BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15240
(155 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1XX4|A Chain A, Crystal Structure Of Rat Mitochondrial 3,2-Enoyl-Coa
Length = 261
Score = 153 bits (386), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 106/156 (67%), Gaps = 2/156 (1%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMV-GPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELA 59
+ G +P GC A++C+YRIM KYTIGLNE+ +GI+APFW D V+T+G R E A
Sbjct: 105 INGASPAGGCLMALTCDYRIMADNSKYTIGLNESLLGIVAPFWLKDNYVNTIGHRAAERA 164
Query: 60 LTSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTIS 119
L G +F AEALKVGL+D EV E++ ++A + +A++ TIP +R+LTK M+R+ T
Sbjct: 165 LQLGTLFPPAEALKVGLVD-EVVPEDQVHSKARSVMAKWFTIPDHSRQLTKSMMRKATAD 223
Query: 120 NLMENKEKDLKNVVDLITSPQVQKGLGLYLQSLKKK 155
NL++ +E D++N I+ +QK L +YL+ LK+K
Sbjct: 224 NLIKQREADIQNFTSFISRDSIQKSLHVYLEKLKQK 259
>pdb|1SG4|A Chain A, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
pdb|1SG4|B Chain B, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
pdb|1SG4|C Chain C, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
Length = 260
Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMV-GPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELA 59
+ G P GC A++C+YRI+ P+Y IGLNET++GIIAPFW DT+ +T+G R E A
Sbjct: 104 INGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERA 163
Query: 60 LTSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTIS 119
L G +F AEAL+VG++D +V EE+ + A + +AQ+ IP AR+LTK M+R+ T S
Sbjct: 164 LQLGLLFPPAEALQVGIVD-QVVPEEQVQSTALSAIAQWMAIPDHARQLTKAMMRKATAS 222
Query: 120 NLMENKEKDLKNVVDLITSPQVQKGLGLYLQSLKKK 155
L+ ++ D++N V I+ +QK L +YL+ LK++
Sbjct: 223 RLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEE 258
>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
Length = 263
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G+A G G ++C+ RI + + N KMGI + +G QT L
Sbjct: 108 INGYAYGGGFNMMLACDRRIALRRAKFLE-NFHKMGISPDLGASYFLPRIIGYEQTMNLL 166
Query: 61 TSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYAT--IPGAARKLTKLMLREKTI 118
GK+FTS EAL++GLI E +++E R + +L + +P A TK +L+ K
Sbjct: 167 LEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPAIAA--TKKLLKGKAA 224
Query: 119 SNLMENKEKDLKNVVDLITSPQVQKGL 145
L + E++ + +V L +++K L
Sbjct: 225 EELKQQLEQETEELVALFKQTEIKKRL 251
>pdb|3OT6|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE
FAMILY PROTEIN From Psudomonas Syringae
Length = 232
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
GHA G +S +YRI V ++IGLNE ++G ++ L ++ +
Sbjct: 103 GHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGXTXHHAGIELARDRLRKSAFNRSVIN 162
Query: 63 GKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTISNLM 122
+ F A G +D +V S EE A AQ I A K TKL +R+ + L
Sbjct: 163 AEXFDPEGAXAAGFLD-KVVSVEELQGAALAVAAQLKKINXNAHKKTKLKVRKGLLDTLD 221
Query: 123 ENKEKD 128
E+D
Sbjct: 222 AAIEQD 227
>pdb|2PPY|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
Length = 265
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
++GH G G + A++C+ R IGL E +G++A + +G +
Sbjct: 108 LEGHTVGGGLEXALACDLRFXGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDXN 167
Query: 61 TSGKMFTSAEALKVGLIDEEVTSEEEAITRAETF---LAQYATIPGAARKLTKLMLREKT 117
+G+ T EAL++GL++ V + E R + LA AT + KL +E
Sbjct: 168 ITGETITPQEALEIGLVN-RVFPQAETRERTREYARKLANSATYAVSNIKLAIXNGKEXP 226
Query: 118 ISNLMENKEKDLKNVVDLITSPQVQKGLGLYLQ 150
+ N+ E +L+N+ L S ++GL +L+
Sbjct: 227 L-NVAIRYEGELQNL--LFRSEDAKEGLSAFLE 256
>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
Length = 261
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLG-PRQTELA 59
+ G A G G +FA SC R +GL E +G+I F + +G + E
Sbjct: 105 IHGAALGGGLEFAXSCHXRFAT-ESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEXX 163
Query: 60 LTSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATI--------PGAARKLTKL 111
LTS + T AEALK GL++ + ETFL + P AR + +L
Sbjct: 164 LTSTPI-TGAEALKWGLVN--------GVFAEETFLDDTLKVAKQIAGKSPATARAVLEL 214
Query: 112 MLREKTISNLMENKEKDLKNVVDLITSPQVQKGLGLYLQSLK 153
+ K+ S+ E +++ + ++ TS ++G+ +L+ K
Sbjct: 215 LQTTKS-SHYYEGVQREAQIFGEVFTSEDGREGVAAFLEKRK 255
>pdb|3R6H|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase (Echa3) From
Mycobacterium Marinum
