Your job contains 1 sequence.
>psy15236
MNKLRVLSQVKSLGKVVSLQQNSVRTAFVYTPDWLPGERPKTEEERRKAAKKYNLLPEEY
EVQPDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQP
VNQRISVWEQLAYMVGILGTISLVLKYFCWEKRYYYPKFDSPKYQKGVVHYGYHQK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15236
(176 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-1858 - symbol:ndufb8 "NADH dehydroge... 187 1.1e-14 1
UNIPROTKB|F1N858 - symbol:NDUFB8 "Uncharacterized protein... 185 1.8e-14 1
UNIPROTKB|Q5ZJW2 - symbol:NDUFB8 "Uncharacterized protein... 185 1.8e-14 1
RGD|1309129 - symbol:Ndufb8 "NADH dehydrogenase (ubiquino... 185 1.8e-14 1
UNIPROTKB|Q02372 - symbol:NDUFB8 "NADH dehydrogenase [ubi... 183 3.0e-14 1
UNIPROTKB|E9PQ68 - symbol:E9PQ68 "Uncharacterized protein... 182 3.8e-14 1
UNIPROTKB|F1RWL7 - symbol:NDUFB8 "Uncharacterized protein... 182 3.8e-14 1
FB|FBgn0029888 - symbol:CG3192 species:7227 "Drosophila m... 180 6.2e-14 1
UNIPROTKB|O95169 - symbol:NDUFB8 "NADH dehydrogenase [ubi... 180 6.2e-14 1
MGI|MGI:1914514 - symbol:Ndufb8 "NADH dehydrogenase (ubiq... 180 6.2e-14 1
UNIPROTKB|Q5W143 - symbol:NDUFB8 "cDNA FLJ52503, highly s... 177 1.3e-13 1
UNIPROTKB|E2RMG3 - symbol:NDUFB8 "Uncharacterized protein... 174 2.7e-13 1
UNIPROTKB|K9J7I2 - symbol:K9J7I2 "Uncharacterized protein... 173 3.4e-13 1
UNIPROTKB|Q5W145 - symbol:NDUFB8 "NADH dehydrogenase (Ubi... 172 4.4e-13 1
UNIPROTKB|F1MPN4 - symbol:F1MPN4 "Uncharacterized protein... 114 6.1e-07 1
WB|WBGene00013094 - symbol:Y51H1A.3 species:6239 "Caenorh... 112 1.7e-05 1
>ZFIN|ZDB-GENE-040426-1858 [details] [associations]
symbol:ndufb8 "NADH dehydrogenase (ubiquinone) 1
beta subcomplex, 8" species:7955 "Danio rerio" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008137 "NADH dehydrogenase
(ubiquinone) activity" evidence=IEA] [GO:0005747 "mitochondrial
respiratory chain complex I" evidence=IEA] [GO:0003954 "NADH
dehydrogenase activity" evidence=IEA] [GO:0006120 "mitochondrial
electron transport, NADH to ubiquinone" evidence=IEA]
InterPro:IPR008699 InterPro:IPR016551 Pfam:PF05821
PIRSF:PIRSF009288 ZFIN:ZDB-GENE-040426-1858 GO:GO:0005747
GO:GO:0008137 GO:GO:0006120 CTD:4714 eggNOG:NOG264830
GeneTree:ENSGT00390000000628 HOGENOM:HOG000012999
HOVERGEN:HBG000931 KO:K03964 OMA:EPIHWDL OrthoDB:EOG48GW47
PANTHER:PTHR12840 EMBL:CT583693 EMBL:CU468630 EMBL:BC062842
IPI:IPI00510723 RefSeq:NP_957149.1 UniGene:Dr.4264 STRING:Q6P5L5
Ensembl:ENSDART00000105176 GeneID:393829 KEGG:dre:393829
NextBio:20814817 Uniprot:Q6P5L5
Length = 188
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 38/104 (36%), Positives = 52/104 (50%)
Query: 6 VLSQVKSLGKVVSLQQ--NSVRTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQ 63
+L+ + GK S+ R A + D LPG YN+ PE+Y+
Sbjct: 8 LLTPALTKGKSSSISAIIRGARAASGSSKDSLPGPYPKTAEEKAAAAKKYNMRPEDYQPY 67
Query: 64 PDDGFATGDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDF 107
PDDG+ +GDYP LP RDP+Y WD+P R N+GEP+ F
Sbjct: 68 PDDGWGSGDYPMLPSRSQHERDPYYQWDHPDLRRNWGEPMHYHF 111
>UNIPROTKB|F1N858 [details] [associations]
