Diaphorina citri psyllid: psy1523

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
MVVVKNNNTNNNTNNNTNNNTNNNNNHNVLVGSIVEIILVSYRIGEKGDVKILYRESWDRKTSAPGAAVSGPPTLSPSSLDATADPSLHAAAMDREVHKTFNPEARVFRPVEVCLASLSLNGEERSASPSPTKGSPTFLPRSTAPLTFTTASFAQTKFGSTKLKTNSKRTNRGEPLSKDYNYILDVYCYY
cEEEEcccccccccccccccccccccccEEEEcEEEEEEEEEEEcccccEEEEEEEccccccccccccccccccccccccccccccccccccccHHHHccccccccEEEcccccccccccccccccccccccccccccccccccccEEEcHHHHHccccccccccccccccccccccccccEEEEEEEEc
*V**********************NNHNVLVGSIVEIILVSYRIGEKGDVKILYRESW*******************************************NPEARVFRPVEV*****************************TAPLTFTTASFAQT**********************DYNYILDVYCYY
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MVVVKNNNTNNNTNNNTNNNTNNNNNHNVLVGSIVEIILVSYRIGEKGDVKILYRESWDRKTSAPGAAVSGPPTLSPSSLDATADPSLHAAAMDREVHKTFNPEARVFRPVEVCLASLSLNGEERSASPSPTKGSPTFLPRSTAPLTFTTASFAQTKFGSTKLKTNSKRTNRGEPLSKDYNYILDVYCYY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0060212 [BP]negative regulation of nuclear-transcribed mRNA poly(A) tail shorteningprobableGO:0009894, GO:0009895, GO:0009892, GO:0080090, GO:0031329, GO:0050684, GO:0031324, GO:0031323, GO:0050789, GO:0010605, GO:0019222, GO:0060255, GO:0065007, GO:1900151, GO:0048519, GO:0010468, GO:0050686, GO:0045934, GO:0031330, GO:0061013, GO:0050794, GO:0060211, GO:0008150, GO:0051171, GO:0051172, GO:0031440, GO:0031441, GO:0051253, GO:0051252, GO:0019219, GO:0048523

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2Z15, chain A
Confidence level:confident
Coverage over the Query: 26-58
View the alignment between query and template
View the model in PyMOL