Your job contains 1 sequence.
>psy15220
MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT
VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA
SISAAMRTIAGSARSMGIIFDKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRS
DQIVRGSIVLPFSTGKKIYIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVI
ASPESMHIVSSLGKILGPKGLMPNIKDGTLNSDILTAIKNAKSGQIRST
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15220
(289 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|CPS_4773 - symbol:CPS_4773 "ribosomal protein L1... 474 4.4e-45 1
TIGR_CMR|GSU_2867 - symbol:GSU_2867 "ribosomal protein L1... 473 5.6e-45 1
UNIPROTKB|Q9KV34 - symbol:rplK "50S ribosomal protein L11... 461 1.0e-43 1
TIGR_CMR|VC_0324 - symbol:VC_0324 "ribosomal protein L11"... 461 1.0e-43 1
UNIPROTKB|P0A7J7 - symbol:rplK "50S ribosomal subunit pro... 451 1.2e-42 1
TIGR_CMR|SO_0220 - symbol:SO_0220 "ribosomal protein L11"... 435 5.9e-41 1
TIGR_CMR|CBU_0226 - symbol:CBU_0226 "ribosomal protein L1... 425 6.8e-40 1
TIGR_CMR|CPS_4772 - symbol:CPS_4772 "ribosomal protein L1... 419 2.9e-39 1
TIGR_CMR|SPO_3514 - symbol:SPO_3514 "ribosomal protein L1... 416 6.1e-39 1
TIGR_CMR|CBU_0227 - symbol:CBU_0227 "ribosomal protein L1... 408 4.3e-38 1
TIGR_CMR|SO_0221 - symbol:SO_0221 "ribosomal protein L1" ... 408 4.3e-38 1
UNIPROTKB|P66056 - symbol:rplK "50S ribosomal protein L11... 407 5.5e-38 1
UNIPROTKB|P0A7L0 - symbol:rplA "50S ribosomal subunit pro... 402 1.9e-37 1
TIGR_CMR|BA_0097 - symbol:BA_0097 "ribosomal protein L11"... 399 3.9e-37 1
UNIPROTKB|Q9KV33 - symbol:rplA "50S ribosomal protein L1"... 397 6.3e-37 1
TIGR_CMR|VC_0325 - symbol:VC_0325 "ribosomal protein L1" ... 397 6.3e-37 1
TIGR_CMR|CJE_0524 - symbol:CJE_0524 "ribosomal protein L1... 393 1.7e-36 1
TIGR_CMR|CHY_2323 - symbol:CHY_2323 "ribosomal protein L1... 388 5.7e-36 1
TIGR_CMR|CJE_0525 - symbol:CJE_0525 "ribosomal protein L1... 385 1.2e-35 1
TAIR|locus:2037970 - symbol:PRPL11 "plastid ribosomal pro... 372 2.8e-34 1
TIGR_CMR|DET_0993 - symbol:DET_0993 "ribosomal protein L1... 371 3.6e-34 1
TIGR_CMR|SPO_3513 - symbol:SPO_3513 "ribosomal protein L1... 353 2.9e-32 1
TIGR_CMR|CHY_2322 - symbol:CHY_2322 "ribosomal protein L1... 331 6.2e-30 1
TIGR_CMR|GSU_2866 - symbol:GSU_2866 "ribosomal protein L1... 330 7.9e-30 1
TAIR|locus:2087388 - symbol:EMB3126 "EMBRYO DEFECTIVE 312... 313 5.0e-28 1
UNIPROTKB|Q06797 - symbol:rplA "50S ribosomal protein L1"... 312 6.4e-28 1
TIGR_CMR|BA_0098 - symbol:BA_0098 "ribosomal protein L1" ... 312 6.4e-28 1
TIGR_CMR|ECH_0955 - symbol:ECH_0955 "ribosomal protein L1... 307 2.2e-27 1
UNIPROTKB|P96932 - symbol:rplA "50S ribosomal protein L1"... 299 1.5e-26 1
POMBASE|SPAC1486.07c - symbol:mrpl19 "mitochondrial ribos... 299 1.5e-26 1
TIGR_CMR|APH_1027 - symbol:APH_1027 "ribosomal protein L1... 296 3.2e-26 1
TAIR|locus:2117627 - symbol:MRPL11 "mitochondrial ribosom... 296 3.2e-26 1
CGD|CAL0000474 - symbol:MRPL19 species:5476 "Candida albi... 291 1.1e-25 1
TIGR_CMR|ECH_0956 - symbol:ECH_0956 "ribosomal protein L1... 276 4.2e-24 1
UNIPROTKB|Q9Y3B7 - symbol:MRPL11 "39S ribosomal protein L... 269 2.3e-23 1
UNIPROTKB|F1RU54 - symbol:MRPL11 "Uncharacterized protein... 269 2.3e-23 1
UNIPROTKB|Q2YDI0 - symbol:MRPL11 "39S ribosomal protein L... 265 6.1e-23 1
ASPGD|ASPL0000056238 - symbol:AN0116 species:162425 "Emer... 261 1.6e-22 1
TAIR|locus:2041519 - symbol:AT2G42710 species:3702 "Arabi... 263 1.7e-22 1
RGD|1359665 - symbol:mrpl11 "mitochondrial ribosomal prot... 260 2.1e-22 1
UNIPROTKB|Q5XIE3 - symbol:Mrpl11 "39S ribosomal protein L... 260 2.1e-22 1
UNIPROTKB|E2RBT1 - symbol:MRPL11 "Uncharacterized protein... 259 2.6e-22 1
ZFIN|ZDB-GENE-040718-294 - symbol:mrpl11 "mitochondrial r... 257 4.3e-22 1
TIGR_CMR|DET_0992 - symbol:DET_0992 "ribosomal protein L1... 256 5.5e-22 1
MGI|MGI:2137215 - symbol:Mrpl11 "mitochondrial ribosomal ... 256 5.5e-22 1
FB|FBgn0038234 - symbol:mRpL11 "mitochondrial ribosomal p... 255 7.0e-22 1
SGD|S000005129 - symbol:MRPL19 "Mitochondrial ribosomal p... 251 1.9e-21 1
TIGR_CMR|APH_1028 - symbol:APH_1028 "ribosomal protein L1... 248 3.9e-21 1
WB|WBGene00015133 - symbol:mrpl-11 species:6239 "Caenorha... 240 2.7e-20 1
TAIR|locus:2153162 - symbol:AT5G51610 species:3702 "Arabi... 182 1.0e-18 2
TIGR_CMR|NSE_0682 - symbol:NSE_0682 "ribosomal protein L1... 202 2.9e-16 1
GENEDB_PFALCIPARUM|PF11_0113 - symbol:PF11_0113 "ribosoma... 180 8.4e-14 1
UNIPROTKB|Q8IIQ5 - symbol:PF11_0113 "Mitochondrial riboso... 180 8.4e-14 1
GENEDB_PFALCIPARUM|PFL0500w - symbol:PFL0500w "50S riboso... 176 2.5e-11 1
UNIPROTKB|Q8I5U9 - symbol:PFL0500w "Mitochondrial ribosom... 176 2.5e-11 1
ASPGD|ASPL0000012808 - symbol:AN8225 species:162425 "Emer... 174 3.2e-11 1
UNIPROTKB|E9PQB6 - symbol:MRPL11 "39S ribosomal protein L... 152 1.4e-10 1
DICTYBASE|DDB_G0294040 - symbol:mrpl11 "ribosomal protein... 141 2.5e-09 1
POMBASE|SPAC1610.02c - symbol:SPAC1610.02c "mitochondrial... 150 1.2e-08 1
TIGR_CMR|NSE_0681 - symbol:NSE_0681 "ribosomal protein L1... 142 3.0e-08 1
SGD|S000002523 - symbol:MRPL1 "Mitochondrial ribosomal pr... 139 4.0e-07 1
CGD|CAL0000752 - symbol:orf19.5698 species:5476 "Candida ... 134 1.3e-06 1
UNIPROTKB|H0Y8N7 - symbol:MRPL1 "39S ribosomal protein L1... 110 0.00055 1
>TIGR_CMR|CPS_4773 [details] [associations]
symbol:CPS_4773 "ribosomal protein L11" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
HSSP:Q5SLP6 RefSeq:YP_271417.1 ProteinModelPortal:Q47UV5 SMR:Q47UV5
STRING:Q47UV5 GeneID:3521266 KEGG:cps:CPS_4773 PATRIC:21472363
BioCyc:CPSY167879:GI48-4779-MONOMER Uniprot:Q47UV5
Length = 142
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 87/141 (61%), Positives = 112/141 (79%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KK+ IKLQ+ AG ANPSPP+GPALGQ G+NIMEFCK FNA+T +E G P+PV+IT
Sbjct: 1 MAKKVQALIKLQVAAGAANPSPPVGPALGQHGVNIMEFCKAFNAKTDSLEKGAPVPVVIT 60
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA 120
V+SD+SFTF+ K P +FL+KKAAGI+ GS +P++DKVG +T Q++EI K DLTA
Sbjct: 61 VYSDRSFTFETKTPPASFLLKKAAGIKSGSGRPNTDKVGTVTTAQLEEIVKTKEPDLTAG 120
Query: 121 SISAAMRTIAGSARSMGIIFD 141
S+ AA+RTIAGSARSMG++ +
Sbjct: 121 SLEAAVRTIAGSARSMGLVVE 141
>TIGR_CMR|GSU_2867 [details] [associations]
symbol:GSU_2867 "ribosomal protein L11" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:NP_953909.1 ProteinModelPortal:P62434 SMR:P62434
GeneID:2686756 KEGG:gsu:GSU2867 PATRIC:22028585
BioCyc:GSUL243231:GH27-2848-MONOMER Uniprot:P62434
Length = 141
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 94/138 (68%), Positives = 114/138 (82%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KKITG+IKLQIPA KANPSPPIGPALGQ G+NIMEFCK FNA+TQ E GT IPV+IT
Sbjct: 1 MAKKITGYIKLQIPAAKANPSPPIGPALGQHGVNIMEFCKAFNAKTQADE-GTIIPVVIT 59
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA 120
V++D+SFTF KV P++ LIKKA GI+ GS+ P+ +KVGKLT Q++EIAT K D+ AA
Sbjct: 60 VYADRSFTFITKVPPMSVLIKKAVGIESGSSVPNKNKVGKLTREQVREIATKKLPDMNAA 119
Query: 121 SISAAMRTIAGSARSMGI 138
S+ AAMRT+ G+ARSMG+
Sbjct: 120 SLEAAMRTVEGTARSMGV 137
>UNIPROTKB|Q9KV34 [details] [associations]
symbol:rplK "50S ribosomal protein L11" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 HAMAP:MF_00736_B PIR:B82338 RefSeq:NP_229978.1
ProteinModelPortal:Q9KV34 SMR:Q9KV34 DNASU:2615090 GeneID:2615090
KEGG:vch:VC0324 PATRIC:20079705 Uniprot:Q9KV34
Length = 142
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 85/141 (60%), Positives = 112/141 (79%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KK+ ++KLQ+ AG ANPSPP+GPALGQRG+NIMEFCK FNA+T+ +E G PIPV+IT
Sbjct: 1 MAKKVEAYVKLQVAAGMANPSPPVGPALGQRGVNIMEFCKAFNARTESLEKGLPIPVVIT 60
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA 120
V+SD+SFTF+ K P + L+KKAAGI+ GSA+P++ KVG +T QI+EIA K D+T A
Sbjct: 61 VYSDRSFTFETKTPPASVLLKKAAGIKSGSARPNTAKVGTITDAQIQEIAATKAADMTGA 120
Query: 121 SISAAMRTIAGSARSMGIIFD 141
I A R+IAG+ARSMG++ +
Sbjct: 121 DIEAMKRSIAGTARSMGLVVE 141
>TIGR_CMR|VC_0324 [details] [associations]
symbol:VC_0324 "ribosomal protein L11" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080 KO:K02867
OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 ProtClustDB:PRK00140
HAMAP:MF_00736_B PIR:B82338 RefSeq:NP_229978.1
ProteinModelPortal:Q9KV34 SMR:Q9KV34 DNASU:2615090 GeneID:2615090
KEGG:vch:VC0324 PATRIC:20079705 Uniprot:Q9KV34
Length = 142
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 85/141 (60%), Positives = 112/141 (79%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KK+ ++KLQ+ AG ANPSPP+GPALGQRG+NIMEFCK FNA+T+ +E G PIPV+IT
Sbjct: 1 MAKKVEAYVKLQVAAGMANPSPPVGPALGQRGVNIMEFCKAFNARTESLEKGLPIPVVIT 60
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA 120
V+SD+SFTF+ K P + L+KKAAGI+ GSA+P++ KVG +T QI+EIA K D+T A
Sbjct: 61 VYSDRSFTFETKTPPASVLLKKAAGIKSGSARPNTAKVGTITDAQIQEIAATKAADMTGA 120
Query: 121 SISAAMRTIAGSARSMGIIFD 141
I A R+IAG+ARSMG++ +
Sbjct: 121 DIEAMKRSIAGTARSMGLVVE 141
>UNIPROTKB|P0A7J7 [details] [associations]
symbol:rplK "50S ribosomal subunit protein L11"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0015968 "stringent response" evidence=IDA]
[GO:0006415 "translational termination" evidence=IMP] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0019843 "rRNA
binding" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U00006
GO:GO:0003735 GO:GO:0019843 GO:GO:0015968 GO:GO:0006415 PDB:2VHM
PDBsum:2VHM PDB:2RDO PDBsum:2RDO PDB:3EP2 PDB:3EQ3 PDB:3EQ4
PDBsum:3EP2 PDBsum:3EQ3 PDBsum:3EQ4 GO:GO:0022625 EMBL:V00339
PDB:3DEG PDBsum:3DEG EMBL:M30610 eggNOG:COG0080
HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632 PDB:3J0T
PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS
PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12
PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS ProtClustDB:PRK00140
HAMAP:MF_00736_B PIR:S12572 RefSeq:NP_418410.1 RefSeq:YP_491478.1
PDB:1EG0 PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4
PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM
PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK
PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L
PDB:2Z4N PDB:3DF2 PDB:3DF4 PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N
PDB:3I1P PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU
PDB:3J01 PDB:3J0D PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC
PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S
PDB:3R8T PDB:487D PDB:4GAR PDB:4GAU PDBsum:1EG0 PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V
PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC
PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV
PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ
PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B
PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R
PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3J0D PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS
PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR
PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T
PDBsum:487D PDBsum:4GAR PDBsum:4GAU ProteinModelPortal:P0A7J7
SMR:P0A7J7 DIP:DIP-35882N IntAct:P0A7J7 MINT:MINT-1232893
PaxDb:P0A7J7 PRIDE:P0A7J7 EnsemblBacteria:EBESCT00000004171
EnsemblBacteria:EBESCT00000015475 GeneID:12930523 GeneID:948484
KEGG:ecj:Y75_p3214 KEGG:eco:b3983 PATRIC:32123487 EchoBASE:EB0865
EcoGene:EG10872 BioCyc:EcoCyc:EG10872-MONOMER
BioCyc:ECOL316407:JW3946-MONOMER EvolutionaryTrace:P0A7J7
Genevestigator:P0A7J7 Uniprot:P0A7J7
Length = 142
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 83/141 (58%), Positives = 108/141 (76%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KK+ ++KLQ+ AG ANPSPP+GPALGQ+G+NIMEFCK FNA+T IE G PIPV+IT
Sbjct: 1 MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVIT 60
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA 120
V++D+SFTF K P L+KKAAGI+ GS KP+ DKVGK++ Q++EIA K D+T A
Sbjct: 61 VYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGA 120
Query: 121 SISAAMRTIAGSARSMGIIFD 141
I A R+I G+ARSMG++ +
Sbjct: 121 DIEAMTRSIEGTARSMGLVVE 141
>TIGR_CMR|SO_0220 [details] [associations]
symbol:SO_0220 "ribosomal protein L11" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:NP_715860.1 ProteinModelPortal:Q8EK78 SMR:Q8EK78
GeneID:1168103 KEGG:son:SO_0220 PATRIC:23520133 Uniprot:Q8EK78
Length = 142
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 78/141 (55%), Positives = 110/141 (78%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KKI +IKLQ+ +G ANPSPP+GPALGQ+G+NIMEFCK FNA+T+ +E G PIPV+IT
Sbjct: 1 MAKKIDAYIKLQVKSGSANPSPPVGPALGQKGVNIMEFCKAFNARTEKMEKGMPIPVVIT 60
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA 120
V+SD+SFTF+ K P ++L+K AAG++ GS +P++ KVG + +I+EIA +K D+T A
Sbjct: 61 VYSDRSFTFETKTPPASYLLKTAAGLKSGSPRPNTQKVGTIARAKIQEIAEMKAADMTGA 120
Query: 121 SISAAMRTIAGSARSMGIIFD 141
+ A R+I G+ARSMG++ +
Sbjct: 121 DVEAMTRSIEGTARSMGLVVE 141
>TIGR_CMR|CBU_0226 [details] [associations]
symbol:CBU_0226 "ribosomal protein L11" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:NP_819270.1 ProteinModelPortal:Q83ET4 SMR:Q83ET4
PRIDE:Q83ET4 GeneID:1208107 KEGG:cbu:CBU_0226 PATRIC:17929143
BioCyc:CBUR227377:GJ7S-232-MONOMER Uniprot:Q83ET4
Length = 145
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 84/139 (60%), Positives = 109/139 (78%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KKITG+I+LQI AG+ANPSPP+GPALGQ G+NI EFC++FN T+ IE G P PVIIT
Sbjct: 1 MAKKITGYIRLQIKAGEANPSPPVGPALGQHGVNIREFCESFNTATKNIEKGLPTPVIIT 60
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQK-GSAKPHSDKVGKLTYLQIKEIATIKNVDLTA 119
V++D++F+F K P + L+KK K GSA+P+++KVGK T Q++EIA +K DLTA
Sbjct: 61 VYADRTFSFITKTPPASVLLKKFVLKGKSGSARPNTEKVGKATRQQLEEIAKMKTPDLTA 120
Query: 120 ASISAAMRTIAGSARSMGI 138
A + AA+RTIAG+ARSMGI
Sbjct: 121 ADLEAAIRTIAGTARSMGI 139
>TIGR_CMR|CPS_4772 [details] [associations]
symbol:CPS_4772 "ribosomal protein L1" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_271416.1
ProteinModelPortal:Q47UV6 SMR:Q47UV6 STRING:Q47UV6 GeneID:3518789
KEGG:cps:CPS_4772 PATRIC:21472361
BioCyc:CPSY167879:GI48-4778-MONOMER Uniprot:Q47UV6
Length = 232
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 82/162 (50%), Positives = 118/162 (72%)
Query: 126 MRTIAGSARSMGIIFDKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVR 185
M ++ AR + D K Y + A++L+KE ATA F ES+D++++L ++ ++SDQ VR
Sbjct: 1 MAKLSKRARLIREKVDVTKEYDINEAVSLLKEFATANFRESVDVAVNLGIDARKSDQNVR 60
Query: 186 GSIVLPFSTGKKIYIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPES 245
G+ VLP TG+++ +A F E E+AK AGADIVGMEDLA ++K+ E++ D+VIASP++
Sbjct: 61 GATVLPNGTGREVRVAVFTQGENAEKAKAAGADIVGMEDLAAQVKAGEMNFDVVIASPDA 120
Query: 246 MHIVSSLGKILGPKGLMPNIKDGTLNSDILTAIKNAKSGQIR 287
M +V LG+ILGP+GLMPN K GT+ D+ A+KNAKSGQIR
Sbjct: 121 MRVVGQLGQILGPRGLMPNPKVGTVTPDVAGAVKNAKSGQIR 162
>TIGR_CMR|SPO_3514 [details] [associations]
symbol:SPO_3514 "ribosomal protein L11" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080 HOGENOM:HOG000082123
KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 ProtClustDB:PRK00140
HAMAP:MF_00736_B HSSP:P29395 RefSeq:YP_168709.1
ProteinModelPortal:Q5LMP9 SMR:Q5LMP9 GeneID:3195557
KEGG:sil:SPO3514 PATRIC:23380499 Uniprot:Q5LMP9
Length = 141
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 80/138 (57%), Positives = 99/138 (71%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KK+ G +KLQ+PAGKANPSPP+GPALGQRG+NIMEFCK FNA+T +E+G P P +I+
Sbjct: 1 MAKKLIGTLKLQVPAGKANPSPPVGPALGQRGINIMEFCKAFNAKTADMEVGAPCPTVIS 60
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA 120
+ DKSFT K P ++ +KKAA IQ G+ KP + G +T QI+EIA K DL A
Sbjct: 61 YYQDKSFTMDIKTPPASYFLKKAAKIQSGANKPSRETAGTVTVAQIREIAEAKMKDLNAN 120
Query: 121 SISAAMRTIAGSARSMGI 138
I AM+ I GSARSMGI
Sbjct: 121 DIDGAMQIILGSARSMGI 138
>TIGR_CMR|CBU_0227 [details] [associations]
symbol:CBU_0227 "ribosomal protein L1" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424 HAMAP:MF_01318_B
RefSeq:NP_819271.1 ProteinModelPortal:Q83ET3 SMR:Q83ET3
GeneID:1208108 KEGG:cbu:CBU_0227 PATRIC:17929145
BioCyc:CBUR227377:GJ7S-233-MONOMER Uniprot:Q83ET3
Length = 232
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 73/146 (50%), Positives = 111/146 (76%)
Query: 142 KNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYIA 201
++K Y AI LIKE A AKF+ESID++I+L ++ ++SDQ +RG+ VLP +G+ + +A
Sbjct: 18 RDKTYPLSEAIKLIKECAKAKFNESIDVAINLGIDSRKSDQAIRGATVLPHGSGRTVKVA 77
Query: 202 AFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGKILGPKGL 261
F + E+AK AGADIVG++DLA++I+ ++ D+VIA+PE+M +V LG++LGP+GL
Sbjct: 78 VFAQGDNVEKAKAAGADIVGLDDLAERIQGGDIDFDVVIATPETMRVVGKLGQVLGPRGL 137
Query: 262 MPNIKDGTLNSDILTAIKNAKSGQIR 287
MPN K GT+ +D+ +A+KNAK GQ+R
Sbjct: 138 MPNPKVGTVTTDVASAVKNAKQGQVR 163
>TIGR_CMR|SO_0221 [details] [associations]
symbol:SO_0221 "ribosomal protein L1" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:NP_715861.1
ProteinModelPortal:Q8EK77 SMR:Q8EK77 GeneID:1168104
KEGG:son:SO_0221 PATRIC:23520135 Uniprot:Q8EK77
Length = 233
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 75/147 (51%), Positives = 111/147 (75%)
Query: 141 DKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYI 200
D K+Y + A+ L+KE ATAKF ES+D++++L ++ ++SDQ VRG+ VLP TG+ + +
Sbjct: 16 DGTKLYEINDAVALLKELATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGRDVRV 75
Query: 201 AAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGKILGPKG 260
A F E AK AGA++VGM+DLA+KIK+ E++ D+VIASP++M +V LG+ILGP+G
Sbjct: 76 AVFTQGANAEAAKAAGAELVGMDDLAEKIKAGEMNFDVVIASPDAMRVVGMLGQILGPRG 135
Query: 261 LMPNIKDGTLNSDILTAIKNAKSGQIR 287
LMPN K GT+ ++ A+KNAK+GQ+R
Sbjct: 136 LMPNPKTGTVTPNVAEAVKNAKAGQVR 162
>UNIPROTKB|P66056 [details] [associations]
symbol:rplK "50S ribosomal protein L11" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 EMBL:BX842574
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080 HOGENOM:HOG000082123
KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 ProtClustDB:PRK00140
HAMAP:MF_00736_B PIR:E70613 RefSeq:NP_215154.1 RefSeq:NP_335080.1
RefSeq:YP_006513981.1 ProteinModelPortal:P66056 SMR:P66056
PRIDE:P66056 EnsemblBacteria:EBMYCT00000002861
EnsemblBacteria:EBMYCT00000069820 GeneID:13318526 GeneID:888045
GeneID:925952 KEGG:mtc:MT0669 KEGG:mtu:Rv0640 KEGG:mtv:RVBD_0640
PATRIC:18123193 TubercuList:Rv0640 Uniprot:P66056
Length = 142
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 80/136 (58%), Positives = 100/136 (73%)
Query: 3 KKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVF 62
KK+ G IKLQI AG+ANP+PP+GPALGQ G+NIMEFCK +NA T+ + G IPV ITV+
Sbjct: 5 KKVAGLIKLQIVAGQANPAPPVGPALGQHGVNIMEFCKAYNAATEN-QRGNVIPVEITVY 63
Query: 63 SDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAASI 122
D+SFTF K P L+ KAAG+ KGSA+PH KV K+T+ Q++EIA K DL A +
Sbjct: 64 EDRSFTFTLKTPPAAKLLLKAAGVAKGSAEPHKTKVAKVTWDQVREIAETKKTDLNANDV 123
Query: 123 SAAMRTIAGSARSMGI 138
AA + IAG+ARSMGI
Sbjct: 124 DAAAKIIAGTARSMGI 139
>UNIPROTKB|P0A7L0 [details] [associations]
symbol:rplA "50S ribosomal subunit protein L1"
species:83333 "Escherichia coli K-12" [GO:0015934 "large ribosomal
subunit" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
[GO:0045947 "negative regulation of translational initiation"
evidence=IDA] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0045947 GO:GO:0006412 EMBL:U00006 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 PDB:2RDO PDBsum:2RDO
EMBL:V00339 eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 PDB:1ML5 PDBsum:1ML5 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11
