BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15236
(176 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242247187|ref|NP_001156170.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Acyrthosiphon pisum]
gi|239789402|dbj|BAH71327.1| ACYPI004623 [Acyrthosiphon pisum]
Length = 174
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 34 WLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYP 93
W PG PKTEEER AAKKY LLPEEYE PDDG GDYP LP DS+ +YPWD P
Sbjct: 30 WKPGPYPKTEEERLAAAKKYGLLPEEYEPHPDDGLGFGDYPKLPDIGQDSKSEYYPWDCP 89
Query: 94 MFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQ-LAYMVGILGTISLVLKYFCWEK 152
N+GE + + G R W++ L+ G+ G L+L W K
Sbjct: 90 EHNRNFGEIMHVHADMWGSDKGDPNYKEKARFPDWQRVLSLFAGVFGISGLMLSGDYWCK 149
Query: 153 RY--YYPKFDSPKYQKGVVHYGYHQK 176
RY Y PK P Q+ V H+ Y K
Sbjct: 150 RYRPYMPK-QWP--QENVKHFTYSDK 172
>gi|321472407|gb|EFX83377.1| hypothetical protein DAPPUDRAFT_301888 [Daphnia pulex]
Length = 176
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 85/174 (48%), Gaps = 10/174 (5%)
Query: 3 KLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV 62
K +L V V LQ VR A + DW PG PKT+ ER AAKKY +LP++YE
Sbjct: 6 KKSLLHPVLRNNGVARLQ--FVRLAGYWNKDWKPGPYPKTDAERIAAAKKYGMLPQDYEP 63
Query: 63 QPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVN 122
PDDG GDYP LP D +DP Y WD P + NYGEP+ + Y E+ N
Sbjct: 64 YPDDGLGYGDYPKLPLISNDMKDPLYNWDMPDLKRNYGEPI-----HTQYDAYVEERLSN 118
Query: 123 QRI--SVWEQLAYMVGILGTISLVLKYFCWEKRYYYPKFDSPKYQK-GVVHYGY 173
RI + L+ +GI+G V F + Y + P+ K G HY +
Sbjct: 119 ARIQYTPMYMLSRFLGIMGAFLAVHLLFEYNDWYLKHPWTPPQLLKEGKTHYTF 172
>gi|332376729|gb|AEE63504.1| unknown [Dendroctonus ponderosae]
Length = 172
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 89/176 (50%), Gaps = 6/176 (3%)
Query: 1 MNKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEY 60
MN L ++ K+L + L + + D+ PG PKT+EER AAKKY + EEY
Sbjct: 1 MNSLTKGAKWKALWRQ-GLSPTTTAVRHHWNKDYKPGPFPKTQEERELAAKKYGVPIEEY 59
Query: 61 EVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDF-AISHYGMGFNEQ 119
E PDDG GDYP LP +++DPFYPWD P + N+GE L DF A++ + N Q
Sbjct: 60 EPYPDDGSGAGDYPKLPMISAENKDPFYPWDNPELKRNFGETLHEDFDALTEDRLDVNRQ 119
Query: 120 PVNQRISVWEQLAYMVGILGTISLVLKYFCWEKRYYYPKFDSPKYQKGVVHYGYHQ 175
+ +W+ +A + G ++ ++ F + Y +G HY + Q
Sbjct: 120 ---FHLPLWQLVAQFFAVTGGLAALI-LFAQPFKMYRAAVPPQYPNQGKTHYSFEQ 171
>gi|148227580|ref|NP_001091214.1| uncharacterized protein LOC100036987 [Xenopus laevis]
gi|120538062|gb|AAI29786.1| LOC100036987 protein [Xenopus laevis]
Length = 168
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 58/91 (63%)
Query: 19 LQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPH 78
LQ+++VR A + + LPG P T EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 32 LQRSAVRAASGVSKNDLPGPYPNTPEERAAAAKKYNMRVEDYEPYPDDGMGFGDYPKLPE 91
Query: 79 THYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
RDP+Y WD+P R N+GEP+ DF +
Sbjct: 92 KSQQERDPWYSWDHPDLRRNWGEPIQWDFDM 122
>gi|242014087|ref|XP_002427729.1| NADH-Ubiquinone oxidoreductase ASHI subunit [Pediculus humanus
corporis]
gi|212512170|gb|EEB14991.1| NADH-Ubiquinone oxidoreductase ASHI subunit [Pediculus humanus
corporis]
Length = 144
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 13 LGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGD 72
L + +L ++V+ Y PD+ PG PKTE ER AA+KYNLLPEEY+ PDDG A GD
Sbjct: 15 LDSLRTLSVSNVKQCHWY-PDFKPGPYPKTEAERNAAARKYNLLPEEYQPMPDDGDALGD 73
Query: 73 YPHLPH-THYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
YP L H Y+ RDP++ WD+P R ++ EP+P + I
Sbjct: 74 YPDLSHYKRYEDRDPYHHWDFPDMRRDFLEPVPMEAVI 111
>gi|133737016|gb|AAI33784.1| LOC100049132 protein [Xenopus laevis]
Length = 189
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 19 LQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPH 78
+Q+++VR A + + LPG PKT EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 23 VQRSAVRAASGVSKNDLPGPYPKTPEERATAAKKYNMRVEDYEPYPDDGMGFGDYPKLPE 82
Query: 79 THYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLA-YMVGI 137
RDP+Y WD+P R N+GEP+ DF + N + W + Y+ G
Sbjct: 83 KSQQERDPWYTWDHPDLRRNWGEPIQWDFDMYTR----NRVDTSPTALPWNTMCKYLFGF 138
Query: 138 LGTISLVLKYFCWEKRYYYP 157
+G ++ ++ EK YP
Sbjct: 139 IGF--MLFMFWVGEKYPVYP 156
>gi|134024124|gb|AAI35778.1| LOC733466 protein [Xenopus (Silurana) tropicalis]
Length = 197
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 4 LRVLSQVKSLGK--------VVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNL 55
+R L++ +LG +Q+++VR A + LPG PKT EE+ AAKKYN+
Sbjct: 8 VRSLTRRAALGAYSVSGDHGASLVQRSAVRAASGAAKNDLPGPYPKTPEEKAAAAKKYNM 67
Query: 56 LPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
E+YE PDDG GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 68 RVEDYEPYPDDGMGFGDYPRLPEKSQQERDPWYSWDHPDLRRNWGEPMQWDFDM 121
>gi|89267845|emb|CAJ82855.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa
[Xenopus (Silurana) tropicalis]
Length = 196
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 4 LRVLSQVKSLGK--------VVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNL 55
+R L++ +LG +Q+++VR A + LPG PKT EE+ AAKKYN+
Sbjct: 7 VRSLTRRAALGAYSVSGDHGASLVQRSAVRAASGAAKNDLPGPYPKTPEEKAAAAKKYNM 66
Query: 56 LPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
E+YE PDDG GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 67 RVEDYEPYPDDGMGFGDYPRLPEKSQQERDPWYSWDHPDLRRNWGEPMQWDFDM 120
>gi|348508603|ref|XP_003441843.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Oreochromis niloticus]
Length = 188
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 58/99 (58%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT 70
K G +S + R A + D LPG PKT EER AAKKYN+ E+YE PD+G
Sbjct: 15 KGKGSGISALLSGCRAASGLSKDSLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDNGEGF 74
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 75 GDYPKLPERSQQERDPWYQWDHPDLRRNWGEPMHWDFDM 113
>gi|157822261|ref|NP_001099830.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Rattus norvegicus]
gi|149040249|gb|EDL94287.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 (predicted),
isoform CRA_a [Rattus norvegicus]
gi|187469223|gb|AAI66889.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Rattus
norvegicus]
gi|187469243|gb|AAI66905.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Rattus
norvegicus]
gi|187469737|gb|AAI66906.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Rattus
norvegicus]
Length = 186
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 64/109 (58%), Gaps = 8/109 (7%)
Query: 8 SQVKSLGKVVSLQQNS-------VRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEY 60
S+ +LG V LQ+ S R AF T D +PG P+T EER AAKKYN+ E+Y
Sbjct: 4 SRAAALG-VRWLQRTSRCVVPLEARRAFHMTKDMMPGSYPRTPEERAAAAKKYNMRVEDY 62
Query: 61 EVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
E PDDG GDYP LP+ RDP+Y WD+P R N+GEP+ D +
Sbjct: 63 EPYPDDGMGYGDYPMLPNRSQHERDPWYEWDHPDLRLNWGEPIHWDLDM 111
>gi|317419493|emb|CBN81530.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
[Dicentrarchus labrax]
Length = 188
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 5 RVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQP 64
+ LS+ K G +S + R A + D +PG PKT EER AAKKYN+ E+YE P
Sbjct: 11 KALSKGKGSG--ISALLSGCRAASGGSKDVIPGPYPKTPEERAAAAKKYNMRVEDYEPYP 68
Query: 65 DDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQR 124
D+G GDYP LP RDP+Y WD+P R N+GEP+ DF + N +
Sbjct: 69 DNGEGYGDYPKLPDRSQHERDPWYKWDHPDLRRNWGEPMHWDFDMYIR----NRVDTSPT 124
Query: 125 ISVWEQLA-YMVGILGTISLVL 145
I W ++ Y+ G +G + L+
Sbjct: 125 IVPWPKMCKYLFGYIGFMLLMF 146
>gi|225716906|gb|ACO14299.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Esox lucius]
Length = 188
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 2 NKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
N R LS+ K G S + VR A + LPG PKT EER AAKKYN+ +EYE
Sbjct: 8 NWARALSKGK--GPAFSALLSQVRAASGPSKAMLPGPYPKTPEERAAAAKKYNMTVDEYE 65
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD+G GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 66 PMPDNGEGYGDYPKLPDRSQHERDPWYSWDHPDLRRNWGEPIHWDFDM 113
>gi|295148216|ref|NP_001171150.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Ovis aries]
gi|293631993|gb|ADE59477.1| NADH dehydrogenase ubiquinone 1 beta subcomplex 8 [Ovis aries]
Length = 186
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 51/81 (62%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG PKT EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQQ 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD+P R N+GEP+
Sbjct: 85 ERDPWYDWDHPDLRLNWGEPM 105
>gi|27807203|ref|NP_777092.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial precursor [Bos taurus]
gi|400525|sp|Q02372.1|NDUB8_BOVIN RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial; AltName: Full=Complex I-ASHI;
Short=CI-ASHI; AltName: Full=NADH-ubiquinone
oxidoreductase ASHI subunit; Flags: Precursor
gi|234|emb|CAA44894.1| NADH dehydrogenase [Bos taurus]
gi|58760352|gb|AAW82086.1| NADH dehydrogenase 1 beta subcomplex 8 [Bos taurus]
gi|74268207|gb|AAI03426.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa [Bos
taurus]
gi|154425692|gb|AAI51405.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa [Bos
taurus]
gi|296472659|tpg|DAA14774.1| TPA: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial precursor [Bos taurus]
gi|440912434|gb|ELR62004.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Bos grunniens mutus]
Length = 186
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT 70
K+ VV L RTA T D LPG PKT EER AAKKYN+ E+YE PDDG
Sbjct: 16 KAARNVVPL---GARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGTGY 72
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPL 103
GDYP LP RDP+Y WD+P R N+GEP+
Sbjct: 73 GDYPKLPDRSQQERDPWYDWDHPDLRLNWGEPM 105
>gi|149689752|ref|XP_001500331.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Equus caballus]
Length = 186
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 51/81 (62%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG PKT EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQQ 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD+P R N+GEP+
Sbjct: 85 ERDPWYDWDHPDLRLNWGEPM 105
>gi|221325626|ref|NP_001138314.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Sus scrofa]
gi|219563064|gb|ACL27891.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Sus scrofa]
Length = 186
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT 70
++ KVV L RTA T D PG PKT EER AAKKYN+ E+YE PDDG
Sbjct: 16 RAARKVVPL---GARTASHVTKDMFPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGY 72
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPL 103
GDYP LP RDP+Y WD+P R N+GEP+
Sbjct: 73 GDYPKLPDRSQQERDPWYDWDHPDLRLNWGEPI 105
>gi|195133007|ref|XP_002010931.1| GI21434 [Drosophila mojavensis]
gi|193907719|gb|EDW06586.1| GI21434 [Drosophila mojavensis]
Length = 175
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 4 LRVLSQVKSLGKVV-SLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV 62
++ LS VK L +LQ + VR + D+ PG PKTE+ER AAKKY LLPEEY+
Sbjct: 5 MKSLSLVKKLSAANPALQAHIVRNLAGWNKDYKPGPYPKTEKEREAAAKKYYLLPEEYKP 64
Query: 63 QPDDGFATGDYPHL-PHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPV 121
D+G GDYP + + +D +YP+DYP + N+ EP+ D + Y QP
Sbjct: 65 YADNGLGYGDYPKVGGGLGVEFKDNYYPYDYPEIKRNFNEPISADHDL--YSEDRYSQPD 122
Query: 122 NQRISVWEQLAYMVGILGTISLVLKYFCWEKRYYYPKFDSPKYQKGVVHYGYHQ 175
R S + G++G L L Y+ +K+ Y P GV HY + +
Sbjct: 123 YPRYSKSYYMLCFAGVMGGC-LALYYWLEDKKMYRPVAAKQYPADGVKHYTFER 175
>gi|351715584|gb|EHB18503.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Heterocephalus glaber]
Length = 186
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 51/81 (62%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG P+T EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHITKDLLPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD+P R N+GEP+
Sbjct: 85 ERDPWYAWDHPDLRMNWGEPI 105
>gi|297493884|gb|ADI40664.1| NADH dehydrogenase 1 beta subcomplex 8 [Rousettus leschenaultii]
Length = 154
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 51/81 (62%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG PKT EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 9 GARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPARSQH 68
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD+P R N+GEP+
Sbjct: 69 ERDPWYDWDHPDLRLNWGEPI 89
>gi|197101976|ref|NP_001127101.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial precursor [Pongo abelii]
gi|56403766|emb|CAI29672.1| hypothetical protein [Pongo abelii]
Length = 186
