CCCceEEEEEecCCCCccccccccCCccccCC
Q psy15216 1559 RSKGVIFHCDAAQAVGKI-D--------INIQNYKVDLMSFSAHKIY-GPKGIGALYIRRNPRTRIEAQIHGGGHEYGLR 1628 (2602)
Q Consensus 1559 ~~~gi~vivD~a~~~g~~-~--------~~l~~~~~D~~v~S~~K~~-gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~ 1628 (2602)
++||+++|+|++|+.+.. + +++.. +.|+++.|+||.+ |+.| |++++++++++.+...... ..+
T Consensus 204 ~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g-G~~~~~~~~~~~l~~~~~~----~~~- 276 (401)
T 1fc4_A 204 DKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG-GYTAARKEVVEWLRQRSRP----YLF- 276 (401)
T ss_dssp HHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC-EEEEECHHHHHHHHHHCHH----HHH-
T ss_pred HHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC-EEEEcCHHHHHHHHHhCcC----cee-
Confidence 999999999999976553 2 33332 5799999999966 7777 9999988766655432100 011
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-CCcHHHHHhc-
Q psy15216 1629 SGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI- 1706 (2602)
Q Consensus 1629 ~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~L- 1706 (2602)
.++.+...+.++.++++.... .++..+++.++++++.+.|.+ . ++.+. +. ...+..+.++. .+..++...|
T Consensus 277 ~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~---~~~~~~~~~~~~~~~~~l~~~l~ 349 (401)
T 1fc4_A 277 SNSLAPAIVAASIKVLEMVEA-GSELRDRLWANARQFREQMSA-A-GFTLA-GA---DHAIIPVMLGDAVVAQKFARELQ 349 (401)
T ss_dssp SCCCCHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHH-T-TCCBC-CS---SSSEEEEEEECHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH-c-CCccc-CC---CCCEEEEEcCChHHHHHHHHHHH
Confidence 346677777777788875433 467888899999999999987 3 65554 21 23344455543 2345566555
Q ss_pred -CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1707 -KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1707 -~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+||.++++..|..+ ...+++||+++.++|++++++++++|++.
T Consensus 350 ~~gi~v~~~~~~~~~----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 393 (401)
T 1fc4_A 350 KEGIYVTGFFYPVVP----------------KGQARIRTQMSAAHTPEQITRAVEAFTRI 393 (401)
T ss_dssp HTTEECCEECTTSSC----------------TTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HCCcEEeeecCCCCC----------------CCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 79999988765432 01368999999999999999999999974
No 258
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.88 E-value=2.4e-21 Score=259.70 Aligned_cols=326 Identities=13% Similarity=0.122 Sum_probs=229.4
Q ss_pred HHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC---------CcEEEeCCHHHHHHHHHHhccccc
Q psy15216 12 RVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP---------REIIWTSGATESNNLAIKGAAHFY 82 (2602)
Q Consensus 12 ~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~---------~~Iv~t~g~T~al~~~~~~l~~~~ 82 (2602)
.+.+++..++ |+....+..+.....+.+++++++++++|++. .++++|+|+|+|+..++.++....
T Consensus 89 ~~~~~~~~~~-----n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~ 163 (486)
T 1js3_A 89 MLADMLCGAI-----GCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKV 163 (486)
T ss_dssp HHHHHHHHHH-----CCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-----CcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHH
Confidence 3455555554 33333344555566777889999999999974 358999999999999998875221
Q ss_pred cc-----CC---------C-EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCce------EEE
Q psy15216 83 KK-----RG---------K-HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTI------LVS 141 (2602)
Q Consensus 83 ~~-----~g---------d-~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tk------lv~ 141 (2602)
.+ .| + .|+++.++|+++..++..+ |++++.+++++++.+|+++|+++|+++++ +|+
T Consensus 164 ~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~---G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv 240 (486)
T 1js3_A 164 VRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIG---GVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVV 240 (486)
T ss_dssp HHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHH---TCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhC---CCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEE
Confidence 11 03 2 4889999999998888877 99999999988899999999999987663 999
Q ss_pred EecccCcccccccHHHHHHHHHhcCCEEEEecccccccccc-cCCC-----CCccEEEeccccccC-CCCcEEEEEecCC
Q psy15216 142 VMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDI-NIQN-----YKVDLMSFSAHKIYG-PKGIGALYIRRNP 214 (2602)
Q Consensus 142 i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~-dl~~-----~~~D~~~~S~~K~~G-p~G~G~l~~~~~~ 214 (2602)
+++++|+||.+.|+++|+++|++||+++|+|++|+.+.... +... .++|++++|+||+++ |.|+|+++++++.
T Consensus 241 ~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~ 320 (486)
T 1js3_A 241 ATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRT 320 (486)
T ss_dssp EEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHH
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHH
Confidence 99999999999999999999999999999999998776432 1211 257999999999654 7789999997642
Q ss_pred --CCccc--c-eecCCCc----cccccc----cCcchhHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhhccCce
Q psy15216 215 --RTRIE--A-QIHGGGH----EYGLRS----GTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEI 280 (2602)
Q Consensus 215 --~~~l~--~-~~~g~~~----~~~~~~----gt~~~~~~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~ 280 (2602)
.+.+. + .+.+... ...+.. ++.. ....++.++++ +...++++..++..++++++.+.|.+ .|++
T Consensus 321 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr-~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~ 398 (486)
T 1js3_A 321 DLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRR-FRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQ-DPRF 398 (486)
T ss_dssp HHHGGGC------------CCSCCCGGGSSSCSCCC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CTTE
T ss_pred HHHHHhcCCchhhCCCcccccCCCCccccCCCCCCc-hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCe
Confidence 23331 1 1211110 000000 1111 13445556666 34567899999999999999999988 7899
Q ss_pred EEeCCCCCCCCceEEEEEcccC--hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec-CCCCC
Q psy15216 281 YINGDMNNRIPHNLNISFNFIE--GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTT 355 (2602)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~-~~~~t 355 (2602)
+++.++. ...+.|.++..+ ..++...| +|+.+..+..+ + ..+++|+++ ++++|
T Consensus 399 ~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--------------~-----~~~~lRi~~~~~~~t 456 (486)
T 1js3_A 399 EVCAEVT---LGLVCFRLKGSDGLNEALLERINSARKIHLVPCRL--------------R-----GQFVLRFAICSRKVE 456 (486)
T ss_dssp EECSCCC---SSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEE--------------T-----TEEEEEEECCCTTCC
T ss_pred EEeCCCc---eeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEE--------------C-----CEEEEEEEeCCCCCC
Confidence 9986432 345556665322 34566655 45432221111 1 126899997 67899
Q ss_pred HHHHHHHHHHHHhh
Q psy15216 356 EKEIDFTIKLLKMK 369 (2602)
Q Consensus 356 ~edid~li~~L~~~ 369 (2602)
.+|+++++++|++.
T Consensus 457 ~~di~~~~~~l~~~ 470 (486)
T 1js3_A 457 SGHVRLAWEHIRGL 470 (486)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
No 259
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.88 E-value=5.3e-22 Score=261.79 Aligned_cols=320 Identities=15% Similarity=0.127 Sum_probs=232.4
Q ss_pred CCCCHHHHHHHHHHHhhc---cCCCCCccchhHHHHHHHHHHHHHHHHHHh----C--CCC-CcEEEeCCHHHHHHHHHH
Q psy15216 1403 TPIDPRVVDKMIPYLRVQ---FGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADP-REIIWTSGATESNNLAIK 1472 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~---~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g--~~~-~~iv~t~gaT~al~~al~ 1472 (2602)
.++++.+.+++.+.+... ..++.. . ...++|+.+++++ | +++ ++|++|+|+++|++.++.
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~~~~y~~~------~----g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~ 109 (422)
T 3fvs_A 40 FPPPDFAVEAFQHAVSGDFMLNQYTKT------F----GYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQ 109 (422)
T ss_dssp SCCCHHHHHHHHHHHHSCGGGGSCCCT------T----CCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCCCccCCCCCC------C----CCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHH
Confidence 367889999999988752 223221 0 1234555555555 4 456 689999999999999999
Q ss_pred hhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC------------CCCcChhHHHhhccCCceEEEEec
Q psy15216 1473 GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN------------NGLITLSQLEEKICSDTILVSVML 1540 (2602)
Q Consensus 1473 ~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~------------~~~id~d~l~~~i~~~t~lv~l~~ 1540 (2602)
++. ++||+|+++.|.|+++...+... |.+++.++.++ ++.+|++++++++++++++|++++
T Consensus 110 ~~~----~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~ 182 (422)
T 3fvs_A 110 ALV----DEGDEVIIIEPFFDCYEPMTMMA---GGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNT 182 (422)
T ss_dssp HHC----CTTCEEEEEESCCTTHHHHHHHT---TCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEES
T ss_pred HHc----CCCCEEEEcCCCchhhHHHHHHc---CCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECC
Confidence 986 89999999999999987766554 99999998875 346899999999999999999999
Q ss_pred cccccccccC---hHHHHHHhhhcCCEEEEeccccc----CcccccCCC----CCccEEEEccccccCCCc--eEEEEEe
Q psy15216 1541 VNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAV----GKIDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIR 1607 (2602)
Q Consensus 1541 ~~n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~----g~~~~~l~~----~~~D~~v~S~~K~~gp~G--~G~l~~~ 1607 (2602)
|+||||.++| +++|.++|++||+++|+|++|+. +..+.++.. .+.++++.|+||.+|++| +||++++
T Consensus 183 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~ 262 (422)
T 3fvs_A 183 PNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGP 262 (422)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECC
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeC
Confidence 9999999995 88999999999999999999975 222222221 245688899999888777 8999998
Q ss_pred cCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeC
Q psy15216 1608 RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-------ARIEMKEELKRILFLQKRLYNGLMESIEEIYING 1680 (2602)
Q Consensus 1608 ~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~-------~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~ 1680 (2602)
+++++.+..... ....+.+...+.++.++++. ....+++.++++.++++++.+.|.+ . ++.+..
T Consensus 263 ~~~~~~~~~~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~ 333 (422)
T 3fvs_A 263 DHIMKHLRTVHQ-------NSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQS-V-GLKPII 333 (422)
T ss_dssp HHHHHHHHHHHH-------TTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHT-T-TCEEEB
T ss_pred HHHHHHHHHHHh-------hccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHH-c-CCeecC
Confidence 776655543221 12335566677777677763 2345778889999999999999987 3 777654
Q ss_pred CCCCCCCceEEEEEecC----C----------cHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEE
Q psy15216 1681 DMNNRIPHNLNISFNFI----E----------GESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 1743 (2602)
Q Consensus 1681 ~~~~~~~~~~~~~~~~~----~----------~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 1743 (2602)
+... ....+.++.. + ..++...+ +||.+.+|..|... . ......+++|
T Consensus 334 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~--------~----~~~~~~~~iR 398 (422)
T 3fvs_A 334 PQGS---YFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSV--------P----HQKHFDHYIR 398 (422)
T ss_dssp CSBS---SEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCH--------H----HHTTSCSEEE
T ss_pred CCee---eEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCC--------c----CCCCCCCeEE
Confidence 4322 2223333221 1 23455443 69999999988642 0 0012248999
Q ss_pred EecCCCCCHHHHHHHHHHHHHh
Q psy15216 1744 FTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1744 ls~~~~~t~edid~li~~L~~~ 1765 (2602)
||++. +.+++++++++|++.
T Consensus 399 is~~~--~~e~i~~~l~~l~~~ 418 (422)
T 3fvs_A 399 FCFVK--DEATLQAMDEKLRKW 418 (422)
T ss_dssp EECCC--CHHHHHHHHHHHHHH
T ss_pred EEecC--CHHHHHHHHHHHHHH
Confidence 99886 999999999999873
No 260
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.88 E-value=5.6e-21 Score=255.81 Aligned_cols=312 Identities=16% Similarity=0.203 Sum_probs=224.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHhccccc----------ccCCCEEEEcCCCCcccH
Q psy15216 33 HIYGWTAEKAIEKARNEVAQLIYAD--PREIIWTSGATESNNLAIKGAAHFY----------KKRGKHIITVQTEHKSVL 100 (2602)
Q Consensus 33 ~~~~~~~~~~~~~~r~~lA~~~g~~--~~~Iv~t~g~T~al~~~~~~l~~~~----------~~~gd~Vlv~~~~~~s~~ 100 (2602)
|..+.....+.+++++++++++|.+ ++.++|++|+|+|+..++.++.... ..++++|+++...|+++.
T Consensus 127 ~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~ 206 (511)
T 3vp6_A 127 YEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK 206 (511)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHH
T ss_pred cccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHH
Confidence 4445566677888999999999997 4689999999999999988876321 015789999999999998
Q ss_pred HHHHHHHhCCc---EEEEeccCCCCccChHHHHhhccCC------ceEEEEecccCcccccccHHHHHHHHHhcCCEEEE
Q psy15216 101 DSIRKLENDGF---RVTYLKPKNNGLITLSQLEEKICSD------TILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHC 171 (2602)
Q Consensus 101 ~~~~~~~~~G~---~v~~v~~~~~~~ld~e~l~~~i~~~------tklv~i~~~~npTG~~~~l~~I~~la~~~g~~liv 171 (2602)
.++..+ |+ +++.+++++++.+|+++|+++|+++ +++|++++++|+||.+.|+++|+++|++||+|+|+
T Consensus 207 ~~~~~~---g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhv 283 (511)
T 3vp6_A 207 KAGAAL---GFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHV 283 (511)
T ss_dssp HHHHHT---TSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHc---CCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEE
Confidence 888776 66 8999999989999999999999765 89999999999999999999999999999999999
Q ss_pred ecccccccccc-----cCCC-CCccEEEeccccc-cCCCCcEEEEEecCC-CCccc----ceecCCCc---------ccc
Q psy15216 172 DAAQAVGKIDI-----NIQN-YKVDLMSFSAHKI-YGPKGIGALYIRRNP-RTRIE----AQIHGGGH---------EYG 230 (2602)
Q Consensus 172 D~a~a~g~~~~-----dl~~-~~~D~~~~S~~K~-~Gp~G~G~l~~~~~~-~~~l~----~~~~g~~~---------~~~ 230 (2602)
|++|+.+.... .+.. .++|++++++||+ ++|.|+|+++++++. ..... +++..... ...
T Consensus 284 D~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 363 (511)
T 3vp6_A 284 DAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKA 363 (511)
T ss_dssp EETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGS
T ss_pred EccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCC
Confidence 99999877632 2221 2579999999995 568899999998652 22211 11111000 001
Q ss_pred ccccCcchhHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--cC-----
Q psy15216 231 LRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IE----- 302 (2602)
Q Consensus 231 ~~~gt~~~~~~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~--~~----- 302 (2602)
+..+ .+ ...+++.++++ +..+++++..++..++++++.+.|.+ .|+++++.+..... ..+.|.+.. .+
T Consensus 364 ~~~~-r~-~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~-~pg~~l~~~~~p~~-~~v~f~~~p~~~~~~~~~ 439 (511)
T 3vp6_A 364 IQCG-RH-VDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKN-REEFEMVFNGEPEH-TNVCFWYIPQSLRGVPDS 439 (511)
T ss_dssp SCSS-CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTEEESSSSCCSS-SCEEEEECCGGGSSCCCC
T ss_pred CCCC-Cc-hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEecCCCCe-EEEEEEEeCccccccccc
Confidence 1111 11 23455666777 44577899999999999999999987 78999986312222 234444321 11
Q ss_pred ----------hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec-CCCCCHHHHHHHHHHHHhh
Q psy15216 303 ----------GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 303 ----------~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~-~~~~t~edid~li~~L~~~ 369 (2602)
..++.+.| +|+.+.... .... ..+++|+++ +++++.+||++++++|++.
T Consensus 440 ~~~~~~l~~~~~~l~~~L~~~G~~~~~~~-~~~~-----------------~~~~lRi~~~~~~~t~~di~~ll~~i~~~ 501 (511)
T 3vp6_A 440 PQRREKLHKVAPKIKALMMESGTTMVGYQ-PQGD-----------------KANFFRMVISNPAATQSDIDFLIEEIERL 501 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCEEEEE-EETT-----------------EEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCEEEEEE-EeCC-----------------ceEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 11344445 454332110 0000 015799999 7999999999999999974
No 261
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.88 E-value=2.1e-22 Score=262.95 Aligned_cols=303 Identities=12% Similarity=0.091 Sum_probs=212.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHH-HhCCcEEEEec
Q psy15216 1435 AEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLK 1513 (2602)
Q Consensus 1435 ~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~ 1513 (2602)
......++++++++++|.+ +.++++++++|++.++.++. ++||+|+++.+.|+++...+..+ ...|.+++.++
T Consensus 62 ~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~----~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 135 (398)
T 2rfv_A 62 GNPTTDALEKKLAVLERGE--AGLATASGISAITTTLLTLC----QQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVD 135 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC----CTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred CChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeC
Confidence 3456889999999999976 66777778899999999986 79999999999999988776332 45699999998
Q ss_pred cCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccc
Q psy15216 1514 PKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAH 1593 (2602)
Q Consensus 1514 ~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~ 1593 (2602)
.+ |+++++++++++|++|++++|+||||.++|+++|.++|++||+++|+|++|+.+.....+ .+++|+++.|+|
T Consensus 136 ~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~di~~~s~s 209 (398)
T 2rfv_A 136 AA-----KPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPL-QLGADIVVHSVT 209 (398)
T ss_dssp TT-----SHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GGTCSEEEEETT
T ss_pred CC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCcEEEEeCc
Confidence 64 899999999999999999999999999999999999999999999999999877653322 357899999999
Q ss_pred cccC-CCc--eEEEEEecCCCC-ccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 1594 KIYG-PKG--IGALYIRRNPRT-RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGL 1669 (2602)
Q Consensus 1594 K~~g-p~G--~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L 1669 (2602)
|+++ |.+ .|+++++++.++ .+.+...+ ++.++.+....+++.++++..... .++..+.++++.+.|
T Consensus 210 K~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~l~~~l 279 (398)
T 2rfv_A 210 KYINGHGDVIGGIIVGKQEFIDQARFVGLKD------ITGGCMSPFNAWLTLRGVKTLGIR----MERHCENALKIARFL 279 (398)
T ss_dssp TTTTCSSCCCCEEEEECHHHHHHHHHTHHHH------TTCCCCCHHHHHHHHHHHTTHHHH----HHHHHHHHHHHHHHH
T ss_pred ccccCCCCceEEEEEECHHHHHHHHHHHHHh------CCCCCCCHHHHHHHHhhhhhHHHH----HHHHHHHHHHHHHHH
Confidence 9664 444 499999986654 34433211 113456666666666666533322 333444555666666
Q ss_pred hhcCCcEE--------------EeCCCCCCCCceEEEEEecC--CcHHHHHhc--CCEEEccccccC------CCC--CC
Q psy15216 1670 MESIEEIY--------------INGDMNNRIPHNLNISFNFI--EGESLLMAI--KDIAVSSGSACT------SAS--LE 1723 (2602)
Q Consensus 1670 ~~~~~gl~--------------i~~~~~~~~~~~~~~~~~~~--~~~~~~~~L--~gI~v~~g~~~~------~~~--~~ 1723 (2602)
.+ .+.+. +..+.......+..+.++.. ....++..+ .++.++.|..+. ... ..
T Consensus 280 ~~-~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~ 358 (398)
T 2rfv_A 280 EG-HPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPV 358 (398)
T ss_dssp HT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSS
T ss_pred Hc-CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHHhCCcceeccCCCCcceeeecccccccccC
Confidence 55 33222 11110011234444555421 223444444 477777775432 100 11
Q ss_pred hhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1724 PSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1724 ~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
+.......|.. .++||||++..++++++++++++|++
T Consensus 359 ~~~~~~~~g~~----~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 359 APEERLKAGIT----DGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp CHHHHHHTTCC----TTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred CHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 23333445543 38999999999999999999999986
No 262
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.88 E-value=6.3e-22 Score=258.03 Aligned_cols=329 Identities=14% Similarity=0.167 Sum_probs=234.5
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
..++.+.+++.+.+...+.++. + +..+++|+++|+++|. +++++++|+|+|+++++.++. +++||
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~------g----~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~~~~l~---~~~gd 73 (394)
T 1o69_A 9 HMGGNELKYIEEVFKSNYIAPL------G----EFVNRFEQSVKDYSKS--ENALALNSATAALHLALRVAG---VKQDD 73 (394)
T ss_dssp ---CCHHHHHHHHHHHTTTSCT------T----HHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTT---CCTTC
T ss_pred CCCHHHHHHHHHHHHcCCccCC------C----hHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcC---CCCCC
Confidence 3456788889888865322211 1 3578899999999997 589999999999999999982 27999
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC---CceEEEEecccCcccccccHHHHHHHHHh
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQPILEIGELCRS 164 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~---~tklv~i~~~~npTG~~~~l~~I~~la~~ 164 (2602)
+|+++.++|+++...+... |++++.+++++++.+|+++|++++++ ++++|++++ |||...|+++|.++|++
T Consensus 74 ~Vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~ 147 (394)
T 1o69_A 74 IVLASSFTFIASVAPICYL---KAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKE 147 (394)
T ss_dssp EEEEESSSCGGGTHHHHHT---TCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHH
T ss_pred EEEECCCccHHHHHHHHHc---CCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHH
Confidence 9999999999998887765 99999999987888999999999976 799999986 79999999999999999
Q ss_pred cCCEEEEecccccccccccCC--C-CCccEEEeccccccCCCCcEEEEEe-cCCCCcccceecCCC--------cccccc
Q psy15216 165 KGVIFHCDAAQAVGKIDINIQ--N-YKVDLMSFSAHKIYGPKGIGALYIR-RNPRTRIEAQIHGGG--------HEYGLR 232 (2602)
Q Consensus 165 ~g~~livD~a~a~g~~~~dl~--~-~~~D~~~~S~~K~~Gp~G~G~l~~~-~~~~~~l~~~~~g~~--------~~~~~~ 232 (2602)
+|+++|+|++|+.|....+.. . .++|++++|.||.+++.++|+++++ +++++.+.+....+. ...++.
T Consensus 148 ~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~ 227 (394)
T 1o69_A 148 NDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYN 227 (394)
T ss_dssp TTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCB
T ss_pred cCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcc
Confidence 999999999999765432211 1 2467888888998887789999996 566666554322211 112333
Q ss_pred ccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCC--CCCceEEEEEcc----------
Q psy15216 233 SGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN--RIPHNLNISFNF---------- 300 (2602)
Q Consensus 233 ~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~--~~~~~~~~~~~~---------- 300 (2602)
.++++..+.+++.. ++ .+++..++.+++++++.+.|.+ . ++++++... ...+++.+.++.
T Consensus 228 ~~~~~~~aa~~l~~-l~----~l~~~~~~~~~~~~~l~~~L~~-~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 299 (394)
T 1o69_A 228 YRLSNVLGAIGVAQ-ME----VLEQRVLKKREIYEWYKEFLGE-Y--FSFLDELENSRSNRWLSTALINFDKNELNACQK 299 (394)
T ss_dssp CBCCHHHHHHHHHH-HT----THHHHHHHHHHHHHHHHHHHTT-T--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCE
T ss_pred cCcCHHHHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHhcc-c--ccccCCCCCCcceeEEEEEEecchhhccccccc
Confidence 44566555554422 33 3566788899999999999977 3 665544221 112245566652
Q ss_pred ------------cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHH-----cCCCccCCCCeEEEecCCCCCHHHHHH
Q psy15216 301 ------------IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRA-----LGCNDELAHSSIRFTIGRFTTEKEIDF 361 (2602)
Q Consensus 301 ------------~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~-----~g~~~~~~~~~iRis~~~~~t~edid~ 361 (2602)
.+..++.+.| +||.++++..|... +|.+ .. +.+.++...+.+|++++.++|++|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~--~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~ 375 (394)
T 1o69_A 300 DINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHT--QEVF--KGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYE 375 (394)
T ss_dssp EEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGG--CGGG--TTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHH
T ss_pred cccccccccccccCHHHHHHHHHHcCCcccccCCcccc--chhh--hccCCCCChHHHHHhcCeEEccCCCCCCHHHHHH
Confidence 1455677766 79999988544211 1111 11 111111222567887899999999999
Q ss_pred HHHHHHhh
Q psy15216 362 TIKLLKMK 369 (2602)
Q Consensus 362 li~~L~~~ 369 (2602)
++++|++.
T Consensus 376 ~~~~l~~~ 383 (394)
T 1o69_A 376 ISKLILKS 383 (394)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999964
No 263
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.88 E-value=1.7e-21 Score=254.69 Aligned_cols=322 Identities=11% Similarity=0.003 Sum_probs=232.5
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhC---CCCC-cEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY---ADPR-EIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g---~~~~-~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
.+.++.+.+++.+.++....++.... ..++.+++.+.+.+.+| ++++ +|++|+|+++|++.++.++.
T Consensus 42 ~~~~~~v~~a~~~~~~~~~~y~~~~g------~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~--- 112 (396)
T 3jtx_A 42 HPTPKVITDALTASLHELEKYPLTAG------LPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVL--- 112 (396)
T ss_dssp SCCCHHHHHHHHHTGGGGGSCCCTTC------CHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHC---
T ss_pred CCCCHHHHHHHHHHhhhccCCCCCCC------cHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHh---
Confidence 45678999999998876555554311 12234444444444557 4588 99999999999999999987
Q ss_pred ccCC-----CEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC-CCcChhHHHhhccCCceEEEEeccccccccccChH
Q psy15216 1479 KKRG-----KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPIL 1552 (2602)
Q Consensus 1479 ~~~g-----d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~ 1552 (2602)
++| |+|+++.|+|+++...+..+ |++++.++.+.+ +.+|+++|++++++++++|++++|+||||.++|.+
T Consensus 113 -~~g~~~~~d~vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 188 (396)
T 3jtx_A 113 -NPVSDGIKPAIVSPNPFYQIYEGATLLG---GGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLD 188 (396)
T ss_dssp -CC---CCCCEEEEEESCCHHHHHHHHHT---TCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHH
T ss_pred -CCCCccCCCEEEEcCCCcHhHHHHHHHc---CCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHH
Confidence 786 79999999999887765554 999999998654 45899999999999999999999999999999955
Q ss_pred H---HHHHhhhcCCEEEEecccccCcc----cccC--------CCCCccEEEEccccccCCCc--eEEEEEecCCCCccc
Q psy15216 1553 E---IGELCRSKGVIFHCDAAQAVGKI----DINI--------QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIE 1615 (2602)
Q Consensus 1553 ~---I~~ia~~~gi~vivD~a~~~g~~----~~~l--------~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~ 1615 (2602)
+ |+++|++||+++|+|++|+.... +... ...+.++++.|+||.+|++| +||++.++++++.+.
T Consensus 189 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (396)
T 3jtx_A 189 GWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFL 268 (396)
T ss_dssp HHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHH
Confidence 5 89999999999999999875321 2211 02467799999999877777 799998877666554
Q ss_pred cccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe
Q psy15216 1616 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN 1695 (2602)
Q Consensus 1616 ~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~ 1695 (2602)
... ....++++...+.++.++++. ...+.+.++++.++++++.+.|.+ .. .+..+ . ......+.++
T Consensus 269 ~~~-------~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~-~~--~~~~~-~--~~~~~~~~~~ 334 (396)
T 3jtx_A 269 LYR-------TYHGSAMSIPVQRASIAAWDD-EQHVIDNRRLYQEKFERVIPILQQ-VF--DVKLP-D--ASFYIWLKVP 334 (396)
T ss_dssp HHH-------HHHTCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHTT-TS--CCCCC-S--SSSEEEEECT
T ss_pred HHH-------hhcccCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHh-cC--CccCC-C--eeEEEEEECC
Confidence 332 112346677777777777763 345678888889999999999976 21 12212 1 1223334444
Q ss_pred cCCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1696 FIEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1696 ~~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
..+..++...| +||.+.+|..|.... .......+++||+++. +.+++++++++|++
T Consensus 335 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~-----------~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~ 393 (396)
T 3jtx_A 335 DGDDLAFARNLWQKAAIQVLPGRFLARDT-----------EQGNPGEGYVRIALVA--DVATCVKAAEDIVS 393 (396)
T ss_dssp TSCHHHHHHHHHHHHCEECEEGGGGCCCC-----------TTCCTTTTEEEEECCS--CHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCEEEeCChHhCCcc-----------cccCCCCCeEEEEEcC--CHHHHHHHHHHHHH
Confidence 43556666655 599999999886520 0011234899999985 89999999999986
No 264
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.88 E-value=6.7e-21 Score=255.12 Aligned_cols=329 Identities=16% Similarity=0.168 Sum_probs=232.5
Q ss_pred CHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHhhhhhhc----
Q psy15216 1406 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PREIIWTSGATESNNLAIKGAAHFYK---- 1479 (2602)
Q Consensus 1406 ~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~--~~~iv~t~gaT~al~~al~~l~~~~~---- 1479 (2602)
+..+.+++...+.. ....|..+....++.+++++++++++|.+ ++.++||+|+|+|+..++.++.....
T Consensus 109 ~~~~~e~l~~~~~~-----~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 183 (511)
T 3vp6_A 109 IGLAGEWLTSTANT-----NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVK 183 (511)
T ss_dssp HHHHHHHHHHHHCC-----CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHH
T ss_pred HHHHHHHHHHHhcc-----CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhh
Confidence 33445666665532 22234556677788899999999999997 46899999999999999888763210
Q ss_pred ------cCCCEEEEcCCCCcchHHHHHHHHhCCc---EEEEeccCCCCCcChhHHHhhccCC------ceEEEEeccccc
Q psy15216 1480 ------KRGKHIITVQTEHKSVLDSIRKLENDGF---RVTYLKPKNNGLITLSQLEEKICSD------TILVSVMLVNNE 1544 (2602)
Q Consensus 1480 ------~~gd~Vlv~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~~~~id~d~l~~~i~~~------t~lv~l~~~~n~ 1544 (2602)
.+++.|+++.+.|+++...+..+ |+ +++.++.+.++.+|+++|+++|+++ |++|++++++|+
T Consensus 184 ~~G~~~~~~~~v~~s~~~H~s~~~~~~~~---g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~ 260 (511)
T 3vp6_A 184 TKGMAAVPKLVLFTSEQSHYSIKKAGAAL---GFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTV 260 (511)
T ss_dssp HHCGGGSCCEEEEEETTSCTHHHHHHHHT---TSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSS
T ss_pred hcCcccCCCeEEEECCCchHHHHHHHHHc---CCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCC
Confidence 15789999999999998888776 65 8999999988999999999999865 889999999999
Q ss_pred cccccChHHHHHHhhhcCCEEEEecccccCccccc-----CCC-CCccEEEEcccc-ccCCCceEEEEEecCC-CCcc--
Q psy15216 1545 IGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN-----IQN-YKVDLMSFSAHK-IYGPKGIGALYIRRNP-RTRI-- 1614 (2602)
Q Consensus 1545 tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~-----l~~-~~~D~~v~S~~K-~~gp~G~G~l~~~~~~-~~~l-- 1614 (2602)
||.+.|+++|+++|++||+|+|+|++|+.+....+ +.. .++|++++++|| +++|.|+|+++++++. ....
T Consensus 261 ~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~ 340 (511)
T 3vp6_A 261 YGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQ 340 (511)
T ss_dssp SCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHC
T ss_pred CcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhc
Confidence 99999999999999999999999999998776321 221 257999999999 5578899999998753 2221
Q ss_pred -cc-ccccCCc---------cccCCCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC
Q psy15216 1615 -EA-QIHGGGH---------EYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDM 1682 (2602)
Q Consensus 1615 -~~-~~~g~~~---------~~~~~~gt~~~~~~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~ 1682 (2602)
.+ .+..... ...+. ++... ...++..++. +...+++++.++..++++++.+.|.+ .|++++..+.
T Consensus 341 ~~~~yl~~~~~~~~~~~~~~~~~~~-~~r~~-~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~-~pg~~l~~~~ 417 (511)
T 3vp6_A 341 MHASYLFQQDKHYDVSYDTGDKAIQ-CGRHV-DIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKN-REEFEMVFNG 417 (511)
T ss_dssp CCCTTTCCSSCSSCGGGCCGGGSSC-SSCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTEEESSSS
T ss_pred cCCccccCcccccccccCccCCCCC-CCCch-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEecC
Confidence 11 1111100 01111 12222 3445556676 45567899999999999999999987 7899998631
Q ss_pred CCCCCceEEEEEec--CC---------------cHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEE
Q psy15216 1683 NNRIPHNLNISFNF--IE---------------GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 1743 (2602)
Q Consensus 1683 ~~~~~~~~~~~~~~--~~---------------~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 1743 (2602)
.... ....|.+.. .+ ..++...| +|+.+... .+... ..+++|
T Consensus 418 ~p~~-~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~-~~~~~-----------------~~~~lR 478 (511)
T 3vp6_A 418 EPEH-TNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGY-QPQGD-----------------KANFFR 478 (511)
T ss_dssp CCSS-SCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEE-EEETT-----------------EEEEEE
T ss_pred CCCe-EEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEE-EEeCC-----------------ceEEEE
Confidence 2222 234444321 11 11344444 45332211 11000 125799
Q ss_pred Eec-CCCCCHHHHHHHHHHHHH
Q psy15216 1744 FTI-GRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1744 ls~-~~~~t~edid~li~~L~~ 1764 (2602)
+++ ++.+|.+||++++++|++
T Consensus 479 i~~~~~~~t~~di~~ll~~i~~ 500 (511)
T 3vp6_A 479 MVISNPAATQSDIDFLIEEIER 500 (511)
T ss_dssp ECCCCTTCCHHHHHHHHHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHH
Confidence 998 789999999999999997
No 265
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.88 E-value=1.2e-21 Score=259.34 Aligned_cols=289 Identities=18% Similarity=0.222 Sum_probs=214.0
Q ss_pred HHHHHHHHHHHhC--------CCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEE
Q psy15216 43 IEKARNEVAQLIY--------ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVT 114 (2602)
Q Consensus 43 ~~~~r~~lA~~~g--------~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~ 114 (2602)
.+++|++++++++ +++++|++++|+++|+..++.++. ++||.|+++.+.|+++...+. ...|++++
T Consensus 88 ~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~----~~gd~vl~~~p~~~~~~~~~~--~~~g~~~~ 161 (435)
T 3piu_A 88 LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLA----DPGEAVLIPTPYYPGFDRDLK--WRTGVEIV 161 (435)
T ss_dssp CHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHC----CTTCEEEEEESCCTTHHHHTT--TTTCCEEE
T ss_pred cHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhc----CCCCeEEECCCccccHHHHHH--HhcCCEEE
Confidence 4678888888887 678899999999999999999987 899999999999999876554 13599999
Q ss_pred EeccCC--CCccChHHHHhhccC------CceEEEEecccCcccccccH---HHHHHHHHhcCCEEEEecccccccc---
Q psy15216 115 YLKPKN--NGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPI---LEIGELCRSKGVIFHCDAAQAVGKI--- 180 (2602)
Q Consensus 115 ~v~~~~--~~~ld~e~l~~~i~~------~tklv~i~~~~npTG~~~~l---~~I~~la~~~g~~livD~a~a~g~~--- 180 (2602)
.++.++ ++.+|+++|++++++ ++++|++++|+||||.++|. ++|.++|++||+++|+|++|+.+..
T Consensus 162 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~ 241 (435)
T 3piu_A 162 PIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP 241 (435)
T ss_dssp EEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSS
T ss_pred EeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Confidence 999875 356899999999975 89999999999999999885 6788889999999999999975321
Q ss_pred -cccCC----C---------CCccEEEeccccccCCCC--cEEEEEec-CCCCcccceecCCCccccccccCcchhHHHH
Q psy15216 181 -DINIQ----N---------YKVDLMSFSAHKIYGPKG--IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVG 243 (2602)
Q Consensus 181 -~~dl~----~---------~~~D~~~~S~~K~~Gp~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~a 243 (2602)
...+. + .+..+++.|+||.+|++| +|++++++ .+.+.+.... ..++.+.+...+
T Consensus 242 ~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 312 (435)
T 3piu_A 242 SFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS---------SFGLVSSQTQHL 312 (435)
T ss_dssp CCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHG---------GGSCCCHHHHHH
T ss_pred CCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHh---------hcCCCCHHHHHH
Confidence 11111 1 122388899999888777 79999854 3433333211 123445555555
Q ss_pred HHHHHH---HHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEccc-------ChhHHHHHh--C
Q psy15216 244 MGEAFR---LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-------EGESLLMAI--K 311 (2602)
Q Consensus 244 l~~al~---~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~L--~ 311 (2602)
+.++++ +...+.++.++++.++++++.+.|.+ .++.+..+.. ..+..+.++.. +..++...| +
T Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~---g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 387 (435)
T 3piu_A 313 LSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK--SGISCLNGNA---GLFCWVDMRHLLRSNTFEAEMELWKKIVYE 387 (435)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TTCEECCCCS---SSEEEEECGGGSSSSSHHHHHHHHHHHHHT
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccCCCe---eEEEEEEcccccccCCchhHHHHHHHHHHH
Confidence 555665 22345677888889999999999987 3777764432 23444455432 233555555 4
Q ss_pred -CeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 312 -DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 312 -gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
||.+++|..|.+. ..+++||+++.. +++++++++++|++.
T Consensus 388 ~gi~v~~g~~~~~~-----------------~~~~iRi~~~~~-~~e~i~~~l~~l~~~ 428 (435)
T 3piu_A 388 VHLNISPGSSCHCT-----------------EPGWFRVCFANL-PERTLDLAMQRLKAF 428 (435)
T ss_dssp SCEECEEGGGGTCS-----------------STTEEEEECSSS-CHHHHHHHHHHHHHH
T ss_pred CCEEEeCCcccCCC-----------------CCCEEEEEeeCC-CHHHHHHHHHHHHHH
Confidence 9999998877542 138999999765 999999999999864
No 266
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.87 E-value=6.3e-22 Score=251.87 Aligned_cols=296 Identities=15% Similarity=0.096 Sum_probs=202.8
Q ss_pred HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHH-HHhCCcEEEEeccCCCCC
Q psy15216 1441 KARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKPKNNGL 1519 (2602)
Q Consensus 1441 ~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~~~~~~ 1519 (2602)
++++.+++++|++ +.++++++|+|++.++.++. ++||+|++++++|+++...+.. +...|+++++++.
T Consensus 2 ~l~~~la~~~g~~--~~i~~~sG~~a~~~~~~~~~----~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----- 70 (331)
T 1pff_A 2 ALEGKIAKLEHAE--ACAATASGMGAIAASVWTFL----KAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM----- 70 (331)
T ss_dssp HHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC----CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----
T ss_pred hHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhc----CCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----
Confidence 5789999999986 44555556999999999886 7999999999999998777654 3456999999875
Q ss_pred cChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhh-cCCEEEEecccccCcccccCCCCCccEEEEccccccC-
Q psy15216 1520 ITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS-KGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG- 1597 (2602)
Q Consensus 1520 id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~-~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~g- 1597 (2602)
.|+++++++++++|++|++++++||||.+.|+++|.++|++ ||+++|+|++|+.|....++ ++++|++++|+||++|
T Consensus 71 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~d~~~~s~~K~~~~ 149 (331)
T 1pff_A 71 AVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL-DLGVDIVVHSATKYING 149 (331)
T ss_dssp TSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG-GGTCSEEEEETTTTTSS
T ss_pred CCHHHHHHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh-hcCCcEEEEECccccCC
Confidence 48899999999999999999999999999999999999999 99999999999887654444 4678999999999655
Q ss_pred CCc--eEEEEEec-CCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Q psy15216 1598 PKG--IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES-- 1672 (2602)
Q Consensus 1598 p~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~-- 1672 (2602)
|.+ +|++++++ ++++.+.+...++ ..++.+....+++..+++......+.. ....+.+.+.+.+.
T Consensus 150 ~~~r~~G~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~l~~~~~ 219 (331)
T 1pff_A 150 HTDVVAGLVCSRADIIAKVKSQGIKDI------TGAIISPHDAWLITRGTLTLDMRVKRA----AENAQKVAEFLHEHKA 219 (331)
T ss_dssp SSSCCCEEEEECHHHHHHHHHTCCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHCTT
T ss_pred CCCceEEEEEeCcHHHHHHHHHHHHhh------cCCCCCHHHHHHHHcCcchHHHHHHHH----HHHHHHHHHHHHcCCC
Confidence 554 79999997 7666665544320 113445444444445555332222333 33333333443321
Q ss_pred -----------CCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEcccc---------ccCCC--CCChhHHH
Q psy15216 1673 -----------IEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGS---------ACTSA--SLEPSYVL 1728 (2602)
Q Consensus 1673 -----------~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~---------~~~~~--~~~~~~~~ 1728 (2602)
.+++.+..+.....+.+..+.++ +...+...| .||.++..+ +|..+ ...+....
T Consensus 220 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~ 297 (331)
T 1pff_A 220 VKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEER 297 (331)
T ss_dssp CCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHH
T ss_pred eeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHH
Confidence 11222211111112334444433 445555554 688665442 33211 01223334
Q ss_pred HHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1729 RALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1729 ~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
..+|.+ .+++|+|++.++|.+++++++++|++
T Consensus 298 ~~~g~~----~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 298 EAAGLT----DNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp HHTTCC----TTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred HhcCCC----CCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 455654 38999999999999999999999985
No 267
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.87 E-value=4.5e-22 Score=215.31 Aligned_cols=125 Identities=43% Similarity=0.690 Sum_probs=120.4
Q ss_pred eeccccccceEEeeccEEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCCCCCcc
Q psy15216 2406 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 2485 (2602)
Q Consensus 2406 ~~d~~~~~~gi~~~~~~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~ 2485 (2602)
+.|++|+|||+++.+|.|.+||+||++||+++++.|+|..|||+.+.|.||||++..+.+|.+||+|.|+++||+|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCccEEEEEEeecCCcEEEEEEecCCCCChHHHhcc
Q psy15216 2486 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKNG 2530 (2602)
Q Consensus 2486 ~i~v~f~id~~g~l~V~a~~~~tg~~~~~~i~~~~~l~~~ei~~~ 2530 (2602)
+|+|+|+||.||+|+|+|.++.||++..++|...++||++||++.
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~Ls~~ei~~~ 126 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQIENM 126 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSSSSCHHHHHHH
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecCCCCCHHHHHHH
Confidence 999999999999999999999999999999999899999999963
No 268
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.87 E-value=3.7e-21 Score=253.45 Aligned_cols=295 Identities=12% Similarity=0.057 Sum_probs=218.6
Q ss_pred HHHHHHHHHHHHHhCCCC---------CcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCc
Q psy15216 41 KAIEKARNEVAQLIYADP---------REIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGF 111 (2602)
Q Consensus 41 ~~~~~~r~~lA~~~g~~~---------~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~ 111 (2602)
++.+.+.+++++.+|.+. ++|++|+|+++|+++++.++. ++||+|+++.|.|+++...++. .|+
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~~~---~g~ 154 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII----NPGDNVLLDEPAYSGTLQSLHP---LGC 154 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHC----CTTCEEEEESSCCHHHHHHHGG---GTC
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhC----CCCCEEEEeCCCcHHHHHHHHH---cCC
Confidence 345556666666678753 589999999999999999987 7999999999999997766544 499
Q ss_pred EEEEeccCCCCccChHHHHhhcc------------CCceEEEE-ecccCcccccccHH---HHHHHHHhcCCEEEEeccc
Q psy15216 112 RVTYLKPKNNGLITLSQLEEKIC------------SDTILVSV-MLVNNEIGVIQPIL---EIGELCRSKGVIFHCDAAQ 175 (2602)
Q Consensus 112 ~v~~v~~~~~~~ld~e~l~~~i~------------~~tklv~i-~~~~npTG~~~~l~---~I~~la~~~g~~livD~a~ 175 (2602)
+++.++.+++ .+|+++|+++++ +++++|++ ++++||||.++|.+ +|+++|++||+++|+|++|
T Consensus 155 ~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~ 233 (425)
T 2r2n_A 155 NIINVASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPY 233 (425)
T ss_dssp EEEEECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred EEEEeCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999998765 489999999986 46888876 79999999999866 8999999999999999999
Q ss_pred cc----ccccccC---CCCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHH
Q psy15216 176 AV----GKIDINI---QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGE 246 (2602)
Q Consensus 176 a~----g~~~~dl---~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~ 246 (2602)
+. +..+.++ ...+.++++.|+||.+| +| +||+++++++++.+..... ...++++.+...++.+
T Consensus 234 ~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~-------~~~~~~~~~~q~a~~~ 305 (425)
T 2r2n_A 234 YFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQ-------VSTLHPSTFNQLMISQ 305 (425)
T ss_dssp GGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHH-------TTTCSSCHHHHHHHHH
T ss_pred ccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHH-------HhcCCCCHHHHHHHHH
Confidence 73 2212222 22345688999999888 77 7999999887766654331 1234667777777777
Q ss_pred HHHHH-----HHhHHHHHHHHHHHHHHHHHHHhhccCceE-EeCCCCCCCCceEEEEEcc-cChhH-HHHHh--CCeEEc
Q psy15216 247 AFRLA-----RIEMKEELKRILFLQKRLYNGLMESIEEIY-INGDMNNRIPHNLNISFNF-IEGES-LLMAI--KDIAVS 316 (2602)
Q Consensus 247 al~~~-----~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~-l~~~~~~~~~~~~~~~~~~-~~~~~-~~~~L--~gI~v~ 316 (2602)
+|+.. ..++++.+++++++++++.+.|.+.++++. +..+.. ..++.+.++. .+..+ +...+ +||.++
T Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~ 382 (425)
T 2r2n_A 306 LLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAA---GMFLWIKVKGINDVKELIEEKAVKMGVLML 382 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSB---SSEEEEEETTCSCCHHHHHTHHHHTTEECE
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCc---eEEEEEEeCCCCCHHHHHHHHHHHCCcEEe
Confidence 77642 245677788888999999999987556763 443322 3345555654 34445 34445 799999
Q ss_pred ccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 317 SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+|..|... .....+++||+++. .+++++++++++|++.
T Consensus 383 pg~~f~~~--------------~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~ 420 (425)
T 2r2n_A 383 PGNAFYVD--------------SSAPSPYLRASFSS-ASPEQMDVAFQVLAQL 420 (425)
T ss_dssp EGGGGSSS--------------TTSCCCEEEEECSS-CCHHHHHHHHHHHHHH
T ss_pred chhhhcCC--------------CCCCCCEEEEEeCC-CCHHHHHHHHHHHHHH
Confidence 99877542 01123789999984 5999999999999864
No 269
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.87 E-value=2e-21 Score=252.15 Aligned_cols=313 Identities=12% Similarity=-0.022 Sum_probs=225.8
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCC--CCCcEEEeCCHHHHHHHHHHhhhhhhcc
Q psy15216 1403 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA--DPREIIWTSGATESNNLAIKGAAHFYKK 1480 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~--~~~~iv~t~gaT~al~~al~~l~~~~~~ 1480 (2602)
.+.++.+.+++.+.+.....++.... ..++.+++.+.+++.+|. ++++|++|+|+|+|++.++.++. +
T Consensus 35 ~~~~~~v~~a~~~~~~~~~~y~~~~g------~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~----~ 104 (376)
T 3ezs_A 35 FETPKFIQDALKNHTHSLNIYPKSAF------EESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVL----F 104 (376)
T ss_dssp SCCCHHHHHHHHTTGGGGGSCCCTTC------CHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHT----T
T ss_pred CCCCHHHHHHHHHhhhhcCCCCCCCC------CHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHc----C
Confidence 45678899999887754444443210 112333444444444487 77899999999999999999987 7
Q ss_pred C--CCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccC---hHHHH
Q psy15216 1481 R--GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIG 1555 (2602)
Q Consensus 1481 ~--gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l~~I~ 1555 (2602)
+ ||+|+++.|+|+++...+... |.+++.++.++++.+++ ++++++++++++|++++|+||||.++| +++|.
T Consensus 105 ~~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~-~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~ 180 (376)
T 3ezs_A 105 DYQNPTIAYPNPFYQIYEGAAKFI---KAKSLLMPLTKENDFTP-SLNEKELQEVDLVILNSPNNPTGRTLSLEELISWV 180 (376)
T ss_dssp TCSSCEEEEEESCCTHHHHHHHHT---TCEEEEEECCGGGTSCC-CCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred CCCCCEEEEecCCcHhHHHHHHHc---CCEEEEcccCCCCCcch-hHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHHH
Confidence 8 999999999999987765554 99999999887645555 777888888999999999999999999 66777
Q ss_pred HHhhhcCCEEEEecccccCcc---cccCC---------CCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccC
Q psy15216 1556 ELCRSKGVIFHCDAAQAVGKI---DINIQ---------NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 1621 (2602)
Q Consensus 1556 ~ia~~~gi~vivD~a~~~g~~---~~~l~---------~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~ 1621 (2602)
++|++||+++|+|++|+.... +.++. ..+.++++.|+||.+|++| +||++.++++++.+....
T Consensus 181 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~--- 257 (376)
T 3ezs_A 181 KLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFR--- 257 (376)
T ss_dssp HHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHH---
T ss_pred HHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHH---
Confidence 789999999999999975322 11111 3567799999999888777 799999877666654432
Q ss_pred CccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHH
Q psy15216 1622 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGES 1701 (2602)
Q Consensus 1622 ~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~ 1701 (2602)
....++.+...+.++.++++. ...+++.++++.++++++.+.|. ++. .+ . ......+.++ +..+
T Consensus 258 ----~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~----~~~--~~-~--~~~~~~~~~~--~~~~ 321 (376)
T 3ezs_A 258 ----AYLGYTSANAIQKASEAAWLD-DRHAEFFRNIYANNLKLARKIFK----NTL--IY-P--YSFYVYLPVQ--NGEN 321 (376)
T ss_dssp ----TTTCCCCCHHHHHHHHHHHHC-SHHHHHHHHHHHHHHHHHHHHST----TCC--CC-S--BSSEEEEECS--CHHH
T ss_pred ----hhhcCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHhc----CCC--CC-C--cceEEEEECC--CHHH
Confidence 122346677777777777764 23467788888888888888885 222 11 1 1222223333 5566
Q ss_pred HHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1702 LLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1702 ~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+...| +||.+++|..|... ....+++||+++. |.+++++++++|++.
T Consensus 322 ~~~~l~~~~gi~v~~g~~~~~~---------------~~~~~~iRis~~~--~~~~i~~~l~~l~~~ 371 (376)
T 3ezs_A 322 FAKTLYQNEGIITLPALYLGRN---------------RIGADYVRLALVY--DTPLLEKPLEIIETY 371 (376)
T ss_dssp HHHHHHHHHCCBCEEGGGGCST---------------TTTTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCcHHhCCC---------------CCCCCeEEEEEcC--CHHHHHHHHHHHHHH
Confidence 66555 59999999888631 0123899999984 999999999999873
No 270
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.87 E-value=1.8e-21 Score=257.44 Aligned_cols=316 Identities=15% Similarity=0.113 Sum_probs=224.1
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHh----CCCCCcEEEeCCHHHHHHHHHHhcccccc
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YADPREIIWTSGATESNNLAIKGAAHFYK 83 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~----g~~~~~Iv~t~g~T~al~~~~~~l~~~~~ 83 (2602)
+.|+.+.+++.+.+.... +.+. .+.++ ......++++++++++ ++++++|++|+|+++++.++ .++.
T Consensus 69 ~~~~~v~~a~~~~~~~~~-~~~~-~~~y~--~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~l-~~l~---- 139 (432)
T 3ei9_A 69 PIPEVITSAMAKKAHELS-TIEG-YSGYG--AEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRL-QVMF---- 139 (432)
T ss_dssp CCCHHHHHHHHHHHHHTT-STTT-CCCCC--CTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHHH----
T ss_pred CCCHHHHHHHHHHHhccc-ccCC-ccCCC--CCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHHH-HHHc----
Confidence 788999999999887532 1111 11111 1123456778888876 78888999999999999974 5655
Q ss_pred cCCCEEEEcCCCCcccHHHHHHHHhCC---------cEEEEeccCCC--CccChHHHHhhccCCceEEEEecccCccccc
Q psy15216 84 KRGKHIITVQTEHKSVLDSIRKLENDG---------FRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVI 152 (2602)
Q Consensus 84 ~~gd~Vlv~~~~~~s~~~~~~~~~~~G---------~~v~~v~~~~~--~~ld~e~l~~~i~~~tklv~i~~~~npTG~~ 152 (2602)
++||.|+++.|.|+++...+..+...| .+++.++.++. ...|++. .++++++++++|+||||.+
T Consensus 140 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~ 214 (432)
T 3ei9_A 140 GSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAA 214 (432)
T ss_dssp CTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCC
Confidence 799999999999999998888774433 35777776643 2344332 4689999999999999999
Q ss_pred cc---HHHHHHHHHhcCCEEEEeccccccc---ccccCCC----CCccEEEeccccccCCCC--cEEEEEecCCC-----
Q psy15216 153 QP---ILEIGELCRSKGVIFHCDAAQAVGK---IDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPR----- 215 (2602)
Q Consensus 153 ~~---l~~I~~la~~~g~~livD~a~a~g~---~~~dl~~----~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~----- 215 (2602)
+| +++|+++|++||+++|+|++|+... .+..+.. .+.++++.|+||.+|++| +||++++++++
T Consensus 215 ~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~ 294 (432)
T 3ei9_A 215 ATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGF 294 (432)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSC
T ss_pred CCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchH
Confidence 98 5566777999999999999998432 1222211 235688999999998888 79999998763
Q ss_pred ---CcccceecCCCccccccccCcchhHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCC
Q psy15216 216 ---TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIP 291 (2602)
Q Consensus 216 ---~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~ 291 (2602)
+.+.... ....++++.++..++.+++. ....++++..+++.++++++.+.|.+ . ++.+..+.. .
T Consensus 295 ~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~ 362 (432)
T 3ei9_A 295 PVAKDFNRII-------CTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTS-L-GYDVYGGKN---A 362 (432)
T ss_dssp BHHHHHHHHH-------HHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCEEECSS---S
T ss_pred HHHHHHHHHh-------ccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH-C-CceecCCCc---c
Confidence 2222111 11234566666666666664 23356788899999999999999987 3 776664432 2
Q ss_pred ceEEEEEcccChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 292 HNLNISFNFIEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
.++.+.++..+..++...| +||.+++|..|.+. ..+++||++. ++++++++++++|++
T Consensus 363 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~-----------------~~~~iRis~~--~~~e~l~~~l~rl~~ 423 (432)
T 3ei9_A 363 PYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPG-----------------GEGFVRVSAF--GHRENILEACRRFKQ 423 (432)
T ss_dssp SEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCGG-----------------GTTEEEEECC--SCHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCHHHHHHHHHHHCCEEEeCchHhCCC-----------------CCCEEEEEec--CCHHHHHHHHHHHHH
Confidence 3445555555566666665 49999999877542 1389999974 599999999999995
No 271
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.87 E-value=2.3e-21 Score=253.11 Aligned_cols=332 Identities=14% Similarity=0.068 Sum_probs=232.9
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCC
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~g 86 (2602)
...|+.+++++.+.+...+..+ .+...++|+.+++++|.+ ++++++|+|+|+++++.++. +++|
T Consensus 16 p~~~~~~~~a~~~~~~~~~~~~-----------~~~~~~l~~~la~~~~~~--~~~~~~~gt~al~~~~~~~~---~~~g 79 (393)
T 1mdo_A 16 PAMGAEELAAVKTVLDSGWITT-----------GPKNQELEAAFCRLTGNQ--YAVAVSSATAGMHIALMALG---IGEG 79 (393)
T ss_dssp CCCCHHHHHHHHHHHHHTCCSS-----------SHHHHHHHHHHHHHHCCS--EEEEESCHHHHHHHHHHHTT---CCTT
T ss_pred CCCCHHHHHHHHHHHhcCCcCC-----------ChHHHHHHHHHHHHhCCC--cEEEecChHHHHHHHHHHcC---CCCC
Confidence 3456888999998887532111 135788999999999975 89999999999999999982 2799
Q ss_pred CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC-CccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhc
Q psy15216 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK 165 (2602)
Q Consensus 87 d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~ 165 (2602)
|+|+++.++|+++...+.. .|++++.++++++ +.+|+++|++++++++++|++++ |||.+.|+++|.++|+++
T Consensus 80 d~Vl~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~ 153 (393)
T 1mdo_A 80 DEVITPSMTWVSTLNMIVL---LGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVH---YAGAPADLDAIYALGERY 153 (393)
T ss_dssp CEEEEESSSCHHHHHHHHH---TTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBC---GGGCCCCHHHHHHHHHHH
T ss_pred CEEEeCCCccHhHHHHHHH---CCCEEEEEeccCCcCCCCHHHHHHhcCCCceEEEEeC---CCCCcCCHHHHHHHHHHc
Confidence 9999999999998776654 4999999998864 67999999999998999998764 799999999999999999
Q ss_pred CCEEEEecccccccccccCCCCC-ccEEEeccc--cccCCCCcEEEEEe-cCCCCcccceecCCCc-----------ccc
Q psy15216 166 GVIFHCDAAQAVGKIDINIQNYK-VDLMSFSAH--KIYGPKGIGALYIR-RNPRTRIEAQIHGGGH-----------EYG 230 (2602)
Q Consensus 166 g~~livD~a~a~g~~~~dl~~~~-~D~~~~S~~--K~~Gp~G~G~l~~~-~~~~~~l~~~~~g~~~-----------~~~ 230 (2602)
|+++|+|++|+.|... +...++ .|++++|+| |++++..+|+++.+ +++++.+.+....+.. +..
T Consensus 154 ~~~li~D~a~~~g~~~-~~~~~~~~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 232 (393)
T 1mdo_A 154 GIPVIEDAAHATGTSY-KGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQ 232 (393)
T ss_dssp TCCBCEECTTCTTCEE-TTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------C
T ss_pred CCeEEEECccccCCeE-CCeecCCCCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhccccccc
Confidence 9999999999987543 222234 799999999 76654346888886 5666655543322211 111
Q ss_pred cc---ccC-cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCC---CCCCceEEEEEc----
Q psy15216 231 LR---SGT-LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---NRIPHNLNISFN---- 299 (2602)
Q Consensus 231 ~~---~gt-~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~---~~~~~~~~~~~~---- 299 (2602)
+. .|+ .....+.+. .++.. ...+++..++.+++++++.+.|.+ .+ ++++..+. .....++.+.++
T Consensus 233 ~~~~~~g~~~~~~~~~~a-~~~~~-l~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~ 308 (393)
T 1mdo_A 233 AEVLAPGYKYNLPDLNAA-IALAQ-LQKLDALNARRAAIAAQYHQAMAD-LP-FQPLSLPSWEHIHAWHLFIIRVDEARC 308 (393)
T ss_dssp CEESSCCCBCCCCHHHHH-HHHHH-HHTHHHHHHHHHHHHHHHHHHHHT-SS-CEECCCCSSCEECCCSCEEEECCHHHH
T ss_pred ccccccCccCCCCHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHhc-CC-cccccCCCCCCCceeEEEEEEeccccc
Confidence 11 122 111222211 22222 234667788888899999999987 54 77654321 112334556665
Q ss_pred ccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHc---CCC--ccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 300 FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRAL---GCN--DELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 300 ~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~---g~~--~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
..+..++.+.| +||.++++..|... .+.+.. .+ .+. +....+++|++++.++|++|+++++++|++
T Consensus 309 ~~~~~~l~~~l~~~gi~v~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 381 (393)
T 1mdo_A 309 GITRDALMASLKTKGIGTGLHFRAAHT--QKYYRE-RFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQ 381 (393)
T ss_dssp SSCHHHHHHHHHHTTBCCBCCCCCGGG--SHHHHH-HSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHhCCCCcccccCcccc--Chhhhc-cCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 35667777777 79999988766321 122211 00 010 001236899999999999999999999985
No 272
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.87 E-value=1.4e-21 Score=254.51 Aligned_cols=330 Identities=13% Similarity=0.088 Sum_probs=223.3
Q ss_pred CHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEE
Q psy15216 1406 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHI 1485 (2602)
Q Consensus 1406 ~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~V 1485 (2602)
++.+.+++.+.++... .+ +. ......++|+.+++++|.+ +.|+++ ++|+|+++++.++. +++||+|
T Consensus 16 ~~~~~~a~~~~l~~~~--~~---~~----~~~~~~~l~~~la~~~~~~-~~i~~~-sGt~al~~~l~~l~---~~~gd~V 81 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQ--WW---RM----GGDEVNSFEREFAAHHGAA-HALAVT-NGTHALELALQVMG---VGPGTEV 81 (388)
T ss_dssp CHHHHHHHHHHHHTSC--CB---TT----TCSHHHHHHHHHHHHTTCS-EEEEES-CHHHHHHHHHHHTT---CCTTCEE
T ss_pred CHHHHHHHHHHHHcCC--ee---ec----CCHHHHHHHHHHHHHhCCC-eEEEeC-CHHHHHHHHHHHcC---CCCcCEE
Confidence 4789999999887521 00 11 1134678999999999975 445555 55999999999982 2799999
Q ss_pred EEcCCCCcchHHHHHHHHhCCcEEEEeccCCC-CCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCE
Q psy15216 1486 ITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVI 1564 (2602)
Q Consensus 1486 lv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~ 1564 (2602)
+++.++|+++...+... |++++.++++++ +.+|+++|+++++++|++|+ |+||||.+.|+++|.++|++||++
T Consensus 82 i~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~ 155 (388)
T 1b9h_A 82 IVPAFTFISSSQAAQRL---GAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISADTGVP 155 (388)
T ss_dssp EEESSSCTHHHHHHHHT---TCEEEEECBCTTTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCC
T ss_pred EECCCccHHHHHHHHHc---CCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHHcCCE
Confidence 99999999998766544 999999999864 78999999999999998877 889999999999999999999999
Q ss_pred EEEecccccCccc--ccCCCCC-ccEEEEcccccc-CCCceEEEEEecCCC---CccccccccCCc---ccc---CCCCC
Q psy15216 1565 FHCDAAQAVGKID--INIQNYK-VDLMSFSAHKIY-GPKGIGALYIRRNPR---TRIEAQIHGGGH---EYG---LRSGT 1631 (2602)
Q Consensus 1565 vivD~a~~~g~~~--~~l~~~~-~D~~v~S~~K~~-gp~G~G~l~~~~~~~---~~l~~~~~g~~~---~~~---~~~gt 1631 (2602)
+|+|++|+.|... .++..++ +++.++|.||.+ |+. +|+++.+++.+ +.+.... +++. ... ...|+
T Consensus 156 li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~-~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 233 (388)
T 1b9h_A 156 LLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGE-GGAVVFPDGETEKYETAFLRH-SCGRPRDDRRYFHKIAGS 233 (388)
T ss_dssp BCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSS-CEEEEECTTCHHHHHHHHHHT-BTTCCTTCSSCCCCSCCC
T ss_pred EEEecchhcCCccCCeecccccceEEEEccCCCcccCCC-eEEEEECCHHHHHHHHHHHHH-hCCCCccCccceeecccc
Confidence 9999999987644 3333444 344444455754 444 69999887533 3332221 1111 111 12233
Q ss_pred ---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCC---CCCceEEEEEecC---CcHHH
Q psy15216 1632 ---LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN---RIPHNLNISFNFI---EGESL 1702 (2602)
Q Consensus 1632 ---~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~---~~~~~~~~~~~~~---~~~~~ 1702 (2602)
.+....+++..++ ..+++..++++++++++.+.|.+ ++++.+..+... ..+....+.++.. +..++
T Consensus 234 ~~~~~~~~~a~~~~~~----~~l~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 308 (388)
T 1b9h_A 234 NMRLNEFSASVLRAQL----ARLDEQIAVRDERWTLLSRLLGA-IDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNAL 308 (388)
T ss_dssp BCBCBHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHHHHHT-STTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHH
T ss_pred cCCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcc-CCCccccCCCcCCCccceEEEEEEeCCcCcccHHHH
Confidence 2333333322222 33556777888889999999987 678887653221 1234445555532 34566
Q ss_pred HHhc--CCEEEccccccCCCCCChhHHH------------HHcCCCccccCCeEEEecCCCC-CHHHHHHHHHHHHH
Q psy15216 1703 LMAI--KDIAVSSGSACTSASLEPSYVL------------RALGCNDELAHSSIRFTIGRFT-TEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1703 ~~~L--~gI~v~~g~~~~~~~~~~~~~~------------~~~~~~~~~~~~~iRls~~~~~-t~edid~li~~L~~ 1764 (2602)
...| +||.++++.. +.+..+.+.. ..++.......+.|||+++..+ |.+||++++++|++
T Consensus 309 ~~~L~~~gI~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~ 383 (388)
T 1b9h_A 309 VDRLVEAGLPAFAAFR--AIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIAD 383 (388)
T ss_dssp HHHHHHTTCCEEECCC--CGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCcccccC--ccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHH
Confidence 6666 7999887543 2112222211 0122222223468999999999 99999999999987
No 273
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.87 E-value=4.4e-22 Score=262.45 Aligned_cols=316 Identities=12% Similarity=0.074 Sum_probs=231.3
Q ss_pred CCHHHHHHHHHHHhhc----cCCCCCccchhHHHHHHHHHHHHHHHHHHh----C---CCCCcEEEeCCHHHHHHHHHHh
Q psy15216 1405 IDPRVVDKMIPYLRVQ----FGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y---ADPREIIWTSGATESNNLAIKG 1473 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~----~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g---~~~~~iv~t~gaT~al~~al~~ 1473 (2602)
.++.+.+++.+.++.. ..++.. ....++|+++++++ | +++++|++|+|+++|+..++.+
T Consensus 59 ~~~~v~~a~~~~~~~~~~~~~~y~~~----------~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~ 128 (425)
T 1vp4_A 59 PRKELAEIAKEIIEKEYHYTLQYSTT----------EGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKL 128 (425)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTSCCCT----------TCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcchhhcCCCCC----------CCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHH
Confidence 4567888888887642 222221 11356777777777 8 6678999999999999999999
Q ss_pred hhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC--------CceEE-EEeccccc
Q psy15216 1474 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS--------DTILV-SVMLVNNE 1544 (2602)
Q Consensus 1474 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~--------~t~lv-~l~~~~n~ 1544 (2602)
+. ++||+|+++.|+|+++...+.. .|++++.++.++++ +|+++|++++++ ++++| ++++++||
T Consensus 129 l~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~np 200 (425)
T 1vp4_A 129 FL----DDESYCVLDDPAYLGAINAFRQ---YLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNP 200 (425)
T ss_dssp HC----CTTCEEEEEESCCHHHHHHHHT---TTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTT
T ss_pred hC----CCCCEEEEeCCCcHHHHHHHHH---cCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCC
Confidence 86 7999999999999998766544 49999999887654 899999999976 78887 58999999
Q ss_pred cccccC---hHHHHHHhhhcCCEEEEecccccCcc----cccC---CCCCccEEEEccccccCCCc--eEEEEEecCCCC
Q psy15216 1545 IGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI----DINI---QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRT 1612 (2602)
Q Consensus 1545 tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~----~~~l---~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~ 1612 (2602)
||.++| +++|.++|++||+++|+|++|+.... +.++ ...+.++++.|+||.+| +| +||+++++++++
T Consensus 201 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~ 279 (425)
T 1vp4_A 201 AGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKEFIR 279 (425)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCHHHHH
Confidence 999998 56889999999999999999976321 1222 22345788999999888 77 799999877666
Q ss_pred ccccccccCCccccCCCCCcchhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCC---cEEEeCCCCCCCC
Q psy15216 1613 RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRILFLQKRLYNGLMESIE---EIYINGDMNNRIP 1687 (2602)
Q Consensus 1613 ~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~--~~~~~~~~~~~~~l~~~l~~~L~~~~~---gl~i~~~~~~~~~ 1687 (2602)
.+...... ...+.+...+.++.++|+.. ...+++.++++.++++++.+.|.+..+ ++.+..+.. .
T Consensus 280 ~l~~~~~~-------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~---g 349 (425)
T 1vp4_A 280 KIVQAKQS-------ADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEG---G 349 (425)
T ss_dssp HHHHHHHH-------HHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSB---S
T ss_pred HHHHHhhh-------hcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCc---c
Confidence 55432211 11234666666676777642 455678888888999999999987444 577653322 2
Q ss_pred ceEEEEEec-CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1688 HNLNISFNF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1688 ~~~~~~~~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
....+.++. .+..++...| +||.+++|..|... ....+++||+++.. +++++++++++|++
T Consensus 350 ~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~---------------~~~~~~iRis~~~~-~~e~i~~~l~~l~~ 413 (425)
T 1vp4_A 350 LFIWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKVY---------------DEPSPSMRLSFCLP-PDEKIVEGIKRLRE 413 (425)
T ss_dssp SEEEEECCTTCCTTTTHHHHHHHTEECEEGGGGCTT---------------CCCCSEEEEECSSS-CHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCHHHHHHHHHHCCCEEECchhhcCC---------------CCCCCeEEEEeCCC-CHHHHHHHHHHHHH
Confidence 233444442 3445555555 69999999877532 01137899999875 89999999999997
Q ss_pred h
Q psy15216 1765 K 1765 (2602)
Q Consensus 1765 ~ 1765 (2602)
.
T Consensus 414 ~ 414 (425)
T 1vp4_A 414 V 414 (425)
T ss_dssp H
T ss_pred H
Confidence 4
No 274
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.87 E-value=1.1e-21 Score=257.09 Aligned_cols=355 Identities=13% Similarity=0.167 Sum_probs=227.5
Q ss_pred CcccHHHHHHHHHhcCCCccccceeeeeceeeeccCCCCCCCHHHHHHHHHHHhhcc--CCCCCccchhHHHHHHHHHHH
Q psy15216 1365 SPSKFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKA 1442 (2602)
Q Consensus 1365 ~~~~~~~v~~aL~~~g~~~~~~ei~~iP~~~v~L~~~~~~~~~~v~eal~~~l~~~~--~np~~~~~~~~~~~~~~~~~l 1442 (2602)
+|+-|..+.+..+.+ ...+.++|.+ ...++.+++++...+.+.+ +||++..+........+...+
T Consensus 39 d~~~~~~~~~e~~rq-----~~~i~lias~--------n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a 105 (490)
T 2a7v_A 39 DPEMWELLQREKDRQ-----CRGLELIASE--------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLC 105 (490)
T ss_dssp CHHHHHHHHHHHHHH-----HHSEECCTTC--------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHH
T ss_pred CHHHHHHHHHHHHHH-----HcCceEECCC--------CCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHH
Confidence 555555555544332 1345555533 3568899999999887765 678763333222223455577
Q ss_pred HHHHHHHhCCCCCc---EEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHH-----HHHhCCcE--EEEe
Q psy15216 1443 RNEVAQLIYADPRE---IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR-----KLENDGFR--VTYL 1512 (2602)
Q Consensus 1443 r~~ia~~~g~~~~~---iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~-----~~~~~G~~--v~~v 1512 (2602)
++++++++|++++. .++++|+|+|++.++.++. +|||+|+++++.|.++..... .+...|.. +..+
T Consensus 106 ~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~----~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~ 181 (490)
T 2a7v_A 106 QRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALL----QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY 181 (490)
T ss_dssp HHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHC----CSCEECCC-------------------------------C
T ss_pred HHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHc----CCCCEecccCccccccccchhhhcchhHHHcCCeEEEEec
Confidence 89999999998753 3566689999999999987 899999999999977543211 11122443 3444
Q ss_pred ccC-CCCCcChhHHHhhcc-CCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcc-----cccCCCCCc
Q psy15216 1513 KPK-NNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI-----DINIQNYKV 1585 (2602)
Q Consensus 1513 ~~~-~~~~id~d~l~~~i~-~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~-----~~~l~~~~~ 1585 (2602)
+++ .++.+|+++|++++. .++++|+++.++|| ...|+++|.++|++||+++++|++|+.|.+ +.++. ++
T Consensus 182 ~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~a 257 (490)
T 2a7v_A 182 KLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HA 257 (490)
T ss_dssp CBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TC
T ss_pred ccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CC
Confidence 455 368899999999996 47899988877765 567999999999999999999999976543 22232 58
Q ss_pred cEEEEcccc-ccCCCceEEEEEecCCC---------------CccccccccCCccccCCCCCcchhHHHHHHHHHHHHH-
Q psy15216 1586 DLMSFSAHK-IYGPKGIGALYIRRNPR---------------TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLAR- 1648 (2602)
Q Consensus 1586 D~~v~S~~K-~~gp~G~G~l~~~~~~~---------------~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~- 1648 (2602)
|++++|+|| +.||.| |++++++++. +.++...+.+ ..|+++.+.++++.+|+....
T Consensus 258 Div~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g------~qggp~~~~iaAla~Al~~~~~ 330 (490)
T 2a7v_A 258 DIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPS------LQGGPHNHAIAAVAVALKQACT 330 (490)
T ss_dssp SEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTT------TCCSCCHHHHHHHHHHHHHHHS
T ss_pred CEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHHHHHHhccc------CCCCchHHHHHHHHHHHHHHhh
Confidence 999999999 668987 9999987521 1222222111 236688888999988887543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--CCcHHHHHhc--CCEEEccccccCCCCCCh
Q psy15216 1649 IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESLLMAI--KDIAVSSGSACTSASLEP 1724 (2602)
Q Consensus 1649 ~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~L--~gI~v~~g~~~~~~~~~~ 1724 (2602)
..+++..++..++++++.+.|.+ .|+.+..... ..++..+.+.. .+..++...| .||.+..+..+...
T Consensus 331 ~~~~~~~~~~~~na~~L~~~L~~--~G~~v~~~~t--~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~---- 402 (490)
T 2a7v_A 331 PMFREYSLQVLKNARAMADALLE--RGYSLVSGGT--DNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDR---- 402 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSC--SSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCC----
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH--cCcEEecCCC--CCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCC----
Confidence 45688889999999999999988 4888864221 12444444432 3455555555 79998866443321
Q ss_pred hHHHHHcCCCccccCCeEEEecCC----CCCHHHHHHHHHHHHHh
Q psy15216 1725 SYVLRALGCNDELAHSSIRFTIGR----FTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1725 ~~~~~~~~~~~~~~~~~iRls~~~----~~t~edid~li~~L~~~ 1765 (2602)
.....+.||++... ..+++|+++++++|.+.
T Consensus 403 ----------~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~ 437 (490)
T 2a7v_A 403 ----------SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEG 437 (490)
T ss_dssp ----------CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCceEecccccccCCCCHHHHHHHHHHHHHH
Confidence 01123779997533 45889999999999874
No 275
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.87 E-value=3.1e-21 Score=252.07 Aligned_cols=328 Identities=15% Similarity=0.107 Sum_probs=229.7
Q ss_pred CHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEE
Q psy15216 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHI 89 (2602)
Q Consensus 10 p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~V 89 (2602)
++.+.+++.+.+... .+..+ ....++++.+++++|.+ ++++++|+|+|+..++.++. +++||+|
T Consensus 43 ~~~v~~a~~~~~~~~-------~y~~~----~~~~~l~~~la~~~~~~--~~v~~~~Gt~a~~~~l~~~~---~~~gd~v 106 (399)
T 2oga_A 43 RAETDAAIARVLDSG-------RYLLG----PELEGFEAEFAAYCETD--HAVGVNSGMDALQLALRGLG---IGPGDEV 106 (399)
T ss_dssp HHHHHHHHHHHHHHT-------CCSSS----HHHHHHHHHHHHHTTSS--EEEEESCHHHHHHHHHHHTT---CCTTCEE
T ss_pred CHHHHHHHHHHHhcC-------CCCCc----hhHHHHHHHHHHHHCCC--eEEEecCHHHHHHHHHHHhC---CCCcCEE
Confidence 478888888887641 11111 35688999999999976 68888999999999999983 2799999
Q ss_pred EEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCE
Q psy15216 90 ITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVI 168 (2602)
Q Consensus 90 lv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~ 168 (2602)
+++.++|+++...+.. .|++++.++.++ ++.+|+++|++++++++++|+ ++||||.+.|+++|.++|+++|++
T Consensus 107 l~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~ 180 (399)
T 2oga_A 107 IVPSHTYIASWLAVSA---TGATPVPVEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELADRHGLH 180 (399)
T ss_dssp EEESSSCTHHHHHHHH---TTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCE
T ss_pred EECCCccHHHHHHHHH---CCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHHHHcCCE
Confidence 9999999997766654 499999999876 578999999999998999887 467899999999999999999999
Q ss_pred EEEecccccccccccCCCCC--ccEEEecc--ccccCCCC-cEEEEEe-cCCCCcccceecCCCcccccc------ccCc
Q psy15216 169 FHCDAAQAVGKIDINIQNYK--VDLMSFSA--HKIYGPKG-IGALYIR-RNPRTRIEAQIHGGGHEYGLR------SGTL 236 (2602)
Q Consensus 169 livD~a~a~g~~~~dl~~~~--~D~~~~S~--~K~~Gp~G-~G~l~~~-~~~~~~l~~~~~g~~~~~~~~------~gt~ 236 (2602)
+|+|++|+.+... +...++ .|++++|+ +|++|++| +|+++.+ +++++.+.+....+... .+. .+++
T Consensus 181 li~Dea~~~g~~~-~~~~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~~-~~~~~~~g~~~~~ 258 (399)
T 2oga_A 181 IVEDAAQAHGARY-RGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQ-KYSHETKGTNSRL 258 (399)
T ss_dssp ECEECTTCTTCEE-TTEETTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCSS-TTCCCSCCCBCCC
T ss_pred EEEECcccccCcc-CCeecccccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCccc-cccccccccCCCc
Confidence 9999999887542 332233 68999999 59888865 6788876 56666665543322111 111 1234
Q ss_pred chhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeE
Q psy15216 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIA 314 (2602)
Q Consensus 237 ~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~ 314 (2602)
+..+.+++.++++. ++...++..++++++.+.|.+ ++++++...++...+....+.+...+..++...| +||.
T Consensus 259 ~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~ 333 (399)
T 2oga_A 259 DEMQAAVLRIRLAH----LDSWNGRRSALAAEYLSGLAG-LPGIGLPVTAPDTDPVWHLFTVRTERRDELRSHLDARGID 333 (399)
T ss_dssp CHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHTTT-CTTCBCCCCCTTEECCCSSEEEECSSHHHHHHHHHHTTBC
T ss_pred CHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhcc-CCCccccCCCCCCcceeEEEEEECCCHHHHHHHHHHCCCc
Confidence 45555555455542 345667778888899999977 6777665333221111112333334666777777 7999
Q ss_pred EcccccCCCCCCChHHHHHHcCCCccC-------CCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 315 VSSGSACTSASLEPSYVLRALGCNDEL-------AHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 315 v~~g~~~~~~~~~~~~~~~~~g~~~~~-------~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++++.. .+.+.. ..+..++..... ..++|||+++.++|++|+++++++|++.
T Consensus 334 v~~~~~-~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 392 (399)
T 2oga_A 334 TLTHYP-VPVHLS--PAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREW 392 (399)
T ss_dssp CBCSCS-SCGGGS--HHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred eecCCC-Cccccc--hhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 886432 111111 122333332110 1268999999999999999999999864
No 276
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.87 E-value=7.9e-22 Score=259.52 Aligned_cols=343 Identities=12% Similarity=0.073 Sum_probs=234.6
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
+.|+.+.+++.+.+.... .....+..+ .....+++++.+++++|++ ++++++|+|+|+++++.++. +++||
T Consensus 13 ~~~~~~~~a~~~~~~~~~--~~~~~~~~g--~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~---~~~gd 83 (418)
T 2c81_A 13 QHSDRTRRKIEEVFQSNR--WAISGYWTG--EESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALG---IGEGD 83 (418)
T ss_dssp CCCHHHHHHHHHHHHHTC--CSTTSBCCS--SCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTT---CCTTC
T ss_pred CCCHHHHHHHHHHHhcCC--ccccCcccC--CHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcC---CCCcC
Confidence 558999999999987631 110011111 1335788999999999986 67888889999999999983 27999
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcC
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g 166 (2602)
+|+++.++|+++...+... |++++.+++++ ++.+|+++|++++++++++|+++ ||||...|+++|.++|++||
T Consensus 84 ~Vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~~~~~~~ 157 (418)
T 2c81_A 84 EVIVPSLTWIATATAVLNV---NALPVFVDVEADTYCIDPQLIKSAITDKTKAIIPV---HLFGSMANMDEINEIAQEHN 157 (418)
T ss_dssp EEEEESSSCTHHHHHHHHT---TCEEEEECBCTTTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCCHHHHHHHHHHTT
T ss_pred EEEECCCccHhHHHHHHHc---CCEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEEe---CCcCCcccHHHHHHHHHHCC
Confidence 9999999999998777654 99999999886 68899999999999999998875 47999999999999999999
Q ss_pred CEEEEecccccccc-c-ccCCCCCccEEEecc--ccccCCCCcEEEEEe-cCCCCcccceecCCCccc--------ccc-
Q psy15216 167 VIFHCDAAQAVGKI-D-INIQNYKVDLMSFSA--HKIYGPKGIGALYIR-RNPRTRIEAQIHGGGHEY--------GLR- 232 (2602)
Q Consensus 167 ~~livD~a~a~g~~-~-~dl~~~~~D~~~~S~--~K~~Gp~G~G~l~~~-~~~~~~l~~~~~g~~~~~--------~~~- 232 (2602)
+++|+|++|+.+.. . ..+..+ .|+.++|+ ||++|+..+|+++.+ +++++.+.+...++.... .+.
T Consensus 158 ~~li~D~a~~~~~~~~~~~~~~~-~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (418)
T 2c81_A 158 LFVIEDCAQSHGSVWNNQRAGTI-GDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQ 236 (418)
T ss_dssp CEEEEECTTCTTCEETTEETTSS-SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBS
T ss_pred CEEEEECcccccCccCCEecccc-cceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCccccccccccccchhh
Confidence 99999999998763 1 112222 25666666 998877337888885 566666654433222111 111
Q ss_pred -ccCcchhH----HHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCC---CCCceEEEEEc----
Q psy15216 233 -SGTLATHQ----IVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN---RIPHNLNISFN---- 299 (2602)
Q Consensus 233 -~gt~~~~~----~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~---~~~~~~~~~~~---- 299 (2602)
.+++...+ +..+.+++. ....++++..++.+++++++.+.|.+ ++++++..++.. ..+..+.+.++
T Consensus 237 ~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (418)
T 2c81_A 237 LVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNAIREKNAMFLNDALSK-IDGIKVMKRPPQVSRQTYYGYVFRFDPVKF 315 (418)
T ss_dssp EEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTT-STTEEECCCCTTEEECCCSEEEEEECGGGT
T ss_pred ccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCcccCCCCCCCcccccEEEEEEEccccc
Confidence 11122211 111222332 12245678888888999999999977 789988754332 12234446665
Q ss_pred -ccChhHHHHHh--C-CeE---EcccccCCCCCCChHHHHH-------------------HcCCCccCCCCeEEEecCCC
Q psy15216 300 -FIEGESLLMAI--K-DIA---VSSGSACTSASLEPSYVLR-------------------ALGCNDELAHSSIRFTIGRF 353 (2602)
Q Consensus 300 -~~~~~~~~~~L--~-gI~---v~~g~~~~~~~~~~~~~~~-------------------~~g~~~~~~~~~iRis~~~~ 353 (2602)
..+..++...| + ||. ++++..+. +.++.+... .++..+....+.||++++.+
T Consensus 316 ~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~ 393 (418)
T 2c81_A 316 GGLNADQFCEILREKLNMGTFYLHPPYLPV--HKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAIL 393 (418)
T ss_dssp TTCCHHHHHHHHHHHHTCCTTTEECCCCCG--GGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGG
T ss_pred cccCHHHHHHHHHHcCCCCccccccccccc--ccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCcc
Confidence 34677787777 5 999 88776332 111111000 00001111236899999999
Q ss_pred C-CHHHHHHHHHHHHhh
Q psy15216 354 T-TEKEIDFTIKLLKMK 369 (2602)
Q Consensus 354 ~-t~edid~li~~L~~~ 369 (2602)
+ |++|+++++++|++.
T Consensus 394 ~gt~edi~~~~~~l~~~ 410 (418)
T 2c81_A 394 LAEPSHLSLLVDAVAEL 410 (418)
T ss_dssp GSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 9 999999999999964
No 277
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.87 E-value=3.5e-22 Score=261.20 Aligned_cols=306 Identities=17% Similarity=0.196 Sum_probs=205.8
Q ss_pred eEEEEEcCcccEEEEEEECCeeEEEeCCCCCccccEEEEEecCC-----------------cEEEcHHHHhhhccCCCCc
Q psy15216 638 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDG-----------------KIYVGKKAKITQNIDPKNT 700 (2602)
Q Consensus 638 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~-----------------~~~vG~~A~~~~~~~p~~~ 700 (2602)
..|+||+||+++.+++..++.|.+ .+||+|+...+. ..+||.+|... |.
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~--------~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~----~~-- 71 (418)
T 1k8k_A 6 PACVVDCGTGYTKLGYAGNTEPQF--------IIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK----PT-- 71 (418)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSE--------EEESCEEECC-----------CCCTTGGGCEEEGGGGTSC----TT--
T ss_pred CeEEEECCCCeEEEeeCCCCCCCC--------cCCceEEEECcccccccccccccccccccCeEEChHHHhc----CC--
Confidence 468999999999999876655542 256666654321 25667666433 10
Q ss_pred hhhhhhhhCCCCCCCCCCCCCeeeecCCCceEEEEeCceeCHHHHHHHHHHHHHHHHHHhhcCc--cceEEEEEcCCCCH
Q psy15216 701 ISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNR--IFGAVITVPAYFND 778 (2602)
Q Consensus 701 ~~~~K~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~--~~~~ViTVPa~f~~ 778 (2602)
..+++ |+ ..+.+.--+....+++++.. +.++.. ...+|||+|++|+.
T Consensus 72 -~~~~~--------------pi-------------~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~ 120 (418)
T 1k8k_A 72 -YATKW--------------PI-------------RHGIVEDWDLMERFMEQVIF---KYLRAEPEDHYFLLTEPPLNTP 120 (418)
T ss_dssp -SEEEC--------------CE-------------ETTEESCHHHHHHHHHHHHH---TTTCCCGGGCCEEEEECTTCCH
T ss_pred -CEEec--------------cc-------------cCCEECCHHHHHHHHHHHHH---hccCCCCCCCcEEEEeCCCCCH
Confidence 11121 11 11222223334445555442 334433 34799999999999
Q ss_pred HHHHHHHHHH-HHcCCceEEEechhHHHHHH-hhhcc-CcccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCcc
Q psy15216 779 IQRQFTKNAA-KLAGLNVLRLLNEPTSAAIA-YKLDK-NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGG 855 (2602)
Q Consensus 779 ~qr~~~~~Aa-~~AGl~~~~li~EPtAAAl~-y~~~~-~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG 855 (2602)
.+|++|.+++ +.+|++.+.+++||+||+++ |.... ...+.+.+|+|+||||||++++. ++. .+....++..+||
T Consensus 121 ~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~--~G~-~~~~~~~~~~lGG 197 (418)
T 1k8k_A 121 ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA--EGY-VIGSCIKHIPIAG 197 (418)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE--TTE-ECGGGCEEESCSH
T ss_pred HHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE--CCE-EcccceEEEeCcH
Confidence 9999999999 88999999999999999987 52111 00122679999999999999985 443 2333335679999
Q ss_pred hHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHccccc-----------------ceEEEEE-ecCCceEEEEeC
Q psy15216 856 DDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQS-----------------SVKLNVK-LSDKKIVNITID 917 (2602)
Q Consensus 856 ~~~D~~l~~~l~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~-----------------~~~~~i~-~~~~~~~~~~it 917 (2602)
++||+.|.+++.+++.. .... .-...+|++|+.++... ...+.++ ...+....++++
T Consensus 198 ~~lt~~l~~~l~~~~~~--~~~~---~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~ 272 (418)
T 1k8k_A 198 RDITYFIQQLLRDREVG--IPPE---QSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVG 272 (418)
T ss_dssp HHHHHHHHHHHHTTCCC--CCGG---GHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCC--CCCH---HHHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCCCCCCcccEEEeC
Confidence 99999999999865321 1100 11256788888775421 1234444 223456678999
Q ss_pred HHHH---HHHHHHHH------HHHHHHHHHHHHHcC--CCccccceEEEecCccchHHHHHHHHhhccC-----------
Q psy15216 918 MKQF---FTITQHLV------NRTILLSSKALMDAN--LTIKDINNVILVGGSTRMKHIHEGVSNFFKT----------- 975 (2602)
Q Consensus 918 r~~f---e~l~~~~~------~~~~~~i~~~l~~a~--~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~~----------- 975 (2602)
+++| |.+++|.+ ..+.++|.+.|..+. +.+..++.|+|+||+|++|.++++|++.++.
T Consensus 273 ~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~ 352 (418)
T 1k8k_A 273 YERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEE 352 (418)
T ss_dssp THHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccc
Confidence 9999 66666543 568888999998865 3455678999999999999999999876632
Q ss_pred -------------cccCcCCcchHhHHHHHHHhH
Q psy15216 976 -------------TLLTSIDPDKAVVFGAAIQAN 996 (2602)
Q Consensus 976 -------------~~~~~~~p~~aVa~GAa~~a~ 996 (2602)
++..+.+|..++.+||+++|.
T Consensus 353 ~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 353 LSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp HC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred cccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 233456788999999999985
No 278
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.87 E-value=2.1e-21 Score=254.73 Aligned_cols=316 Identities=17% Similarity=0.171 Sum_probs=229.0
Q ss_pred CCHHHHHHHHHHHhhcc---CCCCCccchhHHHHHHHHHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1405 IDPRVVDKMIPYLRVQF---GNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~---~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g--~~~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
.++.+.+++.+.++... .++.. ....++|+.+++++ | +++++|++|+|+|+|++.++.++.
T Consensus 50 ~~~~v~~a~~~~~~~~~~~~~y~~~----------~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~ 119 (407)
T 2zc0_A 50 PRAVLGEIAKEVLEKEPKSVMYTPA----------NGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLI 119 (407)
T ss_dssp CHHHHHHHHHHHHHHCGGGGSCCCT----------TCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhhccccccCCCC----------CCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhc
Confidence 45678888888876521 02111 12456778888887 8 567899999999999999999986
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhcc----C--CceEE-EEeccccccccc
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC----S--DTILV-SVMLVNNEIGVI 1548 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~----~--~t~lv-~l~~~~n~tG~~ 1548 (2602)
++||+|+++.|+|+++...+. ..|++++.++.++++ +|+++|+++++ + ++++| ++++++||||.+
T Consensus 120 ----~~gd~vl~~~p~~~~~~~~~~---~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~ 191 (407)
T 2zc0_A 120 ----DPGDVVITENPSYINTLLAFE---QLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVT 191 (407)
T ss_dssp ----CTTCEEEEEESCCHHHHHHHH---TTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC
T ss_pred ----CCCCEEEEeCCChHHHHHHHH---HcCCEEEEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcC
Confidence 799999999999998766554 449999999987655 99999999998 6 78887 578999999999
Q ss_pred cChH---HHHHHhhhcCCEEEEecccccCcc----cccCC---CCCccEEEEccccccCCCc--eEEEEEecCCCCcccc
Q psy15216 1549 QPIL---EIGELCRSKGVIFHCDAAQAVGKI----DINIQ---NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEA 1616 (2602)
Q Consensus 1549 ~~l~---~I~~ia~~~gi~vivD~a~~~g~~----~~~l~---~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~ 1616 (2602)
+|++ +|.++|++||+++|+|++|+.+.. ..++. ..+.++++.|+||.+| +| +|++++++++++.+.+
T Consensus 192 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~~~ 270 (407)
T 2zc0_A 192 MSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLM 270 (407)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecCHHHHHHHHH
Confidence 9976 999999999999999999976432 11222 2234578889999888 56 7999998776665544
Q ss_pred ccccCCccccCCCCCcchhHHHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEE
Q psy15216 1617 QIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--R-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNIS 1693 (2602)
Q Consensus 1617 ~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~--~-~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~ 1693 (2602)
.... .. .+.+...+.++..+++.. . ..+++..+++.++++++.+.|.+..+++.+..+.. .....+.
T Consensus 271 ~~~~------~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~~~~~ 340 (407)
T 2zc0_A 271 QKQP------ID-FCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIA---GMFVMFF 340 (407)
T ss_dssp HHTT------TT-SSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSB---SSEEEEE
T ss_pred HHHh------hc-CCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCC---cEEEEEE
Confidence 3211 11 123455555666666632 3 45677788888999999999976456655443221 2233344
Q ss_pred Ee-cCCcHHHHHhc--C-CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1694 FN-FIEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1694 ~~-~~~~~~~~~~L--~-gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
++ ..+..++...| + ||.+++|..|... ....+++||+++.. |.+++++++++|++.
T Consensus 341 ~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~---------------~~~~~~iRis~~~~-~~~~i~~~~~~l~~~ 400 (407)
T 2zc0_A 341 LPEGADGISFANELMEREGVVVVPGKPFYTD---------------ESGKNAIRLNFSRP-SKEEIPIGIKKLAKL 400 (407)
T ss_dssp CSTTCCHHHHHHHHHHHTCEECBCSGGGCSS---------------SCCTTEEEEECSSS-CTTHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhCCeEEECchhccCC---------------CCCCCeEEEEeCCC-CHHHHHHHHHHHHHH
Confidence 43 23556676666 5 9999999877542 01137899999876 889999999999874
No 279
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.87 E-value=1.8e-21 Score=253.73 Aligned_cols=305 Identities=16% Similarity=0.127 Sum_probs=221.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHH-HHhCCc
Q psy15216 1429 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 1507 (2602)
Q Consensus 1429 ~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~ 1507 (2602)
|.+++.......++|+++++++|.+ +.++++++++|++.++.++. ++||+|+++.+.|+++...+.. +...|+
T Consensus 106 ~~y~r~~~~~~~~l~~~lA~l~g~~--~~v~~~sG~~Ai~~al~~l~----~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~ 179 (445)
T 1qgn_A 106 FEYGRYGNPTTVVLEEKISALEGAE--STLLMASGMCASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETILPKMGI 179 (445)
T ss_dssp CCBGGGCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHS----CSSCEEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred ccccCCCChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHh----CCCCEEEEcCCCchhHHHHHHHHHHHcCC
Confidence 3344444567889999999999975 44455555699999999886 7999999999999998776553 455699
Q ss_pred EEEEeccCCCCCcChhHHHhhccCCc-eEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCcc
Q psy15216 1508 RVTYLKPKNNGLITLSQLEEKICSDT-ILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 1586 (2602)
Q Consensus 1508 ~v~~v~~~~~~~id~d~l~~~i~~~t-~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D 1586 (2602)
++++++.+ |+++|+++|+++| ++|++++|+||||.+.|+++|.++|++||+++++|++|+.+.... ...+++|
T Consensus 180 ~v~~v~~~-----d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~-~~~~g~D 253 (445)
T 1qgn_A 180 TATVIDPA-----DVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQK-ALALGAD 253 (445)
T ss_dssp EEEEECSS-----CHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-TTTTTCS
T ss_pred EEEEeCCC-----CHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-ccccCCE
Confidence 99999864 8999999999999 999999999999999999999999999999999999998776432 3356899
Q ss_pred EEEEccccccCCCc---eEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 1587 LMSFSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 1663 (2602)
Q Consensus 1587 ~~v~S~~K~~gp~G---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~ 1663 (2602)
++++|+||++|+.| +|+++.++++++.+.+... ...++++....+.+..+++. +....+++.+.++
T Consensus 254 iv~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~-------~~g~~~~~~~a~~~~~~l~~----l~~r~~~~~~~a~ 322 (445)
T 1qgn_A 254 LVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHH-------ILGGALNPNAAYLIIRGMKT----LHLRVQQQNSTAL 322 (445)
T ss_dssp EEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHH-------HHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHH
T ss_pred EEEECCcccccccccceEEEEEECHHHHHHHHHHHH-------HhCCCCCHHHHHHHHHhHHH----HHHHHHHHHHHHH
Confidence 99999999888877 8999998876555543221 01123343333333344432 3344455566678
Q ss_pred HHHHHHhhcCCcE-EEeCCC--CC-----------CCCceEEEEEecC--CcHHHHHhcC--CEEEccccccCCC-----
Q psy15216 1664 RLYNGLMESIEEI-YINGDM--NN-----------RIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACTSA----- 1720 (2602)
Q Consensus 1664 ~l~~~L~~~~~gl-~i~~~~--~~-----------~~~~~~~~~~~~~--~~~~~~~~L~--gI~v~~g~~~~~~----- 1720 (2602)
++.+.|.+ .|++ .+..|. .+ ..+.+..|.+++. ....++..|. ++.++.|..|...
T Consensus 323 ~l~~~L~~-~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~ 401 (445)
T 1qgn_A 323 RMAEILEA-HPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAI 401 (445)
T ss_dssp HHHHHHHT-CTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHH
T ss_pred HHHHHHhc-CCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeecccc
Confidence 88888887 6777 454331 10 1355666666542 2455666664 8888888887531
Q ss_pred ---CCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1721 ---SLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1721 ---~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
...++..+..+|+++ +.||||++. ||++++++.|++.
T Consensus 402 ~~h~~~~~~~~~~~g~~~----~~iRlSvG~----Edid~li~~L~~a 441 (445)
T 1qgn_A 402 MSYWDLSQSDRAKYGIMD----NLVRFSFGV----EDFDDLKADILQA 441 (445)
T ss_dssp HHSTTSCHHHHHTTTCCS----SEEEEECCS----SCHHHHHHHHHHH
T ss_pred cccccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHH
Confidence 012344556677654 899999993 6899999988863
No 280
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.87 E-value=1.5e-21 Score=255.53 Aligned_cols=319 Identities=16% Similarity=0.150 Sum_probs=229.3
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCE
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 1484 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~ 1484 (2602)
.++.+.+++.+.+.....+++. +...+.......++|+++++++|. ++++++++|++ ++..++..+.. +.+||+
T Consensus 61 ~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~la~~~~~-~~~i~~~sG~~-a~~~~~~~l~~--~~~gd~ 134 (401)
T 2bwn_A 61 QHPVVLAAMHEALEAVGAGSGG--TRNISGTTAYHRRLEAEIAGLHQK-EAALVFSSAYN-ANDATLSTLRV--LFPGLI 134 (401)
T ss_dssp GCHHHHHHHHHHHHHHCSCCCS--BTTTBCCBHHHHHHHHHHHHHTTC-SEEEEESCHHH-HHHHHHHHHHH--HSTTCE
T ss_pred CCHHHHHHHHHHHHHcCCCCCC--cCcccCChHHHHHHHHHHHHHhCC-CcEEEECCcHH-HHHHHHHHHhc--CCCCCE
Confidence 5678999999998875444442 221222234678899999999997 46777876655 76666665431 258999
Q ss_pred EEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhcc----CCceEEEEeccccccccccChHHHHHHhhh
Q psy15216 1485 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC----SDTILVSVMLVNNEIGVIQPILEIGELCRS 1560 (2602)
Q Consensus 1485 Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~----~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~ 1560 (2602)
|+++.++|+++...+... |++++.++.+ |+++++++++ +++++|++++++||||.++|+++|.++|++
T Consensus 135 Vl~~~~~~~~~~~~~~~~---g~~~~~v~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 206 (401)
T 2bwn_A 135 IYSDSLNHASMIEGIKRN---AGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEE 206 (401)
T ss_dssp EEEETTCCHHHHHHHHHS---CCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHH
T ss_pred EEECchhhHHHHHHHHHc---CCeEEEEcCC-----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHH
Confidence 999999999988776554 8999999864 7888988886 689999999999999999999999999999
Q ss_pred cCCEEEEecccccCccc-c-----cCCCC--CccEEEEccccccCCCceEEEEEecCCCCccccccccCCccccCCCCCc
Q psy15216 1561 KGVIFHCDAAQAVGKID-I-----NIQNY--KVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 1632 (2602)
Q Consensus 1561 ~gi~vivD~a~~~g~~~-~-----~l~~~--~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~ 1632 (2602)
||+++|+|++|+.|... . ..... ..++++.|++|.+|++| ||++.++++.+.+..... ...+..+++
T Consensus 207 ~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G-G~~~~~~~~~~~l~~~~~----~~~~~~~~~ 281 (401)
T 2bwn_A 207 FGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG-GYIAASARMVDAVRSYAP----GFIFSTSLP 281 (401)
T ss_dssp HTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC-EEEEECHHHHHHHHHHCH----HHHTSBCCC
T ss_pred cCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC-CEEecCHHHHHHHHHhCc----CceecCCCC
Confidence 99999999999865321 0 01111 35889999999888877 999988665544432110 112334454
Q ss_pred chhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-CCcHHHHHhc---C
Q psy15216 1633 ATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI---K 1707 (2602)
Q Consensus 1633 ~~~~~~al~~aL~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~L---~ 1707 (2602)
+ ..++++.+++++... ++++.++++.++++++.+.|.+ . ++.+..+. ..+..+.++. .+..++...| +
T Consensus 282 ~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~~~~~~~~~~~~~~~~~~~L~~~~ 354 (401)
T 2bwn_A 282 P-AIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKA-L-GMPIIDHG----SHIVPVVIGDPVHTKAVSDMLLSDY 354 (401)
T ss_dssp H-HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-H-TCCBCCCS----SSCEEEECCCHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-C-CCcccCCC----CCeEEEEeCChHHHHHHHHHHHhcC
Confidence 5 666777788886543 4678889999999999999987 3 66555332 1233444432 2344565554 4
Q ss_pred CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1708 DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1708 gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
||.++++..+..+ ...+++|++++.++|.+|+++++++|++.
T Consensus 355 gi~v~~~~~~~~~----------------~~~~~iRis~~~~~t~~~i~~~~~~l~~~ 396 (401)
T 2bwn_A 355 GVYVQPINFPTVP----------------RGTERLRFTPSPVHDLKQIDGLVHAMDLL 396 (401)
T ss_dssp CEECCEECTTTSC----------------TTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred CEEEeecCCCCCC----------------CCCceEEEEeeCCCCHHHHHHHHHHHHHH
Confidence 9999877643221 01268999999999999999999999873
No 281
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.87 E-value=3.3e-22 Score=263.57 Aligned_cols=277 Identities=16% Similarity=0.117 Sum_probs=213.2
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEecc--
Q psy15216 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP-- 118 (2602)
Q Consensus 41 ~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~-- 118 (2602)
...+++++++|+ +|++ +++++++|+|+|+.+++.++. ++||+|+++.+.|+++...+... |++++++++
T Consensus 57 ~~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~----~~gd~Vlv~~~~h~s~~~~~~~~---G~~~~~v~~~~ 127 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFS----QKKGDILMARNVHKSVLHALDIS---QQEGHFIETHQ 127 (446)
T ss_dssp SHHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTT----TSSSCEEECTTCCHHHHHHHHHH---TCCEEECEEEE
T ss_pred hHHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhc----CCCCEEEEecCccHHHHHHHHHc---CCeEEEEeCee
Confidence 467899999999 9987 689999999999999999987 79999999999999999988877 999999988
Q ss_pred CCC----CccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccc-----cccCCCCCc
Q psy15216 119 KNN----GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI-----DINIQNYKV 189 (2602)
Q Consensus 119 ~~~----~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~-----~~dl~~~~~ 189 (2602)
+++ +.+|+++| +.+++++|++++ .|+||.+.|+++|.++|++||+++|+|++|+. .. +++....++
T Consensus 128 ~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~~~~~~~~g~ 202 (446)
T 2x3l_A 128 SPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGFPDSTLNYQA 202 (446)
T ss_dssp CTTTSSEEEEEC----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTSCCCGGGGTC
T ss_pred ccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCCCCChHHcCC
Confidence 554 56888888 567899999999 56699999999999999999999999999986 22 444555678
Q ss_pred cEEEecccc-ccCCCCcEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHh-HHHHHHHHHHHHH
Q psy15216 190 DLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIE-MKEELKRILFLQK 267 (2602)
Q Consensus 190 D~~~~S~~K-~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~-~~~~~~~~~~l~~ 267 (2602)
|++++|+|| ++|+.|+|++++++++++ +.+...++ ..+..+++++..++++.+++++.... .++..++..++++
T Consensus 203 Di~~~S~~K~l~~~~g~g~l~~~~~~i~-~~~~~~~~---~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~ 278 (446)
T 2x3l_A 203 DYVVQSFHKTLPALTMGSVLYIHKNAPY-RENIIEYL---SYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIE 278 (446)
T ss_dssp SEEEECHHHHSSSCTTCEEEEEETTCTT-HHHHHHHH---HHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CEEEECCccccccccccEEEEEcCCcCC-HHHHHHHH---HHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999 788889999999988765 33322110 22346788888888888888865543 3447777777777
Q ss_pred HHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEc-ccccCCCCCCChHHHHHHcCCCccCCCC
Q psy15216 268 RLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVS-SGSACTSASLEPSYVLRALGCNDELAHS 344 (2602)
Q Consensus 268 ~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (2602)
++++. +++++.+.. +..+.+.+++.+..++.+.| +||.++ +|. +
T Consensus 279 ~l~~~------g~~~~~~~~---~~~l~i~~~~~~~~~l~~~L~~~GI~v~~~g~------------------------~ 325 (446)
T 2x3l_A 279 CLENK------GFEMLQVDD---PLKLLIKYEGFTGHDIQNWFMNAHIYLELADD------------------------Y 325 (446)
T ss_dssp HHHHH------TCEEEECSS---TTEEEEECTTSCHHHHHHHHHHTTEEESEECS------------------------S
T ss_pred HHHHc------CCEECcCCC---CeEEEEEeCCcCHHHHHHHHHHCCCEEEecCC------------------------C
Confidence 77766 566664432 23345555555666777766 799886 221 5
Q ss_pred eEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 345 SIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 345 ~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++|++++.++|++++ +++++|++.
T Consensus 326 ~iRi~~~~~~t~e~i-~l~~aL~~~ 349 (446)
T 2x3l_A 326 QALAILPLWHHDDTY-LFDSLLRKI 349 (446)
T ss_dssp CEEEECCCCCTTCCC-CHHHHHHHH
T ss_pred EEEEEeecCCCHHHH-HHHHHHHHH
Confidence 799999999999999 999999964
No 282
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.87 E-value=1.8e-21 Score=252.64 Aligned_cols=308 Identities=15% Similarity=0.061 Sum_probs=221.7
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHH-HhCC
Q psy15216 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDG 110 (2602)
Q Consensus 32 ~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G 110 (2602)
.|.+++...+..+++++++++++|.+ ++++++|+++|++.++.++. ++||+|+++.++|+++...+... +..|
T Consensus 57 ~~~y~r~~~~~~~~l~~~la~~~g~~--~~~~~~sGt~A~~~al~~~~----~~gd~Vi~~~~~y~~~~~~~~~~~~~~g 130 (392)
T 3qhx_A 57 GYEYARTGNPTRTALEAALAAVEDAA--FGRAFSSGMAAADCALRAML----RPGDHVVIPDDAYGGTFRLIDKVFTGWN 130 (392)
T ss_dssp TBCBTTTCCHHHHHHHHHHHHHTTCS--EEEEESSHHHHHHHHHHHHC----CTTCEEEEETTCCHHHHHHHHHTGGGGT
T ss_pred CccccCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEeCCCcchHHHHHHHHHHhcC
Confidence 35556556677899999999999976 78999999999999999887 79999999999999987776443 5679
Q ss_pred cEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccccccCCCCCcc
Q psy15216 111 FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 190 (2602)
Q Consensus 111 ~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D 190 (2602)
+++++++.+ |+++++++++++|++|++++|+||||.+.|+++|+++|++||+++|+|++|+.+.. .+...+++|
T Consensus 131 ~~~~~v~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~-~~~~~~~~d 204 (392)
T 3qhx_A 131 VEYTPVALA-----DLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL-QQPLSLGAD 204 (392)
T ss_dssp CEEEEECTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT-CCGGGGTCS
T ss_pred cEEEEeCCC-----CHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc-CChHHhCCc
Confidence 999999865 89999999999999999999999999999999999999999999999999987643 233356789
Q ss_pred EEEeccccccCCCC---cEEEEEec-CCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q psy15216 191 LMSFSAHKIYGPKG---IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ 266 (2602)
Q Consensus 191 ~~~~S~~K~~Gp~G---~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~ 266 (2602)
+++.|+||++|++| +|+++.++ ++.+.+..... ....+++....+.+..+++. +....++..+++
T Consensus 205 i~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~-------~~g~~~~~~~~~~~~~~l~~----l~~~~~~~~~~~ 273 (392)
T 3qhx_A 205 VVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQN-------GAGAVPGPFDAYLTMRGLKT----LVLRMQRHSENA 273 (392)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHH-------HHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHH
T ss_pred EEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHH-------hcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHH
Confidence 99999999888776 79999874 44444433221 01123333333333333332 344556667777
Q ss_pred HHHHHHHhhccCceEEe-CCC--CC-----------CCCceEEEEEcc--cChhHHHHHh--CCeEEcccccCCCC----
Q psy15216 267 KRLYNGLMESIEEIYIN-GDM--NN-----------RIPHNLNISFNF--IEGESLLMAI--KDIAVSSGSACTSA---- 324 (2602)
Q Consensus 267 ~~l~~~L~~~~~g~~l~-~~~--~~-----------~~~~~~~~~~~~--~~~~~~~~~L--~gI~v~~g~~~~~~---- 324 (2602)
+++.+.|.+ .|.+... .|. .. ..+.++.|.++. .....++..| .++.++.|..|+..
T Consensus 274 ~~l~~~L~~-~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~ 352 (392)
T 3qhx_A 274 AAVAEFLAE-HPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPS 352 (392)
T ss_dssp HHHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGG
T ss_pred HHHHHHHhc-CCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCcc
Confidence 788888876 5666432 221 11 124456677765 3456677777 57778888775421
Q ss_pred CCChHHHHH-HcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 325 SLEPSYVLR-ALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (2602)
Q Consensus 325 ~~~~~~~~~-~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~ 367 (2602)
...+..... .+|+ .++.||||++..+++++++.+.++|+
T Consensus 353 ~~~~~~~~~~~~g~----~~~~iRlSvg~e~~~~~i~~l~~al~ 392 (392)
T 3qhx_A 353 AMTHASTAGSQLEV----PDDLVRLSVGIEDVADLLDDLKQALG 392 (392)
T ss_dssp GTSCGGGBTTBCCC----CTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred cccccccCHHHcCC----CCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 000000000 1222 35889999999999999999888763
No 283
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.87 E-value=2.2e-21 Score=249.73 Aligned_cols=314 Identities=14% Similarity=0.182 Sum_probs=223.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
|+++..+++++.+++++.+.+.. + . .++...+..+++++++++++| .+.++++++|+|+|+.+++.++.
T Consensus 12 ~~~~~~~~~~~~v~~a~~~~~~~---~--~----~~~~~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~~~- 80 (356)
T 1v72_A 12 FSSDNIAGASPEVAQALVKHSSG---Q--A----GPYGTDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSAMT- 80 (356)
T ss_dssp CSCGGGCCCCHHHHHHHHHTTSS---C--C----CSTTCSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHTSC-
T ss_pred eccCCccCCCHHHHHHHHhhccC---c--c----cccccchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHHhc-
Confidence 34444457889999999886521 1 1 111223467899999999999 44469999999999999999987
Q ss_pred ccccCCCEEEEcCCCCcccHHH--HHHHHhC-CcEEEEeccCCCCccChHHHHh-hccC-------CceEEEEecccCcc
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDS--IRKLEND-GFRVTYLKPKNNGLITLSQLEE-KICS-------DTILVSVMLVNNEI 149 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~--~~~~~~~-G~~v~~v~~~~~~~ld~e~l~~-~i~~-------~tklv~i~~~~npT 149 (2602)
++||+|+++.+.|+++... +... . |++++.++.+ ++.+|+++|++ ++++ ++++|++++++| |
T Consensus 81 ---~~gd~vi~~~~~~~~~~~~~~~~~~--~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-t 153 (356)
T 1v72_A 81 ---PPWGNIYCHPASHINNDECGAPEFF--SNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-V 153 (356)
T ss_dssp ---CTTEEEEECTTSHHHHSSTTHHHHH--TTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-T
T ss_pred ---CCCCEEEEcCccchhhhhchHHHHH--hCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-C
Confidence 7999999999998876544 3222 2 8899999875 47799999999 9975 689999999886 9
Q ss_pred ccccc---HHHHHHHHHhcCCEEEEeccccccc-----ccccCCC--CCccEEEeccccccCCCCcEEEEEecCCCCccc
Q psy15216 150 GVIQP---ILEIGELCRSKGVIFHCDAAQAVGK-----IDINIQN--YKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIE 219 (2602)
Q Consensus 150 G~~~~---l~~I~~la~~~g~~livD~a~a~g~-----~~~dl~~--~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~ 219 (2602)
|.++| +++|.++|++||+++|+|++|+.+. .+..... .+.|++++|+||+.+|.|+|++++++++++.+.
T Consensus 154 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~g~~~G~g~~~~~~~~~~~~~ 233 (356)
T 1v72_A 154 GSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMS 233 (356)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSCEEEEESSGGGHHHHH
T ss_pred CccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccCCCcCccEEEEECHHHHhhHH
Confidence 99555 7889999999999999999986431 1122111 357899999999855777789998887776654
Q ss_pred ceecCCCccccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEE
Q psy15216 220 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF 298 (2602)
Q Consensus 220 ~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~ 298 (2602)
.... ..++.......++..+++... ..+.+..++..++++++.+.|.+ ++++++..+.. ..+..+.+
T Consensus 234 ~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~---~~~~~~~~ 301 (356)
T 1v72_A 234 YRRK--------RAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEG-LGGVEVLGGTE---ANILFCRL 301 (356)
T ss_dssp HHHH--------HTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTT-CTTEEEESCCC---SSEEEEEE
T ss_pred HHhh--------ccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh-CCCcEEccCCC---ccEEEEEc
Confidence 3321 011111112222323344322 23456777888999999999977 68888865432 23333444
Q ss_pred cccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 299 NFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 299 ~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+ .++...| +||.+++|. +. .+++|++++.+++++|+++++++|++.
T Consensus 302 ~----~~~~~~l~~~gi~v~~g~-~~--------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~ 349 (356)
T 1v72_A 302 D----SAMIDALLKAGFGFYHDR-WG--------------------PNVVRFVTSFATTAEDVDHLLNQVRLA 349 (356)
T ss_dssp C----HHHHHHHHHTTCBCBCSS-SS--------------------TTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred C----HHHHHHHHhcCeEEeccc-cC--------------------CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 3 3566666 788888664 21 278999999999999999999999864
No 284
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.87 E-value=2.6e-21 Score=252.36 Aligned_cols=308 Identities=12% Similarity=0.096 Sum_probs=211.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHH-HhCCc
Q psy15216 1429 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGF 1507 (2602)
Q Consensus 1429 ~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~ 1507 (2602)
|.+++.......++++.+++++|.+ +.++++|+++|++.++.++. ++||+|+++.+.|+++...+..+ ...|+
T Consensus 57 ~~~~r~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~----~~gd~vl~~~~~~~~~~~~~~~~~~~~g~ 130 (398)
T 1gc0_A 57 HFYSRISNPTLNLLEARMASLEGGE--AGLALASGMGAITSTLWTLL----RPGDEVLLGNTLYGCTFAFLHHGIGEFGV 130 (398)
T ss_dssp ------CCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC----CTTCEEEEESSCCSHHHHHHHHTGGGGTC
T ss_pred CcccCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----cCCCEEEEeCCCchhHHHHHHHHHHHcCC
Confidence 4444444567889999999999975 56667777899999999986 79999999999999988777543 45699
Q ss_pred EEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccE
Q psy15216 1508 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 1587 (2602)
Q Consensus 1508 ~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~ 1587 (2602)
++++++.+ |+++++++++++|++|++++|+||||.+.|+++|.++|++||+++|+|++|+.+....++ .+++|+
T Consensus 131 ~~~~~~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~-~~~~d~ 204 (398)
T 1gc0_A 131 KLRHVDMA-----DLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPL-ELGADL 204 (398)
T ss_dssp EEEEECTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGG-GGTCSE
T ss_pred EEEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCceE
Confidence 99998753 899999999999999999999999999999999999999999999999999877644333 357899
Q ss_pred EEEccccccC-CCc--eEEEEEecCCCC-ccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 1588 MSFSAHKIYG-PKG--IGALYIRRNPRT-RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 1663 (2602)
Q Consensus 1588 ~v~S~~K~~g-p~G--~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~ 1663 (2602)
++.|+||++| |.+ .|+++++++.+. .+.+...+ +..++.+....+++..+++.. ....++..+.++
T Consensus 205 ~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~ 274 (398)
T 1gc0_A 205 VVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKD------MTGAVLSPHDAALLMRGIKTL----NLRMDRHCANAQ 274 (398)
T ss_dssp EEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHH------HTCCCCCHHHHHHHHHHHTTH----HHHHHHHHHHHH
T ss_pred EEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhc------cCCCCCCHHHHHHHHhccchH----HHHHHHHHHHHH
Confidence 9999999666 443 599999876443 33332211 023455655555554555533 334445555666
Q ss_pred HHHHHHhhcCCcEE--------------EeCCCCCCCCceEEEEEecC--CcHHHHHhcCCEEEcc---ccc------cC
Q psy15216 1664 RLYNGLMESIEEIY--------------INGDMNNRIPHNLNISFNFI--EGESLLMAIKDIAVSS---GSA------CT 1718 (2602)
Q Consensus 1664 ~l~~~L~~~~~gl~--------------i~~~~~~~~~~~~~~~~~~~--~~~~~~~~L~gI~v~~---g~~------~~ 1718 (2602)
.+.+.|.+ .+.+. +..+.....+.+..|.+++. ....++.. .++.++. |+. |.
T Consensus 275 ~l~~~L~~-~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~-~~i~~~~~s~G~~~sl~~~~~ 352 (398)
T 1gc0_A 275 VLAEFLAR-QPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGRRFMNA-LQLFSRAVSLGDAESLAQHPA 352 (398)
T ss_dssp HHHHHHHT-CTTEEEEEEC----------------CCTTEEEEEETTHHHHHHHHHHH-CSSSEECSCCSCSSCEEECGG
T ss_pred HHHHHHhc-CCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCHHHHHHHHHh-CCCceeccCCCCcceeeeccc
Confidence 66666655 34332 22211112345555555431 12233333 3444333 422 21
Q ss_pred C--CCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1719 S--ASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1719 ~--~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
. ....++.....+|.+ .++||||++.++++++++.+.++|++
T Consensus 353 ~~~~~~~~~~~~~~~g~~----~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 353 SMTHSSYTPEERAHYGIS----EGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp GTTTSSSCHHHHHHTTCC----TTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHhcCCC----CCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 1 112345566677765 38999999999999999999999986
No 285
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.87 E-value=7.4e-22 Score=260.04 Aligned_cols=299 Identities=15% Similarity=0.091 Sum_probs=205.4
Q ss_pred HHHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHHHHhcccccccCCC-----EEEEc-CCCCcccHHHHHHHH--
Q psy15216 42 AIEKARNEVAQLI------YADPREIIWTSGATESNNLAIKGAAHFYKKRGK-----HIITV-QTEHKSVLDSIRKLE-- 107 (2602)
Q Consensus 42 ~~~~~r~~lA~~~------g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd-----~Vlv~-~~~~~s~~~~~~~~~-- 107 (2602)
...++|+++|+++ ++++++|++|+|+|+|+++++.++. ++|| +|+++ .|+|+.+...+....
T Consensus 76 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~----~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~ 151 (417)
T 3g7q_A 76 GKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFA----GRRADGSTKKVLFPLAPEYIGYADSGLEDDLF 151 (417)
T ss_dssp SHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS----BC----CCBEEEESSCCCHHHHHC-----CCE
T ss_pred CcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHc----CCCccCCcceEEEeCCCccccchhhccchhhh
Confidence 3566777777776 5678899999999999999999997 7877 99998 999998876654331
Q ss_pred -hCCcEEEEeccCC-CCccChHHHHhhccCCceEEEEecccCccccccc---HHHHHHHHHhcCCEEEEecccccccccc
Q psy15216 108 -NDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKIDI 182 (2602)
Q Consensus 108 -~~G~~v~~v~~~~-~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~---l~~I~~la~~~g~~livD~a~a~g~~~~ 182 (2602)
..+..+..++.+. ++.+|+++++ ++++++++++++|+||||.++| +++|+++|++||+++|+|++|+.+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~ 229 (417)
T 3g7q_A 152 VSARPNIELLPEGQFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI 229 (417)
T ss_dssp EECCCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC
T ss_pred ccccCcccccCCcccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc
Confidence 2244555555432 3568999998 7889999999999999999999 8888999999999999999997532111
Q ss_pred -----cCCCCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHH--HH
Q psy15216 183 -----NIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RI 253 (2602)
Q Consensus 183 -----dl~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~--~~ 253 (2602)
.....+.++++.|+|| ++++| +||++.++++++.+..... ....+++.....++.++++.. ..
T Consensus 230 ~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~ 301 (417)
T 3g7q_A 230 IFSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIANDKTITAIANMNG-------IISLAPGGMGPAMMCEMIKRNDLLR 301 (417)
T ss_dssp BCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEECCHHHHHHHHHHHH-------HHCCCCCSHHHHHHHHHHHTTCHHH
T ss_pred cccccccCCCCCEEEEEechh-ccCCCcceEEEEeCHHHHHHHHHhhc-------ceeeCCCcHHHHHHHHHHcCcchHH
Confidence 1122356789999999 56666 8999998877766654321 112234555555555555511 11
Q ss_pred hHHH-HHHHHHHHHHHHHHHHhhccC--ceEEeCCCCCCCCceEEEEEcc--cChhHHHHHh--CCeEEcccccCCCCCC
Q psy15216 254 EMKE-ELKRILFLQKRLYNGLMESIE--EIYINGDMNNRIPHNLNISFNF--IEGESLLMAI--KDIAVSSGSACTSASL 326 (2602)
Q Consensus 254 ~~~~-~~~~~~~l~~~l~~~L~~~~~--g~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~L--~gI~v~~g~~~~~~~~ 326 (2602)
...+ ..+++.++++.+.+.|.+.++ ++.+..+.. ....++.++. .+..++...| +||.+++|..|.++..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~ 378 (417)
T 3g7q_A 302 LSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEG---AIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLD 378 (417)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCB---SSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCc---ceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCc
Confidence 1222 566677777788888766445 466654432 2344455553 4667777766 7999999988865310
Q ss_pred ChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 327 EPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 327 ~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
. ......+++|||++. +++++++++++|++.
T Consensus 379 ~----------~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~ 409 (417)
T 3g7q_A 379 K----------PWPHTHQCMRMNYVP--EPDKIEAGVKILAEE 409 (417)
T ss_dssp S----------CCGGGGGEEEEESCS--CHHHHHHHHHHHHHH
T ss_pred c----------ccccCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 0 000113799999985 899999999999864
No 286
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.87 E-value=2.2e-21 Score=254.92 Aligned_cols=319 Identities=15% Similarity=0.123 Sum_probs=231.3
Q ss_pred CCCCHHHHHHHHHHHhhc--cCCCCCccchhHHHHHHHHHHHHHHHHHHhC------CCC-CcEEEeCCHHHHHHHHHHh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADP-REIIWTSGATESNNLAIKG 1473 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~--~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g------~~~-~~iv~t~gaT~al~~al~~ 1473 (2602)
.+.++.+.+++.+.+... ..++... ...++|+.++++++ +++ ++|++|+|+++|+..++.+
T Consensus 35 ~~~~~~v~~a~~~~~~~~~~~~y~~~~----------g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~ 104 (410)
T 3e2y_A 35 ISPPSYVKEELSKAAFIDNMNQYTRGF----------GHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQG 104 (410)
T ss_dssp SCCCHHHHHHHHHHHTCGGGGSCCCTT----------CCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCccccCCCCCC----------ChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHH
Confidence 467889999999988642 2233220 13456667777665 566 7899999999999999999
Q ss_pred hhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccC-----------CCCCcChhHHHhhccCCceEEEEeccc
Q psy15216 1474 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-----------NNGLITLSQLEEKICSDTILVSVMLVN 1542 (2602)
Q Consensus 1474 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-----------~~~~id~d~l~~~i~~~t~lv~l~~~~ 1542 (2602)
+. ++||+|+++.|.|+++...+... |.+++.++.+ .++.+|++++++++++++++|++++|+
T Consensus 105 ~~----~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~ 177 (410)
T 3e2y_A 105 LV----DPGDEVIIMVPFYDCYEPMVRMA---GAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPH 177 (410)
T ss_dssp HC----CTTCEEEEEESCCTTHHHHHHHT---TCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSC
T ss_pred hc----CCCCEEEEeCCCchhhHHHHHHc---CCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCCC
Confidence 86 89999999999999987766554 9999999875 245589999999999999999999999
Q ss_pred cccccccC---hHHHHHHhhhcCCEEEEecccccCc----ccccCCC----CCccEEEEccccccCCCc--eEEEEEecC
Q psy15216 1543 NEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGK----IDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRN 1609 (2602)
Q Consensus 1543 n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~----~~~~l~~----~~~D~~v~S~~K~~gp~G--~G~l~~~~~ 1609 (2602)
||||.++| +++|+++|++||+++|+|++|+... .+.++.. .+.++++.|+||.+|++| +||++++++
T Consensus 178 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~ 257 (410)
T 3e2y_A 178 NPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAH 257 (410)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHH
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHH
Confidence 99999974 8899999999999999999997422 1222221 234588899999888777 899999887
Q ss_pred CCCccccccccCCccccCCCCCcchhHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC
Q psy15216 1610 PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-------ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDM 1682 (2602)
Q Consensus 1610 ~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~-------~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~ 1682 (2602)
+++.+..... ....+.+...+.++..+|+. ....+++..+++.++++++.+.|.+ . ++.+..+.
T Consensus 258 ~~~~~~~~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~ 328 (410)
T 3e2y_A 258 LIKHLQTVQQ-------NSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNS-V-GLKPIVPD 328 (410)
T ss_dssp HHHHHHHHHH-------TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHT-T-TCEEEBCS
T ss_pred HHHHHHHHHH-------hhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCC
Confidence 6665543321 12335566666666677652 1335778888999999999999987 3 77765443
Q ss_pred CCCCCceEEEEEecCC------------cHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecC
Q psy15216 1683 NNRIPHNLNISFNFIE------------GESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG 1747 (2602)
Q Consensus 1683 ~~~~~~~~~~~~~~~~------------~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~ 1747 (2602)
.. ....+.+.... ..++...+ +||.+.+|..|.... ......+++|||++
T Consensus 329 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~------------~~~~~~~~iRis~~ 393 (410)
T 3e2y_A 329 GG---YFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSK------------SKPHFEKLVRFCFI 393 (410)
T ss_dssp BS---SEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTT------------THHHHTTEEEEECC
T ss_pred cc---EEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCC------------CCCCCCCEEEEEEc
Confidence 22 22333333211 12444433 699999999885420 00112489999988
Q ss_pred CCCCHHHHHHHHHHHHH
Q psy15216 1748 RFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1748 ~~~t~edid~li~~L~~ 1764 (2602)
. +.+++++++++|++
T Consensus 394 ~--~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 394 K--KDSTLDAAEEIFRA 408 (410)
T ss_dssp C--CHHHHHHHHHHHHT
T ss_pred C--CHHHHHHHHHHHHh
Confidence 5 99999999999985
No 287
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.87 E-value=5.7e-22 Score=263.25 Aligned_cols=343 Identities=11% Similarity=0.022 Sum_probs=229.3
Q ss_pred eccCCCCCCCHHHHHHHHHHHhhccCC-------CCCccchhHHHHHHHHHHHHHHHHHHh------CCCCCcEEEeCCH
Q psy15216 1397 VFKDATTPIDPRVVDKMIPYLRVQFGN-------PASRNHIYGWTAEKAIEKARNEVAQLI------YADPREIIWTSGA 1463 (2602)
Q Consensus 1397 ~L~~~~~~~~~~v~eal~~~l~~~~~n-------p~~~~~~~~~~~~~~~~~lr~~ia~~~------g~~~~~iv~t~ga 1463 (2602)
.|.......++.+.+++.+.+.....+ ++...+..++.......++|+++++++ ++++++|++|+|+
T Consensus 36 ~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 115 (444)
T 3if2_A 36 MLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGS 115 (444)
T ss_dssp ECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSH
T ss_pred ccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCc
Confidence 444333334556666666666654444 420011222222233567888888887 5688899999999
Q ss_pred HHHHHHHHHhhhhhhccCCC--------------EEEEc-CCCCcchHHHHH---HHHhCCcEEEEeccCC-C----CCc
Q psy15216 1464 TESNNLAIKGAAHFYKKRGK--------------HIITV-QTEHKSVLDSIR---KLENDGFRVTYLKPKN-N----GLI 1520 (2602)
Q Consensus 1464 T~al~~al~~l~~~~~~~gd--------------~Vlv~-~~~~~s~~~~~~---~~~~~G~~v~~v~~~~-~----~~i 1520 (2602)
|+|+++++.++. ++|| +|+++ +|+|+++..... .+...|..+..++.+. + +.+
T Consensus 116 t~al~~~~~~l~----~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 191 (444)
T 3if2_A 116 QNAFFYLFNLFG----GAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRV 191 (444)
T ss_dssp HHHHHHHHHHSS----EEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEEC
T ss_pred HHHHHHHHHHHh----CCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCC
Confidence 999999999987 7887 78886 899998765321 1233478888888775 2 368
Q ss_pred ChhHHHhh---ccCCceEEEEeccccccccccC---hHHHHHHhhhcCCEEEEecccccCccccc-----CCCCCccEEE
Q psy15216 1521 TLSQLEEK---ICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKIDIN-----IQNYKVDLMS 1589 (2602)
Q Consensus 1521 d~d~l~~~---i~~~t~lv~l~~~~n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~~~~-----l~~~~~D~~v 1589 (2602)
|+++|+++ ++++|++|++++|+||||.++| +++|+++|++||+++|+|++|+.+..... ....+.++++
T Consensus 192 d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~ 271 (444)
T 3if2_A 192 DFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILC 271 (444)
T ss_dssp CHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEE
T ss_pred CHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEE
Confidence 99999998 7889999999999999999999 88899999999999999999975322111 1223567999
Q ss_pred EccccccCCCc--eEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHH--HHHHHHH-HHHHHHHHHHH
Q psy15216 1590 FSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL--ARIEMKE-ELKRILFLQKR 1664 (2602)
Q Consensus 1590 ~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~--~~~~~~~-~~~~~~~l~~~ 1664 (2602)
.|+||+ +++| +||++.++++++.+...... ...+.+...+.++..++.. ......+ ..+++.++++.
T Consensus 272 ~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 343 (444)
T 3if2_A 272 FSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAV-------VNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATL 343 (444)
T ss_dssp EESTTT-TCGGGCCEEEECCHHHHHHHHHHHHH-------HHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHH
T ss_pred echhhc-cCCCCceEEEEECHHHHHHHHHHHHh-------ccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence 999996 5555 89999887666555432211 0123344445555455551 1122222 55666777777
Q ss_pred HHHHHhhcCC--cEEEeCCCCCCCCceEEEEEec--CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCcccc
Q psy15216 1665 LYNGLMESIE--EIYINGDMNNRIPHNLNISFNF--IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELA 1738 (2602)
Q Consensus 1665 l~~~L~~~~~--gl~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 1738 (2602)
+.+.|.+.++ ++.+..+.. .....+.++. .+..++...| +||.+++|..|......++ ....
T Consensus 344 ~~~~l~~~l~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~---------~~~~ 411 (444)
T 3if2_A 344 AVKLLKQALGDYPLMIHKPEG---AIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSD---------YQHA 411 (444)
T ss_dssp HHHHHHHHSSSSSEEEECCCB---SSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTT---------CSGG
T ss_pred HHHHHHHhcccCCceEecCCc---cEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcc---------cccC
Confidence 7777766444 456554322 2334455553 4566777666 8999999998864310000 0122
Q ss_pred CCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1739 HSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1739 ~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.+++|||++. +.+++++++++|++.
