BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy1523
         (190 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q14106|TOB2_HUMAN Protein Tob2 OS=Homo sapiens GN=TOB2 PE=1 SV=2
          Length = 344

 Score = 76.3 bits (186), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 64/125 (51%), Gaps = 31/125 (24%)

Query: 40  VSYRIGEKGDVKILYRESWDRKTSAPGAAVSGPPTLSPSSLDATADPSLHAAAMDREVHK 99
           VSY+IGEKG VK+LY                         LD +      A  +D+E+  
Sbjct: 99  VSYQIGEKGAVKVLY-------------------------LDDSE--GCGAPELDKEIKS 131

Query: 100 TFNPEARVFRPVEVCLASLSLNGEERSASPSPTKGSPTFLPRSTAPLTFTTASFAQTKFG 159
           +FNP+A+VF P+     S   +     +       SPTF+PRS  P+TFTTASFA TKFG
Sbjct: 132 SFNPDAQVFVPI----GSQDSSLSNSPSPSFGQSPSPTFIPRSAQPITFTTASFAATKFG 187

Query: 160 STKLK 164
           STK+K
Sbjct: 188 STKMK 192


>sp|Q9JM55|TOB2_MOUSE Protein Tob2 OS=Mus musculus GN=Tob2 PE=2 SV=1
          Length = 345

 Score = 71.2 bits (173), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 64/125 (51%), Gaps = 31/125 (24%)

Query: 40  VSYRIGEKGDVKILYRESWDRKTSAPGAAVSGPPTLSPSSLDATADPSLHAAAMDREVHK 99
           VSY+IGEKG VK+LY            +  SG P L                  D+E+  
Sbjct: 99  VSYQIGEKGVVKVLYLGD---------SEASGTPEL------------------DKEIKS 131

Query: 100 TFNPEARVFRPVEVCLASLSLNGEERSASPSPTKGSPTFLPRSTAPLTFTTASFAQTKFG 159
           +FNP+A+VF P+     S   +     +       SPTF+PRS  P+TFTTASFA TKFG
Sbjct: 132 SFNPDAQVFVPI----GSQDSSLSSSPSPSFGQSPSPTFIPRSAQPITFTTASFAATKFG 187

Query: 160 STKLK 164
           STK+K
Sbjct: 188 STKMK 192


>sp|P50616|TOB1_HUMAN Protein Tob1 OS=Homo sapiens GN=TOB1 PE=1 SV=1
          Length = 345

 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 74/133 (55%), Gaps = 31/133 (23%)

Query: 40  VSYRIGEKGDVKILYRESWDRKTSAPGAAVSGPPTLSPSSLDATADPSLHAAAMDREVHK 99
           VSY+IGEKG VK+LY +                            D + +   +D+E+  
Sbjct: 99  VSYQIGEKGPVKVLYVD----------------------------DNNENGCELDKEIKN 130

Query: 100 TFNPEARVFRPVEVCLASLSLNGEERSASPSPTKGSPTFLPRSTAPLTFTTASFAQTKFG 159
           +FNPEA+VF P+    +S+S +        +    SPTF+PRST PLTFTTA+FA TKFG
Sbjct: 131 SFNPEAQVFMPISDPASSVSSSPSPPFGHSAAV--SPTFMPRSTQPLTFTTATFAATKFG 188

Query: 160 STKLKTNSKRTNR 172
           STK+K NS R+N+
Sbjct: 189 STKMK-NSGRSNK 200


>sp|Q8R5K6|TOB1_RAT Protein Tob1 OS=Rattus norvegicus GN=Tob1 PE=2 SV=1
          Length = 365

 Score = 60.1 bits (144), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 32/144 (22%)

Query: 40  VSYRIGEKGDVKILYRESWDRKTSAPGAAVSGPPTLSPSSLDATADPSLHAAAMDREVHK 99
           VSY+IGEKG VK+LY +                            D + +   +D+E+  
Sbjct: 99  VSYQIGEKGPVKVLYVD----------------------------DSNENGCELDKEIKN 130

Query: 100 TFNPEARVFRPVEVCLASLSLNGEERSASPSPTKGSPTFLPRSTAPLTFTTASFAQTKFG 159
           +FNPEA+VF P+    +S+S +        +    SPTF+PRST PLTFTTA+FA TKFG
Sbjct: 131 SFNPEAQVFMPISDPASSVSSSPSPPFGHSAAV--SPTFMPRSTQPLTFTTATFAATKFG 188

Query: 160 STKLKTN--SKRTNRGEPLSKDYN 181
           STK+K +  S +  R  P+S   N
Sbjct: 189 STKMKNSGRSSKVARTSPISLGLN 212


>sp|Q61471|TOB1_MOUSE Protein Tob1 OS=Mus musculus GN=Tob1 PE=2 SV=1
          Length = 363

 Score = 58.2 bits (139), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 31/133 (23%)

Query: 40  VSYRIGEKGDVKILYRESWDRKTSAPGAAVSGPPTLSPSSLDATADPSLHAAAMDREVHK 99
           VSY+IGEKG VK+LY +                            D S     +D+E+  
Sbjct: 99  VSYQIGEKGPVKVLYVD----------------------------DSSETGCELDKEIKN 130

Query: 100 TFNPEARVFRPVEVCLASLSLNGEERSASPSPTKGSPTFLPRSTAPLTFTTASFAQTKFG 159
           +FNPE +VF P+    +S+S +        +    SPTF+PRST PLTFTTA+FA TKFG
Sbjct: 131 SFNPEPQVFMPISDPASSVSSSPSPPFGHSAAV--SPTFMPRSTQPLTFTTATFAATKFG 188

Query: 160 STKLKTNSKRTNR 172
           STK+K NS R+++
Sbjct: 189 STKMK-NSGRSSK 200


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.310    0.126    0.361 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,610,087
Number of Sequences: 539616
Number of extensions: 3446652
Number of successful extensions: 133746
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 23085
Number of HSP's gapped (non-prelim): 56597
length of query: 190
length of database: 191,569,459
effective HSP length: 111
effective length of query: 79
effective length of database: 131,672,083
effective search space: 10402094557
effective search space used: 10402094557
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)