Length = 233
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
GHA G S ++R+ Y + NE +G+ P+ ++ + L P + A
Sbjct: 104 GHAIAMGAFLLCSGDHRV-AAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQQAAGL 162
Query: 63 GKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTI 118
K F AL G IDE ++ E ++RAE ++A + A TKL R + +
Sbjct: 163 AKTFFGETALAAGFIDE-ISLPEVVLSRAEEAAREFAGLNQQAHNATKLRARAEAL 217
>pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
Length = 277
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G+A GAG A++ ++R+ G G E G+I + + +G + + +
Sbjct: 122 VTGYALGAGLTLALAADWRVS-GDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELV 180
Query: 61 TSGKMFTSAEALKVGLIDEEVTSEE 85
SG+ F + EAL +GLID+ V ++
Sbjct: 181 FSGRFFDAEEALALGLIDDMVAPDD 205
>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) From Geobacillus Kaustophilus Hta426
pdb|2QQ3|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|G Chain G, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|H Chain H, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|I Chain I, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|J Chain J, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|K Chain K, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|L Chain L, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
Length = 258
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G A G G + A+SC+ I+ G E +G++ + +GP++ L
Sbjct: 102 VNGLALGGGFELALSCDL-IVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWL 160
Query: 61 TSGKMFTSAEALKVGLIDEEVTSE---EEAITRAETFLAQYATIPGAARKLTKLMLREKT 117
+G ++ EA ++G+++ V+ E EE + A + A P A +L K +++
Sbjct: 161 WTGARMSAKEAEQLGIVNRVVSPELLMEETMRLA----GRLAEQPPLALRLIKEAVQKAV 216
Query: 118 ISNLMENKEKDLKNVVDLITSPQVQKGLGLYLQSLKKK 155
L E + + KN L S ++G+ +L+ K +
Sbjct: 217 DYPLYEGMQFERKNFYLLFASEDQKEGMAAFLEKRKPR 254
>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|B Chain B, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 258
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G+A GAGC+ A+ C+ ++ G GL E +GI+ ++ ++G +
Sbjct: 102 VNGYALGAGCELALLCDV-VVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMV 160
Query: 61 TSGKMFTSAEALKVGLIDEEVTSE 84
SG+ T+ +A + GL+ + S+
Sbjct: 161 LSGESITAQQAQQAGLVSDVFPSD 184
>pdb|4HC8|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
pdb|4HC8|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
Length = 255
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
GHA G F +SC + Y I NE +G P+ ++ L + A
Sbjct: 104 GHAIAXGA-FLLSCGDHRVAAHAYNIQANEVAIGXTIPYAALEIXKLRLTRSAYQQATGL 162
Query: 63 GKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTISNL 121
K F AL G ID E+ E ++RAE ++A + A TKL R ++ +
Sbjct: 163 AKTFFGETALAAGFID-EIALPEVVVSRAEEAAREFAGLNQHAHAATKLRSRADALTAI 220
>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 16 CEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLG-PRQTELALTSGKMFTSAEALKV 74
C YRI K +GL E +GI+ + +G P +L +TSGK ++ EAL++
Sbjct: 128 CHYRI-ANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDL-ITSGKYLSADEALRL 185
Query: 75 GLIDEEVTSE--EEAITRAETFL 95
G++D V S+ EEAI A+ +
Sbjct: 186 GILDAVVKSDPVEEAIKFAQKII 208
>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 16 CEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLG-PRQTELALTSGKMFTSAEALKV 74
C YRI K +GL E +GI+ + +G P +L +TSGK ++ EAL++
Sbjct: 113 CHYRI-ANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDL-ITSGKYLSADEALRL 170
Query: 75 GLIDEEVTSE--EEAITRAETFL 95
G++D V S+ EEAI A+ +
Sbjct: 171 GILDAVVKSDPVEEAIKFAQKII 193
>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 715
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G A G G + ++ ++R+M IGL E K+GI F + +G +
Sbjct: 110 INGIALGGGLEMCLAADFRVM-ADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWI 168
Query: 61 TSGKMFTSAEALKVGLIDEEVTSEE 85
SGK + +ALKV +D VT+++
Sbjct: 169 ASGKENRAEDALKVSAVDAVVTADK 193
>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
G AP C A+ + + T GL+E GI M T+G RQ+ + +
Sbjct: 121 GFAPLVACDLAICAD-------EATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMT 173
Query: 63 GKMFTSAEALKVGLIDEEV 81
GK F +A ++GL++E V
Sbjct: 174 GKTFGGQKAAEMGLVNESV 192