T Consensus 412 ~~~iRis~~~--~~e~i~~~l~~l~~~ 436 (444)
T 3if2_A 412 HECIRMSIAA--DEQTLIDGIKVIGEV 436 (444)
T ss_dssp GSEEEEESSS--CHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeC--CHHHHHHHHHHHHHH
Confidence 4789999996 899999999999974
No 288
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.87 E-value=4.8e-21 Score=250.87 Aligned_cols=304 Identities=12% Similarity=0.077 Sum_probs=214.3
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHH-HHhCCcEEEEeccC
Q psy15216 1437 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKPK 1515 (2602)
Q Consensus 1437 ~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~~ 1515 (2602)
....++|+++++++|.+ ++++++|+|+|++.++.++. ++||+|+++.++|+++...+.. +...|+++++++.
T Consensus 56 ~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~al~~l~----~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 128 (412)
T 2cb1_A 56 PTAKALEERLKALEGAL--EAVVLASGQAATFAALLALL----RPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP- 128 (412)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTC----CTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS-
T ss_pred hHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-
Confidence 45789999999999975 89999999999999999986 7999999999999988777654 4556999999975
Q ss_pred CCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccccc
Q psy15216 1516 NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKI 1595 (2602)
Q Consensus 1516 ~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~ 1595 (2602)
|+++|+++++++|++|++++++||||.+.|+++|.++|++||+++|+|++|+.+.........++|++++|+||+
T Consensus 129 -----~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~ 203 (412)
T 2cb1_A 129 -----EPEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKW 203 (412)
T ss_dssp -----SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTT
T ss_pred -----CHHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCccc
Confidence 389999999999999999999999999999999999999999999999999887222222245789999999996
Q ss_pred c-CCCc-eEEEEEecCCCC-----cccc-ccccC---------Ccccc------CCCCC-cchhHHHHHHHHHHHHHHHH
Q psy15216 1596 Y-GPKG-IGALYIRRNPRT-----RIEA-QIHGG---------GHEYG------LRSGT-LATHQIVGMGEAFRLARIEM 1651 (2602)
Q Consensus 1596 ~-gp~G-~G~l~~~~~~~~-----~l~~-~~~g~---------~~~~~------~~~gt-~~~~~~~al~~aL~~~~~~~ 1651 (2602)
+ +|.+ +|++++.++... .+.+ ...|+ ..... ...|. .+....+....+++ .+
T Consensus 204 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~----~l 279 (412)
T 2cb1_A 204 ASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLE----TV 279 (412)
T ss_dssp TTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGG----GH
T ss_pred ccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCc----hH
Confidence 6 4555 788887663211 1111 10110 00000 00121 12211111112222 23
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCcEEEe-CCCC-------------CCCCceEEEEEecCCcHHHHHhc--CCEEEcccc
Q psy15216 1652 KEELKRILFLQKRLYNGLMESIEEIYIN-GDMN-------------NRIPHNLNISFNFIEGESLLMAI--KDIAVSSGS 1715 (2602)
Q Consensus 1652 ~~~~~~~~~l~~~l~~~L~~~~~gl~i~-~~~~-------------~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~ 1715 (2602)
....++..++.+++.+.|.+ .+++... .|.. ...+.+..|.+ + +.+.+...+ .+|.+ .++
T Consensus 280 ~~~~~~~~~~~~~l~~~L~~-~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~-~~~~~~~~l~~~~i~~-~~s 355 (412)
T 2cb1_A 280 ALRVARMSETARFLAERLQG-HPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G-DLERASRFLGAIRLLK-AAN 355 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-CTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S-SHHHHHHHHHHCSSEE-CSC
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C-CHHHHHHHHHhCCeee-ecc
Confidence 45556667888999999987 6777633 2221 12345566666 4 444444444 68888 773
Q ss_pred ---------ccCCCC--CChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1716 ---------ACTSAS--LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1716 ---------~~~~~~--~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
+|.... ..++..+..+|+. .+.||+|++.+++.++|++++++|++
T Consensus 356 ~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~----~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 356 LGDARTLLVHPWTTTHSRLKEEARLQAGVT----PGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp CSCSSCEEECTTTTTTTTSCHHHHHHTTCC----TTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred cCCCcceeecCcccccccCCHHHHHhcCCC----CCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 554332 1345666677775 38999999999999999999999974
No 289
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.87 E-value=1e-21 Score=256.04 Aligned_cols=330 Identities=15% Similarity=0.100 Sum_probs=230.0
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
..++.+.+++.+.+...+.. . ..+...++|+.+++++|.+ ++++++|+|+|+++++.++. +++||
T Consensus 33 ~~~~~~~~a~~~~~~~~~~~-~---------~~~~~~~l~~~la~~~~~~--~~i~~~~gt~al~~~l~~~~---~~~gd 97 (391)
T 3dr4_A 33 RLDGNERDYVLECMDTTWIS-S---------VGRFIVEFEKAFADYCGVK--HAIACNNGTTALHLALVAMG---IGPGD 97 (391)
T ss_dssp CCCSSHHHHHHHHHHHTCCS-S---------CSHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHT---CCTTC
T ss_pred CCCHHHHHHHHHHHHcCCcc-C---------CChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcC---CCCcC
Confidence 45678888988887653211 0 1135788999999999976 88999999999999999983 27999
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccC-CCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcC
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g 166 (2602)
+|+++.++|+++...+... |++++.++++ +++.+|++++++++++++++|+ ++||||.+.|+++|.++|++||
T Consensus 98 ~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~ 171 (391)
T 3dr4_A 98 EVIVPSLTYIASANSVTYC---GATPVLVDNDPRTFNLDAAKLEALITPRTKAIM---PVHLYGQICDMDPILEVARRHN 171 (391)
T ss_dssp EEEEESSSCTHHHHHHHHT---TCEEEEECBCTTTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTT
T ss_pred EEEECCCchHHHHHHHHHC---CCEEEEEecCccccCcCHHHHHHhcCCCceEEE---EECCCCChhhHHHHHHHHHHcC
Confidence 9999999999998777655 9999999988 4678999999999999999888 4678999999999999999999
Q ss_pred CEEEEecccccccccccC--CCCCccEEEec--cccccCCCCcEEEEEecC-CCCcccceecCCCcc-cccc---cc-Cc
Q psy15216 167 VIFHCDAAQAVGKIDINI--QNYKVDLMSFS--AHKIYGPKGIGALYIRRN-PRTRIEAQIHGGGHE-YGLR---SG-TL 236 (2602)
Q Consensus 167 ~~livD~a~a~g~~~~dl--~~~~~D~~~~S--~~K~~Gp~G~G~l~~~~~-~~~~l~~~~~g~~~~-~~~~---~g-t~ 236 (2602)
+++|+|++|+.|....+. ..+ .|+.++| .||++++...|+++.+++ +.+.+.+...++... ..+. .| ..
T Consensus 172 ~~li~D~a~~~g~~~~~~~~~~~-~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~ 250 (391)
T 3dr4_A 172 LLVIEDAAEAVGATYRGKKSGSL-GDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNY 250 (391)
T ss_dssp CEEEEECTTCTTCEETTEETTSS-SSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBC
T ss_pred CEEEEECcccccceECCeeeccc-CCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCCCCccccccccccc
Confidence 999999999987654332 222 3666666 558665433677777653 444444443322210 0010 11 11
Q ss_pred chhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCC--CCC--CCCceEEEEEcc---cChhHHHH
Q psy15216 237 ATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGD--MNN--RIPHNLNISFNF---IEGESLLM 308 (2602)
Q Consensus 237 ~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~--~~~--~~~~~~~~~~~~---~~~~~~~~ 308 (2602)
.. ..+.+++.+ ...++++..++.+++++++.+.|.+ . ++.+..+ +.. .....+.+.++. .+..++.+
T Consensus 251 ~~---~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 325 (391)
T 3dr4_A 251 RM---TNIQAAIGLAQLERVDEHLAARERVVGWYEQKLAR-L-GNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIK 325 (391)
T ss_dssp BC---CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGG-G-TTSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHH
T ss_pred CC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-C-CccccCcCCCCCCcceeEEEEEEECCccchhHHHHHH
Confidence 22 222233332 2345778889999999999999988 4 7776654 222 222344555553 45677777
Q ss_pred Hh--CCeEEcccc---cCCCCCCChHHHH---HHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 309 AI--KDIAVSSGS---ACTSASLEPSYVL---RALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 309 ~L--~gI~v~~g~---~~~~~~~~~~~~~---~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.| +||.++++. +|.+. +.. ..++..+....+.+|++++.++|++||++++++|++.
T Consensus 326 ~L~~~GI~v~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 326 DLDALGIESRPVFHPMHIMPP-----YAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp HHHHTTCCCEECCCCGGGSGG-----GGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred HHHHCCCceeecCCccccChh-----hhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 77 799999775 33321 110 0011111222468999999999999999999999863
No 290
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.87 E-value=1.6e-21 Score=254.87 Aligned_cols=321 Identities=15% Similarity=0.122 Sum_probs=222.5
Q ss_pred CCCCCC-CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHH--hC-CCCCcEEEeCCHHHHHHHHHHh
Q psy15216 2 DYSATT-PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQL--IY-ADPREIIWTSGATESNNLAIKG 77 (2602)
Q Consensus 2 d~a~~~-~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~--~g-~~~~~Iv~t~g~T~al~~~~~~ 77 (2602)
+.+... ++++.+.+++.+.+......... +.++ ......++|++++++ +| +++++|++++|+++++++++..
T Consensus 39 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~--~~y~--~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~~~ 114 (400)
T 3asa_A 39 SIGDTTQPLNASVAEAFASSIARLSSPTTC--RGYG--PDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLLSF 114 (400)
T ss_dssp SSCCCCCCCCHHHHHHHHHHHHHHTSSSCC--CCCC--CTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHhcccccccc--cCCC--CCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHHHH
Confidence 334443 67889999999988653211111 1111 112356789999999 57 6788999999999999987643
Q ss_pred cccccccCCCEEEEcCCCCcccHHHHHHHHhCCcE-EEEeccCCCCccChHHHHhhccCCceEEEEecccCccccccc--
Q psy15216 78 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFR-VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP-- 154 (2602)
Q Consensus 78 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~-v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~-- 154 (2602)
. ++||+|+++.|.|+++...+.. .|++ ++.++.++++.++.+ +++. +++++|++++|+||||.++|
T Consensus 115 -~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~-l~~~--~~~~~v~l~~p~nptG~~~~~~ 183 (400)
T 3asa_A 115 -F----GPNQTVAIQDPSYPAYLDIARL---TGAKEIIALPCLQENAFFPE-FPED--THIDILCLCSPNNPTGTVLNKD 183 (400)
T ss_dssp -H----CSSCEEEEEESCCHHHHHHHHH---TTCSEEEEEECCGGGTTCCC-CCTT--CCCSEEEEESSCTTTCCCCCHH
T ss_pred -c----CCCCEEEECCCCcHHHHHHHHH---cCCcceEecccchhcCcccC-hhhc--cCccEEEEeCCCCCCCCcCCHH
Confidence 3 5899999999999997766544 4887 888887653322221 2221 67899999999999999998
Q ss_pred -HHHHHHHHHhcCCEEEEecccc-cc---cccccCCCC----CccEEEeccccccCCCC--cEEEEEecCCC-------C
Q psy15216 155 -ILEIGELCRSKGVIFHCDAAQA-VG---KIDINIQNY----KVDLMSFSAHKIYGPKG--IGALYIRRNPR-------T 216 (2602)
Q Consensus 155 -l~~I~~la~~~g~~livD~a~a-~g---~~~~dl~~~----~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~-------~ 216 (2602)
+++|+++|+++|+++|+|++|+ +. ..+..+..+ +.++++.|+||.+|++| +||+++++++. .
T Consensus 184 ~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~ 263 (400)
T 3asa_A 184 QLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVI 263 (400)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHH
T ss_pred HHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHH
Confidence 5568889999999999999998 32 222333322 23588999999999888 79999988763 2
Q ss_pred cccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEE
Q psy15216 217 RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNI 296 (2602)
Q Consensus 217 ~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~ 296 (2602)
.+.... .....++++.+...++.++|+.. ++++.+++++++++++.+.|.+ . ++.+..+.. ..++.+
T Consensus 264 ~~~~~~------~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~ 330 (400)
T 3asa_A 264 QDWERF------LSTTFNGASIPAQEAGVAGLSIL--PQLEAIHYYRENSDLLRKALLA-T-GFEVFGGEH---APYLWV 330 (400)
T ss_dssp HHHHHH------HHHHCCCCCHHHHHHHHHHHHHT--TTCHHHHHHHHHHHHHHHHHHH-T-TCEEEECSS---SSEEEE
T ss_pred HHHHHH------hccCccCCChHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHH-C-CCeeeCCCC---ceEEEE
Confidence 221100 01112456777777666676632 5678888999999999999987 3 777764432 233444
Q ss_pred E-Ec-ccChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 297 S-FN-FIEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 297 ~-~~-~~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
. ++ ..+..++...| +||.+++|..|.+. ..+++||++ +++++++++++++|++.
T Consensus 331 ~~~~~~~~~~~~~~~l~~~~gv~v~~g~~f~~~-----------------~~~~iRis~--~~~~e~i~~~l~~l~~~ 389 (400)
T 3asa_A 331 KPTQANISDRDLFDFFLREYHIAITPGIGFGRS-----------------GSGFVRFSS--LGKREDILAACERLQMA 389 (400)
T ss_dssp ECCCTTCCTTTHHHHHHHHHSEECEEGGGGCGG-----------------GTTCEEEEC--CSCHHHHHHHHHHHHC-
T ss_pred eccCCCCCHHHHHHHHHHhCCEEEeChhHhCCC-----------------CCCEEEEEe--eCCHHHHHHHHHHHHHH
Confidence 4 44 23455566555 49999999877531 137899994 57999999999999863
No 291
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.87 E-value=2.7e-21 Score=248.74 Aligned_cols=328 Identities=13% Similarity=0.040 Sum_probs=211.2
Q ss_pred ccCCceEEEEEcCcccEEEEEEE--CCeeEEEeCCCCCccccEEEEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCC
Q psy15216 633 VKNKCVSIGIDFGTTNSLVAIVR--NNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIAR 710 (2602)
Q Consensus 633 ~~~~~~vvGID~GTt~s~va~~~--~~~~~ii~~~~g~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~ 710 (2602)
|..+.+++|||+|||+.++.+.+ +++.+++. -...||- .. .+| .++-..+..+..+ ..+....+..|.
T Consensus 4 m~~~~~ivglDIGts~I~~vv~~~~~~~~~i~g----~~~~~s~-gv-~~G-~I~di~~~~~~I~---~av~~ae~~~g~ 73 (419)
T 4a2a_A 4 LSKTVFYTSIDIGSRYIKGLVLGKRDQEWEALA----FSSVKSR-GL-DEG-EIKDAIAFKESVN---TLLKELEEQLQK 73 (419)
T ss_dssp ---CCEEEEEEECSSEEEEEEEEC----CEEEE----EEEEECC-SE-ETT-EESBHHHHHHHHH---HHHHHHHHHHTS
T ss_pred CccCCEEEEEEccCCEEEEEEEEEcCCCCEEEE----EEEeccC-Ce-eCC-EEEcHHHHHHHHH---HHHHHHHHHcCC
Confidence 44567999999999999988775 22224442 2233432 11 232 3443333322221 334444555565
Q ss_pred CCCC-CCCCCCCe--eeecCCCceEEEEeCceeCHHHHHHHHHHHHHHHHHHhhcCccceEEE-EEcCCC----------
Q psy15216 711 DLKN-INTNSFPY--DFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVI-TVPAYF---------- 776 (2602)
Q Consensus 711 ~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~Vi-TVPa~f---------- 776 (2602)
+... +......- .+...+....+...++.++.+++-..+ +.+... ..+....++ .+|-.|
T Consensus 74 ~i~~~v~v~i~g~~~~i~s~~~~~~i~~~~~~i~~~di~~~i-----~~a~~~-~~p~d~~~l~~~p~~f~vDg~~~i~~ 147 (419)
T 4a2a_A 74 SLRSDFVISFSSVSFEREDTVIERDFGEEKRSITLDILSEMQ-----SEALEK-LKENGKTPLHIFSKRYLLDDERIVFN 147 (419)
T ss_dssp CCCSEEEEEECCTTCEEEEEEEEEECCSSCEECCHHHHHHHH-----HHHHHH-HSCTTEEEEEEEEEEEEETTTEEESC
T ss_pred CcCceEEEEEcCCcCeEEEEEeEEEEeCCCCEECHHHHHHHH-----HHhhhh-cCCCCCEEEEEEeeEEEECCccCcCC
Confidence 5433 21110000 111000000111123466666665443 333322 223333333 233322
Q ss_pred ------------------CHHHHHHHHHHHHHcCCceEEEechhHHHHHHhhhccCcccceEEEEEeCCceEEEEEEEEE
Q psy15216 777 ------------------NDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFK 838 (2602)
Q Consensus 777 ------------------~~~qr~~~~~Aa~~AGl~~~~li~EPtAAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~ 838 (2602)
.....+.+.+|++.|||++..++.||+|||++|.... .++..++|+|+||||||+++++
T Consensus 148 P~Gm~g~~l~~~v~~v~~~~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~-~~~~gv~vvDiGggttdisi~~-- 224 (419)
T 4a2a_A 148 PLDMKASKIAIEYTSIVVPLKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP-EKDRGVVVVNLGYNFTGLIAYK-- 224 (419)
T ss_dssp CTTCEESEEEEEEEEEEEEHHHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH-HHHHCEEEEEECSSSEEEEEEE--
T ss_pred CCCCcccEEEEEEEEEEEeHHHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc-cccCCEEEEEECCCcEEEEEEE--
Confidence 2346688999999999999999999999999885432 2456899999999999999987
Q ss_pred CCEEEEEEEecCCCCcchHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHcccc-----cceEEEEEecCCceEE
Q psy15216 839 NGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQ-----SSVKLNVKLSDKKIVN 913 (2602)
Q Consensus 839 ~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~-----~~~~~~i~~~~~~~~~ 913 (2602)
++.+.. .++.++||++||+.|...+.- ....||++|+.++.. .+..+.++..++ ...
T Consensus 225 ~g~~~~---~~~i~~GG~~it~dIa~~l~~--------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~-~~~ 286 (419)
T 4a2a_A 225 NGVPIK---ISYVPVGMKHVIKDVSAVLDT--------------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG-NTI 286 (419)
T ss_dssp TTEEEE---EEEESCCHHHHHHHHHHHHTC--------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS-CSE
T ss_pred CCEEEE---EEecccHHHHHHHHHHHHHCC--------------CHHHHHHHHHHhccCcccCCCCceEEEeecCC-ccc
Confidence 555433 345789999999999875432 247899999998752 345667765444 356
Q ss_pred EEeCHHHHHHHHHHHHHHHHHHHHHHHHHcCC------CccccceEEEecCccchHHHHHHHHhhccCccc--C-----c
Q psy15216 914 ITIDMKQFFTITQHLVNRTILLSSKALMDANL------TIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL--T-----S 980 (2602)
Q Consensus 914 ~~itr~~fe~l~~~~~~~~~~~i~~~l~~a~~------~~~~i~~V~LvGG~sr~P~v~~~l~~~f~~~~~--~-----~ 980 (2602)
.+++|++|+++++|.++++.+.+++.|+.++. ....++.|+|+||+|++|.+++.+++.|+.++. . +
T Consensus 287 ~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p 366 (419)
T 4a2a_A 287 KTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDR 366 (419)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSS
T ss_pred eEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCc
Confidence 88999999999999999999999999999987 355689999999999999999999999976543 2 1
Q ss_pred ----------CCcchHhHHHHHHHhHH
Q psy15216 981 ----------IDPDKAVVFGAAIQANF 997 (2602)
Q Consensus 981 ----------~~p~~aVa~GAa~~a~~ 997 (2602)
.+|..+++.|.++++..
T Consensus 367 ~~~~~~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 367 PSIINADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp CCCBTCHHHHTCGGGHHHHHTTCC---
T ss_pred hhccCcccccCCchHHHHHHHHHHHhh
Confidence 48999999999998743
No 292
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.87 E-value=1.7e-21 Score=253.96 Aligned_cols=330 Identities=14% Similarity=0.155 Sum_probs=231.4
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCE
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 1484 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~ 1484 (2602)
.++++.+++.+.++..+.++. + ....++|+.+++++|. +++++++|+|+|++.++.++. +++||+
T Consensus 10 ~~~~v~~a~~~~~~~~~~~~~------g----~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~~~~l~---~~~gd~ 74 (394)
T 1o69_A 10 MGGNELKYIEEVFKSNYIAPL------G----EFVNRFEQSVKDYSKS--ENALALNSATAALHLALRVAG---VKQDDI 74 (394)
T ss_dssp --CCHHHHHHHHHHHTTTSCT------T----HHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTT---CCTTCE
T ss_pred CCHHHHHHHHHHHHcCCccCC------C----hHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcC---CCCCCE
Confidence 345778888888865332211 1 3468899999999997 589999999999999999982 279999
Q ss_pred EEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC---CceEEEEeccccccccccChHHHHHHhhhc
Q psy15216 1485 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQPILEIGELCRSK 1561 (2602)
Q Consensus 1485 Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~---~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~ 1561 (2602)
|+++.++|+++...+... |++++.++.+.++.+|+++|++++++ ++++|++++ |||...|+++|.++|++|
T Consensus 75 Vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~ 148 (394)
T 1o69_A 75 VLASSFTFIASVAPICYL---KAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKEN 148 (394)
T ss_dssp EEEESSSCGGGTHHHHHT---TCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHT
T ss_pred EEECCCccHHHHHHHHHc---CCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHc
Confidence 999999999998877665 99999999987788999999999986 799999986 699999999999999999
Q ss_pred CCEEEEecccccCcccccCC--C-CCccEEEEccccccCCCceEEEEEe-cCCCCccccccccCC--------ccccCCC
Q psy15216 1562 GVIFHCDAAQAVGKIDINIQ--N-YKVDLMSFSAHKIYGPKGIGALYIR-RNPRTRIEAQIHGGG--------HEYGLRS 1629 (2602)
Q Consensus 1562 gi~vivD~a~~~g~~~~~l~--~-~~~D~~v~S~~K~~gp~G~G~l~~~-~~~~~~l~~~~~g~~--------~~~~~~~ 1629 (2602)
|+++|+|++|+.|....+.. . .++|++++|.||.+++.++|+++++ +++++.+.+...++. ...++..
T Consensus 149 ~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~ 228 (394)
T 1o69_A 149 DIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNY 228 (394)
T ss_dssp TCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBC
T ss_pred CCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCccc
Confidence 99999999999765433221 1 2467888888997777779999996 565555544322111 1123334
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCC--CCCceEEEEEecC----------
Q psy15216 1630 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN--RIPHNLNISFNFI---------- 1697 (2602)
Q Consensus 1630 gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~--~~~~~~~~~~~~~---------- 1697 (2602)
++++....+++.. ++ .+++..++.+++++++.+.|.+ . +.+.++... ....+..+.++..
T Consensus 229 ~~~~~~aa~~l~~-l~----~l~~~~~~~~~~~~~l~~~L~~-~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 300 (394)
T 1o69_A 229 RLSNVLGAIGVAQ-ME----VLEQRVLKKREIYEWYKEFLGE-Y--FSFLDELENSRSNRWLSTALINFDKNELNACQKD 300 (394)
T ss_dssp BCCHHHHHHHHHH-HT----THHHHHHHHHHHHHHHHHHHTT-T--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEE
T ss_pred CcCHHHHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHhcc-c--ccccCCCCCCcceeEEEEEEecchhhcccccccc
Confidence 4555555554432 33 3456778889999999999987 3 655543221 1112345555521
Q ss_pred ------------CcHHHHHhc--CCEEEccccccCCCCCChhHHHH---HcCCCccccCCeEEEecCCCCCHHHHHHHHH
Q psy15216 1698 ------------EGESLLMAI--KDIAVSSGSACTSASLEPSYVLR---ALGCNDELAHSSIRFTIGRFTTEKEIDFTIK 1760 (2602)
Q Consensus 1698 ------------~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~iRls~~~~~t~edid~li~ 1760 (2602)
+..++...| +||.++++..|... .+.+... .+..+.....+.+|+++++++|.+|++++++
T Consensus 301 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~ 378 (394)
T 1o69_A 301 INISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHT--QEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISK 378 (394)
T ss_dssp EECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGG--CGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHH
T ss_pred ccccccccccccCHHHHHHHHHHcCCcccccCCcccc--chhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHH
Confidence 345666666 89999988544211 1111000 0011111122567888899999999999999
Q ss_pred HHHHh
Q psy15216 1761 LLKMK 1765 (2602)
Q Consensus 1761 ~L~~~ 1765 (2602)
+|++.
T Consensus 379 ~l~~~ 383 (394)
T 1o69_A 379 LILKS 383 (394)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99974
No 293
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.87 E-value=7.2e-22 Score=213.95 Aligned_cols=124 Identities=42% Similarity=0.682 Sum_probs=116.9
Q ss_pred eeccccccceEEeeccEEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCCCCCcc
Q psy15216 2406 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 2485 (2602)
Q Consensus 2406 ~~d~~~~~~gi~~~~~~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~ 2485 (2602)
+.|++|+|||+++.+|.|.+||+||++||+++++.|+|..|||+.+.|.||||++..+.+|.+||+|.|+|+||+|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCccEEEEEEeecCCcEEEEEEecC-CCCChHHHhc
Q psy15216 2486 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPF-YNMNLDEIKN 2529 (2602)
Q Consensus 2486 ~i~v~f~id~~g~l~V~a~~~~tg~~~~~~i~~~-~~l~~~ei~~ 2529 (2602)
+|+|+|+||.||+|+|+|.++.||++.+++|... ++||++||++
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~ 126 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDR 126 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHH
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHH
Confidence 9999999999999999999999999999999987 5699999996
No 294
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.87 E-value=3.5e-22 Score=258.00 Aligned_cols=332 Identities=15% Similarity=0.098 Sum_probs=224.1
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCC
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 1483 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd 1483 (2602)
+.++.+.+++.+.+...+..++ ....++|+.+++++|.+ ++++++|+|+|++.++.++. +++||
T Consensus 13 ~~~~~v~~a~~~~~~~~~~~~~-----------~~~~~l~~~la~~~~~~--~~~~~~sGt~al~~al~~~~---~~~gd 76 (367)
T 3nyt_A 13 RIKDKIDAGIQRVLRHGQYILG-----------PEVTELEDRLADFVGAK--YCISCANGTDALQIVQMALG---VGPGD 76 (367)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSC-----------HHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTT---CCTTC
T ss_pred ccCHHHHHHHHHHHhcCCccCC-----------hHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhC---CCCcC
Confidence 3456778888887765322222 24678999999999975 89999999999999999983 38999
Q ss_pred EEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC-CCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcC
Q psy15216 1484 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG 1562 (2602)
Q Consensus 1484 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~g 1562 (2602)
+|+++.++|+++...+... |+++++++++++ +.+|+++++++++++|++|+ ++||||...|+++|.++|++||
T Consensus 77 ~Vi~~~~~~~~~~~~~~~~---G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la~~~~ 150 (367)
T 3nyt_A 77 EVITPGFTYVATAETVALL---GAKPVYVDIDPRTYNLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIASKYG 150 (367)
T ss_dssp EEEEESSSCTHHHHHHHHT---TCEEEEECBCTTTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTT
T ss_pred EEEECCCccHHHHHHHHHc---CCEEEEEecCCccCCcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHHHHcC
Confidence 9999999999988777655 999999999875 78999999999999999888 6778999999999999999999
Q ss_pred CEEEEecccccCcccccCCCCCc--cEEEEcc--ccccCCCc-eEEEEEec-CCCCccccccccCCccccC---CCC-Cc
Q psy15216 1563 VIFHCDAAQAVGKIDINIQNYKV--DLMSFSA--HKIYGPKG-IGALYIRR-NPRTRIEAQIHGGGHEYGL---RSG-TL 1632 (2602)
Q Consensus 1563 i~vivD~a~~~g~~~~~l~~~~~--D~~v~S~--~K~~gp~G-~G~l~~~~-~~~~~l~~~~~g~~~~~~~---~~g-t~ 1632 (2602)
+++|+|++|+.|.. ++....+. |++++|| ||.+|+.| .|+++.++ ++.+.+.+....+.. ..+ ..| +.
T Consensus 151 ~~li~D~a~~~g~~-~~~~~~~~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~-~~~~~~~~g~~~ 228 (367)
T 3nyt_A 151 IPVIEDAAQSFGAS-YKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQD-RRYHHIRVGVNS 228 (367)
T ss_dssp CCBEEECTTTTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEE-ETTEECSCCCBC
T ss_pred CEEEEECccccCCe-ECCeeccCCCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCC-cCceeeccCcCC
Confidence 99999999998764 22222222 8999996 79887754 67777753 344444443322211 111 011 11
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEE
Q psy15216 1633 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIA 1710 (2602)
Q Consensus 1633 ~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~ 1710 (2602)
....+.+. .++.. ...+++..++.+++++++.+.|.+ . ++.+...+....+....+.+...+.+.+...| +||.
T Consensus 229 ~~~~~~aa-~~~~~-l~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~ 304 (367)
T 3nyt_A 229 RLDTLQAA-ILLPK-LEIFEEEIALRQKVAAEYDLSLKQ-V-GIGTPFIEVNNISVYAQYTVRMDNRESVQASLKAAGVP 304 (367)
T ss_dssp CCCHHHHH-HHHHH-HHTHHHHHHHHHHHHHHHHHHHHH-T-TCCCCCCCTTEECCCSSEEEECSSHHHHHHHHHHHTCC
T ss_pred CccHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHhcc-C-CeeccCCCCCCceeeEEEEEEeCCHHHHHHHHHHCCCc
Confidence 11122111 22221 123566777888889999999987 3 44433222211111222333333566777766 6888
Q ss_pred EccccccCCCCCChhHH--HHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1711 VSSGSACTSASLEPSYV--LRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1711 v~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
++.+... +.+.++.+. ...++.......+.+|++++..+|.+|+++++++|++
T Consensus 305 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 305 TAVHYPI-PLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp CBCSCSS-CGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred eeccCCC-ccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 8765421 111122221 0111122223347899999999999999999999996
No 295
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.87 E-value=7.1e-21 Score=249.71 Aligned_cols=315 Identities=12% Similarity=0.136 Sum_probs=232.8
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
+.++.+.+++.+.+... ..... .+...+...+..+++++++++++|.+ ..++++++++|+..++.++. ++||
T Consensus 73 ~~~p~v~~a~~~~l~~~-~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~~l~~~~----~~gd 144 (409)
T 3kki_A 73 ANHPLIKARLAKSLLEE-QQSLF-MSASFLQNDYDKPMIEKRLAKFTGFD--ECLLSQSGWNANVGLLQTIC----QPNT 144 (409)
T ss_dssp TTCHHHHHHHHHHHHSC-CCCCC-SBGGGGCSTTTSCHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHC----CTTC
T ss_pred cCCHHHHHHHHHHHHHc-CCCCC-ccccccCCcHHHHHHHHHHHHHhCCC--eEEEecchHHHHHHHHHHhc----CCCC
Confidence 46789999999988752 21111 12222222345678999999999976 34556777899999999887 8999
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCcccccccHHHHHHHHHhcC
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l~~I~~la~~~g 166 (2602)
.|+++.+.|+++...+... |++++.++. .|+++|++++++ ++++|++++++||||.+.|+++|.++|++||
T Consensus 145 ~Vl~~~~~~~~~~~~~~~~---g~~~~~~~~-----~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~ 216 (409)
T 3kki_A 145 NVYIDFFAHMSLWEGARYA---NAQAHPFMH-----NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFG 216 (409)
T ss_dssp EEEEETTSCHHHHHHHHHT---TCEEEEECT-----TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHT
T ss_pred EEEECCCcCHHHHHHHHHc---CCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcC
Confidence 9999999999988777665 889888764 589999999975 5899999999999999999999999999999
Q ss_pred CEEEEeccccccccc---------ccCCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCccccccccCcc
Q psy15216 167 VIFHCDAAQAVGKID---------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLA 237 (2602)
Q Consensus 167 ~~livD~a~a~g~~~---------~dl~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~ 237 (2602)
+++|+|++|+.+... .++. .++|+++.|+||.+|+.| |+++.++++++.+...... . ...++++
T Consensus 217 ~~li~De~~~~g~~g~~g~~~~~~~~~~-~~~di~~~s~sK~~~~~g-g~v~~~~~~~~~~~~~~~~----~-~~~~~~~ 289 (409)
T 3kki_A 217 CALLVDESHSLGTHGPNGAGLLAELGLT-REVHFMTASLAKTFAYRA-GAIWCNNEVNRCVPFISYP----A-IFSSTLL 289 (409)
T ss_dssp CEEEEECTTTTTTSSGGGCCHHHHHTCG-GGCSEEEEESSSTTCSSC-EEEEESSSGGGTHHHHCHH----H-HHSBCCC
T ss_pred CEEEEECCccccccCCCCCcchhhcCCC-CCCCEEEeecchhhCCCc-eEEEECHHHHHHHHHhCcC----c-cccCCCc
Confidence 999999999865431 1121 257899999999888775 9999998887766542211 0 1123456
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEccc-ChhHHHHHh--CCeE
Q psy15216 238 THQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-EGESLLMAI--KDIA 314 (2602)
Q Consensus 238 ~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~L--~gI~ 314 (2602)
...++++.++++..... ++.++++.++++++.+.|.+ . ++.+.+ ...+..+.++.. +..++...| +||.
T Consensus 290 ~~~~aa~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~-~-g~~~~~-----~~~~~~~~~~~~~~~~~~~~~L~~~Gv~ 361 (409)
T 3kki_A 290 PYEAAGLETTLEIIESA-DNRRQHLDRMARKLRIGLSQ-L-GLTIRS-----ESQIIGLETGDERNTEKVRDYLESNGVF 361 (409)
T ss_dssp HHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHT-T-TCCCCC-----SSSEEEEEEESHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHH-c-CCccCC-----CCCEEEEEeCCHHHHHHHHHHHHHCCce
Confidence 66777777888865543 67888899999999999987 3 555441 123445555432 344566666 7999
Q ss_pred EcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 315 VSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 315 v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+++...+..+ ...+++||+++.+++++|+++++++|++.
T Consensus 362 v~~~~~~~~~----------------~~~~~iRi~~~~~~t~e~i~~~~~~l~~~ 400 (409)
T 3kki_A 362 GSVFCRPATS----------------KNKNIIRLSLNSDVNDEQIAKIIEVCSDA 400 (409)
T ss_dssp CEEECTTSSC----------------TTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EeeeCCCCcC----------------CCCcEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 8765432111 12478999999999999999999999974
No 296
>2z7e_A ISCU protein, NIFU-like protein; iron-sulfur cluster, iron, biosynthesis, [2Fe-2S], asymmetric trimer, three conserved Cys; 2.30A {Aquifex aeolicus}
Probab=99.87 E-value=1.1e-22 Score=217.63 Aligned_cols=95 Identities=57% Similarity=0.940 Sum_probs=89.1
Q ss_pred hhhhhhhhhhhhhcCCCCcCcccCCCCcceeeeecCCCCccEEEEEEEEc-CCCcEEeeeeeccccchhHhhHHHHHHHH
Q psy15216 1767 FFMSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVN-KNGVITDAKFKTYGCGSAIASSSLVTEWV 1845 (2602)
Q Consensus 1767 ~~~~y~~~i~dh~~~p~~~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~-~~~~i~~~~~~~~gc~~~~a~~s~~~~~~ 1845 (2602)
|.++|+++|+|||+||||+|.+++++ ++++++||+|||.|+|||+|+ ++|+|+|++|+++||+++||||||+||++
T Consensus 1 m~~lY~e~Ildh~~nPrn~G~l~~~d---~~~~~~np~CGD~i~l~lkvd~~~g~I~d~~F~~~GCais~ASaS~mte~v 77 (157)
T 2z7e_A 1 MSFEYNEKVLDHFLNPRNVGVLEDAN---GVGQCGNPACGAAMLFTIKVNPENDVIEDVRFKTFGCGSAIAVSSMLTEMV 77 (157)
T ss_dssp CTTHHHHHHHHHHHSCSSBSCCTTCS---EEEEEEETTTTEEEEEEEEECTTTCBEEEEEEEEESCTTHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHhCCCCCCCCCCCC---eEEEeCCCCCCCEEEEEEEEecCCCeEEEEEEEecCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999887 899999999999999999996 67899999999999999999999999999
Q ss_pred cCCChhhhhcccccchhhh
Q psy15216 1846 KGKTLDEAMSIKNTDIAEE 1864 (2602)
Q Consensus 1846 ~g~~~~~~~~i~~~~i~~~ 1864 (2602)
+|||++||..++++.+.+.
T Consensus 78 ~Gkt~~EA~~i~~~~i~e~ 96 (157)
T 2z7e_A 78 KGKPIQYALNLTYKDIFEE 96 (157)
T ss_dssp TTSBHHHHHHCCHHHHHHH
T ss_pred cCCcHHHHHHHHhccHHHH
Confidence 9999999999998776654
No 297
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.87 E-value=5.2e-21 Score=256.17 Aligned_cols=321 Identities=16% Similarity=0.110 Sum_probs=223.7
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g--~~~~~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
.|..++++..+.+....+. ....|.... ...++|+.+++++ | +++++|++|+|+++|+..++.++.
T Consensus 107 ~p~~~~~~a~~~l~~~~~~-~~~~Y~~~~----G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--- 178 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGR-ATGAYSHSQ----GIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLI--- 178 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTS-CSSSCCCTT----CCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHHcCCCC-cCCCcCCCc----ChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHc---
Confidence 5667777777777653110 111122221 2345566666655 4 578899999999999999999885
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC--CCcChhHHHhhccC------CceEEEEeccccccccccC
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICS------DTILVSVMLVNNEIGVIQP 1550 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~--~~id~d~l~~~i~~------~t~lv~l~~~~n~tG~~~~ 1550 (2602)
.++||+|+++.|.|+++...+..+ |++++.++++++ +.+|+++|++++++ ++++|++++|+||||.+++
T Consensus 179 ~~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s 255 (500)
T 3tcm_A 179 RNEKDGILVPIPQYPLYSASIALH---GGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLA 255 (500)
T ss_dssp CSTTEEEEEEESCCTHHHHHHHHT---TCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCC
T ss_pred CCCCCEEEEeCCCcHhHHHHHHHc---CCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCC
Confidence 268999999999999988777665 999999988754 57999999999986 7899999999999999998
Q ss_pred ---hHHHHHHhhhcCCEEEEecccccCcc-----ccc-------CC--CCCc-cEEEEcccccc-CCCc--eEEEEE---
Q psy15216 1551 ---ILEIGELCRSKGVIFHCDAAQAVGKI-----DIN-------IQ--NYKV-DLMSFSAHKIY-GPKG--IGALYI--- 1606 (2602)
Q Consensus 1551 ---l~~I~~ia~~~gi~vivD~a~~~g~~-----~~~-------l~--~~~~-D~~v~S~~K~~-gp~G--~G~l~~--- 1606 (2602)
+++|+++|++||+++|+|++|+.... ..+ +. .... .+++.|+||.+ |++| +||+++
T Consensus 256 ~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~ 335 (500)
T 3tcm_A 256 EENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGF 335 (500)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESC
T ss_pred HHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCC
Confidence 56677779999999999999875322 111 10 1112 26667999965 7777 799998
Q ss_pred ecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcE
Q psy15216 1607 RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR----------LARIEMKEELKRILFLQKRLYNGLMESIEEI 1676 (2602)
Q Consensus 1607 ~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~----------~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl 1676 (2602)
++++++.+.... ....+++.+.+.++..++. ......+.++++++++++++++.|.+ ++|+
T Consensus 336 ~~~~~~~l~~~~--------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~~g~ 406 (500)
T 3tcm_A 336 SAPVREQIYKIA--------SVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK-LEGI 406 (500)
T ss_dssp CTTHHHHHHHHH--------HTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTE
T ss_pred CHHHHHHHHHHH--------hcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCc
Confidence 666555554322 1124567777777767764 13344677888899999999999988 6898
Q ss_pred EEeCCCCCCCCceEEEEEec----------CCcHH-HH-Hhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeE
Q psy15216 1677 YINGDMNNRIPHNLNISFNF----------IEGES-LL-MAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSI 1742 (2602)
Q Consensus 1677 ~i~~~~~~~~~~~~~~~~~~----------~~~~~-~~-~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 1742 (2602)
.+..+.... ..+..+.++. ...+. +. ..| +||.+.+|..|... ...+++
T Consensus 407 ~~~~~~g~~-~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~----------------~g~~~i 469 (500)
T 3tcm_A 407 TCNEAEGAM-YVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQV----------------PGTWHF 469 (500)
T ss_dssp ECCCCCBTT-EECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCC----------------TTCCBE
T ss_pred EEecCCeEE-EEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCC----------------CCCCEE
Confidence 887443221 1011111111 01111 22 333 69999999988642 113689
Q ss_pred EEecCCCCCHHHHHHHHHHHHH
Q psy15216 1743 RFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1743 Rls~~~~~t~edid~li~~L~~ 1764 (2602)
|++++ ++.+++++++++|++
T Consensus 470 Ris~~--~~~e~i~~~i~~l~~ 489 (500)
T 3tcm_A 470 RCTIL--PQEDKIPAVISRFTV 489 (500)
T ss_dssp EEESC--SCTTTHHHHHHHHHH
T ss_pred EEEEC--CCHHHHHHHHHHHHH
Confidence 99999 788999999999997
No 298
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.87 E-value=4.1e-22 Score=256.86 Aligned_cols=338 Identities=15% Similarity=0.109 Sum_probs=225.0
Q ss_pred ccCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHH-HHHhCCCCCcEEEeCCHHHHHHHHHHhhhh
Q psy15216 1398 FKDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEV-AQLIYADPREIIWTSGATESNNLAIKGAAH 1476 (2602)
Q Consensus 1398 L~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~i-a~~~g~~~~~iv~t~gaT~al~~al~~l~~ 1476 (2602)
+...+.+.++.+++++.+.++..+..+. + ....++++++ ++++| ..+++++++|+|+|+++++.++.
T Consensus 7 ~~~p~~~~~~~i~~a~~~~~~~~~~~~~------~----~~~~~l~~~~~a~~~g-~~~~~v~~~sgt~al~~al~~l~- 74 (377)
T 3ju7_A 7 FLRASTVPVIEYLDELKEIDASHIYTNY------G----PINQRFEQTIMSGFFQ-NRGAVTTVANATLGLMAAIQLKK- 74 (377)
T ss_dssp SCCCCCCCGGGGHHHHHHHHHHTCCSSS------C----HHHHHHHHHHHHHTST-TCSEEEEESCHHHHHHHHHHHHS-
T ss_pred ccCCCCCCcHHHHHHHHHHHHcCCcccC------C----HHHHHHHHHHHHHHhC-CCCeEEEeCCHHHHHHHHHHHcC-
Confidence 3344557778889999998876432221 1 2367899999 99999 34579999999999999999873
Q ss_pred hhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHhhc-cCC--ceEEEEeccccccccccChH
Q psy15216 1477 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKI-CSD--TILVSVMLVNNEIGVIQPIL 1552 (2602)
Q Consensus 1477 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~~i-~~~--t~lv~l~~~~n~tG~~~~l~ 1552 (2602)
+++||+|+++.++|+++..++..+ |++++++++++ ++.+|++++++++ +++ |++|+ ++|++|.+.|++
T Consensus 75 --~~~Gd~Vi~~~~~~~~~~~~~~~~---G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~ 146 (377)
T 3ju7_A 75 --RKKGKYALMPSFTFPATPLAAIWC---GLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLE 146 (377)
T ss_dssp --CTTCCEEEEESSSCTHHHHHHHHT---TCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCH
T ss_pred --CCCcCEEEECCCCcHHHHHHHHHc---CCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHH
Confidence 389999999999999988776655 99999999984 6789999999998 677 89887 456799999999
Q ss_pred HHHHHhhhcCCEEEEecccccCcccccCCCC---CccEEEEc--cccccCCCceEEEEEec-CCCCccccccccCCc---
Q psy15216 1553 EIGELCRSKGVIFHCDAAQAVGKIDINIQNY---KVDLMSFS--AHKIYGPKGIGALYIRR-NPRTRIEAQIHGGGH--- 1623 (2602)
Q Consensus 1553 ~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~---~~D~~v~S--~~K~~gp~G~G~l~~~~-~~~~~l~~~~~g~~~--- 1623 (2602)
+|.++|+ ||+++|+|++|+.|... +.... ..|+.++| .||.+++...|+++.++ ++.++++.+...+..
T Consensus 147 ~i~~la~-~~~~vi~D~a~a~g~~~-~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~ 224 (377)
T 3ju7_A 147 EYEELEK-KGVPVVVDAAPGFGLMN-GGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDTNR 224 (377)
T ss_dssp HHHHHHH-TTCCBEEECTTCTTCEE-TTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCTTS
T ss_pred HHHHHHh-cCCEEEEECCCccCCeE-CCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCCCC
Confidence 9999999 99999999999988642 22122 14565555 56877653357777664 334444443332211
Q ss_pred ---cccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEE--EeCCCC-CCCCceEEEEEecC
Q psy15216 1624 ---EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIY--INGDMN-NRIPHNLNISFNFI 1697 (2602)
Q Consensus 1624 ---~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~--i~~~~~-~~~~~~~~~~~~~~ 1697 (2602)
..++..+..++.+..++ ..+ ..++...++.+++++++.+.|.+ .+++. +..... ...+....+.++..
T Consensus 225 ~~~~~g~~~~~~~~~aa~~~-~~l----~~l~~~~~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (377)
T 3ju7_A 225 ECTMMGFNCKMSEYAAAIGI-ATM----KKWDDKLKERTRISEWYKQLLQS-NGLMKKGWQLQKTEAVIQQFMPILCPEE 298 (377)
T ss_dssp CBCSSCCBCCCCHHHHHHHH-HHH----HTHHHHHHHHHHHHHHHHHHHHH-TTTTTTTCBCCCCSCBCCSSEEEECCTT
T ss_pred ceeeccccCCCCHHHHHHHH-HHH----HHHHHHHHHHHHHHHHHHHHhcC-CCCccccccCCCCCcceEEEEEEEeCCh
Confidence 11222222222222221 112 34677788888899999999987 55431 111111 11222333444432
Q ss_pred -CcHHHHHhc--CCEEEccccccCCCCCChhHH---HHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1698 -EGESLLMAI--KDIAVSSGSACTSASLEPSYV---LRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1698 -~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
+.+++...| +||.++.+... +.+.++.+. ...++.++....+.|||+++..+|.+|+++++++|++
T Consensus 299 ~~~~~l~~~L~~~gI~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~ 370 (377)
T 3ju7_A 299 VRNKQVIEDLKKQKIEARLYFSP-SCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQ 370 (377)
T ss_dssp SCHHHHHHHHHTTTBCCBCTTSS-CGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHCCCceecccCC-ccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHH
Confidence 367777777 79988765411 111122211 1112223334457899999999999999999999986
No 299
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.87 E-value=3.6e-21 Score=246.92 Aligned_cols=300 Identities=15% Similarity=0.105 Sum_probs=222.8
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccC
Q psy15216 1402 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 1481 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~ 1481 (2602)
..+.++.+.+++.+.+.....+|... ..++|+++++++++++++|++|+|+|+|+++++.++.
T Consensus 26 ~~~~~~~v~~a~~~~~~~~~~y~~~~-----------~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~------ 88 (350)
T 3fkd_A 26 TDGDKDHLEKHLVENLNCIRHYPEPD-----------AGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR------ 88 (350)
T ss_dssp CCSCCHHHHHHHHHTGGGGGSCCCTT-----------CHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT------
T ss_pred CCCCCHHHHHHHHHhHhHHhcCCCCc-----------HHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC------
Confidence 34678899999998886555666541 1478999999999988999999999999999988863
Q ss_pred CCEEEEcCCCCcchHHHHHHHHhCCcEEEEecc-CCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhh
Q psy15216 1482 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP-KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS 1560 (2602)
Q Consensus 1482 gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~-~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~ 1560 (2602)
||+|+++.|+|+++...+... |++++.++. ++...+++ +++++|++++|+||||.++|+++|.++++.
T Consensus 89 gd~Vi~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~ 157 (350)
T 3fkd_A 89 GSRSLIAIPSFAEYEDACRMY---EHEVCFYPSNEDIGEADF--------SNMDFCWLCNPNNPDGRLLQRTEILRLLND 157 (350)
T ss_dssp TCEEEEEESCCHHHHHHHHHT---TCEEEEEETTSCGGGSCC--------TTCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHc---CCeEEEEecCCccccCcc--------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHh
Confidence 899999999999987666554 999999998 65444444 689999999999999999999999999987
Q ss_pred cC-CEEEEecccccCccc-----ccCCCCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCCccccCCCCCc
Q psy15216 1561 KG-VIFHCDAAQAVGKID-----INIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 1632 (2602)
Q Consensus 1561 ~g-i~vivD~a~~~g~~~-----~~l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~ 1632 (2602)
++ .++|+|++|+..... ..+...+.++++.|+||.+|++| +||+++++++++.+.... ..+++
T Consensus 158 ~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~---------~~~~~ 228 (350)
T 3fkd_A 158 HPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFS---------TPWAV 228 (350)
T ss_dssp CTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTC---------CTTCS
T ss_pred CCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhC---------CCCCC
Confidence 75 799999998643211 12233455688999999888666 899999876665554332 13456
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc---CCE
Q psy15216 1633 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI---KDI 1709 (2602)
Q Consensus 1633 ~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L---~gI 1709 (2602)
+...+.++..+|+......+...+ ..++++++.+.|.+ .+++.+..+. .....+.++..+..++...| +||
T Consensus 229 ~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~~L~~-~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~~gi 302 (350)
T 3fkd_A 229 NALAIEAAKFILIHPAQFTLPIRK-WQRNTVDFITALNR-LDGVEVHPSG----TTFFLLRLKKGTAAELKKYMLEEYNM 302 (350)
T ss_dssp CHHHHHHHHHHHHCTTTTCCCHHH-HHHHHHHHHHHHHH-STTEEECCCS----SSEEEEEESSSCHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHhCHHHHHHHHHH-HHHHHHHHHHHHhc-CCCcEECCCC----CcEEEEECCCCCHHHHHHHHHHHCCE
Confidence 666666666666632212233333 33888899999987 6888875322 23334555544566676665 699
Q ss_pred EEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1710 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1710 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.+++|..|... ..+++|||++ +.+++++++++|++
T Consensus 303 ~v~~g~~f~~~-----------------~~~~iRis~~---~~~~~~~l~~al~~ 337 (350)
T 3fkd_A 303 LIRDASNFRGL-----------------DESYVRITTQ---RPAQNQLFIKALET 337 (350)
T ss_dssp ECEECTTSTTC-----------------CTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred EEEeCccCCCC-----------------CCCEEEEEcC---CHHHHHHHHHHHHH
Confidence 99999887532 1389999987 88999999999997
No 300
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.87 E-value=7.2e-22 Score=256.27 Aligned_cols=299 Identities=14% Similarity=0.131 Sum_probs=211.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHH-HHHhCCcEEEEecc
Q psy15216 1436 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDGFRVTYLKP 1514 (2602)
Q Consensus 1436 ~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~-~~~~~G~~v~~v~~ 1514 (2602)
.....++|+++++++|.+ +.++++|+|+|++.++. +. ++||+|+++.++|++....+. .++..|+++++++.
T Consensus 54 ~~~~~~lr~~la~~~g~~--~~i~~~sGt~a~~~al~-~~----~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 126 (393)
T 1n8p_A 54 NPNRENLERAVAALENAQ--YGLAFSSGSATTATILQ-SL----PQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTND 126 (393)
T ss_dssp CHHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHH-TS----CSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESS
T ss_pred ChhHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHH-Hc----CCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCC
Confidence 346789999999999976 56666667999999999 65 799999999999998766554 34556999999986
Q ss_pred CCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhc----CCEEEEecccccCcccccCCCCCccEEEE
Q psy15216 1515 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK----GVIFHCDAAQAVGKIDINIQNYKVDLMSF 1590 (2602)
Q Consensus 1515 ~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~----gi~vivD~a~~~g~~~~~l~~~~~D~~v~ 1590 (2602)
+ | ++|+++++++|++|++++|+||||.++|+++|.++|++| |+++|+|++|+.+... +...+++|++++
T Consensus 127 ~-----d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~~~~~di~~~ 199 (393)
T 1n8p_A 127 L-----L-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPLNFGADIVVH 199 (393)
T ss_dssp H-----H-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGGGGTCSEEEE
T ss_pred C-----h-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHHHcCCeEEEE
Confidence 5 7 899999999999999999999999999999999999999 9999999999877643 444567999999
Q ss_pred ccccccCCCc--e-EEEEEe-cCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 1591 SAHKIYGPKG--I-GALYIR-RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLY 1666 (2602)
Q Consensus 1591 S~~K~~gp~G--~-G~l~~~-~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~ 1666 (2602)
|+||++|++| + |+++++ +++++.+.+.... ..++.+....+++..+++. +....++..+.++++.
T Consensus 200 S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~-------~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~ 268 (393)
T 1n8p_A 200 SATKYINGHSDVVLGVLATNNKPLYERLQFLQNA-------IGAIPSPFDAWLTHRGLKT----LHLRVRQAALSANKIA 268 (393)
T ss_dssp ETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH-------HCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHH
T ss_pred ECcccccCCCCceeEEEEeCCHHHHHHHHHHHHh-------cCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHHH
Confidence 9999999888 6 999885 4555555432110 1122333333333334432 3344455566677777
Q ss_pred HHHhhcCCc-EE-EeCCC--C-----------CC-C-CceEEEEEecC--CcHHHHHhc--CCEEEccccccCCCCC--C
Q psy15216 1667 NGLMESIEE-IY-INGDM--N-----------NR-I-PHNLNISFNFI--EGESLLMAI--KDIAVSSGSACTSASL--E 1723 (2602)
Q Consensus 1667 ~~L~~~~~g-l~-i~~~~--~-----------~~-~-~~~~~~~~~~~--~~~~~~~~L--~gI~v~~g~~~~~~~~--~ 1723 (2602)
+.|.+ .+. +. +..+. . .. . +.+..|.+++. +...++..| .++.++.|+.|..... .
T Consensus 269 ~~L~~-~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~ 347 (393)
T 1n8p_A 269 EFLAA-DKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAV 347 (393)
T ss_dssp HHHTS-CTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTT
T ss_pred HHHHh-CCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeecccc
Confidence 77766 444 43 21111 0 01 2 55666666642 344566665 4677777765542100 1
Q ss_pred hhH------HHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1724 PSY------VLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1724 ~~~------~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
+++ .+..+|.+ .+.||+|++.++++++++.+.++|++
T Consensus 348 ~~h~~~~~~~~~~~g~~----~~~iRlS~g~~~~~~~i~~l~~al~~ 390 (393)
T 1n8p_A 348 MTHGGIPKEAREASGVF----DDLVRISVGIEDTDDLLEDIKQALKQ 390 (393)
T ss_dssp TTSCSSCTTTTTTTSCC----TTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred ccccccCHHHHHhcCCC----CCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 111 23445554 38999999999999999999999986
No 301
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.87 E-value=1.3e-21 Score=255.06 Aligned_cols=332 Identities=15% Similarity=0.108 Sum_probs=226.5
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCC
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 1483 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd 1483 (2602)
..++.+.+++.+.+...+.. .. .....++|+.++++++.+ ++++++|+|+|++.++.++. +++||
T Consensus 33 ~~~~~~~~a~~~~~~~~~~~-~~---------~~~~~~l~~~la~~~~~~--~~i~~~~gt~al~~~l~~~~---~~~gd 97 (391)
T 3dr4_A 33 RLDGNERDYVLECMDTTWIS-SV---------GRFIVEFEKAFADYCGVK--HAIACNNGTTALHLALVAMG---IGPGD 97 (391)
T ss_dssp CCCSSHHHHHHHHHHHTCCS-SC---------SHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHT---CCTTC
T ss_pred CCCHHHHHHHHHHHHcCCcc-CC---------ChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcC---CCCcC
Confidence 45577888888888653221 00 134788999999999976 88999999999999999983 38999
Q ss_pred EEEEcCCCCcchHHHHHHHHhCCcEEEEeccC-CCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcC
Q psy15216 1484 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG 1562 (2602)
Q Consensus 1484 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~g 1562 (2602)
+|+++.++|+++...+... |++++.++.+ .++.+|+++|++++++++++|++ +||||.+.|+++|.++|++||
T Consensus 98 ~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~---~n~tG~~~~~~~i~~l~~~~~ 171 (391)
T 3dr4_A 98 EVIVPSLTYIASANSVTYC---GATPVLVDNDPRTFNLDAAKLEALITPRTKAIMP---VHLYGQICDMDPILEVARRHN 171 (391)
T ss_dssp EEEEESSSCTHHHHHHHHT---TCEEEEECBCTTTCSBCGGGSGGGCCTTEEEECC---BCGGGCCCCHHHHHHHHHHTT
T ss_pred EEEECCCchHHHHHHHHHC---CCEEEEEecCccccCcCHHHHHHhcCCCceEEEE---ECCCCChhhHHHHHHHHHHcC
Confidence 9999999999998777655 9999999998 46789999999999999998884 578999999999999999999
Q ss_pred CEEEEecccccCcccccC--CCCCccEEEEc--cccccCCCceEEEEEecC-CCCccccccccCCcc-ccC---CCC-Cc
Q psy15216 1563 VIFHCDAAQAVGKIDINI--QNYKVDLMSFS--AHKIYGPKGIGALYIRRN-PRTRIEAQIHGGGHE-YGL---RSG-TL 1632 (2602)
Q Consensus 1563 i~vivD~a~~~g~~~~~l--~~~~~D~~v~S--~~K~~gp~G~G~l~~~~~-~~~~l~~~~~g~~~~-~~~---~~g-t~ 1632 (2602)
+++|+|++|+.|....+. ..+ .|+.++| .||.+++...|+++.+++ +.+.+.+...++... ..+ ..| ..
T Consensus 172 ~~li~D~a~~~g~~~~~~~~~~~-~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~ 250 (391)
T 3dr4_A 172 LLVIEDAAEAVGATYRGKKSGSL-GDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNY 250 (391)
T ss_dssp CEEEEECTTCTTCEETTEETTSS-SSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBC
T ss_pred CEEEEECcccccceECCeeeccc-CCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCCCCccccccccccc
Confidence 999999999987654332 222 3666666 558665433578777654 434444333222210 000 011 11
Q ss_pred chhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCC--CCC--CCCceEEEEEec---CCcHHHHH
Q psy15216 1633 ATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGD--MNN--RIPHNLNISFNF---IEGESLLM 1704 (2602)
Q Consensus 1633 ~~~~~~al~~aL~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~--~~~--~~~~~~~~~~~~---~~~~~~~~ 1704 (2602)
... .+.+++.+. ...+++..++.+++++++.+.|.+ . ++.+..+ +.. ..+....+.++. .+..++..
T Consensus 251 ~~~---~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 325 (391)
T 3dr4_A 251 RMT---NIQAAIGLAQLERVDEHLAARERVVGWYEQKLAR-L-GNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIK 325 (391)
T ss_dssp BCC---HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGG-G-TTSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHH
T ss_pred CCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-C-CccccCcCCCCCCcceeEEEEEEECCccchhHHHHHH
Confidence 222 222333322 245678888899999999999988 4 6666544 222 222334444542 34667777
Q ss_pred hc--CCEEEccccccCCCCCChhHHH---HHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1705 AI--KDIAVSSGSACTSASLEPSYVL---RALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1705 ~L--~gI~v~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.| +||.++++..... ..+.+.. ..++.......+.+|++++.++|.+||++++++|++
T Consensus 326 ~L~~~GI~v~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~ 388 (391)
T 3dr4_A 326 DLDALGIESRPVFHPMH--IMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQ 388 (391)
T ss_dssp HHHHTTCCCEECCCCGG--GSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred HHHHCCCceeecCCccc--cChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 76 7999987752111 0111110 001111122346899999999999999999999986
No 302
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.87 E-value=3.9e-21 Score=250.52 Aligned_cols=304 Identities=14% Similarity=0.120 Sum_probs=206.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHH-HHhCCcE
Q psy15216 34 IYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFR 112 (2602)
Q Consensus 34 ~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~ 112 (2602)
.++....+..+++++++++++|.+ ++++++|+++|+++++.++. ++||+|+++.+.|+++...+.. ++..|++
T Consensus 55 ~Y~~~~~~~~~~l~~~ia~~~g~~--~~i~~~~g~~ai~~~~~~l~----~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~ 128 (404)
T 1e5e_A 55 IYTRLGNPTVSNLEGKIAFLEKTE--ACVATSSGMGAIAATVLTIL----KAGDHLISDECLYGCTHALFEHALTKFGIQ 128 (404)
T ss_dssp CBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC----CTTCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred cccCCcChHHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHh----CCCCEEEEeCCCchhHHHHHHHHHHHcCCE
Confidence 333333456789999999999985 67778888899999999887 7999999999999998886653 4667999
Q ss_pred EEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHh-cCCEEEEecccccccccccCCCCCccE
Q psy15216 113 VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS-KGVIFHCDAAQAVGKIDINIQNYKVDL 191 (2602)
Q Consensus 113 v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~-~g~~livD~a~a~g~~~~dl~~~~~D~ 191 (2602)
++.++.+ |+++|+++++++|++|++++|+||||.++|+++|+++|++ +|+++|+|++|+.+.....+ .+++|+
T Consensus 129 ~~~v~~~-----d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~-~~~~di 202 (404)
T 1e5e_A 129 VDFINTA-----IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPV-DFGVDV 202 (404)
T ss_dssp EEEECTT-----STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGG-GGTCSE
T ss_pred EEEECCC-----CHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcc-ccCCEE
Confidence 9999865 8899999999999999999999999999999999999999 99999999999977632222 357899
Q ss_pred EEeccccccCCCC---cEEEEEecCCCC-cccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q psy15216 192 MSFSAHKIYGPKG---IGALYIRRNPRT-RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (2602)
Q Consensus 192 ~~~S~~K~~Gp~G---~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~ 267 (2602)
++.|+||++|.+| +|+++++++.++ .+.+...++ ..++.+....+++.++++. .....++...+++
T Consensus 203 ~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~------~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~ 272 (404)
T 1e5e_A 203 VVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDI------TGSVISPHDAWLITRGLST----LNIRMKAESENAM 272 (404)
T ss_dssp EEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCC------CCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHH
T ss_pred EEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhC------CCCCCCHHHHHHHHHhHhH----HHHHHHHHHHHHH
Confidence 9999999777555 499999987766 665543221 0123454555555555542 2334444455666
Q ss_pred HHHHHHhhccCceE-EeCC-------------CCCCCCceEEEEEcccChhHHHHHh--CCeEEcc---c------ccCC
Q psy15216 268 RLYNGLMESIEEIY-INGD-------------MNNRIPHNLNISFNFIEGESLLMAI--KDIAVSS---G------SACT 322 (2602)
Q Consensus 268 ~l~~~L~~~~~g~~-l~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~---g------~~~~ 322 (2602)
.+.+.+.+ .+.+. +.-+ .......++.+.++.. .......+ .+|.+.. | .+|.
T Consensus 273 ~l~~~l~~-~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~ 350 (404)
T 1e5e_A 273 KVAEYLKS-HPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSG-FEGAKKLLDNLKLITLAVSLGGCESLIQHPA 350 (404)
T ss_dssp HHHHHHHT-CTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTH-HHHHHHHHHTCSSSEESSCCCSSSCEEECGG
T ss_pred HHHHHHHh-CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCC-HHHHHHHHHhCCCceeccCCCCcceeeeccc
Confidence 66666655 33332 1111 0001133344444321 12222222 4663332 1 2232
Q ss_pred CCC--CChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 323 SAS--LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 323 ~~~--~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
... ..+...+...|++ +++||||++. ++++++++.|++.
T Consensus 351 ~~~~~~~~~~~~~~~g~~----~~~iRis~g~----e~~~~li~~l~~a 391 (404)
T 1e5e_A 351 SMTHAVVPKEEREAAGIT----DGMIRLSVGI----EDADELIADFKQG 391 (404)
T ss_dssp GTTTTTSCHHHHHHTTCC----TTEEEEECCS----SCHHHHHHHHHHH
T ss_pred ccccccCCHHHHHhcCCC----CCeEEEEeCC----CCHHHHHHHHHHH
Confidence 211 1122333445553 3899999995 7899999998864
No 303
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.87 E-value=1e-21 Score=257.72 Aligned_cols=331 Identities=17% Similarity=0.158 Sum_probs=235.4
Q ss_pred CCCCHHHHHHHHHHHhhcc--CCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhcc
Q psy15216 1403 TPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK 1480 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~--~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~ 1480 (2602)
.+.++.+.+++.+.+...+ ++|++..+........+.+.+|+++++++|++++ .++++++|+|+..++.++. +
T Consensus 33 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~-~i~~~sGt~a~~~a~~~~~----~ 107 (405)
T 2vi8_A 33 NFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHA-NVQPHSGAQANMAVYFTVL----E 107 (405)
T ss_dssp CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE-ECCCSSHHHHHHHHHHHHC----C
T ss_pred ccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce-EEEecCcHHHHHHHHHHhc----C
Confidence 3458899999998885332 3444322222233445566688999999998744 3444555999999999986 7
Q ss_pred CCCEEEEcCCCCcchHHHH---HHHHhCCcEEEEeccC-CCCCcChhHHHhhccC-CceEEEEeccccccccccChHHHH
Q psy15216 1481 RGKHIITVQTEHKSVLDSI---RKLENDGFRVTYLKPK-NNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIG 1555 (2602)
Q Consensus 1481 ~gd~Vlv~~~~~~s~~~~~---~~~~~~G~~v~~v~~~-~~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~~~~l~~I~ 1555 (2602)
+||+|+++++.|+++...+ ... ..+.+++.++.+ .++.+|+++|++++++ +|++|+++ ++| +|...|+++|.
T Consensus 108 ~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~-~~~-~~~~~~l~~i~ 184 (405)
T 2vi8_A 108 HGDTVLGMNLSHGGHLTHGSPVNFS-GVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAA-AAA-YPRIIDFAKFR 184 (405)
T ss_dssp TTCEEEEECGGGTCCTTTTCTTSHH-HHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEEC-CSS-CCSCCCHHHHH
T ss_pred CCCEEEEecccccchhcccchhhhc-cceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEEe-CCC-CCccCCHHHHH
Confidence 9999999999999875321 122 113478888775 4677999999999986 88888874 334 46777899999
Q ss_pred HHhhhcCCEEEEecccccCcccccCCCC---CccEEEEccccccC-CCceEEEEEecCCCCccccccccCCccccCCCCC
Q psy15216 1556 ELCRSKGVIFHCDAAQAVGKIDINIQNY---KVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGT 1631 (2602)
Q Consensus 1556 ~ia~~~gi~vivD~a~~~g~~~~~l~~~---~~D~~v~S~~K~~g-p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt 1631 (2602)
++|++||+++|+|++|+.|..+.+.... .+|++++|+||+++ |.| |++++++++.+.+.+... .+..++
T Consensus 185 ~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~~l~~~~~------~~~~~~ 257 (405)
T 2vi8_A 185 EIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG-GMILCQEQFAKQIDKAIF------PGIQGG 257 (405)
T ss_dssp HHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC-EEEEECHHHHHHHHHHHT------TTTCSS
T ss_pred HHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC-eEEEEcHHHHHHHHhhhc------ccccCC
Confidence 9999999999999999876443332222 57899999999664 888 999999776665554321 123466
Q ss_pred cchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--CCcHHHHHhc--
Q psy15216 1632 LATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESLLMAI-- 1706 (2602)
Q Consensus 1632 ~~~~~~~al~~aL~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~L-- 1706 (2602)
+++.++.++.++++... .++++..+++.++++++.+.|.+ . ++.+..+.. ......+.++. .+...+...|
T Consensus 258 ~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~ 333 (405)
T 2vi8_A 258 PLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQN-E-GFTLVSGGT--DNHLLLVDLRPQQLTGKTAEKVLDE 333 (405)
T ss_dssp CCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEGGGSC--SSSEEEEECGGGTCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCC--CceEEEEEccCCCCCHHHHHHHHHH
Confidence 77888888888888654 57788999999999999999988 4 787765422 13444455542 2455666555
Q ss_pred CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCC----CCCHHHHHHHHHHHHHh
Q psy15216 1707 KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR----FTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1707 ~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~----~~t~edid~li~~L~~~ 1765 (2602)
+||.+++|..+... .+ ....+++|++++. ..+.+|+++++++|++.
T Consensus 334 ~gi~v~~g~~~~~~----------~~---~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 383 (405)
T 2vi8_A 334 VGITVNKNTIPYDP----------ES---PFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLV 383 (405)
T ss_dssp HTEECEEECCTTCS----------SC---TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred cCceeccCcCcccc----------CC---CCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHH
Confidence 79999988643110 00 0112689999986 46799999999999974
No 304
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.86 E-value=2e-21 Score=256.66 Aligned_cols=289 Identities=17% Similarity=0.182 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHhC--------CCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEE
Q psy15216 1439 IEKARNEVAQLIY--------ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVT 1510 (2602)
Q Consensus 1439 ~~~lr~~ia~~~g--------~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~ 1510 (2602)
..++|+.++++++ +++++|++|+|+++++..++.++. ++||+|+++.|+|+++...+. ...|++++
T Consensus 85 ~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~----~~gd~Vl~~~p~y~~~~~~~~--~~~g~~~~ 158 (428)
T 1iay_A 85 LPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLA----DPGDAFLVPSPYYPAFNRDLR--WRTGVQLI 158 (428)
T ss_dssp CHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHC----CTTCEEEEESSCCTTHHHHTT--TTTCCEEE
T ss_pred cHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhC----CCCCeEEEccCCCcchHHHHH--HhcCCEEE
Confidence 4577888888876 678899999999999999999987 799999999999999765331 23599999
Q ss_pred EeccCC--CCCcChhHHHhhccC------CceEEEEeccccccccccC---hHHHHHHhhhcCCEEEEecccccCcc---
Q psy15216 1511 YLKPKN--NGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI--- 1576 (2602)
Q Consensus 1511 ~v~~~~--~~~id~d~l~~~i~~------~t~lv~l~~~~n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~--- 1576 (2602)
.++.+. ++.+|+++|++++++ ++++|++++|+||||.++| +++|.++|++||+++|+|++|+....
T Consensus 159 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~ 238 (428)
T 1iay_A 159 PIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTP 238 (428)
T ss_dssp EECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSS
T ss_pred EeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCC
Confidence 998864 456899999999863 7899999999999999999 99999999999999999999975221
Q ss_pred -ccc---CCC------CCcc--EEEEccccccCCCc--eEEEEE-ecCCCCccccccccCCccccCCCCCcchhHHHHHH
Q psy15216 1577 -DIN---IQN------YKVD--LMSFSAHKIYGPKG--IGALYI-RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMG 1641 (2602)
Q Consensus 1577 -~~~---l~~------~~~D--~~v~S~~K~~gp~G--~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~ 1641 (2602)
..+ +.. +++| +++.|+||.+|++| +|++++ ++++++.+.... ..++.+.+.+.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~ 309 (428)
T 1iay_A 239 QFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMS---------SFGLVSTQTQYFLA 309 (428)
T ss_dssp CCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHH---------TTSCCCHHHHHHHH
T ss_pred CccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHH---------hcccCCHHHHHHHH
Confidence 111 111 1256 88999999888778 699999 454554444321 11345556666666
Q ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecC-------CcHHHHHhc--C-C
Q psy15216 1642 EAFRL---ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-------EGESLLMAI--K-D 1708 (2602)
Q Consensus 1642 ~aL~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~~L--~-g 1708 (2602)
.+++. ....+++..+++.++++++.+.|.+ . ++.+..+. ...+..+.++.. ...++...| + |
T Consensus 310 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 384 (428)
T 1iay_A 310 AMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV-V-GIKCLKNN---AGLFCWMDLRPLLRESTFDSEMSLWRVIINDVK 384 (428)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCBCCCS---SSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSC
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-CCcccCCC---eeEEEEEechhhcCCCchhHHHHHHHHHHHhCC
Confidence 66662 3345678888999999999999987 3 65544221 122333444431 123455555 4 9
Q ss_pred EEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1709 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1709 I~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
|.+++|..|... ..+++||+++ ..+.+++++++++|++.
T Consensus 385 i~v~~~~~~~~~-----------------~~~~iRis~~-~~~~e~i~~~~~~l~~~ 423 (428)
T 1iay_A 385 LNVSPGSSFECQ-----------------EPGWFRVCFA-NMDDGTVDIALARIRRF 423 (428)
T ss_dssp EECEEGGGGTCS-----------------SSSEEEEECS-SSCHHHHHHHHHHHHHH
T ss_pred EEEeCchhhCCC-----------------CCCEEEEEEe-cCCHHHHHHHHHHHHHH
Confidence 999998876532 1278999998 57999999999999873
No 305
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.86 E-value=8.3e-21 Score=254.21 Aligned_cols=324 Identities=15% Similarity=0.084 Sum_probs=223.7
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHhcccccccCC
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g--~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~g 86 (2602)
.|+.++++..+.+....+. ....|........+.+.+.+++.+.+| +++++|++|+|+++|+.+++.++. .++|
T Consensus 107 ~p~~~~~~a~~~l~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~~~g 182 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGR-ATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLI---RNEK 182 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTS-CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHC---CSTT
T ss_pred CCHHHHHHHHHHHHcCCCC-cCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHc---CCCC
Confidence 5666777777766542110 111222222223333444444444444 577899999999999999999985 3589
Q ss_pred CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC--CccChHHHHhhccC------CceEEEEecccCccccccc---H
Q psy15216 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICS------DTILVSVMLVNNEIGVIQP---I 155 (2602)
Q Consensus 87 d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~--~~ld~e~l~~~i~~------~tklv~i~~~~npTG~~~~---l 155 (2602)
|.|+++.|.|+++...+... |++++.++++++ +.+|+++|++++++ ++++|++++|+||||.+++ +
T Consensus 183 d~Vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l 259 (500)
T 3tcm_A 183 DGILVPIPQYPLYSASIALH---GGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQ 259 (500)
T ss_dssp EEEEEEESCCTHHHHHHHHT---TCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHH
T ss_pred CEEEEeCCCcHhHHHHHHHc---CCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHH
Confidence 99999999999988777665 999999988764 58999999999976 7899999999999999998 4
Q ss_pred HHHHHHHHhcCCEEEEecccccccc-----cccCC---------CCCc-cEEEecccccc-CCCC--cEEEEE---ecCC
Q psy15216 156 LEIGELCRSKGVIFHCDAAQAVGKI-----DINIQ---------NYKV-DLMSFSAHKIY-GPKG--IGALYI---RRNP 214 (2602)
Q Consensus 156 ~~I~~la~~~g~~livD~a~a~g~~-----~~dl~---------~~~~-D~~~~S~~K~~-Gp~G--~G~l~~---~~~~ 214 (2602)
++|+++|++||+++|+|++|+.... ..++. ..+. .+++.|+||.+ |++| +||+++ ++++
T Consensus 260 ~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~ 339 (500)
T 3tcm_A 260 YDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPV 339 (500)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTH
T ss_pred HHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHH
Confidence 5566779999999999999875322 11110 1112 36677999966 7777 799988 6666
Q ss_pred CCcccceecCCCccccccccCcchhHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeC
Q psy15216 215 RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR----------LARIEMKEELKRILFLQKRLYNGLMESIEEIYING 284 (2602)
Q Consensus 215 ~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~----------~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~ 284 (2602)
++.+.... ....+++.++..++..+++ ......+...++++++++++.+.|.+ ++|+.+..
T Consensus 340 ~~~l~~~~--------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~~g~~~~~ 410 (500)
T 3tcm_A 340 REQIYKIA--------SVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK-LEGITCNE 410 (500)
T ss_dssp HHHHHHHH--------HTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTEECCC
T ss_pred HHHHHHHH--------hcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEec
Confidence 66654322 1134567777777766664 12344677888899999999999987 68988875
Q ss_pred CCCCCCCceEEEEEc--c----------cChhH-HH-HHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEE
Q psy15216 285 DMNNRIPHNLNISFN--F----------IEGES-LL-MAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRF 348 (2602)
Q Consensus 285 ~~~~~~~~~~~~~~~--~----------~~~~~-~~-~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi 348 (2602)
+... ...++.+. . ...+. ++ ..| +||.+.+|..|... ...+++|+
T Consensus 411 ~~g~---~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~----------------~g~~~iRi 471 (500)
T 3tcm_A 411 AEGA---MYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQV----------------PGTWHFRC 471 (500)
T ss_dssp CCBT---TEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCC----------------TTCCBEEE
T ss_pred CCeE---EEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCC----------------CCCCEEEE
Confidence 5432 12221121 1 11122 22 233 69999999988642 11368999
Q ss_pred ecCCCCCHHHHHHHHHHHHhh
Q psy15216 349 TIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 349 s~~~~~t~edid~li~~L~~~ 369 (2602)
+++ ++++++++++++|++.
T Consensus 472 s~~--~~~e~i~~~i~~l~~~ 490 (500)
T 3tcm_A 472 TIL--PQEDKIPAVISRFTVF 490 (500)
T ss_dssp ESC--SCTTTHHHHHHHHHHH
T ss_pred EEC--CCHHHHHHHHHHHHHH
Confidence 998 7889999999999864
No 306
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.86 E-value=9.7e-21 Score=249.47 Aligned_cols=294 Identities=13% Similarity=0.070 Sum_probs=214.8
Q ss_pred HHHHHHHHHHHHhCCCC---------CcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcE
Q psy15216 1438 AIEKARNEVAQLIYADP---------REIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFR 1508 (2602)
Q Consensus 1438 ~~~~lr~~ia~~~g~~~---------~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~ 1508 (2602)
+.+.+.+.+++.+|.+. ++|++|+|+++|+++++.++. ++||+|++++|+|+++...++. .|++
T Consensus 83 lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~~~---~g~~ 155 (425)
T 2r2n_A 83 LLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII----NPGDNVLLDEPAYSGTLQSLHP---LGCN 155 (425)
T ss_dssp HHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHC----CTTCEEEEESSCCHHHHHHHGG---GTCE
T ss_pred HHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhC----CCCCEEEEeCCCcHHHHHHHHH---cCCE
Confidence 44555555555568753 589999999999999999987 8999999999999997766544 4999
Q ss_pred EEEeccCCCCCcChhHHHhhcc------------CCceEEEE-eccccccccccChH---HHHHHhhhcCCEEEEecccc
Q psy15216 1509 VTYLKPKNNGLITLSQLEEKIC------------SDTILVSV-MLVNNEIGVIQPIL---EIGELCRSKGVIFHCDAAQA 1572 (2602)
Q Consensus 1509 v~~v~~~~~~~id~d~l~~~i~------------~~t~lv~l-~~~~n~tG~~~~l~---~I~~ia~~~gi~vivD~a~~ 1572 (2602)
++.++.+.++ +|+++|+++++ +++++|++ ++++||||.++|.+ +|+++|++||+++|+|++|+
T Consensus 156 ~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~ 234 (425)
T 2r2n_A 156 IINVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYY 234 (425)
T ss_dssp EEEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG
T ss_pred EEEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 9999887654 89999999987 46888866 79999999999955 99999999999999999987
Q ss_pred c----Cccccc---CCCCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHH
Q psy15216 1573 V----GKIDIN---IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEA 1643 (2602)
Q Consensus 1573 ~----g~~~~~---l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~a 1643 (2602)
. |..+.+ +...+.++++.|+||.+| +| +||+++++++++.+..... ...++.+...+.++.++
T Consensus 235 ~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~-------~~~~~~~~~~q~a~~~~ 306 (425)
T 2r2n_A 235 FLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQ-------VSTLHPSTFNQLMISQL 306 (425)
T ss_dssp GGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHH-------TTTCSSCHHHHHHHHHH
T ss_pred cccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHH-------HhcCCCCHHHHHHHHHH
Confidence 3 222222 222345688999999888 67 7999999877666554321 12345667777777777
Q ss_pred HHHH-----HHHHHHHHHHHHHHHHHHHHHHhhcCCcE-EEeCCCCCCCCceEEEEEec-CCcHH-HHHhc--CCEEEcc
Q psy15216 1644 FRLA-----RIEMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHNLNISFNF-IEGES-LLMAI--KDIAVSS 1713 (2602)
Q Consensus 1644 L~~~-----~~~~~~~~~~~~~l~~~l~~~L~~~~~gl-~i~~~~~~~~~~~~~~~~~~-~~~~~-~~~~L--~gI~v~~ 1713 (2602)
|+.. ...+++.+++++++++++.+.|.+.++++ .+..+ .. .....+.++. .+..+ +...| +||.+++
T Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p-~~--g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~p 383 (425)
T 2r2n_A 307 LHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVP-AA--GMFLWIKVKGINDVKELIEEKAVKMGVLMLP 383 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCC-SB--SSEEEEEETTCSCCHHHHHTHHHHTTEECEE
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCC-Cc--eEEEEEEeCCCCCHHHHHHHHHHHCCcEEec
Confidence 7642 24467778888999999999998755665 33322 21 2333444443 23444 34444 8999999
Q ss_pred ccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1714 GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1714 g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
|..|... .....+++||+++. .+.+++++++++|++.
T Consensus 384 g~~f~~~--------------~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~ 420 (425)
T 2r2n_A 384 GNAFYVD--------------SSAPSPYLRASFSS-ASPEQMDVAFQVLAQL 420 (425)
T ss_dssp GGGGSSS--------------TTSCCCEEEEECSS-CCHHHHHHHHHHHHHH
T ss_pred hhhhcCC--------------CCCCCCEEEEEeCC-CCHHHHHHHHHHHHHH
Confidence 9887642 00123789999984 5999999999999874
No 307
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.86 E-value=1.3e-21 Score=212.66 Aligned_cols=124 Identities=43% Similarity=0.631 Sum_probs=120.3
Q ss_pred eeccccccceEEeeccEEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCCCCCcc
Q psy15216 2406 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 2485 (2602)
Q Consensus 2406 ~~d~~~~~~gi~~~~~~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~ 2485 (2602)
+.|++|+|||+++.+|.|.+||+||++||+++++.|+|..|||+.+.|.||||++..+.+|.+||+|.|+|+||.|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCccEEEEEEeecCCcEEEEEEecC-CCCChHHHhc
Q psy15216 2486 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPF-YNMNLDEIKN 2529 (2602)
Q Consensus 2486 ~i~v~f~id~~g~l~V~a~~~~tg~~~~~~i~~~-~~l~~~ei~~ 2529 (2602)
+|+|+|+||.||+|+|+|.++.||++..++|... ++||++||++
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~ 126 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDR 126 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHH
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHH
Confidence 9999999999999999999999999999999987 7899999996
No 308
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.86 E-value=5.2e-21 Score=252.94 Aligned_cols=336 Identities=13% Similarity=0.139 Sum_probs=226.3
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc-----c
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH-----F 81 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~-----~ 81 (2602)
...++.+++++.+.+...+.+++ ...+++|+.+++++|.+ ++++++|+|+|+++++.++.. .
T Consensus 39 ~~~~~~~~~a~~~~~~~~~~~~~-----------~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~al~~l~~~~~~~~ 105 (437)
T 3bb8_A 39 KVIGTKELQLMVEASLDGWLTTG-----------RFNDAFEKKLGEYLGVP--YVLTTTSGSSANLLALTALTSPKLGVR 105 (437)
T ss_dssp CCCCHHHHHHHHHHHHHCCCBSC-----------HHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCGGGGGG
T ss_pred CCCCHHHHHHHHHHHHcCCcCCC-----------hHHHHHHHHHHHHHCCC--cEEEeCCHHHHHHHHHHHhhhcccccc
Confidence 35678899999988865322221 25788999999999986 788999999999999998720 0
Q ss_pred cccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHhhccCCceEEEEecccCcccccccHHHHHH
Q psy15216 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (2602)
Q Consensus 82 ~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~ 160 (2602)
.+++||+|+++.++|+++...+... |++++.+++++ ++.+|+++++++++++|++|+++| ++|...|+++|.+
T Consensus 106 ~~~~gd~Vi~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~ 179 (437)
T 3bb8_A 106 ALKPGDEVITVAAGFPTTVNPTIQN---GLIPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIAH---TLGNLFDLAEVRR 179 (437)
T ss_dssp SCCTTCEEEECSSSCHHHHHHHHHT---TCEEEECCEETTTTEECGGGHHHHCCTTEEEEEEEC---GGGCCCCHHHHHH
T ss_pred cCCCcCEEEECCCCcHHHHHHHHHc---CCEEEEEeccCccCCcCHHHHHHhcCCCCeEEEEeC---CCCChhcHHHHHH
Confidence 0378999999999999998887654 99999999876 688999999999999999999986 4677799999999
Q ss_pred HHHhcCCEEEEecccccccccccCCCCC--ccEEEeccccccCCC-C-cEEEEEecCCCCcccceecCCCc---------
Q psy15216 161 LCRSKGVIFHCDAAQAVGKIDINIQNYK--VDLMSFSAHKIYGPK-G-IGALYIRRNPRTRIEAQIHGGGH--------- 227 (2602)
Q Consensus 161 la~~~g~~livD~a~a~g~~~~dl~~~~--~D~~~~S~~K~~Gp~-G-~G~l~~~~~~~~~l~~~~~g~~~--------- 227 (2602)
+|+++|+++|+|++|+.|..+ +...++ .|++++|++|.++++ | .|+++.+++.+..+.+....++.
T Consensus 180 l~~~~~~~li~D~a~~~g~~~-~~~~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (437)
T 3bb8_A 180 VADKYNLWLIEDCCDALGSTY-DGKMAGTFGDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCD 258 (437)
T ss_dssp HHHHHTCEEEEECTTCTTCEE-TTEETTSSSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC-------
T ss_pred HHHHcCCEEEEECccccCceE-CCeecccccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCcccccccccc
Confidence 999999999999999988765 444444 789888876633322 2 58888875543322111111110
Q ss_pred --------------cccc-cccC----------cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEE
Q psy15216 228 --------------EYGL-RSGT----------LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYI 282 (2602)
Q Consensus 228 --------------~~~~-~~gt----------~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l 282 (2602)
+.++ ..++ .++.+.+++ ++++ .+++..++.+++++++.+.|.+ ++++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l-~~l~----~~~~~~~~~~~~~~~l~~~L~~-~~g~~~ 332 (437)
T 3bb8_A 259 NTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGL-AQLE----RIEEFVEKRKANFKYLKDALQS-CADFIE 332 (437)
T ss_dssp ---------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHH-HHHH----HHHHHHHHHHHHHHHHHHHGGG-GTTTEE
T ss_pred cccccccccccccccccccccccccccCcccCCCHHHHHHHH-HHHH----HHHHHHHHHHHHHHHHHHHhhc-cCCccc
Confidence 0011 1111 222222222 2232 2355666668888999999987 667666
Q ss_pred eCCCC-CC--CCceEEEEEc---ccChhHHHHHh--CCeEEcccccCCCCCCChHHH------HHHcCCCccCCCCeEEE
Q psy15216 283 NGDMN-NR--IPHNLNISFN---FIEGESLLMAI--KDIAVSSGSACTSASLEPSYV------LRALGCNDELAHSSIRF 348 (2602)
Q Consensus 283 ~~~~~-~~--~~~~~~~~~~---~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~------~~~~g~~~~~~~~~iRi 348 (2602)
+.... .. ....+.+.+. +.+..++...| +||.++.+..... +.+|.+. ...++..+....+.||+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl 411 (437)
T 3bb8_A 333 LPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNL-TRQPYFHDVKYRVVGELTNTDRIMNQTFWI 411 (437)
T ss_dssp CCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSG-GGSGGGSSCCCEECSCCHHHHHHHHHEEEE
T ss_pred cCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCccc-ccCchhhccCccccCCCcHHHHHhcCEEEe
Confidence 53211 11 1123444454 34677788777 7999987754110 0112110 00111112223367999
Q ss_pred ecCCCCCHHHHHHHHHHHHhh
Q psy15216 349 TIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 349 s~~~~~t~edid~li~~L~~~ 369 (2602)
+++.++|++||++++++|++.
T Consensus 412 ~~~~~~t~~di~~i~~~l~~~ 432 (437)
T 3bb8_A 412 GIYPGLTHDHLDYVVSKFEEF 432 (437)
T ss_dssp CCSTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999863
No 309
>4eb5_C NIFU protein (NIFU-1); scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_C*
Probab=99.86 E-value=2.2e-22 Score=213.14 Aligned_cols=92 Identities=54% Similarity=0.955 Sum_probs=86.5
Q ss_pred hhhhhhhhhhcCCCCcCcccCCCCcceeeeecCCCCccEEEEEEEEcCCCcEEeeeeeccccchhHhhHHHHHHHHcCCC
Q psy15216 1770 SYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSSLVTEWVKGKT 1849 (2602)
Q Consensus 1770 ~y~~~i~dh~~~p~~~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~~~~~i~~~~~~~~gc~~~~a~~s~~~~~~~g~~ 1849 (2602)
+|+++|+|||+||||+|.+++++ ++++++||+|||.|+|||+|+ +|+|+|++|+++||+++||||||+||+++|||
T Consensus 1 lY~e~Ildh~~nPrn~G~l~~~d---~~~~~~nP~CGD~i~l~lkv~-d~~I~D~~F~g~GCais~ASaS~mtelv~GKt 76 (153)
T 4eb5_C 1 MYSDKVFDHFQNPRNVGKIEDAD---GVGTVGNPVCGDLMTIYIKVK-DNRIEDIKFQTFGCAAAIATSSMATEMAKGKT 76 (153)
T ss_dssp -CCHHHHHHHHSCSSBSCCSSCS---EEEEEECTTTCCEEEEEEEES-SSBEEEEEEEEESCHHHHHHHHHHHHHHTTCB
T ss_pred CcHHHHHHHHhCCCCCCCCCCCC---eEEEeCCCCCCCEEEEEEEec-CCeEEEEEEEEeCcHHHHHHHHHHHHHHcCCC
Confidence 59999999999999999999887 889999999999999999995 78999999999999999999999999999999
Q ss_pred hhhhhcccccchhhhh
Q psy15216 1850 LDEAMSIKNTDIAEEL 1865 (2602)
Q Consensus 1850 ~~~~~~i~~~~i~~~l 1865 (2602)
++||..+++++++..|
T Consensus 77 leEA~~i~~~~i~~~L 92 (153)
T 4eb5_C 77 IEEALKITRDAVAEAL 92 (153)
T ss_dssp HHHHTTCCHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHh
Confidence 9999999988777654
No 310
>2z7e_A ISCU protein, NIFU-like protein; iron-sulfur cluster, iron, biosynthesis, [2Fe-2S], asymmetric trimer, three conserved Cys; 2.30A {Aquifex aeolicus}
Probab=99.86 E-value=1.9e-22 Score=215.89 Aligned_cols=95 Identities=57% Similarity=0.940 Sum_probs=88.7
Q ss_pred hhhhhhHhhhhcccCCCCCCCCCCCCCcceeeeeCCCCcccEEEEEEEEc-CCCceEeeeeeccccchhHhhHHHHHHHH
Q psy15216 371 FFMSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVN-KNGVITDAKFKTYGCGSAIASSSLVTEWV 449 (2602)
Q Consensus 371 ~~~~y~~~~~~hy~~p~n~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~-~~~~i~~~~~~~~gc~~~~a~~s~~~~~~ 449 (2602)
|.++|+++++|||+||||+|.+++++ ++++++||+|||.|+|+|+|| ++|+|+|++|+|+||+++|||||++|+++
T Consensus 1 m~~lY~e~Ildh~~nPrn~G~l~~~d---~~~~~~np~CGD~i~l~lkvd~~~g~I~d~~F~~~GCais~ASaS~mte~v 77 (157)
T 2z7e_A 1 MSFEYNEKVLDHFLNPRNVGVLEDAN---GVGQCGNPACGAAMLFTIKVNPENDVIEDVRFKTFGCGSAIAVSSMLTEMV 77 (157)
T ss_dssp CTTHHHHHHHHHHHSCSSBSCCTTCS---EEEEEEETTTTEEEEEEEEECTTTCBEEEEEEEEESCTTHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHhCCCCCCCCCCCC---eEEEeCCCCCCCEEEEEEEEecCCCeEEEEEEEecCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999887 889999999999999999997 67899999999999999999999999999
Q ss_pred cCCChhhhhhccccchhhh
Q psy15216 450 KGKTLDEAMSIKNTDIAEE 468 (2602)
Q Consensus 450 ~g~~~~e~~~i~~~~i~~~ 468 (2602)
+|||++||..++++++.+.
T Consensus 78 ~Gkt~~EA~~i~~~~i~e~ 96 (157)
T 2z7e_A 78 KGKPIQYALNLTYKDIFEE 96 (157)
T ss_dssp TTSBHHHHHHCCHHHHHHH
T ss_pred cCCcHHHHHHHHhccHHHH
Confidence 9999999999998766554
No 311
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.86 E-value=4.2e-20 Score=246.17 Aligned_cols=325 Identities=14% Similarity=0.116 Sum_probs=231.0
Q ss_pred CHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCC----------cEEEeCCHHHHHHHHHHhhh
Q psy15216 1406 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR----------EIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1406 ~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~----------~iv~t~gaT~al~~al~~l~ 1475 (2602)
+..+.+.+...+.. +. ..|..++...++..++.+++++++|.+.. ..+||+|+|+|+..++.+..
T Consensus 92 ~~~~~~~~~~~~n~---~~--~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar 166 (481)
T 4e1o_A 92 PSLLGDMLADAINC---LG--FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAAR 166 (481)
T ss_dssp HHHHHHHHHHHHCC---CC--SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc---cc--CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHH
Confidence 44455666665532 22 23455677788888999999999998642 57999999999999998876
Q ss_pred hhhc---------------cCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCC------ce
Q psy15216 1476 HFYK---------------KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD------TI 1534 (2602)
Q Consensus 1476 ~~~~---------------~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~------t~ 1534 (2602)
.... .++++|+++..+|+++..++... |++++.+++++++.+|+++|+++|+++ +.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~---g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~ 243 (481)
T 4e1o_A 167 KNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLIS---LVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPV 243 (481)
T ss_dssp HHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHH---TCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhC---CCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcE
Confidence 3211 26789999999999998887765 899999999888999999999999764 67
Q ss_pred EEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCccccc-----CCCC-CccEEEEcccc-ccCCCceEEEEEe
Q psy15216 1535 LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN-----IQNY-KVDLMSFSAHK-IYGPKGIGALYIR 1607 (2602)
Q Consensus 1535 lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~-----l~~~-~~D~~v~S~~K-~~gp~G~G~l~~~ 1607 (2602)
+|++++++|+||.+.|+++|+++|++||+|+|+|+||+.+....+ +... .+|++++++|| +++|.|+|+++++
T Consensus 244 ~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~ 323 (481)
T 4e1o_A 244 FVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVK 323 (481)
T ss_dssp EEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEES
T ss_pred EEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEe
Confidence 899999999999999999999999999999999999987643221 1111 25999999999 6779999999998
Q ss_pred cCCC--Cc--cccccccCCc--------cccCCCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy15216 1608 RNPR--TR--IEAQIHGGGH--------EYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIE 1674 (2602)
Q Consensus 1608 ~~~~--~~--l~~~~~g~~~--------~~~~~~gt~~~~~~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~ 1674 (2602)
++.. .. ..+.+..... ..... ++.. ....++.+++. +...+++++.++..++++++.+.|.+ .+
T Consensus 324 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~-~~r~-~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~ 400 (481)
T 4e1o_A 324 DKYKLQQTFSVNPIYLRHANSGVATDFMHWQIP-LSRR-FRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRN-DP 400 (481)
T ss_dssp BHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSS-SCCC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CT
T ss_pred CHHHHHHHhcCCchhccCcccCCCCCccccccc-CCCC-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 6421 11 1222211110 00111 1222 23345556666 44567899999999999999999987 78
Q ss_pred cEEEeCCCCCCCCceEEEEEecCC--cHHHHHhc--CC-EEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCC-
Q psy15216 1675 EIYINGDMNNRIPHNLNISFNFIE--GESLLMAI--KD-IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR- 1748 (2602)
Q Consensus 1675 gl~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~L--~g-I~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~- 1748 (2602)
++.+..++. ..+..|.++..+ ..++...| +| +.+.++.. . ...++|+++..
T Consensus 401 g~~~~~~~~---~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~-------------------g~~~lR~~~~~~ 457 (481)
T 4e1o_A 401 SFEIPAKRH---LGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATI-Q-------------------DKLIIRFTVTSQ 457 (481)
T ss_dssp TEECCSCCC---SSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEE-T-------------------TEEEEEEECCCT
T ss_pred CeEEecCCc---eeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEE-C-------------------CEEEEEEEeCCC
Confidence 999875432 244555554321 23455555 34 22222111 0 12679999775
Q ss_pred CCCHHHHHHHHHHHHH
Q psy15216 1749 FTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1749 ~~t~edid~li~~L~~ 1764 (2602)
.+|.+||++++++|++
T Consensus 458 ~tt~~di~~~~~~i~~ 473 (481)
T 4e1o_A 458 FTTRDDILRDWNLIRD 473 (481)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4589999999999987
No 312
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.86 E-value=1.7e-21 Score=255.66 Aligned_cols=331 Identities=18% Similarity=0.172 Sum_probs=236.1
Q ss_pred CCCCCCCHHHHHHHHHHHhh--hcCCCCCCCcchhhhHHHHHH-HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 4 SATTPIDPRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIE-KARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 4 a~~~~~p~~v~~a~~~~l~~--~~~~p~~~~~~~~~~~~~~~~-~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
++.++.|+.+.+++.+.+.. ..++|+.. +..+.......+ .+|+++++++|++++++++++| |+|+.+++.++.
T Consensus 30 ~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~-~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sG-t~a~~~~~~~~~- 106 (407)
T 2dkj_A 30 ASENFVSKQVREAVGSVLTNKYAEGYPGAR-YYGGCEVIDRVESLAIERAKALFGAAWANVQPHSG-SQANMAVYMALM- 106 (407)
T ss_dssp TTCCCCCHHHHHHHTSGGGGCCCCEETTEE-SSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHHHHHHHC-
T ss_pred cCCCCCCHHHHHHHHhhhhcCcccCCCccc-ccCCchHHHHHHHHHHHHHHHHhCCCcceEEecch-HHHHHHHHHHhc-
Confidence 44456699999999998864 22344331 111222222333 4678999999997655555554 669999999986
Q ss_pred ccccCCCEEEEcCCCCcccH---HHHHHHHhCCc--EEEEeccCC-CCccChHHHHhhccC-CceEEEEecccCcccccc
Q psy15216 81 FYKKRGKHIITVQTEHKSVL---DSIRKLENDGF--RVTYLKPKN-NGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQ 153 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~---~~~~~~~~~G~--~v~~v~~~~-~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~ 153 (2602)
++||+|+++.++|+++. ..+... |. .++.+++++ ++.+|++++++++++ ++++|++++|+|| ...
T Consensus 107 ---~~gd~Vl~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~ 178 (407)
T 2dkj_A 107 ---EPGDTLMGMDLAAGGHLTHGSRVNFS---GKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RFW 178 (407)
T ss_dssp ---CTTCEEEEECGGGTCCGGGTCTTSHH---HHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCC
T ss_pred ---CCCCEEEEecccccCccchHHHHHhc---CceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CCC
Confidence 79999999999999984 333333 44 555555443 678999999999984 8999999999987 788
Q ss_pred cHHHHHHHHHhcCCEEEEecccccccccccCCC---CCccEEEecccc-ccCCCCcEEEEEe-cCCCCcccceecCCCcc
Q psy15216 154 PILEIGELCRSKGVIFHCDAAQAVGKIDINIQN---YKVDLMSFSAHK-IYGPKGIGALYIR-RNPRTRIEAQIHGGGHE 228 (2602)
Q Consensus 154 ~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~---~~~D~~~~S~~K-~~Gp~G~G~l~~~-~~~~~~l~~~~~g~~~~ 228 (2602)
|+++|.++|++||+++|+|++|+.|..+.+... ..+|++++|+|| +.|++| |+++++ +++++.+.+....
T Consensus 179 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~~---- 253 (407)
T 2dkj_A 179 DFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLIFP---- 253 (407)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHTT----
T ss_pred CHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhhcc----
Confidence 999999999999999999999987543322111 137999999999 557886 999998 6777666554322
Q ss_pred ccccccCcchhHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--cChhH
Q psy15216 229 YGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGES 305 (2602)
Q Consensus 229 ~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~--~~~~~ 305 (2602)
+..++++...+.++.++++.. ..++++..++..++++++.+.|.+ . ++.+..++. ...++.+.++. .+...
T Consensus 254 --~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~--~~~~~~~~~~~~~~~~~~ 327 (407)
T 2dkj_A 254 --GIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELAR-R-GYRIVTGGT--DNHLFLVDLRPKGLTGKE 327 (407)
T ss_dssp --TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEGGGSC--SSSEEEEECGGGTCCHHH
T ss_pred --cccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh-C-CceeecCCC--CceEEEEECcccCCCHHH
Confidence 234567777777777888864 356789999999999999999988 4 788775322 23455566653 35666
Q ss_pred HHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCC----CCHHHHHHHHHHHHhh
Q psy15216 306 LLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 306 ~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~----~t~edid~li~~L~~~ 369 (2602)
+...| +||.++++..+... .+ ...++++|++++.+ .+++|+++++++|++.
T Consensus 328 ~~~~l~~~gi~v~~~~~~~~~----------~~---~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 384 (407)
T 2dkj_A 328 AEERLDAVGITVNKNAIPFDP----------KP---PRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRA 384 (407)
T ss_dssp HHHHHHHTTEECEECCCTTCS----------SC---TTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHcCceecCCcCcccc----------cc---ccCCCceeeecccccccCCCHHHHHHHHHHHHHH
Confidence 76666 79999987643110 00 01137899999653 6899999999999974
No 313
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.86 E-value=8.2e-22 Score=259.75 Aligned_cols=276 Identities=16% Similarity=0.120 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEecc--
Q psy15216 1437 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP-- 1514 (2602)
Q Consensus 1437 ~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~-- 1514 (2602)
....++++++++ +|++ +++++|+|+|+|+..+++++. ++||+|+++.++|+++...+... |+++++++.
T Consensus 57 ~~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~----~~gd~Vlv~~~~h~s~~~~~~~~---G~~~~~v~~~~ 127 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFS----QKKGDILMARNVHKSVLHALDIS---QQEGHFIETHQ 127 (446)
T ss_dssp SHHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTT----TSSSCEEECTTCCHHHHHHHHHH---TCCEEECEEEE
T ss_pred hHHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhc----CCCCEEEEecCccHHHHHHHHHc---CCeEEEEeCee
Confidence 356889999999 9986 679999999999999999987 89999999999999999888776 899999988
Q ss_pred CCC----CCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcc-----cccCCCCCc
Q psy15216 1515 KNN----GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI-----DINIQNYKV 1585 (2602)
Q Consensus 1515 ~~~----~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~-----~~~l~~~~~ 1585 (2602)
+++ +.+|+++| +++++++|++++ .|++|.+.|+++|.++|++||+++|+|++|+. +. +.+....++
T Consensus 128 ~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~~~~~~~~g~ 202 (446)
T 2x3l_A 128 SPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGFPDSTLNYQA 202 (446)
T ss_dssp CTTTSSEEEEEC----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTSCCCGGGGTC
T ss_pred ccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCCCCChHHcCC
Confidence 554 56788888 678899999999 56699999999999999999999999999986 22 344445578
Q ss_pred cEEEEcccc-ccCCCceEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q psy15216 1586 DLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIE-MKEELKRILFLQK 1663 (2602)
Q Consensus 1586 D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~-~~~~~~~~~~l~~ 1663 (2602)
|++++|+|| ++|+.|+|+++++++.++ +.++..++ ..+..+++++..++++.++++++... .++..++..++++
T Consensus 203 Di~~~S~~K~l~~~~g~g~l~~~~~~i~-~~~~~~~~---~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~ 278 (446)
T 2x3l_A 203 DYVVQSFHKTLPALTMGSVLYIHKNAPY-RENIIEYL---SYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIE 278 (446)
T ss_dssp SEEEECHHHHSSSCTTCEEEEEETTCTT-HHHHHHHH---HHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CEEEECCccccccccccEEEEEcCCcCC-HHHHHHHH---HHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999 788889999999988765 33322111 23456788888888888888765542 3446777777777
Q ss_pred HHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEc-cccccCCCCCChhHHHHHcCCCccccCC
Q psy15216 1664 RLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVS-SGSACTSASLEPSYVLRALGCNDELAHS 1740 (2602)
Q Consensus 1664 ~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 1740 (2602)
++++. ++.+..+.+ +....+.+++.+..++...| +||.++ +|. +
T Consensus 279 ~l~~~------g~~~~~~~~---~~~l~i~~~~~~~~~l~~~L~~~GI~v~~~g~------------------------~ 325 (446)
T 2x3l_A 279 CLENK------GFEMLQVDD---PLKLLIKYEGFTGHDIQNWFMNAHIYLELADD------------------------Y 325 (446)
T ss_dssp HHHHH------TCEEEECSS---TTEEEEECTTSCHHHHHHHHHHTTEEESEECS------------------------S
T ss_pred HHHHc------CCEECcCCC---CeEEEEEeCCcCHHHHHHHHHHCCCEEEecCC------------------------C
Confidence 77665 455554322 22344444445566676666 799886 221 5
Q ss_pred eEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1741 SIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1741 ~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
++|++++.++|.+++ +++++|++
T Consensus 326 ~iRi~~~~~~t~e~i-~l~~aL~~ 348 (446)
T 2x3l_A 326 QALAILPLWHHDDTY-LFDSLLRK 348 (446)
T ss_dssp CEEEECCCCCTTCCC-CHHHHHHH
T ss_pred EEEEEeecCCCHHHH-HHHHHHHH
Confidence 799999999999999 99999997
No 314
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.86 E-value=5.2e-21 Score=253.11 Aligned_cols=289 Identities=18% Similarity=0.223 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHhC--------CCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEE
Q psy15216 1439 IEKARNEVAQLIY--------ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVT 1510 (2602)
Q Consensus 1439 ~~~lr~~ia~~~g--------~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~ 1510 (2602)
..++|++++++++ +++++|++|+|+++|+..++.++. ++||+|+++.+.|+++...+.. ..|++++
T Consensus 88 ~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~----~~gd~vl~~~p~~~~~~~~~~~--~~g~~~~ 161 (435)
T 3piu_A 88 LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLA----DPGEAVLIPTPYYPGFDRDLKW--RTGVEIV 161 (435)
T ss_dssp CHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHC----CTTCEEEEEESCCTTHHHHTTT--TTCCEEE
T ss_pred cHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhc----CCCCeEEECCCccccHHHHHHH--hcCCEEE
Confidence 4678889998887 678899999999999999999987 8999999999999998765431 3499999
Q ss_pred EeccCC--CCCcChhHHHhhccC------CceEEEEeccccccccccCh---HHHHHHhhhcCCEEEEecccccCcc---
Q psy15216 1511 YLKPKN--NGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPI---LEIGELCRSKGVIFHCDAAQAVGKI--- 1576 (2602)
Q Consensus 1511 ~v~~~~--~~~id~d~l~~~i~~------~t~lv~l~~~~n~tG~~~~l---~~I~~ia~~~gi~vivD~a~~~g~~--- 1576 (2602)
.++.++ ++.+|+++|++++++ ++++|++++|+||||.++|. ++|.++|++||+++|+|++|+.+..
T Consensus 162 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~ 241 (435)
T 3piu_A 162 PIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP 241 (435)
T ss_dssp EEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSS
T ss_pred EeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Confidence 999875 355899999999975 89999999999999999984 7888889999999999999975321
Q ss_pred -cccCC----C---------CCccEEEEccccccCCCc--eEEEEEec-CCCCccccccccCCccccCCCCCcchhHHHH
Q psy15216 1577 -DINIQ----N---------YKVDLMSFSAHKIYGPKG--IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVG 1639 (2602)
Q Consensus 1577 -~~~l~----~---------~~~D~~v~S~~K~~gp~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~a 1639 (2602)
..++. + .+..+++.|+||.+|++| +|++++++ .+.+.+.... ..++.+.....+
T Consensus 242 ~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 312 (435)
T 3piu_A 242 SFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS---------SFGLVSSQTQHL 312 (435)
T ss_dssp CCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHG---------GGSCCCHHHHHH
T ss_pred CCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHh---------hcCCCCHHHHHH
Confidence 11111 1 122388899999888777 79999954 3333332211 112344555555
Q ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecC-------CcHHHHHhc--C
Q psy15216 1640 MGEAFR---LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-------EGESLLMAI--K 1707 (2602)
Q Consensus 1640 l~~aL~---~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~~L--~ 1707 (2602)
+.+++. +....+++.++++.++++++.+.|.+ .++.+..+.. ..+..+.++.. +..++...| +
T Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~---g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 387 (435)
T 3piu_A 313 LSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK--SGISCLNGNA---GLFCWVDMRHLLRSNTFEAEMELWKKIVYE 387 (435)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TTCEECCCCS---SSEEEEECGGGSSSSSHHHHHHHHHHHHHT
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccCCCe---eEEEEEEcccccccCCchhHHHHHHHHHHH
Confidence 556665 22445677888899999999999987 3777654322 12333444321 223555555 4
Q ss_pred -CEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1708 -DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1708 -gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
||.+++|..|... ..+++||+++.. |.+++++++++|++.
T Consensus 388 ~gi~v~~g~~~~~~-----------------~~~~iRi~~~~~-~~e~i~~~l~~l~~~ 428 (435)
T 3piu_A 388 VHLNISPGSSCHCT-----------------EPGWFRVCFANL-PERTLDLAMQRLKAF 428 (435)
T ss_dssp SCEECEEGGGGTCS-----------------STTEEEEECSSS-CHHHHHHHHHHHHHH
T ss_pred CCEEEeCCcccCCC-----------------CCCEEEEEeeCC-CHHHHHHHHHHHHHH
Confidence 9999999887542 137999999765 999999999999873
No 315
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.86 E-value=7.7e-21 Score=248.33 Aligned_cols=328 Identities=16% Similarity=0.119 Sum_probs=226.2
Q ss_pred CHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEE
Q psy15216 1406 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHI 1485 (2602)
Q Consensus 1406 ~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~V 1485 (2602)
++.+.+++.+.++... |..+ ....++|+.+++++|.+ ++++++|+|+|+..++.++. +++||+|
T Consensus 43 ~~~v~~a~~~~~~~~~-------y~~~----~~~~~l~~~la~~~~~~--~~v~~~~Gt~a~~~~l~~~~---~~~gd~v 106 (399)
T 2oga_A 43 RAETDAAIARVLDSGR-------YLLG----PELEGFEAEFAAYCETD--HAVGVNSGMDALQLALRGLG---IGPGDEV 106 (399)
T ss_dssp HHHHHHHHHHHHHHTC-------CSSS----HHHHHHHHHHHHHTTSS--EEEEESCHHHHHHHHHHHTT---CCTTCEE
T ss_pred CHHHHHHHHHHHhcCC-------CCCc----hhHHHHHHHHHHHHCCC--eEEEecCHHHHHHHHHHHhC---CCCcCEE
Confidence 4788888888876421 1111 34678999999999975 68889999999999999982 2799999
Q ss_pred EEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCE
Q psy15216 1486 ITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVI 1564 (2602)
Q Consensus 1486 lv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~ 1564 (2602)
+++.++|+++...+.. .|++++.++.++ ++.+|+++|++++++++++|+ ++||||.+.|+++|.++|++||++
T Consensus 107 l~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~ 180 (399)
T 2oga_A 107 IVPSHTYIASWLAVSA---TGATPVPVEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELADRHGLH 180 (399)
T ss_dssp EEESSSCTHHHHHHHH---TTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCE
T ss_pred EECCCccHHHHHHHHH---CCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHHHHcCCE
Confidence 9999999997766554 499999999886 578999999999999998877 467899999999999999999999
Q ss_pred EEEecccccCcccccCCCCC--ccEEEEccc--cccCCCc-eEEEEEe-cCCCCccccccccCCccccCCC---C---Cc
Q psy15216 1565 FHCDAAQAVGKIDINIQNYK--VDLMSFSAH--KIYGPKG-IGALYIR-RNPRTRIEAQIHGGGHEYGLRS---G---TL 1632 (2602)
Q Consensus 1565 vivD~a~~~g~~~~~l~~~~--~D~~v~S~~--K~~gp~G-~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~---g---t~ 1632 (2602)
+|+|++|+.|... +...++ .|++++|+| |++|++| +|+++.+ +++++.+.+....+.. ..+.. | +.
T Consensus 181 li~Dea~~~g~~~-~~~~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~-~~~~~~~~g~~~~~ 258 (399)
T 2oga_A 181 IVEDAAQAHGARY-RGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSR-QKYSHETKGTNSRL 258 (399)
T ss_dssp ECEECTTCTTCEE-TTEETTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCS-STTCCCSCCCBCCC
T ss_pred EEEECcccccCcc-CCeecccccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCcc-ccccccccccCCCc
Confidence 9999999887532 332233 699999995 9888755 6888876 5555555543322211 11111 1 33
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEE
Q psy15216 1633 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIA 1710 (2602)
Q Consensus 1633 ~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~ 1710 (2602)
+....+++.++++. ++...++..++++++.+.|.+ ++++.+...+....+....+.+...+..++...| +||.
T Consensus 259 ~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~ 333 (399)
T 2oga_A 259 DEMQAAVLRIRLAH----LDSWNGRRSALAAEYLSGLAG-LPGIGLPVTAPDTDPVWHLFTVRTERRDELRSHLDARGID 333 (399)
T ss_dssp CHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHTTT-CTTCBCCCCCTTEECCCSSEEEECSSHHHHHHHHHHTTBC
T ss_pred CHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhcc-CCCccccCCCCCCcceeEEEEEECCCHHHHHHHHHHCCCc
Confidence 44444444445543 345566777888999999987 6777654333221222122334334566676666 7998
Q ss_pred EccccccCCCCCChhHHHHHcCCCcc-------ccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1711 VSSGSACTSASLEPSYVLRALGCNDE-------LAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1711 v~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
++++.. .+.+..+ ....++.... ...+++||+++.++|.+|+++++++|++.
T Consensus 334 v~~~~~-~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 392 (399)
T 2oga_A 334 TLTHYP-VPVHLSP--AYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREW 392 (399)
T ss_dssp CBCSCS-SCGGGSH--HHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred eecCCC-Cccccch--hhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 876431 1110001 1122222110 01268999999999999999999999973
No 316
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.86 E-value=2.3e-20 Score=247.77 Aligned_cols=324 Identities=14% Similarity=0.115 Sum_probs=228.7
Q ss_pred HHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCC---------cEEEeCCHHHHHHHHHHhhhhh
Q psy15216 1407 PRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR---------EIIWTSGATESNNLAIKGAAHF 1477 (2602)
Q Consensus 1407 ~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~---------~iv~t~gaT~al~~al~~l~~~ 1477 (2602)
..+.+.+...+. +....|..++...++.+++.+++++++|.+.+ ..+||+|+|+|+..++.+....
T Consensus 88 ~~~~~~l~~~~n-----~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~ 162 (475)
T 3k40_A 88 AIVADMLSGAIA-----CIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAK 162 (475)
T ss_dssp HHHHHHHHHHHC-----CCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-----ccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHH
Confidence 344455555442 22223455677778888999999999998643 5899999999999998887532
Q ss_pred hc---------------cCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCC------ceEE
Q psy15216 1478 YK---------------KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD------TILV 1536 (2602)
Q Consensus 1478 ~~---------------~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~------t~lv 1536 (2602)
.. .++++|+++..+|+++..++... |++++.+++++++ +|+++|+++|+++ +.+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~---g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v 238 (475)
T 3k40_A 163 KLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLG---GVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYA 238 (475)
T ss_dssp HHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHH---TCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHc---CCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEE
Confidence 11 24578999999999998888776 9999999999889 9999999999764 6789
Q ss_pred EEeccccccccccChHHHHHHhhhcCCEEEEecccccCccccc-----CCCC-CccEEEEcccc-ccCCCceEEEEEecC
Q psy15216 1537 SVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN-----IQNY-KVDLMSFSAHK-IYGPKGIGALYIRRN 1609 (2602)
Q Consensus 1537 ~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~-----l~~~-~~D~~v~S~~K-~~gp~G~G~l~~~~~ 1609 (2602)
++++++|+||.+.|+++|+++|++||+|+|+|+||+.+....+ +... .+|++++++|| +++|.|+|+++++++
T Consensus 239 ~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~ 318 (475)
T 3k40_A 239 VVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDP 318 (475)
T ss_dssp EEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSG
T ss_pred EEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCH
Confidence 9999999999999999999999999999999999987653221 1111 36999999999 678999999999865
Q ss_pred C-CC-cc--ccccccCCc--------cccCCCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcE
Q psy15216 1610 P-RT-RI--EAQIHGGGH--------EYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEI 1676 (2602)
Q Consensus 1610 ~-~~-~l--~~~~~g~~~--------~~~~~~gt~~~~~~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl 1676 (2602)
. +. .+ .+.+..... ..... ++.+ ....++..++. +...+++++.++..++++++.+.|.+ .+++
T Consensus 319 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~-~sr~-~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~ 395 (475)
T 3k40_A 319 SWVVNAFNVDPLYLKHDMQGSAPDYRHWQIP-LGRR-FRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVA-DSRF 395 (475)
T ss_dssp GGC---------------------------C-CCGG-GTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-STTE
T ss_pred HHHHHHhcCCccccCCCcCCCCCCccccccc-CCCc-ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCE
Confidence 2 21 11 111111100 01111 1222 23455666776 44567899999999999999999988 7899
Q ss_pred EEeCCCCCCCCceEEEEEecC--CcHHHHHhc--CCE-EEccccccCCCCCChhHHHHHcCCCccccCCeEEEecC-CCC
Q psy15216 1677 YINGDMNNRIPHNLNISFNFI--EGESLLMAI--KDI-AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFT 1750 (2602)
Q Consensus 1677 ~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~L--~gI-~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~-~~~ 1750 (2602)
++..++. ..++.|.++.. ...++...| +|+ .+.++... ...++|+++. +.+
T Consensus 396 ~l~~~~~---~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--------------------g~~~lR~~~~~~~t 452 (475)
T 3k40_A 396 ELAAEIN---MGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIK--------------------DVYFLRMAICSRFT 452 (475)
T ss_dssp EESSCCB---TTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEET--------------------TEEEEEEECCCTTC
T ss_pred EEecCCc---eEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEEC--------------------CEEEEEEEeCCCCC
Confidence 9986542 34555665432 134455555 232 22222111 1268999976 456
Q ss_pred CHHHHHHHHHHHHHh
Q psy15216 1751 TEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1751 t~edid~li~~L~~~ 1765 (2602)
|.+||++++++|++.
T Consensus 453 t~~di~~~~~~i~~~ 467 (475)
T 3k40_A 453 QSEDMEYSWKEVSAA 467 (475)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999973
No 317
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.86 E-value=6.6e-22 Score=254.86 Aligned_cols=331 Identities=15% Similarity=0.126 Sum_probs=224.2
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHH-HHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEV-AQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~l-A~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~g 86 (2602)
++++.+++++.+.+.+.+..+ ++ +..+++++++ |+++|. ..++++++|+|+|+++++.++. +++|
T Consensus 13 ~~~~~i~~a~~~~~~~~~~~~------~~----~~~~~l~~~~~a~~~g~-~~~~v~~~sgt~al~~al~~l~---~~~G 78 (377)
T 3ju7_A 13 VPVIEYLDELKEIDASHIYTN------YG----PINQRFEQTIMSGFFQN-RGAVTTVANATLGLMAAIQLKK---RKKG 78 (377)
T ss_dssp CCGGGGHHHHHHHHHHTCCSS------SC----HHHHHHHHHHHHHTSTT-CSEEEEESCHHHHHHHHHHHHS---CTTC
T ss_pred CCcHHHHHHHHHHHHcCCccc------CC----HHHHHHHHHHHHHHhCC-CCeEEEeCCHHHHHHHHHHHcC---CCCc
Confidence 566788999999887633221 11 2467899999 999993 4579999999999999999983 3899
Q ss_pred CEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHhhc-cCC--ceEEEEecccCcccccccHHHHHHHH
Q psy15216 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKI-CSD--TILVSVMLVNNEIGVIQPILEIGELC 162 (2602)
Q Consensus 87 d~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~~i-~~~--tklv~i~~~~npTG~~~~l~~I~~la 162 (2602)
|+|+++.++|+++..++... |++++++++++ ++.+|++++++++ +++ |++|+ ++||+|.+.|+++|.++|
T Consensus 79 d~Vi~~~~~~~~~~~~~~~~---G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la 152 (377)
T 3ju7_A 79 KYALMPSFTFPATPLAAIWC---GLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELE 152 (377)
T ss_dssp CEEEEESSSCTHHHHHHHHT---TCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHc---CCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHH
Confidence 99999999999988777655 99999999884 6789999999998 667 99887 566799999999999999
Q ss_pred HhcCCEEEEecccccccccccCCCC---CccEEEec--cccccCCCCcEEEEEec-CCCCcccceecCCCc------ccc
Q psy15216 163 RSKGVIFHCDAAQAVGKIDINIQNY---KVDLMSFS--AHKIYGPKGIGALYIRR-NPRTRIEAQIHGGGH------EYG 230 (2602)
Q Consensus 163 ~~~g~~livD~a~a~g~~~~dl~~~---~~D~~~~S--~~K~~Gp~G~G~l~~~~-~~~~~l~~~~~g~~~------~~~ 230 (2602)
+ ||+++|+|++|++|... +.... ..|+.++| .||.+++...|+++.++ ++.++++++...+.. ..+
T Consensus 153 ~-~~~~vi~D~a~a~g~~~-~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g 230 (377)
T 3ju7_A 153 K-KGVPVVVDAAPGFGLMN-GGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMG 230 (377)
T ss_dssp H-TTCCBEEECTTCTTCEE-TTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSC
T ss_pred h-cCCEEEEECCCccCCeE-CCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCCCCceeecc
Confidence 9 99999999999988642 22222 13555555 57977753356776653 344555544332211 111
Q ss_pred ccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceE--EeCCCCC-CCCceEEEEEcc-cChhHH
Q psy15216 231 LRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIY--INGDMNN-RIPHNLNISFNF-IEGESL 306 (2602)
Q Consensus 231 ~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~--l~~~~~~-~~~~~~~~~~~~-~~~~~~ 306 (2602)
+..+..++.+.+++ .. .+.++...++.+++++++.+.|.+ .+++. +...... ..+..+.+.++. .+.+++
T Consensus 231 ~~~~~~~~~aa~~~-~~----l~~l~~~~~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 304 (377)
T 3ju7_A 231 FNCKMSEYAAAIGI-AT----MKKWDDKLKERTRISEWYKQLLQS-NGLMKKGWQLQKTEAVIQQFMPILCPEEVRNKQV 304 (377)
T ss_dssp CBCCCCHHHHHHHH-HH----HHTHHHHHHHHHHHHHHHHHHHHH-TTTTTTTCBCCCCSCBCCSSEEEECCTTSCHHHH
T ss_pred ccCCCCHHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHHHhcC-CCCccccccCCCCCcceEEEEEEEeCChhhHHHH
Confidence 12222222222221 12 245677888888999999999977 55432 1111111 122233444443 237788
Q ss_pred HHHh--CCeEEcccc--cCCCCCCChHHH---HHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 307 LMAI--KDIAVSSGS--ACTSASLEPSYV---LRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 307 ~~~L--~gI~v~~g~--~~~~~~~~~~~~---~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
...| +||.++.+. .|. .++.+. ...++..++...+.||++++..+|++|++++++.|++.
T Consensus 305 ~~~L~~~gI~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~ 371 (377)
T 3ju7_A 305 IEDLKKQKIEARLYFSPSCH---QQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQK 371 (377)
T ss_dssp HHHHHTTTBCCBCTTSSCGG---GSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-
T ss_pred HHHHHHCCCceecccCCccc---cchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 8888 799887664 222 222221 11122333344578999999999999999999999863
No 318
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.86 E-value=6.3e-21 Score=248.98 Aligned_cols=330 Identities=15% Similarity=0.076 Sum_probs=228.5
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCE
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 1484 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~ 1484 (2602)
.++.+++++.+.++..+..+ .....++|+.+++++|.+ ++++++|+|+|+++++.++. +++||+
T Consensus 18 ~~~~~~~a~~~~~~~~~~~~-----------~~~~~~l~~~la~~~~~~--~~~~~~~gt~al~~~~~~~~---~~~gd~ 81 (393)
T 1mdo_A 18 MGAEELAAVKTVLDSGWITT-----------GPKNQELEAAFCRLTGNQ--YAVAVSSATAGMHIALMALG---IGEGDE 81 (393)
T ss_dssp CCHHHHHHHHHHHHHTCCSS-----------SHHHHHHHHHHHHHHCCS--EEEEESCHHHHHHHHHHHTT---CCTTCE
T ss_pred CCHHHHHHHHHHHhcCCcCC-----------ChHHHHHHHHHHHHhCCC--cEEEecChHHHHHHHHHHcC---CCCCCE
Confidence 45778899988887632211 134678999999999975 79999999999999999982 279999
Q ss_pred EEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC-CCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCC
Q psy15216 1485 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGV 1563 (2602)
Q Consensus 1485 Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi 1563 (2602)
|++++++|+++...+... |++++.++.+++ +.+|++++++++++++++|++++ |||.+.|+++|.++|++||+
T Consensus 82 Vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~~ 155 (393)
T 1mdo_A 82 VITPSMTWVSTLNMIVLL---GANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVH---YAGAPADLDAIYALGERYGI 155 (393)
T ss_dssp EEEESSSCHHHHHHHHHT---TCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBC---GGGCCCCHHHHHHHHHHHTC
T ss_pred EEeCCCccHhHHHHHHHC---CCEEEEEeccCCcCCCCHHHHHHhcCCCceEEEEeC---CCCCcCCHHHHHHHHHHcCC
Confidence 999999999987766544 999999998864 67999999999999999988865 69999999999999999999
Q ss_pred EEEEecccccCcccccCCCCC-ccEEEEccc--cccCCCceEEEEEe-cCCCCccccccccCCc-----------cccC-
Q psy15216 1564 IFHCDAAQAVGKIDINIQNYK-VDLMSFSAH--KIYGPKGIGALYIR-RNPRTRIEAQIHGGGH-----------EYGL- 1627 (2602)
Q Consensus 1564 ~vivD~a~~~g~~~~~l~~~~-~D~~v~S~~--K~~gp~G~G~l~~~-~~~~~~l~~~~~g~~~-----------~~~~- 1627 (2602)
++|+|++|+.|... +...++ .|++++|+| |++++..+|+++.+ +++++.+.+....+.. +..+
T Consensus 156 ~li~D~a~~~g~~~-~~~~~~~~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (393)
T 1mdo_A 156 PVIEDAAHATGTSY-KGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAE 234 (393)
T ss_dssp CBCEECTTCTTCEE-TTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCE
T ss_pred eEEEECccccCCeE-CCeecCCCCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhccccccccc
Confidence 99999999987543 222344 899999999 75554336888886 5555555443222211 0111
Q ss_pred --CCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCC---CCCCceEEEEEe----cC
Q psy15216 1628 --RSGT-LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---NRIPHNLNISFN----FI 1697 (2602)
Q Consensus 1628 --~~gt-~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~---~~~~~~~~~~~~----~~ 1697 (2602)
..|+ .....+.+. .++... ..+++..++.+++++++.+.|.+ .+ +.+...+. ...+....+.++ +.
T Consensus 235 ~~~~g~~~~~~~~~~a-~~~~~l-~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 310 (393)
T 1mdo_A 235 VLAPGYKYNLPDLNAA-IALAQL-QKLDALNARRAAIAAQYHQAMAD-LP-FQPLSLPSWEHIHAWHLFIIRVDEARCGI 310 (393)
T ss_dssp ESSCCCBCCCCHHHHH-HHHHHH-HTHHHHHHHHHHHHHHHHHHHHT-SS-CEECCCCSSCEECCCSCEEEECCHHHHSS
T ss_pred ccccCccCCCCHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHhc-CC-cccccCCCCCCCceeEEEEEEeccccccc
Confidence 1222 111222211 222222 34567777888899999999987 44 66653321 112334455555 34
Q ss_pred CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHc---CCC--ccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1698 EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRAL---GCN--DELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1698 ~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~---~~~--~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
+..++...| +||.++++..|... .+.+.. .+ ... .....+.+|++++.++|.+|+++++++|++
T Consensus 311 ~~~~l~~~l~~~gi~v~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 381 (393)
T 1mdo_A 311 TRDALMASLKTKGIGTGLHFRAAHT--QKYYRE-RFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQ 381 (393)
T ss_dssp CHHHHHHHHHHTTBCCBCCCCCGGG--SHHHHH-HSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCcccccCcccc--Chhhhc-cCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 566777666 89999887765321 111111 00 000 001236899999999999999999999996
No 319
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.86 E-value=6.6e-21 Score=253.32 Aligned_cols=322 Identities=16% Similarity=0.104 Sum_probs=228.5
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHh----CCCCCcEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YADPREIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g~~~~~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
.+.++.+.+++.+.++....++....|. ......++|+++++++ ++++++|++|+|+++++..+ .++.
T Consensus 81 ~~~~~~v~~a~~~~~~~~~~~~~~~~y~----~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~-~~l~--- 152 (449)
T 3qgu_A 81 EPLPKYIADAMAKAAAGLATREGYSGYG----AEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI-QMMF--- 152 (449)
T ss_dssp CCCCHHHHHHHHHHHHGGGGSCCCCCST----TTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHHH---
T ss_pred CCCCHHHHHHHHHHHHhhccccCCCCCC----CCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH-HHHh---
Confidence 4678899999999887543222211111 1123578899999998 77888999999999999998 7776
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCCcE----------EEEeccCCC--CCcChhHHHhhccCCceEEEEeccccccc
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDGFR----------VTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIG 1546 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~----------v~~v~~~~~--~~id~d~l~~~i~~~t~lv~l~~~~n~tG 1546 (2602)
++||+|++++|.|+++...+..+ |++ ++.++.+.+ ...|++++ +++++|++++|+||||
T Consensus 153 -~~gd~Vl~~~p~~~~~~~~~~~~---g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG 223 (449)
T 3qgu_A 153 -GSKPTVAVQDPSYPVYVDTSVMM---GMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTG 223 (449)
T ss_dssp -CSSSCEEEEESCCTHHHHHHHHH---TCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSEEEEESSCTTTC
T ss_pred -CCCCEEEEcCCCChhHHHHHHHc---CCcccccccccceeEEEecccccCCcCChhHc-----CCCCEEEEeCCCCCCC
Confidence 79999999999999998888777 777 888887754 33444322 7899999999999999
Q ss_pred cccC---hHHHHHHhhhcCCEEEEecccccC----cccccCCC----CCccEEEEccccccCCCc--eEEEEEecCCCCc
Q psy15216 1547 VIQP---ILEIGELCRSKGVIFHCDAAQAVG----KIDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTR 1613 (2602)
Q Consensus 1547 ~~~~---l~~I~~ia~~~gi~vivD~a~~~g----~~~~~l~~----~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~ 1613 (2602)
.++| +++|+++|++||+++|+|++|+.. ..+.++.. .+.++++.|+||.+|++| +||+++++++++.
