Query psy15244
Match_columns 1427
No_of_seqs 1212 out of 7450
Neff 6.8
Searched_HMMs 29240
Date Sat Aug 17 01:02:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15244.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15244hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbl_A Pyruvate carboxylase; T 100.0 6E-221 2E-225 2167.0 101.5 1135 55-1426 2-1146(1150)
2 2qf7_A Pyruvate carboxylase pr 100.0 2E-209 8E-214 2061.2 101.2 1135 55-1426 12-1164(1165)
3 3bg3_A Pyruvate carboxylase, m 100.0 4E-141 1E-145 1331.5 55.7 705 488-1426 8-718 (718)
4 2nx9_A Oxaloacetate decarboxyl 100.0 7.2E-98 2E-102 900.5 42.7 450 655-1201 4-458 (464)
5 1rqb_A Transcarboxylase 5S sub 100.0 2.7E-95 9E-100 887.0 38.9 444 653-1198 19-468 (539)
6 3jrx_A Acetyl-COA carboxylase 100.0 4E-83 1.4E-87 796.2 46.6 450 54-510 53-561 (587)
7 3glk_A Acetyl-COA carboxylase 100.0 1.3E-81 4.4E-86 780.9 40.0 445 54-505 37-539 (540)
8 3u9t_A MCC alpha, methylcroton 100.0 2E-80 6.8E-85 788.5 39.9 452 55-512 26-479 (675)
9 3n6r_A Propionyl-COA carboxyla 100.0 4.3E-81 1.5E-85 795.4 31.1 452 56-513 1-473 (681)
10 3ouz_A Biotin carboxylase; str 100.0 2.6E-76 8.8E-81 722.8 50.7 445 53-505 2-446 (446)
11 3va7_A KLLA0E08119P; carboxyla 100.0 5.7E-72 2E-76 742.7 39.5 445 52-505 26-471 (1236)
12 2dzd_A Pyruvate carboxylase; b 100.0 1.9E-68 6.5E-73 655.9 50.2 454 55-510 4-460 (461)
13 1ulz_A Pyruvate carboxylase N- 100.0 1.6E-66 5.6E-71 636.9 48.5 450 56-512 1-450 (451)
14 2vpq_A Acetyl-COA carboxylase; 100.0 7.1E-66 2.4E-70 631.2 50.1 443 57-505 1-444 (451)
15 1w96_A ACC, acetyl-coenzyme A 100.0 2E-66 6.9E-71 650.9 46.2 443 55-504 45-552 (554)
16 2w70_A Biotin carboxylase; lig 100.0 1.6E-64 5.4E-69 618.9 48.6 442 56-505 1-443 (449)
17 3rmj_A 2-isopropylmalate synth 100.0 5.5E-61 1.9E-65 566.9 27.4 333 655-1025 9-370 (370)
18 2ztj_A Homocitrate synthase; ( 100.0 3.9E-57 1.3E-61 538.7 28.7 336 656-1028 1-356 (382)
19 3ivs_A Homocitrate synthase, m 100.0 1.2E-56 4.2E-61 533.6 23.1 335 651-1024 32-386 (423)
20 3eeg_A 2-isopropylmalate synth 100.0 2.8E-56 9.7E-61 519.6 24.6 290 655-979 3-317 (325)
21 1nvm_A HOA, 4-hydroxy-2-oxoval 100.0 1.6E-56 5.5E-61 528.0 22.8 328 654-1052 4-340 (345)
22 3ble_A Citramalate synthase fr 100.0 1.9E-55 6.5E-60 516.3 28.5 298 656-987 17-336 (337)
23 3hq1_A 2-isopropylmalate synth 100.0 1.4E-50 4.8E-55 497.4 29.8 330 656-1012 69-447 (644)
24 4dim_A Phosphoribosylglycinami 100.0 6.3E-49 2.2E-53 473.9 41.9 388 55-473 5-401 (403)
25 3dxi_A Putative aldolase; TIM 100.0 2.1E-49 7.2E-54 458.6 19.9 282 658-972 2-290 (320)
26 1ydo_A HMG-COA lyase; TIM-barr 100.0 2.7E-48 9.4E-53 449.4 25.1 275 656-955 4-298 (307)
27 1a9x_A Carbamoyl phosphate syn 100.0 8.8E-47 3E-51 503.8 40.4 434 52-531 2-478 (1073)
28 3ewb_X 2-isopropylmalate synth 100.0 1.9E-47 6.5E-52 439.6 26.4 263 656-949 3-286 (293)
29 2ftp_A Hydroxymethylglutaryl-C 100.0 3.5E-46 1.2E-50 432.5 27.6 273 655-952 5-297 (302)
30 2cw6_A Hydroxymethylglutaryl-C 100.0 4.3E-46 1.5E-50 431.1 28.3 273 657-954 4-296 (298)
31 3vot_A L-amino acid ligase, BL 100.0 1.5E-44 5.1E-49 439.1 37.5 400 55-479 3-419 (425)
32 4ffl_A PYLC; amino acid, biosy 100.0 4.5E-45 1.6E-49 434.5 31.9 356 57-473 1-358 (363)
33 1kjq_A GART 2, phosphoribosylg 100.0 1.3E-43 4.6E-48 425.6 42.0 382 55-474 9-391 (391)
34 2dwc_A PH0318, 433AA long hypo 100.0 5.3E-43 1.8E-47 426.5 40.0 395 55-477 17-418 (433)
35 3aw8_A PURK, phosphoribosylami 100.0 9.7E-42 3.3E-46 406.7 40.4 359 59-471 1-361 (369)
36 1ydn_A Hydroxymethylglutaryl-C 100.0 4.1E-43 1.4E-47 406.0 27.6 265 657-948 3-289 (295)
37 4e4t_A Phosphoribosylaminoimid 100.0 2E-41 6.9E-46 410.3 40.3 374 56-472 34-416 (419)
38 3k5i_A Phosphoribosyl-aminoimi 100.0 4.2E-41 1.4E-45 406.0 39.3 373 56-470 23-398 (403)
39 3ax6_A Phosphoribosylaminoimid 100.0 3.5E-40 1.2E-44 394.8 39.2 368 57-474 1-372 (380)
40 3vmm_A Alanine-anticapsin liga 100.0 7.2E-40 2.5E-44 402.2 34.9 376 81-473 52-467 (474)
41 2yw2_A Phosphoribosylamine--gl 100.0 4.1E-39 1.4E-43 391.1 37.3 381 59-480 2-415 (424)
42 2ip4_A PURD, phosphoribosylami 100.0 1.5E-38 5.2E-43 385.3 41.5 376 59-481 2-409 (417)
43 2qk4_A Trifunctional purine bi 100.0 3.6E-39 1.2E-43 395.0 35.7 394 55-481 22-445 (452)
44 3q2o_A Phosphoribosylaminoimid 100.0 5.9E-38 2E-42 376.9 43.5 361 56-466 13-375 (389)
45 2z04_A Phosphoribosylaminoimid 100.0 3.2E-39 1.1E-43 384.3 31.3 361 57-477 1-362 (365)
46 1vkz_A Phosphoribosylamine--gl 100.0 1.2E-38 4.1E-43 385.8 32.6 379 56-479 14-410 (412)
47 3eth_A Phosphoribosylaminoimid 100.0 3.6E-38 1.2E-42 372.9 35.0 336 57-470 1-339 (355)
48 3orq_A N5-carboxyaminoimidazol 100.0 1.2E-37 4.2E-42 372.6 36.4 361 55-467 10-373 (377)
49 3mjf_A Phosphoribosylamine--gl 100.0 1.5E-36 5E-41 369.3 40.6 399 57-481 3-424 (431)
50 3lp8_A Phosphoribosylamine-gly 100.0 1.2E-36 4.1E-41 371.2 36.3 393 56-480 20-438 (442)
51 2yrx_A Phosphoribosylglycinami 100.0 5.3E-36 1.8E-40 366.8 40.8 386 56-480 20-434 (451)
52 2xcl_A Phosphoribosylamine--gl 100.0 2.3E-36 7.8E-41 366.8 34.9 388 59-481 2-414 (422)
53 1a9x_A Carbamoyl phosphate syn 100.0 5.1E-36 1.7E-40 400.2 38.2 366 56-467 558-935 (1073)
54 2pn1_A Carbamoylphosphate synt 100.0 1.2E-32 4E-37 323.0 28.8 292 56-378 3-300 (331)
55 4fu0_A D-alanine--D-alanine li 100.0 6.9E-33 2.4E-37 329.2 19.8 301 57-370 3-342 (357)
56 4eg0_A D-alanine--D-alanine li 100.0 1.4E-30 4.9E-35 304.1 27.5 279 55-372 11-311 (317)
57 1ehi_A LMDDL2, D-alanine:D-lac 100.0 2E-29 6.9E-34 301.5 32.4 302 57-374 3-353 (377)
58 1iow_A DD-ligase, DDLB, D-ALA\ 100.0 1.5E-29 5.2E-34 292.7 27.9 273 56-372 1-302 (306)
59 2i87_A D-alanine-D-alanine lig 100.0 6E-30 2.1E-34 304.6 24.0 299 57-370 3-336 (364)
60 3i12_A D-alanine-D-alanine lig 100.0 1.4E-29 4.8E-34 301.5 25.1 234 128-371 96-346 (364)
61 3e5n_A D-alanine-D-alanine lig 100.0 2E-29 6.9E-34 302.1 25.8 234 128-371 115-365 (386)
62 3k3p_A D-alanine--D-alanine li 100.0 9E-29 3.1E-33 295.8 26.8 299 57-371 37-367 (383)
63 3r5x_A D-alanine--D-alanine li 100.0 1.3E-28 4.6E-33 285.6 26.0 271 58-372 4-295 (307)
64 3tqt_A D-alanine--D-alanine li 100.0 1.8E-28 6.3E-33 292.1 27.0 233 129-371 97-347 (372)
65 1e4e_A Vancomycin/teicoplanin 100.0 5E-29 1.7E-33 294.3 19.4 297 57-372 3-337 (343)
66 3se7_A VANA; alpha-beta struct 100.0 4.3E-29 1.5E-33 295.3 18.1 288 68-371 23-336 (346)
67 3lwb_A D-alanine--D-alanine li 100.0 3.1E-28 1.1E-32 290.5 24.2 230 130-370 109-360 (373)
68 2fb9_A D-alanine:D-alanine lig 100.0 1.4E-27 4.7E-32 279.7 24.7 231 128-371 74-316 (322)
69 1uc8_A LYSX, lysine biosynthes 99.9 5.6E-27 1.9E-31 267.2 22.9 272 60-375 2-278 (280)
70 2pvp_A D-alanine-D-alanine lig 99.9 1.1E-26 3.9E-31 276.4 18.4 231 130-377 107-349 (367)
71 2r85_A PURP protein PF1517; AT 99.9 9.9E-26 3.4E-30 264.0 23.6 263 57-352 2-291 (334)
72 2r7k_A 5-formaminoimidazole-4- 99.9 5.3E-25 1.8E-29 260.4 21.2 267 58-354 19-320 (361)
73 3df7_A Putative ATP-grAsp supe 99.9 1.1E-22 3.8E-27 236.3 22.1 210 119-371 60-271 (305)
74 2pbz_A Hypothetical protein; N 99.9 2.3E-23 8E-28 242.0 10.1 250 59-352 4-272 (320)
75 1gsa_A Glutathione synthetase; 99.8 8.4E-20 2.9E-24 211.4 19.2 287 58-374 2-311 (316)
76 3ln7_A Glutathione biosynthesi 99.8 1.8E-19 6.2E-24 230.0 11.2 240 117-374 433-754 (757)
77 1z2n_X Inositol 1,3,4-trisphos 99.8 1.8E-18 6.1E-23 202.0 13.9 242 57-352 11-302 (324)
78 3bg3_A Pyruvate carboxylase, m 99.8 1.6E-17 5.4E-22 209.9 21.7 175 1121-1389 543-718 (718)
79 3hbl_A Pyruvate carboxylase; T 99.7 3.5E-17 1.2E-21 218.1 25.6 172 1125-1390 976-1147(1150)
80 1wr2_A Hypothetical protein PH 99.7 1.4E-17 4.8E-22 186.5 11.8 177 170-351 20-219 (238)
81 3ln6_A Glutathione biosynthesi 99.7 8.3E-18 2.8E-22 215.3 9.9 241 118-373 429-747 (750)
82 2qf7_A Pyruvate carboxylase pr 99.7 2E-15 6.9E-20 201.8 30.8 172 1125-1389 993-1164(1165)
83 1i7n_A Synapsin II; synapse, p 99.6 2E-14 7E-19 165.8 21.8 218 130-371 68-302 (309)
84 1pk8_A RAT synapsin I; ATP bin 99.6 3.1E-14 1.1E-18 168.7 21.6 219 130-372 180-415 (422)
85 2p0a_A Synapsin-3, synapsin II 99.6 5.7E-14 2E-18 163.9 21.7 220 130-373 85-321 (344)
86 2cqy_A Propionyl-COA carboxyla 99.6 1.5E-15 5.3E-20 148.0 4.9 105 167-271 4-108 (108)
87 2q7d_A Inositol-tetrakisphosph 99.5 4E-14 1.4E-18 166.8 16.8 231 65-350 31-312 (346)
88 3n6r_A Propionyl-COA carboxyla 99.5 3.3E-13 1.1E-17 172.1 18.1 101 1326-1426 577-681 (681)
89 2kcc_A Acetyl-COA carboxylase 99.4 1.8E-13 6.1E-18 128.1 6.7 71 1355-1426 3-73 (84)
90 2dn8_A Acetyl-COA carboxylase 99.4 1.4E-12 4.7E-17 126.2 9.3 74 1352-1426 12-85 (100)
91 1bdo_A Acetyl-COA carboxylase; 99.4 8.9E-13 3E-17 122.1 7.4 70 1357-1426 4-80 (80)
92 3u9t_A MCC alpha, methylcroton 99.3 2.3E-13 7.9E-18 173.4 4.3 74 1353-1426 598-671 (675)
93 1z6h_A Biotin/lipoyl attachmen 99.3 2.2E-12 7.5E-17 116.8 8.9 68 1359-1426 1-68 (72)
94 2fp4_B Succinyl-COA ligase [GD 99.3 7.7E-13 2.6E-17 157.8 7.3 169 171-350 4-210 (395)
95 3crk_C Dihydrolipoyllysine-res 99.3 2.5E-12 8.7E-17 121.1 8.3 64 1363-1426 17-81 (87)
96 1dcz_A Transcarboxylase 1.3S s 99.3 4.7E-12 1.6E-16 116.2 9.5 75 1352-1426 3-77 (77)
97 2nu8_B SCS-beta, succinyl-COA 99.3 1.9E-12 6.6E-17 154.3 7.6 170 171-351 4-204 (388)
98 1k8m_A E2 component of branche 99.3 4.5E-12 1.5E-16 120.9 7.8 64 1363-1426 16-79 (93)
99 1ghj_A E2, E2, the dihydrolipo 99.3 3.5E-12 1.2E-16 117.9 6.8 65 1362-1426 12-76 (79)
100 2d5d_A Methylmalonyl-COA decar 99.3 1E-11 3.4E-16 112.9 9.5 71 1356-1426 4-74 (74)
101 2l5t_A Lipoamide acyltransfera 99.2 5.6E-12 1.9E-16 115.8 6.6 65 1362-1426 12-76 (77)
102 2dnc_A Pyruvate dehydrogenase 99.2 6.2E-12 2.1E-16 121.0 6.7 63 1364-1426 20-83 (98)
103 2jku_A Propionyl-COA carboxyla 99.2 1.6E-12 5.6E-17 124.2 2.6 74 1353-1426 21-94 (94)
104 2dne_A Dihydrolipoyllysine-res 99.2 6.4E-12 2.2E-16 123.0 6.7 63 1364-1426 20-83 (108)
105 1y8o_B Dihydrolipoyllysine-res 99.2 1.4E-11 4.9E-16 123.7 8.2 63 1364-1426 40-103 (128)
106 3va7_A KLLA0E08119P; carboxyla 99.2 1.5E-11 5.1E-16 164.7 9.3 72 1354-1425 1164-1235(1236)
107 2ejm_A Methylcrotonoyl-COA car 99.2 2.8E-11 9.4E-16 116.8 8.5 72 1355-1426 12-83 (99)
108 1gjx_A Pyruvate dehydrogenase; 99.2 5.5E-12 1.9E-16 117.0 2.9 68 1359-1426 9-76 (81)
109 1qjo_A Dihydrolipoamide acetyl 99.2 3.3E-11 1.1E-15 111.5 7.2 62 1365-1426 14-75 (80)
110 1iyu_A E2P, dihydrolipoamide a 99.1 5.6E-11 1.9E-15 109.7 7.0 61 1365-1426 13-73 (79)
111 2k7v_A Dihydrolipoyllysine-res 99.1 6.2E-12 2.1E-16 117.9 -0.2 68 1359-1426 4-71 (85)
112 3t7a_A Inositol pyrophosphate 99.1 4.6E-11 1.6E-15 134.4 6.1 197 131-352 58-293 (330)
113 1pmr_A Dihydrolipoyl succinylt 99.1 3.6E-12 1.2E-16 118.1 -2.5 64 1363-1426 14-77 (80)
114 3ufx_B Succinyl-COA synthetase 99.0 1.6E-09 5.6E-14 129.4 13.7 108 171-280 4-116 (397)
115 1zko_A Glycine cleavage system 98.9 8.3E-10 2.8E-14 111.7 4.1 68 1359-1426 38-113 (136)
116 3dva_I Dihydrolipoyllysine-res 98.8 7.1E-10 2.4E-14 133.6 0.0 67 1360-1426 10-77 (428)
117 1zy8_K Pyruvate dehydrogenase 98.7 1.5E-09 5.2E-14 119.8 0.0 62 1365-1426 17-79 (229)
118 2k32_A A; NMR {Campylobacter j 98.7 1.4E-08 4.9E-13 100.6 5.7 68 1359-1426 3-100 (116)
119 1hpc_A H protein of the glycin 98.4 7.8E-08 2.7E-12 96.9 2.2 68 1359-1426 29-104 (131)
120 3a7l_A H-protein, glycine clea 98.2 4.5E-07 1.5E-11 91.0 3.9 68 1359-1426 30-105 (128)
121 1onl_A Glycine cleavage system 98.2 3.8E-07 1.3E-11 91.6 2.2 68 1359-1426 29-104 (128)
122 2ekc_A AQ_1548, tryptophan syn 98.0 1.6E-05 5.5E-10 89.9 11.5 188 678-895 28-233 (262)
123 3ne5_B Cation efflux system pr 97.8 1.5E-05 5.3E-10 96.0 6.0 71 1356-1426 120-239 (413)
124 3lnn_A Membrane fusion protein 97.8 2.8E-05 9.4E-10 91.8 7.5 75 1352-1426 52-203 (359)
125 2f1m_A Acriflavine resistance 97.6 1.5E-05 5.2E-10 90.6 2.0 69 1357-1425 22-163 (277)
126 3klr_A Glycine cleavage system 97.6 6.1E-05 2.1E-09 74.9 5.9 52 1363-1414 29-81 (125)
127 3fpp_A Macrolide-specific effl 97.6 4.7E-05 1.6E-09 89.2 5.5 70 1356-1425 30-187 (341)
128 3nav_A Tryptophan synthase alp 97.5 0.00058 2E-08 77.2 13.5 182 679-893 32-234 (271)
129 3tig_A TTL protein; ATP-grAsp, 97.4 0.00088 3E-08 78.9 14.0 154 207-375 146-360 (380)
130 3vnd_A TSA, tryptophan synthas 97.4 0.00057 1.9E-08 77.2 11.3 183 678-893 29-232 (267)
131 1qop_A Tryptophan synthase alp 97.4 0.00067 2.3E-08 76.9 11.7 189 677-895 27-233 (268)
132 3f4w_A Putative hexulose 6 pho 97.4 0.0008 2.8E-08 73.1 11.7 175 678-896 10-187 (211)
133 1ax3_A Iiaglc, glucose permeas 97.3 0.00014 4.7E-09 75.7 4.7 70 1353-1426 8-116 (162)
134 1vf7_A Multidrug resistance pr 97.3 6.9E-05 2.3E-09 89.0 2.5 70 1356-1425 42-170 (369)
135 3mxu_A Glycine cleavage system 97.3 0.00024 8.3E-09 71.9 5.8 52 1363-1414 51-103 (143)
136 3tzu_A GCVH, glycine cleavage 97.2 0.0002 6.9E-09 72.2 4.7 48 1363-1410 46-94 (137)
137 2gpr_A Glucose-permease IIA co 97.2 0.00022 7.5E-09 73.7 5.0 66 1357-1426 7-111 (154)
138 1f3z_A EIIA-GLC, glucose-speci 97.1 0.00033 1.1E-08 72.8 5.1 65 1358-1426 13-116 (161)
139 3t7v_A Methylornithine synthas 97.0 0.029 1E-06 65.7 20.7 215 676-923 89-338 (350)
140 4dk0_A Putative MACA; alpha-ha 96.9 5.4E-05 1.8E-09 89.6 -3.3 66 1356-1421 31-181 (369)
141 3cdx_A Succinylglutamatedesucc 96.9 0.0018 6.1E-08 76.3 9.5 67 1357-1426 267-337 (354)
142 2ztj_A Homocitrate synthase; ( 96.8 0.0051 1.7E-07 73.2 12.7 267 749-1055 21-338 (382)
143 3hgb_A Glycine cleavage system 96.6 0.0022 7.4E-08 65.7 5.8 47 1364-1410 57-104 (155)
144 3na6_A Succinylglutamate desuc 96.5 0.0055 1.9E-07 71.5 9.9 69 1355-1426 255-327 (331)
145 2dn8_A Acetyl-COA carboxylase 96.4 0.0013 4.4E-08 63.1 2.7 45 1382-1426 5-49 (100)
146 1z6h_A Biotin/lipoyl attachmen 96.4 0.007 2.4E-07 53.9 7.3 68 1289-1390 2-69 (72)
147 3mwd_A ATP-citrate synthase; A 96.4 0.0041 1.4E-07 74.6 7.3 109 172-280 8-134 (425)
148 1rd5_A Tryptophan synthase alp 96.1 0.032 1.1E-06 62.7 12.7 182 678-896 29-230 (262)
149 3fmc_A Putative succinylglutam 96.1 0.01 3.6E-07 70.1 8.8 65 1358-1425 291-361 (368)
150 3o1n_A 3-dehydroquinate dehydr 96.0 0.69 2.4E-05 52.3 23.0 236 656-918 25-272 (276)
151 1bdo_A Acetyl-COA carboxylase; 95.9 0.015 5.3E-07 53.0 7.1 32 1358-1389 49-80 (80)
152 3iix_A Biotin synthetase, puta 95.8 0.41 1.4E-05 55.7 20.5 216 676-926 82-337 (348)
153 2d5d_A Methylmalonyl-COA decar 95.7 0.028 9.6E-07 50.1 7.8 69 1287-1389 6-74 (74)
154 3pff_A ATP-citrate synthase; p 95.6 0.0097 3.3E-07 76.6 6.3 110 172-281 8-135 (829)
155 1dcz_A Transcarboxylase 1.3S s 95.6 0.027 9.3E-07 50.8 7.6 71 1285-1389 7-77 (77)
156 2l5t_A Lipoamide acyltransfera 95.3 0.02 6.8E-07 51.8 5.5 33 1357-1389 44-76 (77)
157 1ghj_A E2, E2, the dihydrolipo 95.3 0.025 8.6E-07 51.4 6.2 34 1357-1390 44-77 (79)
158 1tx2_A DHPS, dihydropteroate s 95.3 0.37 1.3E-05 55.0 17.1 184 798-993 41-244 (297)
159 1aj0_A DHPS, dihydropteroate s 95.0 0.35 1.2E-05 54.9 15.7 184 798-993 16-225 (282)
160 4h3d_A 3-dehydroquinate dehydr 94.9 3.2 0.00011 46.3 23.3 235 657-918 6-252 (258)
161 1qjo_A Dihydrolipoamide acetyl 94.9 0.027 9.4E-07 51.2 5.2 34 1357-1390 43-76 (80)
162 2jku_A Propionyl-COA carboxyla 94.8 0.013 4.3E-07 55.6 2.9 71 1285-1389 24-94 (94)
163 2kcc_A Acetyl-COA carboxylase 94.8 0.013 4.4E-07 54.3 2.8 32 1395-1426 6-37 (84)
164 3tha_A Tryptophan synthase alp 94.8 0.052 1.8E-06 60.5 8.2 179 679-893 26-224 (252)
165 1r30_A Biotin synthase; SAM ra 94.7 2.6 8.9E-05 49.4 23.0 211 677-923 98-335 (369)
166 1k8m_A E2 component of branche 94.6 0.051 1.8E-06 51.2 6.5 34 1357-1390 47-80 (93)
167 3crk_C Dihydrolipoyllysine-res 94.6 0.056 1.9E-06 50.2 6.6 34 1357-1390 48-82 (87)
168 2wqp_A Polysialic acid capsule 94.5 0.21 7.2E-06 58.2 12.7 183 679-896 33-236 (349)
169 2yr1_A 3-dehydroquinate dehydr 94.5 4.3 0.00015 45.3 23.0 235 656-918 5-251 (257)
170 3ajx_A 3-hexulose-6-phosphate 94.4 0.75 2.6E-05 49.3 16.2 171 678-895 10-185 (207)
171 1geq_A Tryptophan synthase alp 94.2 0.93 3.2E-05 50.1 16.8 184 678-896 16-220 (248)
172 2k7v_A Dihydrolipoyllysine-res 94.2 0.023 7.7E-07 52.6 3.0 35 1357-1391 39-73 (85)
173 2vp8_A Dihydropteroate synthas 94.1 1.4 4.6E-05 50.8 18.0 189 798-997 43-261 (318)
174 2dqw_A Dihydropteroate synthas 93.9 0.85 2.9E-05 51.9 15.6 206 659-896 35-270 (294)
175 4e38_A Keto-hydroxyglutarate-a 93.7 0.17 5.9E-06 55.7 9.3 156 678-892 43-198 (232)
176 3ic5_A Putative saccharopine d 93.6 0.23 8E-06 47.4 9.2 96 56-162 4-100 (118)
177 1sfl_A 3-dehydroquinate dehydr 93.6 3.5 0.00012 45.5 19.6 213 680-917 16-236 (238)
178 2dnc_A Pyruvate dehydrogenase 93.5 0.088 3E-06 50.1 5.7 36 1357-1392 50-86 (98)
179 3g8r_A Probable spore coat pol 93.5 0.32 1.1E-05 56.6 11.5 147 718-896 75-225 (350)
180 1y8o_B Dihydrolipoyllysine-res 93.5 0.1 3.6E-06 52.1 6.4 36 1357-1392 70-106 (128)
181 2qj8_A MLR6093 protein; struct 93.5 0.15 5E-06 59.4 8.8 64 1359-1425 259-326 (332)
182 1eye_A DHPS 1, dihydropteroate 93.4 5 0.00017 45.3 20.9 183 798-996 7-220 (280)
183 2dne_A Dihydrolipoyllysine-res 93.2 0.095 3.3E-06 50.9 5.6 35 1357-1391 50-85 (108)
184 1eye_A DHPS 1, dihydropteroate 93.1 2.9 9.9E-05 47.3 18.3 204 661-896 14-255 (280)
185 3igs_A N-acetylmannosamine-6-p 92.9 0.94 3.2E-05 49.9 13.6 171 678-896 33-210 (232)
186 1vli_A Spore coat polysacchari 92.9 0.77 2.6E-05 54.0 13.5 186 679-897 42-249 (385)
187 3i6i_A Putative leucoanthocyan 92.8 0.54 1.9E-05 54.3 12.3 97 57-159 10-115 (346)
188 1pmr_A Dihydrolipoyl succinylt 92.7 0.029 1E-06 51.2 1.0 34 1357-1390 45-78 (80)
189 1iyu_A E2P, dihydrolipoamide a 92.7 0.087 3E-06 47.8 4.2 34 1357-1390 41-74 (79)
190 1wa3_A 2-keto-3-deoxy-6-phosph 92.5 2.9 0.0001 44.6 16.7 159 678-896 19-178 (205)
191 3fwz_A Inner membrane protein 92.5 0.18 6.3E-06 50.7 6.7 117 54-185 4-120 (140)
192 2ejm_A Methylcrotonoyl-COA car 92.4 0.074 2.5E-06 50.7 3.4 35 1392-1426 12-46 (99)
193 1gjx_A Pyruvate dehydrogenase; 92.3 0.051 1.7E-06 49.6 2.1 34 1357-1390 44-77 (81)
194 2vef_A Dihydropteroate synthas 92.2 1.4 4.9E-05 50.6 14.5 106 798-916 11-128 (314)
195 1y0e_A Putative N-acetylmannos 92.1 5.5 0.00019 42.9 18.6 187 660-896 7-204 (223)
196 2gpr_A Glucose-permease IIA co 92.1 0.063 2.2E-06 55.4 2.7 55 1371-1426 93-154 (154)
197 3llv_A Exopolyphosphatase-rela 92.1 0.15 5.2E-06 51.0 5.5 91 56-155 5-95 (141)
198 2yci_X 5-methyltetrahydrofolat 91.9 4.7 0.00016 45.4 18.1 193 661-893 16-235 (271)
199 3q58_A N-acetylmannosamine-6-p 91.9 1.1 3.9E-05 49.1 12.6 171 678-896 33-210 (229)
200 3fpp_A Macrolide-specific effl 91.8 0.13 4.4E-06 59.8 5.3 58 1368-1426 6-63 (341)
201 3oa3_A Aldolase; structural ge 91.8 12 0.00042 42.2 21.0 182 678-896 71-263 (288)
202 1ax3_A Iiaglc, glucose permeas 91.7 0.095 3.2E-06 54.5 3.5 55 1372-1426 99-161 (162)
203 4fo4_A Inosine 5'-monophosphat 91.6 2.3 7.9E-05 50.0 15.6 113 759-895 64-176 (366)
204 3rmj_A 2-isopropylmalate synth 91.3 1.1 3.9E-05 52.7 12.7 164 611-792 9-198 (370)
205 3tr9_A Dihydropteroate synthas 91.1 6.1 0.00021 45.3 17.9 184 798-995 29-244 (314)
206 2g1u_A Hypothetical protein TM 91.1 0.89 3.1E-05 46.3 10.2 41 52-92 14-54 (155)
207 1f3z_A EIIA-GLC, glucose-speci 90.9 0.18 6.1E-06 52.4 4.6 68 1358-1426 50-160 (161)
208 3r12_A Deoxyribose-phosphate a 90.9 3.9 0.00013 45.6 15.6 174 678-896 56-245 (260)
209 3lab_A Putative KDPG (2-keto-3 90.8 1.1 3.9E-05 48.6 10.9 159 678-892 22-183 (217)
210 3ovp_A Ribulose-phosphate 3-ep 90.8 0.64 2.2E-05 51.1 9.2 139 721-894 52-195 (228)
211 1h1y_A D-ribulose-5-phosphate 90.7 2.3 7.8E-05 46.5 13.7 173 681-895 19-200 (228)
212 1ur4_A Galactanase; hydrolase, 90.6 11 0.00039 44.6 20.5 140 758-900 53-236 (399)
213 3jr2_A Hexulose-6-phosphate sy 90.5 1.1 3.8E-05 48.7 10.8 172 678-895 16-193 (218)
214 3tr9_A Dihydropteroate synthas 90.5 4.8 0.00016 46.1 16.3 190 678-896 46-274 (314)
215 3our_B EIIA, phosphotransferas 90.4 0.33 1.1E-05 51.1 6.1 20 1407-1426 119-138 (183)
216 2vp8_A Dihydropteroate synthas 90.2 4 0.00014 46.9 15.4 204 659-896 48-289 (318)
217 1ujp_A Tryptophan synthase alp 90.2 1.6 5.3E-05 49.3 11.9 179 680-894 29-227 (271)
218 1h5y_A HISF; histidine biosynt 90.1 4 0.00014 44.5 15.1 210 681-923 33-251 (253)
219 1to3_A Putative aldolase YIHT; 90.0 5.2 0.00018 45.8 16.3 130 757-895 112-253 (304)
220 1jub_A Dihydroorotate dehydrog 89.9 7.4 0.00025 44.4 17.6 130 755-900 108-275 (311)
221 2r6j_A Eugenol synthase 1; phe 89.8 1 3.4E-05 51.3 10.3 93 55-157 9-109 (318)
222 3ff4_A Uncharacterized protein 89.8 1.3 4.6E-05 43.7 9.7 101 57-166 4-116 (122)
223 3qja_A IGPS, indole-3-glycerol 89.7 3.2 0.00011 46.7 14.1 185 682-919 73-261 (272)
224 2h9a_B CO dehydrogenase/acetyl 89.6 3.6 0.00012 47.2 14.5 201 659-894 51-291 (310)
225 1rd5_A Tryptophan synthase alp 89.6 2.2 7.4E-05 47.6 12.6 94 817-922 29-145 (262)
226 3nkl_A UDP-D-quinovosamine 4-d 89.6 1.4 5E-05 43.8 10.1 95 57-164 4-102 (141)
227 1hdo_A Biliverdin IX beta redu 89.5 3 0.0001 43.6 13.1 89 58-156 4-103 (206)
228 2hmt_A YUAA protein; RCK, KTN, 89.5 0.71 2.4E-05 45.6 7.7 90 57-155 6-96 (144)
229 3r6d_A NAD-dependent epimerase 89.5 1.7 5.9E-05 46.5 11.3 94 55-156 3-100 (221)
230 1vhc_A Putative KHG/KDPG aldol 89.5 2.2 7.6E-05 46.6 12.1 158 678-894 26-184 (224)
231 2duw_A Putative COA-binding pr 89.4 1.9 6.6E-05 43.7 10.9 101 57-166 13-128 (145)
232 3ngf_A AP endonuclease, family 89.4 4.7 0.00016 44.6 15.1 198 682-925 24-244 (269)
233 2isw_A Putative fructose-1,6-b 89.2 2.4 8.1E-05 48.7 12.5 191 680-896 28-255 (323)
234 2e6f_A Dihydroorotate dehydrog 89.1 5.6 0.00019 45.5 15.8 129 755-900 108-277 (314)
235 3our_B EIIA, phosphotransferas 89.0 0.45 1.5E-05 50.0 5.8 56 1369-1425 118-181 (183)
236 1rpx_A Protein (ribulose-phosp 88.8 1.5 5E-05 47.9 10.2 190 681-918 23-225 (230)
237 3txv_A Probable tagatose 6-pho 88.6 5.2 0.00018 47.7 15.2 40 857-896 249-289 (450)
238 3lnn_A Membrane fusion protein 88.5 0.29 1E-05 57.2 4.6 59 1368-1426 30-89 (359)
239 3oa3_A Aldolase; structural ge 88.5 3.6 0.00012 46.5 13.1 147 752-917 73-226 (288)
240 3k13_A 5-methyltetrahydrofolat 88.4 7.4 0.00025 44.4 15.9 201 661-893 18-251 (300)
241 3vnd_A TSA, tryptophan synthas 88.3 8.1 0.00028 43.3 16.0 144 755-919 34-204 (267)
242 2ekc_A AQ_1548, tryptophan syn 88.3 12 0.0004 41.8 17.3 142 754-918 32-203 (262)
243 3ngj_A Deoxyribose-phosphate a 88.2 7.9 0.00027 42.6 15.3 178 678-896 40-229 (239)
244 2y5s_A DHPS, dihydropteroate s 88.2 4.4 0.00015 46.1 13.7 188 798-996 24-242 (294)
245 1mxs_A KDPG aldolase; 2-keto-3 88.1 3.2 0.00011 45.4 12.2 154 679-894 36-193 (225)
246 1f6y_A 5-methyltetrahydrofolat 88.1 10 0.00036 42.3 16.7 195 660-892 9-225 (262)
247 1w8s_A FBP aldolase, fructose- 88.1 7.2 0.00025 43.6 15.4 200 679-917 39-248 (263)
248 3r2g_A Inosine 5'-monophosphat 88.0 1.8 6.3E-05 50.6 10.8 71 820-897 99-170 (361)
249 2xha_A NUSG, transcription ant 88.0 0.38 1.3E-05 51.0 4.5 48 1370-1423 22-98 (193)
250 4hb7_A Dihydropteroate synthas 88.0 3.9 0.00013 45.8 12.8 188 798-995 8-212 (270)
251 1tv8_A MOAA, molybdenum cofact 87.8 9.1 0.00031 44.0 16.7 130 676-835 48-190 (340)
252 2d59_A Hypothetical protein PH 87.8 2.9 0.0001 42.3 10.9 101 57-166 22-135 (144)
253 2yw3_A 4-hydroxy-2-oxoglutarat 87.7 1.5 5.3E-05 47.3 9.3 155 680-895 24-178 (207)
254 3qvo_A NMRA family protein; st 87.7 2.1 7.2E-05 46.5 10.6 75 55-139 21-97 (236)
255 1z41_A YQJM, probable NADH-dep 87.7 8.3 0.00029 44.7 16.2 135 755-900 143-311 (338)
256 2y5s_A DHPS, dihydropteroate s 87.7 5.1 0.00018 45.6 13.9 205 659-896 29-272 (294)
257 3k13_A 5-methyltetrahydrofolat 87.6 2.7 9.3E-05 47.9 11.6 126 817-952 34-177 (300)
258 3r12_A Deoxyribose-phosphate a 87.2 5.3 0.00018 44.5 13.3 150 752-920 58-214 (260)
259 3inp_A D-ribulose-phosphate 3- 87.2 0.4 1.4E-05 53.3 4.3 158 721-917 75-240 (246)
260 3q58_A N-acetylmannosamine-6-p 87.0 5.8 0.0002 43.5 13.5 126 751-900 34-160 (229)
261 1y0e_A Putative N-acetylmannos 86.9 5.1 0.00017 43.2 13.0 126 753-901 23-151 (223)
262 3qxb_A Putative xylose isomera 86.8 6.1 0.00021 44.9 14.3 198 682-922 36-279 (316)
263 1tqj_A Ribulose-phosphate 3-ep 86.8 1.1 3.6E-05 49.4 7.4 192 680-918 16-219 (230)
264 2dqw_A Dihydropteroate synthas 86.7 2.3 8E-05 48.3 10.3 104 798-916 30-145 (294)
265 2qjg_A Putative aldolase MJ040 86.7 15 0.00051 40.9 17.1 122 758-895 104-236 (273)
266 1wbh_A KHG/KDPG aldolase; lyas 86.4 5.3 0.00018 43.3 12.7 156 679-893 26-182 (214)
267 1y81_A Conserved hypothetical 86.4 3.5 0.00012 41.5 10.5 101 57-166 14-127 (138)
268 1rvg_A Fructose-1,6-bisphospha 86.4 7.6 0.00026 44.3 14.2 133 757-896 86-253 (305)
269 1fob_A Beta-1,4-galactanase; B 86.3 27 0.00093 40.3 19.5 142 756-900 30-217 (334)
270 1vf7_A Multidrug resistance pr 86.3 0.37 1.3E-05 56.7 3.8 58 1368-1426 18-75 (369)
271 3nav_A Tryptophan synthase alp 86.2 5.2 0.00018 45.0 12.8 99 818-922 32-152 (271)
272 1aj0_A DHPS, dihydropteroate s 86.2 7.7 0.00026 43.9 14.2 205 659-896 21-257 (282)
273 1ub3_A Aldolase protein; schif 86.1 16 0.00054 39.7 16.2 179 678-896 16-205 (220)
274 1lt8_A Betaine-homocysteine me 85.9 24 0.00081 42.0 18.9 99 760-871 146-248 (406)
275 2w6r_A Imidazole glycerol phos 85.8 3.4 0.00012 45.9 11.1 202 681-921 30-251 (266)
276 1yxy_A Putative N-acetylmannos 85.7 6.1 0.00021 43.0 13.0 168 682-896 37-215 (234)
277 2xha_A NUSG, transcription ant 85.7 0.32 1.1E-05 51.6 2.4 45 1373-1423 85-157 (193)
278 3l9w_A Glutathione-regulated p 85.5 0.37 1.3E-05 57.7 3.2 115 58-187 5-119 (413)
279 3dhn_A NAD-dependent epimerase 85.3 4.9 0.00017 42.9 11.8 73 57-140 4-77 (227)
280 3q94_A Fructose-bisphosphate a 85.2 6.1 0.00021 44.7 12.7 131 756-897 93-237 (288)
281 1iuk_A Hypothetical protein TT 85.2 2.4 8.3E-05 42.8 8.6 101 57-166 13-128 (140)
282 3inp_A D-ribulose-phosphate 3- 85.2 1.1 3.8E-05 49.7 6.6 103 817-927 37-141 (246)
283 1gvf_A Tagatose-bisphosphate a 85.1 6.7 0.00023 44.4 13.0 130 756-896 87-232 (286)
284 3p6l_A Sugar phosphate isomera 85.0 13 0.00043 40.8 15.3 101 755-874 24-138 (262)
285 1hjs_A Beta-1,4-galactanase; 4 85.0 22 0.00077 40.9 17.9 141 758-901 32-217 (332)
286 3igs_A N-acetylmannosamine-6-p 84.9 6.7 0.00023 43.0 12.7 126 751-900 34-160 (232)
287 1qop_A Tryptophan synthase alp 84.9 15 0.0005 41.1 15.8 147 755-919 33-203 (268)
288 3usb_A Inosine-5'-monophosphat 84.9 3.7 0.00013 50.4 11.8 68 822-895 257-324 (511)
289 3ndo_A Deoxyribose-phosphate a 84.6 15 0.00052 40.2 15.2 179 678-896 26-219 (231)