PDB:3J12 PDB:3J14 PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
PDBsum:3J12 PDBsum:3J14 PDB:1EG0 PDB:2GYA PDB:2GYC PDB:2WWQ
PDB:3E1B PDB:3E1D PDB:3FIK PDB:3IZT PDB:3IZU PDB:3J01 PDB:3KCR
PDB:487D PDBsum:1EG0 PDBsum:2GYA PDBsum:2GYC PDBsum:2WWQ
PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3KCR PDBsum:487D KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B PIR:S12573 RefSeq:NP_418411.1 RefSeq:YP_491477.1
ProteinModelPortal:P0A7L0 SMR:P0A7L0 DIP:DIP-35746N IntAct:P0A7L0
MINT:MINT-1268287 SWISS-2DPAGE:P0A7L0 PaxDb:P0A7L0 PRIDE:P0A7L0
EnsemblBacteria:EBESCT00000004739 EnsemblBacteria:EBESCT00000018368
GeneID:12930515 GeneID:948483 KEGG:ecj:Y75_p3213 KEGG:eco:b3984
PATRIC:32123489 EchoBASE:EB0857 EcoGene:EG10864
BioCyc:EcoCyc:EG10864-MONOMER BioCyc:ECOL316407:JW3947-MONOMER
EvolutionaryTrace:P0A7L0 Genevestigator:P0A7L0 Uniprot:P0A7L0
Length = 234
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 75/147 (51%), Positives = 108/147 (73%)
Query: 141 DKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYI 200
D K Y + AI L+KE ATAKF ES+D++++L ++ ++SDQ VRG+ VLP TG+ + +
Sbjct: 16 DATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRV 75
Query: 201 AAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGKILGPKG 260
A F E AK AGA++VGMEDLA +IK E++ D+VIASP++M +V LG++LGP+G
Sbjct: 76 AVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRG 135
Query: 261 LMPNIKDGTLNSDILTAIKNAKSGQIR 287
LMPN K GT+ ++ A+KNAK+GQ+R
Sbjct: 136 LMPNPKVGTVTPNVAEAVKNAKAGQVR 162
>TIGR_CMR|BA_0097 [details] [associations]
symbol:BA_0097 "ribosomal protein L11" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867
OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 RefSeq:NP_842665.1
RefSeq:YP_016700.2 RefSeq:YP_026383.1 ProteinModelPortal:Q81VU3
SMR:Q81VU3 DNASU:1086044 EnsemblBacteria:EBBACT00000008112
EnsemblBacteria:EBBACT00000017784 EnsemblBacteria:EBBACT00000023843
GeneID:1086044 GeneID:2814888 GeneID:2852743 KEGG:ban:BA_0097
KEGG:bar:GBAA_0097 KEGG:bat:BAS0097 ProtClustDB:PRK00140
BioCyc:BANT260799:GJAJ-108-MONOMER
BioCyc:BANT261594:GJ7F-110-MONOMER HAMAP:MF_00736_B Uniprot:Q81VU3
Length = 141
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 79/141 (56%), Positives = 101/141 (71%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KK+ +KLQIPAGKANP+PP+GPALGQ G+NIM FCK FNA+T + G IPV IT
Sbjct: 1 MAKKVIKMVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTAD-QAGLIIPVEIT 59
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA 120
VF D+SFTF K P L+KK AGI+ GS +P+ +KV + +++EIA K DL AA
Sbjct: 60 VFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAA 119
Query: 121 SISAAMRTIAGSARSMGIIFD 141
S+ AAMR + G+ARSMGI+ +
Sbjct: 120 SVEAAMRMVEGTARSMGIVIE 140
>UNIPROTKB|Q9KV33 [details] [associations]
symbol:rplA "50S ribosomal protein L1" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B PIR:C82338 RefSeq:NP_229979.1
ProteinModelPortal:Q9KV33 SMR:Q9KV33 GeneID:2615091 KEGG:vch:VC0325
PATRIC:20079707 Uniprot:Q9KV33
Length = 233
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/168 (47%), Positives = 113/168 (67%)
Query: 120 ASISAAMRTIAGSARSMGIIFDKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKR 179
A ++ MRTI D K Y + A+ L+KE ATAKF ES+D++++L ++ ++
Sbjct: 2 AKLTKRMRTIRAKV-------DVTKEYDINEAVALLKELATAKFVESVDVAVNLGIDARK 54
Query: 180 SDQIVRGSIVLPFSTGKKIYIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLV 239
SDQ VRG+ VLP TG+ I +A F E AK AGA++VGMEDLA +K E++ D+V
Sbjct: 55 SDQNVRGATVLPHGTGRDIRVAVFTQGANAEAAKAAGAELVGMEDLADLVKKGEMNFDVV 114
Query: 240 IASPESMHIVSSLGKILGPKGLMPNIKDGTLNSDILTAIKNAKSGQIR 287
IASP++M +V LG ILGP+GLMPN K GT+ ++ A+KNAK+GQ+R
Sbjct: 115 IASPDAMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVR 162
>TIGR_CMR|VC_0325 [details] [associations]
symbol:VC_0325 "ribosomal protein L1" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B PIR:C82338 RefSeq:NP_229979.1
ProteinModelPortal:Q9KV33 SMR:Q9KV33 GeneID:2615091 KEGG:vch:VC0325
PATRIC:20079707 Uniprot:Q9KV33
Length = 233
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/168 (47%), Positives = 113/168 (67%)
Query: 120 ASISAAMRTIAGSARSMGIIFDKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKR 179
A ++ MRTI D K Y + A+ L+KE ATAKF ES+D++++L ++ ++
Sbjct: 2 AKLTKRMRTIRAKV-------DVTKEYDINEAVALLKELATAKFVESVDVAVNLGIDARK 54
Query: 180 SDQIVRGSIVLPFSTGKKIYIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLV 239
SDQ VRG+ VLP TG+ I +A F E AK AGA++VGMEDLA +K E++ D+V
Sbjct: 55 SDQNVRGATVLPHGTGRDIRVAVFTQGANAEAAKAAGAELVGMEDLADLVKKGEMNFDVV 114
Query: 240 IASPESMHIVSSLGKILGPKGLMPNIKDGTLNSDILTAIKNAKSGQIR 287
IASP++M +V LG ILGP+GLMPN K GT+ ++ A+KNAK+GQ+R
Sbjct: 115 IASPDAMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVR 162
>TIGR_CMR|CJE_0524 [details] [associations]
symbol:CJE_0524 "ribosomal protein L11" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:YP_178542.1 HSSP:P29395 ProteinModelPortal:Q5HVZ3 SMR:Q5HVZ3
STRING:Q5HVZ3 GeneID:3231285 KEGG:cjr:CJE0524 PATRIC:20042770
BioCyc:CJEJ195099:GJC0-539-MONOMER Uniprot:Q5HVZ3
Length = 141
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 83/138 (60%), Positives = 98/138 (71%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KK+ G IKLQI A KANPSPP+GPALGQ+G+NIMEFCK FN +T+ + G IPV+IT
Sbjct: 1 MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNERTKDMA-GFNIPVVIT 59
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA 120
V++DKSFTF K P T LIKKAAGI KG+ P +KVGKLT Q+ EI K DL
Sbjct: 60 VYADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGKLTRAQVLEIVDKKIADLNTK 119
Query: 121 SISAAMRTIAGSARSMGI 138
A + IAGSARSMG+
Sbjct: 120 DRDQAAKIIAGSARSMGV 137
>TIGR_CMR|CHY_2323 [details] [associations]
symbol:CHY_2323 "ribosomal protein L11" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 HAMAP:MF_00736_B RefSeq:YP_361132.1
HSSP:Q5SLP6 ProteinModelPortal:Q3A9Q2 SMR:Q3A9Q2 STRING:Q3A9Q2
GeneID:3726209 KEGG:chy:CHY_2323 PATRIC:21277713
HOGENOM:HOG000082124 BioCyc:CHYD246194:GJCN-2322-MONOMER
Uniprot:Q3A9Q2
Length = 141
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 78/138 (56%), Positives = 99/138 (71%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KK+ +KLQIPAGKA P+PP+GPALGQ G+NIM F K +N +T + G IPV IT
Sbjct: 1 MAKKVVAVVKLQIPAGKATPAPPVGPALGQHGVNIMAFVKEYNERTAQ-QAGMIIPVEIT 59
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA 120
V+ D+SFTF K P + L+KKAAGI+ GS +P+ KVGK+T +I+EIA +K DL A
Sbjct: 60 VYEDRSFTFVTKTPPASDLLKKAAGIESGSGQPNKKKVGKVTRAKIREIAELKLKDLNAN 119
Query: 121 SISAAMRTIAGSARSMGI 138
+ AAMR I G+ARSMGI
Sbjct: 120 DVEAAMRMIEGTARSMGI 137
>TIGR_CMR|CJE_0525 [details] [associations]
symbol:CJE_0525 "ribosomal protein L1" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 GO:GO:0006412 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:YP_178543.1 ProteinModelPortal:Q5HVZ2
SMR:Q5HVZ2 STRING:Q5HVZ2 GeneID:3231286 KEGG:cjr:CJE0525
PATRIC:20042772 BioCyc:CJEJ195099:GJC0-540-MONOMER Uniprot:Q5HVZ2
Length = 233
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 75/161 (46%), Positives = 109/161 (67%)
Query: 126 MRTIAGSARSMGIIFDKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVR 185
M IA + + D NK Y+ AI IK +AKFDE+++I++ LNV+ + +DQ+VR
Sbjct: 1 MAKIAKRLKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVR 60
Query: 186 GSIVLPFSTGKKIYIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPES 245
GS+VLP TGKK+ +A K ++AK AGADIVG +DL ++I+ ++ D++IA+P
Sbjct: 61 GSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEIQKGNMNFDVLIATPNL 120
Query: 246 MHIVSSLGKILGPKGLMPNIKDGTLNSDILTAIKNAKSGQI 286
M +V +G+ILGPKGLMPN K GT+ D+ A+ NAKSGQ+
Sbjct: 121 MGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQV 161
>TAIR|locus:2037970 [details] [associations]
symbol:PRPL11 "plastid ribosomal protein l11"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0015995 "chlorophyll biosynthetic process"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009570
GO:GO:0016020 GO:GO:0006412 GO:GO:0009941 GO:GO:0003735
GO:GO:0022626 GO:GO:0019843 EMBL:AC006424 EMBL:AF325023
EMBL:AF412105 EMBL:AF370254 EMBL:AY063070 EMBL:AY085664
IPI:IPI00524837 PIR:E86454 RefSeq:NP_174575.1 UniGene:At.1364
ProteinModelPortal:Q9MAP3 SMR:Q9MAP3 STRING:Q9MAP3 PaxDb:Q9MAP3
PRIDE:Q9MAP3 ProMEX:Q9MAP3 EnsemblPlants:AT1G32990.1 GeneID:840194
KEGG:ath:AT1G32990 GeneFarm:81 TAIR:At1g32990 eggNOG:COG0080
HOGENOM:HOG000082123 InParanoid:Q9MAP3 KO:K02867 OMA:KQFNAKT
PhylomeDB:Q9MAP3 ProtClustDB:CLSN2912775 Genevestigator:Q9MAP3
GermOnline:AT1G32990 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 Uniprot:Q9MAP3
Length = 222
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 76/139 (54%), Positives = 97/139 (69%)
Query: 3 KKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVF 62
KK+ G IKL + AGKA P+PP+GPALG +G+NIM FCK++NA+T + G IPV ITVF
Sbjct: 72 KKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTAD-KAGYIIPVEITVF 130
Query: 63 SDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAASI 122
DKSFTF K P + L+ KAAG++KGS P DKVG +T Q++ IA K DL +I
Sbjct: 131 DDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNCTTI 190
Query: 123 SAAMRTIAGSARSMGIIFD 141
+AMR IAG+A +MGI D
Sbjct: 191 ESAMRIIAGTAANMGIDID 209
>TIGR_CMR|DET_0993 [details] [associations]
symbol:DET_0993 "ribosomal protein L11" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
HSSP:Q5SLP6 RefSeq:YP_181716.1 ProteinModelPortal:Q3Z7T3 SMR:Q3Z7T3
STRING:Q3Z7T3 GeneID:3229743 KEGG:det:DET0993 PATRIC:21609035
BioCyc:DETH243164:GJNF-994-MONOMER Uniprot:Q3Z7T3
Length = 140
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 73/138 (52%), Positives = 95/138 (68%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M KK+ +KLQIPAGKANP+PPIGPALGQ G+NIM FCK +N +T + GT +P IT