T Consensus 224 ~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 303 (449)
T 3qgu_A 224 AAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYA 303 (449)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCT
T ss_pred CcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhh
Confidence 9998 778888899999999999999752 22222222 245688999999888777 8999999887653
Q ss_pred -cccccccCCccccCCCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEE
Q psy15216 1614 -IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLN 1691 (2602)
Q Consensus 1614 -l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~ 1691 (2602)
.......+.........+.+.+.+.+..+++.. ....+++.++++.++++++.+.|.+ . ++.+..+.. .....
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~ 378 (449)
T 3qgu_A 304 NGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTE-M-GFSVYGGDD---APYIW 378 (449)
T ss_dssp TSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCEEESSS---SSEEE
T ss_pred hhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeeeCCCC---eeEEE
Confidence 000000000001112235566666666666653 3356788899999999999999988 3 666554322 22333
Q ss_pred EEEecCCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1692 ISFNFIEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1692 ~~~~~~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+.++..+..++...| +||.+++|..|... ..+++|||+. .+.+++++++++|++.
T Consensus 379 ~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~-----------------~~~~iRis~~--~~~e~i~~~l~~l~~~ 436 (449)
T 3qgu_A 379 VGFPGKPSWDVFAEILERCNIVTTPGSGYGPA-----------------GEGFVRASAF--GSRENILEAVRRFKEA 436 (449)
T ss_dssp EECTTSCHHHHHHHHHHHHCEECEEGGGGCGG-----------------GTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHCCEEEecchHhCCC-----------------CCCeEEEEec--CCHHHHHHHHHHHHHH
Confidence 444434556666555 49999999887542 1389999965 4999999999999973
No 320
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.86 E-value=1.4e-20 Score=244.54 Aligned_cols=308 Identities=13% Similarity=0.091 Sum_probs=219.5
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHH-HhCCc
Q psy15216 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGF 111 (2602)
Q Consensus 33 ~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~ 111 (2602)
|.+++...+...++++++++++|.+ +.+++++| ++|+++++.++. ++||+|+++.++|+++...+... +..|+
T Consensus 44 ~~~~~~~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~a~~~~~~~~~----~~g~~vl~~~~~~~~~~~~~~~~~~~~g~ 117 (386)
T 1cs1_A 44 HDYSRRGNPTRDVVQRALAELEGGA-GAVLTNTG-MSAIHLVTTVFL----KPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_dssp CSBTTTCCHHHHHHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHC----CTTCEEEEETTCCHHHHHHHHHHHTTTSC
T ss_pred cceeCCCCccHHHHHHHHHHHhCCC-cEEEeCCH-HHHHHHHHHHHh----CCCCEEEEecCCcHhHHHHHHHHHHhcCC
Confidence 3444444567889999999999986 56666555 999999999886 79999999999999877766443 66799
Q ss_pred EEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccccccCCCCCccE
Q psy15216 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (2602)
Q Consensus 112 ~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~ 191 (2602)
+++.++.+ |++++++++++++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+.....+ .+++|+
T Consensus 118 ~~~~~~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~di 191 (386)
T 1cs1_A 118 RVLFVDQG-----DEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL-ALGADL 191 (386)
T ss_dssp EEEEECTT-----CHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GGTCSE
T ss_pred EEEEeCCC-----CHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc-ccCceE
Confidence 99999864 899999999999999999999999999999999999999999999999999887654333 467899
Q ss_pred EEeccccccC-CCCc--EEEEEec-CCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q psy15216 192 MSFSAHKIYG-PKGI--GALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (2602)
Q Consensus 192 ~~~S~~K~~G-p~G~--G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~ 267 (2602)
+++|+||++| |.+. |++++++ ++++.+.+...++ .++.+....+++..+++ .+....++..++++
T Consensus 192 ~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~-------~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~ 260 (386)
T 1cs1_A 192 VLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNI-------GVTGGAFDSYLLLRGLR----TLVPRMELAQRNAQ 260 (386)
T ss_dssp EEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHH-------TCBCCHHHHHHHHHHHT----THHHHHHHHHHHHH
T ss_pred EEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhc-------CCCCCHHHHHHHHhccc----HHHHHHHHHHHHHH
Confidence 9999999766 4442 9999986 6666665543211 23445544444434444 23445555666777
Q ss_pred HHHHHHhhccCceEEe-CCC-------------CCCCCceEEEEEcccChhHHHHHh--CCeEEcc---c------ccCC
Q psy15216 268 RLYNGLMESIEEIYIN-GDM-------------NNRIPHNLNISFNFIEGESLLMAI--KDIAVSS---G------SACT 322 (2602)
Q Consensus 268 ~l~~~L~~~~~g~~l~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~---g------~~~~ 322 (2602)
.+.+.|.+ .+.+.-. .+. ......++.+.++.. ...+...| .||.++. | .+|.
T Consensus 261 ~l~~~l~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~ 338 (386)
T 1cs1_A 261 AIVKYLQT-QPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD-EQTLRRFLGGLSLFTLAESLGGVESLISHAA 338 (386)
T ss_dssp HHHHHHTT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC-HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGG
T ss_pred HHHHHHhc-CCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC-HHHHHHHHHhCCcceEcccCCCcceeeeccc
Confidence 77777766 5554322 111 011234455555432 34454555 6888873 3 2222
Q ss_pred CC--CCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 323 SA--SLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 323 ~~--~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.. ...++..+..+|+. ++++|||++.++++++++++.++|++.
T Consensus 339 ~~~~~~~~~~~~~~~g~~----~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 339 TMTHAGMAPEARAAAGIS----ETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp GTTTTTSCHHHHHHHTCC----TTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHhcCCC----CCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 11 12244556666765 389999999999999999999999853
No 321
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.86 E-value=1.5e-20 Score=246.73 Aligned_cols=315 Identities=12% Similarity=0.133 Sum_probs=229.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCC
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 1483 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd 1483 (2602)
+.++.+.+++.+.++......+ .+...+.......++++++++++|.+ ..++++++++|+..++.++. ++||
T Consensus 73 ~~~p~v~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~~l~~~~----~~gd 144 (409)
T 3kki_A 73 ANHPLIKARLAKSLLEEQQSLF--MSASFLQNDYDKPMIEKRLAKFTGFD--ECLLSQSGWNANVGLLQTIC----QPNT 144 (409)
T ss_dssp TTCHHHHHHHHHHHHSCCCCCC--SBGGGGCSTTTSCHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHC----CTTC
T ss_pred cCCHHHHHHHHHHHHHcCCCCC--ccccccCCcHHHHHHHHHHHHHhCCC--eEEEecchHHHHHHHHHHhc----CCCC
Confidence 4578999999998875321111 12222222345678999999999975 35666777899999999886 8999
Q ss_pred EEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEeccccccccccChHHHHHHhhhcC
Q psy15216 1484 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGELCRSKG 1562 (2602)
Q Consensus 1484 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~g 1562 (2602)
.|+++++.|+++...+... |++++.++. .|+++|++++++ ++++|++++++||||.+.|+++|.++|++||
T Consensus 145 ~Vl~~~~~~~~~~~~~~~~---g~~~~~~~~-----~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~ 216 (409)
T 3kki_A 145 NVYIDFFAHMSLWEGARYA---NAQAHPFMH-----NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFG 216 (409)
T ss_dssp EEEEETTSCHHHHHHHHHT---TCEEEEECT-----TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHT
T ss_pred EEEECCCcCHHHHHHHHHc---CCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcC
Confidence 9999999999988776655 888888764 589999999985 5899999999999999999999999999999
Q ss_pred CEEEEecccccCccc---------ccCCCCCccEEEEccccccCCCceEEEEEecCCCCccccccccCCccccCCCCCcc
Q psy15216 1563 VIFHCDAAQAVGKID---------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLA 1633 (2602)
Q Consensus 1563 i~vivD~a~~~g~~~---------~~l~~~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~ 1633 (2602)
+++|+|++|+.+... .++. .++|+++.|+||.+|+.| |+++.++++++.+......+ .+ .++.+
T Consensus 217 ~~li~De~~~~g~~g~~g~~~~~~~~~~-~~~di~~~s~sK~~~~~g-g~v~~~~~~~~~~~~~~~~~----~~-~~~~~ 289 (409)
T 3kki_A 217 CALLVDESHSLGTHGPNGAGLLAELGLT-REVHFMTASLAKTFAYRA-GAIWCNNEVNRCVPFISYPA----IF-SSTLL 289 (409)
T ss_dssp CEEEEECTTTTTTSSGGGCCHHHHHTCG-GGCSEEEEESSSTTCSSC-EEEEESSSGGGTHHHHCHHH----HH-SBCCC
T ss_pred CEEEEECCccccccCCCCCcchhhcCCC-CCCCEEEeecchhhCCCc-eEEEECHHHHHHHHHhCcCc----cc-cCCCc
Confidence 999999999865431 1121 257899999999888775 99999988776654321100 01 22355
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecC-CcHHHHHhc--CCEE
Q psy15216 1634 THQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-EGESLLMAI--KDIA 1710 (2602)
Q Consensus 1634 ~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~L--~gI~ 1710 (2602)
...++++.++++..... ++.++++.++++++.+.|.+ . ++.+.+ ...+..+.++.. +..++...| +||.
T Consensus 290 ~~~~aa~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~-~-g~~~~~-----~~~~~~~~~~~~~~~~~~~~~L~~~Gv~ 361 (409)
T 3kki_A 290 PYEAAGLETTLEIIESA-DNRRQHLDRMARKLRIGLSQ-L-GLTIRS-----ESQIIGLETGDERNTEKVRDYLESNGVF 361 (409)
T ss_dssp HHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHT-T-TCCCCC-----SSSEEEEEEESHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHH-c-CCccCC-----CCCEEEEEeCCHHHHHHHHHHHHHCCce
Confidence 56666777778765443 67888889999999999987 3 544331 123444444432 234566555 7999
Q ss_pred EccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1711 VSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1711 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+++...+..+ ...+++||+++.++|++++++++++|++.
T Consensus 362 v~~~~~~~~~----------------~~~~~iRi~~~~~~t~e~i~~~~~~l~~~ 400 (409)
T 3kki_A 362 GSVFCRPATS----------------KNKNIIRLSLNSDVNDEQIAKIIEVCSDA 400 (409)
T ss_dssp CEEECTTSSC----------------TTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EeeeCCCCcC----------------CCCcEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 8764432111 12378999999999999999999999974
No 322
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.86 E-value=2.3e-20 Score=247.80 Aligned_cols=307 Identities=15% Similarity=0.144 Sum_probs=221.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCC---------cEEEeCCHHHHHHHHHHhcccccc---------------cCCCE
Q psy15216 33 HIYGWTAEKAIEKARNEVAQLIYADPR---------EIIWTSGATESNNLAIKGAAHFYK---------------KRGKH 88 (2602)
Q Consensus 33 ~~~~~~~~~~~~~~r~~lA~~~g~~~~---------~Iv~t~g~T~al~~~~~~l~~~~~---------------~~gd~ 88 (2602)
+..+.....+.+++.+++++++|.+.+ ..++|+|+|+|+..++.+...... .++++
T Consensus 105 ~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~ 184 (475)
T 3k40_A 105 WIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLV 184 (475)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEE
T ss_pred ccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeE
Confidence 444566677888899999999998643 589999999999998888743211 24579
Q ss_pred EEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCC------ceEEEEecccCcccccccHHHHHHHH
Q psy15216 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD------TILVSVMLVNNEIGVIQPILEIGELC 162 (2602)
Q Consensus 89 Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~------tklv~i~~~~npTG~~~~l~~I~~la 162 (2602)
|+++..+|+++..++... |++++.+++++++ +|+++|+++|+++ +.+|++++++|+||.+.|+++|+++|
T Consensus 185 vi~s~~~H~s~~~~~~~~---g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la 260 (475)
T 3k40_A 185 GYCSDQAHSSVERAGLLG---GVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVG 260 (475)
T ss_dssp EEEETTSCHHHHHHHHHH---TCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred EEECCCchHHHHHHHHHc---CCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHH
Confidence 999999999999888876 9999999998889 9999999999754 67899999999999999999999999
Q ss_pred HhcCCEEEEeccccccccccc-----CCCC-CccEEEecccc-ccCCCCcEEEEEecCC-C-Ccc--cc-eecCCCc---
Q psy15216 163 RSKGVIFHCDAAQAVGKIDIN-----IQNY-KVDLMSFSAHK-IYGPKGIGALYIRRNP-R-TRI--EA-QIHGGGH--- 227 (2602)
Q Consensus 163 ~~~g~~livD~a~a~g~~~~d-----l~~~-~~D~~~~S~~K-~~Gp~G~G~l~~~~~~-~-~~l--~~-~~~g~~~--- 227 (2602)
++||+++|+|++|+.+....+ +... .+|++++++|| +++|.|+|++++++.. . +.+ .+ .+.....
T Consensus 261 ~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~ 340 (475)
T 3k40_A 261 NKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSA 340 (475)
T ss_dssp HHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC-------------------
T ss_pred HHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCC
Confidence 999999999999987643211 1111 36999999999 6679999999998652 2 111 11 1111000
Q ss_pred ----cccccccCcchhHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEccc-
Q psy15216 228 ----EYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI- 301 (2602)
Q Consensus 228 ----~~~~~~gt~~~~~~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~- 301 (2602)
...+..+. + ...+++.++++ +..+++++++++..++++++.+.|.+ .++++++.++. ..++.|.++..
T Consensus 341 ~~~~~~~~~~sr-~-~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~l~~~~~---~~iv~f~~~~~~ 414 (475)
T 3k40_A 341 PDYRHWQIPLGR-R-FRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVA-DSRFELAAEIN---MGLVCFRLKGSN 414 (475)
T ss_dssp --------CCCG-G-GTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-STTEEESSCCB---TTEEEEEESSCH
T ss_pred CCcccccccCCC-c-ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEecCCc---eEEEEEEeCCch
Confidence 01111111 2 23455667777 34567899999999999999999988 78999986543 24556666532
Q ss_pred -ChhHHHHHh--CCe-EEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecC-CCCCHHHHHHHHHHHHhh
Q psy15216 302 -EGESLLMAI--KDI-AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 302 -~~~~~~~~L--~gI-~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~-~~~t~edid~li~~L~~~ 369 (2602)
...++.+.| +|+ .+.++... ...++|+++. +.+|++||++++++|++.
T Consensus 415 ~~~~~l~~~L~~~g~~~~~~~~~~--------------------g~~~lR~~~~~~~tt~~di~~~~~~i~~~ 467 (475)
T 3k40_A 415 ERNEALLKRINGRGHIHLVPAKIK--------------------DVYFLRMAICSRFTQSEDMEYSWKEVSAA 467 (475)
T ss_dssp HHHHHHHHHHHHHTSCBCEEEEET--------------------TEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEEeeEEC--------------------CEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 234555555 333 22222110 1268999975 567999999999999974
No 323
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.86 E-value=2.4e-20 Score=242.65 Aligned_cols=306 Identities=14% Similarity=0.103 Sum_probs=216.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHH-HHhCCc
Q psy15216 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (2602)
Q Consensus 33 ~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~ 111 (2602)
|.+++...+..+++++++++++|. +++++++|+++|+.+++.++. ++||+|+++.+.|+++...+.. +.+.|+
T Consensus 73 ~~y~r~~~p~~~~l~~~la~~~g~--~~~~~~~sG~~Ai~~al~~l~----~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~ 146 (414)
T 3ndn_A 73 YVYSRYGNPTVSVFEERLRLIEGA--PAAFATASGMAAVFTSLGALL----GAGDRLVAARSLFGSCFVVCSEILPRWGV 146 (414)
T ss_dssp CCBTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTC----CTTCEEEEESCCCHHHHHHHHTHHHHTTC
T ss_pred cCcCCCCChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHh----CCCCEEEEcCCccchHHHHHHHHHHHcCc
Confidence 444444556789999999999996 478999999999999999987 8999999999999998877754 356799
Q ss_pred EEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccccccCCCCCccE
Q psy15216 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (2602)
Q Consensus 112 ~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~ 191 (2602)
++++++.+ |+++|+++++++|++|++++|+||||.+.|+++|+++|++||+++|+|++|+.+.....+ .+++|+
T Consensus 147 ~~~~v~~~-----d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~g~di 220 (414)
T 3ndn_A 147 QTVFVDGD-----DLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF-PLGVDV 220 (414)
T ss_dssp EEEEECTT-----CHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG-GGTCSE
T ss_pred EEEEeCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCCe
Confidence 99999865 899999999999999999999999999999999999999999999999999876543222 467899
Q ss_pred EEeccccccCCCC---cEEEEEecCCCC-cccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q psy15216 192 MSFSAHKIYGPKG---IGALYIRRNPRT-RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (2602)
Q Consensus 192 ~~~S~~K~~Gp~G---~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~ 267 (2602)
++.|+||++|++| +|+++++++.+. .+..... ...++.+....+.+...+ +.+....++..++++
T Consensus 221 v~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~-------~~g~~~~~~~a~~~~~~l----~~l~~r~~~~~~~a~ 289 (414)
T 3ndn_A 221 VVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMR-------HTGPAMSAFNAWVLLKGL----ETLAIRVQHSNASAQ 289 (414)
T ss_dssp EEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHH-------HHCCCCCHHHHHHHHHHG----GGHHHHHHHHHHHHH
T ss_pred EeccCCccccCCCCceEEEEEECHHHHHHHHHHHHH-------HcCCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 9999999888877 699999876554 3432211 111223333222222222 234556667778888
Q ss_pred HHHHHHhhccCceEEeCCCC---C-----------CCCceEEEEEccc------ChhHHHHHh--CCeEEcccccCCCC-
Q psy15216 268 RLYNGLMESIEEIYINGDMN---N-----------RIPHNLNISFNFI------EGESLLMAI--KDIAVSSGSACTSA- 324 (2602)
Q Consensus 268 ~l~~~L~~~~~g~~l~~~~~---~-----------~~~~~~~~~~~~~------~~~~~~~~L--~gI~v~~g~~~~~~- 324 (2602)
++.+.|.+ .|++.....+. . ....++.|.+++. ....++..+ .++.++.|..++..
T Consensus 290 ~l~~~L~~-~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~ 368 (414)
T 3ndn_A 290 RIAEFLNG-HPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVT 368 (414)
T ss_dssp HHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEE
T ss_pred HHHHHHhc-CCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceee
Confidence 88888877 57764332111 0 0133455566542 245677777 46677777654321
Q ss_pred -------CCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q psy15216 325 -------SLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLL 366 (2602)
Q Consensus 325 -------~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L 366 (2602)
...+.......|+. +++||+|+|....++.++.+.++|
T Consensus 369 ~p~~~~~~~~~~~~~~~~g~~----~~~iRlsvG~e~~~dli~dl~~al 413 (414)
T 3ndn_A 369 HPATTTHRAMGPEGRAAIGLG----DGVVRISVGLEDTDDLIADIDRAL 413 (414)
T ss_dssp CGGGTTTCTTHHHHHHHTTCC----TTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CccccccccCCHHHHHhcCCC----CCeEEEEeCcCCHHHHHHHHHHhh
Confidence 11233344556766 389999999755544444444443
No 324
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.86 E-value=4.6e-21 Score=249.33 Aligned_cols=299 Identities=14% Similarity=0.113 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHH-HhCCcEEEEeccC
Q psy15216 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPK 119 (2602)
Q Consensus 41 ~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~~~ 119 (2602)
+...++|+.+++++|.+ +.+++++| ++|+++++. +. ++||+|+++.+.|+++...+..+ +..|++++.++.+
T Consensus 67 p~~~~l~~~la~~~g~~-~~i~~~sG-~~ai~~~~~-l~----~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 139 (403)
T 3cog_A 67 PTRNCLEKAVAALDGAK-YCLAFASG-LAATVTITH-LL----KAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCS 139 (403)
T ss_dssp HHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHHHHT-TS----CTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred chHHHHHHHHHHHhCCC-cEEEECCH-HHHHHHHHH-Hh----CCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC
Confidence 46788999999999986 55666555 699999988 65 79999999999999877766533 5679999999865
Q ss_pred CCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcC-CEEEEecccccccccccCCCCCccEEEecccc
Q psy15216 120 NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG-VIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 198 (2602)
Q Consensus 120 ~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g-~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K 198 (2602)
|+++++++++++|++|++++|+||||.+.|+++|+++|+++| +++|+|++|+.+.....+. +++|+++.|+||
T Consensus 140 -----d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~-~~~div~~S~sK 213 (403)
T 3cog_A 140 -----KIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLA-LGADISMYSATK 213 (403)
T ss_dssp -----SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTT-TTCSEEEEETTT
T ss_pred -----CHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccc-cCCeEEEEcChh
Confidence 899999999999999999999999999999999999999999 9999999998875322232 578999999999
Q ss_pred ccC-CCC--cEEEEEe-cCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Q psy15216 199 IYG-PKG--IGALYIR-RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLM 274 (2602)
Q Consensus 199 ~~G-p~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~ 274 (2602)
++| +.| +|+++++ +++.+.+.+...++ .++++....+++..+++.... ..++..+++..+.+.+.
T Consensus 214 ~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~-------g~~~~~~~~~~~~~~l~~l~~----r~~~~~~n~~~l~~~l~ 282 (403)
T 3cog_A 214 YMNGHSDVVMGLVSVNCESLHNRLRFLQNSL-------GAVPSPIDCYLCNRGLKTLHV----RMEKHFKNGMAVAQFLE 282 (403)
T ss_dssp TTTCSSCCCCEEEEECCHHHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHTTHHH----HHHHHHHHHHHHHHHHH
T ss_pred hccCCCCCeEEEEEECcHHHHHHHHHHHHhc-------CCCCCHHHHHHHHhhhhHHHH----HHHHHHHHHHHHHHHHh
Confidence 665 554 4999985 56656665443211 223455555444455553322 23333444444444444
Q ss_pred hc-------------cCceEEeCCCCCCCCceEEEEEccc--ChhHHHHHhCCeEEc---ccc------cCCCCC--CCh
Q psy15216 275 ES-------------IEEIYINGDMNNRIPHNLNISFNFI--EGESLLMAIKDIAVS---SGS------ACTSAS--LEP 328 (2602)
Q Consensus 275 ~~-------------~~g~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~L~gI~v~---~g~------~~~~~~--~~~ 328 (2602)
+. .|++.+..+.......++.+.++.. +...++.. .+|.++ .|. +|.... ..+
T Consensus 283 ~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~l~~-~~i~~~~~s~G~~~sl~~~p~~~~~~~~~ 361 (403)
T 3cog_A 283 SNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKN-LKLFTLAESLGGFESLAELPAIMTHASVL 361 (403)
T ss_dssp TCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHH-CSSSEECSCCSSSSCEEECTTTTTTTTSC
T ss_pred cCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHHHHHHHHh-CCcceEccCCCCcceeeecccccccccCC
Confidence 31 1222222111111234445555432 12233333 355433 232 332211 123
Q ss_pred HHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 329 SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 329 ~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
...+..+|++ +++||||++.++++++++++.++|++
T Consensus 362 ~~~~~~~g~~----~~~iRlSvg~e~~~d~i~~l~~al~~ 397 (403)
T 3cog_A 362 KNDRDVLGIS----DTLIRLSVGLEDEEDLLEDLDQALKA 397 (403)
T ss_dssp HHHHHHHTCC----TTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC----cCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4455667765 38999999999999999999999985
No 325
>4eb5_C NIFU protein (NIFU-1); scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_C*
Probab=99.86 E-value=3.3e-22 Score=211.70 Aligned_cols=92 Identities=54% Similarity=0.955 Sum_probs=85.9
Q ss_pred hhhHhhhhcccCCCCCCCCCCCCCcceeeeeCCCCcccEEEEEEEEcCCCceEeeeeeccccchhHhhHHHHHHHHcCCC
Q psy15216 374 SYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSSLVTEWVKGKT 453 (2602)
Q Consensus 374 ~y~~~~~~hy~~p~n~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~~~~~i~~~~~~~~gc~~~~a~~s~~~~~~~g~~ 453 (2602)
+|+++++|||+||||+|.+++++ ++++++||+|||.|+|+|+|+ +|+|+|++|+|+||+++|||||++|++++|||
T Consensus 1 lY~e~Ildh~~nPrn~G~l~~~d---~~~~~~nP~CGD~i~l~lkv~-d~~I~D~~F~g~GCais~ASaS~mtelv~GKt 76 (153)
T 4eb5_C 1 MYSDKVFDHFQNPRNVGKIEDAD---GVGTVGNPVCGDLMTIYIKVK-DNRIEDIKFQTFGCAAAIATSSMATEMAKGKT 76 (153)
T ss_dssp -CCHHHHHHHHSCSSBSCCSSCS---EEEEEECTTTCCEEEEEEEES-SSBEEEEEEEEESCHHHHHHHHHHHHHHTTCB
T ss_pred CcHHHHHHHHhCCCCCCCCCCCC---eEEEeCCCCCCCEEEEEEEec-CCeEEEEEEEEeCcHHHHHHHHHHHHHHcCCC
Confidence 69999999999999999999887 788999999999999999995 78999999999999999999999999999999
Q ss_pred hhhhhhccccchhhhh
Q psy15216 454 LDEAMSIKNTDIAEEL 469 (2602)
Q Consensus 454 ~~e~~~i~~~~i~~~l 469 (2602)
++||..+++++++..|
T Consensus 77 leEA~~i~~~~i~~~L 92 (153)
T 4eb5_C 77 IEEALKITRDAVAEAL 92 (153)
T ss_dssp HHHHTTCCHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHh
Confidence 9999999988776554
No 326
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.86 E-value=9.8e-22 Score=252.41 Aligned_cols=306 Identities=18% Similarity=0.186 Sum_probs=200.3
Q ss_pred eEEEEEcCcccEEEEEEECCeeE-EEeCCCCCccccEE-EEEecCCcEEEcHHHHhhhccCCCCchhhhhhhhCCCCCCC
Q psy15216 638 VSIGIDFGTTNSLVAIVRNNIPE-VLKDKYGYFLIPSI-VRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNI 715 (2602)
Q Consensus 638 ~vvGID~GTt~s~va~~~~~~~~-ii~~~~g~~~~PS~-v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~ 715 (2602)
..|+||+||+++.+++..++.|. ++++.-|....+++ +.+ .+...++|.+|+... . ...+++
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~-~~~~~~vG~~a~~~~----~--~~~~~~--------- 69 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM-GQKDSYVGDEAQSKR----G--ILTLKY--------- 69 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC--------CCEEHHHHHHHT----T--SEEEEC---------
T ss_pred ceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCC-CCCCeEechhHhhcC----c--ccceec---------
Confidence 35899999999999998766664 44444443333321 111 123468999986541 1 111221
Q ss_pred CCCCCCeeeecCCCceEEEEeCceeCHHHHHHHHHHHHHHHHHHhhcCcc--ceEEEEEcCCCCHHHHHHHHHHH-HHcC
Q psy15216 716 NTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRI--FGAVITVPAYFNDIQRQFTKNAA-KLAG 792 (2602)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~--~~~ViTVPa~f~~~qr~~~~~Aa-~~AG 792 (2602)
|+ ..+.+.--+....+++|+.. +.++... ..++||+|++++..+|+++.+++ +.+|
T Consensus 70 -----Pi-------------~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g 128 (375)
T 2fxu_A 70 -----PI-------------EHGIITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN 128 (375)
T ss_dssp -----SE-------------ETTEECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTC
T ss_pred -----cc-------------cCCcccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcC
Confidence 11 11222223344445555442 3344333 35999999999999999888765 7889
Q ss_pred CceEEEechhHHHHHHhhhccCcccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCcchHHHHHHHHHHHHHHhh
Q psy15216 793 LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFL 872 (2602)
Q Consensus 793 l~~~~li~EPtAAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~ 872 (2602)
++.+.+++||+|||++|+. .+.+|+|+||||||++.+ .+|. .+....+...+||+++|+.|.+++.++..
T Consensus 129 ~~~~~~~~e~~aaa~a~g~------~~~lVvDiG~gtt~v~~v--~~G~-~~~~~~~~~~~GG~~lt~~l~~~l~~~~~- 198 (375)
T 2fxu_A 129 VPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVTHNVPI--YEGY-ALPHAIMRLDLAGRDLTDYLMKILTERGY- 198 (375)
T ss_dssp CSEEEEEEHHHHHHHHTTC------SSEEEEEECSSCEEEEEE--ETTE-ECGGGCEEESCCHHHHHHHHHHHHHHHTC-
T ss_pred cceEEEccchheeeeecCC------CeEEEEEcCCCceEEeEe--ECCE-EeccceEEeccCHHHHHHHHHHHHHhcCC-
Confidence 9999999999999999875 357999999999998765 4553 23333455799999999999999987621
Q ss_pred ccCCHHHHHHHHHHHHHHHHHcccc--------------cceEEEEEecCCceEEEEeCHHHH---HHHHHHH-----HH
Q psy15216 873 KKLSYKDVNILMIKSREIKELLSYQ--------------SSVKLNVKLSDKKIVNITIDMKQF---FTITQHL-----VN 930 (2602)
Q Consensus 873 ~~~~~~~~~~l~~~~e~~K~~LS~~--------------~~~~~~i~~~~~~~~~~~itr~~f---e~l~~~~-----~~ 930 (2602)
...... -...+|++|+.+... ......+++.++. .+++++++| |.+++|. ..
T Consensus 199 ~~~~~~----~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lpdg~--~i~i~~erf~~~E~lf~p~~~~~~~~ 272 (375)
T 2fxu_A 199 SFVTTA----EREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ--VITIGNERFRCPETLFQPSFIGMESA 272 (375)
T ss_dssp CCCSHH----HHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTTSC--EEEESTHHHHHHHTTTCGGGGTCCSC
T ss_pred CCCcHH----HHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECCCCC--EEEEChhheechHhhCCCccCCCCCC
Confidence 111110 113445555544211 0112334455554 467888887 4455553 24
Q ss_pred HHHHHHHHHHHHcC--CCccccceEEEecCccchHHHHHHHHhhcc--------CcccCcCCcchHhHHHHHHHhH
Q psy15216 931 RTILLSSKALMDAN--LTIKDINNVILVGGSTRMKHIHEGVSNFFK--------TTLLTSIDPDKAVVFGAAIQAN 996 (2602)
Q Consensus 931 ~~~~~i~~~l~~a~--~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~--------~~~~~~~~p~~aVa~GAa~~a~ 996 (2602)
.+.++|.+.|..+. +....++.|+|+||+|++|.++++|++.++ .++..+.+|..++++||+++|.
T Consensus 273 ~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 273 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp CHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 57788888888663 223456889999999999999999998874 3455678999999999999996
No 327
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.86 E-value=2.3e-21 Score=255.06 Aligned_cols=341 Identities=12% Similarity=0.075 Sum_probs=230.8
Q ss_pred CCCHHHHHHHHHHHhhcc-C-CCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccC
Q psy15216 1404 PIDPRVVDKMIPYLRVQF-G-NPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 1481 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~-~-np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~ 1481 (2602)
+.++.+.+++.+.++... . +++. .+ ...+..++++.+++++|++ ++++++|+|+|++.++.++. +++
T Consensus 13 ~~~~~~~~a~~~~~~~~~~~~~~~~----~g--~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~---~~~ 81 (418)
T 2c81_A 13 QHSDRTRRKIEEVFQSNRWAISGYW----TG--EESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALG---IGE 81 (418)
T ss_dssp CCCHHHHHHHHHHHHHTCCSTTSBC----CS--SCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTT---CCT
T ss_pred CCCHHHHHHHHHHHhcCCccccCcc----cC--CHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcC---CCC
Confidence 457889999999887631 1 1111 11 1235788999999999986 67888889999999999983 279
Q ss_pred CCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhh
Q psy15216 1482 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS 1560 (2602)
Q Consensus 1482 gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~ 1560 (2602)
||+|+++.++|+++...+... |++++.++.++ ++.+|+++|+++++++|++|+++ ||||...|+++|.++|++
T Consensus 82 gd~Vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~~~~~ 155 (418)
T 2c81_A 82 GDEVIVPSLTWIATATAVLNV---NALPVFVDVEADTYCIDPQLIKSAITDKTKAIIPV---HLFGSMANMDEINEIAQE 155 (418)
T ss_dssp TCEEEEESSSCTHHHHHHHHT---TCEEEEECBCTTTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCCHHHHHHHHHH
T ss_pred cCEEEECCCccHhHHHHHHHc---CCEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEEe---CCcCCcccHHHHHHHHHH
Confidence 999999999999998776654 99999999886 67899999999999999988875 479999999999999999
Q ss_pred cCCEEEEecccccCcc-c-ccCCCCCccEEEEcc--ccccCCCceEEEEEe-cCCCCccccccccCCccc--------cC
Q psy15216 1561 KGVIFHCDAAQAVGKI-D-INIQNYKVDLMSFSA--HKIYGPKGIGALYIR-RNPRTRIEAQIHGGGHEY--------GL 1627 (2602)
Q Consensus 1561 ~gi~vivD~a~~~g~~-~-~~l~~~~~D~~v~S~--~K~~gp~G~G~l~~~-~~~~~~l~~~~~g~~~~~--------~~ 1627 (2602)
||+++|+|++|+.+.. . ..+..+ .|+.++|+ ||++|+..+|+++.+ +++++.+.+...++.... .+
T Consensus 156 ~~~~li~D~a~~~~~~~~~~~~~~~-~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (418)
T 2c81_A 156 HNLFVIEDCAQSHGSVWNNQRAGTI-GDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGD 234 (418)
T ss_dssp TTCEEEEECTTCTTCEETTEETTSS-SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTC
T ss_pred CCCEEEEECcccccCccCCEecccc-cceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCccccccccccccch
Confidence 9999999999998763 1 112222 35666666 998777336888885 455555544332221110 11
Q ss_pred C--CCCcchhH----HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCC---CCCceEEEEEe--
Q psy15216 1628 R--SGTLATHQ----IVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN---RIPHNLNISFN-- 1695 (2602)
Q Consensus 1628 ~--~gt~~~~~----~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~---~~~~~~~~~~~-- 1695 (2602)
. .+++...+ +..+.+++. .....+++..++.+++++++.+.|.+ ++++.+..++.. ..+....+.++
T Consensus 235 ~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (418)
T 2c81_A 235 MQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNAIREKNAMFLNDALSK-IDGIKVMKRPPQVSRQTYYGYVFRFDPV 313 (418)
T ss_dssp BSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTT-STTEEECCCCTTEEECCCSEEEEEECGG
T ss_pred hhccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCcccCCCCCCCcccccEEEEEEEccc
Confidence 1 11111110 111222232 11234677788888899999999987 789988754332 12234446665
Q ss_pred ---cCCcHHHHHhc--C-CEE---EccccccCCCCCChhHHH-------------------HHcCCCccccCCeEEEecC
Q psy15216 1696 ---FIEGESLLMAI--K-DIA---VSSGSACTSASLEPSYVL-------------------RALGCNDELAHSSIRFTIG 1747 (2602)
Q Consensus 1696 ---~~~~~~~~~~L--~-gI~---v~~g~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~iRls~~ 1747 (2602)
+.+..++...| + ||. ++++..+.. ..+.+.. ..++..+....+.|||+++
T Consensus 314 ~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~ 391 (418)
T 2c81_A 314 KFGGLNADQFCEILREKLNMGTFYLHPPYLPVH--KNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHA 391 (418)
T ss_dssp GTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGG--GCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGG
T ss_pred cccccCHHHHHHHHHHcCCCCcccccccccccc--cCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCC
Confidence 34567777777 5 999 887763311 1111100 0001111112368999999
Q ss_pred CCC-CHHHHHHHHHHHHHh
Q psy15216 1748 RFT-TEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1748 ~~~-t~edid~li~~L~~~ 1765 (2602)
.++ |.+||++++++|++.
T Consensus 392 ~~~gt~edi~~~~~~l~~~ 410 (418)
T 2c81_A 392 ILLAEPSHLSLLVDAVAEL 410 (418)
T ss_dssp GGGSCHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHH
Confidence 999 999999999999973
No 328
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.86 E-value=9.3e-21 Score=245.96 Aligned_cols=303 Identities=14% Similarity=0.117 Sum_probs=211.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHH-HHhCCc
Q psy15216 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (2602)
Q Consensus 33 ~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~ 111 (2602)
+.+++...+..+++++++++++|.+ +.++++|+++|+.+++.++. ++||+|+++.+.|+++...+.. ++..|+
T Consensus 51 ~~y~~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~~~~----~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 124 (389)
T 3acz_A 51 HIYSRLGNPTVEQFEEMVCSIEGAA--GSAAFGSGMGAISSSTLAFL----QKGDHLIAGDTLYGCTVSLFTHWLPRFGI 124 (389)
T ss_dssp CCBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHTTTC----CTTCEEEEESSCCHHHHHHHHHHHHHTTC
T ss_pred cccCCCCChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHh----CCCCEEEEeCCCchHHHHHHHHHHHHcCC
Confidence 3344444567889999999999986 66677778899999999886 7999999999999998777654 466799
Q ss_pred EEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccc--cccCCCCCc
Q psy15216 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI--DINIQNYKV 189 (2602)
Q Consensus 112 ~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~--~~dl~~~~~ 189 (2602)
+++.++. .|+++++++++++|++|++++|+||||.+.|+++|.++|++||+++|+|++|+.+.. +++ +++
T Consensus 125 ~~~~v~~-----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~---~~~ 196 (389)
T 3acz_A 125 EVDLIDT-----SDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPLE---LGA 196 (389)
T ss_dssp EEEEECT-----TCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGG---TTC
T ss_pred EEEEECC-----CCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCccc---cCC
Confidence 9999986 389999999999999999999999999999999999999999999999999987653 443 578
Q ss_pred cEEEeccccccC-CCC--cEEEEEec-CCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHH
Q psy15216 190 DLMSFSAHKIYG-PKG--IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFL 265 (2602)
Q Consensus 190 D~~~~S~~K~~G-p~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l 265 (2602)
|+++.|+||++| +.+ .|++++++ ++++.+.+.... ..++.+....+++..+++. +....++..++
T Consensus 197 di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~-------~g~~~~~~~~~~~~~~l~~----l~~r~~~~~~~ 265 (389)
T 3acz_A 197 DIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKD-------AGSLMAPMDAFLCARGMKT----LPIRMQIHMEN 265 (389)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHH-------HCCCCCHHHHHHHHHHHTT----HHHHHHHHHHH
T ss_pred eEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHh-------cCCCCCHHHHHHHHcCccH----HHHHHHHHHHH
Confidence 999999999665 444 49999998 777666543311 1223333333333344442 23334445555
Q ss_pred HHHHHHHHhhccCceEEe-CC--CC-----------CCCCceEEEEEcccChhHHHHHh--CCeEEcc---c------cc
Q psy15216 266 QKRLYNGLMESIEEIYIN-GD--MN-----------NRIPHNLNISFNFIEGESLLMAI--KDIAVSS---G------SA 320 (2602)
Q Consensus 266 ~~~l~~~L~~~~~g~~l~-~~--~~-----------~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~---g------~~ 320 (2602)
+..+.+.+.+ .+.+.-+ .+ .. .....++.|.+++ ..+....+ .++.++. | .+
T Consensus 266 ~~~l~~~l~~-~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~ 342 (389)
T 3acz_A 266 GLKVAKFLEQ-HEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS--FEAAKKLMEHLKVCTLAVSLGCVDTLIEH 342 (389)
T ss_dssp HHHHHHHHHH-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--HHHHHHHHTTCSSSEEBSCCCCSSCEEEC
T ss_pred HHHHHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC--HHHHHHHHHhCCCcEECcCCCCcccEeeC
Confidence 6666666655 3333211 11 00 1123445555543 33333333 4666655 4 55
Q ss_pred CCCCC--CChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 321 CTSAS--LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (2602)
Q Consensus 321 ~~~~~--~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~ 367 (2602)
|.... ..+...+..+|++ +++||+|++.+++++.++.+.++|+
T Consensus 343 ~~~~~~~~~~~~~~~~~g~~----~~~iRlsvg~~~~~~li~~l~~al~ 387 (389)
T 3acz_A 343 PASMTHAAVPENIMRKQGIT----PELVRISVGIENVDDIIADLKQALE 387 (389)
T ss_dssp TTTTTTSSSCHHHHHHHTCC----TTEEEEECCSSCHHHHHHHHHHHHT
T ss_pred CcccccccCCHHHHHhcCCC----cCeEEEEeccCCHHHHHHHHHHHHh
Confidence 54331 1244555667775 3899999999988888888888775
No 329
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.86 E-value=8.9e-21 Score=241.57 Aligned_cols=300 Identities=16% Similarity=0.100 Sum_probs=223.6
Q ss_pred eeeeccCCC--CCCCHHHHHHHHHHHhh--ccCCCCCccchhHHHHHHHHHHHHHHHHHHhC---CCCCcEEEeCCHHHH
Q psy15216 1394 TNIVFKDAT--TPIDPRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIEKARNEVAQLIY---ADPREIIWTSGATES 1466 (2602)
Q Consensus 1394 ~~v~L~~~~--~~~~~~v~eal~~~l~~--~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g---~~~~~iv~t~gaT~a 1466 (2602)
..++++.+. .+.++.+.+++.+.+.. ..+++.. ...++|+.++++++ +++++|++|+|++++
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-----------~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~a 88 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDS-----------PDEELIEKILSYLDTDFLSKNNVSVGNGADEI 88 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCS-----------SCHHHHHHHHHHHTCSSCCGGGEEEESSHHHH
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC-----------chHHHHHHHHHHcCCCCCCHHHEEEcCChHHH
Confidence 456776443 35688999999887732 2223321 15689999999999 888899999999999
Q ss_pred HHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccc
Q psy15216 1467 NNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIG 1546 (2602)
Q Consensus 1467 l~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG 1546 (2602)
++.++.++ ||+|+++ |+|+++...+... |++++.++.++++.+|++++ +++++|++++|+||||
T Consensus 89 l~~~~~~~-------gd~Vl~~-p~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l-----~~~~~v~l~~p~nptG 152 (335)
T 1uu1_A 89 IYVMMLMF-------DRSVFFP-PTYSCYRIFAKAV---GAKFLEVPLTKDLRIPEVNV-----GEGDVVFIPNPNNPTG 152 (335)
T ss_dssp HHHHHHHS-------SEEEECS-SSCHHHHHHHHHH---TCEEEECCCCTTSCCCCCCC-----CTTEEEEEESSCTTTC
T ss_pred HHHHHHHh-------CCcEEEC-CCcHHHHHHHHHc---CCeEEEeccCCCCCCCHHHc-----CCCCEEEEeCCCCCCC
Confidence 99998875 7999999 9999987766655 99999999887777888877 6799999999999999
Q ss_pred cccChHHHHHHhhhcCCEEEEecccccCc--cccc-CCCCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccC
Q psy15216 1547 VIQPILEIGELCRSKGVIFHCDAAQAVGK--IDIN-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 1621 (2602)
Q Consensus 1547 ~~~~l~~I~~ia~~~gi~vivD~a~~~g~--~~~~-l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~ 1621 (2602)
.++|.++|.++++.+| ++|+|++|+... ...+ +...+.++++.|+||.+|++| +||+++++++++.+.+..
T Consensus 153 ~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~--- 228 (335)
T 1uu1_A 153 HVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVR--- 228 (335)
T ss_dssp CCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHS---
T ss_pred CCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhc---
Confidence 9999999999999889 999999997321 1122 233456799999999888778 799999877666554432
Q ss_pred CccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcHH
Q psy15216 1622 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGES 1701 (2602)
Q Consensus 1622 ~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~ 1701 (2602)
...+++...+.++.++|+. ..++++..+++.++++++.+.|.+ . ++.+. ++. .....+.++..+..+
T Consensus 229 ------~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~---~~~~~~~~~~~~~~~ 295 (335)
T 1uu1_A 229 ------LPFNVSYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALRE-M-GYRIT-DSR---GNFVFVFMEKEEKER 295 (335)
T ss_dssp ------CTTCSCHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHH-H-TCCBC-CCC---SSEEEEECCTHHHHH
T ss_pred ------CCCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CcEEc-CCC---CeEEEEECCCCCHHH
Confidence 1236677777777777774 245778888889999999999987 3 55433 221 222333333223445
Q ss_pred HHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1702 LLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1702 ~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
+...| +||.++++ .+++|+|++ +.+|+++++++|++
T Consensus 296 ~~~~l~~~gi~v~~~------------------------~~~iRis~~---~~~~i~~~~~~l~~ 333 (335)
T 1uu1_A 296 LLEHLRTKNVAVRSF------------------------REGVRITIG---KREENDMILRELEV 333 (335)
T ss_dssp HHHHHHHHTEEEEEE------------------------TTEEEEECC---CHHHHHHHHHHHHC
T ss_pred HHHHHHHCCEEEEEC------------------------CCeEEEEeC---CHHHHHHHHHHHHh
Confidence 55555 79998861 178999986 57899999999975
No 330
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.85 E-value=2.1e-20 Score=246.44 Aligned_cols=295 Identities=10% Similarity=0.072 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCCHHHHHH--HHHHhccccccc--C---------CCEEEEcCCCCcccHHHHHHHHh
Q psy15216 42 AIEKARNEVAQLIYADPREIIWTSGATESNN--LAIKGAAHFYKK--R---------GKHIITVQTEHKSVLDSIRKLEN 108 (2602)
Q Consensus 42 ~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~--~~~~~l~~~~~~--~---------gd~Vlv~~~~~~s~~~~~~~~~~ 108 (2602)
...++|+++++++++++++|++|+|++++++ +++.++. . + ||+|+++.|.|+++...+...
T Consensus 71 g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~----~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-- 144 (423)
T 3ez1_A 71 GLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALL----HGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTL-- 144 (423)
T ss_dssp CCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHH----TCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHH--
T ss_pred ChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHh----ccCCCccccccCCCCEEEEcCCCcHHHHHHHHHc--
Confidence 3578999999999999999999999999998 8888877 5 6 699999999999988877766
Q ss_pred CCcEEEEeccCCCCccChHHHHhhc--cCCceEEEE-ecccCcccccccHH---HHHHHH-HhcCCEEEEecccccccc-
Q psy15216 109 DGFRVTYLKPKNNGLITLSQLEEKI--CSDTILVSV-MLVNNEIGVIQPIL---EIGELC-RSKGVIFHCDAAQAVGKI- 180 (2602)
Q Consensus 109 ~G~~v~~v~~~~~~~ld~e~l~~~i--~~~tklv~i-~~~~npTG~~~~l~---~I~~la-~~~g~~livD~a~a~g~~- 180 (2602)
|++++.++.++++ +|+++|++++ ++++++|++ ++++||||.++|.+ +|+++| ++||+++|+|++|+....
T Consensus 145 -g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~ 222 (423)
T 3ez1_A 145 -GFELLTVDMQSDG-PDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLV 222 (423)
T ss_dssp -TCEEEEEEEETTE-ECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCC
T ss_pred -CCEEEeccCCCCC-CCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcC
Confidence 9999999987764 9999999999 578999875 58999999999977 788888 899999999999873211
Q ss_pred ------cccC-------CCCCccEEEeccccc-cCCCCcEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHH
Q psy15216 181 ------DINI-------QNYKVDLMSFSAHKI-YGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGE 246 (2602)
Q Consensus 181 ------~~dl-------~~~~~D~~~~S~~K~-~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~ 246 (2602)
+.++ ...+.++++.|+||. ++..++||+++++++++.+..... ....+++.....++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~a~~~ 295 (423)
T 3ez1_A 223 EEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLG-------AQSIGPNKVEQARHVK 295 (423)
T ss_dssp SSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHHHHHHHH-------HSCSCCCHHHHHHHHH
T ss_pred CCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHHHHHHHh-------hhccCCCHHHHHHHHH
Confidence 1111 133567999999995 333348999999877766654321 1123455555555555
Q ss_pred HHHH----HHHhHHHHHHHHHHHHHHHHHHHhhccC----ceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEc
Q psy15216 247 AFRL----ARIEMKEELKRILFLQKRLYNGLMESIE----EIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVS 316 (2602)
Q Consensus 247 al~~----~~~~~~~~~~~~~~l~~~l~~~L~~~~~----g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~ 316 (2602)
+++. ....+.+..+.+.+.++.+.+.|.+.++ ++.+..+.. ...+.+.++..+...+...| +||.++
T Consensus 296 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~l~~~gv~v~ 372 (423)
T 3ez1_A 296 FLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKG---GYFISLDTAEPVADRVVKLAEAAGVSLT 372 (423)
T ss_dssp HHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSB---SSCEEEEESSSCHHHHHHHHHHTTEECC
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCc---cEEEEEECCCCcHHHHHHHHHHCCcEEe
Confidence 5553 1234455555555666666655544222 366654432 34455666654556666655 799999
Q ss_pred c-cccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 317 S-GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 317 ~-g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+ |..|..+ .....+++||+++.. +++++++++++|++.
T Consensus 373 ~~g~~~~~~--------------~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~ 411 (423)
T 3ez1_A 373 PAGATYPAG--------------QDPHNRNLRLAPTRP-PVEEVRTAMQVVAAC 411 (423)
T ss_dssp CTTTTSSTT--------------CCSSSCEEEECCSSS-CHHHHHHHHHHHHHH
T ss_pred cCcccccCC--------------CCCCCCeEEEEcCCC-CHHHHHHHHHHHHHH
Confidence 8 5555421 112348999999765 999999999999974
No 331
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.85 E-value=8e-20 Score=243.48 Aligned_cols=308 Identities=14% Similarity=0.126 Sum_probs=222.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCC----------cEEEeCCHHHHHHHHHHhcccccc---------------cCCC
Q psy15216 33 HIYGWTAEKAIEKARNEVAQLIYADPR----------EIIWTSGATESNNLAIKGAAHFYK---------------KRGK 87 (2602)
Q Consensus 33 ~~~~~~~~~~~~~~r~~lA~~~g~~~~----------~Iv~t~g~T~al~~~~~~l~~~~~---------------~~gd 87 (2602)
+..+.....+.+++.+++++++|.+.. ..++|+|+|+|+..++.+...... .+++
T Consensus 110 ~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 189 (481)
T 4e1o_A 110 WASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARL 189 (481)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTE
T ss_pred cCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCe
Confidence 444566677888899999999998643 579999999999999988753211 2678
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCC------ceEEEEecccCcccccccHHHHHHH
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD------TILVSVMLVNNEIGVIQPILEIGEL 161 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~------tklv~i~~~~npTG~~~~l~~I~~l 161 (2602)
+|+++..+|+++..++... |++++.+++++++.+|+++|+++|+++ +.+|++++++|+||.+.|+++|+++
T Consensus 190 ~v~~s~~~H~s~~~~~~~~---g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~l 266 (481)
T 4e1o_A 190 VAYASDQAHSSVEKAGLIS---LVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPI 266 (481)
T ss_dssp EEEEETTSCHHHHHHHHHH---TCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHH
T ss_pred EEEEcCcchHHHHHHHHhC---CCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHH
Confidence 9999999999999888766 999999999889999999999999754 7789999999999999999999999
Q ss_pred HHhcCCEEEEeccccccccccc-C----CCC-CccEEEecccc-ccCCCCcEEEEEecCCC--Ccc--cc-eecCCCc--
Q psy15216 162 CRSKGVIFHCDAAQAVGKIDIN-I----QNY-KVDLMSFSAHK-IYGPKGIGALYIRRNPR--TRI--EA-QIHGGGH-- 227 (2602)
Q Consensus 162 a~~~g~~livD~a~a~g~~~~d-l----~~~-~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~--~~l--~~-~~~g~~~-- 227 (2602)
|++||+++|+|+||+.+....+ . ... .+|++++++|| +++|.|+|+++++++.. +.+ .+ ++.....
T Consensus 267 a~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 346 (481)
T 4e1o_A 267 CAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGV 346 (481)
T ss_dssp HHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTT
T ss_pred HHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCC
Confidence 9999999999999987643211 1 111 25999999999 56789999999986421 111 11 1111100
Q ss_pred -----cccccccCcchhHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEccc
Q psy15216 228 -----EYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI 301 (2602)
Q Consensus 228 -----~~~~~~gt~~~~~~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~ 301 (2602)
..... ++.. ....++.++++ +..+++++..++..++++++.+.|.+ .|+++++.++. ..++.|.++..
T Consensus 347 ~~~~~~~~~~-~~r~-~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~~~~~~---~~~v~f~~~~~ 420 (481)
T 4e1o_A 347 ATDFMHWQIP-LSRR-FRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRN-DPSFEIPAKRH---LGLVVFRLKGP 420 (481)
T ss_dssp SCCGGGGSSS-SCCC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CTTEECCSCCC---SSEEEEEESSC
T ss_pred CCCccccccc-CCCC-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCCc---eeEEEEEeCCc
Confidence 00111 1112 23455666666 34567899999999999999999988 78999876543 24555665432
Q ss_pred --ChhHHHHHh--CC-eEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecC-CCCCHHHHHHHHHHHHhh
Q psy15216 302 --EGESLLMAI--KD-IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 302 --~~~~~~~~L--~g-I~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~-~~~t~edid~li~~L~~~ 369 (2602)
...++.+.| +| +.+.++... ...++|+++. +.+|++||++++++|++.
T Consensus 421 ~~~~~~l~~~L~~~g~~~~~~~~~~--------------------g~~~lR~~~~~~~tt~~di~~~~~~i~~~ 474 (481)
T 4e1o_A 421 NSLTENVLKEIAKAGRLFLIPATIQ--------------------DKLIIRFTVTSQFTTRDDILRDWNLIRDA 474 (481)
T ss_dssp HHHHHHHHHHHHHHCSSBCEEEEET--------------------TEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCeEEEEeeEEC--------------------CEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 234555555 34 332222110 1267999976 456899999999999964
No 332
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.85 E-value=2e-21 Score=216.11 Aligned_cols=129 Identities=43% Similarity=0.687 Sum_probs=119.9
Q ss_pred CCceeeeccccccceEEeeccEEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCC
Q psy15216 2401 DDNFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPM 2480 (2602)
Q Consensus 2401 ~~~~~~~d~~~~~~gi~~~~~~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~ 2480 (2602)
+..+.+.|++|++|||++.+|.|.+||+||++||+++++.|+|..|||+.+.|.||||++..+.+|..||+|.|+++||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEEEEEEEcCCccEEEEEEeecCCcEEEEEEecCCCCChHHHhc
Q psy15216 2481 PAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKN 2529 (2602)
Q Consensus 2481 ~~g~~~i~v~f~id~~g~l~V~a~~~~tg~~~~~~i~~~~~l~~~ei~~ 2529 (2602)
|+|.++|+|+|+||.||+|+|+|.++.||++..++|...++||++||++
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~~~Ls~eei~~ 145 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIEN 145 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCCCCCCHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecCccCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999995
No 333
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.85 E-value=3.2e-21 Score=253.92 Aligned_cols=298 Identities=15% Similarity=0.079 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCC-----EEEEc-CCCCcchHHHHHHHH---
Q psy15216 1439 IEKARNEVAQLI------YADPREIIWTSGATESNNLAIKGAAHFYKKRGK-----HIITV-QTEHKSVLDSIRKLE--- 1503 (2602)
Q Consensus 1439 ~~~lr~~ia~~~------g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd-----~Vlv~-~~~~~s~~~~~~~~~--- 1503 (2602)
..++|+++++++ ++++++|++|+|+|+|+++++.++. ++|| +|+++ +|+|+++...+....
T Consensus 77 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~----~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~ 152 (417)
T 3g7q_A 77 KTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFA----GRRADGSTKKVLFPLAPEYIGYADSGLEDDLFV 152 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS----BC----CCBEEEESSCCCHHHHHC-----CCEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHc----CCCccCCcceEEEeCCCccccchhhccchhhhc
Confidence 567888888887 5688899999999999999999987 7877 99998 999998776554331
Q ss_pred hCCcEEEEeccCC-CCCcChhHHHhhccCCceEEEEeccccccccccC---hHHHHHHhhhcCCEEEEecccccCccccc
Q psy15216 1504 NDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKIDIN 1579 (2602)
Q Consensus 1504 ~~G~~v~~v~~~~-~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~~~~ 1579 (2602)
..+..+..++.+. ++.+|+++++ +++++++|++++|+||||.++| +++|.++|++||+++|+|++|+.......
T Consensus 153 ~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~ 230 (417)
T 3g7q_A 153 SARPNIELLPEGQFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGII 230 (417)
T ss_dssp ECCCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCB
T ss_pred cccCcccccCCcccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccc
Confidence 1244555555432 3568999998 7889999999999999999999 88999999999999999999975321111
Q ss_pred -----CCCCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHH--HHHH
Q psy15216 1580 -----IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL--ARIE 1650 (2602)
Q Consensus 1580 -----l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~--~~~~ 1650 (2602)
....+.++++.|+|| ++++| +||++.++++++.+...... . ..+++...+.++..+++. ....
T Consensus 231 ~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~l~~~~~~~~ 302 (417)
T 3g7q_A 231 FSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIANDKTITAIANMNGI------I-SLAPGGMGPAMMCEMIKRNDLLRL 302 (417)
T ss_dssp CSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEECCHHHHHHHHHHHHH------H-CCCCCSHHHHHHHHHHHTTCHHHH
T ss_pred ccccccCCCCCEEEEEechh-ccCCCcceEEEEeCHHHHHHHHHhhcc------e-eeCCCcHHHHHHHHHHcCcchHHH
Confidence 112356788999999 46666 89999887766655443211 1 123444455555455551 1112
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhcCC--cEEEeCCCCCCCCceEEEEEec--CCcHHHHHhc--CCEEEccccccCCCCCC
Q psy15216 1651 MKE-ELKRILFLQKRLYNGLMESIE--EIYINGDMNNRIPHNLNISFNF--IEGESLLMAI--KDIAVSSGSACTSASLE 1723 (2602)
Q Consensus 1651 ~~~-~~~~~~~l~~~l~~~L~~~~~--gl~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~L--~gI~v~~g~~~~~~~~~ 1723 (2602)
..+ ..+++.++++.+.+.|.+.++ ++.+..+.. .....+.++. .+..++...| +||.+++|..|.....
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~- 378 (417)
T 3g7q_A 303 SETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEG---AIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLD- 378 (417)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCB---SSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCc---ceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCc-
Confidence 222 566777778888888876455 356654322 2233344442 3566676666 8999999998865310
Q ss_pred hhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1724 PSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1724 ~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.......+++|||++. +.+++++++++|++.
T Consensus 379 ---------~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~ 409 (417)
T 3g7q_A 379 ---------KPWPHTHQCMRMNYVP--EPDKIEAGVKILAEE 409 (417)
T ss_dssp ---------SCCGGGGGEEEEESCS--CHHHHHHHHHHHHHH
T ss_pred ---------cccccCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 0000113799999985 899999999999974
No 334
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.85 E-value=9e-21 Score=250.66 Aligned_cols=317 Identities=15% Similarity=0.112 Sum_probs=222.8
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHh----CCCCCcEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YADPREIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g~~~~~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
.+.++.+++++.+.++... +++. .+.++ ......++|+++++++ ++++++|++|+|+++++.++ .++.
T Consensus 68 ~~~~~~v~~a~~~~~~~~~-~~~~-~~~y~--~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~l-~~l~--- 139 (432)
T 3ei9_A 68 EPIPEVITSAMAKKAHELS-TIEG-YSGYG--AEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRL-QVMF--- 139 (432)
T ss_dssp SCCCHHHHHHHHHHHHHTT-STTT-CCCCC--CTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHHH---
T ss_pred CCCCHHHHHHHHHHHhccc-ccCC-ccCCC--CCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHHH-HHHc---
Confidence 5788999999999887532 1110 11111 1112467888888886 77888999999999999874 6665
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCC---------cEEEEeccCCC--CCcChhHHHhhccCCceEEEEecccccccc
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDG---------FRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGV 1547 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G---------~~v~~v~~~~~--~~id~d~l~~~i~~~t~lv~l~~~~n~tG~ 1547 (2602)
++||+|++++|.|+++...+..+...| .++++++.+.+ ...|+++ .+++++|++++|+||||.
T Consensus 140 -~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~ 213 (432)
T 3ei9_A 140 -GSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGA 213 (432)
T ss_dssp -CTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCC
T ss_pred -CCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCC
Confidence 799999999999999988888774333 35777777643 3344332 478999999999999999
Q ss_pred ccC---hHHHHHHhhhcCCEEEEecccccCc---ccccCCC----CCccEEEEccccccCCCc--eEEEEEecCCC----
Q psy15216 1548 IQP---ILEIGELCRSKGVIFHCDAAQAVGK---IDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPR---- 1611 (2602)
Q Consensus 1548 ~~~---l~~I~~ia~~~gi~vivD~a~~~g~---~~~~l~~----~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~---- 1611 (2602)
++| +++|+++|++||+++|+|++|+... .+..+.. .+.++++.|+||.+|++| +||++++++.+
T Consensus 214 ~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~ 293 (432)
T 3ei9_A 214 AATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDG 293 (432)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTS
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcch
Confidence 998 6677777999999999999998432 1222211 235688999999888777 89999998762
Q ss_pred ----CccccccccCCccccCCCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCC
Q psy15216 1612 ----TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRI 1686 (2602)
Q Consensus 1612 ----~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~ 1686 (2602)
+.+.... ....++++.+.+.++.+++. ....++++.++++.++++++.+.|.+ . ++.+..+...
T Consensus 294 ~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~-- 362 (432)
T 3ei9_A 294 FPVAKDFNRII-------CTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTS-L-GYDVYGGKNA-- 362 (432)
T ss_dssp CBHHHHHHHHH-------HHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCEEECSSS--
T ss_pred HHHHHHHHHHh-------ccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH-C-CceecCCCcc--
Confidence 2222111 11123456666666656664 33355788889999999999999987 3 6666543221
Q ss_pred CceEEEEEecCCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 1687 PHNLNISFNFIEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 1763 (2602)
Q Consensus 1687 ~~~~~~~~~~~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~ 1763 (2602)
....+.++..+..++...| +||.+++|..|.+. ..+++||++. ++.+++++++++|+
T Consensus 363 -~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~-----------------~~~~iRis~~--~~~e~l~~~l~rl~ 422 (432)
T 3ei9_A 363 -PYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPG-----------------GEGFVRVSAF--GHRENILEACRRFK 422 (432)
T ss_dssp -SEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCGG-----------------GTTEEEEECC--SCHHHHHHHHHHHH
T ss_pred -eEEEEECCCCCHHHHHHHHHHHCCEEEeCchHhCCC-----------------CCCEEEEEec--CCHHHHHHHHHHHH
Confidence 2333444444555665554 49999999887642 1389999974 59999999999999
Q ss_pred H
Q psy15216 1764 M 1764 (2602)
Q Consensus 1764 ~ 1764 (2602)
+
T Consensus 423 ~ 423 (432)
T 3ei9_A 423 Q 423 (432)
T ss_dssp H
T ss_pred H
Confidence 6
No 335
>2qq4_A Iron-sulfur cluster biosynthesis protein ISCU; zinc binding, iron-sulfur cluster binding, three conserved Cys, three beta strands; 1.85A {Thermus thermophilus}
Probab=99.85 E-value=4.2e-22 Score=210.99 Aligned_cols=92 Identities=36% Similarity=0.585 Sum_probs=85.9
Q ss_pred hhhhhhhhhhhhhcCCCCcCcccCCCCcceeeeecCCCCccEEEEEEEEcCCCcEEeeeeeccccchhHhhHHHHHHHHc
Q psy15216 1767 FFMSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSSLVTEWVK 1846 (2602)
Q Consensus 1767 ~~~~y~~~i~dh~~~p~~~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~~~~~i~~~~~~~~gc~~~~a~~s~~~~~~~ 1846 (2602)
+..+|+++|+|||+||||+|.+++++ ++++++||+|||.|+|||+|+ +|+|+|++|+|+||+++||||||+||+++
T Consensus 4 l~~lY~~~Ildh~~nP~n~G~l~~~~---~~~~~~np~CGD~i~l~l~v~-~~~I~d~~f~~~GCais~ASaS~~te~i~ 79 (138)
T 2qq4_A 4 LDELYREILLDHYQSPRNFGVLPQAT---KQAGGMNPSCGDQVEVMVLLE-GDTIADIRFQGQGCAISTASASLMTEAVK 79 (138)
T ss_dssp HHHHHHHHHHHHHHSCTTBSCCTTCS---EEEEEECTTTCCEEEEEEEEE-TTEEEEEEEEEECCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCC---eEEeeCCCCCCCEEEEEEEEC-CCEEEEEEEEecCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999877 899999999999999999995 78999999999999999999999999999
Q ss_pred CCChhhhhcccccchh
Q psy15216 1847 GKTLDEAMSIKNTDIA 1862 (2602)
Q Consensus 1847 g~~~~~~~~i~~~~i~ 1862 (2602)
|||++||..+++....
T Consensus 80 Gkt~~ea~~i~~~~~~ 95 (138)
T 2qq4_A 80 GKKVAEALELSRKFQA 95 (138)
T ss_dssp TSBHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHH
Confidence 9999999999975533
No 336
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.85 E-value=4e-21 Score=253.03 Aligned_cols=336 Identities=18% Similarity=0.205 Sum_probs=229.9
Q ss_pred ccCCCCCCCHHHHHHHHHHHhhcc--CCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1398 FKDATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1398 L~~~~~~~~~~v~eal~~~l~~~~--~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
+..+....++.+.+++.+.+...+ ++|++..+..........+.+++++++++|+++++|++++| |+|+..++.++.
T Consensus 30 l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sG-t~a~~~~~~~~~ 108 (417)
T 3n0l_A 30 MIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSG-SQANQGVYAALI 108 (417)
T ss_dssp CCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHHHHHHHS
T ss_pred eecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcceEeccH-HHHHHHHHHHhc
Confidence 333344568899999988885543 45543233333334456667888999999998767777666 899999999986
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHH--hCCcEEEEeccCCCCCcChhHHHhhcc-CCceEEEEeccccccccccChH
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLE--NDGFRVTYLKPKNNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPIL 1552 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~--~~G~~v~~v~~~~~~~id~d~l~~~i~-~~t~lv~l~~~~n~tG~~~~l~ 1552 (2602)
++||+|++++++|+++........ ..+..++.++.+.++.+|+++|+++++ +++++|++++++| |.+.|++
T Consensus 109 ----~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~l~ 182 (417)
T 3n0l_A 109 ----NPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVIDFA 182 (417)
T ss_dssp ----CTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCCHH
T ss_pred ----CCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCCHH
Confidence 899999999999998765433322 235667777777777899999999998 6899999988775 9999999
Q ss_pred HHHHHhhhcCCEEEEecccccCcc-----cccCCCCCccEEEEcccc-ccCCCceEEEEEe-cCCCCccccccccCCccc
Q psy15216 1553 EIGELCRSKGVIFHCDAAQAVGKI-----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIR-RNPRTRIEAQIHGGGHEY 1625 (2602)
Q Consensus 1553 ~I~~ia~~~gi~vivD~a~~~g~~-----~~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~-~~~~~~l~~~~~g~~~~~ 1625 (2602)
+|.++|++||+++|+|++|+.|.. +..+. ..|++++|+|| +.|++| |+++.+ +++.+.+.+....+
T Consensus 183 ~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~~~~~~~---- 255 (417)
T 3n0l_A 183 KFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP--YAHVVSSTTHKTLRGPRG-GIIMTNDEELAKKINSAIFPG---- 255 (417)
T ss_dssp HHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT--TCSEEEEESSTTTCSCSC-EEEEESCHHHHHHHHHHHTTT----
T ss_pred HHHHHHHHcCCEEEEECccchhhhhcccCCCccc--cceEEEeeCccccCCCCe-eEEEECCHHHHHHHhhhhCCc----
Confidence 999999999999999999876654 22222 46899999999 557775 999998 45555554433211
Q ss_pred cCCCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--CCcHHH
Q psy15216 1626 GLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESL 1702 (2602)
Q Consensus 1626 ~~~~gt~~~~~~~al~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--~~~~~~ 1702 (2602)
..++++...+.++..++.. ...+++...++..++++++.+.|.+ .++.+..... ......+.+.. .+...+
T Consensus 256 --~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 329 (417)
T 3n0l_A 256 --IQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD--RKFKLVSDGT--DNHLVLMSFLDREFSGKDA 329 (417)
T ss_dssp --TCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSC--SSSEEEEECTTSSSCHHHH
T ss_pred --ccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--CCceeccCCC--CceEEEEEcccCCCCHHHH
Confidence 2356677777777777764 3356788889999999999999987 5777764211 12333344432 244555
Q ss_pred HHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCC----CCHHHHHHHHHHHHHhh
Q psy15216 1703 LMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEIDFTIKLLKMKE 1766 (2602)
Q Consensus 1703 ~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~----~t~edid~li~~L~~~~ 1766 (2602)
...| +||.++++..+... ......+.+|+++... .+++++++++++|++..
T Consensus 330 ~~~l~~~gi~v~~~~~~~~~-------------~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l 386 (417)
T 3n0l_A 330 DLALGNAGITANKNTVPGEI-------------RSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADIL 386 (417)
T ss_dssp HHHHHHTTEECEECCCTTCC-------------SCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCeEEeccccCCCC-------------cccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 5555 79998865433221 0011236799987543 46899999999998853
No 337
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.85 E-value=3e-21 Score=222.96 Aligned_cols=127 Identities=48% Similarity=0.718 Sum_probs=122.9
Q ss_pred eeeeccccccceEEeeccEEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCCCCC
Q psy15216 2404 FLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAG 2483 (2602)
Q Consensus 2404 ~~~~d~~~~~~gi~~~~~~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g 2483 (2602)
+++.|++|+||||++.+|.|.+||+|||+||+++++.|+|..|||+.+.|.||||++..+.+|..||+|.|+|+||+|+|
T Consensus 1 ~~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G 80 (219)
T 4e81_A 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG 80 (219)
T ss_dssp CCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTT
T ss_pred CeEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEEcCCccEEEEEEeecCCcEEEEEEecCCCCChHHHhcc
Q psy15216 2484 RARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKNG 2530 (2602)
Q Consensus 2484 ~~~i~v~f~id~~g~l~V~a~~~~tg~~~~~~i~~~~~l~~~ei~~~ 2530 (2602)
.++|+|+|+||.||+|+|+|.++.||++..++|...++||++||++.
T Consensus 81 ~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~Ls~eeI~~m 127 (219)
T 4e81_A 81 MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKM 127 (219)
T ss_dssp CSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTCSCCHHHHHHH
T ss_pred CceEEEEEEeCCCCCEeeeeeccccCccceEeeeccccccHHHHHHH
Confidence 99999999999999999999999999999999999888999999953
No 338
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.85 E-value=3.7e-21 Score=252.54 Aligned_cols=335 Identities=16% Similarity=0.140 Sum_probs=234.5
Q ss_pred eccCCCCCCCHHHHHHHHHHHhh--ccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhh
Q psy15216 1397 VFKDATTPIDPRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGA 1474 (2602)
Q Consensus 1397 ~L~~~~~~~~~~v~eal~~~l~~--~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l 1474 (2602)
.+..+..+.++.+.+++.+.+.. ..++|+...+..........+.+|+++++++|+++++++++ ++|+|+..++.++
T Consensus 27 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~-sGt~a~~~~~~~~ 105 (407)
T 2dkj_A 27 ELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPH-SGSQANMAVYMAL 105 (407)
T ss_dssp ECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCS-SHHHHHHHHHHHH
T ss_pred eeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcceEEec-chHHHHHHHHHHh
Confidence 34334445588999999998864 23445431111111112233346789999999875445444 5567999999988
Q ss_pred hhhhccCCCEEEEcCCCCcchH---HHHHHHHhCCc--EEEEeccCC-CCCcChhHHHhhccC-CceEEEEecccccccc
Q psy15216 1475 AHFYKKRGKHIITVQTEHKSVL---DSIRKLENDGF--RVTYLKPKN-NGLITLSQLEEKICS-DTILVSVMLVNNEIGV 1547 (2602)
Q Consensus 1475 ~~~~~~~gd~Vlv~~~~~~s~~---~~~~~~~~~G~--~v~~v~~~~-~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~ 1547 (2602)
. ++||+|++++++|+++. ..+... |. .++.+++++ ++.+|+++|++++++ ++++|++++|+|| .
T Consensus 106 ~----~~gd~Vl~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~ 176 (407)
T 2dkj_A 106 M----EPGDTLMGMDLAAGGHLTHGSRVNFS---GKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--R 176 (407)
T ss_dssp C----CTTCEEEEECGGGTCCGGGTCTTSHH---HHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--S
T ss_pred c----CCCCEEEEecccccCccchHHHHHhc---CceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--C
Confidence 6 79999999999999984 333333 44 455555453 677999999999985 8999999889886 7
Q ss_pred ccChHHHHHHhhhcCCEEEEecccccCcccccCCC---CCccEEEEcccc-ccCCCceEEEEEe-cCCCCccccccccCC
Q psy15216 1548 IQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQN---YKVDLMSFSAHK-IYGPKGIGALYIR-RNPRTRIEAQIHGGG 1622 (2602)
Q Consensus 1548 ~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~---~~~D~~v~S~~K-~~gp~G~G~l~~~-~~~~~~l~~~~~g~~ 1622 (2602)
..|+++|.++|++||+++|+|++|+.|....+... ..+|++++|+|| +.|++| |+++++ +++++.+.+...
T Consensus 177 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~--- 252 (407)
T 2dkj_A 177 FWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLIF--- 252 (407)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHT---
T ss_pred CCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhhc---
Confidence 78999999999999999999999987554332211 137999999999 557886 999998 566666654332
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--CCc
Q psy15216 1623 HEYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEG 1699 (2602)
Q Consensus 1623 ~~~~~~~gt~~~~~~~al~~aL~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--~~~ 1699 (2602)
.+..++++...+.++.++++.. ..++++..++..++++++.+.|.+ . ++.+..++. ...+..+.++. .+.
T Consensus 253 ---~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~--~~~~~~~~~~~~~~~~ 325 (407)
T 2dkj_A 253 ---PGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELAR-R-GYRIVTGGT--DNHLFLVDLRPKGLTG 325 (407)
T ss_dssp ---TTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEGGGSC--SSSEEEEECGGGTCCH
T ss_pred ---ccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh-C-CceeecCCC--CceEEEEECcccCCCH
Confidence 1234567777777777888864 356788999999999999999988 4 777764322 23444455543 245
Q ss_pred HHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCC----CCHHHHHHHHHHHHHh
Q psy15216 1700 ESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1700 ~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~----~t~edid~li~~L~~~ 1765 (2602)
..+...| +||.++++..+... .+ ....+++|++++.+ .|++|+++++++|++.
T Consensus 326 ~~~~~~l~~~gi~v~~~~~~~~~----------~~---~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 384 (407)
T 2dkj_A 326 KEAEERLDAVGITVNKNAIPFDP----------KP---PRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRA 384 (407)
T ss_dssp HHHHHHHHHTTEECEECCCTTCS----------SC---TTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHcCceecCCcCcccc----------cc---ccCCCceeeecccccccCCCHHHHHHHHHHHHHH
Confidence 5666666 79999987643110 00 00137899998653 6899999999999974
No 339
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.85 E-value=2.8e-21 Score=212.22 Aligned_cols=133 Identities=38% Similarity=0.615 Sum_probs=124.6
Q ss_pred eeccccccceEeeeccEEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCCCCCcc
Q psy15216 1010 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 1089 (2602)
Q Consensus 1010 ~~dv~~~~~gi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~ 1089 (2602)
+.|++|++||+++.+|.|.+||+||++||+++++.|+|..|||+.+.|.||||++..+.+|..||+|.|+|+||.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEECCCeeEEEEEEEecCCceEEEEEecCC-CCCHHHHHhhhhccccCCCc
Q psy15216 1090 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFY-NMNLDEIKNGAIFNENSGIS 1144 (2602)
Q Consensus 1090 ~i~v~f~~d~~g~l~v~a~~~~~g~~~~~~~~~~~-~l~~~~i~~~~~~~~~~g~~ 1144 (2602)
+|+|+|+||.||+|+|+|.+..||++..++|.... +||++||++++ ++++.+.
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~--~~~~~~~ 135 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMI--NDADKFA 135 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHH--HHHHHTH
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHH--HHHHHhH
Confidence 99999999999999999999999999999999884 59999999986 5544443
No 340
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.85 E-value=6.1e-21 Score=247.64 Aligned_cols=304 Identities=14% Similarity=0.065 Sum_probs=212.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHH-HhCCcEEEEec
Q psy15216 1435 AEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLK 1513 (2602)
Q Consensus 1435 ~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~ 1513 (2602)
......++++++++++|.+ ++++++|+++|++.++.++. ++||+|+++.+.|+++...+... ...|.++++++
T Consensus 64 ~~~~~~~l~~~la~~~g~~--~~~~~~sGt~A~~~al~~~~----~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 137 (392)
T 3qhx_A 64 GNPTRTALEAALAAVEDAA--FGRAFSSGMAAADCALRAML----RPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVA 137 (392)
T ss_dssp CCHHHHHHHHHHHHHTTCS--EEEEESSHHHHHHHHHHHHC----CTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred CChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeC
Confidence 3456789999999999975 78999999999999999886 89999999999999887766433 55699999998
Q ss_pred cCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccc
Q psy15216 1514 PKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAH 1593 (2602)
Q Consensus 1514 ~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~ 1593 (2602)
.+ |+++++++++++|++|++++|+||||.+.|+++|.++|++||+++|+|++|+.+... ....+++|+++.|+|
T Consensus 138 ~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~-~~~~~~~di~~~S~s 211 (392)
T 3qhx_A 138 LA-----DLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQ-QPLSLGADVVLHSTT 211 (392)
T ss_dssp TT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-CGGGGTCSEEEEETT
T ss_pred CC-----CHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccC-ChHHhCCcEEEEcCc
Confidence 65 899999999999999999999999999999999999999999999999999876432 233567899999999
Q ss_pred cccCCCc---eEEEEEec-CCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 1594 KIYGPKG---IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGL 1669 (2602)
Q Consensus 1594 K~~gp~G---~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L 1669 (2602)
|++|++| +|+++.++ ++.+.+...... ...+.+....+++..+++. +....++..++++++.+.|
T Consensus 212 K~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~-------~g~~~~~~~~~~~~~~l~~----l~~~~~~~~~~~~~l~~~L 280 (392)
T 3qhx_A 212 KYIGGHSDVVGGALVTNDEELDQSFAFLQNG-------AGAVPGPFDAYLTMRGLKT----LVLRMQRHSENAAAVAEFL 280 (392)
T ss_dssp TTTTCSSCCCCEEEEESCHHHHHHHHHHHHH-------HCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCceEEEEEECcHHHHHHHHHHHHh-------cCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHHHHHHHHH
Confidence 9887766 79999874 444444322110 1122333333333233332 3444566677777888888
Q ss_pred hhcCCcEEEe-CCC--C-----------CCCCceEEEEEec--CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHc
Q psy15216 1670 MESIEEIYIN-GDM--N-----------NRIPHNLNISFNF--IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRAL 1731 (2602)
Q Consensus 1670 ~~~~~gl~i~-~~~--~-----------~~~~~~~~~~~~~--~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~ 1731 (2602)
.+ .+.+... .+. . ...+.+..|.+++ .....++..| .++.++.|..|.............+
T Consensus 281 ~~-~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~ 359 (392)
T 3qhx_A 281 AE-HPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHAST 359 (392)
T ss_dssp HT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGG
T ss_pred hc-CCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCccccccccc
Confidence 76 6766432 221 1 1124456666654 3345666666 5778887876542100000000000
Q ss_pred CC-CccccCCeEEEecCCCCCHHHHHHHHHHH
Q psy15216 1732 GC-NDELAHSSIRFTIGRFTTEKEIDFTIKLL 1762 (2602)
Q Consensus 1732 ~~-~~~~~~~~iRls~~~~~t~edid~li~~L 1762 (2602)
.. ......+.||||++..+++++++.+.++|
T Consensus 360 ~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 360 AGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp BTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 00 11123588999999999999998888876
No 341
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.85 E-value=4.6e-21 Score=253.27 Aligned_cols=291 Identities=14% Similarity=0.095 Sum_probs=220.2
Q ss_pred HHHHHHHHHHHh-----CCCCCc---EEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEE
Q psy15216 43 IEKARNEVAQLI-----YADPRE---IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVT 114 (2602)
Q Consensus 43 ~~~~r~~lA~~~-----g~~~~~---Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~ 114 (2602)
..++|+.+++++ ++++++ |++|+|+++|+++++.++. ++||+|+++.|.|+++...+.. +.|++++
T Consensus 90 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~~--~~g~~~~ 163 (430)
T 2x5f_A 90 IEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFV----NQDDTILLPEHNWGNYKLVFNT--RNGANLQ 163 (430)
T ss_dssp CHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHC----CTTCEEEEESSCCTHHHHHHTT--TTCCEEE
T ss_pred CHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHh----CCCCEEEEcCCcCccHHHHHHH--hcCCeEE
Confidence 467888899888 888888 9999999999999999987 7999999999999997655543 1599999
Q ss_pred EeccCC-CCccChHHHHhhccC---CceEEEEecccCccccccc---HHHHHHHHHh-----cCCEEEEecccccccc--
Q psy15216 115 YLKPKN-NGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQP---ILEIGELCRS-----KGVIFHCDAAQAVGKI-- 180 (2602)
Q Consensus 115 ~v~~~~-~~~ld~e~l~~~i~~---~tklv~i~~~~npTG~~~~---l~~I~~la~~-----~g~~livD~a~a~g~~-- 180 (2602)
.++.++ ++.+|+++|++++++ +++++++++|+||||.++| +++|.++|++ ||+++|+|++|+....
T Consensus 164 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~ 243 (430)
T 2x5f_A 164 TYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYED 243 (430)
T ss_dssp EECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSS
T ss_pred EEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCc
Confidence 999865 467999999999976 8999999999999999999 8889999999 9999999999874321
Q ss_pred ----cc--cCCC-CCc---cEEEeccccccCCCC--cEEEEE---ecCCCCcccceecCCCccccccccCcchhHHHHHH
Q psy15216 181 ----DI--NIQN-YKV---DLMSFSAHKIYGPKG--IGALYI---RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMG 245 (2602)
Q Consensus 181 ----~~--dl~~-~~~---D~~~~S~~K~~Gp~G--~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~ 245 (2602)
++ ++.. .+. ++++.|+||.+|++| +||+++ ++++++.+.+..... .+...++++.+...++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~a~~ 320 (430)
T 2x5f_A 244 VYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGL---IRSNISSGPLPTQSAVK 320 (430)
T ss_dssp SCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHH---HHTTTSSCCHHHHHHHH
T ss_pred ccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhh---hhcccCCCChHHHHHHH
Confidence 11 2322 344 688899999988778 799999 877766665432110 00123467777777777
Q ss_pred HHHH-HH--HHhHHHHHHHHHHHHHHHHHHHhhcc--CceEEeCCCCCCCCceEEEEEcccChhHHHHHh---CCeEEcc
Q psy15216 246 EAFR-LA--RIEMKEELKRILFLQKRLYNGLMESI--EEIYINGDMNNRIPHNLNISFNFIEGESLLMAI---KDIAVSS 317 (2602)
Q Consensus 246 ~al~-~~--~~~~~~~~~~~~~l~~~l~~~L~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L---~gI~v~~ 317 (2602)
++|+ .. ...+++..+++.++++++.+.|.+.. .++.+..+.. +..+.+.++..+..++...| +||.+++
T Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 397 (430)
T 2x5f_A 321 HVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNS---GYFMAIKVHDVDPEALRKHLIDKYSIGVIA 397 (430)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCB---SSEEEEEESSSCHHHHHHHHHHHHCEECEE
T ss_pred HHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCc---eEEEEeCCCCCCHHHHHHHHHHhCCEEEec
Confidence 7776 32 12345588888999999999997311 3677764432 23345556544566676666 5899887
Q ss_pred cccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 318 GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 318 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
| . .+++||+++. ++++++++++++|++.
T Consensus 398 g----~-------------------~~~iRis~~~-~~~e~i~~~~~~l~~~ 425 (430)
T 2x5f_A 398 L----N-------------------ATDIRIAFSC-VEKDDIPHVFDSIAKA 425 (430)
T ss_dssp C----S-------------------SSEEEEEGGG-SCGGGHHHHHHHHHHH
T ss_pred C----C-------------------CCeEEEEEec-CCHHHHHHHHHHHHHH
Confidence 6 1 2789999985 5899999999999864
No 342
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.85 E-value=8e-21 Score=250.63 Aligned_cols=296 Identities=11% Similarity=0.053 Sum_probs=213.1
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCCHHHHH--HHHHHhccccccc--C----------CCEEEEcCCCCcccHHHHHHHH
Q psy15216 42 AIEKARNEVAQLIYADPREIIWTSGATESN--NLAIKGAAHFYKK--R----------GKHIITVQTEHKSVLDSIRKLE 107 (2602)
Q Consensus 42 ~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al--~~~~~~l~~~~~~--~----------gd~Vlv~~~~~~s~~~~~~~~~ 107 (2602)
...++|+++|+++++++++|++|+|+++++ ++++.++. . | ||+|++++|.|+++...++..
T Consensus 79 g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~----~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~- 153 (427)
T 3ppl_A 79 GIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYI----FGNNDSVQPWSKEETVKWICPVPGYDRHFSITERF- 153 (427)
T ss_dssp CCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHH----HCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHT-
T ss_pred CcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHh----ccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHc-
Confidence 457899999999999999999999999999 58888876 4 5 899999999999987766655
Q ss_pred hCCcEEEEeccCCCCccChHHHHhhcc-CCceEEEEe-cccCcccccccHH---HHHHHH-HhcCCEEEEeccccccc--
Q psy15216 108 NDGFRVTYLKPKNNGLITLSQLEEKIC-SDTILVSVM-LVNNEIGVIQPIL---EIGELC-RSKGVIFHCDAAQAVGK-- 179 (2602)
Q Consensus 108 ~~G~~v~~v~~~~~~~ld~e~l~~~i~-~~tklv~i~-~~~npTG~~~~l~---~I~~la-~~~g~~livD~a~a~g~-- 179 (2602)
|++++.+++++++ +|+++|+++++ +++++|+++ +++||||.++|.+ +|+++| ++||+++|+|++|+...
T Consensus 154 --g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~ 230 (427)
T 3ppl_A 154 --GFEMISVPMNEDG-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLT 230 (427)
T ss_dssp --TCEEEEEEEETTE-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSS
T ss_pred --CCEEEEeCCCCCC-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccC
Confidence 9999999988765 99999999995 789988865 8899999999977 788888 99999999999987421
Q ss_pred ----ccccC-------CCCCccEEEeccccccCC-CCcEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHH
Q psy15216 180 ----IDINI-------QNYKVDLMSFSAHKIYGP-KGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEA 247 (2602)
Q Consensus 180 ----~~~dl-------~~~~~D~~~~S~~K~~Gp-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~a 247 (2602)
.++++ ...+.++++.|+||.++| -++||+++++++++.+..... .....++.....++..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~~~-------~~~~~~~~~~q~~~~~~ 303 (427)
T 3ppl_A 231 DEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGHAG-------IRGIGPNKVNQLAHARY 303 (427)
T ss_dssp SCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHH-------HHCSCCCHHHHHHHHHH
T ss_pred CCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHHHhh-------cccCCCCHHHHHHHHHH
Confidence 11121 133567999999996322 238999998877666654321 11223455555555455
Q ss_pred HHH---HHHhHHHHHHHHHHHHHHHHHHHhhccC---ceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcccc
Q psy15216 248 FRL---ARIEMKEELKRILFLQKRLYNGLMESIE---EIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGS 319 (2602)
Q Consensus 248 l~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~ 319 (2602)
++. ...++.+..+++.++++.+.+.|.+.++ ++.+..+.. ..++.+.++..+..++...| +||.++++.
T Consensus 304 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~l~~~gv~v~~~g 380 (427)
T 3ppl_A 304 FGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAG---GYFISLDVVPGTASRVAELAKEAGIALTGAG 380 (427)
T ss_dssp HCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSB---SSCEEEECSTTCHHHHHHHHHHTTEECCCTT
T ss_pred HhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCc---cEEEEEECCcchHHHHHHHHHHCCCEEecCc
Confidence 542 2344566666777777777777654333 466554432 34455566554566666666 799999954
Q ss_pred cCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 320 ACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.|.+. + .....+++||+++.. +++++++++++|++.
T Consensus 381 ~~~~~-----------~--~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~ 416 (427)
T 3ppl_A 381 SSYPL-----------R--QDPENKNLRLAPSLP-PVEELEVAMDGVATC 416 (427)
T ss_dssp TTSGG-----------G--CCTTSCEEEECCSSS-CHHHHHHHHHHHHHH
T ss_pred CcCCC-----------C--CCCCCCeEEEECCCC-CHHHHHHHHHHHHHH
Confidence 44321 0 011248999999754 899999999999864
No 343
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.85 E-value=4.5e-21 Score=252.58 Aligned_cols=333 Identities=18% Similarity=0.211 Sum_probs=229.1
Q ss_pred CCCCCCCHHHHHHHHHHHhhhc--CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccc
Q psy15216 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF 81 (2602)
Q Consensus 4 a~~~~~p~~v~~a~~~~l~~~~--~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~ 81 (2602)
++..+.++.+.+++.+.+...+ ++|+...+..........+.+++++++++|+++++|++++| |+|+.+++.++.
T Consensus 32 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sG-t~a~~~~~~~~~-- 108 (417)
T 3n0l_A 32 ASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSG-SQANQGVYAALI-- 108 (417)
T ss_dssp TTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHHHHHHHS--
T ss_pred cccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcceEeccH-HHHHHHHHHHhc--
Confidence 3445779999999998875443 33432122222233445566888999999998777877776 899999999987
Q ss_pred cccCCCEEEEcCCCCcccHHHHHHH--HhCCcEEEEeccCCCCccChHHHHhhcc-CCceEEEEecccCcccccccHHHH
Q psy15216 82 YKKRGKHIITVQTEHKSVLDSIRKL--ENDGFRVTYLKPKNNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEI 158 (2602)
Q Consensus 82 ~~~~gd~Vlv~~~~~~s~~~~~~~~--~~~G~~v~~v~~~~~~~ld~e~l~~~i~-~~tklv~i~~~~npTG~~~~l~~I 158 (2602)
++||+|+++.++|+++...+..+ ...+..++.++++.++.+|+++|+++++ +++++|++++++| |...|+++|
T Consensus 109 --~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i 184 (417)
T 3n0l_A 109 --NPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVIDFAKF 184 (417)
T ss_dssp --CTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCCHHHH
T ss_pred --CCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCCHHHH
Confidence 89999999999999876543332 2235667777777778899999999998 6899999888775 999999999
Q ss_pred HHHHHhcCCEEEEecccccccc-----cccCCCCCccEEEecccc-ccCCCCcEEEEEe-cCCCCcccceecCCCccccc
Q psy15216 159 GELCRSKGVIFHCDAAQAVGKI-----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIR-RNPRTRIEAQIHGGGHEYGL 231 (2602)
Q Consensus 159 ~~la~~~g~~livD~a~a~g~~-----~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~-~~~~~~l~~~~~g~~~~~~~ 231 (2602)
.++|++||+++|+|++|+.|.. +..+. +.|++++|+|| +.|++| |+++++ +++.+.+.+....+
T Consensus 185 ~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~~~~~~~------ 255 (417)
T 3n0l_A 185 REIADEIGAYLFADIAHIAGLVVAGEHPSPFP--YAHVVSSTTHKTLRGPRG-GIIMTNDEELAKKINSAIFPG------ 255 (417)
T ss_dssp HHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT--TCSEEEEESSTTTCSCSC-EEEEESCHHHHHHHHHHHTTT------
T ss_pred HHHHHHcCCEEEEECccchhhhhcccCCCccc--cceEEEeeCccccCCCCe-eEEEECCHHHHHHHhhhhCCc------
Confidence 9999999999999999876543 22222 46899999999 546775 999998 56666665443211
Q ss_pred cccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--cChhHHHH
Q psy15216 232 RSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESLLM 308 (2602)
Q Consensus 232 ~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~ 308 (2602)
..++++...+.++.+++.. ...++++..++..++++++.+.|.+ .++.+..... ..+...+.+.. .+...+..
T Consensus 256 ~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 331 (417)
T 3n0l_A 256 IQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD--RKFKLVSDGT--DNHLVLMSFLDREFSGKDADL 331 (417)
T ss_dssp TCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSC--SSSEEEEECTTSSSCHHHHHH
T ss_pred ccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--CCceeccCCC--CceEEEEEcccCCCCHHHHHH
Confidence 2356777777777777764 2355688889999999999999987 6787765222 22344444432 24555655
Q ss_pred Hh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCC----CCHHHHHHHHHHHHhh
Q psy15216 309 AI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 309 ~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~----~t~edid~li~~L~~~ 369 (2602)
.| +||.+++....... .+......+|+++... .+++|+++++++|++.
T Consensus 332 ~l~~~gi~v~~~~~~~~~-------------~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~ 385 (417)
T 3n0l_A 332 ALGNAGITANKNTVPGEI-------------RSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADI 385 (417)
T ss_dssp HHHHTTEECEECCCTTCC-------------SCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHcCeEEeccccCCCC-------------cccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHH
Confidence 55 69998865422110 0111236799987532 4689999999999874
No 344
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.85 E-value=3.1e-21 Score=252.24 Aligned_cols=306 Identities=17% Similarity=0.188 Sum_probs=203.1
Q ss_pred eEEEEEcCcccEEEEEEECCeEEEEeCCCCCccccEEEEEecCC-----------------cEEecHHHHhhhccCCCCc
Q psy15216 2034 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDG-----------------KIYVGKKAKITQNIDPKNT 2096 (2602)
Q Consensus 2034 ~vvGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~-----------------~~~vG~~A~~~~~~~p~~~ 2096 (2602)
..|+||+||+++.+++..++.|.. .+||+|+...+. ..+||++|... |.
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~--------~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~----~~-- 71 (418)
T 1k8k_A 6 PACVVDCGTGYTKLGYAGNTEPQF--------IIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK----PT-- 71 (418)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSE--------EEESCEEECC-----------CCCTTGGGCEEEGGGGTSC----TT--
T ss_pred CeEEEECCCCeEEEeeCCCCCCCC--------cCCceEEEECcccccccccccccccccccCeEEChHHHhc----CC--
Confidence 469999999999999875555532 356666654321 25666666432 10
Q ss_pred hhhhhhhcCCCCCCCCCCCCCeeeecCCCceEEEecCceeCHHHHHHHHHHHHHHHHHHhhccc--cceEEEeeCCCCCH
Q psy15216 2097 ISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNR--IFGAVITVPAYFND 2174 (2602)
Q Consensus 2097 ~~~~K~~lg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~--~~~~ViTVPa~f~~ 2174 (2602)
..+++-| ..+.+.--+....+++++.. +.++.. ...+|||+|++|+.
T Consensus 72 -~~~~~pi---------------------------~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~ 120 (418)
T 1k8k_A 72 -YATKWPI---------------------------RHGIVEDWDLMERFMEQVIF---KYLRAEPEDHYFLLTEPPLNTP 120 (418)
T ss_dssp -SEEECCE---------------------------ETTEESCHHHHHHHHHHHHH---TTTCCCGGGCCEEEEECTTCCH
T ss_pred -CEEeccc---------------------------cCCEECCHHHHHHHHHHHHH---hccCCCCCCCcEEEEeCCCCCH
Confidence 1111111 11112212233444444432 234432 34799999999999
Q ss_pred HHHHHHHHHH-HHcCCceeEeechhHHHHHH-hhhc-cCCCCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCch
Q psy15216 2175 IQRQFTKNAA-KLAGLNVLRLLNEPTSAAIA-YKLD-KNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGG 2251 (2602)
Q Consensus 2175 ~qr~~l~~Aa-~~AGl~~~~li~EP~AAAl~-y~~~-~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG 2251 (2602)
.+|++|.+++ +.+|++.+.+++||+||+++ |... ....+.+.+|+|+||||||++++. ++. .+....++..+||
T Consensus 121 ~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~--~G~-~~~~~~~~~~lGG 197 (418)
T 1k8k_A 121 ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA--EGY-VIGSCIKHIPIAG 197 (418)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE--TTE-ECGGGCEEESCSH
T ss_pred HHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE--CCE-EcccceEEEeCcH
Confidence 9999999999 88999999999999999987 4211 011122679999999999999985 443 2333335679999
Q ss_pred hHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHhcccc-----------------eEEEEEEe-cCCceEEEEcC
Q psy15216 2252 DDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQS-----------------SVKLNVKL-SDKKIVNITID 2313 (2602)
Q Consensus 2252 ~~~D~~l~~~l~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~-----------------~~~~~i~~-~~~~~~~~~it 2313 (2602)
+++|+.|.+++.+++. . .... .-...+|++|+.++... ...+.++- ..+....++++
T Consensus 198 ~~lt~~l~~~l~~~~~-~-~~~~---~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~ 272 (418)
T 1k8k_A 198 RDITYFIQQLLRDREV-G-IPPE---QSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVG 272 (418)
T ss_dssp HHHHHHHHHHHHTTCC-C-CCGG---GHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHhcCC-C-CCCH---HHHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCCCCCCcccEEEeC
Confidence 9999999999986521 1 1111 11256778888775421 12344442 22345678999
Q ss_pred HHHH---HHHHHHHH------HHHHHHHHHHHHHcCC--CccccceEEEEeCccchHHHHHHHHhhcCC-----------
Q psy15216 2314 MKQF---FTITQHLV------NRTILLSSKALMDANL--TIKDINNVILVGGSTRMKHIHEGVSNFFKT----------- 2371 (2602)
Q Consensus 2314 r~~f---e~l~~~~~------~~~~~~i~~~l~~~~~--~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~----------- 2371 (2602)
+++| |.+++|.+ ..+.++|.++|+.+.. ....++.|+|+||+|++|.++++|++.++.
T Consensus 273 ~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~ 352 (418)
T 1k8k_A 273 YERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEE 352 (418)
T ss_dssp THHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccc
Confidence 9999 66666643 5688889999998753 345578899999999999999999876531
Q ss_pred -------------cccCCCCccchhhhHHHHHhH
Q psy15216 2372 -------------TLLTSIDPDKAVVFGAAIQAN 2392 (2602)
Q Consensus 2372 -------------~~~~~~~p~~aVa~GAa~~a~ 2392 (2602)
++..+.+|..++.+||+++|.
T Consensus 353 ~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 353 LSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp HC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred cccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 234456888999999999986
No 345
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.85 E-value=5e-21 Score=245.35 Aligned_cols=313 Identities=15% Similarity=0.166 Sum_probs=210.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
|+++.++++++.+.+++.+.+.. . .. +...+...++|+++|+++|.+ ++++++|+|+|+.+++.++.
T Consensus 8 ~~~~~~~~p~~~~~~a~~~~~~~-----~---~~--y~~~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~~~~~~~- 74 (347)
T 1jg8_A 8 LRSDTVTKPTEEMRKAMAQAEVG-----D---DV--YGEDPTINELERLAAETFGKE--AALFVPSGTMGNQVSIMAHT- 74 (347)
T ss_dssp CSCGGGCCCCHHHHHHHHTCCCC-----C---GG--GTCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHC-
T ss_pred eccccCCCCCHHHHHHHhcCCCC-----C---cc--cCCChHHHHHHHHHHHHhCCc--eEEEecCcHHHHHHHHHHhc-
Confidence 56667777788888877654211 0 11 111235678999999999975 67889999999999988876
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccC------CceEEEEecccCcc-cccc
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEI-GVIQ 153 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~------~tklv~i~~~~npT-G~~~ 153 (2602)
++||+|++++++|++.......+...|++++.+ .++++.+|+++|++++++ +|++|++++|+||| |.++
T Consensus 75 ---~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~ 150 (347)
T 1jg8_A 75 ---QRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVV 150 (347)
T ss_dssp ---CTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCC
T ss_pred ---CCCCEEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccC
Confidence 799999999999977443222334459999988 555677899999999975 68999999999999 9998
Q ss_pred cH---HHHHHHHHhcCCEEEEeccccccc---ccccCCC--CCccEEEeccccccCCCCcE-EEEEecCCCCcccceecC
Q psy15216 154 PI---LEIGELCRSKGVIFHCDAAQAVGK---IDINIQN--YKVDLMSFSAHKIYGPKGIG-ALYIRRNPRTRIEAQIHG 224 (2602)
Q Consensus 154 ~l---~~I~~la~~~g~~livD~a~a~g~---~~~dl~~--~~~D~~~~S~~K~~Gp~G~G-~l~~~~~~~~~l~~~~~g 224 (2602)
|. ++|.++|++||+++++|++|..+. .+.+... .+.|.+++|+||++|++ .| +++.++++++.+.+....
T Consensus 151 ~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~-~G~~~~~~~~~~~~~~~~~~~ 229 (347)
T 1jg8_A 151 PLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAP-VGSVVVGDRDFIERARKARKM 229 (347)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCS-SCEEEEECHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCC-ceEEEEcCHHHHHHHHHHHHH
Confidence 85 578899999999999999985532 1122211 24688888999977644 45 566676666555432211
Q ss_pred CCccccccccCc--chhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc--c
Q psy15216 225 GGHEYGLRSGTL--ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--F 300 (2602)
Q Consensus 225 ~~~~~~~~~gt~--~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~--~ 300 (2602)
+ .++. +....++...+++. ..+. .++..++++++.+.|.+ . ++.+..++. ..+++.+.++ .
T Consensus 230 ~-------~~~~~~~~~~~~~~~~~l~~---~~~~-~~~~~~~~~~l~~~L~~-~-~~~~~~~~~--~~~~~~~~~~~~~ 294 (347)
T 1jg8_A 230 L-------GGGMRQAGVLAAAGIIALTK---MVDR-LKEDHENARFLALKLKE-I-GYSVNPEDV--KTNMVILRTDNLK 294 (347)
T ss_dssp H-------TCCCSSTHHHHHHHHHHHHH---SSTT-HHHHHHHHHHHHHHHHH-H-TCBCCGGGC--CSSEEEEECTTSS
T ss_pred c-------CCchhHHHHHHHHHHHHHHH---HHHH-HHHHHHHHHHHHHHHHh-c-CceeccCCC--cceEEEEEccccc
Confidence 0 1111 11122222234432 1122 22334566778888876 3 555421111 1234445555 2
Q ss_pred cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 301 IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 301 ~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.+..++.+.| +||.++++. .+++|++++.+++++|+++++++|++.
T Consensus 295 ~~~~~~~~~l~~~gi~v~~~~-----------------------~~~iRl~~~~~~~~e~i~~~~~~l~~~ 342 (347)
T 1jg8_A 295 VNAHGFIEALRNSGVLANAVS-----------------------DTEIRLVTHKDVSRNDIEEALNIFEKL 342 (347)
T ss_dssp SCHHHHHHHHHHHTEECEEEE-----------------------TTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEecCC-----------------------CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4566777776 688887531 167999999999999999999999864
No 346
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.85 E-value=1.9e-20 Score=247.47 Aligned_cols=334 Identities=13% Similarity=0.145 Sum_probs=223.5
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhh-----hh
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH-----FY 1478 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~-----~~ 1478 (2602)
..++++++++.+.+...+.+++ ....++|+.+++++|.+ ++++++|+|+|+++++.++.. ..
T Consensus 40 ~~~~~~~~a~~~~~~~~~~~~~-----------~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~al~~l~~~~~~~~~ 106 (437)
T 3bb8_A 40 VIGTKELQLMVEASLDGWLTTG-----------RFNDAFEKKLGEYLGVP--YVLTTTSGSSANLLALTALTSPKLGVRA 106 (437)
T ss_dssp CCCHHHHHHHHHHHHHCCCBSC-----------HHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCGGGGGGS
T ss_pred CCCHHHHHHHHHHHHcCCcCCC-----------hHHHHHHHHHHHHHCCC--cEEEeCCHHHHHHHHHHHhhhccccccc
Confidence 4567888999888865322222 24688999999999976 788999999999999998720 01
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHH
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGEL 1557 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~i 1557 (2602)
+++||+|+++.++|+++...+... |+++++++.++ ++.+|+++++++++++|++|+++| ++|...|+++|.++
T Consensus 107 ~~~gd~Vi~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l 180 (437)
T 3bb8_A 107 LKPGDEVITVAAGFPTTVNPTIQN---GLIPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIAH---TLGNLFDLAEVRRV 180 (437)
T ss_dssp CCTTCEEEECSSSCHHHHHHHHHT---TCEEEECCEETTTTEECGGGHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHH
T ss_pred CCCcCEEEECCCCcHHHHHHHHHc---CCEEEEEeccCccCCcCHHHHHHhcCCCCeEEEEeC---CCCChhcHHHHHHH
Confidence 378999999999999998877654 99999999876 688999999999999999999986 47778999999999
Q ss_pred hhhcCCEEEEecccccCcccccCCCCC--ccEEEEcccc---ccCCCceEEEEEecCCCCccccccccCCc---------
Q psy15216 1558 CRSKGVIFHCDAAQAVGKIDINIQNYK--VDLMSFSAHK---IYGPKGIGALYIRRNPRTRIEAQIHGGGH--------- 1623 (2602)
Q Consensus 1558 a~~~gi~vivD~a~~~g~~~~~l~~~~--~D~~v~S~~K---~~gp~G~G~l~~~~~~~~~l~~~~~g~~~--------- 1623 (2602)
|++||+++|+|++|+.|... +...++ .|++++||+| +.|+. +|+++.+++.+..+.+...+++.
T Consensus 181 ~~~~~~~li~D~a~~~g~~~-~~~~~~~~~d~~~~s~~~~k~l~~g~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (437)
T 3bb8_A 181 ADKYNLWLIEDCCDALGSTY-DGKMAGTFGDIGTVSFYPAKHITMGE-GGAVFTQSAELKSIIESFRDWGRDCYCAPGCD 258 (437)
T ss_dssp HHHHTCEEEEECTTCTTCEE-TTEETTSSSSEEEEECSTTSSSCCSS-CEEEEESCHHHHHHHHHHHBTTBCC-------
T ss_pred HHHcCCEEEEECccccCceE-CCeecccccCEEEEECcCCcCCCCCC-eEEEEeCCHHHHHHHHHHHHhCcccccccccc
Confidence 99999999999999988765 444445 7888888755 43344 48888875543322111111100
Q ss_pred --------------cccC-CCC----------CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEE
Q psy15216 1624 --------------EYGL-RSG----------TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYI 1678 (2602)
Q Consensus 1624 --------------~~~~-~~g----------t~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i 1678 (2602)
+.++ +.+ +.+....+++ ++|+ .+++..++.+++++++.+.|.+ ++++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l-~~l~----~~~~~~~~~~~~~~~l~~~L~~-~~g~~~ 332 (437)
T 3bb8_A 259 NTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGL-AQLE----RIEEFVEKRKANFKYLKDALQS-CADFIE 332 (437)
T ss_dssp ---------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHH-HHHH----HHHHHHHHHHHHHHHHHHHGGG-GTTTEE
T ss_pred cccccccccccccccccccccccccccCcccCCCHHHHHHHH-HHHH----HHHHHHHHHHHHHHHHHHHhhc-cCCccc
Confidence 0011 111 1222222222 2232 2345566668888999999987 666555
Q ss_pred eCCCC-CCCCc--eEEEEEe---cCCcHHHHHhc--CCEEEccccccCCCCCChhHH------HHHcCCCccccCCeEEE
Q psy15216 1679 NGDMN-NRIPH--NLNISFN---FIEGESLLMAI--KDIAVSSGSACTSASLEPSYV------LRALGCNDELAHSSIRF 1744 (2602)
Q Consensus 1679 ~~~~~-~~~~~--~~~~~~~---~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~iRl 1744 (2602)
.+... ...+. ...+.+. +.+..++...| +||.++.+..... +.+|.+. ...++.......+.|||
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl 411 (437)
T 3bb8_A 333 LPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNL-TRQPYFHDVKYRVVGELTNTDRIMNQTFWI 411 (437)
T ss_dssp CCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSG-GGSGGGSSCCCEECSCCHHHHHHHHHEEEE
T ss_pred cCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCccc-ccCchhhccCccccCCCcHHHHHhcCEEEe
Confidence 43211 11112 2344454 23567777777 7999987654110 0011110 00111112223467999
Q ss_pred ecCCCCCHHHHHHHHHHHHHh
Q psy15216 1745 TIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1745 s~~~~~t~edid~li~~L~~~ 1765 (2602)
+++.++|.+||++++++|++.
T Consensus 412 ~~~~~~t~~di~~i~~~l~~~ 432 (437)
T 3bb8_A 412 GIYPGLTHDHLDYVVSKFEEF 432 (437)
T ss_dssp CCSTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999873
No 347
>2qq4_A Iron-sulfur cluster biosynthesis protein ISCU; zinc binding, iron-sulfur cluster binding, three conserved Cys, three beta strands; 1.85A {Thermus thermophilus}
Probab=99.85 E-value=6.8e-22 Score=209.39 Aligned_cols=90 Identities=36% Similarity=0.596 Sum_probs=84.9
Q ss_pred hhhhhhHhhhhcccCCCCCCCCCCCCCcceeeeeCCCCcccEEEEEEEEcCCCceEeeeeeccccchhHhhHHHHHHHHc
Q psy15216 371 FFMSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSSLVTEWVK 450 (2602)
Q Consensus 371 ~~~~y~~~~~~hy~~p~n~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~~~~~i~~~~~~~~gc~~~~a~~s~~~~~~~ 450 (2602)
+.++|+++++|||+||||+|.+++++ ++++++||+|||.|+|+|+|+ +|+|+|++|+|+||+++|||||++||+++
T Consensus 4 l~~lY~~~Ildh~~nP~n~G~l~~~~---~~~~~~np~CGD~i~l~l~v~-~~~I~d~~f~~~GCais~ASaS~~te~i~ 79 (138)
T 2qq4_A 4 LDELYREILLDHYQSPRNFGVLPQAT---KQAGGMNPSCGDQVEVMVLLE-GDTIADIRFQGQGCAISTASASLMTEAVK 79 (138)
T ss_dssp HHHHHHHHHHHHHHSCTTBSCCTTCS---EEEEEECTTTCCEEEEEEEEE-TTEEEEEEEEEECCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCC---eEEeeCCCCCCCEEEEEEEEC-CCEEEEEEEEecCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999777 889999999999999999994 78999999999999999999999999999
Q ss_pred CCChhhhhhccccc
Q psy15216 451 GKTLDEAMSIKNTD 464 (2602)
Q Consensus 451 g~~~~e~~~i~~~~ 464 (2602)
|||++||..+++..
T Consensus 80 Gkt~~ea~~i~~~~ 93 (138)
T 2qq4_A 80 GKKVAEALELSRKF 93 (138)
T ss_dssp TSBHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 99999999999654
No 348
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.85 E-value=1.9e-20 Score=246.34 Aligned_cols=293 Identities=12% Similarity=0.070 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCCHHHHH--HHHHHhcccccccC------------CCEEEEcCCCCcccHHHHHHHHh
Q psy15216 43 IEKARNEVAQLIYADPREIIWTSGATESN--NLAIKGAAHFYKKR------------GKHIITVQTEHKSVLDSIRKLEN 108 (2602)
Q Consensus 43 ~~~~r~~lA~~~g~~~~~Iv~t~g~T~al--~~~~~~l~~~~~~~------------gd~Vlv~~~~~~s~~~~~~~~~~ 108 (2602)
..++|+++|+++++++++|++|+|+++++ .+++.++. .+ +|+|+++.|.|+++...++..
T Consensus 78 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~----~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~-- 151 (422)
T 3d6k_A 78 IADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYT----WGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHF-- 151 (422)
T ss_dssp CHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHH----HCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHH--
T ss_pred CHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhc----CcccccccccccCCCCEEEEeCCccHHHHHHHHHc--
Confidence 57889999999999999999999999997 67777776 34 458999999999988777766
Q ss_pred CCcEEEEeccCCCCccChHHHHhhccC-CceEEE-EecccCcccccccHH---HHHHHHH-hcCCEEEEeccccc---cc
Q psy15216 109 DGFRVTYLKPKNNGLITLSQLEEKICS-DTILVS-VMLVNNEIGVIQPIL---EIGELCR-SKGVIFHCDAAQAV---GK 179 (2602)
Q Consensus 109 ~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~-i~~~~npTG~~~~l~---~I~~la~-~~g~~livD~a~a~---g~ 179 (2602)
|++++.++.++++ +|+++|++++++ ++++|+ +++|+||||.++|.+ +|+++|+ +||+++|+|++|+. ..
T Consensus 152 -g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~ 229 (422)
T 3d6k_A 152 -GFEMINVPMTDEG-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSD 229 (422)
T ss_dssp -TCEEEEEEEETTE-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSS
T ss_pred -CCEEEecCCCCCC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCC
Confidence 9999999987665 999999999985 789888 799999999999977 7777888 89999999999973 11
Q ss_pred c---cccC-------CCCCccEEEeccccccCCCC--cEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHH
Q psy15216 180 I---DINI-------QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEA 247 (2602)
Q Consensus 180 ~---~~dl-------~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~a 247 (2602)
. ...+ ...+.++++.|+||. +.+| +||+++++++++.+..... ...++++.+...++.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~l~~~l~~~~~-------~~~~~~~~~~q~a~~~~ 301 (422)
T 3d6k_A 230 EFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSKENIEWYASHAN-------VRGIGPNKLNQLAHAQF 301 (422)
T ss_dssp CCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCHHHHHHHHHHHH-------HHCSCCCHHHHHHHHHH
T ss_pred CCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCHHHHHHHHHHHH-------hhcCCCCHHHHHHHHHH
Confidence 1 1112 233467899999997 4445 8999999877666654321 11234566666666667
Q ss_pred HHH---HHHhHHHHHHHHHHHHHHHHHHHhhcc---CceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcc-c
Q psy15216 248 FRL---ARIEMKEELKRILFLQKRLYNGLMESI---EEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSS-G 318 (2602)
Q Consensus 248 l~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~---~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~-g 318 (2602)
|+. ...++++.++++++.++++.+.|.+.+ +++.+..+.. ..++++.++..+...+...+ +||.+++ |
T Consensus 302 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~l~~~gV~v~~~g 378 (422)
T 3d6k_A 302 FGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTG---GYFISVDVVPGTASRVVELAKEAGIALTGAG 378 (422)
T ss_dssp HCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSB---SSCEEEEESTTCHHHHHHHHHHTTEECCCTT
T ss_pred HhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCc---ceEEEEECCCCCHHHHHHHHHHCCeEEEcCc
Confidence 753 124566667777777777777775532 2356554422 23455566543455555555 7999998 4
Q ss_pred ccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 319 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..|..+ . ....+++|||++. ++++++++++++|++.
T Consensus 379 ~~f~~~------------~--~~~~~~iRis~~~-~~~e~i~~~~~~l~~~ 414 (422)
T 3d6k_A 379 SSFPLH------------N--DPNNENIRLAPSL-PPVAELEVAMDGFATC 414 (422)
T ss_dssp TTSGGG------------C--CTTSCEEEECCSS-SCHHHHHHHHHHHHHH
T ss_pred cccCCC------------C--CCCCCeEEEecCC-CCHHHHHHHHHHHHHH
Confidence 445311 0 0113789999987 8999999999999964
No 349
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.85 E-value=4.1e-20 Score=237.75 Aligned_cols=198 Identities=17% Similarity=0.084 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHHcCCceeEeechhHHHHHHhhhccCCCCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCchhHH
Q psy15216 2175 IQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDF 2254 (2602)
Q Consensus 2175 ~qr~~l~~Aa~~AGl~~~~li~EP~AAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~ 2254 (2602)
...+.+.+|++.|||++..++.||.|||++|.... ..+..++|+|+||||||+++++ ++.+.. .++.++||++|
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~-~~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~GG~~i 241 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP-EKDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVGMKHV 241 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH-HHHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCCHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc-cccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccHHHHH
Confidence 46688999999999999999999999999885332 2345789999999999999987 454432 34589999999
Q ss_pred HHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHhccc-----ceEEEEEEecCCceEEEEcCHHHHHHHHHHHHHHHH
Q psy15216 2255 DYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQ-----SSVKLNVKLSDKKIVNITIDMKQFFTITQHLVNRTI 2329 (2602)
Q Consensus 2255 D~~l~~~l~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~-----~~~~~~i~~~~~~~~~~~itr~~fe~l~~~~~~~~~ 2329 (2602)
|+.|...+.. ....||++|+.++.. .+..+.++..++ ....+++|++|+++++|.++++.
T Consensus 242 t~dIa~~l~~--------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~-~~~~~is~~~l~~ii~p~veei~ 306 (419)
T 4a2a_A 242 IKDVSAVLDT--------------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG-NTIKTTTAKKLSVIIHARLREIM 306 (419)
T ss_dssp HHHHHHHHTC--------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS-CSEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCC--------------CHHHHHHHHHHhccCcccCCCCceEEEeecCC-ccceEEcHHHHHHHHHHHHHHHH
Confidence 9999875532 247899999998752 345667765544 35688999999999999999999
Q ss_pred HHHHHHHHHcCC------CccccceEEEEeCccchHHHHHHHHhhcCCccc--C-----C----------CCccchhhhH
Q psy15216 2330 LLSSKALMDANL------TIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL--T-----S----------IDPDKAVVFG 2386 (2602)
Q Consensus 2330 ~~i~~~l~~~~~------~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~--~-----~----------~~p~~aVa~G 2386 (2602)
+.+.+.|+.++. ....++.|+|+||+|++|.+++++++.|+.++. . | .+|..+++.|
T Consensus 307 ~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~G 386 (419)
T 4a2a_A 307 SKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVANDPSFAAAFG 386 (419)
T ss_dssp HHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHHTCGGGHHHHH
T ss_pred HHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCcccccCCchHHHHHH
Confidence 999999999987 345689999999999999999999999987543 2 2 4899999999
Q ss_pred HHHHhHH
Q psy15216 2387 AAIQANF 2393 (2602)
Q Consensus 2387 Aa~~a~~ 2393 (2602)
.++++..
T Consensus 387 l~~~~~~ 393 (419)
T 4a2a_A 387 NVFAVSE 393 (419)
T ss_dssp TTCC---
T ss_pred HHHHHhh
Confidence 9998854
No 350
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.85 E-value=1.7e-20 Score=245.79 Aligned_cols=332 Identities=13% Similarity=0.188 Sum_probs=216.5
Q ss_pred CCCCCCCHHHHHHHHHHHhhhc--CCCCCCCcchhhhH-HHHHHHHHHHHHHHhCCCCCc---EEEeCCHHHHHHHHHHh
Q psy15216 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTA-EKAIEKARNEVAQLIYADPRE---IIWTSGATESNNLAIKG 77 (2602)
Q Consensus 4 a~~~~~p~~v~~a~~~~l~~~~--~~p~~~~~~~~~~~-~~~~~~~r~~lA~~~g~~~~~---Iv~t~g~T~al~~~~~~ 77 (2602)
++..++++.|++++...+.+.+ +||+. .+..|... ..+.+.+++++++++|++++. .++++|+|+|+..++.+
T Consensus 61 as~n~~~~~V~eA~~~~l~~~y~~G~~g~-r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~a 139 (490)
T 2a7v_A 61 ASENFCSRAALEALGSCLNNKYSEGYPGK-RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTA 139 (490)
T ss_dssp TTCCCCCHHHHHHHTSGGGTCCCCC-------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHcCCCccCCCcc-cccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHH
Confidence 4566899999999999887765 56665 22223322 234446779999999998753 46677899999999999
Q ss_pred cccccccCCCEEEEcCCCCcccHHHHH-----HHHhCCc--EEEEeccC-CCCccChHHHHhhcc-CCceEEEEecccCc
Q psy15216 78 AAHFYKKRGKHIITVQTEHKSVLDSIR-----KLENDGF--RVTYLKPK-NNGLITLSQLEEKIC-SDTILVSVMLVNNE 148 (2602)
Q Consensus 78 l~~~~~~~gd~Vlv~~~~~~s~~~~~~-----~~~~~G~--~v~~v~~~-~~~~ld~e~l~~~i~-~~tklv~i~~~~np 148 (2602)
+. +|||+|+++++.|.++..... .+...|. +++.++++ +++.+|+++|++++. .++++|+++.++||
T Consensus 140 l~----~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~ 215 (490)
T 2a7v_A 140 LL----QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA 215 (490)
T ss_dssp HC----CSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC
T ss_pred Hc----CCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC
Confidence 98 899999999999876432111 1111243 34455555 468899999999986 47899988887776
Q ss_pred ccccccHHHHHHHHHhcCCEEEEecccccccc-----cccCCCCCccEEEecccc-ccCCCCcEEEEEecCCC-------
Q psy15216 149 IGVIQPILEIGELCRSKGVIFHCDAAQAVGKI-----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPR------- 215 (2602)
Q Consensus 149 TG~~~~l~~I~~la~~~g~~livD~a~a~g~~-----~~dl~~~~~D~~~~S~~K-~~Gp~G~G~l~~~~~~~------- 215 (2602)
...|+++|.++|++||+++++|++|+.|.. +..+. ++|++++|+|| +.||.| |++++++++.
T Consensus 216 --~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~ 290 (490)
T 2a7v_A 216 --RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTG 290 (490)
T ss_dssp --SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTE
T ss_pred --CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CCCEEEECCcccCccccc-hheeeccchhccccccc
Confidence 567999999999999999999999976532 22222 57999999999 558887 9999987521
Q ss_pred --------CcccceecCCCccccccccCcchhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCC
Q psy15216 216 --------TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDM 286 (2602)
Q Consensus 216 --------~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~ 286 (2602)
+.++..... ...|+|+.+.++++.+|+.... ..+++..++..++++++.+.|.+ .|+.+..+.
T Consensus 291 ~~~~~~l~~~i~~~~~~------g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~--~G~~v~~~~ 362 (490)
T 2a7v_A 291 REIPYTFEDRINFAVFP------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLE--RGYSLVSGG 362 (490)
T ss_dssp EEEECCCHHHHHHHHTT------TTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGS
T ss_pred chhhHHHHHHHHHHhcc------cCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH--cCcEEecCC
Confidence 122211111 1235678888888888887543 45688889999999999999988 488887532
Q ss_pred CCCCCceEEEEEcc--cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec----CCCCCHHH
Q psy15216 287 NNRIPHNLNISFNF--IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI----GRFTTEKE 358 (2602)
Q Consensus 287 ~~~~~~~~~~~~~~--~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~----~~~~t~ed 358 (2602)
.. .+.+.+.+.. .+...+...| .||.+..+..+... .......||++. +...+++|
T Consensus 363 t~--t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~--------------~p~~~~~iRig~~a~t~~g~~~~d 426 (490)
T 2a7v_A 363 TD--NHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDR--------------SAITPGGLRLGAPALTSRQFREDD 426 (490)
T ss_dssp CS--SSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCC--------------CSSSCSEEEEESHHHHHTTCCHHH
T ss_pred CC--CeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCC--------------CCCCCCceEecccccccCCCCHHH
Confidence 21 3445555542 3556666556 79998865322110 001236799965 33468999
Q ss_pred HHHHHHHHHhh
Q psy15216 359 IDFTIKLLKMK 369 (2602)
Q Consensus 359 id~li~~L~~~ 369 (2602)
+++++++|.+.
T Consensus 427 ~~~~~~~i~~~ 437 (490)
T 2a7v_A 427 FRRVVDFIDEG 437 (490)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 351
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.85 E-value=2.3e-20 Score=240.16 Aligned_cols=308 Identities=14% Similarity=0.185 Sum_probs=217.9
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCC
Q psy15216 1403 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 1482 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~g 1482 (2602)
...++.+++++.+.+.. +.. .+ .......++++++++++| .+.++++|+|+|+|+..++.++. ++|
T Consensus 18 ~~~~~~v~~a~~~~~~~---~~~--~~----~~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~~~----~~g 83 (356)
T 1v72_A 18 AGASPEVAQALVKHSSG---QAG--PY----GTDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSAMT----PPW 83 (356)
T ss_dssp CCCCHHHHHHHHHTTSS---CCC--ST----TCSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHTSC----CTT
T ss_pred cCCCHHHHHHHHhhccC---ccc--cc----ccchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHHhc----CCC
Confidence 46678899998876521 111 11 123457889999999999 44459999999999999999876 799
Q ss_pred CEEEEcCCCCcchHHH--HHHHHhC-CcEEEEeccCCCCCcChhHHHh-hccC-------CceEEEEeccccccccccC-
Q psy15216 1483 KHIITVQTEHKSVLDS--IRKLEND-GFRVTYLKPKNNGLITLSQLEE-KICS-------DTILVSVMLVNNEIGVIQP- 1550 (2602)
Q Consensus 1483 d~Vlv~~~~~~s~~~~--~~~~~~~-G~~v~~v~~~~~~~id~d~l~~-~i~~-------~t~lv~l~~~~n~tG~~~~- 1550 (2602)
|+|+++++.|+++... +... . |++++.++.+ ++.+|+++|++ ++++ ++++|++++++| ||.++|
T Consensus 84 d~vi~~~~~~~~~~~~~~~~~~--~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~ 159 (356)
T 1v72_A 84 GNIYCHPASHINNDECGAPEFF--SNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTL 159 (356)
T ss_dssp EEEEECTTSHHHHSSTTHHHHH--TTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCH
T ss_pred CEEEEcCccchhhhhchHHHHH--hCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCH
Confidence 9999999998876543 3222 2 8899998875 46799999999 9986 689999999876 999665
Q ss_pred --hHHHHHHhhhcCCEEEEecccccCcc---cccCCC----CCccEEEEccccccCCCceEEEEEecCCCCccccccccC
Q psy15216 1551 --ILEIGELCRSKGVIFHCDAAQAVGKI---DINIQN----YKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGG 1621 (2602)
Q Consensus 1551 --l~~I~~ia~~~gi~vivD~a~~~g~~---~~~l~~----~~~D~~v~S~~K~~gp~G~G~l~~~~~~~~~l~~~~~g~ 1621 (2602)
+++|.++|++||+++|+|++|+.+.. ...... .+.|++++|+||+++|.|+|+++.++++++.+......
T Consensus 160 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~g~~~G~g~~~~~~~~~~~~~~~~~~- 238 (356)
T 1v72_A 160 DEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKR- 238 (356)
T ss_dssp HHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSCEEEEESSGGGHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccCCCcCccEEEEECHHHHhhHHHHhhc-
Confidence 88999999999999999999864311 111111 35789999999985677778998887766655432210
Q ss_pred CccccCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcH
Q psy15216 1622 GHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGE 1700 (2602)
Q Consensus 1622 ~~~~~~~~gt~~~~~~~al~~aL~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~ 1700 (2602)
.++.......+...++..+. ..+.+..++..++++++.+.|.+ ++++.+..+.. .....+.++ .
T Consensus 239 -------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~---~~~~~~~~~----~ 303 (356)
T 1v72_A 239 -------AGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEG-LGGVEVLGGTE---ANILFCRLD----S 303 (356)
T ss_dssp -------TTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTT-CTTEEEESCCC---SSEEEEEEC----H
T ss_pred -------cCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh-CCCcEEccCCC---ccEEEEEcC----H
Confidence 11111111222223343322 23456677888999999999987 68888865422 223333333 3
Q ss_pred HHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1701 SLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1701 ~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
++...| +||.+++|. +. .+++|++++..+|.+++++++++|++.
T Consensus 304 ~~~~~l~~~gi~v~~g~-~~--------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~ 349 (356)
T 1v72_A 304 AMIDALLKAGFGFYHDR-WG--------------------PNVVRFVTSFATTAEDVDHLLNQVRLA 349 (356)
T ss_dssp HHHHHHHHTTCBCBCSS-SS--------------------TTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCeEEeccc-cC--------------------CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 555555 788888765 21 178999999999999999999999873
No 352
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.85 E-value=5.1e-20 Score=241.40 Aligned_cols=311 Identities=14% Similarity=0.107 Sum_probs=208.7
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHH-HHhCCcE
Q psy15216 34 IYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFR 112 (2602)
Q Consensus 34 ~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~ 112 (2602)
.+++...+..+++++++++++|.+ ..++++++++|++.++.++. ++||+|+++.++|+++...+.. ++..|++
T Consensus 51 ~y~~~~~~~~~~l~~~la~~~g~~--~~v~~~sGt~A~~~~l~~~~----~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~ 124 (421)
T 2ctz_A 51 IYSRIMNPTVDVLEKRLAALEGGK--AALATASGHAAQFLALTTLA----QAGDNIVSTPNLYGGTFNQFKVTLKRLGIE 124 (421)
T ss_dssp SCBTTBCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC----CTTCEEEECSCCCHHHHHHHHTHHHHTTCE
T ss_pred cccCCCChHHHHHHHHHHHHhCCC--ceEEecCHHHHHHHHHHHHh----CCCCEEEEeCCCchHHHHHHHHHHHHcCCE
Confidence 333333456789999999999976 34556667999999999886 7999999999999998887743 3567999
Q ss_pred EEEe-ccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEeccc-ccccccccCCCCCcc
Q psy15216 113 VTYL-KPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQ-AVGKIDINIQNYKVD 190 (2602)
Q Consensus 113 v~~v-~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~-a~g~~~~dl~~~~~D 190 (2602)
++++ +.+ |+++++++++++|++|++++++||||.+.|+++|.++|++||+++|+|++| +.|... .....++|
T Consensus 125 ~~~~~~~~-----d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~-~~~~~~~D 198 (421)
T 2ctz_A 125 VRFTSREE-----RPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL-RPLAWGAA 198 (421)
T ss_dssp EEECCTTC-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC-CGGGGTCS
T ss_pred EEEECCCC-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC-CccccCCe
Confidence 9999 754 899999999999999999999999999999999999999999999999999 877522 22245789
Q ss_pred EEEeccccccCCCC--cEEEEEec---CC----CCcccceecCCCccc--------------ccc----cc-CcchhHHH
Q psy15216 191 LMSFSAHKIYGPKG--IGALYIRR---NP----RTRIEAQIHGGGHEY--------------GLR----SG-TLATHQIV 242 (2602)
Q Consensus 191 ~~~~S~~K~~Gp~G--~G~l~~~~---~~----~~~l~~~~~g~~~~~--------------~~~----~g-t~~~~~~~ 242 (2602)
++++|+||++|++| +|++++.+ ++ .+.+.+...++.... +++ .| ..+....+
T Consensus 199 i~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~ 278 (421)
T 2ctz_A 199 LVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAW 278 (421)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHH
T ss_pred EEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 99999999777554 67777752 22 223444333322110 000 11 22222222
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCC---------------CCCCceEEEEEccc--ChhH
Q psy15216 243 GMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---------------NRIPHNLNISFNFI--EGES 305 (2602)
Q Consensus 243 al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~---------------~~~~~~~~~~~~~~--~~~~ 305 (2602)
.+..+++ .+....++..++++++.+.|.+ .|++..+..+. .....++.|.+... +...
T Consensus 279 ~~~~~l~----~l~~r~~~~~~~a~~l~~~L~~-~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~ 353 (421)
T 2ctz_A 279 VVLLGME----TLSLRAERHVENTLHLAHWLLE-QPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKR 353 (421)
T ss_dssp HHHHHHT----THHHHHHHHHHHHHHHHHHHHT-CTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHH
T ss_pred HHHcCcc----hHHHHHHHHHHhHHHHHHHHHh-CCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHH
Confidence 2222332 2445566667899999999988 78888753211 11234455555542 2345
Q ss_pred HHHHh--CCeEEcccccCC------CCC--CChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHH
Q psy15216 306 LLMAI--KDIAVSSGSACT------SAS--LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKL 365 (2602)
Q Consensus 306 ~~~~L--~gI~v~~g~~~~------~~~--~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~ 365 (2602)
++..+ .++.++.|..++ +.. ..+...+..+|+++ +.||+|++.++.++.++.+.++
T Consensus 354 ~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~----~~vRlS~g~e~~~~li~~l~~a 419 (421)
T 2ctz_A 354 FISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSP----EMVRLSVGLEHVEDLKAELKEA 419 (421)
T ss_dssp HHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCT----TEEEEECCSSCHHHHHHHHHHH
T ss_pred HHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCC----CeEEEEeCCCCHHHHHHHHHHH
Confidence 66666 455666663322 111 11223456778763 8999999976544444444443
No 353
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.85 E-value=5.8e-21 Score=251.34 Aligned_cols=301 Identities=16% Similarity=0.167 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHH-HhCCcEEEEecc
Q psy15216 40 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKP 118 (2602)
Q Consensus 40 ~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~~ 118 (2602)
.+..+++++++++++|.+ ++++++|+++|+++++. +. ++||+|+++.+.|+++...+... +..|++++.++.