290 3kws_A Putative sugar isomeras 84.6 36 0.0012 37.6 19.1 201 658-923 27-257 (287)
291 3d4r_A Domain of unknown funct 84.5 0.94 3.2E-05 46.5 5.0 51 1363-1413 106-157 (169)
292 2v82_A 2-dehydro-3-deoxy-6-pho 84.2 13 0.00044 39.7 14.5 160 678-896 16-176 (212)
293 3lye_A Oxaloacetate acetyl hyd 84.0 8.2 0.00028 44.1 13.2 176 722-921 77-270 (307)
294 3m2p_A UDP-N-acetylglucosamine 84.0 6.1 0.00021 44.5 12.4 93 56-162 1-108 (311)
295 3ne5_B Cation efflux system pr 84.0 0.71 2.4E-05 55.3 4.7 59 1368-1426 94-154 (413)
296 3hgj_A Chromate reductase; TIM 83.9 16 0.00055 42.4 16.2 129 760-896 159-318 (349)
297 1qyc_A Phenylcoumaran benzylic 83.7 3.2 0.00011 46.6 9.8 93 57-157 4-107 (308)
298 3dva_I Dihydrolipoyllysine-res 83.7 0.22 7.4E-06 60.0 0.0 36 1357-1392 45-80 (428)
299 1xm3_A Thiazole biosynthesis p 83.6 1.8 6.3E-05 48.5 7.6 165 687-896 29-207 (264)
300 3ctl_A D-allulose-6-phosphate 83.6 1.9 6.5E-05 47.4 7.5 139 721-895 47-194 (231)
301 3lmz_A Putative sugar isomeras 83.6 8.5 0.00029 42.2 13.0 194 683-923 32-226 (257)
302 3ewb_X 2-isopropylmalate synth 83.5 5.2 0.00018 45.5 11.4 160 613-792 4-191 (293)
303 1qyd_A Pinoresinol-lariciresin 83.4 4 0.00014 45.9 10.6 93 57-157 4-110 (313)
304 1id1_A Putative potassium chan 83.3 2.5 8.5E-05 42.8 7.9 90 57-154 3-95 (153)
305 4avf_A Inosine-5'-monophosphat 83.3 4.4 0.00015 49.5 11.4 68 822-895 230-297 (490)
306 4dk0_A Putative MACA; alpha-ha 83.3 0.2 6.9E-06 58.8 -0.5 55 1371-1426 10-64 (369)
307 3l21_A DHDPS, dihydrodipicolin 83.1 10 0.00035 43.2 13.8 100 815-918 31-135 (304)
308 2h9a_B CO dehydrogenase/acetyl 83.0 6.5 0.00022 45.1 11.9 162 820-996 74-262 (310)
309 1eep_A Inosine 5'-monophosphat 82.9 5.8 0.0002 47.1 12.1 68 822-896 154-222 (404)
310 3vni_A Xylose isomerase domain 82.9 25 0.00085 39.0 16.8 198 683-927 19-244 (294)
311 2nx9_A Oxaloacetate decarboxyl 82.9 15 0.00052 44.4 15.7 150 755-918 32-198 (464)
312 1wv2_A Thiazole moeity, thiazo 82.8 4 0.00014 45.3 9.6 132 759-916 93-236 (265)
313 3l4b_C TRKA K+ channel protien 82.7 1.6 5.5E-05 47.0 6.5 87 59-153 2-88 (218)
314 1vyr_A Pentaerythritol tetrani 82.6 10 0.00034 44.5 13.7 139 753-900 158-327 (364)
315 3sc6_A DTDP-4-dehydrorhamnose 82.6 2.8 9.4E-05 46.7 8.6 61 57-140 4-66 (287)
316 4eiv_A Deoxyribose-phosphate a 82.5 24 0.00082 39.8 15.8 148 752-917 41-204 (297)
317 2c6q_A GMP reductase 2; TIM ba 82.5 5.4 0.00019 46.6 11.3 69 824-898 121-191 (351)
318 2gas_A Isoflavone reductase; N 82.5 3.1 0.00011 46.7 9.1 91 57-157 2-106 (307)
319 3dz1_A Dihydrodipicolinate syn 82.5 12 0.00041 42.9 14.0 98 815-917 24-125 (313)
320 1n7k_A Deoxyribose-phosphate a 82.4 16 0.00054 40.2 14.2 177 678-896 33-221 (234)
321 1k77_A EC1530, hypothetical pr 82.3 59 0.002 35.1 19.3 197 678-922 12-234 (260)
322 3b0p_A TRNA-dihydrouridine syn 82.3 17 0.00059 42.2 15.5 130 755-897 72-226 (350)
323 3fa4_A 2,3-dimethylmalate lyas 82.3 9.5 0.00033 43.5 12.8 209 687-921 31-262 (302)
324 3n9r_A Fructose-bisphosphate a 82.3 8.5 0.00029 43.9 12.3 132 757-897 88-256 (307)
325 4egb_A DTDP-glucose 4,6-dehydr 82.2 8.4 0.00029 44.0 12.8 77 57-139 24-107 (346)
326 1vcv_A Probable deoxyribose-ph 82.2 42 0.0014 36.6 17.4 181 677-896 13-220 (226)
327 2qul_A D-tagatose 3-epimerase; 82.2 11 0.00038 41.8 13.4 116 755-874 19-156 (290)
328 2ocz_A 3-dehydroquinate dehydr 82.1 15 0.00051 40.2 14.0 197 695-922 27-228 (231)
329 1f6y_A 5-methyltetrahydrofolat 82.0 3.5 0.00012 46.2 9.0 92 817-920 22-116 (262)
330 4djd_D C/Fe-SP, corrinoid/iron 81.9 4.5 0.00015 46.6 10.0 140 822-973 82-236 (323)
331 2eja_A URO-D, UPD, uroporphyri 81.9 3.5 0.00012 47.7 9.4 82 821-916 180-271 (338)
332 2r14_A Morphinone reductase; H 81.8 7.7 0.00026 45.7 12.3 139 753-900 163-332 (377)
333 2gou_A Oxidoreductase, FMN-bin 81.8 7.7 0.00026 45.5 12.3 138 753-900 158-326 (365)
334 2k32_A A; NMR {Campylobacter j 81.8 0.49 1.7E-05 46.1 1.7 36 1357-1392 67-103 (116)
335 3ovp_A Ribulose-phosphate 3-ep 81.7 1.6 5.4E-05 48.0 6.0 103 817-927 14-119 (228)
336 3iwp_A Copper homeostasis prot 81.7 14 0.00046 41.8 13.5 171 695-899 58-241 (287)
337 3nvt_A 3-deoxy-D-arabino-heptu 81.5 14 0.00046 43.7 14.2 182 679-895 154-347 (385)
338 2xhc_A Transcription antitermi 81.5 1.1 3.8E-05 52.2 4.9 48 1370-1423 62-138 (352)
339 3gr7_A NADPH dehydrogenase; fl 81.5 18 0.00062 41.9 15.2 132 755-896 143-307 (340)
340 1mzh_A Deoxyribose-phosphate a 81.5 30 0.001 37.5 16.1 182 678-896 17-204 (225)
341 3zwt_A Dihydroorotate dehydrog 81.4 31 0.001 40.4 17.2 130 754-899 162-330 (367)
342 3m47_A Orotidine 5'-phosphate 81.3 5.9 0.0002 43.4 10.4 122 752-895 77-201 (228)
343 1p9l_A Dihydrodipicolinate red 81.2 7.6 0.00026 43.0 11.3 92 59-157 2-98 (245)
344 3f4w_A Putative hexulose 6 pho 81.1 16 0.00056 38.8 13.8 109 765-896 24-134 (211)
345 2wm3_A NMRA-like family domain 81.0 3.1 0.00011 46.7 8.4 72 57-139 5-81 (299)
346 3gnh_A L-lysine, L-arginine ca 81.0 9.5 0.00032 44.4 12.9 71 817-894 164-245 (403)
347 2y7e_A 3-keto-5-aminohexanoate 80.8 5.9 0.0002 44.8 10.3 133 799-931 10-157 (282)
348 3sz8_A 2-dehydro-3-deoxyphosph 80.7 5.6 0.00019 44.9 10.1 121 759-897 104-244 (285)
349 4id9_A Short-chain dehydrogena 80.7 5.1 0.00017 45.8 10.2 69 55-139 17-86 (347)
350 3o9z_A Lipopolysaccaride biosy 80.6 8.3 0.00028 44.0 11.9 92 57-159 3-100 (312)
351 1r3s_A URO-D, uroporphyrinogen 80.6 2.7 9.3E-05 49.3 7.9 84 821-916 198-295 (367)
352 2vef_A Dihydropteroate synthas 80.5 24 0.00081 40.5 15.4 207 659-896 16-284 (314)
353 1qwg_A PSL synthase;, (2R)-pho 80.5 24 0.00084 38.9 14.7 157 750-919 23-197 (251)
354 3tak_A DHDPS, dihydrodipicolin 80.5 13 0.00045 42.1 13.3 99 815-917 17-120 (291)
355 2qul_A D-tagatose 3-epimerase; 80.4 57 0.002 35.8 18.6 135 753-923 88-241 (290)
356 2c5a_A GDP-mannose-3', 5'-epim 80.4 16 0.00056 42.4 14.6 74 56-139 28-102 (379)
357 3c1o_A Eugenol synthase; pheny 80.4 9.4 0.00032 43.1 12.2 94 56-157 3-107 (321)
358 2a4a_A Deoxyribose-phosphate a 80.3 13 0.00044 41.9 12.8 151 752-917 47-210 (281)
359 2q1w_A Putative nucleotide sug 80.3 12 0.00041 42.6 13.2 79 56-140 20-99 (333)
360 4fo4_A Inosine 5'-monophosphat 80.2 29 0.00099 40.6 16.3 115 755-895 109-239 (366)
361 3vav_A 3-methyl-2-oxobutanoate 80.0 23 0.0008 39.7 14.7 158 685-866 40-210 (275)
362 2cw6_A Hydroxymethylglutaryl-C 79.9 2.9 9.9E-05 47.7 7.6 43 750-792 153-197 (298)
363 1vrd_A Inosine-5'-monophosphat 79.8 5.2 0.00018 48.9 10.4 70 822-897 238-307 (494)
364 3khj_A Inosine-5-monophosphate 79.8 32 0.0011 40.2 16.6 110 760-896 64-173 (361)
365 3flu_A DHDPS, dihydrodipicolin 79.8 16 0.00055 41.5 13.7 99 815-917 23-126 (297)
366 3noy_A 4-hydroxy-3-methylbut-2 79.7 4.7 0.00016 46.6 9.0 94 816-922 42-135 (366)
367 1ep3_A Dihydroorotate dehydrog 79.7 3.8 0.00013 46.7 8.5 78 818-897 109-197 (311)
368 1zlp_A PSR132, petal death pro 79.6 7.5 0.00026 44.6 10.8 225 687-936 52-300 (318)
369 3hgj_A Chromate reductase; TIM 79.6 57 0.0019 37.8 18.6 82 819-900 151-263 (349)
370 3vni_A Xylose isomerase domain 79.5 11 0.00038 41.9 12.3 117 755-874 19-155 (294)
371 3m5v_A DHDPS, dihydrodipicolin 79.5 13 0.00046 42.2 13.0 99 815-917 23-127 (301)
372 2yci_X 5-methyltetrahydrofolat 79.5 6 0.00021 44.5 9.8 74 817-896 31-107 (271)
373 4dpp_A DHDPS 2, dihydrodipicol 79.5 15 0.0005 43.0 13.4 141 765-919 35-180 (360)
374 3daq_A DHDPS, dihydrodipicolin 79.4 14 0.00048 41.9 13.1 98 816-917 19-121 (292)
375 1qwg_A PSL synthase;, (2R)-pho 79.4 3.7 0.00013 45.4 7.8 96 754-856 86-195 (251)
376 2fli_A Ribulose-phosphate 3-ep 79.3 6.5 0.00022 42.2 9.9 178 678-896 13-198 (220)
377 4fxs_A Inosine-5'-monophosphat 79.3 5 0.00017 49.2 9.9 69 823-897 233-301 (496)
378 1tqx_A D-ribulose-5-phosphate 79.1 3.9 0.00013 44.8 8.0 158 721-917 53-218 (227)
379 2y88_A Phosphoribosyl isomeras 78.9 2.4 8.2E-05 46.5 6.4 73 821-897 32-104 (244)
380 1o66_A 3-methyl-2-oxobutanoate 78.9 21 0.00071 40.1 13.8 120 758-894 29-179 (275)
381 1tx2_A DHPS, dihydropteroate s 78.8 24 0.00082 40.1 14.6 199 662-896 49-276 (297)
382 2pgw_A Muconate cycloisomerase 78.8 23 0.00079 41.6 15.2 164 679-883 147-311 (384)
383 3dx5_A Uncharacterized protein 78.6 11 0.00037 41.8 11.8 205 684-919 18-246 (286)
384 4hb7_A Dihydropteroate synthas 78.5 20 0.00069 40.1 13.5 200 660-894 14-242 (270)
385 1nvm_A HOA, 4-hydroxy-2-oxoval 78.4 9.7 0.00033 44.3 11.6 120 815-940 25-161 (345)
386 4ina_A Saccharopine dehydrogen 78.4 4.5 0.00015 48.1 9.0 125 57-190 1-140 (405)
387 3slg_A PBGP3 protein; structur 78.4 6.1 0.00021 45.7 10.0 75 56-139 23-100 (372)
388 1zy8_K Pyruvate dehydrogenase 78.4 0.42 1.5E-05 52.5 0.0 34 1357-1390 46-80 (229)
389 3l23_A Sugar phosphate isomera 78.1 11 0.00039 42.5 11.9 114 755-873 31-168 (303)
390 3ngj_A Deoxyribose-phosphate a 78.0 38 0.0013 37.3 15.3 148 753-918 43-196 (239)
391 3lmz_A Putative sugar isomeras 77.9 22 0.00075 38.8 13.9 100 755-873 32-135 (257)
392 2x7v_A Probable endonuclease 4 77.9 10 0.00034 42.0 11.2 117 755-874 14-148 (287)
393 1yxy_A Putative N-acetylmannos 77.5 17 0.00057 39.5 12.6 126 754-901 37-165 (234)
394 1vzw_A Phosphoribosyl isomeras 77.4 2.5 8.5E-05 46.4 5.9 71 821-897 33-105 (244)
395 1ep3_A Dihydroorotate dehydrog 77.4 19 0.00064 40.8 13.5 122 757-898 115-272 (311)
396 2c20_A UDP-glucose 4-epimerase 77.3 7.2 0.00024 44.2 10.0 75 57-140 1-77 (330)
397 4e38_A Keto-hydroxyglutarate-a 77.3 9.6 0.00033 41.8 10.4 88 782-894 24-111 (232)
398 1q7z_A 5-methyltetrahydrofolat 77.2 34 0.0012 42.5 16.5 194 662-895 322-537 (566)
399 3lab_A Putative KDPG (2-keto-3 77.1 5.1 0.00018 43.5 8.0 68 817-893 22-89 (217)
400 1pv8_A Delta-aminolevulinic ac 77.1 3.9 0.00013 46.4 7.2 107 811-923 50-189 (330)
401 1h5y_A HISF; histidine biosynt 76.9 7.8 0.00027 42.2 9.7 73 821-897 34-107 (253)
402 3glc_A Aldolase LSRF; TIM barr 76.7 25 0.00086 39.9 14.0 162 732-917 105-274 (295)
403 2pzm_A Putative nucleotide sug 76.7 8.3 0.00029 43.9 10.3 77 57-140 20-98 (330)
404 3c85_A Putative glutathione-re 76.7 2.4 8.2E-05 44.2 5.3 36 57-92 39-75 (183)
405 3na8_A Putative dihydrodipicol 76.6 17 0.00058 41.7 12.8 99 815-917 40-143 (315)
406 3ajx_A 3-hexulose-6-phosphate 76.5 47 0.0016 35.0 15.6 168 758-959 18-192 (207)
407 3dfz_A SIRC, precorrin-2 dehyd 76.4 2.5 8.6E-05 46.2 5.4 33 57-89 31-63 (223)
408 1o66_A 3-methyl-2-oxobutanoate 76.3 74 0.0025 35.6 17.3 155 685-866 28-198 (275)
409 3cu2_A Ribulose-5-phosphate 3- 76.3 4.4 0.00015 44.7 7.4 117 756-896 82-217 (237)
410 3eeg_A 2-isopropylmalate synth 76.3 31 0.0011 39.7 14.9 242 750-1047 25-296 (325)
411 1n7h_A GDP-D-mannose-4,6-dehyd 76.2 9.3 0.00032 44.3 10.8 80 55-140 26-116 (381)
412 1p1x_A Deoxyribose-phosphate a 76.2 34 0.0012 38.1 14.6 187 754-955 29-239 (260)
413 1gte_A Dihydropyrimidine dehyd 76.2 28 0.00094 46.5 16.5 151 722-898 624-818 (1025)
414 3l23_A Sugar phosphate isomera 76.1 56 0.0019 36.7 17.0 130 648-794 4-158 (303)
415 1lss_A TRK system potassium up 76.0 4.7 0.00016 39.3 7.0 34 58-91 5-38 (140)
416 3i65_A Dihydroorotate dehydrog 75.9 25 0.00085 41.9 14.1 83 817-902 280-380 (415)
417 3obe_A Sugar phosphate isomera 75.9 9 0.00031 43.4 10.2 116 755-874 38-173 (305)
418 1rqb_A Transcarboxylase 5S sub 75.8 34 0.0012 42.1 15.7 155 750-918 44-215 (539)
419 1thf_D HISF protein; thermophI 75.7 7.6 0.00026 42.6 9.3 74 821-898 31-105 (253)
420 3gr7_A NADPH dehydrogenase; fl 75.5 34 0.0012 39.5 15.1 119 777-899 80-252 (340)
421 3abi_A Putative uncharacterize 75.3 4.9 0.00017 47.0 8.0 116 58-190 17-132 (365)
422 3n6x_A Putative glutathionylsp 75.2 2.5 8.6E-05 51.2 5.5 68 184-260 341-410 (474)
423 1h7n_A 5-aminolaevulinic acid 75.2 7.4 0.00025 44.3 8.8 105 811-921 60-198 (342)
424 1f76_A Dihydroorotate dehydrog 75.1 34 0.0012 39.3 14.9 77 817-896 222-318 (336)
425 2qw5_A Xylose isomerase-like T 75.0 66 0.0023 36.5 17.4 193 680-922 30-275 (335)
426 3ih1_A Methylisocitrate lyase; 75.0 27 0.00094 39.8 13.7 123 759-893 42-192 (305)
427 3s5o_A 4-hydroxy-2-oxoglutarat 74.9 11 0.00037 43.2 10.5 101 815-917 30-135 (307)
428 2qgy_A Enolase from the enviro 74.9 35 0.0012 40.2 15.3 165 679-883 149-315 (391)
429 3khj_A Inosine-5-monophosphate 74.5 39 0.0013 39.5 15.3 115 756-895 107-235 (361)
430 3ius_A Uncharacterized conserv 74.4 5.7 0.00019 44.1 7.9 36 56-91 4-39 (286)
431 3p6l_A Sugar phosphate isomera 74.2 31 0.0011 37.6 13.8 212 658-922 11-229 (262)
432 3fkr_A L-2-keto-3-deoxyarabona 74.1 10 0.00035 43.4 10.1 102 815-917 24-130 (309)
433 3mcm_A 2-amino-4-hydroxy-6-hyd 74.1 10 0.00035 45.5 10.2 91 798-895 192-298 (442)
434 3si9_A DHDPS, dihydrodipicolin 74.0 23 0.00078 40.6 12.9 99 815-917 38-141 (315)
435 2z6i_A Trans-2-enoyl-ACP reduc 73.9 12 0.0004 43.3 10.6 116 755-900 77-195 (332)
436 1n7k_A Deoxyribose-phosphate a 73.9 37 0.0013 37.2 13.9 141 753-914 36-184 (234)
437 1wa3_A 2-keto-3-deoxy-6-phosph 73.8 7.8 0.00027 41.2 8.5 68 817-893 19-87 (205)
438 3dqp_A Oxidoreductase YLBE; al 73.6 12 0.00043 39.6 10.1 71 59-141 2-74 (219)
439 3pdi_B Nitrogenase MOFE cofact 73.6 9.1 0.00031 46.3 9.9 85 57-159 313-397 (458)
440 3e48_A Putative nucleoside-dip 73.6 16 0.00054 40.5 11.3 88 59-156 2-98 (289)
441 3b8i_A PA4872 oxaloacetate dec 73.5 12 0.00041 42.4 10.1 123 759-893 34-185 (287)
442 3dx5_A Uncharacterized protein 73.5 14 0.00049 40.8 11.0 112 755-873 17-145 (286)
443 2r8w_A AGR_C_1641P; APC7498, d 73.3 30 0.001 39.9 13.8 99 815-917 50-153 (332)
444 1vzw_A Phosphoribosyl isomeras 73.3 15 0.00053 40.0 11.0 199 682-916 33-239 (244)
445 3vk5_A MOEO5; TIM barrel, tran 73.3 5.9 0.0002 44.6 7.4 58 810-872 45-104 (286)
446 3e96_A Dihydrodipicolinate syn 73.3 20 0.00067 41.1 12.2 99 815-917 28-130 (316)
447 3u0h_A Xylose isomerase domain 73.2 3.6 0.00012 45.5 5.9 116 755-874 18-145 (281)
448 2wkj_A N-acetylneuraminate lya 73.0 33 0.0011 39.0 14.0 99 815-917 27-130 (303)
449 2r8c_A Putative amidohydrolase 73.0 18 0.00061 42.6 12.2 71 817-894 172-253 (426)
450 3a5f_A Dihydrodipicolinate syn 73.0 14 0.00048 41.8 10.8 98 817-918 19-121 (291)
451 3h5d_A DHDPS, dihydrodipicolin 72.9 20 0.0007 40.9 12.2 100 815-918 23-128 (311)
452 1q7z_A 5-methyltetrahydrofolat 72.9 9.7 0.00033 47.3 10.1 92 817-920 337-431 (566)
453 3qfe_A Putative dihydrodipicol 72.8 11 0.00036 43.5 9.8 101 815-917 27-132 (318)
454 1ub3_A Aldolase protein; schif 72.8 53 0.0018 35.6 14.7 146 753-917 19-171 (220)
455 1ydn_A Hydroxymethylglutaryl-C 72.7 5.1 0.00017 45.5 7.0 75 816-897 22-100 (295)
456 1oy0_A Ketopantoate hydroxymet 72.6 43 0.0015 37.7 14.2 156 685-866 45-216 (281)
457 2jl1_A Triphenylmethane reduct 72.6 4.4 0.00015 44.9 6.4 89 58-156 1-99 (287)
458 3iv3_A Tagatose 1,6-diphosphat 72.5 72 0.0024 36.8 16.4 150 750-911 107-290 (332)
459 3ngf_A AP endonuclease, family 72.4 22 0.00074 39.1 12.0 112 755-873 25-153 (269)
460 3vav_A 3-methyl-2-oxobutanoate 72.4 21 0.0007 40.1 11.6 98 759-873 42-151 (275)
461 2ydy_A Methionine adenosyltran 72.3 7.7 0.00026 43.6 8.5 68 56-139 1-69 (315)
462 3qze_A DHDPS, dihydrodipicolin 72.3 13 0.00044 42.7 10.3 99 815-917 39-142 (314)
463 3kws_A Putative sugar isomeras 72.2 7.9 0.00027 43.1 8.4 116 754-875 39-170 (287)
464 1xi3_A Thiamine phosphate pyro 72.1 22 0.00075 37.7 11.6 157 682-897 27-191 (215)
465 1t2a_A GDP-mannose 4,6 dehydra 72.1 12 0.0004 43.4 10.1 80 55-140 22-112 (375)
466 4af0_A Inosine-5'-monophosphat 72.1 29 0.00098 42.5 13.4 77 821-903 281-357 (556)
467 3bw2_A 2-nitropropane dioxygen 72.0 27 0.00093 40.8 13.3 115 755-898 111-239 (369)
468 3ih1_A Methylisocitrate lyase; 71.9 12 0.00042 42.7 9.8 154 746-921 99-266 (305)
469 3rc1_A Sugar 3-ketoreductase; 71.8 11 0.00037 43.7 9.7 142 57-218 27-178 (350)
470 3ruf_A WBGU; rossmann fold, UD 71.8 17 0.00057 41.5 11.3 76 56-140 24-110 (351)
471 1qtw_A Endonuclease IV; DNA re 71.7 31 0.0011 37.9 13.2 176 683-876 14-222 (285)
472 1gte_A Dihydropyrimidine dehyd 71.6 28 0.00096 46.4 14.8 79 817-896 645-735 (1025)
473 2yxg_A DHDPS, dihydrodipicolin 71.6 33 0.0011 38.7 13.4 98 816-917 17-119 (289)
474 3obe_A Sugar phosphate isomera 71.5 76 0.0026 35.7 16.5 126 657-794 21-164 (305)
475 3enk_A UDP-glucose 4-epimerase 71.4 11 0.00039 42.7 9.7 77 57-139 5-87 (341)
476 1vyr_A Pentaerythritol tetrani 71.4 38 0.0013 39.6 14.3 81 820-900 161-275 (364)
477 3orf_A Dihydropteridine reduct 71.3 10 0.00035 41.5 8.9 71 55-139 20-96 (251)
478 3sxp_A ADP-L-glycero-D-mannohe 71.3 35 0.0012 39.1 14.0 76 56-140 9-100 (362)
479 3ffs_A Inosine-5-monophosphate 71.2 27 0.00093 41.4 13.0 113 757-893 147-272 (400)
480 1z41_A YQJM, probable NADH-dep 71.2 37 0.0013 39.2 14.0 116 779-898 82-251 (338)
481 2bmb_A Folic acid synthesis pr 71.2 29 0.00099 42.6 13.5 108 798-915 226-353 (545)
482 2ehh_A DHDPS, dihydrodipicolin 71.2 32 0.0011 38.9 13.2 98 816-917 17-119 (294)
483 3d0c_A Dihydrodipicolinate syn 71.2 25 0.00087 40.2 12.5 99 815-917 28-130 (314)
484 1q6o_A Humps, 3-keto-L-gulonat 71.2 39 0.0013 36.2 13.3 171 679-896 14-191 (216)
485 1i60_A IOLI protein; beta barr 71.1 11 0.00036 41.5 9.1 115 755-875 16-147 (278)
486 1zfj_A Inosine monophosphate d 71.1 10 0.00035 46.2 9.6 69 822-896 234-302 (491)
487 3qc0_A Sugar isomerase; TIM ba 71.1 56 0.0019 35.5 15.0 186 682-922 19-242 (275)
488 3n9r_A Fructose-bisphosphate a 71.0 11 0.00036 43.1 9.0 102 781-899 4-109 (307)
489 3tva_A Xylose isomerase domain 71.0 32 0.0011 38.1 13.1 111 758-873 26-161 (290)
490 4ef8_A Dihydroorotate dehydrog 71.0 1E+02 0.0035 35.8 17.6 123 764-901 153-311 (354)
491 3l5l_A Xenobiotic reductase A; 70.8 30 0.001 40.4 13.3 134 755-896 157-325 (363)
492 1jcn_A Inosine monophosphate d 70.6 17 0.00059 44.5 11.6 70 822-897 256-325 (514)
493 1mzh_A Deoxyribose-phosphate a 70.5 76 0.0026 34.3 15.5 129 752-897 19-153 (225)
494 2a4a_A Deoxyribose-phosphate a 70.4 31 0.0011 38.8 12.5 196 678-904 45-267 (281)
495 3b4u_A Dihydrodipicolinate syn 70.4 38 0.0013 38.3 13.6 100 815-917 19-123 (294)
496 3eb2_A Putative dihydrodipicol 70.4 17 0.0006 41.2 10.8 99 815-917 20-123 (300)
497 3cpr_A Dihydrodipicolinate syn 70.4 41 0.0014 38.2 13.9 99 815-917 32-135 (304)
498 3iwp_A Copper homeostasis prot 70.4 39 0.0013 38.1 13.2 122 759-896 52-186 (287)
499 4ea9_A Perosamine N-acetyltran 70.4 15 0.00052 39.4 9.9 35 55-89 10-44 (220)
500 2yy7_A L-threonine dehydrogena 70.1 7.9 0.00027 43.4 7.9 73 57-139 2-77 (312)
No 1
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=5.8e-221 Score=2167.03 Aligned_cols=1135 Identities=44% Similarity=0.761 Sum_probs=1053.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 55 KTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
+||+||||+|||++|++++|+|+++|++++++++++|..+.|.++||++|+++.+..+..+|+|++.|+++|+++++|+|
T Consensus 2 ~~~kkVLIagrGeia~riiraa~elGi~vVav~s~~d~~s~~~~~ADe~~~ig~~~~~~~syld~~~Ii~~a~~~~~DaI 81 (1150)
T 3hbl_A 2 KQIKKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSLHRYKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAI 81 (1150)
T ss_dssp -CCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCGGGGTSSEEEECCTTSCTTGGGTCHHHHHHHHHHTTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCcccchhhhhcceeeecCCCCCccccccCHHHHHHHHHHhCCCEE
Confidence 56899999999999999999999999999999999999999999999999998666778899999999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEe
Q psy15244 135 HPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILK 214 (1427)
Q Consensus 135 ~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVK 214 (1427)
||||||++|++.++++|+++|++|+||++++++.++||..+|++|+++|||+|+++...+.+.+++.++++++|||+|||
T Consensus 82 ~pg~gflsE~~~~a~~le~~Gi~~iGp~~eai~~~~DK~~~r~ll~~aGIPvpp~~~~~v~s~eea~~~a~~iGyPvVVK 161 (1150)
T 3hbl_A 82 HPGYGFLSENEQFARRCAEEGIKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLMIK 161 (1150)
T ss_dssp ECTTTTSTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSCBCSSSTTTTTGGGTCSSEEEE
T ss_pred EECCCcccccHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCcCCCCccccCCCCHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999997556889999999999999999999
Q ss_pred ecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccceE
Q psy15244 215 AAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKV 294 (1427)
Q Consensus 215 P~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~ 294 (1427)
|+.|+||+||++|++.+||.++++.+.+++...|+++.+|+|+||++++|++|++++|++|+++++++|+|+++++|++.
T Consensus 162 P~~GgGg~Gv~vv~s~eeL~~a~~~a~~~a~~~fg~~~vlVEeyI~G~reieV~vl~d~~G~vv~l~er~~s~qr~~~k~ 241 (1150)
T 3hbl_A 162 ATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKV 241 (1150)
T ss_dssp CCC-------CEECCSSSCTHHHHSSSSSCC------CBEEECCCSSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEE
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEccCCCcEEEEEEEEeCCCCEEEEEeeccceeccCcee
Confidence 99999999999999999999999988777777788899999999997799999999999999999999999999999999
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcC
Q psy15244 295 IQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQG 374 (1427)
Q Consensus 295 ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G 374 (1427)
++.+|++.++++.+++|.+.+.++++++||+|++|+||+++++ ++||||||||+|++|+++|+++|+|++++++++++|
T Consensus 242 ~e~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~vEflvd~d-~~y~iEINpR~~g~~~vte~~tGvDlv~~~i~ia~G 320 (1150)
T 3hbl_A 242 VEVAPSVGLSPTLRQRICDAAIQLMENIKYVNAGTVEFLVSGD-EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAG 320 (1150)
T ss_dssp EEESSCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETT-EEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTT
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEECC-eEEEEEEeCCCCCCcceeehhcCCCHHHHHHHHHCC
Confidence 9999998899999999999999999999999999999999987 799999999999999999999999999999999999
Q ss_pred CCCcc--ccc-cccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEE
Q psy15244 375 KSLTE--LGL-CQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIV 451 (1427)
Q Consensus 375 ~~l~~--l~l-~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~ 451 (1427)
++|+. +++ .|..+..+||||+||+|+|||.++|.|++|+|+.+++|+++|+|+|+++++.|+.|+++|||++|||++
T Consensus 321 ~~L~~~~~~~~~q~~i~~~G~ai~~Ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~v~~~yds~lakvi~ 400 (1150)
T 3hbl_A 321 ADLFGEEINMPQQKDITTLGYAIQCRITTEDPLNDFMPDTGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLST 400 (1150)
T ss_dssp CCTTSTTTCCCCGGGCCCCSEEEEEEECSEEGGGTSEECCCCCCEEECCCCTTEEEEESSCSSSCCCCTTSCCCSEEEEE
T ss_pred CCCCccccccccccccccceEEEEEEEeccCCccccCCCCceEEEEEcCCCCceeccccccccCCEeCCcCCCceeEEEE
Confidence 99874 344 577889999999999999999999999999999999999999999987789999999999999999999
Q ss_pred EcCCHHHHHHHHHHHhhccEEcccccCHHHHHhhcCCcccccCCccccccccCcchhhhcCCcchhHHHHHHHHHHHhhh
Q psy15244 452 HTATYKSSCEKMRRALEETQVSGVTTNLPFLLNVFDDKKFLSGEALETNFIDDNPQLLERNSYQTCRDMKILRFIGETLV 531 (1427)
Q Consensus 452 ~G~~~~eA~~r~~raL~e~~I~Gv~tni~~l~~~l~~~~f~~g~~~~t~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 531 (1427)
||+|+++|++||.+||++++|+|++|||+||+++|.||+|++| +++|+||++||+||++...+ +|++|||+|+++++|
T Consensus 401 ~g~~~~eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~-~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 478 (1150)
T 3hbl_A 401 HAISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSG-DYTTKFIEETPELFDIQPSL-DRGTKTLEYIGNVTI 478 (1150)
T ss_dssp EESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHHCHHHHHS-CCCTTHHHHCGGGGCCCCCC-CHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHhceEEeCccCCHHHHHHHhCCHHHcCC-CcccchhhCCHhhccCCCcc-chHHHHHHHhhheee
Confidence 9999999999999999999999999999999999999999999 99999999999999998776 999999999999999
Q ss_pred cCCCCCCcccCCCCCCCCCcccccCcccccccccccccccccccccCccccccccCCCC-CchHHHHHhhCCCcchheee
Q psy15244 532 NGPMTPLYVNVKPVNVDPVIDRTVSKFETSCADFVSDMNERSKIRTDTDEKYLIKKPQA-NGYRKLLQVMGAGEFVTTVR 610 (1427)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 610 (1427)
||+++... ..+|....|.+|.+.. ..|+| .||||+|+++||
T Consensus 479 ~~~~~~~~-~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~-------- 520 (1150)
T 3hbl_A 479 NGFPNVEK-RPKPDYELASIPTVSS-----------------------------SKIASFSGTKQLLDEVGP-------- 520 (1150)
T ss_dssp HCCTTSCC-CCCCCCCCCCCCCCCH-----------------------------HHHHTCCCHHHHHHHHHH--------
T ss_pred cCCCcccC-CCCCCCCCCCCCCCCC-----------------------------CCCCCCCCHHHHHHhhCH--------
Confidence 99874332 2345555566664321 01445 899999999999
Q ss_pred ccceeEeecccccccchhhhhccccccccccccccccccccccccCCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHH
Q psy15244 611 KLKHVLLTDTTFRDAHQSLLATRVRTYDLKKVMMGAGEFVNSVRKLKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFV 690 (1427)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l 690 (1427)
++|++||+++++|+|+||||||||||++++||+++||++||+.|
T Consensus 521 ------------------------------------~~~~~~~~~~~~v~I~DtTlRDG~Qs~~~~r~~~~~kl~ia~~L 564 (1150)
T 3hbl_A 521 ------------------------------------KGVAEWVKKQDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKT 564 (1150)
T ss_dssp ------------------------------------HHHHHHHTTCSSBEEEECTTTHHHHHHSTTCCCHHHHHHHHHHH
T ss_pred ------------------------------------HHHHHHHHhCCceEEEECccchhhccCCCcCCCHHHHHHHHHHH
Confidence 69999999999999999999999999998999999999999999
Q ss_pred HhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHHHHHhcCCCEE
Q psy15244 691 ANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIF 770 (1427)
Q Consensus 691 ~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~ 770 (1427)
+++..|+++||+|||++|+++++|++++||++++.+++.+||+++|||+||+|.+||++||+|++++|+++|+++|+|+|
T Consensus 565 ~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~v~~~~v~~a~~~Gvd~i 644 (1150)
T 3hbl_A 565 ADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLFQMLLRASNAVGYKNYPDNVIHKFVQESAKAGIDVF 644 (1150)
T ss_dssp HHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred HHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhCCCCeEEEEeccccccccccCCchhHHHHHHHHHhCCcCEE
Confidence 99666999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHH
Q psy15244 771 RVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNP-NKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPT 849 (1427)
Q Consensus 771 rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p-~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~ 849 (1427)
|||+++||+++++.+++.+++.|. .+++++||++|+.+| +.++|+++||+++++++.++|||+|+||||+|+++|.
