RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1524
(592 letters)
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 76.2 bits (186), Expect = 1e-16
Identities = 41/247 (16%), Positives = 75/247 (30%), Gaps = 75/247 (30%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQSG 123
K VV+G VGK+ ++ + N F +Y T+ D V
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-----FDNYAVTVM-------------- 45
Query: 124 KGLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEFPAMRA 183
G + + L T ++ +R
Sbjct: 46 ---------IGGEPYTLGLFD---------------------------TAGQEDYDRLRP 69
Query: 184 LSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQVDL 243
LS D F++ +++ P+SFE ++ P ++VG + DL D+ ++
Sbjct: 70 LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQIDLRDDPSTIE- 127
Query: 244 TGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNITQVF 303
+ +T E + + +VE SA + VF
Sbjct: 128 ------------------KLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169
Query: 304 KELLVQA 310
E ++ A
Sbjct: 170 DEAILAA 176
Score = 38.1 bits (87), Expect = 0.001
Identities = 13/58 (22%), Positives = 23/58 (39%)
Query: 320 LRRRRRQSLPPVQHSPNPVPYDTTESVVQVDWENGFVEASAKDNTNITQVFKELLVQA 377
LR ++ P+ +T E + + +VE SA + VF E ++ A
Sbjct: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 71.8 bits (175), Expect = 4e-15
Identities = 37/248 (14%), Positives = 68/248 (27%), Gaps = 76/248 (30%)
Query: 60 DTRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSG 119
D K++ +G VGK++ ++R+ N F+PK+ T+
Sbjct: 3 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFR------------------- 43
Query: 120 EQSGKGLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEFP 179
+ V G + L T F
Sbjct: 44 -------EKRVVYNAQGPNGSSGKAFKVHLQLW------------------DTAGQERFR 78
Query: 180 AMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENR 239
++ A F+L++ + SF +R + IV++GNK+DL D+
Sbjct: 79 SLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQRE 138
Query: 240 QVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNI 299
+ + + E SA N+
Sbjct: 139 VNERQARELAD--------------------------------KYGIPYFETSAATGQNV 166
Query: 300 TQVFKELL 307
+ + LL
Sbjct: 167 EKAVETLL 174
Score = 32.9 bits (74), Expect = 0.058
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 350 DWENGFVEASAKDNTNITQVFKELL 374
+ + E SA N+ + + LL
Sbjct: 150 KYGIPYFETSAATGQNVEKAVETLL 174
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 69.4 bits (169), Expect = 2e-14
Identities = 51/254 (20%), Positives = 89/254 (35%), Gaps = 96/254 (37%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIE-EMHHEDFSMNGVHLKLDILDTSGEQS 122
K++++G VGKS ++ RF+ + F+P + TI + + +NG +KL I DT+G++
Sbjct: 4 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQER 63
Query: 123 GKGLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEFPAMR 182
+ + Y+
Sbjct: 64 FRTI-------------------------TTAYYR------------------------- 73
Query: 183 ALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQVD 242
A ILVY I D +F I+ A+ +++VGNKSD
Sbjct: 74 -----GAMGIILVYDITDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSD--------- 118
Query: 243 LTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENG--FVEASAKDNTNIT 300
+ T + + E G F+E+SAK++ N+
Sbjct: 119 --------------------------METRVVTADQGEALAKELGIPFIESSAKNDDNVN 152
Query: 301 QVFKEL--LVQAKV 312
++F L L+Q K+
Sbjct: 153 EIFFTLAKLIQEKI 166
Score = 33.6 bits (76), Expect = 0.028
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 340 YDTTESVVQVDWENG--FVEASAKDNTNITQVFKEL--LVQAKV 379
T + + E G F+E+SAK++ N+ ++F L L+Q K+
Sbjct: 123 VVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 166
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 64.9 bits (157), Expect = 1e-12
Identities = 48/273 (17%), Positives = 91/273 (33%), Gaps = 94/273 (34%)
Query: 60 DTRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHH-EDFSMNGVHLKLDILDTS 118
D K++++G VGKS ++ RF +T++ Y TI + ++G +KL I DT+
Sbjct: 4 DYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTA 63
Query: 119 GEQSGKGLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEF 178
G++ + + Y+
Sbjct: 64 GQERFRTI-------------------------TSSYYR--------------------- 77
Query: 179 PAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADEN 238
+ I+VY + D SF +++ I ST V ++VGNK D
Sbjct: 78 ---------GSHGIIIVYDVTDQESFNGVKMWLQEIDRYATST-VLKLLVGNKCD----- 122
Query: 239 RQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWEN-GFVEASAKDNT 297
D+ + + D F+E SA D+T
Sbjct: 123 ----------------------------LKDKRVVEYDVAKEFADANKMPFLETSALDST 154
Query: 298 NITQVFKEL---LVQAKVKYNLSPALRRRRRQS 327
N+ F + + ++ + NL+ +++ +
Sbjct: 155 NVEDAFLTMARQIKESMSQQNLNETTQKKEDKG 187
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 63.2 bits (153), Expect = 2e-12
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 60 DTRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHH-EDFSMNGVHLKLDILDTS 118
D K++++G VGK+ ++ RF + F+ + TI ++G +KL I DT+
Sbjct: 4 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 63
Query: 119 G 119
G
Sbjct: 64 G 64
Score = 51.3 bits (122), Expect = 3e-08
Identities = 26/146 (17%), Positives = 44/146 (30%), Gaps = 37/146 (25%)
Query: 172 TCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNK 231
T F + A +LVY I + SF+ IR +I E ++ +++
Sbjct: 62 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKC 121
Query: 232 SDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENG--FV 289
+ + E ++ + G F+
Sbjct: 122 -----------------------------------DVNDKRQVSKERGEKLALDYGIKFM 146
Query: 290 EASAKDNTNITQVFKELLVQAKVKYN 315
E SAK N N+ F L K K +
Sbjct: 147 ETSAKANINVENAFFTLARDIKAKMD 172
Score = 34.0 bits (77), Expect = 0.023
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQAKVKYN 382
D+ F+E SAK N N+ F L K K +
Sbjct: 140 DYGIKFMETSAKANINVENAFFTLARDIKAKMD 172
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 62.5 bits (151), Expect = 5e-12
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 60 DTRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHE-DFSMNGVHLKLDILDTS 118
D K+V++G VGK+ ++ RF F P TI +NG +KL I DT+
Sbjct: 3 DFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTA 62
Query: 119 GEQSGKGL 126
G++ + +
Sbjct: 63 GQERFRSI 70
Score = 33.6 bits (76), Expect = 0.028
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQA 377
+ ++E SAK++ N+ ++F +L +
Sbjct: 139 AQDMYYLETSAKESDNVEKLFLDLACRL 166
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 60.8 bits (146), Expect = 2e-11
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 62 RHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQ 121
R K+V++G GK+ ++ + F Y T+ E + D ++G ++L + DT+G +
Sbjct: 2 RKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLE 61
Score = 34.6 bits (78), Expect = 0.015
Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 20/136 (14%)
Query: 171 MTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGN 230
T ++ +R LS D ++ ++ID P+S E I + VPI++VGN
Sbjct: 56 DTAGLEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGN 114
Query: 231 KSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVE 290
K DL ++ + + V + + G++E
Sbjct: 115 KKDLRND-------------------EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYME 155
Query: 291 ASAKDNTNITQVFKEL 306
SAK + +VF+
Sbjct: 156 CSAKTKDGVREVFEMA 171
Score = 33.4 bits (75), Expect = 0.038
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 332 QHSPNPVPYDTTESVVQVDWENGFVEASAKDNTNITQVFKEL 373
+ PV + + G++E SAK + +VF+
Sbjct: 130 KMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMA 171
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 59.6 bits (143), Expect = 4e-11
Identities = 47/244 (19%), Positives = 84/244 (34%), Gaps = 89/244 (36%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTI-EEMHHEDFSMNGVHLKLDILDTSGEQS 122
K+V +G VGK+S+I RF+Y++F Y+ TI + + + ++L + DT+G++
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE- 60
Query: 123 GKGLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEFPAMR 182
R + P +