T Consensus 132 ~~~~~~l~~~la~~~g~~--~~i~~~sGt~al~~~l~-~~----~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 204 (464)
T 1ibj_A 132 NPTRDALESLLAKLDKAD--RAFCFTSGMAALSAVTH-LI----KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT 204 (464)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHT-TS----CTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT
T ss_pred CHHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHH-Hh----CCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCC
Confidence 346889999999999975 77788888999988875 44 79999999999999987766443 556999999986
Q ss_pred CCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccccccCCCCCccEEEecccc
Q psy15216 119 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 198 (2602)
Q Consensus 119 ~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K 198 (2602)
+ |+++|+++++++|++|++++|+||||.++|+++|+++|++||+++|+|++|+.|.....+. +++|++++|+||
T Consensus 205 ~-----d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~-~~~div~~S~sK 278 (464)
T 1ibj_A 205 T-----KLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE-LGADIVMHSATK 278 (464)
T ss_dssp T-----SHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG-TTCSEEEEETTT
T ss_pred C-----CHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh-cCCEEEEECCcc
Confidence 4 8999999999999999999999999999999999999999999999999998876421222 578999999999
Q ss_pred cc-CCCCc--EEEEEec-CCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH---
Q psy15216 199 IY-GPKGI--GALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYN--- 271 (2602)
Q Consensus 199 ~~-Gp~G~--G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~--- 271 (2602)
++ |+.|+ |++++++ ++++.+.+... ...++.+....+++.++++.....++...+....+.+++.+
T Consensus 279 ~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~-------~~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~ 351 (464)
T 1ibj_A 279 FIAGHSDVMAGVLAVKGEKLAKEVYFLQN-------SEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPR 351 (464)
T ss_dssp TTTCSSCCCCEEEEECSHHHHHHHHHHHH-------HTTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred cccCCCCCcEEEEEEChHHHHHHHHHHHH-------hcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 55 56675 9999985 55555543321 11223444444444455542222233333333333333332
Q ss_pred -------HHhhccCceEEeCCCCCCCCceEEEEEcccC-hhHHHHHh--CCeEEcccc----cCCCCCC----ChHHHHH
Q psy15216 272 -------GLMESIEEIYINGDMNNRIPHNLNISFNFIE-GESLLMAI--KDIAVSSGS----ACTSASL----EPSYVLR 333 (2602)
Q Consensus 272 -------~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~L--~gI~v~~g~----~~~~~~~----~~~~~~~ 333 (2602)
.|.+ +|++.+..+.......++.+.+.+.+ ...+++.| .+|.++.|. .|.+... .+...+.
T Consensus 352 v~~~~~~~L~~-~p~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~ 430 (464)
T 1ibj_A 352 VKKVYYAGLPD-HPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVRE 430 (464)
T ss_dssp CCEEECTTSTT-STTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSS
T ss_pred ceEEECCCCCC-CcchHHHhccCCCCceEEEEEECCHHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHH
Confidence 2222 34444443332212334445443221 23466666 688888775 3332100 0000011
Q ss_pred HcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 334 ALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 334 ~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.+|.. +++||+|++. ||++++++.|++.
T Consensus 431 ~~g~~----~~~iRlsvg~----edi~~li~~L~~a 458 (464)
T 1ibj_A 431 ARGLT----EDLVRISAGI----EDVDDLISDLDIA 458 (464)
T ss_dssp SSSCC----TTCEEEECCS----SCHHHHHHHHHHH
T ss_pred hcCCC----cCeEEEEeCC----CCHHHHHHHHHHH
Confidence 12322 3789999995 8899999998863
No 354
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.85 E-value=5.1e-20 Score=242.77 Aligned_cols=294 Identities=10% Similarity=0.063 Sum_probs=209.6
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCCHHHHHH--HHHHhhhhhhcc--C---------CCEEEEcCCCCcchHHHHHHHHhC
Q psy15216 1439 IEKARNEVAQLIYADPREIIWTSGATESNN--LAIKGAAHFYKK--R---------GKHIITVQTEHKSVLDSIRKLEND 1505 (2602)
Q Consensus 1439 ~~~lr~~ia~~~g~~~~~iv~t~gaT~al~--~al~~l~~~~~~--~---------gd~Vlv~~~~~~s~~~~~~~~~~~ 1505 (2602)
..++|+++++++++++++|++|+|++++++ +++.++. + + ||+|++++|+|+++...+...
T Consensus 72 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~----~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~--- 144 (423)
T 3ez1_A 72 LPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALL----HGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTL--- 144 (423)
T ss_dssp CHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHH----TCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHH---
T ss_pred hHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHh----ccCCCccccccCCCCEEEEcCCCcHHHHHHHHHc---
Confidence 568999999999999999999999999998 8888877 5 6 699999999999988877776
Q ss_pred CcEEEEeccCCCCCcChhHHHhhc--cCCceEEEE-eccccccccccChH---HHHHHh-hhcCCEEEEecccccCcc--
Q psy15216 1506 GFRVTYLKPKNNGLITLSQLEEKI--CSDTILVSV-MLVNNEIGVIQPIL---EIGELC-RSKGVIFHCDAAQAVGKI-- 1576 (2602)
Q Consensus 1506 G~~v~~v~~~~~~~id~d~l~~~i--~~~t~lv~l-~~~~n~tG~~~~l~---~I~~ia-~~~gi~vivD~a~~~g~~-- 1576 (2602)
|++++.++.+.++ +|+++|++++ ++++++|++ ++++||||.++|.+ +|+++| ++||+++|+|++|+....
T Consensus 145 g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~ 223 (423)
T 3ez1_A 145 GFELLTVDMQSDG-PDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVE 223 (423)
T ss_dssp TCEEEEEEEETTE-ECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCS
T ss_pred CCEEEeccCCCCC-CCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCC
Confidence 9999999987765 9999999999 688998875 58999999999976 888888 899999999999873211
Q ss_pred -----cccC-------CCCCccEEEEccccc-cCCCceEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHH
Q psy15216 1577 -----DINI-------QNYKVDLMSFSAHKI-YGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEA 1643 (2602)
Q Consensus 1577 -----~~~l-------~~~~~D~~v~S~~K~-~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~a 1643 (2602)
+.++ ...+.++++.|+||. ++..++||+++++++++.+..... ....+++...+.++..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~a~~~~ 296 (423)
T 3ez1_A 224 EDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLG-------AQSIGPNKVEQARHVKF 296 (423)
T ss_dssp SSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHHHHHHHH-------HSCSCCCHHHHHHHHHH
T ss_pred CCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHHHHHHHh-------hhccCCCHHHHHHHHHH
Confidence 1111 133567889999994 333348999999876666544321 11223455555555455
Q ss_pred HHH----HHHHHHHHHHHHHHHHHHHHHHHhhc---CC-cEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEcc
Q psy15216 1644 FRL----ARIEMKEELKRILFLQKRLYNGLMES---IE-EIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSS 1713 (2602)
Q Consensus 1644 L~~----~~~~~~~~~~~~~~l~~~l~~~L~~~---~~-gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~ 1713 (2602)
+.. ....+.+..+.+.+.++.+.+.|.+. ++ ++.+..+.. .....+.++..+...+...| +||.+++
T Consensus 297 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~l~~~gv~v~~ 373 (423)
T 3ez1_A 297 LTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKG---GYFISLDTAEPVADRVVKLAEAAGVSLTP 373 (423)
T ss_dssp HHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSB---SSCEEEEESSSCHHHHHHHHHHTTEECCC
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCc---cEEEEEECCCCcHHHHHHHHHHCCcEEec
Confidence 553 12334555555555555555555432 22 366654322 23344555544455565555 8999999
Q ss_pred -ccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1714 -GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1714 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
|..|... .....+++||+++.. +.+++++++++|++.
T Consensus 374 ~g~~~~~~--------------~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~ 411 (423)
T 3ez1_A 374 AGATYPAG--------------QDPHNRNLRLAPTRP-PVEEVRTAMQVVAAC 411 (423)
T ss_dssp TTTTSSTT--------------CCSSSCEEEECCSSS-CHHHHHHHHHHHHHH
T ss_pred CcccccCC--------------CCCCCCeEEEEcCCC-CHHHHHHHHHHHHHH
Confidence 5555421 012248999999765 999999999999974
No 355
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.85 E-value=1.5e-19 Score=238.14 Aligned_cols=331 Identities=15% Similarity=0.134 Sum_probs=227.9
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
++|+.+.+++.+.+...+ ++. ......++|+++++++|.+ ++++++|+|+|+++++.++. +||
T Consensus 29 ~~p~~~~~a~~~~~~~~~-y~~---------~~~~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~l~~l~-----~gd 91 (424)
T 2po3_A 29 IDRARLYERLDRALDSQW-LSN---------GGPLVREFEERVAGLAGVR--HAVATCNATAGLQLLAHAAG-----LTG 91 (424)
T ss_dssp CCHHHHHHHHHHHHHHTC-CSS---------SCHHHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHHT-----CCS
T ss_pred CChHHHHHHHHHHHhcCC-ccc---------CCHHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcC-----CCC
Confidence 346688999988886421 111 0135788999999999974 89999999999999999875 689
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC-CCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcC
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g 166 (2602)
+|++++++|+++...+... |++++.+++++ ++.+|+++|++++++++++|+++| |||...++++|.++|++||
T Consensus 92 ~Vlv~~~~~~~~~~~~~~~---G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~~~l~~i~~la~~~~ 165 (424)
T 2po3_A 92 EVIMPSMTFAATPHALRWI---GLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVH---LWGRPCAADQLRKVADEHG 165 (424)
T ss_dssp EEEEESSSCTHHHHHHHHT---TCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEEC---GGGCCCCHHHHHHHHHHTT
T ss_pred EEEECCCccHHHHHHHHHc---CCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEEC---CCCCcCCHHHHHHHHHHcC
Confidence 9999999999988766554 99999999886 678999999999999999999865 7999999999999999999
Q ss_pred CEEEEecccccccccccCCCC--CccEEEeccc--cccCCCCcEEEEEe-cCCCCcccceecCCCcc-ccc-cccCc-ch
Q psy15216 167 VIFHCDAAQAVGKIDINIQNY--KVDLMSFSAH--KIYGPKGIGALYIR-RNPRTRIEAQIHGGGHE-YGL-RSGTL-AT 238 (2602)
Q Consensus 167 ~~livD~a~a~g~~~~dl~~~--~~D~~~~S~~--K~~Gp~G~G~l~~~-~~~~~~l~~~~~g~~~~-~~~-~~gt~-~~ 238 (2602)
+++|+|++|+.|.. .+.... ..|++++|+| |.+++..+|+++.+ +++++.+.+....+... ... ..|.. ..
T Consensus 166 ~~li~Dea~~~g~~-~~~~~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~ 244 (424)
T 2po3_A 166 LRLYFDAAHALGCA-VDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKM 244 (424)
T ss_dssp CEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCC
T ss_pred CEEEEECccccCCe-ECCeecccccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCc
Confidence 99999999997653 221111 1589999998 66655447999988 56666665543321110 000 11111 11
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCC--CCCceEEEEEc----ccChhHHHHHh--
Q psy15216 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN--RIPHNLNISFN----FIEGESLLMAI-- 310 (2602)
Q Consensus 239 ~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~--~~~~~~~~~~~----~~~~~~~~~~L-- 310 (2602)
..+ +...++.. ..++++..++..++++++.+.|.+ ++++.+..++.. .....+.+.++ ..+..++.+.|
T Consensus 245 ~~~-~aa~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~ 321 (424)
T 2po3_A 245 SEA-AAAMGLTS-LDAFPEVIDRNRRNHAAYREHLAD-LPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKA 321 (424)
T ss_dssp CHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCS-CTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHH
T ss_pred CHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcc-CCCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHH
Confidence 222 22233332 234677888888999999999977 678888763321 11234445555 34666777766
Q ss_pred CCeEEcccccCCCC-CCChHHHHHHcC---CC--ccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 311 KDIAVSSGSACTSA-SLEPSYVLRALG---CN--DELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 311 ~gI~v~~g~~~~~~-~~~~~~~~~~~g---~~--~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+||.+++ .|.++ +..+.+ ..+| .. .......||++++.+++++|+++++++|++.
T Consensus 322 ~gI~v~~--~~~~~~~~~~~~--~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~ 382 (424)
T 2po3_A 322 EGVHTRA--YFSPGCHELEPY--RGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLC 382 (424)
T ss_dssp TTEECBC--TTCSCGGGSTTT--TTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred CCCceec--ccCCccccchhh--hhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHH
Confidence 7999886 33311 000000 0011 00 0011245899988999999999999999974
No 356
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.85 E-value=1.2e-20 Score=245.87 Aligned_cols=296 Identities=14% Similarity=0.118 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHH-HHhCCcEEEEeccC
Q psy15216 1437 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKPK 1515 (2602)
Q Consensus 1437 ~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~~ 1515 (2602)
....++++++++++|.+ ++++++|+++|++.++.++. ++||+|+++++.|+++...+.. +...|++++.++.+
T Consensus 62 ~~~~~l~~~ia~~~g~~--~~i~~~~g~~ai~~~~~~l~----~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 135 (404)
T 1e5e_A 62 PTVSNLEGKIAFLEKTE--ACVATSSGMGAIAATVLTIL----KAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA 135 (404)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC----CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred hHHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHh----CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC
Confidence 45678999999999975 77888888999999999886 7999999999999998886543 45569999999865
Q ss_pred CCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhh-cCCEEEEecccccCcccccCCCCCccEEEEcccc
Q psy15216 1516 NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS-KGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 1594 (2602)
Q Consensus 1516 ~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~-~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K 1594 (2602)
|+++|+++++++|++|++++|+||||.++|+++|.++|++ ||+++++|++|+.+.....+ .++.|+++.|+||
T Consensus 136 -----d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~-~~~~di~~~S~sK 209 (404)
T 1e5e_A 136 -----IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPV-DFGVDVVVHSATK 209 (404)
T ss_dssp -----STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGG-GGTCSEEEEETTT
T ss_pred -----CHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcc-ccCCEEEEEcCcc
Confidence 7899999999999999999999999999999999999999 99999999999877632222 3578999999999
Q ss_pred ccCCCc---eEEEEEecCCCC-ccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15216 1595 IYGPKG---IGALYIRRNPRT-RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLM 1670 (2602)
Q Consensus 1595 ~~gp~G---~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~ 1670 (2602)
+++.+| +|+++++++.++ .+.+...+ +..++.+....+++..+++. .....++.....+.+.+.+.
T Consensus 210 ~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~------~~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~ 279 (404)
T 1e5e_A 210 YINGHTDVVAGLICGKADLLQQIRMVGIKD------ITGSVISPHDAWLITRGLST----LNIRMKAESENAMKVAEYLK 279 (404)
T ss_dssp TTTCSSCCCCEEEEECHHHHHHHHHTCCCC------CCCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCeEEEEEECHHHHHHHHHHHHHh------CCCCCCCHHHHHHHHHhHhH----HHHHHHHHHHHHHHHHHHHH
Confidence 666444 499999987665 55443211 10123444444444455543 23344444556666666666
Q ss_pred hcCCcEE-EeCCC--C-----------CCCCceEEEEEecCCcHHHHHhc--CCEEEccccccC----------CCC--C
Q psy15216 1671 ESIEEIY-INGDM--N-----------NRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACT----------SAS--L 1722 (2602)
Q Consensus 1671 ~~~~gl~-i~~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~----------~~~--~ 1722 (2602)
+ .+.+. +..+. . .....+..+.++.. .......+ .+|. ..+..++ ... .
T Consensus 280 ~-~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~l~~~~i~-~~~~s~G~~~sl~~~~~~~~~~~ 356 (404)
T 1e5e_A 280 S-HPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSG-FEGAKKLLDNLKLI-TLAVSLGGCESLIQHPASMTHAV 356 (404)
T ss_dssp T-CTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTH-HHHHHHHHHTCSSS-EESSCCCSSSCEEECGGGTTTTT
T ss_pred h-CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCC-HHHHHHHHHhCCCc-eeccCCCCcceeeeccccccccc
Confidence 5 33332 11111 0 01123333333221 12222222 5663 3333222 110 1
Q ss_pred ChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1723 EPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1723 ~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.+.......|.+ .++||||++. ++++++++.|++.
T Consensus 357 ~~~~~~~~~g~~----~~~iRis~g~----e~~~~li~~l~~a 391 (404)
T 1e5e_A 357 VPKEEREAAGIT----DGMIRLSVGI----EDADELIADFKQG 391 (404)
T ss_dssp SCHHHHHHTTCC----TTEEEEECCS----SCHHHHHHHHHHH
T ss_pred CCHHHHHhcCCC----CCeEEEEeCC----CCHHHHHHHHHHH
Confidence 122233344543 3899999995 7899999988863
No 357
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.84 E-value=5.9e-20 Score=238.75 Aligned_cols=300 Identities=13% Similarity=0.076 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHH-HhCCcEEEEecc
Q psy15216 1436 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKP 1514 (2602)
Q Consensus 1436 ~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~~ 1514 (2602)
.....+++++++++++.+ +.+++ +++++|++.++.++. ++||+|+++.++|+++...+... +..|++++.++.
T Consensus 51 ~~~~~~l~~~la~~~~~~-~~i~~-~sGt~a~~~~~~~~~----~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 124 (386)
T 1cs1_A 51 NPTRDVVQRALAELEGGA-GAVLT-NTGMSAIHLVTTVFL----KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ 124 (386)
T ss_dssp CHHHHHHHHHHHHHHTCS-EEEEE-SSHHHHHHHHHHHHC----CTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT
T ss_pred CccHHHHHHHHHHHhCCC-cEEEe-CCHHHHHHHHHHHHh----CCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCC
Confidence 345788999999999986 45555 555999999999886 79999999999999877666443 556999999876
Q ss_pred CCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccc
Q psy15216 1515 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 1594 (2602)
Q Consensus 1515 ~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K 1594 (2602)
+ |++++++++++++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+....++ .+++|++++|+||
T Consensus 125 ~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~di~~~s~sK 198 (386)
T 1cs1_A 125 G-----DEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL-ALGADLVLHSCTK 198 (386)
T ss_dssp T-----CHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GGTCSEEEEETTT
T ss_pred C-----CHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc-ccCceEEEEcCcc
Confidence 4 899999999999999999999999999999999999999999999999999887654333 4678999999999
Q ss_pred ccC-CCce--EEEEEec-CCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15216 1595 IYG-PKGI--GALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLM 1670 (2602)
Q Consensus 1595 ~~g-p~G~--G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~ 1670 (2602)
+++ |.+. |++++++ ++++.+.+...++ .++.+....++...+++. +....++..+.++++.+.|.
T Consensus 199 ~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~-------~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~ 267 (386)
T 1cs1_A 199 YLNGHSDVVAGVVIAKDPDVVTELAWWANNI-------GVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAIVKYLQ 267 (386)
T ss_dssp TTTCSSCCCCEEEEESSHHHHHHHHHHHHHH-------TCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCceeEEEEeCcHHHHHHHHHHHHhc-------CCCCCHHHHHHHHhcccH----HHHHHHHHHHHHHHHHHHHh
Confidence 665 5543 9999986 5666665443221 123444444443344442 33445556667777777776
Q ss_pred hcCCcEEEe-CCC-------------CCCCCceEEEEEecCCcHHHHHhc--CCEEEcc---c------cccCC--CCCC
Q psy15216 1671 ESIEEIYIN-GDM-------------NNRIPHNLNISFNFIEGESLLMAI--KDIAVSS---G------SACTS--ASLE 1723 (2602)
Q Consensus 1671 ~~~~gl~i~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~---g------~~~~~--~~~~ 1723 (2602)
+ .+.+.-. .+. ......+..+.++.. ...+...| .||.++. | .+|.. ....
T Consensus 268 ~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~ 345 (386)
T 1cs1_A 268 T-QPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD-EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGM 345 (386)
T ss_dssp T-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC-HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTS
T ss_pred c-CCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC-HHHHHHHHHhCCcceEcccCCCcceeeecccccccccC
Confidence 6 5555322 111 011234444554432 34444444 6888763 3 22211 1112
Q ss_pred hhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1724 PSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1724 ~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
++.....+|..+ +++|+|++.++++++++++.++|++
T Consensus 346 ~~~~~~~~g~~~----~~iRis~~~~~~~~~i~~l~~al~~ 382 (386)
T 1cs1_A 346 APEARAAAGISE----TLLRISTGIEDGEDLIADLENGFRA 382 (386)
T ss_dssp CHHHHHHHTCCT----TEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred CHHHHHhcCCCC----CeEEEEEccCCHHHHHHHHHHHHHH
Confidence 344555666543 8999999999999999999999986
No 358
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.84 E-value=7e-20 Score=237.46 Aligned_cols=303 Identities=16% Similarity=0.219 Sum_probs=213.9
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccc---cC
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK---KR 85 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~---~~ 85 (2602)
+++.+.+++.+.+... .++.. .|. .....++++++++++|+ ++++++++|+|+|+++++.++. .+. ++
T Consensus 45 ~~~~v~~a~~~~~~~~-~~~~~-~y~-----~~~~~~l~~~la~~~g~-~~~v~~~~g~t~a~~~~~~~~~-~~~~~~~~ 115 (375)
T 2eh6_A 45 AYPKLTEALKEQVEKL-LHVSN-LYE-----NPWQEELAHKLVKHFWT-EGKVFFANSGTESVEAAIKLAR-KYWRDKGK 115 (375)
T ss_dssp SCHHHHHHHHHHHHHC-SCCCT-TBC-----CHHHHHHHHHHHHTSSS-CEEEEEESSHHHHHHHHHHHHH-HHHHHTTC
T ss_pred CCHHHHHHHHHHHHhc-cccCc-ccC-----CHHHHHHHHHHHhhcCC-CCeEEEeCchHHHHHHHHHHHH-HHhccCCC
Confidence 7899999999988653 22222 121 13467889999999998 4789999999999999997641 112 57
Q ss_pred C-CEEEEcCCCCcccHHHHHHHHhC-----CcE-----EEEeccCCCCccChHHHHhhccCCceEEEEecccCccccccc
Q psy15216 86 G-KHIITVQTEHKSVLDSIRKLEND-----GFR-----VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP 154 (2602)
Q Consensus 86 g-d~Vlv~~~~~~s~~~~~~~~~~~-----G~~-----v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~ 154 (2602)
| |+|++++++|+++...+..+... |.. +..++. .|+++|++++++++++|++++++||||.+.|
T Consensus 116 g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~ 190 (375)
T 2eh6_A 116 NKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLDEETAGIIIEVIQGEGGVNEA 190 (375)
T ss_dssp CCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCCTTEEEEEECSEETTTTSEEC
T ss_pred CCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhcCCeEEEEEeCccCCCCCcCC
Confidence 8 99999999998876666544110 211 333332 5899999999999999999999999999988
Q ss_pred ----HHHHHHHHHhcCCEEEEecccc-ccccc--ccCCCCC--ccEEEeccccccC-CCCcEEEEEecCCCCcccceecC
Q psy15216 155 ----ILEIGELCRSKGVIFHCDAAQA-VGKID--INIQNYK--VDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHG 224 (2602)
Q Consensus 155 ----l~~I~~la~~~g~~livD~a~a-~g~~~--~dl~~~~--~D~~~~S~~K~~G-p~G~G~l~~~~~~~~~l~~~~~g 224 (2602)
+++|.++|++||+++|+|++|+ ++..+ +++..++ +|+++ ++|.+| +.++|++++++++++.+.+...+
T Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s--~SK~~~~g~~~G~~~~~~~~~~~~~~~~~~ 268 (375)
T 2eh6_A 191 SEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIA--LAKGLGGGVPIGAILAREEVAQSFTPGSHG 268 (375)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGGTTSCCEEEEEEHHHHTTCCTTSCC
T ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEE--EcccccCCCCeEEEEEcHHHHhhhcCCCCC
Confidence 9999999999999999999998 55432 2334444 78875 459554 45689999998877777652211
Q ss_pred CCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcccChh
Q psy15216 225 GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGE 304 (2602)
Q Consensus 225 ~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 304 (2602)
. ..++ +.....++.++|+... +..++.+++++++.+.|.+ ++...+. + ...++.+.++. +..
T Consensus 269 ~------~~~~-~~~~~~~~~~~l~~~~----~~~~~~~~~~~~l~~~L~~-~~~~~~~-~----~g~~~~~~~~~-~~~ 330 (375)
T 2eh6_A 269 S------TFGG-NPLACRAGTVVVDEVE----KLLPHVREVGNYFKEKLKE-LGKGKVK-G----RGLMLGLELER-ECK 330 (375)
T ss_dssp C------SSTT-CHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH-TTSSEEE-E----ETTEEEEECSS-CCH
T ss_pred C------CCCC-CHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH-HhcCCce-E----EEEEEEEEEcC-cHH
Confidence 1 1223 4444444456666432 6777888889999999977 4332111 1 12333444432 455
Q ss_pred HHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 305 SLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 305 ~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
++.+.| +||.++++. .+++|++++.+++++|+++++++|++
T Consensus 331 ~~~~~l~~~gi~~~~~~-----------------------~~~iRi~~~~~~~~~~i~~~~~~l~~ 373 (375)
T 2eh6_A 331 DYVLKALEKGLLINCTA-----------------------GKVLRFLPPLIIQKEHIDRAISVLRE 373 (375)
T ss_dssp HHHHHHHHTTEECEEET-----------------------TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEecCC-----------------------CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 666666 788887541 27899999988999999999999985
No 359
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.84 E-value=5.6e-20 Score=251.11 Aligned_cols=295 Identities=15% Similarity=0.076 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHH-HHHHHhCCcEEEEeccCC
Q psy15216 42 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDS-IRKLENDGFRVTYLKPKN 120 (2602)
Q Consensus 42 ~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~-~~~~~~~G~~v~~v~~~~ 120 (2602)
.+.++++.+|+++|++. .+++++|+|+|+..++.++. ++||+|+++.+.|+++... +. ..|+++++++...
T Consensus 174 ~i~e~e~~lA~~~gae~-~i~v~nGtt~an~~ai~al~----~pGD~VLv~~~~H~S~~~~~~~---l~Ga~~v~v~~~~ 245 (730)
T 1c4k_A 174 PAVAAEKHAARVYNADK-TYFVLGGSSNANNTVTSALV----SNGDLVLFDRNNHKSVYNSALA---MAGGRPVYLQTNR 245 (730)
T ss_dssp HHHHHHHHHHHHTTCSE-EEEESSHHHHHHHHHHHHHC----CTTCEEEEETTCCHHHHHHHTT---TTCCEEEEECEEE
T ss_pred HHHHHHHHHHHHHCCCc-EEEECCHHHHHHHHHHHHhc----CCCCEEEEcCCchHHHHHHHHH---HCCCEEEEEeCCc
Confidence 57899999999999863 58888888899999999987 8999999999999998876 43 3499999987643
Q ss_pred C-----CccChHHH-----HhhccCC------c----eEEEEecccCcccccccHHHHHHHHHhcCCEEEEeccccccc-
Q psy15216 121 N-----GLITLSQL-----EEKICSD------T----ILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGK- 179 (2602)
Q Consensus 121 ~-----~~ld~e~l-----~~~i~~~------t----klv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~- 179 (2602)
+ +.+|+++| +++++++ + ++++++++ |++|.+.|+++|+++|++||+++++|+||+.+.
T Consensus 246 ~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~ 324 (730)
T 1c4k_A 246 NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQ 324 (730)
T ss_dssp CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGG
T ss_pred cccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccc
Confidence 2 34799999 9999775 5 89999998 589999999999999999999999999996421
Q ss_pred --------ccccCCCCCcc----EEEecccc-ccCCCCcEEEEEecCCCCc----ccceecCCCccccccccCcchhHHH
Q psy15216 180 --------IDINIQNYKVD----LMSFSAHK-IYGPKGIGALYIRRNPRTR----IEAQIHGGGHEYGLRSGTLATHQIV 242 (2602)
Q Consensus 180 --------~~~dl~~~~~D----~~~~S~~K-~~Gp~G~G~l~~~~~~~~~----l~~~~~g~~~~~~~~~gt~~~~~~~ 242 (2602)
.+++...+++| ++++|+|| +.|+.+.|+++++++.+.. +..... ......+..++|++..++
T Consensus 325 f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~~~~-~~~~~~~~stsp~~~~ia 403 (730)
T 1c4k_A 325 FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHF-NNSFNLFMSTSPFYPMYA 403 (730)
T ss_dssp SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHH-HHHHHHHSCSSCCHHHHH
T ss_pred cCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCHHHH-HHHHHHhCCCCCcHHHHH
Confidence 12333344677 99999999 5567778899888764311 110000 000012346789999999
Q ss_pred HHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCC--------------------------------C-
Q psy15216 243 GMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMN--------------------------------N- 288 (2602)
Q Consensus 243 al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~--------------------------------~- 288 (2602)
++.+|+++... ...+..++..++++++++.|.+.++|++++.+.. .
T Consensus 404 al~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 483 (730)
T 1c4k_A 404 ALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEG 483 (730)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTT
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccc
Confidence 99889886554 4567778889999999999976458888876532 0
Q ss_pred C-------CCceEEEEEcc------------cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEE
Q psy15216 289 R-------IPHNLNISFNF------------IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (2602)
Q Consensus 289 ~-------~~~~~~~~~~~------------~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (2602)
. .|.-+.+..++ .++..+.+.| +||.++.. ..+.+|
T Consensus 484 ~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~-----------------------~~~~ir 540 (730)
T 1c4k_A 484 YGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKS-----------------------DLNSIL 540 (730)
T ss_dssp CCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEE-----------------------CSSEEE
T ss_pred cCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEEC-----------------------CCCeEE
Confidence 0 01113333332 2344555555 56665421 126799
Q ss_pred EecCCCCCHHHHHHHHHHHHhh
Q psy15216 348 FTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 348 is~~~~~t~edid~li~~L~~~ 369 (2602)
++++.++|.+++++++++|++.
T Consensus 541 ~~~s~g~t~e~i~~Ll~aL~~i 562 (730)
T 1c4k_A 541 FLMTPAETPAKMNNLITQLLQL 562 (730)
T ss_dssp EECCTTCCHHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999864
No 360
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.84 E-value=2e-20 Score=246.31 Aligned_cols=316 Identities=11% Similarity=0.029 Sum_probs=218.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHhh-hcCCCCCCCcchhhhHHHHHHHHHHHHHHHh-CC-CCC---cEEEeCCHHHHHHHHH
Q psy15216 2 DYSATTPIDPRVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQLI-YA-DPR---EIIWTSGATESNNLAI 75 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~~-~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~-g~-~~~---~Iv~t~g~T~al~~~~ 75 (2602)
|+....++++.+.+++.+.... ...++.. ....++|+++++++ +. .++ +|++|+|+++|+.+++
T Consensus 50 ~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~----------~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 119 (418)
T 3rq1_A 50 DEEGNLVFLKTVKEEYLSLSDSEHVGYAPI----------AGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLI 119 (418)
T ss_dssp CTTSCBCCCHHHHHHHHTCCHHHHHSCCCT----------TCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHhcccccCCCCCC----------CChHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHH
Confidence 3344567888888887664432 2222221 11345667777755 21 245 8999999999999999
Q ss_pred HhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccC-CCCccChHHHHhhccC----Cce-EEEEecc-cCc
Q psy15216 76 KGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICS----DTI-LVSVMLV-NNE 148 (2602)
Q Consensus 76 ~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-~~~~ld~e~l~~~i~~----~tk-lv~i~~~-~np 148 (2602)
.++. ++||+|+++.|.|+++...+... |++++.++.+ +++.+|+++|++++++ +++ ++++++| +||
T Consensus 120 ~~l~----~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NP 192 (418)
T 3rq1_A 120 HNYT----EPGDEVLTADWYWGAYRVICSDT---GRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNP 192 (418)
T ss_dssp HHHS----CTTCEEEEESSCCTHHHHHHHHT---TCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTT
T ss_pred HHhc----CCCCEEEECCCCchhHHHHHHHc---CCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCC
Confidence 9987 89999999999999987766555 9999999984 4568999999999975 666 8889999 999
Q ss_pred ccccccHHHHH---HHHH------hcCCEEEEecccccccc------cc--cCCCCCcc---EEEeccccccCCCC--cE
Q psy15216 149 IGVIQPILEIG---ELCR------SKGVIFHCDAAQAVGKI------DI--NIQNYKVD---LMSFSAHKIYGPKG--IG 206 (2602)
Q Consensus 149 TG~~~~l~~I~---~la~------~~g~~livD~a~a~g~~------~~--dl~~~~~D---~~~~S~~K~~Gp~G--~G 206 (2602)
||.++|.+++. ++|+ +||+++|+|++|..... ++ .......+ +++.|+||.+|++| +|
T Consensus 193 tG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 272 (418)
T 3rq1_A 193 TGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVG 272 (418)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCE
T ss_pred CCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcce
Confidence 99999966655 5555 89999999999843211 11 11222233 77889999888777 79
Q ss_pred EEEE---ecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHH------HHhHHHHHHHHHHHHHHHHHHHhhcc
Q psy15216 207 ALYI---RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESI 277 (2602)
Q Consensus 207 ~l~~---~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~------~~~~~~~~~~~~~l~~~l~~~L~~~~ 277 (2602)
|+++ ++++++.+....... ......+++..+..++..+++.. .....+.+++++++++++.+.|.+ +
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~ 348 (418)
T 3rq1_A 273 AMIGISDDEEIADEFFEVNKST---SRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQ-V 348 (418)
T ss_dssp EEEEEESSHHHHHHHHHHHHHH---HHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred EEEEEeCCHHHHHHHHHHHHHH---HhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 9998 776666665432100 00001245666666666666421 122346677888888999999977 3
Q ss_pred CceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCC
Q psy15216 278 EEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT 355 (2602)
Q Consensus 278 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t 355 (2602)
|+.+..+... .+++++..+..++.+.| +||.+++|. +++|||++ ..+
T Consensus 349 -g~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~gi~v~~g~------------------------~~iRis~~-~~~ 397 (418)
T 3rq1_A 349 -GLPMLPYRGG-----FFITIPTDSANAICEELKKEHIYVIALA------------------------NGIRIAAC-GIP 397 (418)
T ss_dssp -TCCCCCCCSS-----SEEEEECTTHHHHHHHHHHTTEECEECS------------------------SEEEEEGG-GSC
T ss_pred -CCCCCCCCce-----EEEEcCCCCHHHHHHHHHhCCEEEecCC------------------------CCeEEEEe-cCC
Confidence 6665543221 12333334666776666 799988652 67999987 468
Q ss_pred HHHHHHHHHHHHhh
Q psy15216 356 EKEIDFTIKLLKMK 369 (2602)
Q Consensus 356 ~edid~li~~L~~~ 369 (2602)
++++++++++|++.
T Consensus 398 ~~~i~~~~~~l~~~ 411 (418)
T 3rq1_A 398 KCQMTGLAEKIYNA 411 (418)
T ss_dssp HHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
No 361
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.84 E-value=4.7e-20 Score=246.29 Aligned_cols=322 Identities=13% Similarity=0.066 Sum_probs=218.5
Q ss_pred CHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHh-CC--CCCcEEEeCCHHHHHHHHHHhcccccccCC
Q psy15216 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI-YA--DPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (2602)
Q Consensus 10 p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~-g~--~~~~Iv~t~g~T~al~~~~~~l~~~~~~~g 86 (2602)
|..+++++.+++....+. ....|........+.+.+.+++++.. |. ++++|++|+|+++|+.+++.++. ++|
T Consensus 103 P~~~~~~~~~~l~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~----~~g 177 (498)
T 3ihj_A 103 PEDAKKRARRILQACGGN-SLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILV----SGG 177 (498)
T ss_dssp CHHHHHHHHHHHHHC-----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHC----CCC
T ss_pred CHHHHHHHHHHHHhccCC-CCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHc----CCC
Confidence 566667777776642110 11112222222233444444444444 34 67899999999999999999987 676
Q ss_pred C----EEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC--CCccChHHHHhhccC-----CceEEEEecccCccccccc-
Q psy15216 87 K----HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICS-----DTILVSVMLVNNEIGVIQP- 154 (2602)
Q Consensus 87 d----~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~ld~e~l~~~i~~-----~tklv~i~~~~npTG~~~~- 154 (2602)
| .|+++.|.|+++...+... |++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.+++
T Consensus 178 d~~~d~Vlv~~p~y~~~~~~~~~~---g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~ 254 (498)
T 3ihj_A 178 GKSRTGVMIPIPQYPLYSAVISEL---DAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSR 254 (498)
T ss_dssp GGGSEEEEEEESCCTHHHHHHHHT---TCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCH
T ss_pred CCCCCEEEEeCCCchhHHHHHHHc---CCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCH
Confidence 4 9999999999987777665 99999998875 457999999999976 6899999999999999998
Q ss_pred --HHHHHHHHHhcCCEEEEeccccccccc-----ccCCCC----------Cc-cEEEecccccc-CCCC--cEEEEE---
Q psy15216 155 --ILEIGELCRSKGVIFHCDAAQAVGKID-----INIQNY----------KV-DLMSFSAHKIY-GPKG--IGALYI--- 210 (2602)
Q Consensus 155 --l~~I~~la~~~g~~livD~a~a~g~~~-----~dl~~~----------~~-D~~~~S~~K~~-Gp~G--~G~l~~--- 210 (2602)
+++|+++|++||+++|+|++|+..... ..+... .. .+++.|+||.+ |++| +||+++
T Consensus 255 ~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~ 334 (498)
T 3ihj_A 255 KCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINL 334 (498)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESC
T ss_pred HHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecC
Confidence 556888999999999999998753321 111111 11 26777999976 7677 799984
Q ss_pred ecCCCCcccceecCCCccccccccCcchhHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHhhccCce
Q psy15216 211 RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR----------LARIEMKEELKRILFLQKRLYNGLMESIEEI 280 (2602)
Q Consensus 211 ~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~----------~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~ 280 (2602)
++++++.+.... . ...+++.++..++.++++ .......+.++++.++++++.+.|.+ +||+
T Consensus 335 ~~~l~~~l~~~~-------~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~~g~ 405 (498)
T 3ihj_A 335 HPEIKGQLVKLL-------S-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ-VPGI 405 (498)
T ss_dssp CHHHHHHHHHHH-------H-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTE
T ss_pred CHHHHHHHHHHH-------h-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCc
Confidence 555555554322 1 123456666666666653 11123467778889999999999988 6898
Q ss_pred EEeCCCCCCCCceEEEEEc------------ccChhHH-HHH-h--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCC
Q psy15216 281 YINGDMNNRIPHNLNISFN------------FIEGESL-LMA-I--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHS 344 (2602)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~~------------~~~~~~~-~~~-L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (2602)
.+..+... ...++.+. +.+.+.+ +.. | +||.+.+|..|... ...+
T Consensus 406 ~~~~p~gg---~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~----------------~~~~ 466 (498)
T 3ihj_A 406 HCNPLQGA---MYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQR----------------EGTY 466 (498)
T ss_dssp ECCCCCBS---SEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCC----------------TTCC
T ss_pred EecCCCeE---EEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCC----------------CCCC
Confidence 87755432 12222222 1233333 233 3 69999999988642 1136
Q ss_pred eEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 345 SIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 345 ~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++|++++ .++++++.++++|++.
T Consensus 467 ~~Ris~~--~~~e~l~~~i~~L~~~ 489 (498)
T 3ihj_A 467 HFRMTIL--PPVEKLKTVLQKVKDF 489 (498)
T ss_dssp BEEEECC--SCHHHHHHHHHHHHHH
T ss_pred EEEEEeC--CCHHHHHHHHHHHHHH
Confidence 8999996 6899999999999863
No 362
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.84 E-value=1.9e-20 Score=247.13 Aligned_cols=295 Identities=12% Similarity=0.054 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCCHHHHH--HHHHHhhhhhhcc--C----------CCEEEEcCCCCcchHHHHHHHHh
Q psy15216 1439 IEKARNEVAQLIYADPREIIWTSGATESN--NLAIKGAAHFYKK--R----------GKHIITVQTEHKSVLDSIRKLEN 1504 (2602)
Q Consensus 1439 ~~~lr~~ia~~~g~~~~~iv~t~gaT~al--~~al~~l~~~~~~--~----------gd~Vlv~~~~~~s~~~~~~~~~~ 1504 (2602)
..++|+++++++++++++|++|+|+++++ ++++.++. + + ||+|++++|+|+++...++.+
T Consensus 80 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~----~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~-- 153 (427)
T 3ppl_A 80 IVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYI----FGNNDSVQPWSKEETVKWICPVPGYDRHFSITERF-- 153 (427)
T ss_dssp CHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHH----HCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHT--
T ss_pred cHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHh----ccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHc--
Confidence 57899999999999999999999999999 58888876 4 5 899999999999987766655
Q ss_pred CCcEEEEeccCCCCCcChhHHHhhcc-CCceEEEEe-ccccccccccChH---HHHHHh-hhcCCEEEEecccccCc---
Q psy15216 1505 DGFRVTYLKPKNNGLITLSQLEEKIC-SDTILVSVM-LVNNEIGVIQPIL---EIGELC-RSKGVIFHCDAAQAVGK--- 1575 (2602)
Q Consensus 1505 ~G~~v~~v~~~~~~~id~d~l~~~i~-~~t~lv~l~-~~~n~tG~~~~l~---~I~~ia-~~~gi~vivD~a~~~g~--- 1575 (2602)
|++++.++.+.++ +|+++|+++++ +++++|+++ +++||||.++|.+ +|+++| ++||+++|+|++|+...
T Consensus 154 -g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~ 231 (427)
T 3ppl_A 154 -GFEMISVPMNEDG-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTD 231 (427)
T ss_dssp -TCEEEEEEEETTE-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSS
T ss_pred -CCEEEEeCCCCCC-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCC
Confidence 9999999988765 99999999995 788988865 8999999999976 888998 99999999999987421
Q ss_pred ---ccccC-------CCCCccEEEEccccccCC-CceEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHH
Q psy15216 1576 ---IDINI-------QNYKVDLMSFSAHKIYGP-KGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAF 1644 (2602)
Q Consensus 1576 ---~~~~l-------~~~~~D~~v~S~~K~~gp-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL 1644 (2602)
.++++ ...+.++++.|+||.++| -++||++.++++++.+..... ....+.+...+.++..++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~~~-------~~~~~~~~~~q~~~~~~l 304 (427)
T 3ppl_A 232 EFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGHAG-------IRGIGPNKVNQLAHARYF 304 (427)
T ss_dssp CCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHH-------HHCSCCCHHHHHHHHHHH
T ss_pred CCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHHHhh-------cccCCCCHHHHHHHHHHH
Confidence 11111 133567899999996322 238999998776655543321 111234445555555555
Q ss_pred HH---HHHHHHHHHHHHHHHHHHHHHHHhhcCC---cEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccc
Q psy15216 1645 RL---ARIEMKEELKRILFLQKRLYNGLMESIE---EIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSA 1716 (2602)
Q Consensus 1645 ~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~---gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~ 1716 (2602)
.. ....+.+..+++.++++.+.+.|.+.++ ++.+..+.. .....+.++..+..++...| +||.+++|..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~l~~~gv~v~~~g~ 381 (427)
T 3ppl_A 305 GDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAG---GYFISLDVVPGTASRVAELAKEAGIALTGAGS 381 (427)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSB---SSCEEEECSTTCHHHHHHHHHHTTEECCCTTT
T ss_pred hChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCc---cEEEEEECCcchHHHHHHHHHHCCCEEecCcC
Confidence 42 2344566666667777777666654322 455543322 23344455544456666655 8999999544
Q ss_pred cCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1717 CTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1717 ~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
|... ......+++|||++.. +.+++++++++|++.
T Consensus 382 ~~~~-------------~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~ 416 (427)
T 3ppl_A 382 SYPL-------------RQDPENKNLRLAPSLP-PVEELEVAMDGVATC 416 (427)
T ss_dssp TSGG-------------GCCTTSCEEEECCSSS-CHHHHHHHHHHHHHH
T ss_pred cCCC-------------CCCCCCCeEEEECCCC-CHHHHHHHHHHHHHH
Confidence 3221 0011248999999754 899999999999874
No 363
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.84 E-value=1.3e-20 Score=249.06 Aligned_cols=291 Identities=14% Similarity=0.095 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHh-----CCCCCc---EEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEE
Q psy15216 1439 IEKARNEVAQLI-----YADPRE---IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVT 1510 (2602)
Q Consensus 1439 ~~~lr~~ia~~~-----g~~~~~---iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~ 1510 (2602)
..++|+.+++++ ++++++ |++|+|+++|+++++.++. ++||+|++++|.|+++...+.. ..|++++
T Consensus 90 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~~--~~g~~~~ 163 (430)
T 2x5f_A 90 IEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFV----NQDDTILLPEHNWGNYKLVFNT--RNGANLQ 163 (430)
T ss_dssp CHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHC----CTTCEEEEESSCCTHHHHHHTT--TTCCEEE
T ss_pred CHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHh----CCCCEEEEcCCcCccHHHHHHH--hcCCeEE
Confidence 467889999998 888888 9999999999999999986 8999999999999997665443 0499999
Q ss_pred EeccCC-CCCcChhHHHhhccC---CceEEEEeccccccccccC---hHHHHHHhhh-----cCCEEEEecccccCcc--
Q psy15216 1511 YLKPKN-NGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQP---ILEIGELCRS-----KGVIFHCDAAQAVGKI-- 1576 (2602)
Q Consensus 1511 ~v~~~~-~~~id~d~l~~~i~~---~t~lv~l~~~~n~tG~~~~---l~~I~~ia~~-----~gi~vivD~a~~~g~~-- 1576 (2602)
.++.++ ++.+|+++|++++++ +++++++++|+||||.++| +++|.++|++ ||+++|+|++|+....
T Consensus 164 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~ 243 (430)
T 2x5f_A 164 TYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYED 243 (430)
T ss_dssp EECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSS
T ss_pred EEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCc
Confidence 998865 467999999999987 8999999999999999999 8899999999 9999999999874321
Q ss_pred ----cc--cCCC-CCc---cEEEEccccccCCCc--eEEEEE---ecCCCCccccccccCCccccCCCCCcchhHHHHHH
Q psy15216 1577 ----DI--NIQN-YKV---DLMSFSAHKIYGPKG--IGALYI---RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMG 1641 (2602)
Q Consensus 1577 ----~~--~l~~-~~~---D~~v~S~~K~~gp~G--~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~ 1641 (2602)
++ ++.. .+. ++++.|+||.+|++| +||+++ ++++++.+....... .+...++++...+.++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~a~~ 320 (430)
T 2x5f_A 244 VYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGL---IRSNISSGPLPTQSAVK 320 (430)
T ss_dssp SCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHH---HHTTTSSCCHHHHHHHH
T ss_pred ccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhh---hhcccCCCChHHHHHHH
Confidence 21 2322 334 688899999888778 799999 776666554322110 00123456777777777
Q ss_pred HHHH-HH--HHHHHHHHHHHHHHHHHHHHHHhhcC--CcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc---CCEEEcc
Q psy15216 1642 EAFR-LA--RIEMKEELKRILFLQKRLYNGLMESI--EEIYINGDMNNRIPHNLNISFNFIEGESLLMAI---KDIAVSS 1713 (2602)
Q Consensus 1642 ~aL~-~~--~~~~~~~~~~~~~l~~~l~~~L~~~~--~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L---~gI~v~~ 1713 (2602)
++|+ .. ...+++.++++.++++++.+.|.+.. .++.+..+.. +....+.+++.+..++...| +||.+++
T Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 397 (430)
T 2x5f_A 321 HVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNS---GYFMAIKVHDVDPEALRKHLIDKYSIGVIA 397 (430)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCB---SSEEEEEESSSCHHHHHHHHHHHHCEECEE
T ss_pred HHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCc---eEEEEeCCCCCCHHHHHHHHHHhCCEEEec
Confidence 7777 32 22345588889999999999997311 3677654322 22344445544556666655 5899887
Q ss_pred ccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1714 GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1714 g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
| . .+++||+++. ++.+++++++++|++.
T Consensus 398 g----~-------------------~~~iRis~~~-~~~e~i~~~~~~l~~~ 425 (430)
T 2x5f_A 398 L----N-------------------ATDIRIAFSC-VEKDDIPHVFDSIAKA 425 (430)
T ss_dssp C----S-------------------SSEEEEEGGG-SCGGGHHHHHHHHHHH
T ss_pred C----C-------------------CCeEEEEEec-CCHHHHHHHHHHHHHH
Confidence 6 1 1789999985 5889999999999873
No 364
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.84 E-value=2.1e-19 Score=236.71 Aligned_cols=334 Identities=15% Similarity=0.134 Sum_probs=227.7
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhcc
Q psy15216 1401 ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK 1480 (2602)
Q Consensus 1401 ~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~ 1480 (2602)
...+.|+.+.+++.+.++..+ ++. ......++|+.++++++.+ ++++|+|+|+|+++++.++.
T Consensus 26 p~~~~p~~~~~a~~~~~~~~~-y~~---------~~~~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~l~~l~----- 88 (424)
T 2po3_A 26 PNRIDRARLYERLDRALDSQW-LSN---------GGPLVREFEERVAGLAGVR--HAVATCNATAGLQLLAHAAG----- 88 (424)
T ss_dssp CCCCCHHHHHHHHHHHHHHTC-CSS---------SCHHHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHHT-----
T ss_pred CCCCChHHHHHHHHHHHhcCC-ccc---------CCHHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcC-----
Confidence 344557788999988886521 221 0134678999999999974 89999999999999999874
Q ss_pred CCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC-CCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhh
Q psy15216 1481 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCR 1559 (2602)
Q Consensus 1481 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~ 1559 (2602)
+||+|++++++|+++...+... |++++.++.++ ++.+|+++|++++++++++|+++| |||...++++|.++|+
T Consensus 89 ~gd~Vlv~~~~~~~~~~~~~~~---G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~~~l~~i~~la~ 162 (424)
T 2po3_A 89 LTGEVIMPSMTFAATPHALRWI---GLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVH---LWGRPCAADQLRKVAD 162 (424)
T ss_dssp CCSEEEEESSSCTHHHHHHHHT---TCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEEC---GGGCCCCHHHHHHHHH
T ss_pred CCCEEEECCCccHHHHHHHHHc---CCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEEC---CCCCcCCHHHHHHHHH
Confidence 6899999999999988766554 99999999886 677999999999999999999865 6999999999999999
Q ss_pred hcCCEEEEecccccCcccccCCCCC--ccEEEEccc--cccCCCceEEEEEe-cCCCCccccccccCCcc-cc-CCCCCc
Q psy15216 1560 SKGVIFHCDAAQAVGKIDINIQNYK--VDLMSFSAH--KIYGPKGIGALYIR-RNPRTRIEAQIHGGGHE-YG-LRSGTL 1632 (2602)
Q Consensus 1560 ~~gi~vivD~a~~~g~~~~~l~~~~--~D~~v~S~~--K~~gp~G~G~l~~~-~~~~~~l~~~~~g~~~~-~~-~~~gt~ 1632 (2602)
+||+++|+|++|+.|.. ++....+ .|++++|+| |.+++..+|+++.+ +++++.+.+....+... .. ...|..
T Consensus 163 ~~~~~li~Dea~~~g~~-~~~~~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~ 241 (424)
T 2po3_A 163 EHGLRLYFDAAHALGCA-VDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTN 241 (424)
T ss_dssp HTTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCB
T ss_pred HcCCEEEEECccccCCe-ECCeecccccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcC
Confidence 99999999999997654 2211111 589999998 65555347999988 56665555433222110 00 011111
Q ss_pred -chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCC--CCCceEEEEEe----cCCcHHHHHh
Q psy15216 1633 -ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN--RIPHNLNISFN----FIEGESLLMA 1705 (2602)
Q Consensus 1633 -~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~--~~~~~~~~~~~----~~~~~~~~~~ 1705 (2602)
.+..+. ...++.. ...++...++..++++++.+.|.+ ++++.+..++.. ..+.++.+.++ +.+..++...
T Consensus 242 ~~~~~~~-aa~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 318 (424)
T 2po3_A 242 AKMSEAA-AAMGLTS-LDAFPEVIDRNRRNHAAYREHLAD-LPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEV 318 (424)
T ss_dssp CCCCHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCS-CTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHH
T ss_pred CCcCHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcc-CCCccccCCCCCCccccEEEEEEECCccchhhHHHHHHH
Confidence 112222 2233322 234667888888999999999987 678888753221 11234445555 2456667666
Q ss_pred c--CCEEEccccccCCCC-CChhHHHHHcC---CC--ccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1706 I--KDIAVSSGSACTSAS-LEPSYVLRALG---CN--DELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1706 L--~gI~v~~g~~~~~~~-~~~~~~~~~~~---~~--~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
| +||.+++ .|.++. ..+.+ ..++ .. .......+|++++.++|.+|+++++++|++.
T Consensus 319 L~~~gI~v~~--~~~~~~~~~~~~--~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~ 382 (424)
T 2po3_A 319 LKAEGVHTRA--YFSPGCHELEPY--RGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLC 382 (424)
T ss_dssp HHHTTEECBC--TTCSCGGGSTTT--TTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred HHHCCCceec--ccCCccccchhh--hhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHH
Confidence 6 7999876 332110 00000 0000 00 0011245999988999999999999999974
No 365
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.84 E-value=6.8e-21 Score=251.13 Aligned_cols=333 Identities=15% Similarity=0.171 Sum_probs=219.5
Q ss_pred CCCCCCCHHHHHHHHHHHhhhc--CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccc
Q psy15216 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF 81 (2602)
Q Consensus 4 a~~~~~p~~v~~a~~~~l~~~~--~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~ 81 (2602)
++..+.++.+.+++.+.+...+ ++|+...+..........+.+++++++++|+++++|++++| ++|+..++.++.
T Consensus 37 ~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sG-s~a~~~a~~~~~-- 113 (420)
T 3gbx_A 37 ASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSG-SQANFAVYTALL-- 113 (420)
T ss_dssp TTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHHHHHHHC--
T ss_pred ccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCc-HHHHHHHHHHhc--
Confidence 4445689999999999885544 45544222222222345566778999999997766666555 889999998887
Q ss_pred cccCCCEEEEcCCCCcccHHHHHHH--HhCCcEEEEeccCCCCccChHHHHhhccC-CceEEEEecccCcccccccHHHH
Q psy15216 82 YKKRGKHIITVQTEHKSVLDSIRKL--ENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEI 158 (2602)
Q Consensus 82 ~~~~gd~Vlv~~~~~~s~~~~~~~~--~~~G~~v~~v~~~~~~~ld~e~l~~~i~~-~tklv~i~~~~npTG~~~~l~~I 158 (2602)
++||+|+++.++|+++...+... ...+.....++.+.++.+|+++|++++++ ++++|++++++|| ...|+++|
T Consensus 114 --~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~l 189 (420)
T 3gbx_A 114 --QPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYS--GVVDWAKM 189 (420)
T ss_dssp --CTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCC--SCCCHHHH
T ss_pred --CCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccC--CccCHHHH
Confidence 89999999999999854333222 12245666666677788999999999986 5999999998885 47899999
Q ss_pred HHHHHhcCCEEEEecccccccc-----cccCCCCCccEEEecccccc-CCCCcEEEEEec---CCCCcccceecCCCccc
Q psy15216 159 GELCRSKGVIFHCDAAQAVGKI-----DINIQNYKVDLMSFSAHKIY-GPKGIGALYIRR---NPRTRIEAQIHGGGHEY 229 (2602)
Q Consensus 159 ~~la~~~g~~livD~a~a~g~~-----~~dl~~~~~D~~~~S~~K~~-Gp~G~G~l~~~~---~~~~~l~~~~~g~~~~~ 229 (2602)
.++|++||+++|+|++|+.+.. +..+. .+|++++|+||.+ ||.| |+++.++ ++.+.+.+....
T Consensus 190 ~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~~~~~----- 261 (420)
T 3gbx_A 190 REIADSIGAYLFVDMAHVAGLIAAGVYPNPVP--HAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNSAVFP----- 261 (420)
T ss_dssp HHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT--TSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHHHHC------
T ss_pred HHHHHHcCCEEEEECCcchhceecccCCcccc--cCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhhhcCC-----
Confidence 9999999999999999876543 22222 3789999999966 7886 9999987 444444332211
Q ss_pred cccccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--cChhHH
Q psy15216 230 GLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESL 306 (2602)
Q Consensus 230 ~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~--~~~~~~ 306 (2602)
...++++...+.++..++.. ...++++..++..++++++.+.|.+ .++.+..+... ...+.+.++. .+...+
T Consensus 262 -~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 336 (420)
T 3gbx_A 262 -SAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN--RGYKVVSGGTE--NHLFLLDLVDKNLTGKEA 336 (420)
T ss_dssp ----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSCS--SSEEEEECGGGTCCHHHH
T ss_pred -CCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh--cCCeeccCCCC--CeEEEEEcCCCCCCHHHH
Confidence 11346666777776666653 2355688899999999999999987 68887653221 2334444432 344555
Q ss_pred HHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCC----CCHHHHHHHHHHHHhh
Q psy15216 307 LMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 307 ~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~----~t~edid~li~~L~~~ 369 (2602)
...| +||.+++....... + .......+||++... .+++++++++++|++.
T Consensus 337 ~~~l~~~gi~v~~~~~~~~~-----------~--~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~ 392 (420)
T 3gbx_A 337 DAALGRANITVNKNSVPNDP-----------K--SPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDV 392 (420)
T ss_dssp HHHHHHTTEECEEECCTTCS-----------S--CTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCcEeccccCCCCc-----------c--ccCCCcceEEecchhcccCCCHHHHHHHHHHHHHH
Confidence 5555 69999873221100 0 001125699998644 3589999999999874
No 366
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.84 E-value=2.7e-20 Score=242.16 Aligned_cols=298 Identities=13% Similarity=0.093 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHH-HhCCcEEEEeccC
Q psy15216 1437 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPK 1515 (2602)
Q Consensus 1437 ~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~~~ 1515 (2602)
....++|+.+++++|.+ +.++++ ++++|++.++. +. ++||+|+++++.|+++...+..+ +..|+++++++.+
T Consensus 67 p~~~~l~~~la~~~g~~-~~i~~~-sG~~ai~~~~~-l~----~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 139 (403)
T 3cog_A 67 PTRNCLEKAVAALDGAK-YCLAFA-SGLAATVTITH-LL----KAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCS 139 (403)
T ss_dssp HHHHHHHHHHHHHHTCS-EEEEES-CHHHHHHHHHT-TS----CTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred chHHHHHHHHHHHhCCC-cEEEEC-CHHHHHHHHHH-Hh----CCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC
Confidence 34688999999999976 455555 55799999988 65 89999999999999877665433 5569999999865
Q ss_pred CCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcC-CEEEEecccccCcccccCCCCCccEEEEcccc
Q psy15216 1516 NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG-VIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 1594 (2602)
Q Consensus 1516 ~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~g-i~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K 1594 (2602)
|+++++++++++|++|++++|+||||.+.|+++|.++|++|| +++++|++|+.+....++ .+++|+++.|+||
T Consensus 140 -----d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~-~~~~div~~S~sK 213 (403)
T 3cog_A 140 -----KIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPL-ALGADISMYSATK 213 (403)
T ss_dssp -----SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTT-TTTCSEEEEETTT
T ss_pred -----CHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCcc-ccCCeEEEEcChh
Confidence 899999999999999999999999999999999999999999 999999999887533333 2679999999999
Q ss_pred ccC-CCc--eEEEEEe-cCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15216 1595 IYG-PKG--IGALYIR-RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLM 1670 (2602)
Q Consensus 1595 ~~g-p~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~ 1670 (2602)
++| +.| +|+++++ +++.+.+.+...++ .++.+....+++..+++.+. ...++..+.+..+.+.+.
T Consensus 214 ~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~-------g~~~~~~~~~~~~~~l~~l~----~r~~~~~~n~~~l~~~l~ 282 (403)
T 3cog_A 214 YMNGHSDVVMGLVSVNCESLHNRLRFLQNSL-------GAVPSPIDCYLCNRGLKTLH----VRMEKHFKNGMAVAQFLE 282 (403)
T ss_dssp TTTCSSCCCCEEEEECCHHHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHTTHH----HHHHHHHHHHHHHHHHHH
T ss_pred hccCCCCCeEEEEEECcHHHHHHHHHHHHhc-------CCCCCHHHHHHHHhhhhHHH----HHHHHHHHHHHHHHHHHh
Confidence 554 555 4999986 45555555433221 12344444444445555332 233334444444555554
Q ss_pred hcCCcE--------------EEeCCCCCCCCceEEEEEecCC--cHHHHHhcCCEEEc---ccc------ccCCCC--CC
Q psy15216 1671 ESIEEI--------------YINGDMNNRIPHNLNISFNFIE--GESLLMAIKDIAVS---SGS------ACTSAS--LE 1723 (2602)
Q Consensus 1671 ~~~~gl--------------~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~gI~v~---~g~------~~~~~~--~~ 1723 (2602)
+ .+.+ .+..+.......+..+.+++.. ...++.. .+|.++ .|. +|.... ..
T Consensus 283 ~-~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~l~~-~~i~~~~~s~G~~~sl~~~p~~~~~~~~ 360 (403)
T 3cog_A 283 S-NPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKN-LKLFTLAESLGGFESLAELPAIMTHASV 360 (403)
T ss_dssp T-CTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHH-CSSSEECSCCSSSSCEEECTTTTTTTTS
T ss_pred c-CCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHHHHHHHHh-CCcceEccCCCCcceeeecccccccccC
Confidence 4 2222 1111111112344444443221 1233333 355332 232 232211 22
Q ss_pred hhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1724 PSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1724 ~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
+......+|.. .++||||++.++++++|+++.++|++
T Consensus 361 ~~~~~~~~g~~----~~~iRlSvg~e~~~d~i~~l~~al~~ 397 (403)
T 3cog_A 361 LKNDRDVLGIS----DTLIRLSVGLEDEEDLLEDLDQALKA 397 (403)
T ss_dssp CHHHHHHHTCC----TTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred CHHHHHhcCCC----cCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 34455566764 38999999999999999999999986
No 367
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.84 E-value=2.9e-20 Score=243.09 Aligned_cols=315 Identities=14% Similarity=0.104 Sum_probs=217.6
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHH--hC-CCCCcEEEeCCHHHHHHHHHHhhhhhhc
Q psy15216 1403 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQL--IY-ADPREIIWTSGATESNNLAIKGAAHFYK 1479 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~--~g-~~~~~iv~t~gaT~al~~al~~l~~~~~ 1479 (2602)
.+.++.+.+++.+.++..........|.. .....++|++++++ +| +++++|++|+|+++++..++ .+.
T Consensus 45 ~~~~~~v~~a~~~~~~~~~~~~~~~~y~~----~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~-~~~---- 115 (400)
T 3asa_A 45 QPLNASVAEAFASSIARLSSPTTCRGYGP----DFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLL-SFF---- 115 (400)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSSCCCCCCC----TTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHH-HHH----
T ss_pred CCCCHHHHHHHHHHHhcccccccccCCCC----CCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHH-HHc----
Confidence 35678899999988865321111101110 12356889999999 57 67889999999999999865 343
Q ss_pred cCCCEEEEcCCCCcchHHHHHHHHhCCcE-EEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccC---hHHHH
Q psy15216 1480 KRGKHIITVQTEHKSVLDSIRKLENDGFR-VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIG 1555 (2602)
Q Consensus 1480 ~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~-v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~---l~~I~ 1555 (2602)
++||+|+++.|+|+++...+... |.+ ++.++.++++.++.+ +++ + +++++|++++|+||||.++| +++|+
T Consensus 116 ~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~-l~~-~-~~~~~v~l~~p~nptG~~~~~~~l~~l~ 189 (400)
T 3asa_A 116 GPNQTVAIQDPSYPAYLDIARLT---GAKEIIALPCLQENAFFPE-FPE-D-THIDILCLCSPNNPTGTVLNKDQLRAIV 189 (400)
T ss_dssp CSSCEEEEEESCCHHHHHHHHHT---TCSEEEEEECCGGGTTCCC-CCT-T-CCCSEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CCCCEEEECCCCcHHHHHHHHHc---CCcceEecccchhcCcccC-hhh-c-cCccEEEEeCCCCCCCCcCCHHHHHHHH
Confidence 68999999999999987665444 887 888987653322221 222 1 67899999999999999998 56788
Q ss_pred HHhhhcCCEEEEecccc-c---CcccccCCCC----CccEEEEccccccCCCc--eEEEEEecCCC-------Ccccccc
Q psy15216 1556 ELCRSKGVIFHCDAAQA-V---GKIDINIQNY----KVDLMSFSAHKIYGPKG--IGALYIRRNPR-------TRIEAQI 1618 (2602)
Q Consensus 1556 ~ia~~~gi~vivD~a~~-~---g~~~~~l~~~----~~D~~v~S~~K~~gp~G--~G~l~~~~~~~-------~~l~~~~ 1618 (2602)
++|++||+++|+|++|+ + +..+.++..+ +.++++.|+||.+|++| +||+++++++. ..+....
T Consensus 190 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~ 269 (400)
T 3asa_A 190 HYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERF 269 (400)
T ss_dssp HHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHH
T ss_pred HHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHH
Confidence 89999999999999997 3 2222333322 23588999999888778 79999988763 2221100
Q ss_pred ccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEE-Ee-c
Q psy15216 1619 HGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNIS-FN-F 1696 (2602)
Q Consensus 1619 ~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~-~~-~ 1696 (2602)
.....++.+.+.+.++..+|+.. ++++.++++.++++++.+.|.+ . ++.+..+.. .....+. ++ .
T Consensus 270 ------~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~~~~~ 336 (400)
T 3asa_A 270 ------LSTTFNGASIPAQEAGVAGLSIL--PQLEAIHYYRENSDLLRKALLA-T-GFEVFGGEH---APYLWVKPTQAN 336 (400)
T ss_dssp ------HHHHCCCCCHHHHHHHHHHHHHT--TTCHHHHHHHHHHHHHHHHHHH-T-TCEEEECSS---SSEEEEECCCTT
T ss_pred ------hccCccCCChHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHH-C-CCeeeCCCC---ceEEEEeccCCC
Confidence 01112456666666666666532 4677888889999999999987 3 676654322 2233344 33 2
Q ss_pred CCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1697 IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1697 ~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.+..++...| +||.+++|..|... ..+++||++ +++.+++++++++|++
T Consensus 337 ~~~~~~~~~l~~~~gv~v~~g~~f~~~-----------------~~~~iRis~--~~~~e~i~~~l~~l~~ 388 (400)
T 3asa_A 337 ISDRDLFDFFLREYHIAITPGIGFGRS-----------------GSGFVRFSS--LGKREDILAACERLQM 388 (400)
T ss_dssp CCTTTHHHHHHHHHSEECEEGGGGCGG-----------------GTTCEEEEC--CSCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhCCEEEeChhHhCCC-----------------CCCEEEEEe--eCCHHHHHHHHHHHHH
Confidence 2344555544 49999999877531 137899994 5799999999999986
No 368
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.84 E-value=1.7e-19 Score=235.32 Aligned_cols=308 Identities=16% Similarity=0.167 Sum_probs=220.7
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccc------c
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF------Y 82 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~------~ 82 (2602)
.+|.+.+++.+.+......... ...+..+++++++++++| ++++++++|+++|++.++.++... .
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~~~l~~~la~~~g--~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~ 123 (392)
T 3ruy_A 53 RHPKIINALIDQANRVTLTSRA-------FHSDQLGPWYEKVAKLTN--KEMVLPMNTGAEAVETAIKTARRWAYDVKKV 123 (392)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTT-------SEETTHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHhccccccc-------cCCHHHHHHHHHHHHhcC--CCEEEEeCcHHHHHHHHHHHHHHhhhhccCC
Confidence 5799999999988653221111 112357889999999998 569999999999999999977611 0
Q ss_pred ccCCCEEEEcCCCCcccHHHHHHHHhC-C---------cEEEEeccCCCCccChHHHHhhccCCceEEEEecccCccccc
Q psy15216 83 KKRGKHIITVQTEHKSVLDSIRKLEND-G---------FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVI 152 (2602)
Q Consensus 83 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~-G---------~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~ 152 (2602)
...+|+|++..+.|++....+..+... + ..+..++. .|+++|++++++++++|++++++||||.+
T Consensus 124 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~~~~nptG~~ 198 (392)
T 3ruy_A 124 EANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-----GDLEALKAAITPNTAAFILEPIQGEAGIN 198 (392)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-----TCHHHHHHHCCTTEEEEEECSSBSTTTSB
T ss_pred CCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-----ccHHHHHHHhccCeEEEEEeCccCCCCCc
Confidence 023679999999998876555443111 0 11333332 28999999999999999999999999999
Q ss_pred cc----HHHHHHHHHhcCCEEEEecccc-ccc----ccccCCCCCccEEEeccccccCC--CCcEEEEEecCCCCcccce
Q psy15216 153 QP----ILEIGELCRSKGVIFHCDAAQA-VGK----IDINIQNYKVDLMSFSAHKIYGP--KGIGALYIRRNPRTRIEAQ 221 (2602)
Q Consensus 153 ~~----l~~I~~la~~~g~~livD~a~a-~g~----~~~dl~~~~~D~~~~S~~K~~Gp--~G~G~l~~~~~~~~~l~~~ 221 (2602)
+| +++|.++|++||+++|+|++|+ ++. ...+.....+|++++ +|.+++ ..+|++++++++++.+.+.
T Consensus 199 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~--SK~l~gG~~~~G~~~~~~~~~~~~~~~ 276 (392)
T 3ruy_A 199 IPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYIL--GKALGGGVFPISCAAANRDILGVFEPG 276 (392)
T ss_dssp CCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTTSCCEEEEECHHHHTTCCTT
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEE--chhhhCChhhhEEEEECHHHHhhhccC
Confidence 99 9999999999999999999995 332 122223345687755 595433 2379999998877777654
Q ss_pred ecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc-CceEEeCCCCCCCCceEEEEEcc
Q psy15216 222 IHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESI-EEIYINGDMNNRIPHNLNISFNF 300 (2602)
Q Consensus 222 ~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~-~g~~l~~~~~~~~~~~~~~~~~~ 300 (2602)
..+ ...+++....+++.++++.... ++..++.+++++++.+.|.+.. +.+....+. ..++.+.++.
T Consensus 277 ~~~-------~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----g~~~~~~~~~ 343 (392)
T 3ruy_A 277 SHG-------STFGGNPLACAVSIAALEVLEE--EKLTERSLQLGEKLVGQLKEIDNPMITEVRGK----GLFIGIELNE 343 (392)
T ss_dssp SSC-------CSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEE----TTEEEEEESS
T ss_pred CcC-------CCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHhcCCCceEEEee----eeEEEEEEcc
Confidence 321 1336677777777788875443 6778889999999999997721 334333221 2344444554
Q ss_pred cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 301 IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 301 ~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+..++...| +||.++++. .+++|++++..++++|+++++++|++.
T Consensus 344 -~~~~l~~~l~~~gi~v~~~~-----------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~ 390 (392)
T 3ruy_A 344 -PARPYCEQLKAAGLLCKETH-----------------------ENVIRIAPPLVISEEDLEWAFQKIKAV 390 (392)
T ss_dssp -CSHHHHHHHHTTTEECCCBT-----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHCCcEEecCC-----------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 667777777 789887553 278999999999999999999999863
No 369
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.84 E-value=4.3e-20 Score=243.09 Aligned_cols=293 Identities=12% Similarity=0.070 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCCHHHHH--HHHHHhhhhhhccC------------CCEEEEcCCCCcchHHHHHHHHh
Q psy15216 1439 IEKARNEVAQLIYADPREIIWTSGATESN--NLAIKGAAHFYKKR------------GKHIITVQTEHKSVLDSIRKLEN 1504 (2602)
Q Consensus 1439 ~~~lr~~ia~~~g~~~~~iv~t~gaT~al--~~al~~l~~~~~~~------------gd~Vlv~~~~~~s~~~~~~~~~~ 1504 (2602)
..++|+++++++++++++|++|+|+++++ .+++.++. ++ +|+|++++|+|+++...++..
T Consensus 78 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~----~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~-- 151 (422)
T 3d6k_A 78 IADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYT----WGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHF-- 151 (422)
T ss_dssp CHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHH----HCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHH--
T ss_pred CHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhc----CcccccccccccCCCCEEEEeCCccHHHHHHHHHc--
Confidence 56899999999999999999999999997 67777765 33 358999999999998777766
Q ss_pred CCcEEEEeccCCCCCcChhHHHhhccC-CceEEE-EeccccccccccChH---HHHHHhh-hcCCEEEEeccccc---Cc
Q psy15216 1505 DGFRVTYLKPKNNGLITLSQLEEKICS-DTILVS-VMLVNNEIGVIQPIL---EIGELCR-SKGVIFHCDAAQAV---GK 1575 (2602)
Q Consensus 1505 ~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~-l~~~~n~tG~~~~l~---~I~~ia~-~~gi~vivD~a~~~---g~ 1575 (2602)
|++++.++.++++ +|+++|++++++ ++++|+ +++++||||.++|.+ +|.++|+ +||+++|+|++|+. ..
T Consensus 152 -g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~ 229 (422)
T 3d6k_A 152 -GFEMINVPMTDEG-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSD 229 (422)
T ss_dssp -TCEEEEEEEETTE-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSS
T ss_pred -CCEEEecCCCCCC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCC
Confidence 9999999987765 999999999986 789888 799999999999966 8888888 99999999999973 11
Q ss_pred c---cccC-------CCCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHH
Q psy15216 1576 I---DINI-------QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEA 1643 (2602)
Q Consensus 1576 ~---~~~l-------~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~a 1643 (2602)
. ..++ ...+.++++.|+||. +.+| +||+++++++++.+..... ....+.+...+.++..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~l~~~l~~~~~-------~~~~~~~~~~q~a~~~~ 301 (422)
T 3d6k_A 230 EFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSKENIEWYASHAN-------VRGIGPNKLNQLAHAQF 301 (422)
T ss_dssp CCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCHHHHHHHHHHHH-------HHCSCCCHHHHHHHHHH
T ss_pred CCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCHHHHHHHHHHHH-------hhcCCCCHHHHHHHHHH
Confidence 0 1122 233567889999997 3345 8999998876665554321 11234555666666666
Q ss_pred HHH---HHHHHHHHHHHHHHHHHHHHHHHhhcC---CcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEcc-c
Q psy15216 1644 FRL---ARIEMKEELKRILFLQKRLYNGLMESI---EEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSS-G 1714 (2602)
Q Consensus 1644 L~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~---~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~-g 1714 (2602)
|+. ....+++.++++++.++++.+.|.+.+ +++.+..+.. .....+.++..+...+...| +||.+++ |
T Consensus 302 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~l~~~gV~v~~~g 378 (422)
T 3d6k_A 302 FGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTG---GYFISVDVVPGTASRVVELAKEAGIALTGAG 378 (422)
T ss_dssp HCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSB---SSCEEEEESTTCHHHHHHHHHHTTEECCCTT
T ss_pred HhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCc---ceEEEEECCCCCHHHHHHHHHHCCeEEEcCc
Confidence 653 124466667777777777777775422 2356543322 22344445433344555555 8999998 4
Q ss_pred cccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1715 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
..|... . ....+++|||++. ++.+++++++++|++.
T Consensus 379 ~~f~~~------------~--~~~~~~iRis~~~-~~~e~i~~~~~~l~~~ 414 (422)
T 3d6k_A 379 SSFPLH------------N--DPNNENIRLAPSL-PPVAELEVAMDGFATC 414 (422)
T ss_dssp TTSGGG------------C--CTTSCEEEECCSS-SCHHHHHHHHHHHHHH
T ss_pred cccCCC------------C--CCCCCeEEEecCC-CCHHHHHHHHHHHHHH
Confidence 445311 0 0113789999997 8999999999999973
No 370
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.84 E-value=1.1e-20 Score=247.18 Aligned_cols=315 Identities=13% Similarity=0.082 Sum_probs=214.6
Q ss_pred CCCCCCCCCHHHHHHHHH-HHhhh--cCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC------CCC--cEEEeCCHHHH
Q psy15216 2 DYSATTPIDPRVVDKMIP-YLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLIYA------DPR--EIIWTSGATES 70 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~-~l~~~--~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~------~~~--~Iv~t~g~T~a 70 (2602)
|+.+.+|.++.+.+++.+ .+... ..++. .....++|+.++++++. +++ +|++|+|+|+|
T Consensus 38 d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~----------~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a 107 (397)
T 3fsl_A 38 NEDGIIPQLQAVAEAEARLNAQPHGASLYLP----------MEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGA 107 (397)
T ss_dssp CTTSCCCCCHHHHHHHHHHHHSCCCCCCCCC----------TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHH
T ss_pred CCCCCccCcHHHHHHHHhhccCccccccCCC----------CCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHH
Confidence 556667778999999998 77531 11211 11245678888888753 567 89999999999
Q ss_pred HHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEecc--CCCCccChHHHHhhcc---CCceEEEEecc
Q psy15216 71 NNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP--KNNGLITLSQLEEKIC---SDTILVSVMLV 145 (2602)
Q Consensus 71 l~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~--~~~~~ld~e~l~~~i~---~~tklv~i~~~ 145 (2602)
+++++..+. .+++||+|+++.|.|+++...++.. |++++.++. ++++.+|+++++++++ ++++++++++|
T Consensus 108 ~~~~~~~~~--~~~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p 182 (397)
T 3fsl_A 108 LKVGADFLK--RYFPESGVWVSDPTWENHVAIFAGA---GFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCC 182 (397)
T ss_dssp HHHHHHHHH--HHCTTCCEEEESSCCHHHHHHHHHT---TCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSS
T ss_pred HHHHHHHHH--hcCCCCeEEEeCCCchhHHHHHHHc---CCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCC
Confidence 999964322 1279999999999999987666554 999999998 4578899999999998 67899999999
Q ss_pred cCcccccccHH---HHHHHHHhcCCEEEEeccccccccc-----c---cC-CCCCccEEEeccccccCCCC--cEEEEEe
Q psy15216 146 NNEIGVIQPIL---EIGELCRSKGVIFHCDAAQAVGKID-----I---NI-QNYKVDLMSFSAHKIYGPKG--IGALYIR 211 (2602)
Q Consensus 146 ~npTG~~~~l~---~I~~la~~~g~~livD~a~a~g~~~-----~---dl-~~~~~D~~~~S~~K~~Gp~G--~G~l~~~ 211 (2602)
+||||.+++.+ +|+++|++||+++|+|++|+..... . .+ ...+..+++.|+||.+|++| +||+++.
T Consensus 183 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~ 262 (397)
T 3fsl_A 183 HNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVM 262 (397)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEE
T ss_pred CCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEe
Confidence 99999998755 8889999999999999998654321 1 11 12334688889999999888 7999864
Q ss_pred cC---CCCcccceecCCCccccccccCcchhHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHHhhccC--ce
Q psy15216 212 RN---PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL------ARIEMKEELKRILFLQKRLYNGLMESIE--EI 280 (2602)
Q Consensus 212 ~~---~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~------~~~~~~~~~~~~~~l~~~l~~~L~~~~~--g~ 280 (2602)
.. .+..+...... ..+...++++.....++..++.. ...++++.+++++++++++.+.|.+..+ ++
T Consensus 263 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 339 (397)
T 3fsl_A 263 CEDAEAAGRVLGQLKA---TVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNF 339 (397)
T ss_dssp CSSHHHHHHHHHHHHH---HHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCC
T ss_pred cCCHHHHHHHHHHHHH---HHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 32 22222111000 00011234455555555455542 1345778889999999999999987322 44
Q ss_pred EEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHH
Q psy15216 281 YINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 358 (2602)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~ed 358 (2602)
.+..+... .+.+...+...+...+ +||.+++| + ||+++..+ +++
T Consensus 340 ~~~~~~~~------~~~~~~~~~~~~~~~l~~~gi~v~~g-------------------------~--Ris~~~~~-~~~ 385 (397)
T 3fsl_A 340 DYLLNQRG------MFSYTGLSAAQVDRLREEFGVYLIAS-------------------------G--RMCVAGLN-TAN 385 (397)
T ss_dssp THHHHCCS------SEEECCCCHHHHHHHHHTTCEECCTT-------------------------C--EEEGGGCC-TTT
T ss_pred eeecCCce------EEEecCCCHHHHHHHHHhCCEEECCC-------------------------C--eEEEEecC-Hhh
Confidence 44322211 1233334444444444 68888633 2 99997554 477
Q ss_pred HHHHHHHHHh
Q psy15216 359 IDFTIKLLKM 368 (2602)
Q Consensus 359 id~li~~L~~ 368 (2602)
+++++++|++
T Consensus 386 i~~~~~~l~~ 395 (397)
T 3fsl_A 386 VQRVAKAFAA 395 (397)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999985
No 371
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.83 E-value=4.4e-20 Score=242.53 Aligned_cols=316 Identities=15% Similarity=0.049 Sum_probs=215.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHh-hhcCCCCCCCcchhhhHHHHHHHHHHHHHHHh-CC-CCC---cEEEeCCHHHHHHHHH
Q psy15216 2 DYSATTPIDPRVVDKMIPYLR-VQFGNPASRNHIYGWTAEKAIEKARNEVAQLI-YA-DPR---EIIWTSGATESNNLAI 75 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~-~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~-g~-~~~---~Iv~t~g~T~al~~~~ 75 (2602)
|+.+..++++.+.+++.+... ....++.. ....++|+.+++++ +. .++ +|++|+|+++|+++++
T Consensus 49 ~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~----------~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 118 (413)
T 3t18_A 49 DDKGKIIALPSVYDRLDEMDRSHIASYAPI----------EGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAI 118 (413)
T ss_dssp CTTSCBCCCHHHHHHHHHSCHHHHHSCCCT----------TCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHH
T ss_pred CCCCCcCChHHHHHHHHhcCcccccCcCCC----------CCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHH
Confidence 444556788888888876432 12223221 01345566666654 22 144 8999999999999999
Q ss_pred HhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEecc-CCCCccChHHHHhhccC----Cce-EEEEecc-cCc
Q psy15216 76 KGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP-KNNGLITLSQLEEKICS----DTI-LVSVMLV-NNE 148 (2602)
Q Consensus 76 ~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~-~~~~~ld~e~l~~~i~~----~tk-lv~i~~~-~np 148 (2602)
.++. ++||+|+++.|.|+++...+... |++++.++. ++++.+|+++|++++++ +++ ++++++| +||
T Consensus 119 ~~~~----~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NP 191 (413)
T 3t18_A 119 FSYL----DEGDPLICHDYYWAPYRKICEEF---GRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNP 191 (413)
T ss_dssp HHHC----CSSCEEEEESSCCTHHHHHHHHH---TCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTT
T ss_pred HHhc----CCCCEEEECCCCcccHHHHHHHh---CCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCC
Confidence 9987 89999999999999988877766 999999998 44568999999999975 777 8889999 999
Q ss_pred ccccccHHHHH---HHHH------hcCCEEEEecccccccc------cc--cCCCCCcc---EEEeccccccCCCC--cE
Q psy15216 149 IGVIQPILEIG---ELCR------SKGVIFHCDAAQAVGKI------DI--NIQNYKVD---LMSFSAHKIYGPKG--IG 206 (2602)
Q Consensus 149 TG~~~~l~~I~---~la~------~~g~~livD~a~a~g~~------~~--dl~~~~~D---~~~~S~~K~~Gp~G--~G 206 (2602)
||.++|.+++. ++|+ +||+++|+|++|..... ++ .....+.+ +++.|+||.+|++| +|
T Consensus 192 tG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG 271 (413)
T 3t18_A 192 TGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSG 271 (413)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCE
T ss_pred CCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcE
Confidence 99999976655 5555 89999999999742111 11 11122223 77789999999888 89
Q ss_pred EEEE---ecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHHHhhccC
Q psy15216 207 ALYI---RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA-----RIEMKEELKRILFLQKRLYNGLMESIE 278 (2602)
Q Consensus 207 ~l~~---~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-----~~~~~~~~~~~~~l~~~l~~~L~~~~~ 278 (2602)
|+++ ++++++.+....... ......+++..+..++..+++.. ....++.++++.++++++.+.|.+ .
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~- 346 (413)
T 3t18_A 272 AAVGISSSKEIIEEFEASLAHS---ARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKE-N- 346 (413)
T ss_dssp EEEEEESCHHHHHHHHHHHHHH---HHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-
T ss_pred EEEEecCCHHHHHHHHHHHHHh---hhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-c-
Confidence 9998 777666665432100 00001235666666665665422 233556778888889999999987 3
Q ss_pred ceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCH
Q psy15216 279 EIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTE 356 (2602)
Q Consensus 279 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~ 356 (2602)
|+.+..+... . +++++..+..++...| +||.+++|. +++||+++..+++
T Consensus 347 g~~~~~~~~~---~--~~~~~~~~~~~~~~~l~~~gv~v~~g~------------------------~~iRis~~~~~~~ 397 (413)
T 3t18_A 347 KLTMIPYFGG---F--FTFIPTDKAFDIVKDLEKENIFTIPSA------------------------KGIRVAICGVGEE 397 (413)
T ss_dssp TCCCBCCCSS---S--CEEEECSCHHHHHHHHHHTTEECEECS------------------------SEEEECTTTSCGG
T ss_pred CCCccCCCce---E--EEEeCCCCHHHHHHHHHhCCEEEecCC------------------------CceEEEEeeCCHH
Confidence 6666544322 1 2233445666776666 799998751 6899999866665
Q ss_pred HHHHHHHHHHHh
Q psy15216 357 KEIDFTIKLLKM 368 (2602)
Q Consensus 357 edid~li~~L~~ 368 (2602)
+.++++.++|++
T Consensus 398 ~~l~~l~~~l~~ 409 (413)
T 3t18_A 398 KIPKLVQRLAFY 409 (413)
T ss_dssp GHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555553
No 372
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.83 E-value=7.7e-21 Score=202.13 Aligned_cols=122 Identities=44% Similarity=0.680 Sum_probs=111.9
Q ss_pred CCceeeeccccccceEeeeccEEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCC
Q psy15216 1005 DDNFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPM 1084 (2602)
Q Consensus 1005 ~~~~~~~dv~~~~~gi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~ 1084 (2602)
.+++.+.|++|++||+++.++.|.++|+||++||+++++.|+|..|||+.+.|.|||||+..+.+|..||+|.|+++||.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEEEEEEECCCeeEEEEEEEecCCceEEEEEecCCCC
Q psy15216 1085 PAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNM 1126 (2602)
Q Consensus 1085 ~~g~~~i~v~f~~d~~g~l~v~a~~~~~g~~~~~~~~~~~~l 1126 (2602)
|+|.++|+|+|+||.||+|+|+|+++.||++..++|..+.+|
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~l 135 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGL 135 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSCCC
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecCCCC
Confidence 999999999999999999999999999999999999987654
No 373
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.83 E-value=4.2e-20 Score=239.86 Aligned_cols=298 Identities=13% Similarity=0.101 Sum_probs=205.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHH-HHhCCcEEEEecc
Q psy15216 1436 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKP 1514 (2602)
Q Consensus 1436 ~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~~ 1514 (2602)
.....++++++++++|.+ ++++++|+++|+..++.++. ++||+|+++.+.|+++...+.. +...|+++++++.
T Consensus 58 ~~~~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~~~~----~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 131 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGAA--GSAAFGSGMGAISSSTLAFL----QKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT 131 (389)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHTTTC----CTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred ChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHh----CCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC
Confidence 346789999999999976 67777888999999998876 7999999999999998776644 4566999999986
Q ss_pred CCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccc
Q psy15216 1515 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 1594 (2602)
Q Consensus 1515 ~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K 1594 (2602)
.|+++++++++++|++|++++|+||||.+.|+++|.++|++||+++|+|++|+.+.....+ .+++|+++.|+||
T Consensus 132 -----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~-~~~~di~~~S~sK 205 (389)
T 3acz_A 132 -----SDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPL-ELGADIALHSVSK 205 (389)
T ss_dssp -----TCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGG-GTTCSEEEEETTT
T ss_pred -----CCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCcc-ccCCeEEEECChh
Confidence 3899999999999999999999999999999999999999999999999999876532222 2578999999999
Q ss_pred cc-CCCc--eEEEEEec-CCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15216 1595 IY-GPKG--IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLM 1670 (2602)
Q Consensus 1595 ~~-gp~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~ 1670 (2602)
++ |+.+ .|++++++ ++++.+.+....+ .++.+....+++..+++. +....++..+.++.+.+.|.
T Consensus 206 ~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~-------g~~~~~~~~~~~~~~l~~----l~~r~~~~~~~~~~l~~~l~ 274 (389)
T 3acz_A 206 YINGHGDVIGGVSSAKTAEDIATIKFYRKDA-------GSLMAPMDAFLCARGMKT----LPIRMQIHMENGLKVAKFLE 274 (389)
T ss_dssp TTTCSSCCCCEEEEESSHHHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCCCceeEEEEECcHHHHHHHHHHHHhc-------CCCCCHHHHHHHHcCccH----HHHHHHHHHHHHHHHHHHHH
Confidence 55 4555 49999998 7666665433111 122333333333344432 23334455556666666666
Q ss_pred hcCCcEEEe-CCC--C-----------CCCCceEEEEEecCCcHHHHHhc--CCEEEcc---c------cccCCCC--CC
Q psy15216 1671 ESIEEIYIN-GDM--N-----------NRIPHNLNISFNFIEGESLLMAI--KDIAVSS---G------SACTSAS--LE 1723 (2602)
Q Consensus 1671 ~~~~gl~i~-~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~---g------~~~~~~~--~~ 1723 (2602)
+ .+.+.-. .+. . .....+..|.+++ .......+ .++.++. | .+|.... ..
T Consensus 275 ~-~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~ 351 (389)
T 3acz_A 275 Q-HEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS--FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAV 351 (389)
T ss_dssp H-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSS
T ss_pred c-CCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC--HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccC
Confidence 5 3433221 110 0 1123444555543 33333333 4665554 4 4453321 23
Q ss_pred hhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 1724 PSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 1763 (2602)
Q Consensus 1724 ~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~ 1763 (2602)
+......+|+++ ++||+|++.+++++.++.+.++|+
T Consensus 352 ~~~~~~~~g~~~----~~iRlsvg~~~~~~li~~l~~al~ 387 (389)
T 3acz_A 352 PENIMRKQGITP----ELVRISVGIENVDDIIADLKQALE 387 (389)
T ss_dssp CHHHHHHHTCCT----TEEEEECCSSCHHHHHHHHHHHHT
T ss_pred CHHHHHhcCCCc----CeEEEEeccCCHHHHHHHHHHHHh
Confidence 344556667653 899999999888888888877775
No 374
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.83 E-value=1.3e-19 Score=235.54 Aligned_cols=299 Identities=14% Similarity=0.102 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHH-HHhCCcEEEEec
Q psy15216 1435 AEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLK 1513 (2602)
Q Consensus 1435 ~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v~ 1513 (2602)
......++++++++++|. +++++++|+++|+..++.++. ++||+|+++++.|+++...+.. +...|+++++++
T Consensus 79 ~~p~~~~l~~~la~~~g~--~~~~~~~sG~~Ai~~al~~l~----~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 152 (414)
T 3ndn_A 79 GNPTVSVFEERLRLIEGA--PAAFATASGMAAVFTSLGALL----GAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVD 152 (414)
T ss_dssp CCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTC----CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred CChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHh----CCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeC
Confidence 345678999999999996 478999999999999999886 8999999999999998777654 345699999998
Q ss_pred cCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccc
Q psy15216 1514 PKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAH 1593 (2602)
Q Consensus 1514 ~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~ 1593 (2602)
.+ |+++|+++++++|++|++++|+||||.+.|+++|.++|++||+++|+|++|+.+.....+ .+++|+++.|+|
T Consensus 153 ~~-----d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~g~div~~S~s 226 (414)
T 3ndn_A 153 GD-----DLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF-PLGVDVVVYSGT 226 (414)
T ss_dssp TT-----CHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG-GGTCSEEEEETT
T ss_pred CC-----CHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCCeEeccCC
Confidence 75 899999999999999999999999999999999999999999999999999876543333 467899999999
Q ss_pred cccCCCc---eEEEEEecCCCC-ccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 1594 KIYGPKG---IGALYIRRNPRT-RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGL 1669 (2602)
Q Consensus 1594 K~~gp~G---~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L 1669 (2602)
|++|+.| +|+++.+++.+. .+..... ...++.+....+.+...++ .+....++..+.++++.+.|
T Consensus 227 K~l~~~G~~~~G~vv~~~~~~~~~l~~~~~-------~~g~~~~~~~a~~~~~~l~----~l~~r~~~~~~~a~~l~~~L 295 (414)
T 3ndn_A 227 KHIDGQGRVLGGAILGDREYIDGPVQKLMR-------HTGPAMSAFNAWVLLKGLE----TLAIRVQHSNASAQRIAEFL 295 (414)
T ss_dssp TTTTCSSCCCCEEEEECHHHHTTHHHHHHH-------HHCCCCCHHHHHHHHHHGG----GHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCceEEEEEECHHHHHHHHHHHHH-------HcCCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 9888777 699999876554 3432211 0012222222222212222 24555667778888888888
Q ss_pred hhcCCcEEEeCCCC---C-----------CCCceEEEEEecC------CcHHHHHhc--CCEEEccccccCC--------
Q psy15216 1670 MESIEEIYINGDMN---N-----------RIPHNLNISFNFI------EGESLLMAI--KDIAVSSGSACTS-------- 1719 (2602)
Q Consensus 1670 ~~~~~gl~i~~~~~---~-----------~~~~~~~~~~~~~------~~~~~~~~L--~gI~v~~g~~~~~-------- 1719 (2602)
.+ .|++.....+. . ....+..|.+++. ....++..| .++.++.|..+..
T Consensus 296 ~~-~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~ 374 (414)
T 3ndn_A 296 NG-HPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTT 374 (414)
T ss_dssp HT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTT
T ss_pred hc-CCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCccccc
Confidence 77 67765332111 0 1233455555432 234566666 4677777765432
Q ss_pred CCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHH
Q psy15216 1720 ASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKL 1761 (2602)
Q Consensus 1720 ~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~ 1761 (2602)
....+.......|+.+ +.||||++....++.++.+-++
T Consensus 375 ~~~~~~~~~~~~g~~~----~~iRlsvG~e~~~dli~dl~~a 412 (414)
T 3ndn_A 375 HRAMGPEGRAAIGLGD----GVVRISVGLEDTDDLIADIDRA 412 (414)
T ss_dssp TCTTHHHHHHHTTCCT----TEEEEECCSSCHHHHHHHHHHH
T ss_pred cccCCHHHHHhcCCCC----CeEEEEeCcCCHHHHHHHHHHh
Confidence 1122333445567664 8999999975544444444333
No 375
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.83 E-value=9.6e-21 Score=243.22 Aligned_cols=305 Identities=18% Similarity=0.183 Sum_probs=197.7
Q ss_pred EEEEEcCcccEEEEEEECCeEE-EEeCCCCCccccEE-EEEecCCcEEecHHHHhhhccCCCCchhhhhhhcCCCCCCCC
Q psy15216 2035 SIGIDFGTTNSLVAIVRNNIPE-VLKDKYGYFLIPSI-VRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNIN 2112 (2602)
Q Consensus 2035 vvGIDfGTt~s~va~~~~g~~~-ii~~~~g~~~~PS~-v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~K~~lg~~~~~~~ 2112 (2602)
.|+||+||+++.+++..++.|. ++++--|....+++ +.+ .+...++|++|+... . ...+++-|.
T Consensus 7 ~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~-~~~~~~vG~~a~~~~----~--~~~~~~Pi~------- 72 (375)
T 2fxu_A 7 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM-GQKDSYVGDEAQSKR----G--ILTLKYPIE------- 72 (375)
T ss_dssp CEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC--------CCEEHHHHHHHT----T--SEEEECSEE-------
T ss_pred eEEEECCCCeEEEEECCCCCCceeeccccccccccccccCC-CCCCeEechhHhhcC----c--ccceecccc-------
Confidence 5899999999999987666554 34443333333221 111 123468999986641 1 011111111
Q ss_pred CCCCCeeeecCCCceEEEecCceeCHHHHHHHHHHHHHHHHHHhhcccc--ceEEEeeCCCCCHHHHHHHHHHH-HHcCC
Q psy15216 2113 TNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRI--FGAVITVPAYFNDIQRQFTKNAA-KLAGL 2189 (2602)
Q Consensus 2113 ~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~--~~~ViTVPa~f~~~qr~~l~~Aa-~~AGl 2189 (2602)
.+...--+.+..+++++.. +.++... ..++||+|++++..+|+++.+++ +.+|+
T Consensus 73 --------------------~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~ 129 (375)
T 2fxu_A 73 --------------------HGIITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNV 129 (375)
T ss_dssp --------------------TTEECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCC
T ss_pred --------------------CCcccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCc
Confidence 1111112233444444432 2344332 35999999999999999888765 88899
Q ss_pred ceeEeechhHHHHHHhhhccCCCCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCchhHHHHHHHHHHHHHHhhh
Q psy15216 2190 NVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLK 2269 (2602)
Q Consensus 2190 ~~~~li~EP~AAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~ 2269 (2602)
+.+.+++||+|||++++. .+.+|+|+||||||++.+ .+|. .+....+...+||+++|+.|.+++..+.+ .
T Consensus 130 ~~~~~~~e~~aaa~a~g~------~~~lVvDiG~gtt~v~~v--~~G~-~~~~~~~~~~~GG~~lt~~l~~~l~~~~~-~ 199 (375)
T 2fxu_A 130 PAMYVAIQAVLSLYASGR------TTGIVLDSGDGVTHNVPI--YEGY-ALPHAIMRLDLAGRDLTDYLMKILTERGY-S 199 (375)
T ss_dssp SEEEEEEHHHHHHHHTTC------SSEEEEEECSSCEEEEEE--ETTE-ECGGGCEEESCCHHHHHHHHHHHHHHHTC-C
T ss_pred ceEEEccchheeeeecCC------CeEEEEEcCCCceEEeEe--ECCE-EeccceEEeccCHHHHHHHHHHHHHhcCC-C
Confidence 999999999999999875 357999999999998765 4553 23333445799999999999999987511 1
Q ss_pred cCChhHHHHHHHHHHHHHHHhccc--------------ceEEEEEEecCCceEEEEcCHHHH---HHHHHHH-----HHH
Q psy15216 2270 KLSYKDVNILMIKSREIKELLSYQ--------------SSVKLNVKLSDKKIVNITIDMKQF---FTITQHL-----VNR 2327 (2602)
Q Consensus 2270 ~~~~~~~~~l~~~~e~~K~~ls~~--------------~~~~~~i~~~~~~~~~~~itr~~f---e~l~~~~-----~~~ 2327 (2602)
.... .-...+|++|+.+... ......+++.++. .+++++++| |.+++|. ...
T Consensus 200 -~~~~---~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lpdg~--~i~i~~erf~~~E~lf~p~~~~~~~~~ 273 (375)
T 2fxu_A 200 -FVTT---AEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ--VITIGNERFRCPETLFQPSFIGMESAG 273 (375)
T ss_dssp -CCSH---HHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTTSC--EEEESTHHHHHHHTTTCGGGGTCCSCC
T ss_pred -CCcH---HHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECCCCC--EEEEChhheechHhhCCCccCCCCCCC
Confidence 1100 0123445555554221 0112234455554 467888877 4455553 355
Q ss_pred HHHHHHHHHHHcCC--CccccceEEEEeCccchHHHHHHHHhhcC--------CcccCCCCccchhhhHHHHHhH
Q psy15216 2328 TILLSSKALMDANL--TIKDINNVILVGGSTRMKHIHEGVSNFFK--------TTLLTSIDPDKAVVFGAAIQAN 2392 (2602)
Q Consensus 2328 ~~~~i~~~l~~~~~--~~~~i~~V~LvGG~s~~p~v~~~l~~~f~--------~~~~~~~~p~~aVa~GAa~~a~ 2392 (2602)
+.++|.+.|+.+.. ....++.|+|+||+|++|.++++|++.++ .++..+.+|..++++||+++|.
T Consensus 274 i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 274 IHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 77888888886632 23346889999999999999999998774 3455678999999999999996
No 376
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.83 E-value=8.5e-20 Score=243.85 Aligned_cols=319 Identities=14% Similarity=0.102 Sum_probs=218.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHh-----CC--CCCcEEEeCCHHHHHHHHHHhhhh
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI-----YA--DPREIIWTSGATESNNLAIKGAAH 1476 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~-----g~--~~~~iv~t~gaT~al~~al~~l~~ 1476 (2602)
..|..+.++..+.+....+. ..+.|.. .....++|+++++++ |. ++++|++|+|+++|+.+++.++.
T Consensus 101 ~~P~~~~~~~~~~l~~~~~~-~~~~Y~~----~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~- 174 (498)
T 3ihj_A 101 SFPEDAKKRARRILQACGGN-SLGSYSA----SQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILV- 174 (498)
T ss_dssp SSCHHHHHHHHHHHHHC---------------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHHHHhccCC-CCCCCCC----CCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHc-
Confidence 34667777777777653210 0111111 122345566666555 34 67899999999999999999887
Q ss_pred hhccCCC----EEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC--CCCcChhHHHhhccC-----CceEEEEecccccc
Q psy15216 1477 FYKKRGK----HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICS-----DTILVSVMLVNNEI 1545 (2602)
Q Consensus 1477 ~~~~~gd----~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~id~d~l~~~i~~-----~t~lv~l~~~~n~t 1545 (2602)
++|| +|+++.|.|+++...+... |++++.++.++ ++.+|+++|++++++ ++++|++++|+|||
T Consensus 175 ---~~gd~~~d~Vlv~~p~y~~~~~~~~~~---g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPT 248 (498)
T 3ihj_A 175 ---SGGGKSRTGVMIPIPQYPLYSAVISEL---DAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPT 248 (498)
T ss_dssp ---CCCGGGSEEEEEEESCCTHHHHHHHHT---TCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTT
T ss_pred ---CCCCCCCCEEEEeCCCchhHHHHHHHc---CCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCC
Confidence 6764 9999999999988777665 99999998875 467999999999986 68999999999999
Q ss_pred ccccC---hHHHHHHhhhcCCEEEEecccccCccc-----ccCCC----C------Cc-cEEEEcccccc-CCCc--eEE
Q psy15216 1546 GVIQP---ILEIGELCRSKGVIFHCDAAQAVGKID-----INIQN----Y------KV-DLMSFSAHKIY-GPKG--IGA 1603 (2602)
Q Consensus 1546 G~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~~-----~~l~~----~------~~-D~~v~S~~K~~-gp~G--~G~ 1603 (2602)
|.+++ +++|+++|++||+++|+|++|+..... .++.. + .. .+++.|+||.+ |++| +||
T Consensus 249 G~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~ 328 (498)
T 3ihj_A 249 GQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGY 328 (498)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEE
T ss_pred CCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEE
Confidence 99998 667999999999999999998753321 11111 1 11 25677999966 6666 799
Q ss_pred EEE---ecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15216 1604 LYI---RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR----------LARIEMKEELKRILFLQKRLYNGLM 1670 (2602)
Q Consensus 1604 l~~---~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~----------~~~~~~~~~~~~~~~l~~~l~~~L~ 1670 (2602)
+++ ++++++.+.... . ...+++.+.+.++..++. ........+++++.++++++++.|.
T Consensus 329 ~~~~~~~~~l~~~l~~~~-------~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 400 (498)
T 3ihj_A 329 MEVINLHPEIKGQLVKLL-------S-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFN 400 (498)
T ss_dssp EEEESCCHHHHHHHHHHH-------H-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHH-------h-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 985 555554443321 1 123556666667766663 1122356777888999999999998
Q ss_pred hcCCcEEEeCCCCCCCCceEEEEE--e----------cCCcHHH--HHhc--CCEEEccccccCCCCCChhHHHHHcCCC
Q psy15216 1671 ESIEEIYINGDMNNRIPHNLNISF--N----------FIEGESL--LMAI--KDIAVSSGSACTSASLEPSYVLRALGCN 1734 (2602)
Q Consensus 1671 ~~~~gl~i~~~~~~~~~~~~~~~~--~----------~~~~~~~--~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~ 1734 (2602)
+ ++++.+..+.... ...+.+ + +.+.+.+ ...| +||.+.+|..|...
T Consensus 401 ~-~~g~~~~~p~gg~---~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~-------------- 462 (498)
T 3ihj_A 401 Q-VPGIHCNPLQGAM---YAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQR-------------- 462 (498)
T ss_dssp T-STTEECCCCCBSS---EECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCC--------------
T ss_pred c-CCCcEecCCCeEE---EEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCC--------------
Confidence 8 7898876443221 111112 1 1123332 2333 69999999988642
Q ss_pred ccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1735 DELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1735 ~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
...+++|+++. .+.++++.++++|++
T Consensus 463 --~~~~~~Ris~~--~~~e~l~~~i~~L~~ 488 (498)
T 3ihj_A 463 --EGTYHFRMTIL--PPVEKLKTVLQKVKD 488 (498)
T ss_dssp --TTCCBEEEECC--SCHHHHHHHHHHHHH
T ss_pred --CCCCEEEEEeC--CCHHHHHHHHHHHHH
Confidence 11368999995 689999999999987
No 377
>1xjs_A NIFU-like protein; SR17, structure, autostructure, iron-sulfur, zinc, northeast structural genomics consortium, NESG; NMR {Bacillus subtilis} SCOP: d.224.1.2 PDB: 2azh_A
Probab=99.83 E-value=2e-21 Score=207.94 Aligned_cols=88 Identities=35% Similarity=0.707 Sum_probs=83.8
Q ss_pred hhhhhhhhhhhhhcCCCCcCcccCCCCcceeeeecCCCCccEEEEEEEEcCCCcEEeeeeeccccchhHhhHHHHHHHHc
Q psy15216 1767 FFMSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSSLVTEWVK 1846 (2602)
Q Consensus 1767 ~~~~y~~~i~dh~~~p~~~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~~~~~i~~~~~~~~gc~~~~a~~s~~~~~~~ 1846 (2602)
++++|+++|+|||+||||+|.+ +++ ++++++||+|||.|+|||+|+ +|+|+|++|+++||+++||||||+||+++
T Consensus 7 l~~lY~~~Ildh~~nP~n~G~l-~~~---~~~~~~np~CGD~i~l~lkv~-~~~I~d~~f~~~GCais~ASaS~mte~v~ 81 (147)
T 1xjs_A 7 LDTLYRQVIMDHYKNPRNKGVL-NDS---IVVDMNNPTCGDRIRLTMKLD-GDIVEDAKFEGEGCSISMASASMMTQAIK 81 (147)
T ss_dssp THHHHHHHHHHHHHSCCCCCCC-CSS---EEEEEEETTTTEEEEEEEECC-SSBCCEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCCCCC-CCC---eEEeecCCCCCCEEEEEEEEC-CCeEEEEEEEecCCHHHHHHHHHHHHHHc
Confidence 5778999999999999999999 877 899999999999999999995 78999999999999999999999999999
Q ss_pred CCChhhhhccccc
Q psy15216 1847 GKTLDEAMSIKNT 1859 (2602)
Q Consensus 1847 g~~~~~~~~i~~~ 1859 (2602)
|||++||..+++.
T Consensus 82 Gkt~~Ea~~i~~~ 94 (147)
T 1xjs_A 82 GKDIETALSMSKI 94 (147)
T ss_dssp TSBHHHHHHHHHH
T ss_pred CCcHHHHHHHHHH
Confidence 9999999999875
No 378
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.83 E-value=1.8e-20 Score=240.24 Aligned_cols=318 Identities=16% Similarity=0.159 Sum_probs=204.5
Q ss_pred eceeeeccCCC-CCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q psy15216 1392 PYTNIVFKDAT-TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLA 1470 (2602)
Q Consensus 1392 P~~~v~L~~~~-~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~a 1470 (2602)
|...++++.+. ..+++.+.+++.+.... .. .|. ......++|+++++++|.+ ++++++|+|+|+.++
T Consensus 2 ~~~~i~~~~~~~~~p~~~~~~a~~~~~~~-----~~-~y~----~~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~~ 69 (347)
T 1jg8_A 2 PHMMIDLRSDTVTKPTEEMRKAMAQAEVG-----DD-VYG----EDPTINELERLAAETFGKE--AALFVPSGTMGNQVS 69 (347)
T ss_dssp ---CEECSCGGGCCCCHHHHHHHHTCCCC-----CG-GGT----CCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHH
T ss_pred CceEEEeccccCCCCCHHHHHHHhcCCCC-----Cc-ccC----CChHHHHHHHHHHHHhCCc--eEEEecCcHHHHHHH
Confidence 33445665433 34556677777543211 00 111 1224678999999999974 688899999999998
Q ss_pred HHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccC------CceEEEEeccccc
Q psy15216 1471 IKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNE 1544 (2602)
Q Consensus 1471 l~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~------~t~lv~l~~~~n~ 1544 (2602)
+.++. ++||+|++++++|++.......+...|++++.+ .++++.+|+++|++++++ +|++|++++|+||
T Consensus 70 ~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~np 144 (347)
T 1jg8_A 70 IMAHT----QRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNR 144 (347)
T ss_dssp HHHHC----CTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTT
T ss_pred HHHhc----CCCCEEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccc
Confidence 88876 899999999999977443222233458999988 555677899999999985 6899999999999
Q ss_pred c-ccccCh---HHHHHHhhhcCCEEEEecccccCc---ccccCCC--CCccEEEEccccccCCCceE-EEEEecCCCCcc
Q psy15216 1545 I-GVIQPI---LEIGELCRSKGVIFHCDAAQAVGK---IDINIQN--YKVDLMSFSAHKIYGPKGIG-ALYIRRNPRTRI 1614 (2602)
Q Consensus 1545 t-G~~~~l---~~I~~ia~~~gi~vivD~a~~~g~---~~~~l~~--~~~D~~v~S~~K~~gp~G~G-~l~~~~~~~~~l 1614 (2602)
| |.++|. ++|.++|++||+++++|++|.++. ...+... .+.|.+++|+||.+|++ +| +++.++++++.+
T Consensus 145 t~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~-~G~~~~~~~~~~~~~ 223 (347)
T 1jg8_A 145 SGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAP-VGSVVVGDRDFIERA 223 (347)
T ss_dssp TTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCS-SCEEEEECHHHHHHH
T ss_pred cCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCC-ceEEEEcCHHHHHHH
Confidence 9 999884 688899999999999999985532 1112111 24688888999966643 44 566666555554
Q ss_pred ccccccCCccccCCCCCc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEE
Q psy15216 1615 EAQIHGGGHEYGLRSGTL--ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNI 1692 (2602)
Q Consensus 1615 ~~~~~g~~~~~~~~~gt~--~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~ 1692 (2602)
......+ .++. +....++...+++.. .+. .++..++++++.+.|.+ . ++.+..++. ...+..+
T Consensus 224 ~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~---~~~-~~~~~~~~~~l~~~L~~-~-~~~~~~~~~--~~~~~~~ 288 (347)
T 1jg8_A 224 RKARKML-------GGGMRQAGVLAAAGIIALTKM---VDR-LKEDHENARFLALKLKE-I-GYSVNPEDV--KTNMVIL 288 (347)
T ss_dssp HHHHHHH-------TCCCSSTHHHHHHHHHHHHHS---STT-HHHHHHHHHHHHHHHHH-H-TCBCCGGGC--CSSEEEE
T ss_pred HHHHHHc-------CCchhHHHHHHHHHHHHHHHH---HHH-HHHHHHHHHHHHHHHHh-c-CceeccCCC--cceEEEE
Confidence 3321100 0111 111112222333321 111 22334566777888876 3 554321111 1233444
Q ss_pred EEe--cCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1693 SFN--FIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1693 ~~~--~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.++ ..+..++...| +||.++++. .+++|++++.++|.+|+++++++|++.
T Consensus 289 ~~~~~~~~~~~~~~~l~~~gi~v~~~~-----------------------~~~iRl~~~~~~~~e~i~~~~~~l~~~ 342 (347)
T 1jg8_A 289 RTDNLKVNAHGFIEALRNSGVLANAVS-----------------------DTEIRLVTHKDVSRNDIEEALNIFEKL 342 (347)
T ss_dssp ECTTSSSCHHHHHHHHHHHTEECEEEE-----------------------TTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred EcccccCCHHHHHHHHHHCCCEEecCC-----------------------CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 444 23456676666 689887532 168999999999999999999999873
No 379
>1su0_B NIFU like protein ISCU; structural genomics, BSGC structure funded by NI protein structure initiative, PSI; 2.30A {Streptococcus pyogenes} SCOP: d.224.1.2
Probab=99.83 E-value=3.5e-21 Score=208.17 Aligned_cols=88 Identities=32% Similarity=0.534 Sum_probs=83.5
Q ss_pred hhhhhhhhhhhhhcCCCCcCcccCCCCcceeeeecCCCCccEEEEEEEEcCCCcEEeeeeeccccchhHhhHHHHHHHHc
Q psy15216 1767 FFMSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSSLVTEWVK 1846 (2602)
Q Consensus 1767 ~~~~y~~~i~dh~~~p~~~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~~~~~i~~~~~~~~gc~~~~a~~s~~~~~~~ 1846 (2602)
++.+|+++|+|||+||||+|.+ +++ ++++++||+|||.|+|||+|+ +|+|+|++|+++||+++||||||+||+++
T Consensus 6 l~~lY~~~Ildh~~nP~n~G~l-~~~---~~~~~~np~CGD~i~l~lkv~-~g~I~d~~F~~~GCais~ASaS~mte~v~ 80 (159)
T 1su0_B 6 LNHLYMAVVADHSKRPHHHGQL-DGV---EAVQLNNPTCGDVISLTVKFD-EDKIEDIAFAGNGCTISTASSSMMTDAVI 80 (159)
T ss_dssp CCHHHHHHHHHHHHSCSSBSCC-TTC---CCEEEECSSSCCEEEEEEEES-SSSEEEEEEEEECCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCCCCC-CCC---eEEeecCCCCCCEEEEEEEEC-CCEEEEEEEEecCCHHHHHHHHHHHHHHc
Confidence 5778999999999999999999 877 789999999999999999995 78999999999999999999999999999
Q ss_pred CCChhhhhccccc
Q psy15216 1847 GKTLDEAMSIKNT 1859 (2602)
Q Consensus 1847 g~~~~~~~~i~~~ 1859 (2602)
|||++||..+++.
T Consensus 81 Gkt~~Ea~~i~~~ 93 (159)
T 1su0_B 81 GKSKEEALALADI 93 (159)
T ss_dssp TCCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHH
Confidence 9999999999864
No 380
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.83 E-value=2.2e-20 Score=245.85 Aligned_cols=299 Identities=17% Similarity=0.164 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHH-HhCCcEEEEeccCC
Q psy15216 1438 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPKN 1516 (2602)
Q Consensus 1438 ~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~ 1516 (2602)
..+++++++++++|.+ ++++++|+++|++.++. +. ++||+|+++++.|+++...+..+ ...|++++.++.+
T Consensus 134 ~~~~l~~~la~~~g~~--~~i~~~sGt~al~~~l~-~~----~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~- 205 (464)
T 1ibj_A 134 TRDALESLLAKLDKAD--RAFCFTSGMAALSAVTH-LI----KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT- 205 (464)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHT-TS----CTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-
T ss_pred HHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHH-Hh----CCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-
Confidence 5788999999999965 77888888999987764 43 79999999999999987765433 4559999999864
Q ss_pred CCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEcccc-c
Q psy15216 1517 NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-I 1595 (2602)
Q Consensus 1517 ~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K-~ 1595 (2602)
|+++|+++++++|++|++++|+||||.++|+++|.++|++||+++|+|++|+.|.....+. +++|++++|+|| +
T Consensus 206 ----d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~-~~~div~~S~sK~~ 280 (464)
T 1ibj_A 206 ----KLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE-LGADIVMHSATKFI 280 (464)
T ss_dssp ----SHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG-TTCSEEEEETTTTT
T ss_pred ----CHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh-cCCEEEEECCcccc
Confidence 8999999999999999999999999999999999999999999999999998876422222 578999999999 4
Q ss_pred cCCCce--EEEEEec-CCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q psy15216 1596 YGPKGI--GALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYN----- 1667 (2602)
Q Consensus 1596 ~gp~G~--G~l~~~~-~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~----- 1667 (2602)
.|+.|+ |++++++ ++.+.+.+... ...++.+....+++..+++.....++........+.+++.+
T Consensus 281 ~g~~Gl~~G~l~~~~~~l~~~l~~~~~-------~~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~ 353 (464)
T 1ibj_A 281 AGHSDVMAGVLAVKGEKLAKEVYFLQN-------SEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_dssp TCSSCCCCEEEEECSHHHHHHHHHHHH-------HTTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred cCCCCCcEEEEEEChHHHHHHHHHHHH-------hcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 567675 9999985 55555543321 11123344444444455542222233333333333333332
Q ss_pred -----HHhhcCCcEEEeCCCCCCCCceEEEEEecCC-cHHHHHhc--CCEEEcccc----ccCCCC----CChhHHHHHc
Q psy15216 1668 -----GLMESIEEIYINGDMNNRIPHNLNISFNFIE-GESLLMAI--KDIAVSSGS----ACTSAS----LEPSYVLRAL 1731 (2602)
Q Consensus 1668 -----~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~L--~gI~v~~g~----~~~~~~----~~~~~~~~~~ 1731 (2602)
.|.+ .|++.+..+.......+..|.+.+.+ ...+...| .+|.++.|. .|.+.. ..+......+
T Consensus 354 ~~~~~~L~~-~p~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~ 432 (464)
T 1ibj_A 354 KVYYAGLPD-HPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREAR 432 (464)
T ss_dssp EEECTTSTT-STTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSS
T ss_pred EEECCCCCC-CcchHHHhccCCCCceEEEEEECCHHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhc
Confidence 2222 23444333222112334444443211 23466665 688888876 222210 0000001112
Q ss_pred CCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1732 GCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1732 ~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
|.. .++||+|++. ||++++++.|++.
T Consensus 433 g~~----~~~iRlsvg~----edi~~li~~L~~a 458 (464)
T 1ibj_A 433 GLT----EDLVRISAGI----EDVDDLISDLDIA 458 (464)
T ss_dssp SCC----TTCEEEECCS----SCHHHHHHHHHHH
T ss_pred CCC----cCeEEEEeCC----CCHHHHHHHHHHH
Confidence 222 3789999995 8899999999863
No 381
>1xjs_A NIFU-like protein; SR17, structure, autostructure, iron-sulfur, zinc, northeast structural genomics consortium, NESG; NMR {Bacillus subtilis} SCOP: d.224.1.2 PDB: 2azh_A
Probab=99.83 E-value=2.8e-21 Score=206.72 Aligned_cols=88 Identities=35% Similarity=0.707 Sum_probs=83.7
Q ss_pred hhhhhhHhhhhcccCCCCCCCCCCCCCcceeeeeCCCCcccEEEEEEEEcCCCceEeeeeeccccchhHhhHHHHHHHHc
Q psy15216 371 FFMSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSSLVTEWVK 450 (2602)
Q Consensus 371 ~~~~y~~~~~~hy~~p~n~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~~~~~i~~~~~~~~gc~~~~a~~s~~~~~~~ 450 (2602)
++++|+++++|||+||||+|.+ +++ ++++.+||+|||.|+|+|+|+ +|+|+|++|+|+||+++|||||++||+++
T Consensus 7 l~~lY~~~Ildh~~nP~n~G~l-~~~---~~~~~~np~CGD~i~l~lkv~-~~~I~d~~f~~~GCais~ASaS~mte~v~ 81 (147)
T 1xjs_A 7 LDTLYRQVIMDHYKNPRNKGVL-NDS---IVVDMNNPTCGDRIRLTMKLD-GDIVEDAKFEGEGCSISMASASMMTQAIK 81 (147)
T ss_dssp THHHHHHHHHHHHHSCCCCCCC-CSS---EEEEEEETTTTEEEEEEEECC-SSBCCEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCCCCC-CCC---eEEeecCCCCCCEEEEEEEEC-CCeEEEEEEEecCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999 877 788999999999999999995 78999999999999999999999999999
Q ss_pred CCChhhhhhcccc
Q psy15216 451 GKTLDEAMSIKNT 463 (2602)
Q Consensus 451 g~~~~e~~~i~~~ 463 (2602)
|||++||..+++.
T Consensus 82 Gkt~~Ea~~i~~~ 94 (147)
T 1xjs_A 82 GKDIETALSMSKI 94 (147)
T ss_dssp TSBHHHHHHHHHH
T ss_pred CCcHHHHHHHHHH
Confidence 9999999999864
No 382
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.83 E-value=4.5e-20 Score=241.53 Aligned_cols=316 Identities=12% Similarity=0.059 Sum_probs=208.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC------CCCcEEE--eCCHHHHHH
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA------DPREIIW--TSGATESNN 72 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~------~~~~Iv~--t~g~T~al~ 72 (2602)
+|+.+.++..+.+.+++.+.+.. ..++.. ... ....++|++++++++. ++++|++ |+|+|+|++
T Consensus 39 ~d~~~~~~~~~~v~~a~~~~~~~-~~~~~Y---~~~----~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~ 110 (401)
T 7aat_A 39 RDDNGKPYVLNCVRKAEAMIAAK-KMDKEY---LPI----AGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLR 110 (401)
T ss_dssp CCTTSCCCCCHHHHHHHHHHHHT-TCCCCC---CCT----TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHH
T ss_pred ECCCCCEechHHHHHHHHHhccc-ccccCC---CCC----CCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHH
Confidence 36666667777888888877652 112211 110 1245678888887754 3789977 999999999
Q ss_pred HHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccC--CCCccChHHHHhhcc---CCceEEEEecccC
Q psy15216 73 LAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKIC---SDTILVSVMLVNN 147 (2602)
Q Consensus 73 ~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~ld~e~l~~~i~---~~tklv~i~~~~n 147 (2602)
+++.++. ...++||+|++++|.|+++...++.. |++++.++.+ .++.+|++++++.+. ++++++++++|||
T Consensus 111 ~~~~~l~-~~~~~gd~Vlv~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~N 186 (401)
T 7aat_A 111 VGANFLQ-RFFKFSRDVYLPKPSWGNHTPIFRDA---GLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHN 186 (401)
T ss_dssp HHHHHHH-HHCTTCCEEEEEESCCTTHHHHHHHT---TCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCT
T ss_pred HHHHHHH-HhccCCCEEEEcCCCchhHHHHHHHc---CCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence 9887764 12378999999999999987777655 9999999874 367899996666654 6789999999999
Q ss_pred ccccccc---HHHHHHHHHhcCCEEEEecccccccc-cc-----cC----CCCCccEEEeccccccCCCC--cEEEEEec
Q psy15216 148 EIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI-DI-----NI----QNYKVDLMSFSAHKIYGPKG--IGALYIRR 212 (2602)
Q Consensus 148 pTG~~~~---l~~I~~la~~~g~~livD~a~a~g~~-~~-----dl----~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~ 212 (2602)
|||.+++ +++|+++|++||+++|+|++|..... +. .+ ......+++.|+||.+|++| +||+++..
T Consensus 187 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~ 266 (401)
T 7aat_A 187 PTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVIC 266 (401)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEe
Confidence 9998887 66788899999999999999764321 11 01 12234688899999999988 89998732
Q ss_pred ---CC----CCcccceecCCCccccccccCcchhHHHHHHHHHHH--H----HHhHHHHHHHHHHHHHHHHHHHhhcc--
Q psy15216 213 ---NP----RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL--A----RIEMKEELKRILFLQKRLYNGLMESI-- 277 (2602)
Q Consensus 213 ---~~----~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~--~----~~~~~~~~~~~~~l~~~l~~~L~~~~-- 277 (2602)
+. ...+.... .....+++.....++..+++. . ...+++.+++++++++++.+.|.+..
T Consensus 267 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 339 (401)
T 7aat_A 267 RDAEEAKRVESQLKILI-------RPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSS 339 (401)
T ss_dssp SSHHHHHHHHHHHHHHH-------HHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHH-------HhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 21 11111111 001122333333333334431 1 33467778889999999999997721
Q ss_pred CceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCC
Q psy15216 278 EEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT 355 (2602)
Q Consensus 278 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t 355 (2602)
+++....+.. ..+.+...+.+.+...+ +||.+. ..+|+|++.+++
T Consensus 340 ~~~~~~~~~~------~~~~~~~~~~~~~~~ll~~~gi~v~---------------------------~~~Ris~~~~~~ 386 (401)
T 7aat_A 340 HNWQHITDQI------GMFCFTGLKPEQVERLTKEFSIYMT---------------------------KDGRISVAGVAS 386 (401)
T ss_dssp SCCHHHHHCC------SSEEECCCCHHHHHHHHHHHCEECC---------------------------TTCEEEGGGCCT
T ss_pred CCCceecCCc------ceEEecCCCHHHHHHHHHhCCEecc---------------------------CCCeEEeccCCh
Confidence 1233332211 12333444444433222 577764 237999987666
Q ss_pred HHHHHHHHHHHHhh
Q psy15216 356 EKEIDFTIKLLKMK 369 (2602)
Q Consensus 356 ~edid~li~~L~~~ 369 (2602)
++ |++++++|++.
T Consensus 387 ~~-i~~~~~~l~~~ 399 (401)
T 7aat_A 387 SN-VGYLAHAIHQV 399 (401)
T ss_dssp TT-HHHHHHHHHHH
T ss_pred hh-HHHHHHHHHHH
Confidence 55 99999999863
No 383
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.83 E-value=2.4e-19 Score=234.98 Aligned_cols=303 Identities=14% Similarity=0.103 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHH-HHhCCcEEEEe-cc
Q psy15216 1437 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYL-KP 1514 (2602)
Q Consensus 1437 ~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~-~~~~G~~v~~v-~~ 1514 (2602)
....++++++++++|.+ ..++++++++|++.++.++. ++||+|+++.++|+++...+.. +...|++++++ +.
T Consensus 58 ~~~~~l~~~la~~~g~~--~~v~~~sGt~A~~~~l~~~~----~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 131 (421)
T 2ctz_A 58 PTVDVLEKRLAALEGGK--AALATASGHAAQFLALTTLA----QAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE 131 (421)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC----CTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT
T ss_pred hHHHHHHHHHHHHhCCC--ceEEecCHHHHHHHHHHHHh----CCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC
Confidence 45788999999999975 44566667999999999876 7999999999999998877743 34569999998 75
Q ss_pred CCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEeccc-ccCcccccCCCCCccEEEEccc
Q psy15216 1515 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQ-AVGKIDINIQNYKVDLMSFSAH 1593 (2602)
Q Consensus 1515 ~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~-~~g~~~~~l~~~~~D~~v~S~~ 1593 (2602)
+ |+++++++|+++|++|++++++||+|.+.|+++|.++|++||+++|+|++| +.|... ....+++|++++|+|
T Consensus 132 ~-----d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~-~~~~~~~Di~~~s~~ 205 (421)
T 2ctz_A 132 E-----RPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL-RPLAWGAALVTHSLT 205 (421)
T ss_dssp C-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC-CGGGGTCSEEEEETT
T ss_pred C-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC-CccccCCeEEEECCc
Confidence 4 899999999999999999999999999999999999999999999999999 877522 222457899999999
Q ss_pred cccCCCc--eEEEEEec---CC----CCccccccccCCccc--------------cCC----CC-CcchhHHHHHHHHHH
Q psy15216 1594 KIYGPKG--IGALYIRR---NP----RTRIEAQIHGGGHEY--------------GLR----SG-TLATHQIVGMGEAFR 1645 (2602)
Q Consensus 1594 K~~gp~G--~G~l~~~~---~~----~~~l~~~~~g~~~~~--------------~~~----~g-t~~~~~~~al~~aL~ 1645 (2602)
|+++++| +|++++.+ ++ .+.+.+...++.... +++ .| ..+....+....+++
T Consensus 206 K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~ 285 (421)
T 2ctz_A 206 KWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGME 285 (421)
T ss_dssp TTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHT
T ss_pred ccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcc
Confidence 9666444 67777752 22 223443322221100 000 11 222222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCC---------------CCCCceEEEEEecC--CcHHHHHhc--
Q psy15216 1646 LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---------------NRIPHNLNISFNFI--EGESLLMAI-- 1706 (2602)
Q Consensus 1646 ~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~---------------~~~~~~~~~~~~~~--~~~~~~~~L-- 1706 (2602)
.+....++..++++++.+.|.+ .|++.....+. .....+..|.+.+. ....++..+
T Consensus 286 ----~l~~r~~~~~~~a~~l~~~L~~-~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~~ 360 (421)
T 2ctz_A 286 ----TLSLRAERHVENTLHLAHWLLE-QPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLKL 360 (421)
T ss_dssp ----THHHHHHHHHHHHHHHHHHHHT-CTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTCSS
T ss_pred ----hHHHHHHHHHHhHHHHHHHHHh-CCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhCCc
Confidence 2344566667889999999987 78887653221 12234455555431 233455555
Q ss_pred CCEEEccccccCC------CC--CChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1707 KDIAVSSGSACTS------AS--LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1707 ~gI~v~~g~~~~~------~~--~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.++.++.|..+.. .. ..+......+|+++ +.||+|++.+ +++.+++.|++
T Consensus 361 ~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~----~~vRlS~g~e----~~~~li~~l~~ 418 (421)
T 2ctz_A 361 ISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSP----EMVRLSVGLE----HVEDLKAELKE 418 (421)
T ss_dssp SEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCT----TEEEEECCSS----CHHHHHHHHHH
T ss_pred ceecccCCCCCceeeCCcccccccCCHHHHHhcCCCC----CeEEEEeCCC----CHHHHHHHHHH
Confidence 4556666633221 11 12222355677664 8999999975 45555555544
No 384
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.83 E-value=1.9e-19 Score=234.23 Aligned_cols=312 Identities=14% Similarity=0.139 Sum_probs=200.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHH-HHHhCCc
Q psy15216 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDGF 111 (2602)
Q Consensus 33 ~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~-~~~~~G~ 111 (2602)
+.+++...+..+++++++|+++|.+ ..++++|+++|+.+++.++. ++||+|+++++.|+++...+. .+...|+
T Consensus 74 ~~y~r~~~p~~~~le~~lA~l~g~~--~~v~~~sG~~Ai~~al~al~----~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~ 147 (430)
T 3ri6_A 74 HVYSRSSNPTVEDLEQRLKNLTGAL--GVLALGSGMAAISTAILTLA----RAGDSVVTTDRLFGHTLSLFQKTLPSFGI 147 (430)
T ss_dssp ------CCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHC----CTTCEEEEETTCCHHHHHHHHTHHHHTTC
T ss_pred ccccCCCCHHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEcCCCchhHHHHHHHHHHHcCC
Confidence 4445444567899999999999975 36677788899999999887 899999999999999888665 4567799
Q ss_pred EEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccccccCCCCCccE
Q psy15216 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (2602)
Q Consensus 112 ~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D~ 191 (2602)
++++++.+ |+++|+++++++|++|++++|+||||.+.|+++|+++|+++|+++|+|++++.+.. .+...+++|+
T Consensus 148 ~~~~v~~~-----d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~-~~~~~~g~di 221 (430)
T 3ri6_A 148 EVRFVDVM-----DSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL-LEAKRLGVDI 221 (430)
T ss_dssp EEEEECTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT-CCGGGGTCSE
T ss_pred EEEEeCCC-----CHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CChHHcCCEE
Confidence 99999865 89999999999999999999999999999999999999999999999999998775 3445678899
Q ss_pred EEeccccccCCCC---cEEEEEecCC-CC---ccccee--cCC-------C-ccccccccCcchhHHHHHHHHHHHHHHh
Q psy15216 192 MSFSAHKIYGPKG---IGALYIRRNP-RT---RIEAQI--HGG-------G-HEYGLRSGTLATHQIVGMGEAFRLARIE 254 (2602)
Q Consensus 192 ~~~S~~K~~Gp~G---~G~l~~~~~~-~~---~l~~~~--~g~-------~-~~~~~~~gt~~~~~~~al~~al~~~~~~ 254 (2602)
++.|++|++|++| .|+++.+.+. .. +...+. .+. . .......++.+....+.+..+++ .