T Consensus 645 rif~~~sd~~~~~~~~~~~~e~g~---~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~ 721 (1150)
T 3hbl_A 645 RIFDSLNWVDQMKVANEAVQEAGK---ISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPK 721 (1150)
T ss_dssp EEECTTCCGGGGHHHHHHHHHTTC---EEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHH
T ss_pred EEEeeCCHHHHHHHHHHHHHHHhh---heeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHH
Confidence 999999999999999999999999 999999999988887 4678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCCCCCChhh
Q psy15244 850 AAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKRCGIDLHD 929 (1427)
Q Consensus 850 ~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~tgidl~~ 929 (1427)
+++++|++||+++ ++||++|+|||+|||+||+++|++|||++||+|++|||||||||+||+|+++|+.+|++|++|+
T Consensus 722 ~~~~lv~~l~~~~-~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ai~GlG~~~gn~~lE~lv~~L~~~g~~tgidl-- 798 (1150)
T 3hbl_A 722 AAYELIGELKSAV-DLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQPSANSLYYALNGFPRHLRTDI-- 798 (1150)
T ss_dssp HHHHHHHHHHHHC-CSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCCBHHHHHHHTTTSSCCBCSCH--
T ss_pred HHHHHHHHHHHhc-CCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEEeccccCCCCCCccHHHHHHHHHhcCCCcCccH--
Confidence 9999999999997 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcccccchhhhhHHHHHHHHHHhhhhcCCCCCCCCCcCcccEEEecCCCccHHHHHHHHHH
Q psy15244 930 VCDYSSYWRKVRELYAPAHNLLWRCGIDLHDVCDYSSYWRKVRELYAPFECTDLKAASSEAYLYEIPGGQYTNLKFRTMS 1009 (1427)
Q Consensus 930 L~~l~~~v~~~~g~~~~~~kpivG~~~f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~~~v~~~~~pGg~~snl~~ql~~ 1009 (1427)
..+...++||.+++..|.+|+ +.+++.+.+||.|||||||+|||++||++
T Consensus 799 -----------------------------~~l~~~~~~~~~~~~~y~~~~-~~~~~~~~~v~~~~~PGg~~snl~~q~~~ 848 (1150)
T 3hbl_A 799 -----------------------------EGMESLSHYWSTVRTYYSDFE-SDIKSPNTEIYQHEMPGGQYSNLSQQAKS 848 (1150)
T ss_dssp -----------------------------HHHHHHHHHHHHHHGGGGGGC-CSCCSCCTTHHHHCCCSSHHHHHHHHHHH
T ss_pred -----------------------------HHHHHHHHHHHHHHhhhcccc-CCCCCCccceEEeeCCCchhhHHHHHHHH
Confidence 555566777778899999999 88999999999999999999999999999
Q ss_pred CCC--CHHHHHHHHHHHHHHcCCCCccccchhhHHHHHHHHHHcCCChhhhhhccccccccHhHHHHhccccCCCCCCCC
Q psy15244 1010 FGL--DFEDVKRAYRTANFLLGDIIKCTPSSKVVADLAIFMTQEKLSYRDVMENADKIIFPKSVTEFFQGSIGEPYQGFP 1087 (1427)
Q Consensus 1010 ~gl--~~~ev~~~~~~v~~~lG~~~~vTP~sq~vg~~a~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~g~~~~~~~ 1087 (1427)
+|+ +|+||+++|++||++||||||||||||||||||+|||+|||+++++.++.++++||+||++|++|+||+||+|||
T Consensus 849 ~g~~~~~~~v~~~~~~v~~~~g~~~~vtp~sq~vg~~a~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~G~~g~~~~~~~ 928 (1150)
T 3hbl_A 849 LGLGERFDEVKDMYRRVNFLFGDIVKVAPSSKVVGDMALYMVQNDLDEQSVITDGYKLDFPESVVSFFKGEIGQPVNGFN 928 (1150)
T ss_dssp TTCGGGHHHHHHHHHHHHHHTTSCCCCTTHHHHHHHHHHHHHHTTCCTTHHHHSGGGCCCCHHHHHHTTTSSCCCTTCCC
T ss_pred CCcHhHHHHHHHHHHHHHHHcCCCceECchhHHHHHHHHHHHHcCCChhhhhcccccccCCHHHHHHhCcCCCCCCCCCC
Confidence 999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHhCCCCCcccCCCCCCCccccccccCCCccccccccChhhHHHHHhHhhhcCCCCCCCchhcccccccccccCC
Q psy15244 1088 KKLQEKVLDSLKDHALERKAEFDPIMACDYREDEPFKMNKLIFPKATKKFMKFRDEFGPVDKLPTRIFFHALERKAEFDP 1167 (1427)
Q Consensus 1088 ~~~~~~~l~~~~~~~~rp~~~~~~~~~~~~~e~~~~d~~~~~~p~~~~~~~~~~~~~g~~~~l~t~~f~~~~~~~~~~~~ 1167 (1427)
++|+++||+|++++++||+++ ++|.||+++ ++ ++.+++| .+
T Consensus 929 ~~~~~~~~~~~~~~~~rp~~~-----------~~~~d~~~~-----~~---~~~~~~~--------------------~~ 969 (1150)
T 3hbl_A 929 KDLQAVILKGQEALTARPGEY-----------LEPVDFEKV-----RE---LLEEEQQ--------------------GP 969 (1150)
T ss_dssp HHHHHHHHTTCCCCSSCGGGG-----------SCCCCHHHH-----HH---HHHHHSC--------------------SC
T ss_pred HHHHHHHhcCCCCccCCcccc-----------CChhhHHHH-----HH---HHHHhhC--------------------CC
Confidence 999999999999999999999 999998888 87 7777777 35
Q ss_pred ccccccccCccchhhhhcCchhHHHHHHHhhccCCCCCCCcccccCCCCCCcEEEEEeeCCcEEEeeecccccccccCcc
Q psy15244 1168 IMACDCRENEPVKMNELIFPKATKKFMKFRDEFGPVDKLPTRIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGE 1247 (1427)
Q Consensus 1168 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~f~~g~~~g~~~~v~~~~Gk~~~i~~~~~~~~~~~~~~ 1247 (1427)
.++|| +|+|+|||+++.+|+++|++|||++.|||+.||+|+++|+++.+++++||++.|+
T Consensus 970 ~~~~~-------~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~------------- 1029 (1150)
T 3hbl_A 970 VTEQD-------IISYVLYPKVYEQYIQTRNQYGNLSLLDTPTFFFGMRNGETVEIEIDKGKRLIIK------------- 1029 (1150)
T ss_dssp CCHHH-------HHHHHHSHHHHHHHHHHHHHHCCGGGSCHHHHHHCCCTTCEEEEEEETTEEEEEE-------------
T ss_pred CCHHH-------HHHHHcCCHHHHHHHHHHHhcCCcccCCchhhhcCCCCCceEEEEccCCcEEEEE-------------
Confidence 78999 9999999999999999999999999999999999999999999999999999998
Q ss_pred eeEEEEeccceeeeeeccccccccCCCchhhhhcccccceeccCCCCCcceeeeeecCCcceEEEeecccccccCCceEE
Q psy15244 1248 RTVFFLYNGLHTTNTYNLQQILKTSPSDVFAFLRLKSERIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTV 1327 (1427)
Q Consensus 1248 r~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~s~~v~v~~~~~g~~~~~~v~~Gd~~~~~~~~i~~~~~~~g~r~v 1327 (1427)
+.++++++.+ |.+++
T Consensus 1030 ----------------------------------------------------------------l~~~~~~~~~-g~~~~ 1044 (1150)
T 3hbl_A 1030 ----------------------------------------------------------------LETISEPDEN-GNRTI 1044 (1150)
T ss_dssp ----------------------------------------------------------------EEEECCCCTT-SEEEE
T ss_pred ----------------------------------------------------------------ecccCCCCCC-CceEE
Confidence 4455554444 77777
Q ss_pred EEEECCEEeEe---chhhhhhhhccccCCCCCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeE
Q psy15244 1328 FFLYNGQLRSL---DKNKAKKLKLRSKADSDTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGV 1404 (1427)
Q Consensus 1328 ~~elnG~~~~v---d~~~~~~~~~~~~a~~~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~ 1404 (1427)
+|++||+.+.| |..........+++++.++.+|.|||+|+|++|+|++||.|++||+|++|||||||++|+||.+|+
T Consensus 1045 ~~e~nG~~~~v~v~~~~~~~~~~~~~~~~~~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~ieamK~~~~i~ap~~G~ 1124 (1150)
T 3hbl_A 1045 YYAMNGQARRIYIKDENVHTNANVKPKADKSNPSHIGAQMPGSVTEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGV 1124 (1150)
T ss_dssp EEEETTEEEEEEEECCCSSSCCCCCCBCCTTCSSEEECSSSEEEEEECCCTTCEECTTCEEEEEESSSCEEEEECSSSEE
T ss_pred EEEECCeEEEEecccccccccccccccCCCCCCceeecCceEEEEEEEeCCCCEECCCCEEEEEEeccceeEEecCCCeE
Confidence 77777777776 333222333456788889999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCeeCCCCEEEEEe
Q psy15244 1405 VKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1405 V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
|++++|++|+.|+.|++|++|+
T Consensus 1125 v~~i~v~~G~~V~~g~~l~~i~ 1146 (1150)
T 3hbl_A 1125 IKQVTVNNGDTIATGDLLIEIE 1146 (1150)
T ss_dssp EEEECCCTTCEECTTBEEEEEC
T ss_pred EEEEEeCCCCEeCCCCEEEEEe
Confidence 9999999999999999999986
No 2
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=2.3e-209 Score=2061.21 Aligned_cols=1135 Identities=43% Similarity=0.727 Sum_probs=986.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCC------CCcccCCCCHHHHHHHHHh
Q psy15244 55 KTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKG------MPPVAAYLNIPEIICIAKN 128 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~------~~~~~~yldi~~Ii~ia~~ 128 (1427)
.|++||||+||||||++++|+|+++|++++++++++|..++|.++||++|+++.. ..+..+|+|++.|+++|++
T Consensus 12 ~~~~~~lianrGeia~riiraa~elGi~vvav~s~~d~~a~~~~~ADe~~~i~~~~~~~~~~~~~~~yld~~~I~~~a~~ 91 (1165)
T 2qf7_A 12 GPISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLALHRFKADESYQVGRGPHLARDLGPIESYLSIDEVIRVAKL 91 (1165)
T ss_dssp CCCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCHHHHSSSSEEECSCSTTSSSCCCTTHHHHCHHHHHHHHHH
T ss_pred CcceEEEEcCCcHHHHHHHHHHHHcCCEEEEEECCCcccchhHHhCCEEEEcCCcccccccCCccccccCHHHHHHHHHH
Confidence 5799999999999999999999999999999999999888999999999999743 3566789999999999999
Q ss_pred cCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcC
Q psy15244 129 NNVDAIHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVE 208 (1427)
Q Consensus 129 ~~vDaI~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iG 208 (1427)
+++|+|||||||++|++.+++.|++.|++|+||++++++.++||..+|++|+++|||+|++....+.+.+++.++++++|
T Consensus 92 ~~iD~V~pg~g~lsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GIPvp~~~~~~v~s~eea~~~a~~ig 171 (1165)
T 2qf7_A 92 SGADAIHPGYGLLSESPEFVDACNKAGIIFIGPKADTMRQLGNKVAARNLAISVGVPVVPATEPLPDDMAEVAKMAAAIG 171 (1165)
T ss_dssp HTCSEEECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBC---------------------
T ss_pred hCCCEEEECCCchhcCHHHHHHHHHcCCceECCCHHHHHHHCCHHHHHHHHHHcCCCCCCeeCcCCCCHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999986335788999999999999
Q ss_pred CcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccc
Q psy15244 209 FPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQ 288 (1427)
Q Consensus 209 yPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~q 288 (1427)
||+||||..|+||+||++|++.+||.++++.+.+++...|+++.++||+||++++|++|++++|++|+++++++|+|+++
T Consensus 172 yPvVVKp~~g~GG~Gv~iv~s~eEL~~a~~~~~~~a~~~fg~~~vlVEefI~gg~EisV~vl~D~~G~vv~l~~r~~s~~ 251 (1165)
T 2qf7_A 172 YPVMLKASWGGGGRGMRVIRSEADLAKEVTEAKREAMAAFGKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDCSVQ 251 (1165)
T ss_dssp ------------------------------------------------CCCSSEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEeccCCcEEEEEEEEcCCCcEEEEEeecccce
Confidence 99999999999999999999999999999999888878888899999999998899999999999999999999999999
Q ss_pred cccceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEc-CCCcEEEEeeCCCCCCchhHHHHHhCCCHHHH
Q psy15244 289 RRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLD-KDDNFYFIEVNPRLQVEHTLSEEITGIDVVQS 367 (1427)
Q Consensus 289 r~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd-~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~ 367 (1427)
+++++.++.+|++.++++.+++|.+.+.++++++||+|++++||+++ ++|++||||||||+|++|+++++++|+|++++
T Consensus 252 r~~~~~~e~~Pa~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~vd~~dg~~~~iEiNpR~~~~~~vte~~tGiDl~~~ 331 (1165)
T 2qf7_A 252 RRNQKVVERAPAPYLSEAQRQELAAYSLKIAGATNYIGAGTVEYLMDADTGKFYFIEVNPRIQVEHTVTEVVTGIDIVKA 331 (1165)
T ss_dssp ETTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHH
T ss_pred ecccceEEecccccCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEECCCCCEEEEEEEcCCCCCchhhhhhhCCCHHHH
Confidence 99999999999988999999999999999999999999999999999 78899999999999999999999999999999
Q ss_pred HHHHHcCCCCccc--cc-cccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCcc
Q psy15244 368 QIKIAQGKSLTEL--GL-CQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDS 444 (1427)
Q Consensus 368 ~i~iA~G~~l~~l--~l-~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds 444 (1427)
++++++|.+++++ ++ .|+.+..+|||++|||++|+|.++|.|++|+|..+++|+++|+|++.+..+.|+.|+++|||
T Consensus 332 ~i~~a~G~~l~~~~~g~p~q~~~~~~g~Ai~~ri~ae~P~~~f~p~~G~I~~~~~~~~~gvrvd~g~~~~G~~v~~~~d~ 411 (1165)
T 2qf7_A 332 QIHILDGAAIGTPQSGVPNQEDIRLNGHALQCRVTTEDPEHNFIPDYGRITAYRSASGFGIRLDGGTSYSGAIITRYYDP 411 (1165)
T ss_dssp HHHHHTTCCTTSGGGTCCCGGGCCCCSEEEEEEEESEETTTTTEECCEECCEEECCCCTTEEEECCSCCTTCEECSSSCC
T ss_pred HHHHHcCCCccccccccccccccccCcEEEEEEEEecCCccCcCCCCcEEEEEecCCCCceEeeeccCCCCCEeCCCCCC
Confidence 9999999998754 23 46667789999999999999999999999999999999889999996555789999999999
Q ss_pred ceEEEEEEcCCHHHHHHHHHHHhhccEEcccccCHHHHHhhcCCcccccCCccccccccCcchhhhcCCcchhHHHHHHH
Q psy15244 445 LLAKIIVHTATYKSSCEKMRRALEETQVSGVTTNLPFLLNVFDDKKFLSGEALETNFIDDNPQLLERNSYQTCRDMKILR 524 (1427)
Q Consensus 445 ~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv~tni~~l~~~l~~~~f~~g~~~~t~~i~~~~~l~~~~~~~~~~~~~~~~ 524 (1427)
++|+|+++|+|+++|+++|+++|++++|+|++|||+||+++|.||+|++| +++|+||+++|+||...... +|++|||+
T Consensus 412 ~l~~vi~~g~t~~eA~~~~~~al~~i~i~G~~tni~~~~~~~~~~~f~~~-~~~t~~~~~~~~~~~~~~~~-~~~~~~~~ 489 (1165)
T 2qf7_A 412 LLVKVTAWAPNPLEAISRMDRALREFRIRGVATNLTFLEAIIGHPKFRDN-SYTTRFIDTTPELFQQVKRQ-DRATKLLT 489 (1165)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHTSHHHHTT-CCCTTTTTTCGGGGCCCCCC-CHHHHHHH
T ss_pred ceEEEEEEeCCHHHHHHHHHHHhhcEEEecccCCHHHHHHHhcCHHhhcC-CccchhhhcChhhhcCcccc-chHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999998877 99999999
Q ss_pred HHHHhhhcCCCCCCcccCCCCCC--CCCcccccCcccccccccccccccccccccCccccccccCCCCCchHHHHHhhCC
Q psy15244 525 FIGETLVNGPMTPLYVNVKPVNV--DPVIDRTVSKFETSCADFVSDMNERSKIRTDTDEKYLIKKPQANGYRKLLQVMGA 602 (1427)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (1427)
||+|++|||+++.... .+|... .|.+|.+.. ..+|.||||+|+++||
T Consensus 490 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~ 538 (1165)
T 2qf7_A 490 YLADVTVNGHPEAKDR-PKPLENAARPVVPYANG------------------------------NGVKDGTKQLLDTLGP 538 (1165)
T ss_dssp HHHHHHHHCCTTTTTS-CCCCSSCCCCCCCCC-C------------------------------CSCCCCHHHHHHHHCH
T ss_pred HHHHheecCCCccccC-CCCCCCcCCCCCCCCCC------------------------------CCCCCCHHHHHHhhCH
Confidence 9999999998875543 334333 355654211 1237999999999999
Q ss_pred CcchheeeccceeEeecccccccchhhhhccccccccccccccccccccccccCCCeEEeecCcccCCCCCCCcccCHHH
Q psy15244 603 GEFVTTVRKLKHVLLTDTTFRDAHQSLLATRVRTYDLKKVMMGAGEFVNSVRKLKHILLTDTTFRDAHQSLLATRVRTYD 682 (1427)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~v~i~DtTlRDG~Qsl~a~r~~t~d 682 (1427)
++|++|++++++|+|+|||||||+||+++++|+++|
T Consensus 539 --------------------------------------------~~~~~~~~~~~~v~i~DtTLRDG~Qs~~~~~~~~~d 574 (1165)
T 2qf7_A 539 --------------------------------------------KKFGEWMRNEKRVLLTDTTMRDGHQSLLATRMRTYD 574 (1165)
T ss_dssp --------------------------------------------HHHHHHHHHCSSCEEEECTTTHHHHHHHTTCCCHHH
T ss_pred --------------------------------------------HHHHHHhhcCCceEEEecccccccccCCcccCCHHH
Confidence 699999999999999999999999999888999999
Q ss_pred HHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHHHH
Q psy15244 683 LKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLA 762 (1427)
Q Consensus 683 ~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a 762 (1427)
|++||+.|+++..|+++||+||||+|++|+||++++||++++.+++.+||+++|||+||+|++||++||+|++++|+++|
T Consensus 575 kl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~~~~~~~i~~a 654 (1165)
T 2qf7_A 575 IARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVKYFVRQA 654 (1165)
T ss_dssp HHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHHHHHHchhhHHHHHhccccccccccCCchhHHHHHHHH
Confidence 99999999996568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccc
Q psy15244 763 SQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDM 842 (1427)
Q Consensus 763 ~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt 842 (1427)
+++|+|+||||+++||+++|+.+++++++.|. .+++++||++||.||+++.++++||+++++++.++|||+|+||||
T Consensus 655 ~~~g~d~irif~sl~~~~~~~~~i~~~~~~g~---~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT 731 (1165)
T 2qf7_A 655 AKGGIDLFRVFDCLNWVENMRVSMDAIAEENK---LCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDM 731 (1165)
T ss_dssp HHHTCCEEEEECTTCCGGGGHHHHHHHHHTTC---EEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEET
T ss_pred HhcCcCEEEEEeeHHHHHHHHHHHHHHHhccc---eEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 99999999999999999999999999999999 999999999999999877799999999999999999999999999
Q ss_pred cCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCC
Q psy15244 843 AGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKR 922 (1427)
Q Consensus 843 ~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~ 922 (1427)
+|+++|.+++++|++||+++ +++|++|||||+|||+||+++|++|||++||+|++|||||+|||+||+|+++|+.+|++
T Consensus 732 ~G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ti~GlGe~~Gn~~le~vv~~L~~~g~~ 810 (1165)
T 2qf7_A 732 AGLLKPAAAKVLFKALREAT-GLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDALSGNTSQPCLGSIVEALSGSERD 810 (1165)
T ss_dssp TCCCCHHHHHHHHHHHHHHC-SSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCCBHHHHHHHHTTSTTC
T ss_pred cCCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHhCCCEEEecccccCCCccchhHHHHHHHHHhcCCC
Confidence 99999999999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHhCCCCCCCCcccccchhhhhHHHHHHHHHHhhhhcCCCCCCCCCcCcccEEEecCCCccHHH
Q psy15244 923 CGIDLHDVCDYSSYWRKVRELYAPAHNLLWRCGIDLHDVCDYSSYWRKVRELYAPFECTDLKAASSEAYLYEIPGGQYTN 1002 (1427)
Q Consensus 923 tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~~~f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~~~v~~~~~pGg~~sn 1002 (1427)
+++|+++|. ..+++|.+.+..|.||+ +.+.+.++++|.|++||||+||
T Consensus 811 tgidl~~L~-------------------------------~~s~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~pGG~~sn 858 (1165)
T 2qf7_A 811 PGLDPAWIR-------------------------------RISFYWEAVRNQYAAFE-SDLKGPASEVYLHEMPGGQFTN 858 (1165)
T ss_dssp CCCCHHHHH-------------------------------HHHHHHHHHHGGGGGGC-CCCCSCCTTHHHHCCCHHHHHH
T ss_pred ccccHHHHH-------------------------------HHHHHHHHHhhhccCCC-CCccCCccceEeccCCCccHHH
Confidence 999995555 44555566777888999 8899999999999999999999
Q ss_pred HHHHHHHCCC--CHHHHHHHHHHHHHHcCCCCccccchhhHHHHHHHHHHcCCChhhhhhccccccccHhHHHHhccccC
Q psy15244 1003 LKFRTMSFGL--DFEDVKRAYRTANFLLGDIIKCTPSSKVVADLAIFMTQEKLSYRDVMENADKIIFPKSVTEFFQGSIG 1080 (1427)
Q Consensus 1003 l~~ql~~~gl--~~~ev~~~~~~v~~~lG~~~~vTP~sq~vg~~a~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~g 1080 (1427)
+++|++++|+ +|++|+++|++||+++|||++|||+||||||||+|||++|++++++.+++++++||+||++|++|+||
T Consensus 859 l~~q~~~~g~~~~~~~v~~~~~~v~~~~G~~~~vtp~Sq~vg~~A~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 938 (1165)
T 2qf7_A 859 LKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSSKVVGDMALMMVSQDLTVADVVSPDREVSFPESVVSMLKGDLG 938 (1165)
T ss_dssp HHHHHHHTTCGGGHHHHHHHHHHHHHHTTSCCCSTTHHHHHHHHHHHHHHHTCCHHHHHCTTSCCCCCHHHHHHHHTTTC
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHcCCCccCCChhHHHHHHHHHHHHcCCChhhhccccccccCCHHHHHHhCcCCC
Confidence 9999999999 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHhHHHHHhCCCCCcccCCCCCCCccccccccCCCccccccccChhhHHHHHhHhhhcCCCCCCCchhcccccc
Q psy15244 1081 EPYQGFPKKLQEKVLDSLKDHALERKAEFDPIMACDYREDEPFKMNKLIFPKATKKFMKFRDEFGPVDKLPTRIFFHALE 1160 (1427)
Q Consensus 1081 ~~~~~~~~~~~~~~l~~~~~~~~rp~~~~~~~~~~~~~e~~~~d~~~~~~p~~~~~~~~~~~~~g~~~~l~t~~f~~~~~ 1160 (1427)
+||+|||++|++++|++++++++||+++ ++|.||+++ ++ ++.+++|
T Consensus 939 ~~~~~~~~~~~~~~l~~~~~~~~rp~~~-----------~~~~~~~~~-----~~---~~~~~~~--------------- 984 (1165)
T 2qf7_A 939 QPPSGWPEALQKKALKGEKPYTVRPGSL-----------LKEADLDAE-----RK---VIEKKLE--------------- 984 (1165)
T ss_dssp CCTTCCCHHHHHHHHTTCCCCCSCGGGG-----------SCCCCHHHH-----HH---HHHHHHT---------------
T ss_pred CCCCCCCHHHHHHHhCCCCcCcCCcccc-----------CCcccHHHH-----HH---HHHHhhc---------------
Confidence 9999999999999999999999999999 999898888 87 6766666
Q ss_pred cccccCCccccccccCccchhhhhcCchhHHHHHHHhhccCCCCCCCcccccCCCCCCcEEEEEeeCCcEEEeeeccccc
Q psy15244 1161 RKAEFDPIMACDCRENEPVKMNELIFPKATKKFMKFRDEFGPVDKLPTRIFLNGPNIGEEFSCEFKTGDTAYVTTLSISE 1240 (1427)
Q Consensus 1161 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~f~~g~~~g~~~~v~~~~Gk~~~i~~~~~~~ 1240 (1427)
+..++|| +|+|+|||+++.+|++++++||+++.|||+.||+|+++|+++.+++++||++.++
T Consensus 985 -----~~~~~~~-------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~~~~~------ 1046 (1165)
T 2qf7_A 985 -----REVSDFE-------FASYLMYPKVFTDFALASDTYGPVSVLPTPAYFYGLADGEELFADIEKGKTLVIV------ 1046 (1165)
T ss_dssp -----SCCCHHH-------HHHHHHCHHHHHHHHHHHHHHCCGGGSCHHHHHHCCCTTCEEEEEEETTEEEEEE------
T ss_pred -----CCCCHHH-------HHHHHcCcHHHHHHHHHHHhcCCcccCCchhhhcCCCcCceeeecccCCccceeE------
Confidence 3468899 9999999999999999999999999999999999999999999999999999987
Q ss_pred ccccCcceeEEEEeccceeeeeeccccccccCCCchhhhhcccccceeccCCCCCcceeeeeecCCcceEEEeecccccc
Q psy15244 1241 HLNDHGERTVFFLYNGLHTTNTYNLQQILKTSPSDVFAFLRLKSERIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLN 1320 (1427)
Q Consensus 1241 ~~~~~~~r~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~s~~v~v~~~~~g~~~~~~v~~Gd~~~~~~~~i~~~~~ 1320 (1427)
+.++++++.
T Consensus 1047 -----------------------------------------------------------------------~~~~~~~~~ 1055 (1165)
T 2qf7_A 1047 -----------------------------------------------------------------------NQAVSATDS 1055 (1165)
T ss_dssp -----------------------------------------------------------------------EEEECCCCT
T ss_pred -----------------------------------------------------------------------ecccCCCcc
Confidence 444444444
Q ss_pred cCCceEEEEEECCEEeEe---chhhhh-hhhccccCCCCCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceee
Q psy15244 1321 DHGERTVFFLYNGQLRSL---DKNKAK-KLKLRSKADSDTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETL 1396 (1427)
Q Consensus 1321 ~~g~r~v~~elnG~~~~v---d~~~~~-~~~~~~~a~~~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~ 1396 (1427)
.|.++++|++||+.+.| +..... .....+++++.++.+|.|||+|+|++|.|++||.|++||+|++||+||||++
T Consensus 1056 -~g~~~~~~evnG~~~~v~v~~~~~~~~~~~~~~~a~~~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~iEamKme~~ 1134 (1165)
T 2qf7_A 1056 -QGMVTVFFELNGQPRRIKVPDRAHGATGAAVRRKAEPGNAAHVGAPMPGVISRVFVSSGQAVNAGDVLVSIEAMKMETA 1134 (1165)
T ss_dssp -TSEEEEEEEETTEEEEEEEECGGGTCCSCCCSCBCCTTCTTEEECSSCEEEEEECCSSCCCC---CEEEEEEC---CEE
T ss_pred -CCceEEEEEECCEEEEEEecCcccccccccccccCCCCCCceeeCCCCeEEEEEEcCCcCEeCCCCEEEEEEcccceEE
Confidence 37778888888888777 332221 1223456677788999999999999999999999999999999999999999
Q ss_pred eecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1397 IHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1397 i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
|.||.+|+|+++.+++|+.|+.|++|++|+
T Consensus 1135 i~Ap~~G~V~~i~v~~G~~V~~g~~l~~i~ 1164 (1165)
T 2qf7_A 1135 IHAEKDGTIAEVLVKAGDQIDAKDLLAVYG 1164 (1165)
T ss_dssp EECCSSCCCCEECCCSSCEECTTBEEEEC-
T ss_pred EEcCCCEEEEEEEeCCCCEECCCCEEEEec
Confidence 999999999999999999999999999875
No 3
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=100.00 E-value=3.6e-141 Score=1331.50 Aligned_cols=705 Identities=46% Similarity=0.826 Sum_probs=611.0
Q ss_pred CcccccCCccccccccCcchhhhcCCcchhHHHHHHHHHHHhhhcCCCCCCcccCCCCCCCCCcccccCccccccccccc
Q psy15244 488 DKKFLSGEALETNFIDDNPQLLERNSYQTCRDMKILRFIGETLVNGPMTPLYVNVKPVNVDPVIDRTVSKFETSCADFVS 567 (1427)
Q Consensus 488 ~~~f~~g~~~~t~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (1427)
|..-.+| +|+|+|||+|||||++...+ ||++|||+||+|++|||+++......++....|.+|.+..
T Consensus 8 ~~~~~~g-~~~t~fi~~~p~l~~~~~~~-~~~~~~l~~~~~~~vn~~~~~~~~~~~~~~~~~~~p~~~~----------- 74 (718)
T 3bg3_A 8 HHHSSGL-VPRGSHMDENPELFQLRPAQ-NRAQKLLHYLGHVMVNGPTTPIPVKASPSPTDPVVPAVPI----------- 74 (718)
T ss_dssp ---------------------------C-HHHHHHHHHHHHHHHHCCSSCCCSSCCCCSSCCCCCCCCS-----------
T ss_pred cccccCC-CeeeeeccCCHHHhCCCccC-ChHHHHHHHHHHheecCCCccccCCCCCCCCCCCCCCCcc-----------
Confidence 3445678 99999999999999999887 9999999999999999997766543232222355654211
Q ss_pred ccccccccccCccccccccCCCCCchHHHHHhhCCCcchheeeccceeEeecccccccchhhhhcccccccccccccccc
Q psy15244 568 DMNERSKIRTDTDEKYLIKKPQANGYRKLLQVMGAGEFVTTVRKLKHVLLTDTTFRDAHQSLLATRVRTYDLKKVMMGAG 647 (1427)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~ 647 (1427)
.++|.||||+|+++|| +
T Consensus 75 -------------------~~~~~g~r~~l~~~gp--------------------------------------------~ 91 (718)
T 3bg3_A 75 -------------------GPPPAGFRDILLREGP--------------------------------------------E 91 (718)
T ss_dssp -------------------SCCCCCHHHHHHHHHH--------------------------------------------H
T ss_pred -------------------CCCCCCHHHHHHHhCH--------------------------------------------H
Confidence 1237899999999999 6
Q ss_pred ccccccccCCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHH
Q psy15244 648 EFVNSVRKLKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELR 727 (1427)
Q Consensus 648 ~~~~~~~~~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr 727 (1427)
+|++||+++++|+|+|||||||+||++++||+++||++||+.|+++..|+++||+||||+||+|++|++++||++++.++
T Consensus 92 ~~~~~~~~~~~I~I~DTTLRDG~Qs~~~~r~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~ 171 (718)
T 3bg3_A 92 GFARAVRNHPGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELR 171 (718)
T ss_dssp HHHHHHHHCCSCEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHhccCCeEEeecCCChhhCCCCCcCCCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHH
Confidence 99999999999999999999999999989999999999999999966689999999999999999999999999999999
Q ss_pred HhCCCCceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeec
Q psy15244 728 ELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAG 807 (1427)
Q Consensus 728 ~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~ 807 (1427)
+.+||+++|||+||+|++||++||+|+++.|+++|+++|+|+||||+++|++++++.+++++++.|. .+++++||++
T Consensus 172 ~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~---~v~~~i~~~~ 248 (718)
T 3bg3_A 172 ELIPNIPFQMLLRGANAVGYTNYPDNVVFKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGG---VVEAAISYTG 248 (718)
T ss_dssp HHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTS---EEEEEEECCS
T ss_pred HHcccchHHHHhcccccccccccCCcchHHHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCC---eEEEEEEeec
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHH
Q psy15244 808 DLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVK 887 (1427)
Q Consensus 808 d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~ 887 (1427)
||.||.++.|+++||+++++++.++|||+|+||||+|+++|.+++++|++||+++|+++|++|||||+|||+||+++|++
T Consensus 249 d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAve 328 (718)
T 3bg3_A 249 DVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQ 328 (718)
T ss_dssp CTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHH
Confidence 99999888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHhCCCCCCCCcccccchhhhhHHHHHHH
Q psy15244 888 AGADIVDVAADSMSGICSQPAMGTIVSCLENTDKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWRCGIDLHDVCDYSSY 967 (1427)
Q Consensus 888 AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~~~f~~~~~~~~~~ 967 (1427)
|||++||+|++|||||+|||+||+|+++|+.+|+++++|+++|.++++++++
T Consensus 329 AGa~~VD~ti~GlGertGN~~lE~vv~~L~~~g~~tgidl~~L~~~s~~v~~---------------------------- 380 (718)
T 3bg3_A 329 AGADVVDVAADSMSGMTSQPSMGALVACTRGTPLDTEVPMERVFDYSEYWEG---------------------------- 380 (718)
T ss_dssp TTCSEEEEBCGGGCSTTSCCBHHHHHHHHTTSTTCCCCCHHHHHHHHHHHHH----------------------------
T ss_pred hCCCEEEecCcccccccCchhHHHHHHHHHhcCCCcccCHHHHHHHHHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999777766666555
Q ss_pred HHHhhhhcCCCC-CCCCCcCcccEEEecCCCccHHHHHHHHHHCCC--CHHHHHHHHHHHHHHcCCCCccccchhhHHHH
Q psy15244 968 WRKVRELYAPFE-CTDLKAASSEAYLYEIPGGQYTNLKFRTMSFGL--DFEDVKRAYRTANFLLGDIIKCTPSSKVVADL 1044 (1427)
Q Consensus 968 ~~~~~~~Y~~f~-~~~~~g~~~~v~~~~~pGg~~snl~~ql~~~gl--~~~ev~~~~~~v~~~lG~~~~vTP~sq~vg~~ 1044 (1427)
.+..|.||+ .+.+.+.+.++|.|++||||+||+++|++++|+ +|++|+++|++||++|||+++|||+|||||||
T Consensus 381 ---~~~~~~~~~~~~~~~g~~~~v~~~e~pGg~~snl~~q~~~~G~~~~~~~v~~~~~~v~~~lG~~~~Vtp~Sq~vg~~ 457 (718)
T 3bg3_A 381 ---ARGLYAAFDCTATMKSGNSDVYENEIPGGQYTNLHFQAHSMGLGSKFKEVKKAYVEANQMLGDLIKVTPSSKIVGDL 457 (718)
T ss_dssp ---HHHHTGGGCGGGTCCSCCTTHHHHCCCHHHHHHHHGGGTTTSCTTHHHHHHHHHHHHHHHTTSCCCCTTHHHHHHHH
T ss_pred ---HhCCCcCCcCCccccccccceeeccCcchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHcCCCccCCcHhHHHHHH
Confidence 444555554 256778899999999999999999999999999 69999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhccccccccHhHHHHhccccCCCCCCCCHhHHHHHhCCCCCcccCCCCCCCccccccccCCCccc
Q psy15244 1045 AIFMTQEKLSYRDVMENADKIIFPKSVTEFFQGSIGEPYQGFPKKLQEKVLDSLKDHALERKAEFDPIMACDYREDEPFK 1124 (1427)
Q Consensus 1045 a~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~g~~~~~~~~~~~~~~l~~~~~~~~rp~~~~~~~~~~~~~e~~~~d 1124 (1427)
|+|||++|++++++.++.+.++||+||++|++|+||+||+|||++|+++||++++++++||+++ ++|.|
T Consensus 458 A~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~~p~~~~~~~~~~~l~~~~~~~~rp~~~-----------l~~~d 526 (718)
T 3bg3_A 458 AQFMVQNGLSRAEAEAQAEELSFPRSVVEFLQGYIGVPHGGFPEPFRSKVLKDLPRVEGRPGAS-----------LPPLD 526 (718)
T ss_dssp HHHHHHTTCCHHHHHHHTTTCCCCHHHHHHTTTSSCCCSSCCCHHHHHHHHSSSCCCCSCHHHH-----------SCCCC
T ss_pred HHHHHHcCCChHHhccccccccCCHHHHHHhCcCCCCCCCCCCHHHHHHHhCCCCCCCCCcccc-----------CCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 99989
Q ss_pred cccccChhhHHHHHhHhhhcCCCCCCCchhcccccccccccCCccccccccCccchhhhhcCchhHHHHHHHhhccCCCC
Q psy15244 1125 MNKLIFPKATKKFMKFRDEFGPVDKLPTRIFFHALERKAEFDPIMACDCRENEPVKMNELIFPKATKKFMKFRDEFGPVD 1204 (1427)
Q Consensus 1125 ~~~~~~p~~~~~~~~~~~~~g~~~~l~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1204 (1427)
|+++ ++ ++.+++| .+.++|| +|+|+|||+++.+|++++++||+++
T Consensus 527 ~~~~-----~~---~~~~~~~--------------------~~~~~ed-------~l~~~~~p~~~~~~~~~~~~~g~~~ 571 (718)
T 3bg3_A 527 LQAL-----EK---ELVDRHG--------------------EEVTPED-------VLSAAMYPDVFAHFKDFTATFGPLD 571 (718)
T ss_dssp SSHH-----HH---HHHHHTC--------------------SCCCHHH-------HHHHHHCHHHHHHHHHHHHHSCCCT
T ss_pred HHHH-----HH---HHHHHhc--------------------cCCCHHH-------HHHHHhCchhHHHHHHHHHhcCCcc
Confidence 9888 88 6777776 3478899 9999999999999999999999999
Q ss_pred CCCcccccCCCCCCcEEEEEeeCCcEEEeeecccccccccCcceeEEEEeccceeeeeeccccccccCCCchhhhhcccc
Q psy15244 1205 KLPTRIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGLHTTNTYNLQQILKTSPSDVFAFLRLKS 1284 (1427)
Q Consensus 1205 ~l~~~~f~~g~~~g~~~~v~~~~Gk~~~i~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~s 1284 (1427)
.|||+.||+|+++|+++.+++++||++.++
T Consensus 572 ~l~~~~~~~~~~~~~~~~v~i~~Gk~~~i~-------------------------------------------------- 601 (718)
T 3bg3_A 572 SLNTRLFLQGPKIAEEFEVELERGKTLHIK-------------------------------------------------- 601 (718)
T ss_dssp TSCHHHHHHCCCBTCEEEEECTTSCEEEEE--------------------------------------------------
T ss_pred cCcchhhhcCCCcCceeeeecccCceeEEE--------------------------------------------------
Confidence 999999999999999999999999999988
Q ss_pred cceeccCCCCCcceeeeeecCCcceEEEeecccccccCCceEEEEEECCEEeEe---chhhhhhhhccccCCCCCCCcee
Q psy15244 1285 ERIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGQLRSL---DKNKAKKLKLRSKADSDTAGEIG 1361 (1427)
Q Consensus 1285 ~~v~v~~~~~g~~~~~~v~~Gd~~~~~~~~i~~~~~~~g~r~v~~elnG~~~~v---d~~~~~~~~~~~~a~~~~~~~V~ 1361 (1427)
+.++++++. .|.++++|++||+.+.| +.........++++++.++.+|.
T Consensus 602 ---------------------------l~~i~~~~~-~g~~~~~vevnG~~~~v~v~~~~~~~~~~~~~~a~~~~~~~v~ 653 (718)
T 3bg3_A 602 ---------------------------ALAVSDLNR-AGQRQVFFELNGQLRSILVKDTQAMKEMHFHPKALKDVKGQIG 653 (718)
T ss_dssp ---------------------------EEEEEEECT-TSEEEEEEESSSSEEEEEEECGGGTCC-----CCCCCSSSCEE
T ss_pred ---------------------------ecccCCccc-CCcEEEEEEECCEEEEEEEeccCccccccccccCCCCCCceEe
Confidence 222332222 25555555555555554 11111111113356666788999
Q ss_pred cCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1362 APMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1362 APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
|||+|+|++|.|++||.|++||+|++||+||||++|+||.+|+|.++.+++|+.|+.|++|++|+
T Consensus 654 ap~~G~V~~v~V~~Gd~V~~Gq~L~~iEamKme~~I~Ap~~G~V~~i~v~~G~~V~~G~~L~~i~ 718 (718)
T 3bg3_A 654 APMPGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDMTLEGDDLILEIE 718 (718)
T ss_dssp CSSCEEEEEECSCTTCCBCTTCCCEEEESSSCEEEECCCCCBCBCCCCCCSEEEECSSCEEECBC
T ss_pred CCCCeEEEEEEeCCCCeeCCCCEEEEEecccceeEEecCCCeEEEEEecCCCCEeCCCCEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999874
No 4
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=100.00 E-value=7.2e-98 Score=900.53 Aligned_cols=450 Identities=31% Similarity=0.532 Sum_probs=416.7
Q ss_pred cCCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCc
Q psy15244 655 KLKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIP 734 (1427)
Q Consensus 655 ~~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~ 734 (1427)
.+++|+|+|||||||+||+++++|+++||++|++.|++ +|+++||+|+|++|++++||++++||++++.+++.+|+++
T Consensus 4 ~~~~V~I~DtTLRDG~Qs~~~~~~~~~dkl~Ia~~L~~--~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~ 81 (464)
T 2nx9_A 4 AIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQ--IGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTP 81 (464)
T ss_dssp CCCCCEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHT--SCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSC
T ss_pred CCCCcEEEECCccccccCCCCcCCCHHHHHHHHHHHHH--cCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCCe
Confidence 45789999999999999998889999999999999999 7999999999999999999999999999999999999999
Q ss_pred eeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCC
Q psy15244 735 FQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNK 814 (1427)
Q Consensus 735 ~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~ 814 (1427)
+|||+||.|.+||++||+|+++.|+++|+++|+|+||||+++||++|++.+++++++.|. .+++++||+. +
T Consensus 82 l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~---~v~~~i~~~~---~--- 152 (464)
T 2nx9_A 82 LQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGA---HAQGTLCYTT---S--- 152 (464)
T ss_dssp EEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTC---EEEEEEECCC---C---
T ss_pred EEEEeccccccCcccccchhhHHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCC---EEEEEEEeee---C---
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999882 2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEE
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVD 894 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD 894 (1427)
.+|+++|++++++++.++|||+|+||||+|+++|.+++++|++|++++ +++|++|||||+|+|+||+++|++|||++||
T Consensus 153 ~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD 231 (464)
T 2nx9_A 153 PVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQV-DVELHLHCHSTAGLADMTLLKAIEAGVDRVD 231 (464)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC-CSCEEEEECCTTSCHHHHHHHHHHTTCSEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCChHHHHHHHHHHhCCCEEE
Confidence 379999999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred eccccCCCCCCCCcHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHhCCCCCCCCcccccchhhhhHHHHHHHHHHhhhh
Q psy15244 895 VAADSMSGICSQPAMGTIVSCLENTDKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWRCGIDLHDVCDYSSYWRKVREL 974 (1427)
Q Consensus 895 ~av~GmG~~tgn~~lE~vv~~L~~~g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~~~f~~~~~~~~~~~~~~~~~ 974 (1427)
+|++|||+|+||++||+|+++|+.+|+++++|+++|.++ +++|.+.+..
T Consensus 232 ~ti~g~gertGN~~lE~lv~~L~~~g~~tgidl~~L~~i-------------------------------s~~v~~~~~~ 280 (464)
T 2nx9_A 232 TAISSMSGTYGHPATESLVATLQGTGYDTGLDIAKLEQI-------------------------------AAYFRDVRKK 280 (464)
T ss_dssp EBCGGGCSTTSCCBHHHHHHHHTTSTTCCCCCHHHHHHH-------------------------------HHHHHHHHHH
T ss_pred EeccccCCCCcCHHHHHHHHHHHhcCCCcccCHHHHHHH-------------------------------HHHHHHHHhh
Confidence 999999999999999999999999999999999655544 5555556777
Q ss_pred cCCCCCCCCCcCcccEEEecCCCccHHHHHHHHHHCCC--CHHHHHHHHHHHHHHcCCCCccccchhhHHHHHHHHHHcC
Q psy15244 975 YAPFECTDLKAASSEAYLYEIPGGQYTNLKFRTMSFGL--DFEDVKRAYRTANFLLGDIIKCTPSSKVVADLAIFMTQEK 1052 (1427)
Q Consensus 975 Y~~f~~~~~~g~~~~v~~~~~pGg~~snl~~ql~~~gl--~~~ev~~~~~~v~~~lG~~~~vTP~sq~vg~~a~~~v~~~ 1052 (1427)
|.||+ +.+++.++++|.|++||||+||+.+|++++|+ +|++|+++|++||+++||||||||+||+||+||+|||.+|
T Consensus 281 ~~~~~-~~~~g~~~~v~~~~~pGg~~snl~~q~~~~g~~~~~~~v~~~~~~v~~~~G~~~~VTP~Sq~~g~~A~~~vl~~ 359 (464)
T 2nx9_A 281 YHAFE-GMMKGSDARILVAQVPGGMLTNMESQLKQQNALDKLDLVLEEIPRVREELGFLPLVTPTSQIVGTQAVINVVLG 359 (464)
T ss_dssp TGGGC-CSCCSCCTHHHHHCCCHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHTTTCCSCTTHHHHHHHHHHHHHHTS
T ss_pred ccccc-CCCcCCcCCeEEecCCCchHhHHHHHHHHcCCHhHHHHHHHHHHHHHHHcCCCcccCchhHhhHHHHHHHHHcC
Confidence 99999 89999999999999999999999999999999 9999999999999999999999999999999999999887
Q ss_pred CChhhhhhccccccccHhHHHHhccccCCCCCCCCHhHHHHHhCCCCCcccCCCCCCCccccccccCCCccccccccChh
Q psy15244 1053 LSYRDVMENADKIIFPKSVTEFFQGSIGEPYQGFPKKLQEKVLDSLKDHALERKAEFDPIMACDYREDEPFKMNKLIFPK 1132 (1427)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~v~~~~~g~~g~~~~~~~~~~~~~~l~~~~~~~~rp~~~~~~~~~~~~~e~~~~d~~~~~~p~ 1132 (1427)
.+|+ +||+||++|++|+||+||+|||++|+++||++++++++||++. ++| ||+++
T Consensus 360 ~~~~---------~~~~~~~~~~~G~~G~~p~~~~~~~~~~~l~~~~~~~~rp~~~-----------~~~-~~~~~---- 414 (464)
T 2nx9_A 360 ERYK---------TITKETSGVLKGEYGKTPAPVNTELQARVLAGAEAITCRPADL-----------IAA-EMPTL---- 414 (464)
T ss_dssp STTS---------SCCHHHHHHHTTTTCCCSSCCCHHHHHHHHTTCCCCCSCGGGS-----------SCC-CHHHH----
T ss_pred Cccc---------cCCHHHHHHhCCCCCCCCCCCCHHHHHHHhCCCCCCCCCcccc-----------CCc-CHHHH----
Confidence 6664 7999999999999999999999999999999999999999999 888 88887
Q ss_pred hHHHHHhHhhhcCCCCCCCchhcccccccccccCCccc---cccccCccchhhhhcCchhHHHHHHHhhccC
Q psy15244 1133 ATKKFMKFRDEFGPVDKLPTRIFFHALERKAEFDPIMA---CDCRENEPVKMNELIFPKATKKFMKFRDEFG 1201 (1427)
Q Consensus 1133 ~~~~~~~~~~~~g~~~~l~t~~f~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 1201 (1427)
++++.+.....| .++++ || +|+|+|||+++.+|++++++|-
T Consensus 415 -~~~~~~~~~~~~--------------------~~~~~~~~ed-------~l~~~~~p~~~~~~~~~~~~~~ 458 (464)
T 2nx9_A 415 -QDRVLQQAKEQH--------------------ITLAENAIDD-------VLTIALFDQVGWKFLANRHNLE 458 (464)
T ss_dssp -HHHHHHHHHHTT--------------------CCCCSSHHHH-------HHHHHHHHHHHHHHHHHC----
T ss_pred -HHHHHHHhcccc--------------------cccccccHHH-------HHHHHcCcHHHHHHHHhhcccc
Confidence 774333322222 23566 88 9999999999999999999874
No 5
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=100.00 E-value=2.7e-95 Score=887.03 Aligned_cols=444 Identities=29% Similarity=0.464 Sum_probs=409.6
Q ss_pred cccCCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCC
Q psy15244 653 VRKLKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPN 732 (1427)
Q Consensus 653 ~~~~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~ 732 (1427)
++++++|+|+|||||||+||+++++|+++||++|++.|++ +|+++||+|+|++|++++||++++||++++.+++.+|+
T Consensus 19 ~~~~~~V~I~DtTLRDG~Qs~~~~~~~tedKl~Ia~~L~~--~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~ 96 (539)
T 1rqb_A 19 VSEPREVGITELVLRDAHQSLMATRMAMEDMVGACADIDA--AGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPN 96 (539)
T ss_dssp CCCSEECEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHH--TTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTT
T ss_pred CCCCCceEEEECCCCchhccCCCCCCCHHHHHHHHHHHHH--cCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCC
Confidence 4566789999999999999998889999999999999999 79999999999999999999999999999999999999
Q ss_pred CceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCC
Q psy15244 733 IPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNP 812 (1427)
Q Consensus 733 ~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p 812 (1427)
+++|||+||.|.+||++||+|+++.|++++.++|+|+||||+++||++|++.+++++++.|. .+++++||+.
