Query psy15221
Match_columns 70
No_of_seqs 103 out of 623
Neff 5.0
Searched_HMMs 29240
Date Sat Aug 17 00:19:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15221.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15221hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i1m_U 30S ribosomal protein S 99.9 9.9E-28 3.4E-32 145.4 -7.8 65 1-65 1-65 (71)
2 3r8n_U 30S ribosomal protein S 99.8 7.4E-24 2.5E-28 121.4 -4.2 50 4-53 1-50 (51)
3 3bbn_U Ribosomal protein S21; 99.8 1.4E-23 4.7E-28 146.2 -7.5 58 1-58 96-153 (190)
4 2jvf_A De novo protein M7; tet 53.7 15 0.00053 22.2 3.4 25 3-27 22-46 (96)
5 1q9u_A Uncharacterized protein 50.5 17 0.00059 21.9 3.3 28 1-28 4-31 (130)
6 1j3m_A The conserved hypotheti 50.2 12 0.00039 22.8 2.5 28 1-28 1-28 (129)
7 1ka5_A Phosphocarrier protein 34.2 43 0.0015 19.3 3.2 25 3-28 62-86 (88)
8 1pch_A Phosphocarrier protein; 33.3 42 0.0014 19.5 3.0 27 2-29 60-86 (88)
9 2een_A Hypothetical protein PH 32.1 9 0.00031 24.4 -0.1 34 3-37 137-170 (183)
10 3fio_A A cystathionine beta-sy 31.0 52 0.0018 16.5 2.9 19 3-21 2-20 (70)
11 2yh5_A DAPX protein, BAMC; lip 29.6 46 0.0016 20.7 2.9 19 10-28 21-39 (127)
12 1e0g_A Membrane-bound lytic mu 28.9 52 0.0018 15.8 2.6 18 3-20 4-21 (48)
13 2k53_A A3DK08 protein; NESG, C 28.2 57 0.0019 18.5 2.9 22 9-30 49-70 (76)
14 4a1k_A Putative L, D-transpept 27.2 37 0.0013 21.7 2.2 20 1-20 2-21 (165)
15 3ghd_A A cystathionine beta-sy 25.0 63 0.0022 17.4 2.6 18 4-21 3-20 (70)
16 3i7u_A AP4A hydrolase; nudix p 22.0 51 0.0017 19.5 2.0 14 5-18 33-46 (134)
17 1p90_A NAFY protein, hypotheti 21.5 1E+02 0.0035 19.2 3.4 25 3-27 90-115 (145)
18 3n10_A Adenylate cyclase 2; CY 21.5 79 0.0027 19.8 2.9 29 2-30 137-165 (179)
19 2k6l_A Putative uncharacterize 21.5 38 0.0013 18.7 1.2 19 3-23 7-25 (51)
20 2azw_A MUTT/nudix family prote 21.4 74 0.0025 18.2 2.6 17 2-18 46-62 (148)
21 1kkl_H Phosphocarrier protein 20.2 97 0.0033 18.5 3.0 24 3-27 74-97 (100)
No 1
>3i1m_U 30S ribosomal protein S21; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_U* 2avy_U 2aw7_U 2vho_U 2vhp_U 3df1_U* 3df3_U* 3e1a_Q 3e1c_Q 1vs5_U 3i1o_U 3i1q_U 3i1s_U 3i1z_U 3i21_U 3izv_Y* 3izw_Y* 3kc4_U 3or9_U 3ora_U ...
Probab=99.91 E-value=9.9e-28 Score=145.42 Aligned_cols=65 Identities=58% Similarity=0.981 Sum_probs=50.9
Q ss_pred CcEeeccCCCcHHHHHHHHHHHHHhhchHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHhhcC
Q psy15221 1 MTIIRVKENEPFEVAIRRFKRTIEKTGLLTDLRAREFYEKPTTVRKRKLAAAIKRHYKRIRSQQL 65 (70)
Q Consensus 1 M~~V~V~~~E~ie~Alrrfkr~~~k~Gil~e~rrrr~yeKPs~krkrk~~ea~rR~rk~~r~~~~ 65 (70)
|++|.|+||||||.||++|+++|+++||+.|+++++||||||++++++..+|+++.++++++++.