T Consensus 222 v~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~----~ 297 (430)
T 3ri6_A 222 EVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLE----T 297 (430)
T ss_dssp EEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHH----H
T ss_pred EEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh----h
Confidence 9999999777654 4555543321 10 000000 000 0 00001112233222222222332 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCceEE-eCCCCCCCC------------c-eEEEEEcc-cChhHHHHHh--CCeEEcc
Q psy15216 255 MKEELKRILFLQKRLYNGLMESIEEIYI-NGDMNNRIP------------H-NLNISFNF-IEGESLLMAI--KDIAVSS 317 (2602)
Q Consensus 255 ~~~~~~~~~~l~~~l~~~L~~~~~g~~l-~~~~~~~~~------------~-~~~~~~~~-~~~~~~~~~L--~gI~v~~ 317 (2602)
+....++..+++.++.+.|.+ .|++.. ..|.-...| . ++.|.++. .....++..+ .++.++.
T Consensus 298 l~~r~~~~~~na~~la~~L~~-~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~ 376 (430)
T 3ri6_A 298 MALRIERSCQNAQELAHWLLS-IPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKEASYRFMDALKLIRRATNI 376 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-CTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHHCSSSEECSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHHHHHHHHHhCCcceecCCC
Confidence 455566777888888888877 677763 322211111 1 44444442 2344667766 4566666
Q ss_pred cccCCCCCCChHHHHH--------HcCCCccCCCCeEEEecCCCCCHHHHHHHHHH
Q psy15216 318 GSACTSASLEPSYVLR--------ALGCNDELAHSSIRFTIGRFTTEKEIDFTIKL 365 (2602)
Q Consensus 318 g~~~~~~~~~~~~~~~--------~~g~~~~~~~~~iRis~~~~~t~edid~li~~ 365 (2602)
|..++.-....+..+. ..|+. +++||+|+|....++-++.+-++
T Consensus 377 G~~~sli~~p~~~~h~~~~~~~~~~~g~~----~~liRlsvG~E~~~dl~~dl~~a 428 (430)
T 3ri6_A 377 HDNKSLILSPYHVIYALNSHEERLKLEIS----PAMMRLSVGIEEIEDLKEDILQA 428 (430)
T ss_dssp SCSSCEEECTGGGC---------CGGGSC----TTEEEEECCSSCHHHHHHHHHHH
T ss_pred CCCCceeeCCcccccccCCHHHHHhcCCC----CCeEEEEeccCCHHHHHHHHHHh
Confidence 6555421000111111 23333 58999999975544433333333
No 385
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.83 E-value=2.2e-20 Score=245.82 Aligned_cols=314 Identities=14% Similarity=0.097 Sum_probs=214.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhh--cCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC------CCC--cEEEeCCHHHHH
Q psy15216 2 DYSATTPIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLIYA------DPR--EIIWTSGATESN 71 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~~~--~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~------~~~--~Iv~t~g~T~al 71 (2602)
|..+.+|+++.+.+++.+.+... ..++. .....++|+.++++++. +++ +|++|+|+|+|+
T Consensus 61 d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~----------~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al 130 (420)
T 4f4e_A 61 NEDGKIPLLRAVRDAEKARVEAGLPRGYLP----------IDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGAL 130 (420)
T ss_dssp CTTSCCCCCHHHHHHHHHHHHTCCCCCCCC----------TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHH
T ss_pred CCCCCccCcHHHHHHHHHHhccCCCCCCCC----------CCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHH
Confidence 45566677899999999988751 11211 11245677778777743 466 899999999999
Q ss_pred HHHHH--hcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEecc--CCCCccChHHHHhhcc---CCceEEEEec
Q psy15216 72 NLAIK--GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP--KNNGLITLSQLEEKIC---SDTILVSVML 144 (2602)
Q Consensus 72 ~~~~~--~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~--~~~~~ld~e~l~~~i~---~~tklv~i~~ 144 (2602)
++++. ++. ++||+|++++|.|+++...+... |++++.++. ++++.+|++++++.++ ++++++++++
T Consensus 131 ~~~~~~~~~~----~~gd~Vlv~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~ 203 (420)
T 4f4e_A 131 KIGADFLRTL----NPKAKVAISDPSWENHRALFDMA---GFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHAC 203 (420)
T ss_dssp HHHHHHHHHH----CTTCCEEEEESCCHHHHHHHHHT---TCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECS
T ss_pred HHHHHHHHHh----CCCCEEEEeCCCcHhHHHHHHHc---CCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCC
Confidence 99954 444 79999999999999987766655 999999998 3467899999999997 7889999999
Q ss_pred ccCccccccc---HHHHHHHHHhcCCEEEEeccccccccc-----cc---C-CCCCccEEEeccccccCCCC--cEEEEE
Q psy15216 145 VNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKID-----IN---I-QNYKVDLMSFSAHKIYGPKG--IGALYI 210 (2602)
Q Consensus 145 ~~npTG~~~~---l~~I~~la~~~g~~livD~a~a~g~~~-----~d---l-~~~~~D~~~~S~~K~~Gp~G--~G~l~~ 210 (2602)
|+||||.+++ +++|+++|++||+++|+|++|+..... .. + ...+..+++.|+||.+|++| +||+++
T Consensus 204 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 283 (420)
T 4f4e_A 204 CHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSI 283 (420)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEE
Confidence 9999999988 557888899999999999998543221 00 1 12345688899999999888 899875
Q ss_pred ec---CCCCcccceecCCCccccccccCcchhHHHHHHHHHHHH------HHhHHHHHHHHHHHHHHHHHHHhhcc--Cc
Q psy15216 211 RR---NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESI--EE 279 (2602)
Q Consensus 211 ~~---~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~------~~~~~~~~~~~~~l~~~l~~~L~~~~--~g 279 (2602)
.. ++++.+...... ..+....+++.....++..++... ..++++.+++++++++++.+.|.+.. ++
T Consensus 284 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 360 (420)
T 4f4e_A 284 ITDSKDEAARVLSQLKR---VIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERD 360 (420)
T ss_dssp ECSSHHHHHHHHHHHHH---HHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred EcCCHHHHHHHHHHHHH---HHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 32 222221111000 000112234555555555555521 34468888999999999999998722 24
Q ss_pred eEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHH
Q psy15216 280 IYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEK 357 (2602)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~e 357 (2602)
+.+..+... .+.+...+...+...+ +||.+.++ .|+|++.. +++
T Consensus 361 ~~~~~~~~g------~~~~~~~~~~~~~~~l~~~gI~v~~~---------------------------~Ris~~~~-~~~ 406 (420)
T 4f4e_A 361 FSFINAQRG------MFSYSGLTSAQVDRLREEFGIYAVST---------------------------GRICVAAL-NTR 406 (420)
T ss_dssp CTHHHHSCS------SEEECCCCHHHHHHHHHHHCEECCTT---------------------------SEEEGGGC-CTT
T ss_pred ceeECCCcc------EEEEeCCCHHHHHHHHHhCCEEecCC---------------------------CeEEEecC-CHH
Confidence 444333221 1333344444444444 58877631 29999754 557
Q ss_pred HHHHHHHHHHhh
Q psy15216 358 EIDFTIKLLKMK 369 (2602)
Q Consensus 358 did~li~~L~~~ 369 (2602)
++++++++|++.
T Consensus 407 ~i~~~~~~l~~~ 418 (420)
T 4f4e_A 407 NLDVVANAIAAV 418 (420)
T ss_dssp THHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 799999999863
No 386
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.83 E-value=2.2e-20 Score=246.27 Aligned_cols=329 Identities=15% Similarity=0.169 Sum_probs=215.1
Q ss_pred CCCHHHHHHHHHHHhhcc--CCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccC
Q psy15216 1404 PIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 1481 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~--~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~ 1481 (2602)
..++.+.+++.+.+...+ ++|+...+..........+.+++++++++|++++++++++ |++|+..++.++. ++
T Consensus 41 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~s-Gs~a~~~a~~~~~----~~ 115 (420)
T 3gbx_A 41 YTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHS-GSQANFAVYTALL----QP 115 (420)
T ss_dssp CCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSS-HHHHHHHHHHHHC----CT
T ss_pred CCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecC-cHHHHHHHHHHhc----CC
Confidence 368899999998886544 5665433322222234556677899999999766665554 5889999998886 89
Q ss_pred CCEEEEcCCCCcchHHHHHHHH--hCCcEEEEeccCCCCCcChhHHHhhccC-CceEEEEeccccccccccChHHHHHHh
Q psy15216 1482 GKHIITVQTEHKSVLDSIRKLE--NDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGELC 1558 (2602)
Q Consensus 1482 gd~Vlv~~~~~~s~~~~~~~~~--~~G~~v~~v~~~~~~~id~d~l~~~i~~-~t~lv~l~~~~n~tG~~~~l~~I~~ia 1558 (2602)
||+|+++.++|+++........ ..+..+..++.+.++.+|+++|++++++ ++++|++++++|+ ...|+++|.++|
T Consensus 116 gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~l~~l~ 193 (420)
T 3gbx_A 116 GDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYS--GVVDWAKMREIA 193 (420)
T ss_dssp TCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCC--SCCCHHHHHHHH
T ss_pred CCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccC--CccCHHHHHHHH
Confidence 9999999999998543322221 1234555666677788999999999986 5999999988875 478999999999
Q ss_pred hhcCCEEEEecccccCcc-----cccCCCCCccEEEEcccccc-CCCceEEEEEec---CCCCccccccccCCccccCCC
Q psy15216 1559 RSKGVIFHCDAAQAVGKI-----DINIQNYKVDLMSFSAHKIY-GPKGIGALYIRR---NPRTRIEAQIHGGGHEYGLRS 1629 (2602)
Q Consensus 1559 ~~~gi~vivD~a~~~g~~-----~~~l~~~~~D~~v~S~~K~~-gp~G~G~l~~~~---~~~~~l~~~~~g~~~~~~~~~ 1629 (2602)
++||+++|+|++|+.|.. +..+. .+|++++|+||.+ ||+| |+++.++ ++.+.+.+..+.+ ..
T Consensus 194 ~~~~~~li~De~~~~~~~~~~~~~~~~~--~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~~~~~~------~~ 264 (420)
T 3gbx_A 194 DSIGAYLFVDMAHVAGLIAAGVYPNPVP--HAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNSAVFPS------AQ 264 (420)
T ss_dssp HHTTCEEEEECTTTHHHHHTTSSCCSTT--TSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHHHHC----------
T ss_pred HHcCCEEEEECCcchhceecccCCcccc--cCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhhhcCCC------CC
Confidence 999999999999876543 22222 3789999999965 7887 9999987 3333343322211 13
Q ss_pred CCcchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--CCcHHHHHhc
Q psy15216 1630 GTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESLLMAI 1706 (2602)
Q Consensus 1630 gt~~~~~~~al~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~L 1706 (2602)
++++...+.++..++.. ...++++..++..++++++.+.|.+ .++.+..+... .....+.++. .+...+...|
T Consensus 265 ~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l 340 (420)
T 3gbx_A 265 GGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN--RGYKVVSGGTE--NHLFLLDLVDKNLTGKEADAAL 340 (420)
T ss_dssp CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSCS--SSEEEEECGGGTCCHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh--cCCeeccCCCC--CeEEEEEcCCCCCCHHHHHHHH
Confidence 46667777777666653 3456788899999999999999987 57777642111 2233333332 2344555555
Q ss_pred --CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCC----CCHHHHHHHHHHHHHh
Q psy15216 1707 --KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1707 --~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~----~t~edid~li~~L~~~ 1765 (2602)
+||.+++...+... ......+.+||+++.. .+++++++++++|++.
T Consensus 341 ~~~gi~v~~~~~~~~~-------------~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~ 392 (420)
T 3gbx_A 341 GRANITVNKNSVPNDP-------------KSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDV 392 (420)
T ss_dssp HHTTEECEEECCTTCS-------------SCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHCCcEeccccCCCCc-------------cccCCCcceEEecchhcccCCCHHHHHHHHHHHHHH
Confidence 79999873322110 0001125699998654 3589999999999874
No 387
>1su0_B NIFU like protein ISCU; structural genomics, BSGC structure funded by NI protein structure initiative, PSI; 2.30A {Streptococcus pyogenes} SCOP: d.224.1.2
Probab=99.83 E-value=4.7e-21 Score=207.14 Aligned_cols=88 Identities=32% Similarity=0.534 Sum_probs=83.3
Q ss_pred hhhhhhHhhhhcccCCCCCCCCCCCCCcceeeeeCCCCcccEEEEEEEEcCCCceEeeeeeccccchhHhhHHHHHHHHc
Q psy15216 371 FFMSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGCGSAIASSSLVTEWVK 450 (2602)
Q Consensus 371 ~~~~y~~~~~~hy~~p~n~g~~~~~~~~~~~~~~~~~~cgd~~~~~~~~~~~~~i~~~~~~~~gc~~~~a~~s~~~~~~~ 450 (2602)
++++|+++++|||+||||+|.+ +++ ++++.+||+|||.|+|+|+|+ +|+|+|++|+|+||+++|||||+++|+++
T Consensus 6 l~~lY~~~Ildh~~nP~n~G~l-~~~---~~~~~~np~CGD~i~l~lkv~-~g~I~d~~F~~~GCais~ASaS~mte~v~ 80 (159)
T 1su0_B 6 LNHLYMAVVADHSKRPHHHGQL-DGV---EAVQLNNPTCGDVISLTVKFD-EDKIEDIAFAGNGCTISTASSSMMTDAVI 80 (159)
T ss_dssp CCHHHHHHHHHHHHSCSSBSCC-TTC---CCEEEECSSSCCEEEEEEEES-SSSEEEEEEEEECCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCCCCC-CCC---eEEeecCCCCCCEEEEEEEEC-CCEEEEEEEEecCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999 887 788889999999999999995 78999999999999999999999999999
Q ss_pred CCChhhhhhcccc
Q psy15216 451 GKTLDEAMSIKNT 463 (2602)
Q Consensus 451 g~~~~e~~~i~~~ 463 (2602)
|||++||..+.+.
T Consensus 81 Gkt~~Ea~~i~~~ 93 (159)
T 1su0_B 81 GKSKEEALALADI 93 (159)
T ss_dssp TCCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHH
Confidence 9999999999863
No 388
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.82 E-value=1e-19 Score=248.63 Aligned_cols=295 Identities=16% Similarity=0.079 Sum_probs=215.6
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCC
Q psy15216 1438 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN 1517 (2602)
Q Consensus 1438 ~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~ 1517 (2602)
.+.++++.+|+++|++. .+++++|+|+|+..+++++. ++||+|+++.+.|+++...+ +...|+++++++...+
T Consensus 174 ~i~e~e~~lA~~~gae~-~i~v~nGtt~an~~ai~al~----~pGD~VLv~~~~H~S~~~~~--~~l~Ga~~v~v~~~~~ 246 (730)
T 1c4k_A 174 PAVAAEKHAARVYNADK-TYFVLGGSSNANNTVTSALV----SNGDLVLFDRNNHKSVYNSA--LAMAGGRPVYLQTNRN 246 (730)
T ss_dssp HHHHHHHHHHHHTTCSE-EEEESSHHHHHHHHHHHHHC----CTTCEEEEETTCCHHHHHHH--TTTTCCEEEEECEEEC
T ss_pred HHHHHHHHHHHHHCCCc-EEEECCHHHHHHHHHHHHhc----CCCCEEEEcCCchHHHHHHH--HHHCCCEEEEEeCCcc
Confidence 57899999999999863 47788888899999999987 89999999999999987761 2334999999876432
Q ss_pred -----CCcChhHH-----HhhccCC------c----eEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCc--
Q psy15216 1518 -----GLITLSQL-----EEKICSD------T----ILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGK-- 1575 (2602)
Q Consensus 1518 -----~~id~d~l-----~~~i~~~------t----~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~-- 1575 (2602)
+.+|+++| +++|+++ + ++++++++ |++|.+.|+++|+++|++||+++++|+||+.+.
T Consensus 247 ~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f 325 (730)
T 1c4k_A 247 PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQF 325 (730)
T ss_dssp TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGS
T ss_pred ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEccccccccc
Confidence 34789988 9999876 5 89999998 589999999999999999999999999996421
Q ss_pred -------ccccCCCCCcc----EEEEcccc-ccCCCceEEEEEecCCCCc----cccccccCCccccCCCCCcchhHHHH
Q psy15216 1576 -------IDINIQNYKVD----LMSFSAHK-IYGPKGIGALYIRRNPRTR----IEAQIHGGGHEYGLRSGTLATHQIVG 1639 (2602)
Q Consensus 1576 -------~~~~l~~~~~D----~~v~S~~K-~~gp~G~G~l~~~~~~~~~----l~~~~~g~~~~~~~~~gt~~~~~~~a 1639 (2602)
.+++...+++| ++++|+|| +.|+.+.|+++++++.+.. +...... .....+.++++++..+++
T Consensus 326 ~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~~~~~-~~~~~~~stsp~~~~iaa 404 (730)
T 1c4k_A 326 IPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFN-NSFNLFMSTSPFYPMYAA 404 (730)
T ss_dssp SGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHH-HHHHHHSCSSCCHHHHHH
T ss_pred CcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCHHHHH-HHHHHhCCCCCcHHHHHH
Confidence 12333344677 99999999 6678878999998764311 1100000 001234567889999999
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCC--------------------------------C-C
Q psy15216 1640 MGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMN--------------------------------N-R 1685 (2602)
Q Consensus 1640 l~~aL~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~--------------------------------~-~ 1685 (2602)
+.+|+++... ...+..++..++++++++.|.+.++|+.+..+.. . .
T Consensus 405 l~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 484 (730)
T 1c4k_A 405 LDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGY 484 (730)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTC
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhcccccc
Confidence 9889886554 4566778888999999999976457888865431 0 0
Q ss_pred -------CCceEEEEEec------------CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEE
Q psy15216 1686 -------IPHNLNISFNF------------IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRF 1744 (2602)
Q Consensus 1686 -------~~~~~~~~~~~------------~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRl 1744 (2602)
-|.-..+..++ .+...+...| +||.+... ..+.+|+
T Consensus 485 ~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~-----------------------~~~~ir~ 541 (730)
T 1c4k_A 485 GDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKS-----------------------DLNSILF 541 (730)
T ss_dssp CTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEE-----------------------CSSEEEE
T ss_pred CCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEEC-----------------------CCCeEEE
Confidence 01113333332 2334555555 56655421 1267999
Q ss_pred ecCCCCCHHHHHHHHHHHHH
Q psy15216 1745 TIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1745 s~~~~~t~edid~li~~L~~ 1764 (2602)
+++.++|.+++++++++|++
T Consensus 542 ~~s~g~t~e~i~~Ll~aL~~ 561 (730)
T 1c4k_A 542 LMTPAETPAKMNNLITQLLQ 561 (730)
T ss_dssp ECCTTCCHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999987
No 389
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.82 E-value=1.3e-20 Score=245.94 Aligned_cols=314 Identities=13% Similarity=0.047 Sum_probs=215.8
Q ss_pred CCCCCCCHHHHHHHHHHHhhh--cCCCCCCCcchhhhHHHHHHHHHHHHHHHh-CC--CCCcEEE--eCCHHHHHHHHHH
Q psy15216 4 SATTPIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLI-YA--DPREIIW--TSGATESNNLAIK 76 (2602)
Q Consensus 4 a~~~~~p~~v~~a~~~~l~~~--~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~-g~--~~~~Iv~--t~g~T~al~~~~~ 76 (2602)
.+.+++++.+.+++.+.+... ..++. .....++|+++++++ +. ++++|++ |+|+++|+++++.
T Consensus 40 ~~~~~~~~~v~~a~~~~~~~~~~~~y~~----------~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~ 109 (394)
T 2ay1_A 40 TGHTPIMRAVHAAEQRMLETETTKTYAG----------LSGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALE 109 (394)
T ss_dssp TSCCCCCHHHHHHHHHHHHHCCCCCCCC----------SSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHH
T ss_pred CCCccCcHHHHHHHHHhcCCcccCCCCC----------CCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHH
Confidence 334467899999998877531 11211 112467888899887 55 6789999 9999999999998
Q ss_pred hcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccC--CCCccChHHHHhhccC---CceEEEEecccCcccc
Q psy15216 77 GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICS---DTILVSVMLVNNEIGV 151 (2602)
Q Consensus 77 ~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~ld~e~l~~~i~~---~tklv~i~~~~npTG~ 151 (2602)
++.. +.+||+|+++.|.|+++...+... |++++.++.+ +++.+|++++++++++ +++++++++|+||||.
T Consensus 110 ~~~~--~~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~ 184 (394)
T 2ay1_A 110 LARM--ANPDLRVFVSDPTWPNHVSIMNFM---GLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGA 184 (394)
T ss_dssp HHHH--HCTTCCEEEEESCCHHHHHHHHHH---TCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCC
T ss_pred HHHh--cCCCCEEEEcCCCChhHHHHHHHc---CCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence 8751 238999999999999987777665 8999999875 5677999999999874 3678888999999999
Q ss_pred ccc---HHHHHHHHHhcCCEEEEecccccccc-------ccc-CCCCC-ccEEEeccccccCCCC--cEEEEE---ecCC
Q psy15216 152 IQP---ILEIGELCRSKGVIFHCDAAQAVGKI-------DIN-IQNYK-VDLMSFSAHKIYGPKG--IGALYI---RRNP 214 (2602)
Q Consensus 152 ~~~---l~~I~~la~~~g~~livD~a~a~g~~-------~~d-l~~~~-~D~~~~S~~K~~Gp~G--~G~l~~---~~~~ 214 (2602)
++| +++|.++|++||+++|+|++|+.... ++. +...+ ..+++.|+||.+|++| +||+++ ++++
T Consensus 185 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~ 264 (394)
T 2ay1_A 185 NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAAT 264 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHH
Confidence 998 45788999999999999999975322 121 22223 2477889999999888 599998 4443
Q ss_pred CCcccceecCCCccccccccCcchhHHHHHHHHHHHH------HHhHHHHHHHHHHHHHHHHHHHhhccC--ceEEeCCC
Q psy15216 215 RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESIE--EIYINGDM 286 (2602)
Q Consensus 215 ~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~------~~~~~~~~~~~~~l~~~l~~~L~~~~~--g~~l~~~~ 286 (2602)
++.+...... ......++++.....++.++|+.. ..+.++..++++++++++.+.|.+..+ ++++..+.
T Consensus 265 ~~~l~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 341 (394)
T 2ay1_A 265 RELAQGAMAF---LNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEH 341 (394)
T ss_dssp HHHHHHHHHH---HHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHC
T ss_pred HHHHHHHHHH---HHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCC
Confidence 3332211100 001112344666666666777632 245778888999999999999877211 24333221
Q ss_pred CCCCCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHH
Q psy15216 287 NNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIK 364 (2602)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~ 364 (2602)
. .. +++ ...+...+...+ +||.+++ .+||+++ ++++++++++++
T Consensus 342 ~---g~--~~~-~~~~~~~~~~~l~~~gi~v~~---------------------------~~Ris~~-~~~~~~i~~~~~ 387 (394)
T 2ay1_A 342 R---GM--FSR-LGATPEQVKRIKEEFGIYMVG---------------------------DSRINIA-GLNDNTIPILAR 387 (394)
T ss_dssp C---SS--EEE-CCCCHHHHHHHHHHHCEECCT---------------------------TCEEEGG-GCCTTTHHHHHH
T ss_pred c---eE--EEe-eCCCHHHHHHHHHhCCEEecC---------------------------CCeEEee-cCCHhhHHHHHH
Confidence 1 11 122 223333443333 5887752 2699998 478999999999
Q ss_pred HHHhh
Q psy15216 365 LLKMK 369 (2602)
Q Consensus 365 ~L~~~ 369 (2602)
+|++.
T Consensus 388 ~l~~~ 392 (394)
T 2ay1_A 388 AIIEV 392 (394)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 99864
No 390
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.82 E-value=7.7e-20 Score=246.12 Aligned_cols=284 Identities=12% Similarity=0.049 Sum_probs=195.6
Q ss_pred CCcEEEeCCHHHHHHHHHHhcccc-cccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccC----CCCccChHHHHhh
Q psy15216 58 PREIIWTSGATESNNLAIKGAAHF-YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK----NNGLITLSQLEEK 132 (2602)
Q Consensus 58 ~~~Iv~t~g~T~al~~~~~~l~~~-~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~----~~~~ld~e~l~~~ 132 (2602)
+++|++|+|+|+|+++++.++... .+++||+|+++.|+|+++...+... |+.++.++++ .++.+|+++|+++
T Consensus 164 ~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~d~~~l~~~ 240 (533)
T 3f6t_A 164 QTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELK---DYELVEVDLHSYEKNDWEIEPNEIEKL 240 (533)
T ss_dssp GEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGG---GSEEEEECCCEETTTTSEECHHHHHHH
T ss_pred cceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHc---CCeEEEEEecCCcccCCCCCHHHHHHH
Confidence 368999999999999999983100 1389999999999999976655544 8899998875 3578999999999
Q ss_pred ccCCceEEEEecccCcccccccHH---HHHHHHH-hcCCEEEEecccccccc-cccCC--CCCccEEEeccccccCCCC-
Q psy15216 133 ICSDTILVSVMLVNNEIGVIQPIL---EIGELCR-SKGVIFHCDAAQAVGKI-DINIQ--NYKVDLMSFSAHKIYGPKG- 204 (2602)
Q Consensus 133 i~~~tklv~i~~~~npTG~~~~l~---~I~~la~-~~g~~livD~a~a~g~~-~~dl~--~~~~D~~~~S~~K~~Gp~G- 204 (2602)
+++++++|++++|+||||.++|.+ +|+++|+ +||+++|+|++|+.... ...+. ..+.++++.|+||.+|++|
T Consensus 241 l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 320 (533)
T 3f6t_A 241 KDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGW 320 (533)
T ss_dssp SCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGG
T ss_pred hCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCccc
Confidence 999999999999999999999977 7778888 68999999999874221 11111 1234699999999999888
Q ss_pred -cEEEEEecC-----CCCccccee-------cC------------------CCccccccccCcchhHHHHHH-HHHHHH-
Q psy15216 205 -IGALYIRRN-----PRTRIEAQI-------HG------------------GGHEYGLRSGTLATHQIVGMG-EAFRLA- 251 (2602)
Q Consensus 205 -~G~l~~~~~-----~~~~l~~~~-------~g------------------~~~~~~~~~gt~~~~~~~al~-~al~~~- 251 (2602)
+||++++++ ++..+.+.. ++ .........++++.+...++. .++..+
T Consensus 321 RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~ 400 (533)
T 3f6t_A 321 RLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLL 400 (533)
T ss_dssp CEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHT
T ss_pred ceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHh
Confidence 899999987 444432100 00 000111223344544444421 123322
Q ss_pred --------HHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc-----------------cChhHH
Q psy15216 252 --------RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-----------------IEGESL 306 (2602)
Q Consensus 252 --------~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-----------------~~~~~~ 306 (2602)
..+.++.+++++++++.+.+.|. + ++....+.. .....+.++. .+..++
T Consensus 401 ~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~--~-~~~~~~~~~---g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~ 474 (533)
T 3f6t_A 401 TSTNGGSDDPYIDIARKLVSERYDQLHDAMQ--A-PKDETDTNT---HYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDF 474 (533)
T ss_dssp TCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT--C-CCCCSTTBC---CSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHH
T ss_pred hhccccchHHHHHHHHHHHHHHHHHHHHhcC--C-CccccCCCc---eEEEEEehHhhhhhccchHHHHHhhccCCHHHH
Confidence 24567788888888999998884 2 333322211 1223333332 133445
Q ss_pred HHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 307 LMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 307 ~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+..+ +||.+.+|..|..+ .+++|+|++. .++++++.++++|++.
T Consensus 475 ~~~ll~~~GV~v~pg~~f~~~------------------~~~iRls~a~-~~~e~i~~~i~~L~~~ 521 (533)
T 3f6t_A 475 LLKLAEKNGVVLVDGVGFGAK------------------PGELRVSQAN-LPTEDYALIGKQVLEL 521 (533)
T ss_dssp HHHHHHHTTSSSCTTEEECSS------------------TTEEEEESSS-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEeCCcccCCC------------------CCEEEEEEee-CCHHHHHHHHHHHHHH
Confidence 4444 69999999888653 3799999964 4789999999999964
No 391
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.82 E-value=7e-20 Score=241.08 Aligned_cols=312 Identities=11% Similarity=0.024 Sum_probs=215.6
Q ss_pred CCCCCHHHHHHHHHHHhh-ccCCCCCccchhHHHHHHHHHHHHHHHHHHh-CC-CCC---cEEEeCCHHHHHHHHHHhhh
Q psy15216 1402 TTPIDPRVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQLI-YA-DPR---EIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~-~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~-g~-~~~---~iv~t~gaT~al~~al~~l~ 1475 (2602)
..+.++.+.+++.+.... ...++.. ....++|+++++++ +. .++ +|++|+|+++|+..++.++.
T Consensus 54 ~~~~~~~v~~a~~~~~~~~~~~y~~~----------~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~ 123 (418)
T 3rq1_A 54 NLVFLKTVKEEYLSLSDSEHVGYAPI----------AGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYT 123 (418)
T ss_dssp CBCCCHHHHHHHHTCCHHHHHSCCCT----------TCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHS
T ss_pred CccccHHHHHHHHHhcccccCCCCCC----------CChHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhc
Confidence 456777888887665432 2222221 01356778888866 22 255 89999999999999999987
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccC-CCCCcChhHHHhhccC----Cce-EEEEecc-ccccccc
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICS----DTI-LVSVMLV-NNEIGVI 1548 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~-~~~~id~d~l~~~i~~----~t~-lv~l~~~-~n~tG~~ 1548 (2602)
++||+|+++.|.|+++...+... |++++.++.+ .++.+|+++|++++++ +++ ++++++| +||||.+
T Consensus 124 ----~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~ 196 (418)
T 3rq1_A 124 ----EPGDEVLTADWYWGAYRVICSDT---GRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYS 196 (418)
T ss_dssp ----CTTCEEEEESSCCTHHHHHHHHT---TCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCC
T ss_pred ----CCCCEEEECCCCchhHHHHHHHc---CCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCC
Confidence 89999999999999988766555 9999999985 4568999999999985 666 8889999 9999999
Q ss_pred cChHH---HHHHhh------hcCCEEEEecccccCcc------c--ccCCCCCcc---EEEEccccccCCCc--eEEEEE
Q psy15216 1549 QPILE---IGELCR------SKGVIFHCDAAQAVGKI------D--INIQNYKVD---LMSFSAHKIYGPKG--IGALYI 1606 (2602)
Q Consensus 1549 ~~l~~---I~~ia~------~~gi~vivD~a~~~g~~------~--~~l~~~~~D---~~v~S~~K~~gp~G--~G~l~~ 1606 (2602)
+|.++ |+++|+ +||+++|+|++|..... + ........+ +++.|+||.+|++| +||+++
T Consensus 197 ~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~ 276 (418)
T 3rq1_A 197 IEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIG 276 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEE
Confidence 99555 455555 89999999999742111 1 111222333 77789999888777 799998
Q ss_pred ---ecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhhcCCcEE
Q psy15216 1607 ---RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESIEEIY 1677 (2602)
Q Consensus 1607 ---~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~------~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~ 1677 (2602)
++++++.+....... ......+++...+.++..+++.. .....+.++++.++++++.+.|.+ . ++.
T Consensus 277 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~ 351 (418)
T 3rq1_A 277 ISDDEEIADEFFEVNKST---SRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQ-V-GLP 351 (418)
T ss_dssp EESSHHHHHHHHHHHHHH---HHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-TCC
T ss_pred EeCCHHHHHHHHHHHHHH---HhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-CCC
Confidence 666665554321100 00001245666666666666421 223456677888889999999987 3 555
Q ss_pred EeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHH
Q psy15216 1678 INGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 1755 (2602)
Q Consensus 1678 i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edi 1755 (2602)
+..+... .++++...+..++...| +||.+++|. +++|||++ ..+.+++
T Consensus 352 ~~~~~~~-----~~~~~~~~~~~~~~~~l~~~gi~v~~g~------------------------~~iRis~~-~~~~~~i 401 (418)
T 3rq1_A 352 MLPYRGG-----FFITIPTDSANAICEELKKEHIYVIALA------------------------NGIRIAAC-GIPKCQM 401 (418)
T ss_dssp CCCCCSS-----SEEEEECTTHHHHHHHHHHTTEECEECS------------------------SEEEEEGG-GSCHHHH
T ss_pred CCCCCce-----EEEEcCCCCHHHHHHHHHhCCEEEecCC------------------------CCeEEEEe-cCCHHHH
Confidence 4432211 12333334566666666 899998762 67999987 4589999
Q ss_pred HHHHHHHHHh
Q psy15216 1756 DFTIKLLKMK 1765 (2602)
Q Consensus 1756 d~li~~L~~~ 1765 (2602)
++++++|++.
T Consensus 402 ~~~~~~l~~~ 411 (418)
T 3rq1_A 402 TGLAEKIYNA 411 (418)
T ss_dssp TTHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999973
No 392
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.82 E-value=2.5e-20 Score=218.12 Aligned_cols=138 Identities=54% Similarity=0.830 Sum_probs=128.3
Q ss_pred eccccccceEeeeccEEEEEEecCCCCCCCcEEEEEeccccccceeeeEeecCccccccCceeeeeEecCCCCCCCCccE
Q psy15216 1011 LDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRAR 1090 (2602)
Q Consensus 1011 ~dv~~~~~gi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~ 1090 (2602)
.||+|++|||++.+|.|.+||+||++||+++++.|+|..|+|+.+.|.||||++..+.+|..||+|.|+|+||.|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEECCCeeEEEEEEEecCCceEEEEEecCCCCCHHHHHhhhhccccCCCchhHHHH
Q psy15216 1091 IKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKNGAIFNENSGISLCDALL 1150 (2602)
Q Consensus 1091 i~v~f~~d~~g~l~v~a~~~~~g~~~~~~~~~~~~l~~~~i~~~~~~~~~~g~~~~~~~~ 1150 (2602)
|+|+|+||.||+|+|+|.+..||++..++|....+||++||++++ ++++-+..-+...
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~Ls~eei~~~~--~~~~~~~~~D~~~ 138 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASMI--KDSMSYAEQDVKA 138 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSCCCHHHHHHHH--HHHHHTHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEeccCCCHHHHHHHH--HHHHhhhcccHHH
Confidence 999999999999999999999999999999998889999999976 6555554444443
No 393
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.82 E-value=8.4e-20 Score=235.48 Aligned_cols=303 Identities=12% Similarity=0.041 Sum_probs=205.1
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHhccccccc
Q psy15216 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKK 84 (2602)
Q Consensus 6 ~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~-~~~Iv~t~g~T~al~~~~~~l~~~~~~ 84 (2602)
.+++|+.+++++.. +.+| ....+++++.+++++|++ ++++++++|+|+|+++++.++
T Consensus 39 ~~~~~~~v~~a~~~-----~~~~-----------~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~------ 96 (374)
T 2aeu_A 39 GFLIDEKDKALLNT-----YIGS-----------SYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL------ 96 (374)
T ss_dssp CCCCCHHHHHHHTS-----TTHH-----------HHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH------
T ss_pred CCCCCHHHHHHHHH-----hcCc-----------hHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC------
Confidence 45888888888751 1111 123466778888999983 468999999999999999865
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCCCccChHHHHhhccCCceE-EEEecccCccc-ccccHHHHHHHH
Q psy15216 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTIL-VSVMLVNNEIG-VIQPILEIGELC 162 (2602)
Q Consensus 85 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tkl-v~i~~~~npTG-~~~~l~~I~~la 162 (2602)
+||+|+++.++|++....+..++..|++++.+ .|+++++++ +++|++ |++++|+|||| ...++++|.++|
T Consensus 97 ~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~ 168 (374)
T 2aeu_A 97 KPKKVIHYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-IDKDTLVIITGSTMDLKVIELENFKKVINTA 168 (374)
T ss_dssp CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-CCTTEEEEEECBCTTSCBCCHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-CCCccEEEEEccCCCCCCCCcccHHHHHHHH
Confidence 79999999999988766555556679999888 389999998 888999 99999999999 899999999999
Q ss_pred HhcCCEEEEecccccccc-cc-c--CCCCCccEEEeccccccCCCCcEEEEEecCCCCcccceecCCCccccccccCcch
Q psy15216 163 RSKGVIFHCDAAQAVGKI-DI-N--IQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238 (2602)
Q Consensus 163 ~~~g~~livD~a~a~g~~-~~-d--l~~~~~D~~~~S~~K~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~ 238 (2602)
++||+++|+|++|+.+.. +. . ...+++|++++|+||.++..++||+++++++++.+.+... ...++++.
T Consensus 169 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~~~~~~l~~~~~-------~~~~~~~~ 241 (374)
T 2aeu_A 169 KNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGT-------KFGLEAQP 241 (374)
T ss_dssp HHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHH-------TTTCBCCH
T ss_pred HHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECHHHHHHHHHhhc-------cccCCCCH
Confidence 999999999999876531 11 1 1124679999999996543468999999887777654331 11235666
Q ss_pred hHHHHHHHHHHHHHH-hHHHHHHHHHHH----HHHHHHHHhhcc---CceEEeCCCCCCCCceEEEEE-cccCh------
Q psy15216 239 HQIVGMGEAFRLARI-EMKEELKRILFL----QKRLYNGLMESI---EEIYINGDMNNRIPHNLNISF-NFIEG------ 303 (2602)
Q Consensus 239 ~~~~al~~al~~~~~-~~~~~~~~~~~l----~~~l~~~L~~~~---~g~~l~~~~~~~~~~~~~~~~-~~~~~------ 303 (2602)
....++.++++.... .+....+..+.+ ++.+.+.|.. + +|+.+..++ ..+.+.. ...+.
T Consensus 242 ~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~g~~~~~~~-----~g~~~~~~~~~~~~~~~~~ 315 (374)
T 2aeu_A 242 PLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKA-IDDNINIVYERTP-----TGFVIKRVYKDDTINIKKL 315 (374)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTT-TCTTEEEEEEECS-----SEEEEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccCcceeeCC-----ceEEEEeecccccccccch
Confidence 677777777763211 223333333333 4555555543 2 355543222 2222222 21111
Q ss_pred hHHHHH-h--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCC-CCCHHHHHHHHHHHHhh
Q psy15216 304 ESLLMA-I--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR-FTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 304 ~~~~~~-L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~-~~t~edid~li~~L~~~ 369 (2602)
.++... + +||.+++|..+.. ..+++||+++. ..++.++++++++|++.
T Consensus 316 ~~~~~~ll~~~gV~v~~g~~~~~------------------~~~~lRi~~~~~~~~~~~l~~l~~~l~~~ 367 (374)
T 2aeu_A 316 IEIGFNLLKNYGIITITVAGMPG------------------ASKSLRIDLTSRDAERIDDNYIIKAIVES 367 (374)
T ss_dssp HHHHHHHHHHHCEECSTTSSSCS------------------SCCSEEEETTSGGGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEecCCCCCC------------------CCCeEEEEcCCchHHHHHHHHHHHHHHHH
Confidence 113322 2 5999998765421 13689999974 22333588998888763
No 394
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.82 E-value=7.6e-20 Score=200.85 Aligned_cols=125 Identities=39% Similarity=0.638 Sum_probs=120.0
Q ss_pred eeccccccceEEeeccEEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCCCCCcc
Q psy15216 2406 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 2485 (2602)
Q Consensus 2406 ~~d~~~~~~gi~~~~~~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~ 2485 (2602)
+.|++|++||+++.+|.|.+||+||++||++++..|++..|||+.+.|.||||++..+.+|..||+|.|+++||.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCccEEEEEEeecCCcEEEEEEecC-CCCChHHHhcc
Q psy15216 2486 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPF-YNMNLDEIKNG 2530 (2602)
Q Consensus 2486 ~i~v~f~id~~g~l~V~a~~~~tg~~~~~~i~~~-~~l~~~ei~~~ 2530 (2602)
+|+|+|+||.||+|+|+|.++.||++..++|... ++||++||++.
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~ 127 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERM 127 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHH
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHH
Confidence 9999999999999999999999999999999887 67999999963
No 395
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.82 E-value=2e-20 Score=244.50 Aligned_cols=317 Identities=15% Similarity=0.105 Sum_probs=214.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHh---C---CCCCcEEE--eCCHHHHHHH
Q psy15216 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI---Y---ADPREIIW--TSGATESNNL 73 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~---g---~~~~~Iv~--t~g~T~al~~ 73 (2602)
|..+.+++++.+.+++.+.+... ..+ .|. ......++|+++++++ + +++++|++ |+|+++|+++
T Consensus 38 ~~~~~~~~~~~v~~a~~~~~~~~--~~~--~y~----~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~ 109 (396)
T 2q7w_A 38 DETGKTPVLTSVKKAEQYLLENE--TTK--NYL----GIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRV 109 (396)
T ss_dssp CTTSCCCCCHHHHHHHHHHHHHC--CCC--CCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHH
T ss_pred CCCCCccCcHHHHHHHHhhcCcc--ccc--CCC----CCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHH
Confidence 34445577899999998877541 100 011 1123467888899888 3 24788998 9999999999
Q ss_pred HHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccC--CCCccChHHHHhhccC---CceEEEEecccCc
Q psy15216 74 AIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICS---DTILVSVMLVNNE 148 (2602)
Q Consensus 74 ~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~ld~e~l~~~i~~---~tklv~i~~~~np 148 (2602)
++.++. .+.+||+|+++.|.|+++...+... |++++.++.+ +++.+|++++++++++ +++++++++|+||
T Consensus 110 ~~~~~~--~~~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~np 184 (396)
T 2q7w_A 110 AADFLA--KNTSVKRVWVSNPSWPNHKSVFNSA---GLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNP 184 (396)
T ss_dssp HHHHHH--HHSCCCEEEEEESCCTHHHHHHHHT---TCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred HHHHHH--HhCCCCEEEEcCCCchhHHHHHHHc---CCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 998764 1258999999999999987766654 9999999875 5678999999999974 4789999999999
Q ss_pred ccccccH---HHHHHHHHhcCCEEEEecccccccc-------ccc-CCCC-CccEEEeccccccCCCC--cEEEEE---e
Q psy15216 149 IGVIQPI---LEIGELCRSKGVIFHCDAAQAVGKI-------DIN-IQNY-KVDLMSFSAHKIYGPKG--IGALYI---R 211 (2602)
Q Consensus 149 TG~~~~l---~~I~~la~~~g~~livD~a~a~g~~-------~~d-l~~~-~~D~~~~S~~K~~Gp~G--~G~l~~---~ 211 (2602)
||.++|. ++|+++|++||+++|+|++|+.... ++. +... +.++++.|+||.+|++| +||+++ +
T Consensus 185 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~ 264 (396)
T 2q7w_A 185 TGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAAD 264 (396)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCC
Confidence 9999874 5788999999999999999874321 111 1111 24588899999999888 699997 4
Q ss_pred cCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHH------HHhHHHHHHHHHHHHHHHHHHHhhccC--ceEEe
Q psy15216 212 RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESIE--EIYIN 283 (2602)
Q Consensus 212 ~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~------~~~~~~~~~~~~~l~~~l~~~L~~~~~--g~~l~ 283 (2602)
++.++.+...... ......++++..+..++.++|+.. ..++++..++++++++++.+.|.+..+ ++++.
T Consensus 265 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 341 (396)
T 2q7w_A 265 SETVDRAFSQMKA---AIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFI 341 (396)
T ss_dssp HHHHHHHHHHHHH---HHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHH
T ss_pred HHHHHHHHHHHHH---HHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee
Confidence 4222222111100 001122345666666666666532 245677888889999999999987211 24433
Q ss_pred CCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHH
Q psy15216 284 GDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDF 361 (2602)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~ 361 (2602)
.+... . +.+...+...+...+ +||.+++ .+||+++.. +++++++
T Consensus 342 ~~~~~---~---~~~~~~~~~~~~~~l~~~gv~v~~---------------------------~~Ris~~~~-~~e~i~~ 387 (396)
T 2q7w_A 342 IKQNG---M---FSFSGLTKEQVLRLREEFGVYAVA---------------------------SGRVNVAGM-TPDNMAP 387 (396)
T ss_dssp HHCCS---S---EEECCCCHHHHHHHHHHHCEECCT---------------------------TCEEEGGGC-CTTTHHH
T ss_pred cCCCc---e---EEEecCCHHHHHHHHHhcCeeecC---------------------------CceEEEeec-CHHHHHH
Confidence 22211 1 222223333333333 5887752 269999854 8899999
Q ss_pred HHHHHHh
Q psy15216 362 TIKLLKM 368 (2602)
Q Consensus 362 li~~L~~ 368 (2602)
++++|++
T Consensus 388 ~~~~l~~ 394 (396)
T 2q7w_A 388 LCEAIVA 394 (396)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999985
No 396
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.71 E-value=7.8e-22 Score=257.25 Aligned_cols=315 Identities=15% Similarity=0.156 Sum_probs=225.0
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHH----hC--CCCCcEEEeCCHHHHHHHHHHhcccc
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQL----IY--ADPREIIWTSGATESNNLAIKGAAHF 81 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~----~g--~~~~~Iv~t~g~T~al~~~~~~l~~~ 81 (2602)
++|+.+.+++.+.+... .+.+... ..++|+.++++ +| +++++|++++|+++|+.+++.++.
T Consensus 44 ~~~~~v~~a~~~~~~~~-------~~~y~~~----~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-- 110 (392)
T 3b1d_A 44 EVMPEVKQAIHDYAEQL-------VYGYTYA----SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT-- 110 (392)
Confidence 56778888888877431 0111111 34455555554 45 567899999999999999999987
Q ss_pred cccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC---CCccChHHHHhhcc-CCceEEEEecccCccccccc---
Q psy15216 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN---NGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQP--- 154 (2602)
Q Consensus 82 ~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~---~~~ld~e~l~~~i~-~~tklv~i~~~~npTG~~~~--- 154 (2602)
++||+|+++.+.|+++...+... |++++.++.++ ++.+|+++++++++ ++++++++++|+||||.++|
T Consensus 111 --~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~ 185 (392)
T 3b1d_A 111 --KEGEAVLINSPVYPPFARSVRLN---NRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREV 185 (392)
Confidence 78999999999999988776655 88888888753 24589999999997 78999999999999999987
Q ss_pred HHHHHHHHHhcCCEEEEecccccccc----cccC---CC--CCccEEEeccccccCCCC--cEEEEEecC-CCCccccee
Q psy15216 155 ILEIGELCRSKGVIFHCDAAQAVGKI----DINI---QN--YKVDLMSFSAHKIYGPKG--IGALYIRRN-PRTRIEAQI 222 (2602)
Q Consensus 155 l~~I~~la~~~g~~livD~a~a~g~~----~~dl---~~--~~~D~~~~S~~K~~Gp~G--~G~l~~~~~-~~~~l~~~~ 222 (2602)
+++|.++|++||+++|+|++|+.... ...+ .. .+.++++.|+||.+|++| +||++++++ +++.+....
T Consensus 186 l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 265 (392)
T 3b1d_A 186 LEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQ 265 (392)
Confidence 88899999999999999999975321 1122 11 345688899999888776 799998754 777776443
Q ss_pred cCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--
Q psy15216 223 HGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-- 300 (2602)
Q Consensus 223 ~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-- 300 (2602)
.. +..++++.+...++.++|+....++++.++++.++++++.+.|.+.+|++.+..+... ...++.++.
T Consensus 266 ~~------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~i~~~~~~ 336 (392)
T 3b1d_A 266 LV------NNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGT---YLIWLDFSDYG 336 (392)
Confidence 21 1123456666666667776434567788888888999999888663467766544322 112233432
Q ss_pred cChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q psy15216 301 IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 301 ~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~ 368 (2602)
.+..++...| +||.+++|..|.+. ..+++||+++. +++++++++++|++
T Consensus 337 ~~~~~l~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRi~~~~--~~e~i~~~l~~l~~ 388 (392)
T 3b1d_A 337 LTDDALFTLLHDQAKVILNRGSDYGSE-----------------GELHARLNIAA--PKSLVEEICKRIVC 388 (392)
Confidence 2445566555 48999888765421 13789999875 67899999999885
No 397
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.82 E-value=1.2e-18 Score=225.92 Aligned_cols=303 Identities=17% Similarity=0.229 Sum_probs=211.6
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhc---cC
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK---KR 1481 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~---~~ 1481 (2602)
.++.+.+++.+.++.. +++.. .|. .....++++++++++|+ ++++++|+|+|+|+.+++.++. ... ++
T Consensus 45 ~~~~v~~a~~~~~~~~-~~~~~-~y~-----~~~~~~l~~~la~~~g~-~~~v~~~~g~t~a~~~~~~~~~-~~~~~~~~ 115 (375)
T 2eh6_A 45 AYPKLTEALKEQVEKL-LHVSN-LYE-----NPWQEELAHKLVKHFWT-EGKVFFANSGTESVEAAIKLAR-KYWRDKGK 115 (375)
T ss_dssp SCHHHHHHHHHHHHHC-SCCCT-TBC-----CHHHHHHHHHHHHTSSS-CEEEEEESSHHHHHHHHHHHHH-HHHHHTTC
T ss_pred CCHHHHHHHHHHHHhc-cccCc-ccC-----CHHHHHHHHHHHhhcCC-CCeEEEeCchHHHHHHHHHHHH-HHhccCCC
Confidence 6788999999988653 23322 121 12457889999999998 4789999999999999988641 112 57
Q ss_pred C-CEEEEcCCCCcchHHHHHHHHhC-----CcE-----EEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccC
Q psy15216 1482 G-KHIITVQTEHKSVLDSIRKLEND-----GFR-----VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP 1550 (2602)
Q Consensus 1482 g-d~Vlv~~~~~~s~~~~~~~~~~~-----G~~-----v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~ 1550 (2602)
| |+|++++++|+++...+..+... |.. +..++. .|+++|++++++++++|++++++||||.+.|
T Consensus 116 g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~ 190 (375)
T 2eh6_A 116 NKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLDEETAGIIIEVIQGEGGVNEA 190 (375)
T ss_dssp CCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCCTTEEEEEECSEETTTTSEEC
T ss_pred CCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhcCCeEEEEEeCccCCCCCcCC
Confidence 8 99999999988876655444111 111 333332 5899999999999999999999999999988
Q ss_pred ----hHHHHHHhhhcCCEEEEecccc-cCccc--ccCCCCC--ccEEEEcccccc-CCCceEEEEEecCCCCcccccccc
Q psy15216 1551 ----ILEIGELCRSKGVIFHCDAAQA-VGKID--INIQNYK--VDLMSFSAHKIY-GPKGIGALYIRRNPRTRIEAQIHG 1620 (2602)
Q Consensus 1551 ----l~~I~~ia~~~gi~vivD~a~~-~g~~~--~~l~~~~--~D~~v~S~~K~~-gp~G~G~l~~~~~~~~~l~~~~~g 1620 (2602)
+++|.++|++||+++|+|++|+ ++... +++..++ +|++++| |.+ ++.++|++++++++++.+.+...+
T Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~~~~~~~~~~~~~~~ 268 (375)
T 2eh6_A 191 SEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALA--KGLGGGVPIGAILAREEVAQSFTPGSHG 268 (375)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEEEHHHHTTCCTTSCC
T ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEc--ccccCCCCeEEEEEcHHHHhhhcCCCCC
Confidence 9999999999999999999998 55432 2333444 7887544 844 445589999998776666542211
Q ss_pred CCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecCCcH
Q psy15216 1621 GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGE 1700 (2602)
Q Consensus 1621 ~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~ 1700 (2602)
...++ +...+.++.++|+... +..++.+++++++.+.|.+ ++.....+ ......+.++. +..
T Consensus 269 ------~~~~~-~~~~~~~~~~~l~~~~----~~~~~~~~~~~~l~~~L~~-~~~~~~~~-----~g~~~~~~~~~-~~~ 330 (375)
T 2eh6_A 269 ------STFGG-NPLACRAGTVVVDEVE----KLLPHVREVGNYFKEKLKE-LGKGKVKG-----RGLMLGLELER-ECK 330 (375)
T ss_dssp ------CSSTT-CHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH-TTSSEEEE-----ETTEEEEECSS-CCH
T ss_pred ------CCCCC-CHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH-HhcCCceE-----EEEEEEEEEcC-cHH
Confidence 11233 3444444446666433 6677888889999999987 43311111 12233333332 455
Q ss_pred HHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1701 SLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1701 ~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
++...| +||.++++. .+++|++++..++.+++++++++|++
T Consensus 331 ~~~~~l~~~gi~~~~~~-----------------------~~~iRi~~~~~~~~~~i~~~~~~l~~ 373 (375)
T 2eh6_A 331 DYVLKALEKGLLINCTA-----------------------GKVLRFLPPLIIQKEHIDRAISVLRE 373 (375)
T ss_dssp HHHHHHHHTTEECEEET-----------------------TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEecCC-----------------------CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 666655 789887541 17899999988999999999999986
No 398
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.82 E-value=1.6e-20 Score=246.76 Aligned_cols=315 Identities=13% Similarity=0.053 Sum_probs=216.3
Q ss_pred CCCCCCCCCCHHHHHHHHH-HHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHh-C-----CCCCcEEE--eCCHHHHH
Q psy15216 1 MDYSATTPIDPRVVDKMIP-YLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI-Y-----ADPREIIW--TSGATESN 71 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~-~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~-g-----~~~~~Iv~--t~g~T~al 71 (2602)
||+++.+++++.+.+++.+ .+... ..+ .|. ......++|+.+++++ + +++++|++ |+|+++|+
T Consensus 40 ~d~~~~~~~~~~v~~a~~~~~~~~~--~~~--~y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~ 111 (412)
T 1yaa_A 40 RDDNGKPWVLPSVKAAEKLIHNDSS--YNH--EYL----GITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGAL 111 (412)
T ss_dssp BCTTSCBCCCHHHHHHHHHHHTCTT--CCC--CCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHH
T ss_pred eCCCCCCCCcHHHHHHHHhhhcCcc--ccc--CCC----CCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHH
Confidence 3566667888999999998 76421 000 011 1112467888888887 3 25789999 99999999
Q ss_pred HHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEecc-CC-CCccChHHHHhhccCC---ceEEEEeccc
Q psy15216 72 NLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP-KN-NGLITLSQLEEKICSD---TILVSVMLVN 146 (2602)
Q Consensus 72 ~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~-~~-~~~ld~e~l~~~i~~~---tklv~i~~~~ 146 (2602)
++++..+. .+.+||+|+++.|.|+++...+.. .|++++.++. ++ ++.+|+++|+++++++ +.++++++|+
T Consensus 112 ~~~~~~~~--~~~~gd~Vl~~~p~~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~ 186 (412)
T 1yaa_A 112 HISAKFFS--KFFPDKLVYLSKPTWANHMAIFEN---QGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAH 186 (412)
T ss_dssp HHHHHHHH--HHCTTCCEEEEESCCTTHHHHHHT---TTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSC
T ss_pred HHHHHHHH--HhCCCCEEEEeCCCCccHHHHHHH---cCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 99854332 125899999999999998766654 4999999987 43 6779999999998643 4566669999
Q ss_pred Cccccccc---HHHHHHHHHhcCCEEEEeccccccc--------ccc-cCCCCC----ccEEEeccccccCCCC--cEEE
Q psy15216 147 NEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGK--------IDI-NIQNYK----VDLMSFSAHKIYGPKG--IGAL 208 (2602)
Q Consensus 147 npTG~~~~---l~~I~~la~~~g~~livD~a~a~g~--------~~~-dl~~~~----~D~~~~S~~K~~Gp~G--~G~l 208 (2602)
||||.++| +++|+++|++||+++|+|++|+... .++ ++...+ .++++.|+||.+|++| +||+
T Consensus 187 nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~ 266 (412)
T 1yaa_A 187 NPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCF 266 (412)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEE
Confidence 99999987 5568888999999999999985321 122 222222 3578889999999988 6999
Q ss_pred E--E-----ecC----CCCcccceecCCCccccccccCcchhHHHHHHHHHHHH------HHhHHHHHHHHHHHHHHHHH
Q psy15216 209 Y--I-----RRN----PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYN 271 (2602)
Q Consensus 209 ~--~-----~~~----~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~------~~~~~~~~~~~~~l~~~l~~ 271 (2602)
+ + +++ +++.+.... ....++++.....++.++|+.. ..++++.+++++++++++.+
T Consensus 267 ~~~~~~~~~~~~~~~~l~~~l~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 339 (412)
T 1yaa_A 267 HLALTKQAQNKTIKPAVTSQLAKII-------RSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRD 339 (412)
T ss_dssp EEECCSCTTHHHHHHHHHHHHHHHH-------HTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHH-------hhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 6 444 444443311 1122355666677777777632 24678889999999999999
Q ss_pred HHhhccC--ceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEE
Q psy15216 272 GLMESIE--EIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (2602)
Q Consensus 272 ~L~~~~~--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (2602)
.|.+..+ ++.+..+... .+.+...+...+...+ +||.+++ ++|
T Consensus 340 ~L~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~gi~v~~---------------------------~~R 386 (412)
T 1yaa_A 340 HLVKLGTPGNWDHIVNQCG------MFSFTGLTPQMVKRLEETHAVYLVA---------------------------SGR 386 (412)
T ss_dssp HHHHHTCSSCCTHHHHCCS------SEEECCCCHHHHHHHHHHHCEECCT---------------------------TSE
T ss_pred HHHhhCCCCCeeeeccCce------EEEeeCCCHHHHHHHHHhCCEEecc---------------------------CcE
Confidence 9987211 2444332211 1223333444443333 5787752 379
Q ss_pred EecCCCCCHHHHHHHHHHHHhh
Q psy15216 348 FTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 348 is~~~~~t~edid~li~~L~~~ 369 (2602)
|+++. .+++++++++++|++.
T Consensus 387 is~~~-~~~~~i~~~~~~l~~~ 407 (412)
T 1yaa_A 387 ASIAG-LNQGNVEYVAKAIDEV 407 (412)
T ss_dssp EEGGG-CCTTTHHHHHHHHHHH
T ss_pred EEEcc-CCHhHHHHHHHHHHHH
Confidence 99984 5899999999999864
No 399
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.81 E-value=4.5e-19 Score=231.55 Aligned_cols=306 Identities=13% Similarity=0.117 Sum_probs=216.6
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCC
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~g 86 (2602)
+++|+.+.+++.+.+.... +... .+ ..+..++++++++++++++++++++++|+++|+++++.++.. +.+|
T Consensus 60 g~~~~~v~~a~~~~~~~~~-~~~~-~~-----~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~--~~~~ 130 (395)
T 1vef_A 60 GHGNPEVVEAVKRQAETLM-AMPQ-TL-----PTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARA--HTGR 130 (395)
T ss_dssp CBTCHHHHHHHHHHHHHCC-CCCT-TS-----CCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHH--HHSC
T ss_pred CCCCHHHHHHHHHHHHhCC-CCcc-cc-----CCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHH--HhCC
Confidence 4588999999999987532 2111 11 234678999999999988778999999999999999987631 2478
Q ss_pred CEEEEcCCCCcccH-HHHHHHHhCCcE------------EEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccc
Q psy15216 87 KHIITVQTEHKSVL-DSIRKLENDGFR------------VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQ 153 (2602)
Q Consensus 87 d~Vlv~~~~~~s~~-~~~~~~~~~G~~------------v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~ 153 (2602)
|+|+++++.|++.. .++... |.+ +..++ ..|+++|++++++++++|++++++||||.+.
T Consensus 131 ~~vi~~~~~y~~~~~~~~~~~---g~~~~~~~~~p~~~~~~~~~-----~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~ 202 (395)
T 1vef_A 131 KKFVAAMRGFSGRTMGSLSVT---WEPKYREPFLPLVEPVEFIP-----YNDVEALKRAVDEETAAVILEPVQGEGGVRP 202 (395)
T ss_dssp CEEEEETTCCCCSSHHHHHTC---CCHHHHGGGCSCSSCEEEEC-----TTCHHHHHHHCCTTEEEEEECSEETTTTSEE
T ss_pred CeEEEEcCCcCCCchhhhhhc---CCcccccccCCCCCCeeEeC-----CCcHHHHHHHhccCEEEEEEeCccCCCCccC
Confidence 89999999887643 344332 433 23332 2489999999999999999988899999998
Q ss_pred c----HHHHHHHHHhcCCEEEEecccc-cccc----cccCCCCCccEEEeccccccCC-CCcEEEEEecCCCCcccceec
Q psy15216 154 P----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGP-KGIGALYIRRNPRTRIEAQIH 223 (2602)
Q Consensus 154 ~----l~~I~~la~~~g~~livD~a~a-~g~~----~~dl~~~~~D~~~~S~~K~~Gp-~G~G~l~~~~~~~~~l~~~~~ 223 (2602)
| +++|.++|++||+++|+|++|+ ++.. +++.....+|++ |+||.+++ .++|++++++++++.+.+..
T Consensus 203 ~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~~~~~~l~~~~- 279 (395)
T 1vef_A 203 ATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMREEVARSMPKGG- 279 (395)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEHHHHHTSCTTS-
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEcccccCCCceEEEEehHHHHhhhccCC-
Confidence 8 9999999999999999999998 3211 122233456866 77996653 45899999987666554311
Q ss_pred CCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCc--eEEeCCCCCCCCceEEEEEccc
Q psy15216 224 GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEE--IYINGDMNNRIPHNLNISFNFI 301 (2602)
Q Consensus 224 g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g--~~l~~~~~~~~~~~~~~~~~~~ 301 (2602)
.....+++..+.+++.++++.... ++..++..++++++.+.|.+ ++. +... ++ ...++.+.++.
T Consensus 280 ------~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~-~~---~g~~~~~~~~~- 345 (395)
T 1vef_A 280 ------HGTTFGGNPLAMAAGVAAIRYLER--TRLWERAAELGPWFMEKLRA-IPSPKIREV-RG---MGLMVGLELKE- 345 (395)
T ss_dssp ------SCCSSTTCHHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHT-SCCTTEEEE-EE---ETTEEEEEESS-
T ss_pred ------cCCCcCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH-hhcCceEEE-EE---EEEEEEEEEcC-
Confidence 111235677777777788875443 45678888899999999976 322 1111 11 12344455543
Q ss_pred ChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 302 EGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 302 ~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+..++...| +||.++++. .+++||+++.+++++|+++++++|++.
T Consensus 346 ~~~~l~~~l~~~~gi~v~~~~-----------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~ 393 (395)
T 1vef_A 346 KAAPYIARLEKEHRVLALQAG-----------------------PTVIRFLPPLVIEKEDLERVVEAVRAV 393 (395)
T ss_dssp CSHHHHHHHHHHHCEECEESS-----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCeEEecCC-----------------------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 355565555 488887541 278999999899999999999999853
No 400
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.81 E-value=5.7e-20 Score=238.74 Aligned_cols=279 Identities=14% Similarity=0.112 Sum_probs=198.9
Q ss_pred HHHHHHHHHHhCC-----CC-CcEEEeCCHHHHHHHHHHhcccccccCCC----EEEEcCCCCcccHHHHHHHHhCCcEE
Q psy15216 44 EKARNEVAQLIYA-----DP-REIIWTSGATESNNLAIKGAAHFYKKRGK----HIITVQTEHKSVLDSIRKLENDGFRV 113 (2602)
Q Consensus 44 ~~~r~~lA~~~g~-----~~-~~Iv~t~g~T~al~~~~~~l~~~~~~~gd----~Vlv~~~~~~s~~~~~~~~~~~G~~v 113 (2602)
.++|+++|++++. .+ ++|++|+|+++|+++++.++. ++|| +|++++|.|+++...++.. |+++
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~----~~Gd~~~~~Vlv~~P~y~~~~~~~~~~---g~~~ 143 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALS----SLARSQPVSVVAAAPFYSTYVEETTYV---RSGM 143 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHH----HTSSSSSEEEEECSSCCTHHHHHHHTT---CBTT
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhc----CCCCCCcceEEEcCCCchhHHHHHHHc---CCeE
Confidence 6788888888762 34 589999999999999999997 7999 9999999999987766544 8888
Q ss_pred EEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEeccccccc-ccccCCCCCccEE
Q psy15216 114 TYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGK-IDINIQNYKVDLM 192 (2602)
Q Consensus 114 ~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~-~~~dl~~~~~D~~ 192 (2602)
+.++++.++ ++ .+++++|++++||||||.+++ +|++.++.+++++|+|++|+.+. .++.. ..+.+++
T Consensus 144 ~~~~~d~~~------l~---~~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~~~~l~~-~~~~~i~ 211 (391)
T 3bwn_A 144 YKWEGDAWG------FD---KKGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPHYTPITR-RQDHDIM 211 (391)
T ss_dssp EEEEEESTT------CC---CCSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTTTSCCCC-CBCCSEE
T ss_pred EEecCCHHH------cC---CCCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCCCCcccc-CCCCeEE
Confidence 888765432 22 367999999999999999997 45442222339999999998543 22322 3456899
Q ss_pred EeccccccCCCC--cEEEEE-ecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHH----------HHhHHHHH
Q psy15216 193 SFSAHKIYGPKG--IGALYI-RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA----------RIEMKEEL 259 (2602)
Q Consensus 193 ~~S~~K~~Gp~G--~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~----------~~~~~~~~ 259 (2602)
+.|+||.+|++| +||+++ ++++++.+..... ...++++.+...++..+|+.. ..++++.+
T Consensus 212 ~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~-------~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 284 (391)
T 3bwn_A 212 LFTFSKITGHAGSRIGWALVKDKEVAKKMVEYII-------VNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGR 284 (391)
T ss_dssp EEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHH-------HHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHH
T ss_pred EEechhhcCCCccceEEEEecCHHHHHHHHHHhc-------ccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHH
Confidence 999999999999 599998 7666666654321 113456666666676777743 34578889
Q ss_pred HHHHHHHHHHHHHHhhccCceEEeCCCCCC--------CCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChH
Q psy15216 260 KRILFLQKRLYNGLMESIEEIYINGDMNNR--------IPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPS 329 (2602)
Q Consensus 260 ~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~ 329 (2602)
++++++++++.+.|.+ ++++.+..+.... .+.+.++++...+...+...| +||.+++|..|..
T Consensus 285 ~~~~~~~~~l~~~L~~-~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~------ 357 (391)
T 3bwn_A 285 EMMKNRWEKLREVVKE-SDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCGS------ 357 (391)
T ss_dssp HHHHHHHHHHHHHHHT-CSSEECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECEEGGGGTC------
T ss_pred HHHHHHHHHHHHHHHh-CCCcccccCCccccccccccCCCcceEEEecCCcHHHHHHHHHHCCEEEccCCCCCC------
Confidence 9999999999999988 5777765432211 011112333222223333333 7999999987742
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 330 YVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 330 ~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..+++|||++ ++++++++++++|++.
T Consensus 358 ------------~~~~iRis~~--~~~e~i~~~~~~L~~~ 383 (391)
T 3bwn_A 358 ------------DKKHVRVSML--SREDVFNVFLERLANM 383 (391)
T ss_dssp ------------CTTEEEEESC--SCHHHHHHHHHHHHSC
T ss_pred ------------CCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 1379999998 3889999999999863
No 401
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.81 E-value=1.2e-18 Score=230.06 Aligned_cols=320 Identities=8% Similarity=0.010 Sum_probs=217.1
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccccccc----
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK---- 84 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~---- 84 (2602)
.++.+.+++.+.+.....++.. .+. .+...++++++++++++++++|+|++|+++|+++++.++.. +.+
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~-~~~-----~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~-~~~~~g~ 132 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMSHVMFG-GIT-----HAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQ-YWQAKGE 132 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCCCS-SEE-----CHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHH-HHHHHTC
T ss_pred CCHHHHHHHHHHHHhccccccc-ccC-----CHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHH-HhcccCC
Confidence 6899999999998764332211 111 12457788899999998888999999999999999987541 112
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHh--------C---CcEEEEeccCC------CCccChHHHHhhcc---CCceEEEEec
Q psy15216 85 RGKHIITVQTEHKSVLDSIRKLEN--------D---GFRVTYLKPKN------NGLITLSQLEEKIC---SDTILVSVML 144 (2602)
Q Consensus 85 ~gd~Vlv~~~~~~s~~~~~~~~~~--------~---G~~v~~v~~~~------~~~ld~e~l~~~i~---~~tklv~i~~ 144 (2602)
||++|+++++.|+.+...+..+.. . ...++.++.+. .+.+|+++|+++++ +++++|+++.
T Consensus 133 ~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p 212 (429)
T 1s0a_A 133 ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEP 212 (429)
T ss_dssp CCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECS
T ss_pred CCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEee
Confidence 689999999988876443322200 0 01244454431 23589999999997 5677777776
Q ss_pred c-cCccccccc----HHHHHHHHHhcCCEEEEecccc-cccc----cccCCCCCccEEEeccccccC-C-CCcEEEEEec
Q psy15216 145 V-NNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYG-P-KGIGALYIRR 212 (2602)
Q Consensus 145 ~-~npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~----~~dl~~~~~D~~~~S~~K~~G-p-~G~G~l~~~~ 212 (2602)
+ +||||.+.| +++|.++|++||+++|+|++|+ ++.. .++.....+|++ |++|.+| + .++|++++++
T Consensus 213 ~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~G~~~iG~~~~~~ 290 (429)
T 1s0a_A 213 IVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTGGTMTLSATLTTR 290 (429)
T ss_dssp SEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTSSSCCEEEEECH
T ss_pred cccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccCCCccceEEEeCH
Confidence 6 799998887 9999999999999999999997 4422 122223456776 4669554 3 4689999988
Q ss_pred CCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc--cCceEEeCCCCCCC
Q psy15216 213 NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES--IEEIYINGDMNNRI 290 (2602)
Q Consensus 213 ~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~--~~g~~l~~~~~~~~ 290 (2602)
++++.+.+...++. ......+.+.++++++.++++.... +...++..++++++.++|.+. .+++....+.
T Consensus 291 ~~~~~l~~~~~~~~--~~~~t~~~n~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~---- 362 (429)
T 1s0a_A 291 EVAETISNGEAGCF--MHGPTFMGNPLACAAANASLAILES--GDWQQQVADIEVQLREQLAPARDAEMVADVRVL---- 362 (429)
T ss_dssp HHHHHHHTSTTSSC--SCCCTTTTCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEE----
T ss_pred HHHHHhhcCCCccc--ccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEe----
Confidence 76655543100000 0011234577778788788885543 356677888889999998762 2455432221
Q ss_pred CceEEEEEcc-cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 291 PHNLNISFNF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (2602)
Q Consensus 291 ~~~~~~~~~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~ 367 (2602)
..+..+.++. .+..++...| +||.+++. .+++||+++..++++|+++++++|+
T Consensus 363 g~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~------------------------~~~iRis~~~~~t~e~i~~~~~~l~ 418 (429)
T 1s0a_A 363 GAIGVVETTHPVNMAALQKFFVEQGVWIRPF------------------------GKLIYLMPPYIILPQQLQRLTAAVN 418 (429)
T ss_dssp TTEEEEEESSCBCHHHHHHHHHHTTEECCCB------------------------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred eEEEEEEECCcccHHHHHHHHHHCCCEEecc------------------------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 2234455543 3556666666 78888642 1689999999999999999999998
Q ss_pred hh
Q psy15216 368 MK 369 (2602)
Q Consensus 368 ~~ 369 (2602)
+.
T Consensus 419 ~~ 420 (429)
T 1s0a_A 419 RA 420 (429)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 402
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.81 E-value=2.4e-18 Score=224.43 Aligned_cols=308 Identities=16% Similarity=0.168 Sum_probs=217.6
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhh------
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY------ 1478 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~------ 1478 (2602)
.++.+.+++.+.++.....+.. + ......++++++++++| ++++++++|+|+|++.++..+....
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~--~-----~~~~~~~l~~~la~~~g--~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~ 123 (392)
T 3ruy_A 53 RHPKIINALIDQANRVTLTSRA--F-----HSDQLGPWYEKVAKLTN--KEMVLPMNTGAEAVETAIKTARRWAYDVKKV 123 (392)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTT--S-----EETTHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHhccccccc--c-----CCHHHHHHHHHHHHhcC--CCEEEEeCcHHHHHHHHHHHHHHhhhhccCC
Confidence 4789999999988653221111 1 12346789999999998 6699999999999999999775210
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhC-C---------cEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccc
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLEND-G---------FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVI 1548 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~-G---------~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~ 1548 (2602)
...+|+|+++.++|++.......+... + ..+..++. .|+++|++++++++++|++++++||||.+
T Consensus 124 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~~~~nptG~~ 198 (392)
T 3ruy_A 124 EANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-----GDLEALKAAITPNTAAFILEPIQGEAGIN 198 (392)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-----TCHHHHHHHCCTTEEEEEECSSBSTTTSB
T ss_pred CCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-----ccHHHHHHHhccCeEEEEEeCccCCCCCc
Confidence 023679999999998866554433111 0 11333332 28999999999999999999999999999
Q ss_pred cC----hHHHHHHhhhcCCEEEEecccc-cCc----ccccCCCCCccEEEEccccccCC--CceEEEEEecCCCCccccc
Q psy15216 1549 QP----ILEIGELCRSKGVIFHCDAAQA-VGK----IDINIQNYKVDLMSFSAHKIYGP--KGIGALYIRRNPRTRIEAQ 1617 (2602)
Q Consensus 1549 ~~----l~~I~~ia~~~gi~vivD~a~~-~g~----~~~~l~~~~~D~~v~S~~K~~gp--~G~G~l~~~~~~~~~l~~~ 1617 (2602)
+| +++|.++|++||+++|+|++|+ ++. ...+.....+|++++ +|.+++ ..+|++++++++++.+.+.
T Consensus 199 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~--SK~l~gG~~~~G~~~~~~~~~~~~~~~ 276 (392)
T 3ruy_A 199 IPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYIL--GKALGGGVFPISCAAANRDILGVFEPG 276 (392)
T ss_dssp CCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTTSCCEEEEECHHHHTTCCTT
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEE--chhhhCChhhhEEEEECHHHHhhhccC
Confidence 99 9999999999999999999995 332 122233345687755 594332 2279999998776666543
Q ss_pred cccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcEEEeCCCCCCCCceEEEEEec
Q psy15216 1618 IHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESI-EEIYINGDMNNRIPHNLNISFNF 1696 (2602)
Q Consensus 1618 ~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~-~gl~i~~~~~~~~~~~~~~~~~~ 1696 (2602)
..+ ...+.+...+.++.++++.... ++..++.+++++++.+.|.+.. +.+....+ ...+..+.++.
T Consensus 277 ~~~-------~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~g~~~~~~~~~ 343 (392)
T 3ruy_A 277 SHG-------STFGGNPLACAVSIAALEVLEE--EKLTERSLQLGEKLVGQLKEIDNPMITEVRG----KGLFIGIELNE 343 (392)
T ss_dssp SSC-------CSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEE----ETTEEEEEESS
T ss_pred CcC-------CCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHhcCCCceEEEe----eeeEEEEEEcc
Confidence 221 1235677777777788875443 6778888999999999998721 33433221 12334444444
Q ss_pred CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1697 IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1697 ~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+..++...| +||.++++. .+++|++++..+|.+|+++++++|++.
T Consensus 344 -~~~~l~~~l~~~gi~v~~~~-----------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~ 390 (392)
T 3ruy_A 344 -PARPYCEQLKAAGLLCKETH-----------------------ENVIRIAPPLVISEEDLEWAFQKIKAV 390 (392)
T ss_dssp -CSHHHHHHHHTTTEECCCBT-----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHCCcEEecCC-----------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 566777666 799988653 178999999999999999999999863
No 403
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.81 E-value=2.2e-19 Score=235.90 Aligned_cols=312 Identities=14% Similarity=0.050 Sum_probs=212.3
Q ss_pred CCCCCHHHHHHHHHHHhh-ccCCCCCccchhHHHHHHHHHHHHHHHHHHh-CC-CCC---cEEEeCCHHHHHHHHHHhhh
Q psy15216 1402 TTPIDPRVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQLI-YA-DPR---EIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~-~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~-g~-~~~---~iv~t~gaT~al~~al~~l~ 1475 (2602)
..+.++.+.+++.+.... ...++.. ....++|+++++++ +. .++ +|++|+|+++|++.++.++.
T Consensus 53 ~~~~~~~v~~a~~~~~~~~~~~Y~~~----------~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~ 122 (413)
T 3t18_A 53 KIIALPSVYDRLDEMDRSHIASYAPI----------EGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYL 122 (413)
T ss_dssp CBCCCHHHHHHHHHSCHHHHHSCCCT----------TCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHC
T ss_pred CcCChHHHHHHHHhcCcccccCcCCC----------CCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHhc
Confidence 456777888887764332 2223221 01356777777765 32 244 89999999999999999887
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEecc-CCCCCcChhHHHhhccC----Cce-EEEEecc-ccccccc
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP-KNNGLITLSQLEEKICS----DTI-LVSVMLV-NNEIGVI 1548 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~-~~~~~id~d~l~~~i~~----~t~-lv~l~~~-~n~tG~~ 1548 (2602)
++||+|+++.|.|+++...+... |++++.++. +.++.+|+++|++++++ +++ ++++++| +||||.+
T Consensus 123 ----~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~ 195 (413)
T 3t18_A 123 ----DEGDPLICHDYYWAPYRKICEEF---GRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYS 195 (413)
T ss_dssp ----CSSCEEEEESSCCTHHHHHHHHH---TCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCC
T ss_pred ----CCCCEEEECCCCcccHHHHHHHh---CCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCC
Confidence 89999999999999998877776 999999998 44568999999999985 777 8888999 9999999
Q ss_pred cChHHHH---HHhh------hcCCEEEEecccccCcc------cc--cCCCCCcc---EEEEccccccCCCc--eEEEEE
Q psy15216 1549 QPILEIG---ELCR------SKGVIFHCDAAQAVGKI------DI--NIQNYKVD---LMSFSAHKIYGPKG--IGALYI 1606 (2602)
Q Consensus 1549 ~~l~~I~---~ia~------~~gi~vivD~a~~~g~~------~~--~l~~~~~D---~~v~S~~K~~gp~G--~G~l~~ 1606 (2602)
+|.+++. ++|+ +||+++|+|++|..... ++ .....+.+ +++.|+||.+|++| +||+++
T Consensus 196 ~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~ 275 (413)
T 3t18_A 196 LSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVG 275 (413)
T ss_dssp CCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEE
Confidence 9966554 5555 89999999999742110 10 11122223 77789999888878 899998
Q ss_pred ---ecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEE
Q psy15216 1607 ---RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA-----RIEMKEELKRILFLQKRLYNGLMESIEEIYI 1678 (2602)
Q Consensus 1607 ---~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~-----~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i 1678 (2602)
++++++.+....... ......+++...+.++..+++.. ....+..++++.++++++.+.|.+ . ++.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~-g~~~ 350 (413)
T 3t18_A 276 ISSSKEIIEEFEASLAHS---ARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKE-N-KLTM 350 (413)
T ss_dssp EESCHHHHHHHHHHHHHH---HHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCC
T ss_pred ecCCHHHHHHHHHHHHHh---hhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCCc
Confidence 666666554321100 00001235566666665665422 234566778889999999999987 3 6655
Q ss_pred eCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHH
Q psy15216 1679 NGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEID 1756 (2602)
Q Consensus 1679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid 1756 (2602)
..+... .+++++..+..++...| +||.+++|. +++||+++..++.+.++
T Consensus 351 ~~~~~~-----~~~~~~~~~~~~~~~~l~~~gv~v~~g~------------------------~~iRis~~~~~~~~~l~ 401 (413)
T 3t18_A 351 IPYFGG-----FFTFIPTDKAFDIVKDLEKENIFTIPSA------------------------KGIRVAICGVGEEKIPK 401 (413)
T ss_dssp BCCCSS-----SCEEEECSCHHHHHHHHHHTTEECEECS------------------------SEEEECTTTSCGGGHHH
T ss_pred cCCCce-----EEEEeCCCCHHHHHHHHHhCCEEEecCC------------------------CceEEEEeeCCHHHHHH
Confidence 533222 11233334566666666 899998761 68999998666555555
Q ss_pred HHHHHHHH
Q psy15216 1757 FTIKLLKM 1764 (2602)
Q Consensus 1757 ~li~~L~~ 1764 (2602)
++.+++++
T Consensus 402 ~l~~~l~~ 409 (413)
T 3t18_A 402 LVQRLAFY 409 (413)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555543
No 404
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.81 E-value=2.3e-19 Score=234.57 Aligned_cols=341 Identities=12% Similarity=0.084 Sum_probs=224.4
Q ss_pred cccHHHHHHHHHhcC-CCccccceeeeeceeeecc-CCCCCCCHHHHHHHHH-HHhhc--cCCCCCccchhHHHHHHHHH
Q psy15216 1366 PSKFIEIKNSLEMTG-FKAESSGIVMRPYTNIVFK-DATTPIDPRVVDKMIP-YLRVQ--FGNPASRNHIYGWTAEKAIE 1440 (2602)
Q Consensus 1366 ~~~~~~v~~aL~~~g-~~~~~~ei~~iP~~~v~L~-~~~~~~~~~v~eal~~-~l~~~--~~np~~~~~~~~~~~~~~~~ 1440 (2602)
++.+..+.+.+++.. -.+.+..+++ |++ +...+.++.+.+++.+ .++.. ..++.. ....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~i~l~~g~------y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~----------~g~~ 73 (397)
T 3fsl_A 10 GDPILTLMERFKEDPRSDKVNLSIGL------YYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPM----------EGLN 73 (397)
T ss_dssp CCHHHHHHHHHHTCCCSCCEECSSCC------CCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCT----------TCCH
T ss_pred CCchhhHHHHHhcCCCCCeEEEeeeE------EECCCCCccCcHHHHHHHHhhccCccccccCCCC----------CchH
Confidence 445566666665432 1222333321 222 2334566899999998 77642 122211 1246
Q ss_pred HHHHHHHHHhCC------CCC--cEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEe
Q psy15216 1441 KARNEVAQLIYA------DPR--EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYL 1512 (2602)
Q Consensus 1441 ~lr~~ia~~~g~------~~~--~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v 1512 (2602)
++|+.++++++. +++ +|++|+|+|+|++.++..+. .+++||+|+++.|.|+++...++.. |++++.+
T Consensus 74 ~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~--~~~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~ 148 (397)
T 3fsl_A 74 CYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLK--RYFPESGVWVSDPTWENHVAIFAGA---GFEVSTY 148 (397)
T ss_dssp HHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHH--HHCTTCCEEEESSCCHHHHHHHHHT---TCCEEEE
T ss_pred HHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHH--hcCCCCeEEEeCCCchhHHHHHHHc---CCceEEE
Confidence 788888888853 567 89999999999999954321 1379999999999999987666554 9999999
Q ss_pred cc--CCCCCcChhHHHhhcc---CCceEEEEeccccccccccC---hHHHHHHhhhcCCEEEEecccccCccc-----cc
Q psy15216 1513 KP--KNNGLITLSQLEEKIC---SDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKID-----IN 1579 (2602)
Q Consensus 1513 ~~--~~~~~id~d~l~~~i~---~~t~lv~l~~~~n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~~-----~~ 1579 (2602)
+. +.++.+|+++++++++ ++++++++++|+||||.+++ +++|+++|++||+++|+|++|+..... ..
T Consensus 149 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 228 (397)
T 3fsl_A 149 PWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYA 228 (397)
T ss_dssp CCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHH
T ss_pred eeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHH
Confidence 88 4567899999999998 67899999999999999988 558899999999999999998643321 11
Q ss_pred ---C-CCCCccEEEEccccccCCCc--eEEEEEecC---CCCccccccccCCccccCCCCCcchhHHHHHHHHHHH----
Q psy15216 1580 ---I-QNYKVDLMSFSAHKIYGPKG--IGALYIRRN---PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL---- 1646 (2602)
Q Consensus 1580 ---l-~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~---~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~---- 1646 (2602)
+ ...+..+++.|++|.+|++| +||+++... .+..+...... ..+....+++.....++..++..
T Consensus 229 ~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~l~ 305 (397)
T 3fsl_A 229 IRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKA---TVRRNYSSPPNFGAQVVAAVLNDEALK 305 (397)
T ss_dssp HHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHH---HHHTTTSSCCSHHHHHHHHHHTSHHHH
T ss_pred HHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHH---HHHhccCCCCHHHHHHHHHHhcCHHHH
Confidence 1 12345688889999999888 899987432 22212111000 00111234455555555555542
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhhcCC--cEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCC
Q psy15216 1647 --ARIEMKEELKRILFLQKRLYNGLMESIE--EIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSA 1720 (2602)
Q Consensus 1647 --~~~~~~~~~~~~~~l~~~l~~~L~~~~~--gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~ 1720 (2602)
....+++.++++.++++++.+.|.+..+ ++.+..+. ..++.+...+...+...+ +||.+++|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~gi~v~~g------ 373 (397)
T 3fsl_A 306 ASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQ------RGMFSYTGLSAAQVDRLREEFGVYLIAS------ 373 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHC------CSSEEECCCCHHHHHHHHHTTCEECCTT------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCC------ceEEEecCCCHHHHHHHHHhCCEEECCC------
Confidence 1345778889999999999999987322 34333221 112344444444444444 68888643
Q ss_pred CCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1721 SLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1721 ~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
+ |++++..+ .++|++++++|++
T Consensus 374 -------------------~--Ris~~~~~-~~~i~~~~~~l~~ 395 (397)
T 3fsl_A 374 -------------------G--RMCVAGLN-TANVQRVAKAFAA 395 (397)
T ss_dssp -------------------C--EEEGGGCC-TTTHHHHHHHHHH
T ss_pred -------------------C--eEEEEecC-HhhHHHHHHHHHh
Confidence 2 89987544 4779999999986
No 405
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.81 E-value=2.6e-19 Score=241.07 Aligned_cols=321 Identities=12% Similarity=0.079 Sum_probs=211.4
Q ss_pred CHHHHHHHHHHHhhc-cCCCCCccchhHHHHHHHHHHHHHHHHHHh----C--CC---CCcEEEeCCHHHHHHHHHHhhh
Q psy15216 1406 DPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--AD---PREIIWTSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1406 ~~~v~eal~~~l~~~-~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g--~~---~~~iv~t~gaT~al~~al~~l~ 1475 (2602)
++.+++++.+.+... +..|..| ..++|+.+++++ + .+ +++|++|+|+|+|++.++.++.
T Consensus 117 ~~~~v~a~~~~~~~~~y~~~~~g-----------~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~ 185 (533)
T 3f6t_A 117 RDKVVAEWVNGAVANNYPVPDRC-----------LVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLA 185 (533)
T ss_dssp HHHHHHHHHHHHHTCSCCSSSSC-----------CHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCCCCccc-----------HHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhh
Confidence 456666666655432 2222221 234555555554 2 21 3689999999999999999831
Q ss_pred hh-hccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccC----CCCCcChhHHHhhccCCceEEEEeccccccccccC
Q psy15216 1476 HF-YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK----NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP 1550 (2602)
Q Consensus 1476 ~~-~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~----~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~ 1550 (2602)
.. .+++||+|+++.|+|+++....... |+.++.++++ .++.+|+++|++++++++++|++++|+||||.++|
T Consensus 186 ~~~l~~~gd~Viv~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~ 262 (533)
T 3f6t_A 186 ENHLLKKGDKIAINEPIFTPYLRIPELK---DYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFD 262 (533)
T ss_dssp HTTSSCTTCEEEEESSCCHHHHTSGGGG---GSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCC
T ss_pred hhhccCCcCEEEEcCCCcHHHHHHHHHc---CCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccC
Confidence 10 1389999999999999987655544 8899999875 35779999999999999999999999999999999
Q ss_pred hH---HHHHHhh-hcCCEEEEecccccCcc-cccCC--CCCccEEEEccccccCCCc--eEEEEEecC-----CCCcccc
Q psy15216 1551 IL---EIGELCR-SKGVIFHCDAAQAVGKI-DINIQ--NYKVDLMSFSAHKIYGPKG--IGALYIRRN-----PRTRIEA 1616 (2602)
Q Consensus 1551 l~---~I~~ia~-~~gi~vivD~a~~~g~~-~~~l~--~~~~D~~v~S~~K~~gp~G--~G~l~~~~~-----~~~~l~~ 1616 (2602)
.+ +|+++|+ +||+++|+|++|+.... ...+. ..+.++++.|+||.+|++| +||++++++ +++.+.+
T Consensus 263 ~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~ 342 (533)
T 3f6t_A 263 TNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDK 342 (533)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCH
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhcch
Confidence 66 7888888 68999999999873221 11111 1135689999999999888 899999987 4333321
Q ss_pred c--------cc-----------------cCCccccCCCCCcchhHHHHHHH-HHHHH---------HHHHHHHHHHHHHH
Q psy15216 1617 Q--------IH-----------------GGGHEYGLRSGTLATHQIVGMGE-AFRLA---------RIEMKEELKRILFL 1661 (2602)
Q Consensus 1617 ~--------~~-----------------g~~~~~~~~~gt~~~~~~~al~~-aL~~~---------~~~~~~~~~~~~~l 1661 (2602)
. +. ...........+.+.+.+.++.. ++..+ ...+++.+++++++
T Consensus 343 ~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r 422 (533)
T 3f6t_A 343 VELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSER 422 (533)
T ss_dssp HHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHH
T ss_pred hhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHH
Confidence 0 00 00001112233455555554321 22222 24567788888999
Q ss_pred HHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-----------------CCcHHHHHhc---CCEEEccccccCCCC
Q psy15216 1662 QKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-----------------IEGESLLMAI---KDIAVSSGSACTSAS 1721 (2602)
Q Consensus 1662 ~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~L---~gI~v~~g~~~~~~~ 1721 (2602)
++++.+.|. + ++.+..+.. .....+.++. .+..+++..+ +||.+.+|..|..+
T Consensus 423 ~~~l~~~L~--~-~~~~~~~~~---g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~- 495 (533)
T 3f6t_A 423 YDQLHDAMQ--A-PKDETDTNT---HYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAK- 495 (533)
T ss_dssp HHHHHHHHT--C-CCCCSTTBC---CSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSS-
T ss_pred HHHHHHhcC--C-CccccCCCc---eEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCC-
Confidence 999999984 2 333221111 1112222221 1233444433 69999999988653
Q ss_pred CChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1722 LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1722 ~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.+++|||++. .+.+++++++++|++.
T Consensus 496 -----------------~~~iRls~a~-~~~e~i~~~i~~L~~~ 521 (533)
T 3f6t_A 496 -----------------PGELRVSQAN-LPTEDYALIGKQVLEL 521 (533)
T ss_dssp -----------------TTEEEEESSS-SCHHHHHHHHHHHHHH
T ss_pred -----------------CCEEEEEEee-CCHHHHHHHHHHHHHH
Confidence 3799999964 4789999999999973
No 406
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.81 E-value=5.5e-20 Score=195.58 Aligned_cols=121 Identities=45% Similarity=0.688 Sum_probs=111.5
Q ss_pred CceeeeccccccceEEeeccEEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCCC
Q psy15216 2402 DNFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMP 2481 (2602)
Q Consensus 2402 ~~~~~~d~~~~~~gi~~~~~~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~ 2481 (2602)
.++.+.|++|++||+++.++.|.++|+||++||+++++.|++..|||+.+.|.||||++..+.+|..||+|.|+++||.|
T Consensus 15 ~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~p 94 (135)
T 1q5l_A 15 RGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAP 94 (135)
T ss_dssp ------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSCC
T ss_pred CcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEEEEcCCccEEEEEEeecCCcEEEEEEecCCCC
Q psy15216 2482 AGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNM 2522 (2602)
Q Consensus 2482 ~g~~~i~v~f~id~~g~l~V~a~~~~tg~~~~~~i~~~~~l 2522 (2602)
+|+++|+|+|+||.||+|+|+|+++.||++.+++|+...+|
T Consensus 95 ~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~l 135 (135)
T 1q5l_A 95 RGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGL 135 (135)
T ss_dssp SSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSCCC
T ss_pred CceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecCCCC
Confidence 99999999999999999999999999999999999887554
No 407
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.81 E-value=3e-19 Score=230.35 Aligned_cols=302 Identities=13% Similarity=0.082 Sum_probs=204.7
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHhhhhhhcc
Q psy15216 1402 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKK 1480 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~-~~~iv~t~gaT~al~~al~~l~~~~~~ 1480 (2602)
+.+.++.+++++.. +++| ....+++++.+++++|++ ++++++++|+|+|++.++.++
T Consensus 39 ~~~~~~~v~~a~~~-----~~~~-----------~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~------ 96 (374)
T 2aeu_A 39 GFLIDEKDKALLNT-----YIGS-----------SYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL------ 96 (374)
T ss_dssp CCCCCHHHHHHHTS-----TTHH-----------HHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH------
T ss_pred CCCCCHHHHHHHHH-----hcCc-----------hHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC------
Confidence 45778888888851 1111 123466777888999983 468999999999999998864
Q ss_pred CCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceE-EEEeccccccc-cccChHHHHHHh
Q psy15216 1481 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTIL-VSVMLVNNEIG-VIQPILEIGELC 1558 (2602)
Q Consensus 1481 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~l-v~l~~~~n~tG-~~~~l~~I~~ia 1558 (2602)
+||+|++++++|+++...+..+...|++++.+ .|+++++++ +++|++ |++++|+|||| ...|+++|.++|
T Consensus 97 ~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~ 168 (374)
T 2aeu_A 97 KPKKVIHYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-IDKDTLVIITGSTMDLKVIELENFKKVINTA 168 (374)
T ss_dssp CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-CCTTEEEEEECBCTTSCBCCHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-CCCccEEEEEccCCCCCCCCcccHHHHHHHH
Confidence 79999999999988766555556669999888 389999999 889999 99999999999 888999999999
Q ss_pred hhcCCEEEEecccccCcc-cc-c--CCCCCccEEEEcccccc-CCCceEEEEEecCCCCccccccccCCccccCCCCCcc
Q psy15216 1559 RSKGVIFHCDAAQAVGKI-DI-N--IQNYKVDLMSFSAHKIY-GPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLA 1633 (2602)
Q Consensus 1559 ~~~gi~vivD~a~~~g~~-~~-~--l~~~~~D~~v~S~~K~~-gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~ 1633 (2602)
++||+++|+|++|+.+.. +. . ...+++|++++|+||.+ |+ ++||+++++++++.+..... ...++++
T Consensus 169 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~-~~G~~~~~~~~~~~l~~~~~-------~~~~~~~ 240 (374)
T 2aeu_A 169 KNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGP-RGGLLAGKKELVDKIYIEGT-------KFGLEAQ 240 (374)
T ss_dssp HHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSC-SCEEEEEEHHHHHHHHHHHH-------TTTCBCC
T ss_pred HHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCc-ceEEEEECHHHHHHHHHhhc-------cccCCCC
Confidence 999999999999876531 11 1 11246799999999954 55 57999999877766654321 1123556
Q ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHH----HHHHHHHHhhcC---CcEEEeCCCCCCCCceEEEEEecCCc-H----
Q psy15216 1634 THQIVGMGEAFRLARI-EMKEELKRILFL----QKRLYNGLMESI---EEIYINGDMNNRIPHNLNISFNFIEG-E---- 1700 (2602)
Q Consensus 1634 ~~~~~al~~aL~~~~~-~~~~~~~~~~~l----~~~l~~~L~~~~---~gl~i~~~~~~~~~~~~~~~~~~~~~-~---- 1700 (2602)
...+.++.++++.... .+....+..+.+ ++.+.+.|.. + +++.+..+ +....+.+..... .
T Consensus 241 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~g~~~~~~-----~~g~~~~~~~~~~~~~~~~ 314 (374)
T 2aeu_A 241 PPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKA-IDDNINIVYERT-----PTGFVIKRVYKDDTINIKK 314 (374)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTT-TCTTEEEEEEEC-----SSEEEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccCcceeeC-----CceEEEEeecccccccccc
Confidence 6667677677764321 233333333333 4555665544 3 35554322 2233333322211 1
Q ss_pred --HHHHh-c--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCC-CCCHHHHHHHHHHHHHh
Q psy15216 1701 --SLLMA-I--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR-FTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1701 --~~~~~-L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~-~~t~edid~li~~L~~~ 1765 (2602)
++... + +||.+++|..+... .+++||+++. ..+..+++++.++|++.
T Consensus 315 ~~~~~~~ll~~~gV~v~~g~~~~~~------------------~~~lRi~~~~~~~~~~~l~~l~~~l~~~ 367 (374)
T 2aeu_A 315 LIEIGFNLLKNYGIITITVAGMPGA------------------SKSLRIDLTSRDAERIDDNYIIKAIVES 367 (374)
T ss_dssp HHHHHHHHHHHHCEECSTTSSSCSS------------------CCSEEEETTSGGGGGSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCEEEecCCCCCCC------------------CCeEEEEcCCchHHHHHHHHHHHHHHHH
Confidence 13322 2 69999988654211 2689999874 22333588888888764
No 408
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.81 E-value=1.7e-19 Score=236.00 Aligned_cols=339 Identities=12% Similarity=0.071 Sum_probs=218.8
Q ss_pred cccHHHHHHHHHhcCCC-ccccceeeeeceeeeccC-CCCCCCHHHHHHHHHHHhh--ccCCCCCccchhHHHHHHHHHH
Q psy15216 1366 PSKFIEIKNSLEMTGFK-AESSGIVMRPYTNIVFKD-ATTPIDPRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIEK 1441 (2602)
Q Consensus 1366 ~~~~~~v~~aL~~~g~~-~~~~ei~~iP~~~v~L~~-~~~~~~~~v~eal~~~l~~--~~~np~~~~~~~~~~~~~~~~~ 1441 (2602)
|+.+..+.+.+...+-+ +.+..++ .|++. ...+..+.+.+++.+.... ...+++. . ...+
T Consensus 12 ~~~i~~~~~~~~~~~~~~~i~l~~g------~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~----~------g~~~ 75 (401)
T 7aat_A 12 PDPILGVTEAFKRDTNSKKMNLGVG------AYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPI----A------GLAD 75 (401)
T ss_dssp CCHHHHHHHHHHHCCCTTCEECCCC------SCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCT----T------CCHH
T ss_pred CChhHHHHHHHhhCCCCCceeeeee------eEECCCCCEechHHHHHHHHHhcccccccCCCCC----C------CCHH
Confidence 45566666666654322 2333332 12222 2234456788888877653 1222221 1 1467
Q ss_pred HHHHHHHHhCC------CCCcEEE--eCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEec
Q psy15216 1442 ARNEVAQLIYA------DPREIIW--TSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLK 1513 (2602)
Q Consensus 1442 lr~~ia~~~g~------~~~~iv~--t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~ 1513 (2602)
+|++++++++. ++++|++ |+|+|+|+++++.++. ...++||+|++++|+|+++...++.. |++++.++
T Consensus 76 lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~-~~~~~gd~Vlv~~p~~~~~~~~~~~~---g~~~~~~~ 151 (401)
T 7aat_A 76 FTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQ-RFFKFSRDVYLPKPSWGNHTPIFRDA---GLQLQAYR 151 (401)
T ss_dssp HHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHH-HHCTTCCEEEEEESCCTTHHHHHHHT---TCEEEEEE
T ss_pred HHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHH-HhccCCCEEEEcCCCchhHHHHHHHc---CCeeEeee
Confidence 88888888854 3789977 9999999999987764 22478999999999999988776655 99999998
Q ss_pred cC--CCCCcChhHHHhhc---cCCceEEEEeccccccccccC---hHHHHHHhhhcCCEEEEecccccCcc-cc-----c
Q psy15216 1514 PK--NNGLITLSQLEEKI---CSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI-DI-----N 1579 (2602)
Q Consensus 1514 ~~--~~~~id~d~l~~~i---~~~t~lv~l~~~~n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~-~~-----~ 1579 (2602)
.+ .++.+|++.+++.+ +++++++++++||||||.+++ +++|+++|++||+++++|++|..... .. .
T Consensus 152 ~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~ 231 (401)
T 7aat_A 152 YYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWA 231 (401)
T ss_dssp CEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHH
T ss_pred eeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHH
Confidence 75 36789999666665 468899999999999999888 77888999999999999999763221 11 1
Q ss_pred C----CCCCccEEEEccccccCCCc--eEEEEEec---C----CCCccccccccCCccccCCCCCcchhHHHHHHHHHHH
Q psy15216 1580 I----QNYKVDLMSFSAHKIYGPKG--IGALYIRR---N----PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL 1646 (2602)
Q Consensus 1580 l----~~~~~D~~v~S~~K~~gp~G--~G~l~~~~---~----~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~ 1646 (2602)
+ ......+++.|+||.+|++| +||+++.. + +...+..... ....+++...+.++..++..
T Consensus 232 ~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~ 304 (401)
T 7aat_A 232 LRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIR-------PMYSNPPMNGARIASLILNT 304 (401)
T ss_dssp HHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHH-------HHHSSCCHHHHHHHHHHHHC
T ss_pred HHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHH-------hccCCCChHHHHHHHHHhCC
Confidence 1 12234688899999999888 89999742 1 1111111110 00112333333333334431
Q ss_pred --H----HHHHHHHHHHHHHHHHHHHHHHhhcC--CcEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccc
Q psy15216 1647 --A----RIEMKEELKRILFLQKRLYNGLMESI--EEIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSA 1716 (2602)
Q Consensus 1647 --~----~~~~~~~~~~~~~l~~~l~~~L~~~~--~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~ 1716 (2602)
+ ...+++.+++++++++++.+.|.+.. +++.+..+ ...++.|...+.+.+...+ +||.+.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ll~~~gi~v~---- 374 (401)
T 7aat_A 305 PELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITD------QIGMFCFTGLKPEQVERLTKEFSIYMT---- 374 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHH------CCSSEEECCCCHHHHHHHHHHHCEECC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecC------CcceEEecCCCHHHHHHHHHhCCEecc----
Confidence 1 34467788899999999999998721 12332211 2223444444444443332 578764
Q ss_pred cCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1717 CTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1717 ~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
..+|+|++..++. +|++++++|++.
T Consensus 375 -----------------------~~~Ris~~~~~~~-~i~~~~~~l~~~ 399 (401)
T 7aat_A 375 -----------------------KDGRISVAGVASS-NVGYLAHAIHQV 399 (401)
T ss_dssp -----------------------TTCEEEGGGCCTT-THHHHHHHHHHH
T ss_pred -----------------------CCCeEEeccCChh-hHHHHHHHHHHH
Confidence 2379999876664 599999999863
No 409
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.81 E-value=2.5e-19 Score=237.24 Aligned_cols=317 Identities=15% Similarity=0.017 Sum_probs=212.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHh-hhcCCCCCCCcchhhhHHHHHHHHHHHHHHHh-CCC-----CCcEEE--eCCHHHHH
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLR-VQFGNPASRNHIYGWTAEKAIEKARNEVAQLI-YAD-----PREIIW--TSGATESN 71 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~-~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~-g~~-----~~~Iv~--t~g~T~al 71 (2602)
+|+.+.+++.+.+.+++.+... ....+... .. .....++|+.+++++ |.+ +++|++ |+|+|+|+
T Consensus 60 ~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y---~~----~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al 132 (448)
T 3meb_A 60 RDESGKPWILPAVKEAEAIISSDLSKYNKEY---PP----VAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSL 132 (448)
T ss_dssp CCTTSCCCCCHHHHHHHHHHHHCTTTTCCSC---CC----TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHH
T ss_pred cCCCCCEechHHHHHHHHHHhhcccCCCCCC---CC----CcchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHH
Confidence 4667777788888888766541 11111111 11 112467889999987 876 689999 99999999
Q ss_pred HHHH--HhcccccccCCCEEEEcCCCCcccHHHHH-HHHhCCcEEEEecc-CCC--CccChHHHHhhcc---CCceEEEE
Q psy15216 72 NLAI--KGAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDGFRVTYLKP-KNN--GLITLSQLEEKIC---SDTILVSV 142 (2602)
Q Consensus 72 ~~~~--~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~-~~~~~G~~v~~v~~-~~~--~~ld~e~l~~~i~---~~tklv~i 142 (2602)
++++ .++. .+||+|++++|+|+++...++ .++..|++++.++. +++ +.+|+++++++++ ++++++++
T Consensus 133 ~l~~~~~~~~----~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~ 208 (448)
T 3meb_A 133 HIGFEFLHLW----MPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFH 208 (448)
T ss_dssp HHHHHHHHHH----CTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHh----CCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEe
Confidence 8844 4444 799999999999999877766 11144999999998 554 7899999999997 46889999
Q ss_pred ecccCcccccccHH---HHHHHHHhcCCEEEEeccccccc-ccc-----cC----CCCCccEEEeccccccCCCC--cEE
Q psy15216 143 MLVNNEIGVIQPIL---EIGELCRSKGVIFHCDAAQAVGK-IDI-----NI----QNYKVDLMSFSAHKIYGPKG--IGA 207 (2602)
Q Consensus 143 ~~~~npTG~~~~l~---~I~~la~~~g~~livD~a~a~g~-~~~-----dl----~~~~~D~~~~S~~K~~Gp~G--~G~ 207 (2602)
++||||||.+++.+ +|+++|++||+++|+|++|.... .+. .+ ......+++.|+||.+|++| +||
T Consensus 209 ~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 288 (448)
T 3meb_A 209 ACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGC 288 (448)
T ss_dssp SSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEE
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCcccccee
Confidence 99999999999855 48999999999999999976322 111 01 11123477889999999888 899
Q ss_pred E--EE--------e-c----CCCCcccceecCCCccccccccCcchhHHHHHHHHHHHH---H---HhHHHHHHHHHHHH
Q psy15216 208 L--YI--------R-R----NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA---R---IEMKEELKRILFLQ 266 (2602)
Q Consensus 208 l--~~--------~-~----~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~---~---~~~~~~~~~~~~l~ 266 (2602)
+ ++ + + +++..+.... +....+++.+...++.++|... . ..+++.++++.+++
T Consensus 289 l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~-------~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r 361 (448)
T 3meb_A 289 LHVVHAGVEGSVEKNKALSAAMVSGMTLQI-------RKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMR 361 (448)
T ss_dssp EEEECCCCSSSHHHHHHHHHHHHHHHHHHH-------HTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeccccccccCCHHHHHHHHHHHHHHH-------hcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 8 55 3 3 2333332211 1122345556666665666521 1 33678888899999
Q ss_pred HHHHHHHhhc-cCc------eEEeCCCCCCCCceEEEEEcccChhHHHHHh---CCeEEcccccCCCCCCChHHHHHHcC
Q psy15216 267 KRLYNGLMES-IEE------IYINGDMNNRIPHNLNISFNFIEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALG 336 (2602)
Q Consensus 267 ~~l~~~L~~~-~~g------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g 336 (2602)
+++.+.|.+. .++ +....+ ....+.+...+. +++..+ +||.+.+|.
T Consensus 362 ~~l~~~L~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~-~~~~~ll~~~gV~v~~G~----------------- 417 (448)
T 3meb_A 362 SLLHASLAKRKTPGPGSKGTWDHILT------AIGMFTFTGLTP-EHVDYLKEKWSIYLVKAG----------------- 417 (448)
T ss_dssp HHHHHHHHHTTCCCSTTTCCCTHHHH------CCSSEEECCCCH-HHHHHHHHHHCEEECSGG-----------------
T ss_pred HHHHHHHHhhCCCCcCcccccceeCC------CceEEEecCCCH-HHHHHHHHhCCEEEeCCC-----------------
Confidence 9999999772 133 222211 122244444443 333333 589987553
Q ss_pred CCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 337 CNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 337 ~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.|||++.. +.+++++++++|++.
T Consensus 418 ---------gRis~a~~-~~~~i~~~~~~l~~~ 440 (448)
T 3meb_A 418 ---------GRMSMCGL-TESNCDYVAEAIHDA 440 (448)
T ss_dssp ---------GEEEGGGC-CTTTHHHHHHHHHHH
T ss_pred ---------cEEEEecC-CHHHHHHHHHHHHHH
Confidence 29999754 446699999999864
No 410
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.81 E-value=9.4e-20 Score=236.71 Aligned_cols=278 Identities=14% Similarity=0.114 Sum_probs=197.6
Q ss_pred HHHHHHHHHHhCC-----CC-CcEEEeCCHHHHHHHHHHhhhhhhccCCC----EEEEcCCCCcchHHHHHHHHhCCcEE
Q psy15216 1440 EKARNEVAQLIYA-----DP-REIIWTSGATESNNLAIKGAAHFYKKRGK----HIITVQTEHKSVLDSIRKLENDGFRV 1509 (2602)
Q Consensus 1440 ~~lr~~ia~~~g~-----~~-~~iv~t~gaT~al~~al~~l~~~~~~~gd----~Vlv~~~~~~s~~~~~~~~~~~G~~v 1509 (2602)
.++|++++++++. ++ ++|++|+|+++++++++.++. ++|| +|++++|+|+++...++.. |+++
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~----~~Gd~~~~~Vlv~~P~y~~~~~~~~~~---g~~~ 143 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALS----SLARSQPVSVVAAAPFYSTYVEETTYV---RSGM 143 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHH----HTSSSSSEEEEECSSCCTHHHHHHHTT---CBTT
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhc----CCCCCCcceEEEcCCCchhHHHHHHHc---CCeE
Confidence 6788899988862 34 589999999999999999987 7999 9999999999987766544 8888
Q ss_pred EEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCc-ccccCCCCCccEE
Q psy15216 1510 TYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGK-IDINIQNYKVDLM 1588 (2602)
Q Consensus 1510 ~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~-~~~~l~~~~~D~~ 1588 (2602)
+.++.+.++ ++ .+++++|++++|+||||.+++ +|++.++.+++++|+|++|+.+. .++.. ..+.+++
T Consensus 144 ~~~~~d~~~------l~---~~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~~~~l~~-~~~~~i~ 211 (391)
T 3bwn_A 144 YKWEGDAWG------FD---KKGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPHYTPITR-RQDHDIM 211 (391)
T ss_dssp EEEEEESTT------CC---CCSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTTTSCCCC-CBCCSEE
T ss_pred EEecCCHHH------cC---CCCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCCCCcccc-CCCCeEE
Confidence 888766432 11 367899999999999999997 45442222339999999998542 12222 3456899
Q ss_pred EEccccccCCCc--eEEEEE-ecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHH----------HHHHHHHH
Q psy15216 1589 SFSAHKIYGPKG--IGALYI-RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA----------RIEMKEEL 1655 (2602)
Q Consensus 1589 v~S~~K~~gp~G--~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~----------~~~~~~~~ 1655 (2602)
+.|+||.+|++| +||+++ ++++++.+..... ....+++.+.+.++..+|+.. ..++++.+
T Consensus 212 ~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~-------~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 284 (391)
T 3bwn_A 212 LFTFSKITGHAGSRIGWALVKDKEVAKKMVEYII-------VNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGR 284 (391)
T ss_dssp EEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHH-------HHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHH
T ss_pred EEechhhcCCCccceEEEEecCHHHHHHHHHHhc-------ccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHH
Confidence 999999999888 699998 6666555544321 112355666666676777743 34578889
Q ss_pred HHHHHHHHHHHHHHhhcCCcEEEeCCCCCC--------CCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChh
Q psy15216 1656 KRILFLQKRLYNGLMESIEEIYINGDMNNR--------IPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPS 1725 (2602)
Q Consensus 1656 ~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~ 1725 (2602)
++++++++++.+.|.+ .+++.+..+.... .+.+.++++...+...+...| +||.+++|..|+..
T Consensus 285 ~~~~~~~~~l~~~L~~-~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~----- 358 (391)
T 3bwn_A 285 EMMKNRWEKLREVVKE-SDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCGSD----- 358 (391)
T ss_dssp HHHHHHHHHHHHHHHT-CSSEECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECEEGGGGTCC-----
T ss_pred HHHHHHHHHHHHHHHh-CCCcccccCCccccccccccCCCcceEEEecCCcHHHHHHHHHHCCEEEccCCCCCCC-----
Confidence 9999999999999988 6777765432211 011112333322223333333 89999999987431
Q ss_pred HHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1726 YVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1726 ~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.+++|||++ ++.+++++++++|++
T Consensus 359 -------------~~~iRis~~--~~~e~i~~~~~~L~~ 382 (391)
T 3bwn_A 359 -------------KKHVRVSML--SREDVFNVFLERLAN 382 (391)
T ss_dssp -------------TTEEEEESC--SCHHHHHHHHHHHHS
T ss_pred -------------CCEEEEEec--CCHHHHHHHHHHHHH
Confidence 279999998 488999999999986
No 411
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.80 E-value=9.1e-20 Score=239.53 Aligned_cols=318 Identities=14% Similarity=0.066 Sum_probs=215.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHh-CC-----CCCcEEE--eCCHHHHHHH
Q psy15216 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI-YA-----DPREIIW--TSGATESNNL 73 (2602)
Q Consensus 2 d~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~-g~-----~~~~Iv~--t~g~T~al~~ 73 (2602)
|..+..++++.+.+++.+.+... ...+ .|. ......++|+++++++ +. ++++|++ |+|+++|+++
T Consensus 42 ~~~~~~~~~~~v~~a~~~~~~~~-~~~~--~y~----~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~ 114 (412)
T 1ajs_A 42 TDDCQPWVLPVVRKVEQRIANNS-SLNH--EYL----PILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRI 114 (412)
T ss_dssp CTTSCCCCCHHHHHHHHHHHTCT-TCCC--CCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHhhhCh-hhcc--CCC----CCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHH
Confidence 34444567789999998876321 0000 011 1123467889999988 53 6789999 9999999999
Q ss_pred HHHhcccccccCC-----CEEEEcCCCCcccHHHHHHHHhCCcE-EEEeccC--CCCccChHHHHhhccC---CceEEEE
Q psy15216 74 AIKGAAHFYKKRG-----KHIITVQTEHKSVLDSIRKLENDGFR-VTYLKPK--NNGLITLSQLEEKICS---DTILVSV 142 (2602)
Q Consensus 74 ~~~~l~~~~~~~g-----d~Vlv~~~~~~s~~~~~~~~~~~G~~-v~~v~~~--~~~~ld~e~l~~~i~~---~tklv~i 142 (2602)
++..+. .+.+| |+|+++.+.|+++...+... |++ ++.++.+ +++.+|++++++++++ +++++++
T Consensus 115 ~~~~~~--~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~ 189 (412)
T 1ajs_A 115 GAEFLA--RWYNGTNNKDTPVYVSSPTWENHNGVFTTA---GFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLH 189 (412)
T ss_dssp HHHHHH--HHSSSSSCCCSCEEEEESCCTHHHHHHHHT---TCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHH--HhCcCcCCCCCeEEEcCCCcHHHHHHHHHc---CCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEE
Confidence 965332 12689 99999999999987666554 888 9888873 5677999999999864 7889999
Q ss_pred ecccCccccccc---HHHHHHHHHhcCCEEEEecccccc-cc-------ccc-CC-CCCccEEEeccccccCCCC--cEE
Q psy15216 143 MLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVG-KI-------DIN-IQ-NYKVDLMSFSAHKIYGPKG--IGA 207 (2602)
Q Consensus 143 ~~~~npTG~~~~---l~~I~~la~~~g~~livD~a~a~g-~~-------~~d-l~-~~~~D~~~~S~~K~~Gp~G--~G~ 207 (2602)
++|+||||.++| +++|+++|++||+++|+|++|... .. ++. +. ..+..+++.|+||.+|++| +||
T Consensus 190 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~ 269 (412)
T 1ajs_A 190 ACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGN 269 (412)
T ss_dssp SSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEE
Confidence 999999999987 457899999999999999997532 21 111 11 1123488899999999988 799
Q ss_pred EEE---ecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHH------HHhHHHHHHHHHHHHHHHHHHHhhccC
Q psy15216 208 LYI---RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESIE 278 (2602)
Q Consensus 208 l~~---~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~------~~~~~~~~~~~~~l~~~l~~~L~~~~~ 278 (2602)
+++ ++++++.+...... ......++++.....++.++|+.. ..++++..++++++++++.+.|.+ +.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~ 345 (412)
T 1ajs_A 270 LTVVAKEPDSILRVLSQMQK---IVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEA-LK 345 (412)
T ss_dssp EEEECSSHHHHHHHHHHHHH---HHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred EEEecCCHHHHHHHHHHHHH---HHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hC
Confidence 999 66532222111100 001122345666777777788733 346788899999999999999987 32
Q ss_pred ---ceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCC
Q psy15216 279 ---EIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF 353 (2602)
Q Consensus 279 ---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~ 353 (2602)
++.+..+... .+.+...+...+...+ +||.+++ .+||+++.
T Consensus 346 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~gv~v~~---------------------------~~Ris~~~- 391 (412)
T 1ajs_A 346 TPGTWNHITDQIG------MFSFTGLNPKQVEYLINQKHIYLLP---------------------------SGRINMCG- 391 (412)
T ss_dssp CSSCCHHHHHCCS------SEEECCCCHHHHHHHHHTTCEECCT---------------------------TSEEEGGG-
T ss_pred CCCCeeEEcCCCc------eEEEeCCCHHHHHHHHHhCCEEecC---------------------------CcEEEeee-
Confidence 2444322111 1223333333333333 6887762 26999984
Q ss_pred CCHHHHHHHHHHHHhh
Q psy15216 354 TTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 354 ~t~edid~li~~L~~~ 369 (2602)
.+++++++++++|++.
T Consensus 392 ~~~~~i~~~~~~l~~~ 407 (412)
T 1ajs_A 392 LTTKNLDYVATSIHEA 407 (412)
T ss_dssp CCTTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4889999999999864
No 412
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.80 E-value=1.1e-19 Score=228.30 Aligned_cols=226 Identities=16% Similarity=0.127 Sum_probs=153.2
Q ss_pred eeCHHHHHHHHHHHHHHHHHHhhcCccceEEEEEcCC-CCHH--HH--HHHHH--------H----HHHcCCceEEEech
Q psy15216 739 IKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAY-FNDI--QR--QFTKN--------A----AKLAGLNVLRLLNE 801 (2602)
Q Consensus 739 ~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~-f~~~--qr--~~~~~--------A----a~~AGl~~~~li~E 801 (2602)
.+++..+++.+ +.|++ +.. .+.+ .++|+++|.. |... || +++++ + ++.++++.+.++.|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 56777777654 55543 211 1222 4699999987 6541 22 22221 1 34456788999999
Q ss_pred hHHHHHHhhhccCcccceEEEEEeCCceEEEEEEEEECCEEEEEEEecCCCCcchHHHHHHHHHHHHHHhhccCCHHHHH
Q psy15216 802 PTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVN 881 (2602)
Q Consensus 802 PtAAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~ 881 (2602)
|.||+++|... ...+..++|+|+||||+|+++++ ++.+.+.+..++.++||.+||+.|.+++.++ ... .+
T Consensus 149 ~~aa~~~~~~~-~~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-~~~-i~----- 218 (320)
T 2zgy_A 149 SIPAGYEVLQE-LDELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-RTK-GS----- 218 (320)
T ss_dssp SHHHHHHHHHH-SCTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-SBG-GG-----
T ss_pred cHHHHHhhhcc-ccCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-CCC-CC-----
Confidence 99999988643 23467899999999999999997 5556677778888999999999999988643 111 11
Q ss_pred HHHHHHHHH-HHHcccccceEEEEEecCCceEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCcc
Q psy15216 882 ILMIKSREI-KELLSYQSSVKLNVKLSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGST 960 (2602)
Q Consensus 882 ~l~~~~e~~-K~~LS~~~~~~~~i~~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~a~~~~~~i~~V~LvGG~s 960 (2602)
...+|++ |..- . .......++..-+++++.+++++.++++.+.|.+.+++. .+++.|+|+||+|
T Consensus 219 --~~~ae~~lk~~~-~--------~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~vvl~GGga 283 (320)
T 2zgy_A 219 --SYLADDIIIHRK-D--------NNYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHVMVIGGGA 283 (320)
T ss_dssp --HHHHHHHHHTTT-C--------HHHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEEEEESTTH
T ss_pred --HHHHHHHHHHhh-h--------hhcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeEEEECChH
Confidence 1234444 3320 0 000000000011456666777777777777777766552 5789999999999
Q ss_pred chHHHHHHHHhhccC---cccCcCCcchHhHHHHHHHh
Q psy15216 961 RMKHIHEGVSNFFKT---TLLTSIDPDKAVVFGAAIQA 995 (2602)
Q Consensus 961 r~P~v~~~l~~~f~~---~~~~~~~p~~aVa~GAa~~a 995 (2602)
++ +++.|++.|+. ++..+.||++|+|+||++++
T Consensus 284 ~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 284 EL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 98 99999999987 57788999999999999876
No 413
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.80 E-value=9e-19 Score=228.76 Aligned_cols=307 Identities=17% Similarity=0.174 Sum_probs=212.5
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccc--c
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--K 84 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~--~ 84 (2602)
++.++.+.+++.+.+... .+... .+ ..+..+++++++++++| ++++++++|+++|+.+++.++..... +
T Consensus 55 g~~~~~v~~a~~~~~~~~-~~~~~-~~-----~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~~al~~~~~~~~~~~ 125 (397)
T 2ord_A 55 GHSHPRLVEAIKDQAEKL-IHCSN-LF-----WNRPQMELAELLSKNTF--GGKVFFANTGTEANEAAIKIARKYGKKKS 125 (397)
T ss_dssp CBTCHHHHHHHHHHHHHC-SCCCT-TS-----EEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhc-ccCcc-cc-----CCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHHHHHHHHhhcCC
Confidence 346899999999988753 22211 11 12467889999999998 46899999999999999988751000 0
Q ss_pred C-CCEEEEcCCCCcccHH-HHHHHHhCCcE------------EEEeccCCCCccChHHHHhhccCCceEEEEecccCccc
Q psy15216 85 R-GKHIITVQTEHKSVLD-SIRKLENDGFR------------VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIG 150 (2602)
Q Consensus 85 ~-gd~Vlv~~~~~~s~~~-~~~~~~~~G~~------------v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG 150 (2602)
+ ++.|+++++.|++... ++... |.+ +..++. .|+++|++++++++++|++++++||||
T Consensus 126 ~~~~~vi~~~~~yh~~~~~~~~~~---g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~~~~nptG 197 (397)
T 2ord_A 126 EKKYRILSAHNSFHGRTLGSLTAT---GQPKYQKPFEPLVPGFEYFEF-----NNVEDLRRKMSEDVCAVFLEPIQGESG 197 (397)
T ss_dssp TTCCEEEEEBTCCCCSSHHHHHHS---BCHHHHGGGCSCCTTEEEECT-----TCHHHHHHHCCTTEEEEEECSEECTTT
T ss_pred CCCceEEEEcCCcCCCchhhhhcc---CChhhccccCCCCCCeeEecC-----CCHHHHHHHhhcCeEEEEEecccCCCC
Confidence 4 4788888888866433 44443 443 566654 289999999999999999999999999
Q ss_pred c-cc---cHHHHHHHHHhcCCEEEEecccc-cccc--cccCCCC--CccEEEeccccccCC-CCcEEEEEecCCCCcccc
Q psy15216 151 V-IQ---PILEIGELCRSKGVIFHCDAAQA-VGKI--DINIQNY--KVDLMSFSAHKIYGP-KGIGALYIRRNPRTRIEA 220 (2602)
Q Consensus 151 ~-~~---~l~~I~~la~~~g~~livD~a~a-~g~~--~~dl~~~--~~D~~~~S~~K~~Gp-~G~G~l~~~~~~~~~l~~ 220 (2602)
. ++ ++++|.++|++||+++|+|++|+ ++.. ++.+..+ .+|++ |++|.+|+ .++|+++++++++ .+.+
T Consensus 198 ~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~r~G~~~~~~~~~-~l~~ 274 (397)
T 2ord_A 198 IVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLGGGVPIGAVIVNERAN-VLEP 274 (397)
T ss_dssp CEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEEEEECSTTC-CCCT
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccCCCcCeEEEEEchHhc-ccCC
Confidence 9 44 58889999999999999999997 2211 1211212 36766 66897762 2389999998876 5543
Q ss_pred eecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc---cCceEEeCCCCCCCCceEEEE
Q psy15216 221 QIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNIS 297 (2602)
Q Consensus 221 ~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~g~~l~~~~~~~~~~~~~~~ 297 (2602)
... ....+.+....+++.++|+.... ++..++.+++++++.+.|.+. ++.+....+ ...++.+.
T Consensus 275 ~~~-------~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~g~~~~~~ 341 (397)
T 2ord_A 275 GDH-------GTTFGGNPLACRAGVTVIKELTK--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRG----MGLMIGIQ 341 (397)
T ss_dssp TSS-------CCSSTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE----ETTEEEEE
T ss_pred CCc-------CCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEE----EeEEEEEE
Confidence 211 11235566777777778875433 467778888888888888662 232221111 12344455
Q ss_pred Ecc-cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 298 FNF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 298 ~~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++. .+..++...| +||.++++. .+++|++++..++++|+++++++|++.
T Consensus 342 ~~~~~~~~~l~~~l~~~gi~v~~~~-----------------------~~~iRis~~~~~~~e~i~~~~~~l~~~ 393 (397)
T 2ord_A 342 FREEVSNREVATKCFENKLLVVPAG-----------------------NNTIRFLPPLTVEYGEIDLAVETLKKV 393 (397)
T ss_dssp ECTTSCHHHHHHHHHHTTEECEEET-----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ECChHHHHHHHHHHHHCCCEEccCC-----------------------CCEEEEECCcCCCHHHHHHHHHHHHHH
Confidence 553 3456676666 799888652 278999998889999999999999863
No 414
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.80 E-value=4.5e-19 Score=233.27 Aligned_cols=310 Identities=14% Similarity=0.089 Sum_probs=212.8
Q ss_pred CCCCCHHHHHHHHHHHhhc--cCCCCCccchhHHHHHHHHHHHHHHHHHHhCC------CCC--cEEEeCCHHHHHHHHH
Q psy15216 1402 TTPIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLIYA------DPR--EIIWTSGATESNNLAI 1471 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~~--~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~------~~~--~iv~t~gaT~al~~al 1471 (2602)
..+.++.+.+++.+.++.. ..++.. ....++|+.++++++. +++ +|++|+|+|+|++.++
T Consensus 65 ~~~~~~~v~~a~~~~~~~~~~~~Y~~~----------~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~ 134 (420)
T 4f4e_A 65 KIPLLRAVRDAEKARVEAGLPRGYLPI----------DGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGA 134 (420)
T ss_dssp CCCCCHHHHHHHHHHHHTCCCCCCCCT----------TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHH
T ss_pred CccCcHHHHHHHHHHhccCCCCCCCCC----------CCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHH
Confidence 4466689999999988752 112211 1246778888888743 466 8999999999999995
Q ss_pred H--hhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEecc--CCCCCcChhHHHhhcc---CCceEEEEeccccc
Q psy15216 1472 K--GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP--KNNGLITLSQLEEKIC---SDTILVSVMLVNNE 1544 (2602)
Q Consensus 1472 ~--~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~--~~~~~id~d~l~~~i~---~~t~lv~l~~~~n~ 1544 (2602)
. ++. ++||+|++++|.|+++...++.+ |++++.++. +.++.+|+++++++++ ++++++++++|+||
T Consensus 135 ~~~~~~----~~gd~Vlv~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NP 207 (420)
T 4f4e_A 135 DFLRTL----NPKAKVAISDPSWENHRALFDMA---GFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNP 207 (420)
T ss_dssp HHHHHH----CTTCCEEEEESCCHHHHHHHHHT---TCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred HHHHHh----CCCCEEEEeCCCcHhHHHHHHHc---CCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 4 444 79999999999999987766655 999999998 3467899999999998 78899999999999
Q ss_pred cccccC---hHHHHHHhhhcCCEEEEecccccCccc-----cc---C-CCCCccEEEEccccccCCCc--eEEEEEec--
Q psy15216 1545 IGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKID-----IN---I-QNYKVDLMSFSAHKIYGPKG--IGALYIRR-- 1608 (2602)
Q Consensus 1545 tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~~-----~~---l-~~~~~D~~v~S~~K~~gp~G--~G~l~~~~-- 1608 (2602)
||.+++ +++|+++|++||+++|+|++|+..... .. + ...+..+++.|+||.+|++| +||+++..
T Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~ 287 (420)
T 4f4e_A 208 TGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDS 287 (420)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCC
Confidence 999988 568888999999999999998543211 11 1 12345688899999999888 89987632
Q ss_pred -CCCCccccccccCCccccCCCCCcchhHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcC--CcEEEe
Q psy15216 1609 -NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL------ARIEMKEELKRILFLQKRLYNGLMESI--EEIYIN 1679 (2602)
Q Consensus 1609 -~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~------~~~~~~~~~~~~~~l~~~l~~~L~~~~--~gl~i~ 1679 (2602)
+.++.+...... ..+....+++.....++..++.. ....+++.+++++++++++.+.|.+.. +++.+.
T Consensus 288 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 364 (420)
T 4f4e_A 288 KDEAARVLSQLKR---VIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFI 364 (420)
T ss_dssp HHHHHHHHHHHHH---HHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHH
T ss_pred HHHHHHHHHHHHH---HHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeE
Confidence 222111111000 00011223445555555555552 134578888999999999999998732 244333
Q ss_pred CCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHH
Q psy15216 1680 GDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDF 1757 (2602)
Q Consensus 1680 ~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~ 1757 (2602)
.+. ...+.+...+...+...+ +||.+.++ .|+|++.. +.+++++
T Consensus 365 ~~~------~g~~~~~~~~~~~~~~~l~~~gI~v~~~---------------------------~Ris~~~~-~~~~i~~ 410 (420)
T 4f4e_A 365 NAQ------RGMFSYSGLTSAQVDRLREEFGIYAVST---------------------------GRICVAAL-NTRNLDV 410 (420)
T ss_dssp HHS------CSSEEECCCCHHHHHHHHHHHCEECCTT---------------------------SEEEGGGC-CTTTHHH
T ss_pred CCC------ccEEEEeCCCHHHHHHHHHhCCEEecCC---------------------------CeEEEecC-CHHHHHH
Confidence 221 122444444444444444 68887631 29998754 5577999
Q ss_pred HHHHHHHh
Q psy15216 1758 TIKLLKMK 1765 (2602)
Q Consensus 1758 li~~L~~~ 1765 (2602)
++++|++.
T Consensus 411 ~~~~l~~~ 418 (420)
T 4f4e_A 411 VANAIAAV 418 (420)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999863
No 415
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.80 E-value=1.1e-19 Score=237.29 Aligned_cols=311 Identities=13% Similarity=0.048 Sum_probs=214.1
Q ss_pred CCCCHHHHHHHHHHHhhc--cCCCCCccchhHHHHHHHHHHHHHHHHHHh-CC--CCCcEEE--eCCHHHHHHHHHHhhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLI-YA--DPREIIW--TSGATESNNLAIKGAA 1475 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~--~~np~~~~~~~~~~~~~~~~~lr~~ia~~~-g~--~~~~iv~--t~gaT~al~~al~~l~ 1475 (2602)
.+.++.+.+++.+.++.. .+++.. ....++|+++++++ +. ++++|++ |+|+++|+++++.++.