symbol:NDUFB8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005747 "mitochondrial respiratory chain
complex I" evidence=IEA] [GO:0006120 "mitochondrial electron
transport, NADH to ubiquinone" evidence=IEA] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA]
InterPro:IPR008699 InterPro:IPR016551 Pfam:PF05821
PIRSF:PIRSF009288 GO:GO:0005747 GO:GO:0008137 GO:GO:0006120
GeneTree:ENSGT00390000000628 OMA:EPIHWDL PANTHER:PTHR12840
EMBL:AADN02027787 IPI:IPI00682372 Ensembl:ENSGALT00000009150
ArrayExpress:F1N858 Uniprot:F1N858
Length = 192
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 36/83 (43%), Positives = 43/83 (51%)
Query: 25 RTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSR 84
R A T D LPG YN+ E+Y+ PDDGF GDYP LP+ R
Sbjct: 33 RAASGLTKDQLPGPYPRTAEERAAAAKKYNMRVEDYQPYPDDGFGYGDYPMLPNKSIHER 92
Query: 85 DPFYPWDYPMFRTNYGEPLPNDF 107
DP+Y WD P R N+GEP+ DF
Sbjct: 93 DPWYQWDQPDMRRNWGEPMHWDF 115
>UNIPROTKB|Q5ZJW2 [details] [associations]
symbol:NDUFB8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005747 "mitochondrial respiratory chain
complex I" evidence=IEA] [GO:0006120 "mitochondrial electron
transport, NADH to ubiquinone" evidence=IEA] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA]
InterPro:IPR008699 InterPro:IPR016551 Pfam:PF05821
PIRSF:PIRSF009288 GO:GO:0005747 GO:GO:0008137 GO:GO:0006120
CTD:4714 eggNOG:NOG264830 GeneTree:ENSGT00390000000628
HOGENOM:HOG000012999 HOVERGEN:HBG000931 KO:K03964 OMA:EPIHWDL
OrthoDB:EOG48GW47 PANTHER:PTHR12840 EMBL:AADN02027787 EMBL:AJ720322
IPI:IPI00577539 RefSeq:NP_001006502.1 UniGene:Gga.8822
STRING:Q5ZJW2 Ensembl:ENSGALT00000033463 GeneID:423763
KEGG:gga:423763 InParanoid:Q5ZJW2 NextBio:20826184 Uniprot:Q5ZJW2
Length = 191
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 36/83 (43%), Positives = 43/83 (51%)
Query: 25 RTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSR 84
R A T D LPG YN+ E+Y+ PDDGF GDYP LP+ R
Sbjct: 32 RAASGLTKDQLPGPYPRTAEERAAAAKKYNMRVEDYQPYPDDGFGYGDYPMLPNKSIHER 91
Query: 85 DPFYPWDYPMFRTNYGEPLPNDF 107
DP+Y WD P R N+GEP+ DF
Sbjct: 92 DPWYQWDQPDMRRNWGEPMHWDF 114
>RGD|1309129 [details] [associations]
symbol:Ndufb8 "NADH dehydrogenase (ubiquinone) 1 beta subcomplex
8" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IEA;ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0006120
"mitochondrial electron transport, NADH to ubiquinone"
evidence=IEA] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR008699 InterPro:IPR016551 Pfam:PF05821
PIRSF:PIRSF009288 RGD:1309129 GO:GO:0005747 GO:GO:0008137
GO:GO:0006120 EMBL:CH473986 CTD:4714 eggNOG:NOG264830
GeneTree:ENSGT00390000000628 HOGENOM:HOG000012999
HOVERGEN:HBG000931 KO:K03964 OMA:EPIHWDL OrthoDB:EOG48GW47
PANTHER:PTHR12840 EMBL:AC103018 EMBL:BC166889 EMBL:BC166905
EMBL:BC166906 IPI:IPI00370372 RefSeq:NP_001099830.1 UniGene:Rn.3383
STRING:B2RYS8 Ensembl:ENSRNOT00000019039 GeneID:293991
KEGG:rno:293991 UCSC:RGD:1309129 NextBio:637366
Genevestigator:B2RYS8 Uniprot:B2RYS8
Length = 186