Sbjct: 1 MAKKVKAIVKLQIPAGKANPAPPIGPALGQHGINIMGFCKEYNDRTASMA-GTIVPAEIT 59
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAA 120
++ D+SFTF K P L+KKAAG++ GS P V ++ Q++EIA++K DL A
Sbjct: 60 IYDDRSFTFITKTPPAADLLKKAAGVEAGSGTPSKSVVAVISKGQLREIASVKMKDLNAV 119
Query: 121 SISAAMRTIAGSARSMGI 138
+I A R I G+ARSMGI
Sbjct: 120 NIEGAERIIEGTARSMGI 137
>TIGR_CMR|SPO_3513 [details] [associations]
symbol:SPO_3513 "ribosomal protein L1" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:YP_168708.1 ProteinModelPortal:Q5LMQ0
SMR:Q5LMQ0 GeneID:3194818 KEGG:sil:SPO3513 PATRIC:23380497
Uniprot:Q5LMQ0
Length = 232
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 68/141 (48%), Positives = 101/141 (71%)
Query: 147 SFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYIAAFVPK 206
S + A+ LIK AA+AKFDE+++I+++L V+ + +DQ+VRG + LP TGK + +A F
Sbjct: 22 SVEQAVALIKSAASAKFDETVEIAMNLGVDPRHADQMVRGVVGLPNGTGKTVRVAVFARG 81
Query: 207 EKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGKILGPKGLMPNIK 266
K E+A+ AGADIVG EDL + I+S ++ D IA+P+ M +V LGKILGP+ LMPN K
Sbjct: 82 PKAEEAQAAGADIVGAEDLMETIQSGKIEFDRCIATPDMMPVVGRLGKILGPRNLMPNPK 141
Query: 267 DGTLNSDILTAIKNAKSGQIR 287
GT+ D+ A++NAK G+++
Sbjct: 142 VGTVTMDVAQAVQNAKGGEVQ 162
>TIGR_CMR|CHY_2322 [details] [associations]
symbol:CHY_2322 "ribosomal protein L1" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 OMA:AKGRYVK
TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424 HAMAP:MF_01318_B
RefSeq:YP_361131.1 ProteinModelPortal:Q3A9Q3 SMR:Q3A9Q3
STRING:Q3A9Q3 GeneID:3728765 KEGG:chy:CHY_2322 PATRIC:21277711
BioCyc:CHYD246194:GJCN-2321-MONOMER Uniprot:Q3A9Q3
Length = 231
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 65/146 (44%), Positives = 97/146 (66%)
Query: 141 DKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYI 200
DK K+Y A +L+KE + AKFDE++++++ L V+ + +DQ VRG++VLP TGK +
Sbjct: 16 DKTKLYEPAEAFSLVKELSFAKFDETVEVAVKLGVDPRHADQQVRGAVVLPHGTGKTRKV 75
Query: 201 AAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGKILGPKG 260
F EK ++A+ AGAD VG E+ +KI + D+V+A+P+ M V LGKILGPKG
Sbjct: 76 LVFAKGEKAKEAEAAGADYVGAEEYIEKIAQGWIDFDVVVATPDMMGAVGRLGKILGPKG 135
Query: 261 LMPNIKDGTLNSDILTAIKNAKSGQI 286
LMP+ K GT+ ++ AI K+G+I
Sbjct: 136 LMPSPKTGTVTFEVAKAIAEIKAGKI 161
>TIGR_CMR|GSU_2866 [details] [associations]
symbol:GSU_2866 "ribosomal protein L1" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 GO:GO:0006412 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:NP_953908.1 ProteinModelPortal:Q748Y3
SMR:Q748Y3 GeneID:2686759 KEGG:gsu:GSU2866 PATRIC:22028583
BioCyc:GSUL243231:GH27-2847-MONOMER Uniprot:Q748Y3
Length = 234
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 62/146 (42%), Positives = 97/146 (66%)
Query: 141 DKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYI 200
D+++ Y I +K AA AKFDE++++++ L V+ + +DQ+VRG++VLP GK + +
Sbjct: 16 DRSRTYPLVEGIESVKSAAYAKFDETVEVAVRLGVDPRHADQMVRGAVVLPNGLGKDVRV 75
Query: 201 AAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGKILGPKG 260
F EK ++A+ AGAD VG EDL KI+ D IA+P+ M +V +GK+LGP+G
Sbjct: 76 LVFAKGEKEKEAREAGADYVGAEDLVTKIQEGWFEFDTAIATPDMMGVVGKIGKLLGPRG 135
Query: 261 LMPNIKDGTLNSDILTAIKNAKSGQI 286
LMPN K GT+ D+ A+K +K+G++
Sbjct: 136 LMPNPKVGTVTFDVGRAVKESKAGKV 161
>TAIR|locus:2087388 [details] [associations]
symbol:EMB3126 "EMBRYO DEFECTIVE 3126" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0006098 "pentose-phosphate
shunt" evidence=RCA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0015979 "photosynthesis"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0034660
"ncRNA metabolic process" evidence=RCA] [GO:0042793 "transcription
from plastid promoter" evidence=RCA] [GO:0045036 "protein targeting
to chloroplast" evidence=RCA] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 Prosite:PS01199 GO:GO:0005634 GO:GO:0009570
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0009941
EMBL:AL163818 GO:GO:0003735 GO:GO:0009535 GO:GO:0019843
GO:GO:0015934 SUPFAM:SSF56808 UniGene:At.24203 UniGene:At.69654
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 EMBL:X90855 EMBL:BT001191 EMBL:AY133519
EMBL:AY059929 EMBL:AY053410 IPI:IPI00522851 PIR:T49190 PIR:T51934
RefSeq:NP_191908.1 HSSP:Q5SLP7 ProteinModelPortal:Q9LY66 SMR:Q9LY66
STRING:Q9LY66 PaxDb:Q9LY66 PRIDE:Q9LY66 ProMEX:Q9LY66
EnsemblPlants:AT3G63490.1 GeneID:825524 KEGG:ath:AT3G63490
GeneFarm:61 TAIR:At3g63490 HOGENOM:HOG000207015 InParanoid:Q9LY66
OMA:AKGRYVK PhylomeDB:Q9LY66 ProtClustDB:CLSN2914724
Genevestigator:Q9LY66 TIGRFAMs:TIGR01169 Uniprot:Q9LY66
Length = 346
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 63/146 (43%), Positives = 97/146 (66%)
Query: 141 DKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYI 200
+ K Y ++AI+L+K+ A +F ES++ LN++ K +DQ +R ++ LP TG+ + +
Sbjct: 124 ETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRATVSLPKGTGQTVIV 183
Query: 201 AAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGKILGPKG 260
A EK ++AK AGADIVG +DL ++IK + D +IASP+ M V+ LGKILGP+G
Sbjct: 184 AVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMMVKVAGLGKILGPRG 243
Query: 261 LMPNIKDGTLNSDILTAIKNAKSGQI 286
LMPN K GT+ ++I AI+ K G++
Sbjct: 244 LMPNPKAGTVTANIPQAIEEFKKGKV 269
>UNIPROTKB|Q06797 [details] [associations]
symbol:rplA "50S ribosomal protein L1" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 GO:GO:0003735 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
KO:K02863 ProtClustDB:PRK05424 HAMAP:MF_01318_B EMBL:D13303
EMBL:D50303 PIR:E69694 RefSeq:NP_387984.2 ProteinModelPortal:Q06797
SMR:Q06797 EnsemblBacteria:EBBACT00000001732 GeneID:936843
KEGG:bsu:BSU01030 PATRIC:18971715 GenoList:BSU01030
BioCyc:BSUB:BSU01030-MONOMER Uniprot:Q06797
Length = 232
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 58/148 (39%), Positives = 95/148 (64%)
Query: 139 IFDKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKI 198
+ D++K Y A+ L+K+ TAKFD +++++ L V+ +++DQ +RG++VLP TGK
Sbjct: 14 LVDRSKAYDVSEAVALVKKTNTAKFDATVEVAFRLGVDPRKNDQQIRGAVVLPNGTGKTQ 73
Query: 199 YIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGKILGP 258
+ F EK ++A+ AGAD VG D KI+ D+++A+P+ M V +G++LGP
Sbjct: 74 RVLVFAKGEKAKEAEAAGADFVGDTDYINKIQQGWFDFDVIVATPDMMGEVGKIGRVLGP 133
Query: 259 KGLMPNIKDGTLNSDILTAIKNAKSGQI 286
KGLMPN K GT+ ++ AI K+G++
Sbjct: 134 KGLMPNPKTGTVTFEVEKAIGEIKAGKV 161
>TIGR_CMR|BA_0098 [details] [associations]
symbol:BA_0098 "ribosomal protein L1" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:NP_842666.1 RefSeq:YP_016701.1
RefSeq:YP_026384.1 ProteinModelPortal:Q81VU2 SMR:Q81VU2
DNASU:1087066 EnsemblBacteria:EBBACT00000011718
EnsemblBacteria:EBBACT00000017677 EnsemblBacteria:EBBACT00000020059
GeneID:1087066 GeneID:2814891 GeneID:2848851 KEGG:ban:BA_0098
KEGG:bar:GBAA_0098 KEGG:bat:BAS0098
BioCyc:BANT260799:GJAJ-109-MONOMER
BioCyc:BANT261594:GJ7F-111-MONOMER Uniprot:Q81VU2
Length = 230
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 61/148 (41%), Positives = 93/148 (62%)
Query: 139 IFDKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKI 198
+ D+ YS A+ L+K+ TAKFD +++ + L V+ K++DQ +RG++VLP TGK
Sbjct: 14 LVDRAAAYSATEAVELVKKTNTAKFDATVEAAFRLGVDPKKADQQIRGAVVLPHGTGKVQ 73
Query: 199 YIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGKILGP 258
+ F EK ++A+ AGAD VG D KI+ D+V+A+P+ M V LG++LGP
Sbjct: 74 RVLVFAKGEKAKEAEAAGADFVGDADYIGKIQQGWFDFDVVVATPDMMGEVGKLGRVLGP 133
Query: 259 KGLMPNIKDGTLNSDILTAIKNAKSGQI 286
KGLMPN K GT+ D+ A+ K+G++
Sbjct: 134 KGLMPNPKTGTVTFDVTKAVNEIKAGKV 161
>TIGR_CMR|ECH_0955 [details] [associations]
symbol:ECH_0955 "ribosomal protein L1" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_507743.1
ProteinModelPortal:Q2GFP0 STRING:Q2GFP0 GeneID:3927409
KEGG:ech:ECH_0955 PATRIC:20577292
BioCyc:ECHA205920:GJNR-958-MONOMER Uniprot:Q2GFP0
Length = 220
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 64/147 (43%), Positives = 96/147 (65%)
Query: 143 NKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYIAA 202
N++Y +S + + E+A A F ES+D++I+LN+N +SD+ VRG +VLP G++I +A
Sbjct: 7 NEVYDVESGLRKVIESAKANFCESVDVAINLNINSSKSDEQVRGCVVLPKGLGREIKVAV 66
Query: 203 FVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDL--VIASPESMHIVSSLGKILGPKG 260
F E A+ A ADIVG E+L +++K + D+ + +P+ M VSS+ KILGPKG
Sbjct: 67 FAKGGYLEMAREAMADIVGDEELIEEVKKKQCKLDVDWCLTTPDFMASVSSIAKILGPKG 126
Query: 261 LMPNIKDGTLNSDILTAIKNAKSGQIR 287
LMPN K T+ ++ AIK KSGQI+
Sbjct: 127 LMPNPKFNTVTFELAKAIKMIKSGQIK 153
>UNIPROTKB|P96932 [details] [associations]
symbol:rplA "50S ribosomal protein L1" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0005829
GO:GO:0005886 GO:GO:0005618 GO:GO:0006417 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
EMBL:BX842574 GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424
HAMAP:MF_01318_B PIR:F70613 RefSeq:NP_215155.1 RefSeq:NP_335081.1
RefSeq:YP_006513982.1 ProteinModelPortal:P96932 SMR:P96932
PRIDE:P96932 EnsemblBacteria:EBMYCT00000001871
EnsemblBacteria:EBMYCT00000072842 GeneID:13318527 GeneID:888043
GeneID:925953 KEGG:mtc:MT0669.1 KEGG:mtu:Rv0641 KEGG:mtv:RVBD_0641
PATRIC:18123195 TubercuList:Rv0641 Uniprot:P96932
Length = 235
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 57/146 (39%), Positives = 94/146 (64%)
Query: 141 DKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYI 200
D+ +Y+ A L KE ++ K D +++++I L V+ +++DQ+VRG++ LP TGK +
Sbjct: 16 DRTNLYTPLQAAKLAKETSSTKQDATVEVAIRLGVDPRKADQMVRGTVNLPHGTGKTARV 75
Query: 201 AAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGKILGPKG 260
A F EK + A AGAD+VG +DL ++I+ + D IA+P+ M V + ++LGP+G
Sbjct: 76 AVFAVGEKADAAVAAGADVVGSDDLIERIQGGWLEFDAAIATPDQMAKVGRIARVLGPRG 135
Query: 261 LMPNIKDGTLNSDILTAIKNAKSGQI 286
LMPN K GT+ +D+ A+ + K G+I