T Consensus 97 ~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~---~v~~~i~~~~----- 168 (539)
T 1rqb_A 97 SRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGK---HAQGTICYTI----- 168 (539)
T ss_dssp SCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTC---EEEEEEECCC-----
T ss_pred CEEEEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCC---eEEEEEEeee-----
Confidence 99999999999999999999999999999999999999999999999999999999999999 9999999882
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcC-CceEEEeecCCcchHHHHHHHHHHhcCC
Q psy15244 813 NKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYP-NILIHVHTHDMAGTGVATTLACVKAGAD 891 (1427)
Q Consensus 813 ~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~GlA~An~laAi~AGad 891 (1427)
.++|+++|++++++++.++|||+|+||||+|+++|.+++++|++|++++| +++|++|+|||+|+|+||+++|++|||+
T Consensus 169 -~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~ 247 (539)
T 1rqb_A 169 -SPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVD 247 (539)
T ss_dssp -STTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCS
T ss_pred -CCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCC
Confidence 23799999999999999999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred EEEeccccCCCCCCCCcHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHhCCCCCCCCcccccchhhhhHHHHHHHHHHh
Q psy15244 892 IVDVAADSMSGICSQPAMGTIVSCLENTDKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWRCGIDLHDVCDYSSYWRKV 971 (1427)
Q Consensus 892 ~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~~~f~~~~~~~~~~~~~~ 971 (1427)
+||+|++|||+|+||++||+|+++|+.+|+++++|+++|.++++++ .+.
T Consensus 248 ~VD~ti~g~GertGN~~lE~lv~~L~~~g~~tgidl~~L~~is~~v-------------------------------~~~ 296 (539)
T 1rqb_A 248 VVDTAISSMSLGPGHNPTESVAEMLEGTGYTTNLDYDRLHKIRDHF-------------------------------KAI 296 (539)
T ss_dssp EEEEBCGGGCSTTSBCBHHHHHHHTTTSSEECCCCHHHHHHHHHHH-------------------------------HHH
T ss_pred EEEEeccccCCCccChhHHHHHHHHHhcCCCchhhHHHHHHHHHHH-------------------------------HHH
Confidence 9999999999999999999999999999999999996666555554 445
Q ss_pred hhhcCCCCCCCCCcCcccEEEecCCCccHHHHHHHHHHCCC--CHHHHHHHHHHHHHHcCCCCccccchhhHHHHHHHHH
Q psy15244 972 RELYAPFECTDLKAASSEAYLYEIPGGQYTNLKFRTMSFGL--DFEDVKRAYRTANFLLGDIIKCTPSSKVVADLAIFMT 1049 (1427)
Q Consensus 972 ~~~Y~~f~~~~~~g~~~~v~~~~~pGg~~snl~~ql~~~gl--~~~ev~~~~~~v~~~lG~~~~vTP~sq~vg~~a~~~v 1049 (1427)
+..|.||. +.+. .++++|.|++||||+||+.+|++++|+ +|++|+++|++||+++||||+|||+||+||+||+|||
T Consensus 297 ~~~~~~~~-~~~~-~~~~v~~he~pGG~~Snl~~q~~~~G~~~~~~~v~~~~~~v~~~~G~~~~VTP~Sq~vg~~A~~~v 374 (539)
T 1rqb_A 297 RPKYKKFE-SKTL-VDTSIFKSQIPGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNV 374 (539)
T ss_dssp GGGGGGGC-CSCS-CCCTHHHHCCCHHHHHHHHHHHHTTSCCTTHHHHHHHHHHHHHHTTCCCCCTTHHHHHHHHHHHHH
T ss_pred hCCCcCCC-CCcc-CCCceEEecCCcchhhHHHHHHHHcCcHHHHHHHHHHHHHHHHHcCCCcccCchhhhHHHHHHHHH
Confidence 66677777 5555 678889999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HcCCChhhhhhccccccccHhHHHHhccccCCCCCCCCHhHHHHH---hCCCCCcccCCCCCCCccccccccCCCccccc
Q psy15244 1050 QEKLSYRDVMENADKIIFPKSVTEFFQGSIGEPYQGFPKKLQEKV---LDSLKDHALERKAEFDPIMACDYREDEPFKMN 1126 (1427)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~g~~~~~~~~~~~~~~---l~~~~~~~~rp~~~~~~~~~~~~~e~~~~d~~ 1126 (1427)
+.|. | .+||+||++|++|+||+||+|||++|+++| |++ +++++||+++ ++| ||+
T Consensus 375 ~~~~-~---------~~~~~~~~~~~~G~~G~~p~~~~~~~~~~~~~~l~~-~~~~~rp~~~-----------l~~-~~~ 431 (539)
T 1rqb_A 375 MMGE-Y---------KRMTGEFADIMLGYYGASPADRDPKVVKLAEEQSGK-KPITQRPADL-----------LPP-EWE 431 (539)
T ss_dssp HHCT-T---------SSCCHHHHHHHTTTTCCCSSCCCHHHHHHHHHHHCC-CCCCSCGGGG-----------CCC-CHH
T ss_pred hcCc-c---------ccCCHHHHHHhCcCCCCCCCCCCHHHHHHHHHHhCC-CCCCCCcccc-----------CCc-CHH
Confidence 9873 3 479999999999999999999999999999 998 8999999999 888 777
Q ss_pred cccChhhHHHHHhHhhhcCCCCCCCchhcccccccccccCCccccccccCccchhhhhcCchhHHHHHHHhh
Q psy15244 1127 KLIFPKATKKFMKFRDEFGPVDKLPTRIFFHALERKAEFDPIMACDCRENEPVKMNELIFPKATKKFMKFRD 1198 (1427)
Q Consensus 1127 ~~~~p~~~~~~~~~~~~~g~~~~l~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 1198 (1427)
++ ++++..+.++ + .++|| +|+|+|||+++.+|+++|+
T Consensus 432 ~~-----~~~~~~~~~~-~----------------------~~~ed-------~l~~~~~p~~~~~~~~~~~ 468 (539)
T 1rqb_A 432 KQ-----SKEAATLKGF-N----------------------GTDED-------VLTYALFPQVAPVFFEHRA 468 (539)
T ss_dssp HH-----HHHHTTSTTC-C----------------------SSHHH-------HHHHHHCTTTHHHHHHHGG
T ss_pred HH-----HHHHHHHhhh-c----------------------CCHHH-------HHHHHhCcHHHHHHHHhhh
Confidence 76 5510002211 1 47789 9999999999999999997
No 6
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=100.00 E-value=4e-83 Score=796.19 Aligned_cols=450 Identities=31% Similarity=0.516 Sum_probs=397.0
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHc---------CCEEEEEecCCC--ccCccccccceEEEcCCCCCcccCCCCHHHH
Q psy15244 54 PKTMEKILIANRSEVAIRVARACNEM---------GIKSVGIYSEQD--KFSAHRTKVDQAFLVGKGMPPVAAYLNIPEI 122 (1427)
Q Consensus 54 ~~~~kkVLIagrGeia~riiraa~el---------Gi~~vav~s~~d--~~s~~~~~aDe~~~i~~~~~~~~~yldi~~I 122 (1427)
.+||+||||+|||+||++++|+|+++ |+++|++|++.| ..+++.++||++++++ +....++|+|++.|
T Consensus 53 ~~~~~kvLIanrGeiA~riira~r~lG~e~f~~e~Gi~tVav~s~~D~~~~a~~~~~ADe~v~i~-~~~~~~syld~~~I 131 (587)
T 3jrx_A 53 DRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVP-GGPNNNNYANVELI 131 (587)
T ss_dssp CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECC-CSSGGGTTTCHHHH
T ss_pred CcccCEEEEECChHHHHHHHHHHHHhhhccccccCCceEEEEecccccCcCChhhHhCCEEEEeC-CCCccccccCHHHH
Confidence 47899999999999999999999987 899999999766 7899999999999998 55667899999999
Q ss_pred HHHHHhcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCcc-----------
Q psy15244 123 ICIAKNNNVDAIHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTT----------- 191 (1427)
Q Consensus 123 i~ia~~~~vDaI~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~----------- 191 (1427)
+++|++.++|+|||||||++||+.++++|++.|++|+||++++++.++||..+|++|+++|||+|++..
T Consensus 132 l~~a~~~~vdaV~pG~GflsEn~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~ak~ll~~aGVPvpp~~~~~l~~~~~~~~ 211 (587)
T 3jrx_A 132 VDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDD 211 (587)
T ss_dssp HHHHHHTTCSEEECCSSTTTTCTHHHHHHHTTTCEESSCCHHHHHHHCSHHHHHHHHHHTTCCBCCBTTTTCCCCC----
T ss_pred HHHHHHhCCCEEEeCCCccccCHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCeecccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred ----------------ccCCCHHHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEE
Q psy15244 192 ----------------EPVTDVDKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLV 255 (1427)
Q Consensus 192 ----------------~~v~s~eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlV 255 (1427)
..+.+.+++.++++++|||+||||+.|+||+||++|++.+||.++++.+.+++. ++.+||
T Consensus 212 ~~~~~~~~~~~~~~~~~~v~s~eea~~~a~~iGyPvVVKp~~GgGGkGv~iV~s~eEL~~a~~~a~~~~~----~~~vlV 287 (587)
T 3jrx_A 212 LQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIP----GSPIFL 287 (587)
T ss_dssp --CCCCCCCCHHHHHTTSCCSHHHHHHHHHHHCSSEEEEETTCCSSSSEEEECSTTTHHHHHHHHHHHST----TCCEEE
T ss_pred cccccccccchhhccccccCCHHHHHHHHHhcCCeEEEEeCCCCCCCCeEEeCCHHHHHHHHHHHHhhcc----CCCEEE
Confidence 127899999999999999999999999999999999999999999998876532 578999
Q ss_pred EeeccCCceEEEEEEecccccEEEeeeeccccccccceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEc
Q psy15244 256 EKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLD 335 (1427)
Q Consensus 256 EeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd 335 (1427)
|+||++++|++|++++|++|+++++++|+|++|++++|.++.+|++.++++.+++|.+.+.++++++||+|++++||+++
T Consensus 288 EeyI~g~rei~V~vl~D~~G~vv~l~~rd~siqrr~qk~ie~aPa~~l~~~~~~~i~~~A~~~a~alGy~G~~~VEfl~d 367 (587)
T 3jrx_A 288 MKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYLYS 367 (587)
T ss_dssp EECCCSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEC
T ss_pred EEecCCCcEEEEEEEEcCCCCEEEEeeeeccccccccceeEecCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEe
Confidence 99999779999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred CCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcCCCCcccc-----------------ccccC--cccceEEEEE
Q psy15244 336 KDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQGKSLTELG-----------------LCQEK--ITPQGCAIQC 396 (1427)
Q Consensus 336 ~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G~~l~~l~-----------------l~q~~--i~~~g~ai~~ 396 (1427)
++|++||||||||+|++|+++|+++|+|++++|+++++|++|++++ +.|++ +..+||||+|
T Consensus 368 ~dG~~yflEINpRl~~e~~vte~~tGvdlv~~~lria~G~pL~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~ghaie~ 447 (587)
T 3jrx_A 368 QDGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHVIAA 447 (587)
T ss_dssp SSSCEEEEEEESSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCSSSCSSCCCCCSEEEEE
T ss_pred CCCCEEEEEEeCCCCCccceeccccCCCHHHHHHHHHCCCCcccchhcccccccccccccccccccccccCCCCceEEEE
Confidence 8899999999999999999999999999999999999999997432 33333 6789999999
Q ss_pred EeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEEcCCHHHHHHHHHHHhhccEEcc-c
Q psy15244 397 HLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSG-V 475 (1427)
Q Consensus 397 ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~G-v 475 (1427)
|||||||.++|.|++|+|+.+.+|++++||...+....| .|++|||||+||||+||.||++|+++|.+||++++|+| +
T Consensus 448 Ri~aedp~~~f~p~~G~i~~~~~~~~~~v~~~~~~~~~~-~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~g~~ 526 (587)
T 3jrx_A 448 RITSENPDEGFKPSSGTVQELNFRSSKNVWGYFSVAATG-GLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDF 526 (587)
T ss_dssp EEEC----------CCCCEEEECSSCTTEEEEECCC-----------CCEEEEEEEESSHHHHHHHHHHHHHHHHHSSTT
T ss_pred eecccCccccCCCCCcEEEEEEeCCCCceEEeccccccC-CcCcccCcccceEEEEcCCHHHHHHHHHHHHhccEEeCCC
Confidence 999999999999999999999999999998654444444 59999999999999999999999999999999999999 8
Q ss_pred ccCHHHHHhhcCCcccccCCccccccccCc-chhhh
Q psy15244 476 TTNLPFLLNVFDDKKFLSGEALETNFIDDN-PQLLE 510 (1427)
Q Consensus 476 ~tni~~l~~~l~~~~f~~g~~~~t~~i~~~-~~l~~ 510 (1427)
+||++||++||.||+|++| +++|+||+++ .+++.
T Consensus 527 ~tn~~~~~~~~~~~~f~~g-~~~t~~~~~~~~~~~~ 561 (587)
T 3jrx_A 527 RTTVEYLINLLETESFQNN-DIDTGWLDYLIAEKVQ 561 (587)
T ss_dssp SSTTHHHHHHHTSHHHHTT-CSCCGGGGC-------
T ss_pred CCcHHHHHHHhCChhhccC-CcchhHHhHhhhhhcc
Confidence 9999999999999999999 9999999987 45554
No 7
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=100.00 E-value=1.3e-81 Score=780.88 Aligned_cols=445 Identities=31% Similarity=0.520 Sum_probs=372.2
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHc---------CCEEEEEecCCC--ccCccccccceEEEcCCCCCcccCCCCHHHH
Q psy15244 54 PKTMEKILIANRSEVAIRVARACNEM---------GIKSVGIYSEQD--KFSAHRTKVDQAFLVGKGMPPVAAYLNIPEI 122 (1427)
Q Consensus 54 ~~~~kkVLIagrGeia~riiraa~el---------Gi~~vav~s~~d--~~s~~~~~aDe~~~i~~~~~~~~~yldi~~I 122 (1427)
.+||+||||+|||+||++++|+|+++ |+++|++|++.| ..+++.++||++++++ +....++|+|++.|
T Consensus 37 ~~~~~kvLianrGeia~riira~r~lg~e~~~~e~gi~~Vav~s~~D~~~~a~~~~~ADe~~~i~-~~~~~~sy~d~~~i 115 (540)
T 3glk_A 37 DRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVP-GGPNNNNYANVELI 115 (540)
T ss_dssp SCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECC-CSSGGGTTTCHHHH
T ss_pred cccccEEEEECChHHHHHHHHHHHHhccccccccCCcEEEEEEcCcccCcCChhHHhCCEEEEeC-CCCcccccccHHHH
Confidence 47899999999999999999999987 899999999766 7799999999999998 55667899999999
Q ss_pred HHHHHhcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCcc-----------
Q psy15244 123 ICIAKNNNVDAIHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTT----------- 191 (1427)
Q Consensus 123 i~ia~~~~vDaI~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~----------- 191 (1427)
+++|++.++|+|||||||++|++.++++|++.|++|+||++++++.++||..+|++|+++|||+|++..
T Consensus 116 i~~a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~ll~~~GVPvp~~~~~~l~~~~~~~~ 195 (540)
T 3glk_A 116 VDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDD 195 (540)
T ss_dssp HHHHHHTTCSEEECCSSGGGGCTHHHHHHHHTTCEESSCCHHHHC---CHHHHHHHHHHTTCCBCCBTTTTCCCCCCCTT
T ss_pred HHHHHHhCCCEEEeCCCccccCHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCcccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred ----------------ccCCCHHHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEE
Q psy15244 192 ----------------EPVTDVDKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLV 255 (1427)
Q Consensus 192 ----------------~~v~s~eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlV 255 (1427)
..+.+.+++.++++++|||+||||+.|+||+||++|++.+||.++++.+.+++ .++.++|
T Consensus 196 ~~~~~~~~~~~~~~~~~~v~s~~ea~~~a~~igyPvVVKp~~ggGG~Gv~iv~~~~eL~~a~~~~~~~~----~~~~vlV 271 (540)
T 3glk_A 196 LQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEI----PGSPIFL 271 (540)
T ss_dssp C----CCCCCHHHHHHTSCCSHHHHHHHHHHHCSSEEEEETTCC----EEEECSTTTHHHHHHHHHHHS----TTCCEEE
T ss_pred cccccccccccccccccCcCCHHHHHHHHHhcCCcEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhhc----cCCCEEE
Confidence 12788999999999999999999999999999999999999999999887653 2578999
Q ss_pred EeeccCCceEEEEEEecccccEEEeeeeccccccccceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEc
Q psy15244 256 EKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLD 335 (1427)
Q Consensus 256 EeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd 335 (1427)
|+||++++|++|++++|++|+++++++|+|++|++++|.++.+|++.++++.+++|.+.+.++++++||+|++++||+++
T Consensus 272 Ee~I~g~rei~V~vl~d~~G~vv~l~~rd~s~qr~~~k~ie~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~VEf~~d 351 (540)
T 3glk_A 272 MKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYLYS 351 (540)
T ss_dssp EECCSSEEEEEEEEEECTTSCEEEEEEEEEEEC---CCSEEEESCTTSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEE
T ss_pred EEecCCCcEEEEEEEEcCCCCEEEEeceeeeeeecccceEEecCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEEEc
Confidence 99999779999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred CCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcCCCCcccc-----------------ccccC--cccceEEEEE
Q psy15244 336 KDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQGKSLTELG-----------------LCQEK--ITPQGCAIQC 396 (1427)
Q Consensus 336 ~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G~~l~~l~-----------------l~q~~--i~~~g~ai~~ 396 (1427)
++|++||||||||+|++|++++++||+|++++|+++++|++|++++ +.|.. +..+||||+|
T Consensus 352 ~dg~~~~lEiNpR~~~~~~vte~~tGvdl~~~~lr~a~G~pL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~aie~ 431 (540)
T 3glk_A 352 QDGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHVIAA 431 (540)
T ss_dssp TTSCEEEEEEECSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCSSCCSCCCSCCC----CCCSEEEEE
T ss_pred CCCCEEEEEEECCCCCcchhhHhHhCCCHHHHHHHHHCCCCcccccccccccccccccccccccccccccCCCceeEEEE
Confidence 8899999999999999999999999999999999999999997432 22332 6689999999
Q ss_pred EeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEEcCCHHHHHHHHHHHhhccEEcc-c
Q psy15244 397 HLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSG-V 475 (1427)
Q Consensus 397 ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~G-v 475 (1427)
|||||||.++|.|++|+|+.+.+|+++++|...+....| .|+++||||+||||+||+||++|++||.+||++++|+| +
T Consensus 432 ri~aedp~~~f~p~~G~i~~~~~~~~~~v~~~~~~~~~~-~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~g~~ 510 (540)
T 3glk_A 432 RITSENPDEGFKPSSGTVQELNFRSSKNVWGYFSVAATG-GLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDF 510 (540)
T ss_dssp EEC------------CCEEECCCSSCCSEEEEEEC-------------CEEEEEEEESSHHHHHHHHHHHHHHHTCC---
T ss_pred EEeccCCcccccCCceEEEEEEcCCCCcEEEEeccccCC-CCCCccCcccceEEEEcCCHHHHHHHHHHHHhccEEeccc
Confidence 999999999999999999999999999998754444444 58999999999999999999999999999999999999 8
Q ss_pred ccCHHHHHhhcCCcccccCCccccccccCc
Q psy15244 476 TTNLPFLLNVFDDKKFLSGEALETNFIDDN 505 (1427)
Q Consensus 476 ~tni~~l~~~l~~~~f~~g~~~~t~~i~~~ 505 (1427)
+||++||++||.||+|++| +++|+||+++
T Consensus 511 ~tn~~~~~~~~~~~~f~~~-~~~t~~~~~~ 539 (540)
T 3glk_A 511 RTTVEYLINLLETESFQNN-DIDTGWLDYL 539 (540)
T ss_dssp -HHHHHHHHHHHSHHHHHT-CC--------
T ss_pred CCcHHHHHHHhCChhhcCC-Cccchhhhhc
Confidence 9999999999999999999 9999999864
No 8
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=100.00 E-value=2e-80 Score=788.51 Aligned_cols=452 Identities=42% Similarity=0.722 Sum_probs=420.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 55 KTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
+||+||||+|||++|++++++|+++|++++++++++|..+.+.++||++++++ +..+..+|+|++.|+++|++.++|+|
T Consensus 26 ~m~~kILI~g~Geia~~iiraar~lGi~~vav~s~~d~~a~~~~~AD~~~~i~-~~~~~~syld~~~i~~~a~~~~~daI 104 (675)
T 3u9t_A 26 RSIQRLLVANRGEIACRVMRSARALGIGSVAVHSDIDRHARHVAEADIAVDLG-GAKPADSYLRGDRIIAAALASGAQAI 104 (675)
T ss_dssp CCCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHTCSEEEECC-CSSGGGTTTCHHHHHHHHHHTTCSEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCchhHhhCCEEEEcC-CCccccCccCHHHHHHHHHHhCcCEE
Confidence 47899999999999999999999999999999999999999999999999998 55667899999999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEe
Q psy15244 135 HPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILK 214 (1427)
Q Consensus 135 ~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVK 214 (1427)
||||||++||+.++++|++.|++|+||++++++.++||..+|++|+++|||+||++...+.+.+++.++++++|||+|||
T Consensus 105 ~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GVpvpp~~~~~~~s~~e~~~~a~~igyPvvvK 184 (675)
T 3u9t_A 105 HPGYGFLSENADFARACEEAGLLFLGPPAAAIDAMGSKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIGYPVLLK 184 (675)
T ss_dssp ECCSSTTTTCHHHHHHHHTTTCEESSCCHHHHHHHTSHHHHHHHHHHTTCCBCCCCCSCCCCTTHHHHHHHHSCSSBCCB
T ss_pred EeCCcccccCHHHHHHHHHcCCceeCCCHHHHHHhchHHHHHHHHHHcCcCcCCccccCCCCHHHHHHHHHhCCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999987555789999999999999999999
Q ss_pred ecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccceE
Q psy15244 215 AAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKV 294 (1427)
Q Consensus 215 P~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~ 294 (1427)
|..|+||+||++|++.+||.++++.+.+++..+|+++.+|+|+||++++|+++++++|++|+++++++|+|+++++|+++
T Consensus 185 p~~G~Gg~Gv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEeyI~g~reiev~v~~d~~G~vv~l~~rd~s~qr~~qk~ 264 (675)
T 3u9t_A 185 AAAGGGGKGMKVVEREAELAEALSSAQREAKAAFGDARMLVEKYLLKPRHVEIQVFADRHGHCLYLNERDCSIQRRHQKV 264 (675)
T ss_dssp CCC------CCCBCCTTTHHHHHSCCCC--------CCCBCCBCCSSCBCEEEEEEECSSSCEEEEEEEECCCBSSSSBC
T ss_pred ECCCCCCccEEEECCHHHHHHHHHHHHHHHHHhcCCCcEEEEeecCCCcEEEEEEEEcCCCCEEEEeccccceeeccceE
Confidence 99999999999999999999999988888888899999999999998899999999999999999999999999999999
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcC
Q psy15244 295 IQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQG 374 (1427)
Q Consensus 295 ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G 374 (1427)
++.+|++.++++.+++|.+.+.++++++||+|++|+||+++++|++||||||||+|++|+++|+++|+|++++++++++|
T Consensus 265 ie~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~dG~~~~iEiNpR~~~~~~~te~~tGvdl~~~~l~~a~G 344 (675)
T 3u9t_A 265 VEEAPAPGLGAELRRAMGEAAVRAAQAIGYVGAGTVEFLLDERGQFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVARG 344 (675)
T ss_dssp EEEESCSSCCHHHHHHHHHHHHHHHHHTTCCSEEEEECCBCTTSCBCBCEEESSCCTTHHHHHHTTTCCHHHHHHHHHTT
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEEEcCCCCEEEEeccccccCCchhhhhhcCCCHHHHHHHHHCC
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCC-CCCcccccCCCcCCCceecccCccceEEEEEEc
Q psy15244 375 KSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDP-ASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHT 453 (1427)
Q Consensus 375 ~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p-~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G 453 (1427)
++++ +.|.++..+||+++|||++|||.++|.|++|+|..++.| .++|||++ ..+++|+.|+++|||++||||++|
T Consensus 345 ~~l~---~~~~~~~~~g~ai~~ri~aedp~~~f~P~~G~l~~~~~p~~~~gvr~d-~~~~~G~~v~~~~ds~la~vi~~g 420 (675)
T 3u9t_A 345 EALP---LTQEQVPLNGHAIEVRLYAEDPEGDFLPASGRLMLYREAAAGPGRRVD-SGVREGDEVSPFYDPMLAKLIAWG 420 (675)
T ss_dssp CCCS---CCTTTCCCCSEEEEEEEESCCTTTTSCCCCCBCSEEECCCCCTTEEEE-ESCCTTCBCCTTSCCEEEEEEEEE
T ss_pred CCCC---CCccccccCcceeEEEEEeccCcccccCCCCEEEEEECCCCCCCEEEE-ecccCCCEeCCCCCCceEEEEEEe
Confidence 9875 567788899999999999999999999999999999999 78999999 457899999999999999999999
Q ss_pred CCHHHHHHHHHHHhhccEEcccccCHHHHHhhcCCcccccCCccccccccCc-chhhhcC
Q psy15244 454 ATYKSSCEKMRRALEETQVSGVTTNLPFLLNVFDDKKFLSGEALETNFIDDN-PQLLERN 512 (1427)
Q Consensus 454 ~~~~eA~~r~~raL~e~~I~Gv~tni~~l~~~l~~~~f~~g~~~~t~~i~~~-~~l~~~~ 512 (1427)
+|+++|+++|.++|++++|+|++||++||++||.||+|++| +++|+||+++ ++++...
T Consensus 421 ~~r~~a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~~~~~-~~~t~~~~~~~~~~~~~~ 479 (675)
T 3u9t_A 421 ETREEARQRLLAMLAETSVGGLRTNLAFLRRILGHPAFAAA-ELDTGFIARHQDDLLPAP 479 (675)
T ss_dssp SSHHHHHHHHHHHHHTCEEESSCCTHHHHHHHHTCHHHHTT-CCCTTHHHHTHHHHSCCC
T ss_pred CCHHHHHHHHHHHhhcEEEECccCCHHHHHHHhCCHHHhCC-CcccchhhhcchhhcCCC
Confidence 99999999999999999999999999999999999999999 9999999999 6677643
No 9
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=100.00 E-value=4.3e-81 Score=795.36 Aligned_cols=452 Identities=41% Similarity=0.730 Sum_probs=366.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 56 TMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
||+||||+|||++|++++++|+++|++++++|++.|..++|.++||++++++ +....++|+|++.|+++|+++++|+||
T Consensus 1 m~~kiLIanrGeia~riiraar~lGi~~vav~sd~d~~a~~~~~aD~~~~i~-p~~~~~syld~~~i~~~a~~~~~daI~ 79 (681)
T 3n6r_A 1 MFNKILIANRGEIACRVIKTARKMGISTVAIYSDADKQALHVQMADEAVHIG-PPPANQSYIVIDKVMAAIRATGAQAVH 79 (681)
T ss_dssp -CCCBCBSCCHHHHHHHHHHHGGGSCCBCCEECSTTSSCHHHHHSSCCEECS-SSSGGGTTSCHHHHHHHHHHTCCSCCB
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEEcCCCCCChhHHhCCEEEEcC-CCCcccCccCHHHHHHHHHHhCcCEEE
Confidence 6899999999999999999999999999999999999999999999999998 556678999999999999999999999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEee
Q psy15244 136 PGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKA 215 (1427)
Q Consensus 136 pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP 215 (1427)
|||||++|++.+++.|++.|++|+||++++++.++||..+|++|+++|||+||++...+.+.+++.++++++|||+||||
T Consensus 80 pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~dK~~~k~~l~~~GVPvpp~~~~~~~s~~e~~~~a~~igyPvVvKp 159 (681)
T 3n6r_A 80 PGYGFLSENSKFAEALEAEGVIFVGPPKGAIEAMGDKITSKKIAQEANVSTVPGYMGLIEDADEAVKISNQIGYPVMIKA 159 (681)
T ss_dssp CCSSSSTTCHHHHHHHHTTTCCCSSSCHHHHHHTTSHHHHHHHHHTTTCCCCCC--------------------------
T ss_pred ECCCccccCHHHHHHHHHcCCceECCCHHHHHHhCCHHHHHHHHHHcCcCcCCccccCcCCHHHHHHHHHhcCCcEEEEE
Confidence 99999999999999999999999999999999999999999999999999999864568899999999999999999999
Q ss_pred cCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccceEE
Q psy15244 216 AFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKVI 295 (1427)
Q Consensus 216 ~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~i 295 (1427)
..|+||+||++|++.+||.++++.+.+++...|+++.+++|+||++++|++|++++|++|+++++++|+|+++++|++.+
T Consensus 160 ~~ggggkGv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEe~I~g~rei~V~v~~d~~G~vv~l~~rd~s~qr~~~k~~ 239 (681)
T 3n6r_A 160 SAGGGGKGMRIAWNDQEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLCDSHGNGIYLGERECSIQRRNQKVV 239 (681)
T ss_dssp -------------------------------------------CCSCEEEEEEEECCSSSCCEEEEEEECCCEETTEECE
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCcEEEEEEEEeCCCCEEEEeeeecceeccCccEE
Confidence 99999999999999999999999999998889999999999999977999999999999999999999999999999999
Q ss_pred EEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcCC
Q psy15244 296 QIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQGK 375 (1427)
Q Consensus 296 e~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G~ 375 (1427)
+.+|++.++++.+++|.+.+.++++++||+|++|+||+++++|++||||||||+|++|+++|+++|+|++++++++++|+
T Consensus 240 e~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~d~dg~~~~lEiNpR~~~~~~~te~~tGvdl~~~~l~~a~G~ 319 (681)
T 3n6r_A 240 EEAPSPFLDEATRRAMGEQAVALAKAVGYASAGTVEFIVDGQKNFYFLEMNTRLQVEHPVTELITGVDLVEQMIRVAAGE 319 (681)
T ss_dssp EEESCSSCCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEECTTSCCCCCEEECSCCTTHHHHHHHHTCCHHHHHHHHHTSC
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEeCCCCEEEEecccccCCCcHHhHHHhCCCHHHHHHHHHCCC
Confidence 99999889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCC-C-------------------CcccccCCCcCCC
Q psy15244 376 SLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPA-S-------------------IGIRVDSSCPYPG 435 (1427)
Q Consensus 376 ~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~-~-------------------~gvr~d~~~~~~G 435 (1427)
+++ +.|+++..+||+++||+|+|||.++|.|++|+|..+++|. + +|||+|+ .+++|
T Consensus 320 ~l~---~~~~~~~~~g~ai~~ri~aedp~~~f~p~~G~i~~~~~p~~~~~~~~~~~~~w~~d~~~~~~~vr~d~-~~~~g 395 (681)
T 3n6r_A 320 PLS---ITQGDVKLTGWAIENRLYAEDPYRGFLPSIGRLTRYRPPAETAAGPLLVNGKWQGDAPSGEAAVRNDT-GVYEG 395 (681)
T ss_dssp CCS---SCTTTCCCCSEEEEEEEESEEGGGTTEECCEECSCEECCCC--------------------CCEEEEE-SCCTT
T ss_pred CCC---CCccccceeEEEEEEEEecCCcccccCCCCcEEEEEECCCCCcccccccccccccccccCCCcEEEEc-cccCC
Confidence 875 5688889999999999999999999999999999999987 4 4899995 47899
Q ss_pred ceecccCccceEEEEEEcCCHHHHHHHHHHHhhccEEcccccCHHHHHhhcCCcccccCCccccccccCc-chhhhcCC
Q psy15244 436 LQISPDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSGVTTNLPFLLNVFDDKKFLSGEALETNFIDDN-PQLLERNS 513 (1427)
Q Consensus 436 ~~I~~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv~tni~~l~~~l~~~~f~~g~~~~t~~i~~~-~~l~~~~~ 513 (1427)
+.|+++||||+||||+||+||++|+++|.+||++++|+|++||++||+++|.||+|++| +++|+||+++ +++|....
T Consensus 396 ~~v~~~yd~~iak~i~~g~~r~~a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~-~~~t~~~~~~~~~~~~~~~ 473 (681)
T 3n6r_A 396 GEISMYYDPMIAKLCTWAPTRAAAIEAMRIALDSFEVEGIGHNLPFLSAVMDHPKFISG-DMTTAFIAEEYPEGFEGVN 473 (681)
T ss_dssp CEECTTSCCEEEEEEEEESSHHHHHHHHHHHHHHCEECSSCCSHHHHHHHHHCHHHHHC-CCCSSHHHHHCTTSCCCCC
T ss_pred CccCCCCCCceeEEEEEcCCHHHHHHHHHHHHhcCEEECccCCHHHHHHHhCCHhhccC-CcccchhhhccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999 9999999998 78887643
No 10
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=100.00 E-value=2.6e-76 Score=722.75 Aligned_cols=445 Identities=41% Similarity=0.740 Sum_probs=424.9
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCC
Q psy15244 53 PPKTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVD 132 (1427)
Q Consensus 53 ~~~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vD 132 (1427)
|.+||+||||+|+|+++++++++|+++|+++++++++++..+++.++||+.++++ +....++|+|.+.|+++|+++++|
T Consensus 2 n~m~~~kiLI~g~g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~~~ad~~~~i~-~~~~~~~~~d~~~l~~~~~~~~~d 80 (446)
T 3ouz_A 2 NAMEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLKYADASICIG-KARSSESYLNIPAIIAAAEIAEAD 80 (446)
T ss_dssp CTTCCCEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHHHHSSEEEEEE-CCTTTTGGGCHHHHHHHHHHHTCS
T ss_pred CccccceEEEECCCHHHHHHHHHHHHcCCEEEEEEcCcccccchHhhCCEEEEcC-CCCccccccCHHHHHHHHHHhCcC
Confidence 4467999999999999999999999999999999999998899999999999987 455667899999999999999999
Q ss_pred EEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEE
Q psy15244 133 AIHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVI 212 (1427)
Q Consensus 133 aI~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvV 212 (1427)
+|||+|||++|+..+++.|++.|++++||++++++.++||..+|++|+++|||+|++....+.+.+++.++++++|||+|
T Consensus 81 ~i~p~~g~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~~~~~~~e~~~~~~~~g~Pvv 160 (446)
T 3ouz_A 81 AIFPGYGFLSENQNFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVI 160 (446)
T ss_dssp EEECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSSCCSHHHHHHHHHHHCSSEE
T ss_pred EEEECCcccccCHHHHHHHHHCCCceECcCHHHHHHhCCHHHHHHHHHHcCCCcCCCcccCCCCHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999863357999999999999999999
Q ss_pred EeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccc
Q psy15244 213 LKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQ 292 (1427)
Q Consensus 213 VKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~q 292 (1427)
|||..|+||+||++|++.+||.++++.+.+++...|+++.+++|+||++++|+++++++|++|+++++++++|+++++++
T Consensus 161 vKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~d~~g~~~~~~~~~~~~~~~~~ 240 (446)
T 3ouz_A 161 LKAAAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDSFGNVIHVGERDCSMQRRHQ 240 (446)
T ss_dssp EEETTCCTTCSEEEECSGGGHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTE
T ss_pred EEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCCcEEEEEEEEcCCCCEEEEeeceeeeeecCc
Confidence 99999999999999999999999999999998888999999999999977999999999999999999999999999999
Q ss_pred eEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHH
Q psy15244 293 KVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIA 372 (1427)
Q Consensus 293 k~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA 372 (1427)
+.++.+|++.++++.++++.+.+.++++++||+|++|+||+++++|++||||||||++++|+++++++|+|+++++++++
T Consensus 241 ~~~~~~p~~~l~~~~~~~l~~~a~~~~~~lg~~G~~~ve~~~~~~g~~~~iEiNpR~~g~~~~~~~~~G~dl~~~~~~~~ 320 (446)
T 3ouz_A 241 KLIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFEFLVDKNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVA 320 (446)
T ss_dssp EEEEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESSCCTTHHHHHHHHCCCHHHHHHHHH
T ss_pred eEEEECCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEEEeCCCCEEEEEeECCCCCcceeeeeeeCCCHHHHHHHHH
Confidence 99999999889999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred cCCCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEE
Q psy15244 373 QGKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVH 452 (1427)
Q Consensus 373 ~G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~ 452 (1427)
+|++++ .+.++..+||+++||+++|+| ..|.|++|++..+++|+++++|++ ..+++|+.|+++|||++|+|+++
T Consensus 321 ~G~~l~----~~~~~~~~g~ai~~ri~ae~~-~~~~p~~G~i~~~~~p~~~~vr~~-~~~~~G~~v~~~~d~~~~~vi~~ 394 (446)
T 3ouz_A 321 EGYALP----SQESIKLNGHSIECRITAEDS-KTFLPSPGKITKYIPPAGRNVRME-SHCYQDYSVPAYYDSMIGKLVVW 394 (446)
T ss_dssp TTCCCC----CGGGCCCCSEEEEEEEESBCT-TTCCBCCEECSEEECCCSTTEEEE-ECCCTTCEECTTTCCEEEEEEEE
T ss_pred CCCCCC----cCCCCCcceEEEEEEeeccCC-CccCCCCcEEeEEecCCCCCEEEE-cccccCCEeCCccCCcceEEEEE
Confidence 999885 356678899999999999999 899999999999999999999999 45789999999999999999999
Q ss_pred cCCHHHHHHHHHHHhhccEEcccccCHHHHHhhcCCcccccCCccccccccCc
Q psy15244 453 TATYKSSCEKMRRALEETQVSGVTTNLPFLLNVFDDKKFLSGEALETNFIDDN 505 (1427)
Q Consensus 453 G~~~~eA~~r~~raL~e~~I~Gv~tni~~l~~~l~~~~f~~g~~~~t~~i~~~ 505 (1427)
|+|+++|++++.++|++++|+|++||++||+++|.||+|++| +++|+||++|
T Consensus 395 g~~~~~a~~~~~~al~~~~i~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 446 (446)
T 3ouz_A 395 AEDRNKAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINN-NYDTNYLARH 446 (446)
T ss_dssp ESSHHHHHHHHHHHHHHCEEESSCCTHHHHHHHHTCHHHHTT-CCCTTHHHHC
T ss_pred cCCHHHHHHHHHHHHhhCEEeCccCCHHHHHHHhCChhhccC-CccccccccC
Confidence 999999999999999999999999999999999999999999 9999999864
No 11
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=100.00 E-value=5.7e-72 Score=742.71 Aligned_cols=445 Identities=39% Similarity=0.686 Sum_probs=355.9
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCC
Q psy15244 52 PPPKTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNV 131 (1427)
Q Consensus 52 ~~~~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~v 131 (1427)
+.++||+||||+|||++|++++++|+++|++++++++++|..+++.++||++++++ +....++|+|.+.|+++|+++++
T Consensus 26 ~~~~m~kkILI~grGeia~~iiraar~lGi~vVaV~s~~d~~a~~~~~ADe~~~i~-p~~~~~syld~~~Il~~a~~~~i 104 (1236)
T 3va7_A 26 QKKKPFETVLIANRGEIAVRIMKTLKRMGIKSVAVYSDPDKYSQHVTDADFSVALH-GRTAAETYLDIDKIINAAKKTGA 104 (1236)
T ss_dssp --CCSCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHHSSEEEECC-CSSTTTTTTCHHHHHHHHHHTTC
T ss_pred CccCCCCEEEEEcCCHHHHHHHHHHHHCCCEEEEEEcCCCcCchhhhhCCEEEEeC-CCcccccccCHHHHHHHHHHhCC
Confidence 44578999999999999999999999999999999999999999999999999997 44566889999999999999999
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcE
Q psy15244 132 DAIHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPV 211 (1427)
Q Consensus 132 DaI~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPv 211 (1427)
|+|||||||++|+..+++.|++.|++|+||++++++.++||..+|++|+++|||+||++ ..+.+.+++.++++++|||+
T Consensus 105 DaI~pg~g~lsEn~~~a~~le~~Gi~~iGps~eai~~~~DK~~ak~ll~~aGIPvpp~~-~~v~s~eea~~~a~~iGyPv 183 (1236)
T 3va7_A 105 QAIIPGYGFLSENADFSDRCSQENIVFVGPSGDAIRKLGLKHSAREIAERAKVPLVPGS-GLIKDAKEAKEVAKKLEYPV 183 (1236)
T ss_dssp SEEECCSSGGGGCHHHHHHHHTTTCEESSCCHHHHHHHHSTTHHHHHHHHTTCCCCC-----------------------
T ss_pred CEEEECCccccccHHHHHHHHHCCCCeeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCee-EecCCHHHHHHHHHHcCCCE
Confidence 99999999999999999999999999999999999999999999999999999999975 46889999999999999999
Q ss_pred EEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeecccccccc
Q psy15244 212 ILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRY 291 (1427)
Q Consensus 212 VVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~ 291 (1427)
||||..|+||+||++|++.+||.++++.+.+++...|++..++|||||++++|++|++++|++|++++++++||++++++
T Consensus 184 VVKP~~GgGGkGV~iv~s~eEL~~a~~~~~~~a~~~~~~~~vlVEeyI~G~rEisV~vl~Dg~g~vv~l~~rd~s~qr~~ 263 (1236)
T 3va7_A 184 MVKSTAGGGGIGLQKVDSEDDIERVFETVQHQGKSYFGDAGVFMERFVNNARHVEIQMMGDGFGKAIAIGERDCSLQRRN 263 (1236)
T ss_dssp -------------------------------------------------CCEEEEEEEEEESSSCEEEEEEEEEEEEETT
T ss_pred EEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhccCCCcEEEeeccCCCeEEEEEEEecCCceEEEEeeeeeeeeecC
Confidence 99999999999999999999999999999888888888999999999997799999999999999999999999999999
Q ss_pred ceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCC-CcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHH
Q psy15244 292 QKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKD-DNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIK 370 (1427)
Q Consensus 292 qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~d-G~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~ 370 (1427)
+++++.+|++.++++.+++|.+.+.++++++||+|++++||+++++ |++||||||||+|++|+++++++|+|+++++++
T Consensus 264 ~k~~e~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~VEfivd~d~g~~y~iEINpRl~g~~~~te~vtGvDlv~~~l~ 343 (1236)
T 3va7_A 264 QKVIEETPAPNLPEATRAKMRAASERLGSLLKYKCAGTVEFIYDEQRDEFYFLEVNARLQVEHPITEMVTGLDLVEWMLR 343 (1236)
T ss_dssp EEEEEEESCSSCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHH
T ss_pred cceEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCCCcEEEEEEECCCCCccHHHHHHHCCCHHHHHHH
Confidence 9999999998899999999999999999999999999999999974 889999999999999999999999999999999
Q ss_pred HHcCCCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEE
Q psy15244 371 IAQGKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKII 450 (1427)
Q Consensus 371 iA~G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi 450 (1427)
+++|++++ +.+..+..+|||++||+|+|||.++|.|++|++..+..|.+ +|++ .+++.|+.|+++|||++|+|+
T Consensus 344 ~a~G~~l~---~~~~~~~~~g~Ai~~riyaedp~~~f~p~~G~i~~~~~p~g--vrvd-~~v~~G~~V~~~yds~la~vi 417 (1236)
T 3va7_A 344 IAANDSPD---FDNTKIEVSGASIEARLYAENPVKDFRPSPGQLTSVSFPSW--ARVD-TWVKKGTNVSAEYDPTLAKII 417 (1236)
T ss_dssp HHTTCCCC---GGGCCCCCCSEEEEEEEESEETTTTTEECCEECCEEECCTT--SEEE-ECCCTTCEECSSSCCEEEEEE
T ss_pred HHCCCCCC---CccccccccceEEEEEEecCCcccccCCCCceEEEEEcCCc--cEec-ccccCCCEeCCCCCCceEEEE
Confidence 99999874 45666778999999999999999999999999999998865 8888 457899999999999999999
Q ss_pred EEcCCHHHHHHHHHHHhhccEEcccccCHHHHHhhcCCcccccCCccccccccCc
Q psy15244 451 VHTATYKSSCEKMRRALEETQVSGVTTNLPFLLNVFDDKKFLSGEALETNFIDDN 505 (1427)
Q Consensus 451 ~~G~~~~eA~~r~~raL~e~~I~Gv~tni~~l~~~l~~~~f~~g~~~~t~~i~~~ 505 (1427)
++|+|+++|+++|+++|++++|+|++|||+||+++|.||+|++| +++|+||+++
T Consensus 418 ~~g~~r~eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~-~~~t~~~~~~ 471 (1236)
T 3va7_A 418 VHGKDRNDAIMKLNQALNETAVYGCITNIDYLRSIASSKMFKEA-KVATKVLDSF 471 (1236)
T ss_dssp EEESSHHHHHHHHHHHHHTCEEESSCCSHHHHHHHHHCHHHHHT-CCCTTGGGGC
T ss_pred EEeCCHHHHHHHHHHHhhCEEEeCcccCHHHHHHHhCCHHHhCC-CCcchhhhhc
Confidence 99999999999999999999999999999999999999999999 9999999986
No 12
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=100.00 E-value=1.9e-68 Score=655.87 Aligned_cols=454 Identities=53% Similarity=0.880 Sum_probs=423.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 55 KTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
+||+||||+|+|+++++++++|+++|+++++++++++..+++.+++|+.+.++.+..+..+|.|.+.|+++|+++++|+|
T Consensus 4 ~~~k~ILI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~y~d~~~l~~~~~~~~id~v 83 (461)
T 2dzd_A 4 RRIRKVLVANRGEIAIRVFRACTELGIRTVAIYSKEDVGSYHRYKADEAYLVGEGKKPIEAYLDIEGIIEIAKAHDVDAI 83 (461)
T ss_dssp CCCSEEEECSCHHHHHHHHHHHHHHTCEEEEEECGGGTTCTHHHHSSSEEECSTTSCTTGGGTCHHHHHHHHHHTTCCEE
T ss_pred CcCcEEEEECCcHHHHHHHHHHHHcCCEEEEEECCcccccchhhhCCEEEEcCCCCCccccccCHHHHHHHHHHhCCCEE
Confidence 56899999999999999999999999999999998888788999999999987544566789999999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEe
Q psy15244 135 HPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILK 214 (1427)
Q Consensus 135 ~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVK 214 (1427)
+|++|+++|++.+++.|++.|++++||++++++.++||..+|++|+++|||+|++....+.+.+++.++++++|||+|||
T Consensus 84 ~~~~g~~~E~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvK 163 (461)
T 2dzd_A 84 HPGYGFLSENIQFAKRCREEGIIFIGPNENHLDMFGDKVKARHAAVNAGIPVIPGSDGPVDGLEDVVAFAEAHGYPIIIK 163 (461)
T ss_dssp ECCSSSSTTCHHHHHHHHHTTCEESSCCHHHHHHTTSHHHHHHHHHHTTCCBCCBCSSCCSSHHHHHHHHHHHCSCEEEE
T ss_pred EECCCccccCHHHHHHHHHcCCEEECCCHHHHHHhhCHHHHHHHHHHcCCCCCCCcccCcCCHHHHHHHHHhcCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999985225789999999999999999999
Q ss_pred ecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccceE
Q psy15244 215 AAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKV 294 (1427)
Q Consensus 215 P~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~ 294 (1427)
|..|+||+||++|++.+|+.++++.+.+++...|++..+++|+||++++|+++++++|++|+++++++++|+.++++++.