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 34/79 (43%), Positives = 42/79 (53%)
Query: 25 RTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSR 84
R AF T D +PG YN+ E+YE PDDG GDYP LP+ R
Sbjct: 27 RRAFHMTKDMMPGSYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPMLPNRSQHER 86
Query: 85 DPFYPWDYPMFRTNYGEPL 103
DP+Y WD+P R N+GEP+
Sbjct: 87 DPWYEWDHPDLRLNWGEPI 105
>UNIPROTKB|Q02372 [details] [associations]
symbol:NDUFB8 "NADH dehydrogenase [ubiquinone] 1 beta
subcomplex subunit 8, mitochondrial" species:9913 "Bos taurus"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0006120
"mitochondrial electron transport, NADH to ubiquinone"
evidence=IEA] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=IEA] InterPro:IPR008699 InterPro:IPR016551 Pfam:PF05821
PIRSF:PIRSF009288 GO:GO:0016021 TCDB:3.D.1.6.1 GO:GO:0005747
GO:GO:0008137 GO:GO:0006120 EMBL:X63209 EMBL:AY911318 EMBL:BC103425
IPI:IPI00711233 PIR:S28242 RefSeq:NP_777092.1 UniGene:Bt.57711
IntAct:Q02372 STRING:Q02372 PRIDE:Q02372 Ensembl:ENSBTAT00000000100
GeneID:282517 KEGG:bta:282517 CTD:4714 eggNOG:NOG264830
GeneTree:ENSGT00390000000628 HOGENOM:HOG000012999
HOVERGEN:HBG000931 InParanoid:Q02372 KO:K03964 OMA:EPIHWDL
OrthoDB:EOG48GW47 NextBio:20806267 PANTHER:PTHR12840 Uniprot:Q02372
Length = 186
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 55/166 (33%), Positives = 71/166 (42%)
Query: 11 KSLGKVVSLQQNSVRTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFAT 70
K+ VV L RTA T D LPG YN+ E+YE PDDG
Sbjct: 16 KAARNVVPL---GARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGTGY 72
Query: 71 GDYPHLPHTHYDSRDPFYPWDYPMFRTNYGEPLPNDFAIS-HYGMGFNEQPVNQRISVWE 129
GDYP LP RDP+Y WD+P R N+GEP+ D + + + PVN W
Sbjct: 73 GDYPKLPDRSQQERDPWYDWDHPDLRLNWGEPMHWDLDMYIRNRVDTSPTPVN-----WN 127
Query: 130 QLAYMVGILGTISLVLKYFCWEKRYYYPKFDSPKYQK-GVVHYGYH 174
+ + G ++ +L F W Y P YQ G Y Y+
Sbjct: 128 LMCKH--LFGFVAFMLFMF-WVGETY------PAYQPVGPKQYPYN 164
>UNIPROTKB|E9PQ68 [details] [associations]
symbol:E9PQ68 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR008699 Pfam:PF05821 GO:GO:0005739 GO:GO:0008137
EMBL:AL133352 PANTHER:PTHR12840 PRIDE:E9PQ68
Ensembl:ENST00000529568 ArrayExpress:E9PQ68 Uniprot:E9PQ68
Length = 159
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 44/140 (31%), Positives = 59/140 (42%)
Query: 25 RTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSR 84
RTA T D PG YN+ E+YE PDDG GDYP LP R
Sbjct: 27 RTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHER 86
Query: 85 DPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLV 144
DP+Y WD P R N+GEP+ + + Y N + W + + G ++ +
Sbjct: 87 DPWYSWDQPGLRLNWGEPM--HWHLDMYNR--NRVDTSPTPVSWHVMCMQ--LFGFLAFM 140
Query: 145 LKYFCWEKRYY--YPKFDSP 162
+ + CW Y Y D P
Sbjct: 141 I-FMCWVGDVYPVYQPVDRP 159
>UNIPROTKB|F1RWL7 [details] [associations]
symbol:NDUFB8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0006120 "mitochondrial electron transport, NADH
to ubiquinone" evidence=IEA] [GO:0005747 "mitochondrial respiratory
chain complex I" evidence=IEA] InterPro:IPR008699