>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|B Chain B, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|D Chain D, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
G AP C A+ + + T GL+E GI M T+G RQ+ + +
Sbjct: 121 GFAPLVACDLAICAD-------EATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMT 173
Query: 63 GKMFTSAEALKVGLIDEEV 81
GK F +A ++GL++E V
Sbjct: 174 GKTFGGQKAAEMGLVNESV 192
>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 275
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
G AP C A+ + + T GL+E GI M T+G RQ+ + +
Sbjct: 121 GFAPLVACDLAICAD-------EATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMT 173
Query: 63 GKMFTSAEALKVGLIDEEV 81
GK F +A ++GL++E V
Sbjct: 174 GKTFGGQKAAEMGLVNESV 192
>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
G AP C A+ + + T GL+E GI M T+G RQ+ + +
Sbjct: 121 GFAPLVACDLAICAD-------EATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMT 173
Query: 63 GKMFTSAEALKVGLIDEEV 81
GK F +A ++GL++E V
Sbjct: 174 GKTFGGQKAAEMGLVNESV 192
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
G +P C A+ + + T GL+E GI M T+G RQ+ + + +
Sbjct: 121 GFSPLVACDLAICAD-------EATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMT 173
Query: 63 GKMFTSAEALKVGLIDEEV 81
GK F +A ++GL++E V
Sbjct: 174 GKTFGGQKAAEMGLVNESV 192
>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|C Chain C, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|D Chain D, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|E Chain E, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|F Chain F, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|G Chain G, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|H Chain H, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|J Chain J, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|K Chain K, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|L Chain L, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2VSS|A Chain A, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|B Chain B, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|C Chain C, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|D Chain D, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
G +P C A+ + + T GL+E GI M T+G RQ+ + +
Sbjct: 121 GFSPLVACDLAICAD-------EATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMT 173
Query: 63 GKMFTSAEALKVGLIDEEV 81
GK F +A ++GL++E V
Sbjct: 174 GKTFGGQKAAEMGLVNESV 192
>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
G +P C A+ + + T GL+E GI M T+G RQ+ + +
Sbjct: 121 GFSPLVACDLAICAD-------EATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMT 173
Query: 63 GKMFTSAEALKVGLIDEEV 81
GK F +A ++GL++E V
Sbjct: 174 GKTFGGQKAAEMGLVNESV 192
>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
G +P C A+ + + T GL+E GI M T+G RQ+ + +
Sbjct: 121 GFSPLVACDLAICAD-------EATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMT 173
Query: 63 GKMFTSAEALKVGLIDEEV 81
GK F +A ++GL++E V
Sbjct: 174 GKTFGGQKAAEMGLVNESV 192
>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 3 GHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTS 62
G +P C A+ + + T GL+E GI M T+G RQ+ + +
Sbjct: 121 GFSPLVACDLAICAD-------EATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMT 173
Query: 63 GKMFTSAEALKVGLIDEEV 81
GK F +A ++GL++E V
Sbjct: 174 GKTFGGQKAAEMGLVNESV 192
>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|B Chain B, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|C Chain C, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
Length = 273
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G A G G + A++ + ++ + GL E K G+IA V +V L PR+ L L
Sbjct: 114 VNGTALGGGSELALASDL-VIACESASFGLPEVKRGLIAGAGGVFRIVEQL-PRKVALEL 171
Query: 61 T-SGKMFTSAEALKVGLIDEEV 81
+G+ T+++AL+ GLI+E V
Sbjct: 172 VLTGEPMTASDALRWGLINEVV 193
>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 16 CEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLG-PRQTELALTSGKMFTSAEALKV 74
C YRI K +GL +GI+ + +G P +L +TSGK ++ EAL++
Sbjct: 128 CHYRI-ANAKARVGLPAVTLGILPGARGTQLLPRVVGVPVALDL-ITSGKYLSADEALRL 185
Query: 75 GLIDEEVTSE--EEAITRAETFL 95
G++D V S+ EEAI A+ +
Sbjct: 186 GILDAVVKSDPVEEAIKFAQKII 208
>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
Length = 258