T Consensus 164 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~ 243 (461)
T 2dzd_A 164 AALGGGGRGMRIVRSKSEVKEAFERAKSEAKAAFGSDEVYVEKLIENPKHIEVQILGDYEGNIVHLYERDCSVQRRHQKV 243 (461)
T ss_dssp ESTTCSSSSEEEECCGGGHHHHHHHHHHHHHHHTSCCCEEEEECCCSCEEEEEEEEECTTCCEEEEEEEEEEEEETTEEE
T ss_pred eCCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEECCCCCeEEEEEEEEcCCCCEEEEEeccccccccccce
Confidence 99999999999999999999999998887777788899999999997799999999998899999999999999999999
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcC
Q psy15244 295 IQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQG 374 (1427)
Q Consensus 295 ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G 374 (1427)
.+.+|++.++++.++++.+.+.++++++||.|.+++||++++ |++||||||||+|++++++++++|+|++++++++++|
T Consensus 244 ~~~~P~~~l~~~~~~~i~~~a~~~~~~lg~~g~~~ve~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G 322 (461)
T 2dzd_A 244 VEVAPSVSLSDELRQRICEAAVQLMRSVGYVNAGTVEFLVSG-DEFYFIEVNPRIQVEHTITEMITGIDIVQSQILIADG 322 (461)
T ss_dssp EEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEET-TEEEEEEEESSCCGGGHHHHHHHCCCHHHHHHHHHTT
T ss_pred EEECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEeC-CCEEEEEEECCCCCceeeEEeecCCCHHHHHHHHHcC
Confidence 999999889999999999999999999999999999999998 7799999999999999999999999999999999999
Q ss_pred CCCcccc--c-cccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEE
Q psy15244 375 KSLTELG--L-CQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIV 451 (1427)
Q Consensus 375 ~~l~~l~--l-~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~ 451 (1427)
+++++.. + .+..+..+|+++++|+++++|..+|.|..|.+..++.|+++++|++......|+.|+++|||++++|++
T Consensus 323 ~~l~~~~~~~~~~~~~~~~g~~~~~ri~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~~~~~~~G~~i~~~~~~~~~~v~~ 402 (461)
T 2dzd_A 323 CSLHSHEVGIPKQEDIRINGYAIQSRVTTEDPLNNFMPDTGKIMAYRSGGGFGVRLDAGNGFQGAVITPYYDSLLVKLST 402 (461)
T ss_dssp CCTTSTTTCCCCGGGCCCCSEEEEEEEESEEGGGTTEECCEECSEEECCCCTTEEEEESSCSTTCEECSSSCCEEEEEEE
T ss_pred CCccccccccccccccccceeEEEeeecccCCccCccCCCCeeeEEecCCCCCeEeecccccCCCCcCcccchhhheeEE
Confidence 9987542 2 233467789999999999999888999999999999998899999855568999999999999999999
Q ss_pred EcCCHHHHHHHHHHHhhccEEcccccCHHHHHhhcCCcccccCCccccccccCcchhhh
Q psy15244 452 HTATYKSSCEKMRRALEETQVSGVTTNLPFLLNVFDDKKFLSGEALETNFIDDNPQLLE 510 (1427)
Q Consensus 452 ~G~~~~eA~~r~~raL~e~~I~Gv~tni~~l~~~l~~~~f~~g~~~~t~~i~~~~~l~~ 510 (1427)
+|+|+++|++++++++++++|+|++|||+|+.+++.||+|++| +++|+||+++++||.
T Consensus 403 ~g~~~~~a~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 460 (461)
T 2dzd_A 403 WALTFEQAARKMLRNLREFRIRGIKTNIPFLENVVQHPKFLSG-EYDTSFIDTTPELFV 460 (461)
T ss_dssp EESSHHHHHHHHHHHHHTCEEESSCCSHHHHHHHHHSHHHHTS-CCCTTHHHHCGGGGC
T ss_pred EcCCHHHHHHHHHHHHHhcEEeCCcCCHHHHHHHhCChhhhCC-Cccchhhhcchhhhc
Confidence 9999999999999999999999999999999999999999999 999999999988875
No 13
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=1.6e-66 Score=636.90 Aligned_cols=450 Identities=44% Similarity=0.816 Sum_probs=417.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 56 TMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
|++||||+|+|+++++++++|+++|+++++++++++..+++.+++|+.+.++ +. ...+|.|.+.|+++|+++++|+|+
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~-p~-~~~~~~d~~~l~~~~~~~~~d~v~ 78 (451)
T 1ulz_A 1 MVNKVLVANRGEIAVRIIRACKELGIPTVAIYNEVESTARHVKLADEAYMIG-TD-PLDTYLNKQRIINLALEVGADAIH 78 (451)
T ss_dssp CCSSEEECCCHHHHHHHHHHHHHHTCCEEEEECGGGTTCHHHHHSSEEEECC-SS-TTHHHHCHHHHHHHHHHTTCCEEE
T ss_pred CCceEEEECCcHHHHHHHHHHHHcCCeEEEEechhhcccchhhhCcEEEEcC-CC-cccccCCHHHHHHHHHHcCCCEEE
Confidence 5889999999999999999999999999999988887788899999999886 22 456788999999999999999999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEee
Q psy15244 136 PGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKA 215 (1427)
Q Consensus 136 pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP 215 (1427)
|++|+++|++.+++.|++.|++++||++++++.++||..+|++|+++|||+|++....+.+.+++.++++++|||+||||
T Consensus 79 ~~~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp 158 (451)
T 1ulz_A 79 PGYGFLAENAEFAKMCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSLEEAKALAREIGYPVLLKA 158 (451)
T ss_dssp CCSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSSCCCHHHHHHHHHHHCSSEEEEE
T ss_pred ECCCccccCHHHHHHHHHCCCeEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHcCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999852257899999999999999999999
Q ss_pred cCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccceEE
Q psy15244 216 AFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKVI 295 (1427)
Q Consensus 216 ~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~i 295 (1427)
..|+||+||++|++.+|+.++++.+..++...|++..+++|+||++++|++++++++++|+++++.+|+|+.++++++..
T Consensus 159 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~ 238 (451)
T 1ulz_A 159 TAGGGGRGIRICRNEEELVKNYEQASREAEKAFGRGDLLLEKFIENPKHIEYQVLGDKHGNVIHLGERDCSIQRRNQKLV 238 (451)
T ss_dssp CSSSSCCSCEEESSHHHHHHHHHHHHHHHHHTTSCCCEEEEECCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEE
T ss_pred CCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCeEEEEEEEEcCCCCEEEEeeeecccccccccce
Confidence 99999999999999999999999988877778888899999999977999999999988999999999999999999999
Q ss_pred EEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcCC
Q psy15244 296 QIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQGK 375 (1427)
Q Consensus 296 e~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G~ 375 (1427)
+.+|++.++++..+++.+.+.++++++||.|++++||+++++|++||||||||+++++++++.++|+|++++++++++|.
T Consensus 239 ~~~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~ 318 (451)
T 1ulz_A 239 EIAPSLILTPEKREYYGNIVTKAAKEIGYYNAGTMEFIADQEGNLYFIEMNTRIQVEHPVSEMVTGIDIVKWQIKIAAGE 318 (451)
T ss_dssp EEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTC
T ss_pred eECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEeCCCCEEEEEeeCCCCccchHHHHHhCCCHHHHHHHHHcCC
Confidence 99999779999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred CCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEEcCC
Q psy15244 376 SLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHTAT 455 (1427)
Q Consensus 376 ~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G~~ 455 (1427)
+++ +.+..+...++++++|+++++|...|.|..|++..+..|.+++++++ .+.+.|..+.+++|+++|+|+++|+|
T Consensus 319 ~l~---~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~-~~~~~g~~~~~~~~~~~g~v~~~g~~ 394 (451)
T 1ulz_A 319 PLT---IKQEDVKFNGYAIECRINAEDPKKNFAPSTRVIERYYVPGGFGIRVE-HAAARGFEVTPYYDSMIAKLITWAPT 394 (451)
T ss_dssp CCC---CCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCCSEECCCSTTEEEE-ECCCTTCBCCSSSCCEEEEEEEEESS
T ss_pred CCC---CccccCCCceEEEEEeccccCcccCcCCCCceeceEECCCCCCcccc-cCccCCCEecccccchheEEEEECCC
Confidence 875 23444566789999999999998889999999998888887888877 44689999999999999999999999
Q ss_pred HHHHHHHHHHHhhccEEcccccCHHHHHhhcCCcccccCCccccccccCcchhhhcC
Q psy15244 456 YKSSCEKMRRALEETQVSGVTTNLPFLLNVFDDKKFLSGEALETNFIDDNPQLLERN 512 (1427)
Q Consensus 456 ~~eA~~r~~raL~e~~I~Gv~tni~~l~~~l~~~~f~~g~~~~t~~i~~~~~l~~~~ 512 (1427)
+++|++++++++++++++|++|||+||+++|.||+|++| +++|+||++++++|++.
T Consensus 395 ~~ea~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 450 (451)
T 1ulz_A 395 WDEAVERMRAALETYEITGVKTTIPLLINIMKEKDFKAG-KFTTKYLEEHPEVFEYE 450 (451)
T ss_dssp HHHHHHHHHHHHHTCEECSSCCSHHHHHHHHHCHHHHHT-CCCTTTTTTCGGGGCCC
T ss_pred HHHHHHHHHHHHhhcEEeCccCCHHHHHHHhCCHHHhcC-CCcchhhhhhHhhcccC
Confidence 999999999999999999999999999999999999999 99999999998888763
No 14
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=100.00 E-value=7.1e-66 Score=631.22 Aligned_cols=443 Identities=42% Similarity=0.784 Sum_probs=412.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEe
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHP 136 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~p 136 (1427)
|+||||+|+|+++++++++|+++|+++++++++.+..+++.+++|+.+.++ +.....+|.|.+.|+++|+++++|+|+|
T Consensus 1 ~k~ilI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~-~~~~~~~~~d~~~l~~~~~~~~~d~v~~ 79 (451)
T 2vpq_A 1 MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVG-PTLSKDSYLNIPNILSIATSTGCDGVHP 79 (451)
T ss_dssp -CEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCHHHHHSSEEEEEE-CSSGGGTTTCHHHHHHHHHHTTCSEEEC
T ss_pred CceEEEeCCCHHHHHHHHHHHHcCCEEEEEecccccccchhhhCCEEEEcC-CCCccccccCHHHHHHHHHHcCCCEEEE
Confidence 579999999999999999999999999999988887788889999999986 4445578999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeec
Q psy15244 137 GYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAA 216 (1427)
Q Consensus 137 g~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~ 216 (1427)
++|+++|++.+++.+++.|++++||++++++.++||..+|++|+++|||+|+++...+.+.+++.++++++|||+||||.
T Consensus 80 ~~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~ 159 (451)
T 2vpq_A 80 GYGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKAT 159 (451)
T ss_dssp CSSTTTTCHHHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHHHCSSEEEEET
T ss_pred CCCccccCHHHHHHHHHcCCeEECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccCcCCHHHHHHHHHhcCCcEEEEEC
Confidence 99999999999999999999999999999999999999999999999999997523578999999999999999999999
Q ss_pred CCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccceEEE
Q psy15244 217 FGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKVIQ 296 (1427)
Q Consensus 217 ~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~ie 296 (1427)
.|+||+||++|++.+|+.++++.+.+++...|++..+++|+||++++|++++++++++|+++++.+++|+.+++|++..+
T Consensus 160 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~~ 239 (451)
T 2vpq_A 160 AGGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVE 239 (451)
T ss_dssp TCCTTCSEEEESSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCCSEEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEE
T ss_pred CCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEecCCCeEEEEEEEEcCCCCEEEEeccccchhccccceEE
Confidence 99999999999999999999999887777778889999999999769999999999889999999999999999999999
Q ss_pred EccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEc-CCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcCC
Q psy15244 297 IAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLD-KDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQGK 375 (1427)
Q Consensus 297 ~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd-~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G~ 375 (1427)
.+|++.++++.++++.+.+.++++++||.|++++||+++ ++|++||||||||+++++++++.++|+|++++++++++|.
T Consensus 240 ~~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~ 319 (451)
T 2vpq_A 240 EAPSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLNDNKFYFMEMNTRIQVEHPVTEMVTGIDLVKLQLQVAMGD 319 (451)
T ss_dssp EESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTC
T ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCCCCEEEEEeeCCCCCceehhhHHhCCCHHHHHHHHHCCC
Confidence 999977999999999999999999999999999999999 7899999999999999999999999999999999999999
Q ss_pred CCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEEcCC
Q psy15244 376 SLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHTAT 455 (1427)
Q Consensus 376 ~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G~~ 455 (1427)
+++ +.+.++..+++++.||+++++|...|.|.+|++..+..|.+++++++ .+.+.|..+++.+++++|+|+++|+|
T Consensus 320 ~~~---~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~-~~~~~g~~~~~~~~~~~g~v~~~g~~ 395 (451)
T 2vpq_A 320 VLP---YKQEDIKLTGHAIEFRINAENPYKNFMPSPGKIEQYLAPGGYGVRIE-SACYTNYTIPPYYDSMVAKLIIHEPT 395 (451)
T ss_dssp CCS---CCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCSEEECCCSTTEEEE-CCCCTTCBCCTTTCCEEEEEEEEESS
T ss_pred CCC---CcccccCcCceEeeeEeeeeccccccCCCCCEEeEEECCCCCCcccc-cccccCCccCcccccccEEEEEEeCC
Confidence 875 23445667899999999999998889999999998888877888887 45688999999999999999999999
Q ss_pred HHHHHHHHHHHhhccEEcccccCHHHHHhhcCCcccccCCccccccccCc
Q psy15244 456 YKSSCEKMRRALEETQVSGVTTNLPFLLNVFDDKKFLSGEALETNFIDDN 505 (1427)
Q Consensus 456 ~~eA~~r~~raL~e~~I~Gv~tni~~l~~~l~~~~f~~g~~~~t~~i~~~ 505 (1427)
+++|++++++++++++|+|++||++||+++|.||+|++| +++|+||+++
T Consensus 396 ~~ea~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 444 (451)
T 2vpq_A 396 RDEAIMAGIRALSEFVVLGIDTTIPFHIKLLNNDIFRSG-KFNTNFLEQN 444 (451)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCSHHHHHHHHTCHHHHHT-CCCTTTTTTS
T ss_pred HHHHHHHHHHHHhccEEeCcCCCHHHHHHHhCCHhhhcC-CCccHHHhhh
Confidence 999999999999999999999999999999999999999 9999999987
No 15
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=100.00 E-value=2e-66 Score=650.94 Aligned_cols=443 Identities=32% Similarity=0.522 Sum_probs=402.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHc---------CCEEEEEecCCC--ccCccccccceEEEcCCCCCcccCCCCHHHHH
Q psy15244 55 KTMEKILIANRSEVAIRVARACNEM---------GIKSVGIYSEQD--KFSAHRTKVDQAFLVGKGMPPVAAYLNIPEII 123 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa~el---------Gi~~vav~s~~d--~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii 123 (1427)
+|++||||+|+|+++++++++|+++ |++++++++..| ..+++.++||+.+.++ +....++|+|.+.|+
T Consensus 45 ~~~kkILI~g~g~~a~~iira~~~~G~~vi~~d~gi~~v~v~s~~D~~~~~~~~~~aD~~~~ip-~~~~~~~y~d~~~l~ 123 (554)
T 1w96_A 45 TVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVP-GGTNNNNYANVDLIV 123 (554)
T ss_dssp BCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECC-CSSGGGTTTCHHHHH
T ss_pred ccccEEEEECCCHHHHHHHHHHHHcCCcceecccCceEEEEecccccccCChhhhhCCEEEEcC-CCCccccccCHHHHH
Confidence 6799999999999999999999998 667788887443 6678899999999997 445567899999999
Q ss_pred HHHHhcCCCEEEeCCCcccccHHHHHHHHHCC--CceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccc---------
Q psy15244 124 CIAKNNNVDAIHPGYGFLSEREDFAKAVIGAG--LEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTE--------- 192 (1427)
Q Consensus 124 ~ia~~~~vDaI~pg~gflsE~~~~a~~~e~~G--i~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~--------- 192 (1427)
++|+++++|+|+|++||++|++.++..|++.| ++++||++++++.++||..++++|+++|||+|++...
T Consensus 124 ~~a~~~~id~Vi~g~G~~sE~~~~~~~l~~~g~~i~~~gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~ 203 (554)
T 1w96_A 124 DIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDE 203 (554)
T ss_dssp HHHHHTTCSEEECCSSTTTTCTHHHHHHHHSTTCCEESSCCHHHHHHSCSHHHHHHHHHHTTCCBCCBTTTTCCCCEECT
T ss_pred HHHHHhCCCEEEECCCccccCHHHHHHHHHcCCeEEEeCCCHHHHHHHhCHHHHHHHHHHCCCCcCCccccccccccccc
Confidence 99999999999999999999999999999999 9999999999999999999999999999999998631
Q ss_pred ---------------cCCCHHHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEe
Q psy15244 193 ---------------PVTDVDKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEK 257 (1427)
Q Consensus 193 ---------------~v~s~eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEe 257 (1427)
.+.+.+++.++++++|||+||||..|+||+||++|++.+||.++++.+.+++ .+..++||+
T Consensus 204 ~~~l~~ip~~~~~~~~~~~~~e~~~~~~~~g~PvVvKp~~g~gg~Gv~~v~~~~el~~a~~~~~~~~----~~~~vlvEe 279 (554)
T 1w96_A 204 KTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEI----PGSPIFIMK 279 (554)
T ss_dssp TTCCEECCHHHHGGGSCSSHHHHHHHHHHHCSSEEEEETTCCTTTTEEEECSHHHHHHHHHHHHHHS----TTCCEEEEE
T ss_pred cccccccccccccccCCCCHHHHHHHHHHcCCCEEEEECCCCCCceEEEECCHHHHHHHHHHHHhhc----cCCCEEEEE
Confidence 1478899999999999999999999999999999999999999998877653 257899999
Q ss_pred eccCCceEEEEEEecccccEEEeeeeccccccccceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEc-C
Q psy15244 258 YIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLD-K 336 (1427)
Q Consensus 258 yIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd-~ 336 (1427)
||++++|++|++++|++|+++++++++|+.++++++.++.+|++.++++.++++.+.+.++++++||.|++++||+++ +
T Consensus 280 ~i~g~~e~sv~vl~d~~G~vv~l~~~~~~~~~~~~k~~~~~P~~~l~~~~~~~i~~~a~~~~~alg~~G~~~ve~~~~~~ 359 (554)
T 1w96_A 280 LAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHD 359 (554)
T ss_dssp CCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEECTT
T ss_pred ecCCCcEEEEEEEEcCCCCEEEEeeeeeeeEeeccceeeeCCCcCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECC
Confidence 999889999999999889999999999999999999999999977899999999999999999999999999999998 6
Q ss_pred CCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcCCCCcccc-----------------cc---------ccCcccc
Q psy15244 337 DDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQGKSLTELG-----------------LC---------QEKITPQ 390 (1427)
Q Consensus 337 dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G~~l~~l~-----------------l~---------q~~i~~~ 390 (1427)
+|++||||||||+|++|+++++++|+|++++++++++|.+++.++ +. |..+...
T Consensus 360 dg~~~~iEiN~R~~g~~~~~~~~~G~dl~~~~~~~a~G~~l~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 439 (554)
T 1w96_A 360 DGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPIPK 439 (554)
T ss_dssp TCCEEEEEEECSCCTTTHHHHHHHCCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCTTCCSHHHHHHCCCCCCC
T ss_pred CCCEEEEEeeCCCCcceehhhhhcCCCHHHHHHHHHcCCCcccccchhhhccCCccccccccccccccccccccccCCCC
Confidence 888999999999999999999999999999999999999886431 21 2245678
Q ss_pred eEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEEcCCHHHHHHHHHHHhhcc
Q psy15244 391 GCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHTATYKSSCEKMRRALEET 470 (1427)
Q Consensus 391 g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~ 470 (1427)
||+++||+++++|.++|.|.+|++..+..|..++++++ .....|+.|+++|||++|+|+++|+|+++|++++.++++++
T Consensus 440 g~~i~~r~~~~~~~~~~~p~~G~i~~~~~~~~~~v~~~-~~~~~g~~i~~~~~~~~~~vi~~g~~~~eA~~~~~~al~~i 518 (554)
T 1w96_A 440 GHCTACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGY-FSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKEL 518 (554)
T ss_dssp SEEEEEEEEEECCCCSSCCCSSSEEEECCSSCSSEEEE-EEECCSCSSCSSCSEEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEccCCCCCcccCCeEEeEEecCCCCCEEEe-eecccCCccCCCCCCceEEEEEEeCCHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999888877888775 34578999999999999999999999999999999999999
Q ss_pred EEcc-cccCHHHHHhhcCCcccccCCccccccccC
Q psy15244 471 QVSG-VTTNLPFLLNVFDDKKFLSGEALETNFIDD 504 (1427)
Q Consensus 471 ~I~G-v~tni~~l~~~l~~~~f~~g~~~~t~~i~~ 504 (1427)
+|+| ++|||+||++||+||+|++| +++|+||++
T Consensus 519 ~i~g~~~~~i~~~~~~~~~~~f~~~-~~~t~~~~~ 552 (554)
T 1w96_A 519 SIRGDFRTTVEYLIKLLETEDFEDN-TITTGWLDD 552 (554)
T ss_dssp TTCC----CCHHHHHHHTSHHHHTT-CCCTTHHHH
T ss_pred EEEeeccCCHHHHHHHhcCHhhhcC-CccchHhhh
Confidence 9999 99999999999999999999 999999975
No 16
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=100.00 E-value=1.6e-64 Score=618.95 Aligned_cols=442 Identities=40% Similarity=0.747 Sum_probs=409.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 56 TMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
||+||||+|+|+++++++++|+++|+++++++++.+..+++.+++|+.+.++ +.....+|.|.+.|+++|+++++|+|+
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~-p~~~~~~~~d~~~l~~~~~~~~~d~v~ 79 (449)
T 2w70_A 1 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIG-PAPSVKSYLNIPAIISAAEITGAVAIH 79 (449)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHSSEEEEEE-CSSGGGTTTCHHHHHHHHHHHTCCEEE
T ss_pred CCceEEEeCCcHHHHHHHHHHHHcCCeEEEEeccccccCchhhhCCEEEEcC-CCCccccccCHHHHHHHHHHcCCCEEE
Confidence 6899999999999999999999999999999988887788899999999875 344556899999999999999999999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHH-HHHHHhcCCcEEEe
Q psy15244 136 PGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKV-KEFCDEVEFPVILK 214 (1427)
Q Consensus 136 pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea-~~~a~~iGyPvVVK 214 (1427)
|++|+++|++.+++.|++.|++++||++++++.++||..+|++|+++|||+|++....+.+.+++ .++++++|||+|||
T Consensus 80 ~~~g~~~e~~~~~~~~e~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~g~PvvvK 159 (449)
T 2w70_A 80 PGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIK 159 (449)
T ss_dssp CCSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHHTCCBCSBCSSCCCSCHHHHHHHHHHHCSSEEEE
T ss_pred ECCCCcccCHHHHHHHHHcCCceECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccccCCHHHHHHHHHHHhCCcEEEE
Confidence 99999999998999999999999999999999999999999999999999999852257888999 89999999999999
Q ss_pred ecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccceE
Q psy15244 215 AAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKV 294 (1427)
Q Consensus 215 P~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~ 294 (1427)
|..|+||+||++|++.+|+.++++.+..++...|++..+++|+||++++|++|+++++++|+++++.+|+|+.++++++.
T Consensus 160 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~~~~~~~G~~~~~~~~~~~~~~~~~~~ 239 (449)
T 2w70_A 160 ASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKV 239 (449)
T ss_dssp ETTCCTTTTCEEECSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEE
T ss_pred ECCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEeccCCCeEEEEEEEEcCCCCEEEEeceecccccCCcce
Confidence 99999999999999999999999998887777788889999999997799999999998899999999999999999999
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcC
Q psy15244 295 IQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQG 374 (1427)
Q Consensus 295 ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G 374 (1427)
.+.+|++.++++..+++.+.+.++++++||.|++++||++++ |++||||||||+++++++++.++|+|++++++++++|
T Consensus 240 ~~~~p~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G 318 (449)
T 2w70_A 240 VEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFEN-GEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAG 318 (449)
T ss_dssp EEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET-TEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHHT
T ss_pred eeeCCcccCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEC-CCEEEEEEECCCCccchHHHHHhCCCHHHHHHHHHCC
Confidence 999999779999999999999999999999999999999998 7799999999999999999999999999999999999
Q ss_pred CCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEEcC
Q psy15244 375 KSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHTA 454 (1427)
Q Consensus 375 ~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G~ 454 (1427)
.+++ +.+.++...++++++++++++| ..|.|..|.+..+..|..++++++ ...+.|..+++++++++|+|+++|+
T Consensus 319 ~~l~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~~~~~~~~v~~~-~~~~~g~~~~~~~~~~~~~v~~~g~ 393 (449)
T 2w70_A 319 QPLS---IKQEEVHVRGHAVECRINAEDP-NTFLPSPGKITRFHAPGGFGVRWE-SHIYAGYTVPPYYDSMIGKLICYGE 393 (449)
T ss_dssp CCCS---SCGGGCCCCSEEEEEEEECBCT-TTCCBCCEECCEEECCCSTTEEEE-CCCCTTCEECSSSCSEEEEEEEEES
T ss_pred CCCC---CchhccccceeEEEEeecccCc-cccCCCCCEeceEECCCCCcEEEE-eccccCCEeccccCcceEEEEEEcC
Confidence 9875 3344556679999999999999 889999999988888887888877 4567899999999999999999999
Q ss_pred CHHHHHHHHHHHhhccEEcccccCHHHHHhhcCCcccccCCccccccccCc
Q psy15244 455 TYKSSCEKMRRALEETQVSGVTTNLPFLLNVFDDKKFLSGEALETNFIDDN 505 (1427)
Q Consensus 455 ~~~eA~~r~~raL~e~~I~Gv~tni~~l~~~l~~~~f~~g~~~~t~~i~~~ 505 (1427)
|+++|++++++++++++++|++|||+||+++|+||+|++| +++|+||+++
T Consensus 394 ~~~~a~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~ 443 (449)
T 2w70_A 394 NRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHG-GTNIHYLEKK 443 (449)
T ss_dssp SHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHTCHHHHHC-CCCTTHHHHH
T ss_pred CHHHHHHHHHHHHhhcEEeCcCCCHHHHHHHHcChhhccC-Cceehhhhhh
Confidence 9999999999999999999999999999999999999999 9999999875
No 17
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=100.00 E-value=5.5e-61 Score=566.85 Aligned_cols=333 Identities=18% Similarity=0.229 Sum_probs=256.3
Q ss_pred cCCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCc
Q psy15244 655 KLKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIP 734 (1427)
Q Consensus 655 ~~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~ 734 (1427)
..++|+|+|||||||+|++. .+|+++||++|++.|++ +|+++||+|+++ .++.+|++++.+++..+++.
T Consensus 9 ~~~~v~I~DtTLRDG~Q~~~-~~~~~~~Kl~ia~~L~~--~Gv~~IE~g~p~--------~~~~d~e~v~~i~~~~~~~~ 77 (370)
T 3rmj_A 9 QTNRVIIFDTTLRDGEQSPG-AAMTKEEKIRVARQLEK--LGVDIIEAGFAA--------ASPGDFEAVNAIAKTITKST 77 (370)
T ss_dssp -CCBCEEEECCCCCCTTSTT-CCCCHHHHHHHHHHHHH--HTCSEEEEEEGG--------GCHHHHHHHHHHHTTCSSSE
T ss_pred CCCCEEEEECCCCccccCCC-CCcCHHHHHHHHHHHHH--cCCCEEEEeCCC--------CCHHHHHHHHHHHHhCCCCe
Confidence 35789999999999999997 58999999999999999 799999998643 36789999999999999999
Q ss_pred eeeeecccccccccCCCcchHHHHHHHHHh----cCCCEEEEeccCChHHH--------------HHHHHHHHHHhcCCC
Q psy15244 735 FQMILRGNSLVGYSNYSPAEVGAFCRLASQ----AGIDIFRVFDPLNSVPN--------------LVKGMDAVQQVTGGS 796 (1427)
Q Consensus 735 ~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~----~Gid~~rif~~~nd~~~--------------~~~~i~~a~~~G~~~ 796 (1427)
+++|+|+. ..++++|.+ +|+++|++|.++||+++ +..+++++++.|.
T Consensus 78 i~~l~r~~-------------~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~-- 142 (370)
T 3rmj_A 78 VCSLSRAI-------------ERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTD-- 142 (370)
T ss_dssp EEEEEESS-------------HHHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCS--
T ss_pred EEEEecCC-------------HHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC--
Confidence 99999862 344677766 99999999999999873 3456778888887
Q ss_pred cEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCC---ceEEEeecC
Q psy15244 797 TIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPN---ILIHVHTHD 873 (1427)
Q Consensus 797 ~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~---ipi~~H~Hn 873 (1427)
.+ +|. +||.++++++|++++++.+.++||++|+||||+|+++|.+++++|+++++++|+ ++|++||||
T Consensus 143 -~v----~~~----~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hn 213 (370)
T 3rmj_A 143 -DV----EFS----CEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHN 213 (370)
T ss_dssp -CE----EEE----EETGGGSCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBC
T ss_pred -EE----EEe----cCCCCccCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCC
Confidence 44 233 778889999999999999999999999999999999999999999999999986 899999999
Q ss_pred CcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh----CCCCCCCChhhHHHHHHHHHHHhCCCCCCCC
Q psy15244 874 MAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN----TDKRCGIDLHDVCDYSSYWRKVRELYAPAHN 949 (1427)
Q Consensus 874 d~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~----~g~~tgidl~~L~~l~~~v~~~~g~~~~~~k 949 (1427)
|+|||+||+++|++|||++||+|++|||||+||++||+|+++|+. +|++|++|+++|.++++++++.+|+++++|+
T Consensus 214 d~GlAvAN~laAv~aGa~~vd~tv~GlGeraGN~~lE~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~ 293 (370)
T 3rmj_A 214 DLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRHDLFGLETGIDTTQIVPSSKLVSTITGYPVQPNK 293 (370)
T ss_dssp TTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHHTHHHHCCBCCCCGGGHHHHHHHHHHHHTCCCCSSC
T ss_pred CCChHHHHHHHHHHhCCCEEEEeccccCcccccccHHHHHHHHHhhhhccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999999999999999999999999974 4999999999999999999999999999999
Q ss_pred cccccchhhhhHHHHHHHHHHhhhhcCCCCCCCCCc-CcccEEEecCCCccHHHHHHHHHHCCC--C-HHHHHHHHHHHH
Q psy15244 950 LLWRCGIDLHDVCDYSSYWRKVRELYAPFECTDLKA-ASSEAYLYEIPGGQYTNLKFRTMSFGL--D-FEDVKRAYRTAN 1025 (1427)
Q Consensus 950 pivG~~~f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g-~~~~v~~~~~pGg~~snl~~ql~~~gl--~-~~ev~~~~~~v~ 1025 (1427)
|+||.|+|+|++|+|++++.|++.+|+||+ |+..| ..++++++++||. +++..+|+++|+ . .+++.+.+.+++
T Consensus 294 p~vG~~aF~h~sGiH~d~i~k~~~~Ye~~~-P~~vG~~~~~i~~~~~sG~--~~i~~~l~~~g~~~~~~~~~~~~~~~~k 370 (370)
T 3rmj_A 294 AIVGANAFSHESGIHQDGVLKHRETYEIMS-AESVGWATNRLSLGKLSGR--NAFKTKLADLGIELESEEALNAAFARFK 370 (370)
T ss_dssp TTTSTTTTC--------------CCSCCCC-HHHHTCC------------------------------------------
T ss_pred CccchhHHHhcccccHHHHHhCchhccccC-HHHcCCCCceEeccCCCCH--HHHHHHHHHcCCCCCcHHHHHHHHHHhC
Confidence 999999999999999999999999999999 67777 5779999999996 599999999999 3 456666666553
No 18
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=100.00 E-value=3.9e-57 Score=538.71 Aligned_cols=336 Identities=14% Similarity=0.151 Sum_probs=272.9
Q ss_pred CCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCce
Q psy15244 656 LKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPF 735 (1427)
Q Consensus 656 ~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~ 735 (1427)
|++|+|+|||||||+|++. ++|+++||++|++.|++ +|+++||+|+|+. .+..++.++.+++..+++.+
T Consensus 1 m~~v~I~DtTLRDG~Q~~~-~~~~~~~k~~ia~~L~~--~Gv~~IE~g~p~~--------~~~~~~~~~~i~~~~~~~~v 69 (382)
T 2ztj_A 1 MREWKIIDSTLREGEQFEK-ANFSTQDKVEIAKALDE--FGIEYIEVTTPVA--------SPQSRKDAEVLASLGLKAKV 69 (382)
T ss_dssp CCCCEEEEEEETGGGGSTT-CCCCHHHHHHHHHHHHH--HTCSEEEECCTTS--------CHHHHHHHHHHHTSCCSSEE
T ss_pred CCceEEEECCCCcccCCCC-CCcCHHHHHHHHHHHHH--cCcCEEEEcCCcC--------CHHHHHHHHHHHhcCCCcEE
Confidence 3579999999999999986 79999999999999999 7999999998764 23346778888888889999
Q ss_pred eeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCCh-------------HHHHHHHHHHHHHhcCCCcEEEEE
Q psy15244 736 QMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNS-------------VPNLVKGMDAVQQVTGGSTIVEAT 802 (1427)
Q Consensus 736 qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd-------------~~~~~~~i~~a~~~G~~~~~v~~~ 802 (1427)
++++|+ +++ .+++|.++|+++|++|+++|+ ++++..+++++++.|. ..++.
T Consensus 70 ~~~~r~--------~~~-----di~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~---~~~v~ 133 (382)
T 2ztj_A 70 VTHIQC--------RLD-----AAKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAP---HVEVR 133 (382)
T ss_dssp EEEEES--------CHH-----HHHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCT---TSEEE
T ss_pred EEEccc--------Chh-----hHHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC---CEEEE
Confidence 999986 233 388999999999999999998 6788999999999993 23444
Q ss_pred EEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHc-CCceEEEeecCCcchHHHH
Q psy15244 803 ICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKY-PNILIHVHTHDMAGTGVAT 881 (1427)
Q Consensus 803 i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~-p~ipi~~H~Hnd~GlA~An 881 (1427)
++++ +.++++++|++++++++.++ |++|+||||+|+++|.+++++|+.|++.+ |+++|++|||||+|||+||
T Consensus 134 ~~~e------d~~~~~~~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN 206 (382)
T 2ztj_A 134 FSAE------DTFRSEEQDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIAN 206 (382)
T ss_dssp EEET------TTTTSCHHHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHH
T ss_pred EEEE------eCCCCCHHHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHH
Confidence 4554 45689999999999999999 99999999999999999999999999985 6999999999999999999
Q ss_pred HHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhC---CCCCCCChhhHHHHHHHHHHHhCCCCCCCCcccccchhh
Q psy15244 882 TLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENT---DKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWRCGIDL 958 (1427)
Q Consensus 882 ~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~---g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~~~f~ 958 (1427)
+++|++|||++||+|++|||||+||++||+|+++|+.+ |+++++|+++|.++++++++.+|+++|+++|++|.++|+
T Consensus 207 ~laAv~aGa~~vd~tv~GlGeraGN~~lE~vv~~L~~~~~~g~~t~idl~~L~~~s~~v~~~~~~~~~~~~p~vG~~~f~ 286 (382)
T 2ztj_A 207 AYEAIEAGATHVDTTILGIGERNGITPLGGFLARMYTLQPEYVRRKYKLEMLPELDRMVARMVGVEIPFNNYITGETAFS 286 (382)
T ss_dssp HHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHHHCHHHHHHHSCGGGHHHHHHHHHHHHTCCCCTTCTTTSTTTTE
T ss_pred HHHHHHhCCCEEEEccccccccccchhHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHhCCCCCcCCCcCCcchhh
Confidence 99999999999999999999999999999999999754 478999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhhcCCCCCCCCCcCcccEEEe-cCCCccHHHHHHHHHHCCC--CHHHHHHHHHHHHHHc
Q psy15244 959 HDVCDYSSYWRKVRELYAPFECTDLKAASSEAYLY-EIPGGQYTNLKFRTMSFGL--DFEDVKRAYRTANFLL 1028 (1427)
Q Consensus 959 ~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~~~v~~~-~~pGg~~snl~~ql~~~gl--~~~ev~~~~~~v~~~l 1028 (1427)
|++|+|.+++.|++..|++|+ |+..|..+.++.+ +++|.+ ++...|+++|+ ..+++.+.+.+++++-
T Consensus 287 h~sGiH~~g~~k~~~~Ye~~~-P~~vG~~~~v~~~s~~sG~~--av~~~l~~~g~~~~~~~~~~~~~~vk~~~ 356 (382)
T 2ztj_A 287 HKAGMHLKAIYINPEAYEPYP-PEVFGVKRKLIIASRLTGRH--AIKARAEELGLHYGEEELHRVTQHIKALA 356 (382)
T ss_dssp ECCHHHHHHHHHCGGGGCSSC-GGGGTCCCEECCC--------------------------------------
T ss_pred eecccCCchhhcChhhhcccC-HHHcCCccEEEecccchhHH--HHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999 7778888888885 789986 89999999999 6667777777777654
No 19
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=100.00 E-value=1.2e-56 Score=533.64 Aligned_cols=335 Identities=15% Similarity=0.108 Sum_probs=288.9
Q ss_pred cccccCCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhC
Q psy15244 651 NSVRKLKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELI 730 (1427)
Q Consensus 651 ~~~~~~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~ 730 (1427)
++..++++|+|+|||||||+|++. ..|++++|++|++.|++ +|++.||++.++. .+..|+.++.+.+..