InterPro:IPR016551 Pfam:PF05821 PIRSF:PIRSF009288 GO:GO:0005747
GO:GO:0008137 GO:GO:0006120 GeneTree:ENSGT00390000000628
OMA:EPIHWDL PANTHER:PTHR12840 EMBL:FP236645
Ensembl:ENSSSCT00000006760 ArrayExpress:F1RWL7 Uniprot:F1RWL7
Length = 186
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 38/89 (42%), Positives = 44/89 (49%)
Query: 15 KVVSLQQNSVRTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYP 74
KVV L RTA T D PG YN+ E+YE PDDG GDYP
Sbjct: 20 KVVPL---GARTASHVTKDMFPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYP 76
Query: 75 HLPHTHYDSRDPFYPWDYPMFRTNYGEPL 103
LP RDP+Y WD+P R N+GEP+
Sbjct: 77 KLPDRSQQERDPWYDWDHPDLRLNWGEPI 105
>FB|FBgn0029888 [details] [associations]
symbol:CG3192 species:7227 "Drosophila melanogaster"
[GO:0005747 "mitochondrial respiratory chain complex I"
evidence=ISS] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=ISS] [GO:0003954 "NADH dehydrogenase activity"
evidence=ISS] [GO:0006120 "mitochondrial electron transport, NADH
to ubiquinone" evidence=ISS] InterPro:IPR008699 InterPro:IPR016551
Pfam:PF05821 PIRSF:PIRSF009288 EMBL:AE014298 GO:GO:0005747
GO:GO:0008137 GO:GO:0006120 GeneTree:ENSGT00390000000628 KO:K03964
PANTHER:PTHR12840 EMBL:BT120041 RefSeq:NP_001027048.1
RefSeq:NP_572338.1 UniGene:Dm.11606 MINT:MINT-895943 STRING:Q9W3X7
EnsemblMetazoa:FBtr0070990 EnsemblMetazoa:FBtr0100409 GeneID:31604
KEGG:dme:Dmel_CG3192 UCSC:CG3192-RA FlyBase:FBgn0029888
InParanoid:Q9W3X7 OMA:MSALMKS OrthoDB:EOG4HHMJK GenomeRNAi:31604
NextBio:774418 Uniprot:Q9W3X7
Length = 175
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 45/156 (28%), Positives = 69/156 (44%)
Query: 21 QNSVRTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPH-T 79
+ ++R+ + D+ PG Y LLPEEY+ DDG GDYP L +
Sbjct: 23 RQAIRSMAGWNKDYKPGPYPQTEKERLAAAKKYYLLPEEYKPYADDGLGYGDYPKLGYGL 82
Query: 80 HYDSRDPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILG 139
+++D +YPWDYP + N EP+ D + +P R S A +G++
Sbjct: 83 GVEAKDSYYPWDYPEHKRNQHEPISADHDLYSEDRWSQAEP--PRYSNAYYFACFLGVMS 140
Query: 140 TISLVLKYFCWEKRYYYPKFDSPKYQKGVVHYGYHQ 175
L L Y+ +K+ Y P GV HY + +
Sbjct: 141 GC-LALYYWLDDKKMYRPVAAKQYPSPGVKHYTFEK 175
>UNIPROTKB|O95169 [details] [associations]
symbol:NDUFB8 "NADH dehydrogenase [ubiquinone] 1 beta
subcomplex subunit 8, mitochondrial" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006120
"mitochondrial electron transport, NADH to ubiquinone"
evidence=NAS] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=NAS] [GO:0005747 "mitochondrial respiratory
chain complex I" evidence=IDA;NAS] [GO:0005743 "mitochondrial inner
membrane" evidence=TAS] [GO:0022904 "respiratory electron transport
chain" evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] Reactome:REACT_111217
InterPro:IPR008699 InterPro:IPR016551 Pfam:PF05821
PIRSF:PIRSF009288 GO:GO:0005783 GO:GO:0016021 DrugBank:DB00157
GO:GO:0044281 EMBL:CH471066 GO:GO:0005747 GO:GO:0008137
GO:GO:0006120 EMBL:AL133352 CTD:4714 eggNOG:NOG264830
HOGENOM:HOG000012999 HOVERGEN:HBG000931 KO:K03964 OMA:EPIHWDL