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G+A G GC+ AM C+ ++ G E K+G++ + +G + +
Sbjct: 102 VAGYALGGGCELAMMCDV-LIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLI 160
Query: 61 TSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTISN 120
+G+ +AEA + GL+ V ++ +T A + + +A ++ K + S+
Sbjct: 161 LTGRTMDAAEAERSGLV-SRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESS 219
Query: 121 LME 123
L E
Sbjct: 220 LSE 222
>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 278
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G+A G GC+ AM C+ ++ G E K+G++ + +G + +
Sbjct: 122 VAGYALGGGCELAMMCDV-LIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLI 180
Query: 61 TSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTISN 120
+G+ +AEA + GL+ V ++ +T A + + +A ++ K + S+
Sbjct: 181 LTGRTMDAAEAERSGLV-SRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESS 239
Query: 121 LMEN 124
L E
Sbjct: 240 LSEG 243
>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3Q0G|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
Length = 257
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G+A G GC+ AM C+ ++ G E K+G++ + +G + +
Sbjct: 101 VAGYALGGGCELAMMCDV-LIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLI 159
Query: 61 TSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTISN 120
+G+ +AEA + GL+ V ++ +T A + + +A ++ K + S+
Sbjct: 160 LTGRTMDAAEAERSGLV-SRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESS 218
Query: 121 LME 123
L E
Sbjct: 219 LSE 221
>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycob Smegmatis
Length = 263
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLG-PRQTELA 59
+ G+A G GC+ AM C+ ++ G E +GI+ + +G + +L
Sbjct: 107 VAGYALGGGCELAMLCDL-VIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLC 165
Query: 60 LTSGKMFTSAEALKVGLIDEEVTSEE 85
LT G+ T+ EA +VGL+ V + +
Sbjct: 166 LT-GRSLTAEEAERVGLVSRIVPAAD 190
>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|E Chain E, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|F Chain F, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis
Length = 265
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G A G G + +++C++RI ++GL ET + II + +G + + +
Sbjct: 109 INGIALGGGTELSLACDFRI-AAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELI 167
Query: 61 TSGKMFTSAEALKVGLIDEEVTS---EEEAITRAE 92
+G+ ++ EA + GL++ V EE+AI AE
Sbjct: 168 YTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAE 202
>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 264
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G A GAG Q AM C+ R+ V P +K G+ W + + +G + L
Sbjct: 114 INGPAIGAGLQLAMQCDLRV-VAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAML 172
Query: 61 TSGKMFTSAEALKVGLID 78
S + T+ AL G+ +
Sbjct: 173 LSAEKLTAEIALHTGMAN 190
>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|B Chain B, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|C Chain C, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|D Chain D, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|E Chain E, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|F Chain F, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
Length = 258
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G+A G GC+ AM C+ I G K G E +G I + +G +
Sbjct: 102 VNGYALGGGCELAMMCDI-IYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMV 160
Query: 61 TSGKMFTSAEALKVGLIDEEVTSE---EEAITRAE 92
+G ++ +A + GL+ + E EEAI AE
Sbjct: 161 LTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAE 195
>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|B Chain B, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|C Chain C, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|D Chain D, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|E Chain E, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|F Chain F, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|2DUB|A Chain A, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|B Chain B, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|C Chain C, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|D Chain D, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|E Chain E, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|F Chain F, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