T Consensus 1 M~~V~V~enE~ie~ALRrfKR~~~k~Gil~e~Rrr~~yEKPs~kRkrk~~~a~kR~~k~~~~~~~ 65 (71)
T 3i1m_U 1 MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENA 65 (71)
T ss_dssp ---CEEECCSSCCSCCCTTTTSSSTHHHHTTSSSCCCSSSHHHHHHHHHHTSCC-----------
T ss_pred CCeeEeCCCCCHHHHHHHHHHHHHHccHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999887654
No 2
>3r8n_U 30S ribosomal protein S21; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_U 3fih_U* 3j18_U* 2wwl_U 3oar_U 3oaq_U 3ofb_U 3ofa_U 3ofp_U 3ofx_U 3ofy_U 3ofo_U 3r8o_U 4a2i_U 4gd1_U 4gd2_U
Probab=99.84 E-value=7.4e-24 Score=121.41 Aligned_cols=50 Identities=66% Similarity=1.086 Sum_probs=47.9
Q ss_pred eeccCCCcHHHHHHHHHHHHHhhchHHHHHHHHhccChhHHHHHHHHHHH
Q psy15221 4 IRVKENEPFEVAIRRFKRTIEKTGLLTDLRAREFYEKPTTVRKRKLAAAI 53 (70)
Q Consensus 4 V~V~~~E~ie~Alrrfkr~~~k~Gil~e~rrrr~yeKPs~krkrk~~ea~ 53 (70)
|.|++|||||+||++|+++|+++||+.|+|+++||||||++++++..+|.
T Consensus 1 v~V~enE~ie~AlrrfkR~~~k~Gi~~e~r~r~~yeKPs~krkrk~~~a~ 50 (51)
T 3r8n_U 1 IKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAV 50 (51)
T ss_dssp CEECCCSSCCCCCCTTGGGSSTTHHHHHHHSCCCCSSHHHHHHHHHHHTT
T ss_pred CcCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHhhcCHHHHHHHHHHHhc
Confidence 68999999999999999999999999999999999999999999988874
No 3
>3bbn_U Ribosomal protein S21; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=99.83 E-value=1.4e-23 Score=146.20 Aligned_cols=58 Identities=34% Similarity=0.614 Sum_probs=52.5
Q ss_pred CcEeeccCCCcHHHHHHHHHHHHHhhchHHHHHHHHhccChhHHHHHHHHHHHHHHHH
Q psy15221 1 MTIIRVKENEPFEVAIRRFKRTIEKTGLLTDLRAREFYEKPTTVRKRKLAAAIKRHYK 58 (70)
Q Consensus 1 M~~V~V~~~E~ie~Alrrfkr~~~k~Gil~e~rrrr~yeKPs~krkrk~~ea~rR~rk 58 (70)
|++|.|++||+||.|||+|||+|+++||++|+|+++||||||++|+++..+|++|++|
T Consensus 96 M~~V~VkeNE~iE~ALRRFKRkveKeGIlrElRrRr~YEKPSeKRKRK~~eA~rR~rK 153 (190)
T 3bbn_U 96 NVQVVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRR 153 (190)
T ss_dssp -CCCCCCCCSSCCCCCCSSSTTTTTTHHHHSSSSCCCTTTTTTHHHHHHHHTTC----
T ss_pred ccEEEecCCCCHHHHHHHHHHHHHHccHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999888
No 4
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=53.65 E-value=15 Score=22.22 Aligned_cols=25 Identities=24% Similarity=0.525 Sum_probs=22.5
Q ss_pred EeeccCCCcHHHHHHHHHHHHHhhc
Q psy15221 3 IIRVKENEPFEVAIRRFKRTIEKTG 27 (70)
Q Consensus 3 ~V~V~~~E~ie~Alrrfkr~~~k~G 27 (70)
.|.|..|..+|+||..+-+.+.++|
T Consensus 22 dirvstgkeleralqelekalarag 46 (96)
T 2jvf_A 22 DIRVSTGKELERALQELEKALARAG 46 (96)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHHHT
T ss_pred EEEEcccHHHHHHHHHHHHHHHhcc
Confidence 4678889999999999999999988
No 5
>1q9u_A Uncharacterized protein APC35924; structural genomics, Zn-binding proteins, PSI, protein structure initiative; HET: CSW CME; 1.80A {Geobacillus stearothermophilus} SCOP: d.129.7.1
Probab=50.53 E-value=17 Score=21.92 Aligned_cols=28 Identities=18% Similarity=0.354 Sum_probs=22.6
Q ss_pred CcEeeccCCCcHHHHHHHHHHHHHhhch
Q psy15221 1 MTIIRVKENEPFEVAIRRFKRTIEKTGL 28 (70)
Q Consensus 1 M~~V~V~~~E~ie~Alrrfkr~~~k~Gi 28 (70)
|-.+.+..+-|+|.++.+++..+...|+
T Consensus 4 m~~~~~~s~~s~~e~~~~l~~al~~~Gf 31 (130)
T 1q9u_A 4 MFHYTVDVSTGMNETIERLEESLKQEGF 31 (130)
T ss_dssp CSEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred cEEEEEEcCCCHHHHHHHHHHHHHHCCC
Confidence 4455566566999999999999999885
No 6
>1j3m_A The conserved hypothetical protein TT1751; X-RAY crystallography, structural genomics, riken structural genomics/proteomics initiative; 2.00A {Thermus thermophilus} SCOP: d.129.7.1
Probab=50.18 E-value=12 Score=22.80 Aligned_cols=28 Identities=18% Similarity=0.264 Sum_probs=21.6
Q ss_pred CcEeeccCCCcHHHHHHHHHHHHHhhch
Q psy15221 1 MTIIRVKENEPFEVAIRRFKRTIEKTGL 28 (70)
Q Consensus 1 M~~V~V~~~E~ie~Alrrfkr~~~k~Gi 28 (70)
|-.+.+..+-|+|.++.+++..+...|+
T Consensus 1 m~~~~~~s~~s~~e~~~~l~~al~~~Gf 28 (129)
T 1j3m_A 1 MTGMRKTLKATLAEARAQVEAALKEEGF 28 (129)
T ss_dssp --CEEEEESSCHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEEcCCCHHHHHHHHHHHHHHCCC
Confidence 4455566566999999999999999885
No 7
>1ka5_A Phosphocarrier protein HPR; open faced beta-sandwich, structural proteomics in europe, spine, structural genomics, ligand transport; NMR {Staphylococcus aureus} SCOP: d.94.1.1 PDB: 1qr5_A 1txe_A
Probab=34.15 E-value=43 Score=19.33 Aligned_cols=25 Identities=24% Similarity=0.302 Sum_probs=19.4
Q ss_pred EeeccCCCcHHHHHHHHHHHHHhhch
Q psy15221 3 IIRVKENEPFEVAIRRFKRTIEKTGL 28 (70)
Q Consensus 3 ~V~V~~~E~ie~Alrrfkr~~~k~Gi 28 (70)
+|.+ +|++-+.|+..|...+..+|+
T Consensus 62 ~i~a-~G~De~~A~~~l~~l~~~~~~ 86 (88)
T 1ka5_A 62 TIYA-DGSDESDAIQAISDVLSKEGL 86 (88)
T ss_dssp EEEE-ESSSHHHHHHHHHHHHHHHTS
T ss_pred EEEE-eCCCHHHHHHHHHHHHHHcCC
Confidence 4444 688999999999988876553
No 8
>1pch_A Phosphocarrier protein; phosphotransferase; 1.80A {Mycoplasma capricolum} SCOP: d.94.1.1
Probab=33.35 E-value=42 Score=19.51 Aligned_cols=27 Identities=26% Similarity=0.399 Sum_probs=21.4
Q ss_pred cEeeccCCCcHHHHHHHHHHHHHhhchH
Q psy15221 2 TIIRVKENEPFEVAIRRFKRTIEKTGLL 29 (70)
Q Consensus 2 ~~V~V~~~E~ie~Alrrfkr~~~k~Gil 29 (70)
++|.+ +|++-|.|+..|...+...|+.