T Consensus 43 ~~~~~~v~~a~~~~~~~~~~~~y~~~----------~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~ 112 (394)
T 2ay1_A 43 TPIMRAVHAAEQRMLETETTKTYAGL----------SGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELAR 112 (394)
T ss_dssp CCCCHHHHHHHHHHHHHCCCCCCCCS----------SCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHhcCCcccCCCCCC----------CCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHH
Confidence 456788999998877541 122211 12467899999987 55 6788999 9999999999998875
Q ss_pred hhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccC--CCCCcChhHHHhhccC---CceEEEEeccccccccccC
Q psy15216 1476 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQP 1550 (2602)
Q Consensus 1476 ~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~id~d~l~~~i~~---~t~lv~l~~~~n~tG~~~~ 1550 (2602)
. +.+||+|+++.|+|+++...+... |++++.++.+ .++.+|++++++++++ +++++++++++||||.++|
T Consensus 113 ~--~~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~ 187 (394)
T 2ay1_A 113 M--ANPDLRVFVSDPTWPNHVSIMNFM---GLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLT 187 (394)
T ss_dssp H--HCTTCCEEEEESCCHHHHHHHHHH---TCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCC
T ss_pred h--cCCCCEEEEcCCCChhHHHHHHHc---CCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCC
Confidence 1 248999999999999988776665 8899999875 4677999999999975 3678888999999999998
Q ss_pred ---hHHHHHHhhhcCCEEEEecccccCcc-------ccc-CCCCC-ccEEEEccccccCCCc--eEEEEE---ecCCCCc
Q psy15216 1551 ---ILEIGELCRSKGVIFHCDAAQAVGKI-------DIN-IQNYK-VDLMSFSAHKIYGPKG--IGALYI---RRNPRTR 1613 (2602)
Q Consensus 1551 ---l~~I~~ia~~~gi~vivD~a~~~g~~-------~~~-l~~~~-~D~~v~S~~K~~gp~G--~G~l~~---~~~~~~~ 1613 (2602)
+++|.++|++||+++|+|++|+.... ++. +...+ ..+++.|+||.+|++| +||+++ ++++++.
T Consensus 188 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~ 267 (394)
T 2ay1_A 188 LDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATREL 267 (394)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHH
Confidence 55789999999999999999975322 121 22223 2467889999988888 699998 4433222
Q ss_pred cccccccCCccccCCCCCcchhHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhhcCC--cEEEeCCCCCC
Q psy15216 1614 IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESIE--EIYINGDMNNR 1685 (2602)
Q Consensus 1614 l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~------~~~~~~~~~~~~~l~~~l~~~L~~~~~--gl~i~~~~~~~ 1685 (2602)
+...... ......++++...+.++.++|+.. ..++++..++++++++++.+.|.+..+ ++.+..+.
T Consensus 268 l~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--- 341 (394)
T 2ay1_A 268 AQGAMAF---LNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEH--- 341 (394)
T ss_dssp HHHHHHH---HHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHC---
T ss_pred HHHHHHH---HHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCC---
Confidence 2211100 001112334555666666777632 345778888899999999999876211 23322111
Q ss_pred CCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 1686 IPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 1763 (2602)
Q Consensus 1686 ~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~ 1763 (2602)
...+.+...+...+...+ +||.+++ .+|++++ +++++++++++++|+
T Consensus 342 ---~g~~~~~~~~~~~~~~~l~~~gi~v~~---------------------------~~Ris~~-~~~~~~i~~~~~~l~ 390 (394)
T 2ay1_A 342 ---RGMFSRLGATPEQVKRIKEEFGIYMVG---------------------------DSRINIA-GLNDNTIPILARAII 390 (394)
T ss_dssp ---CSSEEECCCCHHHHHHHHHHHCEECCT---------------------------TCEEEGG-GCCTTTHHHHHHHHH
T ss_pred ---ceEEEeeCCCHHHHHHHHHhCCEEecC---------------------------CCeEEee-cCCHhhHHHHHHHHH
Confidence 111233333333443333 6888752 2699988 478999999999998
Q ss_pred Hh
Q psy15216 1764 MK 1765 (2602)
Q Consensus 1764 ~~ 1765 (2602)
+.
T Consensus 391 ~~ 392 (394)
T 2ay1_A 391 EV 392 (394)
T ss_dssp HH
T ss_pred Hc
Confidence 63
No 416
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.80 E-value=1.2e-18 Score=226.84 Aligned_cols=308 Identities=14% Similarity=0.132 Sum_probs=197.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHH-HHHhCCcEE
Q psy15216 1431 YGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDGFRV 1509 (2602)
Q Consensus 1431 ~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~-~~~~~G~~v 1509 (2602)
+++.......++++++++++|.+ ..++++|+++|+..++.++. ++||+|+++++.|+++...+. .+...|+++
T Consensus 76 y~r~~~p~~~~le~~lA~l~g~~--~~v~~~sG~~Ai~~al~al~----~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~ 149 (430)
T 3ri6_A 76 YSRSSNPTVEDLEQRLKNLTGAL--GVLALGSGMAAISTAILTLA----RAGDSVVTTDRLFGHTLSLFQKTLPSFGIEV 149 (430)
T ss_dssp ----CCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHC----CTTCEEEEETTCCHHHHHHHHTHHHHTTCEE
T ss_pred ccCCCCHHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEcCCCchhHHHHHHHHHHHcCCEE
Confidence 33333456789999999999975 46777788999999999886 899999999999999887665 455679999
Q ss_pred EEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEE
Q psy15216 1510 TYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMS 1589 (2602)
Q Consensus 1510 ~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v 1589 (2602)
++++.+ |+++|+++++++|++|++++|+||+|.+.|+++|.++|++||+++|+|++++.+.. .+...+++|+++
T Consensus 150 ~~v~~~-----d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~-~~~~~~g~div~ 223 (430)
T 3ri6_A 150 RFVDVM-----DSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL-LEAKRLGVDIEV 223 (430)
T ss_dssp EEECTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT-CCGGGGTCSEEE
T ss_pred EEeCCC-----CHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CChHHcCCEEEE
Confidence 999875 89999999999999999999999999999999999999999999999999998765 344456899999
Q ss_pred EccccccCCCc---eEEEEEecCC-CC---ccccc--cccCC--------ccccCCCCCcchhHHHHHHHHHHHHHHHHH
Q psy15216 1590 FSAHKIYGPKG---IGALYIRRNP-RT---RIEAQ--IHGGG--------HEYGLRSGTLATHQIVGMGEAFRLARIEMK 1652 (2602)
Q Consensus 1590 ~S~~K~~gp~G---~G~l~~~~~~-~~---~l~~~--~~g~~--------~~~~~~~gt~~~~~~~al~~aL~~~~~~~~ 1652 (2602)
.|++|++|++| .|+++.+.+. .. +...+ .+|.. .......++.+....+.+..+++ .+.
T Consensus 224 ~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~----~l~ 299 (430)
T 3ri6_A 224 LSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLE----TMA 299 (430)
T ss_dssp EECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHH----HHH
T ss_pred ECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh----hHH
Confidence 99999766543 3555544321 10 00000 00000 00000112222222221112222 245
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCcEE-EeCCCCCCCCc----------eE-EEEEecCC---cHHHHHhc--CCEEEcccc
Q psy15216 1653 EELKRILFLQKRLYNGLMESIEEIY-INGDMNNRIPH----------NL-NISFNFIE---GESLLMAI--KDIAVSSGS 1715 (2602)
Q Consensus 1653 ~~~~~~~~l~~~l~~~L~~~~~gl~-i~~~~~~~~~~----------~~-~~~~~~~~---~~~~~~~L--~gI~v~~g~ 1715 (2602)
...++..+++.++.+.|.+ .|++. +..|.-...|. +. .++|...+ ...++..| .++.++.|.
T Consensus 300 ~r~~~~~~na~~la~~L~~-~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~ 378 (430)
T 3ri6_A 300 LRIERSCQNAQELAHWLLS-IPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKEASYRFMDALKLIRRATNIHD 378 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHHCSSSEECSCCSC
T ss_pred HHHHHHHHHHHHHHHHHhC-CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHHHHHHHHHhCCcceecCCCCC
Confidence 5666778888889999987 67765 33222111111 22 44444322 34566666 456666666
Q ss_pred ccCCCCCChhHHH--------HHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 1716 ACTSASLEPSYVL--------RALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 1763 (2602)
Q Consensus 1716 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~ 1763 (2602)
.++.-..+..... ...|+. .+.||||++... ++.+++.|+
T Consensus 379 ~~sli~~p~~~~h~~~~~~~~~~~g~~----~~liRlsvG~E~----~~dl~~dl~ 426 (430)
T 3ri6_A 379 NKSLILSPYHVIYALNSHEERLKLEIS----PAMMRLSVGIEE----IEDLKEDIL 426 (430)
T ss_dssp SSCEEECTGGGC---------CGGGSC----TTEEEEECCSSC----HHHHHHHHH
T ss_pred CCceeeCCcccccccCCHHHHHhcCCC----CCeEEEEeccCC----HHHHHHHHH
Confidence 5542100011111 123333 489999999754 444444444
No 417
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.80 E-value=8.8e-19 Score=242.34 Aligned_cols=230 Identities=16% Similarity=0.100 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC
Q psy15216 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN 120 (2602)
Q Consensus 41 ~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~ 120 (2602)
..+.++++.+++++|.+ +.+++++|+++|+..++.++. ++||+|+++.++|+++...+... |+++++++++.
T Consensus 205 g~v~~~ee~la~l~G~d-~~i~~~~Gtt~a~~~~i~al~----~~GD~Vlv~~~~h~s~~~~~~~~---G~~~v~v~~~~ 276 (755)
T 2vyc_A 205 GAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACM----TDNDVVVVDRNCHKSIEQGLMLT---GAKPVYMVPSR 276 (755)
T ss_dssp HHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHC----CTTCEEEEESSCCHHHHHHHHHH---CCEEEEECCCB
T ss_pred cHHHHHHHHHHHHhCCC-ceEEECCcHHHHHHHHHHHhc----CCCCEEEECCCchHHHHHHHHHc---CCEEEEEeCCC
Confidence 35678899999999986 468889998999999999998 89999999999999998887765 99999998764
Q ss_pred C-----Ccc-----ChHHHHhhccC--Cce--------EEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccc
Q psy15216 121 N-----GLI-----TLSQLEEKICS--DTI--------LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI 180 (2602)
Q Consensus 121 ~-----~~l-----d~e~l~~~i~~--~tk--------lv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~ 180 (2602)
+ +.+ |+++|++++++ +++ +++++++ |++|.+.|+++|+++|++||+++++|+||+.+..
T Consensus 277 ~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~ 355 (755)
T 2vyc_A 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYAR 355 (755)
T ss_dssp CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGG
T ss_pred CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcc
Confidence 3 235 99999999963 454 9999998 7999999999999999999999999999975321
Q ss_pred --cc--cCCC-CC--ccE------EEecccc-ccCCCCcEEEEEecC--CCC--cccceecCCCccccccccCcchhHHH
Q psy15216 181 --DI--NIQN-YK--VDL------MSFSAHK-IYGPKGIGALYIRRN--PRT--RIEAQIHGGGHEYGLRSGTLATHQIV 242 (2602)
Q Consensus 181 --~~--dl~~-~~--~D~------~~~S~~K-~~Gp~G~G~l~~~~~--~~~--~l~~~~~g~~~~~~~~~gt~~~~~~~ 242 (2602)
+. +... .+ +|+ +++|+|| +.|+.|.|+++++++ .++ .+.... ..+..++|++..++
T Consensus 356 ~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~------~~~~s~sp~~~~ia 429 (755)
T 2vyc_A 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAY------MMHATTSPLYAICA 429 (755)
T ss_dssp GCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHH------HHTSCSSCCHHHHH
T ss_pred cCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHH------HHhCCCCHHHHHHH
Confidence 10 1111 34 465 8999999 556777899999876 222 111111 23456899999999
Q ss_pred HHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhhccCc---------eEEeCCC
Q psy15216 243 GMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEE---------IYINGDM 286 (2602)
Q Consensus 243 al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~g---------~~l~~~~ 286 (2602)
++.+|+++... +.++..++..+++++++++|.+ +++ ++++++.
T Consensus 430 al~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~-l~~~~~~~~~~~~~~~~~~ 482 (755)
T 2vyc_A 430 SNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMAR-LYKEFTADGSWFFKPWNKE 482 (755)
T ss_dssp HHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTTTCCCCEESSCS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-ccccccccccceeeccCch
Confidence 99999986543 3577888999999999999987 666 7777643
No 418
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.80 E-value=1.2e-18 Score=241.18 Aligned_cols=223 Identities=16% Similarity=0.101 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC
Q psy15216 1437 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN 1516 (2602)
Q Consensus 1437 ~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~ 1516 (2602)
..+.++++.+++++|++ +.+++++|+++|++.++.++. ++||+|+++.++|+++...+... |+++++++.+.
T Consensus 205 g~v~~~ee~la~l~G~d-~~i~~~~Gtt~a~~~~i~al~----~~GD~Vlv~~~~h~s~~~~~~~~---G~~~v~v~~~~ 276 (755)
T 2vyc_A 205 GAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACM----TDNDVVVVDRNCHKSIEQGLMLT---GAKPVYMVPSR 276 (755)
T ss_dssp HHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHC----CTTCEEEEESSCCHHHHHHHHHH---CCEEEEECCCB
T ss_pred cHHHHHHHHHHHHhCCC-ceEEECCcHHHHHHHHHHHhc----CCCCEEEECCCchHHHHHHHHHc---CCEEEEEeCCC
Confidence 35678899999999986 457788888899999999987 89999999999999998887665 99999998764
Q ss_pred C-----CCc-----ChhHHHhhccC--Cce--------EEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcc
Q psy15216 1517 N-----GLI-----TLSQLEEKICS--DTI--------LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI 1576 (2602)
Q Consensus 1517 ~-----~~i-----d~d~l~~~i~~--~t~--------lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~ 1576 (2602)
+ +.+ |+++|+++|++ +++ +++++++ |++|.+.|+++|+++|++||+++++|+||+.+..
T Consensus 277 ~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~ 355 (755)
T 2vyc_A 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYAR 355 (755)
T ss_dssp CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGG
T ss_pred CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcc
Confidence 3 235 99999999964 454 8999997 7999999999999999999999999999975321
Q ss_pred --cc--cCCC-CC--ccE------EEEcccc-ccCCCceEEEEEecC--CCCc--cccccccCCccccCCCCCcchhHHH
Q psy15216 1577 --DI--NIQN-YK--VDL------MSFSAHK-IYGPKGIGALYIRRN--PRTR--IEAQIHGGGHEYGLRSGTLATHQIV 1638 (2602)
Q Consensus 1577 --~~--~l~~-~~--~D~------~v~S~~K-~~gp~G~G~l~~~~~--~~~~--l~~~~~g~~~~~~~~~gt~~~~~~~ 1638 (2602)
+. +... .+ +|+ +++|+|| +.||+|.|+++++++ .+.. +... ...+.++++++..++
T Consensus 356 ~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~------~~~~~s~sp~~~~ia 429 (755)
T 2vyc_A 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQA------YMMHATTSPLYAICA 429 (755)
T ss_dssp GCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHH------HHHTSCSSCCHHHHH
T ss_pred cCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHH------HHHhCCCCHHHHHHH
Confidence 10 1111 34 565 8999999 567887899999876 3321 1111 123556889999999
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCc
Q psy15216 1639 GMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEE 1675 (2602)
Q Consensus 1639 al~~aL~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~g 1675 (2602)
++.+|++++.. +.++..++..+++++++++|.+ +++
T Consensus 430 al~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~-l~~ 466 (755)
T 2vyc_A 430 SNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMAR-LYK 466 (755)
T ss_dssp HHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-ccc
Confidence 99999986543 2567888889999999999987 566
No 419
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.80 E-value=7.9e-19 Score=230.16 Aligned_cols=310 Identities=14% Similarity=0.138 Sum_probs=215.0
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccccc---ccC
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY---KKR 85 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~---~~~ 85 (2602)
.++.+.+++.+.+.....++.. + ..+..+++++++++++|.+ ++++++|+++|+++++.++.... -++
T Consensus 56 ~~p~v~~a~~~~~~~~~~~~~~--~-----~~~~~~~l~~~la~~~~~~--~v~~~~gg~~a~~~al~~~~~~~~~~~~~ 126 (406)
T 4adb_A 56 AHPELREALNEQASKFWHTGNG--Y-----TNEPVLRLAKKLIDATFAD--RVFFCNSGAEANEAALKLARKFAHDRYGS 126 (406)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTT--S-----CCHHHHHHHHHHHHHSSCS--EEEEESSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCHHHHHHHHHHHHhcccccCC--c-----CCHHHHHHHHHHHhhCCCC--eEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 4889999999988753322211 1 1235788999999999864 99999999999999999876100 005
Q ss_pred C-CEEEEcCCCCcccHHHHHHHHhC----------CcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccc-
Q psy15216 86 G-KHIITVQTEHKSVLDSIRKLEND----------GFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQ- 153 (2602)
Q Consensus 86 g-d~Vlv~~~~~~s~~~~~~~~~~~----------G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~- 153 (2602)
| |.|++.++.|+++...+..+... +..+..++. .|+++|++++++++++|+++ |+||||.++
T Consensus 127 g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~-p~np~g~~~~ 200 (406)
T 4adb_A 127 HKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALIDDSTCAVIVE-PIQGEGGVVP 200 (406)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCSTTEEEEEEC-SEETTTTSEE
T ss_pred CCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhcCCeEEEEEe-CCcCCCCCcc
Confidence 5 99999999999986665554110 023333332 48999999999999999999 899999776
Q ss_pred ----cHHHHHHHHHhcCCEEEEecccc-cccc--c--ccCCCCCccEEEeccccccCCCC--cEEEEEecCCCCccccee
Q psy15216 154 ----PILEIGELCRSKGVIFHCDAAQA-VGKI--D--INIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQI 222 (2602)
Q Consensus 154 ----~l~~I~~la~~~g~~livD~a~a-~g~~--~--~dl~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~~~~ 222 (2602)
++++|.++|++||+++|+|++|+ ++.. + ++.....+|++ ++||.+| +| +|++++++++++.+.+..
T Consensus 201 ~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G~r~G~~~~~~~~~~~~~~~~ 277 (406)
T 4adb_A 201 ASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG-GGFPVGALLATEECARVMTVGT 277 (406)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TTSCCEEEEECHHHHHTCCTTS
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc-CCCCeEEEEEcHHHHhhhccCC
Confidence 48899999999999999999996 3211 1 12223346777 5699777 45 899999988776665443
Q ss_pred cCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEccc-
Q psy15216 223 HGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI- 301 (2602)
Q Consensus 223 ~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~- 301 (2602)
.+ ...+.+.....++.++++.... ++..++.+++++++.+.|.+....+....... ..+.++.+.++..
T Consensus 278 ~~-------~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~~ 347 (406)
T 4adb_A 278 HG-------TTYGGNPLASAVAGKVLELINT--PEMLNGVKQRHDWFVERLNTINHRYGLFSEVR-GLGLLIGCVLNADY 347 (406)
T ss_dssp SC-------CSSTTCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE-EETTEEEEEECTTT
T ss_pred cC-------CCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-EEEEEEEEEEeCCc
Confidence 21 1235666667767677774432 67778888888888888876211111110000 0123445555542
Q ss_pred --ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 302 --EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 302 --~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+..++...| +||.++++. .+++|++++..++++|+++++++|++.
T Consensus 348 ~~~~~~~~~~l~~~gi~v~~~~-----------------------~~~iRi~~~~~~~~e~i~~~~~~l~~~ 396 (406)
T 4adb_A 348 AGQAKQISQEAAKAGVMVLIAG-----------------------GNVVRFAPALNVSEEEVTTGLDRFAAA 396 (406)
T ss_dssp TTCHHHHHHHHHHTTEECEESS-----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCcEEeecC-----------------------CCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 456677766 799887542 278999998899999999999999964
No 420
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.80 E-value=3.2e-19 Score=235.49 Aligned_cols=332 Identities=18% Similarity=0.189 Sum_probs=210.3
Q ss_pred CCCCCHHHHHHHHHHHhhcc--CCCCCccchhHHHH-HHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1402 TTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTA-EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1402 ~~~~~~~v~eal~~~l~~~~--~np~~~~~~~~~~~-~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
....++.+.+++.+.+...+ ++|+...+. +... ....+..++.+++++|+++ ..++++|+++|+..++.++.
T Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~-~~v~~~~Gs~a~~~al~~~~--- 115 (425)
T 3ecd_A 41 ENIVSRAVLDAQGSVLTNKYAEGYPGKRYYG-GCEFADEVEALAIERVKRLFNAGH-ANVQPHSGAQANGAVMLALA--- 115 (425)
T ss_dssp CCCCCHHHHHHHTSGGGSSCTTC-------------CCHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHHC---
T ss_pred cCCCCHHHHHHHhhhhhcccccCCCcchhcC-CChHHHHHHHHHHHHHHHHhCCCC-ceeecCchHHHHHHHHHHcc---
Confidence 34558899999998885443 334331111 1111 1234445688899999764 23468899999999999886
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHHHhCC--cEEEEeccCC-CCCcChhHHHhhcc-CCceEEEEeccccccccccChHHH
Q psy15216 1479 KKRGKHIITVQTEHKSVLDSIRKLENDG--FRVTYLKPKN-NGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEI 1554 (2602)
Q Consensus 1479 ~~~gd~Vlv~~~~~~s~~~~~~~~~~~G--~~v~~v~~~~-~~~id~d~l~~~i~-~~t~lv~l~~~~n~tG~~~~l~~I 1554 (2602)
++||+|++++++|++...........| ..++.++.++ ++.+|+++|+++++ +++++|++++++| |...++++|
T Consensus 116 -~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--~~~~~l~~i 192 (425)
T 3ecd_A 116 -KPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAY--PRKLDFARF 192 (425)
T ss_dssp -CTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCC--CSCCCHHHH
T ss_pred -CCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccC--CCcCCHHHH
Confidence 899999999999998332222211223 4556666653 47799999999997 6899999998887 567889999
Q ss_pred HHHhhhcCCEEEEecccccCcccccC--CCC-CccEEEEccccc-cCCCceEEEEEec-CCCCccccccccCCccccCCC
Q psy15216 1555 GELCRSKGVIFHCDAAQAVGKIDINI--QNY-KVDLMSFSAHKI-YGPKGIGALYIRR-NPRTRIEAQIHGGGHEYGLRS 1629 (2602)
Q Consensus 1555 ~~ia~~~gi~vivD~a~~~g~~~~~l--~~~-~~D~~v~S~~K~-~gp~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~ 1629 (2602)
.++|++||+++|+|++|+.|....+. ... .+|++++|+||. .||+| |+++.++ ++.+.+.+....+ ..
T Consensus 193 ~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-g~~~~~~~~~~~~~~~~~~~~------~~ 265 (425)
T 3ecd_A 193 RAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRG-GFVLTNDEEIAKKINSAVFPG------LQ 265 (425)
T ss_dssp HHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHC----------
T ss_pred HHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCCc-EEEEeCCHHHHHHHHhhhCcc------cc
Confidence 99999999999999998765432111 001 268999999995 46775 9999884 3434443322211 12
Q ss_pred CCcchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--CCcHHHHHhc
Q psy15216 1630 GTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESLLMAI 1706 (2602)
Q Consensus 1630 gt~~~~~~~al~~aL~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~L 1706 (2602)
++++...+.++..++.. ...+++...++..++++++.+.|.+ .++.+..+... .....+.++. .+...+...|
T Consensus 266 ~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l 341 (425)
T 3ecd_A 266 GGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKA--GGVDLVTGGTD--NHLLLVDLRPKGLKGAQVEQAL 341 (425)
T ss_dssp -CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSCS--SSEEEEECGGGTCCHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh--CCCeeccCCCC--ceEEEEEeCCCCCCHHHHHHHH
Confidence 35666667777666653 3356788899999999999999987 57777643221 2333333332 2344555555
Q ss_pred --CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCC----CHHHHHHHHHHHHHh
Q psy15216 1707 --KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFT----TEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1707 --~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~----t~edid~li~~L~~~ 1765 (2602)
+||.++++..+... ......+.+|++++..+ +.+++++++++|++.
T Consensus 342 ~~~gi~v~~~~~p~~~-------------~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~ 393 (425)
T 3ecd_A 342 ERAGITCNKNGIPFDP-------------EKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEV 393 (425)
T ss_dssp HHTTEECEECCCTTCS-------------SCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHcCCEecccccCCCC-------------CCCCCccceeccchhheeccCCHHHHHHHHHHHHHH
Confidence 79999854422210 00011368999955444 499999999999874
No 421
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.80 E-value=5.1e-19 Score=234.23 Aligned_cols=344 Identities=14% Similarity=0.023 Sum_probs=224.0
Q ss_pred CcccHHHHHHHHHhcCCC-ccccceeeeeceeeecc-CCCCCCCHHHHHHHHHHHh-hccCCCCCccchhHHHHHHHHHH
Q psy15216 1365 SPSKFIEIKNSLEMTGFK-AESSGIVMRPYTNIVFK-DATTPIDPRVVDKMIPYLR-VQFGNPASRNHIYGWTAEKAIEK 1441 (2602)
Q Consensus 1365 ~~~~~~~v~~aL~~~g~~-~~~~ei~~iP~~~v~L~-~~~~~~~~~v~eal~~~l~-~~~~np~~~~~~~~~~~~~~~~~ 1441 (2602)
+|+.+..+.+++++.+-+ ..+..++ +|++ +...+..+.+.+++.+... ...++.... +. ....+
T Consensus 32 ~~~~i~~~~~~~~~~~~~~~i~l~~g------~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~-~~------~G~~~ 98 (448)
T 3meb_A 32 PPDAILNLTVLYNADTNPKKVNLGVG------AYRDESGKPWILPAVKEAEAIISSDLSKYNKEYP-PV------AGFPL 98 (448)
T ss_dssp CCCTTHHHHHHHHHCCCTTCEEESSC------CCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCC-CT------TCCHH
T ss_pred CCChHHHHHHHHHhCCCCCeEEeecc------cccCCCCCEechHHHHHHHHHHhhcccCCCCCCC-CC------cchHH
Confidence 344466677777766443 2333332 2233 2334566777777666551 111111110 11 12567
Q ss_pred HHHHHHHHh-CCC-----CCcEEE--eCCHHHHHHHHH--HhhhhhhccCCCEEEEcCCCCcchHHHHH-HHHhCCcEEE
Q psy15216 1442 ARNEVAQLI-YAD-----PREIIW--TSGATESNNLAI--KGAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDGFRVT 1510 (2602)
Q Consensus 1442 lr~~ia~~~-g~~-----~~~iv~--t~gaT~al~~al--~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~-~~~~~G~~v~ 1510 (2602)
+|+.+++++ |.+ +++|++ |+|+|+|+++++ .++. .+||+|++++|+|+++...++ .++..|++++
T Consensus 99 lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~----~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~ 174 (448)
T 3meb_A 99 FLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLW----MPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYK 174 (448)
T ss_dssp HHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHH----CTTCCEEEESSCCTHHHHHHHHHHCTTTSCCE
T ss_pred HHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHh----CCCCEEEECCCCCHhHHHHHHhhHHhCCCeEE
Confidence 899999987 876 689999 999999998843 4444 799999999999999877766 1113499999
Q ss_pred Eecc-CCC--CCcChhHHHhhcc---CCceEEEEeccccccccccC---hHHHHHHhhhcCCEEEEecccccC-cccc--
Q psy15216 1511 YLKP-KNN--GLITLSQLEEKIC---SDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVG-KIDI-- 1578 (2602)
Q Consensus 1511 ~v~~-~~~--~~id~d~l~~~i~---~~t~lv~l~~~~n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g-~~~~-- 1578 (2602)
.++. +++ +.+|+++++++++ ++++++++++|+||||.++| +++|+++|++||+++++|++|... ....
T Consensus 175 ~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~ 254 (448)
T 3meb_A 175 EYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEA 254 (448)
T ss_dssp EECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHH
T ss_pred EEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCccc
Confidence 9998 554 7899999999997 46889999999999999998 555999999999999999997632 2111
Q ss_pred ---cC----CCCCccEEEEccccccCCCc--eEEE--EE--------ec-----CCCCccccccccCCccccCCCCCcch
Q psy15216 1579 ---NI----QNYKVDLMSFSAHKIYGPKG--IGAL--YI--------RR-----NPRTRIEAQIHGGGHEYGLRSGTLAT 1634 (2602)
Q Consensus 1579 ---~l----~~~~~D~~v~S~~K~~gp~G--~G~l--~~--------~~-----~~~~~l~~~~~g~~~~~~~~~gt~~~ 1634 (2602)
.+ ......+++.|+||.+|++| +||+ ++ ++ +++..+.... +....+++.
T Consensus 255 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~-------~~~~~~~~~ 327 (448)
T 3meb_A 255 DAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQI-------RKTWSMSAI 327 (448)
T ss_dssp HTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHH-------HTTTSSCCH
T ss_pred CchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHH-------hcccCCccH
Confidence 01 11123477889999999888 8998 55 32 2222222211 122234555
Q ss_pred hHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhhc-CCc------EEEeCCCCCCCCceEEEEEecCCcHH
Q psy15216 1635 HQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMES-IEE------IYINGDMNNRIPHNLNISFNFIEGES 1701 (2602)
Q Consensus 1635 ~~~~al~~aL~~~------~~~~~~~~~~~~~l~~~l~~~L~~~-~~g------l~i~~~~~~~~~~~~~~~~~~~~~~~ 1701 (2602)
....++..+|... ...++..++++.++++++++.|.+. .++ +.... +...++.|...+.+.
T Consensus 328 ~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~ 401 (448)
T 3meb_A 328 HGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHIL------TAIGMFTFTGLTPEH 401 (448)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHH------HCCSSEEECCCCHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeC------CCceEEEecCCCHHH
Confidence 6666666666521 1346788889999999999999872 123 22111 222335555544433
Q ss_pred HHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1702 LLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1702 ~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+...+ +||.+.+|. .|||++.. +.++|++++++|++.
T Consensus 402 ~~~ll~~~gV~v~~G~--------------------------gRis~a~~-~~~~i~~~~~~l~~~ 440 (448)
T 3meb_A 402 VDYLKEKWSIYLVKAG--------------------------GRMSMCGL-TESNCDYVAEAIHDA 440 (448)
T ss_dssp HHHHHHHHCEEECSGG--------------------------GEEEGGGC-CTTTHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEeCCC--------------------------cEEEEecC-CHHHHHHHHHHHHHH
Confidence 32222 689987653 29998754 446699999999874
No 422
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.79 E-value=5.6e-19 Score=233.70 Aligned_cols=334 Identities=13% Similarity=0.163 Sum_probs=223.9
Q ss_pred CCCCCCCHHHHHHHHHHHhhhc--CCCCCCCcchhhhHHHHHHHHH-HHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKAR-NEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 4 a~~~~~p~~v~~a~~~~l~~~~--~~p~~~~~~~~~~~~~~~~~~r-~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
++..+.++.+++++.+.+...+ ++|.. .+..+.......+++. +++++++|++. ..++++|+++|+..++.++.
T Consensus 52 ~~~~~~~~~v~~a~~~~~~~~~~~g~~~~-~~~~g~~~~~~~e~~a~~~la~~~g~~~-~~v~~~sGs~a~~~a~~~~~- 128 (447)
T 3h7f_A 52 ASENFVPRAVLQAQGSVLTNKYAEGLPGR-RYYGGCEHVDVVENLARDRAKALFGAEF-ANVQPHSGAQANAAVLHALM- 128 (447)
T ss_dssp TTCCCCCHHHHHHHTSGGGGCCCCEETTE-ESSSCCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHHC-
T ss_pred cCCCCCCHHHHHHHHHHhcCCccccCCcc-cccCccHHHHHHHHHHHHHHHHHcCCCc-eEEEeCCHHHHHHHHHHHhc-
Confidence 3445779999999988875433 23332 1222333333445555 99999999874 23337888999999999887
Q ss_pred ccccCCCEEEEcCCCCcccHH-H--HHHHHhCCcEEEEeccC-CCCccChHHHHhhcc-CCceEEEEecccCcccccccH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLD-S--IRKLENDGFRVTYLKPK-NNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPI 155 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~-~--~~~~~~~G~~v~~v~~~-~~~~ld~e~l~~~i~-~~tklv~i~~~~npTG~~~~l 155 (2602)
++||+|++++++|+++.. . .... ..+..++.++++ .++.+|+++|++++. .+++++++++++||++. ++
T Consensus 129 ---~~Gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~l 202 (447)
T 3h7f_A 129 ---SPGERLLGLDLANGGHLTHGMRLNFS-GKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL--DF 202 (447)
T ss_dssp ---CTTCEEEEECGGGTCCGGGTCTTSHH-HHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC--CH
T ss_pred ---CCCCEEEecCcccccccchhhhhhhc-CCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc--CH
Confidence 899999999999988321 1 1111 125667777766 457899999999995 57899999999998887 99
Q ss_pred HHHHHHHHhcCCEEEEecccccccc----cccCCCCCccEEEecccccc-CCCCcEEEEEecCCCCcccceecCCCcccc
Q psy15216 156 LEIGELCRSKGVIFHCDAAQAVGKI----DINIQNYKVDLMSFSAHKIY-GPKGIGALYIRRNPRTRIEAQIHGGGHEYG 230 (2602)
Q Consensus 156 ~~I~~la~~~g~~livD~a~a~g~~----~~dl~~~~~D~~~~S~~K~~-Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~ 230 (2602)
++|.++|++||+++|+|++|+.|.. ..+.. .++|++++|+||.+ ||.| |+++.++++.+.+.+...+
T Consensus 203 ~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~G~~g-G~i~~~~~~~~~l~~~~~~------ 274 (447)
T 3h7f_A 203 AAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLGGGRS-GLIVGKQQYAKAINSAVFP------ 274 (447)
T ss_dssp HHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGCCCSC-EEEEECGGGHHHHHHHHTT------
T ss_pred HHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCCCCCe-EEEEECHHHHHHHhhhcCC------
Confidence 9999999999999999999876532 11111 24689999999954 5886 9999998776666543321
Q ss_pred ccccCcchhHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhc---cCceEEeCCCCCCCCceEEEEEcc--cChh
Q psy15216 231 LRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNISFNF--IEGE 304 (2602)
Q Consensus 231 ~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~---~~g~~l~~~~~~~~~~~~~~~~~~--~~~~ 304 (2602)
+..++++...+.++.+++... ..++++..++..++++++.+.|.+. .+|+.++.+... .+...+.+.. .+..
T Consensus 275 ~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~ 352 (447)
T 3h7f_A 275 GQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTD--VHLVLVDLRDSPLDGQ 352 (447)
T ss_dssp TTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCS--SSEEEEECTTSSCCHH
T ss_pred cccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCC--CCEEEEEcCCCCCCHH
Confidence 134566666677776777643 3356788889999999999999761 147777643221 2333444432 2344
Q ss_pred HHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCC----CCHHHHHHHHHHHHhh
Q psy15216 305 SLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 305 ~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~----~t~edid~li~~L~~~ 369 (2602)
.+...| +||.++....... ..+....+++|+++... .+++|+++++++|++.
T Consensus 353 ~~~~~l~~~GI~v~~~~i~~~-------------~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~ 410 (447)
T 3h7f_A 353 AAEDLLHEVGITVNRNAVPND-------------PRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATA 410 (447)
T ss_dssp HHHHHHHHTTEECBC--------------------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEecccCCCC-------------CCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHH
Confidence 444444 5999873211100 00001236799987543 4789999999999874
No 423
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.79 E-value=4.1e-19 Score=234.42 Aligned_cols=334 Identities=17% Similarity=0.169 Sum_probs=213.0
Q ss_pred CCCCCCCHHHHHHHHHHHhhhc--CCCCCCCcchhhhH-HHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTA-EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 4 a~~~~~p~~v~~a~~~~l~~~~--~~p~~~~~~~~~~~-~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
++..+.++.+.+++.+.+...+ ++++. .+..+... ....+.+++++++++|+++ ..++++|+++|+..++.++.
T Consensus 39 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~v~~~~Gs~a~~~al~~~~- 115 (425)
T 3ecd_A 39 ASENIVSRAVLDAQGSVLTNKYAEGYPGK-RYYGGCEFADEVEALAIERVKRLFNAGH-ANVQPHSGAQANGAVMLALA- 115 (425)
T ss_dssp TTCCCCCHHHHHHHTSGGGSSCTTC-------------CCHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHHC-
T ss_pred cccCCCCHHHHHHHhhhhhcccccCCCcc-hhcCCChHHHHHHHHHHHHHHHHhCCCC-ceeecCchHHHHHHHHHHcc-
Confidence 3445679999999998875433 23322 11111111 1234445688999999864 23568899999999999887
Q ss_pred ccccCCCEEEEcCCCCcccHHHHHHH--HhCCcEEEEeccCC-CCccChHHHHhhcc-CCceEEEEecccCcccccccHH
Q psy15216 81 FYKKRGKHIITVQTEHKSVLDSIRKL--ENDGFRVTYLKPKN-NGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPIL 156 (2602)
Q Consensus 81 ~~~~~gd~Vlv~~~~~~s~~~~~~~~--~~~G~~v~~v~~~~-~~~ld~e~l~~~i~-~~tklv~i~~~~npTG~~~~l~ 156 (2602)
++||+|+++.++|++........ ...+..++.++.++ ++.+|+++|+++++ +++++|++++++| |...+++
T Consensus 116 ---~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--~~~~~l~ 190 (425)
T 3ecd_A 116 ---KPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAY--PRKLDFA 190 (425)
T ss_dssp ---CTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCC--CSCCCHH
T ss_pred ---CCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccC--CCcCCHH
Confidence 89999999999999833222221 12234666676653 47899999999997 6899999998888 5678999
Q ss_pred HHHHHHHhcCCEEEEecccccccccccC--CC-CCccEEEecccccc-CCCCcEEEEEec-CCCCcccceecCCCccccc
Q psy15216 157 EIGELCRSKGVIFHCDAAQAVGKIDINI--QN-YKVDLMSFSAHKIY-GPKGIGALYIRR-NPRTRIEAQIHGGGHEYGL 231 (2602)
Q Consensus 157 ~I~~la~~~g~~livD~a~a~g~~~~dl--~~-~~~D~~~~S~~K~~-Gp~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~ 231 (2602)
+|.++|++||+++|+|++|+.|...... .. ..+|++++|+||.+ ||. .|+++.++ .+.+.+.+....+
T Consensus 191 ~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~~~~~~~~~~~------ 263 (425)
T 3ecd_A 191 RFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIAKKINSAVFPG------ 263 (425)
T ss_dssp HHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCS-CEEEEESCHHHHHHHHHHHC--------
T ss_pred HHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCC-cEEEEeCCHHHHHHHHhhhCcc------
Confidence 9999999999999999998765432110 00 12689999999965 666 49999884 4444444332111
Q ss_pred cccCcchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc--cChhHHHH
Q psy15216 232 RSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESLLM 308 (2602)
Q Consensus 232 ~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~ 308 (2602)
..++++...+.++.+++.. ...++++..++..++++++.+.|.+ .++.+..+... ...+.+.++. .+...+..
T Consensus 264 ~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 339 (425)
T 3ecd_A 264 LQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKA--GGVDLVTGGTD--NHLLLVDLRPKGLKGAQVEQ 339 (425)
T ss_dssp ---CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSCS--SSEEEEECGGGTCCHHHHHH
T ss_pred ccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh--CCCeeccCCCC--ceEEEEEeCCCCCCHHHHHH
Confidence 1235666666666666653 3356788899999999999999987 57887754321 2344444442 34455555
Q ss_pred Hh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCC----CHHHHHHHHHHHHhh
Q psy15216 309 AI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFT----TEKEIDFTIKLLKMK 369 (2602)
Q Consensus 309 ~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~----t~edid~li~~L~~~ 369 (2602)
.| +||.++++...... ......+.+|++++.++ +++++++++++|++.
T Consensus 340 ~l~~~gi~v~~~~~p~~~-------------~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~ 393 (425)
T 3ecd_A 340 ALERAGITCNKNGIPFDP-------------EKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEV 393 (425)
T ss_dssp HHHHTTEECEECCCTTCS-------------SCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCEecccccCCCC-------------CCCCCccceeccchhheeccCCHHHHHHHHHHHHHH
Confidence 55 69999854321100 00012368999955444 499999999999874
No 424
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.79 E-value=5.2e-19 Score=234.03 Aligned_cols=332 Identities=13% Similarity=0.164 Sum_probs=221.9
Q ss_pred CCCCHHHHHHHHHHHhhcc--CCCCCccchhHHHHHHHHHHHH-HHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhc
Q psy15216 1403 TPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKAR-NEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK 1479 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~--~np~~~~~~~~~~~~~~~~~lr-~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~ 1479 (2602)
.+.++.+++++.+.+.+.+ ++|++..+ .+.......+++. +++++++|++. ..++++|+++|+..++.++.
T Consensus 55 ~~~~~~v~~a~~~~~~~~~~~g~~~~~~~-~g~~~~~~~e~~a~~~la~~~g~~~-~~v~~~sGs~a~~~a~~~~~---- 128 (447)
T 3h7f_A 55 NFVPRAVLQAQGSVLTNKYAEGLPGRRYY-GGCEHVDVVENLARDRAKALFGAEF-ANVQPHSGAQANAAVLHALM---- 128 (447)
T ss_dssp CCCCHHHHHHHTSGGGGCCCCEETTEESS-SCCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHHC----
T ss_pred CCCCHHHHHHHHHHhcCCccccCCccccc-CccHHHHHHHHHHHHHHHHHcCCCc-eEEEeCCHHHHHHHHHHHhc----
Confidence 4558899999998886433 44544222 2223333344444 99999999874 23337888999999999887
Q ss_pred cCCCEEEEcCCCCcchHHH---HHHHHhCCcEEEEeccC-CCCCcChhHHHhhcc-CCceEEEEeccccccccccChHHH
Q psy15216 1480 KRGKHIITVQTEHKSVLDS---IRKLENDGFRVTYLKPK-NNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEI 1554 (2602)
Q Consensus 1480 ~~gd~Vlv~~~~~~s~~~~---~~~~~~~G~~v~~v~~~-~~~~id~d~l~~~i~-~~t~lv~l~~~~n~tG~~~~l~~I 1554 (2602)
++||+|++++++|+++... .... ..+..+..++++ .++.+|+++|++++. .++++|++++++||++. ++++|
T Consensus 129 ~~Gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~l~~i 205 (447)
T 3h7f_A 129 SPGERLLGLDLANGGHLTHGMRLNFS-GKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL--DFAAF 205 (447)
T ss_dssp CTTCEEEEECGGGTCCGGGTCTTSHH-HHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC--CHHHH
T ss_pred CCCCEEEecCcccccccchhhhhhhc-CCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc--CHHHH
Confidence 8999999999999883221 1111 125567777766 357799999999995 57899999999998876 99999
Q ss_pred HHHhhhcCCEEEEecccccCccc----ccCCCCCccEEEEcccc-ccCCCceEEEEEecCCCCccccccccCCccccCCC
Q psy15216 1555 GELCRSKGVIFHCDAAQAVGKID----INIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRS 1629 (2602)
Q Consensus 1555 ~~ia~~~gi~vivD~a~~~g~~~----~~l~~~~~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 1629 (2602)
.++|++||+++|+|++|+.|... .+.. .++|++++|+|| +.||+| |+++.++++.+.+.+...+ +..
T Consensus 206 ~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~G~~g-G~i~~~~~~~~~l~~~~~~------~~~ 277 (447)
T 3h7f_A 206 RSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLGGGRS-GLIVGKQQYAKAINSAVFP------GQQ 277 (447)
T ss_dssp HHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGCCCSC-EEEEECGGGHHHHHHHHTT------TTC
T ss_pred HHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCCCCCe-EEEEECHHHHHHHhhhcCC------ccc
Confidence 99999999999999998765321 1111 246899999999 556887 9999988766655543321 234
Q ss_pred CCcchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhc---CCcEEEeCCCCCCCCceEEEEEec--CCcHHHH
Q psy15216 1630 GTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNISFNF--IEGESLL 1703 (2602)
Q Consensus 1630 gt~~~~~~~al~~aL~~~-~~~~~~~~~~~~~l~~~l~~~L~~~---~~gl~i~~~~~~~~~~~~~~~~~~--~~~~~~~ 1703 (2602)
++++...+.++.+++... ..+++...++..++++++.+.|.+. .+|+.+...+.. .....+.+.. .+...+.
T Consensus 278 ~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 355 (447)
T 3h7f_A 278 GGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTD--VHLVLVDLRDSPLDGQAAE 355 (447)
T ss_dssp SSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCS--SSEEEEECTTSSCCHHHHH
T ss_pred CCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCC--CCEEEEEcCCCCCCHHHHH
Confidence 566666677777777643 3356788889999999999999762 136776542211 2233333322 2334444
Q ss_pred Hhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCC----CCHHHHHHHHHHHHHhh
Q psy15216 1704 MAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEIDFTIKLLKMKE 1766 (2602)
Q Consensus 1704 ~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~----~t~edid~li~~L~~~~ 1766 (2602)
..| +||.++........ ......+++|+++... .+++|+++++++|++..
T Consensus 356 ~~l~~~GI~v~~~~i~~~~-------------~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l 411 (447)
T 3h7f_A 356 DLLHEVGITVNRNAVPNDP-------------RPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATAL 411 (447)
T ss_dssp HHHHHTTEECBC--------------------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCeEEecccCCCCC-------------CCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 444 69998732111100 0001136799987543 57899999999998743
No 425
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.79 E-value=3.1e-19 Score=238.53 Aligned_cols=331 Identities=18% Similarity=0.195 Sum_probs=212.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||+.++.+. +.+.+++.+.+... . . .|. ......+++++++++++. +++++|+|+|+|+++++.++.
T Consensus 46 lD~~~~~~~-~~v~~a~~~~~~~~--~--~-~y~----~~~~~~~l~~~la~~~~~--~~v~~t~ggt~A~~~al~~~~- 112 (467)
T 1ax4_A 46 IDLLTDSGT-NAMSDHQWAAMITG--D--E-AYA----GSRNYYDLKDKAKELFNY--DYIIPAHQGRGAENILFPVLL- 112 (467)
T ss_dssp EECSCSSSC-CCEEHHHHHHHHTC--C--C-CSS----SCHHHHHHHHHHHHHHCC--CEEEEESSHHHHHHHHHHHHH-
T ss_pred eecccCcCC-HHHHHHHHHHHhhc--c--c-ccc----cCccHHHHHHHHHHHcCC--CcEEEcCCcHHHHHHHHHHHH-
Confidence 466565554 56677777766431 1 0 111 113467889999999986 589999999999999999987
Q ss_pred cccc----CCCE---EEEcCCCCcccHHHHHHHHhCCcEEEEeccC----------CCCccChHHHHhhccC----CceE
Q psy15216 81 FYKK----RGKH---IITVQTEHKSVLDSIRKLENDGFRVTYLKPK----------NNGLITLSQLEEKICS----DTIL 139 (2602)
Q Consensus 81 ~~~~----~gd~---Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~----------~~~~ld~e~l~~~i~~----~tkl 139 (2602)
+ +||+ |+++.+.|+++...+.. .|++++.++.. .++.+|+++|++++++ +|++
T Consensus 113 ---~~~~~~Gd~~~~viv~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~ 186 (467)
T 1ax4_A 113 ---KYKQKEGKAKNPVFISNFHFDTTAAHVEL---NGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVA 186 (467)
T ss_dssp ---HHHHHTTCCSSCEEEESSCCHHHHHHHHH---TTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEE
T ss_pred ---HhhccCCCccceEEEeccccchhhHHHhc---cCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeE
Confidence 6 8998 88885444554544444 48888876532 1456899999999974 7999
Q ss_pred EEEecccCcc-ccccc---HHHHHHHHHhcCCEEEEeccccc-----------ccccccCCC------CCccEEEecccc
Q psy15216 140 VSVMLVNNEI-GVIQP---ILEIGELCRSKGVIFHCDAAQAV-----------GKIDINIQN------YKVDLMSFSAHK 198 (2602)
Q Consensus 140 v~i~~~~npT-G~~~~---l~~I~~la~~~g~~livD~a~a~-----------g~~~~dl~~------~~~D~~~~S~~K 198 (2602)
|++++++||| |.++| +++|.++|++||+++|+|++|++ +...+++.. ..+|++++|+||
T Consensus 187 vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK 266 (467)
T 1ax4_A 187 IVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKK 266 (467)
T ss_dssp EEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTS
T ss_pred EEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccc
Confidence 9999999999 88876 57899999999999999998765 222222211 136888999999
Q ss_pred ccCCC-CcEEEEEe-c-CCCCcccceec--CCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy15216 199 IYGPK-GIGALYIR-R-NPRTRIEAQIH--GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGL 273 (2602)
Q Consensus 199 ~~Gp~-G~G~l~~~-~-~~~~~l~~~~~--g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L 273 (2602)
.+|++ | |+++.+ + ++++.+.+... ++. ...++.+...+.++..+++.... ++..++..++++++.+.|
T Consensus 267 ~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L 339 (467)
T 1ax4_A 267 DPLLNIG-GLVAIRDNEEIFTLARQRCVPMEGF----VTYGGLAGRDMAAMVQGLEEGTE--EEYLHYRIGQVKYLGDRL 339 (467)
T ss_dssp TTCCSSC-EEEEESSCHHHHHHHHHHHHHHTCS----TTTTTCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcc-eEEEeCCHHHHHHHHHhhccccccc----cccCCccchHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHH
Confidence 88876 4 777777 5 56555443221 111 11234444444444445542111 223344456677888888
Q ss_pred hhccCceEEeCCCCCCCCceEEEE-------Ecc--cChhHHHHHh---CCeEEcc-cccCCCCCCChHHHHHHcCCCcc
Q psy15216 274 MESIEEIYINGDMNNRIPHNLNIS-------FNF--IEGESLLMAI---KDIAVSS-GSACTSASLEPSYVLRALGCNDE 340 (2602)
Q Consensus 274 ~~~~~g~~l~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~L---~gI~v~~-g~~~~~~~~~~~~~~~~~g~~~~ 340 (2602)
.+ +++.+..+.. ..++.+. ++. .+..++...| +||.+.+ |..+... .+ ..|....
T Consensus 340 ~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~--~~-----~~g~~~~ 407 (467)
T 1ax4_A 340 RE--AGIPIQYPTG---GHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGR--DP-----ATGEQKH 407 (467)
T ss_dssp HH--TTCCBCSSCC---SSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCB--CT-----TTCSBCC
T ss_pred Hh--CCCCcccCCC---ceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCcccccc--cc-----ccccccc
Confidence 76 4666553322 2233333 211 2345566655 5999987 5432110 00 0011111
Q ss_pred CCCCeEEEecCCC-CCHHHHHHHHHHHHhh
Q psy15216 341 LAHSSIRFTIGRF-TTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 341 ~~~~~iRis~~~~-~t~edid~li~~L~~~ 369 (2602)
...+++||+++.+ +|++|+++++++|++.
T Consensus 408 ~~~~~iRls~~~~~~t~e~i~~~~~~l~~~ 437 (467)
T 1ax4_A 408 ADMEFMRLTIARRVYTNDHMDYIADALIGL 437 (467)
T ss_dssp CSCCEEEEECCTTSSCHHHHHHHHHHHHTT
T ss_pred cccceEEEecccccCCHHHHHHHHHHHHHH
Confidence 1237999999854 8999999999999964
No 426
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.79 E-value=9.5e-20 Score=228.79 Aligned_cols=226 Identities=15% Similarity=0.131 Sum_probs=151.8
Q ss_pred eeCHHHHHHHHHHHHHHHHHHhhccccceEEEeeCCC-CCHH--HH--HHHHH--------H----HHHcCCceeEeech
Q psy15216 2135 IKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAY-FNDI--QR--QFTKN--------A----AKLAGLNVLRLLNE 2197 (2602)
Q Consensus 2135 ~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~-f~~~--qr--~~l~~--------A----a~~AGl~~~~li~E 2197 (2602)
.+++..+++.+ +.|++ +. ..+.+ ..+|+++|.. |... || +++.+ + ++.++++.+.++.|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~-~~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SG-LPVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HS-CCSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cC-CCCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 56777777654 55543 21 11222 3699999987 6541 21 11221 1 34456678999999
Q ss_pred hHHHHHHhhhccCCCCceEEEEEeCCceEEEEEEEEeCCEEEEEEEecCCCCchhHHHHHHHHHHHHHHhhhcCChhHHH
Q psy15216 2198 PTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVN 2277 (2602)
Q Consensus 2198 P~AAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~ 2277 (2602)
|.||+++|... ...+..++|+|+||||+|+++++ ++.+.+.+..++..+||.+||+.|.+++.++ .....
T Consensus 149 ~~aa~~~~~~~-~~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~----~~~i~--- 218 (320)
T 2zgy_A 149 SIPAGYEVLQE-LDELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA----RTKGS--- 218 (320)
T ss_dssp SHHHHHHHHHH-SCTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC----SBGGG---
T ss_pred cHHHHHhhhcc-ccCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc----CCCCC---
Confidence 99999988633 23456899999999999999997 4555677777888999999999999888642 11111
Q ss_pred HHHHHHHHH-HHHhcccceEEEEEEecCCceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEEeCcc
Q psy15216 2278 ILMIKSREI-KELLSYQSSVKLNVKLSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGST 2356 (2602)
Q Consensus 2278 ~l~~~~e~~-K~~ls~~~~~~~~i~~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s 2356 (2602)
...+|++ |..- . ...........-+++++.+++++.++++.+.|.+.+++. .+++.|+|+||+|
T Consensus 219 --~~~ae~~lk~~~-~--------~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~vvl~GGga 283 (320)
T 2zgy_A 219 --SYLADDIIIHRK-D--------NNYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHVMVIGGGA 283 (320)
T ss_dssp --HHHHHHHHHTTT-C--------HHHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEEEEESTTH
T ss_pred --HHHHHHHHHHhh-h--------hhcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeEEEECChH
Confidence 1234444 3220 0 000000000112456666777777777777777666652 5789999999999
Q ss_pred chHHHHHHHHhhcCC---cccCCCCccchhhhHHHHHh
Q psy15216 2357 RMKHIHEGVSNFFKT---TLLTSIDPDKAVVFGAAIQA 2391 (2602)
Q Consensus 2357 ~~p~v~~~l~~~f~~---~~~~~~~p~~aVa~GAa~~a 2391 (2602)
++ +++.|++.|+. ++..+.||++|+|+||++++
T Consensus 284 ~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 284 EL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 98 99999999987 57889999999999999876
No 427
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.67 E-value=6.2e-21 Score=248.74 Aligned_cols=315 Identities=15% Similarity=0.156 Sum_probs=221.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHhhhhh
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHF 1477 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~----g--~~~~~iv~t~gaT~al~~al~~l~~~ 1477 (2602)
+.++.+.+++.+.+... .+.+... ..++|+.+++++ | +++++|++|+|+++|+.+++.++.
T Consensus 44 ~~~~~v~~a~~~~~~~~-------~~~y~~~----~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-- 110 (392)
T 3b1d_A 44 EVMPEVKQAIHDYAEQL-------VYGYTYA----SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT-- 110 (392)
Confidence 45667788887776431 0111111 445666666654 5 567899999999999999999987
Q ss_pred hccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC---CCCcChhHHHhhcc-CCceEEEEeccccccccccC---
Q psy15216 1478 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN---NGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQP--- 1550 (2602)
Q Consensus 1478 ~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~---~~~id~d~l~~~i~-~~t~lv~l~~~~n~tG~~~~--- 1550 (2602)
++||+|+++.+.|+++...+... |++++.++.++ ++.+|+++++++++ +++++|++++|+||||.++|
T Consensus 111 --~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~ 185 (392)
T 3b1d_A 111 --KEGEAVLINSPVYPPFARSVRLN---NRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREV 185 (392)
Confidence 79999999999999988766555 88888888753 24589999999998 78899999999999999988
Q ss_pred hHHHHHHhhhcCCEEEEecccccCcc----cccC---CC--CCccEEEEccccccCCCc--eEEEEEecC-CCCcccccc
Q psy15216 1551 ILEIGELCRSKGVIFHCDAAQAVGKI----DINI---QN--YKVDLMSFSAHKIYGPKG--IGALYIRRN-PRTRIEAQI 1618 (2602)
Q Consensus 1551 l~~I~~ia~~~gi~vivD~a~~~g~~----~~~l---~~--~~~D~~v~S~~K~~gp~G--~G~l~~~~~-~~~~l~~~~ 1618 (2602)
+++|.++|++||+++|+|++|+.... ..++ .. .+..+++.|+||.+|++| +||++++++ +++.+....
T Consensus 186 l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 265 (392)
T 3b1d_A 186 LEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQ 265 (392)
Confidence 88999999999999999999875321 1122 11 345688899999887666 799998754 776665432
Q ss_pred ccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--
Q psy15216 1619 HGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-- 1696 (2602)
Q Consensus 1619 ~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-- 1696 (2602)
. .+..++++...+.++.++|+.....+++.++++.++++++.+.|.+.++++.+..+.... ...+.++.
T Consensus 266 ~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~---~~~i~~~~~~ 336 (392)
T 3b1d_A 266 L------VNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTY---LIWLDFSDYG 336 (392)
Confidence 1 111234555556656566664344567788888888999988887634676655332211 11123332
Q ss_pred CCcHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1697 IEGESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1697 ~~~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.+..++...| +||.+++|..|... ..+++||+++. +.+++++++++|++
T Consensus 337 ~~~~~l~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRi~~~~--~~e~i~~~l~~l~~ 388 (392)
T 3b1d_A 337 LTDDALFTLLHDQAKVILNRGSDYGSE-----------------GELHARLNIAA--PKSLVEEICKRIVC 388 (392)
Confidence 2344555554 58999888766421 12789999875 57899999999886
No 428
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.79 E-value=3.4e-18 Score=221.32 Aligned_cols=306 Identities=13% Similarity=0.074 Sum_probs=206.0
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHH--HHhCC
Q psy15216 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK--LENDG 110 (2602)
Q Consensus 33 ~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~--~~~~G 110 (2602)
+.+++...+..+++++++++++|.+ .+++++|+++|+.+ +.++. ++||+|+++.+.|++....+.. +.+.|
T Consensus 59 ~~y~r~~~p~~~~l~~~la~l~g~~--~~~~~~sG~~Ai~~-~~~l~----~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g 131 (400)
T 3nmy_A 59 FEYSRTHNPTRFAYERCVAALEGGT--RAFAFASGMAATST-VMELL----DAGSHVVAMDDLYGGTFRLFERVRRRTAG 131 (400)
T ss_dssp CCBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHH-HHTTS----CTTCEEEEESSCCHHHHHHHHHTHHHHHC
T ss_pred cccccCCCHHHHHHHHHHHHHhCCC--CEEEecCHHHHHHH-HHHHc----CCCCEEEEeCCCchHHHHHHHHhhHhhcC
Confidence 4455555667889999999999975 67777888999998 45555 7999999999999976665543 45569
Q ss_pred cEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEecccccccccccCCCCCcc
Q psy15216 111 FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 190 (2602)
Q Consensus 111 ~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~~dl~~~~~D 190 (2602)
+++++++.+ |+++++++++++|++|++++|+||||.+.|+++|+++|++||+++|+|++|+.+..... ..+++|
T Consensus 132 ~~~~~v~~~-----d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~-~~~g~d 205 (400)
T 3nmy_A 132 LDFSFVDLT-----DPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRP-LSLGAD 205 (400)
T ss_dssp CEEEEECTT-----SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCG-GGGTCS
T ss_pred eEEEEECCC-----CHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCCh-hhcCCc
Confidence 999999865 89999999999999999999999999999999999999999999999999986543211 235789
Q ss_pred EEEeccccccCCCC--c-E-EEEE-ecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHH
Q psy15216 191 LMSFSAHKIYGPKG--I-G-ALYI-RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFL 265 (2602)
Q Consensus 191 ~~~~S~~K~~Gp~G--~-G-~l~~-~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l 265 (2602)
+++.|++|++|.+| + | +++. ++++.+.+..... ....+.+....+.+..+++ .+....++..++
T Consensus 206 iv~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~-------~~g~~~~~~~a~~~l~~l~----~l~~r~~~~~~~ 274 (400)
T 3nmy_A 206 LVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN-------SIGGVQGPFDSFLALRGLK----TLPLRMRAHCEN 274 (400)
T ss_dssp EEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHH-------HHCCBCCHHHHHHHHHHHT----THHHHHHHHHHH
T ss_pred EEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHH-------hcCCCCCHHHHHHHHHhHh----HHHHHHHHHHHH
Confidence 99999999766443 3 5 3443 3434444433221 1112333333332223333 345566677888
Q ss_pred HHHHHHHHhhccCceEEe-CCC--CC-----------CCCceEEEEEccc--ChhHHHHHh--CCeEEcccccCCC---C
Q psy15216 266 QKRLYNGLMESIEEIYIN-GDM--NN-----------RIPHNLNISFNFI--EGESLLMAI--KDIAVSSGSACTS---A 324 (2602)
Q Consensus 266 ~~~l~~~L~~~~~g~~l~-~~~--~~-----------~~~~~~~~~~~~~--~~~~~~~~L--~gI~v~~g~~~~~---~ 324 (2602)
+..+.+.|.+ .|.+..+ -|. +. ....++.|.++.. ....++..+ .++.++.|..++- +
T Consensus 275 a~~l~~~L~~-~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p 353 (400)
T 3nmy_A 275 ALALAQWLET-HPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHP 353 (400)
T ss_dssp HHHHHHHHTT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECT
T ss_pred HHHHHHHHHc-CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCc
Confidence 8888888877 5766533 221 11 1123444555431 234566666 3555555544321 1
Q ss_pred ----C-CChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 325 ----S-LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (2602)
Q Consensus 325 ----~-~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~ 367 (2602)
+ ..+.......|+++ +.+|+|+|..+.++.++.+.++|+
T Consensus 354 ~~~~~~~~~~~~~~~~gi~~----~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 354 AVMTHASIPVARREQLGISD----ALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp TTTTTTTSCHHHHHHHTCCT----TEEEEECCSSCHHHHHHHHHHHHC
T ss_pred cccccccCCHHHHHhcCCCc----CeEEEEeCcCCHHHHHHHHHHHHh
Confidence 1 11333455667763 899999999887777777766665
No 429
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.79 E-value=1.3e-18 Score=232.57 Aligned_cols=360 Identities=17% Similarity=0.159 Sum_probs=222.1
Q ss_pred cHHHHHHHHHhcCCCccccceeeeeceeeeccCCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHH
Q psy15216 1368 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVA 1447 (2602)
Q Consensus 1368 ~~~~v~~aL~~~g~~~~~~ei~~iP~~~v~L~~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia 1447 (2602)
.+......++..|..+.....+ ..|+|.......+.+.+++.+.+.... . .|.. .....++|++++
T Consensus 21 ~~~~~~~~~~~~g~~~~~~~~g-----~~ylD~~~~~~~~~v~~a~~~~~~~~~--~---~y~~----~~~~~~l~~~la 86 (467)
T 1ax4_A 21 SREEREAALKEAGYNPFLLPSS-----AVYIDLLTDSGTNAMSDHQWAAMITGD--E---AYAG----SRNYYDLKDKAK 86 (467)
T ss_dssp CHHHHHHHHHHTTSCGGGSCGG-----GCSEECSCSSSCCCEEHHHHHHHHTCC--C---CSSS----CHHHHHHHHHHH
T ss_pred chhHHHHHHHhcCcCcccCCCC-----ceeeecccCcCCHHHHHHHHHHHhhcc--c---cccc----CccHHHHHHHHH
Confidence 3455556777777776543322 234443222222566677766654311 0 1111 123568899999
Q ss_pred HHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCE---EEEcCCCCcchHHHHHHHHhCCcEEEEeccC---------
Q psy15216 1448 QLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH---IITVQTEHKSVLDSIRKLENDGFRVTYLKPK--------- 1515 (2602)
Q Consensus 1448 ~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~---Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~--------- 1515 (2602)
++++. ++++||+|+|+|+++++.++......+||+ |+++.+.|+++...+... |.+++.++..
T Consensus 87 ~~~~~--~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~ 161 (467)
T 1ax4_A 87 ELFNY--DYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELN---GCKAINIVTEKAFDSETYD 161 (467)
T ss_dssp HHHCC--CEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHT---TCEEEECBCGGGGCTTSCC
T ss_pred HHcCC--CcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHhcc---CCceecccccccccccccC
Confidence 99986 589999999999999999987100118998 999855555555555443 8888876532
Q ss_pred -CCCCcChhHHHhhccC----CceEEEEecccccc-ccccC---hHHHHHHhhhcCCEEEEeccccc-----------Cc
Q psy15216 1516 -NNGLITLSQLEEKICS----DTILVSVMLVNNEI-GVIQP---ILEIGELCRSKGVIFHCDAAQAV-----------GK 1575 (2602)
Q Consensus 1516 -~~~~id~d~l~~~i~~----~t~lv~l~~~~n~t-G~~~~---l~~I~~ia~~~gi~vivD~a~~~-----------g~ 1575 (2602)
.++.+|+++|++++++ +|++|++++++||+ |.++| +++|.++|++||+++|+|++|+. +.
T Consensus 162 ~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~ 241 (467)
T 1ax4_A 162 DWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKY 241 (467)
T ss_dssp TTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGG
T ss_pred CcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhcccccccc
Confidence 1456899999999974 78999999999999 88876 67899999999999999998765 22
Q ss_pred ccccCCC------CCccEEEEccccccCCC-ceEEEEEe-c-CCCCccccccc--cCCccccCCCCCcchhHHHHHHHHH
Q psy15216 1576 IDINIQN------YKVDLMSFSAHKIYGPK-GIGALYIR-R-NPRTRIEAQIH--GGGHEYGLRSGTLATHQIVGMGEAF 1644 (2602)
Q Consensus 1576 ~~~~l~~------~~~D~~v~S~~K~~gp~-G~G~l~~~-~-~~~~~l~~~~~--g~~~~~~~~~gt~~~~~~~al~~aL 1644 (2602)
...++.. ..+|++++|+||.+|++ | |+++.+ + ++++.+..... ++. ...++.+...+.++..++
T Consensus 242 ~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l 316 (467)
T 1ax4_A 242 KNATIKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPMEGF----VTYGGLAGRDMAAMVQGL 316 (467)
T ss_dssp TTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHHTCS----TTTTTCCHHHHHHHHHHH
T ss_pred CCCchhhhhhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhccccccc----cccCCccchHHHHHHHHH
Confidence 2222211 13688899999988876 5 777777 4 55554433211 111 123445555555554455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEE-------Eec--CCcHHHHHhc---CCEEEc
Q psy15216 1645 RLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNIS-------FNF--IEGESLLMAI---KDIAVS 1712 (2602)
Q Consensus 1645 ~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~L---~gI~v~ 1712 (2602)
+.... ++...+..++++++.+.|.+ +++.+..+.. .....+. ++. .+..++...| +||.+.
T Consensus 317 ~~~~~--~~~~~~~~~~~~~l~~~L~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~ 389 (467)
T 1ax4_A 317 EEGTE--EEYLHYRIGQVKYLGDRLRE--AGIPIQYPTG---GHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAV 389 (467)
T ss_dssp HHTTC--HHHHHHHHHHHHHHHHHHHH--TTCCBCSSCC---SSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECE
T ss_pred HHhhh--hhHHHHHHHHHHHHHHHHHh--CCCCcccCCC---ceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceee
Confidence 42211 12333444667788888876 4665543321 1222233 211 1234555554 699998
Q ss_pred c-ccccCCCCCChhHHHHHcCCCccccCCeEEEecCCC-CCHHHHHHHHHHHHHh
Q psy15216 1713 S-GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF-TTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1713 ~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~-~t~edid~li~~L~~~ 1765 (2602)
+ |..+.... + ..|.......+++||+++.+ +|.+|+++++++|++.
T Consensus 390 ~~g~~~~~~~--~-----~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~ 437 (467)
T 1ax4_A 390 EIGSFLLGRD--P-----ATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGL 437 (467)
T ss_dssp EESHHHHCBC--T-----TTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTT
T ss_pred ecCccccccc--c-----ccccccccccceEEEecccccCCHHHHHHHHHHHHHH
Confidence 7 54321100 0 00111111237999999854 8999999999999873
No 430
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.78 E-value=2.7e-19 Score=233.80 Aligned_cols=310 Identities=15% Similarity=0.081 Sum_probs=212.0
Q ss_pred CCCCHHHHHHHHHHHhhc--cCCCCCccchhHHHHHHHHHHHHHHHHHHh---C---CCCCcEEE--eCCHHHHHHHHHH
Q psy15216 1403 TPIDPRVVDKMIPYLRVQ--FGNPASRNHIYGWTAEKAIEKARNEVAQLI---Y---ADPREIIW--TSGATESNNLAIK 1472 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~--~~np~~~~~~~~~~~~~~~~~lr~~ia~~~---g---~~~~~iv~--t~gaT~al~~al~ 1472 (2602)
.+.++.+.+++.+.++.. ..++. .....++|+++++++ + +++++|++ |+|+++|+++++.
T Consensus 43 ~~~~~~v~~a~~~~~~~~~~~~y~~----------~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~ 112 (396)
T 2q7w_A 43 TPVLTSVKKAEQYLLENETTKNYLG----------IDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAAD 112 (396)
T ss_dssp CCCCHHHHHHHHHHHHHCCCCCCCC----------TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHhhcCcccccCCCC----------CCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHH
Confidence 356788999998877542 11111 112467899999988 2 24778998 9999999999988
Q ss_pred hhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccC--CCCCcChhHHHhhccC---CceEEEEecccccccc
Q psy15216 1473 GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICS---DTILVSVMLVNNEIGV 1547 (2602)
Q Consensus 1473 ~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~id~d~l~~~i~~---~t~lv~l~~~~n~tG~ 1547 (2602)
++. .+.+||+|+++.|+|+++...+... |++++.++.+ .++.+|++++++++++ +++++++++|+||||.
T Consensus 113 ~~~--~~~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~ 187 (396)
T 2q7w_A 113 FLA--KNTSVKRVWVSNPSWPNHKSVFNSA---GLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGI 187 (396)
T ss_dssp HHH--HHSCCCEEEEEESCCTHHHHHHHHT---TCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCC
T ss_pred HHH--HhCCCCEEEEcCCCchhHHHHHHHc---CCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence 764 1269999999999999987766554 9999999885 4677999999999975 4788999999999999
Q ss_pred ccC---hHHHHHHhhhcCCEEEEecccccCcc-------ccc-CCCC-CccEEEEccccccCCCc--eEEEEE---ecCC
Q psy15216 1548 IQP---ILEIGELCRSKGVIFHCDAAQAVGKI-------DIN-IQNY-KVDLMSFSAHKIYGPKG--IGALYI---RRNP 1610 (2602)
Q Consensus 1548 ~~~---l~~I~~ia~~~gi~vivD~a~~~g~~-------~~~-l~~~-~~D~~v~S~~K~~gp~G--~G~l~~---~~~~ 1610 (2602)
++| +++|.++|++||+++|+|++|+.... ++. +... ..++++.|+||.+|++| +||+++ +++.
T Consensus 188 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~ 267 (396)
T 2q7w_A 188 DPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSET 267 (396)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHH
Confidence 998 55799999999999999999864321 111 2111 24578889999999888 799997 3322
Q ss_pred CCccccccccCCccccCCCCCcchhHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhhcCC--cEEEeCCC
Q psy15216 1611 RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESIE--EIYINGDM 1682 (2602)
Q Consensus 1611 ~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~------~~~~~~~~~~~~~l~~~l~~~L~~~~~--gl~i~~~~ 1682 (2602)
++.+....... .....++++...+.++.++|+.. ..++++..+++.++++++.+.|.+..+ ++.+..+.
T Consensus 268 ~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 344 (396)
T 2q7w_A 268 VDRAFSQMKAA---IRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQ 344 (396)
T ss_dssp HHHHHHHHHHH---HHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHC
T ss_pred HHHHHHHHHHH---HhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCC
Confidence 22221111000 01122345666666666766532 245677888889999999999987211 24333221
Q ss_pred CCCCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHH
Q psy15216 1683 NNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIK 1760 (2602)
Q Consensus 1683 ~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~ 1760 (2602)
..++.+...+...+...+ +||.+++ .+||+++.. |.++++++++
T Consensus 345 ------~~~~~~~~~~~~~~~~~l~~~gv~v~~---------------------------~~Ris~~~~-~~e~i~~~~~ 390 (396)
T 2q7w_A 345 ------NGMFSFSGLTKEQVLRLREEFGVYAVA---------------------------SGRVNVAGM-TPDNMAPLCE 390 (396)
T ss_dssp ------CSSEEECCCCHHHHHHHHHHHCEECCT---------------------------TCEEEGGGC-CTTTHHHHHH
T ss_pred ------CceEEEecCCHHHHHHHHHhcCeeecC---------------------------CceEEEeec-CHHHHHHHHH
Confidence 112233333333343333 5888752 269999854 8899999999
Q ss_pred HHHH
Q psy15216 1761 LLKM 1764 (2602)
Q Consensus 1761 ~L~~ 1764 (2602)
+|++
T Consensus 391 ~l~~ 394 (396)
T 2q7w_A 391 AIVA 394 (396)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9986
No 431
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.78 E-value=1.3e-17 Score=220.08 Aligned_cols=317 Identities=8% Similarity=0.024 Sum_probs=214.3
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhcc----
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK---- 1480 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~---- 1480 (2602)
.++.+++++.+.++....++.. .+. .....+++++++++++.++++|+||+|+++|++.++.++.. ..+
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~-~~~-----~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~-~~~~~g~ 132 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMSHVMFG-GIT-----HAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQ-YWQAKGE 132 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCCCS-SEE-----CHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHH-HHHHHTC
T ss_pred CCHHHHHHHHHHHHhccccccc-ccC-----CHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHH-HhcccCC
Confidence 5789999999998764333221 111 12356788899999998888999999999999999987541 112
Q ss_pred CCCEEEEcCCCCcchHHHHHHHHh-----------CCcEEEEeccCC-----C-CCcChhHHHhhcc---CCceEEEEec
Q psy15216 1481 RGKHIITVQTEHKSVLDSIRKLEN-----------DGFRVTYLKPKN-----N-GLITLSQLEEKIC---SDTILVSVML 1540 (2602)
Q Consensus 1481 ~gd~Vlv~~~~~~s~~~~~~~~~~-----------~G~~v~~v~~~~-----~-~~id~d~l~~~i~---~~t~lv~l~~ 1540 (2602)
||++|+++++.|+.+......+.. ....+..++.+. . +.+|+++|+++++ +++++|++++
T Consensus 133 ~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p 212 (429)
T 1s0a_A 133 ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEP 212 (429)
T ss_dssp CCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECS
T ss_pred CCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEee
Confidence 689999999988775443322100 001344555431 2 3589999999997 5677887777
Q ss_pred c-ccccccccC----hHHHHHHhhhcCCEEEEecccc-cCcc----cccCCCCCccEEEEccccc-cCC-CceEEEEEec
Q psy15216 1541 V-NNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKI-YGP-KGIGALYIRR 1608 (2602)
Q Consensus 1541 ~-~n~tG~~~~----l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~~~~~D~~v~S~~K~-~gp-~G~G~l~~~~ 1608 (2602)
+ +||||.+.| +++|.++|++||+++|+|++|+ +|.. .++.....+|++ |++|. .|+ -++|++++++
T Consensus 213 ~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~G~~~iG~~~~~~ 290 (429)
T 1s0a_A 213 IVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTGGTMTLSATLTTR 290 (429)
T ss_dssp SEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTSSSCCEEEEECH
T ss_pred cccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccCCCccceEEEeCH
Confidence 7 899998887 9999999999999999999997 4422 122223457776 45694 443 4589999987
Q ss_pred CCCCccccccccCCccccC-C--CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEeCCCC
Q psy15216 1609 NPRTRIEAQIHGGGHEYGL-R--SGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES--IEEIYINGDMN 1683 (2602)
Q Consensus 1609 ~~~~~l~~~~~g~~~~~~~-~--~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~--~~gl~i~~~~~ 1683 (2602)
++++.+.+. + ...+ . ..+.+...+.+..++++.... +...++..++++++.++|.+. .+++....+ .
T Consensus 291 ~~~~~l~~~---~--~~~~~~~~t~~~n~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~ 362 (429)
T 1s0a_A 291 EVAETISNG---E--AGCFMHGPTFMGNPLACAAANASLAILES--GDWQQQVADIEVQLREQLAPARDAEMVADVRV-L 362 (429)
T ss_dssp HHHHHHHTS---T--TSSCSCCCTTTTCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEE-E
T ss_pred HHHHHhhcC---C--CcccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-e
Confidence 765544321 0 0111 1 224566777777788875543 346677888899999998762 245542211 1
Q ss_pred CCCCceEEEEEec-CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHH
Q psy15216 1684 NRIPHNLNISFNF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIK 1760 (2602)
Q Consensus 1684 ~~~~~~~~~~~~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~ 1760 (2602)
..+..+.++. .+...+...| +||.+++. .+++||+++..+|++|++++++
T Consensus 363 ---g~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~------------------------~~~iRis~~~~~t~e~i~~~~~ 415 (429)
T 1s0a_A 363 ---GAIGVVETTHPVNMAALQKFFVEQGVWIRPF------------------------GKLIYLMPPYIILPQQLQRLTA 415 (429)
T ss_dssp ---TTEEEEEESSCBCHHHHHHHHHHTTEECCCB------------------------TTEEEECCCTTCCHHHHHHHHH
T ss_pred ---eEEEEEEECCcccHHHHHHHHHHCCCEEecc------------------------CCEEEEECCCCCCHHHHHHHHH
Confidence 1233444442 2455666655 78988642 1689999999999999999999
Q ss_pred HHHHh
Q psy15216 1761 LLKMK 1765 (2602)
Q Consensus 1761 ~L~~~ 1765 (2602)
+|++.
T Consensus 416 ~l~~~ 420 (429)
T 1s0a_A 416 AVNRA 420 (429)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99973
No 432
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.78 E-value=4e-19 Score=233.35 Aligned_cols=309 Identities=13% Similarity=0.042 Sum_probs=212.3
Q ss_pred CCCCHHHHHHHHH-HHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHh-C-----CCCCcEEE--eCCHHHHHHHHHHh
Q psy15216 1403 TPIDPRVVDKMIP-YLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI-Y-----ADPREIIW--TSGATESNNLAIKG 1473 (2602)
Q Consensus 1403 ~~~~~~v~eal~~-~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~-g-----~~~~~iv~--t~gaT~al~~al~~ 1473 (2602)
.+.++.+.+++.+ .++.. ..+ .|.. .....++|+.+++++ + +++++|++ |+|+++|+++++..
T Consensus 46 ~~~~~~v~~a~~~~~~~~~--~~~--~y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~ 117 (412)
T 1yaa_A 46 PWVLPSVKAAEKLIHNDSS--YNH--EYLG----ITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKF 117 (412)
T ss_dssp BCCCHHHHHHHHHHHTCTT--CCC--CCCC----TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHhhhcCcc--ccc--CCCC----CCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHH
Confidence 4567889999988 76521 000 0110 112567889999988 3 25789999 99999999998543
Q ss_pred hhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEecc-CC-CCCcChhHHHhhccCC---ceEEEEeccccccccc
Q psy15216 1474 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP-KN-NGLITLSQLEEKICSD---TILVSVMLVNNEIGVI 1548 (2602)
Q Consensus 1474 l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~-~~-~~~id~d~l~~~i~~~---t~lv~l~~~~n~tG~~ 1548 (2602)
+. .+++||+|++++|+|+++...+.. .|++++.++. ++ ++.+|+++|+++++++ +.++++++|+||||.+
T Consensus 118 ~~--~~~~gd~Vl~~~p~~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~ 192 (412)
T 1yaa_A 118 FS--KFFPDKLVYLSKPTWANHMAIFEN---QGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLD 192 (412)
T ss_dssp HH--HHCTTCCEEEEESCCTTHHHHHHT---TTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCC
T ss_pred HH--HhCCCCEEEEeCCCCccHHHHHHH---cCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC
Confidence 32 126999999999999998766554 4999999987 43 6779999999999753 4566669999999999
Q ss_pred cC---hHHHHHHhhhcCCEEEEecccccCc--------ccc-cCCCCC----ccEEEEccccccCCCc--eEEEE--E--
Q psy15216 1549 QP---ILEIGELCRSKGVIFHCDAAQAVGK--------IDI-NIQNYK----VDLMSFSAHKIYGPKG--IGALY--I-- 1606 (2602)
Q Consensus 1549 ~~---l~~I~~ia~~~gi~vivD~a~~~g~--------~~~-~l~~~~----~D~~v~S~~K~~gp~G--~G~l~--~-- 1606 (2602)
+| +++|.++|++||+++|+|++|+... .++ ++...+ .++++.|+||.+||+| +||++ .
T Consensus 193 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~ 272 (412)
T 1yaa_A 193 PTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTK 272 (412)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecC
Confidence 88 5578899999999999999985321 122 222222 3577889999999888 79998 6
Q ss_pred ---ecC----CCCccccccccCCccccCCCCCcchhHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy15216 1607 ---RRN----PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESI 1673 (2602)
Q Consensus 1607 ---~~~----~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~------~~~~~~~~~~~~~l~~~l~~~L~~~~ 1673 (2602)
+++ +++.+.... .....+++...+.++..+|+.. ..++++.++++.++++++.+.|.+..
T Consensus 273 ~~~~~~~~~~l~~~l~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 273 QAQNKTIKPAVTSQLAKII-------RSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp CTTHHHHHHHHHHHHHHHH-------HTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHH-------hhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 443 343333211 1122355666677777777632 24678888999999999999998732
Q ss_pred C--cEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCC
Q psy15216 1674 E--EIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF 1749 (2602)
Q Consensus 1674 ~--gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~ 1749 (2602)
+ ++.+..+.. .++.+...+...+...+ +||.+++ ++|||++.
T Consensus 346 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~gi~v~~---------------------------~~Ris~~~- 391 (412)
T 1yaa_A 346 TPGNWDHIVNQC------GMFSFTGLTPQMVKRLEETHAVYLVA---------------------------SGRASIAG- 391 (412)
T ss_dssp CSSCCTHHHHCC------SSEEECCCCHHHHHHHHHHHCEECCT---------------------------TSEEEGGG-
T ss_pred CCCCeeeeccCc------eEEEeeCCCHHHHHHHHHhCCEEecc---------------------------CcEEEEcc-
Confidence 1 244332211 12333344444443333 5888762 37999984
Q ss_pred CCHHHHHHHHHHHHHh
Q psy15216 1750 TTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1750 ~t~edid~li~~L~~~ 1765 (2602)
.+.+++++++++|++.
T Consensus 392 ~~~~~i~~~~~~l~~~ 407 (412)
T 1yaa_A 392 LNQGNVEYVAKAIDEV 407 (412)
T ss_dssp CCTTTHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHHH
Confidence 5889999999999873
No 433
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.78 E-value=8.3e-18 Score=219.52 Aligned_cols=304 Identities=13% Similarity=0.133 Sum_probs=213.3
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCC
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 1483 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd 1483 (2602)
..++.+.+++.+.++... +... .+ ......+++++++++++++++++++|+|+++|+..++.++.. +.+|+
T Consensus 61 ~~~~~v~~a~~~~~~~~~-~~~~-~~-----~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~--~~~~~ 131 (395)
T 1vef_A 61 HGNPEVVEAVKRQAETLM-AMPQ-TL-----PTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARA--HTGRK 131 (395)
T ss_dssp BTCHHHHHHHHHHHHHCC-CCCT-TS-----CCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHH--HHSCC
T ss_pred CCCHHHHHHHHHHHHhCC-CCcc-cc-----CCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHH--HhCCC
Confidence 478899999999987532 2211 11 124678899999999988778999999999999999987631 24789
Q ss_pred EEEEcCCCCcchH-HHHHHHHhCCcE------------EEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccC
Q psy15216 1484 HIITVQTEHKSVL-DSIRKLENDGFR------------VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP 1550 (2602)
Q Consensus 1484 ~Vlv~~~~~~s~~-~~~~~~~~~G~~------------v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~ 1550 (2602)
+|+++++.|++.. ...... |.+ +..++ ..|+++|++++++++++|++++++||||.+.|
T Consensus 132 ~vi~~~~~y~~~~~~~~~~~---g~~~~~~~~~p~~~~~~~~~-----~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~ 203 (395)
T 1vef_A 132 KFVAAMRGFSGRTMGSLSVT---WEPKYREPFLPLVEPVEFIP-----YNDVEALKRAVDEETAAVILEPVQGEGGVRPA 203 (395)
T ss_dssp EEEEETTCCCCSSHHHHHTC---CCHHHHGGGCSCSSCEEEEC-----TTCHHHHHHHCCTTEEEEEECSEETTTTSEEC
T ss_pred eEEEEcCCcCCCchhhhhhc---CCcccccccCCCCCCeeEeC-----CCcHHHHHHHhccCEEEEEEeCccCCCCccCC
Confidence 9999999887643 333322 433 22332 14899999999999999999999999999888
Q ss_pred ----hHHHHHHhhhcCCEEEEecccc-cCcc----cccCCCCCccEEEEccccccC-CCceEEEEEecCCCCcccccccc
Q psy15216 1551 ----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHG 1620 (2602)
Q Consensus 1551 ----l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~~~~~D~~v~S~~K~~g-p~G~G~l~~~~~~~~~l~~~~~g 1620 (2602)
+++|.++|++||+++|+|++|+ ++.. +++.....+|++ |+||.++ +.++|++++++++++.+.+.
T Consensus 204 ~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~~~~~~l~~~--- 278 (395)
T 1vef_A 204 TPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMREEVARSMPKG--- 278 (395)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEHHHHHTSCTT---
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEcccccCCCceEEEEehHHHHhhhccC---
Confidence 9999999999999999999998 3221 122223457866 6799554 34589999998765555431
Q ss_pred CCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc--EEEeCCCCCCCCceEEEEEecCC
Q psy15216 1621 GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEE--IYINGDMNNRIPHNLNISFNFIE 1698 (2602)
Q Consensus 1621 ~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g--l~i~~~~~~~~~~~~~~~~~~~~ 1698 (2602)
. .....+++...+.++.++++.... +...++..++++++.+.|.+ ++. +... ++ ...+..+.++. +
T Consensus 279 ~----~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~-~~---~g~~~~~~~~~-~ 346 (395)
T 1vef_A 279 G----HGTTFGGNPLAMAAGVAAIRYLER--TRLWERAAELGPWFMEKLRA-IPSPKIREV-RG---MGLMVGLELKE-K 346 (395)
T ss_dssp S----SCCSSTTCHHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHT-SCCTTEEEE-EE---ETTEEEEEESS-C
T ss_pred C----cCCCcCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH-hhcCceEEE-EE---EEEEEEEEEcC-h
Confidence 0 111234566677777778875543 45678888899999999977 322 1111 10 12333444442 2
Q ss_pred cHHHHHhc---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1699 GESLLMAI---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1699 ~~~~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
..++...| +||.++++. .+++||+++.+++.+++++++++|++
T Consensus 347 ~~~l~~~l~~~~gi~v~~~~-----------------------~~~iRi~~~~~~~~~~i~~~~~~l~~ 392 (395)
T 1vef_A 347 AAPYIARLEKEHRVLALQAG-----------------------PTVIRFLPPLVIEKEDLERVVEAVRA 392 (395)
T ss_dssp SHHHHHHHHHHHCEECEESS-----------------------TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCeEEecCC-----------------------CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 45555544 488887641 27899999989999999999999986
No 434
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.78 E-value=1.1e-18 Score=204.10 Aligned_cols=123 Identities=60% Similarity=0.942 Sum_probs=119.7
Q ss_pred eccccccceEEeeccEEEEEEecCCcCCCCcEEEEEeecccccceeEEEeecCcccccCCceeEEEEeeCCCCCCCCccE
Q psy15216 2407 LDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRAR 2486 (2602)
Q Consensus 2407 ~d~~~~~~gi~~~~~~~~~ii~k~t~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~~ 2486 (2602)
.|++|++|||++.+|.|.+||+||++||++++..|+|..|||+.+.|.||||++..+.+|..||+|.|+|+||.|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCccEEEEEEeecCCcEEEEEEecCCCCChHHHhc
Q psy15216 2487 IKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKN 2529 (2602)
Q Consensus 2487 i~v~f~id~~g~l~V~a~~~~tg~~~~~~i~~~~~l~~~ei~~ 2529 (2602)
|+|+|+||.||+|+|+|.++.||++..++|...++||++||++
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~Ls~eei~~ 123 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIAS 123 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSCCCHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEeccCCCHHHHHH
Confidence 9999999999999999999999999999999988899999996
No 435
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.77 E-value=1.2e-17 Score=220.27 Aligned_cols=314 Identities=13% Similarity=0.111 Sum_probs=212.9
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHh-CCCCCcEEEeCCHHHHHHHHHH---hccccc
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI-YADPREIIWTSGATESNNLAIK---GAAHFY 82 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~-g~~~~~Iv~t~g~T~al~~~~~---~l~~~~ 82 (2602)
+.+++.+.+++.+.+... .+... .+.......++++++++++ |..+++|++++|+++|+++++. ++.
T Consensus 56 g~~~~~v~~a~~~~~~~~-~~~~~-----~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~--- 126 (426)
T 1sff_A 56 GHLHPKVVAAVEAQLKKL-SHTCF-----QVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT--- 126 (426)
T ss_dssp CBTCHHHHHHHHHHTTTC-SCCCT-----TTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHH---
T ss_pred CCCCHHHHHHHHHHHHhC-CCccc-----cccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhh---
Confidence 347889999999988642 11111 1222346788999999999 5233789999999999999988 454
Q ss_pred ccCCCEEEEcCCCCcccHH-HHHHHHhC-----Cc-----EEEEeccCC-----CCccChHHHHhhcc-----CCceEEE
Q psy15216 83 KKRGKHIITVQTEHKSVLD-SIRKLEND-----GF-----RVTYLKPKN-----NGLITLSQLEEKIC-----SDTILVS 141 (2602)
Q Consensus 83 ~~~gd~Vlv~~~~~~s~~~-~~~~~~~~-----G~-----~v~~v~~~~-----~~~ld~e~l~~~i~-----~~tklv~ 141 (2602)
++| .|++.++.|+++.. ++...... +. .++.++.+. ++.+|+++|+++++ +++++|+
T Consensus 127 -~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~ 204 (426)
T 1sff_A 127 -KRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIV 204 (426)
T ss_dssp -TCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred -CCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEE
Confidence 565 88999999987654 33332110 11 266666643 23478999999986 4678887
Q ss_pred Eec-ccCccccccc----HHHHHHHHHhcCCEEEEecccc-cccc----cccCCCCCccEEEeccccccCCCC--cEEEE
Q psy15216 142 VML-VNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGPKG--IGALY 209 (2602)
Q Consensus 142 i~~-~~npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~----~~dl~~~~~D~~~~S~~K~~Gp~G--~G~l~ 209 (2602)
+++ ++| ||.+.+ +++|.++|++||+++|+|++|+ ++.. .++.....+|++ |++|.+|+ | +||++
T Consensus 205 ~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-GlriG~~~ 280 (426)
T 1sff_A 205 IEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-GFPLAGVT 280 (426)
T ss_dssp ECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-SSCCEEEE
T ss_pred EecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEE--EEcccccC-CCceEEEE
Confidence 754 456 997777 9999999999999999999998 3211 122223346765 77898887 7 69999
Q ss_pred EecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc---cCceEEeCCC
Q psy15216 210 IRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDM 286 (2602)
Q Consensus 210 ~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~g~~l~~~~ 286 (2602)
+++++++.+.+... ....+.+..+.+++.++|++... +...++..++++++.++|.+. ++.+....+.
T Consensus 281 ~~~~~~~~l~~~~~-------~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 351 (426)
T 1sff_A 281 GRAEVMDAVAPGGL-------GGTYAGNPIACVAALEVLKVFEQ--ENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGL 351 (426)
T ss_dssp EEHHHHTTSCTTSB-------CCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEE
T ss_pred EcHHHHhhhccCCc-------CcCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE
Confidence 99887776653211 11234567777777788886543 245667777788888877652 3333322111
Q ss_pred CCCCCceEEEEEcc---------cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCC
Q psy15216 287 NNRIPHNLNISFNF---------IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT 355 (2602)
Q Consensus 287 ~~~~~~~~~~~~~~---------~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t 355 (2602)
..++.+.+.. .+..++...| +||.++++..+ .+++||+++..++
T Consensus 352 ----g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~---------------------~~~iRi~~~~~~~ 406 (426)
T 1sff_A 352 ----GAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPY---------------------YNVLRILVPLTIE 406 (426)
T ss_dssp ----TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTT---------------------SCEEEECCCTTCC
T ss_pred ----EEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCC---------------------CCEEEEECCccCC
Confidence 2344555532 1234566655 79999877532 2789999998999
Q ss_pred HHHHHHHHHHHHhh
Q psy15216 356 EKEIDFTIKLLKMK 369 (2602)
Q Consensus 356 ~edid~li~~L~~~ 369 (2602)
++|+++++++|++.
T Consensus 407 ~~~i~~~~~~l~~~ 420 (426)
T 1sff_A 407 DAQIRQGLEIISQC 420 (426)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
No 436
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.77 E-value=2.7e-18 Score=225.51 Aligned_cols=313 Identities=14% Similarity=0.070 Sum_probs=213.3
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHh-CC-----CCCcEEE--eCCHHHHHHHHHHhh
Q psy15216 1403 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI-YA-----DPREIIW--TSGATESNNLAIKGA 1474 (2602)
Q Consensus 1403 ~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~-g~-----~~~~iv~--t~gaT~al~~al~~l 1474 (2602)
...++.+.+++.+.++.. ...+ .|. ......++|+++++++ +. ++++|++ |+|+++|+++++..+
T Consensus 47 ~~~~~~v~~a~~~~~~~~-~~~~--~y~----~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~ 119 (412)
T 1ajs_A 47 PWVLPVVRKVEQRIANNS-SLNH--EYL----PILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFL 119 (412)
T ss_dssp CCCCHHHHHHHHHHHTCT-TCCC--CCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHhhhCh-hhcc--CCC----CCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHH
Confidence 346678899988877321 0000 010 0112468899999998 54 6789999 999999999996533
Q ss_pred hhhhccCC-----CEEEEcCCCCcchHHHHHHHHhCCcE-EEEeccC--CCCCcChhHHHhhccC---CceEEEEecccc
Q psy15216 1475 AHFYKKRG-----KHIITVQTEHKSVLDSIRKLENDGFR-VTYLKPK--NNGLITLSQLEEKICS---DTILVSVMLVNN 1543 (2602)
Q Consensus 1475 ~~~~~~~g-----d~Vlv~~~~~~s~~~~~~~~~~~G~~-v~~v~~~--~~~~id~d~l~~~i~~---~t~lv~l~~~~n 1543 (2602)
. .+++| |+|+++.|+|+++...+... |++ ++.++.+ .++.+|++++++++++ +++++++++|+|
T Consensus 120 ~--~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~n 194 (412)
T 1ajs_A 120 A--RWYNGTNNKDTPVYVSSPTWENHNGVFTTA---GFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHN 194 (412)
T ss_dssp H--HHSSSSSCCCSCEEEEESCCTHHHHHHHHT---TCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCT
T ss_pred H--HhCcCcCCCCCeEEEcCCCcHHHHHHHHHc---CCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 2 12689 99999999999987666554 888 9888874 4567999999999874 778898999999
Q ss_pred ccccccC---hHHHHHHhhhcCCEEEEeccccc-Ccc-------ccc-CCC-CCccEEEEccccccCCCc--eEEEEE--
Q psy15216 1544 EIGVIQP---ILEIGELCRSKGVIFHCDAAQAV-GKI-------DIN-IQN-YKVDLMSFSAHKIYGPKG--IGALYI-- 1606 (2602)
Q Consensus 1544 ~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~-g~~-------~~~-l~~-~~~D~~v~S~~K~~gp~G--~G~l~~-- 1606 (2602)
|||.++| +++|.++|++||+++|+|++|.. +.. ++. +.. .+..+++.|+||.+|++| +||+++
T Consensus 195 ptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~ 274 (412)
T 1ajs_A 195 PTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVA 274 (412)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEec
Confidence 9999988 56899999999999999999652 221 111 211 123488899999999888 899999
Q ss_pred -ecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhhcCC---cE
Q psy15216 1607 -RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESIE---EI 1676 (2602)
Q Consensus 1607 -~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~------~~~~~~~~~~~~~l~~~l~~~L~~~~~---gl 1676 (2602)
+++.++.+...... ......++++...+.++.++|+.. ...+++.+++++++++++.+.|.+ .. ++
T Consensus 275 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~ 350 (412)
T 1ajs_A 275 KEPDSILRVLSQMQK---IVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEA-LKTPGTW 350 (412)
T ss_dssp SSHHHHHHHHHHHHH---HHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCSSCC
T ss_pred CCHHHHHHHHHHHHH---HHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCCe
Confidence 55422222111100 011222345666666777778733 345788889999999999999987 32 24
Q ss_pred EEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHH
Q psy15216 1677 YINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 1754 (2602)
Q Consensus 1677 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~ed 1754 (2602)
.+..+. ...+.+...+...+...+ +||.+++ .+|++++. .+.++
T Consensus 351 ~~~~~~------~~~~~~~~~~~~~~~~~l~~~gv~v~~---------------------------~~Ris~~~-~~~~~ 396 (412)
T 1ajs_A 351 NHITDQ------IGMFSFTGLNPKQVEYLINQKHIYLLP---------------------------SGRINMCG-LTTKN 396 (412)
T ss_dssp HHHHHC------CSSEEECCCCHHHHHHHHHTTCEECCT---------------------------TSEEEGGG-CCTTT
T ss_pred eEEcCC------CceEEEeCCCHHHHHHHHHhCCEEecC---------------------------CcEEEeee-CCHHH
Confidence 333221 112333333333333333 6888762 15999984 48899
Q ss_pred HHHHHHHHHHh
Q psy15216 1755 IDFTIKLLKMK 1765 (2602)
Q Consensus 1755 id~li~~L~~~ 1765 (2602)
+++++++|++.
T Consensus 397 i~~~~~~l~~~ 407 (412)
T 1ajs_A 397 LDYVATSIHEA 407 (412)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999873
No 437
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.77 E-value=4.2e-18 Score=226.81 Aligned_cols=301 Identities=17% Similarity=0.113 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCC-cccHHHHHHHHhCCcEEEEeccC
Q psy15216 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEH-KSVLDSIRKLENDGFRVTYLKPK 119 (2602)
Q Consensus 41 ~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~-~s~~~~~~~~~~~G~~v~~v~~~ 119 (2602)
....++|+++++++|.+ ++++++|+++|+++++.++. ++|| +++.++| +++...+.. .|++++.++++
T Consensus 75 ~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~al~~l~----~~gd--i~~~~~~~~~~~~~~~~---~G~~~~~v~~~ 143 (456)
T 2ez2_A 75 ENFYHLERTVQELFGFK--HIVPTHQGRGAENLLSQLAI----KPGQ--YVAGNMYFTTTRYHQEK---NGAVFVDIVRD 143 (456)
T ss_dssp HHHHHHHHHHHHHHCCS--EEEEESSHHHHHHHHHHHHC----CTTC--EEEESSCCHHHHHHHHH---TTCEEEECBCG
T ss_pred hhHHHHHHHHHHHhCCC--cEEEeCCcHHHHHHHHHHhC----CCCC--EeccccccchhHHHHHH---cCCEEEEeccc
Confidence 35678999999999965 89999999999999999986 7999 7778888 666555554 49999999876
Q ss_pred C----------CCccChHHHHhhccCCc----eEEEEecccC-ccccccc---HHHHHHHHHhcCCEEEEecccccc---
Q psy15216 120 N----------NGLITLSQLEEKICSDT----ILVSVMLVNN-EIGVIQP---ILEIGELCRSKGVIFHCDAAQAVG--- 178 (2602)
Q Consensus 120 ~----------~~~ld~e~l~~~i~~~t----klv~i~~~~n-pTG~~~~---l~~I~~la~~~g~~livD~a~a~g--- 178 (2602)
+ ++.+|+++|++++++++ ++|++++|+| |||.++| +++|.++|++||+++|+|++|+.|
T Consensus 144 ~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~ 223 (456)
T 2ez2_A 144 EAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAY 223 (456)
T ss_dssp GGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHH
T ss_pred ccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccc
Confidence 3 26789999999998766 8999999999 9999998 999999999999999999999875
Q ss_pred ------cccccCC--------CCCccEEEeccccccCCCCcEEEEE-ecCCCCcccceecCCCccccccccCcchhHHHH
Q psy15216 179 ------KIDINIQ--------NYKVDLMSFSAHKIYGPKGIGALYI-RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVG 243 (2602)
Q Consensus 179 ------~~~~dl~--------~~~~D~~~~S~~K~~Gp~G~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~a 243 (2602)
....+.. ....|++++|+||+++++..|+++. ++++++.+.+....+.. .. ..+..+...+.+
T Consensus 224 ~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~a 301 (456)
T 2ez2_A 224 FIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEG-MP-SYGGLAGRDMEA 301 (456)
T ss_dssp HHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSCEEEEESCHHHHHHHHHHHHHHTC-CT-TTTTCCHHHHHH
T ss_pred cccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCCceeEEEECCHHHHHHHHHHHhhccC-cc-cccCcchhHHHH
Confidence 1111110 1235888888999776433699988 45665555432211000 00 011222223322
Q ss_pred HHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEc----ccChhHH-----HHHh---
Q psy15216 244 MGEAFRLARIEM-KEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN----FIEGESL-----LMAI--- 310 (2602)
Q Consensus 244 l~~al~~~~~~~-~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~L--- 310 (2602)
+ ++... ..+ +...++..++.+++.+.|.+ .++.+..+.. .....+.+. ..+..++ ...|
T Consensus 302 ~--a~~~~-~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 373 (456)
T 2ez2_A 302 M--AIGLR-EAMQYEYIEHRVKQVRYLGDKLKA--AGVPIVEPVG---GHAVFLDARRFCEHLTQDEFPAQSLAASIYVE 373 (456)
T ss_dssp H--HHHHH-HHTCHHHHHHHHHHHHHHHHHHHH--TTCCBCSSCC---SSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHH
T ss_pred H--HHHHH-HHhHHHHHHHHHHHHHHHHHHHhc--CCCccccCCC---ceEEEEEhHHhcCCCChhhccHHHHHHHHHHh
Confidence 1 22222 223 46667777888889999877 3665554322 233333332 2334444 4444
Q ss_pred CCeEEcc-cccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCC-CCHHHHHHHHHHHHhh
Q psy15216 311 KDIAVSS-GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF-TTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 311 ~gI~v~~-g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~-~t~edid~li~~L~~~ 369 (2602)
+||.+.+ |..|.+. .+. .|.......+++||+++.+ ++++|+++++++|++.
T Consensus 374 ~gv~~~~~g~~~~~~--~~~-----~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~ 427 (456)
T 2ez2_A 374 TGVRSMERGIISAGR--NNV-----TGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKL 427 (456)
T ss_dssp HSEECEEESHHHHCB--CTT-----TCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCeeeeccccccccc--Ccc-----ccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 4887543 4433221 000 0111111237899999876 8999999999999864
No 438
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.77 E-value=1.3e-18 Score=228.10 Aligned_cols=277 Identities=11% Similarity=0.058 Sum_probs=198.7
Q ss_pred HHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHHHhc--------ccccccCCCEEEEcCCCCcccHHHHHHHHh
Q psy15216 43 IEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGA--------AHFYKKRGKHIITVQTEHKSVLDSIRKLEN 108 (2602)
Q Consensus 43 ~~~~r~~lA~~~g------~~~~~Iv~t~g~T~al~~~~~~l--------~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~ 108 (2602)
..++|+++|++++ +++++|++|+|+++|+++++.++ . ++||+|+++.|.|+++...++..
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~----~~Gd~Vlv~~P~y~~~~~~~~~~-- 175 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPD----APESKVVAHAPFYPVFREQTKYF-- 175 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTT----SCCEEEEECSSCCHHHHHHHHHS--
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccC----CCCCEEEEeCCCcccHHHHHHHc--
Confidence 4567888888775 57889999999999999999998 6 79999999999999987777655
Q ss_pred CCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCcccccccHHHHHHHHHhcCCEEEEeccccccccc-ccCCCC
Q psy15216 109 DGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKID-INIQNY 187 (2602)
Q Consensus 109 ~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~~~-~dl~~~ 187 (2602)
|++++. +.+|+++|++++++++++|++++||||||.+++ + +++ ++..+.|+++..+..+ ..+. .
T Consensus 176 -g~~~~~------~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s~~~~~-~ 240 (427)
T 2hox_A 176 -DKKGYV------WAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYTPIKYK-A 240 (427)
T ss_dssp -CBTTEE------EEEEGGGGTTCSCGGGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTSCCCSC-B
T ss_pred -CCeeee------ecCCHHHHHHhhcCCceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCCccccC-C
Confidence 766553 346889999999889999999999999999999 4 333 5678889876532211 2222 4
Q ss_pred CccEEEeccccccCCCC--cEEEEEe-cCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHH-----------H
Q psy15216 188 KVDLMSFSAHKIYGPKG--IGALYIR-RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLAR-----------I 253 (2602)
Q Consensus 188 ~~D~~~~S~~K~~Gp~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-----------~ 253 (2602)
+.+++++|+||.+|++| +||++++ +++++.+..... ....+++.....++..+|+... .
T Consensus 241 ~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~-------~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~ 313 (427)
T 2hox_A 241 DEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMT-------KNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRD 313 (427)
T ss_dssp CCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHH-------HHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTS
T ss_pred CceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHH-------hcCCCCCHHHHHHHHHHhhcchhhhccccchhHH
Confidence 57899999999999888 8999994 677666654331 1112344444444556665321 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCceEE--eC-CCC--------CCCCceEEEEEcccChhHHHHHh---CCeEEcccc
Q psy15216 254 EMKEELKRILFLQKRLYNGLMESIEEIYI--NG-DMN--------NRIPHNLNISFNFIEGESLLMAI---KDIAVSSGS 319 (2602)
Q Consensus 254 ~~~~~~~~~~~l~~~l~~~L~~~~~g~~l--~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~L---~gI~v~~g~ 319 (2602)
.+++.+++++++++++.+.|.+ .+++.+ +. +.. .....++++.++. +..++...+ +||.+++|.
T Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-~~~~~~~~ll~~~gI~v~pg~ 391 (427)
T 2hox_A 314 LNTFGFKKLRERWVNITALLDQ-SDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-EEDKDCYQTFQNGRINTQNGV 391 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-SSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS-GGGCSHHHHHHHTTEECEEGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CcCccccccccccccccccccCCCCceEEEEECCC-cHHHHHHHHHHHCCEEEcCCC
Confidence 3456778888899999999987 678775 22 210 1112333444443 333444443 699999998
Q ss_pred cCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 320 ACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.|.. ..+++|||++ +++++++.++++|++.
T Consensus 392 ~f~~------------------~~~~~Ris~~--~~~e~l~~~l~~l~~~ 421 (427)
T 2hox_A 392 GFEA------------------SSRYVRLSLI--KTQDDFDQLMYYLKDM 421 (427)
T ss_dssp GGTS------------------CTTEEEEECS--SCHHHHHHHHHHHHHH
T ss_pred ccCC------------------CCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 7742 1389999998 4889999999999863
No 439
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.77 E-value=1.3e-17 Score=218.79 Aligned_cols=308 Identities=15% Similarity=0.171 Sum_probs=211.6
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccc---
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--- 83 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~--- 83 (2602)
+..++.+.+++.+.+.... +... .+ ..+..+++++++++++| ++++++++|+++|+++++.++.....
T Consensus 72 G~~~p~v~~ai~~~~~~~~-~~~~-~~-----~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~~al~~~~~~~~~~~ 142 (420)
T 2pb2_A 72 GHCHPALVEALKSQGETLW-HTSN-VF-----TNEPALRLGRKLIDATF--AERVLFMNSGTEANETAFKLARHYACVRH 142 (420)
T ss_dssp CBTCHHHHHHHHHHHTTCC-CCCT-TS-----CCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhcc-cccC-cc-----CCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHHHHHHHHHHHhhhcc
Confidence 3468999999999886532 2111 11 23467889999999998 46899999999999999998761000
Q ss_pred cCC-CEEEEcCCCCcccHHHHHHHHhCCcE------------EEEeccCCCCccChHHHHhhccCCceEEEEecccCccc
Q psy15216 84 KRG-KHIITVQTEHKSVLDSIRKLENDGFR------------VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIG 150 (2602)
Q Consensus 84 ~~g-d~Vlv~~~~~~s~~~~~~~~~~~G~~------------v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG 150 (2602)
.+| ++|+++++.|++....+..+ .|.. +..++. .|+++|++++++++++|++++++|++|
T Consensus 143 ~~g~~~vi~~~~~yh~~~~~~~~~--~g~~~~~~~~~p~~~~~~~~~~-----~d~~~le~~i~~~~~~vi~~p~~~~gG 215 (420)
T 2pb2_A 143 SPFKTKIIAFHNAFHGRSLFTVSV--GGQPKYSDGFGPKPADIIHVPF-----NDLHAVKAVMDDHTCAVVVEPIQGEGG 215 (420)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHH--SSCHHHHTTSSSCCSCEEEECT-----TCHHHHHHHCCTTEEEEEECSEETTTT
T ss_pred CCCCCEEEEEeCCcCCcCHHHHHh--cCCccccccCCCCCCCeEEecC-----CCHHHHHHHhccCceEEEEeCCcCCCC
Confidence 056 59999999998764443322 1221 445543 389999999999999999999999888
Q ss_pred c----cccHHHHHHHHHhcCCEEEEecccc-cccc--c--ccCCCCCccEEEeccccccCCCC--cEEEEEecCCCCccc
Q psy15216 151 V----IQPILEIGELCRSKGVIFHCDAAQA-VGKI--D--INIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIE 219 (2602)
Q Consensus 151 ~----~~~l~~I~~la~~~g~~livD~a~a-~g~~--~--~dl~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l~ 219 (2602)
. ..++++|.++|++||+++|+|++|. ++.. . ++.....+|++ |++|.+| .| +|++++++++++.+.
T Consensus 216 ~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l~-~G~~iG~~~~~~~l~~~l~ 292 (420)
T 2pb2_A 216 VQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKALG-GGFPVSAMLTTQEIASAFH 292 (420)
T ss_dssp SEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TTSCCEEEEECHHHHTTCC
T ss_pred eecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--Eeccccc-CCCceEEEEEhHHHHHhhc
Confidence 6 2358899999999999999999995 2211 1 12223357877 5689766 34 899999987766665
Q ss_pred ceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc---cCceEEeCCCCCCCCceEEE
Q psy15216 220 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNI 296 (2602)
Q Consensus 220 ~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~g~~l~~~~~~~~~~~~~~ 296 (2602)
+...+ ...+.+..+.+++.++|+.... ++..++.+++++++.+.|.+. ++.+....+ ...++.+
T Consensus 293 ~~~~~-------~t~~~~~~~~aa~~a~L~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~g~~~~v 359 (420)
T 2pb2_A 293 VGSHG-------STYGGNPLACAVAGAAFDIINT--PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRG----MGLLIGA 359 (420)
T ss_dssp ----C-------CEECCCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE----ETTEEEE
T ss_pred CCCcC-------cccCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe----cceEEEE
Confidence 42111 1224566667777777875433 567778888888888888662 233332211 1234445
Q ss_pred EEccc---ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 297 SFNFI---EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 297 ~~~~~---~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++.. +..++...| +||.++++. .+++|++++...+++|+++++++|++.
T Consensus 360 ~~~~~~~~~~~~l~~~l~~~Gi~v~~~~-----------------------~~~iRl~~~~~~t~eei~~~~~~l~~~ 414 (420)
T 2pb2_A 360 ELKPKYKGRARDFLYAGAEAGVMVLNAG-----------------------ADVMRFAPSLVVEEADIHEGMQRFAQA 414 (420)
T ss_dssp EECGGGTTCHHHHHHHHHHTTEECEESS-----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EECCCchHHHHHHHHHHHHCCCEEEeCC-----------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 55432 355676666 799887642 278999998889999999999999864
No 440
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.77 E-value=1.5e-17 Score=221.51 Aligned_cols=352 Identities=16% Similarity=0.090 Sum_probs=220.9
Q ss_pred cHHHHHHHHHhcCCCccccceeeeeceeeeccC----CCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHH
Q psy15216 1368 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKD----ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKAR 1443 (2602)
Q Consensus 1368 ~~~~v~~aL~~~g~~~~~~ei~~iP~~~v~L~~----~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr 1443 (2602)
.+....+.|+..|..+.....+ ..|+|. +..+.++.+.+++... .. .|.. .....++|
T Consensus 20 ~~~~~~~~~~~~g~~~~~l~~~-----~~ylD~~~~~~~~~~~~~~~~a~~~~------~~---~y~~----~~~~~~l~ 81 (456)
T 2ez2_A 20 PRDERLKKMQEAGYNTFLLNSK-----DIYIDLLTDSGTNAMSDKQWAGMMMG------DE---AYAG----SENFYHLE 81 (456)
T ss_dssp CHHHHHHHHHHTTTCGGGSCGG-----GCSEECSCSSSCCCCCHHHHHHHTTC------CC---CSSS----CHHHHHHH
T ss_pred CHHHHHHHHHHCCCCcccCCcc-----cceeeeccccCCccCCHHHHHHhhcc------hh---hccc----ChhHHHHH
Confidence 3445556778888776554322 233332 1224456666665411 10 1111 23467899
Q ss_pred HHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCC-cchHHHHHHHHhCCcEEEEeccCC------
Q psy15216 1444 NEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEH-KSVLDSIRKLENDGFRVTYLKPKN------ 1516 (2602)
Q Consensus 1444 ~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~-~s~~~~~~~~~~~G~~v~~v~~~~------ 1516 (2602)
++++++++.+ ++++|+|+|+|++.++.++. ++|| +++.++| +++...+... |++++.+++++
T Consensus 82 ~~la~~~~~~--~~~~~~~gt~a~~~al~~l~----~~gd--i~~~~~~~~~~~~~~~~~---G~~~~~v~~~~~~~~~~ 150 (456)
T 2ez2_A 82 RTVQELFGFK--HIVPTHQGRGAENLLSQLAI----KPGQ--YVAGNMYFTTTRYHQEKN---GAVFVDIVRDEAHDAGL 150 (456)
T ss_dssp HHHHHHHCCS--EEEEESSHHHHHHHHHHHHC----CTTC--EEEESSCCHHHHHHHHHT---TCEEEECBCGGGGCTTC
T ss_pred HHHHHHhCCC--cEEEeCCcHHHHHHHHHHhC----CCCC--EeccccccchhHHHHHHc---CCEEEEecccccccccc
Confidence 9999999964 79999999999999999886 7999 7788888 7766555444 99999998763
Q ss_pred ----CCCcChhHHHhhccCCc----eEEEEecccc-ccccccC---hHHHHHHhhhcCCEEEEecccccC---------c
Q psy15216 1517 ----NGLITLSQLEEKICSDT----ILVSVMLVNN-EIGVIQP---ILEIGELCRSKGVIFHCDAAQAVG---------K 1575 (2602)
Q Consensus 1517 ----~~~id~d~l~~~i~~~t----~lv~l~~~~n-~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g---------~ 1575 (2602)
++.+|+++|+++++++| ++|++++|+| |||.++| +++|.++|++||+++|+|++|+.| .
T Consensus 151 ~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~ 230 (456)
T 2ez2_A 151 NIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQ 230 (456)
T ss_dssp CCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHST
T ss_pred cccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEcccccccccccccccc
Confidence 26789999999998766 8999999999 9999998 999999999999999999999875 1
Q ss_pred ccccCC--------CCCccEEEEccccccCCCceEEEEE-ecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHH
Q psy15216 1576 IDINIQ--------NYKVDLMSFSAHKIYGPKGIGALYI-RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL 1646 (2602)
Q Consensus 1576 ~~~~l~--------~~~~D~~v~S~~K~~gp~G~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~ 1646 (2602)
...+.. ....|++++|+||+++++.+|+++. ++++++.+......+.. . ...+..+...+.++ ++..
T Consensus 231 ~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~a~--a~~~ 306 (456)
T 2ez2_A 231 GFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEG-M-PSYGGLAGRDMEAM--AIGL 306 (456)
T ss_dssp TCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSCEEEEESCHHHHHHHHHHHHHHTC-C-TTTTTCCHHHHHHH--HHHH
T ss_pred ccCCcchhhhhhhhcccCCEEEEeCcccCCCCceeEEEECCHHHHHHHHHHHhhccC-c-ccccCcchhHHHHH--HHHH
Confidence 111111 1236888888999766432699988 45555554432211000 0 01122232233321 2222
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe----cCCcHHH-----HHhc---CCEEEcc
Q psy15216 1647 ARIEM-KEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN----FIEGESL-----LMAI---KDIAVSS 1713 (2602)
Q Consensus 1647 ~~~~~-~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~L---~gI~v~~ 1713 (2602)
. ..+ +...++...+.+++.+.|.+ .++.+..+.. .....+.+. ..+..++ ...| +||.+.+
T Consensus 307 ~-~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~ 380 (456)
T 2ez2_A 307 R-EAMQYEYIEHRVKQVRYLGDKLKA--AGVPIVEPVG---GHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSME 380 (456)
T ss_dssp H-HHTCHHHHHHHHHHHHHHHHHHHH--TTCCBCSSCC---SSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEE
T ss_pred H-HHhHHHHHHHHHHHHHHHHHHHhc--CCCccccCCC---ceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeec
Confidence 2 222 45666777788889999987 3665543321 222333331 2233444 4433 5887544
Q ss_pred -ccccCCCCCChhHHHHHcCCCccccCCeEEEecCCC-CCHHHHHHHHHHHHHh
Q psy15216 1714 -GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF-TTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1714 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~-~t~edid~li~~L~~~ 1765 (2602)
|..|.+. .+. ++.......+++||+++.+ ++.+++++++++|++.
T Consensus 381 ~g~~~~~~--~~~-----~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~ 427 (456)
T 2ez2_A 381 RGIISAGR--NNV-----TGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKL 427 (456)
T ss_dssp ESHHHHCB--CTT-----TCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cccccccc--Ccc-----ccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 4433211 000 0111111237899999987 8999999999999973
No 441
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.77 E-value=2.4e-18 Score=221.30 Aligned_cols=286 Identities=15% Similarity=0.122 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC--EEEEcCCCCcccHHHHHHHHhCCcEEEEecc
Q psy15216 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK--HIITVQTEHKSVLDSIRKLENDGFRVTYLKP 118 (2602)
Q Consensus 41 ~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd--~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~ 118 (2602)
+...++++++++++|.+ ..++++|+++|+.+++.++. .+|| +|+++.+.|++...........|++++.++.
T Consensus 47 ~~~~~l~~~la~~~~~~--~~i~~~~G~~a~~~al~~~~----~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 120 (357)
T 3lws_A 47 AIIEPFEQKFADVLGMD--DAVFFPSGTMAQQVALRIWS----DETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGA 120 (357)
T ss_dssp TTHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHH----HHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC
T ss_pred hHHHHHHHHHHHHhCCC--cEEEecCcHHHHHHHHHHHh----hcCCCcEEEecccceeeeeccchhhhccCcEEEEecC
Confidence 35678999999999974 34666888999999998887 6777 7888877776654322223345999999984
Q ss_pred CCCCccChHHHHhhccCCceEEEEecccCcc-ccccc---HHHHHHHHHhcCCEEEEecccccc------cccccCCCCC
Q psy15216 119 KNNGLITLSQLEEKICSDTILVSVMLVNNEI-GVIQP---ILEIGELCRSKGVIFHCDAAQAVG------KIDINIQNYK 188 (2602)
Q Consensus 119 ~~~~~ld~e~l~~~i~~~tklv~i~~~~npT-G~~~~---l~~I~~la~~~g~~livD~a~a~g------~~~~dl~~~~ 188 (2602)
+++.+|+++|+++. +++++++++|+||| |.++| +++|.++|++||+++|+|++|..+ ....++. ..
T Consensus 121 -~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~ 196 (357)
T 3lws_A 121 -ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA-GL 196 (357)
T ss_dssp -TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH-TT
T ss_pred -CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH-hc
Confidence 56779999999884 49999999999998 99887 888999999999999999998621 1111111 23
Q ss_pred ccEEEecccccc-CCCCcEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q psy15216 189 VDLMSFSAHKIY-GPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (2602)
Q Consensus 189 ~D~~~~S~~K~~-Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~ 267 (2602)
.|++++|+||.+ ||.| |+++.++++++.+.......+ ....+.+..+.+++ ++++. +. +..+++.++++
T Consensus 197 ~d~~~~s~sK~~~~~~g-g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~l~~---~~-~~~~~~~~~~~ 266 (357)
T 3lws_A 197 FDSIYISFYKGLGGIAG-AILAGPAAFCQTARIWKRRYG----GDLISLYPYIVSAD-YYYEL---RK-DRMGQYYEQAK 266 (357)
T ss_dssp SSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHHHTT----CCCSCCHHHHHHHH-HHHHH---HT-TCHHHHHHHHH
T ss_pred CCEEEEeccccCCCCce-EEEEcCHHHHHHHHHHHHHhc----CCcccchHHHHHHH-HHHHH---HH-HHHHHHHHHHH
Confidence 688899999976 7887 999998877766653221000 00111222222222 34432 22 22334567788
Q ss_pred HHHHHHhhccCceEEe-CCCCCCCCceEEEEEccc---ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccC
Q psy15216 268 RLYNGLMESIEEIYIN-GDMNNRIPHNLNISFNFI---EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDEL 341 (2602)
Q Consensus 268 ~l~~~L~~~~~g~~l~-~~~~~~~~~~~~~~~~~~---~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~ 341 (2602)
++.+.|.+ ++++++. .++. .+++.+.++.. +...+.+.| +||.+++|..+.++
T Consensus 267 ~l~~~L~~-~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~----------------- 325 (357)
T 3lws_A 267 QLAEQFNA-LPGVHTTPEVPV---SNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDG----------------- 325 (357)
T ss_dssp HHHHHHHT-STTEEEESSSCS---SSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSS-----------------
T ss_pred HHHHHHHh-CCCCeeccCCCc---ceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCC-----------------
Confidence 89999987 7899884 3332 23455555542 234555555 79999988543321
Q ss_pred CCCeEEEecCCC---CCHHHHHHHHHHHHh
Q psy15216 342 AHSSIRFTIGRF---TTEKEIDFTIKLLKM 368 (2602)
Q Consensus 342 ~~~~iRis~~~~---~t~edid~li~~L~~ 368 (2602)
..++|++++.. .+.++++.+++.|.+
T Consensus 326 -~~~~r~~i~~~~~~~~~~~l~~al~~l~~ 354 (357)
T 3lws_A 326 -YCSTEISVGDAYGELDQQTRDAGFARLRQ 354 (357)
T ss_dssp -EEEEEEEBCTTGGGSCHHHHHHHHHHHHH
T ss_pred -ceEEEEEecchhhhcCHHHHHHHHHHHHH
Confidence 25899998743 578889988888875
No 442
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.76 E-value=4.1e-17 Score=214.27 Aligned_cols=305 Identities=15% Similarity=0.126 Sum_probs=207.3
Q ss_pred CHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHhcccccccCCCE
Q psy15216 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (2602)
Q Consensus 10 p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~-~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~ 88 (2602)
++.+.+++.+.+.....+... .+ ..+...++++++++++|.+ +++|++++|+++|++.++.++.. -+||+
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~-~~-----~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~---~~~~~ 131 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKLAHAAAN-DF-----YNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKN---TGRKY 131 (419)
T ss_dssp CHHHHHHHHHHHTTSCCCSCS-CS-----CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHT---TSCCE
T ss_pred CHHHHHHHHHHHhhCcccccc-cc-----CCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHH---hhCCc
Confidence 799999999988653211100 01 1234577889999999987 78999999999999999987651 13899
Q ss_pred EEEcCCCCcccHHHHHHHH------hC-----CcEEEEeccCCCCc----------------cChHHHH-hhcc-----C
Q psy15216 89 IITVQTEHKSVLDSIRKLE------ND-----GFRVTYLKPKNNGL----------------ITLSQLE-EKIC-----S 135 (2602)
Q Consensus 89 Vlv~~~~~~s~~~~~~~~~------~~-----G~~v~~v~~~~~~~----------------ld~e~l~-~~i~-----~ 135 (2602)
|++++|.|++....+..+. +. +..++.++.+..+. +|+++|+ ++++ +
T Consensus 132 vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~ 211 (419)
T 2eo5_A 132 IIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPE 211 (419)
T ss_dssp EEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGG
T ss_pred EEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCC
Confidence 9999999886554443321 11 13567777654322 4688999 8886 3
Q ss_pred CceEEEEecccCccccccc----HHHHHHHHHhcCCEEEEecccc-ccccc----ccCCCCCccEEEeccccccCC--CC
Q psy15216 136 DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHKIYGP--KG 204 (2602)
Q Consensus 136 ~tklv~i~~~~npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~~----~dl~~~~~D~~~~S~~K~~Gp--~G 204 (2602)
++++++++.++|+||.+.+ +++|.++|++||+++|+|++|+ ++... ++.....+|++ |++|.+|+ -+
T Consensus 212 ~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~G~~r 289 (419)
T 2eo5_A 212 EVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGGGIMP 289 (419)
T ss_dssp GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTTTSC
T ss_pred CEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccCCccc
Confidence 5666666555577898777 9999999999999999999997 44221 22223456766 67796653 44
Q ss_pred cEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeC
Q psy15216 205 IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYING 284 (2602)
Q Consensus 205 ~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~ 284 (2602)
+|+++++++++ .+ +... ....+.+.++++++.++|+.... ..++.+++++++.+.|.+ + +....
T Consensus 290 iG~~~~~~~~~-~~-~~~~-------~~t~~~n~~~~~aa~aal~~~~~----~~~~~~~~~~~l~~~L~~-~--~~~~~ 353 (419)
T 2eo5_A 290 IGATIFRKDLD-FK-PGMH-------SNTFGGNALACAIGSKVIDIVKD----LLPHVNEIGKIFAEELQG-L--ADDVR 353 (419)
T ss_dssp CEEEEEEGGGC-CC--------------CCCCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHTT-S--SSEEE
T ss_pred eEEEEEchHhh-cC-Cccc-------CCCCCCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH-h--hhheE
Confidence 79999998876 55 2110 11234577777777788875432 778888999999999976 3 11111
Q ss_pred CCCCCCCceEEEEE-cc-cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHH
Q psy15216 285 DMNNRIPHNLNISF-NF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEID 360 (2602)
Q Consensus 285 ~~~~~~~~~~~~~~-~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid 360 (2602)
+ ...++.+.+ +. .... +...| +||.++++. .+++||+++..++++|++
T Consensus 354 ~----~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~-----------------------~~~lRis~~~~~t~e~i~ 405 (419)
T 2eo5_A 354 G----IGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG-----------------------RSAIRVIPPLVISEEEAK 405 (419)
T ss_dssp E----ETTEEEEECSCHHHHHH-HHHHHHHTTEECEEET-----------------------TTEEEECCCTTCCHHHHH
T ss_pred e----eeEEEEEEEecCccHHH-HHHHHHHCCCEEecCC-----------------------CCEEEEECCCCCCHHHHH
Confidence 1 123333444 21 1233 55555 799888642 178999999889999999
Q ss_pred HHHHHHHhh
Q psy15216 361 FTIKLLKMK 369 (2602)
Q Consensus 361 ~li~~L~~~ 369 (2602)
+++++|++.
T Consensus 406 ~~l~~l~~~ 414 (419)
T 2eo5_A 406 QGLDILKKV 414 (419)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999863
No 443
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.76 E-value=1e-17 Score=216.09 Aligned_cols=281 Identities=13% Similarity=0.079 Sum_probs=194.6
Q ss_pred HHHHHHHHHHhh-hcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHhcccccccCCCE
Q psy15216 12 RVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIW--TSGATESNNLAIKGAAHFYKKRGKH 88 (2602)
Q Consensus 12 ~v~~a~~~~l~~-~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~--t~g~T~al~~~~~~l~~~~~~~gd~ 88 (2602)
.|++++.++... ...++.. .|.++.. ..+++++.+|+++|++. .+++ ++|+++|+.+++.++. +|||+
T Consensus 33 ~vl~a~~~~~~~~~~~~~~~-~~~y~~~---~~~~Le~~lA~l~g~e~-alv~p~~~sGt~Ai~~al~all----~~GD~ 103 (409)
T 3jzl_A 33 KVLDAFQENKVSDFHFHPST-GYGYDDE---GRDTLERVYATVFKTEA-ALVRPQIISGTHAISTVLFGIL----RPDDE 103 (409)
T ss_dssp HHHHHHHHTTCCGGGGCCCC-TTCTTCH---HHHHHHHHHHHHHTCSE-EEEETTSCSHHHHHHHHHHHHC----CTTCE
T ss_pred HHHHHHHHhhhhhhccCCCc-CCCCChh---HHHHHHHHHHHHhCCCc-EEEECCCccHHHHHHHHHHHhc----CCCCE
Confidence 456666665422 1122322 3444433 36788999999999863 3443 8899999999999987 89999
Q ss_pred EEEcC-CCCcccHHHH-------HHHHhCCcEEEEeccCCCCccChHHHHhhccCCceEEEEec----ccCcccccccHH
Q psy15216 89 IITVQ-TEHKSVLDSI-------RKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVML----VNNEIGVIQPIL 156 (2602)
Q Consensus 89 Vlv~~-~~~~s~~~~~-------~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~----~~npTG~~~~l~ 156 (2602)
|+++. +.|+++...+ ..++..|++++.++.++++.+|+++++++++++|++|++++ |+||||.+.|++
T Consensus 104 Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~ 183 (409)
T 3jzl_A 104 LLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIK 183 (409)
T ss_dssp EEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHH
T ss_pred EEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHH
Confidence 99998 9999987655 34456699999999988899999999999999999999999 999999999999
Q ss_pred HHHHHHHh--cCCEEEEecccccccccccCCCCCccEEEeccccccCCCC---cEEEEEecCCCCcccceecCCCccccc
Q psy15216 157 EIGELCRS--KGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGL 231 (2602)
Q Consensus 157 ~I~~la~~--~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~G---~G~l~~~~~~~~~l~~~~~g~~~~~~~ 231 (2602)
+|+++||+ ||+++++|++|+.+....+...+++|++++|+||.+|+.| .|+++.++++++.+.......+. ..
T Consensus 184 ~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~--g~ 261 (409)
T 3jzl_A 184 EMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGI--GR 261 (409)
T ss_dssp HHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTT--GG
T ss_pred HHHHHHHhhCCCCEEEEeCCcccccccCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccc--cc
Confidence 99999999 9999999999987763333445678999999999776543 49999998887777542211000 01
Q ss_pred cccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCC-CCCceEEEEEccc-ChhHHHHH
Q psy15216 232 RSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN-RIPHNLNISFNFI-EGESLLMA 309 (2602)
Q Consensus 232 ~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~-~~~~~~~~~~~~~-~~~~~~~~ 309 (2602)
..+ +......++..+++. .....++..+++.++.+.|.+ .++.+++.+++ +...+..+.+... ....+.+.