Length = 261
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G+A G GC+ AM C+ I G K G E +G I + +G +
Sbjct: 105 VNGYALGGGCELAMMCDI-IYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMV 163
Query: 61 TSGKMFTSAEALKVGLIDEEVTSE---EEAITRAE 92
+G ++ +A + GL+ + E EEAI AE
Sbjct: 164 LTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAE 198
>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|B Chain B, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|C Chain C, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|D Chain D, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|E Chain E, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|F Chain F, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
Length = 260
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G+A G GC+ AM C+ I G K G E +G I + +G +
Sbjct: 104 VNGYALGGGCELAMMCDI-IYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMV 162
Query: 61 TSGKMFTSAEALKVGLIDEEVTSE---EEAITRAE 92
+G ++ +A + GL+ + E EEAI AE
Sbjct: 163 LTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAE 197
>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 267
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ GH G +C+ + GP+ + L E ++G+ AP T++ L R
Sbjct: 115 IDGHVRAGGFGLVGACDIAV-AGPRSSFALTEARIGV-APAIISLTLLPKLSARAAARYY 172
Query: 61 TSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTISN 120
+G+ F + A ++GLI + AI + T + + + AA K T +
Sbjct: 173 LTGEKFDARRAEEIGLITMAAEDLDAAIDQLVTDVGRGSPQGLAASKAL-------TTAA 225
Query: 121 LMENKEKDLKNVVD----LITSPQVQKGLGLYLQ 150
++E ++D + + + L S + ++G+ +L+
Sbjct: 226 VLERFDRDAERLAEESARLFVSDEAREGMLAFLE 259
>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|B Chain B, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|C Chain C, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|D Chain D, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|E Chain E, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|F Chain F, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
Length = 286
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELAL 60
+ G+A G GC+ AM C+ I G K E +G I + +G +
Sbjct: 130 VNGYAFGGGCELAMMCDI-IYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMV 188
Query: 61 TSGKMFTSAEALKVGLIDEEVTSE---EEAITRAE 92
+G ++ +A + GL+ + E EEAI AE
Sbjct: 189 LTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAE 223
>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|B Chain B, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|C Chain C, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|D Chain D, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|E Chain E, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|F Chain F, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 282
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 49 HT--LGPRQTELALTSGKMFTSAEALKVGLIDEEVTSEE-EAITRAETFLAQYATIPGAA 105
HT LGPR+ + L +G+ T+ EA + G+++ V +E +A TR Q AT+P A
Sbjct: 170 HTWELGPRKAKEILFTGRALTAEEAERTGMVNRVVARDELDAQTR--ELAEQIATMPPFA 227
Query: 106 RKLTK 110
+ K
Sbjct: 228 LRQAK 232
>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|B Chain B, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|C Chain C, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
Length = 267
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELA- 59
+ G A G G + A++ + ++ + GL E K G+IA V + L PR+ +
Sbjct: 108 VNGTALGGGTELALASDL-VVADERAQFGLPEVKRGLIAAAGGVFRIAEQL-PRKVAMRL 165
Query: 60 LTSGKMFTSAEALKVGLIDEEVTS 83
L +G+ ++A A GLI+E V +
Sbjct: 166 LLTGEPLSAAAARDWGLINEVVEA 189
>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|B Chain B, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|C Chain C, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
Length = 267
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELA- 59
+ G A G G + A++ + ++ + GL E K G+IA V + L PR+ +
Sbjct: 108 VNGTALGGGTELALASDL-VVADERAQFGLPEVKRGLIAAAGGVFRIAEQL-PRKVAMRL 165
Query: 60 LTSGKMFTSAEALKVGLIDEEVTS 83
L +G+ ++A A GLI+E V +
Sbjct: 166 LLTGEPLSAAAARDWGLINEVVEA 189
>pdb|3H0U|A Chain A, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|B Chain B, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|C Chain C, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