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMG-FNEQPVNQRISVWEQLAYMVGILGTI 141
RDP+Y WD P R N+GEP+ H+ + FN V+ + + + G +
Sbjct: 85 ERDPWYSWDQPDLRLNWGEPM-------HWHLDMFNRNRVDTSPILVSWNVMCMQLFGFL 137
Query: 142 SLVLKYFCWEKRYY 155
+ ++ + CW Y
Sbjct: 138 AFMI-FMCWVGEVY 150
>gi|269969381|sp|P0CB85.1|NDUB8_PONAB RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial; AltName: Full=Complex I-ASHI;
Short=CI-ASHI; AltName: Full=NADH-ubiquinone
oxidoreductase ASHI subunit; Flags: Precursor
gi|55733459|emb|CAH93408.1| hypothetical protein [Pongo abelii]
Length = 186
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMG-FNEQPVNQRISVWEQLAYMVGILGTI 141
RDP+Y WD P R N+GEP+ H+ + FN V+ + + + G +
Sbjct: 85 ERDPWYSWDQPDLRLNWGEPM-------HWHLDMFNRNRVDTSPILVSWNVMCMQLFGFL 137
Query: 142 SLVLKYFCWEKRYY 155
+ ++ + CW Y
Sbjct: 138 AFMI-FMCWVGEVY 150
>gi|74186808|dbj|BAE43264.1| unnamed protein product [Mus musculus]
Length = 157
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT 70
++ VV L+ R AF T D LPG P+T EER AAKKYN+ E+YE PDDG
Sbjct: 16 RTTRGVVPLE---ARRAFHMTKDMLPGSYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGY 72
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
GDYP LP+ RDP+Y WD+ R N+GEP+ D +
Sbjct: 73 GDYPMLPNRSQHERDPWYQWDHSELRMNWGEPIHWDLDM 111
>gi|380793877|gb|AFE68814.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial precursor, partial [Macaca mulatta]
Length = 174
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 51/81 (62%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG P+T EER AAKKYN+L E+YE PD+G GDYP LP
Sbjct: 13 GARTASRMTKDMLPGPYPRTPEERAAAAKKYNMLVEDYEPYPDEGMGYGDYPKLPDRSQH 72
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD P R N+GEP+
Sbjct: 73 ERDPWYSWDQPDLRLNWGEPM 93
>gi|195457002|ref|XP_002075382.1| GK17672 [Drosophila willistoni]
gi|194171467|gb|EDW86368.1| GK17672 [Drosophila willistoni]
Length = 175
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 1 MNKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEY 60
+ K L+Q K L SL + +VR + D+ P PKTE+ER AAKKY LLPEEY
Sbjct: 4 LMKSACLAQ-KVLVANPSLARLAVRNLAGWNKDYKPAAYPKTEKERLAAAKKYYLLPEEY 62
Query: 61 EVQPDDGFATGDYPHLPHT-HYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQ 119
+ DDG GDYP + +++D +YPWD+P + N EP+ D + YG Q
Sbjct: 63 KPYADDGLGYGDYPKVGGGWGAEAKDTYYPWDFPEHKRNLHEPVSVDHDL--YGEDRYSQ 120
Query: 120 PVNQRISVWEQLAYMVGILGTISLVLKYFCW--EKRYYYPKFDSPKYQKGVVHYGYHQ 175
R S Y V LG +S L + W +K+ Y P + GV HY + Q
Sbjct: 121 AEPPRFS---NSYYFVSFLGVMSGCLALYYWLEDKKMYRPVAEKQYPGNGVKHYTFEQ 175
>gi|301777798|ref|XP_002924317.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Ailuropoda melanoleuca]
gi|281353521|gb|EFB29105.1| hypothetical protein PANDA_013631 [Ailuropoda melanoleuca]
Length = 186
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 51/81 (62%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG PKT EER AAKKYN+ E+Y+ PDDG GDYP LP
Sbjct: 25 GARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYQPYPDDGMGYGDYPKLPDRSQQ 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD+P R N+GEP+
Sbjct: 85 ERDPWYNWDHPDLRLNWGEPM 105
>gi|91091864|ref|XP_968949.1| PREDICTED: similar to NADH-ubiquinone oxidoreductase ashi subunit
[Tribolium castaneum]
gi|270001295|gb|EEZ97742.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8 [Tribolium
castaneum]
Length = 171
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 12/148 (8%)
Query: 33 DWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDY 92
D+ PG P TE+ER +AA++Y L P EYE P+DG+ GDYP LP DS+DPFYP+D
Sbjct: 32 DYKPGPYPLTEQERLRAAERYGLHPSEYEPYPNDGYGYGDYPKLPDISGDSKDPFYPYDN 91
Query: 93 PMFRTNYGEPLPNDFAI---SHYGMGFNEQPVNQRISVWEQLAYMVGIL-GTISLVLKYF 148
P + N+ EPL +F + Y + R +W Q A +G++ GT + Y
Sbjct: 92 PELKRNFNEPLHAEFDLLREDRYNVS-----AKLRYPLWVQWAQFLGVMFGTFGI---YC 143
Query: 149 CWEKRYYYPKFDSPKYQKGVVHYGYHQK 176
+EK + +Y + HY + K
Sbjct: 144 LFEKVKMFHPVVPRQYPRDGTHYTFEPK 171
>gi|13385558|ref|NP_080337.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial precursor [Mus musculus]
gi|47117308|sp|Q9D6J5.1|NDUB8_MOUSE RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial; AltName: Full=Complex I-ASHI;
Short=CI-ASHI; AltName: Full=NADH-ubiquinone
oxidoreductase ASHI subunit; Flags: Precursor
gi|12850912|dbj|BAB28893.1| unnamed protein product [Mus musculus]
gi|28175462|gb|AAH43019.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Mus musculus]
gi|148709987|gb|EDL41933.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Mus musculus]
Length = 186
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT 70
++ VV L+ R AF T D LPG P+T EER AAKKYN+ E+YE PDDG
Sbjct: 16 RTTRGVVPLE---ARRAFHMTKDMLPGSYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGY 72
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
GDYP LP+ RDP+Y WD+ R N+GEP+ D +
Sbjct: 73 GDYPMLPNRSQHERDPWYQWDHSELRMNWGEPIHWDLDM 111
>gi|269784699|ref|NP_001161450.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Nasonia vitripennis]
Length = 174
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 6 VLSQVKSLGKVVSLQQNSVRTAFV---YTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV 62
+L+++ ++ ++ S Q++ + + + DW+ PKTE+ER+ AA+KYNL P+EY+
Sbjct: 4 LLNKIPNILRI-SFQRDICSSHSINAHWNKDWIAKPYPKTEQERKIAAEKYNLHPDEYKA 62
Query: 63 QPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVN 122
PDDG GDYP LP RDP+YP+D+P R NY EP+ D I G + +
Sbjct: 63 YPDDGLGYGDYPKLPFKGVALRDPYYPYDHPEHRRNYDEPVHIDINI--LGEDRYDAGAS 120
Query: 123 QRISVWEQLAYMVGILGTI 141
R S + + I GT+
Sbjct: 121 DRYSNKVMVTSFLLIFGTL 139
>gi|291404650|ref|XP_002718698.1| PREDICTED: NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8
[Oryctolagus cuniculus]
Length = 186
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 52/86 (60%)
Query: 18 SLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLP 77
S+ RTA T D LPG PKT EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 20 SVMPLGARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLP 79
Query: 78 HTHYDSRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD+ R N+GEPL
Sbjct: 80 DHSQQERDPWYDWDHSDLRLNWGEPL 105
>gi|194381424|dbj|BAG58666.1| unnamed protein product [Homo sapiens]
Length = 172
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 49/81 (60%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD P R N+GEP+
Sbjct: 85 ERDPWYSWDQPGLRLNWGEPM 105
>gi|395828272|ref|XP_003787309.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial [Otolemur garnettii]
Length = 189
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Query: 4 LRVLSQVKSLGKVV-SLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV 62
LRVL V+ L + ++ RTA T D LPG P+T EER AAKKYN+ E+YE
Sbjct: 9 LRVLG-VRWLQRAARNVGPLGARTASHMTKDMLPGAYPRTPEERAAAAKKYNMRVEDYEP 67
Query: 63 QPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PDDG GDYP LP+ RDP+Y WD+ R N+GEP+ D +
Sbjct: 68 YPDDGMGYGDYPKLPNRSQHERDPWYDWDHSDLRLNWGEPIHWDLDM 114
>gi|12845434|dbj|BAB26749.1| unnamed protein product [Mus musculus]
Length = 186
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT 70
++ VV L+ R AF T D LPG P+T EER AAKKYN+ E+YE PDDG
Sbjct: 16 RTTRGVVPLE---ARRAFHMTKDMLPGSYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGY 72
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
GDYP LP+ RDP+Y WD+ R N+GEP+ D +
Sbjct: 73 GDYPMLPNRSQHERDPWYQWDHSELRMNWGEPVHWDLDM 111
>gi|345311783|ref|XP_001514991.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like, partial [Ornithorhynchus
anatinus]
Length = 132
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 53/79 (67%)
Query: 31 TPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPW 90
T D LPG P+T EER AAKKYN+L E+Y+ PDDG GDYP LP+ RDP+Y W
Sbjct: 9 TKDMLPGPYPRTPEERAAAAKKYNMLVEDYKPYPDDGMGYGDYPMLPNRSQHERDPWYEW 68
Query: 91 DYPMFRTNYGEPLPNDFAI 109
D+P R N+GEP+ DF +
Sbjct: 69 DHPDLRLNWGEPMHWDFDM 87
>gi|221554507|ref|NP_001138336.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial precursor [Pan troglodytes]
gi|397510267|ref|XP_003825521.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial [Pan paniscus]
gi|115502325|sp|Q0MQE7.1|NDUB8_PANTR RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial; AltName: Full=Complex I-ASHI;
Short=CI-ASHI; AltName: Full=NADH-ubiquinone
oxidoreductase ASHI subunit; Flags: Precursor
gi|111662039|gb|ABH12196.1| mitochondrial complex I subunit NDUFB8 [Pan troglodytes]
gi|410255506|gb|JAA15720.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa [Pan
troglodytes]
Length = 186
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMG-FNEQPVNQRISVWEQLAYMVGILGTI 141
RDP+Y WD P R N+GEP+ H+ + +N V+ + + + G +
Sbjct: 85 ERDPWYSWDQPGLRLNWGEPM-------HWHLDMYNRNRVDTSPTPLSWHVMCMQLFGFL 137
Query: 142 SLVLKYFCW 150
+ ++ + CW
Sbjct: 138 AFMI-FMCW 145
>gi|209736810|gb|ACI69274.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Salmo salar]
Length = 188
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 2 NKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
N R LS+ K G Q VR A + LPG PKT EER AAKKYN+ E+YE
Sbjct: 8 NWARALSKEKQPGFSALFSQ--VRAASGPSKGMLPGPYPKTPEERAAAAKKYNMRVEDYE 65
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD+G GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 66 PIPDNGEGYGDYPLLPDRSQHERDPWYSWDHPDLRRNWGEPIHWDFDM 113
>gi|241623488|ref|XP_002409125.1| NADH-ubiquinone oxidoreductase ashi subunit, putative [Ixodes
scapularis]
gi|215503119|gb|EEC12613.1| NADH-ubiquinone oxidoreductase ashi subunit, putative [Ixodes
scapularis]
Length = 179
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT-GDYPHLPHTHY 81
+ RTA + DW PG P+T EER AAKKY LLPE+YE PD+ ++ GDYP+LP
Sbjct: 23 ATRTAHYWNKDWKPGPYPQTPEERAAAAKKYGLLPEDYEPFPDNHDSSRGDYPNLPDIGA 82
Query: 82 DSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQ-RISVWEQLAYMVGILGT 140
RDP +D+P R NYGEP+ + M ++ ++ W+QL +G++
Sbjct: 83 TERDPEESYDFPYLRRNYGEPM----HLYAEAMTLERMDTSRMKVPFWKQLVSFLGVVIG 138
Query: 141 ISLVLKYFCWEKRYYYPKFDSPKYQ----KGVVHYGY 173
+ +K F EK P+++ VVHY +
Sbjct: 139 YFVAVKVFDHEKLQCGMNPPVPRWELPMGGSVVHYTF 175
>gi|209737530|gb|ACI69634.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Salmo salar]
Length = 188
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 2 NKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
N R LS+ K G Q VR A + LPG PKT EER AAKKYN+ E+YE
Sbjct: 8 NWARALSKGKQPGFSALFSQ--VRAASGPSKGMLPGPYPKTPEERAAAAKKYNMRVEDYE 65
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD+G GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 66 PIPDNGEGYGDYPLLPDRSQHERDPWYSWDHPDLRRNWGEPIHWDFDM 113
>gi|209735040|gb|ACI68389.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Salmo salar]
Length = 195
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 2 NKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
N R LS+ K G Q VR A + LPG PKT EER AAKKYN+ E+YE
Sbjct: 15 NWARALSKGKQPGFSALFSQ--VRAASGPSKGMLPGPYPKTPEERAAAAKKYNMRVEDYE 72
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD+G GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 73 PIPDNGEGYGDYPLLPDRSQHERDPWYSWDHPDLRRNWGEPIHWDFDM 120
>gi|332212565|ref|XP_003255390.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial [Nomascus leucogenys]
gi|332212567|ref|XP_003255391.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial [Nomascus leucogenys]
gi|441600338|ref|XP_004087604.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial [Nomascus leucogenys]
Length = 186
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMG-FNEQPVNQRISVWEQLAYMVGILGTI 141
RDP+Y WD P R N+GEP+ H+ + +N V+ + + ++G +
Sbjct: 85 ERDPWYSWDQPDLRLNWGEPM-------HWHLDMYNRNRVDTSPTPVSWHVMCMQLVGFL 137
Query: 142 SLVLKYFCW 150
+ ++ + CW
Sbjct: 138 AFMI-FMCW 145
>gi|426365890|ref|XP_004049999.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial [Gorilla gorilla gorilla]
gi|426365892|ref|XP_004050000.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial [Gorilla gorilla gorilla]
gi|115502324|sp|Q0MQE6.1|NDUB8_GORGO RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial; AltName: Full=Complex I-ASHI;
Short=CI-ASHI; AltName: Full=NADH-ubiquinone
oxidoreductase ASHI subunit; Flags: Precursor
gi|111662041|gb|ABH12197.1| mitochondrial complex I subunit NDUFB8 [Gorilla gorilla]
Length = 186
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 6 VLSQVKSLGKVVSLQQNS-------VRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPE 58
+++ + LG V LQ+ S RTA T D PG P+T EER AAKKYN+ E
Sbjct: 2 AVARARVLG-VQWLQRASRNVMPLGARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVE 60
Query: 59 EYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMG-FN 117