Sbjct: 61 ------------------------RFRSLIPSYIRDSAA--------------------- 75
Query: 183 ALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQVD 242
++VY I + NSF++ D + T+ + V I++VGNK+DLAD
Sbjct: 76 ---------AVVVYDITNVNSFQQTTKWIDDV-RTERGSDVIIMLVGNKTDLAD------ 119
Query: 243 LTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNITQV 302
+ + F+E SAK N+ Q+
Sbjct: 120 --------------------------KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQL 153
Query: 303 FKEL 306
F+ +
Sbjct: 154 FRRV 157
Score = 34.2 bits (77), Expect = 0.021
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 350 DWENGFVEASAKDNTNITQVFKEL 373
+ F+E SAK N+ Q+F+ +
Sbjct: 134 ELNVMFIETSAKAGYNVKQLFRRV 157
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 59.2 bits (142), Expect = 7e-11
Identities = 42/255 (16%), Positives = 72/255 (28%), Gaps = 89/255 (34%)
Query: 60 DTRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHE-DFSMNGVHLKLDILDTS 118
D K +V+G GKS ++H+F+ F TI ++ G ++KL I DT+
Sbjct: 3 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 62
Query: 119 GEQSGKGLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEF 178
G++ R + Y+
Sbjct: 63 GQE-------------------------RFRSVTRSYYRG-------------------- 77
Query: 179 PAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADEN 238
A +LVY I ++ + + + I++ GNK DL +
Sbjct: 78 ----------AAGALLVYDITSRETYNALTNWLTDARMLASQN-IVIILCGNKKDLDADR 126
Query: 239 RQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTN 298
L F + E F+E SA N
Sbjct: 127 EVTFLEASRFAQ--------------------------------ENELMFLETSALTGEN 154
Query: 299 ITQVFKELLVQAKVK 313
+ + F + + K
Sbjct: 155 VEEAFVQCARKILNK 169
Score = 32.2 bits (72), Expect = 0.086
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQAKVK 380
+ E F+E SA N+ + F + + K
Sbjct: 139 ENELMFLETSALTGENVEEAFVQCARKILNK 169
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 57.2 bits (137), Expect = 3e-10
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 60 DTRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHH-EDFSMNGVHLKLDILDTS 118
D K++++G VGK+S + R+ ++F+P + T+ + N +KL I DT+
Sbjct: 3 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 62
Query: 119 G 119
G
Sbjct: 63 G 63
Score = 40.2 bits (93), Expect = 2e-04
Identities = 28/136 (20%), Positives = 43/136 (31%), Gaps = 33/136 (24%)
Query: 172 TCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNK 231
T + + A FIL+Y I + SF ++ I +++VGNK
Sbjct: 61 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDN-AQVLLVGNK 119
Query: 232 SDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEA 291
D ++V + F EA
Sbjct: 120 CD--------------------------------MEDERVVSSERGRQLADHLGFEFFEA 147
Query: 292 SAKDNTNITQVFKELL 307
SAKDN N+ Q F+ L+
Sbjct: 148 SAKDNINVKQTFERLV 163
Score = 32.9 bits (74), Expect = 0.055
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 350 DWENGFVEASAKDNTNITQVFKELL 374
F EASAKDN N+ Q F+ L+
Sbjct: 139 HLGFEFFEASAKDNINVKQTFERLV 163
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 57.2 bits (137), Expect = 4e-10
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIE-EMHHEDFSMNGVHLKLDILDTSG 119
K++++G VGKSS++ RF +TF P+ TI + + S++G KL I DT+G
Sbjct: 9 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 65
Score = 32.5 bits (73), Expect = 0.078
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 350 DWENGFVEASAKDNTNITQVFKELL 374
F+EASAK + F+EL+
Sbjct: 141 KHSMLFIEASAKTCDGVQCAFEELV 165
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 56.2 bits (134), Expect = 6e-10
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDI 114
K+ + G VGKS+++ RFL F +Y T+E + +++ + ++I
Sbjct: 4 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEI 54
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 56.1 bits (134), Expect = 8e-10
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 58 GHDTRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEM-HHEDFSMNGVHLKLDILD 116
G + KV+++G VGKSS+++R++ N F + TI ++D ++G + + I D
Sbjct: 2 GKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWD 61
Query: 117 TSGEQSGKGL 126
T+G++ + L
Sbjct: 62 TAGQERFRSL 71
Score = 41.5 bits (96), Expect = 7e-05
Identities = 25/142 (17%), Positives = 53/142 (37%), Gaps = 35/142 (24%)
Query: 169 LAMTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHI---FETKASTAVPI 225
+ T F ++R +D +L +++DD SF+ + + + K + P
Sbjct: 59 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF 118
Query: 226 VVVGNKSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWE 285
V++GNK D+++ + ++ + + +
Sbjct: 119 VILGNKIDISERQV--------------------------------STEEAQAWCRDNGD 146
Query: 286 NGFVEASAKDNTNITQVFKELL 307
+ E SAKD TN+ F+E +
Sbjct: 147 YPYFETSAKDATNVAAAFEEAV 168
Score = 34.2 bits (77), Expect = 0.022
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 351 WENGFVEASAKDNTNITQVFKELL 374
+ + E SAKD TN+ F+E +
Sbjct: 145 GDYPYFETSAKDATNVAAAFEEAV 168
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 55.6 bits (133), Expect = 9e-10
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 57 EGHDTRHKVVVMGGPKVGKSSIIHRFLYNTFSPK-YKRTIEEMHHE-DFSMNGVHLKLDI 114
+ +D KV+++G VGK+ ++ RF F + T+ ++GV +KL +
Sbjct: 1 DFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQM 60
Query: 115 LDTSGEQSGKGL 126
DT+G++ + +
Sbjct: 61 WDTAGQERFRSV 72
Score = 32.5 bits (73), Expect = 0.065
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 350 DWENGFVEASAKDNTNITQVFKELL 374
++ F+E SAK N+ F +
Sbjct: 141 EYGLPFMETSAKTGLNVDLAFTAIA 165
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 55.1 bits (131), Expect = 2e-09
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEE-MHHEDFSMNGVHLKLDILDTSG 119
KV+++G VGK+S++++++ FS +YK TI ++ ++ + + I DT+G
Sbjct: 4 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 60
Score = 34.3 bits (77), Expect = 0.018
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 11/80 (13%)
Query: 259 VCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNITQVFKELLVQAKVKYNLSP 318
V ++I QV ++ + E SAK+ N+ Q F+ + A
Sbjct: 116 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA-------- 167
Query: 319 ALRRRRRQSLPPVQHSPNPV 338
++ + P P+
Sbjct: 168 ---LKQETEVELYNEFPEPI 184
Score = 32.4 bits (72), Expect = 0.090
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQA 377
+ E SAK+ N+ Q F+ + A
Sbjct: 140 KNNIPYFETSAKEAINVEQAFQTIARNA 167
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 54.5 bits (130), Expect = 3e-09
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 60 DTRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEE-MHHEDFSMNGVHLKLDILDTS 118
D KVV++G VGKS+++ RF N F+ + K TI ++G +K I DT+
Sbjct: 2 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 61
Query: 119 G 119
G
Sbjct: 62 G 62
Score = 53.0 bits (126), Expect = 9e-09
Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 33/143 (23%)
Query: 169 LAMTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVV 228
+ T + + + A +LVY I ++E + + + A + + I++V
Sbjct: 57 IWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD-HADSNIVIMLV 115
Query: 229 GNKSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGF 288
GNKSDL F F
Sbjct: 116 GNKSDLRHLRAVPTDEARAFAEK--------------------------------NNLSF 143
Query: 289 VEASAKDNTNITQVFKELLVQAK 311
+E SA D+TN+ + FK +L +
Sbjct: 144 IETSALDSTNVEEAFKNILTEIY 166
Score = 32.5 bits (73), Expect = 0.071
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 351 WENGFVEASAKDNTNITQVFKELLVQAK 378
F+E SA D+TN+ + FK +L +
Sbjct: 139 NNLSFIETSALDSTNVEEAFKNILTEIY 166
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 53.8 bits (128), Expect = 4e-09
Identities = 20/66 (30%), Positives = 42/66 (63%)
Query: 63 HKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQS 122
HKV+++G VGKS++ +F+Y+ F Y+ T + + + ++G +++DILDT+G++
Sbjct: 5 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQED 64
Query: 123 GKGLKC 128
++
Sbjct: 65 YAAIRD 70
Score = 51.1 bits (121), Expect = 3e-08
Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 32/143 (22%)