Sbjct: 136 LMPNPKTGTVTADVAKAVADIKGGKI 161
>POMBASE|SPAC1486.07c [details] [associations]
symbol:mrpl19 "mitochondrial ribosomal protein subunit
L19 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 PomBase:SPAC1486.07c
Pfam:PF03946 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 HSSP:P29395 OMA:CKDFNEK PIR:T50076
RefSeq:NP_594095.1 ProteinModelPortal:Q9UTK2 STRING:Q9UTK2
EnsemblFungi:SPAC1486.07c.1 GeneID:2541549 KEGG:spo:SPAC1486.07c
OrthoDB:EOG4Q8872 NextBio:20802646 Uniprot:Q9UTK2
Length = 144
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/140 (44%), Positives = 87/140 (62%)
Query: 1 MVKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIIT 60
M T IKL +PAGKA P+PPIGPALG RGL ++FCK FNA+T G TP+P IT
Sbjct: 1 MASTRTTIIKLIVPAGKATPTPPIGPALGARGLKSIDFCKEFNARTAGWMPNTPVPCKIT 60
Query: 61 VFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVD--LT 118
V ++FTF P ++LI K ++KGS+ P D G+L+ I EIA +K+ D L
Sbjct: 61 VTPQRTFTFTIHTPPTSWLISKTLDLEKGSSSPLHDIKGQLSLKHIYEIAKLKSTDPSLQ 120
Query: 119 AASISAAMRTIAGSARSMGI 138
+ + +++ G+A+SMG+
Sbjct: 121 GIELLSLCKSVIGTAKSMGV 140
>TIGR_CMR|APH_1027 [details] [associations]
symbol:APH_1027 "ribosomal protein L1" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 TIGRFAMs:TIGR01169 RefSeq:YP_505586.1
ProteinModelPortal:Q2GJ65 STRING:Q2GJ65 GeneID:3931039
KEGG:aph:APH_1027 PATRIC:20950804 KO:K02863 OMA:YVTSTMG
ProtClustDB:PRK05424 BioCyc:APHA212042:GHPM-1034-MONOMER
HAMAP:MF_01318_B Uniprot:Q2GJ65
Length = 216
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 63/150 (42%), Positives = 94/150 (62%)
Query: 139 IFDKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKI 198
+ DKN +Y+ + I + ++ TA+F ES+D++I L+ RS +RG VLP G+++
Sbjct: 1 MLDKNIVYTPEEGIDQLLKSTTARFKESVDVAIKLSTGDSRSGDSIRGVAVLPKGLGREV 60
Query: 199 YIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSN-EVSCDLVIASPESMHIVSSLGKILG 257
+A E +QAK AGAD+VG DL ++IK ++ D IA+P+ M VS++ KILG
Sbjct: 61 RVAVLAKGEYAKQAKDAGADVVGDSDLIEEIKKGRKLDFDWCIATPDFMSQVSAIAKILG 120
Query: 258 PKGLMPNIKDGTLNSDILTAIKNAKSGQIR 287
P+GLMPN K GT+ DI + KSGQ+R
Sbjct: 121 PRGLMPNPKFGTVTFDIAKMVGIVKSGQVR 150
>TAIR|locus:2117627 [details] [associations]
symbol:MRPL11 "mitochondrial ribosomal protein L11"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=ISS]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0006626 "protein targeting to
mitochondrion" evidence=RCA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 SMART:SM00649 Pfam:PF03946
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AL161587 EMBL:AL117188 eggNOG:COG0080
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 HSSP:P29395 OMA:CKDFNEK
EMBL:AY088804 EMBL:BT025614 EMBL:AK226300 IPI:IPI00519099
PIR:T41746 RefSeq:NP_195274.1 UniGene:At.43896
ProteinModelPortal:Q9SVW7 SMR:Q9SVW7 STRING:Q9SVW7 PaxDb:Q9SVW7
PRIDE:Q9SVW7 EnsemblPlants:AT4G35490.1 GeneID:829701
KEGG:ath:AT4G35490 TAIR:At4g35490 InParanoid:Q9SVW7
PhylomeDB:Q9SVW7 ProtClustDB:CLSN2686076 ArrayExpress:Q9SVW7
Genevestigator:Q9SVW7 Uniprot:Q9SVW7
Length = 155
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 62/138 (44%), Positives = 85/138 (61%)
Query: 3 KKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVF 62
+ + I+L +PAG A P+PP+GPALGQ LN+M FCK+FNA+TQ + TP+ V IT F
Sbjct: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70
Query: 63 SDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVD--LTAA 120
D SF F K V++ IKKAAG+ KGS +P V L+ + EIA +K D
Sbjct: 71 KDNSFEFTVKSPTVSWYIKKAAGVDKGSTRPGHLSVTTLSVRHVYEIAKVKQTDPFCQYM 130
Query: 121 SISAAMRTIAGSARSMGI 138
+ + ++I G+A SMGI
Sbjct: 131 PLESICKSIIGTANSMGI 148
>CGD|CAL0000474 [details] [associations]
symbol:MRPL19 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 CGD:CAL0000474 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000038
EMBL:AACQ01000037 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
RefSeq:XP_718736.1 RefSeq:XP_718820.1 ProteinModelPortal:Q5AAS9
STRING:Q5AAS9 GeneID:3639497 GeneID:3639577 KEGG:cal:CaO19.13611
KEGG:cal:CaO19.6231 Uniprot:Q5AAS9
Length = 143
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 59/132 (44%), Positives = 87/132 (65%)
Query: 9 IKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDKSFT 68
+KL + AGKA P+PP+GPALG +G+ ++FCK FNA+T G PIPVII V D++FT
Sbjct: 8 VKLVVEAGKAAPAPPVGPALGSKGVKAIDFCKEFNARTAIYNQGVPIPVIIQVKPDRTFT 67
Query: 69 FKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAASIS--AAM 126
F+ K P ++L+ KAAG++KGS K + VG+++ I EIA IK D S+ A +
Sbjct: 68 FEMKSPPTSWLLMKAAGVEKGSGKALKEPVGEVSLKHIWEIAKIKKTDDRHKSVDLKAIV 127
Query: 127 RTIAGSARSMGI 138
++ +A+ +GI
Sbjct: 128 GSVISTAKVVGI 139
>TIGR_CMR|ECH_0956 [details] [associations]
symbol:ECH_0956 "ribosomal protein L11" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080
HOGENOM:HOG000082123 KO:K02867 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 RefSeq:YP_507744.1 ProteinModelPortal:Q2GFN9
STRING:Q2GFN9 GeneID:3927764 KEGG:ech:ECH_0956 PATRIC:20577294
OMA:KLEFMAM BioCyc:ECHA205920:GJNR-959-MONOMER Uniprot:Q2GFN9
Length = 147
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 58/135 (42%), Positives = 83/135 (61%)
Query: 9 IKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQG----IELGTPIPVIITVFSD 64
I L I AGKANP P I LG RG+ + +FCK FN T G ++G + I++++D
Sbjct: 9 INLMIEAGKANPGPKIASVLGPRGIPMPKFCKEFNDITSGEGKQYKVGDLVTARISIYND 68
Query: 65 KSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAASISA 124
KS++F +PV++L+KKAA I KGS P D VGK+ + EIA K D+ A ++ A
Sbjct: 69 KSYSFTISDSPVSYLLKKAAAIDKGSVNPGKDNVGKIKMSAVYEIAKRKMSDMNADTVEA 128
Query: 125 AMRTIAGSARSMGII 139
A + + G+A SMGI+
Sbjct: 129 AAKMVIGTASSMGIV 143
>UNIPROTKB|Q9Y3B7 [details] [associations]
symbol:MRPL11 "39S ribosomal protein L11, mitochondrial"
species:9606 "Homo sapiens" [GO:0005761 "mitochondrial ribosome"
evidence=NAS] [GO:0006412 "translation" evidence=NAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 EMBL:AB049638 Pfam:PF03946 GO:GO:0006412
EMBL:CH471076 GO:GO:0005840 GO:GO:0003735 EMBL:AP002748
GO:GO:0005761 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 HOVERGEN:HBG036110 OMA:CKDFNEK
OrthoDB:EOG46Q6TQ EMBL:AF151871 EMBL:AK290084 EMBL:BC005002
EMBL:BC108277 EMBL:BM554886 EMBL:AB051338 IPI:IPI00007001
IPI:IPI00333848 IPI:IPI00377233 RefSeq:NP_057134.1
RefSeq:NP_733934.1 RefSeq:NP_733935.1 UniGene:Hs.418450
ProteinModelPortal:Q9Y3B7 SMR:Q9Y3B7 IntAct:Q9Y3B7 STRING:Q9Y3B7
PhosphoSite:Q9Y3B7 DMDM:22001931 PaxDb:Q9Y3B7 PRIDE:Q9Y3B7
DNASU:65003 Ensembl:ENST00000310999 Ensembl:ENST00000329819
Ensembl:ENST00000430466 GeneID:65003 KEGG:hsa:65003 UCSC:uc001ohz.4
UCSC:uc001oia.4 GeneCards:GC11M066202 HGNC:HGNC:14042 MIM:611826
neXtProt:NX_Q9Y3B7 PharmGKB:PA30940 InParanoid:Q9Y3B7
PhylomeDB:Q9Y3B7 ChiTaRS:MRPL11 GenomeRNAi:65003 NextBio:67180
ArrayExpress:Q9Y3B7 Bgee:Q9Y3B7 CleanEx:HS_MRPL11
Genevestigator:Q9Y3B7 GermOnline:ENSG00000174547 Uniprot:Q9Y3B7
Length = 192
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 58/139 (41%), Positives = 86/139 (61%)
Query: 4 KITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFS 63
++ G I+ + AG A P PP+GP LGQRG++I +FCK FN +T+ I+ G P+P I V
Sbjct: 15 EVGGVIRAIVRAGLAMPGPPLGPVLGQRGVSINQFCKEFNERTKDIKEGIPLPTKILVKP 74
Query: 64 DKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVD----LTA 119
D++F K V++ +K AAGI+KG+ + + G +T + EIA IK D L
Sbjct: 75 DRTFEIKIGQPTVSYFLKAAAGIEKGARQTGKEVAGLVTLKHVYEIARIKAQDEAFALQD 134
Query: 120 ASISAAMRTIAGSARSMGI 138
+S+ +R+I GSARS+GI
Sbjct: 135 VPLSSVVRSIIGSARSLGI 153
>UNIPROTKB|F1RU54 [details] [associations]
symbol:MRPL11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 GeneTree:ENSGT00390000003153
OMA:CKDFNEK EMBL:CU928034 RefSeq:XP_003122536.1
Ensembl:ENSSSCT00000014148 GeneID:100518767 KEGG:ssc:100518767
Uniprot:F1RU54
Length = 192
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 57/137 (41%), Positives = 85/137 (62%)
Query: 6 TGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDK 65
+G I+ + AG+A P PP+GP LGQRG++I +FCK FN +T+ I+ G P+P I V D+
Sbjct: 17 SGMIRAIVRAGQARPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFVKPDR 76
Query: 66 SFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVD----LTAAS 121
+F K V++ +K AAGI+KG+ + G +T + EIA +K D L
Sbjct: 77 TFEIKIGQPTVSYFLKAAAGIEKGARHTGKEVAGLVTLKHVYEIARVKAQDDAFALQDVP 136
Query: 122 ISAAMRTIAGSARSMGI 138
+S+ +R+I GSARS+GI
Sbjct: 137 LSSVVRSIIGSARSLGI 153
>UNIPROTKB|Q2YDI0 [details] [associations]
symbol:MRPL11 "39S ribosomal protein L11, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 PDB:2FTC PDBsum:2FTC EMBL:BT021538 EMBL:BC110214
IPI:IPI00696336 RefSeq:NP_001014932.1 UniGene:Bt.1415
ProteinModelPortal:Q2YDI0 STRING:Q2YDI0 Ensembl:ENSBTAT00000019979
GeneID:515990 KEGG:bta:515990 CTD:65003
GeneTree:ENSGT00390000003153 HOVERGEN:HBG036110 InParanoid:Q2YDI0
OMA:CKDFNEK OrthoDB:EOG46Q6TQ EvolutionaryTrace:Q2YDI0
NextBio:20872082 Uniprot:Q2YDI0
Length = 192
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 57/136 (41%), Positives = 84/136 (61%)
Query: 7 GFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDKS 66
G I+ + AG+A P PP+GP LGQRG++I +FCK FN +T+ I+ G P+P I V D++
Sbjct: 18 GVIRTILRAGQAMPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFVKPDRT 77
Query: 67 FTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVD----LTAASI 122
F K V++ +K AAGI+KG+ + G +T + EIA +K D L +
Sbjct: 78 FEIKIGQPTVSYFLKAAAGIEKGARNTGKEVAGLVTLKHVYEIARVKAQDDAFALQDVPL 137
Query: 123 SAAMRTIAGSARSMGI 138
S+ +R+I GSARS+GI
Sbjct: 138 SSVVRSIIGSARSLGI 153
>ASPGD|ASPL0000056238 [details] [associations]
symbol:AN0116 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 Pfam:PF00298 SMART:SM00649