T Consensus 262 ~~g-~~~~~~~~~l~gl~~----~~~r~~~~~~~a~~la~~L~~--~g~~v~p~~~~~~~~~i~~i~l~~~~~~~~~~~~ 334 (409)
T 3jzl_A 262 EAG-ASLYSLLEMYQGFFL----APHVTAQAIKGARFTAAMLAE--FGVEADPVWDAPRTDLIQSVSFHNKEKMVAFAQA 334 (409)
T ss_dssp GCC-CCTTCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH--TTCEEESCTTSCCSSSCCEEECSCHHHHHHHHHH
T ss_pred ccc-ccHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHh--CCCcccCCCCCCCccEEEEEEeCCHHHHHHHHHH
Confidence 111 111112223333332 345666778888889999987 35666543222 2222444444321 22345555
Q ss_pred h
Q psy15216 310 I 310 (2602)
Q Consensus 310 L 310 (2602)
|
T Consensus 335 L 335 (409)
T 3jzl_A 335 I 335 (409)
T ss_dssp H
T ss_pred H
Confidence 5
No 444
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.76 E-value=9.5e-18 Score=216.67 Aligned_cols=256 Identities=14% Similarity=0.056 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHh-hhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHhcccccccCCC
Q psy15216 11 PRVVDKMIPYLR-VQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIW--TSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 11 ~~v~~a~~~~l~-~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~--t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
+.|++++.++.. ....++. ..|.++.. ..+++++.+|+++|++.. +++ ++|+++|+.+++.++. +|||
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~-~gy~y~~~---~~~~Le~~lA~l~g~e~a-lv~p~~~sGt~Ai~~al~all----~pGD 116 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNS-SGYGYGDI---GRDSLDAVYARVFNTESA-LVRPHFVNGTHALGAALFGNL----RPGN 116 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCC-CTTCTTCH---HHHHHHHHHHHHHTCSEE-EEETTCCSHHHHHHHHHHHHC----CTTC
T ss_pred HHHHHHHHHhchhHHhcCCC-CCCCCCHH---HHHHHHHHHHHHhCCcce-EEeCCCccHHHHHHHHHHHHh----CCCC
Confidence 346666665431 1122222 23444433 377889999999998633 554 8889999999999987 8999
Q ss_pred EEEEcC-CCCcccHHHH--------HHHHhCCcEEEEeccCCCCccChHHHHhhcc--CCceEEEEec----ccCccccc
Q psy15216 88 HIITVQ-TEHKSVLDSI--------RKLENDGFRVTYLKPKNNGLITLSQLEEKIC--SDTILVSVML----VNNEIGVI 152 (2602)
Q Consensus 88 ~Vlv~~-~~~~s~~~~~--------~~~~~~G~~v~~v~~~~~~~ld~e~l~~~i~--~~tklv~i~~----~~npTG~~ 152 (2602)
+|++++ +.|+++...+ ..+...|++++.++.++++.+|+++++++++ ++|++|++++ |+||||.+
T Consensus 117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i 196 (427)
T 3i16_A 117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLI 196 (427)
T ss_dssp EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCH
T ss_pred EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccH
Confidence 999998 9999887655 4445669999999998888999999999998 8999999999 99999999
Q ss_pred ccHHHHHHHHHh--cCCEEEEecccccccccccCCCCCccEEEeccccccCCC---CcEEEEEecCCCCcccceecCCCc
Q psy15216 153 QPILEIGELCRS--KGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPK---GIGALYIRRNPRTRIEAQIHGGGH 227 (2602)
Q Consensus 153 ~~l~~I~~la~~--~g~~livD~a~a~g~~~~dl~~~~~D~~~~S~~K~~Gp~---G~G~l~~~~~~~~~l~~~~~g~~~ 227 (2602)
.|+++|+++|++ +|+++++|++|+.+........+++|++++|+||.+|+. ..|+++++++++++++......
T Consensus 197 ~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~-- 274 (427)
T 3i16_A 197 EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVP-- 274 (427)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCT--
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCccccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccC--
Confidence 999999999999 999999999998776333333467899999999977753 3599999988887776532110
Q ss_pred ccccccc-CcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCC
Q psy15216 228 EYGLRSG-TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGD 285 (2602)
Q Consensus 228 ~~~~~~g-t~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~ 285 (2602)
.+... .+.......+..+++ ......++..+++.++.+.|.+ .++.+++.
T Consensus 275 --~~g~~~~~~~~~a~~~l~gl~----~~~~r~~~~~~~a~~la~~L~~--~g~~V~p~ 325 (427)
T 3i16_A 275 --GIGGECGSTFGVVRSMYQGLF----LAPHISMEALKGAILCSRIMEL--AGFEVMPK 325 (427)
T ss_dssp --TTGGGCCCCTTCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH--TTCEEESC
T ss_pred --ccCccCCccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHh--CCCeecCC
Confidence 00000 111211222223332 2346667778888888888877 35566543
No 445
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.76 E-value=8.2e-18 Score=226.03 Aligned_cols=286 Identities=12% Similarity=0.032 Sum_probs=187.6
Q ss_pred CCcEEEeCCHHHHHHHHHHhccc-ccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCC--CCccChHHHHhhcc
Q psy15216 58 PREIIWTSGATESNNLAIKGAAH-FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKIC 134 (2602)
Q Consensus 58 ~~~Iv~t~g~T~al~~~~~~l~~-~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~ld~e~l~~~i~ 134 (2602)
+++|++|+|+++|+.+++.++.. .+.++||.|++++|.|+.+...+.. ...|++++.++.++ ++.+|+++|+++++
T Consensus 165 ~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~ 243 (546)
T 2zy4_A 165 SVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPEL-AQYALEEVAINADPSLNWQYPDSELDKLKD 243 (546)
T ss_dssp GEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHS-TTSCCEEEEEECBGGGTTBCCHHHHGGGGS
T ss_pred cceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHH-cCCCcEEEEEecCcccCCCCCHHHHHHhhC
Confidence 57899999999999999988410 0137999999999999998766543 34578999998765 35689999999998
Q ss_pred CCceEEEEecccCcccccccH---HHHHHHH--HhcCCEEEEecccccccc-cccCCC--CCccEEEeccccccCCCC--
Q psy15216 135 SDTILVSVMLVNNEIGVIQPI---LEIGELC--RSKGVIFHCDAAQAVGKI-DINIQN--YKVDLMSFSAHKIYGPKG-- 204 (2602)
Q Consensus 135 ~~tklv~i~~~~npTG~~~~l---~~I~~la--~~~g~~livD~a~a~g~~-~~dl~~--~~~D~~~~S~~K~~Gp~G-- 204 (2602)
++++++++++|+||||.+++. ++|.++| +++|+++|+|++|+.... +..+.. .+.++++.|+||.+|++|
T Consensus 244 ~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~GlR 323 (546)
T 2zy4_A 244 PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGWR 323 (546)
T ss_dssp TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGGC
T ss_pred CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCcc
Confidence 899999999999999999984 5577888 789999999999974332 111111 135688999999999888
Q ss_pred cEEEEEecC-CCCcccc------------eecCCCc-cc----------------cccccCcchhHHHHHH-HHH-HHH-
Q psy15216 205 IGALYIRRN-PRTRIEA------------QIHGGGH-EY----------------GLRSGTLATHQIVGMG-EAF-RLA- 251 (2602)
Q Consensus 205 ~G~l~~~~~-~~~~l~~------------~~~g~~~-~~----------------~~~~gt~~~~~~~al~-~al-~~~- 251 (2602)
+||++++++ +++.+.. .+..+.. +. .....+.+.+...++. .++ .+.
T Consensus 324 iG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~ 403 (546)
T 2zy4_A 324 LGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMD 403 (546)
T ss_dssp EEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHC
T ss_pred eEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHh
Confidence 799999885 5444421 0000000 00 0111233333333321 111 222
Q ss_pred --HHhHHHHHHHHHHHHHHHHHHHhhccCceEEeCCCCCCCCceEEEEEcc-----------------cChhHH-HHHh-
Q psy15216 252 --RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-----------------IEGESL-LMAI- 310 (2602)
Q Consensus 252 --~~~~~~~~~~~~~l~~~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~-----------------~~~~~~-~~~L- 310 (2602)
..+.++.++.++++++.+.+.|. . ++....+ . ....+.+.++. .+..++ ...+
T Consensus 404 ~~~~~~~~~r~~~~~r~~~l~~~L~--~-~~~~~~~-~--~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~ 477 (546)
T 2zy4_A 404 EADEYKHTLKQLIRRRETTLYRELG--M-PPLRDEN-A--VDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIAD 477 (546)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHGGGT--S-SCCCCTT-B--CCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcC--C-CcccCCC-C--eeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHH
Confidence 23456667777777777777763 1 2221111 1 11222333321 112232 3333
Q ss_pred -CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 311 -KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 311 -~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+||.+.+|..|..+ .+++||+++ ..+++++++++++|++.
T Consensus 478 ~~gV~v~pG~~F~~~------------------~~~iRis~~-~~~~e~i~~~~~~l~~~ 518 (546)
T 2zy4_A 478 ETGIVLLPGRGFGSN------------------RPSGRASLA-NLNEYEYAAIGRALRKM 518 (546)
T ss_dssp HHSCCCEESSCTTCS------------------SCEEEEESS-SSCHHHHHHHHHHHHHH
T ss_pred HCCEEEeCccccCCC------------------CCeEEEEec-cCCHHHHHHHHHHHHHH
Confidence 69999999877542 378999997 45789999999999964
No 446
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.76 E-value=1.3e-17 Score=218.75 Aligned_cols=307 Identities=14% Similarity=0.132 Sum_probs=211.2
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhh---ccC
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY---KKR 1481 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~---~~~ 1481 (2602)
.++.+.+++.+.+.....++.. + ......+++++++++++.+ ++++|+|+|+|++.++.++.... -++
T Consensus 56 ~~p~v~~a~~~~~~~~~~~~~~--~-----~~~~~~~l~~~la~~~~~~--~v~~~~gg~~a~~~al~~~~~~~~~~~~~ 126 (406)
T 4adb_A 56 AHPELREALNEQASKFWHTGNG--Y-----TNEPVLRLAKKLIDATFAD--RVFFCNSGAEANEAALKLARKFAHDRYGS 126 (406)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTT--S-----CCHHHHHHHHHHHHHSSCS--EEEEESSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCHHHHHHHHHHHHhcccccCC--c-----CCHHHHHHHHHHHhhCCCC--eEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 4788999999988764322211 1 1234678999999999854 89999999999999999875100 005
Q ss_pred C-CEEEEcCCCCcchHHHHHHHHhC----------CcEEEEeccCCCCCcChhHHHhhccCCceEEEEecccccccccc-
Q psy15216 1482 G-KHIITVQTEHKSVLDSIRKLEND----------GFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQ- 1549 (2602)
Q Consensus 1482 g-d~Vlv~~~~~~s~~~~~~~~~~~----------G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~- 1549 (2602)
| |+|+++++.|+++......+... +..+..++. .|+++|++++++++++|+++ |+||+|.++
T Consensus 127 g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~-p~np~g~~~~ 200 (406)
T 4adb_A 127 HKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALIDDSTCAVIVE-PIQGEGGVVP 200 (406)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCSTTEEEEEEC-SEETTTTSEE
T ss_pred CCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhcCCeEEEEEe-CCcCCCCCcc
Confidence 5 99999999999986555544211 023333332 48999999999999999999 899999776
Q ss_pred ----ChHHHHHHhhhcCCEEEEecccc-cCcc----cccCCCCCccEEEEccccccCCCc--eEEEEEecCCCCcccccc
Q psy15216 1550 ----PILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQI 1618 (2602)
Q Consensus 1550 ----~l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~ 1618 (2602)
++++|.++|++||+++|+|++|+ ++.. ..+.....+|++ ++||.++ +| +|++++++++++.+.+..
T Consensus 201 ~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G~r~G~~~~~~~~~~~~~~~~ 277 (406)
T 4adb_A 201 ASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG-GGFPVGALLATEECARVMTVGT 277 (406)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TTSCCEEEEECHHHHHTCCTTS
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc-CCCCeEEEEEcHHHHhhhccCC
Confidence 48999999999999999999996 3211 112223346777 4689766 45 899999987766665432
Q ss_pred ccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CcEEEeCCCCCCCCceEEEEEe
Q psy15216 1619 HGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESI---EEIYINGDMNNRIPHNLNISFN 1695 (2602)
Q Consensus 1619 ~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~---~gl~i~~~~~~~~~~~~~~~~~ 1695 (2602)
.+ ...+.+...+.++.++++.... ++..++++++++++.+.|.+.. +.+.-.. ..+....+.++
T Consensus 278 ~~-------~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~----~~g~~~~~~~~ 344 (406)
T 4adb_A 278 HG-------TTYGGNPLASAVAGKVLELINT--PEMLNGVKQRHDWFVERLNTINHRYGLFSEVR----GLGLLIGCVLN 344 (406)
T ss_dssp SC-------CSSTTCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE----EETTEEEEEEC
T ss_pred cC-------CCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE----EEEEEEEEEEe
Confidence 11 1224556666666677765432 5677778888888888887621 1111110 01234444554
Q ss_pred cC---CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1696 FI---EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1696 ~~---~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.. +..++...| +||.++++. .+++|++++..+|.+++++++++|++.
T Consensus 345 ~~~~~~~~~~~~~l~~~gi~v~~~~-----------------------~~~iRi~~~~~~~~e~i~~~~~~l~~~ 396 (406)
T 4adb_A 345 ADYAGQAKQISQEAAKAGVMVLIAG-----------------------GNVVRFAPALNVSEEEVTTGLDRFAAA 396 (406)
T ss_dssp TTTTTCHHHHHHHHHHTTEECEESS-----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCcEEeecC-----------------------CCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 32 355666666 799987643 178999999999999999999999973
No 447
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.76 E-value=4.8e-17 Score=212.40 Aligned_cols=305 Identities=17% Similarity=0.168 Sum_probs=209.1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhc--cC-
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--KR- 1481 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~--~~- 1481 (2602)
.++.+.+++.+.++.. .++.. .+ ......++++++++++| ++++++++|+++|+..++.++..... ++
T Consensus 57 ~~~~v~~a~~~~~~~~-~~~~~-~~-----~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~ 127 (397)
T 2ord_A 57 SHPRLVEAIKDQAEKL-IHCSN-LF-----WNRPQMELAELLSKNTF--GGKVFFANTGTEANEAAIKIARKYGKKKSEK 127 (397)
T ss_dssp TCHHHHHHHHHHHHHC-SCCCT-TS-----EEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHhc-ccCcc-cc-----CCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHHHHHHHHhhcCCCC
Confidence 5788999999988763 22221 11 12457889999999998 46899999999999999988751000 04
Q ss_pred CCEEEEcCCCCcch-HHHHHHHHhCCcE------------EEEeccCCCCCcChhHHHhhccCCceEEEEecccccccc-
Q psy15216 1482 GKHIITVQTEHKSV-LDSIRKLENDGFR------------VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGV- 1547 (2602)
Q Consensus 1482 gd~Vlv~~~~~~s~-~~~~~~~~~~G~~------------v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~- 1547 (2602)
+++|+++++.|++. ..++... |.+ +..++. .|+++|++++++++++|++++++||||.
T Consensus 128 ~~~vi~~~~~yh~~~~~~~~~~---g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~~~~nptG~~ 199 (397)
T 2ord_A 128 KYRILSAHNSFHGRTLGSLTAT---GQPKYQKPFEPLVPGFEYFEF-----NNVEDLRRKMSEDVCAVFLEPIQGESGIV 199 (397)
T ss_dssp CCEEEEEBTCCCCSSHHHHHHS---BCHHHHGGGCSCCTTEEEECT-----TCHHHHHHHCCTTEEEEEECSEECTTTCE
T ss_pred CceEEEEcCCcCCCchhhhhcc---CChhhccccCCCCCCeeEecC-----CCHHHHHHHhhcCeEEEEEecccCCCCcc
Confidence 47899888888654 3344433 443 556654 2899999999999999999999999999
Q ss_pred cc---ChHHHHHHhhhcCCEEEEecccc-cCcc--cccCC--CCCccEEEEccccccCC-CceEEEEEecCCCCcccccc
Q psy15216 1548 IQ---PILEIGELCRSKGVIFHCDAAQA-VGKI--DINIQ--NYKVDLMSFSAHKIYGP-KGIGALYIRRNPRTRIEAQI 1618 (2602)
Q Consensus 1548 ~~---~l~~I~~ia~~~gi~vivD~a~~-~g~~--~~~l~--~~~~D~~v~S~~K~~gp-~G~G~l~~~~~~~~~l~~~~ 1618 (2602)
++ ++++|.++|++||+++|+|++|+ ++.. +..+. ...+|++ |++|.+++ .++|+++++++++ .+.+..
T Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~r~G~~~~~~~~~-~l~~~~ 276 (397)
T 2ord_A 200 PATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLGGGVPIGAVIVNERAN-VLEPGD 276 (397)
T ss_dssp ECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEEEEECSTTC-CCCTTS
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccCCCcCeEEEEEchHhc-ccCCCC
Confidence 44 48899999999999999999997 2211 11111 1236766 66896652 2389999998876 554311
Q ss_pred ccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCcEEEeCCCCCCCCceEEEEEe
Q psy15216 1619 HGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNISFN 1695 (2602)
Q Consensus 1619 ~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~gl~i~~~~~~~~~~~~~~~~~ 1695 (2602)
.....+.+...+.++.++|+.... ++..++.+++++++.+.|.+. ++.+....+ ...+..+.++
T Consensus 277 -------~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~g~~~~~~~~ 343 (397)
T 2ord_A 277 -------HGTTFGGNPLACRAGVTVIKELTK--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRG----MGLMIGIQFR 343 (397)
T ss_dssp -------SCCSSTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE----ETTEEEEEEC
T ss_pred -------cCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEE----EeEEEEEEEC
Confidence 111224566666767677775433 456778888888888888762 233221111 1233444554
Q ss_pred c-CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1696 F-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1696 ~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
. .+..++...| +||.++++. + +++|++++..++.+++++++++|++.
T Consensus 344 ~~~~~~~l~~~l~~~gi~v~~~~----~-------------------~~iRis~~~~~~~e~i~~~~~~l~~~ 393 (397)
T 2ord_A 344 EEVSNREVATKCFENKLLVVPAG----N-------------------NTIRFLPPLTVEYGEIDLAVETLKKV 393 (397)
T ss_dssp TTSCHHHHHHHHHHTTEECEEET----T-------------------TEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHCCCEEccCC----C-------------------CEEEEECCcCCCHHHHHHHHHHHHHH
Confidence 3 2355666665 799988652 1 68999998889999999999999873
No 448
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.76 E-value=6.9e-18 Score=217.22 Aligned_cols=289 Identities=16% Similarity=0.154 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCE--EEEcCCCCcccHHHHHHHHhCCcEEEEecc
Q psy15216 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH--IITVQTEHKSVLDSIRKLENDGFRVTYLKP 118 (2602)
Q Consensus 41 ~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~--Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~ 118 (2602)
+..+++++++++++|.+. .++++|+++|+.+++.++. .+||. |+++.+.|++...........|++++.++.
T Consensus 48 ~~~~~l~~~la~~~~~~~--~i~~~~g~~a~~~a~~~~~----~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 121 (359)
T 3pj0_A 48 AVIEDFETKIAKILGKQS--AVFFPSGTMAQQIALRIWA----DRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT 121 (359)
T ss_dssp HHHHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHH----HHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC
T ss_pred HHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHH----hcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC
Confidence 467899999999999863 3666889999999999887 67776 666655554432211111223999999986
Q ss_pred CCCCccChHHHHhhccCCceEEEEecccCcc-cccccHHHH---HHHHHhcCCEEEEecccccccc------cccCCCCC
Q psy15216 119 KNNGLITLSQLEEKICSDTILVSVMLVNNEI-GVIQPILEI---GELCRSKGVIFHCDAAQAVGKI------DINIQNYK 188 (2602)
Q Consensus 119 ~~~~~ld~e~l~~~i~~~tklv~i~~~~npT-G~~~~l~~I---~~la~~~g~~livD~a~a~g~~------~~dl~~~~ 188 (2602)
+++.+|+++|+++ .+++++|++++|+||+ |.++|.++| .++|++||+++|+|++|..+.. +.++. .+
T Consensus 122 -~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~ 198 (359)
T 3pj0_A 122 -ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC-AL 198 (359)
T ss_dssp -TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH-TT
T ss_pred -cCCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh-cc
Confidence 5678999999999 8899999999999998 799986665 9999999999999999865432 11121 35
Q ss_pred ccEEEecccccc-CCCCcEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q psy15216 189 VDLMSFSAHKIY-GPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (2602)
Q Consensus 189 ~D~~~~S~~K~~-Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~ 267 (2602)
.|+++.|+||.+ +|.| |+++.++++++.+.......+ ....+.+....+++ .+++. .. +..++..++++
T Consensus 199 ~d~~~~s~sK~~~~~~g-g~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~a~~-~~l~~---~~-~~~~~~~~~~~ 268 (359)
T 3pj0_A 199 FDSVYVSFYKGIGGIAG-AILAGNDDFVQEAKIWKRRYG----GDLISLYPYILSAD-YYFEK---RI-GKMAEYFEAAK 268 (359)
T ss_dssp CSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHHHTT----CCCSCCHHHHHHHH-HHHHH---HG-GGHHHHHHHHH
T ss_pred CCEEEEeccccCCCcce-EEEECCHHHHHHHHHHHHHhC----CCcchhHHHHHHHH-HHHHH---HH-HHhHHHHHHHH
Confidence 689999999955 4555 888888877776654221000 00111222222222 33332 22 33445677888
Q ss_pred HHHHHHhhccCceEEeCCCCCCCCceEEEEEccc---ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCC
Q psy15216 268 RLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI---EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELA 342 (2602)
Q Consensus 268 ~l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~ 342 (2602)
++.+.|.+ ++++++...+. ..++..+.++.. +...+.+.| +||.+++|..+..+ .
T Consensus 269 ~l~~~L~~-~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~-----------------~ 328 (359)
T 3pj0_A 269 GLAERFNS-CSGVKTVPEVP--VSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSA-----------------D 328 (359)
T ss_dssp HHHHHHHT-STTEEEESSSC--SSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEET-----------------T
T ss_pred HHHHHHhh-CCCceeeccCC--cceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCC-----------------C
Confidence 99999987 78998853222 134455666532 244555555 79999988654321 1
Q ss_pred CCeEEEecCC---CCCHHHHHHHHHHHHh
Q psy15216 343 HSSIRFTIGR---FTTEKEIDFTIKLLKM 368 (2602)
Q Consensus 343 ~~~iRis~~~---~~t~edid~li~~L~~ 368 (2602)
.+++|++++. ..+.++++.+++.|.+
T Consensus 329 ~~~~r~~i~~~~~~~~~e~l~~~l~~l~~ 357 (359)
T 3pj0_A 329 VCAFEVSVGDAFAEIPAKNLELVFRCLEK 357 (359)
T ss_dssp EEEEEEECCTTGGGSCHHHHHHHHHHHHH
T ss_pred ceEEEEEecCccccCCHHHHHHHHHHHHh
Confidence 2689998863 3578899999888875
No 449
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.75 E-value=2.3e-17 Score=215.20 Aligned_cols=309 Identities=17% Similarity=0.186 Sum_probs=210.7
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccc---cC
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK---KR 85 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~---~~ 85 (2602)
.+|.+.+++.+.+........ ....+..+++++++++++| ++++++++|+++|+..++.++..... .+
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~-------~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~ 123 (395)
T 3nx3_A 53 NHAKFNAKIKAQVDKLLHTSN-------LYYNENIAAAAKNLAKASA--LERVFFTNSGTESIEGAMKTARKYAFNKGVK 123 (395)
T ss_dssp SCHHHHHHHHHHHTTCSCCCT-------TSBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHhcccccc-------ccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHHHHHHHHhhccCCC
Confidence 589999999998865321111 1123467889999999998 56999999999999999987752100 25
Q ss_pred CCEEEEcCCCCcccHHHHHHHH----------hCCcEEEEeccCCCCccChHHHHhhccCCceEEEEecccCccccccc-
Q psy15216 86 GKHIITVQTEHKSVLDSIRKLE----------NDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP- 154 (2602)
Q Consensus 86 gd~Vlv~~~~~~s~~~~~~~~~----------~~G~~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~~~npTG~~~~- 154 (2602)
+++|++.++.|+++......+. ..+..+..++.+ |+++|++++++++++|++.+++|++|.+.|
T Consensus 124 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~v~~~~~~~~~G~~~~~ 198 (395)
T 3nx3_A 124 GGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN-----DISSVEKLVNEKTCAIILESVQGEGGINPAN 198 (395)
T ss_dssp TCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-----CHHHHHTTCCTTEEEEEEESEECTTSCEECC
T ss_pred CCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-----CHHHHHHhccCCeEEEEEeCccCCCCcccCC
Confidence 7999999999988654433220 112345555432 799999999999999999999999999988
Q ss_pred ---HHHHHHHHHhcCCEEEEecccc-ccccc----ccCCCCCccEEEeccccccCC-CCcEEEEEecCC-CCcccceecC
Q psy15216 155 ---ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHKIYGP-KGIGALYIRRNP-RTRIEAQIHG 224 (2602)
Q Consensus 155 ---l~~I~~la~~~g~~livD~a~a-~g~~~----~dl~~~~~D~~~~S~~K~~Gp-~G~G~l~~~~~~-~~~l~~~~~g 224 (2602)
+++|.++|++||+++|+|++|+ +|... .+.....+|++ +++|.+|+ .++|++++++++ ++.+.+...+
T Consensus 199 ~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~ 276 (395)
T 3nx3_A 199 KDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIM--TSAKALGCGLSVGAFVINQKVASNSLEAGDHG 276 (395)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGTTTSCCEEEEECHHHHHHHSCTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEE--EecccccCCCceEEEEEchhhhhhhcCCcccC
Confidence 9999999999999999999987 43221 12222345666 45695543 348999999887 6666543221
Q ss_pred CCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh---ccCceEEeCCCCCCCCceEEEEEccc
Q psy15216 225 GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME---SIEEIYINGDMNNRIPHNLNISFNFI 301 (2602)
Q Consensus 225 ~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~---~~~g~~l~~~~~~~~~~~~~~~~~~~ 301 (2602)
...+.+..+.++..++++.... ++..++.+++.+++++.|.+ ..+.+....+ ...++.+.++..
T Consensus 277 -------~~~~~~~~~~~aa~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~g~~~~~~~~~~ 343 (395)
T 3nx3_A 277 -------STYGGNPLVCAGVNAVFEIFKE--EKILENVNKLTPYLEQSLDELINEFDFCKKRKG----LGFMQGLSLDKS 343 (395)
T ss_dssp -------SCBSCCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE----ETTEEEEEECTT
T ss_pred -------CCCCCCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe----EEEEEEEEeCCc
Confidence 1234566777777778875432 23444455555555555543 1344433321 123445555543
Q ss_pred -ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 302 -EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 302 -~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+...+...| +||.++++. .+++||+++...|++|+++++++|++.
T Consensus 344 ~~~~~~~~~l~~~Gi~v~~~~-----------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~ 391 (395)
T 3nx3_A 344 VKVAKVIQKCQENALLLISCG-----------------------ENDLRFLPPLILQKEHIDEMSEKLRKA 391 (395)
T ss_dssp SCHHHHHHHHHHTTEECEEET-----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHCCCEEecCC-----------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 456666666 799887652 278999999899999999999999864
No 450
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.75 E-value=2.1e-17 Score=213.82 Aligned_cols=299 Identities=13% Similarity=0.074 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHH--HHhCCcEEEEec
Q psy15216 1436 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK--LENDGFRVTYLK 1513 (2602)
Q Consensus 1436 ~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~--~~~~G~~v~~v~ 1513 (2602)
.....++++++++++|.+ ++++++|+++|+.. +.++. ++||+|+++++.|++....+.. +...|+++++++
T Consensus 66 ~p~~~~l~~~la~l~g~~--~~~~~~sG~~Ai~~-~~~l~----~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 138 (400)
T 3nmy_A 66 NPTRFAYERCVAALEGGT--RAFAFASGMAATST-VMELL----DAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD 138 (400)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHH-HHTTS----CTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred CHHHHHHHHHHHHHhCCC--CEEEecCHHHHHHH-HHHHc----CCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence 345788999999999965 67778888999987 45554 7999999999999976655433 344599999998
Q ss_pred cCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcccccCCCCCccEEEEccc
Q psy15216 1514 PKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAH 1593 (2602)
Q Consensus 1514 ~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~ 1593 (2602)
.+ |+++++++++++|++|++++|+||||.+.|+++|.++|++||+++|+|++|+.+.....+ .+++|+++.|+|
T Consensus 139 ~~-----d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~g~div~~S~s 212 (400)
T 3nmy_A 139 LT-----DPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPL-SLGADLVVHSAT 212 (400)
T ss_dssp TT-----SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGG-GGTCSEEEEETT
T ss_pred CC-----CHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hcCCcEEEecCc
Confidence 65 899999999999999999999999999999999999999999999999999865432222 357899999999
Q ss_pred cccCCCc--e-E-EEEEe-cCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 1594 KIYGPKG--I-G-ALYIR-RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNG 1668 (2602)
Q Consensus 1594 K~~gp~G--~-G-~l~~~-~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~ 1668 (2602)
|++|.+| + | +++++ +++.+.+...... ...+.+....+.+...++ .+....++..+++.++.+.
T Consensus 213 K~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~-------~g~~~~~~~a~~~l~~l~----~l~~r~~~~~~~a~~l~~~ 281 (400)
T 3nmy_A 213 KYLNGHSDMVGGIAVVGDNAELAEQMAFLQNS-------IGGVQGPFDSFLALRGLK----TLPLRMRAHCENALALAQW 281 (400)
T ss_dssp TTTTCSSSCCCEEEEECSCHHHHHHHHHHHHH-------HCCBCCHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCcceeEEEEeCCHHHHHHHHHHHHh-------cCCCCCHHHHHHHHHhHh----HHHHHHHHHHHHHHHHHHH
Confidence 9665332 3 5 34443 3333333322110 111233222222222332 2445666777888888888
Q ss_pred HhhcCCcEEEeCCCC--------------CCCCceEEEEEecC--CcHHHHHhc--CCEEEccccccCC--------CCC
Q psy15216 1669 LMESIEEIYINGDMN--------------NRIPHNLNISFNFI--EGESLLMAI--KDIAVSSGSACTS--------ASL 1722 (2602)
Q Consensus 1669 L~~~~~gl~i~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~L--~gI~v~~g~~~~~--------~~~ 1722 (2602)
|.+ .|.+.-...+. .....+..|.+++. ....++..+ .++.++.|..++- ...
T Consensus 282 L~~-~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~ 360 (400)
T 3nmy_A 282 LET-HPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHAS 360 (400)
T ss_dssp HTT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTT
T ss_pred HHc-CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCcccccccc
Confidence 877 67765332111 11223344444321 134556665 3455555543321 111
Q ss_pred ChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHH
Q psy15216 1723 EPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 1763 (2602)
Q Consensus 1723 ~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~ 1763 (2602)
.+......+|+++ +.+|+|++..++++.++.+-++|+
T Consensus 361 ~~~~~~~~~gi~~----~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 361 IPVARREQLGISD----ALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp SCHHHHHHHTCCT----TEEEEECCSSCHHHHHHHHHHHHC
T ss_pred CCHHHHHhcCCCc----CeEEEEeCcCCHHHHHHHHHHHHh
Confidence 2333445567664 899999999877776666666664
No 451
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.75 E-value=4.6e-17 Score=215.54 Aligned_cols=313 Identities=13% Similarity=0.090 Sum_probs=206.6
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~-~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
.++.+.+++.+.+.....+. ......+..++++++++++++... +++++++|+++|+..++.++.. ..+++
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~------~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~--~~~~~ 131 (439)
T 3dxv_A 60 GHPAIVAAVSAAAANPAGAT------ILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVK--ATGRS 131 (439)
T ss_dssp SCHHHHHHHHHHHHSCSCSC------SSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHH--HHSCC
T ss_pred CCHHHHHHHHHHHHhccCcc------ccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHH--HhCCC
Confidence 78999999999887532111 111223467889999999997655 6999999999999999998531 13567
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCcE--------------EEEeccCCCCcc-----ChHHHHhhc----cCCceEEEEec
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGFR--------------VTYLKPKNNGLI-----TLSQLEEKI----CSDTILVSVML 144 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~~--------------v~~v~~~~~~~l-----d~e~l~~~i----~~~tklv~i~~ 144 (2602)
.|++.++.|++.......+ .+.. +..++.+..+.. |+++|++++ .+++++|+++.
T Consensus 132 ~vi~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p 209 (439)
T 3dxv_A 132 GVIAFAGAYHGCTVGSMAF--SGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEP 209 (439)
T ss_dssp EEEEETTCCCCSSHHHHCC---------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECS
T ss_pred EEEEECCCCCCCcHHHHhh--cCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 7777777776654433222 1111 123333222222 689999999 56789999999
Q ss_pred ccCccccccc----HHHHHHHHHhcCCEEEEecccc-ccc----ccccCCCCCccEEEeccccccCCCC--cEEEEEecC
Q psy15216 145 VNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGK----IDINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRN 213 (2602)
Q Consensus 145 ~~npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~----~~~dl~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~ 213 (2602)
++|++|.+.| +++|.++|++||+++|+|++|+ ++. ...+.....+|++ |++|.+|+ | +|+++++++
T Consensus 210 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G~riG~~~~~~~ 286 (439)
T 3dxv_A 210 IQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLGG-GLPLSAVIAPAE 286 (439)
T ss_dssp SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TSCCEEEEEEHH
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhcC-CcceEEEEECHH
Confidence 9999999999 9999999999999999999996 221 1223333446776 77896653 4 799999998
Q ss_pred CCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc---cCceEEeCCCCCCC
Q psy15216 214 PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRI 290 (2602)
Q Consensus 214 ~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~g~~l~~~~~~~~ 290 (2602)
+++.+.+...+ ... .+..+++++.++++.... ++..++.+++.+++++.|.+. .+.+....+.
T Consensus 287 ~~~~~~~~~~~-------~t~-~~~~~~~aa~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---- 352 (439)
T 3dxv_A 287 ILDCASAFAMQ-------TLH-GNPISAAAGLAVLETIDR--DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGR---- 352 (439)
T ss_dssp HHTSCSSSSCC-------TTT-TCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE----
T ss_pred HHhhhcCCCcC-------CCc-ccHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE----
Confidence 87777654211 122 455666666677775433 344555666666666666541 3444333221
Q ss_pred CceEEEEEc--------c-cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q psy15216 291 PHNLNISFN--------F-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 359 (2602)
Q Consensus 291 ~~~~~~~~~--------~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edi 359 (2602)
..++.+.+. . .....+...| +||.++++... .+++||+++...+++|+
T Consensus 353 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~---------------------~~~iRi~~~~~~t~e~i 411 (439)
T 3dxv_A 353 GLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMN---------------------GNVLEFTPPLTITETDI 411 (439)
T ss_dssp TTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTT---------------------SCEEEECCCTTCCHHHH
T ss_pred EEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCC---------------------CCEEEEECCCCCCHHHH
Confidence 123333331 1 1233455555 69988866321 27899999888999999
Q ss_pred HHHHHHHHhh
Q psy15216 360 DFTIKLLKMK 369 (2602)
Q Consensus 360 d~li~~L~~~ 369 (2602)
++++++|++.
T Consensus 412 ~~~l~~l~~~ 421 (439)
T 3dxv_A 412 HKALDLLDRA 421 (439)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999964
No 452
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.75 E-value=3.1e-17 Score=216.41 Aligned_cols=312 Identities=13% Similarity=0.104 Sum_probs=209.1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHh-CCCCCcEEEeCCHHHHHHHHHH---hhhhhhcc
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI-YADPREIIWTSGATESNNLAIK---GAAHFYKK 1480 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~-g~~~~~iv~t~gaT~al~~al~---~l~~~~~~ 1480 (2602)
.++.+.+++.+.++... +... .+.......++++++++++ +..+++|++|+|+++|+..++. ++. +
T Consensus 58 ~~~~v~~a~~~~~~~~~-~~~~-----~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~----~ 127 (426)
T 1sff_A 58 LHPKVVAAVEAQLKKLS-HTCF-----QVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT----K 127 (426)
T ss_dssp TCHHHHHHHHHHTTTCS-CCCT-----TTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHH----T
T ss_pred CCHHHHHHHHHHHHhCC-Cccc-----cccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhh----C
Confidence 57789999998886521 2111 1112245678999999999 5223789999999999999988 444 5
Q ss_pred CCCEEEEcCCCCcchHH-HHHHHHhC-----Cc-----EEEEeccCC-----CCCcChhHHHhhcc-----CCceEEEEe
Q psy15216 1481 RGKHIITVQTEHKSVLD-SIRKLEND-----GF-----RVTYLKPKN-----NGLITLSQLEEKIC-----SDTILVSVM 1539 (2602)
Q Consensus 1481 ~gd~Vlv~~~~~~s~~~-~~~~~~~~-----G~-----~v~~v~~~~-----~~~id~d~l~~~i~-----~~t~lv~l~ 1539 (2602)
+| +|++.++.|+++.. ........ +. .++.++.+. ++.+|+++|+++++ +++++|+++
T Consensus 128 ~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~ 206 (426)
T 1sff_A 128 RS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIE 206 (426)
T ss_dssp CC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEEC
T ss_pred CC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEe
Confidence 66 89999999887543 33332110 11 266676653 23478999999986 467788775
Q ss_pred c-cccccccccC----hHHHHHHhhhcCCEEEEecccc-cCcc----cccCCCCCccEEEEccccccCCCc--eEEEEEe
Q psy15216 1540 L-VNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGPKG--IGALYIR 1607 (2602)
Q Consensus 1540 ~-~~n~tG~~~~----l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~~~~~D~~v~S~~K~~gp~G--~G~l~~~ 1607 (2602)
+ ++| ||...+ +++|.++|++||+++|+|++|+ ++.. .++.....+|++ |++|.+|+ | +|+++++
T Consensus 207 p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-GlriG~~~~~ 282 (426)
T 1sff_A 207 PVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-GFPLAGVTGR 282 (426)
T ss_dssp SBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-SSCCEEEEEE
T ss_pred cccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEE--EEcccccC-CCceEEEEEc
Confidence 4 455 997777 9999999999999999999998 3211 122223346765 77898877 7 6999999
Q ss_pred cCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCcEEEeCCCCC
Q psy15216 1608 RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNN 1684 (2602)
Q Consensus 1608 ~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~gl~i~~~~~~ 1684 (2602)
+++++.+.+... ....+.+...+.++.++|+.... ....++..+++++++++|.+. ++.+....+ .
T Consensus 283 ~~~~~~l~~~~~-------~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~- 351 (426)
T 1sff_A 283 AEVMDAVAPGGL-------GGTYAGNPIACVAALEVLKVFEQ--ENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRG-L- 351 (426)
T ss_dssp HHHHTTSCTTSB-------CCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEE-E-
T ss_pred HHHHhhhccCCc-------CcCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE-E-
Confidence 877666653211 11234566777777788886543 245667777788888777652 333332211 1
Q ss_pred CCCceEEEEEec---------CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHH
Q psy15216 1685 RIPHNLNISFNF---------IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEK 1753 (2602)
Q Consensus 1685 ~~~~~~~~~~~~---------~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~e 1753 (2602)
..+..+.+.. .+..++...| +||.+++|..+ .+++||+++..++.+
T Consensus 352 --g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~---------------------~~~iRi~~~~~~~~~ 408 (426)
T 1sff_A 352 --GAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPY---------------------YNVLRILVPLTIEDA 408 (426)
T ss_dssp --TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTT---------------------SCEEEECCCTTCCHH
T ss_pred --EEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCC---------------------CCEEEEECCccCCHH
Confidence 2334445531 1234555555 79999877642 278999999899999
Q ss_pred HHHHHHHHHHHh
Q psy15216 1754 EIDFTIKLLKMK 1765 (2602)
Q Consensus 1754 did~li~~L~~~ 1765 (2602)
++++++++|++.
T Consensus 409 ~i~~~~~~l~~~ 420 (426)
T 1sff_A 409 QIRQGLEIISQC 420 (426)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999873
No 453
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.75 E-value=3.3e-18 Score=220.22 Aligned_cols=289 Identities=16% Similarity=0.154 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCE--EEEcCCCCcchHHHHHHHHhCCcEEEEecc
Q psy15216 1437 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH--IITVQTEHKSVLDSIRKLENDGFRVTYLKP 1514 (2602)
Q Consensus 1437 ~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~--Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~ 1514 (2602)
....++++++++++|.+. .++++|+++|+..++.++. ++||+ |+++.+.|++...........|++++.++.
T Consensus 48 ~~~~~l~~~la~~~~~~~--~i~~~~g~~a~~~a~~~~~----~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 121 (359)
T 3pj0_A 48 AVIEDFETKIAKILGKQS--AVFFPSGTMAQQIALRIWA----DRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT 121 (359)
T ss_dssp HHHHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHH----HHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC
T ss_pred HHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHH----hcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC
Confidence 357889999999999753 4666899999999999887 57776 666655555432211111223899999987
Q ss_pred CCCCCcChhHHHhhccCCceEEEEecccccc-ccccChHHH---HHHhhhcCCEEEEecccccCcc------cccCCCCC
Q psy15216 1515 KNNGLITLSQLEEKICSDTILVSVMLVNNEI-GVIQPILEI---GELCRSKGVIFHCDAAQAVGKI------DINIQNYK 1584 (2602)
Q Consensus 1515 ~~~~~id~d~l~~~i~~~t~lv~l~~~~n~t-G~~~~l~~I---~~ia~~~gi~vivD~a~~~g~~------~~~l~~~~ 1584 (2602)
.++.+|+++|+++ ++++++|++++|+||+ |.++|.++| .++|++||+++|+|++|..+.. +.++. .+
T Consensus 122 -~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~ 198 (359)
T 3pj0_A 122 -ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC-AL 198 (359)
T ss_dssp -TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH-TT
T ss_pred -cCCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh-cc
Confidence 4678999999999 8899999999999998 799886555 9999999999999999865432 11121 35
Q ss_pred ccEEEEcccc-ccCCCceEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 1585 VDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 1663 (2602)
Q Consensus 1585 ~D~~v~S~~K-~~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~ 1663 (2602)
.|++++|+|| +.+|.| |+++.++++++.+.......+ ......+.....++ .+++. .. +..+++.++++
T Consensus 199 ~d~~~~s~sK~~~~~~g-g~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~a~~-~~l~~---~~-~~~~~~~~~~~ 268 (359)
T 3pj0_A 199 FDSVYVSFYKGIGGIAG-AILAGNDDFVQEAKIWKRRYG----GDLISLYPYILSAD-YYFEK---RI-GKMAEYFEAAK 268 (359)
T ss_dssp CSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHHHTT----CCCSCCHHHHHHHH-HHHHH---HG-GGHHHHHHHHH
T ss_pred CCEEEEeccccCCCcce-EEEECCHHHHHHHHHHHHHhC----CCcchhHHHHHHHH-HHHHH---HH-HHhHHHHHHHH
Confidence 6899999999 455655 888888877666643211000 00011122222222 33332 12 34445677888
Q ss_pred HHHHHHhhcCCcEEEeCCCCCCCCceEEEEEecC---CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCcccc
Q psy15216 1664 RLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI---EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELA 1738 (2602)
Q Consensus 1664 ~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 1738 (2602)
++.+.|.+ ++++.+...+.. ..+..+.++.. +...+...| +||.+++|..+..+ .
T Consensus 269 ~l~~~L~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~-----------------~ 328 (359)
T 3pj0_A 269 GLAERFNS-CSGVKTVPEVPV--SNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSA-----------------D 328 (359)
T ss_dssp HHHHHHHT-STTEEEESSSCS--SSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEET-----------------T
T ss_pred HHHHHHhh-CCCceeeccCCc--ceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCC-----------------C
Confidence 99999987 789988522221 23444555432 234555555 79999988765422 1
Q ss_pred CCeEEEecCC---CCCHHHHHHHHHHHHH
Q psy15216 1739 HSSIRFTIGR---FTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1739 ~~~iRls~~~---~~t~edid~li~~L~~ 1764 (2602)
.+++|++++. ..+.++++.+++.|.+
T Consensus 329 ~~~~r~~i~~~~~~~~~e~l~~~l~~l~~ 357 (359)
T 3pj0_A 329 VCAFEVSVGDAFAEIPAKNLELVFRCLEK 357 (359)
T ss_dssp EEEEEEECCTTGGGSCHHHHHHHHHHHHH
T ss_pred ceEEEEEecCccccCCHHHHHHHHHHHHh
Confidence 2689998864 3578999999988875
No 454
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.75 E-value=1.2e-17 Score=214.74 Aligned_cols=286 Identities=15% Similarity=0.137 Sum_probs=194.4
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCC--EEEEcCCCCcchHHHHHHHHhCCcEEEEeccC
Q psy15216 1438 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK--HIITVQTEHKSVLDSIRKLENDGFRVTYLKPK 1515 (2602)
Q Consensus 1438 ~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd--~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~ 1515 (2602)
...++++++++++|.+ ..++++|+|+|+..++.++. ++|| +|+++.+.|++...........|++++.++.
T Consensus 48 ~~~~l~~~la~~~~~~--~~i~~~~G~~a~~~al~~~~----~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~- 120 (357)
T 3lws_A 48 IIEPFEQKFADVLGMD--DAVFFPSGTMAQQVALRIWS----DETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGA- 120 (357)
T ss_dssp THHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHH----HHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC-
T ss_pred HHHHHHHHHHHHhCCC--cEEEecCcHHHHHHHHHHHh----hcCCCcEEEecccceeeeeccchhhhccCcEEEEecC-
Confidence 4678999999999974 45666888999999998887 6777 7888877776654322223344899998884
Q ss_pred CCCCcChhHHHhhccCCceEEEEecccccc-ccccC---hHHHHHHhhhcCCEEEEecccccC------cccccCCCCCc
Q psy15216 1516 NNGLITLSQLEEKICSDTILVSVMLVNNEI-GVIQP---ILEIGELCRSKGVIFHCDAAQAVG------KIDINIQNYKV 1585 (2602)
Q Consensus 1516 ~~~~id~d~l~~~i~~~t~lv~l~~~~n~t-G~~~~---l~~I~~ia~~~gi~vivD~a~~~g------~~~~~l~~~~~ 1585 (2602)
+++.+|+++|+++. ++++|++++|+||| |.++| +++|.++|++||+++|+|++|..+ ....++. ...
T Consensus 121 ~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~ 197 (357)
T 3lws_A 121 ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA-GLF 197 (357)
T ss_dssp TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH-TTS
T ss_pred CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH-hcC
Confidence 45679999999984 49999999999998 99887 889999999999999999998621 1111111 246
Q ss_pred cEEEEcccccc-CCCceEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15216 1586 DLMSFSAHKIY-GPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKR 1664 (2602)
Q Consensus 1586 D~~v~S~~K~~-gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~ 1664 (2602)
|++++|+||.+ ||.| |+++.++++++.+.......+ ....+.+.....++ .+++. . .+..+++.+++++
T Consensus 198 d~~~~s~sK~~~~~~g-g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~l~~---~-~~~~~~~~~~~~~ 267 (357)
T 3lws_A 198 DSIYISFYKGLGGIAG-AILAGPAAFCQTARIWKRRYG----GDLISLYPYIVSAD-YYYEL---R-KDRMGQYYEQAKQ 267 (357)
T ss_dssp SEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHHHTT----CCCSCCHHHHHHHH-HHHHH---H-TTCHHHHHHHHHH
T ss_pred CEEEEeccccCCCCce-EEEEcCHHHHHHHHHHHHHhc----CCcccchHHHHHHH-HHHHH---H-HHHHHHHHHHHHH
Confidence 88899999966 7887 999998876666543221000 00011222222222 33332 2 2233445777888
Q ss_pred HHHHHhhcCCcEEEeCCCCCCCCceEEEEEecC---CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccC
Q psy15216 1665 LYNGLMESIEEIYINGDMNNRIPHNLNISFNFI---EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAH 1739 (2602)
Q Consensus 1665 l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 1739 (2602)
+.+.|.+ ++++.+...+.. ..+..+.++.. +...+...| +||.+++|..+.++ .
T Consensus 268 l~~~L~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~------------------~ 326 (357)
T 3lws_A 268 LAEQFNA-LPGVHTTPEVPV--SNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDG------------------Y 326 (357)
T ss_dssp HHHHHHT-STTEEEESSSCS--SSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSS------------------E
T ss_pred HHHHHHh-CCCCeeccCCCc--ceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCC------------------c
Confidence 9999987 789988422222 23444555532 134555555 79999988654321 2
Q ss_pred CeEEEecCCC---CCHHHHHHHHHHHHH
Q psy15216 1740 SSIRFTIGRF---TTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1740 ~~iRls~~~~---~t~edid~li~~L~~ 1764 (2602)
+++|++++.. .+.++++.+++.|.+
T Consensus 327 ~~~r~~i~~~~~~~~~~~l~~al~~l~~ 354 (357)
T 3lws_A 327 CSTEISVGDAYGELDQQTRDAGFARLRQ 354 (357)
T ss_dssp EEEEEEBCTTGGGSCHHHHHHHHHHHHH
T ss_pred eEEEEEecchhhhcCHHHHHHHHHHHHH
Confidence 5899998753 588899999988876
No 455
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.75 E-value=3.3e-18 Score=224.20 Aligned_cols=276 Identities=11% Similarity=0.055 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHHHhh--------hhhhccCCCEEEEcCCCCcchHHHHHHHHh
Q psy15216 1439 IEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGA--------AHFYKKRGKHIITVQTEHKSVLDSIRKLEN 1504 (2602)
Q Consensus 1439 ~~~lr~~ia~~~g------~~~~~iv~t~gaT~al~~al~~l--------~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~ 1504 (2602)
..++|++++++++ +++++|++|+|+++++++++.++ . ++||+|+++.|.|+++...++..
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~----~~Gd~Vlv~~P~y~~~~~~~~~~-- 175 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPD----APESKVVAHAPFYPVFREQTKYF-- 175 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTT----SCCEEEEECSSCCHHHHHHHHHS--
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccC----CCCCEEEEeCCCcccHHHHHHHc--
Confidence 4678888888885 57889999999999999999998 6 79999999999999988776655
Q ss_pred CCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCccc-ccCCCC
Q psy15216 1505 DGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKID-INIQNY 1583 (2602)
Q Consensus 1505 ~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~~-~~l~~~ 1583 (2602)
|++++. +.+|+++|++++++++++|++++|+||||.+++ + +++ ++..+.|+++..+..+ .++. .
T Consensus 176 -g~~~~~------~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s~~~~~-~ 240 (427)
T 2hox_A 176 -DKKGYV------WAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYTPIKYK-A 240 (427)
T ss_dssp -CBTTEE------EEEEGGGGTTCSCGGGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTSCCCSC-B
T ss_pred -CCeeee------ecCCHHHHHHhhcCCceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCCccccC-C
Confidence 766553 336889999999989999999999999999999 4 333 5678889876532211 1222 4
Q ss_pred CccEEEEccccccCCCc--eEEEEEe-cCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHH-----------H
Q psy15216 1584 KVDLMSFSAHKIYGPKG--IGALYIR-RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLAR-----------I 1649 (2602)
Q Consensus 1584 ~~D~~v~S~~K~~gp~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~-----------~ 1649 (2602)
+.+++++|+||.+|++| +||++++ +++++.+...... .. .+.+...+.++..+|+... .
T Consensus 241 ~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~------~~-~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~ 313 (427)
T 2hox_A 241 DEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTK------NT-EGTPRETQLRSLKVLKEVVAMVKTQKGTMRD 313 (427)
T ss_dssp CCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHH------HT-SSCCHHHHHHHHHHHHHHHHHHHHHTTSTTS
T ss_pred CceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHh------cC-CCCCHHHHHHHHHHhhcchhhhccccchhHH
Confidence 57899999999999888 8999995 6666666543211 11 2344444444546665321 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcEEE--eC-CCC--------CCCCceEEEEEecCCcHHHHHhc---CCEEEcccc
Q psy15216 1650 EMKEELKRILFLQKRLYNGLMESIEEIYI--NG-DMN--------NRIPHNLNISFNFIEGESLLMAI---KDIAVSSGS 1715 (2602)
Q Consensus 1650 ~~~~~~~~~~~l~~~l~~~L~~~~~gl~i--~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~L---~gI~v~~g~ 1715 (2602)
.++..+++++++++++.+.|.+ .+++.+ .. +.. ........+.++. +..++...| +||.+++|.
T Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-~~~~~~~~ll~~~gI~v~pg~ 391 (427)
T 2hox_A 314 LNTFGFKKLRERWVNITALLDQ-SDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-EEDKDCYQTFQNGRINTQNGV 391 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-SSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS-GGGCSHHHHHHHTTEECEEGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CcCccccccccccccccccccCCCCceEEEEECCC-cHHHHHHHHHHHCCEEEcCCC
Confidence 3456778888999999999987 678775 21 110 0012222233332 233343332 799999998
Q ss_pred ccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1716 ACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1716 ~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
.|... .+++|||++ ++.++++.++++|++
T Consensus 392 ~f~~~------------------~~~~Ris~~--~~~e~l~~~l~~l~~ 420 (427)
T 2hox_A 392 GFEAS------------------SRYVRLSLI--KTQDDFDQLMYYLKD 420 (427)
T ss_dssp GGTSC------------------TTEEEEECS--SCHHHHHHHHHHHHH
T ss_pred ccCCC------------------CCEEEEEec--CCHHHHHHHHHHHHH
Confidence 77431 289999998 488999999999986
No 456
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.75 E-value=1.1e-16 Score=210.85 Aligned_cols=308 Identities=15% Similarity=0.134 Sum_probs=205.1
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccccc-----c
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY-----K 83 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~-----~ 83 (2602)
.+|.+.+++.+.+.... .... .+ ..+...++++++++++| .+++++++|+++|+..++.++.... +
T Consensus 82 ~~p~v~~ai~~~~~~~~-~~~~-~~-----~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~al~~a~~~~~~~~g~ 152 (433)
T 1z7d_A 82 CHPNILNAMINQAKNLT-ICSR-AF-----FSVPLGICERYLTNLLG--YDKVLMMNTGAEANETAYKLCRKWGYEVKKI 152 (433)
T ss_dssp TCHHHHHHHHHHHTTCS-CCCT-TS-----EEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHhCC-CccC-Cc-----CCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHHHHHHHHHHhhhccCC
Confidence 78999999999886532 2111 11 22456788999999998 4689999999999999998764110 1
Q ss_pred cCC-CEEEEcCCCCcccHHH-HHHHHh----CC-----cEEEEeccCCCCccChHHHHhhc-cCCceEEEEecccCcccc
Q psy15216 84 KRG-KHIITVQTEHKSVLDS-IRKLEN----DG-----FRVTYLKPKNNGLITLSQLEEKI-CSDTILVSVMLVNNEIGV 151 (2602)
Q Consensus 84 ~~g-d~Vlv~~~~~~s~~~~-~~~~~~----~G-----~~v~~v~~~~~~~ld~e~l~~~i-~~~tklv~i~~~~npTG~ 151 (2602)
.+| ++|++.++.|++.... +..... .+ ..+..++. .|+++|++++ ++++++|+++.+++++|.
T Consensus 153 ~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~~~vi~ep~~~~~G~ 227 (433)
T 1z7d_A 153 PENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-----DDLEALEEELKDPNVCAFIVEPIQGEAGV 227 (433)
T ss_dssp CTTCCEEEEETTC--------------------------CEEEECT-----TCHHHHHHHHTSTTEEEEEECSSBSTTTS
T ss_pred CCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCCEEEEEEECCCCCCCc
Confidence 367 9999999998875433 222210 01 23444443 3899999999 578899888888888998
Q ss_pred cc----cHHHHHHHHHhcCCEEEEecccc-ccccc----ccCCCCCccEEEeccccccCCCC---cEEEEEecCCCCccc
Q psy15216 152 IQ----PILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHKIYGPKG---IGALYIRRNPRTRIE 219 (2602)
Q Consensus 152 ~~----~l~~I~~la~~~g~~livD~a~a-~g~~~----~dl~~~~~D~~~~S~~K~~Gp~G---~G~l~~~~~~~~~l~ 219 (2602)
+. ++++|.++|++||+++|+|++|. ++... .+.....+|++ |++|.+| .| +|++++++++++.+.
T Consensus 228 ~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~-~G~~~~G~v~~~~~~~~~l~ 304 (433)
T 1z7d_A 228 IVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLGKALS-GGHYPISAVLANDDIMLVIK 304 (433)
T ss_dssp BCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG-TTSSCCEEEEECHHHHTTCC
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE--EECcccc-CCCCCeEEEEECHHHHhhhc
Confidence 76 69999999999999999999996 32211 12223357876 6779766 34 899999988777765
Q ss_pred ceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc---cCceEEeCCCCCCCCceEEE
Q psy15216 220 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNI 296 (2602)
Q Consensus 220 ~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~g~~l~~~~~~~~~~~~~~ 296 (2602)
+...+ ...+.+..+.+++.++|+.... ++..++..++.+++.++|.+. ++.+....+ ...++.+
T Consensus 305 ~~~~~-------~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~----~g~~~~i 371 (433)
T 1z7d_A 305 PGEHG-------STYGGNPLAASICVEALNVLIN--EKLCENAEKLGGPFLENLKRELKDSKIVRDVRG----KGLLCAI 371 (433)
T ss_dssp TTCCC-------CTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEE----ETTEEEE
T ss_pred ccccc-------ccCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe----eeeEEEE
Confidence 42211 1224566667777778875543 256677788888888888652 233222211 1234455
Q ss_pred EEccc--ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 297 SFNFI--EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 297 ~~~~~--~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
.++.. +..++...| +||.++++. .+++|++++..++++|+++++++|++.
T Consensus 372 ~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~ 425 (433)
T 1z7d_A 372 EFKNELVNVLDICLKLKENGLITRDVH-----------------------DKTIRLTPPLCITKEQLDECTEIIVKT 425 (433)
T ss_dssp EECTTTCCHHHHHHHHHHTTEECCEET-----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEccChhHHHHHHHHHHHCCeEEecCC-----------------------CCEEEEECCcCCCHHHHHHHHHHHHHH
Confidence 55532 355666666 799887541 278999998889999999999999864
No 457
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.74 E-value=1.9e-17 Score=213.48 Aligned_cols=255 Identities=12% Similarity=0.089 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHhh-ccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHhhhhhhccCCC
Q psy15216 1407 PRVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIW--TSGATESNNLAIKGAAHFYKKRGK 1483 (2602)
Q Consensus 1407 ~~v~eal~~~l~~-~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~--t~gaT~al~~al~~l~~~~~~~gd 1483 (2602)
.++++++.+.... ...++.. .|.++.. ...++++.+++++|++. .+++ ++|+++|+..++.++. ++||
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~-~~~y~~~---~~~~Le~~lA~l~g~e~-alv~p~~~sGt~Ai~~al~all----~~GD 102 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPST-GYGYDDE---GRDTLERVYATVFKTEA-ALVRPQIISGTHAISTVLFGIL----RPDD 102 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCC-TTCTTCH---HHHHHHHHHHHHHTCSE-EEEETTSCSHHHHHHHHHHHHC----CTTC
T ss_pred HHHHHHHHHhhhhhhccCCCc-CCCCChh---HHHHHHHHHHHHhCCCc-EEEECCCccHHHHHHHHHHHhc----CCCC
Confidence 3567777775422 1223322 3444332 36788999999999753 3443 8899999999999887 8999
Q ss_pred EEEEcC-CCCcchHHHH-------HHHHhCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEec----cccccccccCh
Q psy15216 1484 HIITVQ-TEHKSVLDSI-------RKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVML----VNNEIGVIQPI 1551 (2602)
Q Consensus 1484 ~Vlv~~-~~~~s~~~~~-------~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~----~~n~tG~~~~l 1551 (2602)
+|++++ +.|+.+...+ ..++..|++++.++.++++.+|+++++++++++|++|++++ |+||||.+.|+
T Consensus 103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l 182 (409)
T 3jzl_A 103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKI 182 (409)
T ss_dssp EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHH
T ss_pred EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccH
Confidence 999998 9999887655 33455699999999988899999999999999999999999 99999999999
Q ss_pred HHHHHHhhh--cCCEEEEecccccCcccccCCCCCccEEEEccccccCCCc---eEEEEEecCCCCccccccccCCcccc
Q psy15216 1552 LEIGELCRS--KGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYG 1626 (2602)
Q Consensus 1552 ~~I~~ia~~--~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~G---~G~l~~~~~~~~~l~~~~~g~~~~~~ 1626 (2602)
++|.++|++ ||+++++|++|+.+........+++|++++|+||.+|+.| .|+++.++++++.+.......+. +
T Consensus 183 ~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~--g 260 (409)
T 3jzl_A 183 KEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGI--G 260 (409)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTT--G
T ss_pred HHHHHHHHhhCCCCEEEEeCCcccccccCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccc--c
Confidence 999999999 9999999999987763333345678999999999665433 49999998877766542211000 0
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEe
Q psy15216 1627 LRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYIN 1679 (2602)
Q Consensus 1627 ~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~ 1679 (2602)
...+. ......++..++.. ...++++..+.+.++.+.|.+ . ++.+.
T Consensus 261 ~~~g~-~~~~~~~~l~gl~~----~~~r~~~~~~~a~~la~~L~~-~-g~~v~ 306 (409)
T 3jzl_A 261 REAGA-SLYSLLEMYQGFFL----APHVTAQAIKGARFTAAMLAE-F-GVEAD 306 (409)
T ss_dssp GGCCC-CTTCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH-T-TCEEE
T ss_pred ccccc-cHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHh-C-CCccc
Confidence 11111 11112222233332 345667778888899999987 3 45554
No 458
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.74 E-value=1.9e-17 Score=213.81 Aligned_cols=255 Identities=15% Similarity=0.068 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHh-hccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHhhhhhhccCCC
Q psy15216 1407 PRVVDKMIPYLR-VQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIW--TSGATESNNLAIKGAAHFYKKRGK 1483 (2602)
Q Consensus 1407 ~~v~eal~~~l~-~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~--t~gaT~al~~al~~l~~~~~~~gd 1483 (2602)
.++++++.+... ....++.. .|.++.. ...++++.+++++|++.. +++ ++|+++|+..++.++. +|||
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~-gy~y~~~---~~~~Le~~lA~l~g~e~a-lv~p~~~sGt~Ai~~al~all----~pGD 116 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSS-GYGYGDI---GRDSLDAVYARVFNTESA-LVRPHFVNGTHALGAALFGNL----RPGN 116 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCC-TTCTTCH---HHHHHHHHHHHHHTCSEE-EEETTCCSHHHHHHHHHHHHC----CTTC
T ss_pred HHHHHHHHHhchhHHhcCCCC-CCCCCHH---HHHHHHHHHHHHhCCcce-EEeCCCccHHHHHHHHHHHHh----CCCC
Confidence 367777766531 12222322 3433332 277889999999998643 444 8999999999999987 8999
Q ss_pred EEEEcC-CCCcchHHHH--------HHHHhCCcEEEEeccCCCCCcChhHHHhhcc--CCceEEEEec----cccccccc
Q psy15216 1484 HIITVQ-TEHKSVLDSI--------RKLENDGFRVTYLKPKNNGLITLSQLEEKIC--SDTILVSVML----VNNEIGVI 1548 (2602)
Q Consensus 1484 ~Vlv~~-~~~~s~~~~~--------~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~--~~t~lv~l~~----~~n~tG~~ 1548 (2602)
+|++++ +.|+++...+ ..+...|++++.++.++++.+|+++++++++ ++|++|++++ |+||||.+
T Consensus 117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i 196 (427)
T 3i16_A 117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLI 196 (427)
T ss_dssp EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCH
T ss_pred EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccH
Confidence 999999 9999887555 3445569999999998888999999999999 8999999999 99999999
Q ss_pred cChHHHHHHhhh--cCCEEEEecccccCcccccCCCCCccEEEEccccccCCC---ceEEEEEecCCCCccccccccCCc
Q psy15216 1549 QPILEIGELCRS--KGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPK---GIGALYIRRNPRTRIEAQIHGGGH 1623 (2602)
Q Consensus 1549 ~~l~~I~~ia~~--~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp~---G~G~l~~~~~~~~~l~~~~~g~~~ 1623 (2602)
.|+++|+++|++ ||+++++|++|+.+........+++|++++|+||.+|+. ..|+++.++++++.+.........
T Consensus 197 ~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~ 276 (427)
T 3i16_A 197 EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGI 276 (427)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTT
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCccccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCcc
Confidence 999999999999 999999999998776333333467899999999966542 249999998877776553211000
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEe
Q psy15216 1624 EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYIN 1679 (2602)
Q Consensus 1624 ~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~ 1679 (2602)
+... .+.......+..++.. ...++++..+.+.++.+.|.+ . ++.+.
T Consensus 277 --g~~~-~~~~~~a~~~l~gl~~----~~~r~~~~~~~a~~la~~L~~-~-g~~V~ 323 (427)
T 3i16_A 277 --GGEC-GSTFGVVRSMYQGLFL----APHISMEALKGAILCSRIMEL-A-GFEVM 323 (427)
T ss_dssp --GGGC-CCCTTCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH-T-TCEEE
T ss_pred --CccC-CccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHh-C-CCeec
Confidence 0000 1111101112123322 355667778888888888887 3 44554
No 459
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.74 E-value=2.3e-16 Score=207.18 Aligned_cols=305 Identities=14% Similarity=0.117 Sum_probs=205.5
Q ss_pred CHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHhhhhhhccCCCE
Q psy15216 1406 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKKRGKH 1484 (2602)
Q Consensus 1406 ~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~-~~~iv~t~gaT~al~~al~~l~~~~~~~gd~ 1484 (2602)
++.+.+++.+.++....+... .+. .....++++++++++|.+ +++|+||+|+++|++.++.++.. -+|++
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~-~~~-----~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~---~~~~~ 131 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKLAHAAAN-DFY-----NIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKN---TGRKY 131 (419)
T ss_dssp CHHHHHHHHHHHTTSCCCSCS-CSC-----CHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHT---TSCCE
T ss_pred CHHHHHHHHHHHhhCcccccc-ccC-----CHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHH---hhCCc
Confidence 789999999998653211101 111 134577889999999987 78999999999999999998651 13899
Q ss_pred EEEcCCCCcchHHHHHHHH------hC-----CcEEEEeccCCCCC----------------cChhHHH-hhcc-----C
Q psy15216 1485 IITVQTEHKSVLDSIRKLE------ND-----GFRVTYLKPKNNGL----------------ITLSQLE-EKIC-----S 1531 (2602)
Q Consensus 1485 Vlv~~~~~~s~~~~~~~~~------~~-----G~~v~~v~~~~~~~----------------id~d~l~-~~i~-----~ 1531 (2602)
|++++|.|+++......+. +. ...++.++.+.++. +|+++|+ ++++ +
T Consensus 132 vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~ 211 (419)
T 2eo5_A 132 IIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPE 211 (419)
T ss_dssp EEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGG
T ss_pred EEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCC
Confidence 9999999886544333221 11 12566777654322 4688999 9887 4
Q ss_pred CceEEEEeccccccccccC----hHHHHHHhhhcCCEEEEecccc-cCcc----cccCCCCCccEEEEccccccCC--Cc
Q psy15216 1532 DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGP--KG 1600 (2602)
Q Consensus 1532 ~t~lv~l~~~~n~tG~~~~----l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~~~~~D~~v~S~~K~~gp--~G 1600 (2602)
++++|+++..+|+||.+.| +++|.++|++||+++|+|++|+ ++.. .++.....+|++ |++|.+|+ -+
T Consensus 212 ~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~G~~r 289 (419)
T 2eo5_A 212 EVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGGGIMP 289 (419)
T ss_dssp GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTTTSC
T ss_pred CEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccCCccc
Confidence 5667777666677898777 9999999999999999999997 4422 122223456766 57795543 44
Q ss_pred eEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeC
Q psy15216 1601 IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYING 1680 (2602)
Q Consensus 1601 ~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~ 1680 (2602)
+|+++++++++ .+ ... . ....+.+...+.+..++|+.... ..++.+++++++.+.|.+ + +....
T Consensus 290 iG~~~~~~~~~-~~-~~~------~-~~t~~~n~~~~~aa~aal~~~~~----~~~~~~~~~~~l~~~L~~-~--~~~~~ 353 (419)
T 2eo5_A 290 IGATIFRKDLD-FK-PGM------H-SNTFGGNALACAIGSKVIDIVKD----LLPHVNEIGKIFAEELQG-L--ADDVR 353 (419)
T ss_dssp CEEEEEEGGGC-CC--------------CCCCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHTT-S--SSEEE
T ss_pred eEEEEEchHhh-cC-Ccc------c-CCCCCCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH-h--hhheE
Confidence 89999998866 55 211 1 11234566777777788875432 778888999999999976 3 11110
Q ss_pred CCCCCCCceEEEEE-ec-CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHH
Q psy15216 1681 DMNNRIPHNLNISF-NF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEID 1756 (2602)
Q Consensus 1681 ~~~~~~~~~~~~~~-~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid 1756 (2602)
+ ...+..+.+ +. .... +...| +||.++++. . +++||+++...|+++++
T Consensus 354 ~----~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~----~-------------------~~lRis~~~~~t~e~i~ 405 (419)
T 2eo5_A 354 G----IGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG----R-------------------SAIRVIPPLVISEEEAK 405 (419)
T ss_dssp E----ETTEEEEECSCHHHHHH-HHHHHHHTTEECEEET----T-------------------TEEEECCCTTCCHHHHH
T ss_pred e----eeEEEEEEEecCccHHH-HHHHHHHCCCEEecCC----C-------------------CEEEEECCCCCCHHHHH
Confidence 0 122333333 21 1133 55555 799988642 1 78999999889999999
Q ss_pred HHHHHHHHh
Q psy15216 1757 FTIKLLKMK 1765 (2602)
Q Consensus 1757 ~li~~L~~~ 1765 (2602)
+++++|++.
T Consensus 406 ~~l~~l~~~ 414 (419)
T 2eo5_A 406 QGLDILKKV 414 (419)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999873
No 460
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.74 E-value=7.6e-17 Score=213.97 Aligned_cols=323 Identities=12% Similarity=0.067 Sum_probs=212.2
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccc---
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--- 83 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~--- 83 (2602)
++.++.+.+++.+.+.... .+. +. + ...+...+++++++++++.++++|++++|+++|+++++.++.....
T Consensus 65 G~~~~~v~~a~~~~~~~~~--~~~--~~-~-~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g 138 (449)
T 3a8u_X 65 GHTRKEIQEAVAKQLSTLD--YSP--GF-Q-YGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKG 138 (449)
T ss_dssp CBSCHHHHHHHHHHTTTCS--CCC--SS-S-CCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhCC--Ccc--cc-c-cCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 3458999999999886532 111 00 1 1123567889999999988788999999999999999988761100
Q ss_pred -cCCCEEEEcCCCCcccHH-HHHHHH----hCC-----cEEEEeccCCCC-----ccC--------hHHHHhhcc----C
Q psy15216 84 -KRGKHIITVQTEHKSVLD-SIRKLE----NDG-----FRVTYLKPKNNG-----LIT--------LSQLEEKIC----S 135 (2602)
Q Consensus 84 -~~gd~Vlv~~~~~~s~~~-~~~~~~----~~G-----~~v~~v~~~~~~-----~ld--------~e~l~~~i~----~ 135 (2602)
.+||+|++.++.|++... ++.... +.+ ..++.++.+..+ .+| +++|+++++ +
T Consensus 139 ~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~ 218 (449)
T 3a8u_X 139 QATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDAS 218 (449)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGG
T ss_pred CCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCC
Confidence 167999999999987644 333221 000 123444433211 146 999999987 4
Q ss_pred CceEEEEecccCccccccc----HHHHHHHHHhcCCEEEEeccc-cccccc----ccCCCCCccEEEeccccccCCCC--
Q psy15216 136 DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQ-AVGKID----INIQNYKVDLMSFSAHKIYGPKG-- 204 (2602)
Q Consensus 136 ~tklv~i~~~~npTG~~~~----l~~I~~la~~~g~~livD~a~-a~g~~~----~dl~~~~~D~~~~S~~K~~Gp~G-- 204 (2602)
++++|++++.+|+||.+.| +++|.++|++||+++|+|++| ++|... ++.....+|++ |++|.++. |
T Consensus 219 ~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~ 295 (449)
T 3a8u_X 219 NIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN-GAI 295 (449)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSS
T ss_pred CEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC-CCC
Confidence 6778777777788999888 999999999999999999999 465321 12222346866 66796664 4
Q ss_pred -cEEEEEecCCCCcccceecCCCccccc---cccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc--cC
Q psy15216 205 -IGALYIRRNPRTRIEAQIHGGGHEYGL---RSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES--IE 278 (2602)
Q Consensus 205 -~G~l~~~~~~~~~l~~~~~g~~~~~~~---~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~--~~ 278 (2602)
+|++++++++++.+.+...+. ....+ ...+.+..+++++.++|+.... ++..++.+++.++++++|.+. ++
T Consensus 296 ~~G~~~~~~~~~~~l~~~~~~~-~~~~~~~~~t~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~ 372 (449)
T 3a8u_X 296 PMGAVIASTEIYQTFMNQPTPE-YAVEFPHGYTYSAHPVACAAGLAALCLLQK--ENLVQSVAEVAPHFEKALHGIKGAK 372 (449)
T ss_dssp CCEEEEEEHHHHHHHHTCSSCT-TSCSSCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHTTTTST
T ss_pred ceEEEEECHHHHHHhhccCccc-ccccccccCCCcccHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 899999987766554321000 00011 1234566777777788875543 356778888888888888761 22
Q ss_pred ceEEeCCCCCCCCceEEEEEcccC-h-----hHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec
Q psy15216 279 EIYINGDMNNRIPHNLNISFNFIE-G-----ESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI 350 (2602)
Q Consensus 279 g~~l~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~ 350 (2602)
.+....+ ...++.+.++... . .++...| +||.++++. +++||++
T Consensus 373 ~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g------------------------~~iRis~ 424 (449)
T 3a8u_X 373 NVIDIRN----FGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG------------------------DTLQFGP 424 (449)
T ss_dssp TEEEEEE----ETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET------------------------TEEEECC
T ss_pred CeEEEee----eEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC------------------------CEEEEEC
Confidence 2221111 1234455554321 1 1466555 688887541 5799999
Q ss_pred CCCCCHHHHHHHHHHHHhh
Q psy15216 351 GRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 351 ~~~~t~edid~li~~L~~~ 369 (2602)
+..++++|+++++++|++.
T Consensus 425 ~~~~t~~~i~~~l~~l~~~ 443 (449)
T 3a8u_X 425 TFNSKPQDLDRLFDAVGEV 443 (449)
T ss_dssp CTTCCHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHH
Confidence 8889999999999999864
No 461
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.74 E-value=2.1e-17 Score=216.71 Aligned_cols=281 Identities=14% Similarity=0.071 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHh-CCC-----CCcEE--EeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEE
Q psy15216 43 IEKARNEVAQLI-YAD-----PREII--WTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVT 114 (2602)
Q Consensus 43 ~~~~r~~lA~~~-g~~-----~~~Iv--~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~ 114 (2602)
..++|+.+++++ |.. +++|. .+.++++++.++...+. .+.++||+|+++.|.|+++...++.. |++++
T Consensus 81 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~-~~~~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~ 156 (409)
T 4eu1_A 81 IASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLN-RFVANCNRIYGPDVGYPNHESIFAKA---GMELT 156 (409)
T ss_dssp CHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGG-GTSSSCCEEEEESSCCTHHHHHHHHT---TCEEE
T ss_pred cHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHH-HhcCCCCEEEEeCCCcHhHHHHHHHc---CCeEE
Confidence 467888999876 665 67784 49999999988754332 22378999999999999987776655 99999
Q ss_pred Eecc--CCCCccChHHHHhhcc---CCceEEEEecccCcccccccHHH---HHHHHHhcCCEEEEecccccccc------
Q psy15216 115 YLKP--KNNGLITLSQLEEKIC---SDTILVSVMLVNNEIGVIQPILE---IGELCRSKGVIFHCDAAQAVGKI------ 180 (2602)
Q Consensus 115 ~v~~--~~~~~ld~e~l~~~i~---~~tklv~i~~~~npTG~~~~l~~---I~~la~~~g~~livD~a~a~g~~------ 180 (2602)
.++. ++++.+|+++++++++ ++++++++++|+||||.+++.++ |+++|++||+++|+|++|+....
T Consensus 157 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~ 236 (409)
T 4eu1_A 157 PYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYD 236 (409)
T ss_dssp EECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHH
T ss_pred EEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccc
Confidence 9987 3467899999999995 35678888999999999999554 89999999999999999764321
Q ss_pred --cc-cC-CCCCccEEEeccccccCCCC--cEEE--EEe-cC----CCCcccceecCCCccccccccCcchhHHHHHHHH
Q psy15216 181 --DI-NI-QNYKVDLMSFSAHKIYGPKG--IGAL--YIR-RN----PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEA 247 (2602)
Q Consensus 181 --~~-dl-~~~~~D~~~~S~~K~~Gp~G--~G~l--~~~-~~----~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~a 247 (2602)
++ .+ ......+++.|++|.+|++| +||+ ++. ++ +.+.+.... .....+++.....++..+
T Consensus 237 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 309 (409)
T 4eu1_A 237 AFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLI-------RPMYNNPPLYGAWVVSSI 309 (409)
T ss_dssp THHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHH-------HHHHSSCCHHHHHHHHHH
T ss_pred hHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHH-------hhhcCCCChHHHHHHHHH
Confidence 11 11 11233478889999999888 7987 444 33 333332211 011234555566666666
Q ss_pred HHHH------HHhHHHHHHHHHHHHHHHHHHHhhc-cCc-eEEeCCCCCCCCceEEEEEcccChhHHHHHh---CCeEEc
Q psy15216 248 FRLA------RIEMKEELKRILFLQKRLYNGLMES-IEE-IYINGDMNNRIPHNLNISFNFIEGESLLMAI---KDIAVS 316 (2602)
Q Consensus 248 l~~~------~~~~~~~~~~~~~l~~~l~~~L~~~-~~g-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L---~gI~v~ 316 (2602)
++.. ....++.++++.++++++.+.|.+. .++ +.+..+... .+.+...+.+ +...+ +||.+.
T Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~------~~~~~~~~~~-~~~~ll~~~gv~v~ 382 (409)
T 4eu1_A 310 LKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVG------MMAYTGLTRE-QVELLRSEYHIYMT 382 (409)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCS------SEEECCCCHH-HHHHHHHHHCEECC
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCce------EEEEeCCCHH-HHHHHHHcCCEEEc
Confidence 6621 2336778889999999999999772 111 333322221 1222333333 33333 488776
Q ss_pred ccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 317 SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++ .||+++.. +++++++++++|++.
T Consensus 383 p~---------------------------~Ri~~~~~-~~~~i~~~~~~l~~~ 407 (409)
T 4eu1_A 383 LN---------------------------GRAAVSGL-NSTNVEYVSQAIHNV 407 (409)
T ss_dssp TT---------------------------CEEEGGGC-CTTTHHHHHHHHHHH
T ss_pred CC---------------------------CEEEEEec-CHhhHHHHHHHHHHH
Confidence 32 48888755 456699999999863
No 462
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.74 E-value=5.2e-17 Score=209.78 Aligned_cols=228 Identities=12% Similarity=0.061 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHhcccccccCCCEEEEcC-CCCcccHHHH--------HHHHhCCc
Q psy15216 43 IEKARNEVAQLIYADPREIIW--TSGATESNNLAIKGAAHFYKKRGKHIITVQ-TEHKSVLDSI--------RKLENDGF 111 (2602)
Q Consensus 43 ~~~~r~~lA~~~g~~~~~Iv~--t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~-~~~~s~~~~~--------~~~~~~G~ 111 (2602)
.+++++.+|+++|++. .+++ ++|+++|+.+++.++. +|||+|++++ +.|+++...+ ..++..|+
T Consensus 76 ~~~Le~~lA~l~g~e~-alv~p~~~sGt~A~~~al~all----~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~ 150 (427)
T 3hvy_A 76 RDSLDRVYANIFNTES-AFVRPHFVNGTHAIGAALFGNL----RPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGV 150 (427)
T ss_dssp HHHHHHHHHHHHTCSE-EEEETTCCSHHHHHHHHHHHTC----CTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTC
T ss_pred HHHHHHHHHHHhCCCc-eEEeCCCCcHHHHHHHHHHHhc----CCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCC
Confidence 7888999999999863 2443 7889999999999987 8999999998 9999876554 33455699
Q ss_pred EEEEeccCCCCccChHHHHhhcc--CCceEEEEec----ccCcccccccHHHHHHHHHh--cCCEEEEeccccccccccc
Q psy15216 112 RVTYLKPKNNGLITLSQLEEKIC--SDTILVSVML----VNNEIGVIQPILEIGELCRS--KGVIFHCDAAQAVGKIDIN 183 (2602)
Q Consensus 112 ~v~~v~~~~~~~ld~e~l~~~i~--~~tklv~i~~----~~npTG~~~~l~~I~~la~~--~g~~livD~a~a~g~~~~d 183 (2602)
+++.++. +++.+|+++++++++ ++||+|++++ |+||||.+.|+++|+++|++ +|+++++|++|+.+.....
T Consensus 151 ~~~~v~~-~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~ 229 (427)
T 3hvy_A 151 KYKMVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKE 229 (427)
T ss_dssp EEEECCC-BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSC
T ss_pred EEEEecC-CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCC
Confidence 9999998 678899999999998 8999999999 99999999999999999999 8999999999987763223
Q ss_pred CCCCCccEEEeccccccCCC---CcEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHH
Q psy15216 184 IQNYKVDLMSFSAHKIYGPK---GIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELK 260 (2602)
Q Consensus 184 l~~~~~D~~~~S~~K~~Gp~---G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~ 260 (2602)
...+++|++++|+||.+|+. ..|++++++++++.++......+. .... .++......+...+.. .....+
T Consensus 230 p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~--g~~~-~~~~~~a~~~~~gl~~----~~~r~~ 302 (427)
T 3hvy_A 230 PTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGI--GGEC-GSTFGVMRSLYEGLFM----APHVTI 302 (427)
T ss_dssp GGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTT--GGGC-CCCTTCHHHHHHHHHH----HHHHHH
T ss_pred CcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCc--cccc-CCCHHHHHHHHHhHhH----HHHHHH
Confidence 33467899999999977652 249999998887777653210000 0011 1212212222233332 345666
Q ss_pred HHHHHHHHHHHHHhhccCceEEeCC
Q psy15216 261 RILFLQKRLYNGLMESIEEIYINGD 285 (2602)
Q Consensus 261 ~~~~l~~~l~~~L~~~~~g~~l~~~ 285 (2602)
+..+++.++.+.|.+ .++++++.
T Consensus 303 ~~~~~a~~la~~L~~--~g~~V~p~ 325 (427)
T 3hvy_A 303 EAVKGAVFCARIMEL--AGFDVLPK 325 (427)
T ss_dssp HHHHHHHHHHHHHHH--TTCEEESC
T ss_pred HHHHHHHHHHHHHHh--CCCeecCC
Confidence 778888888888877 35566543
No 463
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.73 E-value=2.5e-17 Score=221.33 Aligned_cols=286 Identities=13% Similarity=0.028 Sum_probs=187.6
Q ss_pred CCcEEEeCCHHHHHHHHHHhhhh-hhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC--CCCcChhHHHhhcc
Q psy15216 1454 PREIIWTSGATESNNLAIKGAAH-FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKIC 1530 (2602)
Q Consensus 1454 ~~~iv~t~gaT~al~~al~~l~~-~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~id~d~l~~~i~ 1530 (2602)
+++|++|+|+++++..++.++.. ..+++||+|++++|.|+.+...... ...|++++.++.++ ++.+|+++|+++++
T Consensus 165 ~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~ 243 (546)
T 2zy4_A 165 SVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPEL-AQYALEEVAINADPSLNWQYPDSELDKLKD 243 (546)
T ss_dssp GEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHS-TTSCCEEEEEECBGGGTTBCCHHHHGGGGS
T ss_pred cceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHH-cCCCcEEEEEecCcccCCCCCHHHHHHhhC
Confidence 57899999999999999988410 1137999999999999998765433 23478999998765 35689999999998
Q ss_pred CCceEEEEeccccccccccC---hHHHHHHh--hhcCCEEEEecccccCcc-cccCCC--CCccEEEEccccccCCCc--
Q psy15216 1531 SDTILVSVMLVNNEIGVIQP---ILEIGELC--RSKGVIFHCDAAQAVGKI-DINIQN--YKVDLMSFSAHKIYGPKG-- 1600 (2602)
Q Consensus 1531 ~~t~lv~l~~~~n~tG~~~~---l~~I~~ia--~~~gi~vivD~a~~~g~~-~~~l~~--~~~D~~v~S~~K~~gp~G-- 1600 (2602)
+++++|++++|+||||.++| +++|+++| ++||+++|+|++|+.... +.++.. .+..+++.|+||.+|++|
T Consensus 244 ~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~GlR 323 (546)
T 2zy4_A 244 PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGWR 323 (546)
T ss_dssp TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGGC
T ss_pred CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCcc
Confidence 99999999999999999998 56678888 789999999999874321 111111 135688999999988888
Q ss_pred eEEEEEecC-CCCcccc------------ccccCCc-cc----------------cCCCCCcchhHHHHHHH-HH-HHH-
Q psy15216 1601 IGALYIRRN-PRTRIEA------------QIHGGGH-EY----------------GLRSGTLATHQIVGMGE-AF-RLA- 1647 (2602)
Q Consensus 1601 ~G~l~~~~~-~~~~l~~------------~~~g~~~-~~----------------~~~~gt~~~~~~~al~~-aL-~~~- 1647 (2602)
+||++++++ +++.+.. .+..+.. +. .....+.+.+.+.++.. ++ .++
T Consensus 324 iG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~ 403 (546)
T 2zy4_A 324 LGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMD 403 (546)
T ss_dssp EEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHC
T ss_pred eEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHh
Confidence 899999875 4444311 1110000 00 01112344444443311 11 122
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec-----------------CCcHH-HHHhc-
Q psy15216 1648 --RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-----------------IEGES-LLMAI- 1706 (2602)
Q Consensus 1648 --~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~-----------------~~~~~-~~~~L- 1706 (2602)
....+..++.++++++.+.+.|.. ++... ++.. .-...+.++. .+..+ +...+
T Consensus 404 ~~~~~~~~~r~~~~~r~~~l~~~L~~---~~~~~-~~~~--~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~ 477 (546)
T 2zy4_A 404 EADEYKHTLKQLIRRRETTLYRELGM---PPLRD-ENAV--DYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIAD 477 (546)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHGGGTS---SCCCC-TTBC--CSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCC---CcccC-CCCe--eEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHH
Confidence 234566677777777777777731 22111 1111 1111222221 11223 23333
Q ss_pred -CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1707 -KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1707 -~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+||.+.+|..|..+ .+++||+++ ..+.+++++++++|++.
T Consensus 478 ~~gV~v~pG~~F~~~------------------~~~iRis~~-~~~~e~i~~~~~~l~~~ 518 (546)
T 2zy4_A 478 ETGIVLLPGRGFGSN------------------RPSGRASLA-NLNEYEYAAIGRALRKM 518 (546)
T ss_dssp HHSCCCEESSCTTCS------------------SCEEEEESS-SSCHHHHHHHHHHHHHH
T ss_pred HCCEEEeCccccCCC------------------CCeEEEEec-cCCHHHHHHHHHHHHHH
Confidence 79999999987542 278999997 35789999999999873
No 464
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.73 E-value=1.4e-16 Score=210.66 Aligned_cols=321 Identities=14% Similarity=0.089 Sum_probs=210.1
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
..++.+.+++.+.+.... +... ++ ..+...+++++++++++.++++|++++|+++|++.++.++.. ...++
T Consensus 59 ~~~p~v~~a~~~~~~~~~-~~~~-----~~-~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~--~~~~~ 129 (433)
T 1zod_A 59 HCHPEIVSVIGEYAGKLD-HLFS-----EM-LSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKL--VTGKY 129 (433)
T ss_dssp BTCHHHHHHHHHHHHHCC-CCCT-----TC-CCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHH--HHTCC
T ss_pred CCCHHHHHHHHHHHHhCc-cccc-----cc-CCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHH--hhCCC
Confidence 358999999999887532 1111 11 123567888999999998888999999999999999987541 12468
Q ss_pred EEEEcCCCCcccHHHHHHHHh------C---CcEEEEeccCC----CC--------ccChHHHHhhcc----CCceEEEE
Q psy15216 88 HIITVQTEHKSVLDSIRKLEN------D---GFRVTYLKPKN----NG--------LITLSQLEEKIC----SDTILVSV 142 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~------~---G~~v~~v~~~~----~~--------~ld~e~l~~~i~----~~tklv~i 142 (2602)
.|++.++.|++.......+.. . ...++.++.+. .+ .+|+++|+++++ +++++|++
T Consensus 130 ~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~ 209 (433)
T 1zod_A 130 EIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIA 209 (433)
T ss_dssp EEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEE
T ss_pred eEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 999999988876544332210 0 01234443321 11 246999999986 56777777
Q ss_pred ecccCccccccc----HHHHHHHHHhcCCEEEEecccc-ccccc----ccCCCCCccEEEeccccccCC-CCcEEEEEec
Q psy15216 143 MLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHKIYGP-KGIGALYIRR 212 (2602)
Q Consensus 143 ~~~~npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~~----~dl~~~~~D~~~~S~~K~~Gp-~G~G~l~~~~ 212 (2602)
+.++||||.+.+ +++|.++|++||+++|+|++|+ ++... ++.....+|++ |++|.+|+ -.+|++++++
T Consensus 210 ~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~G~~ig~~~~~~ 287 (433)
T 1zod_A 210 EPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGAGLPLAAIVTSA 287 (433)
T ss_dssp CSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHTTSSCEEEEECH
T ss_pred ccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEE--EecccccCCCCeeEEEEhH
Confidence 666788998776 9999999999999999999998 44221 12123346765 67796654 2389999998
Q ss_pred CCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc---cCceEEeCCCCCC
Q psy15216 213 NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNR 289 (2602)
Q Consensus 213 ~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~g~~l~~~~~~~ 289 (2602)
++++.+.+... ......+.+..+.+++.++++.... +...++.++++++++++|.+. .+.+....+.
T Consensus 288 ~~~~~~~~~~~-----~~~~t~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~--- 357 (433)
T 1zod_A 288 AIEERAHELGY-----LFYTTHVSDPLPAAVGLRVLDVVQR--DGLVARANVMGDRLRRGLLDLMERFDCIGDVRGR--- 357 (433)
T ss_dssp HHHHHHHHTTC-----CCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE---
T ss_pred HHHHhhccCCC-----CCCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE---
Confidence 77666644110 0001234466677777788875443 245667777777787777652 2443332221
Q ss_pred CCceEEEEEccc---------ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHH
Q psy15216 290 IPHNLNISFNFI---------EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 358 (2602)
Q Consensus 290 ~~~~~~~~~~~~---------~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~ed 358 (2602)
..++.+.++.. ...++...| +||.++++..+.. .+++||+++...+++|
T Consensus 358 -g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~-------------------~~~lRi~~~~~~t~~~ 417 (433)
T 1zod_A 358 -GLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGM-------------------GGVFRIAPPLTVSEDE 417 (433)
T ss_dssp -TTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTS-------------------CCEEEECCCTTCCHHH
T ss_pred -EEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCC-------------------CCEEEEECCcCCCHHH
Confidence 23334444421 134566655 7999987753321 2789999988899999
Q ss_pred HHHHHHHHHhh
Q psy15216 359 IDFTIKLLKMK 369 (2602)
Q Consensus 359 id~li~~L~~~ 369 (2602)
+++++++|++.
T Consensus 418 i~~~l~~l~~~ 428 (433)
T 1zod_A 418 IDLGLSLLGQA 428 (433)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999864
No 465
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.73 E-value=4.1e-17 Score=215.35 Aligned_cols=327 Identities=13% Similarity=0.049 Sum_probs=196.3
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccc----c
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK----K 84 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~----~ 84 (2602)
.+|.+.+++.+.+.....+... ....+...+++++++++++.++++|++++|+++|+..++.++..... .
T Consensus 46 ~~p~v~~a~~~~~~~~~~~~~~------~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~ 119 (430)
T 3i4j_A 46 GRAEVGERMAAQAARLPFVHGS------QFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEP 119 (430)
T ss_dssp CCHHHHHHHHHHHHHCCCCCTT------TCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHhccccccc------ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 4899999999988763211111 11224567889999999998888999999999999999998762100 2
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHhCCc------------EEEEeccCCC---CccChHHHHhhcc----CCceEEEEecc
Q psy15216 85 RGKHIITVQTEHKSVLDSIRKLENDGF------------RVTYLKPKNN---GLITLSQLEEKIC----SDTILVSVMLV 145 (2602)
Q Consensus 85 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~------------~v~~v~~~~~---~~ld~e~l~~~i~----~~tklv~i~~~ 145 (2602)
+++.|++.++.|+.+......+..... .+..++.+.. +..|+++|+++++ +++++|++..+
T Consensus 120 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~ 199 (430)
T 3i4j_A 120 GRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPV 199 (430)
T ss_dssp TCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSS
T ss_pred CCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 478999999999987654443311100 2223332222 2346789999886 45567777676
Q ss_pred cC-ccccccc----HHHHHHHHHhcCCEEEEecccc-cccc--c--ccCC-CCCccEEEeccccccCCCC---cEEEEEe
Q psy15216 146 NN-EIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI--D--INIQ-NYKVDLMSFSAHKIYGPKG---IGALYIR 211 (2602)
Q Consensus 146 ~n-pTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~--~--~dl~-~~~~D~~~~S~~K~~Gp~G---~G~l~~~ 211 (2602)
+| ++|.+.+ +++|.++|++||+++|+|++|+ ++.. . .+.. ...+|+++ ++|.+|. | +|+++++
T Consensus 200 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t--~sK~l~~-G~~r~G~~~~~ 276 (430)
T 3i4j_A 200 VGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAV--LGKGLAA-GYAPLAGLLAA 276 (430)
T ss_dssp CCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEE--ECGGGTT-TSSCCEEEEEC
T ss_pred ccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEE--EcccccC-CccccEEEEEC
Confidence 77 8998887 9999999999999999999987 4321 1 1112 33467664 6696664 4 7999999
Q ss_pred cCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh---ccCceEEeCCCCC
Q psy15216 212 RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME---SIEEIYINGDMNN 288 (2602)
Q Consensus 212 ~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~---~~~g~~l~~~~~~ 288 (2602)
+++++.+.+..... ......+.+..+.+++.++|+.... ++..++.+++.+++++.|.+ .++++....+.
T Consensus 277 ~~i~~~~~~~~~~~---~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-- 349 (430)
T 3i4j_A 277 PQVYETVMGGSGAF---MHGFTYAGHPVSVAAGLSVLDIVER--EDLTGAAKERGAQLLAGLQALQARFPQMMQVRGT-- 349 (430)
T ss_dssp HHHHHHHHHTTCBC---CCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE--
T ss_pred HHHHHHHhccCCcc---cccCCCCCCHHHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE--
Confidence 88777665420000 0011235566777777788875432 23344444444444444433 24555544322
Q ss_pred CCCceEEEEEccc----------ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCH
Q psy15216 289 RIPHNLNISFNFI----------EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTE 356 (2602)
Q Consensus 289 ~~~~~~~~~~~~~----------~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~ 356 (2602)
..+..+.+... ...++...| +||.++++..+..+ ...+++||+++...++
T Consensus 350 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~----------------~~~~~iRi~~~~~~t~ 411 (430)
T 3i4j_A 350 --GLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPN----------------GRGDHLLLGPPLSITA 411 (430)
T ss_dssp --TTEEEEEEC------------CHHHHHHHHHHTTEECC---------------------------CEEEECCCTTCCH
T ss_pred --EEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCC----------------CCCCEEEEECCCCCCH
Confidence 12333444321 124455555 79999876422211 1137899999988999
Q ss_pred HHHHHHHHHHHhh
Q psy15216 357 KEIDFTIKLLKMK 369 (2602)
Q Consensus 357 edid~li~~L~~~ 369 (2602)
+++++++++|++.
T Consensus 412 e~i~~~l~~l~~~ 424 (430)
T 3i4j_A 412 AEVDGLLALLAGA 424 (430)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999964
No 466
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.72 E-value=2.6e-16 Score=206.47 Aligned_cols=307 Identities=15% Similarity=0.178 Sum_probs=207.1
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhc---c
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK---K 1480 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~---~ 1480 (2602)
..++.+.+++.+.++... +... .+ ..+...++++++++++| .++++|++|+++|+..++.++..... .
T Consensus 73 ~~~p~v~~ai~~~~~~~~-~~~~-~~-----~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~~al~~~~~~~~~~~~ 143 (420)
T 2pb2_A 73 HCHPALVEALKSQGETLW-HTSN-VF-----TNEPALRLGRKLIDATF--AERVLFMNSGTEANETAFKLARHYACVRHS 143 (420)
T ss_dssp BTCHHHHHHHHHHHTTCC-CCCT-TS-----CCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHhcc-cccC-cc-----CCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHHHHHHHHHHHhhhccC
Confidence 357889999999887532 2211 11 12457889999999998 46899999999999999998761100 0
Q ss_pred CC-CEEEEcCCCCcchHHHHHHHHhCCcE------------EEEeccCCCCCcChhHHHhhccCCceEEEEecccccccc
Q psy15216 1481 RG-KHIITVQTEHKSVLDSIRKLENDGFR------------VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGV 1547 (2602)
Q Consensus 1481 ~g-d~Vlv~~~~~~s~~~~~~~~~~~G~~------------v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~ 1547 (2602)
+| ++|+++++.|++....+..+ .|.. +..++. .|+++|++++++++++|++++++|++|.
T Consensus 144 ~g~~~vi~~~~~yh~~~~~~~~~--~g~~~~~~~~~p~~~~~~~~~~-----~d~~~le~~i~~~~~~vi~~p~~~~gG~ 216 (420)
T 2pb2_A 144 PFKTKIIAFHNAFHGRSLFTVSV--GGQPKYSDGFGPKPADIIHVPF-----NDLHAVKAVMDDHTCAVVVEPIQGEGGV 216 (420)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHH--SSCHHHHTTSSSCCSCEEEECT-----TCHHHHHHHCCTTEEEEEECSEETTTTS
T ss_pred CCCCEEEEEeCCcCCcCHHHHHh--cCCccccccCCCCCCCeEEecC-----CCHHHHHHHhccCceEEEEeCCcCCCCe
Confidence 56 59999999987764433222 1221 444443 3899999999999999999999998886
Q ss_pred -c---cChHHHHHHhhhcCCEEEEecccc-cCcc--c--ccCCCCCccEEEEccccccCCCc--eEEEEEecCCCCcccc
Q psy15216 1548 -I---QPILEIGELCRSKGVIFHCDAAQA-VGKI--D--INIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEA 1616 (2602)
Q Consensus 1548 -~---~~l~~I~~ia~~~gi~vivD~a~~-~g~~--~--~~l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~ 1616 (2602)
+ .++++|.++|++||+++|+|++|+ ++.. . ++.....+|++ |++|.+| .| +|++++++++++.+.+
T Consensus 217 ~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l~-~G~~iG~~~~~~~l~~~l~~ 293 (420)
T 2pb2_A 217 QAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKALG-GGFPVSAMLTTQEIASAFHV 293 (420)
T ss_dssp EECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TTSCCEEEEECHHHHTTCC-
T ss_pred ecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--Eeccccc-CCCceEEEEEhHHHHHhhcC
Confidence 2 348999999999999999999995 2211 1 11223357877 5679665 24 8999999876665543
Q ss_pred ccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCcEEEeCCCCCCCCceEEEE
Q psy15216 1617 QIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNIS 1693 (2602)
Q Consensus 1617 ~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~gl~i~~~~~~~~~~~~~~~ 1693 (2602)
...+ ...+.+...+.++.++|+.... ++..++.+++++++.+.|.+. .+.+....+ ...+..+.
T Consensus 294 ~~~~-------~t~~~~~~~~aa~~a~L~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~g~~~~v~ 360 (420)
T 2pb2_A 294 GSHG-------STYGGNPLACAVAGAAFDIINT--PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRG----MGLLIGAE 360 (420)
T ss_dssp ---C-------CEECCCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE----ETTEEEEE
T ss_pred CCcC-------cccCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe----cceEEEEE
Confidence 2111 1123455666666677775432 456777888888888888662 233322211 12334455
Q ss_pred EecC---CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1694 FNFI---EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1694 ~~~~---~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
++.. +..++...| +||.++++. + +++||+++...|.+|+++++++|++.
T Consensus 361 ~~~~~~~~~~~l~~~l~~~Gi~v~~~~----~-------------------~~iRl~~~~~~t~eei~~~~~~l~~~ 414 (420)
T 2pb2_A 361 LKPKYKGRARDFLYAGAEAGVMVLNAG----A-------------------DVMRFAPSLVVEEADIHEGMQRFAQA 414 (420)
T ss_dssp ECGGGTTCHHHHHHHHHHTTEECEESS----T-------------------TEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ECCCchHHHHHHHHHHHHCCCEEEeCC----C-------------------CEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 5432 345666665 799887652 1 68999998889999999999999874
No 467
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.72 E-value=1.7e-16 Score=195.68 Aligned_cols=355 Identities=13% Similarity=0.170 Sum_probs=226.6
Q ss_pred CcccHHHHHHHHHhcCCCccccceeeeeceeeeccCCCCCCCHHHHHHHHHHHhhcc--CCCCCccchhHHHHHHHHHHH
Q psy15216 1365 SPSKFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKA 1442 (2602)
Q Consensus 1365 ~~~~~~~v~~aL~~~g~~~~~~ei~~iP~~~v~L~~~~~~~~~~v~eal~~~l~~~~--~np~~~~~~~~~~~~~~~~~l 1442 (2602)
||+-+..+.+.++.+ ...|.+++.. .-.++.+++++-..+.+.+ |+|+...|........+..-+
T Consensus 39 Dpei~~~i~~E~~RQ-----~~~ieLIASE--------N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la 105 (490)
T 3ou5_A 39 DPEMWELLQREKDRQ-----CRGLELIASE--------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLC 105 (490)
T ss_dssp CHHHHHHHHHHHHHH-----HHSEECCTTC--------CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH-----HcCceEecCC--------CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHH
Confidence 466666666655432 3445666643 3556789999999998854 788876666555666677778
Q ss_pred HHHHHHHhCCCCCc--EEEe-CCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHH-----HHHhCCcEEEEe--
Q psy15216 1443 RNEVAQLIYADPRE--IIWT-SGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR-----KLENDGFRVTYL-- 1512 (2602)
Q Consensus 1443 r~~ia~~~g~~~~~--iv~t-~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~-----~~~~~G~~v~~v-- 1512 (2602)
+++.+++||+++.. |=+. .|++.|+..++.+++ +|||+|+..+..|..+..... .....|.-+..+
T Consensus 106 ~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All----~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y 181 (490)
T 3ou5_A 106 QRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALL----QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY 181 (490)
T ss_dssp HHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHC----C-CCCEECBC----------------------------CB
T ss_pred HHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHc----CCCCEEEecccCCCCcccccccCCCccccccccccccccc
Confidence 88999999998763 2223 488999999999998 999999999999888765431 111223333333
Q ss_pred ccCC-CCCcChhHHHhhcc-CCceEEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCc-----ccccCCCCCc
Q psy15216 1513 KPKN-NGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGK-----IDINIQNYKV 1585 (2602)
Q Consensus 1513 ~~~~-~~~id~d~l~~~i~-~~t~lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~-----~~~~l~~~~~ 1585 (2602)
.+++ ++.||+|++++... .++++|++-.-. .-..+|++++.+||++.|+++++|.||..|. .|-++. .+
T Consensus 182 ~vd~~t~~IDyd~~~~~A~~~kPklIi~G~Sa--Y~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~--~A 257 (490)
T 3ou5_A 182 KLNPKTGLIDYNQLALTARLFRPRLIIAGTSA--YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HA 257 (490)
T ss_dssp CEETTTTEECHHHHHHHHHHHCCSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG--TC
T ss_pred ccCCCCCcccHHHHHHHHhhcCCCeEEECCcc--CccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccc--cc
Confidence 3453 57899999999886 478887775433 3356799999999999999999999997654 333333 27
Q ss_pred cEEEEcccc-ccCCCceEEEEEecCC---------------CCccccccccCCccccCCCCCcchhHHHHHHHHHHH-HH
Q psy15216 1586 DLMSFSAHK-IYGPKGIGALYIRRNP---------------RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-AR 1648 (2602)
Q Consensus 1586 D~~v~S~~K-~~gp~G~G~l~~~~~~---------------~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~-~~ 1648 (2602)
|++++|.|| +.||+| |+++.+++. .+++....+.| ..|.|..+.++|.+.|+.. ..
T Consensus 258 DvVTtTTHKTLrGPrG-G~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg------~qggp~~h~IAAkAVaf~Ea~~ 330 (490)
T 3ou5_A 258 DIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPS------LQGGPHNHAIAAVAVALKQACT 330 (490)
T ss_dssp SEEEEESSSTTCSCSC-EEEEEECSEEEECC--CCEEECCCHHHHHHHHTTT------TCSSCCHHHHHHHHHHHHHHHS
T ss_pred eEEeccccccccCCCc-eEEEeccccccccccccchhHHHHHHHHHhhcCcc------ccccchHHHHHHHHHHHHHHHh
Confidence 999999999 889997 999988742 22233333323 2367888999999888873 55
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEec--CCcHHHHHhc--CCEEEccccccCCCCCCh
Q psy15216 1649 IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESLLMAI--KDIAVSSGSACTSASLEP 1724 (2602)
Q Consensus 1649 ~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~L--~gI~v~~g~~~~~~~~~~ 1724 (2602)
..+..+.++...+++.|.+.|.+ .|+.+..-. .-.++..+.+.. ..+......| .+|.+.....+...
T Consensus 331 p~fk~Ya~qVv~NAkaLA~~L~~--~G~~vvsGg--TdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~---- 402 (490)
T 3ou5_A 331 PMFREYSLQVLKNARAMADALLE--RGYSLVSGG--TDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDR---- 402 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGS--CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCC----
T ss_pred HhHHHHHHHHHHHHHHHHHHHHh--CCCeeecCC--CCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCC----
Confidence 66889999999999999999988 688887422 223444454432 3444444444 68877643322211
Q ss_pred hHHHHHcCCCccccCCeEEEecCC----CCCHHHHHHHHHHHHHh
Q psy15216 1725 SYVLRALGCNDELAHSSIRFTIGR----FTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1725 ~~~~~~~~~~~~~~~~~iRls~~~----~~t~edid~li~~L~~~ 1765 (2602)
.....+.|||+... -..++|++.+.+.|.+.
T Consensus 403 ----------sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~ 437 (490)
T 3ou5_A 403 ----------SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEG 437 (490)
T ss_dssp ----------CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHH
Confidence 11224789998543 35779999998888763
No 468
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.72 E-value=5e-16 Score=204.61 Aligned_cols=308 Identities=15% Similarity=0.139 Sum_probs=210.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccccc-----c
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY-----K 83 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~-----~ 83 (2602)
.+|.+.+++.+.+.... .... .+ ..+...++++++++++| .+++++++|+++|+..++.++.... .
T Consensus 93 ~~p~v~~Ai~~~~~~~~-~~~~-~~-----~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~al~~~~~~~~~~~g~ 163 (439)
T 2oat_A 93 CHPKIVNALKSQVDKLT-LTSR-AF-----YNNVLGEYEEYITKLFN--YHKVLPMNTGVEAGETACKLARKWGYTVKGI 163 (439)
T ss_dssp TCHHHHHHHHHHHTTCS-CCCT-TS-----EESSHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHhcC-cccC-cc-----CCHHHHHHHHHHHHhcC--CCEEEEeCCHHHHHHHHHHHHHHHhhhccCC
Confidence 78999999999886532 1111 11 12346788899999997 4689999999999999998865110 1
Q ss_pred cCC-CEEEEcCCCCcccHH-HHHHHH----hCC-----cEEEEeccCCCCccChHHHHhhc-cCCceEEEEecccCcccc
Q psy15216 84 KRG-KHIITVQTEHKSVLD-SIRKLE----NDG-----FRVTYLKPKNNGLITLSQLEEKI-CSDTILVSVMLVNNEIGV 151 (2602)
Q Consensus 84 ~~g-d~Vlv~~~~~~s~~~-~~~~~~----~~G-----~~v~~v~~~~~~~ld~e~l~~~i-~~~tklv~i~~~~npTG~ 151 (2602)
.+| |+|++.++.|++... ++.... +.+ ..+..++. .|+++|++++ ++++++|++..+++++|.
T Consensus 164 ~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~~~vi~ep~~~~~G~ 238 (439)
T 2oat_A 164 QKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-----NDLPALERALQDPNVAAFMVEPIQGEAGV 238 (439)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-----SCHHHHHHHTTSTTEEEEEECSSBTTTTS
T ss_pred CCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-----CCHHHHHHHhCCCCEEEEEEECCCCCCCC
Confidence 356 899999998877543 332211 001 34555553 2899999999 477888888887788998
Q ss_pred cc----cHHHHHHHHHhcCCEEEEecccc-cccc--c--ccCCCCCccEEEeccccccCCCC---cEEEEEecCCCCccc
Q psy15216 152 IQ----PILEIGELCRSKGVIFHCDAAQA-VGKI--D--INIQNYKVDLMSFSAHKIYGPKG---IGALYIRRNPRTRIE 219 (2602)
Q Consensus 152 ~~----~l~~I~~la~~~g~~livD~a~a-~g~~--~--~dl~~~~~D~~~~S~~K~~Gp~G---~G~l~~~~~~~~~l~ 219 (2602)
+. ++++|.++|++||+++|+|++|. ++.. . ++.....+|++ |++|.+|. | +|++++++++++.+.
T Consensus 239 ~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~ 315 (439)
T 2oat_A 239 VVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALSG-GLYPVSAVLCDDDIMLTIK 315 (439)
T ss_dssp BCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTSC
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE--EecccccC-CCCCeEEEEECHHHHhccC
Confidence 77 69999999999999999999995 3211 1 12223347876 77896653 4 899999988777765
Q ss_pred ceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc-cCceEEeCCCCCCCCceEEEEE
Q psy15216 220 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES-IEEIYINGDMNNRIPHNLNISF 298 (2602)
Q Consensus 220 ~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~-~~g~~l~~~~~~~~~~~~~~~~ 298 (2602)
+...+ ...+.+..+.+++.++++.... ++..++..++.+++.+.|.+. ++.+....+ ...+..+.+
T Consensus 316 ~~~~~-------~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~----~g~~~~v~l 382 (439)
T 2oat_A 316 PGEHG-------STYGGNPLGCRVAIAALEVLEE--ENLAENADKLGIILRNELMKLPSDVVTAVRG----KGLLNAIVI 382 (439)
T ss_dssp TTSSC-------CSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEE----ETTEEEEEE
T ss_pred CCCcc-------cCCCcCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEe----eeeEEEEEE
Confidence 42211 1224556666667778875543 356788889999999999772 121111111 123444555
Q ss_pred ccc---ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 299 NFI---EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 299 ~~~---~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+.. +..++...| +||.++++. .+++|++++..++++|+++++++|++.
T Consensus 383 ~~~~~~~~~~l~~~l~~~Gv~v~~~~-----------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~ 435 (439)
T 2oat_A 383 KETKDWDAWKVCLRLRDNGLLAKPTH-----------------------GDIIRFAPPLVIKEDELRESIEIINKT 435 (439)
T ss_dssp CCCSSCCHHHHHHHHHHTTEECCBSS-----------------------SSEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ecCccHHHHHHHHHHHHCCeEEecCC-----------------------CCEEEEECccCCCHHHHHHHHHHHHHH
Confidence 432 355666666 799887521 278999998889999999999999864
No 469
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.72 E-value=9.5e-18 Score=224.13 Aligned_cols=330 Identities=17% Similarity=0.153 Sum_probs=205.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccc
Q psy15216 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (2602)
Q Consensus 1 Ld~a~~~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~ 80 (2602)
||++++.++ +.+.+++.+.+... .. .|. ..+...++++++++++|. +++++++|+|+|+++++.++.
T Consensus 44 lD~~~~~~~-~~v~~a~~~~l~~~--~~---~y~----~~~~~~~l~~~la~~~~~--~~v~~t~~gt~A~~~al~~~~- 110 (467)
T 2oqx_A 44 IDLLTDSGT-GAVTQSMQAAMMRG--DE---AYS----GSRSYYALAESVKNIFGY--QYTIPTHQGRGAEQIYIPVLI- 110 (467)
T ss_dssp EECSCCSSC-SCCCHHHHHHTTSC--CC---CSS----SCHHHHHHHHHHHHHHCC--SEEEEEC--CCSHHHHHHHHH-
T ss_pred EecccCCCc-HHHHHHHHHHhccC--cc---eec----cCchhHHHHHHHHHHhCc--CcEEEcCCcHHHHHHHHHHHh-
Confidence 466666655 77788888776421 10 111 112467889999999986 589999999999999999987
Q ss_pred ccccC-----C----CEEEEcCCCCcc-cHHHHHHHHhCCcEEEEe------ccC----CCCccChHHHHhhcc----CC
Q psy15216 81 FYKKR-----G----KHIITVQTEHKS-VLDSIRKLENDGFRVTYL------KPK----NNGLITLSQLEEKIC----SD 136 (2602)
Q Consensus 81 ~~~~~-----g----d~Vlv~~~~~~s-~~~~~~~~~~~G~~v~~v------~~~----~~~~ld~e~l~~~i~----~~ 136 (2602)
++ | |+|+++ ..|.. +...+. ..|+.+... +.+ .++.+|+++|+++++ ++
T Consensus 111 ---~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~ 183 (467)
T 2oqx_A 111 ---KKREQEKGLDRSKMVAFS-NYFFDTTQGHSQ---INGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNN 183 (467)
T ss_dssp ---HHHHHHHCCCTTTCEEEE-SSCCHHHHHHHH---HTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGG
T ss_pred ---ccccccCCCCccceEEec-ccccccchhhhh---ccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCc
Confidence 56 7 888877 44533 222222 236665543 112 345789999999997 47
Q ss_pred ceEEEEecccCcc-ccccc---HHHHHHHHHhcCCEEEEeccccc-----------ccccccCCC------CCccEEEec
Q psy15216 137 TILVSVMLVNNEI-GVIQP---ILEIGELCRSKGVIFHCDAAQAV-----------GKIDINIQN------YKVDLMSFS 195 (2602)
Q Consensus 137 tklv~i~~~~npT-G~~~~---l~~I~~la~~~g~~livD~a~a~-----------g~~~~dl~~------~~~D~~~~S 195 (2602)
|++|++++++||+ |.++| +++|.++|++||+++|+|++|+. +....+... ..+|++++|
T Consensus 184 ~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s 263 (467)
T 2oqx_A 184 VPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMS 263 (467)
T ss_dssp CCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEE
T ss_pred eeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEe
Confidence 9999999999998 88766 67899999999999999988766 222222211 236788999
Q ss_pred cccccCCC-CcEEEEEecC-CCC---ccccee-cCCCccccccccCcchhHHHHHHHHHHHHHHhH-HHHHHHHHHHHHH
Q psy15216 196 AHKIYGPK-GIGALYIRRN-PRT---RIEAQI-HGGGHEYGLRSGTLATHQIVGMGEAFRLARIEM-KEELKRILFLQKR 268 (2602)
Q Consensus 196 ~~K~~Gp~-G~G~l~~~~~-~~~---~l~~~~-~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~-~~~~~~~~~l~~~ 268 (2602)
+||.+|++ | |+++.+++ +++ .+++.. .+++. ...++.+...+.++..++ .... +...++..+++++
T Consensus 264 ~sK~~g~~~G-g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~al~~~l---~~~~~~~~~~~~~~~~~~ 336 (467)
T 2oqx_A 264 AKKDAMVPMG-GLLCMKDDSFFDVYTECRTLCVVQEGF---PTYGGLEGGAMERLAVGL---YDGMNLDWLAYRIAQVQY 336 (467)
T ss_dssp SSSTTCCSSC-EEEEECSGGGHHHHHHHHHHHHHTTSS---CCCCCCCHHHHHHHHHHH---HHTTCHHHHHHHHHHHHH
T ss_pred cccccCCCCc-eEEEecChhHHHHHHHHHHhhhccCCc---ccccchhhhHHHHHHHhh---HhhhhHHHHHHHHHHHHH
Confidence 99988766 5 78887765 333 333321 11111 112333333333332222 2222 2344556778888
Q ss_pred HHHHHhhccCceEEeCCCCCCCCceEEEEEc----ccChhH-----HHHHh---CCeEEcccccCCCCCCChHHHHHHcC
Q psy15216 269 LYNGLMESIEEIYINGDMNNRIPHNLNISFN----FIEGES-----LLMAI---KDIAVSSGSACTSASLEPSYVLRALG 336 (2602)
Q Consensus 269 l~~~L~~~~~g~~l~~~~~~~~~~~~~~~~~----~~~~~~-----~~~~L---~gI~v~~g~~~~~~~~~~~~~~~~~g 336 (2602)
+.+.|.+ . ++.+. +.. ..++.+.++ ..+..+ +...| +||.+.++..|..+. .+. .|
T Consensus 337 l~~~L~~-~-~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~-~~~-----~g 404 (467)
T 2oqx_A 337 LVDGLEE-I-GVVCQ-QAG---GHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGR-DPK-----TG 404 (467)
T ss_dssp HHHHHHH-T-TCCEE-EEC---SSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCB-CTT-----TC
T ss_pred HHHHHHH-C-CCeee-cCC---ceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccc-ccc-----cc
Confidence 9999977 3 66655 322 234445553 223222 24444 599998754432110 000 01
Q ss_pred CCccCCCCeEEEecCCC-CCHHHHHHHHHHHHhh
Q psy15216 337 CNDELAHSSIRFTIGRF-TTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 337 ~~~~~~~~~iRis~~~~-~t~edid~li~~L~~~ 369 (2602)
.......++||++++.. ++++|+++++++|++.
T Consensus 405 ~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~ 438 (467)
T 2oqx_A 405 KQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHV 438 (467)
T ss_dssp SBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHH
T ss_pred ccccCccCeEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 11112247899999988 9999999999999864
No 470
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.72 E-value=1.6e-16 Score=205.48 Aligned_cols=340 Identities=13% Similarity=0.044 Sum_probs=213.4
Q ss_pred cccHHHHHHHHHhc-CCCccccceeeeeceeeeccCCCCCCCHHHHHHHHHHH-hh--ccCCCCCccchhHHHHHHHHHH
Q psy15216 1366 PSKFIEIKNSLEMT-GFKAESSGIVMRPYTNIVFKDATTPIDPRVVDKMIPYL-RV--QFGNPASRNHIYGWTAEKAIEK 1441 (2602)
Q Consensus 1366 ~~~~~~v~~aL~~~-g~~~~~~ei~~iP~~~v~L~~~~~~~~~~v~eal~~~l-~~--~~~np~~~~~~~~~~~~~~~~~ 1441 (2602)
|+.+.++.+.+++. ..++.+..++..|+. +...+.++.+.++.. .+ +. ...|+.. ....+
T Consensus 13 ~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~-----~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~----------~G~~~ 76 (405)
T 3k7y_A 13 VDNILKTAREFKEDTCEEKINLSIGVCCND-----DGDLHIFDSVLNADK-LVTENYKEKPYLLG----------NGTED 76 (405)
T ss_dssp CCHHHHHHHHHTTSSCSSCEECSCSSCBCT-----TSSBCCCHHHHHHHH-HHHHHCCCCCCCTT----------SSCHH
T ss_pred CChHHHHHHHHhcCCCcCcEEeeeeeeECC-----CCCCcccHHHHHHHH-HhcCCCCCCCCCCC----------CCcHH
Confidence 44456666666553 234455555532211 112355677888776 43 22 1122221 12467
Q ss_pred HHHHHHHHh-CC-----CCCc--EEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEec
Q psy15216 1442 ARNEVAQLI-YA-----DPRE--IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLK 1513 (2602)
Q Consensus 1442 lr~~ia~~~-g~-----~~~~--iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~ 1513 (2602)
+|+++++++ +. ++++ +++|+|+++|+.+++..+.. +.+ |+|++++|.|+.+...++.+ |++++.++
T Consensus 77 lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~--~~~-d~Vlv~~P~y~~~~~~~~~~---g~~~~~v~ 150 (405)
T 3k7y_A 77 FSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKM--LNV-ETLYVTNPPYINHVNMIESR---GFNLKYIN 150 (405)
T ss_dssp HHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHT--TTC-CEEEEESSCCHHHHHHHHTT---TCEEEEEC
T ss_pred HHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHh--cCC-CEEEEeCCCCHhHHHHHHHc---CCeEEEEe
Confidence 888888877 22 3344 58999999999999998871 128 99999999999988776655 99999998
Q ss_pred c-CC-CCCcChhHHHhhcc--CCceEEEEecc-ccccccccC---hHHHHHHhhhcCCEEEEecccccCcc--------c
Q psy15216 1514 P-KN-NGLITLSQLEEKIC--SDTILVSVMLV-NNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI--------D 1577 (2602)
Q Consensus 1514 ~-~~-~~~id~d~l~~~i~--~~t~lv~l~~~-~n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~--------~ 1577 (2602)
. ++ ++.+|+++++++++ +++++++++.+ |||||.+++ +++|+++|++||+++|+|++|.--.. +
T Consensus 151 ~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~ 230 (405)
T 3k7y_A 151 FFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLL 230 (405)
T ss_dssp CEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHH
T ss_pred ccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHH
Confidence 7 33 47799999999997 46778888765 899999999 66788899999999999999752110 0
Q ss_pred c-cC-CCCCccEEEEccccccCCCc--eEEEEEe---cCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHH---
Q psy15216 1578 I-NI-QNYKVDLMSFSAHKIYGPKG--IGALYIR---RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--- 1647 (2602)
Q Consensus 1578 ~-~l-~~~~~D~~v~S~~K~~gp~G--~G~l~~~---~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~--- 1647 (2602)
+ .+ .....-+++.||+|.||++| +||+++. +++++.+....... .+....+++...+.++..+|...
T Consensus 231 ~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~~~~~~l~~~~l~ 307 (405)
T 3k7y_A 231 IRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFI---VRKFYSSPVIHTNRILCQLLNNQNLK 307 (405)
T ss_dssp HHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHH---HHTTTSSCCHHHHHHHHHHHHCHHHH
T ss_pred HHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHH---HhcccCCCcHHHHHHHHHHhCCHHHH
Confidence 1 11 11123477789999998888 8999762 22222222111000 00112234555555555666521
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHh----hcC-C-cEEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccc
Q psy15216 1648 ---RIEMKEELKRILFLQKRLYNGLM----ESI-E-EIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSA 1716 (2602)
Q Consensus 1648 ---~~~~~~~~~~~~~l~~~l~~~L~----~~~-~-gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~ 1716 (2602)
...+...+++++++++++.+.|. +.. + ++.+..+ ...+|.+...+. +++..| +||.+.++
T Consensus 308 ~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p------~gg~f~~~~l~~-~~~~~L~~~gV~v~p~-- 378 (405)
T 3k7y_A 308 LNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKK------QRGLFSFVPLLA-KIAEHLKTHHIYIINN-- 378 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSS------CCSSEEECGGGG-GGTTTTTTTTEECCTT--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccC------CceEEEecCCCH-HHHHHHHHCCEeecCC--
Confidence 23356677788999999999998 621 1 1222222 222244433332 223333 57776531
Q ss_pred cCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1717 CTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1717 ~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+ |||++.. +.++|++++++|++.
T Consensus 379 -----------------------~--Ris~a~~-~~~~i~~~~~~i~~~ 401 (405)
T 3k7y_A 379 -----------------------G--RINVSGI-TKNNVDYIADKICLS 401 (405)
T ss_dssp -----------------------S--EEEGGGC-CTTHHHHHHHHHHHH
T ss_pred -----------------------C--eEEEecc-CHHHHHHHHHHHHHH
Confidence 2 9998643 558999999999974
No 471
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.71 E-value=9.8e-17 Score=207.21 Aligned_cols=253 Identities=14% Similarity=0.092 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHhh--ccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHhhhhhhccCC
Q psy15216 1407 PRVVDKMIPYLRV--QFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIW--TSGATESNNLAIKGAAHFYKKRG 1482 (2602)
Q Consensus 1407 ~~v~eal~~~l~~--~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~--t~gaT~al~~al~~l~~~~~~~g 1482 (2602)
.++++++.+.... .+.+ .. .|.++.. ...++++.+++++|++. .+++ ++|+|+|+..++.+++ +||
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~-~~-gy~Y~~~---g~~~Le~~lA~l~g~e~-alv~p~~~sGt~A~~~al~all----~pG 116 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTN-SS-GYGYNDI---GRDSLDRVYANIFNTES-AFVRPHFVNGTHAIGAALFGNL----RPN 116 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCC-CC-TTCTTCH---HHHHHHHHHHHHHTCSE-EEEETTCCSHHHHHHHHHHHTC----CTT
T ss_pred HHHHHHHHHHHHHHHhccc-Cc-CCCCCch---hHHHHHHHHHHHhCCCc-eEEeCCCCcHHHHHHHHHHHhc----CCC
Confidence 4677777765432 1222 21 2333322 27888999999999763 2433 7899999999999987 899
Q ss_pred CEEEEcC-CCCcchHHHH--------HHHHhCCcEEEEeccCCCCCcChhHHHhhcc--CCceEEEEec----ccccccc
Q psy15216 1483 KHIITVQ-TEHKSVLDSI--------RKLENDGFRVTYLKPKNNGLITLSQLEEKIC--SDTILVSVML----VNNEIGV 1547 (2602)
Q Consensus 1483 d~Vlv~~-~~~~s~~~~~--------~~~~~~G~~v~~v~~~~~~~id~d~l~~~i~--~~t~lv~l~~----~~n~tG~ 1547 (2602)
|+|++++ +.|+.+...+ ..+...|++++.++. +++.+|+++++++++ ++|++|++++ |+||||.
T Consensus 117 D~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~ 195 (427)
T 3hvy_A 117 DTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLR 195 (427)
T ss_dssp CEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCC
T ss_pred CEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCcccc
Confidence 9999998 9998876544 334455999999998 678899999999999 8999999999 9999999
Q ss_pred ccChHHHHHHhhh--cCCEEEEecccccCcccccCCCCCccEEEEccccccCC----CceEEEEEecCCCCccccccccC
Q psy15216 1548 IQPILEIGELCRS--KGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGP----KGIGALYIRRNPRTRIEAQIHGG 1621 (2602)
Q Consensus 1548 ~~~l~~I~~ia~~--~gi~vivD~a~~~g~~~~~l~~~~~D~~v~S~~K~~gp----~G~G~l~~~~~~~~~l~~~~~g~ 1621 (2602)
+.|+++|.++|++ ||+++++|++|+.+........+++|++++|+||.+|+ .| |+++.++++++.+.......
T Consensus 196 v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~G-G~i~~~~~li~~l~~~~~~~ 274 (427)
T 3hvy_A 196 IAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTDVGADIIAGSLIKNIGGGIATTG-GYIAGKEEYVTQATFRVTVP 274 (427)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSC-EEEEECHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCcccCCeEEEECCcccccccccceE-EEEEECHHHHHHHHHHhhcC
Confidence 9999999999999 89999999999877632233346789999999996654 44 99999988777765432100
Q ss_pred CccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEeC
Q psy15216 1622 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYING 1680 (2602)
Q Consensus 1622 ~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~gl~i~~ 1680 (2602)
+. +...+ ++......+...+.. ...+.++..+.+.++.+.|.+ .++.+.+
T Consensus 275 ~~--g~~~~-~~~~~a~~~~~gl~~----~~~r~~~~~~~a~~la~~L~~--~g~~V~p 324 (427)
T 3hvy_A 275 GI--GGECG-STFGVMRSLYEGLFM----APHVTIEAVKGAVFCARIMEL--AGFDVLP 324 (427)
T ss_dssp TT--GGGCC-CCTTCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH--TTCEEES
T ss_pred Cc--ccccC-CCHHHHHHHHHhHhH----HHHHHHHHHHHHHHHHHHHHh--CCCeecC
Confidence 00 00111 212111222233332 345667778888888888887 3445543
No 472
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.71 E-value=6.2e-16 Score=201.70 Aligned_cols=309 Identities=17% Similarity=0.180 Sum_probs=206.9
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhc---cC
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK---KR 1481 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~---~~ 1481 (2602)
.++.+.+++.+.++.....+.. + ......+++++++++++ +++++|++|+++|+..++..+..... .+
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~--~-----~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~ 123 (395)
T 3nx3_A 53 NHAKFNAKIKAQVDKLLHTSNL--Y-----YNENIAAAAKNLAKASA--LERVFFTNSGTESIEGAMKTARKYAFNKGVK 123 (395)
T ss_dssp SCHHHHHHHHHHHTTCSCCCTT--S-----BCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHhccccccc--c-----CCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHHHHHHHHhhccCCC
Confidence 4789999999988753221111 1 12457889999999998 56899999999999999987752100 35
Q ss_pred CCEEEEcCCCCcchHHHHHHHH----------hCCcEEEEeccCCCCCcChhHHHhhccCCceEEEEeccccccccccC-
Q psy15216 1482 GKHIITVQTEHKSVLDSIRKLE----------NDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP- 1550 (2602)
Q Consensus 1482 gd~Vlv~~~~~~s~~~~~~~~~----------~~G~~v~~v~~~~~~~id~d~l~~~i~~~t~lv~l~~~~n~tG~~~~- 1550 (2602)
+++|+++++.|+++......+. ..+..+..++. .|+++|++++++++++|++.+++|++|.+.|
T Consensus 124 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~~~~~~~G~~~~~ 198 (395)
T 3nx3_A 124 GGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-----NDISSVEKLVNEKTCAIILESVQGEGGINPAN 198 (395)
T ss_dssp TCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-----TCHHHHHTTCCTTEEEEEEESEECTTSCEECC
T ss_pred CCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-----CCHHHHHHhccCCeEEEEEeCccCCCCcccCC
Confidence 7999999999987653332221 11234445543 2799999999999999999999999999988
Q ss_pred ---hHHHHHHhhhcCCEEEEecccc-cCcc----cccCCCCCccEEEEccccccCC-CceEEEEEecCC-CCcccccccc
Q psy15216 1551 ---ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGP-KGIGALYIRRNP-RTRIEAQIHG 1620 (2602)
Q Consensus 1551 ---l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~~~~~D~~v~S~~K~~gp-~G~G~l~~~~~~-~~~l~~~~~g 1620 (2602)
+++|.++|++||+++|+|++|+ +|.. ..+.....+|+++ ++|.+++ .++|++++++++ .+.+.+...+
T Consensus 199 ~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t--~sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~ 276 (395)
T 3nx3_A 199 KDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMT--SAKALGCGLSVGAFVINQKVASNSLEAGDHG 276 (395)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGTTTSCCEEEEECHHHHHHHSCTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEE--ecccccCCCceEEEEEchhhhhhhcCCcccC
Confidence 9999999999999999999987 4321 1122233467664 5694432 248999999876 5555543211
Q ss_pred CCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCCcEEEeCCCCCCCCceEEEEEecC
Q psy15216 1621 GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME---SIEEIYINGDMNNRIPHNLNISFNFI 1697 (2602)
Q Consensus 1621 ~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~---~~~gl~i~~~~~~~~~~~~~~~~~~~ 1697 (2602)
+ ..+.+...+.+..++++.... +...++.+++.+++++.|.+ ..+.+..... ...+..+.++..
T Consensus 277 ~-------~~~~~~~~~~aa~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~g~~~~~~~~~~ 343 (395)
T 3nx3_A 277 S-------TYGGNPLVCAGVNAVFEIFKE--EKILENVNKLTPYLEQSLDELINEFDFCKKRKG----LGFMQGLSLDKS 343 (395)
T ss_dssp S-------CBSCCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE----ETTEEEEEECTT
T ss_pred C-------CCCCCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe----EEEEEEEEeCCc
Confidence 1 123455666666677775432 23344444555555555443 1344433211 123444555432
Q ss_pred -CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1698 -EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1698 -~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+...+...| +||.++++. .+++|++++...|++++++++++|++.