Query: 171 MTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGN 230
T ++ A+R S + F+ V++I + SF R+ I K VP ++VGN
Sbjct: 58 DTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGN 117
Query: 231 KSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVE 290
KSDL D+ + W +VE
Sbjct: 118 KSDLEDKRQVSVEEAKNRAD--------------------------------QWNVNYVE 145
Query: 291 ASAKDNTNITQVFKELLVQAKVK 313
SAK N+ +VF +L+ + + +
Sbjct: 146 TSAKTRANVDKVFFDLMREIRAR 168
Score = 34.9 bits (79), Expect = 0.012
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQAKVK 380
W +VE SAK N+ +VF +L+ + + +
Sbjct: 138 QWNVNYVETSAKTRANVDKVFFDLMREIRAR 168
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 53.9 bits (128), Expect = 4e-09
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 62 RHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSG 119
HK+VV+GG VGKS++ +F+ + F Y TIE+ + + S++G+ +LDILDT+G
Sbjct: 6 THKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAG 63
Score = 43.1 bits (100), Expect = 2e-05
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 32/141 (22%)
Query: 171 MTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGN 230
T EF AMR + + F+LV+AI+D SF E+ + I K P+V+VGN
Sbjct: 60 DTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGN 119
Query: 231 KSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVE 290
K+DL + + S + E
Sbjct: 120 KADL--------------------------------ESQRQVPRSEASAFGASHHVAYFE 147
Query: 291 ASAKDNTNITQVFKELLVQAK 311
ASAK N+ + F++L+ +
Sbjct: 148 ASAKLRLNVDEAFEQLVRAVR 168
Score = 34.3 bits (77), Expect = 0.020
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQAK 378
+ EASAK N+ + F++L+ +
Sbjct: 140 SHHVAYFEASAKLRLNVDEAFEQLVRAVR 168
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 53.5 bits (127), Expect = 5e-09
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 61 TRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSG 119
T +K+VV+G VGKS++ + + N F +Y TIE+ + + ++G LDILDT+G
Sbjct: 2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 60
Score = 46.9 bits (110), Expect = 1e-06
Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 37/143 (25%)
Query: 171 MTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGN 230
T E+ AMR + + + F+ V+AI++ SFE+I R+ I K S VP+V+VGN
Sbjct: 57 DTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGN 116
Query: 231 KSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENG--F 288
K D + + G +
Sbjct: 117 KCD-----------------------------------LAARTVESRQAQDLARSYGIPY 141
Query: 289 VEASAKDNTNITQVFKELLVQAK 311
+E SAK + F L+ + +
Sbjct: 142 IETSAKTRQGVEDAFYTLVREIR 164
Score = 33.0 bits (74), Expect = 0.048
Identities = 7/42 (16%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 339 PYDTTESVVQVDWENG--FVEASAKDNTNITQVFKELLVQAK 378
+ + G ++E SAK + F L+ + +
Sbjct: 123 RTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIR 164
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 53.4 bits (127), Expect = 5e-09
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSG 119
KVVV+G VGKS++ +F+ TF KY TIE+ + ++ ++ L+ILDT+G
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAG 60
Score = 48.8 bits (115), Expect = 2e-07
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 32/136 (23%)
Query: 172 TCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNK 231
T T +F +MR L I + FILVY++ + SF++I+ +RD I K VP+++VGNK
Sbjct: 58 TAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNK 117
Query: 232 SDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEA 291
DL E G +W F+E
Sbjct: 118 VDLESEREVSSSEGRALAE--------------------------------EWGCPFMET 145
Query: 292 SAKDNTNITQVFKELL 307
SAK T + ++F E++
Sbjct: 146 SAKSKTMVDELFAEIV 161
Score = 33.7 bits (76), Expect = 0.027
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 350 DWENGFVEASAKDNTNITQVFKELL 374
+W F+E SAK T + ++F E++
Sbjct: 137 EWGCPFMETSAKSKTMVDELFAEIV 161
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 53.5 bits (127), Expect = 7e-09
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTS 118
K VV+G VGK+ ++ + N F +Y T+ + + + ++G + L + DT+
Sbjct: 7 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTA 61
Score = 45.8 bits (107), Expect = 3e-06
Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 20/138 (14%)
Query: 169 LAMTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVV 228
L T ++ +R LS D ++ +++ P SFE +R PI++V
Sbjct: 57 LWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPN-TPIILV 115
Query: 229 GNKSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGF 288
G K DL D+ ++ T ++ A +I +
Sbjct: 116 GTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVK-------------------Y 156
Query: 289 VEASAKDNTNITQVFKEL 306
+E SA + VF E
Sbjct: 157 LECSALTQRGLKTVFDEA 174
Score = 36.5 bits (83), Expect = 0.004
Identities = 10/54 (18%), Positives = 19/54 (35%)
Query: 320 LRRRRRQSLPPVQHSPNPVPYDTTESVVQVDWENGFVEASAKDNTNITQVFKEL 373
LR + + P+ Y ++ + ++E SA + VF E
Sbjct: 121 LRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEA 174
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 53.5 bits (127), Expect = 7e-09
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 62 RHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVH 109
+ K+VV+G + GK++++H F + F Y T+ E + F ++
Sbjct: 2 KCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQR 49
Score = 42.3 bits (98), Expect = 4e-05
Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 21/131 (16%)
Query: 181 MRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQ 240
+R LS +DA ++ + I P + + + + +++VG KSDL +
Sbjct: 66 VRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEI-QEFCPNTKMLLVGCKSDLRTDVST 124
Query: 241 VDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTN-I 299
+ QT +S YD ++ + ++E SA + N +
Sbjct: 125 LVELSNHRQTPVS-------------------YDQGANMAKQIGAATYIECSALQSENSV 165
Query: 300 TQVFKELLVQA 310
+F +
Sbjct: 166 RDIFHVATLAC 176
Score = 29.6 bits (65), Expect = 0.67
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 320 LRRRRRQSLPPVQHSPNPVPYDTTESVVQVDWENGFVEASAKDNTN-ITQVFKELLVQA 377
LR + H PV YD ++ + ++E SA + N + +F +
Sbjct: 118 LRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLAC 176
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 53.1 bits (126), Expect = 7e-09
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSG 119
K+VV+G VGKS++ +F+ F KY TIE+ + + ++ L+ILDT+G
Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAG 60
Score = 45.0 bits (105), Expect = 4e-06
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 31/136 (22%)
Query: 172 TCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNK 231
T T +F AMR L + + F LVY+I ++F +++ +R+ I K + VP+++VGNK
Sbjct: 58 TAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNK 117
Query: 232 SDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEA 291
D + + A Q F+E+
Sbjct: 118 CD------------LEDERVVGKEQGQNLARQWCNCA-------------------FLES 146
Query: 292 SAKDNTNITQVFKELL 307
SAK N+ ++F +L+
Sbjct: 147 SAKSKINVNEIFYDLV 162
Score = 33.8 bits (76), Expect = 0.027
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 354 GFVEASAKDNTNITQVFKELL 374
F+E+SAK N+ ++F +L+
Sbjct: 142 AFLESSAKSKINVNEIFYDLV 162
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 52.2 bits (124), Expect = 2e-08
Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 47/162 (29%)
Query: 169 LAMTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVV 228
+ T F ++ A +LVY I +F + + + +S+ + I+++
Sbjct: 56 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ-HSSSNMVIMLI 114
Query: 229 GNKSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENG- 287
GNKSD + E E+G
Sbjct: 115 GNKSD----------------------------------LESRRDVKREEGEAFAREHGL 140
Query: 288 -FVEASAKDNTNITQVFKELLVQAKVKYNLSPALRRRRRQSL 328
F+E SAK N+ + F + + R+ +Q L
Sbjct: 141 IFMETSAKTACNVEEAFINTAKE----------IYRKIQQGL 172
Score = 50.3 bits (119), Expect = 7e-08
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHH-EDFSMNGVHLKLDILDTSGEQS 122
K +++G VGKS ++ +F F P + TI +++G +KL I DT+G++S