T Consensus 32 ~~~~~~~~V~I~DtTLRDG~Q~~~-~~~s~eeKl~Ia~~L~~--~Gv~~IEvG~P~a--------sp~d~~~~~~i~~~~ 100 (423)
T 3ivs_A 32 DFLSRVNNFSIIESTLREGEQFAN-AFFDTEKKIQIAKALDN--FGVDYIELTSPVA--------SEQSRQDCEAICKLG 100 (423)
T ss_dssp GGGCCTTSCEEEECTTTGGGGSTT-CCCCHHHHHHHHHHHHH--HTCSEEEECCTTS--------CHHHHHHHHHHHTSC
T ss_pred ccccCCCcEEEEECCCCCCCCCCC-CCcCHHHHHHHHHHHHH--cCCCEEEEeeccc--------CHHHHHHHHHHHhcC
Confidence 344567889999999999999986 68999999999999999 7999999976542 445677888888776
Q ss_pred CCCceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHH--------------HHHHHHHHHHHhcCCC
Q psy15244 731 PNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVP--------------NLVKGMDAVQQVTGGS 796 (1427)
Q Consensus 731 p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~--------------~~~~~i~~a~~~G~~~ 796 (1427)
.+..+..++|.. ...+++|.++|++.++||.+.|+.+ .+..+++++++.|.
T Consensus 101 ~~~~v~~~~r~~-------------~~di~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~-- 165 (423)
T 3ivs_A 101 LKCKILTHIRCH-------------MDDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGI-- 165 (423)
T ss_dssp CSSEEEEEEESC-------------HHHHHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTC--
T ss_pred CCCEEEEeeccC-------------hhhHHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCC--
Confidence 666666666642 2348999999999999999999853 45567889999998
Q ss_pred cEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcc
Q psy15244 797 TIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAG 876 (1427)
Q Consensus 797 ~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~G 876 (1427)
.+++.. ++.++++++|++++++.+.++|+++|+||||+|+++|.+++++|+.|++.+ +++|++|+|||+|
T Consensus 166 -~V~~~~--------eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~-~~~i~~H~Hnd~G 235 (423)
T 3ivs_A 166 -EVRFSS--------EDSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVV-SCDIECHFHNDTG 235 (423)
T ss_dssp -EEEEEE--------ESGGGSCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHC-SSEEEEEEBCTTS
T ss_pred -EEEEEE--------ccCcCCCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhc-CCeEEEEECCCCc
Confidence 766542 345589999999999999999999999999999999999999999999987 8999999999999
Q ss_pred hHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhC---CCCCCCChhhHHHHHHHHHHHhCCCCCCCCcccc
Q psy15244 877 TGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENT---DKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWR 953 (1427)
Q Consensus 877 lA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~---g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG 953 (1427)
||+||+++|++|||++||+|++|||||+||++||+|+++|... ++++++|++.|.++++++++++|+++|+|||+||
T Consensus 236 lAvAN~laAv~aGa~~vd~ti~GlGERaGNa~Le~vv~~L~~~~~~~~~~~idl~~L~~is~~v~~~~~~~v~~~kpivG 315 (423)
T 3ivs_A 236 MAIANAYCALEAGATHIDTSILGIGERNGITPLGALLARMYVTDREYITHKYKLNQLRELENLVADAVEVQIPFNNYITG 315 (423)
T ss_dssp CHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHHHCHHHHHHHSCGGGHHHHHHHHHHHTTCCCCTTCTTTS
T ss_pred hHHHHHHHHHHhCCCEEEEecccccCcccchhHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCchh
Confidence 9999999999999999999999999999999999999998753 6789999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHhhhhcCCCCCCCCCcCcccEEEe-cCCCccHHHHHHHHHHCCC--CHHHHHHHHHHH
Q psy15244 954 CGIDLHDVCDYSSYWRKVRELYAPFECTDLKAASSEAYLY-EIPGGQYTNLKFRTMSFGL--DFEDVKRAYRTA 1024 (1427)
Q Consensus 954 ~~~f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~~~v~~~-~~pGg~~snl~~ql~~~gl--~~~ev~~~~~~v 1024 (1427)
.|+|+|++|+|++++.|++.+|+||+ |+..|.+++++++ +++|.. +++..|+++|+ ..+++.+.+.++
T Consensus 316 ~~aFah~sGiH~dgilk~~~tYe~~~-Pe~vG~~r~~~v~~k~SG~~--~i~~~l~~lG~~l~~~~~~~~~~~v 386 (423)
T 3ivs_A 316 MCAFTHKAGIHAKAILANPSTYEILK-PEDFGMSRYVHVGSRLTGWN--AIKSRAEQLNLHLTDAQAKELTVRI 386 (423)
T ss_dssp TTTTEEECSGGGGGSSSCGGGCCSSC-GGGGTCCCCEEESSCCCTHH--HHHHHHHHTTCCC---CTTTSSTTT
T ss_pred HhHHHhhcchhHHHHhCCccccCCcC-HHHcCCcceEEeccccCCHH--HHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999 8888888999985 999974 99999999999 333333444343
No 20
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=2.8e-56 Score=519.58 Aligned_cols=290 Identities=17% Similarity=0.185 Sum_probs=227.4
Q ss_pred cCCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCc
Q psy15244 655 KLKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIP 734 (1427)
Q Consensus 655 ~~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~ 734 (1427)
..++|+|+|||||||+|++ +++|+++||++|++.|++ +|+++||+|.++ .++++|++++.+++..+++.
T Consensus 3 ~~~~v~I~DttlRDG~Q~~-~~~~~~~~Kl~ia~~L~~--~Gv~~IE~g~p~--------~~~~d~e~v~~i~~~~~~~~ 71 (325)
T 3eeg_A 3 LGKRIFVFDTTLRDGEQVP-GCQLNTEEKIIVAKALDE--LGVDVIEAGFPV--------SSPGDFNSVVEITKAVTRPT 71 (325)
T ss_dssp -CEECEEEECGGGCC--------CCTTHHHHHHHHHHH--HTCSEEEEECTT--------SCHHHHHHHHHHHHHCCSSE
T ss_pred CCCceEEEECCCCCcccCC-CCCCCHHHHHHHHHHHHH--cCCCEEEEeCCC--------CCHhHHHHHHHHHHhCCCCE
Confidence 3467999999999999998 589999999999999999 799999999653 36778999999999999999
Q ss_pred eeeeecccccccccCCCcchHHHHHHHHHhc----CCCEEEEeccCChHHH--------------HHHHHHHHHHhcCCC
Q psy15244 735 FQMILRGNSLVGYSNYSPAEVGAFCRLASQA----GIDIFRVFDPLNSVPN--------------LVKGMDAVQQVTGGS 796 (1427)
Q Consensus 735 ~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~----Gid~~rif~~~nd~~~--------------~~~~i~~a~~~G~~~ 796 (1427)
+++|+|+. .+++++|.++ |+++|++|+++||+++ +..+++++++.|.
T Consensus 72 i~~l~r~~-------------~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~-- 136 (325)
T 3eeg_A 72 ICALTRAK-------------EADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVH-- 136 (325)
T ss_dssp EEEECCSC-------------HHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSS--
T ss_pred EEEeecCC-------------HHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC--
Confidence 99999873 4567888887 9999999999999874 3578999999998
Q ss_pred cEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCC---ceEEEeecC
Q psy15244 797 TIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPN---ILIHVHTHD 873 (1427)
Q Consensus 797 ~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~---ipi~~H~Hn 873 (1427)
.+ +|. +|+.++++++|++++++++.++|+++|+||||+|+++|.+++++|+++++++|+ ++|++|+||
T Consensus 137 -~v----~f~----~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hn 207 (325)
T 3eeg_A 137 -EV----EFF----CEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHN 207 (325)
T ss_dssp -EE----EEE----EETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCC
T ss_pred -EE----EEE----ccccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCC
Confidence 54 333 778889999999999999999999999999999999999999999999999986 999999999
Q ss_pred CcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh----CCCCCCCChhhHHHHHHHHHHHhCCCCCCCC
Q psy15244 874 MAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN----TDKRCGIDLHDVCDYSSYWRKVRELYAPAHN 949 (1427)
Q Consensus 874 d~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~----~g~~tgidl~~L~~l~~~v~~~~g~~~~~~k 949 (1427)
|+|||+||+++|+++||++||+|++||||++||++||+|+++|+. +|++|++|+++|.++++++++.+|+++++++
T Consensus 208 d~GlA~AN~laA~~aGa~~vd~tv~GlGer~GN~~lE~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~ 287 (325)
T 3eeg_A 208 DLGLATANSLAALQNGARQVECTINGIGERAGNTALEEVVMAMECHKETLGLETGINHKKLVPISHLVSTLMRMQVQSNK 287 (325)
T ss_dssp TTSCHHHHHHHHHHHTCCEEEEBGGGCCSTTCCCBHHHHHHHHHHTHHHHCEECCCCGGGHHHHHHHHHHHTTC------
T ss_pred CCCHHHHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHHHhhhhccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999999999999999999999999985 5899999999999999999999999999999
Q ss_pred cccccchhhhhHHHHHHHHHHhhhhcCCCC
Q psy15244 950 LLWRCGIDLHDVCDYSSYWRKVRELYAPFE 979 (1427)
Q Consensus 950 pivG~~~f~~~~~~~~~~~~~~~~~Y~~f~ 979 (1427)
|+||.++|+|++|+|++++.|++.+|+||+
T Consensus 288 p~vG~~af~h~sGiH~~~~~k~~~~ye~~~ 317 (325)
T 3eeg_A 288 AIVGRNAFAHSSGIHQDGFLKHRETYEIID 317 (325)
T ss_dssp ------------------------------
T ss_pred CccchhHHHHhccccHHHHhcChhhcCCCC
Confidence 999999999999999999999999999998
No 21
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=100.00 E-value=1.6e-56 Score=528.03 Aligned_cols=328 Identities=15% Similarity=0.196 Sum_probs=294.9
Q ss_pred ccCCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEec-----cCCCchhhhhhccccChHHHHHHHHH
Q psy15244 654 RKLKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEM-----WGGAVSHTCLKFLKECPWERLAELRE 728 (1427)
Q Consensus 654 ~~~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~-----~ggatfd~~~rfl~e~p~erl~~lr~ 728 (1427)
+.+++|+|+|||||||+|++ +++|++++|++|++.|++ +|+++||+ |++++|+. +|..+++|+.++.+++
T Consensus 4 ~~~~~v~i~DttlRDG~Q~~-~~~~~~e~k~~i~~~L~~--~Gvd~IEvG~~~g~p~ssp~~--g~~~~~~~e~l~~i~~ 78 (345)
T 1nvm_A 4 NPSKKLYISDVTLRDGSHAI-RHQYTLDDVRAIARALDK--AKVDSIEVAHGDGLQGSSFNY--GFGRHTDLEYIEAVAG 78 (345)
T ss_dssp CCCCBCEEEECTTTHHHHHT-TTCCCHHHHHHHHHHHHH--HTCSEEECSCTTSTTCCBTTT--BCCSSCHHHHHHHHHT
T ss_pred CCCCCcEEEECCCCcccCCC-CCCCCHHHHHHHHHHHHH--cCCCEEEEecCCCCCCCCCcc--cCCCCCHHHHHHHHHh
Confidence 34578999999999999996 699999999999999999 79999999 78888883 8889999999999999
Q ss_pred hCCCCceeee-ecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeec
Q psy15244 729 LIPNIPFQMI-LRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAG 807 (1427)
Q Consensus 729 ~~p~~~~qml-~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~ 807 (1427)
.+|++++++| .++.+ ..+|+++|.++|+|.++|++++|++++++.+++++++.|. .+++.++.+
T Consensus 79 ~~~~~~i~~l~~p~~~-----------~~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~---~v~~~~~~a- 143 (345)
T 1nvm_A 79 EISHAQIATLLLPGIG-----------SVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGM---DTVGFLMMS- 143 (345)
T ss_dssp TCSSSEEEEEECBTTB-----------CHHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTC---EEEEEEEST-
T ss_pred hCCCCEEEEEecCCcc-----------cHHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCC---EEEEEEEeC-
Confidence 9999999999 44321 3568999999999999999999999999999999999999 887776532
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcC-CceEEEeecCCcchHHHHHHHHH
Q psy15244 808 DLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYP-NILIHVHTHDMAGTGVATTLACV 886 (1427)
Q Consensus 808 d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~GlA~An~laAi 886 (1427)
++++++|+.++++.+.++|+++|+|+||+|.++|.+++++|+++|+++| ++||++|+|||+|+|+||+++|+
T Consensus 144 -------~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~ 216 (345)
T 1nvm_A 144 -------HMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAV 216 (345)
T ss_dssp -------TSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHH
T ss_pred -------CCCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHH
Confidence 3799999999999999999999999999999999999999999999996 89999999999999999999999
Q ss_pred HhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHhCCCCCCCCcccccchhhhhHHHHHH
Q psy15244 887 KAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWRCGIDLHDVCDYSS 966 (1427)
Q Consensus 887 ~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~~~f~~~~~~~~~ 966 (1427)
++||++||+|++|||+|+||++||+++++|+.+|+++++|+++|.++++++++..
T Consensus 217 ~aGa~~vd~tv~GlG~~aGN~~le~lv~~L~~~g~~~~idl~~l~~~~~~~~~~~------------------------- 271 (345)
T 1nvm_A 217 EEGCDRVDASLAGMGAGAGNAPLEVFIAVAERLGWNHGTDLYTLMDAADDIVRPL------------------------- 271 (345)
T ss_dssp HTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHHHTCBCCSCHHHHHHHHHHTTGGG-------------------------
T ss_pred HcCCCEEEecchhccCCccCcCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH-------------------------
Confidence 9999999999999999999999999999999999999999988888887764410
Q ss_pred HHHHhhhhcCCCCCCCCCcCcccEEEecCCCccHHHHHHHHHHCCC--CHHHHHHHHHHHHHHcCCCCccccchhhHHHH
Q psy15244 967 YWRKVRELYAPFECTDLKAASSEAYLYEIPGGQYTNLKFRTMSFGL--DFEDVKRAYRTANFLLGDIIKCTPSSKVVADL 1044 (1427)
Q Consensus 967 ~~~~~~~~Y~~f~~~~~~g~~~~v~~~~~pGg~~snl~~ql~~~gl--~~~ev~~~~~~v~~~lG~~~~vTP~sq~vg~~ 1044 (1427)
+.. + .+.++++|.|++ ||++||+.+|++++|+ +|+. .+++.++|++.||||+||+|||+
T Consensus 272 -----~~~--~------~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~v~~~~~~i~d~ 332 (345)
T 1nvm_A 272 -----QDR--P------VRVDRETLGLGY-AGVYSSFLRHAEIAAAKYNLKT-----LDILVELGHRRMVGGQEDMIVDV 332 (345)
T ss_dssp -----CSS--C------CSCCHHHHHHHH-HTCCTTHHHHHHHHHHHHTCCH-----HHHHHHHHHHTCCTTCTHHHHHH
T ss_pred -----hcC--C------CCCChHHHheec-cccchhHHHHHHHHHHhcCCCH-----HHHHHHcCCCceECCcHHHHHHH
Confidence 000 1 235688999999 9999999999999888 6544 47788999999999999999999
Q ss_pred HHHHHHcC
Q psy15244 1045 AIFMTQEK 1052 (1427)
Q Consensus 1045 a~~~v~~~ 1052 (1427)
|+|||+|+
T Consensus 333 a~~~~~~~ 340 (345)
T 1nvm_A 333 ALDLLAAH 340 (345)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99999975
No 22
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=100.00 E-value=1.9e-55 Score=516.28 Aligned_cols=298 Identities=15% Similarity=0.173 Sum_probs=263.2
Q ss_pred CCCeEEeecCcccCCCCCCCcccCHHHHHHHHH-HHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHH------
Q psy15244 656 LKHILLTDTTFRDAHQSLLATRVRTYDLKKVSP-FVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRE------ 728 (1427)
Q Consensus 656 ~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~-~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~------ 728 (1427)
.++|+|+|||||||+|++. ..|++++|++|++ .|++ +|+++||+|++++ +++||++++.+++
T Consensus 17 ~~~v~I~DtTlRDG~Q~~~-~~~~~~~k~~i~~~~L~~--~Gv~~IE~g~~~~--------~~~~~~~v~~~~~~~~~~~ 85 (337)
T 3ble_A 17 ETRLEILDVTLRDGEQTRG-VSFSTSEKLNIAKFLLQK--LNVDRVEIASARV--------SKGELETVQKIMEWAATEQ 85 (337)
T ss_dssp --CCEEEECHHHHHTTSTT-CCCCHHHHHHHHHHHHHT--TCCSEEEEEETTS--------CTTHHHHHHHHHHHHHHTT
T ss_pred CCceEEEECCCCCCCCCCC-CCcCHHHHHHHHHHHHHH--cCCCEEEEeCCCC--------ChhHHHHHHHHHhhhhhhc
Confidence 3579999999999999997 5699999999999 9999 8999999998764 6899999999998
Q ss_pred hCCCCceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHH--------------HHHHHHHHHHHhcC
Q psy15244 729 LIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVP--------------NLVKGMDAVQQVTG 794 (1427)
Q Consensus 729 ~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~--------------~~~~~i~~a~~~G~ 794 (1427)
..|++.+++|+|+. + ++++|.++|+|.|+||.++|+.+ ++..+++++++.|.
T Consensus 86 ~~~~~~i~~l~~~~-------------~-~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~ 151 (337)
T 3ble_A 86 LTERIEILGFVDGN-------------K-TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGL 151 (337)
T ss_dssp CGGGEEEEEESSTT-------------H-HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCeEEEEccch-------------h-hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC
Confidence 57888999998863 1 59999999999999999999874 67788999999999
Q ss_pred CCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCC
Q psy15244 795 GSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDM 874 (1427)
Q Consensus 795 ~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd 874 (1427)
.+++.+++ +|+.++++++|++++++++.++|+++|+||||+|+++|.+++++|+++++++|+++|++|+|||
T Consensus 152 ---~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd 223 (337)
T 3ble_A 152 ---KINVYLED-----WSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHND 223 (337)
T ss_dssp ---EEEEEEET-----HHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCT
T ss_pred ---EEEEEEEE-----CCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 77766543 2335689999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhC-CCCCCCChhhHHHHHHHHHHHhCCCCCCCCcccc
Q psy15244 875 AGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENT-DKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWR 953 (1427)
Q Consensus 875 ~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~-g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG 953 (1427)
+|||+||+++|++|||++||+|++||||++||++||+|+++|+.+ |+++++|+++|.++++++++.+|+++++++|++|
T Consensus 224 ~GlA~AN~laAv~aGa~~vd~tv~GlG~~aGN~~~E~lv~~L~~~~g~~tgidl~~L~~~~~~v~~~~~~~~~~~~~~vg 303 (337)
T 3ble_A 224 YDLSVANSLQAIRAGVKGLHASINGLGERAGNTPLEALVTTIHDKSNSKTNINEIAITEASRLVEVFSGKRISANRPIVG 303 (337)
T ss_dssp TSCHHHHHHHHHHTTCSEEEEBGGGCSSTTCBCBHHHHHHHHHHHSSCCCCCCGGGHHHHHHHHHHHHCCCCCTTCTTTS
T ss_pred cchHHHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCCCCccchh
Confidence 999999999999999999999999999999999999999999988 9999999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHhhhhcCCCCCCCCCcCc
Q psy15244 954 CGIDLHDVCDYSSYWRKVRELYAPFECTDLKAAS 987 (1427)
Q Consensus 954 ~~~f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~ 987 (1427)
.++|+|++|+|.+++.+++..|+||+ |+..|..
T Consensus 304 ~~~f~h~~GiH~~g~~k~~~~ye~~~-P~~vG~~ 336 (337)
T 3ble_A 304 EDVFTQTAGVHADGDKKGNLYANPIL-PERFGRK 336 (337)
T ss_dssp TTTTCC------------CTTCCSCC-GGGGTCC
T ss_pred hhhhheecccCcCceeCCccccCCCC-hHHcCCC
Confidence 99999999999999999999999999 6666653
No 23
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=100.00 E-value=1.4e-50 Score=497.45 Aligned_cols=330 Identities=13% Similarity=0.117 Sum_probs=273.7
Q ss_pred CCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhC---CC
Q psy15244 656 LKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELI---PN 732 (1427)
Q Consensus 656 ~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~---p~ 732 (1427)
.+.+.|+|||||||+|++. ..|++++|++|++.|++ +||+.||+|.++. ++..++.++.+.+.. ++
T Consensus 69 ~~~p~i~DtTLRDGeQ~~g-~~~s~eeKl~Ia~~L~~--lGVd~IEaGfP~a--------sp~D~e~v~~i~~~~l~~~~ 137 (644)
T 3hq1_A 69 DRAPLWCAVDLRDGNQALI-DPMSPARKRRMFDLLVR--MGYKEIEVGFPSA--------SQTDFDFVREIIEQGAIPDD 137 (644)
T ss_dssp CSCCEEEECCCCCCGGGCS-SCCCHHHHHHHHHHHHH--HTCSEEEEECTTT--------CHHHHHHHHHHHHTTCSCTT
T ss_pred CCCCEEEECCCCccccCCC-CCCCHHHHHHHHHHHHH--cCCCEEEEeCCCC--------ChhHHHHHHHHHhcCCCCCC
Confidence 4678999999999999985 78999999999999999 7999999987654 344577788887764 47
Q ss_pred CceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHH-----------HHH---HHHHHHHHhcCCCcE
Q psy15244 733 IPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVP-----------NLV---KGMDAVQQVTGGSTI 798 (1427)
Q Consensus 733 ~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~-----------~~~---~~i~~a~~~G~~~~~ 798 (1427)
+.++.|.|+. ...++..++.+..+|.+++++|.+.|+++ +++ .+++.+++.+.....
T Consensus 138 ~~i~aL~r~~---------~~did~a~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~ 208 (644)
T 3hq1_A 138 VTIQVLTQCR---------PELIERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPG 208 (644)
T ss_dssp CEEEEEEESC---------HHHHHHHHHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred eEEEEEecCC---------HhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccC
Confidence 8899998853 22234444455568999999999999886 333 344445555430001
Q ss_pred EEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHC---CCC---EEEEccccCcCCHHHHHHHHHHHHHHcC---CceEEE
Q psy15244 799 VEATICYAGDLTNPNKKKYSLNYYEDLAKQLVES---GAQ---VLCLKDMAGLLKPTAAKLLIGSFREKYP---NILIHV 869 (1427)
Q Consensus 799 v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~---Gad---~i~i~Dt~G~l~P~~~~~lv~~lr~~~p---~ipi~~ 869 (1427)
+...+.|. .++.++.+++|++++++.+.++ |++ +|+|+||+|+++|..++++|+.|++++| +++|++
T Consensus 209 ~~~~v~fs----~Edasrtd~dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~l~v 284 (644)
T 3hq1_A 209 TQWRFEYS----PESYTGTELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSL 284 (644)
T ss_dssp SEEEEEEE----EETGGGSCHHHHHHHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEEEEE
T ss_pred ceEEEEEc----CcccCCCCHHHHHHHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCceEEE
Confidence 11222343 5677899999999999999985 678 8999999999999999999999999997 589999
Q ss_pred eecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHhCCCCCCCC
Q psy15244 870 HTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKRCGIDLHDVCDYSSYWRKVRELYAPAHN 949 (1427)
Q Consensus 870 H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~tgidl~~L~~l~~~v~~~~g~~~~~~k 949 (1427)
|||||+|||+||+++|++|||++||+|++|+|+|+||++||+|+++|+.+|+++++|+++|.++++++++++|+++++||
T Consensus 285 H~HND~GlAvANslaAv~AGA~~Vdgti~G~GERaGNa~LE~lv~~L~~~Gi~tgidl~~L~~is~~ve~~~g~~v~~~k 364 (644)
T 3hq1_A 285 HPHNDRGTAVAAAELGFAAGADRIEGCLFGNGERTGNVCLVTLGLNLFSRGVDPQIDFSNIDEIRRTVEYCNQLPVHERH 364 (644)
T ss_dssp EEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHTTTCCCSSCCTTHHHHHHHHHHHHSCCCCTTC
T ss_pred ecCCCCCcHHHHHHHHHHhCCCEEEecCCCCCccccCccHHHHHHHHHhcccCCccCHHHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhHHHHHHHHHHhhh--------------------hcCCCCCCCCCcCccc--EEEecCCCccHHHHHHHH
Q psy15244 950 LLWRCGIDLHDVCDYSSYWRKVRE--------------------LYAPFECTDLKAASSE--AYLYEIPGGQYTNLKFRT 1007 (1427)
Q Consensus 950 pivG~~~f~~~~~~~~~~~~~~~~--------------------~Y~~f~~~~~~g~~~~--v~~~~~pGg~~snl~~ql 1007 (1427)
|+||.++|+|++|+|+|+++|++. .|+||+ |+.+|.+++ +.++++||.. ++...|
T Consensus 365 piVG~~aFah~SGiHqdailK~~~~~~~~~~~~~~~~~~~~w~~tYe~id-Pe~VG~~~~~vi~v~~~SGk~--~v~~~l 441 (644)
T 3hq1_A 365 PYGGDLVYTAFSGSHQDAINKGLDAMKLDADAADCDVDDMLWQVPYLPID-PRDVGRTYEAVIRVNSQSGKG--GVAYIM 441 (644)
T ss_dssp TTTSTTTTEECCHHHHHHHHHHHHHHHHHHHHTTCCGGGSCCCCTTCSSC-GGGGTCCCEECC-------CC--CHHHHH
T ss_pred ccccccceeecccccHHHHhcCchhhhhhhhcccccccccccccccccCC-HHHcCCcceeEEeccCcCCHH--HHHHHH
Confidence 999999999999999999999974 799999 777777765 4479999986 888899
Q ss_pred H-HCCC
Q psy15244 1008 M-SFGL 1012 (1427)
Q Consensus 1008 ~-~~gl 1012 (1427)
+ ++|+
T Consensus 442 ~~~lG~ 447 (644)
T 3hq1_A 442 KTDHGL 447 (644)
T ss_dssp HHHHCC
T ss_pred HHhcCC
Confidence 8 6999
No 24
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=100.00 E-value=6.3e-49 Score=473.92 Aligned_cols=388 Identities=18% Similarity=0.206 Sum_probs=324.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 55 KTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
.+++||||+|+|+++++++++|+++|+++++++. ++..+++..++|+.+.++ |.|.+.|+++++++++|+|
T Consensus 5 ~~~~~ilI~g~g~~~~~~~~a~~~~G~~~v~v~~-~~~~~~~~~~ad~~~~~~--------~~d~~~l~~~~~~~~~d~v 75 (403)
T 4dim_A 5 YDNKRLLILGAGRGQLGLYKAAKELGIHTIAGTM-PNAHKPCLNLADEISYMD--------ISNPDEVEQKVKDLNLDGA 75 (403)
T ss_dssp -CCCEEEEECCCGGGHHHHHHHHHHTCEEEEEEC-SSCCHHHHHHCSEEEECC--------TTCHHHHHHHTTTSCCSEE
T ss_pred cCCCEEEEECCcHhHHHHHHHHHHCCCEEEEEcC-CCCCCcchhhCCeEEEec--------CCCHHHHHHHHHHcCCCEE
Confidence 4578999999999999999999999999999954 444578889999998875 6789999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEe
Q psy15244 135 HPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILK 214 (1427)
Q Consensus 135 ~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVK 214 (1427)
+|+ ++.++...+++.+++.|++ ||++++++.++||..+|++++++|||+|++. .+.+.+++.++++++|||+|||
T Consensus 76 ~~~-~~~~~~~~~a~~~~~~gl~--g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~--~~~~~~~~~~~~~~~g~P~vvK 150 (403)
T 4dim_A 76 ATC-CLDTGIVSLARICDKENLV--GLNEEAAIMCGDKYKMKEAFKKYNVNTARHF--VVRNENELKNALENLKLPVIVK 150 (403)
T ss_dssp ECC-SCSTTHHHHHHHHHHHTCS--SCCHHHHHHHHCHHHHHHHHHHHTCCCCCEE--CCCSHHHHHHHHHTSCSSEEEE
T ss_pred EeC-CcchhHHHHHHHHHHcCcC--CCCHHHHHHHhCHHHHHHHHHHcCCCCCCEE--EeCCHHHHHHHHhcCCCCEEEE
Confidence 998 7777888899999999984 9999999999999999999999999999987 7899999999999999999999
Q ss_pred ecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeec-cc-cccccc
Q psy15244 215 AAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERD-CS-MQRRYQ 292 (1427)
Q Consensus 215 P~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd-~s-~qr~~q 292 (1427)
|..|+||+||++|++.+||.++++.+.+.+ .++.+++|+||+ |.|+++.++.. +|++..+.... .. ...+..
T Consensus 151 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~----~~~~~lvEe~i~-g~e~sv~~~~~-~g~~~~~~~~~~~~~~~~~~~ 224 (403)
T 4dim_A 151 ATDLQGSKGIYIAKKEEEAIDGFNETMNLT----KRDYCIVEEFIE-GYEFGAQAFVY-KNDVLFVMPHGDETYMSHTAV 224 (403)
T ss_dssp CSCC-----CEEESSHHHHHHHHHHHHHHC----SSSCCEEEECCC-SEEEEEEEEEE-TTEEEEEEEEEEEEEESSSEE
T ss_pred ECCCCCCCCEEEECCHHHHHHHHHHHHhcC----cCCcEEEEEccC-CcEEEEEEEEE-CCEEEEEEEecceeccCCCCc
Confidence 999999999999999999999998876642 357899999999 78999999975 35665543211 11 111233
Q ss_pred eEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCC-eEEEEEEEcCCCcEEEEeeCCCCCCch--hHHHHHhCCCHHHHHH
Q psy15244 293 KVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSN-AGTVEFLLDKDDNFYFIEVNPRLQVEH--TLSEEITGIDVVQSQI 369 (1427)
Q Consensus 293 k~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G-~~~VEflvd~dG~~yfIEINpRl~ge~--~vte~~tGiDLv~~~i 369 (1427)
...+..|+ .++++.++++.+.+.++++++||.| ++|+||+++ +|++||||||||+++++ .+++.++|+|++++++
T Consensus 225 ~~~~~~p~-~l~~~~~~~l~~~a~~~~~~lg~~gg~~~ve~~~~-~~~~~~iEiN~R~~~~~~~~~~~~~~G~d~~~~~~ 302 (403)
T 4dim_A 225 PVGHYVPL-DVKDDIIEKTKTEVKKAIKALGLNNCAVNVDMILK-DNEVYIIELTGRVGANCLPELVEINYGIEYYKMIA 302 (403)
T ss_dssp EEEEEESC-CSCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEE-TTEEEEEEEESSCCSTTHHHHHHHHHTSCHHHHHH
T ss_pred ceeEEeCC-CCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEEEE-CCcEEEEEEcCCCCCCcHHHHHHHHhCcCHHHHHH
Confidence 44566787 4999999999999999999999997 999999998 57799999999999985 5788999999999999
Q ss_pred HHHcCCCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCccccc--CCCcCCCceecccCcc--c
Q psy15244 370 KIAQGKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVD--SSCPYPGLQISPDYDS--L 445 (1427)
Q Consensus 370 ~iA~G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d--~~~~~~G~~I~~~~Ds--~ 445 (1427)
++++|.++++ +.+......++ ++||++. |.|.+|++..+..|...+.+++ .....+|+.|+++||| +
T Consensus 303 ~~~~G~~~~~--~~~~~~~~~~~-~~~~~~~------~~~~~G~i~~~~~~~~~~~~v~~~~~~~~~G~~v~~~~d~~~~ 373 (403)
T 4dim_A 303 SMAISENPLV--FWSQKSKENKA-GLARMII------ETEKSGILKEILNSNAKDDDIVEITFFKEENDEIKKFENSNDC 373 (403)
T ss_dssp HHHTTCCTHH--HHTTCCSSCCE-EEEEEEC------CSSCCEEEEEEEECCCCCTTEEEEEECCCTTCEECCSCSGGGC
T ss_pred HHHcCCCccc--ccccccccccc-ceEEEEE------ecCCCeEEEeeecccccCCCeEEEEEEcCCCCEeCCCCCCCce
Confidence 9999998743 33443334443 5788863 6788999999888776655543 1346899999999999 7
Q ss_pred eEEEEEEcCCHHHHHHHHHHHhhccEEc
Q psy15244 446 LAKIIVHTATYKSSCEKMRRALEETQVS 473 (1427)
Q Consensus 446 l~kvi~~G~~~~eA~~r~~raL~e~~I~ 473 (1427)
+|+|+++|+|+++|++++.+++++++|+
T Consensus 374 ~g~vi~~~~~~~~a~~~~~~~~~~~~i~ 401 (403)
T 4dim_A 374 IGQIIVKEETLDKCKDKLDVIINNINII 401 (403)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHTTEEEE
T ss_pred eEEEEEEeCCHHHHHHHHHHHhccEEEE
Confidence 9999999999999999999999999875
No 25
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=2.1e-49 Score=458.61 Aligned_cols=282 Identities=14% Similarity=0.158 Sum_probs=251.8
Q ss_pred CeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEecc----CCCchhhhhhccccChHHHHHHHHHhCCCC
Q psy15244 658 HILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMW----GGAVSHTCLKFLKECPWERLAELRELIPNI 733 (1427)
Q Consensus 658 ~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~----ggatfd~~~rfl~e~p~erl~~lr~~~p~~ 733 (1427)
+|+|+|||||||+|++ +++|++++|++|++.|++ +|+++||+| ++++|+++++|+ ||++++.+++ +|++
T Consensus 2 ~V~I~DtTlRDG~Qs~-~~~~~~~~k~~ia~~L~~--aGv~~IEvg~~~~p~~~f~~~~~~~---~~e~l~~i~~-~~~~ 74 (320)
T 3dxi_A 2 SLKILDCTLRDGGYYT-NWDFNSKIVDAYILAMNE--LPIDYLEVGYRNKPSKEYMGKFGYT---PVSVLKHLRN-ISTK 74 (320)
T ss_dssp -CEEEECHHHHHGGGG-TTCCCHHHHHHHHHHHHT--TTCCEEEEEECCSCCSSCCCHHHHC---CHHHHHHHHH-HCCS
T ss_pred eEEEEECCcCccccCC-CCcCCHHHHHHHHHHHHH--hCCCEEEEecccCCccccccccccC---hHHHHHHHhh-ccCC
Confidence 5899999999999997 699999999999999999 899999999 789999999996 7999999998 7999
Q ss_pred ceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCC
Q psy15244 734 PFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPN 813 (1427)
Q Consensus 734 ~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~ 813 (1427)
+++||+|+.| .||+|+.+.|. +.++|+|.||||+++++++.+.++++++++.|. .+++.+|++ +|.
T Consensus 75 ~~~~L~r~~~-----~~~~dv~~~~~--a~~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~---~v~~~~~~~----~~~ 140 (320)
T 3dxi_A 75 KIAIMLNEKN-----TTPEDLNHLLL--PIIGLVDMIRIAIDPQNIDRAIVLAKAIKTMGF---EVGFNVMYM----SKW 140 (320)
T ss_dssp EEEEEEEGGG-----CCGGGHHHHHG--GGTTTCSEEEEEECGGGHHHHHHHHHHHHTTTC---EEEEEECCT----TTG
T ss_pred eEEEEecCCC-----CChhhHHHHHH--hhhcCCCEEEEEecHHHHHHHHHHHHHHHHCCC---EEEEEEEeC----CCC
Confidence 9999999987 57889877554 456999999999999999999999999999999 899988875 442
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEE
Q psy15244 814 KKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIV 893 (1427)
Q Consensus 814 ~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~V 893 (1427)
.+++++++.+.+ .++|+++|+||||+|+++|.+++++|+++++++ ++||++|+|||+|+|+||+++|+++||++|
T Consensus 141 ---~~~~~~l~~~~~-~~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hn~~G~a~an~laA~~aGa~~v 215 (320)
T 3dxi_A 141 ---AEMNGFLSKLKA-IDKIADLFCMVDSFGGITPKEVKNLLKEVRKYT-HVPVGFHGHDNLQLGLINSITAIDDGIDFI 215 (320)
T ss_dssp ---GGSTTSGGGGGG-GTTTCSEEEEECTTSCCCHHHHHHHHHHHHHHC-CSCEEEECBCTTSCHHHHHHHHHHTTCSEE
T ss_pred ---CCHHHHHHHHHH-hhCCCCEEEECcccCCCCHHHHHHHHHHHHHhC-CCeEEEEeCCCCccHHHHHHHHHHhCCCEE
Confidence 234456666666 467999999999999999999999999999999 699999999999999999999999999999
Q ss_pred EeccccCCCCCCCCcHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHhCCCCCCCCcccccchhhhhHH---HHHHHHHH
Q psy15244 894 DVAADSMSGICSQPAMGTIVSCLENTDKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWRCGIDLHDVC---DYSSYWRK 970 (1427)
Q Consensus 894 D~av~GmG~~tgn~~lE~vv~~L~~~g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~~~f~~~~~---~~~~~~~~ 970 (1427)
|+|++|||||+||++||+|+++|+. ++++++|+..|.+++++++++. +|+++|.|+|.+.+| .|.+|...
T Consensus 216 d~si~GlG~~~GN~~~E~lv~~L~~-~~~~~~dl~~l~~~~~~~~~~~------~~~~~g~~~~~~~sg~~g~H~~~i~~ 288 (320)
T 3dxi_A 216 DATITGMGRGAGNLKMELLLTYLNK-HHGLNVDFNVLGNIITTFTPLL------EKYQWGTNLPYMLSGANNIPQKEVMD 288 (320)
T ss_dssp EEBGGGCSSTTCBCBHHHHHHHHHH-HSCCCCCHHHHHHHHHHHHHHH------HHHCCSCCHHHHHHHHTTCCHHHHHH
T ss_pred EEeccccCCcccchhHHHHHHHHHh-ccCCCcCHHHHHHHHHHHHHHH------HhcCCCCchhhHHHhccCCCHHHHHH
Confidence 9999999999999999999999998 6788999999999999999985 678999998877666 77887766
Q ss_pred hh
Q psy15244 971 VR 972 (1427)
Q Consensus 971 ~~ 972 (1427)
.+
T Consensus 289 ~~ 290 (320)
T 3dxi_A 289 WV 290 (320)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 26
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=100.00 E-value=2.7e-48 Score=449.40 Aligned_cols=275 Identities=18% Similarity=0.206 Sum_probs=249.3
Q ss_pred CCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCce
Q psy15244 656 LKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPF 735 (1427)
Q Consensus 656 ~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~ 735 (1427)
.++|+|+|||||||+|+++ ++|++++|++|++.|++ +|++.||+|+++... .+.++ .++|+.++.+++. +++.+
T Consensus 4 ~~~v~i~DtTlRDG~Q~~~-~~~~~e~k~~i~~~L~~--~Gv~~IE~g~~~~~~-~~p~~-~d~~~~~~~~~~~-~~~~~ 77 (307)
T 1ydo_A 4 PKKVTIKEVGPRDGLQNEP-VWIATEDKITWINQLSR--TGLSYIEITSFVHPK-WIPAL-RDAIDVAKGIDRE-KGVTY 77 (307)
T ss_dssp CSBCEEEECHHHHTGGGSS-SCCCHHHHHHHHHHHHT--TTCSEEEEEECSCTT-TCGGG-TTHHHHHHHSCCC-TTCEE
T ss_pred CCceEEEECCCCCCcCCCC-CCCCHHHHHHHHHHHHH--cCCCEEEECCCcCcc-ccccc-CCHHHHHHHhhhc-CCCeE
Confidence 3579999999999999997 88999999999999999 899999999765432 23444 5888887777654 88889
Q ss_pred eeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChH--------------HHHHHHHHHHHHhcCCCcEEEE
Q psy15244 736 QMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSV--------------PNLVKGMDAVQQVTGGSTIVEA 801 (1427)
Q Consensus 736 qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~--------------~~~~~~i~~a~~~G~~~~~v~~ 801 (1427)
++|++ | ...+++|.++|++.|+||+++|+. +.+..+++++++.|. .+++
T Consensus 78 ~~l~~------------~--~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~---~v~~ 140 (307)
T 1ydo_A 78 AALVP------------N--QRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANL---TTRA 140 (307)
T ss_dssp EEECC------------S--HHHHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTC---EEEE
T ss_pred EEEeC------------C--HHhHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC---EEEE
Confidence 88874 2 234999999999999999999986 356788999999999 9999
Q ss_pred EEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHH
Q psy15244 802 TICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVAT 881 (1427)
Q Consensus 802 ~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An 881 (1427)
+++++ |++|+.++++++|++++++.+.++|+++|+|+||+|+++|.+++++|+++++.+|+++|++|+|||+|||+||
T Consensus 141 ~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN 218 (307)
T 1ydo_A 141 YLSTV--FGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALAN 218 (307)
T ss_dssp EEECT--TCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHH
T ss_pred EEEEE--ecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHH
Confidence 99998 7899999999999999999999999999999999999999999999999999998999999999999999999
Q ss_pred HHHHHHhcCCEEEeccccCCC------CCCCCcHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHhCCCCCCCCcccccc
Q psy15244 882 TLACVKAGADIVDVAADSMSG------ICSQPAMGTIVSCLENTDKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWRCG 955 (1427)
Q Consensus 882 ~laAi~AGad~VD~av~GmG~------~tgn~~lE~vv~~L~~~g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~~ 955 (1427)
+++|+++||++||+|++|||| ++||++||+|+++|+.+|+++++|+++|.++++++++.+|++++++.|..+..