Pfam:PF03946 EMBL:BN001308 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AACD01000004 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 OMA:CKDFNEK OrthoDB:EOG4Q8872 RefSeq:XP_657720.1
ProteinModelPortal:Q5BH64 STRING:Q5BH64
EnsemblFungi:CADANIAT00002631 GeneID:2875895 KEGG:ani:AN0116.2
Uniprot:Q5BH64
Length = 153
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 53/138 (38%), Positives = 86/138 (62%)
Query: 9 IKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDKSFT 68
+KL + AG+A+PSPP+GPALG +G+ M+FCK FNA+T I G PIP +TV D+SF
Sbjct: 12 VKLIVGAGQASPSPPVGPALGSKGVKSMDFCKEFNARTAHITTGVPIPARVTVRPDRSFH 71
Query: 69 FKKKVTPVTFLIKKAAGIQ------KGSAKPHSDKVGKLTYLQIKEIATIKNVD--LTAA 120
F + T+L+ +AA ++ +G+ +P + +GK++ + EIA IK + L+
Sbjct: 72 FDLRTPTTTYLLLQAAKVEPRKNRIRGAQRPGHEFIGKISLKHVYEIAKIKQSETRLSGL 131
Query: 121 SISAAMRTIAGSARSMGI 138
S+ +++ A+S+GI
Sbjct: 132 SLEGLCKSVMAQAKSVGI 149
>TAIR|locus:2041519 [details] [associations]
symbol:AT2G42710 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015934 "large
ribosomal subunit" evidence=IEA;ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
HSSP:P27150 EMBL:AY091124 EMBL:AY113995 EMBL:AK118309
IPI:IPI00522914 RefSeq:NP_850375.1 UniGene:At.36979
ProteinModelPortal:Q8RWT4 SMR:Q8RWT4 STRING:Q8RWT4 PaxDb:Q8RWT4
PRIDE:Q8RWT4 EnsemblPlants:AT2G42710.1 GeneID:818871
KEGG:ath:AT2G42710 TAIR:At2g42710 InParanoid:Q8RWT4 OMA:KYAGYVN
PhylomeDB:Q8RWT4 ProtClustDB:CLSN2680207 Genevestigator:Q8RWT4
Uniprot:Q8RWT4
Length = 415
Score = 263 (97.6 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 58/147 (39%), Positives = 87/147 (59%)
Query: 142 KNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYIA 201
K I+ AI IK A AKFDE+++ + L + RS+ IVRG++ LP S K + +A
Sbjct: 184 KKPIFDLMEAIREIKGNAKAKFDETLEAHVRLGIEKGRSELIVRGTLALPHSVKKDVKVA 243
Query: 202 AFVPKEKYEQAKIAGADIVGMEDLAQKI-KSNEVSCDLVIASPESMHIVSSLGKILGPKG 260
F E AK AGAD+VG +L ++I KS ++ D +A+P+ M V + +IL G
Sbjct: 244 FFAEGADAEDAKAAGADVVGGLELIEEILKSGKIDFDRCLATPKMMPRVYKISRILNNHG 303
Query: 261 LMPNIKDGTLNSDILTAIKNAKSGQIR 287
LMPN K G++ D+ A+K+AK+G +
Sbjct: 304 LMPNPKQGSVTKDVTKAVKDAKAGHTK 330
>RGD|1359665 [details] [associations]
symbol:mrpl11 "mitochondrial ribosomal protein L11"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 SMART:SM00649 RGD:1359665
Pfam:PF03946 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 GeneTree:ENSGT00390000003153
HOVERGEN:HBG036110 EMBL:BC083740 IPI:IPI00198125
RefSeq:NP_001006974.1 UniGene:Rn.3762 ProteinModelPortal:Q5XIE3
STRING:Q5XIE3 Ensembl:ENSRNOT00000027091 GeneID:293666
KEGG:rno:293666 UCSC:RGD:1359665 InParanoid:Q5XIE3 NextBio:636676
ArrayExpress:Q5XIE3 Genevestigator:Q5XIE3
GermOnline:ENSRNOG00000019970 Uniprot:Q5XIE3
Length = 203
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 60/157 (38%), Positives = 92/157 (58%)
Query: 7 GFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDKS 66
G I+ + AG+A P PP+GP LGQRG++I +FCK FN +T+ I+ G P+P I + D++
Sbjct: 18 GVIRSIVRAGQAIPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRT 77
Query: 67 FTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAAS----I 122
F K +++ +K AAGI+KG+ + + G ++ + EIA +K D A +
Sbjct: 78 FELKIGQPTISYFLKAAAGIEKGARQTGKEVAGLVSLKHVYEIARVKAKDEAFAMQDVPL 137
Query: 123 SAAMRTIAGSARSMGIIFDKNKIYSFDSAITLIKEAA 159
S+ +R+I GSARS+GI K+ S D KE A
Sbjct: 138 SSIVRSIIGSARSLGIRVVKD--LSVDELAAFQKERA 172
>UNIPROTKB|Q5XIE3 [details] [associations]
symbol:Mrpl11 "39S ribosomal protein L11, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 RGD:1359665 Pfam:PF03946 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0080
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 CTD:65003
GeneTree:ENSGT00390000003153 HOVERGEN:HBG036110 EMBL:BC083740
IPI:IPI00198125 RefSeq:NP_001006974.1 UniGene:Rn.3762
ProteinModelPortal:Q5XIE3 STRING:Q5XIE3 Ensembl:ENSRNOT00000027091
GeneID:293666 KEGG:rno:293666 UCSC:RGD:1359665 InParanoid:Q5XIE3
NextBio:636676 ArrayExpress:Q5XIE3 Genevestigator:Q5XIE3
GermOnline:ENSRNOG00000019970 Uniprot:Q5XIE3
Length = 203
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 60/157 (38%), Positives = 92/157 (58%)
Query: 7 GFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDKS 66
G I+ + AG+A P PP+GP LGQRG++I +FCK FN +T+ I+ G P+P I + D++
Sbjct: 18 GVIRSIVRAGQAIPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRT 77
Query: 67 FTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAAS----I 122
F K +++ +K AAGI+KG+ + + G ++ + EIA +K D A +
Sbjct: 78 FELKIGQPTISYFLKAAAGIEKGARQTGKEVAGLVSLKHVYEIARVKAKDEAFAMQDVPL 137
Query: 123 SAAMRTIAGSARSMGIIFDKNKIYSFDSAITLIKEAA 159
S+ +R+I GSARS+GI K+ S D KE A
Sbjct: 138 SSIVRSIIGSARSLGIRVVKD--LSVDELAAFQKERA 172
>UNIPROTKB|E2RBT1 [details] [associations]
symbol:MRPL11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 SMART:SM00649 Pfam:PF03946
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 GeneTree:ENSGT00390000003153
OMA:CKDFNEK EMBL:AAEX03011628 RefSeq:XP_533221.1
ProteinModelPortal:E2RBT1 Ensembl:ENSCAFT00000020140 GeneID:476012
KEGG:cfa:476012 NextBio:20851744 Uniprot:E2RBT1
Length = 192
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 56/136 (41%), Positives = 84/136 (61%)
Query: 7 GFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDKS 66
G I+ + AG+A PP+GP LGQRG++I +FCK FN +T+ I+ G P+P I V D++
Sbjct: 18 GVIRTIVRAGQAMTGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFVKPDRT 77
Query: 67 FTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVD----LTAASI 122
F K V++ +K AAGI+KG+ + + G +T + EIA +K D L +
Sbjct: 78 FEIKIGQPTVSYFLKAAAGIEKGARQTGKEVAGLVTLKHVYEIAQVKAQDEAFALQDVPL 137
Query: 123 SAAMRTIAGSARSMGI 138
S+ +R+I GSARS+GI
Sbjct: 138 SSVVRSIIGSARSLGI 153
>ZFIN|ZDB-GENE-040718-294 [details] [associations]
symbol:mrpl11 "mitochondrial ribosomal protein L11"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
ZFIN:ZDB-GENE-040718-294 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0080 HOGENOM:HOG000082123 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632 CTD:65003
HOVERGEN:HBG036110 OrthoDB:EOG46Q6TQ EMBL:BC076246 IPI:IPI00484175
RefSeq:NP_001002556.1 UniGene:Dr.27215 ProteinModelPortal:Q6DGU3
STRING:Q6DGU3 GeneID:436829 KEGG:dre:436829 InParanoid:Q6DGU3
NextBio:20831261 Uniprot:Q6DGU3
Length = 196
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 53/136 (38%), Positives = 86/136 (63%)
Query: 7 GFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDKS 66
G I+ + +G+A P PP+GP LGQ+G+ I FCK+FN +T+ ++ G P+PV I V D++
Sbjct: 18 GLIRAIVRSGQAAPGPPLGPILGQKGIPIGAFCKDFNERTKDLKEGIPLPVKINVKPDRT 77
Query: 67 FTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVD----LTAASI 122
+ K V++ +K+AAGI+KG+ K + G +T + EIA +K+ D L ++
Sbjct: 78 YDLKIGQPTVSYFLKQAAGIEKGAGKTGHEIAGMVTVRAVYEIARVKSQDECFKLRDTTM 137
Query: 123 SAAMRTIAGSARSMGI 138
+++I GSARS+GI
Sbjct: 138 QNVVKSIIGSARSLGI 153
>TIGR_CMR|DET_0992 [details] [associations]
symbol:DET_0992 "ribosomal protein L1" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_181715.1
ProteinModelPortal:Q3Z7T4 STRING:Q3Z7T4 GeneID:3229744
KEGG:det:DET0992 PATRIC:21609033 BioCyc:DETH243164:GJNF-993-MONOMER
Uniprot:Q3Z7T4
Length = 237
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 52/150 (34%), Positives = 91/150 (60%)
Query: 139 IFDKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKI 198
+ D++ Y+ AI + K+ A AKFDE++++ + + ++ K + Q +RG VLP GK +
Sbjct: 14 LLDQSLAYAPAEAIDVAKKMAAAKFDETVEMHLKMGLDPKNATQQLRGVAVLPHGLGKTV 73
Query: 199 YIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGKILGP 258
+ F E + A+ AGAD+ G ++L +K+++ + D+ I++P+ M V LGK+LG
Sbjct: 74 RVLVFAQGEAEKAAQAAGADVYGGDELIKKVEAGFLDFDVAISTPDMMSKVGKLGKVLGR 133
Query: 259 KGLMPNIKDGTL--NSDILTAIKNAKSGQI 286
+GLMPN K GT+ D I+ A+ G++
Sbjct: 134 RGLMPNPKSGTVVPAEDFKQVIEEARKGRV 163
>MGI|MGI:2137215 [details] [associations]
symbol:Mrpl11 "mitochondrial ribosomal protein L11"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 MGI:MGI:2137215
Pfam:PF03946 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 GeneTree:ENSGT00390000003153
HOVERGEN:HBG036110 OMA:CKDFNEK OrthoDB:EOG46Q6TQ EMBL:AB049639
EMBL:AK002797 EMBL:AK010329 EMBL:AK167247 EMBL:BC046750
IPI:IPI00132470 RefSeq:NP_079829.1 UniGene:Mm.28494
ProteinModelPortal:Q9CQF0 SMR:Q9CQF0 STRING:Q9CQF0
PhosphoSite:Q9CQF0 PaxDb:Q9CQF0 PRIDE:Q9CQF0
Ensembl:ENSMUST00000025836 GeneID:66419 KEGG:mmu:66419
UCSC:uc008gbt.2 InParanoid:Q9CQF0 NextBio:321635 Bgee:Q9CQF0
CleanEx:MM_MRPL11 Genevestigator:Q9CQF0
GermOnline:ENSMUSG00000024902 Uniprot:Q9CQF0
Length = 192
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 54/136 (39%), Positives = 84/136 (61%)
Query: 7 GFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDKS 66
G I+ + AG+A P PP+GP LGQRG++I +FCK FN +T+ I+ G P+P I + D++
Sbjct: 18 GVIRSIVRAGQAIPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRT 77
Query: 67 FTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVD----LTAASI 122
F K V++ +K AAGI+KG+ + G ++ + EIA +K D + +
Sbjct: 78 FELKIGQPTVSYFLKAAAGIEKGARHTGKEVAGLVSLKHVYEIACVKAKDDAFAMQDVPL 137
Query: 123 SAAMRTIAGSARSMGI 138
S+ +R+I GSARS+GI
Sbjct: 138 SSVVRSIIGSARSLGI 153
>FB|FBgn0038234 [details] [associations]
symbol:mRpL11 "mitochondrial ribosomal protein L11"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298
PROSITE:PS00359 SMART:SM00649 Pfam:PF03946 EMBL:AE014297
GO:GO:0006417 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
GO:GO:0031047 eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 CTD:65003 GeneTree:ENSGT00390000003153 OMA:CKDFNEK
EMBL:AY094892 RefSeq:NP_524351.1 UniGene:Dm.14087
ProteinModelPortal:Q9VFJ2 SMR:Q9VFJ2 DIP:DIP-23522N IntAct:Q9VFJ2
MINT:MINT-1624235 STRING:Q9VFJ2 PaxDb:Q9VFJ2 PRIDE:Q9VFJ2
EnsemblMetazoa:FBtr0082953 GeneID:41757 KEGG:dme:Dmel_CG3351