+YE PDDG GDYP LP RDP+Y WD P R N+GEP+ H+ + +N
Sbjct: 61 DYEPYPDDGMGYGDYPKLPDRSQHERDPWYSWDQPGLRLNWGEPM-------HWHLDMYN 113
Query: 118 EQPVNQRISVWEQLAYMVGILGTISLVLKYFCW 150
V+ + + + G ++ ++ + CW
Sbjct: 114 RNRVDTSPTPISWHVMCMQLFGFLAFMI-FMCW 145
>gi|344274839|ref|XP_003409222.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Loxodonta africana]
Length = 186
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 52/87 (59%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG P+T EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GTRTASHITKDMLPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQQ 84
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAI 109
RDP+Y WD+ R N+GEPL D +
Sbjct: 85 ERDPWYQWDHSDLRVNWGEPLHWDLDM 111
>gi|297493882|gb|ADI40663.1| NADH dehydrogenase 1 beta subcomplex 8 [Cynopterus sphinx]
Length = 152
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 50/81 (61%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
R A T D LPG PKT EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 8 GARAASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPARSQH 67
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD+P R N+GEP+
Sbjct: 68 ERDPWYDWDHPDLRLNWGEPI 88
>gi|269969382|sp|P0CB86.1|NDUB8_PONPY RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial; AltName: Full=Complex I-ASHI;
Short=CI-ASHI; AltName: Full=NADH-ubiquinone
oxidoreductase ASHI subunit; Flags: Precursor
gi|111662043|gb|ABH12198.1| mitochondrial complex I subunit NDUFB8 [Pongo pygmaeus]
Length = 186
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMG-FNEQPVNQRISVWEQLAYMVGILGTI 141
RDP+Y WD P R N+GEP+ H+ + FN V+ + + G +
Sbjct: 85 ERDPWYSWDQPDLRLNWGEPM-------HWHLDMFNRNRVDTSPIPVSWNVMCMQLFGFL 137
Query: 142 SLVLKYFCWEKRYY 155
+ ++ + CW Y
Sbjct: 138 AFMI-FMCWVGEVY 150
>gi|4689104|gb|AAD27761.1|AF077028_1 NADH-ubiquinone oxidoreductase ASHI subunit precursor [Homo
sapiens]
Length = 186
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMG-FNEQPVNQRISVWEQLAYMVGILGTI 141
RDP+Y WD P R N+GEP+ H+ + +N V+ + + + G +
Sbjct: 85 ERDPWYSWDQPGLRLNWGEPM-------HWHLDMYNRNRVDTSPTPVSWHVMCMQLFGFL 137
Query: 142 SLVLKYFCW 150
+ ++ + CW
Sbjct: 138 AFMI-FMCW 145
>gi|403259714|ref|XP_003922347.1| PREDICTED: protein transport protein Sec31B [Saimiri boliviensis
boliviensis]
Length = 1353
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 24 VRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDS 83
R AF D LPG PKT EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 26 ARRAFHLKKDELPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHE 85
Query: 84 RDPFYPWDYPMFRTNYGEPLPNDFAI-SHYGMGFNEQPVNQRISVWEQLAYMVGIL 138
RDP+Y WD P R N+GE + D + + + + P++ + +W+QL V +
Sbjct: 86 RDPWYDWDQPDLRVNWGETMHWDIDMYNRNRVDTSPTPISWDV-MWKQLLSFVAFM 140
>gi|4826854|ref|NP_004995.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial precursor [Homo sapiens]
gi|6093490|sp|O95169.1|NDUB8_HUMAN RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial; AltName: Full=Complex I-ASHI;
Short=CI-ASHI; AltName: Full=NADH-ubiquinone
oxidoreductase ASHI subunit; Flags: Precursor
gi|33150722|gb|AAP97239.1|AF115968_1 NADH:ubiquinone oxidoreductase ASHI subunit [Homo sapiens]
gi|4164448|gb|AAD05422.1| NADH:ubiquinone oxidoreductase ASHI subunit [Homo sapiens]
gi|12653393|gb|AAH00466.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa [Homo
sapiens]
gi|17939465|gb|AAH19276.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa [Homo
sapiens]
gi|119570205|gb|EAW49820.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa,
isoform CRA_b [Homo sapiens]
gi|123993221|gb|ABM84212.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa
[synthetic construct]
gi|124000217|gb|ABM87617.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa
[synthetic construct]
gi|158260181|dbj|BAF82268.1| unnamed protein product [Homo sapiens]
Length = 186
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 49/81 (60%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD P R N+GEP+
Sbjct: 85 ERDPWYSWDQPGLRLNWGEPM 105
>gi|57107249|ref|XP_534992.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial isoform 1 [Canis lupus
familiaris]
Length = 186
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 52/87 (59%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG PKT EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQQ 84
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAI 109
RDP+Y WD+ R N+GEP+ D +
Sbjct: 85 ERDPWYNWDHSDLRLNWGEPMHWDLDM 111
>gi|339522149|gb|AEJ84239.1| mitochondrial NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8 [Capra hircus]
Length = 186
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 49/81 (60%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG PKT EER A KKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHITKDMLPGPYPKTPEERAAAGKKYNMRGEDYEPYPDDGMGYGDYPKLPDRSQQ 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
R P+Y WD+P R N+GEP+
Sbjct: 85 ERGPWYDWDHPDLRVNWGEPM 105
>gi|388452915|ref|NP_001252695.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Macaca mulatta]
gi|387542876|gb|AFJ72065.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial precursor [Macaca mulatta]
Length = 186
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 50/81 (61%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG P+T EER AAKKYN+ E+YE PD+G GDYP LP
Sbjct: 25 GARTASRMTKDMLPGPYPRTPEERAAAAKKYNMRVEDYEPYPDEGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD P R N+GEP+
Sbjct: 85 ERDPWYSWDQPDLRLNWGEPM 105
>gi|194896382|ref|XP_001978468.1| GG17665 [Drosophila erecta]
gi|190650117|gb|EDV47395.1| GG17665 [Drosophila erecta]
Length = 175
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Query: 18 SLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHL- 76
++ + ++R+ + D+ PG P+TE+ER AAKKY LLPEEY+ DDG GDYP +
Sbjct: 20 AVARQAIRSMAGWNKDYKPGPYPQTEKERLAAAKKYYLLPEEYKPYADDGLGYGDYPKVG 79
Query: 77 PHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVG 136
+++D +YPWDYP + N+ EP+ D + +P + S Y V
Sbjct: 80 GGLGVEAKDSYYPWDYPEHKRNHHEPISADHDLYSEDRWSQAEPPRYKNSY-----YFVC 134
Query: 137 ILGTISLVLKYFCW--EKRYYYPKFDSPKYQKGVVHYGYHQ 175
LG +S L + W +K+ Y P GV HY + +
Sbjct: 135 FLGVMSGCLALYYWLDDKKMYRPVAAKQYPSDGVKHYTFEK 175
>gi|392877292|gb|AFM87478.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Callorhinchus milii]
Length = 188
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 5 RVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQP 64
RV ++S ++ R A + D LPG P+T EER AAKKYN+ E+YE P
Sbjct: 14 RVFGGLRS-----AVSHGQARAASGLSEDMLPGPYPRTPEERAVAAKKYNMRVEDYEPYP 68
Query: 65 DDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
DDG GDYP L RDP+Y WD P R N+GEP+ DF +
Sbjct: 69 DDGMGFGDYPKLSDRSQQERDPWYKWDAPDLRRNWGEPMHWDFDM 113
>gi|195397267|ref|XP_002057250.1| GJ16452 [Drosophila virilis]
gi|194147017|gb|EDW62736.1| GJ16452 [Drosophila virilis]
Length = 175
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 4 LRVLSQVKSLGKVV-SLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV 62
++ L K L V +LQ + VR + D+ PG PKT++ER AAKKY LLPEEY+
Sbjct: 5 MKSLCLAKKLNAVNPALQAHIVRNLAGWNKDYKPGPYPKTDKEREAAAKKYYLLPEEYKP 64
Query: 63 QPDDGFATGDYPHL-PHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPV 121
D+G GDYP + +++D +YP+DYP + N+ EP+ D + Y QP
Sbjct: 65 YADNGLGFGDYPKVGGGLGIENKDNYYPYDYPEHKRNFNEPISADHDL--YSEDRYSQPD 122
Query: 122 NQRISVWEQLAYMVGILGTISLVLKYFCWEKRYYYPKFDSPKYQKGVVHYGYHQ 175
R S +G++ T L L Y+ +K+ Y P GV HY + +
Sbjct: 123 VPRYSGAYYFTCFLGVM-TGCLALYYWLEDKKMYRPVAAKQYPADGVKHYTFER 175
>gi|170031329|ref|XP_001843538.1| NADH-ubiquinone oxidoreductase ashi subunit [Culex
quinquefasciatus]
gi|167869798|gb|EDS33181.1| NADH-ubiquinone oxidoreductase ashi subunit [Culex
quinquefasciatus]
Length = 174
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 MNKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEY 60
+ L++ SQ++S K +L +VR A + D+ P + P+T++ER AA+KY L P EY
Sbjct: 5 IKGLKLASQIQS--KNPALFALAVRNAHGWNKDFKPAKFPETDKEREAAARKYGLHPAEY 62
Query: 61 EVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQP 120
+ P+DG GDYP L T ++RDP+YP+D+P + N EPL + + G N
Sbjct: 63 QPYPNDGLGYGDYPKLADTPVEARDPYYPYDFPELKRNLHEPLHAESDL----WGENMYG 118
Query: 121 VNQRISVWEQLAYMVGILGTISLVLKYFCWEKRY-YYPKFDSPKYQKGVVHYGYHQK 176
+R + + Y + LG ++ L + W + Y + + +Y + HY + K
Sbjct: 119 SAER-TRYPMRTYWLAFLGVMAGCLGLYYWLEDYKMFRPVLAKQYARDGKHYTFDSK 174
>gi|209736264|gb|ACI69001.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Salmo salar]
Length = 188
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 5 RVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQP 64
R LS+ K G Q VR A + LPG PKT EER AAKKYN+ E+YE P
Sbjct: 11 RALSKGKQPGFSALFSQ--VRAASGPSKGMLPGPYPKTPEERAAAAKKYNMRVEDYEPIP 68
Query: 65 DDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
D+G GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 69 DNGEGYGDYPLLPDRSQHERDPWYSWDHPDLRRNWGEPIHWDFDM 113
>gi|387914706|gb|AFK10962.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Callorhinchus milii]
gi|392880990|gb|AFM89327.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Callorhinchus milii]
gi|392884356|gb|AFM91010.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Callorhinchus milii]
Length = 188
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 5 RVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQP 64
RV ++S ++ R A + D LPG P+T EER AAKKYN+ E+YE P
Sbjct: 14 RVFGGLRS-----AVSHGQARAASGLSEDMLPGPYPRTPEERAVAAKKYNMRVEDYEPYP 68
Query: 65 DDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
DDG GDYP L RDP+Y WD P R N+GEP+ DF +
Sbjct: 69 DDGMGFGDYPKLSDRSQQERDPWYKWDAPDLRRNWGEPMHWDFDM 113
>gi|209733130|gb|ACI67434.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Salmo salar]
Length = 188
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Query: 2 NKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
N R LS+ K G Q VR A + LPG PKT EER AAKKYN+ E+YE
Sbjct: 8 NWARALSKGKQPGFSALFSQ--VRAASGPSKGMLPGPYPKTPEERAAAAKKYNMRVEDYE 65
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPV 121
PD+G GDYP LP RDP++ WD+P R N+GEP+ DF + F V
Sbjct: 66 PIPDNGEGYGDYPLLPDRSQHERDPWHSWDHPDLRRNWGEPIHWDFDM------FIRNRV 119
Query: 122 NQRISVWEQLAYMVGILGTISLVLKYF 148
+ S + A + G + +L F
Sbjct: 120 DTSPSPVDWHAMCKHLFGFVGFMLLMF 146
>gi|395502259|ref|XP_003755499.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial [Sarcophilus harrisii]
Length = 186
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 4 LRVLSQVKSLGKVVSLQQN-SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV 62
+ V ++ LG R A + D LPG P+T EER AAKKYN+ E+YE
Sbjct: 5 MAVSRTIRWLGTAARRAAPLGARAASGLSKDMLPGPYPRTPEERAAAAKKYNMRVEDYEP 64
Query: 63 QPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD+GF GDYP LP RDP+Y WD+ R N+GEP+ DF +
Sbjct: 65 YPDEGFGYGDYPKLPDRSQHERDPWYNWDHSELRLNWGEPMHFDFDM 111
>gi|431838901|gb|ELK00830.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Pteropus alecto]
Length = 186
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 52/87 (59%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG PKT EE AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHITKDMLPGPYPKTPEEWAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPARSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAI 109
RDP+Y WD+P R N+GEP+ D +
Sbjct: 85 ERDPWYDWDHPDLRLNWGEPIHWDLDM 111
>gi|126273595|ref|XP_001363738.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Monodelphis domestica]
Length = 186
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 52/87 (59%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
R A + D LPG P+T EER AAKKYN+ E+YE PDDGF GDYP LP
Sbjct: 25 GTRAASGLSKDMLPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGFGFGDYPKLPERSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAI 109
RDP+Y WD+ R N+GEP+ D +
Sbjct: 85 ERDPWYDWDHSELRLNWGEPMHFDLDM 111
>gi|296470664|tpg|DAA12779.1| TPA: NADH dehydrogenase-like [Bos taurus]
Length = 186
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT 70
K+ VV L RTA T D LPG PKT EER AAKKYN+ E+YE PDDG
Sbjct: 16 KAAQNVVPL---GARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGY 72
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGE 101
GDYP LP RDP+Y WD+P + N+GE
Sbjct: 73 GDYPKLPDRSQQERDPWYDWDHPDLQLNWGE 103
>gi|442751087|gb|JAA67703.1| Putative nadh:ubiquinone oxidoreductase ndufb8/ashi subunit [Ixodes
ricinus]
Length = 179
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 12/158 (7%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT-GDYPHLPHTHY 81
+ RTA + DW PG P+T +ER AAKKY LLPE+YE PD+ ++ GDYP+LP