Length = 289
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLG-PRQTELA 59
++G A GAG +F ++C+ R +G E +G + + LG R E
Sbjct: 110 LRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAV 169
Query: 60 LTSGKMFTSAEALKVGLIDEEVTSEE 85
LTS F + A + G ++ V E
Sbjct: 170 LTSSD-FDADLAERYGWVNRAVPDAE 194
>pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
Length = 725
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 14 MSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLG-PRQTELALTSGKMFTSAEAL 72
M+C RI P +GL E ++G+I F + +G + E+ LTS K + E
Sbjct: 122 MACHARIS-APAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTS-KPVKAEEGH 179
Query: 73 KVGLIDEEVTSEE 85
+GLID V E
Sbjct: 180 SLGLIDAVVPPAE 192
>pdb|3BPQ|B Chain B, Crystal Structure Of Relb-Rele Antitoxin-Toxin Complex
From Methanococcus Jannaschii
pdb|3BPQ|D Chain D, Crystal Structure Of Relb-Rele Antitoxin-Toxin Complex
From Methanococcus Jannaschii
Length = 88
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 91 AETFLAQYATIPGAARKLTKLMLREKTISNLMENKEKDLKNV 132
A+TF+ +PG RK KL++ E SN + + + D+K +
Sbjct: 6 AKTFVKDLKHVPGHIRKRIKLIIEECQNSNSLNDLKLDIKKI 47
>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
Length = 255
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGP------R 54
+ G A G GC A++C+ ++ P L T++G++ D L P R
Sbjct: 99 VHGAAVGFGCSLALACDL-VVAAPASYFQLAFTRVGLMP-----DGGASALLPLLIGRAR 152
Query: 55 QTELALTSGKMFTSAEALKVGLIDEEVTSEEE 86
+ +A+T+ K+ ++A A + G+I +TS +E
Sbjct: 153 TSRMAMTAEKI-SAATAFEWGMI-SHITSADE 182
>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From
Mycobacterium Marinum
Length = 298
Score = 29.3 bits (64), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 17/93 (18%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPF---WFVDTMVHTLGPRQTE 57
+ G G G A+ C+ R + G+IA F W + PR T
Sbjct: 137 INGPCVGIGLTQALMCDVRFAAA-GAKFAAVFARRGLIAEFGISWIL--------PRLTS 187
Query: 58 LA-----LTSGKMFTSAEALKVGLIDEEVTSEE 85
A L SG+ F + EA ++GL+ E VT E+
Sbjct: 188 WAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQ 220
>pdb|1O8U|A Chain A, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|B Chain B, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|C Chain C, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|D Chain D, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|E Chain E, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|F Chain F, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
Length = 257
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 49 HTLGPRQTELALTSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKL 108
H LG + L +G+ + AL G ++E V SE+E + RA A P AR+
Sbjct: 162 HVLGSNRGRYFLLTGQELDARTALDYGAVNE-VLSEQELLPRAWELARGIAEKPLLARRY 220
Query: 109 TKLML 113
+ +L
Sbjct: 221 ARKVL 225
>pdb|1SZO|A Chain A, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|B Chain B, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|C Chain C, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|D Chain D, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|E Chain E, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|F Chain F, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|G Chain G, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|H Chain H, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|I Chain I, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|J Chain J, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|K Chain K, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|L Chain L, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
Length = 257
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 49 HTLGPRQTELALTSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKL 108
H LG + L +G+ + AL G ++E V SE+E + RA A P AR+
Sbjct: 162 HVLGSNRGRYFLLTGQELDARTALDYGAVNE-VLSEQELLPRAWELARGIAEKPLLARRY 220
Query: 109 TKLML 113
+ +L
Sbjct: 221 ARKVL 225
>pdb|3K1Q|C Chain C, Backbone Model Of An Aquareovirus Virion By Cryo-Electron
Microscopy And Bioinformatics
Length = 1196
Score = 27.3 bits (59), Expect = 3.6, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 78 DEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTISNLMENKEKDLKNVVDLIT 137