T Consensus 219 ~laAv~aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~~g~~t~idl~~L~~~~~~v~~~~~~~~~~~~~~~~~~ 298 (307)
T 1ydo_A 219 MVTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQVFKS 298 (307)
T ss_dssp HHHHHHHTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHTSCCCCHHHHHHTC
T ss_pred HHHHHHhCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCchhhHHHHHH
Confidence 999999999999999999999 89999999999999999999999999999999999999999999977766443
No 27
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=8.8e-47 Score=503.82 Aligned_cols=434 Identities=19% Similarity=0.320 Sum_probs=366.7
Q ss_pred CCCCCCCEEEEEcCCHH-----------HHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHH
Q psy15244 52 PPPKTMEKILIANRSEV-----------AIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIP 120 (1427)
Q Consensus 52 ~~~~~~kkVLIagrGei-----------a~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~ 120 (1427)
|...+++||||+|+|++ +.+++++|+++|+++++++++++....+..+||+.|..+ .+.+
T Consensus 2 ~~~~~~~kIlIig~G~i~ig~a~E~d~sg~~~~~al~~~G~~vv~v~~~~~~~~~~~~~ad~~~i~p---------~~~e 72 (1073)
T 1a9x_A 2 PKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEP---------IHWE 72 (1073)
T ss_dssp CCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEECSC---------CCHH
T ss_pred CCCCCCCEEEEECCCcccccccccccchHHHHHHHHHHcCCEEEEEeCCcccccCChhhCcEEEECC---------CCHH
Confidence 44456899999999987 668999999999999999999998788899999987532 4789
Q ss_pred HHHHHHHhcCCCEEEeCCCc-ccccH--HHHH--HHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCC
Q psy15244 121 EIICIAKNNNVDAIHPGYGF-LSERE--DFAK--AVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVT 195 (1427)
Q Consensus 121 ~Ii~ia~~~~vDaI~pg~gf-lsE~~--~~a~--~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~ 195 (1427)
.|.+++++.++|+|+|++|+ ..++. .+++ .|++.|++++||++++++.+.||..+|++|+++|||+|++. .+.
T Consensus 73 ~i~~i~~~~~~D~V~p~~g~~~~l~~~~~l~~~~~le~~gv~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~~--~v~ 150 (1073)
T 1a9x_A 73 VVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSG--IAH 150 (1073)
T ss_dssp HHHHHHHHHCCSEEECSSSHHHHHHHHHHHHHTTHHHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSEE--EES
T ss_pred HHHHHHHHhCCCEEEeccCCchHHHHHHHHHHhhHHHHcCCeeeCCCHHHHHHhhCHHHHHHHHHHCCcCCCCEE--EEC
Confidence 99999999999999999985 12222 2343 78899999999999999999999999999999999999987 789
Q ss_pred CHHHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccc
Q psy15244 196 DVDKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYG 275 (1427)
Q Consensus 196 s~eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G 275 (1427)
+.+++.++++++|||+||||..|+||+|+++|++.+||.++++.+... ...+.++||+||+|++|+++++++|++|
T Consensus 151 ~~~ea~~~~~~ig~PvVvKp~~~~Gg~Gv~iv~~~eel~~~~~~~~~~----~~~~~vlvEe~I~G~~E~~v~v~~d~~g 226 (1073)
T 1a9x_A 151 TMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDL----SPTKELLIDESLIGWKEYEMEVVRDKND 226 (1073)
T ss_dssp SHHHHHHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHH----CTTSCEEEEECCTTSEEEEEEEEECTTC
T ss_pred CHHHHHHHHHHcCCCEEEEECCCCCCCceEEeCCHHHHHHHHHHHHhh----CCCCcEEEEEccCCCeEEEEEEEEeCCC
Confidence 999999999999999999999999999999999999999999876653 2357899999999779999999999999
Q ss_pred cEEEeeeecccccc------ccceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEEEEcC-CCcEEEEeeCC
Q psy15244 276 DVVHLYERDCSMQR------RYQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYS-NAGTVEFLLDK-DDNFYFIEVNP 347 (1427)
Q Consensus 276 ~vv~l~erd~s~qr------~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~-G~~~VEflvd~-dG~~yfIEINp 347 (1427)
+++++ |++++ +.+..++.+|++.++++.++++.+.+.++++++||. |.+++||++++ +|++|||||||
T Consensus 227 ~~v~~----~~~e~~dp~~v~~g~s~~~~Pa~~l~~~~~~~l~~~a~~i~~~lg~~~G~~~vdf~~~~~~g~~~viEiNp 302 (1073)
T 1a9x_A 227 NCIIV----CSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNP 302 (1073)
T ss_dssp CEEEE----EEEEESSCTTSCGGGSCEEESCCSCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEECTTTCCEEEEEEES
T ss_pred CEEEE----EEEecccCCccccCcEEEEecCCCCCHHHHHHHHHHHHHHHHHcCcccCceEEEEEEECCCCCEEEEEecC
Confidence 98877 44443 335677888998899999999999999999999999 99999999997 68999999999
Q ss_pred CCCCchhHHHHHhCCCHHHHHHHHHcCCCCccccccccCcccceEEEEEEeecC-CCCCccCCCCCceeeeeCCCCCccc
Q psy15244 348 RLQVEHTLSEEITGIDVVQSQIKIAQGKSLTELGLCQEKITPQGCAIQCHLRTE-DPKRNFQPSTGRLDVFTDPASIGIR 426 (1427)
Q Consensus 348 Rl~ge~~vte~~tGiDLv~~~i~iA~G~~l~~l~l~q~~i~~~g~ai~~ri~ae-dp~~~f~P~~G~i~~~~~p~~~gvr 426 (1427)
|+++++.+++.+||+|+++.++++++|.+++++. . +++.+ +|. .|.|..+.+. ...| +..
T Consensus 303 R~~~ss~l~~~atG~~l~~~~~~~a~G~~l~~~~---~-----------~i~~~~~~a-~f~p~~~~v~-~~ip---~~~ 363 (1073)
T 1a9x_A 303 RVSRSSALASKATGFPIAKVAAKLAVGYTLDELM---N-----------DITGGRTPA-SFEPSIDYVV-TKIP---RFN 363 (1073)
T ss_dssp SCCHHHHHHHHHHSCCHHHHHHHHHTTCCGGGSB---C-----------TTTTTCSBS-CSCCBCSSEE-EEEE---ECC
T ss_pred CCCccHHHHHHHhCCCHHHHHHHHHcCCChHHhh---c-----------cccCccCHH-HcccCCCcEE-EEcc---ccc
Confidence 9999999999999999999999999999987531 1 23444 554 6889888763 2222 222
Q ss_pred ccCCCcCCCceecccCccceEEEEEEcCCHHHHHHHHHHHhhccEEcccccC--------HHHHHhhcCCcc--------
Q psy15244 427 VDSSCPYPGLQISPDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSGVTTN--------LPFLLNVFDDKK-------- 490 (1427)
Q Consensus 427 ~d~~~~~~G~~I~~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv~tn--------i~~l~~~l~~~~-------- 490 (1427)
++ .....+..+.+.++| +|+|+++|+|+++|++||.++|+ +.++|+.+| ++++.+.|.||.
T Consensus 364 ~~-~~~~~~~~~~~~~~~-~G~v~~~g~~~~ea~~ka~~~l~-~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~~ 440 (1073)
T 1a9x_A 364 FE-KFAGANDRLTTQMKS-VGEVMAIGRTQQESLQKALRGLE-VGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIA 440 (1073)
T ss_dssp GG-GCTTSCCBCCSSCCC-CEEEEEEESSHHHHHHHHHHHSS-SSCSSSCCSSCTTCTTHHHHHHHHHHTCBTTHHHHHH
T ss_pred cc-ccCCCCcccCCCccC-cEEEEEEcCCHHHHHHHHHHhhc-ccccCcCccccccccccHHHHHHHHhCCCccHHHHHH
Confidence 33 112345677788887 89999999999999999999997 889999755 678998999998
Q ss_pred --cccCCccccccccCcchhhhcCCcchhHHHHHHHHHHHhhh
Q psy15244 491 --FLSGEALETNFIDDNPQLLERNSYQTCRDMKILRFIGETLV 531 (1427)
Q Consensus 491 --f~~g~~~~t~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 531 (1427)
|+.|++ +++..++.+++++++++..+|+++...+.-
T Consensus 441 ~a~~~g~~-----~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~ 478 (1073)
T 1a9x_A 441 DAFRAGLS-----VDGVFNLTNIDRWFLVQIEELVRLEEKVAE 478 (1073)
T ss_dssp HHHHTTBC-----HHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCC-----HHHHHHhhccCHHHHHHHHHHHHHHHHHHh
Confidence 788843 556678899999998999999988877753
No 28
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=100.00 E-value=1.9e-47 Score=439.59 Aligned_cols=263 Identities=17% Similarity=0.216 Sum_probs=223.1
Q ss_pred CCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCce
Q psy15244 656 LKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPF 735 (1427)
Q Consensus 656 ~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~ 735 (1427)
+++|+|+|||||||+|++ +++|++++|++|++.|++ +|++.||+|+++. ++++|+.++.+++..+++.+
T Consensus 3 m~~v~I~DttlRDG~Q~~-~~~~~~~~K~~i~~~L~~--~Gv~~IE~g~p~~--------~~~d~e~v~~i~~~~~~~~i 71 (293)
T 3ewb_X 3 LKKIQFFDTTLRDGEQTP-GVNFDVKEKIQIALQLEK--LGIDVIEAGFPIS--------SPGDFECVKAIAKAIKHCSV 71 (293)
T ss_dssp CEEEEEEECTTTCCC------CCCHHHHHHHHHHHHH--HTCSEEEEECGGG--------CHHHHHHHHHHHHHCCSSEE
T ss_pred CCeeEEEECCCCCcCcCC-CCCCCHHHHHHHHHHHHH--cCCCEEEEeCCCC--------CccHHHHHHHHHHhcCCCEE
Confidence 467999999999999998 689999999999999999 7999999997652 56899999999999999999
Q ss_pred eeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHH--------------HHHHHHHHHHhcCCCcEEEE
Q psy15244 736 QMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPN--------------LVKGMDAVQQVTGGSTIVEA 801 (1427)
Q Consensus 736 qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~--------------~~~~i~~a~~~G~~~~~v~~ 801 (1427)
++|+|+. .++ ++..++....+|+++|++|.++||+++ ++++++++++.|. .+++
T Consensus 72 ~~l~~~~--------~~d-i~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~---~v~~ 139 (293)
T 3ewb_X 72 TGLARCV--------EGD-IDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFD---VVQF 139 (293)
T ss_dssp EEEEESS--------HHH-HHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCS---CEEE
T ss_pred EEEecCC--------HHH-HHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCC---EEEE
Confidence 9999863 111 333444444479999999999999873 5778889999998 6654
Q ss_pred EEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCC---ceEEEeecCCcchH
Q psy15244 802 TICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPN---ILIHVHTHDMAGTG 878 (1427)
Q Consensus 802 ~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~---ipi~~H~Hnd~GlA 878 (1427)
. .++.++++++|++++++.+.++|+++|+||||+|+++|.+++++|+.+++++|+ ++|++|+|||+|||
T Consensus 140 ~--------~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla 211 (293)
T 3ewb_X 140 S--------PEDATRSDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMA 211 (293)
T ss_dssp E--------EETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCH
T ss_pred E--------eccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChH
Confidence 3 334568999999999999999999999999999999999999999999999984 78999999999999
Q ss_pred HHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh----CCCCCCCChhhHHHHHHHHHHHhCCCCCCCC
Q psy15244 879 VATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN----TDKRCGIDLHDVCDYSSYWRKVRELYAPAHN 949 (1427)
Q Consensus 879 ~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~----~g~~tgidl~~L~~l~~~v~~~~g~~~~~~k 949 (1427)
+||+++|+++||++||+|++||||++||++||+|+++|+. +|++|++|+++|.++++++++.+|+++++|+
T Consensus 212 ~AN~laA~~aGa~~vd~sv~GlGeraGN~~~E~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~ 286 (293)
T 3ewb_X 212 TANALAAIENGARRVEGTINGIGERAGNTALEEVAVALHIRKDFYQAETNIVLNQFKNSSDLISRLSGMPVPRNE 286 (293)
T ss_dssp HHHHHHHHHTTCCEEEEBGGGCCTTTCBCBHHHHHHHHHHTHHHHCEEECCCGGGHHHHHHHHHHC---------
T ss_pred HHHHHHHHHhCCCEEEeeccccccccccHhHHHHHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999999999999999999985 5999999999999999999999999999985
No 29
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.5e-46 Score=432.47 Aligned_cols=273 Identities=18% Similarity=0.186 Sum_probs=248.3
Q ss_pred cCCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCc
Q psy15244 655 KLKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIP 734 (1427)
Q Consensus 655 ~~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~ 734 (1427)
..++|+|+|||||||+|++ +++|++++|++|++.|++ +|++.||+|+++.. ..++++ .++|+.++.+++ .++++
T Consensus 5 ~~~~v~i~D~tlRDG~Q~~-~~~~~~e~k~~i~~~L~~--~Gv~~IE~g~~~~~-~~~~~~-~d~~~~~~~~~~-~~~~~ 78 (302)
T 2ftp_A 5 LPKKVRLVEVGPRDGLQNE-KQPIEVADKIRLVDDLSA--AGLDYIEVGSFVSP-KWVPQM-AGSAEVFAGIRQ-RPGVT 78 (302)
T ss_dssp CCSBCEEEECTTTHHHHTS-SSCCCHHHHHHHHHHHHH--TTCSEEEEEECSCT-TTCGGG-TTHHHHHHHSCC-CTTSE
T ss_pred CCCCcEEEeCCCCCCccCC-CCCCCHHHHHHHHHHHHH--cCcCEEEECCCcCc-cccccc-cCHHHHHHHhhh-cCCCE
Confidence 3467999999999999998 589999999999999999 89999999975542 235566 478887777765 37888
Q ss_pred eeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHH--------------HHHHHHHHHHHhcCCCcEEE
Q psy15244 735 FQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVP--------------NLVKGMDAVQQVTGGSTIVE 800 (1427)
Q Consensus 735 ~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~--------------~~~~~i~~a~~~G~~~~~v~ 800 (1427)
+++|++ | .+++++|.++|++.|+||++.|+++ .++++++++++.|. .++
T Consensus 79 ~~~l~~------------~--~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~---~V~ 141 (302)
T 2ftp_A 79 YAALAP------------N--LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQV---RVR 141 (302)
T ss_dssp EEEECC------------S--HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTC---EEE
T ss_pred EEEEeC------------C--HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC---eEE
Confidence 888762 2 3569999999999999999999864 45788999999999 999
Q ss_pred EEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHH
Q psy15244 801 ATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVA 880 (1427)
Q Consensus 801 ~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~A 880 (1427)
+.|+++ |++|+.++++++|++++++.+.++|+|+|+|+||.|+++|..++++++.+++.+|++||++|+|||+|+|+|
T Consensus 142 ~~l~~~--~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~A 219 (302)
T 2ftp_A 142 GYISCV--LGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALA 219 (302)
T ss_dssp EEEECT--TCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHH
T ss_pred EEEEEE--eeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHH
Confidence 999998 678999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHHHHHhcCCEEEeccccCCC------CCCCCcHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHhCCCCCCCCccc
Q psy15244 881 TTLACVKAGADIVDVAADSMSG------ICSQPAMGTIVSCLENTDKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLW 952 (1427)
Q Consensus 881 n~laAi~AGad~VD~av~GmG~------~tgn~~lE~vv~~L~~~g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpiv 952 (1427)
|+++|+++||++||+|++|||| |+||++||+|+++|+.+|+++++|+++|.++++++++.+|++++++.|..
T Consensus 220 n~laAv~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
T 2ftp_A 220 NIYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGLEIHTGVDMHALVDAGQRICAVLGKSNGSRAAKA 297 (302)
T ss_dssp HHHHHHHTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHCCCCSCHHHHH
T ss_pred HHHHHHHhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHhCCCCCccchhh
Confidence 9999999999999999999999 89999999999999999999999999999999999999999999987755
No 30
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=100.00 E-value=4.3e-46 Score=431.13 Aligned_cols=273 Identities=19% Similarity=0.227 Sum_probs=247.1
Q ss_pred CCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCcee
Q psy15244 657 KHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQ 736 (1427)
Q Consensus 657 ~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~q 736 (1427)
++|+|+|||||||+|++. ++|++++|++|++.|++ +|++.||+|++.... .+.++ .|+|+.++.+++ .++++++
T Consensus 4 ~~v~i~D~tlRDG~Q~~~-~~~~~e~k~~i~~~L~~--~Gv~~IE~g~~~~~~-~~p~~-~d~~~~~~~~~~-~~~~~~~ 77 (298)
T 2cw6_A 4 KRVKIVEVGPRDGLQNEK-NIVSTPVKIKLIDMLSE--AGLSVIETTSFVSPK-WVPQM-GDHTEVLKGIQK-FPGINYP 77 (298)
T ss_dssp SBCEEEECTTTHHHHTCS-SCCCHHHHHHHHHHHHH--TTCSEECCEECCCTT-TCGGG-TTHHHHHHHSCC-CTTCBCC
T ss_pred CceEEEECCCCcccCCCC-CCCCHHHHHHHHHHHHH--cCcCEEEECCCcCcc-ccccc-CCHHHHHHHHhh-CCCCEEE
Confidence 579999999999999985 88999999999999999 899999999765421 13444 477877777765 6788887
Q ss_pred eeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHH--------------HHHHHHHHHHHhcCCCcEEEEE
Q psy15244 737 MILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVP--------------NLVKGMDAVQQVTGGSTIVEAT 802 (1427)
Q Consensus 737 ml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~--------------~~~~~i~~a~~~G~~~~~v~~~ 802 (1427)
+|+. | .+.+++|.++|++.++||+++|+.+ .+..+++++++.|. .+++.
T Consensus 78 ~l~~------------~--~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~---~v~~~ 140 (298)
T 2cw6_A 78 VLTP------------N--LKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANI---SVRGY 140 (298)
T ss_dssp EECC------------S--HHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTC---EEEEE
T ss_pred EEcC------------C--HHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC---eEEEE
Confidence 7651 2 3349999999999999999999874 55678999999999 99999
Q ss_pred EEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHH
Q psy15244 803 ICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATT 882 (1427)
Q Consensus 803 i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~ 882 (1427)
++|+ |++|+.++++++|+.++++.+.++|+++|+|+||+|+++|.+++++|+.+++.+|+++|++|+|||+|||+||+
T Consensus 141 l~~~--~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~ 218 (298)
T 2cw6_A 141 VSCA--LGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANT 218 (298)
T ss_dssp EETT--TCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHH
T ss_pred EEEE--eeCCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHH
Confidence 9998 78999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred HHHHHhcCCEEEeccccCCC------CCCCCcHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHhCCCCCCCCccccc
Q psy15244 883 LACVKAGADIVDVAADSMSG------ICSQPAMGTIVSCLENTDKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWRC 954 (1427)
Q Consensus 883 laAi~AGad~VD~av~GmG~------~tgn~~lE~vv~~L~~~g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~ 954 (1427)
++|+++||++||+|++|||| ++||+++|+++++|+.+|+++++|+++|.++++++++.+|++++++.|..|.
T Consensus 219 laA~~aGa~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~~~ 296 (298)
T 2cw6_A 219 LMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATC 296 (298)
T ss_dssp HHHHHTTCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHHHTCBCCCCHHHHHHHHHHHHHHTTCCCCCHHHHHHC
T ss_pred HHHHHhCCCEEEeecccccCCCCCCCCcCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCchhhhhhhc
Confidence 99999999999999999999 8999999999999999999999999999999999999999999998877664
No 31
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=100.00 E-value=1.5e-44 Score=439.11 Aligned_cols=400 Identities=18% Similarity=0.229 Sum_probs=314.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 55 KTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
+..|+|+|+|+|.....++++|+++|++++++++.++..+.+...+|+.+.++. ....+.+ .+.+.+++++.++|+|
T Consensus 3 ~~~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~~~~~~~~~~~d~~~~~~~-~~d~~~~--~~~~~~~~~~~~id~V 79 (425)
T 3vot_A 3 KRNKNLAIICQNKHLPFIFEEAERLGLKVTFFYNSAEDFPGNLPAVERCVPLPL-FEDEEAA--MDVVRQTFVEFPFDGV 79 (425)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTCEEEEEEETTSCCCCSCTTEEEEEEECT-TTCHHHH--HHHHHHHHHHSCCSEE
T ss_pred CCCcEEEEECCChhHHHHHHHHHHCCCEEEEEECCCcccccCHhhccEEEecCC-CCCHHHH--HHHHHHhhhhcCCCEE
Confidence 347899999999888899999999999999999999988888889999988751 1111112 4566777888999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEe
Q psy15244 135 HPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILK 214 (1427)
Q Consensus 135 ~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVK 214 (1427)
+|+.++.. ...+.+++.+|++ ||++++++.++||..+|++|+++|||+|++. .+.+.+++.+ .++|||+|||
T Consensus 80 ~~~~e~~~--~~~a~l~e~lglp--g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~--~~~~~~~~~~--~~~g~P~vvK 151 (425)
T 3vot_A 80 MTLFEPAL--PFTAKAAEALNLP--GLPFTTMENCRNKNKTRSILQQNGLNTPVFH--EFHTLADLEN--RKLSYPLVVK 151 (425)
T ss_dssp ECCCGGGH--HHHHHHHHHTTCS--SCCHHHHHHHHCHHHHHHHHHHTTCCCCCEE--EESSGGGGTT--CCCCSSEEEE
T ss_pred EECCchhH--HHHHHHHHHcCCC--CCCHHHHHHhhCHHHHHHHHHHCCCCCCcee--ccCcHHHHHH--hhcCCcEEEE
Confidence 99876533 3456778888987 9999999999999999999999999999986 6788887753 5789999999
Q ss_pred ecCCCCCcCeEEecCHHHHHHHHHHHHHHHH-----HccCCCcEEEEeeccCCceEEEEEEecc-cccEEEeeeeccccc
Q psy15244 215 AAFGGGGRGMRMVANKDAIEENFKRAQSEAL-----ASFGKDDMLVEKYIDRPRHIEVQILGDK-YGDVVHLYERDCSMQ 288 (1427)
Q Consensus 215 P~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~-----~~fg~~~vlVEeyIeggreieVqvl~Dg-~G~vv~l~erd~s~q 288 (1427)
|+.|+||+||++|++.+||.++++.+..... ...++..+++|+||+ |+|++|+++.++ ...++.+.++.++.+
T Consensus 152 p~~g~gs~Gv~~v~~~~el~~a~~~~~~~~~~~~~~~~~~~~~~lvEe~i~-G~e~sv~~~~~~g~~~~~~~~~~~~~~~ 230 (425)
T 3vot_A 152 PVNGFSSQGVVRVDDRKELEEAVRKVEAVNQRDLNRFVHGKTGIVAEQFID-GPEFAIETLSIQGNVHVLSIGYKGNSKG 230 (425)
T ss_dssp ESCC-----CEEECSHHHHHHHHHHHHHHTTSSHHHHHTTCCCEEEEECCC-SCEEEEEEEEETTEEEEEEEEEEECCCC
T ss_pred ECCCCCCCCceEechHHHHHHHHHHHHhhhhhhhhhhccCCCcEEEEEEec-CcEEEEEEEEeCCcEEEEeEEEEeccCC
Confidence 9999999999999999999999998765432 223567899999999 789999999753 333455678888888
Q ss_pred cccceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEEEEcCCCcEEEEeeCCCCCCc---hhHHHHHhCCCH
Q psy15244 289 RRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYS-NAGTVEFLLDKDDNFYFIEVNPRLQVE---HTLSEEITGIDV 364 (1427)
Q Consensus 289 r~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~-G~~~VEflvd~dG~~yfIEINpRl~ge---~~vte~~tGiDL 364 (1427)
..+++..+..|++ ++++.++++.+.+.++++++|+. |++|+||+++++|++||||||||++|. |.++++++|+|+
T Consensus 231 ~~~~~~~~~~Pa~-l~~~~~~~i~~~~~~~~~alg~~~G~~~ve~~~~~dG~~~~iEiN~R~gG~~~~~~l~~~~~G~d~ 309 (425)
T 3vot_A 231 PFFEEGVYIAPAQ-LKEETRLAIVKEVTGAVSALGIHQGPAHTELRLDKDGTPYVIEVGARIGGSGVSHYIVKESTGINF 309 (425)
T ss_dssp SBCCCCEEEESCC-CCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEECTTCCEEEEEEESSCGGGGHHHHHHHHHHCCCH
T ss_pred CccccceEeeccc-CCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEEEeCCcEEEEEEecCCCCCCchHHHHHHHHCCCH
Confidence 8888888999994 99999999999999999999996 999999999999999999999999875 568899999999
Q ss_pred HHHHHHHHcCCCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeC----CCCCcc-cccCCCcCCCceec
Q psy15244 365 VQSQIKIAQGKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTD----PASIGI-RVDSSCPYPGLQIS 439 (1427)
Q Consensus 365 v~~~i~iA~G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~----p~~~gv-r~d~~~~~~G~~I~ 439 (1427)
++++++.++|...... + ........++....+. .+.+|++..+.. ...++| ++. ....+|+.|.
T Consensus 310 ~~~~i~~alg~~~~~~-~-~~~~~~~~~~~~~~~~--------~~~~G~~~~i~g~~~~~~~p~v~~~~-~~~~~G~~v~ 378 (425)
T 3vot_A 310 MQLVLQNALKPLESSE-F-EGEIRPVRTAGNYIIP--------VQGSGTFEKIDGLEEVKQRQEVKRVF-QFMRRGAKIL 378 (425)
T ss_dssp HHHHHHHHHSCCCGGG-S-CSCCCCSSEEEEEECC--------CCSCEEEEEEETHHHHHTCTTEEEEE-ECCCTTCEEC
T ss_pred HHHHHHHHCCCccccc-c-ccccccceEEEEEEEc--------CCCCeEEEecCCHHHHhcCCCeEEEE-EEecCCCEeC
Confidence 9999999999754321 1 1222334444443332 244576665432 123454 333 3467899998
Q ss_pred cc--CccceEEEEEEcCCHHHHHHHHHHHhhccEEcccccCH
Q psy15244 440 PD--YDSLLAKIIVHTATYKSSCEKMRRALEETQVSGVTTNL 479 (1427)
Q Consensus 440 ~~--~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv~tni 479 (1427)
++ +++++|+|+++|+|+++|.+++++++++++|. .++||
T Consensus 379 ~~~~~~~~~g~v~~~g~~~~ea~~~~~~~~~~i~i~-~~~~i 419 (425)
T 3vot_A 379 PYPHFSGYPGFILTSHHSYEECEAFYRELDDELHII-YQNNL 419 (425)
T ss_dssp CTTCCCCCSEEEEEEESSHHHHHHHHHHHHHHCEEE-ECC--
T ss_pred CCCCCCCeEEEEEEEECCHHHHHHHHHHHhCccEEE-EeCCC
Confidence 65 45679999999999999999999999999985 34444
No 32
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=100.00 E-value=4.5e-45 Score=434.51 Aligned_cols=356 Identities=16% Similarity=0.145 Sum_probs=281.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEe
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHP 136 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~p 136 (1427)
||||||+|+|..++.++++|+++|+++++++++++ +++..+||+.++++ .+.+.+.++.+++ ++|+|+|
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~--~~~~~~aD~~~~~~-------~~~d~~~~~~~~~--~~D~v~~ 69 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ--ALIRNYADEFYCFD-------VIKEPEKLLELSK--RVDAVLP 69 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT--CTTTTTSSEEEECC-------TTTCHHHHHHHHT--SSSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC--ChhHhhCCEEEECC-------CCcCHHHHHHHhc--CCCEEEE
Confidence 78999999999999999999999999999987776 67788999999976 2456777777665 6999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeec
Q psy15244 137 GYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAA 216 (1427)
Q Consensus 137 g~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~ 216 (1427)
++|+.+++..+++.+++.|++ +||++++++.++||..+|++|+++|||+|++. .+|||+||||+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~a~~~~~dK~~~k~~l~~~gip~~~~~---------------~ig~P~vvKp~ 133 (363)
T 4ffl_A 70 VNENLACIEFLNSIKEKFSCP-VLFDFEAYRISRDKKKSKDYFKSIGVPTPQDR---------------PSKPPYFVKPP 133 (363)
T ss_dssp CCCCHHHHHHHHHHGGGCSSC-BCCCHHHHHHHTSHHHHHHHHHHTTCCCCCBS---------------CSSSCEEEECS
T ss_pred CCCChhHHHHHHHHHHHCCCc-cCCCHHHHHHhhCHHHHHHHHHhcCCCCCCce---------------ecCCCEEEEEC
Confidence 999988777777777877775 69999999999999999999999999999874 36899999999
Q ss_pred CCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccceEEE
Q psy15244 217 FGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKVIQ 296 (1427)
Q Consensus 217 ~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~ie 296 (1427)
.|+||+|++++++.+++.. ....+++|+||+ |+|++|++++|+++.+++...++|..++.+++...
T Consensus 134 ~g~g~~gv~~v~~~~~~~~-------------~~~~~~~ee~i~-g~e~sv~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 199 (363)
T 4ffl_A 134 CESSSVGARIIYDDKDLEG-------------LEPDTLVEEYVE-GEVVSLEVVGDGSHFAVVKETLVHIDETYDCHMVT 199 (363)
T ss_dssp SCCTTTTCEEEC------C-------------CCTTCEEEECCC-SEEEEEEEEEESSCEEECCCEEEEECTTSCEEEEE
T ss_pred CCCCCcCeEEeccHHHhhh-------------hccchhhhhhcc-CcEEEEEEEEECCeEEEEEEEEeccCCcccceeec
Confidence 9999999999999988653 246899999999 89999999999888777777788887777776655
Q ss_pred EccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchh-HHHHHhCCCHHHHHHHHHcCC
Q psy15244 297 IAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHT-LSEEITGIDVVQSQIKIAQGK 375 (1427)
Q Consensus 297 ~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~-vte~~tGiDLv~~~i~iA~G~ 375 (1427)
.+|. . +++.+.+.++++++||.|++++||+++++| +||||||||++++++ +++++||+|++++++++++|.
T Consensus 200 p~~~---~----~~~~~~a~~~~~~l~~~G~~~vef~~~~~~-~~viEiN~R~~g~~~~~~~~~~g~dl~~~~~~~~~g~ 271 (363)
T 4ffl_A 200 PLPA---N----PLFRQISHDLAANLPLKGIMDVEAIFGPKG-LRVIEIDARFPSQTPTVVYYSSGINLIELLFRAFTDG 271 (363)
T ss_dssp ECCC---C----HHHHHHHHHHHHTTTCEEEEEEEEEEETTE-EEEEEEECSCCSSHHHHHHHHHCCCHHHHHHHHTTTC
T ss_pred chhH---H----HHHHHHHHHHHHhCCccceeeeeeEEeCCe-EEEEEEeCCCCCChHHHHHHHHCcCHHHHHHHHHCCC
Confidence 4443 2 467889999999999999999999999765 999999999998865 899999999999999999999
Q ss_pred CCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCC-ceecccCccceEEEEEEcC
Q psy15244 376 SLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPG-LQISPDYDSLLAKIIVHTA 454 (1427)
Q Consensus 376 ~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G-~~I~~~~Ds~l~kvi~~G~ 454 (1427)
+++. ......++++.+++.++++ ..+.|..+.+. ..+...++... ..+ ....+.+++++++|+++|+
T Consensus 272 ~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~v~~vi~~G~ 339 (363)
T 4ffl_A 272 VEEI-----RAIPENKYCIYEHLMFGEN-GVLIPVGEQVL--SMGSDYGKFYE----EPGIEIFLCKGEYPVFTMVFWGK 339 (363)
T ss_dssp CCCC---------CCCEEEEEEEEECGG-GBEEECCHHHH--TTCSEEEEEEE----ETTEEEEEEESSSCEEEEEEEES
T ss_pred CCCc-----cccCCCceEEEEEEecCCC-CccCCCCceEE--ecCCCeeEEEe----cCCCCCEecCCCCceEEEEEEEC
Confidence 8752 2334456677777776553 23444433221 11111111111 111 1234678999999999999
Q ss_pred CHHHHHHHHHHHhhccEEc
Q psy15244 455 TYKSSCEKMRRALEETQVS 473 (1427)
Q Consensus 455 ~~~eA~~r~~raL~e~~I~ 473 (1427)
|++||++|++++|++++.+
T Consensus 340 ~~~eA~~k~~~al~~i~~~ 358 (363)
T 4ffl_A 340 DREETGAKRCKGLSVLKER 358 (363)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988653
No 33
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=100.00 E-value=1.3e-43 Score=425.60 Aligned_cols=382 Identities=16% Similarity=0.204 Sum_probs=308.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 55 KTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
.+++||||+|+|+++++++++++++|++++++++.++ +++...+|+.+.++ |.|.+.|+++++++++|+|
T Consensus 9 ~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~--~~~~~~~d~~~~~~--------~~d~~~l~~~~~~~~~d~v 78 (391)
T 1kjq_A 9 PAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD--APAMHVAHRSHVIN--------MLDGDALRRVVELEKPHYI 78 (391)
T ss_dssp TTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT--CGGGGGSSEEEECC--------TTCHHHHHHHHHHHCCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCC--CchhhhccceEECC--------CCCHHHHHHHHHHcCCCEE
Confidence 3467999999999999999999999999999988776 46678899988764 6788999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHH-HhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEE
Q psy15244 135 HPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAA-LKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVIL 213 (1427)
Q Consensus 135 ~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a-~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVV 213 (1427)
+|++++... .+++.+++.|+ ++||++++++.++||..+|+++ +++|||+|++. .+.+.+++.++++++|||+||
T Consensus 79 ~~~~e~~~~--~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~~~~l~~~~gip~p~~~--~~~~~~~~~~~~~~~g~P~vv 153 (391)
T 1kjq_A 79 VPEIEAIAT--DMLIQLEEEGL-NVVPCARATKLTMNREGIRRLAAEELQLPTSTYR--FADSESLFREAVADIGYPCIV 153 (391)
T ss_dssp EECSSCSCH--HHHHHHHHTTC-EESSCHHHHHHHHSHHHHHHHHHTTSCCCBCCEE--EESSHHHHHHHHHHHCSSEEE
T ss_pred EECCCcCCH--HHHHHHHhCCC-CcCCCHHHHHHhhCHHHHHHHHHHhCCCCCCCee--eeCCHHHHHHHHHhcCCCEEE
Confidence 999987764 46788899999 5799999999999999999999 89999999986 688999999999999999999
Q ss_pred eecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccce
Q psy15244 214 KAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQK 293 (1427)
Q Consensus 214 KP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk 293 (1427)
||..|+||+||++|++.+|+.++++.+...+.. ++..+++|+||++++|+++.++.+++| +. +...-......+..
T Consensus 154 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g~E~sv~~~~~~~g-~~-~~~~~~~~~~~~~~ 229 (391)
T 1kjq_A 154 KPVMSSSGKGQTFIRSAEQLAQAWKYAQQGGRA--GAGRVIVEGVVKFDFEITLLTVSAVDG-VH-FCAPVGHRQEDGDY 229 (391)
T ss_dssp EESCC---CCCEEECSGGGHHHHHHHHHHHSGG--GCCCEEEEECCCCSEEEEEEEEEETTE-EE-ECCCEEEEEETTEE
T ss_pred EeCCCCCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEEecCCCeEEEEEEEEeCCC-eE-EccCcceEEECCEE
Confidence 999999999999999999999999887654321 357899999999889999999998766 22 22100001111222
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHc
Q psy15244 294 VIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQ 373 (1427)
Q Consensus 294 ~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~ 373 (1427)
...+.|++ ++++..+++.+.+.++++++||.|++++||+++++ ++||||||||++++..++...+|+|++++++++++
T Consensus 230 ~~~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~~-~~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~ 307 (391)
T 1kjq_A 230 RESWQPQQ-MSPLALERAQEIARKVVLALGGYGLFGVELFVCGD-EVIFSEVSPRPHDTGMVTLISQDLSEFALHVRAFL 307 (391)
T ss_dssp EEEEECCC-CCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEEETT-EEEEEEEESSCCGGGGGHHHHBSSCHHHHHHHHHT
T ss_pred EEEEeCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCC-cEEEEEEECCCCCCcceeeeecCcCHHHHHHHHHc
Confidence 23456874 89999999999999999999999999999999987 69999999999988666666779999999999999
Q ss_pred CCCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEEc
Q psy15244 374 GKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHT 453 (1427)
Q Consensus 374 G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G 453 (1427)
|.++++ +...++++.+++++++|.. +....|....+. |+ ..++++. .. .+.+++.+|+|+++|
T Consensus 308 G~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-pg-~~v~~~~---~~----~~~~~~~lg~v~~~g 370 (391)
T 1kjq_A 308 GLPVGG-------IRQYGPAASAVILPQLTSQ-NVTFDNVQNAVG-AD-LQIRLFG---KP----EIDGSRRLGVALATA 370 (391)
T ss_dssp TCCCCC-------CCBCSSEEEEEECCEEEES-SCEEECGGGSCB-TT-EEEEECC---CC----CEEEECCCEEEEEEC
T ss_pred CCCCCC-------ccccCcEEEEEEEccCccc-ccccccHHHHhC-CC-CEEEEec---cC----CCCCCCeEEEEEEec
Confidence 998752 2345678889999987632 222224333333 42 3455541 12 256788899999999
Q ss_pred CCHHHHHHHHHHHhhccEEcc
Q psy15244 454 ATYKSSCEKMRRALEETQVSG 474 (1427)
Q Consensus 454 ~~~~eA~~r~~raL~e~~I~G 474 (1427)
+|+++|++++++++++++++|
T Consensus 371 ~~~~~a~~~~~~~~~~i~~~~ 391 (391)
T 1kjq_A 371 ESVVDAIERAKHAAGQVKVQG 391 (391)
T ss_dssp SSHHHHHHHHHHHHHHCEEEC
T ss_pred CCHHHHHHHHHHHHhhheecC
Confidence 999999999999999999874
No 34
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=100.00 E-value=5.3e-43 Score=426.52 Aligned_cols=395 Identities=16% Similarity=0.192 Sum_probs=306.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 55 KTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
.+++||||+|+|+++++++++++++|++++++++.++ +++...+|+.+.++ |.|.+.|++++++.++|+|
T Consensus 17 ~~~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~--~~~~~~ad~~~~~~--------~~d~~~l~~~~~~~~~d~V 86 (433)
T 2dwc_A 17 DSAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYAN--APAMQVAHRSYVGN--------MMDKDFLWSVVEREKPDAI 86 (433)
T ss_dssp TTCCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTT--CHHHHHSSEEEESC--------TTCHHHHHHHHHHHCCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC--ChhhhhcceEEECC--------CCCHHHHHHHHHHcCCCEE
Confidence 3467999999999999999999999999999998877 45677899988764 6789999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHH-HhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEE
Q psy15244 135 HPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAA-LKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVIL 213 (1427)
Q Consensus 135 ~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a-~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVV 213 (1427)
+|++++.+. .+++.+++.|+ ++||++++++.++||..+|+++ +++|||+|++. .+.+.+++.++++++|||+||
T Consensus 87 ~~~~e~~~~--~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~k~~l~~~~gip~p~~~--~~~~~~~~~~~~~~~g~P~vv 161 (433)
T 2dwc_A 87 IPEIEAINL--DALFEFEKDGY-FVVPNARATWIAMHRERLRETLVKEAKVPTSRYM--YATTLDELYEACEKIGYPCHT 161 (433)
T ss_dssp EECSSCSCH--HHHHHHHHTTC-CBSSCHHHHHHHHCHHHHHHHHHHTSCCCCCCEE--EESSHHHHHHHHHHHCSSEEE
T ss_pred EECcccCCH--HHHHHHHhcCC-eeCCCHHHHHHhhCHHHHHHHHHHhcCCCCCCee--EeCCHHHHHHHHHhcCCCEEE
Confidence 999997763 57788999999 6799999999999999999999 89999999986 688999999999999999999
Q ss_pred eecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecc--cccEEE-eeeeccccccc
Q psy15244 214 KAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDK--YGDVVH-LYERDCSMQRR 290 (1427)
Q Consensus 214 KP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg--~G~vv~-l~erd~s~qr~ 290 (1427)
||..|+||+||++|++.+|+.++++.+..++.. ++..+++|+||++++|++|.++.+. +|+++. +...-......
T Consensus 162 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g~E~sv~~~~~~~~~G~~~~~~~~~~~~~~~~ 239 (433)
T 2dwc_A 162 KAIMSSSGKGSYFVKGPEDIPKAWEEAKTKARG--SAEKIIVEEHIDFDVEVTELAVRHFDENGEIVTTFPKPVGHYQID 239 (433)
T ss_dssp EECCC------EEECSGGGHHHHHHC-----------CCEEEEECCCCSEEEEECCEEEECTTSCEEEEEECCEEEEESS
T ss_pred EECCCcCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEccCCCCeeEEEEEEecccCCCCEeEEEecccceEEEc
Confidence 999999999999999999999999876554211 3578999999998899999999875 677432 22110011112
Q ss_pred cceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchh--HHHHHhCCCHHHHH
Q psy15244 291 YQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHT--LSEEITGIDVVQSQ 368 (1427)
Q Consensus 291 ~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~--vte~~tGiDLv~~~ 368 (1427)
+.......|++ ++++..+++.+.+.++++++||.|++++||+++++ ++||||||||++++.. +...++|+|+++++
T Consensus 240 ~~~~~~~~p~~-l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~-~~~viEiN~R~~~~~~~~~~~~~~g~~~~~~~ 317 (433)
T 2dwc_A 240 GDYHASWQPAE-ISEKAEREVYRIAKRITDVLGGLGIFGVEMFVKGD-KVWANEVSPRPHDTGMVTLASHPPGFSEFALH 317 (433)
T ss_dssp SSEEEEEESCC-CCHHHHHHHHHHHHHHHHHHCSSEECEEEEEEETT-EEEEEEEESSCCGGGGGHHHHSCTTCSHHHHH
T ss_pred CEEEEEEcCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCC-cEEEEEEeCCcCCCcceehhHhccCCCHHHHH
Confidence 23344556885 99999999999999999999999999999999987 6999999999998743 33456799999999
Q ss_pred HHHHcCCCCcccc-ccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceE
Q psy15244 369 IKIAQGKSLTELG-LCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLA 447 (1427)
Q Consensus 369 i~iA~G~~l~~l~-l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~ 447 (1427)
+++++|.+++... ..+..+...++++.|++++++|. .+....|....+..|+ ..++++. ..+ ..+++.+|
T Consensus 318 ~~~~~G~~l~~~~~~~~~~~~~~~~a~~~~v~~~~~~-~~~~i~g~~~~~~~pg-~~v~~~~---~~~----~~~~~~lg 388 (433)
T 2dwc_A 318 LRAVLGLPIPGEWVDGYRLFPMLIPAATHVIKAKVSG-YSPRFRGLVKALSVPN-ATVRLFG---KPE----AYVGRRLG 388 (433)
T ss_dssp HHHHHTCCCCCEEETTEEEECCSSCEEEEEEECSSCE-ESCEEECHHHHTTSTT-EEEEECC---CSE----ECTTCEEE
T ss_pred HHHHcCCCCCcccccccccccccccEEEEEEEcCCCC-cCcCcchHHHHhhCCC-cEEEEec---CCC----CCCCCeEE
Confidence 9999999875210 00123455678889999998863 1222224322233343 2445541 111 35678899
Q ss_pred EEEEEcCCHHHHHHHHHHHhhccEEccccc
Q psy15244 448 KIIVHTATYKSSCEKMRRALEETQVSGVTT 477 (1427)
Q Consensus 448 kvi~~G~~~~eA~~r~~raL~e~~I~Gv~t 477 (1427)
+|+++|+|+++|++++.++++.++++|..-
T Consensus 389 ~v~~~g~~~~ea~~~~~~~~~~i~~~~~~~ 418 (433)
T 2dwc_A 389 IALAWDKDVEVAKRKAEMVAHMIELRTRSS 418 (433)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEECTTS
T ss_pred EEEEEeCCHHHHHHHHHHHHhheEEEeecc
Confidence 999999999999999999999999999753
No 35
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=9.7e-42 Score=406.74 Aligned_cols=359 Identities=17% Similarity=0.248 Sum_probs=296.2
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEeCC
Q psy15244 59 KILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHPGY 138 (1427)
Q Consensus 59 kVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~pg~ 138 (1427)
||||+|+|+++++++++++++|++++++++.++ +++..++|+ +.+ +|.|.+.+++++ .++|+|+|++
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~G~~v~~~~~~~~--~~~~~~a~~-~~~--------~~~d~~~l~~~~--~~~d~v~~~~ 67 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPLGLSFRFLDPSPE--ACAGQVGEL-VVG--------EFLDEGALLRFA--EGLALVTYEF 67 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTBTCCEEEEESCTT--CGGGGTSEE-EEC--------CTTCHHHHHHHH--TTCSEEEECC
T ss_pred CEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC--ChHHHhhce-Eec--------CCCCHHHHHHHH--hCCCEEEECC
Confidence 699999999999999999999999999987655 455668887 543 368899999999 6899999999
Q ss_pred CcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeecCC
Q psy15244 139 GFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAAFG 218 (1427)
Q Consensus 139 gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~~G 218 (1427)
++. +..+++.+++.| ++||++++++.++||..+|++++++|||+|++. .+.+.+++.++++++|||+||||..|
T Consensus 68 e~~--~~~~~~~l~~~g--~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~--~~~~~~~~~~~~~~~g~P~vvKp~~~ 141 (369)
T 3aw8_A 68 ENV--PVEAARRLEGRL--PLYPPAKALEVAQDRLREKTFFQGLGVPTPPFH--PVDGPEDLEEGLKRVGLPALLKTRRG 141 (369)
T ss_dssp TTC--CHHHHHHHHHHS--CBSSCHHHHHHHTCHHHHHHHHHHHTCCCCCEE--EESSHHHHHHHHTTTCSSEEEEECCC
T ss_pred CCc--CHHHHHHHHHcC--CcCCCHHHHHHhcCHHHHHHHHHHCCCCCCCce--eeCCHHHHHHHHHHcCCCEEEEEcCC
Confidence 875 367888899999 679999999999999999999999999999987 68899999999999999999999999
Q ss_pred C-CCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccceEEEE
Q psy15244 219 G-GGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKVIQI 297 (1427)
Q Consensus 219 g-GGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~ie~ 297 (1427)
+ ||+||++|++.+|+.++++.+ ++..+++|+||++|+|++++++.|++|+++.+ ...+..++.+....+.