Sbjct: 23 ATRTAHYWNKDWKPGPYPQTPQERAAAAKKYGLLPEDYEPFPDNHDSSRGDYPNLPDITA 82
Query: 82 DSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISV--WEQLAYMVGILG 139
RDP +D+P R NYGEP+ + M E+ N R+ V W+QL +G++
Sbjct: 83 TERDPEESYDFPYLRRNYGEPM----HLYAEAMTL-ERMDNSRMKVPLWKQLVSFLGVVF 137
Query: 140 TISLVLKYFCWEKRYYYPKFDSPKYQ----KGVVHYGY 173
+ L ++ EK + P+++ VVHY +
Sbjct: 138 GMFLGVQICDHEKLRFGMNPPVPRWELPMGGSVVHYTF 175
>gi|209737446|gb|ACI69592.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Salmo salar]
Length = 195
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 2 NKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
N + LS+ K G Q VR A + LPG PKT EER AAKKYN+ E+YE
Sbjct: 15 NWAQALSKGKQPGFSALFSQ--VRAASGPSKGMLPGPYPKTPEERAAAAKKYNMRVEDYE 72
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD+G GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 73 PIPDNGEGYGDYPLLPDRSQHERDPWYSWDHPDLRRNWGEPIHWDFDM 120
>gi|194764137|ref|XP_001964188.1| GF20848 [Drosophila ananassae]
gi|190619113|gb|EDV34637.1| GF20848 [Drosophila ananassae]
Length = 177
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
Query: 18 SLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLP 77
+L + +VR+ + D+ P PKTE+ER AAKKY LLPEEY+ DDG GDYP +
Sbjct: 20 ALARQAVRSMAGWNKDFKPAPFPKTEKERLAAAKKYYLLPEEYKPYADDGLGYGDYPKVG 79
Query: 78 H-THYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVG 136
+ +++D +YPWDYP + N EP+ + + +P + S Y V
Sbjct: 80 YGLGVEAKDNYYPWDYPEHKRNLHEPISANHDLYSEDRYSQAEPPRYKNSY-----YFVC 134
Query: 137 ILGTISLVLKYFCW--EKRYYYPKFDSPKYQKGVVHYGYHQ 175
LG +S L + W +K+ Y P + +GV HY + +
Sbjct: 135 FLGVMSGCLALYYWLEDKKMYRPVAEKQYPAEGVKHYTFER 175
>gi|225703486|gb|ACO07589.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Oncorhynchus mykiss]
Length = 188
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 2 NKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
N R LS+ K G Q +R A + LPG P+T EER AAK+YN+ E+YE
Sbjct: 8 NWARALSRGKQPGFSALFSQ--IRAASGPSKGMLPGPYPQTPEERAAAAKEYNMRVEDYE 65
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD+G GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 66 PIPDNGEGYGDYPQLPDRSQHERDPWYSWDHPDLRRNWGEPIHWDFDM 113
>gi|383854150|ref|XP_003702585.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Megachile rotundata]
Length = 183
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 6/139 (4%)
Query: 35 LPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPM 94
+P + P+TEEERRK+A KY L P EYE P+D GDYP LP +RDP+YPWDYP+
Sbjct: 47 MPDDYPETEEERRKSAAKYGLHPYEYEPYPNDHRYLGDYPQLPWIGVVARDPYYPWDYPV 106
Query: 95 FRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLVLKYFCWEKRY 154
R NYG+P+ + + MG + R V + ++ + TI + + +
Sbjct: 107 IRRNYGDPIHPEQDM----MGEDRYDYGVRQLVSDTTGALI-FIATIGVFYLAYKFSSHT 161
Query: 155 YYPKFDSPKYQKGVVHYGY 173
+P+ + +Y + VHY +
Sbjct: 162 SFPRMEK-QYPRNGVHYSF 179
>gi|260908648|gb|ACX54043.1| NADH ubiquinone oxidoreductase ashi subunit [Rhipicephalus
sanguineus]
Length = 172
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 13/159 (8%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPD-DGFATGDYPHLPHTHY 81
S R+A + DW PG PKTEEE R AAKKY +L E+Y+V+ + +G GDYP +P
Sbjct: 17 SCRSAGYWNKDWRPGPTPKTEEEMRAAAKKYKMLYEDYKVRAESEGLTWGDYPKIPTVTA 76
Query: 82 DSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQ---RISVWEQLAYMVGIL 138
SRDP +D+P + NYGEP ++ Y + + ++ ++ + +Q+A +G++
Sbjct: 77 GSRDPEEDYDFPTLKRNYGEP------VNIYMDAYTPERLDLKRYKVPIRKQIAQFLGVV 130
Query: 139 GTISLVLKYFCW-EKRYYYPKFDSPKY--QKGVVHYGYH 174
+ ++ +F E + Y D P GVVHY +
Sbjct: 131 LGLWYLMDFFSRPELAFQYSINDIPVQMPNDGVVHYTFE 169
>gi|355783027|gb|EHH64948.1| hypothetical protein EGM_18282 [Macaca fascicularis]
Length = 186
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 50/81 (61%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG P+T EER AAKKYN+ E+YE PD+G GDYP LP
Sbjct: 25 GARTASHMTKDMLPGPYPRTPEERADAAKKYNMRMEDYEPYPDEGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD P R N+GEP+
Sbjct: 85 ERDPWYSWDQPDLRLNWGEPM 105
>gi|410975902|ref|XP_003994366.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial [Felis catus]
Length = 186
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 52/87 (59%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D LPG PKT EER AAKKYN+ E+Y+ PDDG GDYP LP
Sbjct: 25 GARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYQPYPDDGMGYGDYPKLPDRSQQ 84
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAI 109
RDP+Y WD+ R N+GEP+ D +
Sbjct: 85 ERDPWYDWDHQDLRLNWGEPMHWDLDM 111
>gi|209738536|gb|ACI70137.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Salmo salar]
Length = 188
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 2 NKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
N R LS+ K G Q VR A + LPG PKT EER AAKKYN+ E+YE
Sbjct: 8 NWARALSKGKQPGFSALFSQ--VRAASGPSKGMLPGPYPKTPEERAAAAKKYNMRVEDYE 65
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD+G GDYP LP RDP+Y WD+P R ++GEP+ DF +
Sbjct: 66 PIPDNGEGYGDYPLLPDRSQHERDPWYSWDHPDLRRSWGEPIHWDFDM 113
>gi|432924524|ref|XP_004080603.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Oryzias latipes]
Length = 171
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 50/75 (66%)
Query: 35 LPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPM 94
LPG PKT EER AAKKYN+ E+YE PD+G GDYP LP RDP+Y WD+P
Sbjct: 22 LPGAYPKTPEERAAAAKKYNMRVEDYEPFPDNGEGFGDYPKLPERSQHERDPWYKWDHPD 81
Query: 95 FRTNYGEPLPNDFAI 109
R N+GEP+P DF +
Sbjct: 82 LRRNWGEPIPWDFDM 96
>gi|5262459|emb|CAB45691.1| hypothetical protein [Homo sapiens]
gi|49065406|emb|CAG38521.1| NDUFB8 [Homo sapiens]
gi|190689565|gb|ACE86557.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa protein
[synthetic construct]
gi|190690929|gb|ACE87239.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa protein
[synthetic construct]
Length = 186
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 48/81 (59%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+ EER AAKKYN+ E+YE PDDG GDYP LP
Sbjct: 25 GARTASHMTKDMFPGPYPRIPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD P R N+GEP+
Sbjct: 85 ERDPWYSWDQPGLRLNWGEPM 105
>gi|410351297|gb|JAA42252.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa [Pan
troglodytes]
Length = 232
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PDDG GD P LP
Sbjct: 71 GARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDSPKLPDRSQH 130
Query: 83 SRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMG-FNEQPVNQRISVWEQLAYMVGILGTI 141
RDP+Y WD P R N+GEP+ H+ + +N V+ + + + G +
Sbjct: 131 ERDPWYSWDQPGLRLNWGEPM-------HWHLDMYNRNRVDTSPTPLSWHVMCMQLFGFL 183
Query: 142 SLVLKYFCW 150
+ ++ + CW
Sbjct: 184 AFMI-FMCW 191
>gi|355558449|gb|EHH15229.1| hypothetical protein EGK_01290 [Macaca mulatta]
Length = 186
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 49/81 (60%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PD+G GDYP LP
Sbjct: 25 GARTASRMTKDMFPGPYPRTPEERADAAKKYNMRMEDYEPYPDEGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD P R N+GEP+
Sbjct: 85 ERDPWYSWDQPDLRLNWGEPM 105
>gi|256818843|gb|ACV31091.1| RE31024p [Drosophila melanogaster]
Length = 194
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 3 KLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV 62
K L+Q V +Q ++R+ + D+ PG P+TE+ER AAKKY LLPEEY+
Sbjct: 25 KTVCLAQKLCAANPVVARQ-AIRSMAGWNKDYKPGPYPQTEKERLAAAKKYYLLPEEYKP 83
Query: 63 QPDDGFATGDYPHLPH-THYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPV 121
DDG GDYP L + +++D +YPWDYP + N EP+ D + +P
Sbjct: 84 YADDGLGYGDYPKLGYGLGVEAKDSYYPWDYPEHKRNQHEPISADHDLYSEDRWSQAEPP 143
Query: 122 NQRISVWEQLAYMVGILGTISLVLKYFCW--EKRYYYPKFDSPKYQKGVVHYGYHQ 175
+ Y LG +S L + W +K+ Y P GV HY + +
Sbjct: 144 R-----YSNAYYFACFLGVMSGCLALYYWLDDKKMYRPVAAKQYPSPGVKHYTFEK 194
>gi|24640175|ref|NP_572338.1| CG3192, isoform A [Drosophila melanogaster]
gi|78706494|ref|NP_001027048.1| CG3192, isoform B [Drosophila melanogaster]
gi|7290739|gb|AAF46185.1| CG3192, isoform A [Drosophila melanogaster]
gi|71854512|gb|AAZ52496.1| CG3192, isoform B [Drosophila melanogaster]
gi|281183423|gb|ADA53580.1| LD32677p [Drosophila melanogaster]
Length = 175
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 3 KLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV 62
K L+Q V +Q ++R+ + D+ PG P+TE+ER AAKKY LLPEEY+
Sbjct: 6 KTVCLAQKLCAANPVVARQ-AIRSMAGWNKDYKPGPYPQTEKERLAAAKKYYLLPEEYKP 64
Query: 63 QPDDGFATGDYPHLPH-THYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPV 121
DDG GDYP L + +++D +YPWDYP + N EP+ D + +P
Sbjct: 65 YADDGLGYGDYPKLGYGLGVEAKDSYYPWDYPEHKRNQHEPISADHDLYSEDRWSQAEPP 124
Query: 122 NQRISVWEQLAYMVGILGTISLVLKYFCW--EKRYYYPKFDSPKYQKGVVHYGYHQ 175
+ Y LG +S L + W +K+ Y P GV HY + +
Sbjct: 125 R-----YSNAYYFACFLGVMSGCLALYYWLDDKKMYRPVAAKQYPSPGVKHYTFEK 175
>gi|262051029|gb|ACY07075.1| RE10478p [Drosophila melanogaster]
Length = 186
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 3 KLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV 62
K L+Q V +Q ++R+ + D+ PG P+TE+ER AAKKY LLPEEY+
Sbjct: 17 KTVCLAQKLCAANPVVARQ-AIRSMAGWNKDYKPGPYPQTEKERLAAAKKYYLLPEEYKP 75
Query: 63 QPDDGFATGDYPHLPH-THYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPV 121
DDG GDYP L + +++D +YPWDYP + N EP+ D + +P
Sbjct: 76 YADDGLGYGDYPKLGYGLGVEAKDSYYPWDYPEHKRNQHEPISADHDLYSEDRWSQAEPP 135
Query: 122 NQRISVWEQLAYMVGILGTISLVLKYFCW--EKRYYYPKFDSPKYQKGVVHYGYHQ 175
+ Y LG +S L + W +K+ Y P GV HY + +
Sbjct: 136 R-----YSNTYYFACFLGVMSGCLALYYWLDDKKMYRPVAAKQYPSPGVKHYTFEK 186
>gi|348578647|ref|XP_003475094.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Cavia porcellus]
Length = 186
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 6 VLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPD 65
V QV LG RTA T D LPG P+T EER AAKKYN+ E+YE PD
Sbjct: 17 VARQVVPLG---------ARTASHMTKDMLPGPYPRTPEERAAAAKKYNMRVEDYEPYPD 67
Query: 66 DGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPL 103
+G GDYP LP RDP+Y WD+ R N+GEP+
Sbjct: 68 EGMGYGDYPKLPDRSQSERDPWYEWDHSDLRLNWGEPI 105
>gi|195469998|ref|XP_002099922.1| GE16455 [Drosophila yakuba]
gi|194187446|gb|EDX01030.1| GE16455 [Drosophila yakuba]
Length = 175
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 9/176 (5%)
Query: 3 KLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV 62
K L+Q K ++ + ++R+ + D+ PG P+TE+ER AAKKY LLPEEY+
Sbjct: 6 KTVCLAQ-KLCAANPAVARQAIRSMAGWNKDYKPGPYPQTEKERLAAAKKYYLLPEEYKP 64
Query: 63 QPDDGFATGDYPHL-PHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPV 121
DDG GDYP +++D +YPWDYP + N+ EP+ D + +P
Sbjct: 65 YADDGLGYGDYPKTGGGLGVEAKDSYYPWDYPEHKRNHHEPISADHDLYSEDRWSQAEPP 124
Query: 122 NQRISVWEQLAYMVGILGTISLVLKYFCW--EKRYYYPKFDSPKYQKGVVHYGYHQ 175
+ Y V LG +S L + W +K+ Y P GV HY + +
Sbjct: 125 R-----YSNAYYFVCFLGVMSGCLALYYWLDDKKMYRPVAAKQYPSDGVKHYTFEK 175
>gi|355761485|gb|EHH61811.1| hypothetical protein EGM_19938 [Macaca fascicularis]
Length = 186
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 49/81 (60%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PD+G GDYP LP
Sbjct: 25 GARTASRMTKDMFPGPYPRTPEERADAAKKYNMRMEDYEPYPDEGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD P R N+GEP+
Sbjct: 85 ERDPWYSWDQPDLRLNWGEPM 105
>gi|209736278|gb|ACI69008.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Salmo salar]
Length = 195
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 2 NKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
N R LS+ K G Q VR A + LPG PKT EE AAKKYN+ E+YE
Sbjct: 15 NWARALSKGKQPGFSALFSQ--VRAASGPSKGMLPGPYPKTPEEGAAAAKKYNMRVEDYE 72
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD+G GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 73 PIPDNGEGYGDYPLLPDRSQHERDPWYSWDHPDLRRNWGEPIHWDFDM 120
>gi|355709945|gb|EHH31409.1| hypothetical protein EGK_12475 [Macaca mulatta]
Length = 186
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 49/81 (60%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA D LPG P+T EER AAKKYN+ E+YE PD+G GDYP LP
Sbjct: 25 GARTASRMPKDMLPGPYPRTPEERAAAAKKYNMRVEDYEPYPDEGMGYGDYPKLPDRSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD P R N+GEP+
Sbjct: 85 ERDPWYSWDQPDLRLNWGEPM 105
>gi|195340305|ref|XP_002036754.1| GM12565 [Drosophila sechellia]
gi|194130870|gb|EDW52913.1| GM12565 [Drosophila sechellia]
Length = 175
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 18 SLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHL- 76
++ + ++R+ + D+ PG P+TE+ER AAKKY LLPEEY+ DDG GDYP +
Sbjct: 20 AVARQAIRSMAGWNKDYKPGPYPQTEKERLAAAKKYYLLPEEYKPYADDGLGYGDYPKVG 79
Query: 77 PHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVG 136
+++D +YPWDYP + N EP+ D + +P+ + Y