D V + + ++R AQ+ P A R LML + T+SNL NK + V IT
Sbjct: 250 DSSVHAYKTVLSRGYIDNAQFN--PLALRSNVLLMLLQFTLSNLKINKSSTFTSDVTTIT 307
Query: 138 S 138
S
Sbjct: 308 S 308
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 15/86 (17%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGP-KYTIGLNETKMGIIAPFWFVDTMVHTLGPR----- 54
+ GHA G G A+ + RI+ +Y I + + G +AP D + H PR
Sbjct: 105 VNGHAIGIGMTLALHADIRILAEEGRYAI--PQVRFG-VAP----DALAHWTLPRLVGTA 157
Query: 55 -QTELALTSGKMFTSAEALKVGLIDE 79
EL LT G F++ A++ GL +
Sbjct: 158 VAAELLLT-GASFSAQRAVETGLANR 182
>pdb|3IYL|X Chain X, Atomic Cryoem Structure Of A Nonenveloped Virus Suggests
How Penetration Protein Is Primed For Cell Entry
pdb|3IYL|Y Chain Y, Atomic Cryoem Structure Of A Nonenveloped Virus Suggests
How Penetration Protein Is Primed For Cell Entry
Length = 1214
Score = 27.3 bits (59), Expect = 3.7, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 78 DEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTISNLMENKEKDLKNVVDLIT 137
D V + + ++R AQ+ P A R LML + T+SNL NK + V IT
Sbjct: 268 DSSVHAYKTVLSRGYIDNAQFN--PLALRSNVLLMLLQFTLSNLKINKSSTFTSDVTTIT 325
Query: 138 S 138
S
Sbjct: 326 S 326
>pdb|3K1Q|B Chain B, Backbone Model Of An Aquareovirus Virion By Cryo-Electron
Microscopy And Bioinformatics
Length = 1027
Score = 27.3 bits (59), Expect = 3.7, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 78 DEEVTSEEEAITRAETFLAQYATIPGAARKLTKLMLREKTISNLMENKEKDLKNVVDLIT 137
D V + + ++R AQ+ P A R LML + T+SNL NK + V IT
Sbjct: 81 DSSVHAYKTVLSRGYIDNAQFN--PLALRSNVLLMLLQFTLSNLKINKSSTFTSDVTTIT 138
Query: 138 S 138
S
Sbjct: 139 S 139
>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|C Chain C, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|D Chain D, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|E Chain E, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|F Chain F, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
Length = 279
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 49 HT--LGPRQTELALTSGKMFTSAEALKVGLIDEEVTSEE-EAITRA 91
HT LGPR+ + L +G+ T+ E + G+++ V + +A TRA
Sbjct: 167 HTWELGPRKAKEILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRA 212
>pdb|1E3H|A Chain A, Semet Derivative Of Streptomyces Antibioticus PnpaseGPSI
Enzyme
Length = 757
Score = 26.6 bits (57), Expect = 6.1, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 68 SAEALKVGLIDEEVTSEEEAITRAETFLAQY----ATIPGAARKLTKLMLREKTISNLME 123
SA G D E + AE L ++ I A R LTK ++RE+ I+ E
Sbjct: 297 SAALTIAGKQDREAELDRVKALAAEKLLPEFEGREKEISAAYRALTKSLVRERVIA---E 353
Query: 124 NKEKDLKNVVDLIT 137
K D + V D+ T
Sbjct: 354 KKRIDGRGVTDIRT 367
>pdb|4H6X|A Chain A, Structure Of Patellamide Maturation Protease Patg
pdb|4H6X|B Chain B, Structure Of Patellamide Maturation Protease Patg
Length = 357
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 68 SAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKL 108
AEA++ L+ + + E + E L + IPGA + L
Sbjct: 299 DAEAVRTALLKTAIPCDPEVVEEPERCLRGFVNIPGAMKVL 339
>pdb|2ZII|A Chain A, Crystal Structure Of Yeast Vps74-N-Term Truncation Variant
pdb|2ZII|B Chain B, Crystal Structure Of Yeast Vps74-N-Term Truncation Variant
pdb|2ZII|C Chain C, Crystal Structure Of Yeast Vps74-N-Term Truncation Variant
pdb|2ZII|D Chain D, Crystal Structure Of Yeast Vps74-N-Term Truncation Variant
Length = 288
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 58 LALTSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKLTKL 111
LAL G A L+ L E ++AI+RAE +AQ++ P K T+L
Sbjct: 196 LALICGSY--GANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLEKETEL 247
>pdb|2Q5C|A Chain A, Crystal Structure Of Ntrc Family Transcriptional Regulator
From Clostridium Acetobutylicum
pdb|2Q5C|D Chain D, Crystal Structure Of Ntrc Family Transcriptional Regulator
From Clostridium Acetobutylicum
Length = 196
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 4 HAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGI-IAPFWF-----VDTMVHTLGPRQTE 57
+A G + A+ Y+ + K+ I E +G+ I F F + T++ + +
Sbjct: 89 NAKRFGNELAL-IAYKHSIVDKHEI---EAMLGVKIKEFLFSSEDEITTLISKVKTENIK 144
Query: 58 LALTSGKMFTSAEALKVGLIDEEVTSEEEAITRA 91
+ + SGK T EA+K GL E + S EE++ RA
Sbjct: 145 IVV-SGKTVTD-EAIKQGLYGETINSGEESLRRA 176