OrthoDB:EOG48GW47 PANTHER:PTHR12840 EMBL:AF044958 EMBL:AF115968
EMBL:AF077028 EMBL:AL080056 EMBL:CR533490 EMBL:AK289579
EMBL:BC000466 EMBL:BC019276 EMBL:Y18944 IPI:IPI00028883 PIR:JE0382
RefSeq:NP_004995.1 UniGene:Hs.523215 ProteinModelPortal:O95169
IntAct:O95169 MINT:MINT-1371340 STRING:O95169 PhosphoSite:O95169
PaxDb:O95169 PRIDE:O95169 DNASU:4714 Ensembl:ENST00000299166
GeneID:4714 KEGG:hsa:4714 UCSC:uc001kri.1 GeneCards:GC10M102273
HGNC:HGNC:7703 HPA:HPA003886 MIM:602140 neXtProt:NX_O95169
PharmGKB:PA31514 InParanoid:O95169 PhylomeDB:O95169 GenomeRNAi:4714
NextBio:18182 ArrayExpress:O95169 Bgee:O95169 CleanEx:HS_NDUFB8
Genevestigator:O95169 GermOnline:ENSG00000166136 Uniprot:O95169
Length = 186
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 47/151 (31%), Positives = 63/151 (41%)
Query: 25 RTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSR 84
RTA T D PG YN+ E+YE PDDG GDYP LP R
Sbjct: 27 RTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHER 86
Query: 85 DPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLV 144
DP+Y WD P R N+GEP+ + + Y N + W + + G ++ +
Sbjct: 87 DPWYSWDQPGLRLNWGEPM--HWHLDMYNR--NRVDTSPTPVSWHVMCMQ--LFGFLAFM 140
Query: 145 LKYFCWEKRYYYPKFDSPKYQK-GVVHYGYH 174
+ + CW Y P YQ G Y Y+
Sbjct: 141 I-FMCWVGDVY------PVYQPVGPKQYPYN 164
>MGI|MGI:1914514 [details] [associations]
symbol:Ndufb8 "NADH dehydrogenase (ubiquinone) 1 beta
subcomplex 8" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003954 "NADH dehydrogenase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IDA]
[GO:0005747 "mitochondrial respiratory chain complex I"
evidence=ISO] [GO:0006120 "mitochondrial electron transport, NADH
to ubiquinone" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0070469 "respiratory chain" evidence=IEA]
InterPro:IPR008699 InterPro:IPR016551 Pfam:PF05821
PIRSF:PIRSF009288 MGI:MGI:1914514 GO:GO:0016021 GO:GO:0005743
GO:GO:0005747 GO:GO:0008137 GO:GO:0006120 CTD:4714 eggNOG:NOG264830
GeneTree:ENSGT00390000000628 HOGENOM:HOG000012999
HOVERGEN:HBG000931 KO:K03964 OMA:EPIHWDL OrthoDB:EOG48GW47
PANTHER:PTHR12840 EMBL:AK010177 EMBL:AK013516 EMBL:BC043019
IPI:IPI00387430 RefSeq:NP_080337.1 UniGene:Mm.2060
ProteinModelPortal:Q9D6J5 IntAct:Q9D6J5 STRING:Q9D6J5
PhosphoSite:Q9D6J5 PaxDb:Q9D6J5 PRIDE:Q9D6J5
Ensembl:ENSMUST00000026222 GeneID:67264 KEGG:mmu:67264
UCSC:uc008hpw.1 InParanoid:Q9D6J5 ChiTaRS:NDUFB8 NextBio:324046
Bgee:Q9D6J5 Genevestigator:Q9D6J5 GermOnline:ENSMUSG00000025204
Uniprot:Q9D6J5
Length = 186
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 34/79 (43%), Positives = 41/79 (51%)
Query: 25 RTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSR 84
R AF T D LPG YN+ E+YE PDDG GDYP LP+ R
Sbjct: 27 RRAFHMTKDMLPGSYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPMLPNRSQHER 86
Query: 85 DPFYPWDYPMFRTNYGEPL 103
DP+Y WD+ R N+GEP+
Sbjct: 87 DPWYQWDHSELRMNWGEPI 105
>UNIPROTKB|Q5W143 [details] [associations]
symbol:NDUFB8 "cDNA FLJ52503, highly similar to NADH
dehydrogenase (ubiquinone) 1 beta subcomplex subunit 8,
mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone
oxidoreductase ASHI subunit) (Complex I-ASHI) (CI-ASHI)"
species:9606 "Homo sapiens" [GO:0008137 "NADH dehydrogenase
(ubiquinone) activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR008699 Pfam:PF05821 GO:GO:0005739
GO:GO:0008137 EMBL:AL133352 HOGENOM:HOG000012999 HOVERGEN:HBG000931
PANTHER:PTHR12840 UniGene:Hs.523215 HGNC:HGNC:7703 EMBL:AK295867
IPI:IPI00479154 STRING:Q5W143 Ensembl:ENST00000370320
Ensembl:ENST00000531258 Ensembl:ENST00000557395 Uniprot:Q5W143
Length = 172
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 40/126 (31%), Positives = 55/126 (43%)
Query: 25 RTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSR 84
RTA T D PG YN+ E+YE PDDG GDYP LP R
Sbjct: 27 RTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHER 86
Query: 85 DPFYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLV 144
DP+Y WD P R N+GEP+ + + Y N + W + + G ++ +
Sbjct: 87 DPWYSWDQPGLRLNWGEPM--HWHLDMYNR--NRVDTSPTPVSWHVMCMQ--LFGFLAFM 140
Query: 145 LKYFCW 150
+ + CW
Sbjct: 141 I-FMCW 145
>UNIPROTKB|E2RMG3 [details] [associations]
symbol:NDUFB8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0006120 "mitochondrial electron
transport, NADH to ubiquinone" evidence=IEA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IEA]
InterPro:IPR008699 InterPro:IPR016551 Pfam:PF05821
PIRSF:PIRSF009288 GO:GO:0005747 GO:GO:0008137 GO:GO:0006120
CTD:4714 GeneTree:ENSGT00390000000628 KO:K03964 OMA:EPIHWDL
PANTHER:PTHR12840 EMBL:AAEX03015468 RefSeq:XP_534992.1
Ensembl:ENSCAFT00000037266 GeneID:477798 KEGG:cfa:477798
Uniprot:E2RMG3
Length = 186
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 34/79 (43%), Positives = 40/79 (50%)
Query: 25 RTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSR 84
RTA T D LPG YN+ E+YE PDDG GDYP LP R
Sbjct: 27 RTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQQER 86
Query: 85 DPFYPWDYPMFRTNYGEPL 103
DP+Y WD+ R N+GEP+
Sbjct: 87 DPWYNWDHSDLRLNWGEPM 105
>UNIPROTKB|K9J7I2 [details] [associations]
symbol:K9J7I2 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008137
"NADH dehydrogenase (ubiquinone) activity" evidence=IEA]
InterPro:IPR008699 Pfam:PF05821 EMBL:AL133352 PANTHER:PTHR12840
Ensembl:ENST00000527595 Uniprot:K9J7I2
Length = 107
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 34/78 (43%), Positives = 38/78 (48%)
Query: 25 RTAFVYTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSR 84
RTA T D PG YN+ E+YE PDDG GDYP LP R
Sbjct: 27 RTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHER 86
Query: 85 DPFYPWDYPMFRTNYGEP 102
DP+Y WD P R N+GEP
Sbjct: 87 DPWYSWDQPGLRLNWGEP 104
>UNIPROTKB|Q5W145 [details] [associations]
symbol:NDUFB8 "NADH dehydrogenase (Ubiquinone) 1 beta
subcomplex, 8, 19kDa, isoform CRA_a" species:9606 "Homo sapiens"
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR008699 Pfam:PF05821 GO:GO:0005739 EMBL:CH471066
GO:GO:0008137 EMBL:AL133352 HOGENOM:HOG000012999 HOVERGEN:HBG000931
PANTHER:PTHR12840 UniGene:Hs.523215 HGNC:HGNC:7703 IPI:IPI00642807