Sbjct: 80 GGLGVEAKDSYYPWDYPEHKRNQHEPISADHDLYSEDRWSQAEPLR-----YSNAYYFAC 134
Query: 137 ILGTISLVLKYFCW--EKRYYYPKFDSPKYQKGVVHYGYHQ 175
LG +S L + W +K+ Y P GV HY + +
Sbjct: 135 FLGVMSGCLALYYWLDDKKMYRPVAAKQYPSPGVKHYTFEK 175
>gi|125982982|ref|XP_001355256.1| GA16565 [Drosophila pseudoobscura pseudoobscura]
gi|195168812|ref|XP_002025224.1| GL13370 [Drosophila persimilis]
gi|54643570|gb|EAL32313.1| GA16565 [Drosophila pseudoobscura pseudoobscura]
gi|194108680|gb|EDW30723.1| GL13370 [Drosophila persimilis]
gi|225581090|gb|ACN94665.1| GA16565 [Drosophila miranda]
Length = 175
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Query: 18 SLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHL- 76
+L VR+ + D+ P PKTE+ER AAKKY LLPEEY+ DDG GDYP +
Sbjct: 20 ALASQVVRSMAGWNKDYKPAPFPKTEKEREAAAKKYYLLPEEYKPYADDGLGYGDYPKVG 79
Query: 77 PHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVG 136
+++D +YPWDYP + N EP+ D + Y Q R S + VG
Sbjct: 80 GGLGVENKDSYYPWDYPEHKRNLHEPISADHDL--YSEDRYSQAEKPRYSTSYYVLSFVG 137
Query: 137 ILGTISLVLKYFCWEKRYYYPKFDSPKYQKGVVHYGYHQ 175
++ L L Y+ +K+ Y P GV HY + +
Sbjct: 138 VMSGC-LALYYWLEDKKMYRPVAAKQYPGDGVKHYTFEK 175
>gi|209731740|gb|ACI66739.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Salmo salar]
Length = 188
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 2 NKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
N R LS+ K G Q VR A + LPG PKT EER AAKKYN+ E+YE
Sbjct: 8 NWARALSKGKQPGFSALFSQ--VRAASGPSKGMLPGPYPKTPEERAAAAKKYNMRVEDYE 65
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD+G GDYP L RDP+Y WD+P R N+GEP+ DF +
Sbjct: 66 PIPDNGEGYGDYPLLLDRSQHERDPWYSWDHPDLRRNWGEPIHWDFDM 113
>gi|109129642|ref|XP_001111766.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like, partial [Macaca mulatta]
Length = 104
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 6 VLSQVKSLGKVVSLQQNS-------VRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPE 58
+++ + LG V LQ+ S RTA D LPG P+T EER AAKKYN+ E
Sbjct: 2 AVARARVLG-VQWLQRASRNVVPLGARTASRMPKDMLPGPYPRTPEERAAAAKKYNMRVE 60
Query: 59 EYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEP 102
+YE PD+G GDYP LP RDP+Y WD P R N+GEP
Sbjct: 61 DYEPYPDEGMGYGDYPKLPDRSQHERDPWYSWDQPDLRLNWGEP 104
>gi|225703860|gb|ACO07776.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Oncorhynchus mykiss]
Length = 201
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%)
Query: 22 NSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHY 81
+ +R A + LPG P+T EER AAKKYN+ E+YE PD+G GDYP LP
Sbjct: 39 SQIRAASGPSKGLLPGPYPQTPEERAAAAKKYNMRVEDYEPIPDNGEGYGDYPQLPDRSQ 98
Query: 82 DSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
RDP+Y WD+P R N+GEP+ DF +
Sbjct: 99 HERDPWYSWDHPDLRRNWGEPIHWDFDM 126
>gi|290563076|gb|ADD38932.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
[Lepeophtheirus salmonis]
Length = 188
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%)
Query: 34 WLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYP 93
W P PKTEEER KAA KY ++P++Y DDG GDYP L ++ DSR + WD+P
Sbjct: 47 WKPSPYPKTEEERIKAAYKYGMIPDDYVPIKDDGDGIGDYPDLGNSSMDSRSGYVAWDFP 106
Query: 94 MFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLVLKY 147
+ NYGEP+ DF + G ++ Q +++ ++ ++ I L+ +
Sbjct: 107 NLKRNYGEPIHIDFLHTMDFWGLDDTTPAQSSMIYKISCFLAYMMVCIFLMTAF 160
>gi|126331759|ref|XP_001371919.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Monodelphis domestica]
Length = 193
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 3 KLRVLSQVKSLGKVVS-LQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
K R+L ++ LG + R A + D PG P+T EER AAKKYN+ E+YE
Sbjct: 11 KERLLGGIRWLGAAAQQVIPLGARAASGLSKDMPPGPYPRTPEERTDAAKKYNMRVEDYE 70
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PDDGF GD P LP RDP+Y WD+ R N+GEP+ D +
Sbjct: 71 PYPDDGFRFGDSPKLPERSQHERDPWYDWDHSELRLNWGEPMHFDLDM 118
>gi|72055604|ref|XP_796479.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Strongylocentrotus
purpuratus]
Length = 190
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Query: 35 LPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPM 94
LPG P+T EER AAKKY + E+YE DDG+ GDYP L H D RDP WD+P
Sbjct: 33 LPGPYPETPEERAAAAKKYGMRVEDYEPYADDGWGWGDYPKLKKQHADDRDPHGDWDFPE 92
Query: 95 FRTNYGEPL--PNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLV 144
R N+GE + D + + + N++I +W+Q + GIL T++ +
Sbjct: 93 DRRNWGEVMHIEQDLFVRQRPNAYKQ---NRKIPLWKQSMILGGILTTLATL 141
>gi|195047609|ref|XP_001992376.1| GH24238 [Drosophila grimshawi]
gi|193893217|gb|EDV92083.1| GH24238 [Drosophila grimshawi]
Length = 175
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 1 MNKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEY 60
M L + ++ + +SLQ R + D+ P P+TE+ER AAKKY LLPEEY
Sbjct: 5 MKSLCLAKKLSASNPALSLQ--IARNLAGWNKDYKPAPYPRTEKEREAAAKKYYLLPEEY 62
Query: 61 EVQPDDGFATGDYPHL-PHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQ 119
+ D+G GDYPH+ +++D +YP+DYP + N EP+ D I Y Q
Sbjct: 63 KPYADNGLGFGDYPHVGGGLGLENKDSYYPYDYPEHKRNLHEPISAD--IDLYSEDRFSQ 120
Query: 120 PVNQRISVWEQLAYMVGILGTISLVLKYFCW--EKRYYYPKFDSPKYQKGVVHYGYHQ 175
P R S Y + LG +S L + W +K+ Y P G HY + Q
Sbjct: 121 PDQPRYSTS---YYFLCFLGVMSGCLAVYYWLEDKKMYRPVAVKQLPADGKKHYTFDQ 175
>gi|195565466|ref|XP_002106320.1| GD16186 [Drosophila simulans]
gi|194203696|gb|EDX17272.1| GD16186 [Drosophila simulans]
Length = 175
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 3 KLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV 62
K L+Q V +Q ++R+ + D+ PG P+TE+ER AAKKY LLPEEY+
Sbjct: 6 KTVCLAQKLCAANPVVARQ-AIRSMAGWNKDYKPGPYPQTEKERLAAAKKYYLLPEEYKP 64
Query: 63 QPDDGFATGDYPHL-PHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPV 121
DDG GDYP + +++D +YPWDYP + N EP+ D + +P
Sbjct: 65 YADDGLGYGDYPKVGGGLGVEAKDSYYPWDYPEHKRNQHEPISADHDLYSEDRWSQAEPP 124
Query: 122 NQRISVWEQLAYMVGILGTISLVLKYFCW--EKRYYYPKFDSPKYQKGVVHYGYHQ 175
+ Y LG +S L + W +K+ Y P GV HY + +
Sbjct: 125 R-----YSNAYYFACFLGVMSGCLALYYWLDDKKMYRPVAAKQYPSPGVKHYTFEK 175
>gi|119570204|gb|EAW49819.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa,
isoform CRA_a [Homo sapiens]
Length = 155
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 31 TPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPW 90
T D PG P+T EER AAKKYN+ E+YE PDDG GDYP LP RDP+Y W
Sbjct: 2 TKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSW 61
Query: 91 DYPMFRTNYGEPLPNDFAISHYGMG-FNEQPVNQRISVWEQLAYMVGILGTISLVLKYFC 149
D P R N+GEP+ H+ + +N V+ + + + G ++ ++ + C
Sbjct: 62 DQPGLRLNWGEPM-------HWHLDMYNRNRVDTSPTPVSWHVMCMQLFGFLAFMI-FMC 113
Query: 150 W 150
W
Sbjct: 114 W 114
>gi|225711832|gb|ACO11762.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 188
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 34 WLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYP 93
W P PKTEEER KAA KY ++P++Y DDG GDYP L ++ DSR + WD+P
Sbjct: 47 WKPSPYPKTEEERIKAAYKYGMIPDDYVPIKDDGDGIGDYPDLGNSSMDSRSGYVAWDFP 106
Query: 94 MFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQ---LAYMV 135
+ NYGEP+ DF + G ++ Q +++ LAYM+
Sbjct: 107 NLKRNYGEPIHIDFLHTMDFWGLDDTTPAQSSMIYKMSCFLAYMM 151
>gi|390337079|ref|XP_001187607.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Strongylocentrotus
purpuratus]
Length = 190
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Query: 35 LPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPM 94
LPG P+T EER AAKKY + E+YE DDG+ GDYP L H D RDP WD+P
Sbjct: 33 LPGPYPETPEERAAAAKKYGMRVEDYEPYADDGWGWGDYPKLKKQHADDRDPHGDWDFPE 92
Query: 95 FRTNYGEPL--PNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLV 144
R N+GE + D + + + N+++ +W+Q + GIL T++ +
Sbjct: 93 DRRNWGEVMHIEQDLFVRQRPNAYKQ---NRKVPLWKQSMILGGILTTLATL 141
>gi|297493880|gb|ADI40662.1| NADH dehydrogenase 1 beta subcomplex 8 [Scotophilus kuhlii]
Length = 119
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 49/79 (62%)
Query: 31 TPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPW 90
T D LPG P+T EER AAKKYN+ E+YE PDDG GDYP LP RDP+Y W
Sbjct: 1 TKDMLPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYDW 60
Query: 91 DYPMFRTNYGEPLPNDFAI 109
D+ R N+GEPL D +
Sbjct: 61 DHSELRLNWGEPLHWDLDM 79
>gi|380024836|ref|XP_003696196.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Apis florea]
Length = 189
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Query: 34 WLPGERPKTEEERRKAAKKYNLLPEEYE-VQPDDGFATGDYPHLPHTHYDSRDPFYPWDY 92
++PG PKT+EE + AA+KY L P+EY+ PD +A GDYP LP D++DPFYPWD
Sbjct: 51 YMPGLYPKTKEEMKAAAEKYGLHPDEYKPCNPDTNYA-GDYPDLPFISVDAKDPFYPWDI 109
Query: 93 PMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLVLKY 147
P R N+ EP + +I +G + E V Q + + +A I+ ++ Y
Sbjct: 110 PALRRNFEEPFHKE-SIMLFGDRY-EYGVRQIVDPNKAIAIYFAIMAVCIIIFYY 162
>gi|350538775|ref|NP_001232113.1| putative NADH dehydrogenase 1 beta subcomplex 8 [Taeniopygia
guttata]
gi|197129479|gb|ACH45977.1| putative NADH dehydrogenase 1 beta subcomplex 8 [Taeniopygia
guttata]
Length = 191
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 50/77 (64%)
Query: 33 DWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDY 92
D +PG P+T EER AAKKYN+ E+Y+ PDDG GDYP LP+ RDP+Y WD
Sbjct: 40 DMMPGPYPRTPEERAAAAKKYNMRVEDYQPYPDDGLGYGDYPMLPNKSQYERDPWYQWDQ 99
Query: 93 PMFRTNYGEPLPNDFAI 109
P R N+GEP+ DF +
Sbjct: 100 PDMRHNWGEPMHWDFDM 116
>gi|229367058|gb|ACQ58509.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Anoplopoma fimbria]
Length = 188
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 4 LRVLSQVKSLGKV--VSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
R +Q S GK S + R A + LPG P T EE+ AAKKYN+ ++YE
Sbjct: 6 FRRWAQALSKGKAPGFSALLSGCRAASGVSKGGLPGPCPTTPEEKAAAAKKYNMRVDDYE 65
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD G + GDYP+LP RDP+Y WD+P R N+GEP+ +F +
Sbjct: 66 PYPDKGESFGDYPNLPERSQHERDPWYQWDHPDLRRNWGEPMHWNFDM 113
>gi|427786699|gb|JAA58801.1| Putative nadh:ubiquinone oxidoreductase ndufb8/ashi subunit
[Rhipicephalus pulchellus]
Length = 181
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 22 NSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPD-DGFATGDYPHLPHTH 80
S R+A + DW PG P+TEEE R AAKKY +L E+Y+V+ + +G GDYP +P
Sbjct: 25 TSCRSAGYWNKDWRPGPTPQTEEEMRAAAKKYKMLYEDYKVRAESEGLTWGDYPKIPTVT 84
Query: 81 YDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGT 140
SRDP +D+P + NY EP+ N + ++ + + R+ + +QLA +G++
Sbjct: 85 AGSRDPEEDYDFPTLKRNYCEPV-NIYVDAYTPERLDLK--RHRVPMRKQLATFLGVVIG 141
Query: 141 ISLVLKYFCW-EKRYYYPKFDSPKY--QKGVVHYGYH 174
+ ++ +F E Y Y P+ GVVHY +
Sbjct: 142 LWYLMDFFNRPEFAYQYSPDMIPEEMPHDGVVHYTFE 178
>gi|197129478|gb|ACH45976.1| putative NADH dehydrogenase 1 beta subcomplex 8 [Taeniopygia
guttata]
Length = 191
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%)
Query: 33 DWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDY 92
D +PG P+T EER AAKKYN+ E+Y+ PDDG GDYP LP RDP+Y WD
Sbjct: 40 DMMPGPYPRTPEERAAAAKKYNMRVEDYQPYPDDGLGYGDYPMLPDKSQYERDPWYQWDQ 99
Query: 93 PMFRTNYGEPLPNDFAI 109
P R N+GEP+ DF +
Sbjct: 100 PDMRHNWGEPMHWDFDM 116
>gi|402856187|ref|XP_003892678.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Papio anubis]
Length = 186
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 48/81 (59%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYD 82
RTA T D PG P+T EER AAKKYN+ E+YE PD+G GDY LP
Sbjct: 25 GARTASRMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDEGMGYGDYLKLPDHSQH 84
Query: 83 SRDPFYPWDYPMFRTNYGEPL 103
RDP+Y WD P R N+GEP+
Sbjct: 85 ERDPWYSWDQPDLRLNWGEPM 105
>gi|66511756|ref|XP_624052.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Apis mellifera]
Length = 187
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Query: 34 WLPGERPKTEEERRKAAKKYNLLPEEYE-VQPDDGFATGDYPHLPHTHYDSRDPFYPWDY 92
++PG PKT+EE + AA+KY L P+EY+ PD +A GDYP LP +++DP+YPWD+
Sbjct: 51 YMPGLYPKTKEEMKAAAEKYGLHPDEYKPCDPDTNYA-GDYPDLPFISVEAKDPYYPWDF 109
Query: 93 PMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLVLKYFC 149
P R N+ EP+ + A +G + E V Q + + +A I+ L+ C
Sbjct: 110 PALRRNFEEPIHKE-ANMLFGDRY-EYGVRQIVEPSKGIAIFCSIMAACILIFWLSC 164
>gi|327283729|ref|XP_003226593.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Anolis carolinensis]
Length = 190
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 33 DWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDY 92
D LPG PKT EER AA+KYN+ E+YE PD+GF GDYP LP RDP+Y WD+
Sbjct: 39 DMLPGPYPKTPEERAAAARKYNMRVEDYEPYPDEGFGYGDYPKLPDRSQQERDPWYEWDH 98
Query: 93 PMFRTNYGEPLPNDFAI-SHYGMGFNEQPVN---QRISVWEQLAYMV 135
R N+GE + DF + + + P++ RIS++ + +M+
Sbjct: 99 SDLRRNHGETMHWDFDMFLRTRVDTSPTPISWRTMRISLFSFIGFML 145
>gi|225706206|gb|ACO08949.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Osmerus mordax]
Length = 188