T Consensus 344 ~~~~~~~~~l~~~Gi~v~~~~-----------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~ 391 (395)
T 3nx3_A 344 VKVAKVIQKCQENALLLISCG-----------------------ENDLRFLPPLILQKEHIDEMSEKLRKA 391 (395)
T ss_dssp SCHHHHHHHHHHTTEECEEET-----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHCCCEEecCC-----------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 455666665 799988653 178999999999999999999999873
No 473
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.71 E-value=1.1e-15 Score=201.00 Aligned_cols=308 Identities=15% Similarity=0.127 Sum_probs=202.3
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhh-----c
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY-----K 1479 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~-----~ 1479 (2602)
.++.+.+++.+.++... +.+.+ + ..+...++++++++++| .++++|++|+++|+..++..+.... +
T Consensus 82 ~~p~v~~ai~~~~~~~~-~~~~~-~-----~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~al~~a~~~~~~~~g~ 152 (433)
T 1z7d_A 82 CHPNILNAMINQAKNLT-ICSRA-F-----FSVPLGICERYLTNLLG--YDKVLMMNTGAEANETAYKLCRKWGYEVKKI 152 (433)
T ss_dssp TCHHHHHHHHHHHTTCS-CCCTT-S-----EEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHhCC-CccCC-c-----CCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHHHHHHHHHHhhhccCC
Confidence 67899999999887632 22211 1 12456788899999998 4689999999999999998764110 1
Q ss_pred cCC-CEEEEcCCCCcchHHH-HHHHHh----CC-----cEEEEeccCCCCCcChhHHHhhc-cCCceEEEEecccccccc
Q psy15216 1480 KRG-KHIITVQTEHKSVLDS-IRKLEN----DG-----FRVTYLKPKNNGLITLSQLEEKI-CSDTILVSVMLVNNEIGV 1547 (2602)
Q Consensus 1480 ~~g-d~Vlv~~~~~~s~~~~-~~~~~~----~G-----~~v~~v~~~~~~~id~d~l~~~i-~~~t~lv~l~~~~n~tG~ 1547 (2602)
++| ++|+++++.|++.... +..... .+ ..+..++. .|+++|++++ ++++++|+++++++++|.
T Consensus 153 ~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~~~vi~ep~~~~~G~ 227 (433)
T 1z7d_A 153 PENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-----DDLEALEEELKDPNVCAFIVEPIQGEAGV 227 (433)
T ss_dssp CTTCCEEEEETTC--------------------------CEEEECT-----TCHHHHHHHHTSTTEEEEEECSSBSTTTS
T ss_pred CCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCCEEEEEEECCCCCCCc
Confidence 367 9999999998875432 222210 01 23344443 3899999999 678899988888888998
Q ss_pred cc----ChHHHHHHhhhcCCEEEEecccc-cCcc----cccCCCCCccEEEEccccccCCCc---eEEEEEecCCCCccc
Q psy15216 1548 IQ----PILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGPKG---IGALYIRRNPRTRIE 1615 (2602)
Q Consensus 1548 ~~----~l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~~~~~D~~v~S~~K~~gp~G---~G~l~~~~~~~~~l~ 1615 (2602)
+. ++++|.++|++||+++|+|++|+ +|.. .++.....+|++ |++|.+|+ | +|++++++++++.+.
T Consensus 228 ~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~ 304 (433)
T 1z7d_A 228 IVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLGKALSG-GHYPISAVLANDDIMLVIK 304 (433)
T ss_dssp BCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTCC
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE--EECccccC-CCCCeEEEEECHHHHhhhc
Confidence 76 59999999999999999999996 3211 112223357876 67796652 4 899999987766665
Q ss_pred cccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCcEEEeCCCCCCCCceEEE
Q psy15216 1616 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNI 1692 (2602)
Q Consensus 1616 ~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~gl~i~~~~~~~~~~~~~~ 1692 (2602)
+... .. ..+.+...+++..++|+.+.. ++..++..++.+++.+.|.+. .+.+..... ...+..+
T Consensus 305 ~~~~------~~-t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~----~g~~~~i 371 (433)
T 1z7d_A 305 PGEH------GS-TYGGNPLAASICVEALNVLIN--EKLCENAEKLGGPFLENLKRELKDSKIVRDVRG----KGLLCAI 371 (433)
T ss_dssp TTCC------CC-TTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEE----ETTEEEE
T ss_pred cccc------cc-cCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe----eeeEEEE
Confidence 4211 11 123455666666677775543 256677778888888888652 233222111 1234444
Q ss_pred EEecC--CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1693 SFNFI--EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1693 ~~~~~--~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
.++.. +..++...| +||.++++. .+++|++++..+|++|+++++++|++.
T Consensus 372 ~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~ 425 (433)
T 1z7d_A 372 EFKNELVNVLDICLKLKENGLITRDVH-----------------------DKTIRLTPPLCITKEQLDECTEIIVKT 425 (433)
T ss_dssp EECTTTCCHHHHHHHHHHTTEECCEET-----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEccChhHHHHHHHHHHHCCeEEecCC-----------------------CCEEEEECCcCCCHHHHHHHHHHHHHH
Confidence 55432 345566655 799887541 178999999889999999999999874
No 474
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.71 E-value=1.4e-16 Score=206.19 Aligned_cols=280 Identities=14% Similarity=0.071 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHh-CC-----CCCc--EEEeCCHHHHHHHHHHhccccccc--CCCEEEEcCCCCcccHHHHHHHHhCCcE
Q psy15216 43 IEKARNEVAQLI-YA-----DPRE--IIWTSGATESNNLAIKGAAHFYKK--RGKHIITVQTEHKSVLDSIRKLENDGFR 112 (2602)
Q Consensus 43 ~~~~r~~lA~~~-g~-----~~~~--Iv~t~g~T~al~~~~~~l~~~~~~--~gd~Vlv~~~~~~s~~~~~~~~~~~G~~ 112 (2602)
..++|+++++++ +. ++++ ++.|.|+++|+.+++.++. . | |+|++++|.|+.+...++.+ |++
T Consensus 74 ~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~----~~~~-d~Vlv~~P~y~~~~~~~~~~---g~~ 145 (405)
T 3k7y_A 74 TEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLK----MLNV-ETLYVTNPPYINHVNMIESR---GFN 145 (405)
T ss_dssp CHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHH----TTTC-CEEEEESSCCHHHHHHHHTT---TCE
T ss_pred cHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHH----hcCC-CEEEEeCCCCHhHHHHHHHc---CCe
Confidence 456777777776 21 3344 6999999999999999887 5 7 99999999999988777655 999
Q ss_pred EEEecc-CC-CCccChHHHHhhcc--CCceEEEEecc-cCccccccc---HHHHHHHHHhcCCEEEEecccccccc----
Q psy15216 113 VTYLKP-KN-NGLITLSQLEEKIC--SDTILVSVMLV-NNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI---- 180 (2602)
Q Consensus 113 v~~v~~-~~-~~~ld~e~l~~~i~--~~tklv~i~~~-~npTG~~~~---l~~I~~la~~~g~~livD~a~a~g~~---- 180 (2602)
++.+++ ++ ++.+|++++++.++ +++++++++.+ |||||.+++ +++|+++|++|++++|+|++|..-..
T Consensus 146 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~ 225 (405)
T 3k7y_A 146 LKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLE 225 (405)
T ss_dssp EEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTT
T ss_pred EEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcc
Confidence 999987 33 57899999999996 45778888765 899999999 45678889999999999999852111
Q ss_pred ----cc-cC-CCCCccEEEeccccccCCCC--cEEEEE---ecCCCCcccceecCCCccccccccCcchhHHHHHHHHHH
Q psy15216 181 ----DI-NI-QNYKVDLMSFSAHKIYGPKG--IGALYI---RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR 249 (2602)
Q Consensus 181 ----~~-dl-~~~~~D~~~~S~~K~~Gp~G--~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~ 249 (2602)
++ .+ .....-+++.|+||.||++| +||+++ ++++++.+...+.. ..+....+++..+..++..++.
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~~~~~~l~ 302 (405)
T 3k7y_A 226 EDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCF---IVRKFYSSPVIHTNRILCQLLN 302 (405)
T ss_dssp GGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHH---HHHTTTSSCCHHHHHHHHHHHH
T ss_pred cchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHH---HHhcccCCCcHHHHHHHHHHhC
Confidence 01 11 11123477889999999888 899875 23333223211100 0001122345555555555665
Q ss_pred H---HH---HhHHHHHHHHHHHHHHHHHHHh----hccC---ceEEeCCCCCCCCceEEEEEcccChhHHHHHh--CCeE
Q psy15216 250 L---AR---IEMKEELKRILFLQKRLYNGLM----ESIE---EIYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIA 314 (2602)
Q Consensus 250 ~---~~---~~~~~~~~~~~~l~~~l~~~L~----~~~~---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~ 314 (2602)
. .. ..+...+++++++++++.+.|. + .. ++....+.. +.++++. .+. +++..| +||.
T Consensus 303 ~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~-~g~~~~~~~~~p~g-----g~f~~~~-l~~-~~~~~L~~~gV~ 374 (405)
T 3k7y_A 303 NQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKK-YNLNYDWNVYKKQR-----GLFSFVP-LLA-KIAEHLKTHHIY 374 (405)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG-GTCCCCGGGGSSCC-----SSEEECG-GGG-GGTTTTTTTTEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCCCCCccccCCc-----eEEEecC-CCH-HHHHHHHHCCEe
Confidence 2 11 2345667778999999999998 5 31 133332221 2223332 222 233333 5666
Q ss_pred EcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 315 VSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 315 v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
+.++ + |||++. .+++++++++++|++.
T Consensus 375 v~p~-------------------------~--Ris~a~-~~~~~i~~~~~~i~~~ 401 (405)
T 3k7y_A 375 IINN-------------------------G--RINVSG-ITKNNVDYIADKICLS 401 (405)
T ss_dssp CCTT-------------------------S--EEEGGG-CCTTHHHHHHHHHHHH
T ss_pred ecCC-------------------------C--eEEEec-cCHHHHHHHHHHHHHH
Confidence 6531 2 999964 3568899999999974
No 475
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.71 E-value=4.7e-17 Score=217.44 Aligned_cols=353 Identities=16% Similarity=0.125 Sum_probs=213.7
Q ss_pred HHHHHHHHHhcCCCccccceeeeeceeeeccCC-CCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHH
Q psy15216 1369 FIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDA-TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVA 1447 (2602)
Q Consensus 1369 ~~~v~~aL~~~g~~~~~~ei~~iP~~~v~L~~~-~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia 1447 (2602)
+......|+..|..+.....+ ..|+|.. +.+. +.+.+++.+.+... .. .|.. .....++|++++
T Consensus 20 ~~~~~~~~~~~g~~~~~~~~~-----~~ylD~~~~~~~-~~v~~a~~~~l~~~--~~---~y~~----~~~~~~l~~~la 84 (467)
T 2oqx_A 20 RAYREEAIIKSGMNPFLLDSE-----DVFIDLLTDSGT-GAVTQSMQAAMMRG--DE---AYSG----SRSYYALAESVK 84 (467)
T ss_dssp HHHHHHHHHHTTSCGGGSCGG-----GCSEECSCCSSC-SCCCHHHHHHTTSC--CC---CSSS----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCceeccCC-----CeeEecccCCCc-HHHHHHHHHHhccC--cc---eecc----CchhHHHHHHHH
Confidence 344456777777766544333 2344432 2222 67777887776431 11 1111 123568899999
Q ss_pred HHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccC-----C----CEEEEcCCCCcc-hHHHHHHHHhCCcEEEEec----
Q psy15216 1448 QLIYADPREIIWTSGATESNNLAIKGAAHFYKKR-----G----KHIITVQTEHKS-VLDSIRKLENDGFRVTYLK---- 1513 (2602)
Q Consensus 1448 ~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~-----g----d~Vlv~~~~~~s-~~~~~~~~~~~G~~v~~v~---- 1513 (2602)
++++. ++++||+|+|+|++.++.++. ++ | |+|+++ ..|.. +..... ..|+.+....
T Consensus 85 ~~~~~--~~v~~t~~gt~A~~~al~~~~----~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~---~~~~~~~~~~~~~~ 154 (467)
T 2oqx_A 85 NIFGY--QYTIPTHQGRGAEQIYIPVLI----KKREQEKGLDRSKMVAFS-NYFFDTTQGHSQ---INGCTVRNVYIKEA 154 (467)
T ss_dssp HHHCC--SEEEEEC--CCSHHHHHHHHH----HHHHHHHCCCTTTCEEEE-SSCCHHHHHHHH---HTTCEEEECBCTTT
T ss_pred HHhCc--CcEEEcCCcHHHHHHHHHHHh----ccccccCCCCccceEEec-ccccccchhhhh---ccCcceeecccccc
Confidence 99986 589999999999999999987 55 7 888877 44533 333332 2356655431
Q ss_pred --cC----CCCCcChhHHHhhcc----CCceEEEEecccccc-ccccC---hHHHHHHhhhcCCEEEEeccccc------
Q psy15216 1514 --PK----NNGLITLSQLEEKIC----SDTILVSVMLVNNEI-GVIQP---ILEIGELCRSKGVIFHCDAAQAV------ 1573 (2602)
Q Consensus 1514 --~~----~~~~id~d~l~~~i~----~~t~lv~l~~~~n~t-G~~~~---l~~I~~ia~~~gi~vivD~a~~~------ 1573 (2602)
.+ .++.+|+++|+++|+ ++|++|++++++||+ |.++| +++|.++|++||+++|+|++|+.
T Consensus 155 ~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~ 234 (467)
T 2oqx_A 155 FDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFI 234 (467)
T ss_dssp TCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHH
T ss_pred ccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhc
Confidence 22 245689999999998 479999999999998 88766 77999999999999999988766
Q ss_pred -----CcccccCCC------CCccEEEEccccccCCC-ceEEEEEecC-CCC---cccccc-ccCCccccCCCCCcchhH
Q psy15216 1574 -----GKIDINIQN------YKVDLMSFSAHKIYGPK-GIGALYIRRN-PRT---RIEAQI-HGGGHEYGLRSGTLATHQ 1636 (2602)
Q Consensus 1574 -----g~~~~~l~~------~~~D~~v~S~~K~~gp~-G~G~l~~~~~-~~~---~l~~~~-~g~~~~~~~~~gt~~~~~ 1636 (2602)
+....+... ..+|++++|+||.+|++ | |+++.+++ +++ .+.+.. .+++. ...++.+...
T Consensus 235 ~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 310 (467)
T 2oqx_A 235 KQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTECRTLCVVQEGF---PTYGGLEGGA 310 (467)
T ss_dssp HHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHHHHHHHHHTTSS---CCCCCCCHHH
T ss_pred ccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecChhHHHHHHHHHHhhhccCCc---ccccchhhhH
Confidence 222222111 23678899999977755 5 78887765 333 333321 11111 1223444444
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCCCCCCceEEEEEe----cCCcHH-----HHHhc
Q psy15216 1637 IVGMGEAFRLARIEM-KEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN----FIEGES-----LLMAI 1706 (2602)
Q Consensus 1637 ~~al~~aL~~~~~~~-~~~~~~~~~l~~~l~~~L~~~~~gl~i~~~~~~~~~~~~~~~~~----~~~~~~-----~~~~L 1706 (2602)
+.++..++. ..+ +...++..++++++.+.|.+ . ++.+. +.. ..+..+.++ ..+..+ +...|
T Consensus 311 ~~al~~~l~---~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 381 (467)
T 2oqx_A 311 MERLAVGLY---DGMNLDWLAYRIAQVQYLVDGLEE-I-GVVCQ-QAG---GHAAFVDAGKLLPHIPADQFPAQALACEL 381 (467)
T ss_dssp HHHHHHHHH---HTTCHHHHHHHHHHHHHHHHHHHH-T-TCCEE-EEC---SSCEEEEHHHHSTTSCGGGCHHHHHHHHH
T ss_pred HHHHHHhhH---hhhhHHHHHHHHHHHHHHHHHHHH-C-CCeee-cCC---ceEEEEechhhcccCCcccccHHHHHHHH
Confidence 444433322 112 23445556778888899987 3 55554 321 233444442 123222 24443
Q ss_pred ---CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCC-CCHHHHHHHHHHHHHh
Q psy15216 1707 ---KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF-TTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1707 ---~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~-~t~edid~li~~L~~~ 1765 (2602)
+||.+.++..|..+. .++ .+.......+++|++++.. +|.+++++++++|++.
T Consensus 382 ~~~~gv~~~~~~~~~~~~-~~~-----~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~ 438 (467)
T 2oqx_A 382 YKVAGIRAVEIGSFLLGR-DPK-----TGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHV 438 (467)
T ss_dssp HHHHCEECEEESHHHHCB-CTT-----TCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHH
T ss_pred HHhcCceecccccccccc-ccc-----ccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 699998754331110 000 0111112237899999998 9999999999999974
No 476
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.70 E-value=5.2e-16 Score=205.09 Aligned_cols=320 Identities=14% Similarity=0.104 Sum_probs=207.6
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCE
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 1484 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~ 1484 (2602)
.++.+.+++.+.++... +...+ +. .....+++++++++++.++++|+||+|+++|+..++..+.. ...+++
T Consensus 60 ~~p~v~~a~~~~~~~~~-~~~~~-~~-----~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~--~~~~~~ 130 (433)
T 1zod_A 60 CHPEIVSVIGEYAGKLD-HLFSE-ML-----SRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKL--VTGKYE 130 (433)
T ss_dssp TCHHHHHHHHHHHHHCC-CCCTT-CC-----CHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHH--HHTCCE
T ss_pred CCHHHHHHHHHHHHhCc-ccccc-cC-----CHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHH--hhCCCe
Confidence 47899999999887632 11111 11 13467888999999998888999999999999999987541 124689
Q ss_pred EEEcCCCCcchHHHHHHHHh---------CCcEEEEeccCCC----C--------CcChhHHHhhcc----CCceEEEEe
Q psy15216 1485 IITVQTEHKSVLDSIRKLEN---------DGFRVTYLKPKNN----G--------LITLSQLEEKIC----SDTILVSVM 1539 (2602)
Q Consensus 1485 Vlv~~~~~~s~~~~~~~~~~---------~G~~v~~v~~~~~----~--------~id~d~l~~~i~----~~t~lv~l~ 1539 (2602)
|++.++.|++.......+.. ....+..++.+.. + .+|+++|+++++ +++++|+++
T Consensus 131 vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~ 210 (433)
T 1zod_A 131 IVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAE 210 (433)
T ss_dssp EEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEEC
T ss_pred EEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEc
Confidence 99999988775443322210 0012344443211 1 246899999997 567788777
Q ss_pred ccccccccccC----hHHHHHHhhhcCCEEEEecccc-cCccc----ccCCCCCccEEEEccccccCC-CceEEEEEecC
Q psy15216 1540 LVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHKIYGP-KGIGALYIRRN 1609 (2602)
Q Consensus 1540 ~~~n~tG~~~~----l~~I~~ia~~~gi~vivD~a~~-~g~~~----~~l~~~~~D~~v~S~~K~~gp-~G~G~l~~~~~ 1609 (2602)
.++|+||...| +++|.++|++||+++|+|++|+ ++... ++.....+|++ |++|.+|+ -.+|+++++++
T Consensus 211 p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~G~~ig~~~~~~~ 288 (433)
T 1zod_A 211 PILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGAGLPLAAIVTSAA 288 (433)
T ss_dssp SEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHTTSSCEEEEECHH
T ss_pred cccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEE--EecccccCCCCeeEEEEhHH
Confidence 77788998766 9999999999999999999998 54221 12223346765 67795543 23899999987
Q ss_pred CCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCcEEEeCCCCCCC
Q psy15216 1610 PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRI 1686 (2602)
Q Consensus 1610 ~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~gl~i~~~~~~~~ 1686 (2602)
+++.+.+... ... ...+.+...+.+..++++.... +...++..+++++++++|.+. .+.+....+ .
T Consensus 289 ~~~~~~~~~~----~~~-~t~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-~--- 357 (433)
T 1zod_A 289 IEERAHELGY----LFY-TTHVSDPLPAAVGLRVLDVVQR--DGLVARANVMGDRLRRGLLDLMERFDCIGDVRG-R--- 357 (433)
T ss_dssp HHHHHHHTTC----CCC-CTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE-E---
T ss_pred HHHhhccCCC----CCC-CCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE-E---
Confidence 6655543100 000 1223456666666678875543 245667777777777777652 344432211 1
Q ss_pred CceEEEEEecC---------CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHH
Q psy15216 1687 PHNLNISFNFI---------EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 1755 (2602)
Q Consensus 1687 ~~~~~~~~~~~---------~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edi 1755 (2602)
..+..+.++.. ....+...| +||.+.++..+.. .+++||+++...|++++
T Consensus 358 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~-------------------~~~lRi~~~~~~t~~~i 418 (433)
T 1zod_A 358 GLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGM-------------------GGVFRIAPPLTVSEDEI 418 (433)
T ss_dssp TTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTS-------------------CCEEEECCCTTCCHHHH
T ss_pred EEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCC-------------------CCEEEEECCcCCCHHHH
Confidence 22333444421 134555555 7999988764321 27899999988999999
Q ss_pred HHHHHHHHHh
Q psy15216 1756 DFTIKLLKMK 1765 (2602)
Q Consensus 1756 d~li~~L~~~ 1765 (2602)
++++++|++.
T Consensus 419 ~~~l~~l~~~ 428 (433)
T 1zod_A 419 DLGLSLLGQA 428 (433)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999873
No 477
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.70 E-value=3.5e-16 Score=207.61 Aligned_cols=321 Identities=13% Similarity=0.080 Sum_probs=208.5
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhc----c
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK----K 1480 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~----~ 1480 (2602)
.++.+.+++.+.++... .+. .+.+ ......++++.++++++.++++|+||+|+++|++.++.++..... .
T Consensus 67 ~~~~v~~a~~~~~~~~~--~~~-~~~~---~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~ 140 (449)
T 3a8u_X 67 TRKEIQEAVAKQLSTLD--YSP-GFQY---GHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQA 140 (449)
T ss_dssp SCHHHHHHHHHHTTTCS--CCC-SSSC---CCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHhCC--Ccc-cccc---CCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 47899999999886532 111 0011 123467889999999987788999999999999999988762100 1
Q ss_pred CCCEEEEcCCCCcchHH-HHHHHH----hCC-----cEEEEeccCCCC-----CcC--------hhHHHhhcc----CCc
Q psy15216 1481 RGKHIITVQTEHKSVLD-SIRKLE----NDG-----FRVTYLKPKNNG-----LIT--------LSQLEEKIC----SDT 1533 (2602)
Q Consensus 1481 ~gd~Vlv~~~~~~s~~~-~~~~~~----~~G-----~~v~~v~~~~~~-----~id--------~d~l~~~i~----~~t 1533 (2602)
+||+|++.++.|++... .+.... +.+ ..+..++.+..+ .+| +++|+++++ +++
T Consensus 141 ~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~ 220 (449)
T 3a8u_X 141 TKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNI 220 (449)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGE
T ss_pred CCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCE
Confidence 67999999999887643 333221 000 123445433211 146 999999997 567
Q ss_pred eEEEEeccccccccccC----hHHHHHHhhhcCCEEEEeccc-ccCccc----ccCCCCCccEEEEccccccCCCc---e
Q psy15216 1534 ILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQ-AVGKID----INIQNYKVDLMSFSAHKIYGPKG---I 1601 (2602)
Q Consensus 1534 ~lv~l~~~~n~tG~~~~----l~~I~~ia~~~gi~vivD~a~-~~g~~~----~~l~~~~~D~~v~S~~K~~gp~G---~ 1601 (2602)
++|++++.+|+||.+.| +++|.++|++||+++|+|++| .+|... ++.....+|++ |++|.+++ | +
T Consensus 221 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~~ 297 (449)
T 3a8u_X 221 AAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN-GAIPM 297 (449)
T ss_dssp EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSSCC
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC-CCCce
Confidence 78888777788999888 999999999999999999999 465321 12222346866 66796554 4 8
Q ss_pred EEEEEecCCCCccccccccCCccccC---CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcE
Q psy15216 1602 GALYIRRNPRTRIEAQIHGGGHEYGL---RSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES--IEEI 1676 (2602)
Q Consensus 1602 G~l~~~~~~~~~l~~~~~g~~~~~~~---~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~--~~gl 1676 (2602)
|++++++++++.+.+...+ .....+ ...+.+...++++.++|+.... +...++.+++.+++++.|.+. ++.+
T Consensus 298 G~~~~~~~~~~~l~~~~~~-~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~ 374 (449)
T 3a8u_X 298 GAVIASTEIYQTFMNQPTP-EYAVEFPHGYTYSAHPVACAAGLAALCLLQK--ENLVQSVAEVAPHFEKALHGIKGAKNV 374 (449)
T ss_dssp EEEEEEHHHHHHHHTCSSC-TTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHTTTTSTTE
T ss_pred EEEEECHHHHHHhhccCcc-cccccccccCCCcccHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 9999998765554331100 000111 1223455666677778875543 356778888888888888761 2222
Q ss_pred EEeCCCCCCCCceEEEEEecCC-c-----HHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCC
Q psy15216 1677 YINGDMNNRIPHNLNISFNFIE-G-----ESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR 1748 (2602)
Q Consensus 1677 ~i~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~ 1748 (2602)
..... ...+..+.++... . .++...| +||.++++. +++||+++.
T Consensus 375 ~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g------------------------~~iRis~~~ 426 (449)
T 3a8u_X 375 IDIRN----FGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG------------------------DTLQFGPTF 426 (449)
T ss_dssp EEEEE----ETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET------------------------TEEEECCCT
T ss_pred EEEee----eEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC------------------------CEEEEECCC
Confidence 21110 1233444454321 1 1455555 688887541 579999988
Q ss_pred CCCHHHHHHHHHHHHHh
Q psy15216 1749 FTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1749 ~~t~edid~li~~L~~~ 1765 (2602)
.+|++++++++++|++.
T Consensus 427 ~~t~~~i~~~l~~l~~~ 443 (449)
T 3a8u_X 427 NSKPQDLDRLFDAVGEV 443 (449)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHH
Confidence 89999999999999974
No 478
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.70 E-value=2.9e-16 Score=207.70 Aligned_cols=319 Identities=13% Similarity=0.096 Sum_probs=211.4
Q ss_pred CCCHHHH-H-HHHH---HHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhC-CCCCcEEEeCCHHHHHHHHHHhcccc
Q psy15216 8 PIDPRVV-D-KMIP---YLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY-ADPREIIWTSGATESNNLAIKGAAHF 81 (2602)
Q Consensus 8 ~~p~~v~-~-a~~~---~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g-~~~~~Iv~t~g~T~al~~~~~~l~~~ 81 (2602)
..+|.+. + ++.+ .+.... +.+ . .+ ..+...+++++++++++ .++++|+|++|+++|++.++.++...
T Consensus 70 ~~~p~v~~~~A~~~~~~~~~~~~---~~~-~--~~-~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~ 142 (449)
T 2cjg_A 70 MNPPALVDDREFHAELMQAALNK---PSN-S--DV-YSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDW 142 (449)
T ss_dssp BSCHHHHTCHHHHHHHHHHHTCC---CCT-T--TC-CCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcC---CCC-c--cc-CCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHH
Confidence 4589999 8 9999 554421 111 0 11 12346788899999997 56789999999999999999865311
Q ss_pred cc---------c-CCCEEEEcCCCCcccHHHHHHHH------hCCc-----EEEEeccCC--CC--------ccChHHHH
Q psy15216 82 YK---------K-RGKHIITVQTEHKSVLDSIRKLE------NDGF-----RVTYLKPKN--NG--------LITLSQLE 130 (2602)
Q Consensus 82 ~~---------~-~gd~Vlv~~~~~~s~~~~~~~~~------~~G~-----~v~~v~~~~--~~--------~ld~e~l~ 130 (2602)
.- + +|++|++.++.|+++...+..+. +.+. .+..++.++ .. ..++++|+
T Consensus 143 ~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le 222 (449)
T 2cjg_A 143 KSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQAR 222 (449)
T ss_dssp HHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHH
T ss_pred hcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHH
Confidence 11 1 28999999999987644322110 1122 456666543 11 25667798
Q ss_pred hhcc---CCceEEEEecccCccccccc----HHHHHHHHHhcCCEEEEecccc-ccccc----ccCCCCCccEEEecccc
Q psy15216 131 EKIC---SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHK 198 (2602)
Q Consensus 131 ~~i~---~~tklv~i~~~~npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~~----~dl~~~~~D~~~~S~~K 198 (2602)
++++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+|++|+ +|... .+.....+|++ +++|
T Consensus 223 ~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK 300 (449)
T 2cjg_A 223 AAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--AFGK 300 (449)
T ss_dssp HHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECG
T ss_pred HHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--EecC
Confidence 8884 67899888888899998777 9999999999999999999998 43221 11122356776 4669
Q ss_pred ccCCCCcEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc--
Q psy15216 199 IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES-- 276 (2602)
Q Consensus 199 ~~Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~-- 276 (2602)
.+ + +|++++++++++.+.+...+... .....+.+..+.+++.++|+.... ++..++..++.++++++|.+.
T Consensus 301 ~l--~-iG~~~~~~~~~~~l~~~~~~~~~--~~~t~~~n~~~~~aa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~ 373 (449)
T 2cjg_A 301 KT--Q-VCGVMAGRRVDEVADNVFAVPSR--LNSTWGGNLTDMVRARRILEVIEA--EGLFERAVQHGKYLRARLDELAA 373 (449)
T ss_dssp GG--S-SEEEEECGGGGGSTTCTTTSTTS--SCCSSSSCHHHHHHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc--c-EEEEEECHHHhhhhhhcccCCcc--cccCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHh
Confidence 76 3 79999998887765542211100 111234566777777788885543 356677788888888888652
Q ss_pred -cCc-eEEeCCCCCCCCceEEEEEcc-cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecC
Q psy15216 277 -IEE-IYINGDMNNRIPHNLNISFNF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG 351 (2602)
Q Consensus 277 -~~g-~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~ 351 (2602)
++. +....+. ..++.+.++. .+..++...| +||.++++. .++||++++
T Consensus 374 ~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----------------------~~~iRi~~~ 426 (449)
T 2cjg_A 374 DFPAVVLDPRGR----GLMCAFSLPTTADRDELIRQLWQRAVIVLPAG-----------------------ADTVRFRPP 426 (449)
T ss_dssp HSTTTSEEEEEE----TTEEEEECSSHHHHHHHHHHHHHTTEECEEET-----------------------TTEEEECCC
T ss_pred hCCCceeeEeec----cEEEEEEECChHHHHHHHHHHHHCCeEEecCC-----------------------CCEEEEECC
Confidence 343 3322211 2233344432 1244566666 788887641 178999999
Q ss_pred CCCCHHHHHHHHHHHHhh
Q psy15216 352 RFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 352 ~~~t~edid~li~~L~~~ 369 (2602)
..++++|+++++++|++.
T Consensus 427 ~~~t~e~i~~~l~~l~~~ 444 (449)
T 2cjg_A 427 LTVSTAEIDAAIAAVRSA 444 (449)
T ss_dssp TTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 999999999999999864
No 479
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.70 E-value=5.6e-16 Score=205.09 Aligned_cols=313 Identities=13% Similarity=0.090 Sum_probs=203.3
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHhhhhhhccCCC
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTSGATESNNLAIKGAAHFYKKRGK 1483 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~-~~iv~t~gaT~al~~al~~l~~~~~~~gd 1483 (2602)
.++.+.+++.+.++....+... ........+++++++++++... ++++|++|+++|+..++..+.. ..+++
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~------~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~--~~~~~ 131 (439)
T 3dxv_A 60 GHPAIVAAVSAAAANPAGATIL------SASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVK--ATGRS 131 (439)
T ss_dssp SCHHHHHHHHHHHHSCSCSCSS------SSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHH--HHSCC
T ss_pred CCHHHHHHHHHHHHhccCcccc------ccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHH--HhCCC
Confidence 5789999999988764221111 1122467889999999997655 6899999999999999998631 13567
Q ss_pred EEEEcCCCCcchHHHHHHHHhCCcE--------------EEEeccCCCCCc-----ChhHHHhhc----cCCceEEEEec
Q psy15216 1484 HIITVQTEHKSVLDSIRKLENDGFR--------------VTYLKPKNNGLI-----TLSQLEEKI----CSDTILVSVML 1540 (2602)
Q Consensus 1484 ~Vlv~~~~~~s~~~~~~~~~~~G~~--------------v~~v~~~~~~~i-----d~d~l~~~i----~~~t~lv~l~~ 1540 (2602)
.|++.++.|++.......+. +.. +..++.+..+.. |+++|++++ .+++++|++..
T Consensus 132 ~vi~~~~~yhg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p 209 (439)
T 3dxv_A 132 GVIAFAGAYHGCTVGSMAFS--GHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEP 209 (439)
T ss_dssp EEEEETTCCCCSSHHHHCC---------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECS
T ss_pred EEEEECCCCCCCcHHHHhhc--CCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 88888888766443332221 111 122332222222 689999999 56788999999
Q ss_pred cccccccccC----hHHHHHHhhhcCCEEEEecccc-cCc----ccccCCCCCccEEEEccccccCCCc--eEEEEEecC
Q psy15216 1541 VNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGK----IDINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRN 1609 (2602)
Q Consensus 1541 ~~n~tG~~~~----l~~I~~ia~~~gi~vivD~a~~-~g~----~~~~l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~ 1609 (2602)
++|++|.+.| +++|.++|++||+++|+|++|+ ++. ...+.....+|++ |++|.+|+ | +|+++++++
T Consensus 210 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G~riG~~~~~~~ 286 (439)
T 3dxv_A 210 IQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLGG-GLPLSAVIAPAE 286 (439)
T ss_dssp SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TSCCEEEEEEHH
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhcC-CcceEEEEECHH
Confidence 9999999999 9999999999999999999996 221 1222333446776 67796553 4 799999988
Q ss_pred CCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCcEEEeCCCCCCC
Q psy15216 1610 PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRI 1686 (2602)
Q Consensus 1610 ~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~gl~i~~~~~~~~ 1686 (2602)
+++.+.+... .. .. .+...+.+..++++.... +...++.+++.+++++.|.+. .+.+....+.
T Consensus 287 ~~~~~~~~~~------~~-t~-~~~~~~~aa~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---- 352 (439)
T 3dxv_A 287 ILDCASAFAM------QT-LH-GNPISAAAGLAVLETIDR--DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGR---- 352 (439)
T ss_dssp HHTSCSSSSC------CT-TT-TCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE----
T ss_pred HHhhhcCCCc------CC-Cc-ccHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE----
Confidence 7776654321 11 12 455555555567765433 344556666666666666542 3444333211
Q ss_pred CceEEEEEe--------c-CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHH
Q psy15216 1687 PHNLNISFN--------F-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 1755 (2602)
Q Consensus 1687 ~~~~~~~~~--------~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edi 1755 (2602)
..+..+.+. . .....+...| +||.++++... .+++||+++...|++++
T Consensus 353 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~---------------------~~~iRi~~~~~~t~e~i 411 (439)
T 3dxv_A 353 GLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMN---------------------GNVLEFTPPLTITETDI 411 (439)
T ss_dssp TTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTT---------------------SCEEEECCCTTCCHHHH
T ss_pred EEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCC---------------------CCEEEEECCCCCCHHHH
Confidence 122233331 1 1123455444 69998876321 27899999988999999
Q ss_pred HHHHHHHHHh
Q psy15216 1756 DFTIKLLKMK 1765 (2602)
Q Consensus 1756 d~li~~L~~~ 1765 (2602)
++++++|++.
T Consensus 412 ~~~l~~l~~~ 421 (439)
T 3dxv_A 412 HKALDLLDRA 421 (439)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999974
No 480
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.69 E-value=3.5e-15 Score=198.12 Aligned_cols=327 Identities=12% Similarity=0.089 Sum_probs=208.8
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccc-c--
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-K-- 84 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~-~-- 84 (2602)
..+|.+.+++.+.+......+. ....+...+++++++++++.+.+ |+|++|+++|++.++.++..... .
T Consensus 65 ~~~p~v~~A~~~~~~~~~~~~~-------~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~ 136 (452)
T 3n5m_A 65 YGRKELAEAAYKQLQTLSYFPM-------SQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANETAFKIARQYYAQKGE 136 (452)
T ss_dssp BCCHHHHHHHHHHHTTCCCCCT-------TSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHHHhcCCccc-------ccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHHHHHHHHHHHHHhcCC
Confidence 4589999999998865321111 11234577899999999987666 99999999999999998762100 2
Q ss_pred -CCCEEEEcCCCCcccHHHHHHHHhC----------CcEEEEeccCCCCc---cC---------hHHHHhhcc----CCc
Q psy15216 85 -RGKHIITVQTEHKSVLDSIRKLEND----------GFRVTYLKPKNNGL---IT---------LSQLEEKIC----SDT 137 (2602)
Q Consensus 85 -~gd~Vlv~~~~~~s~~~~~~~~~~~----------G~~v~~v~~~~~~~---ld---------~e~l~~~i~----~~t 137 (2602)
+++.|++.++.|+++......+... ...+..++...... -| +++|+++++ +++
T Consensus 137 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~ 216 (452)
T 3n5m_A 137 PHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETI 216 (452)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGE
T ss_pred CCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCE
Confidence 6799999999999875544433100 01234444321111 12 899999987 567
Q ss_pred eEEEEecc-cCccccccc----HHHHHHHHHhcCCEEEEecccc-cccc----cccCCCCCccEEEeccccccCC--CCc
Q psy15216 138 ILVSVMLV-NNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGP--KGI 205 (2602)
Q Consensus 138 klv~i~~~-~npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~----~~dl~~~~~D~~~~S~~K~~Gp--~G~ 205 (2602)
++|+++.+ +| ||.+.| +++|.++|++||+++|+|++|. +|.. ..+.....+|+++ ++|.+|+ ..+
T Consensus 217 ~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t--~sK~l~~G~~~i 293 (452)
T 3n5m_A 217 AAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIIT--MAKGITSAYLPL 293 (452)
T ss_dssp EEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGTTSSCC
T ss_pred EEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEe--ecccccCCCcce
Confidence 88888888 89 999887 9999999999999999999986 4321 1222233467765 5694432 347
Q ss_pred EEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh---ccCceEE
Q psy15216 206 GALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME---SIEEIYI 282 (2602)
Q Consensus 206 G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~---~~~g~~l 282 (2602)
|++++++++++.+.+....... ......+.+..+.+++.++|+.... +...++.+++.+++++.|.+ ..+.+..
T Consensus 294 g~~~~~~~i~~~~~~~~~~~~~-~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 370 (452)
T 3n5m_A 294 SATAVKREIYEAFKGKGEYEFF-RHINTFGGNPAACALALKNLEIIEN--ENLIERSAQMGSLLLEQLKEEIGEHPLVGD 370 (452)
T ss_dssp EEEEEEHHHHGGGCSSSTTCSC-CCCCSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred EEEEECHHHHHHHhhccCCCCc-cccCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9999999887776431000000 0011234566667777778875432 33445555555555555543 1344433
Q ss_pred eCCCCCCCCceEEEEEccc-C---------hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEec
Q psy15216 283 NGDMNNRIPHNLNISFNFI-E---------GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI 350 (2602)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~ 350 (2602)
..+. ..+..+.+... . ...+...+ +||.++++..+.++ ..++|||++
T Consensus 371 ~~~~----g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~-----------------~~~~iRi~~ 429 (452)
T 3n5m_A 371 IRGK----GLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAG-----------------YNNILTLAP 429 (452)
T ss_dssp EEES----SSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTT-----------------CCCEEEECC
T ss_pred EEEE----EEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCC-----------------CCCEEEEEC
Confidence 3221 12233433211 0 12444444 79999987655332 137899999
Q ss_pred CCCCCHHHHHHHHHHHHhh
Q psy15216 351 GRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 351 ~~~~t~edid~li~~L~~~ 369 (2602)
+...|++|+++++++|++.
T Consensus 430 ~~~~t~e~i~~~l~~l~~~ 448 (452)
T 3n5m_A 430 PLVISSEEIAFVIGTLKTA 448 (452)
T ss_dssp CTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 8889999999999999864
No 481
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.69 E-value=5.9e-16 Score=209.09 Aligned_cols=310 Identities=13% Similarity=0.079 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCEEEEcCCCCcccHHHHHHHHhCCcEEEEeccCCC
Q psy15216 42 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN 121 (2602)
Q Consensus 42 ~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~ 121 (2602)
.+.++++.+|+++|++ ..+++++|++.|+..++.++. +|||+|+++.+.|.|+...+... |+++++++++.+
T Consensus 196 ~i~eaE~~lA~~fGa~-~a~~v~nGts~An~~ai~al~----~pGD~VLv~r~~H~S~~~~l~ls---Ga~pv~v~~~~~ 267 (715)
T 3n75_A 196 PHKEAEQYIARVFNAD-RSYMVTNGTSTANKIVGMYSA----PAGSTILIDRNCHKSLTHLMMMS---DVTPIYFRPTRN 267 (715)
T ss_dssp HHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHC----CTTCEEEEESSCCHHHHHHHHHS---CCEEEEECCCBC
T ss_pred HHHHHHHHHHHHhCCC-CceEECcHHHHHHHHHHHHhC----CCCCEEEECCCccHHHHHHHHHc---CCEEEEEecccc
Confidence 4678999999999985 356677777899999999988 89999999999999998876655 999999987532
Q ss_pred -C----cc-----ChHHHHhhccC--Cce---EEEEecccCcccccccHHHHHHHHHhcCCEEEEeccccccc--ccc--
Q psy15216 122 -G----LI-----TLSQLEEKICS--DTI---LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGK--IDI-- 182 (2602)
Q Consensus 122 -~----~l-----d~e~l~~~i~~--~tk---lv~i~~~~npTG~~~~l~~I~~la~~~g~~livD~a~a~g~--~~~-- 182 (2602)
+ .+ |+++|++++++ ++| ++++++| |++|.++|+++|+++|++++ +++|+||+.+. .+.
T Consensus 268 ~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~ 344 (715)
T 3n75_A 268 AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (715)
T ss_dssp TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGT
T ss_pred ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCccc
Confidence 2 23 89999999973 445 8999999 99999999999999998774 79999998653 111
Q ss_pred cCC--CCC--ccEE---Eecccc-ccCCCCcEEEEEecCCCC-cccceecCCCccccccccCcchhHHHHHHHHHHHHHH
Q psy15216 183 NIQ--NYK--VDLM---SFSAHK-IYGPKGIGALYIRRNPRT-RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARI 253 (2602)
Q Consensus 183 dl~--~~~--~D~~---~~S~~K-~~Gp~G~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~ 253 (2602)
+.. ..+ +|++ +.|+|| +.|+.+.|+++++++... .+.... ..+.+++|+++.++++.+|++++..
T Consensus 345 ~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~~~------~~~~STSpsy~~~AsldaA~~~~~~ 418 (715)
T 3n75_A 345 GKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAY------MMHTTTSPHYGIVASTETAAAMMKG 418 (715)
T ss_dssp TSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHHHH------HHTSCSSCCHHHHHHHHHHHHHHSH
T ss_pred cccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHHHH------HhhcCCCchHHHHHHHHHHHHHHHh
Confidence 111 112 5755 889999 556878899999876321 121111 1234678999999999999987653
Q ss_pred -hHHHHHHHHHHHHHHHHHHHhhccCc------eEEeCCCCCCCCceEEEE-------EcccChhHHHHHhCCeEEcc-c
Q psy15216 254 -EMKEELKRILFLQKRLYNGLMESIEE------IYINGDMNNRIPHNLNIS-------FNFIEGESLLMAIKDIAVSS-G 318 (2602)
Q Consensus 254 -~~~~~~~~~~~l~~~l~~~L~~~~~g------~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~L~gI~v~~-g 318 (2602)
...+..++..++++++++.|.+ +++ ++++.+..-.....+.+. |..........+--++.+.. |
T Consensus 419 ~~g~~~~~~l~~~a~~~r~~L~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~ 497 (715)
T 3n75_A 419 NAGKRLINGSIERAIKFRKEIKR-LRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPG 497 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSC
T ss_pred hccHHHHHHHHHHHHHHHHHHHH-hhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCC
Confidence 4567888999999999999977 443 566654321111110000 00000000000001233322 2
Q ss_pred ccCCC-----CC--CChHHHHHHcCCCccCC-CCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 319 SACTS-----AS--LEPSYVLRALGCNDELA-HSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 319 ~~~~~-----~~--~~~~~~~~~~g~~~~~~-~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
....+ +. ......++..|+..+.. ...|=+-++..+|.+++++++++|.+.
T Consensus 498 ~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~L~~aL~~~ 556 (715)
T 3n75_A 498 MEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDF 556 (715)
T ss_dssp BCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCccccCCCcHHHHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 11000 00 01122345557655543 355666666778999999999999864
No 482
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.69 E-value=2.3e-16 Score=206.73 Aligned_cols=282 Identities=13% Similarity=0.067 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHh-CCC-----CCcEE--EeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEE
Q psy15216 1439 IEKARNEVAQLI-YAD-----PREII--WTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVT 1510 (2602)
Q Consensus 1439 ~~~lr~~ia~~~-g~~-----~~~iv--~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~ 1510 (2602)
..++|+++++++ |.+ +++|. .|.++++++..+...+. ...++||+|++++|.|+++...++.. |++++
T Consensus 81 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~-~~~~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~ 156 (409)
T 4eu1_A 81 IASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLN-RFVANCNRIYGPDVGYPNHESIFAKA---GMELT 156 (409)
T ss_dssp CHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGG-GTSSSCCEEEEESSCCTHHHHHHHHT---TCEEE
T ss_pred cHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHH-HhcCCCCEEEEeCCCcHhHHHHHHHc---CCeEE
Confidence 467899999976 665 67784 49999999988755332 23479999999999999987776665 99999
Q ss_pred Eecc--CCCCCcChhHHHhhcc---CCceEEEEeccccccccccC---hHHHHHHhhhcCCEEEEecccccCcc------
Q psy15216 1511 YLKP--KNNGLITLSQLEEKIC---SDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI------ 1576 (2602)
Q Consensus 1511 ~v~~--~~~~~id~d~l~~~i~---~~t~lv~l~~~~n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~g~~------ 1576 (2602)
.++. +.++.+|+++++++++ ++++++++++|+||||.++| +++|+++|++||+++|+|++|+....
T Consensus 157 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~ 236 (409)
T 4eu1_A 157 PYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYD 236 (409)
T ss_dssp EECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHH
T ss_pred EEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccc
Confidence 9987 3457799999999996 35677788999999999999 45599999999999999999763221
Q ss_pred --cc-cC-CCCCccEEEEccccccCCCc--eEEE--EEec-C----CCCccccccccCCccccCCCCCcchhHHHHHHHH
Q psy15216 1577 --DI-NI-QNYKVDLMSFSAHKIYGPKG--IGAL--YIRR-N----PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEA 1643 (2602)
Q Consensus 1577 --~~-~l-~~~~~D~~v~S~~K~~gp~G--~G~l--~~~~-~----~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~a 1643 (2602)
++ .+ ......+++.|++|.+|++| +||+ ++.+ + +++.+..... ....+++.....++..+
T Consensus 237 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 309 (409)
T 4eu1_A 237 AFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIR-------PMYNNPPLYGAWVVSSI 309 (409)
T ss_dssp THHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHH-------HHHSSCCHHHHHHHHHH
T ss_pred hHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHh-------hhcCCCChHHHHHHHHH
Confidence 11 11 11223477889999998888 7997 5543 3 3333322110 01124455556566666
Q ss_pred HHHH------HHHHHHHHHHHHHHHHHHHHHHhhc-CCc-EEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEcc
Q psy15216 1644 FRLA------RIEMKEELKRILFLQKRLYNGLMES-IEE-IYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSS 1713 (2602)
Q Consensus 1644 L~~~------~~~~~~~~~~~~~l~~~l~~~L~~~-~~g-l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~ 1713 (2602)
|+.. ...+++.++++.++++++.+.|.+. .++ +.+..+. ..++.+...+.+.+...+ +||.+.+
T Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~ll~~~gv~v~p 383 (409)
T 4eu1_A 310 LKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQ------VGMMAYTGLTREQVELLRSEYHIYMTL 383 (409)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHS------CSSEEECCCCHHHHHHHHHHHCEECCT
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCC------ceEEEEeCCCHHHHHHHHHcCCEEEcC
Confidence 6621 2346778889999999999999872 111 3332221 112334433333322222 5888763
Q ss_pred ccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1714 GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1714 g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+ .||+++.. +.+++++++++|++.
T Consensus 384 ~---------------------------~Ri~~~~~-~~~~i~~~~~~l~~~ 407 (409)
T 4eu1_A 384 N---------------------------GRAAVSGL-NSTNVEYVSQAIHNV 407 (409)
T ss_dssp T---------------------------CEEEGGGC-CTTTHHHHHHHHHHH
T ss_pred C---------------------------CEEEEEec-CHhhHHHHHHHHHHH
Confidence 2 38888765 456799999999863
No 483
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.69 E-value=6.2e-16 Score=204.07 Aligned_cols=327 Identities=13% Similarity=0.055 Sum_probs=193.5
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhc----c
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK----K 1480 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~----~ 1480 (2602)
.++.+.+++.+.++....+... .+ ......+++++++++++.++++|+||+|+++|+..++..+..... .
T Consensus 46 ~~p~v~~a~~~~~~~~~~~~~~-~~-----~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~ 119 (430)
T 3i4j_A 46 GRAEVGERMAAQAARLPFVHGS-QF-----SSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEP 119 (430)
T ss_dssp CCHHHHHHHHHHHHHCCCCCTT-TC-----EEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHhccccccc-cc-----CCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 3789999999988763211111 11 123567889999999998888999999999999999998762100 2
Q ss_pred CCCEEEEcCCCCcchHHHHHHHHhCCc------------EEEEeccCCC---CCcChhHHHhhcc----CCceEEEEecc
Q psy15216 1481 RGKHIITVQTEHKSVLDSIRKLENDGF------------RVTYLKPKNN---GLITLSQLEEKIC----SDTILVSVMLV 1541 (2602)
Q Consensus 1481 ~gd~Vlv~~~~~~s~~~~~~~~~~~G~------------~v~~v~~~~~---~~id~d~l~~~i~----~~t~lv~l~~~ 1541 (2602)
++++|++.++.|+++......+..... .+..++.+.. +..|+++|+++++ +++++|+++.+
T Consensus 120 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~ 199 (430)
T 3i4j_A 120 GRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPV 199 (430)
T ss_dssp TCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSS
T ss_pred CCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 478999999999886654433311100 1222332211 2246689999987 45667777777
Q ss_pred cc-ccccccC----hHHHHHHhhhcCCEEEEecccc-cCcc----cccCC-CCCccEEEEccccccCCCc---eEEEEEe
Q psy15216 1542 NN-EIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQ-NYKVDLMSFSAHKIYGPKG---IGALYIR 1607 (2602)
Q Consensus 1542 ~n-~tG~~~~----l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~-~~~~D~~v~S~~K~~gp~G---~G~l~~~ 1607 (2602)
++ ++|...+ +++|.++|++||+++|+|++|+ ++.. ..... ...+|+++ ++|.+++ | +|+++++
T Consensus 200 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t--~sK~l~~-G~~r~G~~~~~ 276 (430)
T 3i4j_A 200 VGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAV--LGKGLAA-GYAPLAGLLAA 276 (430)
T ss_dssp CCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEE--ECGGGTT-TSSCCEEEEEC
T ss_pred ccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEE--EcccccC-CccccEEEEEC
Confidence 77 8998777 9999999999999999999986 4321 11222 33467664 5696553 4 7999999
Q ss_pred cCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCCcEEEeCCCCC
Q psy15216 1608 RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME---SIEEIYINGDMNN 1684 (2602)
Q Consensus 1608 ~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~---~~~gl~i~~~~~~ 1684 (2602)
+++++.+.+..... ......+.+...+.+..++|+.... ++..++.+++.+++++.|.+ ..+++....+.
T Consensus 277 ~~i~~~~~~~~~~~---~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-- 349 (430)
T 3i4j_A 277 PQVYETVMGGSGAF---MHGFTYAGHPVSVAAGLSVLDIVER--EDLTGAAKERGAQLLAGLQALQARFPQMMQVRGT-- 349 (430)
T ss_dssp HHHHHHHHHTTCBC---CCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE--
T ss_pred HHHHHHHhccCCcc---cccCCCCCCHHHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE--
Confidence 87766654320000 0011224555666666677775433 23344444444444444433 14555443221
Q ss_pred CCCceEEEEEecC----------CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCH
Q psy15216 1685 RIPHNLNISFNFI----------EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTE 1752 (2602)
Q Consensus 1685 ~~~~~~~~~~~~~----------~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~ 1752 (2602)
..+..+.+... ...++...| +||.++++..+..+ ...+++||+++...|+
T Consensus 350 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~----------------~~~~~iRi~~~~~~t~ 411 (430)
T 3i4j_A 350 --GLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPN----------------GRGDHLLLGPPLSITA 411 (430)
T ss_dssp --TTEEEEEEC------------CHHHHHHHHHHTTEECC---------------------------CEEEECCCTTCCH
T ss_pred --EEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCC----------------CCCCEEEEECCCCCCH
Confidence 12233333211 113455555 89999876432211 1137899999988999
Q ss_pred HHHHHHHHHHHHh
Q psy15216 1753 KEIDFTIKLLKMK 1765 (2602)
Q Consensus 1753 edid~li~~L~~~ 1765 (2602)
+++++++++|++.
T Consensus 412 e~i~~~l~~l~~~ 424 (430)
T 3i4j_A 412 AEVDGLLALLAGA 424 (430)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999974
No 484
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.68 E-value=3.3e-15 Score=196.75 Aligned_cols=308 Identities=15% Similarity=0.142 Sum_probs=207.6
Q ss_pred CCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhh-----c
Q psy15216 1405 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY-----K 1479 (2602)
Q Consensus 1405 ~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~-----~ 1479 (2602)
.++.+.+++.+.++... +.+.. + ..+...++++++++++| .++++|++|+++|+..++.++.... .
T Consensus 93 ~~p~v~~Ai~~~~~~~~-~~~~~-~-----~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~al~~~~~~~~~~~g~ 163 (439)
T 2oat_A 93 CHPKIVNALKSQVDKLT-LTSRA-F-----YNNVLGEYEEYITKLFN--YHKVLPMNTGVEAGETACKLARKWGYTVKGI 163 (439)
T ss_dssp TCHHHHHHHHHHHTTCS-CCCTT-S-----EESSHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHhcC-cccCc-c-----CCHHHHHHHHHHHHhcC--CCEEEEeCCHHHHHHHHHHHHHHHhhhccCC
Confidence 67899999999887632 11111 1 12346788899999998 4689999999999999998875210 1
Q ss_pred cCC-CEEEEcCCCCcchHH-HHHHHH----hCC-----cEEEEeccCCCCCcChhHHHhhc-cCCceEEEEecccccccc
Q psy15216 1480 KRG-KHIITVQTEHKSVLD-SIRKLE----NDG-----FRVTYLKPKNNGLITLSQLEEKI-CSDTILVSVMLVNNEIGV 1547 (2602)
Q Consensus 1480 ~~g-d~Vlv~~~~~~s~~~-~~~~~~----~~G-----~~v~~v~~~~~~~id~d~l~~~i-~~~t~lv~l~~~~n~tG~ 1547 (2602)
.+| ++|+++++.|++... .+.... ..+ ..+..++. .|+++|++++ ++++++|++.++++++|.
T Consensus 164 ~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~~~vi~ep~~~~~G~ 238 (439)
T 2oat_A 164 QKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-----NDLPALERALQDPNVAAFMVEPIQGEAGV 238 (439)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-----SCHHHHHHHTTSTTEEEEEECSSBTTTTS
T ss_pred CCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-----CCHHHHHHHhCCCCEEEEEEECCCCCCCC
Confidence 356 899999999877533 332211 001 34555553 3899999999 578888888888888998
Q ss_pred cc----ChHHHHHHhhhcCCEEEEecccc-cCcc----cccCCCCCccEEEEccccccCCCc---eEEEEEecCCCCccc
Q psy15216 1548 IQ----PILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGPKG---IGALYIRRNPRTRIE 1615 (2602)
Q Consensus 1548 ~~----~l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~~~~~D~~v~S~~K~~gp~G---~G~l~~~~~~~~~l~ 1615 (2602)
+. ++++|.++|++||+++|+|++|. +|.. .++.....+|++ |++|.+|+ | +|++++++++++.+.
T Consensus 239 ~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~ 315 (439)
T 2oat_A 239 VVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALSG-GLYPVSAVLCDDDIMLTIK 315 (439)
T ss_dssp BCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTSC
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE--EecccccC-CCCCeEEEEECHHHHhccC
Confidence 77 59999999999999999999995 3211 112223347876 67795543 4 799999987766665
Q ss_pred cccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEeCCCCCCCCceEEEEE
Q psy15216 1616 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES-IEEIYINGDMNNRIPHNLNISF 1694 (2602)
Q Consensus 1616 ~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~-~~gl~i~~~~~~~~~~~~~~~~ 1694 (2602)
+... .. ..+.+...+++..++|+.... +...++..++.+++.+.|.+. .+.+... + ....+..+.+
T Consensus 316 ~~~~------~~-t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~---~~g~~~~v~l 382 (439)
T 2oat_A 316 PGEH------GS-TYGGNPLGCRVAIAALEVLEE--ENLAENADKLGIILRNELMKLPSDVVTAV-R---GKGLLNAIVI 382 (439)
T ss_dssp TTSS------CC-SSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHTTSCTTTEEEE-E---EETTEEEEEE
T ss_pred CCCc------cc-CCCcCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHhcCCCcEEE-E---eeeeEEEEEE
Confidence 4211 11 123455566666677775543 356778888999999999772 1211111 0 0123334444
Q ss_pred ecC---CcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1695 NFI---EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1695 ~~~---~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+.. +..++...| +||.++++. .+++|++++...|++|+++++++|++.
T Consensus 383 ~~~~~~~~~~l~~~l~~~Gv~v~~~~-----------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~ 435 (439)
T 2oat_A 383 KETKDWDAWKVCLRLRDNGLLAKPTH-----------------------GDIIRFAPPLVIKEDELRESIEIINKT 435 (439)
T ss_dssp CCCSSCCHHHHHHHHHHTTEECCBSS-----------------------SSEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ecCccHHHHHHHHHHHHCCeEEecCC-----------------------CCEEEEECccCCCHHHHHHHHHHHHHH
Confidence 432 245666665 799887531 278999999889999999999999873
No 485
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.68 E-value=8e-16 Score=207.81 Aligned_cols=309 Identities=13% Similarity=0.088 Sum_probs=205.1
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEEEEeccCC
Q psy15216 1437 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN 1516 (2602)
Q Consensus 1437 ~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v~~v~~~~ 1516 (2602)
..+.++++.+|+++|++ ..+++++|++.|+..+++++. ++||+|+++.+.|.|+...+... |+++++++.+.
T Consensus 195 g~i~eaE~~lA~~fGa~-~a~~v~nGts~An~~ai~al~----~pGD~VLv~r~~H~S~~~~l~ls---Ga~pv~v~~~~ 266 (715)
T 3n75_A 195 GPHKEAEQYIARVFNAD-RSYMVTNGTSTANKIVGMYSA----PAGSTILIDRNCHKSLTHLMMMS---DVTPIYFRPTR 266 (715)
T ss_dssp THHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHC----CTTCEEEEESSCCHHHHHHHHHS---CCEEEEECCCB
T ss_pred HHHHHHHHHHHHHhCCC-CceEECcHHHHHHHHHHHHhC----CCCCEEEECCCccHHHHHHHHHc---CCEEEEEeccc
Confidence 35789999999999985 245566676899999999987 89999999999999998876554 99999998753
Q ss_pred C-CC----c-----ChhHHHhhccC--Cce---EEEEeccccccccccChHHHHHHhhhcCCEEEEecccccCcc--cc-
Q psy15216 1517 N-GL----I-----TLSQLEEKICS--DTI---LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI--DI- 1578 (2602)
Q Consensus 1517 ~-~~----i-----d~d~l~~~i~~--~t~---lv~l~~~~n~tG~~~~l~~I~~ia~~~gi~vivD~a~~~g~~--~~- 1578 (2602)
+ +. + |+++|++++.+ +++ ++++++| |++|.++|+++|+++|++++ +++|+||+.+.. +.
T Consensus 267 ~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~ 343 (715)
T 3n75_A 267 NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIY 343 (715)
T ss_dssp CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGG
T ss_pred cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCcc
Confidence 2 22 3 89999999973 344 8999999 99999999999999998774 799999986531 11
Q ss_pred -cCCCC--C--ccEE---EEcccc-ccCCCceEEEEEecCCCC-ccccccccCCccccCCCCCcchhHHHHHHHHHHHHH
Q psy15216 1579 -NIQNY--K--VDLM---SFSAHK-IYGPKGIGALYIRRNPRT-RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLAR 1648 (2602)
Q Consensus 1579 -~l~~~--~--~D~~---v~S~~K-~~gp~G~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~ 1648 (2602)
+...+ + +|++ +.|+|| +.|+++.|+++++++... .+.... ..+.+++++++.++++.+|++++.
T Consensus 344 ~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~~~------~~~~STSpsy~~~AsldaA~~~~~ 417 (715)
T 3n75_A 344 EGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAY------MMHTTTSPHYGIVASTETAAAMMK 417 (715)
T ss_dssp TTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHHHH------HHTSCSSCCHHHHHHHHHHHHHHS
T ss_pred ccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHHHH------HhhcCCCchHHHHHHHHHHHHHHH
Confidence 11112 2 5755 889999 667878899999876321 111111 234567899999999999998765
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHhhcCCc------EEEeCCCCCCCCceEEEE-------EecCCcHH-HHHhcCCEEEcc
Q psy15216 1649 I-EMKEELKRILFLQKRLYNGLMESIEE------IYINGDMNNRIPHNLNIS-------FNFIEGES-LLMAIKDIAVSS 1713 (2602)
Q Consensus 1649 ~-~~~~~~~~~~~l~~~l~~~L~~~~~g------l~i~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~L~gI~v~~ 1713 (2602)
. ...+.+++..++.++++++|.+ +++ +.++.+..-.....+.+. |....... .++- -++.+..
T Consensus 418 ~~~g~~~~~~l~~~a~~~r~~L~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp-~Kl~i~~ 495 (715)
T 3n75_A 418 GNAGKRLINGSIERAIKFRKEIKR-LRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDP-IKVTLLT 495 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECT-TEEEEEC
T ss_pred hhccHHHHHHHHHHHHHHHHHHHH-hhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCC-eEEEEEc
Confidence 3 4566788889999999999977 443 466654321101110000 00000000 0011 2333332
Q ss_pred -ccccCC---CCCChh----HHHHHcCCCccccC-CeEEEecCCCCCHHHHHHHHHHHHH
Q psy15216 1714 -GSACTS---ASLEPS----YVLRALGCNDELAH-SSIRFTIGRFTTEKEIDFTIKLLKM 1764 (2602)
Q Consensus 1714 -g~~~~~---~~~~~~----~~~~~~~~~~~~~~-~~iRls~~~~~t~edid~li~~L~~ 1764 (2602)
|..... ..-.+. .++...++..+.+. ..|=+-++..+|.+++++++++|.+
T Consensus 496 ~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~L~~aL~~ 555 (715)
T 3n75_A 496 PGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTD 555 (715)
T ss_dssp SCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCccccCCCcHHHHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 211000 000111 12344566554432 5566667777899999999999987
No 486
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.68 E-value=3.3e-16 Score=203.83 Aligned_cols=254 Identities=14% Similarity=0.083 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHhCCCCCc--EEEeCCHHHHHHHHHHhcccccccCCCEEEEcC-CCCcccHHHHH-------HHHhCCc
Q psy15216 42 AIEKARNEVAQLIYADPRE--IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQ-TEHKSVLDSIR-------KLENDGF 111 (2602)
Q Consensus 42 ~~~~~r~~lA~~~g~~~~~--Iv~t~g~T~al~~~~~~l~~~~~~~gd~Vlv~~-~~~~s~~~~~~-------~~~~~G~ 111 (2602)
..+++++++++++|++... ++++ |+|+|+..++.++. ++||+|+++. +.|+++...+. .++..|+
T Consensus 66 ~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~----~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~ 140 (431)
T 3ht4_A 66 GRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGIL----RPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNI 140 (431)
T ss_dssp HHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTC----CTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTC
T ss_pred hHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhC----CCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCC
Confidence 3788999999999986432 2244 77999999999887 8999999998 99999876652 3345699
Q ss_pred EEEEeccCCCCccChHHHHhhccCCceEEEEec-ccCc---ccccccHHHHHHHHHh--cCCEEEEecccccccccccCC
Q psy15216 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVML-VNNE---IGVIQPILEIGELCRS--KGVIFHCDAAQAVGKIDINIQ 185 (2602)
Q Consensus 112 ~v~~v~~~~~~~ld~e~l~~~i~~~tklv~i~~-~~np---TG~~~~l~~I~~la~~--~g~~livD~a~a~g~~~~dl~ 185 (2602)
+++.++.++++.+|+++|+++++++|++|++++ ++|| +|...++++|+++|++ +|+++++|++|+.+.......
T Consensus 141 ~~~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~ 220 (431)
T 3ht4_A 141 GYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC 220 (431)
T ss_dssp EEEECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG
T ss_pred EEEEeCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc
Confidence 999999988899999999999999999999996 4444 5556678899999999 999999999998876433444
Q ss_pred CCCccEEEecccccc----CCCCcEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHH
Q psy15216 186 NYKVDLMSFSAHKIY----GPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKR 261 (2602)
Q Consensus 186 ~~~~D~~~~S~~K~~----Gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~ 261 (2602)
.+++|++++|+||.+ +++| |++++++++++.+.......+. ....+ +++.....+..++.. .....++
T Consensus 221 ~~g~Di~~~S~sK~lgg~~~~~G-G~v~~~~~li~~l~~~~~~~~~--g~~~~-~~~~~~~~~~~~l~~----~~~~~~~ 292 (431)
T 3ht4_A 221 HVGADLMAGSLIKNPGGGIVKTG-GYIVGKEQYVEACAYRLTSPGI--GAEAG-ASLYSLQEMYQGFFL----APHVAGQ 292 (431)
T ss_dssp GTTCSEEEEETTSGGGTTTCSSC-EEEEECHHHHHHHHHHHSCTTT--TTSCS-CCCSCSHHHHHHHHH----HHHHHHH
T ss_pred ccCCeEEEcCccccCCCCCCCce-EEEEecHHHHHHHHHHhccCCc--ccccC-ccHHHHHHHHhHhhh----HHHHHHH
Confidence 567899999999953 3677 9999998877776543211100 00111 111111222233332 3456667
Q ss_pred HHHHHHHHHHHHhhccCceEEeCCCCC-CCCceEEEEEcc-cChhHHHHHh
Q psy15216 262 ILFLQKRLYNGLMESIEEIYINGDMNN-RIPHNLNISFNF-IEGESLLMAI 310 (2602)
Q Consensus 262 ~~~l~~~l~~~L~~~~~g~~l~~~~~~-~~~~~~~~~~~~-~~~~~~~~~L 310 (2602)
..+++.++.+.|++ .++.+++.++. +...+..+.+.. ....++++.|
T Consensus 293 ~~~~a~~l~~~L~~--~g~~v~p~~~~~~~~li~~i~l~~~~~~~~~~~~l 341 (431)
T 3ht4_A 293 ALKGAIFTAAFLEK--LGMNTSPAWNAPRTDLIQSVQFDDKDRMIAFCQAI 341 (431)
T ss_dssp HHHHHHHHHHHHHH--HTCCEESCTTSCCSSSCCEEECCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--CcCEecCCCCCCCccEEEEEEeCCHHHHHHHHHHH
Confidence 77888888888877 34555433222 222344455442 1233455555
No 487
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.67 E-value=1.7e-15 Score=200.40 Aligned_cols=318 Identities=13% Similarity=0.106 Sum_probs=207.4
Q ss_pred CCHHHH-H-HHHH---HHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhC-CCCCcEEEeCCHHHHHHHHHHhhhhhh
Q psy15216 1405 IDPRVV-D-KMIP---YLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY-ADPREIIWTSGATESNNLAIKGAAHFY 1478 (2602)
Q Consensus 1405 ~~~~v~-e-al~~---~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g-~~~~~iv~t~gaT~al~~al~~l~~~~ 1478 (2602)
.++.++ + ++.+ .+....... . .+ ..+...+++++++++++ .++++|+|++|+++|++.++..+....
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~~~~~-~-~~-----~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~ 143 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALNKPSN-S-DV-----YSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWK 143 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTCCCCT-T-TC-----CCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCC-c-cc-----CCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHh
Confidence 478899 8 9988 554421111 1 11 12346788899999997 567899999999999999998653111
Q ss_pred c---------c-CCCEEEEcCCCCcchHHHHHHHH------hCCc-----EEEEeccCC--CC--------CcChhHHHh
Q psy15216 1479 K---------K-RGKHIITVQTEHKSVLDSIRKLE------NDGF-----RVTYLKPKN--NG--------LITLSQLEE 1527 (2602)
Q Consensus 1479 ~---------~-~gd~Vlv~~~~~~s~~~~~~~~~------~~G~-----~v~~v~~~~--~~--------~id~d~l~~ 1527 (2602)
- + +|++|+++++.|+++...+..+. +.+. .+..++.+. .. ..++++|++
T Consensus 144 ~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~ 223 (449)
T 2cjg_A 144 SRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARA 223 (449)
T ss_dssp HHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHH
Confidence 1 1 28999999999887544221110 1122 455555433 11 245667999
Q ss_pred hcc---CCceEEEEeccccccccccC----hHHHHHHhhhcCCEEEEecccc-cCcc----cccCCCCCccEEEEccccc
Q psy15216 1528 KIC---SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKI 1595 (2602)
Q Consensus 1528 ~i~---~~t~lv~l~~~~n~tG~~~~----l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~~~~~D~~v~S~~K~ 1595 (2602)
++. +++++|++++++|++|...+ +++|.++|++||+++|+|++|+ +|.. .++.....+|++ +++|.
T Consensus 224 ~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~ 301 (449)
T 2cjg_A 224 AFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--AFGKK 301 (449)
T ss_dssp HHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGG
T ss_pred HHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--EecCc
Confidence 884 68899999888899997667 9999999999999999999998 4322 112223356876 45696
Q ss_pred cCCCceEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---
Q psy15216 1596 YGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES--- 1672 (2602)
Q Consensus 1596 ~gp~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~--- 1672 (2602)
+ + +|++++++++++.+.+...+... .. ...+.+...+.+..++|+.... +...++..+++++++++|.+.
T Consensus 302 l--~-iG~~~~~~~~~~~l~~~~~~~~~-~~-~t~~~n~~~~~aa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~ 374 (449)
T 2cjg_A 302 T--Q-VCGVMAGRRVDEVADNVFAVPSR-LN-STWGGNLTDMVRARRILEVIEA--EGLFERAVQHGKYLRARLDELAAD 374 (449)
T ss_dssp G--S-SEEEEECGGGGGSTTCTTTSTTS-SC-CSSSSCHHHHHHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c--c-EEEEEECHHHhhhhhhcccCCcc-cc-cCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhh
Confidence 6 3 79999998877765442211110 11 1224456667777788875543 356677788888888888752
Q ss_pred CCc-EEEeCCCCCCCCceEEEEEec-CCcHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecCC
Q psy15216 1673 IEE-IYINGDMNNRIPHNLNISFNF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR 1748 (2602)
Q Consensus 1673 ~~g-l~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~ 1748 (2602)
.+. +....+ ...+..+.++. ....++...| +||.++++. .+++|++++.
T Consensus 375 ~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----------------------~~~iRi~~~~ 427 (449)
T 2cjg_A 375 FPAVVLDPRG----RGLMCAFSLPTTADRDELIRQLWQRAVIVLPAG-----------------------ADTVRFRPPL 427 (449)
T ss_dssp STTTSEEEEE----ETTEEEEECSSHHHHHHHHHHHHHTTEECEEET-----------------------TTEEEECCCT
T ss_pred CCCceeeEee----ccEEEEEEECChHHHHHHHHHHHHCCeEEecCC-----------------------CCEEEEECCC
Confidence 343 322211 12233333332 1234565555 799887642 1789999999
Q ss_pred CCCHHHHHHHHHHHHHh
Q psy15216 1749 FTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1749 ~~t~edid~li~~L~~~ 1765 (2602)
.+|++++++++++|++.
T Consensus 428 ~~t~e~i~~~l~~l~~~ 444 (449)
T 2cjg_A 428 TVSTAEIDAAIAAVRSA 444 (449)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 99999999999999874
No 488
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.67 E-value=2.3e-15 Score=194.31 Aligned_cols=349 Identities=12% Similarity=0.044 Sum_probs=221.3
Q ss_pred CcccHHHHHHHHHhcCCCccccceeeeeceeeecc-CCCCCCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHH
Q psy15216 1365 SPSKFIEIKNSLEMTGFKAESSGIVMRPYTNIVFK-DATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKAR 1443 (2602)
Q Consensus 1365 ~~~~~~~v~~aL~~~g~~~~~~ei~~iP~~~v~L~-~~~~~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr 1443 (2602)
+|+.+..+.+++++..-+..+..++ +|.+ +...+..+.|.++....++.... +. |. +.....++|
T Consensus 28 p~d~i~~l~~~~~~d~~~kinLgvG------~y~d~~g~~~vl~~Vk~A~~~~~~~~~~--~~--Y~----p~~G~p~lr 93 (420)
T 4h51_A 28 APDVIFDLAKRAAAAKGPKANLVIG------AYRDEQGRPYPLRVVRKAEQLLLDMNLD--YE--YL----PISGYQPFI 93 (420)
T ss_dssp CCCHHHHHHHHHHHCCSSCEECCSC------CCBCTTSCBCCCHHHHHHHHHHHHTTCC--CC--CC----CTTCCHHHH
T ss_pred CCChHHHHHHHHhcCCCCCEEeecC------cccCCCCCCCCCHHHHHHHHHHhcCCCC--CC--CC----CcCChHHHH
Confidence 3455667777777764444444444 2333 23345667888888777765321 10 11 112356788
Q ss_pred HHHHHHh-CC--CCCc--EEEeCCHHHHHHHHHHhhhhhhccCCCEEEEcCCCCcchHHHHHHHHhCCcEE-EEecc-C-
Q psy15216 1444 NEVAQLI-YA--DPRE--IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRV-TYLKP-K- 1515 (2602)
Q Consensus 1444 ~~ia~~~-g~--~~~~--iv~t~gaT~al~~al~~l~~~~~~~gd~Vlv~~~~~~s~~~~~~~~~~~G~~v-~~v~~-~- 1515 (2602)
+++++++ |- ..+. .+-|.|+|.|+..++..+.....+|||+|++++|.|++|...++.+ |++. ...+. +
T Consensus 94 ~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~a---G~~~V~~~~~~~~ 170 (420)
T 4h51_A 94 DEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAA---GWKNICTYAYYDP 170 (420)
T ss_dssp HHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHT---TCCCEEEEECEEG
T ss_pred HHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHc---CCeEEEeeccccc
Confidence 8888875 32 2223 3458899999998888776555689999999999999998887776 7653 33332 2
Q ss_pred CCCCcChhHHHhhc---cCCceEEEEeccccccccccC---hHHHHHHhhhcCCEEEEeccccc---Cccccc-------
Q psy15216 1516 NNGLITLSQLEEKI---CSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAV---GKIDIN------- 1579 (2602)
Q Consensus 1516 ~~~~id~d~l~~~i---~~~t~lv~l~~~~n~tG~~~~---l~~I~~ia~~~gi~vivD~a~~~---g~~~~~------- 1579 (2602)
.++.+|.+.+.+.+ ++++++++++.|+||||..++ +++|+++|++|+++++.|+++.. +....+
T Consensus 171 ~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~ 250 (420)
T 4h51_A 171 KTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLF 250 (420)
T ss_dssp GGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred cccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhH
Confidence 34567888887766 477889999999999999998 77889999999999999999742 111100
Q ss_pred CCCCCccEEEEccccccCCCc--eEEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHH--H----HHHHH
Q psy15216 1580 IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR--L----ARIEM 1651 (2602)
Q Consensus 1580 l~~~~~D~~v~S~~K~~gp~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~--~----~~~~~ 1651 (2602)
......-+++.||+|.|+++| +|++++..+..+........-....+....+++..+...+...+. . ....+
T Consensus 251 ~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~ 330 (420)
T 4h51_A 251 ARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAEL 330 (420)
T ss_dssp HHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred HhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 111123477789999888888 999999876544332211000000112234555555555555554 1 12346
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCc--EEEeCCCCCCCCceEEEEEecCCcHHHHHhc--CCEEEccccccCCCCCChhHH
Q psy15216 1652 KEELKRILFLQKRLYNGLMESIEE--IYINGDMNNRIPHNLNISFNFIEGESLLMAI--KDIAVSSGSACTSASLEPSYV 1727 (2602)
Q Consensus 1652 ~~~~~~~~~l~~~l~~~L~~~~~g--l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~ 1727 (2602)
+.+++++..+++.+.+.|.+..+. +.... +....|.+.+.+.+. ++.| ++|.+.++
T Consensus 331 ~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~------~q~GmF~~~gls~e~-v~~L~e~~Vy~~~~------------- 390 (420)
T 4h51_A 331 SAMAERIRTMRRTVYDELLRLQTPGSWEHVI------NQIGMFSFLGLSKAQ-CEYCQNHNIFITVS------------- 390 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCCTHHH------HCCSSEEECCCCHHH-HHHHHHTTEECCTT-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCeec------CCCceEEecCcCHHH-HHHHHhCCEEEcCC-------------
Confidence 778889999999999999872111 10000 111235555555443 3344 67765421
Q ss_pred HHHcCCCccccCCeEEEecCCCCCHHHHHHHHHHHHHh
Q psy15216 1728 LRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1728 ~~~~~~~~~~~~~~iRls~~~~~t~edid~li~~L~~~ 1765 (2602)
+ |||+.. .+.+.|++++++|.++
T Consensus 391 ------------g--Ris~Ag-l~~~ni~~~a~aI~~v 413 (420)
T 4h51_A 391 ------------G--RANMAG-LTHETALMLAQTINDA 413 (420)
T ss_dssp ------------C--EEEGGG-CCHHHHHHHHHHHHHH
T ss_pred ------------C--EEEecc-CCHHHHHHHHHHHHHH
Confidence 2 999865 4679999999999874
No 489
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.66 E-value=6.4e-15 Score=195.67 Aligned_cols=329 Identities=10% Similarity=0.008 Sum_probs=208.0
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccc---
Q psy15216 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--- 83 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~--- 83 (2602)
+..++.+.+++.+.+......... .....+...+++++++++++.++++|+|++|+++|+..++.++.....
T Consensus 66 G~~~p~v~~A~~~~~~~~~~~~~~-----~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g 140 (460)
T 3gju_A 66 GYGRQKIADAIATQAKNLAYYHAY-----VGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLG 140 (460)
T ss_dssp CBCCHHHHHHHHHHHHHHSCCCCC-----TTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhccccccc-----cccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcC
Confidence 345799999999988764211111 011123567889999999887778999999999999999998861100
Q ss_pred -cCCCEEEEcCCCCcccHHHHHHHHh----------CCcEEEEeccCC-----CCccC--------hHHHHhhcc----C
Q psy15216 84 -KRGKHIITVQTEHKSVLDSIRKLEN----------DGFRVTYLKPKN-----NGLIT--------LSQLEEKIC----S 135 (2602)
Q Consensus 84 -~~gd~Vlv~~~~~~s~~~~~~~~~~----------~G~~v~~v~~~~-----~~~ld--------~e~l~~~i~----~ 135 (2602)
.+++.|++.++.|+.+......+.. ....+..++... +...+ +++|+++++ +
T Consensus 141 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~ 220 (460)
T 3gju_A 141 RPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPE 220 (460)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGG
T ss_pred CCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCC
Confidence 2468999999999987655544411 011344454322 11122 688998886 5
Q ss_pred CceEEEEecccCccccccc----HHHHHHHHHhcCCEEEEecccc-ccccc----ccCCCCCccEEEeccccccCC--CC
Q psy15216 136 DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHKIYGP--KG 204 (2602)
Q Consensus 136 ~tklv~i~~~~npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~~----~dl~~~~~D~~~~S~~K~~Gp--~G 204 (2602)
++++|++..++|++|.+.+ +++|.++|++||+++|+|++|. +|... .+.....+|+++ ++|.++. -.
T Consensus 221 ~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t--~sK~l~gG~~~ 298 (460)
T 3gju_A 221 TIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLIT--IAKGLTSAYAP 298 (460)
T ss_dssp GEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--ECGGGTTTSSC
T ss_pred CEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeee--eehhhcCCCCC
Confidence 6788888888888898776 9999999999999999999987 43221 111223467765 5695543 23
Q ss_pred cEEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhhccCceEE
Q psy15216 205 IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYI 282 (2602)
Q Consensus 205 ~G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~g~~l 282 (2602)
+|++++++++++.+.+....+..-......+.+..+.++..++|+.... ..++..+....+++.+.+.+.+ .+.+..
T Consensus 299 lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~ 377 (460)
T 3gju_A 299 LSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGG-HKNVGE 377 (460)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTT-STTEEE
T ss_pred eEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc-CCCeEE
Confidence 7999999887776642100000000011234566677777788885432 2344444445555555555544 454443
Q ss_pred eCCCCCCCCceEEEEEcccC------------hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEE
Q psy15216 283 NGDMNNRIPHNLNISFNFIE------------GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRF 348 (2602)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi 348 (2602)
..+. ..+..+.+.... ...+...+ +||.++++. . .+++||
T Consensus 378 ~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~-------------------~~~iRi 431 (460)
T 3gju_A 378 VRGD----GMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP---Q-------------------GDILGF 431 (460)
T ss_dssp EEEE----TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS---S-------------------SCEEEE
T ss_pred Eeee----eEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC---C-------------------CCEEEE
Confidence 3221 123334443211 22444544 788887643 1 278999
Q ss_pred ecCCCCCHHHHHHHHHHHHhh
Q psy15216 349 TIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 349 s~~~~~t~edid~li~~L~~~ 369 (2602)
+++...|++++++++++|++.
T Consensus 432 ~~~~~~t~e~i~~~l~~l~~~ 452 (460)
T 3gju_A 432 APPLCLTREQADIVVSKTADA 452 (460)
T ss_dssp CCCTTCCHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHH
Confidence 998889999999999999964
No 490
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.66 E-value=1.3e-14 Score=192.00 Aligned_cols=324 Identities=13% Similarity=0.079 Sum_probs=195.6
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCC-
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG- 86 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~g- 86 (2602)
..++.+.+++.+.+.....+... ....+...+++++++++++...++|+|++|+++|+..++.++......+|
T Consensus 60 ~~~p~v~~A~~~~~~~~~~~~~~------~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~ 133 (448)
T 3dod_A 60 HRKKELDDAIKKQLGKIAHSTLL------GMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGK 133 (448)
T ss_dssp BSCHHHHHHHHHHHTTCSCCCCS------SSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHhccCcccc------ccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCC
Confidence 45899999999988753211111 11123567889999999977667999999999999999999872211144
Q ss_pred ---CEEEEcCCCCcccHHHHHHHHhC----------CcEEEEeccCCCCc-----------cChHHHHhhcc---CCceE
Q psy15216 87 ---KHIITVQTEHKSVLDSIRKLEND----------GFRVTYLKPKNNGL-----------ITLSQLEEKIC---SDTIL 139 (2602)
Q Consensus 87 ---d~Vlv~~~~~~s~~~~~~~~~~~----------G~~v~~v~~~~~~~-----------ld~e~l~~~i~---~~tkl 139 (2602)
|+|++.++.|++.......+... ...+..++.+..+. .|+++|+++++ +++++
T Consensus 134 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 213 (448)
T 3dod_A 134 PEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAA 213 (448)
T ss_dssp TTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred CCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEE
Confidence 99999999998765443332110 11233444333222 24889999986 56778
Q ss_pred EEEeccc-Cccccccc----HHHHHHHHHhcCCEEEEecccc-cccc----cccCCCCCccEEEeccccccCC--CCcEE
Q psy15216 140 VSVMLVN-NEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGP--KGIGA 207 (2602)
Q Consensus 140 v~i~~~~-npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~----~~dl~~~~~D~~~~S~~K~~Gp--~G~G~ 207 (2602)
|++..++ |++|.+.+ +++|.++|++||+++|+|++|+ +|.. ..+.....+|+++ ++|.+|+ -.+|+
T Consensus 214 vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t--~sK~l~~G~~~ig~ 291 (448)
T 3dod_A 214 LSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMA--AGKGITGGYLPIAV 291 (448)
T ss_dssp EEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGGTTSSCCEE
T ss_pred EEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEE--ecccccCCcCceEE
Confidence 8888887 99998877 9999999999999999999987 3321 1122233467664 5695543 23799
Q ss_pred EEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh--ccCceEEeCC
Q psy15216 208 LYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME--SIEEIYINGD 285 (2602)
Q Consensus 208 l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~--~~~g~~l~~~ 285 (2602)
+++++++++.+.+.......-......+.+..+.+++.++|+.... ++..++.+++.+++++.|.+ ..+.+....+
T Consensus 292 v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 369 (448)
T 3dod_A 292 TFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFES--ENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQ 369 (448)
T ss_dssp EEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE
T ss_pred EEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 9999887777654100000000011234566667777788875432 23444455555555555543 1343332211
Q ss_pred CCCCCCceEEEEEccc-C-----------hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecC
Q psy15216 286 MNNRIPHNLNISFNFI-E-----------GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG 351 (2602)
Q Consensus 286 ~~~~~~~~~~~~~~~~-~-----------~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~ 351 (2602)
...+..+.++.. . ...+...| +||.++++. +++|++++
T Consensus 370 ----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------------------~~iRi~~~ 421 (448)
T 3dod_A 370 ----LGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG------------------------DVIAFLPP 421 (448)
T ss_dssp ----ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET------------------------TEEEECCC
T ss_pred ----eeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC------------------------CEEEEECC
Confidence 122333444321 1 13455555 788887541 67999988
Q ss_pred CCCCHHHHHHHHHHHHhh
Q psy15216 352 RFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 352 ~~~t~edid~li~~L~~~ 369 (2602)
...+++++++++++|++.
T Consensus 422 ~~~t~e~i~~~l~~l~~~ 439 (448)
T 3dod_A 422 LASTAEELSEMVAIMKQA 439 (448)
T ss_dssp TTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 889999999999999974
No 491
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.66 E-value=2.4e-14 Score=190.08 Aligned_cols=327 Identities=13% Similarity=0.092 Sum_probs=206.0
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhh-cc--
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY-KK-- 1480 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~-~~-- 1480 (2602)
..++.+.+++.+.++.....+.. + ..+...+++++++++++.+.+ |+||+|+|+|+..++..+.... ..
T Consensus 65 ~~~p~v~~A~~~~~~~~~~~~~~--~-----~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~ 136 (452)
T 3n5m_A 65 YGRKELAEAAYKQLQTLSYFPMS--Q-----SHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANETAFKIARQYYAQKGE 136 (452)
T ss_dssp BCCHHHHHHHHHHHTTCCCCCTT--S-----EEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHHHhcCCcccc--c-----CCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHHHHHHHHHHHHHhcCC
Confidence 34789999999988753221111 1 124567889999999987666 9999999999999999876210 03
Q ss_pred -CCCEEEEcCCCCcchHHHHHHHHhC----------CcEEEEeccCCCCC---cC---------hhHHHhhcc----CCc
Q psy15216 1481 -RGKHIITVQTEHKSVLDSIRKLEND----------GFRVTYLKPKNNGL---IT---------LSQLEEKIC----SDT 1533 (2602)
Q Consensus 1481 -~gd~Vlv~~~~~~s~~~~~~~~~~~----------G~~v~~v~~~~~~~---id---------~d~l~~~i~----~~t 1533 (2602)
++++|++.++.|+++......+... ...+..++...... -| +++|+++++ +++
T Consensus 137 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~ 216 (452)
T 3n5m_A 137 PHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETI 216 (452)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGE
T ss_pred CCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCE
Confidence 6899999999998865444333110 01233444321111 12 899999997 667
Q ss_pred eEEEEecc-ccccccccC----hHHHHHHhhhcCCEEEEecccc-cCcc----cccCCCCCccEEEEccccccCC--Cce
Q psy15216 1534 ILVSVMLV-NNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGP--KGI 1601 (2602)
Q Consensus 1534 ~lv~l~~~-~n~tG~~~~----l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~~~~~D~~v~S~~K~~gp--~G~ 1601 (2602)
++|+++.+ +| +|.+.| +++|.++|++||+++|+|++|+ +|.. ..+.....+|+++ ++|.+++ -.+
T Consensus 217 ~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t--~sK~l~~G~~~i 293 (452)
T 3n5m_A 217 AAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIIT--MAKGITSAYLPL 293 (452)
T ss_dssp EEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGTTSSCC
T ss_pred EEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEe--ecccccCCCcce
Confidence 88888888 89 999887 9999999999999999999986 4321 1222333467765 5694432 347
Q ss_pred EEEEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCcEEE
Q psy15216 1602 GALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYI 1678 (2602)
Q Consensus 1602 G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~gl~i 1678 (2602)
|++++++++++.+.+.......... ...+.+...+++..++|+.... +...++.+++.+++++.|.+. .+.+..
T Consensus 294 g~~~~~~~i~~~~~~~~~~~~~~~~-~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 370 (452)
T 3n5m_A 294 SATAVKREIYEAFKGKGEYEFFRHI-NTFGGNPAACALALKNLEIIEN--ENLIERSAQMGSLLLEQLKEEIGEHPLVGD 370 (452)
T ss_dssp EEEEEEHHHHGGGCSSSTTCSCCCC-CSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred EEEEECHHHHHHHhhccCCCCcccc-CCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9999998877666431000000001 1123455566666677775433 334455555555665555431 344433
Q ss_pred eCCCCCCCCceEEEEEecC-C---------cHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEec
Q psy15216 1679 NGDMNNRIPHNLNISFNFI-E---------GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI 1746 (2602)
Q Consensus 1679 ~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~ 1746 (2602)
.... ..+..+.+... . ...+...| +||.++++..+... ..+++||++
T Consensus 371 ~~~~----g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~-----------------~~~~iRi~~ 429 (452)
T 3n5m_A 371 IRGK----GLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAG-----------------YNNILTLAP 429 (452)
T ss_dssp EEES----SSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTT-----------------CCCEEEECC
T ss_pred EEEE----EEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCC-----------------CCCEEEEEC
Confidence 3111 12233333211 0 12344444 89999987765332 137899999
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q psy15216 1747 GRFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1747 ~~~~t~edid~li~~L~~~ 1765 (2602)
+...|++++++++++|++.
T Consensus 430 ~~~~t~e~i~~~l~~l~~~ 448 (452)
T 3n5m_A 430 PLVISSEEIAFVIGTLKTA 448 (452)
T ss_dssp CTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 9889999999999999874
No 492
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.65 E-value=1.1e-15 Score=201.87 Aligned_cols=322 Identities=13% Similarity=0.046 Sum_probs=212.1
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhccccc---cc
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY---KK 84 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~---~~ 84 (2602)
-.+|.+.+++.+.+........ +....+...+++++++++++.+.++|+|++|+++|++.++..+.... -.
T Consensus 91 h~~p~v~~A~~~~~~~~~~~~~------~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~ 164 (457)
T 3tfu_A 91 HGHPALDQALTTQLRVMNHVMF------GGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGL 164 (457)
T ss_dssp BTCHHHHHHHHHHHHHCSCCCS------SSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHhccCccc------cccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCC
Confidence 4689999999998876322110 11122456789999999998777899999999999999998876110 00
Q ss_pred CC-CEEEEcCCCCcccHHHHHHHH-----------hCCcEEEEeccCC--CCccChHHHHhhcc---CCceEEEEec-cc
Q psy15216 85 RG-KHIITVQTEHKSVLDSIRKLE-----------NDGFRVTYLKPKN--NGLITLSQLEEKIC---SDTILVSVML-VN 146 (2602)
Q Consensus 85 ~g-d~Vlv~~~~~~s~~~~~~~~~-----------~~G~~v~~v~~~~--~~~ld~e~l~~~i~---~~tklv~i~~-~~ 146 (2602)
+| +.|++.++.|++.......+. .....+..++... ....|+++|+++++ +++++|++.. ++
T Consensus 165 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~ 244 (457)
T 3tfu_A 165 PGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQ 244 (457)
T ss_dssp TTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEE
T ss_pred CCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCc
Confidence 44 589998888887644333220 0011223333322 22358899999997 6788999999 99
Q ss_pred Cccccccc----HHHHHHHHHhcCCEEEEecccc-ccccc----ccCCCCCccEEEeccccccCC--CCcEEEEEecCCC
Q psy15216 147 NEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHKIYGP--KGIGALYIRRNPR 215 (2602)
Q Consensus 147 npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~~----~dl~~~~~D~~~~S~~K~~Gp--~G~G~l~~~~~~~ 215 (2602)
|++|.+.| +++|.++|++||+++|+|++|. +|... .+.....+|++ +++|.+|. ..+|+++++++++
T Consensus 245 ~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~gG~~~lG~v~~~~~i~ 322 (457)
T 3tfu_A 245 GAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTGGYLSLAATLCTADVA 322 (457)
T ss_dssp CTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCCEEEEEEHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE--EEChhhhCCCcceEEEEEcHHHH
Confidence 99999887 9999999999999999999986 33211 12223346777 66794432 2489999998877
Q ss_pred CcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc--cCceEEeCCCCCCCCce
Q psy15216 216 TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES--IEEIYINGDMNNRIPHN 293 (2602)
Q Consensus 216 ~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~--~~g~~l~~~~~~~~~~~ 293 (2602)
+.+.....+.. ......+.+..+.++..++|+.... +...++.+++.+++++.|.+. .+++...... ..+
T Consensus 323 ~~~~~~~~~~~--~~~~t~~~n~~a~aaa~aaL~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~----G~~ 394 (457)
T 3tfu_A 323 HTISAGAAGAL--MHGPTFMANPLACAVSVASVELLLG--QDWRTRITELAAGLTAGLDTARALPAVTDVRVC----GAI 394 (457)
T ss_dssp HHHHHSSSCSC--CCCCTTTTCHHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEEC----SSC
T ss_pred HHhhccCCCce--eEecCCCcCHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHhcCCCeeeeecC----CeE
Confidence 66631100000 0001234566677777788875443 355667777778888887652 2444332211 233
Q ss_pred EEEEEcc-cChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 294 LNISFNF-IEGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 294 ~~~~~~~-~~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
..+.++. .+..++...| +||.+++. .+++|+++....|++|+++++++|++.
T Consensus 395 ~~i~l~~~~~~~~~~~~l~~~Gv~v~~~------------------------~~~lRi~p~~~~t~eei~~~l~~L~~~ 449 (457)
T 3tfu_A 395 GVIECDRPVDLAVATPAALDRGVWLRPF------------------------RNLVYAMPPYICTPAEITQITSAMVEV 449 (457)
T ss_dssp EEEEESSCCCHHHHHHHHHHTTEECCCB------------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEECCcccHHHHHHHHHHCCeEEEec------------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4445543 2355666666 78888742 167999988888999999999999974
No 493
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.65 E-value=5.2e-15 Score=196.52 Aligned_cols=317 Identities=15% Similarity=0.078 Sum_probs=203.9
Q ss_pred CCCHHHHHHHHHHHhhhc-CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccc---
Q psy15216 8 PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--- 83 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~-~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~--- 83 (2602)
..+|.+.+++.+.+.... .++.. ....+...+++++++++++.+.++|+|++|+++|+..++.++.....
T Consensus 66 ~~~p~v~~A~~~~~~~~~~~~~~~------~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g 139 (459)
T 4a6r_A 66 YGRKDFAEAARRQMEELPFYNTFF------KTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQG 139 (459)
T ss_dssp BCCHHHHHHHHHHHHHCSCCCTTS------SSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHhcccccccc------ccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcC
Confidence 458999999999987632 11111 11234567889999999988788999999999999999999872100
Q ss_pred -cCCCEEEEcCCCCcccHHHHHHHHhC----------CcEEEEeccCC-----CCccC--------hHHHHhhcc----C
Q psy15216 84 -KRGKHIITVQTEHKSVLDSIRKLEND----------GFRVTYLKPKN-----NGLIT--------LSQLEEKIC----S 135 (2602)
Q Consensus 84 -~~gd~Vlv~~~~~~s~~~~~~~~~~~----------G~~v~~v~~~~-----~~~ld--------~e~l~~~i~----~ 135 (2602)
.+++.|++.++.|+++......+... ...+..++... ++ .| +++|+++++ +
T Consensus 140 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~~ 218 (459)
T 4a6r_A 140 KPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGAD 218 (459)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGG
T ss_pred CCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCCC
Confidence 15789999999999877655544111 01233444221 11 34 788988886 4
Q ss_pred CceEEEEecccCccccccc----HHHHHHHHHhcCCEEEEecccc-ccccc----ccCCCCCccEEEeccccccCC--CC
Q psy15216 136 DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHKIYGP--KG 204 (2602)
Q Consensus 136 ~tklv~i~~~~npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~~----~dl~~~~~D~~~~S~~K~~Gp--~G 204 (2602)
++++|++..+++++|.+.+ +++|.++|++||+++|+|++|. +|... .+.....+|+++ ++|.++. -.
T Consensus 219 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t--~sK~l~gg~~~ 296 (459)
T 4a6r_A 219 KVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFT--AAKGLSSGYLP 296 (459)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTSSC
T ss_pred CEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeee--hhhhhcCCCCC
Confidence 5677777777777888777 9999999999999999999986 33221 111223467775 5695443 23
Q ss_pred cEEEEEecCCCCcccc---eecCCCccccccccCcchhHHHHHHHHHHHHHH-h-HHHHH-HHHHHHHHHHHHHHhhccC
Q psy15216 205 IGALYIRRNPRTRIEA---QIHGGGHEYGLRSGTLATHQIVGMGEAFRLARI-E-MKEEL-KRILFLQKRLYNGLMESIE 278 (2602)
Q Consensus 205 ~G~l~~~~~~~~~l~~---~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~-~-~~~~~-~~~~~l~~~l~~~L~~~~~ 278 (2602)
+|++++++++++.+.+ ... ....+.+..+.+++.++|+.... . .++.. +....+++.+.+.|.. .+
T Consensus 297 lg~v~~~~~i~~~~~~~~~~~~-------~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~ 368 (459)
T 4a6r_A 297 IGAVFVGKRVAEGLIAGGDFNH-------GFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSR-FE 368 (459)
T ss_dssp CEEEEECHHHHHHHHHHCTTHH-------HHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTT-CT
T ss_pred ccceeeCHHHHHHhhcCCCccc-------CCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 8999999887776652 111 01234566667777788875432 1 33333 3444444444444443 45
Q ss_pred ceEEeCCCCCCCCceEEEEEcccC------------hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCC
Q psy15216 279 EIYINGDMNNRIPHNLNISFNFIE------------GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHS 344 (2602)
Q Consensus 279 g~~l~~~~~~~~~~~~~~~~~~~~------------~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (2602)
.+....+. ..+..+.+.... ...+...+ +||.++++. +
T Consensus 369 ~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g------------------------~ 420 (459)
T 4a6r_A 369 HVDDVRGV----GMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG------------------------D 420 (459)
T ss_dssp TEEEEEEE----TTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET------------------------T
T ss_pred CeEEEEEE----EEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC------------------------C
Confidence 44433221 123334443211 23444544 788887541 5
Q ss_pred eEEEecCCCCCHHHHHHHHHHHHhh
Q psy15216 345 SIRFTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 345 ~iRis~~~~~t~edid~li~~L~~~ 369 (2602)
++||+++...+++++++++++|++.
T Consensus 421 ~iRi~~~~~~t~e~i~~~l~~l~~~ 445 (459)
T 4a6r_A 421 HIVSAPPLVMTRAEVDEMLAVAERC 445 (459)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
Confidence 7999998889999999999999974
No 494
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.65 E-value=3.5e-16 Score=192.34 Aligned_cols=218 Identities=15% Similarity=0.136 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccceE-EEEEcCCCCHHHHHHHHHHHHHcCCceEEEechhHHHHHHhhhccCcccceEE
Q psy15216 743 IEISAQIFITLKKIAENAVNNRIFGA-VITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFA 821 (2602)
Q Consensus 743 ~ev~a~~L~~l~~~a~~~~~~~~~~~-ViTVPa~f~~~qr~~~~~Aa~~AGl~~~~li~EPtAAAl~y~~~~~~~~~~vl 821 (2602)
.++++.+|+.+++.+.... .++ .+++..+ ...++...++.|+||+|+++++..... ....
T Consensus 36 ~e~a~~vl~~~~~~a~~~~----~~~~~~a~t~~------------~~~a~~~~~~~Vne~~aha~a~~~~~~---~~~~ 96 (276)
T 4ehu_A 36 TTGPSRVLEKLYGKTGLAR----EDIKKVVVTGY------------GRMNYSDADKQISELSCHARGVNFIIP---ETRT 96 (276)
T ss_dssp SSHHHHHHHHHHHHHCCCG----GGEEEEEEEST------------TGGGCCSCSEECCHHHHHHHHHHHHST---TCCE
T ss_pred HHHHHHHHHHHHHHCCCcc----hhccccccCch------------HHHHhhCCCcccchHHHHHHHHHHhCC---CCCe
Confidence 3566677777777664332 222 2222221 124677889999999999998766543 3457
Q ss_pred EEEeCCceEEEEEEEEECCEEEEEEEecCCCCcchHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHH--Hcccccc
Q psy15216 822 VYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKE--LLSYQSS 899 (2602)
Q Consensus 822 V~D~GGGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~l~~~~e~~K~--~LS~~~~ 899 (2602)
|+|+|||+++++++. .++.+++....++...|+.+|++.+.+++...+... ..+ +.++|. .+++...
T Consensus 97 vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~~-------~~~---~~~a~~~~~i~~~~~ 165 (276)
T 4ehu_A 97 IIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSEL-------GSI---SMNSQNEVSISSTCT 165 (276)
T ss_dssp EEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGGH-------HHH---HTTCSSCCCCCCCSH
T ss_pred EEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChhhh-------HHH---HhcCCCCCCcCCccc
Confidence 999999999999885 577888999999999999999999988875443210 000 000000 0000000
Q ss_pred eEEEEEecCCceEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccchHHHHHHHHhhccCcccC
Q psy15216 900 VKLNVKLSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLT 979 (2602)
Q Consensus 900 ~~~~i~~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~a~~~~~~i~~V~LvGG~sr~P~v~~~l~~~f~~~~~~ 979 (2602)
. +..-......-.....++++..+.+.+.+.+.....+. ..++.|+|+||.+++|.||+.+++.|+.++..
T Consensus 166 ~-----f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~ 236 (276)
T 4ehu_A 166 V-----FAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIV 236 (276)
T ss_dssp H-----HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEEC
T ss_pred h-----hhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeee
Confidence 0 00000000000001124555555555555544444433 46788999999999999999999999999999
Q ss_pred cCCcchHhHHHHHHHhHHhc
Q psy15216 980 SIDPDKAVVFGAAIQANFLS 999 (2602)
Q Consensus 980 ~~~p~~aVa~GAa~~a~~l~ 999 (2602)
+.||++++|+|||++|....
T Consensus 237 p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 237 PDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp CSSGGGHHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHH
Confidence 99999999999999996543
No 495
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.64 E-value=3e-15 Score=197.81 Aligned_cols=308 Identities=12% Similarity=0.109 Sum_probs=196.6
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd 87 (2602)
..+|.+.+++.+.+.....+ . + +.+...+++++++++++ .+++|+|++|+|+|++.++..+.. ..+++
T Consensus 71 ~~~p~v~~a~~~~~~~~~~~--~--~-----~~~~~~~l~~~la~~~~-~~~~v~~~~sGsea~~~ai~~a~~--~~~~~ 138 (434)
T 3l44_A 71 HAHPHITKAITTAAENGVLY--G--T-----PTALEVKFAKMLKEAMP-ALDKVRFVNSGTEAVMTTIRVARA--YTGRT 138 (434)
T ss_dssp BTCHHHHHHHHHHHHHCSCC--S--S-----CCHHHHHHHHHHHHHCT-TCSEEEEESSHHHHHHHHHHHHHH--HHCCC
T ss_pred CCCHHHHHHHHHHHHhCcCC--C--C-----CCHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHHHHHH--hhCCC
Confidence 35899999999988763111 0 1 12356778889999987 678999999999999999988761 13678
Q ss_pred EEEEcCCCCcccHHHHHHHHhCCc-----------------EEEEeccCCCCccChHHHHhhcc---CCceEEEEecccC
Q psy15216 88 HIITVQTEHKSVLDSIRKLENDGF-----------------RVTYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVNN 147 (2602)
Q Consensus 88 ~Vlv~~~~~~s~~~~~~~~~~~G~-----------------~v~~v~~~~~~~ld~e~l~~~i~---~~tklv~i~~~~n 147 (2602)
+|++.++.|+++......+...+. .+..++. .|+++|+++++ +++++|+++.++|
T Consensus 139 ~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~ 213 (434)
T 3l44_A 139 KIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPF-----NNVETLKEALDKWGHEVAAILVEPIVG 213 (434)
T ss_dssp EEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEEEEEECSSBC
T ss_pred EEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCc-----ccHHHHHHHHHhCCCCEEEEEEcCCCC
Confidence 999999999876433222111011 1112221 18999999886 4677888888888
Q ss_pred ccccccc----HHHHHHHHHhcCCEEEEeccccc---ccc-cccCCCCCccEEEeccccccC-CCCcEEEEEecCCCCcc
Q psy15216 148 EIGVIQP----ILEIGELCRSKGVIFHCDAAQAV---GKI-DINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRI 218 (2602)
Q Consensus 148 pTG~~~~----l~~I~~la~~~g~~livD~a~a~---g~~-~~dl~~~~~D~~~~S~~K~~G-p~G~G~l~~~~~~~~~l 218 (2602)
++|.+.| +++|.++|++||+++|+|++|.. |.. ..+.....+|++ +++|.+| +-.+|++++++++++.+
T Consensus 214 ~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~~~G~~iG~~~~~~~i~~~~ 291 (434)
T 3l44_A 214 NFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLT--ALGKVIGGGLPIGAYGGKKEIMEQV 291 (434)
T ss_dssp TTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEE--EEEGGGGTTSSCEEEEECHHHHTTB
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCee--ehhhhhcCCcCeeeEEEcHHHHHhh
Confidence 8888888 99999999999999999999962 111 011122345655 5679554 22389999998887776
Q ss_pred cceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc---cCceEEeCCCCCCCCceEE
Q psy15216 219 EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLN 295 (2602)
Q Consensus 219 ~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~g~~l~~~~~~~~~~~~~ 295 (2602)
.+... .......+.+..+.+++.++++.... ++..++.+++.+++++.|.+. .+.+..... ...++.
T Consensus 292 ~~~~~----~~~~~t~~~~~~a~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~g~~~~ 361 (434)
T 3l44_A 292 APLGP----AYQAGTMAGNPASMASGIACLEVLQQ--EGLYEKLDELGATLEKGILEQAAKHNIDITLNR----LKGALT 361 (434)
T ss_dssp TTTSS----BCCCCTTTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE----ETTEEE
T ss_pred ccCCC----cccCCCCCcCHHHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEe----eccEEE
Confidence 54210 00111335666777777778875433 345556666666666666541 222111111 123344
Q ss_pred EEEcccC--------------hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q psy15216 296 ISFNFIE--------------GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 359 (2602)
Q Consensus 296 ~~~~~~~--------------~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edi 359 (2602)
+.+.... ...+...| +||.++++.. +.+|+++ ..|++|+
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----------------------~~~rl~~--~~t~e~i 416 (434)
T 3l44_A 362 VYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSKY-----------------------EAWFLTT--EHTKEDI 416 (434)
T ss_dssp EEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSSTT-----------------------CCEECCT--TCCHHHH
T ss_pred EEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecCC-----------------------CcEEEec--ccCHHHH
Confidence 4442111 13455555 7888875531 4588864 4699999
Q ss_pred HHHHHHHHhh
Q psy15216 360 DFTIKLLKMK 369 (2602)
Q Consensus 360 d~li~~L~~~ 369 (2602)
++++++|++.
T Consensus 417 ~~~l~~l~~~ 426 (434)
T 3l44_A 417 EYTIEAVGRA 426 (434)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999974
No 496
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.64 E-value=2.1e-14 Score=190.09 Aligned_cols=324 Identities=13% Similarity=0.083 Sum_probs=192.4
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCccchhHHHHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhhhhhhccCC-
Q psy15216 1404 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG- 1482 (2602)
Q Consensus 1404 ~~~~~v~eal~~~l~~~~~np~~~~~~~~~~~~~~~~~lr~~ia~~~g~~~~~iv~t~gaT~al~~al~~l~~~~~~~g- 1482 (2602)
..++.+.+++.+.++....+... .+ ..+...+++++++++++.+.++|+|++|+++|+..++..+.....++|
T Consensus 60 ~~~p~v~~A~~~~~~~~~~~~~~-~~-----~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~ 133 (448)
T 3dod_A 60 HRKKELDDAIKKQLGKIAHSTLL-GM-----TNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGK 133 (448)
T ss_dssp BSCHHHHHHHHHHHTTCSCCCCS-SS-----EEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHhccCcccc-cc-----CCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCC
Confidence 34789999999988764211111 11 123467888999999876667999999999999999998873211244
Q ss_pred ---CEEEEcCCCCcchHHHHHHHHhC----------CcEEEEeccCCCCCc-----------ChhHHHhhcc---CCceE
Q psy15216 1483 ---KHIITVQTEHKSVLDSIRKLEND----------GFRVTYLKPKNNGLI-----------TLSQLEEKIC---SDTIL 1535 (2602)
Q Consensus 1483 ---d~Vlv~~~~~~s~~~~~~~~~~~----------G~~v~~v~~~~~~~i-----------d~d~l~~~i~---~~t~l 1535 (2602)
|+|++.++.|+++......+... ...+..++.+..+.. |+++|++++. +++++
T Consensus 134 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 213 (448)
T 3dod_A 134 PEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAA 213 (448)
T ss_dssp TTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred CCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEE
Confidence 99999999998765433322110 012233443322222 4889999987 56678
Q ss_pred EEEeccc-cccccccC----hHHHHHHhhhcCCEEEEecccc-cCcc----cccCCCCCccEEEEccccccCC--CceEE
Q psy15216 1536 VSVMLVN-NEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGP--KGIGA 1603 (2602)
Q Consensus 1536 v~l~~~~-n~tG~~~~----l~~I~~ia~~~gi~vivD~a~~-~g~~----~~~l~~~~~D~~v~S~~K~~gp--~G~G~ 1603 (2602)
|++..++ |++|.+.| +++|.++|++||+++|+|++|+ +|.. ..+.....+|+++ ++|.+|+ -.+|+
T Consensus 214 vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t--~sK~l~~G~~~ig~ 291 (448)
T 3dod_A 214 LSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMA--AGKGITGGYLPIAV 291 (448)
T ss_dssp EEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGGTTSSCCEE
T ss_pred EEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEE--ecccccCCcCceEE
Confidence 8888887 89998777 9999999999999999999987 3321 1222233467665 5694432 13799
Q ss_pred EEEecCCCCccccccccCCccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCcEEEeCC
Q psy15216 1604 LYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME--SIEEIYINGD 1681 (2602)
Q Consensus 1604 l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~aL~~~~~~~~~~~~~~~~l~~~l~~~L~~--~~~gl~i~~~ 1681 (2602)
+++++++++.+.+..............+.+...+.+..++|+.... ++..++.+++.+++++.|.+ ..+.+.....
T Consensus 292 v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 369 (448)
T 3dod_A 292 TFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFES--ENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQ 369 (448)
T ss_dssp EEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE
T ss_pred EEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 9999887666654100000000011223455566666677775433 23344445555555555543 1343332211
Q ss_pred CCCCCCceEEEEEecC-C-----------cHHHHHhc--CCEEEccccccCCCCCChhHHHHHcCCCccccCCeEEEecC
Q psy15216 1682 MNNRIPHNLNISFNFI-E-----------GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG 1747 (2602)
Q Consensus 1682 ~~~~~~~~~~~~~~~~-~-----------~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~ 1747 (2602)
...+..+.++.. . ...+...| +||.++++. +++||+++
T Consensus 370 ----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------------------~~iRi~~~ 421 (448)
T 3dod_A 370 ----LGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG------------------------DVIAFLPP 421 (448)
T ss_dssp ----ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET------------------------TEEEECCC
T ss_pred ----eeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC------------------------CEEEEECC
Confidence 112233333321 1 13455555 788887541 67999998
Q ss_pred CCCCHHHHHHHHHHHHHh
Q psy15216 1748 RFTTEKEIDFTIKLLKMK 1765 (2602)
Q Consensus 1748 ~~~t~edid~li~~L~~~ 1765 (2602)
...|++++++++++|++.
T Consensus 422 ~~~t~e~i~~~l~~l~~~ 439 (448)
T 3dod_A 422 LASTAEELSEMVAIMKQA 439 (448)
T ss_dssp TTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 889999999999999974
No 497
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.64 E-value=3.9e-14 Score=187.33 Aligned_cols=318 Identities=13% Similarity=0.060 Sum_probs=200.8
Q ss_pred CCCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHhcccccccCC
Q psy15216 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKKRG 86 (2602)
Q Consensus 8 ~~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~-~~~Iv~t~g~T~al~~~~~~l~~~~~~~g 86 (2602)
..++.+.+++.+.+.....+.. .....+...+++++++++++.+ +++|+|++|+|+|++.++..+.. ...+
T Consensus 80 h~~p~v~~A~~~~~~~~~~~~~------~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~--~~g~ 151 (453)
T 4ffc_A 80 ASHPAVAAAIADQATHFTHTCF------MVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARL--ATGR 151 (453)
T ss_dssp TTCHHHHHHHHHHHHHCSCCTT------TTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHH--HHCC
T ss_pred CCCHHHHHHHHHHHHhcccccc------CcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHH--hcCC
Confidence 4589999999999876422211 1112345678899999999764 46899999999999999987651 1256
Q ss_pred CEEEEcCCCCcccHHHHHHHHhC-----------CcEEEEeccCC----CCcc--------ChHHHHhhccCCceEEEEe
Q psy15216 87 KHIITVQTEHKSVLDSIRKLEND-----------GFRVTYLKPKN----NGLI--------TLSQLEEKICSDTILVSVM 143 (2602)
Q Consensus 87 d~Vlv~~~~~~s~~~~~~~~~~~-----------G~~v~~v~~~~----~~~l--------d~e~l~~~i~~~tklv~i~ 143 (2602)
+.|++.++.|++.......+... ...+..++... .... +++.|++.+.+++.+++++
T Consensus 152 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ 231 (453)
T 4ffc_A 152 PAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIII 231 (453)
T ss_dssp CEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEE
T ss_pred CEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 89999999999876655544110 11345555431 1111 2467777776666555555
Q ss_pred cccCcc-ccccc----HHHHHHHHHhcCCEEEEecccc-ccccc----ccCCCCCccEEEeccccccCC-CCcEEEEEec
Q psy15216 144 LVNNEI-GVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHKIYGP-KGIGALYIRR 212 (2602)
Q Consensus 144 ~~~npT-G~~~~----l~~I~~la~~~g~~livD~a~a-~g~~~----~dl~~~~~D~~~~S~~K~~Gp-~G~G~l~~~~ 212 (2602)
.|.|++ |.+.+ +++|.++|++||+++|+|++|. ++... .+.....+|+++ ++|.+|+ -.+|++++++
T Consensus 232 ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t--~sK~~~~G~~~G~~~~~~ 309 (453)
T 4ffc_A 232 EPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVT--MAKGIAGGMPLSAVTGRA 309 (453)
T ss_dssp CSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEE--ECGGGGTTSSCEEEEEEH
T ss_pred cCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHh--hhhhhcCCcCeEEEEECH
Confidence 666655 55655 8999999999999999999986 33211 111123456664 5696544 2289999999
Q ss_pred CCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh---ccCceEEeCCCCCC
Q psy15216 213 NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME---SIEEIYINGDMNNR 289 (2602)
Q Consensus 213 ~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~---~~~g~~l~~~~~~~ 289 (2602)
++++.+.+...+ ...+.+..+.++..++|+.... ++..++.+++.+++++.|.+ ..+.+....+.
T Consensus 310 ~i~~~~~~~~~~-------~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~--- 377 (453)
T 4ffc_A 310 ELMDAVYAGGLG-------GTYGGNPVTCAAAVAALGVMRE--LDLPARARAIEASVTSRLSALAEEVDIIGEVRGR--- 377 (453)
T ss_dssp HHHTTSCTTSSC-------CSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEE---
T ss_pred HHHhhhcccCcC-------CCCCcCHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEee---
Confidence 887777653321 1234566666666678875432 23444444555555555443 14444333211
Q ss_pred CCceEEEEEcc-----c---ChhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q psy15216 290 IPHNLNISFNF-----I---EGESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 359 (2602)
Q Consensus 290 ~~~~~~~~~~~-----~---~~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edi 359 (2602)
..+..+.+.. . ....+...+ +||.++++..+ .+++|++++...+++|+
T Consensus 378 -g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~---------------------~~~iRi~~~~~~t~e~i 435 (453)
T 4ffc_A 378 -GAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTF---------------------GNVIRLLPPLVIGDDLL 435 (453)
T ss_dssp -TTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTT---------------------SCEEEECCCTTCCHHHH
T ss_pred -ceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCC---------------------CCEEEEECCCCCCHHHH
Confidence 1233344421 1 123455554 79998875321 26899999988999999
Q ss_pred HHHHHHHHhh
Q psy15216 360 DFTIKLLKMK 369 (2602)
Q Consensus 360 d~li~~L~~~ 369 (2602)
++++++|++.
T Consensus 436 ~~~l~~l~~~ 445 (453)
T 4ffc_A 436 DEGITALSDI 445 (453)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999964
No 498
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.64 E-value=4.1e-16 Score=205.54 Aligned_cols=306 Identities=14% Similarity=0.077 Sum_probs=193.9
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccccCCCE
Q psy15216 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (2602)
Q Consensus 9 ~p~~v~~a~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~~~gd~ 88 (2602)
.+|.+.+++.+.+.....+ ++ ..+...+++++++++++ ++++|++++|+++|+..++..+.. ...++.
T Consensus 69 ~~p~v~~a~~~~~~~~~~~--------~~-~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~~al~~a~~--~~~~~~ 136 (427)
T 3fq8_A 69 AHPEVIEALKVAMEKGTSF--------GA-PCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLRIMRA--YTGRDK 136 (427)
T ss_dssp TCHHHHHHHHHHHTTCSCC--------SS-CCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHH--HHCCCE
T ss_pred CCHHHHHHHHHHHHhCCCc--------CC-CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHH--hhCCCE
Confidence 5899999999988653211 11 23467788999999998 678999999999999999955431 124578
Q ss_pred EEEcCCCCcccHHHHHHHHh-----------CC------cEEEEeccCCCCccChHHHHhhccC---CceEEEEecccCc
Q psy15216 89 IITVQTEHKSVLDSIRKLEN-----------DG------FRVTYLKPKNNGLITLSQLEEKICS---DTILVSVMLVNNE 148 (2602)
Q Consensus 89 Vlv~~~~~~s~~~~~~~~~~-----------~G------~~v~~v~~~~~~~ld~e~l~~~i~~---~tklv~i~~~~np 148 (2602)
|++.++.|++.......+.. .| ..+..++.+ |+++|++++++ ++++|+++.++|+
T Consensus 137 vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~p~~~~ 211 (427)
T 3fq8_A 137 IIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-----DLEAVKALFAENPGEIAGVILEPIVGN 211 (427)
T ss_dssp EEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-----CHHHHHHHHHHSTTTEEEEEECSSBCT
T ss_pred EEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-----CHHHHHHHHHhCCCCEEEEEEcCCcCC
Confidence 88888888764322111100 00 012222221 89999999864 6889999999999
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEeccccc---cc-ccccCCCCCccEEEeccccccCCCC--cEEEEEecCCCCcc
Q psy15216 149 IGVIQP----ILEIGELCRSKGVIFHCDAAQAV---GK-IDINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRI 218 (2602)
Q Consensus 149 TG~~~~----l~~I~~la~~~g~~livD~a~a~---g~-~~~dl~~~~~D~~~~S~~K~~Gp~G--~G~l~~~~~~~~~l 218 (2602)
+|.+.| +++|.++|++||+++|+|++|+. |. ...+.....+|++ |++|.+| .| +|++++++++++.+
T Consensus 212 ~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~~-~G~~~G~~~~~~~~~~~~ 288 (427)
T 3fq8_A 212 SGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPDLT--TLGKIIG-GGLPVGAYGGKREIMQLV 288 (427)
T ss_dssp TSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCSEE--EECGGGG-TTSSCEEEEECHHHHTTB
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchhhHhcCCCCChh--hhhhhhh-CCcceEEEEEcHHHHHhh
Confidence 999999 99999999999999999999971 11 1112223346765 5569766 35 89999998887777
Q ss_pred cceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc---cCceEEeCCCCCCCCceEE
Q psy15216 219 EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLN 295 (2602)
Q Consensus 219 ~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~---~~g~~l~~~~~~~~~~~~~ 295 (2602)
.+.... ......+.+..+++++.++++.... ++..++.+++.+++++.|.+. .+....... ...+..
T Consensus 289 ~~~~~~----~~~~t~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~g~~~~ 358 (427)
T 3fq8_A 289 APAGPM----YQAGTLSGNPLAMTAGIKTLELLRQ--PGTYEYLDQITKRLSDGLLAIAQETGHAACGGQ----VSGMFG 358 (427)
T ss_dssp TTTSSB----CCCCTTTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEE----ETTEEE
T ss_pred ccCCCc----cccCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE----eeeEEE
Confidence 642100 0011224567777777778875432 345556666666666666541 111101100 112333
Q ss_pred EEEcccC--------------hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q psy15216 296 ISFNFIE--------------GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 359 (2602)
Q Consensus 296 ~~~~~~~--------------~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRis~~~~~t~edi 359 (2602)
+.+.... ...+...| +||.++++.. . |++++...+++|+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~-----------------------~--r~~~~~~~t~e~i 413 (427)
T 3fq8_A 359 FFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF-----------------------E--AGFTSLAHTEEDI 413 (427)
T ss_dssp EESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT-----------------------S--CEECCTTCCHHHH
T ss_pred EEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC-----------------------C--CEEeeCcCCHHHH
Confidence 3332211 12455555 7888875431 1 4455566899999
Q ss_pred HHHHHHHHhh
Q psy15216 360 DFTIKLLKMK 369 (2602)
Q Consensus 360 d~li~~L~~~ 369 (2602)
++++++|++.
T Consensus 414 ~~~l~~l~~~ 423 (427)
T 3fq8_A 414 DATLAAARTV 423 (427)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 499
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.63 E-value=1.1e-14 Score=193.14 Aligned_cols=320 Identities=13% Similarity=0.058 Sum_probs=206.3
Q ss_pred CCCCHHHHHHHHHHHhhhc-CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHhcccccc--
Q psy15216 7 TPIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (2602)
Q Consensus 7 ~~~p~~v~~a~~~~l~~~~-~~p~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~Iv~t~g~T~al~~~~~~l~~~~~-- 83 (2602)
+..+|.+.+++.+.+.... .++.. ....+...++.++++++++.+.++|+|++|+++|+..++..+.....
T Consensus 70 Gh~~p~v~~A~~~~~~~~~~~~~~~------~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~ 143 (472)
T 3hmu_A 70 GYGRDELAEVAARQMRELPYYNTFF------KTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNK 143 (472)
T ss_dssp CBCCHHHHHHHHHHHHHCSCCCSSS------SEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhcccccccc------ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhc
Confidence 3458999999999987632 11111 11224567889999999987777999999999999999998872100
Q ss_pred --cCCCEEEEcCCCCcccHHHHHHHHhC---------CcEEEEeccCCCCc----cC--------hHHHHhhcc----CC
Q psy15216 84 --KRGKHIITVQTEHKSVLDSIRKLEND---------GFRVTYLKPKNNGL----IT--------LSQLEEKIC----SD 136 (2602)
Q Consensus 84 --~~gd~Vlv~~~~~~s~~~~~~~~~~~---------G~~v~~v~~~~~~~----ld--------~e~l~~~i~----~~ 136 (2602)
.+++.|++.++.|+.+......+... ...+..++....+. .| +++|+++++ ++
T Consensus 144 g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 223 (472)
T 3hmu_A 144 GQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENR 223 (472)
T ss_dssp TCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred CCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 14689999999999876555444110 01244444322111 23 788888886 56
Q ss_pred ceEEEEecccCccccccc----HHHHHHHHHhcCCEEEEecccc-ccccc----ccCCCCCccEEEeccccccCC--CCc
Q psy15216 137 TILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHKIYGP--KGI 205 (2602)
Q Consensus 137 tklv~i~~~~npTG~~~~----l~~I~~la~~~g~~livD~a~a-~g~~~----~dl~~~~~D~~~~S~~K~~Gp--~G~ 205 (2602)
+++|++..+++++|.+.| +++|.++|++||+++|+|++|. +|... .......+|+++ ++|.+|. -.+
T Consensus 224 ~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t--~sK~l~gg~~pl 301 (472)
T 3hmu_A 224 VAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMT--IAKGLSSGYAPI 301 (472)
T ss_dssp EEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--ECGGGTTTSSCC
T ss_pred EEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceee--echhhhcCCcce
Confidence 788888888888999887 9999999999999999999986 43221 111233478875 4595543 237
Q ss_pred EEEEEecCCCCcccceecCCCccccccccCcchhHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHhhc--cCceEE
Q psy15216 206 GALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRIL-FLQKRLYNGLMES--IEEIYI 282 (2602)
Q Consensus 206 G~l~~~~~~~~~l~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~-~l~~~l~~~L~~~--~~g~~l 282 (2602)
|++++++++++.+.+... ......+.+..+.++..++|+.... +...++.+ ++.+++++.|.+. .+.+..
T Consensus 302 G~v~~~~~i~~~~~~~~~-----~~~~t~~~np~a~aAa~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~ 374 (472)
T 3hmu_A 302 GGSIVCDEVAHVIGKDEF-----NHGYTYSGHPVAAAVALENLRILEE--ENILDHVRNVAAPYLKEKWEALTDHPLVGE 374 (472)
T ss_dssp EEEEEEHHHHHHHTTSCB-----CCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHTHHHHHHHHHHGGGGSTTEEE
T ss_pred EEEEECHHHHHhcccCCc-----cccCCCCCCHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 999999887766632100 0001234566677777788875443 34555566 6666666666441 344433
Q ss_pred eCCCCCCCCceEEEEEcccC-------------hhHHHHHh--CCeEEcccccCCCCCCChHHHHHHcCCCccCCCCeEE
Q psy15216 283 NGDMNNRIPHNLNISFNFIE-------------GESLLMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (2602)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~L--~gI~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (2602)
..+. ..+..+.+.... ...+...| +||.++++. ++||
T Consensus 375 vr~~----G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g------------------------~~iR 426 (472)
T 3hmu_A 375 AKIV----GMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG------------------------DRMI 426 (472)
T ss_dssp EEEE----TTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET------------------------TEEE
T ss_pred EEec----CceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC------------------------CEEE
Confidence 2211 223334443210 22344444 687776431 5799
Q ss_pred EecCCCCCHHHHHHHHHHHHhh
Q psy15216 348 FTIGRFTTEKEIDFTIKLLKMK 369 (2602)
Q Consensus 348 is~~~~~t~edid~li~~L~~~ 369 (2602)
|++....|++|+++++++|++.
T Consensus 427 i~p~~~~t~e~i~~~l~~l~~~ 448 (472)
T 3hmu_A 427 ISPPLVITPAEIDEMFVRIRKS 448 (472)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 9988889999999999999974
No 500
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.63 E-value=5.7e-17 Score=208.90 Aligned_cols=212 Identities=17% Similarity=0.179 Sum_probs=92.0
Q ss_pred eEEEEEcCCCCHHHHHHHHHHH-HHcCCceEEEechhHHHHHHhhhccCcccceEEEEEeCCceEEEEEEEEECCEEEEE
Q psy15216 767 GAVITVPAYFNDIQRQFTKNAA-KLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVL 845 (2602)
Q Consensus 767 ~~ViTVPa~f~~~qr~~~~~Aa-~~AGl~~~~li~EPtAAAl~y~~~~~~~~~~vlV~D~GGGT~Dvsv~~~~~~~~~v~ 845 (2602)
.++||+|+.++..+|+++.+.+ +.+|++.+.+++||.||+++++.. +.+|+|+|+|||+++.+. +|.. +.
T Consensus 106 ~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~------~~lVVDiG~g~T~v~pv~--~G~~-~~ 176 (394)
T 1k8k_B 106 KILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLL------TGVVVDSGDGVTHICPVY--EGFS-LP 176 (394)
T ss_dssp ------------------------------------------------------CCEEEECSSCEEEECEE--TTEE-CS
T ss_pred cEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCc------eEEEEEcCCCceEeeeeE--CCEE-cc
Confidence 5999999999999999999865 788999999999999999988763 459999999999998663 4433 21
Q ss_pred EEecCCCCcchHHHHHHHHHHHHHH-hhcc-CCHHHHHHHHHHHHHHHHHcccc--------------cceEEEEEecCC
Q psy15216 846 SVGGDSNLGGDDFDYCLFSWIVKNA-FLKK-LSYKDVNILMIKSREIKELLSYQ--------------SSVKLNVKLSDK 909 (2602)
Q Consensus 846 ~~~g~~~lGG~~~D~~l~~~l~~~~-~~~~-~~~~~~~~l~~~~e~~K~~LS~~--------------~~~~~~i~~~~~ 909 (2602)
.......+||+++|+.|.+++.++. .... .+ ...+|++|+.+... ......+++.+|
T Consensus 177 ~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lpdg 249 (394)
T 1k8k_B 177 HLTRRLDIAGRDITRYLIKLLLLRGYAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDG 249 (394)
T ss_dssp TTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTTS
T ss_pred cceEEeeccHHHHHHHHHHHHHhcCCCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECCCC
Confidence 1123468999999999999997651 1100 12 23455566554321 111223445555
Q ss_pred ceEEEEeCHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC--ccccceEEEecCccchHHHHHHHHhhccC----
Q psy15216 910 KIVNITIDMKQF---FTITQHL-----VNRTILLSSKALMDANLT--IKDINNVILVGGSTRMKHIHEGVSNFFKT---- 975 (2602)
Q Consensus 910 ~~~~~~itr~~f---e~l~~~~-----~~~~~~~i~~~l~~a~~~--~~~i~~V~LvGG~sr~P~v~~~l~~~f~~---- 975 (2602)
. .++|++++| |.+++|. ...+.++|.+.|..+..+ ..-.+.|+|+||+|.+|.+.++|++.++.
T Consensus 250 ~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~ 327 (394)
T 1k8k_B 250 R--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLE 327 (394)
T ss_dssp C--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHH
T ss_pred C--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhh
Confidence 5 456777777 3344442 234677888888877433 33457899999999999999999877642
Q ss_pred ---------------cccCcCCcchHhHHHHHHHhH
Q psy15216 976 ---------------TLLTSIDPDKAVVFGAAIQAN 996 (2602)
Q Consensus 976 ---------------~~~~~~~p~~aVa~GAa~~a~ 996 (2602)
++..+.+|..++.+|++++|.
T Consensus 328 ~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 328 RVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HTCSSCCCTTCCCCC---------------------
T ss_pred hhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 223356788999999999885
Done!