Sbjct: 5 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 64
Query: 123 GKGL 126
+ +
Sbjct: 65 FRSI 68
Score = 33.7 bits (76), Expect = 0.030
Identities = 23/182 (12%), Positives = 52/182 (28%), Gaps = 26/182 (14%)
Query: 225 IVVVGN----KSDLADENRQVDLTGGPF-QTYLSGLPDSVCAHQISGTPDQVPYDTTESV 279
+++G+ KS L + T F + + A ++ Q+ ++
Sbjct: 6 YIIIGDTGVGKSCLL--LQ---FTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTA 60
Query: 280 VQVDWENGFVEASAKDNTNITQVFKELLVQAKVKYNLSPALRRRRRQSLPPV----QHSP 335
Q + + + + R+ ++ + +
Sbjct: 61 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDL 120
Query: 336 NPVPYDTTESVVQVDWENG--FVEASAKDNTNITQVFKELLVQAKVKYNLSPALRRRRRQ 393
E E+G F+E SAK N+ + F + + R+ +Q
Sbjct: 121 ESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE----------IYRKIQQ 170
Query: 394 SL 395
L
Sbjct: 171 GL 172
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 51.8 bits (123), Expect = 2e-08
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHE-DFSMNGVHLKLDILDTSGEQS 122
K +++G VGKS ++H+F F TI ++G +KL I DT+G++
Sbjct: 6 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 65
Query: 123 GKGLKC 128
+ +
Sbjct: 66 FRAVTR 71
Score = 51.0 bits (121), Expect = 4e-08
Identities = 27/138 (19%), Positives = 42/138 (30%), Gaps = 37/138 (26%)
Query: 172 TCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNK 231
T F A+ A ++VY I +++ + + I+++GNK
Sbjct: 60 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN-LTNPNTVIILIGNK 118
Query: 232 SDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENG--FV 289
+D + T E Q ENG F+
Sbjct: 119 AD----------------------------------LEAQRDVTYEEAKQFAEENGLLFL 144
Query: 290 EASAKDNTNITQVFKELL 307
EASAK N+ F E
Sbjct: 145 EASAKTGENVEDAFLEAA 162
Score = 32.9 bits (74), Expect = 0.050
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 350 DWENGFVEASAKDNTNITQVFKELL 374
+ F+EASAK N+ F E
Sbjct: 138 ENGLLFLEASAKTGENVEDAFLEAA 162
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 52.0 bits (123), Expect = 2e-08
Identities = 48/246 (19%), Positives = 81/246 (32%), Gaps = 87/246 (35%)
Query: 62 RHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQ 121
++++VV+GG VGKS++ +F+ + F Y ED
Sbjct: 5 KYRLVVVGGGGVGKSALTIQFIQSYFVTDYD-----PTIEDSYTKQCV------------ 47
Query: 122 SGKGLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEFPAM 181
+ LD + T EF AM
Sbjct: 48 -----------IDDRAARLDILD---------------------------TAGQEEFGAM 69
Query: 182 RALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQV 241
R + + + F+LV+++ D SFEEI + I K P++++GNK+DL + +
Sbjct: 70 REQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQV- 128
Query: 242 DLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNITQ 301
+ + ++EASAK N+ Q
Sbjct: 129 -------------------------------TQEEGQQLARQLKVTYMEASAKIRMNVDQ 157
Query: 302 VFKELL 307
F EL+
Sbjct: 158 AFHELV 163
Score = 33.9 bits (76), Expect = 0.023
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 350 DWENGFVEASAKDNTNITQVFKELL 374
+ ++EASAK N+ Q F EL+
Sbjct: 139 QLKVTYMEASAKIRMNVDQAFHELV 163
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 51.5 bits (122), Expect = 3e-08
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSG 119
+V V G VGKSS++ RF+ TF Y T+E+ + + S + L I DT+G
Sbjct: 4 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTG 59
Score = 38.0 bits (87), Expect = 0.001
Identities = 46/161 (28%), Positives = 65/161 (40%), Gaps = 48/161 (29%)
Query: 171 MTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKAST-AVPIVVVG 229
T +++FPAM+ LSIS AFILVY+I S EE++ I + I E K ++PI++VG
Sbjct: 56 DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG 115
Query: 230 NKSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENG-- 287
NK D + +
Sbjct: 116 NKCD----------------------------------ESPSREVQSSEAEALARTWKCA 141
Query: 288 FVEASAKDNTNITQVFKELLVQAKVKYNLSPALRRRRRQSL 328
F+E SAK N N+ ++F+ELL K RR SL
Sbjct: 142 FMETSAKLNHNVKELFQELLNLEK-----------RRTVSL 171
Score = 36.9 bits (84), Expect = 0.002
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQAKVKYNLSPALRRRRRQSL 395
W+ F+E SAK N N+ ++F+ELL K RR SL
Sbjct: 137 TWKCAFMETSAKLNHNVKELFQELLNLEK-----------RRTVSL 171
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 51.1 bits (121), Expect = 4e-08
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYK-RTIEEMHHEDFSMNGVHLKLDILDTSGEQ 121
KVV++G VGK+S++ R+ N F+ K+ + ++ G + L I DT+G++
Sbjct: 5 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQE 63
Score = 38.8 bits (89), Expect = 5e-04
Identities = 19/139 (13%), Positives = 40/139 (28%), Gaps = 33/139 (23%)
Query: 169 LAMTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVV 228
+ T F A+ + ++ ILVY I D +SF++++ + + + +
Sbjct: 56 IWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCI-- 113
Query: 229 GNKSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGF 288
++I ++
Sbjct: 114 -------------------------------VGNKIDLEKERHVSIQEAESYAESVGAKH 142
Query: 289 VEASAKDNTNITQVFKELL 307
SAK N I ++F +L
Sbjct: 143 YHTSAKQNKGIEELFLDLC 161
Score = 33.0 bits (74), Expect = 0.043
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 350 DWENGFVEASAKDNTNITQVFKELL 374
SAK N I ++F +L
Sbjct: 137 SVGAKHYHTSAKQNKGIEELFLDLC 161
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 51.2 bits (121), Expect = 4e-08
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHED--FSMNGVHLKLDILDTSGEQ 121
KV+++G VGK+S++HR++ + +S +YK TI + + DT+G++
Sbjct: 4 KVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQE 63
Score = 33.9 bits (76), Expect = 0.027
Identities = 26/145 (17%), Positives = 47/145 (32%), Gaps = 33/145 (22%)
Query: 169 LAMTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFE---TKASTAVPI 225
+ T F ++ AD +LVY + + +SFE I+ RD + P
Sbjct: 56 VWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPF 115
Query: 226 VVVGNKSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWE 285
V++GNK + V + + + + +
Sbjct: 116 VILGNK------------------------------IDAEESKKIVSEKSAQELAKSLGD 145
Query: 286 NGFVEASAKDNTNITQVFKELLVQA 310
SAK+ N+ F+E+ A
Sbjct: 146 IPLFLTSAKNAINVDTAFEEIARSA 170
Score = 32.3 bits (72), Expect = 0.090
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 351 WENGFVEASAKDNTNITQVFKELLVQA 377
+ SAK+ N+ F+E+ A
Sbjct: 144 GDIPLFLTSAKNAINVDTAFEEIARSA 170
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 50.5 bits (119), Expect = 6e-08
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSG 119
K+ ++G VGKSS+ +F+ F Y TIE + ++NG L ++DT+G
Sbjct: 6 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAG 61
Score = 38.9 bits (89), Expect = 6e-04
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 283 DWENGFVEASAKDNTNITQVFKELLVQAK 311
W F+E+SAK+N VF+ ++++A+
Sbjct: 138 SWNAAFLESSAKENQTAVDVFRRIILEAE 166
Score = 38.9 bits (89), Expect = 6e-04
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQAK 378
W F+E+SAK+N VF+ ++++A+
Sbjct: 138 SWNAAFLESSAKENQTAVDVFRRIILEAE 166
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 49.3 bits (116), Expect = 1e-07
Identities = 34/246 (13%), Positives = 60/246 (24%), Gaps = 88/246 (35%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQSG 123
K++V+G VGK+ + +RF F + + T
Sbjct: 4 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEAT----------------------------- 34
Query: 124 KGLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEFPAMRA 183
G + K+ +M
Sbjct: 35 ----IGVDFRERAVDIDGERI--------------------KIQLWDTAGQERFRKSMVQ 70
Query: 184 LSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQVDL 243
+ A + VY + + SF + + + + +P ++VGNK DL +
Sbjct: 71 HYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTD 130
Query: 244 TGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAK---DNTNIT 300
F E SAK DN ++
Sbjct: 131 LAQKFAD--------------------------------THSMPLFETSAKNPNDNDHVE 158
Query: 301 QVFKEL 306
+F L
Sbjct: 159 AIFMTL 164
Score = 27.7 bits (60), Expect = 2.7
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Query: 350 DWENGFVEASAK---DNTNITQVFKEL 373
E SAK DN ++ +F L
Sbjct: 138 THSMPLFETSAKNPNDNDHVEAIFMTL 164