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 5 RVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQP 64
R LS+ K G L + R A + LPG P T EE+ AAKKYN+ E+YE P
Sbjct: 11 RALSKDKGTGIPTVL--SGARAASGVSKGMLPGPFPTTPEEKAAAAKKYNMRVEDYEPFP 68
Query: 65 DDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
D+G GDYP L RDP+Y WD+P R N+GEP+ +F +
Sbjct: 69 DNGEGYGDYPKLADRSQHERDPWYKWDHPDLRRNWGEPMHWNFDM 113
>gi|157113019|ref|XP_001657727.1| NADH-ubiquinone oxidoreductase ashi subunit [Aedes aegypti]
gi|108883697|gb|EAT47922.1| AAEL000986-PB [Aedes aegypti]
Length = 174
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 7/154 (4%)
Query: 1 MNKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEY 60
+ L++ +++ S K +L + R A + D+ P + P+T++ER AA+KY L P EY
Sbjct: 5 IKGLKLATKISS--KNPALFALATRNAHGWNKDFKPAKYPETDKEREAAARKYGLHPSEY 62
Query: 61 EVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQP 120
+ P+DG GDYP L ++RDP+YP+D+P + N +PL D + + +P
Sbjct: 63 QAYPNDGTGIGDYPKLADVPVEARDPYYPYDFPELKRNLHDPLHADTPLWGEDRFGSAEP 122
Query: 121 VNQRISVWEQLAYMVGILGTISLVLKYFCWEKRY 154
+ + Y + +G ++ + W + Y
Sbjct: 123 LRFSMKF-----YWLSFIGVMTGCFALYYWLEDY 151
>gi|432113067|gb|ELK35645.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Myotis davidii]
Length = 151
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 47/75 (62%)
Query: 35 LPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPM 94
LPG P+T EER AAKKYNL E+YE PDDG GDYP LP RDP+Y WD+
Sbjct: 2 LPGPYPRTPEERAAAAKKYNLRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYDWDHSD 61
Query: 95 FRTNYGEPLPNDFAI 109
R N+GEPL D +
Sbjct: 62 LRLNWGEPLHWDLDM 76
>gi|312377424|gb|EFR24256.1| hypothetical protein AND_11262 [Anopheles darlingi]
Length = 171
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 1 MNKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEY 60
+ L+ +Q+ + + +L SVR + D+ PG+ P+TE+ER AAKKY L P EY
Sbjct: 5 IKGLKFAAQITN--RNPALLYMSVRN-HGWNKDFKPGKFPETEKERELAAKKYGLTPAEY 61
Query: 61 EVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTN 98
+ PDDG GDYP LP T ++RDP+YP+D+P + N
Sbjct: 62 QPYPDDGLGYGDYPKLPDTPVEARDPYYPYDFPELKRN 99
>gi|41053621|ref|NP_957149.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Danio rerio]
gi|38571806|gb|AAH62842.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8 [Danio rerio]
Length = 188
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 6 VLSQVKSLGKVVSLQQ--NSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQ 63
+L+ + GK S+ R A + D LPG PKT EE+ AAKKYN+ PE+Y+
Sbjct: 8 LLTPALTKGKSSSISAIIRGARAASGSSKDSLPGPYPKTAEEKAAAAKKYNMRPEDYQPY 67
Query: 64 PDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPL 103
PDDG+ +GDYP LP RDP+Y WD+P R N+GEP+
Sbjct: 68 PDDGWGSGDYPMLPSRSQHERDPYYQWDHPDLRRNWGEPM 107
>gi|410895443|ref|XP_003961209.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Takifugu rubripes]
Length = 188
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 4 LRVLSQVKSLGKV--VSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
R L+Q GK VS + R A + + G P+T EE+ AAKKYNL +YE
Sbjct: 6 FRRLAQTFCKGKTPGVSAFLPACRAASGASKGPVLGPCPETLEEKAAAAKKYNLTLSDYE 65
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD G GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 66 AYPDKGEGYGDYPKLPDRSQHERDPWYKWDHPDLRRNWGEPMHWDFDM 113
>gi|440909983|gb|ELR59827.1| hypothetical protein M91_08973, partial [Bos grunniens mutus]
Length = 123
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 45/71 (63%)
Query: 31 TPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPW 90
T D LPG PKT EER AKKYN+ E+YE PDDG GDYP LP RDP+Y W
Sbjct: 3 TKDMLPGPYPKTPEERAATAKKYNMQVEDYEPYPDDGMGYGDYPKLPDRSQQERDPWYDW 62
Query: 91 DYPMFRTNYGE 101
++P R N+GE
Sbjct: 63 EHPDLRLNWGE 73
>gi|443702190|gb|ELU00351.1| hypothetical protein CAPTEDRAFT_165694 [Capitella teleta]
Length = 192
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 22 NSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHY 81
++ R + +W PG P T +R AAKKY L E+YE PDDGF GDYP LP
Sbjct: 35 SACRAKGYWNYEWEPGPFPTTPAQRAAAAKKYGLREEDYEPYPDDGFGHGDYPKLPRVSA 94
Query: 82 DSRDPFYPWDYPMFRTNYGEPL--PNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILG 139
DSR WD P R N+GEP+ +D ++HY + ++RIS+ + + +G
Sbjct: 95 DSRSYHDTWDDPSNRRNFGEPMHVDSDALVAHYWDPTTYE--SRRISLSQIRNLFILGIG 152
Query: 140 TISLVL 145
T L+
Sbjct: 153 TYVLIF 158
>gi|157113021|ref|XP_001657728.1| NADH-ubiquinone oxidoreductase ashi subunit [Aedes aegypti]
gi|108883698|gb|EAT47923.1| AAEL000986-PA [Aedes aegypti]
Length = 127
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 1 MNKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEY 60
+ L++ +++ S K +L + R A + D+ P + P+T++ER AA+KY L P EY
Sbjct: 5 IKGLKLATKISS--KNPALFALATRNAHGWNKDFKPAKYPETDKEREAAARKYGLHPSEY 62
Query: 61 EVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPL 103
+ P+DG GDYP L ++RDP+YP+D+P + N +P+
Sbjct: 63 QAYPNDGTGIGDYPKLADVPVEARDPYYPYDFPELKRNLHDPV 105
>gi|158301324|ref|XP_321035.4| AGAP002020-PA [Anopheles gambiae str. PEST]
gi|157012416|gb|EAA01257.4| AGAP002020-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 14 GKVVSLQQNSVRTAFVYTP--------DWLPGERPKTEEERRKAAKKYNLLPEEYEVQPD 65
G ++ Q ++ A +YT D+ PG+ P+++++R AAKKY L EY+ PD
Sbjct: 7 GIKLAAQISNRNPAILYTSVRHHGWNKDYKPGKFPESDKDREAAAKKYGLTTAEYQPYPD 66
Query: 66 DGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRI 125
DG GDYP LP ++RDP+YP+D+P + N + L + + +P+
Sbjct: 67 DGLGYGDYPKLPDVPVEARDPYYPYDFPELKRNLHDTLHAETDFWSEDRFGSAEPLR--- 123
Query: 126 SVWEQLAYMVGILGTISLVLKYFCWEKRY--YYPKFDSPKYQKGVVHYGYHQK 176
+E Y + LG ++ + W + Y + P +G HY + +K
Sbjct: 124 --YEMKTYWLAFLGVMTGCFAVYYWLENYKMFRPVLAKQYPHEGKSHYTFDKK 174
>gi|389608795|dbj|BAM18009.1| NADH-ubiquinone oxidoreductase ashi subunit [Papilio xuthus]
Length = 173
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 7/171 (4%)
Query: 6 VLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPD 65
++S + K + N+ R + Y + PG P+T ER AAKKY + EEY+ P+
Sbjct: 10 LISNPNGVRKAAEIFCNATRNHWNY--QYKPGPYPRTPAERAAAAKKYGMTIEEYQPYPE 67
Query: 66 DGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRI 125
GDYP LP DS+DP+YP+D P + N+ EP+ + YG + + R
Sbjct: 68 H-MCYGDYPKLPDIGSDSKDPYYPYDQPELKRNFNEPIHATQEL--YGEDRYDVSMKPRF 124
Query: 126 SVWEQLAYMVGILGTISLVLKYFCWEKRYYYPKFDSPKYQKGVVHYGYHQK 176
S+ Q + +G++G S L F + ++ P +Y K HY + QK
Sbjct: 125 SLLHQWTWFLGVIGG-SFALYMFLEDYKFGRP-VTIKQYPKDGPHYLFCQK 173
>gi|355706827|gb|AES02764.1| NADH dehydrogenase 1 beta subcomplex, 8, 19kDa [Mustela putorius
furo]
Length = 111
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 43/68 (63%)
Query: 36 PGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMF 95
PG PK EER AAKKYN+ E+YE PDDG GDYP LP RDP+Y WD+
Sbjct: 1 PGPYPKPPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQQERDPWYNWDHSDL 60
Query: 96 RTNYGEPL 103
R N+GEP+
Sbjct: 61 RLNWGEPI 68
>gi|449269104|gb|EMC79910.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial, partial [Columba livia]
Length = 154
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 33 DWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDY 92
D LPG P+T EE AKKYN+ E+YE PDDGF GDYP LP+ RDP+Y WD
Sbjct: 6 DLLPGPYPRTPEE---PAKKYNMRVEDYEPYPDDGFGYGDYPKLPNKSLHERDPWYQWDQ 62
Query: 93 PMFRTNYGEPLPNDFAI 109
P R N+G+P+ DF +
Sbjct: 63 PDMRHNWGQPMHWDFDM 79
>gi|307179547|gb|EFN67861.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Camponotus floridanus]
Length = 176
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 22/176 (12%)
Query: 13 LGKVVSLQQNSVRT-AFVYTPDWLPGERPK-----------TEEERRKAAKKYNLLPEEY 60
+ K+ L R AF+Y+ +RP E++ K+A+KYN+ P+EY
Sbjct: 4 MSKLCGLSSQLFRNKAFIYSTARCYSDRPMPWPTLWQPKKYQEKDHDKSAEKYNIHPKEY 63
Query: 61 EVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI---SHYGMGFN 117
+ P + + GDYP LP ++DP+YP+D P ++ NY EP+ +DF I + G+
Sbjct: 64 KPLPQEE-SLGDYPDLPLIGPAAKDPYYPYDIPTYKKNYMEPVHHDFNIMGEDRFSYGY- 121
Query: 118 EQPVNQRISVWEQLAYMVGILGTISLVLKYFCWEKRYYYPKFDSPKYQKGVVHYGY 173
RI+++ A + I TI L + Y C + P + QKG VHY +
Sbjct: 122 ----KYRINLYAGTAAFL-ITMTILLGISYLCEPYPTFMPMLEKQYPQKGKVHYTF 172
>gi|291232943|ref|XP_002736413.1| PREDICTED: NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8-like
[Saccoglossus kowalevskii]
Length = 187
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 29 VYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFY 88
+ + D +PG P+T ER +AAKKYN+ E+YE PDDG GDYP L H SR +
Sbjct: 31 MLSKDEMPGPYPRTPAERARAAKKYNMRVEDYEPYPDDGTGWGDYPKLSSNHVSSRSNWD 90
Query: 89 PWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLVL 145
WD+P R NYG+ D I F ++ N + A + G L I ++
Sbjct: 91 DWDFPEIRRNYGDVYHIDEDIMWRNRPFWDKQTNPPFKI--MAAQLFGFLTAIGVLF 145
>gi|350401628|ref|XP_003486212.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Bombus impatiens]
Length = 184
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 12/116 (10%)
Query: 34 WLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYP 93
+LPG PKTE+E AA+KYN+ +EY+ D + DYP+LP +++DP+YPWD+P
Sbjct: 48 YLPGPYPKTEKEWIAAAEKYNMHIDEYKAYAPDKDSLVDYPNLPLISVEAKDPYYPWDHP 107
Query: 94 MFRTNYGEPLPNDFAI-----SHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLV 144
R YGE LP F + YG V Q IS + A +G + T ++
Sbjct: 108 GPRICYGETLPKRFDLLQGDRCSYG-------VRQSISDLKGAAIYIGFVLTYFMI 156
>gi|297288566|ref|XP_001082646.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Macaca mulatta]
Length = 191
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 1 MNKLRVLSQVKSLGKVVSLQQNSVRTAFV-------YTPDWLPGERPKTEEERRKAAKKY 53
M K+++ + V LQ+ S + T D PG P+T EE AAKKY
Sbjct: 1 MKKVKMAVARAGVLGVQWLQRESRNVVLLGAQPASRITKDLFPGLYPRTPEELAAAAKKY 60
Query: 54 NLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPL 103
+ E+Y+ PD+G GDYP LP +DP+Y WD P R N+GEP+
Sbjct: 61 IMRVEDYQRYPDEGMGYGDYPKLPDRSQHEKDPWYSWDQPDLRLNWGEPM 110
>gi|109114559|ref|XP_001109609.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Macaca mulatta]
Length = 186
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 42/77 (54%)
Query: 26 TAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRD 85
TA T D LP P+T E R KKYN+ +YE PDDG GDYP LP R+
Sbjct: 28 TASRMTNDMLPASYPRTPEGRAATPKKYNMCVGDYEPYPDDGMRYGDYPKLPDCSQHERN 87
Query: 86 PFYPWDYPMFRTNYGEP 102
P+Y WD P R N GEP
Sbjct: 88 PWYSWDQPDLRLNCGEP 104
>gi|340718364|ref|XP_003397638.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Bombus terrestris]
Length = 186
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 14/151 (9%)
Query: 1 MNKLRVLSQVKSLGKVVSLQQNSVRTAFV--YTPDWLPGERPKTEEERRKAAKKYNLLPE 58
M + S ++ K+V L + V T + Y +LPG P+TEEE AA KYN+ +
Sbjct: 15 MENAPLTSFIRKYEKLVKLSEYEVLTKKLQPYQKKYLPGPYPRTEEEWIAAADKYNMHID 74
Query: 59 EYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI-----SHYG 113
EY+ + DYP+LP +++DP+YPWD+ +T YGE LP F + +YG
Sbjct: 75 EYKAYAPEKGTLVDYPNLPLISAEAKDPYYPWDHLGPKTCYGETLPKHFHLLQGDRCNYG 134
Query: 114 MGFNEQPVNQRISVWEQLAYMVGILGTISLV 144
V Q IS + A +G + L+
Sbjct: 135 -------VRQPISDLKGAAIYIGFVIVYFLI 158
>gi|402863789|ref|XP_003896181.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Papio anubis]
Length = 186
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 44/73 (60%)
Query: 31 TPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPW 90
T D PG P+T EE AAKKY + E+YE PD+G GDYP LP +DP+Y W
Sbjct: 33 TKDMFPGLYPRTPEELAAAAKKYIMHVEDYEHYPDEGMGYGDYPKLPDRSQHEKDPWYSW 92
Query: 91 DYPMFRTNYGEPL 103
D P R N+GEP+
Sbjct: 93 DQPDLRLNWGEPM 105
>gi|349805011|gb|AEQ17978.1| putative nadh dehydrogenase 1 beta subunit [Hymenochirus curtipes]
Length = 139
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 42/65 (64%)
Query: 45 ERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLP 104
ER AAKKYN+ E+YE PDDG GDYP LP RDP+Y WD+P R N+GEP+
Sbjct: 1 ERAAAAKKYNMRVEDYEPYPDDGMGFGDYPKLPDKSQQERDPWYTWDHPDLRRNWGEPIH 60
Query: 105 NDFAI 109
DF +
Sbjct: 61 WDFDM 65
>gi|332025173|gb|EGI65353.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Acromyrmex echinatior]
Length = 177
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 42 TEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGE 101
+E+E K A+KYNL P+EYE P + + GDYP LP ++DP+YP+D P+FR NY E
Sbjct: 45 SEKEHDKIAEKYNLHPKEYEPNPPEKY-LGDYPKLPMIGPAAKDPYYPYDIPIFRKNYHE 103
Query: 102 PLPNDFAI---SHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLVLKYFCWEKRY--YY 156
L +F I + G+N + +N + L+ M+ ++G L Y + R +
Sbjct: 104 TLHANFEIMGEDRFSYGYNYR-INPYVGSAIWLSVMIFLVGITYLANPYSTIQIRMERQF 162
Query: 157 PKFDSPKYQKGVVHYGY 173
PK D VVHY +
Sbjct: 163 PKED-------VVHYSF 172
>gi|260801761|ref|XP_002595764.1| hypothetical protein BRAFLDRAFT_200633 [Branchiostoma floridae]
gi|229281011|gb|EEN51776.1| hypothetical protein BRAFLDRAFT_200633 [Branchiostoma floridae]