FlyBase:FBgn0038234 InParanoid:Q9VFJ2 OrthoDB:EOG4XD27D
PhylomeDB:Q9VFJ2 GenomeRNAi:41757 NextBio:825423 Bgee:Q9VFJ2
GermOnline:CG3351 Uniprot:Q9VFJ2
Length = 196
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 59/138 (42%), Positives = 81/138 (58%)
Query: 6 TGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDK 65
T +K IPAG A PP+GP LGQR +NI FCK+FNA+T ++ G P+P I+V SD+
Sbjct: 21 TSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNSDR 80
Query: 66 SFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIK-----NVDLTAA 120
S+ P TF +K+AAGIQ+G+ P + G +T + EIA IK NV LT
Sbjct: 81 SYDLAIHHPPATFFLKQAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNVLLTMQ 140
Query: 121 SISAAMRTIAGSARSMGI 138
+ + +IA R+ GI
Sbjct: 141 QMCEMLISIA---RTCGI 155
>SGD|S000005129 [details] [associations]
symbol:MRPL19 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IDA]
[GO:0032543 "mitochondrial translation" evidence=IC] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
SGD:S000005129 Pfam:PF03946 EMBL:BK006947 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 GeneTree:ENSGT00390000003153 OMA:CKDFNEK
OrthoDB:EOG4Q8872 EMBL:Z71461 PIR:S63140 RefSeq:NP_014214.1
ProteinModelPortal:P53875 SMR:P53875 DIP:DIP-6781N IntAct:P53875
MINT:MINT-613200 STRING:P53875 PaxDb:P53875 EnsemblFungi:YNL185C
GeneID:855536 KEGG:sce:YNL185C CYGD:YNL185c NextBio:979595
Genevestigator:P53875 GermOnline:YNL185C Uniprot:P53875
Length = 158
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 54/145 (37%), Positives = 87/145 (60%)
Query: 9 IKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDKSFT 68
+KL + AG+A PSPP+GPALG +G+ ++FCK FNA++ + G P+PV+IT+ D++FT
Sbjct: 10 VKLIVGAGQAAPSPPVGPALGSKGIKAIDFCKEFNARSANYQPGVPVPVLITIKPDRTFT 69
Query: 69 FKKKVTPVTFLIKKAAGIQKGSAKPH-------------SDKVGKLTYLQIKEIATIKNV 115
F+ K P +L+ KA + KG +P+ + +G+L+ + EIA IK
Sbjct: 70 FEMKSPPTGYLLLKALKMDKGHGQPNVGTMLGSAPAKGPTRALGELSLKHVYEIAKIKKS 129
Query: 116 DL--TAASISAAMRTIAGSARSMGI 138
D + + +++I G A+SMGI
Sbjct: 130 DERHSLLEMEGIVKSIVGVAKSMGI 154
>TIGR_CMR|APH_1028 [details] [associations]
symbol:APH_1028 "ribosomal protein L11" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 OMA:FCKQYNF RefSeq:YP_505587.1
ProteinModelPortal:Q2GJ64 STRING:Q2GJ64 GeneID:3929928
KEGG:aph:APH_1028 PATRIC:20950806
BioCyc:APHA212042:GHPM-1035-MONOMER Uniprot:Q2GJ64
Length = 148
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 53/134 (39%), Positives = 82/134 (61%)
Query: 9 IKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQT--QGI--ELGTPIPVIITVFSD 64
I L + AGKA P P + LG RG+ + +FC+ FN T QG E+G + I+V+ D
Sbjct: 10 INLVMEAGKAAPGPKVASVLGPRGIPMPQFCREFNEATSAQGTPYEIGDLVTARISVYVD 69
Query: 65 KSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAASISA 124
K+++F +PV+FL++KAAG+ KGS+ P + + ++ +IA K D+ A I A
Sbjct: 70 KTYSFTISDSPVSFLLRKAAGLTKGSSAPGKESCASIKMEEVVKIAERKIADMNADDIEA 129
Query: 125 AMRTIAGSARSMGI 138
A++ + G+ARSMGI
Sbjct: 130 AVKMVIGTARSMGI 143
>WB|WBGene00015133 [details] [associations]
symbol:mrpl-11 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0005739 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0080
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000003153 OMA:CKDFNEK
EMBL:FO080163 PIR:S27795 RefSeq:NP_498923.1
ProteinModelPortal:P34264 SMR:P34264 DIP:DIP-24352N
MINT:MINT-1047973 STRING:P34264 PaxDb:P34264
EnsemblMetazoa:B0303.15 GeneID:181917 KEGG:cel:CELE_B0303.15
UCSC:B0303.15 CTD:181917 WormBase:B0303.15 InParanoid:P34264
NextBio:915782 Uniprot:P34264
Length = 195
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 55/141 (39%), Positives = 82/141 (58%)
Query: 1 MVKKITG-FIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVII 59
+VK + G ++ I A A+ +PP+GP LGQRGLN+ FCK FN +T + G P+P I
Sbjct: 14 IVKVVHGALLRTNIKAQMASAAPPLGPQLGQRGLNVANFCKEFNKETGHFKQGVPLPTRI 73
Query: 60 TVFSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVD--L 117
TV D+++ + T+L+K+AAGI +G A + VGKLT + EIA IK+ D L
Sbjct: 74 TVKPDRTYDLEICTPTTTWLLKQAAGIGRGKASK-DEIVGKLTVKHLYEIAKIKSRDKAL 132
Query: 118 TAASISAAMRTIAGSARSMGI 138
+ R + + R++GI
Sbjct: 133 QHVPLEQICRMLIKTCRTLGI 153
>TAIR|locus:2153162 [details] [associations]
symbol:AT5G51610 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0006354
"DNA-dependent transcription, elongation" evidence=RCA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AB018109 eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867
Gene3D:1.10.10.250 PANTHER:PTHR11661 SUPFAM:SSF46906
IPI:IPI00529938 RefSeq:NP_199974.1 UniGene:At.55491 HSSP:P56210
ProteinModelPortal:Q9FHM3 SMR:Q9FHM3 STRING:Q9FHM3 PaxDb:Q9FHM3
PRIDE:Q9FHM3 EnsemblPlants:AT5G51610.1 GeneID:835235
KEGG:ath:AT5G51610 TAIR:At5g51610 InParanoid:Q9FHM3 OMA:NCTTIVS
PhylomeDB:Q9FHM3 Genevestigator:Q9FHM3 Uniprot:Q9FHM3
Length = 182
Score = 182 (69.1 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 64 DKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAASIS 123
D+SFTF K P +FL+ KAAG++KGS P KVG +T Q+++IA +K +L +I
Sbjct: 92 DQSFTFILKTPPTSFLLLKAAGVKKGSKDPKQIKVGMITIDQVRKIAEVKLPELNCTTIV 151
Query: 124 AAMRTIAGSARSMGIIFD 141
+ MRTIAG+A +MGI D
Sbjct: 152 STMRTIAGTAGNMGIDID 169
Score = 59 (25.8 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 3 KKITGFIKLQIPAGKANPSPP 23
KK+ G +K+ + AGKA +PP
Sbjct: 71 KKVVGIVKMNVWAGKATLAPP 91
>TIGR_CMR|NSE_0682 [details] [associations]
symbol:NSE_0682 "ribosomal protein L11" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0000315 "organellar
large ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 ProtClustDB:PRK00140
RefSeq:YP_506560.1 ProteinModelPortal:Q2GD86 STRING:Q2GD86
GeneID:3931369 KEGG:nse:NSE_0682 PATRIC:22681383 OMA:FCKQYNF
BioCyc:NSEN222891:GHFU-696-MONOMER Uniprot:Q2GD86
Length = 140
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 50/137 (36%), Positives = 74/137 (54%)
Query: 2 VKKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITV 61
+KK+ +KL++PAGKA+P+P I +LG +G+N+M+FC+ N T G G I V + V
Sbjct: 1 MKKVVARLKLRVPAGKASPTPAIASSLGPKGVNLMKFCQACNELT-GALAGN-IRVRVLV 58
Query: 62 FSDKSFTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVDLTAAS 121
+ DK+F + T +IK KGSA P V + +I EIA + +
Sbjct: 59 YQDKTFDVVVRGKNSTDVIKSFLQFSKGSAAPGKSFVASVGQSKISEIARELIGCMNTRN 118
Query: 122 ISAAMRTIAGSARSMGI 138
AA+R + G SMGI
Sbjct: 119 FDAAVRMVTGKVASMGI 135
>GENEDB_PFALCIPARUM|PF11_0113 [details] [associations]
symbol:PF11_0113 "ribosomal protein L11,
putative" species:5833 "Plasmodium falciparum" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 RefSeq:XP_001347786.2 ProteinModelPortal:Q8IIQ5
EnsemblProtists:PF11_0113:mRNA GeneID:810662 KEGG:pfa:PF11_0113
EuPathDB:PlasmoDB:PF3D7_1110600 ProtClustDB:CLSZ2433013
GO:GO:0000315 Uniprot:Q8IIQ5
Length = 178
Score = 180 (68.4 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 43/134 (32%), Positives = 69/134 (51%)
Query: 7 GFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDKS 66
G L + +G A PS IG LG G+N+M F K FN +T+ I PI V + +D++
Sbjct: 5 GRFNLIVLSGTAKPSASIGQTLGPLGINMMTFFKEFNDRTKCIAKNVPIQVTLEPLNDRT 64
Query: 67 FTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVD--LTAASISA 124
+ F + V + I++ A + S+ + VG +T ++ IA K +D L S+ +
Sbjct: 65 YRFYLRTPTVVWFIRRCARVPMFSSMAKHNTVGSITLAEVFHIAKCKRMDPPLINLSLKS 124
Query: 125 AMRTIAGSARSMGI 138
+ I G+ SMGI
Sbjct: 125 ICKYIIGTCNSMGI 138
>UNIPROTKB|Q8IIQ5 [details] [associations]
symbol:PF11_0113 "Mitochondrial ribosomal protein L11,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 RefSeq:XP_001347786.2 ProteinModelPortal:Q8IIQ5
EnsemblProtists:PF11_0113:mRNA GeneID:810662 KEGG:pfa:PF11_0113
EuPathDB:PlasmoDB:PF3D7_1110600 ProtClustDB:CLSZ2433013
GO:GO:0000315 Uniprot:Q8IIQ5
Length = 178
Score = 180 (68.4 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 43/134 (32%), Positives = 69/134 (51%)
Query: 7 GFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITVFSDKS 66
G L + +G A PS IG LG G+N+M F K FN +T+ I PI V + +D++
Sbjct: 5 GRFNLIVLSGTAKPSASIGQTLGPLGINMMTFFKEFNDRTKCIAKNVPIQVTLEPLNDRT 64
Query: 67 FTFKKKVTPVTFLIKKAAGIQKGSAKPHSDKVGKLTYLQIKEIATIKNVD--LTAASISA 124
+ F + V + I++ A + S+ + VG +T ++ IA K +D L S+ +
Sbjct: 65 YRFYLRTPTVVWFIRRCARVPMFSSMAKHNTVGSITLAEVFHIAKCKRMDPPLINLSLKS 124
Query: 125 AMRTIAGSARSMGI 138
+ I G+ SMGI
Sbjct: 125 ICKYIIGTCNSMGI 138
>GENEDB_PFALCIPARUM|PFL0500w [details] [associations]
symbol:PFL0500w "50S ribosomal protein L1,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AE014188 SUPFAM:SSF56808
GO:GO:0020011 GO:GO:0022625 Gene3D:3.30.190.20 Gene3D:3.40.50.790
RefSeq:XP_001350509.1 ProteinModelPortal:Q8I5U9
EnsemblProtists:PFL0500w:mRNA GeneID:811153 KEGG:pfa:PFL0500w
EuPathDB:PlasmoDB:PF3D7_1210000 HOGENOM:HOG000281192
ProtClustDB:CLSZ2433515 Uniprot:Q8I5U9
Length = 339
Score = 176 (67.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 54/153 (35%), Positives = 80/153 (52%)
Query: 136 MGIIFDKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQI----VRGSIVLP 191
+ I+ K Y+ AI IK A KF ESIDI +L+ N K+S ++ I P
Sbjct: 109 LDILPKKTNEYTLMEAIEKIKTLAIHKFVESIDI--YLSFNPKKSKMTKNDNIKTFITFP 166
Query: 192 FSTGKK----IYIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSC-----DLVIAS 242
+ KK +Y+ +K A +GAD+VG +DL KIK E+ + +I +
Sbjct: 167 HNLKKKREKKVYVVTNAKLQKI--ASQSGADVVGEDDLINKIKEREIRLQKRNNNFLICT 224
Query: 243 PESMHIVSSLGKILGPKGLMPNIKDGTLNSDIL 275
+ +H ++ +GK +G KGLMPN K GTL S+ L
Sbjct: 225 NDCIHKLTRVGKEIGRKGLMPNEKCGTLVSEFL 257
>UNIPROTKB|Q8I5U9 [details] [associations]
symbol:PFL0500w "Mitochondrial ribosomal protein L12,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0020011
"apicoplast" evidence=ISS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AE014188 SUPFAM:SSF56808
GO:GO:0020011 GO:GO:0022625 Gene3D:3.30.190.20 Gene3D:3.40.50.790