Ensembl:ENST00000370322 Uniprot:Q5W145
Length = 155
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 44/145 (30%), Positives = 60/145 (41%)
Query: 31 TPDWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPW 90
T D PG YN+ E+YE PDDG GDYP LP RDP+Y W
Sbjct: 2 TKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSW 61
Query: 91 DYPMFRTNYGEPLPNDFAISHYGMGFNEQPVNQRISVWEQLAYMVGILGTISLVLKYFCW 150
D P R N+GEP+ + + Y N + W + + G ++ ++ + CW
Sbjct: 62 DQPGLRLNWGEPM--HWHLDMYNR--NRVDTSPTPVSWHVMCMQ--LFGFLAFMI-FMCW 114
Query: 151 EKRYYYPKFDSPKYQK-GVVHYGYH 174
Y P YQ G Y Y+
Sbjct: 115 VGDVY------PVYQPVGPKQYPYN 133
>UNIPROTKB|F1MPN4 [details] [associations]
symbol:F1MPN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR008699 Pfam:PF05821 GO:GO:0005739 GO:GO:0008137
GeneTree:ENSGT00390000000628 PANTHER:PTHR12840 EMBL:DAAA02028729
IPI:IPI00702271 Ensembl:ENSBTAT00000001866 Uniprot:F1MPN4
Length = 154
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 24/70 (34%), Positives = 31/70 (44%)
Query: 33 DWLPGXXXXXXXXXXXXXXXYNLLPEEYEVQPDDGFATGDYPHLPHTHYDSRDPFYPWDY 92
D LPG YN+ E+ E DDG G+Y P + RDP+ WD+
Sbjct: 19 DVLPGPYPKTLEEQVTIAKKYNMQVEDEEPWLDDGMGYGNYLKFPDSSQQERDPWCDWDH 78
Query: 93 PMFRTNYGEP 102
P N+GEP
Sbjct: 79 PDLMLNWGEP 88
>WB|WBGene00013094 [details] [associations]
symbol:Y51H1A.3 species:6239 "Caenorhabditis elegans"
[GO:0003954 "NADH dehydrogenase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008137 "NADH dehydrogenase
(ubiquinone) activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR008699 Pfam:PF05821 GO:GO:0005739
GO:GO:0009792 GO:GO:0018996 GO:GO:0008137 eggNOG:NOG264830
GeneTree:ENSGT00390000000628 KO:K03964 PANTHER:PTHR12840
EMBL:AL032644 PIR:T27098 RefSeq:NP_496908.1
ProteinModelPortal:Q9XWJ5 PaxDb:Q9XWJ5 PRIDE:Q9XWJ5
EnsemblMetazoa:Y51H1A.3b.1 EnsemblMetazoa:Y51H1A.3b.2 GeneID:175038
KEGG:cel:CELE_Y51H1A.3 UCSC:Y51H1A.3a CTD:175038 WormBase:Y51H1A.3b
HOGENOM:HOG000021893 InParanoid:Q9XWJ5 OMA:RWKNPAM NextBio:886508
ArrayExpress:Q9XWJ5 Uniprot:Q9XWJ5
Length = 215
Score = 112 (44.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/123 (27%), Positives = 52/123 (42%)
Query: 30 YTPDWLPGXXXXXXXXXXXXXXXYNLLPEEYE-VQPDD--GFATGDYPHLPHTHYDSRDP 86
Y D P Y L PE+Y+ + DD FA GDYP L YD +DP
Sbjct: 50 YPRDHKPSAPPTNEEERRAAAVKYGLRPEDYQSMDKDDVIKFA-GDYPDLGVITYDHKDP 108
Query: 87 FYPWDYPMFRTNYGEPLPNDFAISHYGMGFNEQPVN-QRISVWEQLAYMVGILGTISLVL 145
+ W R N+GE +P D + + G + + + W + + +L ++L+
Sbjct: 109 YEAWTDRQNRRNWGELVPIDM-MRYRGDRLTFTGLEAEDYTTWNSIVMCLRVLVPMALLA 167
Query: 146 KYF 148
YF
Sbjct: 168 WYF 170
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.141 0.463 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 176 161 0.00074 107 3 11 22 0.38 32
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 606 (64 KB)
Total size of DFA: 184 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 13.76u 0.07s 13.83t Elapsed: 00:00:03
Total cpu time: 13.76u 0.07s 13.83t Elapsed: 00:00:05
Start: Thu Aug 15 17:07:24 2013 End: Thu Aug 15 17:07:29 2013