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 49.3 bits (116), Expect = 2e-07
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQ 121
K+VV+G VGKS++ +F F P Y TIE+ + + ++ LD+LDT+G++
Sbjct: 6 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQE 63
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 49.3 bits (116), Expect = 2e-07
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVH 109
K+V++G VGKSSI+ RF+ N F+ + TI H
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEH 50
Score = 37.3 bits (85), Expect = 0.002
Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 30/143 (20%)
Query: 171 MTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGN 230
T F ++ + +A A ++VY + P SF + R + E + + I +VGN
Sbjct: 58 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKD-IIIALVGN 116
Query: 231 KSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVE 290
K D+ E + + + + F E
Sbjct: 117 KIDMLQEGGERKVAREEGEKLAE-----------------------------EKGLLFFE 147
Query: 291 ASAKDNTNITQVFKELLVQAKVK 313
SAK N+ VF + + +K
Sbjct: 148 TSAKTGENVNDVFLGIGEKIPLK 170
Score = 34.3 bits (77), Expect = 0.021
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQAKVK 380
+ F E SAK N+ VF + + +K
Sbjct: 140 EKGLLFFETSAKTGENVNDVFLGIGEKIPLK 170
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 49.2 bits (116), Expect = 2e-07
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVH 109
K VV+G VGK+ ++ + + F +Y T+ + + ++ G
Sbjct: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQ 56
Score = 43.8 bits (102), Expect = 1e-05
Identities = 24/148 (16%), Positives = 57/148 (38%), Gaps = 25/148 (16%)
Query: 171 MTCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGN 230
T ++ +R LS D F++ +++ +P SF+ ++ + + + VP +++G
Sbjct: 63 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGT 121
Query: 231 KSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVE 290
+ DL D+ + + + + + + + + +VE
Sbjct: 122 QIDLRDDPKTLARLNDMKEKP-------------------ICVEQGQKLAKEIGACCYVE 162
Query: 291 ASAKDNTNITQVFKELLVQAKVKYNLSP 318
SA + VF E ++ L+P
Sbjct: 163 CSALTQKGLKTVFDEAIIAI-----LTP 185
Score = 36.5 bits (83), Expect = 0.004
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Query: 320 LRRRRRQSLPPVQHSPNPVPYDTTESVVQVDWENGFVEASAKDNTNITQVFKELLVQAKV 379
LR + P+ + + + + +VE SA + VF E ++
Sbjct: 125 LRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI-- 182
Query: 380 KYNLSP 385
L+P
Sbjct: 183 ---LTP 185
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 48.5 bits (114), Expect = 2e-07
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHE-DFSMNGVHLKLDILDTSGEQS 122
K+VV+G VGKSS+I R+ F+ YK+TI E +N ++L + DT+G++
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 123 GKGLKC 128
+
Sbjct: 64 FDAITK 69
Score = 33.5 bits (75), Expect = 0.031
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 283 DWENGFVEASAKDNTNITQVFKELLVQA 310
+ F S K++ N+++VFK L +
Sbjct: 135 RLKLRFYRTSVKEDLNVSEVFKYLAEKH 162
Score = 33.5 bits (75), Expect = 0.031
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQA 377
+ F S K++ N+++VFK L +
Sbjct: 135 RLKLRFYRTSVKEDLNVSEVFKYLAEKH 162
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 48.5 bits (114), Expect = 2e-07
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTI-EEMHHEDFSMNGVHLKLDILDTSGEQS 122
KV ++G VGKSSI+ RF+ ++F P TI + K I DT+G +
Sbjct: 6 KVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLER 65
Query: 123 GKGL 126
+ L
Sbjct: 66 FRAL 69
Score = 34.2 bits (77), Expect = 0.017
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 283 DWENGFVEASAKDNTNITQVFKEL 306
FVE SAK+ NI ++F E+
Sbjct: 138 SIHAIFVETSAKNAININELFIEI 161
Score = 34.2 bits (77), Expect = 0.017
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 350 DWENGFVEASAKDNTNITQVFKEL 373
FVE SAK+ NI ++F E+
Sbjct: 138 SIHAIFVETSAKNAININELFIEI 161
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 48.1 bits (113), Expect = 4e-07
Identities = 14/58 (24%), Positives = 23/58 (39%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQ 121
K+V++G VGKSS++ RF+ F + TI + + Q
Sbjct: 8 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 65
Score = 33.1 bits (74), Expect = 0.054
Identities = 20/149 (13%), Positives = 48/149 (32%), Gaps = 12/149 (8%)
Query: 167 TSLAMTCSTNEFPAMRALSISSADAFI--------LVYAIDDPNSFEEIRLIRDHIFETK 218
+SL + +F + +I +A + + I D E + +
Sbjct: 20 SSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRG- 78
Query: 219 ASTAVPIVVVGNKSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTES 278
A +VV + ++ R + + + ++ ++ +
Sbjct: 79 ---AQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 135
Query: 279 VVQVDWENGFVEASAKDNTNITQVFKELL 307
D F+E SAK + N+ ++F +
Sbjct: 136 SYADDNSLLFMETSAKTSMNVNEIFMAIA 164
Score = 32.7 bits (73), Expect = 0.056
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 350 DWENGFVEASAKDNTNITQVFKELL 374
D F+E SAK + N+ ++F +
Sbjct: 140 DNSLLFMETSAKTSMNVNEIFMAIA 164
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 47.7 bits (112), Expect = 6e-07
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHE 101
++ V+G + GKSS+IHRFL ++ K E+ E
Sbjct: 7 RLGVLGDARSGKSSLIHRFLTGSYQVLEKTESEQYKKE 44
Score = 37.3 bits (85), Expect = 0.002
Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 9/70 (12%)
Query: 259 VCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNITQVFKELLVQAKVKYNLSP 318
+ +P V ++ + E A N+ +VF+E+ +
Sbjct: 114 TQDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQK--------- 164
Query: 319 ALRRRRRQSL 328
+ R++Q L
Sbjct: 165 VVTLRKQQQL 174
Score = 36.9 bits (84), Expect = 0.002
Identities = 9/56 (16%), Positives = 20/56 (35%), Gaps = 9/56 (16%)
Query: 340 YDTTESVVQVDWENGFVEASAKDNTNITQVFKELLVQAKVKYNLSPALRRRRRQSL 395
++ + E A N+ +VF+E+ + + R++Q L
Sbjct: 128 DARARALCADMKRCSYYETCATYGLNVDRVFQEVAQK---------VVTLRKQQQL 174
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 47.1 bits (110), Expect = 8e-07
Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 60 DTRHKVVVMGGPKVGKSSIIHRFLYNTFS--PKYKRTIEEMHHEDFSMNGVHLKLDI 114
+T ++VV++G VGKS++ + F S + E+ + ++G + +
Sbjct: 1 NTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIIL 57
Score = 36.7 bits (83), Expect = 0.004
Identities = 7/33 (21%), Positives = 20/33 (60%)
Query: 283 DWENGFVEASAKDNTNITQVFKELLVQAKVKYN 315
++ F+E SA N+ ++F+ ++ Q +++ +
Sbjct: 140 VFDCKFIETSAAVQHNVKELFEGIVRQVRLRRD 172
Score = 36.7 bits (83), Expect = 0.004
Identities = 7/33 (21%), Positives = 20/33 (60%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQAKVKYN 382
++ F+E SA N+ ++F+ ++ Q +++ +
Sbjct: 140 VFDCKFIETSAAVQHNVKELFEGIVRQVRLRRD 172
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 46.6 bits (109), Expect = 1e-06
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVH 109
K+V++G GK++ + R L F KY T+ H
Sbjct: 5 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRG 50
Score = 32.3 bits (72), Expect = 0.082
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 283 DWENGFVEASAKDNTNITQVFKELL 307
+ + SAK N N + F L
Sbjct: 134 KKNLQYYDISAKSNYNFEKPFLWLA 158
Score = 32.3 bits (72), Expect = 0.082
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 350 DWENGFVEASAKDNTNITQVFKELL 374
+ + SAK N N + F L
Sbjct: 134 KKNLQYYDISAKSNYNFEKPFLWLA 158
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 45.8 bits (107), Expect = 2e-06
Identities = 9/65 (13%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQSG 123
+++++G GK++I+++ TI + ++ ++ + D G+
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIVT----TIPTIGFNVETVEYKNISFTVWDVGGQDKI 57
Query: 124 KGLKC 128
+ L
Sbjct: 58 RPLWR 62
Score = 31.9 bits (71), Expect = 0.12
Identities = 13/155 (8%), Positives = 38/155 (24%), Gaps = 7/155 (4%)
Query: 225 IVVVGN----KSDLADE--NRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTES 278
I++VG K+ + + ++ T + + + + Q
Sbjct: 3 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWR 62
Query: 279 VVQVDWENGFVEASAKDNTNITQVFKELLVQAKVKYNLSPALRRRRRQSLPPVQHSPNPV 338
+ + + D + + +EL+ L + P + +