T Consensus 60 i~i~a-~G~De~~Al~~l~~l~~~~~~~ 86 (88)
T 1pch_A 60 ITIQA-DGNDADQAIQAIKQTMIDTALI 86 (88)
T ss_dssp EEEEE-ESTTHHHHHHHHHHHHHHTTSS
T ss_pred EEEEE-eCCCHHHHHHHHHHHHHhCCcc
Confidence 34555 6889999999999988887753
No 9
>2een_A Hypothetical protein PH1819; dimer, NPPSFA, national project on Pro structural and functional analyses; 1.65A {Pyrococcus horikoshii}
Probab=32.09 E-value=9 Score=24.45 Aligned_cols=34 Identities=18% Similarity=0.431 Sum_probs=26.2
Q ss_pred EeeccCCCcHHHHHHHHHHHHHhhchHHHHHHHHh
Q psy15221 3 IIRVKENEPFEVAIRRFKRTIEKTGLLTDLRAREF 37 (70)
Q Consensus 3 ~V~V~~~E~ie~Alrrfkr~~~k~Gil~e~rrrr~ 37 (70)
.+.+.++++++.+...|...+..-|| .++-.+.|
T Consensus 137 E~e~~~~~~~~~~~~~~~~l~~~lgi-~~~~~~sY 170 (183)
T 2een_A 137 ETLVKEKDEIPEAVEKLEKILRELGV-EKFERRSY 170 (183)
T ss_dssp EEECSSGGGHHHHHHHHHHHHHHHTC-CCBCCSCH
T ss_pred EEecCCcccHHHHHHHHHHHHHHcCC-CCceeccH
Confidence 46677777999999999999999998 54433333
No 10
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=30.97 E-value=52 Score=16.54 Aligned_cols=19 Identities=16% Similarity=0.289 Sum_probs=15.6
Q ss_pred EeeccCCCcHHHHHHHHHH
Q psy15221 3 IIRVKENEPFEVAIRRFKR 21 (70)
Q Consensus 3 ~V~V~~~E~ie~Alrrfkr 21 (70)
.+.|.++.+++.|+..|..
T Consensus 2 ~~~v~~~~~~~~a~~~m~~ 20 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSR 20 (70)
T ss_dssp EEEECTTCBHHHHHHHHHH
T ss_pred CeEECCCCcHHHHHHHHHH
Confidence 3668889999999988865
No 11
>2yh5_A DAPX protein, BAMC; lipid binding protein, lipoprotein, BAM complex; 1.25A {Escherichia coli} PDB: 3sns_A
Probab=29.63 E-value=46 Score=20.70 Aligned_cols=19 Identities=37% Similarity=0.754 Sum_probs=17.3
Q ss_pred CcHHHHHHHHHHHHHhhch
Q psy15221 10 EPFEVAIRRFKRTIEKTGL 28 (70)
Q Consensus 10 E~ie~Alrrfkr~~~k~Gi 28 (70)
+++|+|++++-..+++.|+
T Consensus 21 ~~fdraW~rvg~ALdr~Gf 39 (127)
T 2yh5_A 21 GPFNVVWQRLPAALEKVGM 39 (127)
T ss_dssp SCHHHHHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHHHhCCC
Confidence 4799999999999999885
No 12
>1e0g_A Membrane-bound lytic murein transglycosylase D; cell WALL, hydrolase, glycosidase, lipoprotein, outer membrane, multigene family; NMR {Escherichia coli} SCOP: d.7.1.1
Probab=28.90 E-value=52 Score=15.83 Aligned_cols=18 Identities=17% Similarity=0.372 Sum_probs=14.9
Q ss_pred EeeccCCCcHHHHHHHHH
Q psy15221 3 IIRVKENEPFEVAIRRFK 20 (70)
Q Consensus 3 ~V~V~~~E~ie~Alrrfk 20 (70)
+..|+.|+++...-++|.