Length = 163
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 33 DWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDY 92
D +PG P+T EE AAKKY + E+Y+ PDDG GDYP LP +S+DP+ WD
Sbjct: 7 DEMPGPYPRTPEEWAAAAKKYGMRVEDYQPYPDDGTGYGDYPMLPEEGAESQDPWVDWDD 66
Query: 93 PMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQL-AYMVGILGTISLVL 145
R NYG+ +P+ + ++ N P + + W+++ A +VG LG ++L
Sbjct: 67 NWHRRNYGD-VPHVHSDAYTRQRVN--PSQKYVVPWKKMIAALVGFLGFNGIML 117
>gi|226372382|gb|ACO51816.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Rana catesbeiana]
Length = 198
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 5 RVLSQVKSLGKVVS----LQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEY 60
R S+V G+ V + SVR A +PG PKT EER AAKKYNL E+Y
Sbjct: 14 RSASRVPIAGRRVGAGWLVPYASVRAAHDIPHHLMPGPYPKTAEERAAAAKKYNLPLEDY 73
Query: 61 EVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDF 107
+ PDDG GDYP LP + RDP+Y WD+ FR N+GE L DF
Sbjct: 74 KPYPDDGMGYGDYPMLPEKSQEERDPWYTWDHSDFRRNWGETLHWDF 120
>gi|308322083|gb|ADO28179.1| mitochondrial NADH dehydrogenase 1 beta subcomplex subunit 8
[Ictalurus furcatus]
Length = 185
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT 70
K+ G+++ + S R A D LPG P+T EER AAKKYNL E+Y+ PDDG
Sbjct: 13 KNRGQII-YKLISARAASGVPQDVLPGPYPRTAEERAAAAKKYNLRLEDYQPHPDDGHGY 71
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 72 GDYPVLPDRSQHERDPWYQWDHPDLRRNWGEPIHYDFDM 110
>gi|47181426|emb|CAG13652.1| unnamed protein product [Tetraodon nigroviridis]
Length = 67
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 40 PKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNY 99
P++ EE+ AAKKYN+ EYE PD+G GDYP LP RDP+Y WD+P R N+
Sbjct: 3 PQSLEEKAAAAKKYNMTLSEYEPYPDNGEGYGDYPKLPDRSQHERDPWYKWDHPDLRRNW 62
Query: 100 GEPL 103
GEP+
Sbjct: 63 GEPV 66
>gi|319059314|ref|NP_001187868.1| mitochondrial NADH dehydrogenase (ubiquinone) 1 beta subcomplex
subunit 8 [Ictalurus punctatus]
gi|308324190|gb|ADO29230.1| mitochondrial NADH dehydrogenase (ubiquinone) 1 beta subcomplex
subunit 8 [Ictalurus punctatus]
Length = 185
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT 70
K+ G+++ + S R A D LPG P+T EER AAKKYNL E+Y+ PDDG
Sbjct: 13 KNRGQII-YKLLSARAASGVPQDVLPGPYPRTAEERAAAAKKYNLRLEDYQPHPDDGHGY 71
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 72 GDYPVLPDRSQHERDPWYQWDHPDLRRNWGEPIHYDFDM 110
>gi|326923625|ref|XP_003208035.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like, partial [Meleagris
gallopavo]
Length = 138
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 49 AAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFA 108
AAKKYN+ E+Y+ PDDGF GDYP LP+ RDP+Y WD P R N+GEP+ DF
Sbjct: 3 AAKKYNMRVEDYQPYPDDGFGYGDYPMLPNKSAHERDPWYQWDQPDLRRNWGEPMHWDFD 62
Query: 109 I 109
+
Sbjct: 63 M 63
>gi|57529832|ref|NP_001006502.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial precursor [Gallus gallus]
gi|53133304|emb|CAG31981.1| hypothetical protein RCJMB04_15e3 [Gallus gallus]
Length = 191
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 52/79 (65%)
Query: 31 TPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPW 90
T D LPG P+T EER AAKKYN+ E+Y+ PDDGF GDYP LP+ RDP+Y W
Sbjct: 38 TKDQLPGPYPRTAEERAAAAKKYNMRVEDYQPYPDDGFGYGDYPMLPNKSIHERDPWYQW 97
Query: 91 DYPMFRTNYGEPLPNDFAI 109
D P R N+GEP+ DF +
Sbjct: 98 DQPDMRRNWGEPMHWDFDM 116
>gi|226471830|emb|CAX76953.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
Length = 173
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 15 KVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYP 74
+ S+ R Y +W P P T+ ER AAK+YNLLP +Y+ DDG A GDY
Sbjct: 8 RCRSILTPLCRGMAHYHIEWKPKPYPCTKAEREAAAKRYNLLPSDYKPFEDDGLAPGDYF 67
Query: 75 HLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQR----ISVWEQ 130
+ + ++ DP+ P+D+P+ R N+ EP+ F Y + ++R SVW
Sbjct: 68 CVEPYNVNNCDPWEPYDFPLERRNFSEPV--QFNAHMYSAAGCDPEYSKRYQRGTSVWWV 125
Query: 131 LAYMVG---ILGTISLVLKYFCW 150
L + ++G + V + +C+
Sbjct: 126 LLKIFAPLFVIGGLLYVGQMYCY 148
>gi|226471812|emb|CAX76944.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
gi|226471814|emb|CAX76945.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
gi|226471816|emb|CAX76946.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
gi|226471818|emb|CAX76947.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
gi|226471820|emb|CAX76948.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
gi|226471822|emb|CAX76949.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
gi|226471824|emb|CAX76950.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
gi|226471826|emb|CAX76951.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
gi|226471828|emb|CAX76952.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
Length = 173
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 15 KVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYP 74
+ S+ R Y +W P P T+ ER AAK+YNLLP +Y+ DDG A GDY
Sbjct: 8 RCRSILTPLCRGMAHYHIEWKPKPYPCTKAEREAAAKRYNLLPSDYKPFEDDGLAPGDYF 67
Query: 75 HLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQR----ISVWEQ 130
+ + ++ DP+ P+D+P+ R N+ EP+ F Y + ++R SVW
Sbjct: 68 CVEPYNVNNCDPWEPYDFPLERRNFSEPV--QFNAHMYSAAGCDPEYSKRYQRGTSVWWV 125
Query: 131 LAYMVG---ILGTISLVLKYFCW 150
L + ++G + V + +C+
Sbjct: 126 LLKIFAPLFVIGGLLYVGQMYCY 148
>gi|209737956|gb|ACI69847.1| NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial
precursor [Salmo salar]
Length = 179
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 2 NKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYE 61
N R LS+ K G Q VR A + LPG PKT EER AAKKYN+ E+YE
Sbjct: 8 NWARALSKGKQPGFSALFSQ--VRAASGPSKGMLPGPYPKTPEERAAAAKKYNMRVEDYE 65
Query: 62 VQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
PD+G GDYP LP RD R N+GEP+ DF +
Sbjct: 66 PIPDNGEGYGDYPLLPDRSQHERD---------LRRNWGEPIHWDFDM 104
>gi|405967812|gb|EKC32939.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Crassostrea gigas]
Length = 194
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 4 LRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEV- 62
L V V + + +S S+ + + D+ PG PKTEEER KAAKKY + PE+Y+
Sbjct: 10 LLVRQPVSVVKRSISTSPRSLGGVY-FEKDFFPGPYPKTEEERLKAAKKYGMQPEDYKPW 68
Query: 63 QPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVN 122
+ D + +GDYP + D + + WD +TN+ EP+ A + + + N +
Sbjct: 69 ENHDKWGSGDYPEIQPIGEDLKSEYEVWDDKSTKTNFNEPVEIIQAPTGFKLMTNSK--- 125
Query: 123 QRISVWEQLAYMVGILGTISLVLKYFC 149
E G++GT L L YFC
Sbjct: 126 ------EMRVVFFGMIGTFVL-LHYFC 145
>gi|256077421|ref|XP_002575003.1| NADH-ubiquinone oxidoreductase [Schistosoma mansoni]
gi|353233100|emb|CCD80455.1| putative nadh-ubiquinone oxidoreductase ashi subunit [Schistosoma
mansoni]
Length = 173
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 24 VRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDS 83
R+ Y DW P P T+ ER AAK+YNLLP +Y+ +DG A GDY ++ + +
Sbjct: 17 CRSMAYYHIDWKPKPYPCTKAEREAAAKRYNLLPSDYKPFENDGLAPGDYFYVEPYNTEC 76
Query: 84 RDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRIS---VWEQL----AYMVG 136
R P+ P+DYP R ++ +P D A + G+N + + + VW L A + G
Sbjct: 77 RSPWEPYDYPSERRDFNDPQQFD-AQLYLASGYNPAKLKEILKGQPVWYMLFKTFAPLFG 135
Query: 137 ILGTISL 143
+ +SL
Sbjct: 136 LWFCLSL 142
>gi|226473274|emb|CAX71323.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
Length = 173
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 15 KVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYP 74
+ S+ R Y +W P P T+ ER AAK+YNLLP +Y+ +DG A GDY
Sbjct: 8 RCRSILNPLCRGMAHYHIEWKPKPYPCTKAEREAAAKRYNLLPSDYKPFENDGLAPGDYF 67
Query: 75 HLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQR----ISVWEQ 130
+ + ++ DP+ P+D+P+ R N+ EP+ F Y + ++R SVW
Sbjct: 68 CVEPYNVNNCDPWEPYDFPLERRNFSEPV--QFNAHMYSAAGCDPEYSKRYQRGTSVWWI 125
Query: 131 LAYMVG---ILGTISLVLKYFCW 150
L + ++G + V + +C+
Sbjct: 126 LLKIFAPLFVIGGLLYVGQMYCY 148
>gi|226471832|emb|CAX76954.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
gi|226471834|emb|CAX76955.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
Length = 122
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%)
Query: 15 KVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYP 74
+ S+ R Y +W P P T+ ER AAK+YNLLP +Y+ DDG A GDY
Sbjct: 8 RCRSILTPLCRGMAHYHIEWKPKPYPCTKAEREAAAKRYNLLPSDYKPFEDDGLAPGDYF 67
Query: 75 HLPHTHYDSRDPFYPWDYPMFRTNYGEPL 103
+ + ++ DP+ P+D+P+ R N+ EP+
Sbjct: 68 CVEPYNVNNCDPWEPYDFPLERRNFSEPV 96
>gi|226473272|emb|CAX71322.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Schistosoma
japonicum]
Length = 173
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 15 KVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYP 74
+ S+ R Y +W P P T+ ER AAK+YNLLP +Y+ DG A GDY
Sbjct: 8 RCRSILTPLCRGMAHYHIEWKPKPYPCTKAEREAAAKRYNLLPSDYKPFEGDGLAPGDYF 67
Query: 75 HLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQR----ISVWEQ 130
+ + ++ DP+ P+D+P+ R N+ EP+ F Y + ++R SVW
Sbjct: 68 CVEPYNVNNCDPWEPYDFPLERRNFSEPV--QFNAHMYSAAGCDPEYSKRYQRGTSVWWV 125
Query: 131 LAYMVG---ILGTISLVLKYFCW 150
L + ++G + V + +C+
Sbjct: 126 LLKIFAPLFVIGGLLYVGQMYCY 148
>gi|358339502|dbj|GAA47555.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 [Clonorchis
sinensis]
Length = 169
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 4 LRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQ 63
LR L L +V+S R + +W P P T +R AAK+Y LL +Y+
Sbjct: 2 LRCLLSGPPLSRVLS--GTCSRKLAYWNIEWKPAPYPCTSAQREAAAKRYGLLLTDYQPF 59
Query: 64 PDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLP 104
DDG+A GDYP++ + + +RDP+ +DY + NY EP+P
Sbjct: 60 EDDGYAPGDYPNMRNYNEANRDPWEHYDYYPVKRNYNEPVP 100
>gi|440907036|gb|ELR57229.1| hypothetical protein M91_14395, partial [Bos grunniens mutus]
Length = 116
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 40/70 (57%)
Query: 33 DWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDY 92
D LPG PKT EE+ AKKYN+ E+ E DDG G+Y P + RDP+ WD+
Sbjct: 5 DVLPGSYPKTLEEQVTIAKKYNMQMEDEEPWLDDGMGYGNYLKFPDSSQQERDPWCDWDH 64
Query: 93 PMFRTNYGEP 102
P N+GEP
Sbjct: 65 PDLMLNWGEP 74
>gi|357623965|gb|EHJ74906.1| putative NADH-ubiquinone oxidoreductase ashi subunit [Danaus
plexippus]
Length = 129
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 45 ERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLP 104
ER+ AAKKY L EEY+ P++ GDYP LP DS+DP YP+D P + N+ EP
Sbjct: 3 ERQAAAKKYGLSIEEYQPYPEE-MGYGDYPKLPDIGTDSKDPHYPYDLPDLKRNFNEP-- 59
Query: 105 NDFAISHYGMG---FNEQPVNQRISVWEQLAYMVGIL 138
F ++ +G FN V RI +W+Q + +G +
Sbjct: 60 --FHVASEIIGEDRFNIS-VKHRIPMWQQWTWFLGAM 93
>gi|256077423|ref|XP_002575004.1| NADH-ubiquinone oxidoreductase [Schistosoma mansoni]
gi|353233099|emb|CCD80454.1| putative nadh-ubiquinone oxidoreductase ashi subunit [Schistosoma
mansoni]
Length = 122
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 24 VRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDS 83
R+ Y DW P P T+ ER AAK+YNLLP +Y+ +DG A GDY ++ + +
Sbjct: 17 CRSMAYYHIDWKPKPYPCTKAEREAAAKRYNLLPSDYKPFENDGLAPGDYFYVEPYNTEC 76
Query: 84 RDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFN 117
R P+ P+DYP R ++ +P D + + G+N
Sbjct: 77 RSPWEPYDYPSERRDFNDPQQFDAQL-YLASGYN 109
>gi|308493195|ref|XP_003108787.1| hypothetical protein CRE_11674 [Caenorhabditis remanei]
gi|308247344|gb|EFO91296.1| hypothetical protein CRE_11674 [Caenorhabditis remanei]
Length = 199
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 8 SQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDG 67
S+ L +V+S++ + Y D P P EEERR AA KY L PE+Y D
Sbjct: 13 SRSFHLARVMSMRGPLTFDGW-YPRDHKPSAPPTNEEERRAAAVKYGLRPEDYHSMDKDD 71
Query: 68 FA--TGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVN-QR 124
GDYP L YD +DP+ W R N+GE +P D + + G + +
Sbjct: 72 VIKFAGDYPDLGVVTYDHKDPYEAWTDRQNRRNWGELVPIDM-MRYRGDRLTFTGLEAED 130
Query: 125 ISVWEQLAYMVGILGTISLVLKYFC 149
+ W + + +L ++L+ YFC
Sbjct: 131 YTTWGSIVMCLRVLVPMALIAWYFC 155
>gi|268532774|ref|XP_002631515.1| Hypothetical protein CBG20679 [Caenorhabditis briggsae]
Length = 199
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 8 SQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDG 67
S+ L +V+S++ + Y D P P EEERR AA KY L PE+Y D
Sbjct: 13 SRSFHLARVMSMRGPLTFDGW-YPRDHKPNAPPTNEEERRAAAVKYGLRPEDYHSMDKDD 71
Query: 68 FA--TGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVN-QR 124
GDYP L YD +DP+ W R N+GE +P D + + G + +
Sbjct: 72 VIKFAGDYPDLGVVTYDHKDPYEAWTDRQNRRNWGELVPIDM-MRYRGDRLTFTGLEAED 130
Query: 125 ISVWEQLAYMVGILGTISLVLKYFC 149
+ W + + +L ++L+ YFC
Sbjct: 131 YTTWGSIVMCLRVLVPMALIAWYFC 155
>gi|341884848|gb|EGT40783.1| hypothetical protein CAEBREN_07332 [Caenorhabditis brenneri]