Sbjct: 63 HYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEI 122
Query: 339 PYDTTESVVQVDWENGFVEASAKDNTNITQVFKEL 373
++ A + + L
Sbjct: 123 TDKLGLHSLR-HRNWYIQATCATSGDGLYEGLDWL 156
Score = 30.0 bits (66), Expect = 0.44
Identities = 15/116 (12%), Positives = 25/116 (21%), Gaps = 29/116 (25%)
Query: 191 AFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQVDLTGGPFQT 250
I V +D E R + ++V NK DL + ++T
Sbjct: 70 GLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 129
Query: 251 YLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNITQVFKEL 306
L +W A + + L
Sbjct: 130 SLRHR---------------------------NWY--IQATCATSGDGLYEGLDWL 156
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 45.8 bits (107), Expect = 2e-06
Identities = 6/43 (13%), Positives = 17/43 (39%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMN 106
++ ++G GK++ ++ F+ T+ + N
Sbjct: 4 ELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGN 46
Score = 34.7 bits (78), Expect = 0.015
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 283 DWENGFVEASAKDNTNITQVFKELLVQAK 311
D E S K+ NI + L+ +K
Sbjct: 136 DREICCYSISCKEKDNIDITLQWLIQHSK 164
Score = 34.7 bits (78), Expect = 0.015
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQAK 378
D E S K+ NI + L+ +K
Sbjct: 136 DREICCYSISCKEKDNIDITLQWLIQHSK 164
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 45.1 bits (105), Expect = 4e-06
Identities = 10/46 (21%), Positives = 17/46 (36%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVH 109
KV+++G P VGKS++ F P+ +
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEA 48
Score = 37.0 bits (84), Expect = 0.002
Identities = 7/33 (21%), Positives = 20/33 (60%)
Query: 283 DWENGFVEASAKDNTNITQVFKELLVQAKVKYN 315
++ F+E SA + N+ +F+ ++ Q +++ +
Sbjct: 134 VFDCKFIETSAALHHNVQALFEGVVRQIRLRRD 166
Score = 37.0 bits (84), Expect = 0.002
Identities = 7/33 (21%), Positives = 20/33 (60%)
Query: 350 DWENGFVEASAKDNTNITQVFKELLVQAKVKYN 382
++ F+E SA + N+ +F+ ++ Q +++ +
Sbjct: 134 VFDCKFIETSAALHHNVQALFEGVVRQIRLRRD 166
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 42.2 bits (98), Expect = 4e-05
Identities = 10/65 (15%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQSG 123
+++++G GK++I+++ TI + ++ ++K ++ D G+
Sbjct: 14 RILMLGLDAAGKTTILYKLKLGQSVT----TIPTVGFNVETVTYKNVKFNVWDVGGQDKI 69
Query: 124 KGLKC 128
+ L
Sbjct: 70 RPLWR 74
Score = 34.5 bits (78), Expect = 0.014
Identities = 17/121 (14%), Positives = 30/121 (24%), Gaps = 29/121 (23%)
Query: 191 AFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQVDLTGGPFQT 250
I V D + +E R I + I++ NK DL D + ++ T
Sbjct: 82 GLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLT 141
Query: 251 YLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNITQVFKELLVQA 310
+ +W + A + + L
Sbjct: 142 RIR---------------------------DRNWY--VQPSCATSGDGLYEGLTWLTSNY 172
Query: 311 K 311
K
Sbjct: 173 K 173
Score = 31.5 bits (70), Expect = 0.15
Identities = 3/24 (12%), Positives = 6/24 (25%)
Query: 355 FVEASAKDNTNITQVFKELLVQAK 378
+ A + + L K
Sbjct: 150 VQPSCATSGDGLYEGLTWLTSNYK 173
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 41.2 bits (95), Expect = 9e-05
Identities = 5/37 (13%), Positives = 15/37 (40%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHH 100
+++++G GK++I++R +
Sbjct: 7 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVET 43
Score = 29.7 bits (65), Expect = 0.55
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 288 FVEASAKDNTNITQVFKELLVQAKVK 313
+ SA T + + + L+ K +
Sbjct: 143 IFKTSATKGTGLDEAMEWLVETLKSR 168
Score = 29.7 bits (65), Expect = 0.55
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 355 FVEASAKDNTNITQVFKELLVQAKVK 380
+ SA T + + + L+ K +
Sbjct: 143 IFKTSATKGTGLDEAMEWLVETLKSR 168
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 40.7 bits (94), Expect = 1e-04
Identities = 18/127 (14%), Positives = 32/127 (25%), Gaps = 29/127 (22%)
Query: 181 MRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQ 240
+ D I V D FEE + E + + VP+++ NK DL
Sbjct: 76 YWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPA 135
Query: 241 VDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNIT 300
++ G ++ W+ SA +
Sbjct: 136 SEIAEG---------------------------LNLHTIRDRVWQ--IQSCSALTGEGVQ 166
Query: 301 QVFKELL 307
+
Sbjct: 167 DGMNWVC 173
Score = 37.2 bits (85), Expect = 0.002
Identities = 6/50 (12%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLD 113
+++++G GK++++ + S + + G L +
Sbjct: 18 RILLLGLDNAGKTTLLKQLASEDISHITPTQ--GFNIKSVQSQGFKLNVW 65
Score = 28.8 bits (63), Expect = 1.2
Identities = 2/20 (10%), Positives = 4/20 (20%)
Query: 355 FVEASAKDNTNITQVFKELL 374
SA + +
Sbjct: 154 IQSCSALTGEGVQDGMNWVC 173
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 40.4 bits (93), Expect = 1e-04
Identities = 9/49 (18%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFS---PKYKRTIEEMHHEDFSMNGVH 109
K++ +G GK++++H + + P + T EE+ +
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFD 50
Score = 27.3 bits (59), Expect = 4.1
Identities = 3/19 (15%), Positives = 5/19 (26%)
Query: 288 FVEASAKDNTNITQVFKEL 306
S + F+ L
Sbjct: 145 VFMCSVVMRNGYLEAFQWL 163
Score = 27.3 bits (59), Expect = 4.1
Identities = 3/19 (15%), Positives = 5/19 (26%)
Query: 355 FVEASAKDNTNITQVFKEL 373
S + F+ L
Sbjct: 145 VFMCSVVMRNGYLEAFQWL 163
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 40.9 bits (95), Expect = 2e-04
Identities = 9/52 (17%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 63 HKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDI 114
H+++++G + GKS+I+ + T + F ++ V+ +
Sbjct: 7 HRLLLLGAGESGKSTIVKQMRILHVVL----TS-GIFETKFQVDKVNFHMFD 53
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 39.6 bits (91), Expect = 3e-04
Identities = 10/57 (17%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 62 RHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTS 118
HKV+++G GK++I+++F N + + + + + D
Sbjct: 15 EHKVIIVGLDNAGKTTILYQFSMNEVVHTS----PTIGSNVEEIVINNTRFLMWDIG 67
Score = 33.4 bits (75), Expect = 0.043
Identities = 3/25 (12%), Positives = 9/25 (36%)
Query: 288 FVEASAKDNTNITQVFKELLVQAKV 312
A + Q + ++ + K+
Sbjct: 153 IQACCALTGEGLCQGLEWMMSRLKI 177
Score = 33.4 bits (75), Expect = 0.043
Identities = 3/25 (12%), Positives = 9/25 (36%)
Query: 355 FVEASAKDNTNITQVFKELLVQAKV 379
A + Q + ++ + K+
Sbjct: 153 IQACCALTGEGLCQGLEWMMSRLKI 177
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 38.8 bits (89), Expect = 7e-04
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKY 91
V+ +G GK+ + R L +
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYRDTQ 29
Score = 29.2 bits (64), Expect = 1.2
Identities = 5/46 (10%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 195 VYAIDDPNSFEEIRLIRDHIFETKASTA--VPIVVVGNKSDLADEN 238
V + +++ + + +++ NK D+A
Sbjct: 79 VDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAK 124
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 38.1 bits (87), Expect = 8e-04
Identities = 6/37 (16%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHH 100
+++++G GK++I+ +F T+
Sbjct: 4 RLLMLGLDNAGKTTILKKFNGEDVD-TISPTLGFNIK 39
Score = 28.9 bits (63), Expect = 1.0
Identities = 4/20 (20%), Positives = 6/20 (30%)
Query: 288 FVEASAKDNTNITQVFKELL 307
SA ++ LL
Sbjct: 140 IQGCSAVTGEDLLPGIDWLL 159
Score = 28.9 bits (63), Expect = 1.0
Identities = 4/20 (20%), Positives = 6/20 (30%)
Query: 355 FVEASAKDNTNITQVFKELL 374
SA ++ LL
Sbjct: 140 IQGCSAVTGEDLLPGIDWLL 159
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 38.0 bits (87), Expect = 0.001
Identities = 10/61 (16%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 58 GHDTRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDT 117
G + +++++G GK++I++R + +++ +LKL++ D
Sbjct: 13 GSNKELRILILGLDGAGKTTILYRLQIGEVVTTK----PTIGFNVETLSYKNLKLNVWDL 68
Query: 118 S 118
Sbjct: 69 G 69
Score = 30.7 bits (68), Expect = 0.35
Identities = 17/140 (12%), Positives = 30/140 (21%), Gaps = 29/140 (20%)
Query: 172 TCSTNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNK 231