T Consensus 4 ~y~V~~GDtl~~Ia~~~~ 21 (48)
T 1e0g_A 4 TYRVRKGDSLSSIAKRHG 21 (48)
T ss_dssp EEEECTTCCHHHHHHHHT
T ss_pred EEEEcCCCcHHHHHHHHC
Confidence 567899999999888874
No 13
>2k53_A A3DK08 protein; NESG, CMR9, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium thermocellum atcc 27405}
Probab=28.23 E-value=57 Score=18.49 Aligned_cols=22 Identities=14% Similarity=0.226 Sum_probs=16.6
Q ss_pred CCcHHHHHHHHHHHHHhhchHH
Q psy15221 9 NEPFEVAIRRFKRTIEKTGLLT 30 (70)
Q Consensus 9 ~E~ie~Alrrfkr~~~k~Gil~ 30 (70)
|-|+|..+..|+..++..|++.
T Consensus 49 giD~d~ll~eLn~~i~~~~~~~ 70 (76)
T 2k53_A 49 GIDADKLVKELNEYFEKKEVLE 70 (76)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhhcchHh
Confidence 4566777788888888888774
No 14
>4a1k_A Putative L, D-transpeptidase YKUD; transferase, peptidoglycan synthesis; HET: CME; 1.75A {Bacillus subtilis} PDB: 4a1j_A 4a1i_A* 1y7m_A 3zqd_A 4a52_A*
Probab=27.17 E-value=37 Score=21.69 Aligned_cols=20 Identities=20% Similarity=0.398 Sum_probs=16.4
Q ss_pred CcEeeccCCCcHHHHHHHHH
Q psy15221 1 MTIIRVKENEPFEVAIRRFK 20 (70)
Q Consensus 1 M~~V~V~~~E~ie~Alrrfk 20 (70)
|.+-.|++||+++..-++|.
T Consensus 2 ~~~y~V~~GdtL~~IA~~f~ 21 (165)
T 4a1k_A 2 MLTYQVKQGDTLNSIAADFR 21 (165)
T ss_dssp CEEEECCTTCCHHHHHHHTT
T ss_pred CEEEEECCCCCHHHHHHHhC
Confidence 67888999999998877654
No 15
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=24.97 E-value=63 Score=17.41 Aligned_cols=18 Identities=17% Similarity=0.320 Sum_probs=15.0
Q ss_pred eeccCCCcHHHHHHHHHH
Q psy15221 4 IRVKENEPFEVAIRRFKR 21 (70)
Q Consensus 4 V~V~~~E~ie~Alrrfkr 21 (70)
|.|.++.++..|++.+..
T Consensus 3 vtv~p~~tv~ea~~~M~~ 20 (70)
T 3ghd_A 3 IVVQPKDTVDRVAKILSR 20 (70)
T ss_dssp EEECTTCBHHHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHH
Confidence 678889999999988754
No 16
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=21.99 E-value=51 Score=19.50 Aligned_cols=14 Identities=21% Similarity=0.190 Sum_probs=9.8
Q ss_pred eccCCCcHHHHHHH
Q psy15221 5 RVKENEPFEVAIRR 18 (70)
Q Consensus 5 ~V~~~E~ie~Alrr 18 (70)
.|..|||++.|+.|
T Consensus 33 ~ve~gEt~~~aa~R 46 (134)
T 3i7u_A 33 NIEPGEKPEETAVR 46 (134)
T ss_dssp ECCTTCCHHHHHHH
T ss_pred EecCCCCHHHHHHH
Confidence 46778888777643
No 17
>1p90_A NAFY protein, hypothetical protein; ribonuclease H motif, protein binding; 1.80A {Azotobacter vinelandii} SCOP: c.55.5.2
Probab=21.53 E-value=1e+02 Score=19.18 Aligned_cols=25 Identities=12% Similarity=0.025 Sum_probs=18.6
Q ss_pred Eeecc-CCCcHHHHHHHHHHHHHhhc
Q psy15221 3 IIRVK-ENEPFEVAIRRFKRTIEKTG 27 (70)
Q Consensus 3 ~V~V~-~~E~ie~Alrrfkr~~~k~G 27 (70)
.|... ++.+|+.||..|...+....