>pdb|2ZIH|A Chain A, Crystal Structure Of Yeast Vps74
pdb|2ZIH|B Chain B, Crystal Structure Of Yeast Vps74
pdb|2ZIH|C Chain C, Crystal Structure Of Yeast Vps74
pdb|2ZIH|D Chain D, Crystal Structure Of Yeast Vps74
Length = 347
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 58 LALTSGKMFTSAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKLTKL 111
LAL G A L+ L E ++AI+RAE +AQ++ P K T+L
Sbjct: 255 LALICGSY--GANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLEKETEL 306
>pdb|4AKS|A Chain A, Patg Macrocyclase Domain
pdb|4AKS|B Chain B, Patg Macrocyclase Domain
Length = 360
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 68 SAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKL 108
AEA++ L+ + + E + E L + IPGA + L
Sbjct: 317 DAEAVRTALLKTAIPCDPEVVEEPERCLRGFVNIPGAMKVL 357
>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|B Chain B, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|C Chain C, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|D Chain D, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|E Chain E, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|F Chain F, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|G Chain G, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|H Chain H, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|I Chain I, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
Length = 287
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 18/93 (19%)
Query: 1 MKGHAPGAGCQFAMSCEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLG-------P 53
+ G A AGCQ SC+ I + K P V T G P
Sbjct: 133 VNGLATAAGCQLVASCD----------IAVASDKSSFATPGVNVGLFCSTPGVALARAVP 182
Query: 54 RQTELA-LTSGKMFTSAEALKVGLIDEEVTSEE 85
R+ L L +G+ ++ EAL GL+ + V E
Sbjct: 183 RKVALEMLFTGEPISAQEALLHGLLSKVVPEAE 215
>pdb|4AKT|A Chain A, Patg Macrocyclase In Complex With Peptide
pdb|4AKT|B Chain B, Patg Macrocyclase In Complex With Peptide
Length = 360
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 68 SAEALKVGLIDEEVTSEEEAITRAETFLAQYATIPGAARKL 108
AEA++ L+ + + E + E L + IPGA + L
Sbjct: 317 DAEAVRTALLKTAIPCDPEVVEEPERCLRGFVNIPGAMKVL 357
>pdb|1HZD|A Chain A, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|B Chain B, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|C Chain C, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|D Chain D, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|E Chain E, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|F Chain F, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|2ZQQ|A Chain A, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|B Chain B, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|C Chain C, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|D Chain D, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|E Chain E, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|F Chain F, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQR|A Chain A, Crystal Structure Of Auh Without Rna
pdb|2ZQR|B Chain B, Crystal Structure Of Auh Without Rna
pdb|2ZQR|C Chain C, Crystal Structure Of Auh Without Rna
pdb|2ZQR|D Chain D, Crystal Structure Of Auh Without Rna
pdb|2ZQR|E Chain E, Crystal Structure Of Auh Without Rna
pdb|2ZQR|F Chain F, Crystal Structure Of Auh Without Rna
Length = 272
Score = 25.8 bits (55), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 16 CEYRIMVGPKYTIGLNETKMGIIAPFWFVDTMVHTLGPRQTELALTSGKMFTSAEALKVG 75
C+ R+ +GL ETK+ II + +G + + S ++ EA VG
Sbjct: 127 CDIRV-AASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVG 185
Query: 76 LIDEEVTSEEE-------AITRAETFLAQ 97
LI + +E A+ A FL Q
Sbjct: 186 LISHVLEQNQEGDAAYRKALDLAREFLPQ 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,025,885
Number of Sequences: 62578
Number of extensions: 135240
Number of successful extensions: 434
Number of sequences better than 100.0: 70
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 381
Number of HSP's gapped (non-prelim): 70
length of query: 155
length of database: 14,973,337
effective HSP length: 91
effective length of query: 64
effective length of database: 9,278,739
effective search space: 593839296
effective search space used: 593839296
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)