+ A I V D + + + + ++V NK
Sbjct: 68 LGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANK 127
Query: 232 SDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEA 291
D +++ L W V +
Sbjct: 128 QDQPGALSASEVSKELNLVELKDR---------------------------SWS--IVAS 158
Query: 292 SAKDNTNITQVFKELLVQAK 311
SA IT+ L+ K
Sbjct: 159 SAIKGEGITEGLDWLIDVIK 178
Score = 30.3 bits (67), Expect = 0.47
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 355 FVEASAKDNTNITQVFKELLVQAK 378
V +SA IT+ L+ K
Sbjct: 155 IVASSAIKGEGITEGLDWLIDVIK 178
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 38.0 bits (87), Expect = 0.001
Identities = 6/42 (14%), Positives = 16/42 (38%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSM 105
K++++G + GKS+I+ + + +
Sbjct: 4 KLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTFKDLHFK 45
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 38.1 bits (87), Expect = 0.002
Identities = 10/87 (11%), Positives = 24/87 (27%)
Query: 65 VVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQSGK 124
+++ G GK+S++ ++ P + + +
Sbjct: 6 IIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADYDGSGVTLVDFPGHVKLRYKLSD 65
Query: 125 GLKCGAVLWGPKKWGLDKVCLRRALNQ 151
LK A + +D + L
Sbjct: 66 YLKTRAKFVKGLIFMVDSTVDPKKLTT 92
Score = 27.7 bits (60), Expect = 3.7
Identities = 18/128 (14%), Positives = 31/128 (24%), Gaps = 27/128 (21%)
Query: 192 FILVYAIDDPNSFEEIRLIRD---HIFETKASTAVPIVVVGNKSDLADENRQVDLTGGPF 248
+V + DP I E+ + I++ NKS+L
Sbjct: 78 IFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSELFTAR---------- 127
Query: 249 QTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNITQVFKELLV 308
P S + +V +S+ VE + L
Sbjct: 128 -------PPSKIKDALESEIQKVIERRKKSLN-------EVERKINEEDYAENTLDVLQS 173
Query: 309 QAKVKYNL 316
K+
Sbjct: 174 TDGFKFAN 181
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 37.2 bits (85), Expect = 0.003
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTI 95
K++++G + GKS+ I + S T
Sbjct: 4 KLLLLGTGESGKSTFIKQMRIIHGS--GVPTT 33
Score = 27.2 bits (59), Expect = 5.2
Identities = 21/117 (17%), Positives = 36/117 (30%), Gaps = 6/117 (5%)
Query: 190 DAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQVDLTGGPFQ 249
+ ++ D+ N EE + + I +++ NK DL +E F
Sbjct: 80 EYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFP 139
Query: 250 TYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNITQVFKEL 306
Y D+ A + + + D A D NI VF +
Sbjct: 140 EYDGPQRDAQAAREF------ILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAV 190
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 37.7 bits (86), Expect = 0.003
Identities = 31/251 (12%), Positives = 61/251 (24%), Gaps = 18/251 (7%)
Query: 65 VVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQSGK 124
VV +G GK+++ F + + D + + + I +
Sbjct: 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV----NLDTGVKELPYEPSIDVREFVTVEE 58
Query: 125 GLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEFPAMRA- 183
++ + + R K L T E
Sbjct: 59 IMRE----GYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEF 114
Query: 184 -LSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKAS---TAVPIVVVGNKSDLADENR 239
+ + + LV I DP ++ F + NK DL E
Sbjct: 115 GVRLMENLPYPLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSEEE 174
Query: 240 QVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNI 299
+ + + L + + Y + +V + SAK
Sbjct: 175 KERHR--KYFEDIDYLTARL--KLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGF 230
Query: 300 TQVFKELLVQA 310
+ L +
Sbjct: 231 EDLE-TLAYEH 240
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 36.6 bits (83), Expect = 0.003
Identities = 6/37 (16%), Positives = 13/37 (35%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHH 100
K+V +G GK++++H +
Sbjct: 15 KLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 51
Score = 31.2 bits (69), Expect = 0.21
Identities = 16/117 (13%), Positives = 35/117 (29%), Gaps = 17/117 (14%)
Query: 190 DAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQVDLTGGPFQ 249
+ + + D E + D + + VPI+++GNK D + + L
Sbjct: 82 NGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 141
Query: 250 TYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNITQVFKEL 306
+ SV +++ P + S + F+ +
Sbjct: 142 YGQTTGKGSVSLKELNARPLE-----------------VFMCSVLKRQGYGEGFRWM 181
Score = 28.1 bits (61), Expect = 2.4
Identities = 2/19 (10%), Positives = 5/19 (26%)
Query: 355 FVEASAKDNTNITQVFKEL 373
S + F+ +
Sbjct: 163 VFMCSVLKRQGYGEGFRWM 181
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 34.9 bits (79), Expect = 0.014
Identities = 6/32 (18%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTI 95
K++++G + GKS+ + + T
Sbjct: 4 KILLLGAGESGKSTFLKQM---RIIHGQDPTK 32
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 33.5 bits (75), Expect = 0.037
Identities = 16/80 (20%), Positives = 30/80 (37%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQSG 123
KV ++G P VGKS++ + L + D + K +DT+G +
Sbjct: 10 KVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRRK 69
Query: 124 KGLKCGAVLWGPKKWGLDKV 143
++ V +D +
Sbjct: 70 SRVEPRTVEKYSNYRVVDSI 89
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 33.4 bits (75), Expect = 0.038
Identities = 23/181 (12%), Positives = 52/181 (28%), Gaps = 7/181 (3%)
Query: 63 HKVVVM-GGPKVGKSSIIHRFLYNTFSPKYKRTIE----EMHHEDFSMNGVHLKLDILDT 117
+KVVV+ G P VG ++ + + + E + D +
Sbjct: 1 NKVVVVTGVPGVGSTTSSQL-AMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRK 59
Query: 118 SGEQSGKGLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNE 177
++ K ++ A + V + L L
Sbjct: 60 MDPETQKRIQKMAGRKIAEMAKESPVAVDTHSTVSTPKGYLPGLPSWVLNELNPDLIIVV 119
Query: 178 FPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFETKAS-TAVPIVVVGNKSDLAD 236
+ + V +D ++ E+ + + + T + +V N++ L D
Sbjct: 120 ETTGDEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSYGVLTGATVKIVQNRNGLLD 179
Query: 237 E 237
+
Sbjct: 180 Q 180
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 33.2 bits (74), Expect = 0.046
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 64 KVVVMGGPKVGKSSIIHRFL 83
KVV+ G P GKSS+++
Sbjct: 3 KVVIAGRPNAGKSSLLNALA 22
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 31.2 bits (69), Expect = 0.19
Identities = 10/48 (20%), Positives = 20/48 (41%)
Query: 65 VVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKL 112
V ++G P VGKS++++ L +P R + ++
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQI 55
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 31.3 bits (69), Expect = 0.21
Identities = 15/141 (10%), Positives = 37/141 (26%)
Query: 60 DTRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSG 119
DT +V G GKSS ++ + +T + +L L G
Sbjct: 14 DTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYG 73
Query: 120 EQSGKGLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEFP 179
++ + L+ + + + + +
Sbjct: 74 YAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVL 133
Query: 180 AMRALSISSADAFILVYAIDD 200
+A ++S + + +
Sbjct: 134 LTKADKLASGARKAQLNMVRE 154
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 31.2 bits (70), Expect = 0.22
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 177 EFPAMRALSISSADAFILVYAIDD---PNSFEEIRLIRDHIFETKASTAVPIVVVGNKSD 233
++ + D ILV A +D P + R+H+ + +VV NK+D
Sbjct: 78 DYVKNMITGTAPLDGCILVVAANDGPMPQT-------REHLLLARQIGVEHVVVYVNKAD 130
Query: 234 LADENRQVDL 243
++ V+L
Sbjct: 131 AVQDSEMVEL 140
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 31.7 bits (71), Expect = 0.24
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 43 NLVSASSENESGSSEGHDTRHKVVVMGGPKVGKSSIIHRFL 83
N+ +S E + V V G GKSS I+
Sbjct: 37 NIQLTNSAISDALKEIDSSVLNVAVTGETGSGKSSFINTLR 77
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 30.7 bits (68), Expect = 0.25
Identities = 9/20 (45%), Positives = 17/20 (85%)
Query: 64 KVVVMGGPKVGKSSIIHRFL 83
++V++G P VGKS++++R L
Sbjct: 2 RMVIVGKPNVGKSTLLNRLL 21
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 30.1 bits (66), Expect = 0.48