T Consensus 90 ~v~~~~~~~~i~eal~~l~~~L~~~~ 115 (145)
T 1p90_A 90 HPLKKPKGCAAQEAIAELQTVMAGSP 115 (145)
T ss_dssp EEEECTTCEEHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCCCHHHHHHHHHHHhcCCC
Confidence 34443 46799999999988887665
No 18
>3n10_A Adenylate cyclase 2; CYTH domain, antiparallel barrel, product complex, cyclic AM; HET: CMP; 1.60A {Yersinia pestis} PDB: 3n0z_A* 3n0y_A* 2fjt_A
Probab=21.50 E-value=79 Score=19.79 Aligned_cols=29 Identities=10% Similarity=0.107 Sum_probs=23.5
Q ss_pred cEeeccCCCcHHHHHHHHHHHHHhhchHH
Q psy15221 2 TIIRVKENEPFEVAIRRFKRTIEKTGLLT 30 (70)
Q Consensus 2 ~~V~V~~~E~ie~Alrrfkr~~~k~Gil~ 30 (70)
+.+.+.++++++.|...+...+..-||-.
T Consensus 137 iE~e~~~~~~~~~~~~~~~~l~~~LGl~~ 165 (179)
T 3n10_A 137 IAIMTDDATELDKLKAECRDFANTFGLQV 165 (179)
T ss_dssp EEEEESCGGGHHHHHHHHHHHHHHHTCCG
T ss_pred EEEEeCCCccHHHHHHHHHHHHHHcCcCh
Confidence 35667788889999999999998888743
No 19
>2k6l_A Putative uncharacterized protein; xanthonomas axonopodis, RHH, structural proteomics, plasmid, hypothetical DNA binding protein; NMR {Xanthomonas axonopodis PV}
Probab=21.49 E-value=38 Score=18.73 Aligned_cols=19 Identities=21% Similarity=0.254 Sum_probs=13.0
Q ss_pred EeeccCCCcHHHHHHHHHHHH
Q psy15221 3 IIRVKENEPFEVAIRRFKRTI 23 (70)
Q Consensus 3 ~V~V~~~E~ie~Alrrfkr~~ 23 (70)
+|.|.+ ++|++||.|=...
T Consensus 7 tv~vs~--d~d~~lR~~l~~~ 25 (51)
T 2k6l_A 7 NIAVSP--DVDQSVRMFIAAQ 25 (51)
T ss_dssp EEEECH--HHHHHHHHHHHHH
T ss_pred EEEeCH--HHHHHHHHHHHHh
Confidence 466653 5999999885443
No 20
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=21.35 E-value=74 Score=18.21 Aligned_cols=17 Identities=29% Similarity=0.184 Sum_probs=12.0
Q ss_pred cEeeccCCCcHHHHHHH
Q psy15221 2 TIIRVKENEPFEVAIRR 18 (70)
Q Consensus 2 ~~V~V~~~E~ie~Alrr 18 (70)
|.-.|..||+++.|+.|
T Consensus 46 PgG~ve~gE~~~~aa~R 62 (148)
T 2azw_A 46 PGGEIEGTETKEEAIHR 62 (148)
T ss_dssp SEEECCTTCCHHHHHHH
T ss_pred CCcccCCCCCHHHHHHH
Confidence 44567889998877544
No 21
>1kkl_H Phosphocarrier protein HPR; phosphorylation, protein kinase, bacteria, protein/protein interaction, transferase; 2.80A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1kkm_H*
Probab=20.21 E-value=97 Score=18.50 Aligned_cols=24 Identities=13% Similarity=0.155 Sum_probs=18.2
Q ss_pred EeeccCCCcHHHHHHHHHHHHHhhc
Q psy15221 3 IIRVKENEPFEVAIRRFKRTIEKTG 27 (70)
Q Consensus 3 ~V~V~~~E~ie~Alrrfkr~~~k~G 27 (70)
+|.+ +|++-+.|+..|...+..+|
T Consensus 74 ~i~a-~G~Dee~Al~~l~~li~~~~ 97 (100)
T 1kkl_H 74 TISA-SGADENDALNALEETMKSER 97 (100)
T ss_dssp EEEE-ESTTHHHHHHHHHHHHHHTT
T ss_pred EEEE-eCCCHHHHHHHHHHHHHhcC
Confidence 4445 68899999999988776534
Done!