gi|341892517|gb|EGT48452.1| hypothetical protein CAEBREN_21826 [Caenorhabditis brenneri]
Length = 199
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 8 SQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDG 67
S+ L +V+S++ + Y D P P E ERR AA KY L PE+Y D
Sbjct: 13 SRSFHLARVMSMRGPLTFDGW-YPRDHKPSAPPTNEAERRAAAVKYGLRPEDYHSMDKDD 71
Query: 68 FA--TGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVN-QR 124
GDYP L YD +DP+ W R N+GE +P D + + G + +
Sbjct: 72 VVKFAGDYPDLGIITYDHKDPYEAWTDRQNRRNWGELVPIDM-MRYRGDRLTFTGLEAED 130
Query: 125 ISVWEQLAYMVGILGTISLVLKYFC 149
+ W + + +L ++L+ YFC
Sbjct: 131 YTTWGSIVMCLRVLVPMALIAWYFC 155
>gi|198426608|ref|XP_002126538.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 beta
subcomplex 8 (predicted) [Ciona intestinalis]
Length = 230
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 42 TEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGE 101
+ E R A KY L+PE+Y D F GDYP LP RDP+Y WD P +R N+G+
Sbjct: 65 SPERRATLAAKYGLIPEDYHPMNDSLFNLGDYPILPAESCLERDPYYDWDDPFYRRNWGD 124
Query: 102 PLPNDFAI 109
P+ D +
Sbjct: 125 PISIDVDL 132
>gi|17537341|ref|NP_496907.1| Protein Y51H1A.3, isoform a [Caenorhabditis elegans]
gi|3881089|emb|CAA21667.1| Protein Y51H1A.3, isoform a [Caenorhabditis elegans]
Length = 199
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Query: 8 SQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDG 67
S+ L +++S++ + Y D P P EEERR AA KY L PE+Y+ D
Sbjct: 13 SRSLHLARIMSMRGPLTFDGW-YPRDHKPSAPPTNEEERRAAAVKYGLRPEDYQSMDKDD 71
Query: 68 FA--TGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVN-QR 124
GDYP L YD +DP+ W R N+GE +P D + + G + +
Sbjct: 72 VIKFAGDYPDLGVITYDHKDPYEAWTDRQNRRNWGELVPIDM-MRYRGDRLTFTGLEAED 130
Query: 125 ISVWEQLAYMVGILGTISLVLKYFCWE 151
+ W + + +L ++L+ YF E
Sbjct: 131 YTTWNSIVMCLRVLVPMALLAWYFTNE 157
>gi|17537343|ref|NP_496908.1| Protein Y51H1A.3, isoform b [Caenorhabditis elegans]
gi|3881090|emb|CAA21668.1| Protein Y51H1A.3, isoform b [Caenorhabditis elegans]
Length = 215
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 30 YTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFA--TGDYPHLPHTHYDSRDPF 87
Y D P P EEERR AA KY L PE+Y+ D GDYP L YD +DP+
Sbjct: 50 YPRDHKPSAPPTNEEERRAAAVKYGLRPEDYQSMDKDDVIKFAGDYPDLGVITYDHKDPY 109
Query: 88 YPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVN-QRISVWEQLAYMVGILGTISLVLK 146
W R N+GE +P D + + G + + + W + + +L ++L+
Sbjct: 110 EAWTDRQNRRNWGELVPIDM-MRYRGDRLTFTGLEAEDYTTWNSIVMCLRVLVPMALLAW 168
Query: 147 YFC 149
YF
Sbjct: 169 YFT 171
>gi|312085004|ref|XP_003144505.1| hypothetical protein LOAG_08927 [Loa loa]
gi|307760330|gb|EFO19564.1| hypothetical protein LOAG_08927 [Loa loa]
Length = 131
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 6 VLSQVKSLGKVVSLQQNSVRTAFVYTP-DWLPGERPKTEEERRKAAKKYNLLPEEYEVQP 64
VL V+++ + + T + P D +P + PK EEERR AA KY + PE+Y+
Sbjct: 7 VLLCVRTVHTSCRMNKRGPLTIDGWYPRDHMPDDYPKNEEERRAAAIKYGMRPEDYKPYD 66
Query: 65 DDGF--ATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISH 111
D + G+YP YD +DP+ W P +R N+GE + N A+ H
Sbjct: 67 KDDYYKYAGNYPDYGCVTYDHKDPYENWSDPHYRRNWGEGM-NIQAVMH 114
>gi|170591006|ref|XP_001900262.1| NADH-ubiquinone oxidoreductase ASHI subunit, mitochondrial
precursor [Brugia malayi]
gi|158592412|gb|EDP31012.1| NADH-ubiquinone oxidoreductase ASHI subunit, mitochondrial
precursor, putative [Brugia malayi]
Length = 139
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 6 VLSQVKSLGKVVSLQQNSVRTAFVYTP-DWLPGERPKTEEERRKAAKKYNLLPEEYE-VQ 63
VL V+S+ + + T + P D +P + PK EEERR AA KY + E+Y+
Sbjct: 15 VLLCVRSIHTSCRMNKRGPLTIDGWYPRDHMPDDYPKNEEERRAAAIKYGMRLEDYKPYD 74
Query: 64 PDDGFA-TGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPL 103
DD + G+YP YD +DP+ W P +R N+GE +
Sbjct: 75 KDDCYKYAGNYPDYGCVTYDHKDPYENWSDPHYRRNWGEGM 115
>gi|307192650|gb|EFN75812.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Harpegnathos saltator]
Length = 183
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 34 WLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYP 93
W PGE K + K A+KY+L P++Y+ + DYP LP ++DP+YP+D P
Sbjct: 41 WEPGEYSKKAHD--KIAEKYHLHPKDYKPLATNC----DYPDLPMIGAAAKDPYYPYDLP 94
Query: 94 MFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLVL 145
+ NY E + + F I+ FN N RI V + GT + +
Sbjct: 95 AIKKNYHETMHHQFDITTEDR-FNFGQTN-RIDSGVATLICVTVFGTFAAIF 144
>gi|397520957|ref|XP_003830573.1| PREDICTED: LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1
beta subcomplex subunit 8, mitochondrial-like [Pan
paniscus]
Length = 272
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFAT 70
++ KVVSL S +F D G KT EE AAKKYN+ E+Y+ DDG
Sbjct: 102 RATQKVVSL---SAWPSFHMIKDMPLGFYSKTPEEWATAAKKYNMCVEDYQPYLDDGMGY 158
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGE 101
G+Y RD ++ WD+ R N+GE
Sbjct: 159 GNYSKFFDHSQXERDLWFDWDHQDLRLNWGE 189
>gi|402585179|gb|EJW79119.1| hypothetical protein WUBG_09972 [Wuchereria bancrofti]
Length = 95
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 35 LPGERPKTEEERRKAAKKYNLLPEEYE-VQPDDGFA-TGDYPHLPHTHYDSRDPFYPWDY 92
+P + PK EEERR AA KY + E+Y+ DD + G+YP YD +DP+ W
Sbjct: 1 MPDDYPKNEEERRAAAIKYGMRLEDYKPYDKDDCYKYAGNYPDYGCVTYDHKDPYENWSD 60
Query: 93 PMFRTNYGEPL 103
P +R N+GE +
Sbjct: 61 PHYRRNWGEGM 71
>gi|339256690|ref|XP_003370221.1| NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8)
superfamily [Trichinella spiralis]
gi|316965620|gb|EFV50309.1| NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8)
superfamily [Trichinella spiralis]
Length = 191
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 22/165 (13%)
Query: 13 LGKVVSLQQNSVRTAFVYTP-----DWL----------PGERPKTEEERRKAAKKYNLLP 57
+ V + ++ +R Y P DW+ P P+T E+R+ AA +Y L
Sbjct: 1 MSLAVRIGKSGIRFVSQYPPLNRGRDWVIEGWWIRDHKPDSWPETAEQRKLAAMRYGLRE 60
Query: 58 EEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFN 117
E+Y P + G+YP L +Y +DP+ W YP R N+ EP+ + F + +
Sbjct: 61 EDYCPYPRE-MHVGNYPDLGRINYALKDPYENWSYPGMRRNFNEPV-DFFHDVIFADRYT 118
Query: 118 EQPVNQRISVWEQLAYMVGILGTISLVLKYFCWEKRYYYPKFDSP 162
V + S W++L ++ +G L F + R+ P + P
Sbjct: 119 VTGVEYK-SSWQKLVRLLQYIGGFGL----FIYLTRFLIPTNEVP 158
>gi|301613811|ref|XP_002936399.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial [Xenopus (Silurana) tropicalis]
Length = 191
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 4 LRVLSQVKSLGKV-------VSLQQNSVRTAFVYTPDWLPG-ERPKTEEERRKAAKKYNL 55
+R L++ +LG SL Q S A + D+L + P E+++ Y +
Sbjct: 9 VRSLTRRAALGAYSVSGDHGASLVQRSAVRAVGGSQDYLESFQNPLYHNEQQRKGFHYTV 68
Query: 56 LPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
+E E + GDYP LP RDP+Y WD+P R N+GEP+ DF +
Sbjct: 69 SLKEKE-------SFGDYPRLPEKSQQERDPWYSWDHPDLRRNWGEPMQWDFDM 115
>gi|194041858|ref|XP_001924237.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like, partial [Sus scrofa]
Length = 71
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGF 68
++ KVV L RTA T D PG PKT EER AAKKYN+ E+YE PDDG
Sbjct: 16 RAARKVVPL---GARTASHVTKDMFPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGM 70
>gi|402881222|ref|XP_003904174.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Papio anubis]
Length = 71
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 28/47 (59%)
Query: 23 SVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFA 69
RTA T D PG P+T EER AAKKYN+ E+YE PD+G
Sbjct: 25 GARTASRMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDEGMG 71
>gi|5327006|emb|CAB46274.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8 [Homo
sapiens]
Length = 43
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 25/39 (64%)
Query: 31 TPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDGFA 69
T D PG P+T EER AAKKYN+ E+YE PDDG
Sbjct: 5 TKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMG 43
>gi|444732491|gb|ELW72783.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Tupaia chinensis]
Length = 98
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 59 EYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
+YE DDG GDY LP + RDP+ WD+ R N+GEP+ D +
Sbjct: 5 DYEPCSDDGMRYGDYLTLPDSSQQERDPWNDWDHADLRLNWGEPIHWDLDM 55
>gi|38569760|gb|AAR24398.1| NADH dehydrogenase 1 beta subcomplex 8 [Sus scrofa]
Length = 62
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
GDYP LP RDP+Y WD+P R N+GEP+ D +
Sbjct: 2 GDYPKLPDRSQQERDPWYDWDHPDLRLNWGEPIHWDLDM 40
>gi|444708262|gb|ELW49354.1| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
mitochondrial [Tupaia chinensis]
Length = 164
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
GDYP LP RDP+Y WD+ R N+GEP+ D +
Sbjct: 51 GDYPKLPDHSQQERDPWYDWDHSDLRMNWGEPIHWDLDM 89
>gi|313230446|emb|CBY18661.1| unnamed protein product [Oikopleura dioica]
gi|313240304|emb|CBY32648.1| unnamed protein product [Oikopleura dioica]
Length = 320
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 38 ERPKTEEERRKAAKKYNLLPEEYEVQPD--DGFATGDYPHLPHTHYDSRDPFYPWDYPMF 95
E T E + AKKY++LPE+Y G GDYP + Y ++D +Y WD
Sbjct: 61 ETDLTPEVIAEKAKKYDILPEDYVPMSVTYGGAYGGDYPTVAEEAYHNKDFYYEWDIMKH 120
Query: 96 RTNYGEPLP-NDFAISH 111
+ N+GE + +DF H
Sbjct: 121 KRNFGEIIGMHDFTHFH 137
>gi|392564415|gb|EIW57593.1| hypothetical protein TRAVEDRAFT_59226 [Trametes versicolor
FP-101664 SS1]
Length = 162
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 65 DDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPL 103
DD GDYP LP +R P W+ P FR NYGEPL
Sbjct: 44 DDDPQLGDYPRLPFVSKQTR-PALGWEDPQFRRNYGEPL 81
>gi|354492727|ref|XP_003508498.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 8, mitochondrial-like [Cricetulus griseus]
Length = 145
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAI 109
GDYP LP RDP+Y WD+ R N+GE + D +
Sbjct: 32 GDYPKLPDRSQQERDPWYEWDHSDLRLNWGETMHWDLDM 70
>gi|386822396|ref|ZP_10109611.1| RagB/SusD family protein [Joostella marina DSM 19592]
gi|386423642|gb|EIJ37473.1| RagB/SusD family protein [Joostella marina DSM 19592]
Length = 565
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 55 LLPEEYEVQPD--DGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTN---YGEPLPNDFAI 109
+L E + PD DGF T Y L + HYDS PF W Y R++ G PND +
Sbjct: 31 VLEENELINPDNIDGFVTAAYAALGNDHYDS--PFSLWPYGNVRSDDAYKGGSGPNDIQV 88
Query: 110 SHY 112
H+
Sbjct: 89 FHF 91
>gi|212546091|ref|XP_002153199.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210064719|gb|EEA18814.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 155
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%)
Query: 61 EVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQP 120
+ + DD G+YP+ P RDP W R N+GEP+ D I
Sbjct: 34 QAEDDDPHLNGNYPNPPAVKRQFRDPNADWWDKQERRNFGEPVHEDNDILGVFSPEKYTH 93
Query: 121 VNQRISVWEQLAYMVGILGTISLVLKYF 148
V ++ ++VGILG LV Y+
Sbjct: 94 VTSSKALLSIGTFVVGILGLCGLVSLYY 121
>gi|392595002|gb|EIW84326.1| hypothetical protein CONPUDRAFT_50068 [Coniophora puteana
RWD-64-598 SS2]
Length = 155
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 5/120 (4%)
Query: 41 KTEEERRKAAKKYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYG 100
+ R +++ ++ P+ Y Q D GDYP LP R P+ WD P R N+
Sbjct: 16 RASNSLRASSRAFHEPPKVYRAQEKDP-QLGDYPDLPWVSNQQRSPYGWWD-PQMRRNFN 73
Query: 101 EPL-PNDFAISHYGM-GFNEQPVNQRISVWEQLAYMVGILGTISLVLKYFCWEKRYYYPK 158
EP P+ M G + PV + ++ Q G + ++KY R P+
Sbjct: 74 EPASPSPLFCQLLSMWGPDVAPVPPQTAL-RQFLLAAGSFVSFGFLVKYALTPDRPAVPR 132
>gi|148692186|gb|EDL24133.1| mCG147828 [Mus musculus]
Length = 40
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 31 TPDWLPGERPKTEEERRKAAKKYNLLPEEYEVQPDDG 67
T LPG P+T EER A KK N+ E+ E PDDG
Sbjct: 2 TKAMLPGTYPRTPEERAAATKKCNMRVEDSEPFPDDG 38
>gi|156376712|ref|XP_001630503.1| predicted protein [Nematostella vectensis]
gi|156217525|gb|EDO38440.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 64 PDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQ 123
P DGF GDYP+LPH R F W R N+ EP+ D + + + E N
Sbjct: 59 PQDGFELGDYPNLPHVSSQRRQ-FEGWWDVQDRRNFNEPIHEDEDGLNIWL-WTEVECND 116
Query: 124 RISVWEQLAYMVGILGTISLV 144
+ + E L + + G + +V
Sbjct: 117 KYTPTEALTHWLTAFGLLGVV 137
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.139 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,306,225,525
Number of Sequences: 23463169
Number of extensions: 151991654
Number of successful extensions: 331935
Number of sequences better than 100.0: 189
Number of HSP's better than 100.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 331710
Number of HSP's gapped (non-prelim): 190
length of query: 176
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 44
effective length of database: 9,262,057,059
effective search space: 407530510596
effective search space used: 407530510596
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)