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 65 VVVMGGPKVGKSSIIHRFL 83
V+++G P VGKS++ ++ +
Sbjct: 3 VLIVGRPNVGKSTLFNKLV 21
>d1hfia_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo
sapiens) [TaxId: 9606]}
Length = 62
Score = 27.6 bits (61), Expect = 0.71
Identities = 7/42 (16%), Positives = 13/42 (30%)
Query: 516 SCKHPQEPEHGNLVINFWVGFIYLKQDMTHILTEENYKANGP 557
C P + EHG + + Y E ++ +
Sbjct: 4 PCSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEE 45
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 29.5 bits (65), Expect = 0.91
Identities = 28/242 (11%), Positives = 59/242 (24%), Gaps = 55/242 (22%)
Query: 65 VVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQSGK 124
+ V+G GK++++ K + E + + + ++
Sbjct: 11 IGVVGHVDHGKTTLVQAITGIW---TSKHSEELKRGMTIKLGYAETNIGVCES------- 60
Query: 125 GLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEFPAMRAL 184
K D + S A
Sbjct: 61 ---------------CKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLS 105
Query: 185 SISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADENRQVDLT 244
+ D ILV A ++P + R + +++V NK D+ + +
Sbjct: 106 GAALMDGAILVVAANEPFPQPQTREHFVALGIIG---VKNLIIVQNKVDVVSKEEALSQY 162
Query: 245 GGPFQTYLSGLPDSVCAHQISGTPDQVPYDTTESVVQVDWENGFVEASAKDNTNITQVFK 304
+ + G + VP + SA NI + +
Sbjct: 163 RQ-IKQFTKGTW-----------AENVP---------------IIPVSALHKINIDSLIE 195
Query: 305 EL 306
+
Sbjct: 196 GI 197
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 239
Score = 29.2 bits (65), Expect = 1.3
Identities = 40/209 (19%), Positives = 61/209 (29%), Gaps = 32/209 (15%)
Query: 65 VVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQSGK 124
VVV+G GKS+ +Y KRTIE+ E + K
Sbjct: 9 VVVIGHVDSGKSTTTGHLIYKCGG-IDKRTIEKFEKEAAELGKGSFKYA----------- 56
Query: 125 GLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEFPAMRAL 184
W LDK+ R + P ++ +F
Sbjct: 57 -------------WVLDKLKAERERGITIDIALWKFETPKYQVTVIDAPGHRDFIKNMIT 103
Query: 185 SISSADAFILVYAIDD---PNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADEN--- 238
S AD IL+ A + R+H ++V NK D +
Sbjct: 104 GTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSVKWDESR 163
Query: 239 -RQVDLTGGPFQTYLSGLPDSVCAHQISG 266
+++ F + P +V ISG
Sbjct: 164 FQEIVKETSNFIKKVGYNPKTVPFVPISG 192
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 28.8 bits (63), Expect = 1.5
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Query: 65 VVVMGGPKVGKSSIIHRFLYNTFSPKYKRTI---EEMHHEDFSMNGVHLKLDI 114
+V G GK+ +FLYN + + E +D N D+
Sbjct: 29 TLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDL 81
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 28.5 bits (62), Expect = 1.7
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 65 VVVMGGPKVGKSSIIHRFL 83
++ G VGKS++I+R
Sbjct: 3 IIFAGRSNVGKSTLIYRLT 21
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 28.5 bits (63), Expect = 1.9
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 186 ISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADEN 238
+++ D ILV + P + D + V+V NK DL DE+
Sbjct: 8 VANVDQVILVVTVKMPE-TSTYII--DKFLVLAEKNELETVMVINKMDLYDED 57
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 28.1 bits (61), Expect = 2.1
Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Query: 65 VVVMGGPKVGKSSIIHRFL-YNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQSG 123
+ ++G P VGKS+++++ L K G + + +
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 67
Query: 124 KGLKCGAVLWGPKKWGLDKVCL 145
K + D +
Sbjct: 68 KRAINRLMNKAASSSIGDVELV 89
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 28.6 bits (63), Expect = 2.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 64 KVVVMGGPKVGKSSIIHRFL 83
++VMG VGKSS ++ +
Sbjct: 34 TILVMGKGGVGKSSTVNSII 53
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 28.2 bits (61), Expect = 2.2
Identities = 9/48 (18%), Positives = 18/48 (37%)
Query: 64 KVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLK 111
++ + G VGKSS I+ + + + +F + L
Sbjct: 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELH 72
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 188
Score = 27.6 bits (61), Expect = 2.8
Identities = 18/57 (31%), Positives = 21/57 (36%)
Query: 144 CLRRALNQRPMAYKTDVQLPSKLTSLAMTCSTNEFPAMRALSISSADAFILVYAIDD 200
CLR R D LP+ S N FP L+ S+A LV AI
Sbjct: 76 CLRDLRQLRKEMESKDASLPTLSQWKLHIVSENNFPTAAGLASSAAGFAALVSAIAK 132
>d1f00i2 b.1.14.1 (I:753-841) Intimin {Escherichia coli [TaxId:
562]}
Length = 89
Score = 26.3 bits (58), Expect = 3.3
Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 17/85 (20%)
Query: 217 TKASTAVPIVVVGNKSDLADENRQVDLTGGPFQTYLSGLPDSVCAHQISGTPDQVPYDTT 276
T + IV G K L V L G + SG + + +
Sbjct: 3 TIDDGNIEIVGTGVKGKLP----TVWLQYGQVNL------------KASGGNGKYTWRSA 46
Query: 277 -ESVVQVDWENGFVEASAKDNTNIT 300
++ VD +G V K T I+
Sbjct: 47 NPAIASVDASSGQVTLKEKGTTTIS 71
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase
domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 27.7 bits (60), Expect = 3.6
Identities = 9/46 (19%), Positives = 17/46 (36%)
Query: 65 VVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHL 110
++V G +GKS+ + + + K+ M E L
Sbjct: 38 IMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEESVEETAEDL 83
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 27.3 bits (59), Expect = 4.4
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 64 KVVVMGGPKVGKSSIIHR---FLYNTFSPKYKRTIEEMHHED 102
V ++GG GKS ++++ T + +Y R
Sbjct: 9 TVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGG 50
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 27.1 bits (59), Expect = 5.2
Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Query: 65 VVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDILDTSGEQSGK 124
+V +G GKS++ L+ T KRT+E++ E L S + +
Sbjct: 27 IVFIGHVDAGKSTLGGNILFLTGM-VDKRTMEKIEREAKEAGKESWYLSWALDSTSEERE 85
Query: 125 GLKCGAVLWGPKKWGLDKVC 144
K V + +
Sbjct: 86 KGKTVEVGRAYFETEHRRFS 105
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 27.1 bits (58), Expect = 5.5
Identities = 7/72 (9%), Positives = 18/72 (25%), Gaps = 6/72 (8%)
Query: 38 FNRILNLVSASSENESGSSEGHDTRHKVVVMGGPKVGKSSIIHRFLYNTFSPKYKRTIEE 97
++ L+ N ++G P GK+ + + R +
Sbjct: 25 LQQLDILLGNWLRNPGHHYPR------ATLLGRPGTGKTVTLRKLWELYKDKTTARFVYI 78
Query: 98 MHHEDFSMNGVH 109
+ +
Sbjct: 79 NGFIYRNFTAII 90
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 26.8 bits (58), Expect = 6.2
Identities = 26/162 (16%), Positives = 46/162 (28%), Gaps = 14/162 (8%)
Query: 64 KVVVMGGPKVGKSSIIHRF-----LYNTFSPKYKRTIEEMHHEDFSMNGVHLKLDIL--- 115
+++ G P VGK+++ L R + D + L D +
Sbjct: 6 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDE 65
Query: 116 -DTSGEQSGKGLKCGAVLWGPKKWGLDKVCLRRALNQRPMAYKTDVQLPSKLTSLAMTCS 174
D + G + + P++W LR N +T KLT
Sbjct: 66 LDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQCEI 125
Query: 175 TNEFPAMRALSISSADAFILVYAIDDPNSFEEIRLIRDHIFE 216
+ + + N EE+ D I +
Sbjct: 126 FQVLYEEA-TASYKEEIVHQL----PSNKPEELENNVDQILK 162
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 26.6 bits (58), Expect = 8.1
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 185 SISSADAFILVYAIDDPNSFEEIRLIRDHIFETKASTAVPIVVVGNKSDLADE 237
I + D +LV++ P+ F L D + + ++ K DL ++
Sbjct: 7 PICNVDQAVLVFSAVQPS-FSTALL--DRFLVLVEANDIQPIICITKMDLIED 56
Score = 26.6 bits (58), Expect = 8.7
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 62 RHKVVVMGGPKVGKSSIIHRFL 83
V G VGKSS+++
Sbjct: 97 DKTTVFAGQSGVGKSSLLNAIS 118
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.133 0.397
Gapped
Lambda K H
0.267 0.0484 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,199,249
Number of extensions: 103502
Number of successful extensions: 563
Number of sequences better than 10.0: 1
Number of HSP's gapped: 549
Number of HSP's successfully gapped: 199
Length of query: 592
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 502
Effective length of database: 1,171,896
Effective search space: 588291792
Effective search space used: 588291792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (25.9 bits)