RefSeq:XP_001350509.1 ProteinModelPortal:Q8I5U9
EnsemblProtists:PFL0500w:mRNA GeneID:811153 KEGG:pfa:PFL0500w
EuPathDB:PlasmoDB:PF3D7_1210000 HOGENOM:HOG000281192
ProtClustDB:CLSZ2433515 Uniprot:Q8I5U9
Length = 339
Score = 176 (67.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 54/153 (35%), Positives = 80/153 (52%)
Query: 136 MGIIFDKNKIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQI----VRGSIVLP 191
+ I+ K Y+ AI IK A KF ESIDI +L+ N K+S ++ I P
Sbjct: 109 LDILPKKTNEYTLMEAIEKIKTLAIHKFVESIDI--YLSFNPKKSKMTKNDNIKTFITFP 166
Query: 192 FSTGKK----IYIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSC-----DLVIAS 242
+ KK +Y+ +K A +GAD+VG +DL KIK E+ + +I +
Sbjct: 167 HNLKKKREKKVYVVTNAKLQKI--ASQSGADVVGEDDLINKIKEREIRLQKRNNNFLICT 224
Query: 243 PESMHIVSSLGKILGPKGLMPNIKDGTLNSDIL 275
+ +H ++ +GK +G KGLMPN K GTL S+ L
Sbjct: 225 NDCIHKLTRVGKEIGRKGLMPNEKCGTLVSEFL 257
>ASPGD|ASPL0000012808 [details] [associations]
symbol:AN8225 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 GO:GO:0006412 GO:GO:0003723
EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000144 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 OMA:YLRAFEV OrthoDB:EOG49631S RefSeq:XP_681494.1
ProteinModelPortal:Q5AU05 STRING:Q5AU05
EnsemblFungi:CADANIAT00004275 GeneID:2868991 KEGG:ani:AN8225.2
HOGENOM:HOG000159984 Uniprot:Q5AU05
Length = 310
Score = 174 (66.3 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 40/135 (29%), Positives = 73/135 (54%)
Query: 156 KEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYIAAFVPK-EKY-EQAK 213
+E A +K++ +H+ + +R ++R I P S + I P K+ + A
Sbjct: 101 REPAVSKYE------VHIRLKTRRDGPVIRNMIRFPHSVQTESRICVICPPGSKHAKDAL 154
Query: 214 IAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSS--LGKILGPKGLMPNIKDGTLN 271
AGA +VG +++ + +KS + D +A P+SM ++ LG+ILGP+GLMP+ K GT+
Sbjct: 155 AAGAVLVGEDEVFEVVKSGRIEFDRCLAHPDSMPALAKAGLGRILGPRGLMPSAKTGTVV 214
Query: 272 SDILTAIKNAKSGQI 286
D+ ++ + G +
Sbjct: 215 EDVAARVEMLRGGTV 229
>UNIPROTKB|E9PQB6 [details] [associations]
symbol:MRPL11 "39S ribosomal protein L11, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AP002748 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF54747 HGNC:HGNC:14042 ChiTaRS:MRPL11
IPI:IPI00983181 ProteinModelPortal:E9PQB6 SMR:E9PQB6
Ensembl:ENST00000534488 ArrayExpress:E9PQB6 Bgee:E9PQB6
Uniprot:E9PQB6
Length = 75
Score = 152 (58.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 4 KITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGIELGTPIPVIITV 61
++ G I+ + AG A P PP+GP LGQRG++I +FCK FN +T+ I+ G P+P I V
Sbjct: 15 EVGGVIRAIVRAGLAMPGPPLGPVLGQRGVSINQFCKEFNERTKDIKEGIPLPTKILV 72
>DICTYBASE|DDB_G0294040 [details] [associations]
symbol:mrpl11 "ribosomal protein L11, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000911 PROSITE:PS00359 SMART:SM00649
dictyBase:DDB_G0294040 Pfam:PF03946 GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AB000109 GenomeReviews:AB000109_GR
EMBL:D21196 eggNOG:COG0080 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF54747 HSSP:P29395 PIR:JC4192 PIR:T43765
RefSeq:NP_050087.1 ProteinModelPortal:Q23884 STRING:Q23884
GeneID:2193916 KEGG:ddi:DidioMp20 Uniprot:Q23884
Length = 172
Score = 141 (54.7 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 33/91 (36%), Positives = 57/91 (62%)
Query: 3 KKITGFIKLQIPAGKANPSPPIGPALGQRGLNIMEFCKNFNAQTQGI-ELGTPIPVIITV 61
K I +KL I AG A+ +PP+GP LGQ G+N +EF +FN +T+ + E G + VI+ +
Sbjct: 18 KPILVRLKLIIGAGTASMTPPLGPNLGQYGINSIEFFNDFNTETKELFETGLALRVILWI 77
Query: 62 FSDKSFTFKKKVTPVTFLIKKAAGIQKGSAK 92
K+F F+ ++ ++ L+K+ ++ +AK
Sbjct: 78 NVMKAFYFELQMPKISNLLKEYYKVECEAAK 108
>POMBASE|SPAC1610.02c [details] [associations]
symbol:SPAC1610.02c "mitochondrial ribosomal protein
subunit L1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR002143 InterPro:IPR005879
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 PomBase:SPAC1610.02c EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 TIGRFAMs:TIGR01170
RefSeq:NP_001018241.2 ProteinModelPortal:Q9P6M9 STRING:Q9P6M9
EnsemblFungi:SPAC1610.02c.1 GeneID:3361520 KEGG:spo:SPAC1610.02c
OMA:YLRAFEV OrthoDB:EOG49631S NextBio:20811562 Uniprot:Q9P6M9
Length = 253
Score = 150 (57.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/147 (29%), Positives = 72/147 (48%)
Query: 143 NKIYSFDSAITLIKEAATAKFDESIDISIH------LNVNIK--RSDQIVRGSIVLPFST 194
NK +F + + EA K+ +S+ IS+ L++ +K R RG I P
Sbjct: 37 NKKSNFPALAMTVPEAT--KYLKSVSISVPYVGSYMLSIALKSNRRAPSARGQIAFPHPF 94
Query: 195 GKKIYIAAFVPKEKYEQAKIAGADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGK 254
+ I F ++A GA VG EDL +KI++ + A P S ++ + K
Sbjct: 95 QEPPKICVFAKGAAADEALKLGATYVGAEDLVKKIQTEPLEFSKCFAHPNSAELLPQVAK 154
Query: 255 ILGPKGLMPNIKDGTLNSDILTAIKNA 281
+LG K LMP+IK GT++ ++ I++A
Sbjct: 155 LLGSKRLMPSIKRGTISDELKPLIESA 181
>TIGR_CMR|NSE_0681 [details] [associations]
symbol:NSE_0681 "ribosomal protein L1" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042255 "ribosome
assembly" evidence=ISS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_506559.1
ProteinModelPortal:Q2GD87 STRING:Q2GD87 GeneID:3932130
KEGG:nse:NSE_0681 PATRIC:22681381 OMA:CESVFAT
BioCyc:NSEN222891:GHFU-695-MONOMER Uniprot:Q2GD87
Length = 209
Score = 142 (55.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 45/147 (30%), Positives = 76/147 (51%)
Query: 144 KIYSFDSAITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIV-LPFSTGKKIYIAA 202
+I S D A+ + E A KF+ES+D+++H D + G + PF G+ +
Sbjct: 3 EIVSADDALRKLLEKA-CKFNESVDVAVHFF----SKDSVKIGCVFKYPFYFGR---VLV 54
Query: 203 FVPKEKYEQAKIAGADIV-GMEDLAQKIKS--NEVS-CDLVIASPESMHIVSSLGKILGP 258
F + + A++ ++ G E+L ++IK+ N V +ASP M +S + +ILGP
Sbjct: 55 FCGEP--QMAQVIDENVTYGGEELIERIKAKKNFVKGYKYSLASPPMMSKLSKIARILGP 112
Query: 259 KGLMPNIKDGTLNSDILTAIKNAKSGQ 285
+GLMP+ K G + DI A+ G+
Sbjct: 113 RGLMPDSKYGLVTHDIAAAVTAILGGK 139
>SGD|S000002523 [details] [associations]
symbol:MRPL1 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IPI] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IPI] [GO:0006412 "translation" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=IC] InterPro:IPR002143
InterPro:IPR005879 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 SGD:S000002523
Prosite:PS01199 EMBL:BK006938 GO:GO:0003723 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 EMBL:Z48758 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 TIGRFAMs:TIGR01170 OMA:YLRAFEV OrthoDB:EOG49631S
EMBL:AY557683 PIR:S52681 RefSeq:NP_010401.1
ProteinModelPortal:Q04599 SMR:Q04599 DIP:DIP-5223N IntAct:Q04599
MINT:MINT-569104 STRING:Q04599 PaxDb:Q04599 PeptideAtlas:Q04599
EnsemblFungi:YDR116C GeneID:851694 KEGG:sce:YDR116C CYGD:YDR116c
HOGENOM:HOG000248778 NextBio:969353 Genevestigator:Q04599
GermOnline:YDR116C Uniprot:Q04599
Length = 285
Score = 139 (54.0 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 40/136 (29%), Positives = 73/136 (53%)
Query: 151 AITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYIAAFVPKE-KY 209
A+ ++ A + I++ V +R + GS+ P + I IAAF E K
Sbjct: 80 ALRYLRAAEVGRPQSQQTINLTTLVVGERGTAPLSGSVTFPKPL-RYIKIAAFTNDESKL 138
Query: 210 EQAKIAGAD-IVGMEDLAQKIKSNEVSCDL--VIASPESMHIVSS-LGKILGPKGLMPNI 265
E+ + + ++G DL KIKS E+S D A+P+ + + S + +ILGP+G++P++
Sbjct: 139 EELREKYPNHLIGGADLVAKIKSGEISVDFDKAFATPDIVPALQSQVARILGPRGVLPSV 198
Query: 266 KDGTLNSDILTAIKNA 281
K GT++ DI + ++ +
Sbjct: 199 KKGTVSDDISSLLQES 214
>CGD|CAL0000752 [details] [associations]
symbol:orf19.5698 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 CGD:CAL0000752 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
EMBL:AACQ01000261 RefSeq:XP_710527.1 ProteinModelPortal:Q59LA1
STRING:Q59LA1 GeneID:3647879 KEGG:cal:CaO19.5698 Uniprot:Q59LA1
Length = 269
Score = 134 (52.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/141 (25%), Positives = 67/141 (47%)
Query: 151 AITLIKEAATAKFDESIDISIHLNVNIKRSDQIVRGSIVLPFSTGKKIYIAAFVPKEKY- 209
A+ +++ K + IS ++ V ++ + G + +PF +K F ++
Sbjct: 66 ALNILRSLEVGKPADKTTISCNIYVRQEQGAAPISGKVDIPFPVQRKTKPVVFTTQQPVI 125
Query: 210 EQAKIAGADIVGMEDLAQKIKSNEVSCDL---VIASPESMHIVSSLGKILGPKGLMPNIK 266
E+ K AG + G +L K + E++ D+ A+ E + S+ +ILG GL P K
Sbjct: 126 EELKKAGIETFGGRELLDKFINQELTPDMFTHAFATQEMAPHLKSVARILGRAGLQPTAK 185
Query: 267 DGTLNSDILTAIKNAKSGQIR 287
GT+ D+ T + +S QI+
Sbjct: 186 KGTITDDVNTILDVMRSFQIK 206
>UNIPROTKB|H0Y8N7 [details] [associations]
symbol:MRPL1 "39S ribosomal protein L1, mitochondrial"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR005879 InterPro:IPR016095 InterPro:IPR023674
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.40.50.790 InterPro:IPR024663
Pfam:PF13003 TIGRFAMs:TIGR01170 EMBL:AC112225 EMBL:AC114801
HGNC:HGNC:14275 Ensembl:ENST00000502384 Uniprot:H0Y8N7
Length = 231
Score = 110 (43.8 bits), Expect = 0.00055, P = 0.00055
Identities = 40/150 (26%), Positives = 71/150 (47%)
Query: 144 KIYSFDSAITLIKEAATAKFD---ESI--DISIHLNVNIKRSDQIVRGSIVLPFSTGKKI 198
+IY + A+ L+K+ F +S+ D+++ + + K++ + + LP+ +I
Sbjct: 49 QIYEVEKAVHLLKKFQILDFTSPKQSVYLDLTLDMALGKKKNVEPFTSVLSLPYPFASEI 108
Query: 199 Y-IAAFVPKEKYEQAKIA---GADIVGMEDLAQKIKSNEVSCDLVIASPESMHIVSSLGK 254
+A F E + KIA GA G L QKI +E+ D +A PE M ++ L K
Sbjct: 109 NKVAVFT--ENASEVKIAEENGAAFAGGTSLIQKIWDDEIVADFYVAVPEIMPELNRLRK 166
Query: 255 ILGPKGLMPNIKDGTLNSDILTAIKNAKSG 284
L K P + ++ DI ++ K+G
Sbjct: 167 KLNKK--YPKLSRNSIGRDIPKMLELFKNG 194
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 289 289 0.00088 115 3 11 22 0.40 34
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 564 (60 KB)
Total size of DFA: 152 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.96u 0.11s 23.07t Elapsed: 00:00:02
Total cpu time: 22.97u 0.11s 23.08t Elapsed: 00:00:02
Start: Thu Aug 15 16:22:34 2013 End: Thu Aug 15 16:22:36 2013