T Consensus 142 ~~~g~Gv~~v~~~~el~~~~~~~--------~~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~-~~~~~~~~~~~~~~~~ 212 (369)
T 3aw8_A 142 GYDGKGQALVRTEEEALEALKAL--------GGRGLILEGFVPFDREVSLLAVRGRTGEVAFY-PLVENRHWGGILRLSL 212 (369)
T ss_dssp ------EEEECSHHHHHHHHTTT--------CSSSEEEEECCCCSEEEEEEEEECTTSCEEEC-CCEEEEEETTEEEEEE
T ss_pred CCCcceEEEECCHHHHHHHHHhc--------CCCcEEEEEcCCCCEEEEEEEEECCCCCEEEE-CCeeeeeeCCEEEEEE
Confidence 9 999999999999999888643 35789999999988999999999988887754 3334556666666788
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcCCCC
Q psy15244 298 APAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQGKSL 377 (1427)
Q Consensus 298 aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G~~l 377 (1427)
+|++.++++..+++.+.+.++++++||+|++++||++++ |++||||+|||+++++..+.+++|+|+++.+++.++|.++
T Consensus 213 ~p~~~l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~g~~l 291 (369)
T 3aw8_A 213 APAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQVG-EELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPL 291 (369)
T ss_dssp ESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET-TEEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHTCCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEEC-CcEEEEEEeCCcCCccceeeeeecCCHHHHHHHHHcCCCC
Confidence 899669999999999999999999999999999999998 7799999999999988778889999999999999999988
Q ss_pred ccccccccCcccceEEEEEEeecCCCCCccCCCCCceeee-eCCCCCcccccCCCcCCCceecccCccceEEEEEEcCCH
Q psy15244 378 TELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVF-TDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHTATY 456 (1427)
Q Consensus 378 ~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~-~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G~~~ 456 (1427)
+... ..++++.+++++++| + +..+ ..|+. .+.+ + |..+++ .+.+|+|+++|+|+
T Consensus 292 ~~~~-------~~~~~~~~~~~~~~~--------~-~~~~~~~p~~-~~~~-----~-g~~~~~--~~~lg~v~~~g~~~ 346 (369)
T 3aw8_A 292 GSTA-------PRGQSAMVNLIGEKP--------P-FAEVLKVEGA-HLHW-----Y-GKAVRP--GRKVGHITLRRDGL 346 (369)
T ss_dssp CCCC-------BCSEEEEEEEESCCC--------C-HHHHHTSTTE-EEEE-----C-CCCCCT--TCEEEEEEEEESSH
T ss_pred CCcc-------ccccEEEEEEeCCCc--------h-HHHhccCCCc-EEEE-----e-cCCCCC--CCeEEEEEEEcCCH
Confidence 6421 235688899998762 1 1111 12211 1222 2 222222 36699999999999
Q ss_pred HHHHHHHHHHhhccE
Q psy15244 457 KSSCEKMRRALEETQ 471 (1427)
Q Consensus 457 ~eA~~r~~raL~e~~ 471 (1427)
++|+++++++++.++
T Consensus 347 ~ea~~~~~~~~~~i~ 361 (369)
T 3aw8_A 347 KALEEGLARLSRLVS 361 (369)
T ss_dssp HHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999876
No 36
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=100.00 E-value=4.1e-43 Score=406.03 Aligned_cols=265 Identities=16% Similarity=0.183 Sum_probs=237.4
Q ss_pred CCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccc--cChHHHHHHHHHhCCCCc
Q psy15244 657 KHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLK--ECPWERLAELRELIPNIP 734 (1427)
Q Consensus 657 ~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~--e~p~erl~~lr~~~p~~~ 734 (1427)
++|+|+|||||||+|++.. .|++++|++|++.|++ +|++.||+|++.. .+|+. +++|+.++.+++. ++++
T Consensus 3 ~~v~i~d~tlRDG~Q~~~~-~~~~e~k~~i~~~L~~--~Gv~~IE~g~~~~----~~~~p~~~~~~e~~~~i~~~-~~~~ 74 (295)
T 1ydn_A 3 EHVEIVEMAARDGLQNEKR-FVPTADKIALINRLSD--CGYARIEATSFVS----PKWVPQLADSREVMAGIRRA-DGVR 74 (295)
T ss_dssp CBCEEEECTTTHHHHTSSS-CCCHHHHHHHHHHHTT--TTCSEEEEEECSC----TTTCGGGTTHHHHHHHSCCC-SSSE
T ss_pred CceEEEECCCCccccCCCC-CcCHHHHHHHHHHHHH--cCcCEEEEccCcC----ccccccccCHHHHHHHHHhC-CCCE
Confidence 5799999999999999974 5999999999999999 8999999987543 23322 4899999998765 7889
Q ss_pred eeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCC--------------hHHHHHHHHHHHHHhcCCCcEEE
Q psy15244 735 FQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLN--------------SVPNLVKGMDAVQQVTGGSTIVE 800 (1427)
Q Consensus 735 ~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~n--------------d~~~~~~~i~~a~~~G~~~~~v~ 800 (1427)
+++|+ . | .+.+++|.++|++.++||++.| .+++++++++++++.|. .++
T Consensus 75 v~~l~--~----------n--~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~---~V~ 137 (295)
T 1ydn_A 75 YSVLV--P----------N--MKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGL---AIR 137 (295)
T ss_dssp EEEEC--S----------S--HHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTC---EEE
T ss_pred EEEEe--C----------C--HHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC---eEE
Confidence 98886 2 2 3458999999999999999999 45677888999999999 999
Q ss_pred EEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHH
Q psy15244 801 ATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVA 880 (1427)
Q Consensus 801 ~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~A 880 (1427)
+.++++ |++|+.++++++|+.++++.+.++|+|+|+|+||.|.++|.+++++++.+++.+|++||++|+|||+|+|+|
T Consensus 138 ~~l~~~--~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~a 215 (295)
T 1ydn_A 138 GYVSCV--VECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALD 215 (295)
T ss_dssp EEEECS--SEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHH
T ss_pred EEEEEE--ecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHH
Confidence 999998 568998999999999999999999999999999999999999999999999999779999999999999999
Q ss_pred HHHHHHHhcCCEEEeccccCCC------CCCCCcHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHhCCCCCCC
Q psy15244 881 TTLACVKAGADIVDVAADSMSG------ICSQPAMGTIVSCLENTDKRCGIDLHDVCDYSSYWRKVRELYAPAH 948 (1427)
Q Consensus 881 n~laAi~AGad~VD~av~GmG~------~tgn~~lE~vv~~L~~~g~~tgidl~~L~~l~~~v~~~~g~~~~~~ 948 (1427)
|+++|+++||+.||+|++|||| ++||+++|+++++|+.+|+++++|+++|.++++++++.++.+.+..
T Consensus 216 n~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~~~g~~~~id~~~l~~~~~~~~~~~~~~~~~~ 289 (295)
T 1ydn_A 216 NIRVSLEKGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHEMGFETGLDLDRLRSAGLFTQALRQDKAALE 289 (295)
T ss_dssp HHHHHHHHTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHhCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCCcc
Confidence 9999999999999999999999 8999999999999999999999999999999999999999887653
No 37
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=100.00 E-value=2e-41 Score=410.34 Aligned_cols=374 Identities=15% Similarity=0.173 Sum_probs=296.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 56 TMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
+.+||||+|+|+++++++++|+++|+++++++.+++ +++..+||+.+.. +|.|.+.|+++++ ++|+|+
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~--~p~~~~ad~~~~~--------~~~d~~~l~~~a~--~~D~V~ 101 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA--SPAGAVADRHLRA--------AYDDEAALAELAG--LCEAVS 101 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT--CHHHHHSSEEECC--------CTTCHHHHHHHHH--HCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc--CchhhhCCEEEEC--------CcCCHHHHHHHHh--cCCEEE
Confidence 468999999999999999999999999998865544 7788899988763 4789999999995 599999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHh----cCCcE
Q psy15244 136 PGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDE----VEFPV 211 (1427)
Q Consensus 136 pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~----iGyPv 211 (1427)
+++ ...+..+++.+++. .++||++++++.+.||..+|++++++|||+|++. .+.+.+++.+++++ + ||+
T Consensus 102 ~~~--e~~~~~~~~~l~~~--~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~p~~~--~v~~~~e~~~~~~~~~~~~-~P~ 174 (419)
T 4e4t_A 102 TEF--ENVPAASLDFLART--TFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPHV--VIESAAALAALDDAALDAV-LPG 174 (419)
T ss_dssp ECC--TTCCHHHHHHHHTT--SEESSCHHHHHHHTCHHHHHHHHHHTTCCBCCEE--EECSHHHHHTSCHHHHHTT-CSE
T ss_pred Ecc--CcCCHHHHHHHHcc--CCcCCCHHHHHHhcCHHHHHHHHHHcCcCCCCeE--EECCHHHHHHHHHhhcccc-CCE
Confidence 654 45667888888887 4789999999999999999999999999999987 78999999998888 9 999
Q ss_pred EEeec-CCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccc
Q psy15244 212 ILKAA-FGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRR 290 (1427)
Q Consensus 212 VVKP~-~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~ 290 (1427)
||||+ .|+||+|+++|++.+|+.++++.+ ++..+++|+||++++|+++.+++|.+|+++.+...+ ..++.
T Consensus 175 VvKp~~~g~~G~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~Eisv~v~~~~~G~~~~~~~~e-~~~~~ 245 (419)
T 4e4t_A 175 ILKTARLGYDGKGQVRVSTAREARDAHAAL--------GGVPCVLEKRLPLKYEVSALIARGADGRSAAFPLAQ-NVHHN 245 (419)
T ss_dssp EEEESSSCCTTTTEEEECSHHHHHHHHHHT--------TTCCEEEEECCCEEEEEEEEEEECTTSCEEECCCEE-EEEET
T ss_pred EEEecCCCCCCCceEEECCHHHHHHHHHhc--------CCCcEEEeecCCCCeEEEEEEEEcCCCCEEEEeCeE-EEeeC
Confidence 99999 899999999999999999988643 468999999999889999999999888887653211 11222
Q ss_pred cceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHH
Q psy15244 291 YQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIK 370 (1427)
Q Consensus 291 ~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~ 370 (1427)
......++|++.++++..+++.+.+.+++++|||.|++++||+++++|++||+|||||+++++++++.++|+|+++++++
T Consensus 246 g~~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~lg~~G~~~vE~~~~~dG~~~v~EiNpR~~~sg~~t~~~~~~s~~~~~~r 325 (419)
T 4e4t_A 246 GILALTIVPAPAADTARVEEAQQAAVRIADTLGYVGVLCVEFFVLEDGSFVANEMAPRPHNSGHYTVDACATSQFEQQVR 325 (419)
T ss_dssp TEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTCCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHH
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEeCCCCEEEEEEeCCCCCCCCeEeeccCCCHHHHHHH
Confidence 22334477986699999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred HHcCCCCccccccccCcccceEEEEEEeecCCCC----CccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccce
Q psy15244 371 IAQGKSLTELGLCQEKITPQGCAIQCHLRTEDPK----RNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLL 446 (1427)
Q Consensus 371 iA~G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~----~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l 446 (1427)
+++|.+|+++.+ ...++...+....-. .+.....+.-..+..|+ ..+++.+. + ...+ ...+
T Consensus 326 a~~G~pl~~~~~-------~~~~~m~n~lg~~~~~~~~~~~~~~~~~~~~l~~p~-~~~~~ygk---~--~~~~--~rkm 390 (419)
T 4e4t_A 326 AMTRMPLGNPRQ-------HSPAAMLNILGDVWFPNGAAAGAVTPPWDTVAAMPA-AHLHLYGK---E--EARV--GRKM 390 (419)
T ss_dssp HHTTCCCCCCCB-------CSCEEEEEEEGGGGCTTCGGGCCCCCCHHHHHTSTT-EEEEECCC---S--CCCT--TCEE
T ss_pred HHcCCCCCCccc-------cCCeEEEEEecCccccccccccccchHHHHHHhCCC-CEEEECCC---C--CCCC--CCce
Confidence 999999864322 222555666654210 00000112111122222 22444311 1 1111 2348
Q ss_pred EEEEEEcCCHHHHHHHHHHHhhccEE
Q psy15244 447 AKIIVHTATYKSSCEKMRRALEETQV 472 (1427)
Q Consensus 447 ~kvi~~G~~~~eA~~r~~raL~e~~I 472 (1427)
|+|++.|+|.++|++++.++.+.++|
T Consensus 391 Ghv~~~~~~~~~~~~~a~~~~~~l~~ 416 (419)
T 4e4t_A 391 GHVNFTAEMRDDAVAAATACAQLLRV 416 (419)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeCCHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999987765
No 38
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=100.00 E-value=4.2e-41 Score=406.00 Aligned_cols=373 Identities=14% Similarity=0.183 Sum_probs=300.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 56 TMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
+.+||||+|+|+++++++++|+++|+++++++ .++ ++..++||+... ...+|.|.+.|.+++++ +|+|.
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~--~p~~~~ad~~~~------~~~~~~d~~~l~~~a~~--~d~i~ 91 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADN--SPAKQISAHDGH------VTGSFKEREAVRQLAKT--CDVVT 91 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STT--CTTGGGCCSSCC------EESCTTCHHHHHHHHTT--CSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCC--CcHHHhccccce------eecCCCCHHHHHHHHHh--CCEEE
Confidence 36899999999999999999999999999998 554 667778884211 23468999999999987 78888
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCC--CHHHHHHHHHhcCCcEEE
Q psy15244 136 PGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVT--DVDKVKEFCDEVEFPVIL 213 (1427)
Q Consensus 136 pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~--s~eea~~~a~~iGyPvVV 213 (1427)
+.++.. ...+++.+++ |++ +||++++++.+.||..+|++++++|||+|++. .+. +.+++.++++++|||+||
T Consensus 92 ~e~e~~--~~~~l~~l~~-g~~-v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~~~~~~g~P~Vv 165 (403)
T 3k5i_A 92 AEIEHV--DTYALEEVAS-EVK-IEPSWQAIRTIQNKFNQKEHLRKYGIPMAEHR--ELVENTPAELAKVGEQLGYPLML 165 (403)
T ss_dssp ESSSCS--CHHHHHHHTT-TSE-ESSCHHHHHHHTSHHHHHHHHHTTTCCBCCEE--EESSCCHHHHHHHHHHHCSSEEE
T ss_pred ECCCCC--CHHHHHHHHc-CCc-cCcCHHHHHHhcCHHHHHHHHHHCCcCCCCEE--EEcCCCHHHHHHHHHHhCCCEEE
Confidence 765543 4677888888 998 89999999999999999999999999999987 566 999999999999999999
Q ss_pred eecCCC-CCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccc
Q psy15244 214 KAAFGG-GGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQ 292 (1427)
Q Consensus 214 KP~~Gg-GGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~q 292 (1427)
||..|+ ||+|+++|++.+|+.++++.+ ++..+++|+||++++|++|.++.|++| +..+...+..++.+.
T Consensus 166 Kp~~gg~~g~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~E~sv~v~~~~~g--~~~~p~~~~~~~~g~ 235 (403)
T 3k5i_A 166 KSKTMAYDGRGNFRVNSQDDIPEALEAL--------KDRPLYAEKWAYFKMELAVIVVKTKDE--VLSYPTVETVQEDSI 235 (403)
T ss_dssp EESSSCCTTTTEEEECSTTSHHHHHHHT--------TTSCEEEEECCCEEEEEEEEEEECSSC--EEECCCEEEEEETTE
T ss_pred EeCCCCcCCCCEEEECCHHHHHHHHHhc--------CCCcEEEecCCCCCeEEEEEEEEcCCC--EEEeCCeeeEEeCCE
Confidence 999998 999999999999999988642 367899999999889999999999887 556677778888888
Q ss_pred eEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHH
Q psy15244 293 KVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIA 372 (1427)
Q Consensus 293 k~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA 372 (1427)
......|++.++++..+++.+.+.+++++|||.|++++||+++++|++||+|||||++++..++...+|+|+++++++.+
T Consensus 236 ~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~Lg~~G~~~ve~~~~~dg~~~v~EiNpR~~~sg~~~~~~~~~s~~~~~~ra~ 315 (403)
T 3k5i_A 236 CKLVYAPARNVSDAINQKAQELARKAVAAFDGKGVFGVEMFLLEDDSIMLCEIASRIHNSGHYTIEGCALSQFDAHLRAI 315 (403)
T ss_dssp EEEEEESCSSCCHHHHHHHHHHHHHHHHTSCCSEEEEEEEEEETTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCcEEEEEeecCCCCCCceeeeecCCCHHHHHHHHH
Confidence 88889999669999999999999999999999999999999998899999999999998744555668999999999999
Q ss_pred cCCCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEE
Q psy15244 373 QGKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVH 452 (1427)
Q Consensus 373 ~G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~ 452 (1427)
+|.|+++. .....+.++.+.+..++... ....+.-..+..|+ ..+++.+. ....+ ...+|+|++.
T Consensus 316 ~G~pl~~~-----~~~~~~~a~m~nilg~~~~~--~~~~~~~~~~~~p~-~~~~~ygk-----~~~~~--~rkmGhv~~~ 380 (403)
T 3k5i_A 316 LDLPIPAQ-----SLEIRQPSIMLNIIGGAAPD--THLQAAECALSIPN-ASIHLYSK-----GAAKP--GRKMGHITVT 380 (403)
T ss_dssp TTCCCCGG-----GGSBSSCEEEEEEECCSSSS--HHHHHHHHHTTSTT-EEEEECCC-----CSCCT--TCEEEEEEEE
T ss_pred cCCCCCcc-----cccCCCcEEEEEEecCCccc--cchhHHHHHhcCCC-CEEEECCC-----CCCCC--CCeeEEEEEE
Confidence 99998643 22334457777787654311 00001111111221 12344311 11111 3448999999
Q ss_pred cCCHHHHHHHHHHHhhcc
Q psy15244 453 TATYKSSCEKMRRALEET 470 (1427)
Q Consensus 453 G~~~~eA~~r~~raL~e~ 470 (1427)
|+|.++|++++.++++.+
T Consensus 381 ~~~~~~~~~~a~~~~~~~ 398 (403)
T 3k5i_A 381 APTMHEAETHIQPLIDVV 398 (403)
T ss_dssp CSSHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhh
Confidence 999999999999998764
No 39
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=100.00 E-value=3.5e-40 Score=394.81 Aligned_cols=368 Identities=18% Similarity=0.236 Sum_probs=289.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEe
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHP 136 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~p 136 (1427)
|+||||+|+|..+..++++++++|+++++++++++. +...++|+.+.++ |.|.+.+.+++ .++|+|+|
T Consensus 1 M~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~~~--~~~~~~~~~~~~~--------~~d~~~l~~~~--~~~d~v~~ 68 (380)
T 3ax6_A 1 MKKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPRS--PAGQVADEQIVAG--------FFDSERIEDLV--KGSDVTTY 68 (380)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTC--TTGGGSSEEEECC--------TTCHHHHHHHH--HTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC--chhhhCceEEECC--------CCCHHHHHHHH--hcCCEEEe
Confidence 579999999999999999999999999999876653 4556888877643 67889999999 56999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeec
Q psy15244 137 GYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAA 216 (1427)
Q Consensus 137 g~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~ 216 (1427)
+++... ..+++.+++.|++ +||+++++..++||..+|++++++|||+|++. .+.+.++ +++++|||+||||.
T Consensus 69 ~~e~~~--~~~~~~l~~~gi~-~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~--~~~~~~~---~~~~~~~P~vvKp~ 140 (380)
T 3ax6_A 69 DLEHID--VQTLKKLYNEGYK-IHPSPYTLEIIQDKFVQKEFLKKNGIPVPEYK--LVKDLES---DVREFGFPVVQKAR 140 (380)
T ss_dssp SCSCSC--HHHHHHHHHTTCE-ESSCHHHHHHHHSHHHHHHHHHHTTCCCCCEE--ECSSHHH---HHHTTCSSEEEEES
T ss_pred cccCCC--HHHHHHHHHCCCe-ECCCHHHHHHhcCHHHHHHHHHHcCCCCCCeE--EeCCHHH---HHHhcCCCEEEEec
Confidence 987654 5677889999998 68999999999999999999999999999986 6778776 67789999999999
Q ss_pred CCC-CCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeecccc--ccccce
Q psy15244 217 FGG-GGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSM--QRRYQK 293 (1427)
Q Consensus 217 ~Gg-GGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~--qr~~qk 293 (1427)
.|+ ||+|++++++.+|+.++++ ..+++|+||++++|++|.++.|++|+++.+... +.. ++.+..
T Consensus 141 ~~~y~g~Gv~~v~~~~el~~~~~------------~~~lvEe~i~~g~e~sv~~~~~~~G~~~~~~~~-~~~~~~~~~~~ 207 (380)
T 3ax6_A 141 KGGYDGRGVFIIKNEKDLENAIK------------GETYLEEFVEIEKELAVMVARNEKGEIACYPVV-EMYFDEDANIC 207 (380)
T ss_dssp CCC-----EEEECSGGGGGGCCC------------SSEEEEECCCEEEEEEEEEEECSSCCEEEEEEE-EEC--------
T ss_pred CCCCCCCCeEEECCHHHHHHHhc------------CCEEEEeccCCCeeEEEEEEECCCCCEEEECCe-eeeecccCCee
Confidence 999 9999999999999876553 589999999988999999999988887654321 223 334444
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHc
Q psy15244 294 VIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQ 373 (1427)
Q Consensus 294 ~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~ 373 (1427)
.....|++ ++++..+++.+.+.++++++||.|.+++||+++++|++||+|+|||+++++..+...+|+|+++.+++.++
T Consensus 208 ~~~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~~g~~~viEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (380)
T 3ax6_A 208 DTVIAPAR-IEEKYSKIAREIATSVVEALEGVGIFGIEMFLTKQGEILVNEIAPRPHNSGHYTIEACVTSQFEQHIRAIM 286 (380)
T ss_dssp CEEEESCS-SCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTSCEEEEEEESSCCGGGTHHHHHBSSCHHHHHHHHHT
T ss_pred EEEECCCC-CCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcEEEEEecCCCCCCceeehhhccccHHHHHHHHHh
Confidence 45677885 89999999999999999999999999999999998999999999999998778888999999999999999
Q ss_pred CCCCccccccccCcccceEEEEEEeecCCCC-CccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEE
Q psy15244 374 GKSLTELGLCQEKITPQGCAIQCHLRTEDPK-RNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVH 452 (1427)
Q Consensus 374 G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~-~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~ 452 (1427)
|.+++...+ . +.++.+++++.+.. ..+....| +..+..| ++++. ..|..++. ..+.+|+|++.
T Consensus 287 g~~l~~~~~-----~--~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~p---~~~~~----~~g~~~~~-~~~~lg~v~~~ 350 (380)
T 3ax6_A 287 NLPLGSTEL-----L--IPAVMVNLLGEEGYYGKPALIGL-EEALAIE---GLSLH----FYGKKETR-PYRKMGHFTVV 350 (380)
T ss_dssp TCCCCCCCB-----C--SCEEEEEEEBCTTCCBSEEEESH-HHHHTST---TEEEE----ECCCSCBC-BTCEEEEEEEE
T ss_pred CCCCCCccc-----c--CceEEEEEecccccccccccchh-HHHhcCC---CCEEE----ecCCCCCC-CCCeeEEEEEE
Confidence 998864321 1 22567888876642 11111223 2223223 33332 12222222 34569999999
Q ss_pred cCCHHHHHHHHHHHhhccEEcc
Q psy15244 453 TATYKSSCEKMRRALEETQVSG 474 (1427)
Q Consensus 453 G~~~~eA~~r~~raL~e~~I~G 474 (1427)
|+|+++|.++++++++.++++-
T Consensus 351 g~~~~~a~~~~~~~~~~i~~~~ 372 (380)
T 3ax6_A 351 DRDVERALEKALRAKKILKVVS 372 (380)
T ss_dssp CSSHHHHHHHHHHHTTTCEEEE
T ss_pred eCCHHHHHHHHHHHHhhhhhhc
Confidence 9999999999999999999864
No 40
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=7.2e-40 Score=402.18 Aligned_cols=376 Identities=20% Similarity=0.291 Sum_probs=307.2
Q ss_pred CEEEEEecCCCccC--ccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEeCCCccccc--HHHHHHHHHCCC
Q psy15244 81 IKSVGIYSEQDKFS--AHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHPGYGFLSER--EDFAKAVIGAGL 156 (1427)
Q Consensus 81 i~~vav~s~~d~~s--~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~pg~gflsE~--~~~a~~~e~~Gi 156 (1427)
+.+|+++++.|..+ ++...||+.|+++.. .....++.++.|+++|+++++|+|||+ +|+ ..+++.+++.|+
T Consensus 52 ~~~Vav~~~~D~~~~~p~~~~Ad~~~~~~~~-~~~~~~~~i~~I~~~a~~~~id~Vip~----sE~~l~~~a~~~e~~Gi 126 (474)
T 3vmm_A 52 KYSVAVIKDKDYFKSLADFEHPDSIYWAHED-HNKPEEEVVEQIVKVAEMFGADAITTN----NELFIAPMAKACERLGL 126 (474)
T ss_dssp HHEEEEEECGGGCSSGGGGCCCSCCSSCCSC-CCCCHHHHHHHHHHHHHHTTCSEEEES----CGGGHHHHHHHHHHTTC
T ss_pred ceEEEEEeCCCcccCCcchhhcCeEEEecCC-CCCchHHHHHHHHHHHHHcCCCEEEEC----CcccHHHHHHHHHHcCC
Confidence 45688888877654 448899999988522 222334568999999999999999994 566 689999999999
Q ss_pred ceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHH
Q psy15244 157 EFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEEN 236 (1427)
Q Consensus 157 ~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a 236 (1427)
+ ||++++++.++||..+|++|+++|||+|++. .+.+.+++.++++++|||+||||..|+||+||+++++.+||.++
T Consensus 127 ~--g~~~~ai~~~~DK~~~k~~l~~~GIpvp~~~--~v~s~ee~~~~~~~lg~PvVVKP~~g~gg~Gv~iv~~~eel~~a 202 (474)
T 3vmm_A 127 R--GAGVQAAENARDKNKMRDAFNKAGVKSIKNK--RVTTLEDFRAALEEIGTPLILKPTYLASSIGVTLITDTETAEDE 202 (474)
T ss_dssp C--CSCHHHHHHTTCHHHHHHHHHHTTSCCCCEE--EECSHHHHHHHHHHSCSSEEEEESSCCTTTTCEEECCTTSHHHH
T ss_pred C--CCCHHHHHHhhCHHHHHHHHHHcCCCCCCeE--EECCHHHHHHHHHHcCCCEEEEECCCCcCceEEEECCHHHHHHH
Confidence 8 9999999999999999999999999999986 78999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-------ccCCCcEEEEeeccCCce-----------EEEE-EEecccccEEEeeeeccccccccceEEEE
Q psy15244 237 FKRAQSEALA-------SFGKDDMLVEKYIDRPRH-----------IEVQ-ILGDKYGDVVHLYERDCSMQRRYQKVIQI 297 (1427)
Q Consensus 237 ~~~a~~ea~~-------~fg~~~vlVEeyIeggre-----------ieVq-vl~Dg~G~vv~l~erd~s~qr~~qk~ie~ 297 (1427)
++.+.+++.. ++ ++.++|||||+|.+| +++. ++.|+++.++++.+++|+.+ +++.++.
T Consensus 203 ~~~~~~~~~~~~~~~a~~~-~~~vlVEe~I~G~e~~~~q~~~~~~e~sv~~v~~dg~~~~v~i~~~~~~~~--~~~~~~~ 279 (474)
T 3vmm_A 203 FNRVNDYLKSINVPKAVTF-EAPFIAEEFLQGEYGDWYQTEGYSDYISIEGIMADGEYFPIAIHDKTPQIG--FTETSHI 279 (474)
T ss_dssp HHHHHHHHTTSCCCTTCCC-SCSEEEEECCCBCHHHHCSSSSSCSEEEEEEEEETTEEEEEEEEEECCCBT--TBCCEEE
T ss_pred HHHHHHHHhhccccccccC-CCeEEEEeCCCCceeeeeecccccceeEEEEEEECCeEEEEEEEeeccCCC--ccceEEE
Confidence 9998876553 33 378999999996664 7886 45677777788889999877 7888899
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHcCCCCeE-EEEEEEcCCCcEEEEeeCCCCCC--chhHHHHHhCCCHHHHHHHHHc-
Q psy15244 298 APAQDMSVSVRDAITETSVRLAKSLGYSNAG-TVEFLLDKDDNFYFIEVNPRLQV--EHTLSEEITGIDVVQSQIKIAQ- 373 (1427)
Q Consensus 298 aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~-~VEflvd~dG~~yfIEINpRl~g--e~~vte~~tGiDLv~~~i~iA~- 373 (1427)
+|+ .++++.+++|.+.+.++++++||+|.+ |+||+++++|++||||||||++| ++++++.++|+|++++++++++
T Consensus 280 ~Pa-~l~~~~~~~l~~~a~~~~~alG~~g~~~~vef~~~~dg~~~~iEvNpR~~G~~~~~~~~~~tG~dl~~~~i~~a~~ 358 (474)
T 3vmm_A 280 TPS-ILDEEAKKKIVEAAKKANEGLGLQNCATHTEIKLMKNREPGLIESAARFAGWNMIPNIKKVFGLDMAQLLLDVLCF 358 (474)
T ss_dssp ESC-CCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEEGGGEEEEEEEESSCCSTTHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred ECC-CCCHHHHHHHHHHHHHHHHHcCCCCccEEEEEEEcCCCCEEEEEEeCCCCCCchHHHHHHHHCcCHHHHHHHHHcC
Confidence 999 699999999999999999999999988 69999998899999999999994 5899999999999999999999
Q ss_pred CCCCccccccccCcc-cceEEEEEEeecCCCCCc--cCCCCCc--eeeeeCCCCCc----ccccCCCc----CCCceecc
Q psy15244 374 GKSLTELGLCQEKIT-PQGCAIQCHLRTEDPKRN--FQPSTGR--LDVFTDPASIG----IRVDSSCP----YPGLQISP 440 (1427)
Q Consensus 374 G~~l~~l~l~q~~i~-~~g~ai~~ri~aedp~~~--f~P~~G~--i~~~~~p~~~g----vr~d~~~~----~~G~~I~~ 440 (1427)
|++++ +.+..+. ..+++..|+++.+++... +.|..+. |..+.-|.+.- +.++.... +.-+.+..
T Consensus 359 G~~l~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (474)
T 3vmm_A 359 GKDAD---LPDGLLDQEPYYVADCHLYPQHFKQNGQIPETAEDLVIEAIDIPDGLLKGDTEIVSFSAAAPGTSVDLTLFE 435 (474)
T ss_dssp GGGSC---CCSSCCCCCSSEEEEEEECHHHHHHTTSSCTTCEEEEEEEEECCTTCCCTTCEEEEEEECCTTEEECTTSCG
T ss_pred CCCCC---CCcccccCCCceeEEEEEeccccccccccCCcccceeecceecccceecccceEeeccCCCCCceEEEEeeh
Confidence 99875 4455554 467888999987776322 2233322 44455554322 22221112 23344557
Q ss_pred cCccceEEEEEEcCCHHHHHHHHHHHhhccEEc
Q psy15244 441 DYDSLLAKIIVHTATYKSSCEKMRRALEETQVS 473 (1427)
Q Consensus 441 ~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~ 473 (1427)
.|||.++.++ +|.++++..+.++++++...+.
T Consensus 436 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 467 (474)
T 3vmm_A 436 AFNSIAAFEL-KGSNSQDVAESIRQIQQHAKLT 467 (474)
T ss_dssp GGCCCEEEEE-EESCHHHHHHHHHHHHHHCEEE
T ss_pred hccCceeEEe-ccccHHHHHHHHHHHHHhhhhh
Confidence 7999888666 9999999999999999988775
No 41
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=100.00 E-value=4.1e-39 Score=391.11 Aligned_cols=381 Identities=17% Similarity=0.216 Sum_probs=291.8
Q ss_pred EEEEEcCCHHHHHHHHHH-HHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEeC
Q psy15244 59 KILIANRSEVAIRVARAC-NEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHPG 137 (1427)
Q Consensus 59 kVLIagrGeia~riiraa-~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~pg 137 (1427)
||||+|.|.....+++++ +++|++++++++. + ..+...++ .+. .+|.|.+.|+++|+++++|+|+|+
T Consensus 2 ~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~-~--~~~~~~~~-~~~--------~~~~d~~~l~~~~~~~~~d~v~~~ 69 (424)
T 2yw2_A 2 KVLVVGNGGREHAIAWKVAQSPLVKELYVAKG-N--AGIWEIAK-RVD--------ISPTDVEKLAEFAKNEGVDFTIVG 69 (424)
T ss_dssp EEEEEESSHHHHHHHHHHTTCTTCSEEEEEEC-C--TTGGGTSE-EEC--------SCTTCHHHHHHHHHHHTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhhCCCCCEEEEECC-C--cchhhhcc-ccc--------CCcCCHHHHHHHHHHcCCCEEEEC
Confidence 899999995444455444 5789998877653 2 22333454 221 246889999999999999999997
Q ss_pred CCcccccH---HHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEe
Q psy15244 138 YGFLSERE---DFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILK 214 (1427)
Q Consensus 138 ~gflsE~~---~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVK 214 (1427)
. |+. .+++.|++.|++++||++++++.++||..+|++|+++|||+|++. .+.+.+++.++++++|||+|||
T Consensus 70 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~--~~~~~~~~~~~~~~~~~PvvvK 143 (424)
T 2yw2_A 70 P----EAPLVEGIVDEFEKRGLKIFGPNKEAAKLEGSKAFAKTFMKKYGIPTARYE--VFTDFEKAKEYVEKVGAPIVVK 143 (424)
T ss_dssp S----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEE--EESCHHHHHHHHHHHCSSEEEE
T ss_pred C----chHHHHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHcCCCCCCeE--EECCHHHHHHHHHHcCCcEEEE
Confidence 4 554 477889999999999999999999999999999999999999986 6889999999999999999999
Q ss_pred ecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccC--CCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccc
Q psy15244 215 AAFGGGGRGMRMVANKDAIEENFKRAQSEALASFG--KDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQ 292 (1427)
Q Consensus 215 P~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg--~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~q 292 (1427)
|..|+||+||++|++.+|+.++++.+... ..|| +..+++|+||+ |+|++|.++.|+ +.++.. ..+++++
T Consensus 144 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-g~E~sv~~~~~G--~~~~~~----~~~~~~~ 214 (424)
T 2yw2_A 144 ADGLAAGKGAVVCETVEKAIETLDRFLNK--KIFGKSSERVVIEEFLE-GEEASYIVMING--DRYVPL----PTSQDHK 214 (424)
T ss_dssp ESSCCTTCSEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCC-SEEEEEEEEEET--TEEEEC----CCBEECC
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCC-CcEEEEEEEEcC--CEEEee----cceeecc
Confidence 99999999999999999999999876542 2344 36899999999 899999999864 433332 2222333
Q ss_pred e------------EEEEccCCCCCHHHHHHHH-HHHHHHHHHc-----CCCCeEEEEEEEcCCCcEEEEeeCCCCCCc-h
Q psy15244 293 K------------VIQIAPAQDMSVSVRDAIT-ETSVRLAKSL-----GYSNAGTVEFLLDKDDNFYFIEVNPRLQVE-H 353 (1427)
Q Consensus 293 k------------~ie~aPa~~l~~e~~~~l~-~~a~~l~~al-----g~~G~~~VEflvd~dG~~yfIEINpRl~ge-~ 353 (1427)
+ ....+|++.++++.++++. +.+.++++++ +|.|++++||+++++| +||||||||+++. +
T Consensus 215 ~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~ 293 (424)
T 2yw2_A 215 RLLDEDKGPNTGGMGAYSPTPVINEEVEKRIREEIVERVIKGLKEEGIYYRGFLYAGLMITKEG-PKVLEFNVRLGDPEA 293 (424)
T ss_dssp EEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHHTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTTH
T ss_pred ccccCCCCCCCCCCeeECCCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEecCCCCcHH
Confidence 2 2356788668999988884 6777777765 7889999999999988 9999999999965 4
Q ss_pred hHHHHHhCCCHHHHHHHHHcCCCCccccccccCcccceEEEEEEeecCCCCCccCCCCCc-eeeeeCC-CCCcccccCCC
Q psy15244 354 TLSEEITGIDVVQSQIKIAQGKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGR-LDVFTDP-ASIGIRVDSSC 431 (1427)
Q Consensus 354 ~vte~~tGiDLv~~~i~iA~G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~-i~~~~~p-~~~gvr~d~~~ 431 (1427)
...+..+|+|+++.+++++.|. ++++ ....++++.++++++++.. .|..|. |..+..+ ..+++++.
T Consensus 294 ~~i~~~~g~d~~~~~~~~~~g~-l~~~------~~~~~~a~~~~~~~~g~~~--~~~~g~~i~~~~~~~~~~~~~~~--- 361 (424)
T 2yw2_A 294 QPILMRVKNDFLETLLNFYEGK-DVHI------KEDERYALDVVLASRGYPE--KPETGKIIHGLDYLKSMEDVVVF--- 361 (424)
T ss_dssp HHHHHTBCSCHHHHHHHHHTTC-CCCC------CBCSSEEEEEEEECTTTTS--SCCCCCBCBCHHHHHTSTTEEEE---
T ss_pred HHHHHHhCCCHHHHHHHHHcCC-CCcc------cccCCcEEEEEEecCCCCC--CCCCCCcCcCcccccCCCCeEEE---
Confidence 4556679999999999999997 4422 1123678999999875432 355565 4433321 13455442
Q ss_pred cCCCceec----ccCccceEEEEEEcCCHHHHHHHHHHHhhccEEccc--ccCHH
Q psy15244 432 PYPGLQIS----PDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSGV--TTNLP 480 (1427)
Q Consensus 432 ~~~G~~I~----~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv--~tni~ 480 (1427)
..|..+. ......+++|+++|+|+++|++++++++++++++|. +++|.
T Consensus 362 -~~g~~~~~~~~~~~~~r~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~~r~di~ 415 (424)
T 2yw2_A 362 -HAGTKKEGNFTVTSGGRVLNVCAYGKTLKEAKERAYEAIRYVCFEGMHYRKDIG 415 (424)
T ss_dssp -ESSEEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTCBCCSCTT
T ss_pred -EcceEeeCCEEEecCCcEEEEEEEeCCHHHHHHHHHHHHhcceeCCcEEcchhh
Confidence 2354432 112345889999999999999999999999999996 55554
No 42
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-38 Score=385.33 Aligned_cols=376 Identities=16% Similarity=0.204 Sum_probs=291.1
Q ss_pred EEEEEcCCHHHHHHHHHH-HHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEeC
Q psy15244 59 KILIANRSEVAIRVARAC-NEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHPG 137 (1427)
Q Consensus 59 kVLIagrGeia~riiraa-~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~pg 137 (1427)
||||+|.|.....+++++ +++|++++++++... .....++ . + . +|.|.+.|+++|+++++|+|+|+
T Consensus 2 kililG~g~r~~a~a~~l~~~~g~~~v~~~~~~~---~~~~~~~-~--~------~-~~~d~~~l~~~~~~~~~d~v~~~ 68 (417)
T 2ip4_A 2 KVLVVGSGGREHALLWKAAQSPRVKRLYAAPGNA---GMEALAE-L--V------P-WNGDVEALADWALAEGIDLTLVG 68 (417)
T ss_dssp EEEEEESSHHHHHHHHHHHTCSSCCEEEEEECCT---TGGGTSE-E--C------C-CCSCHHHHHHHHHHHTCCEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEECCCc---chhhhcc-c--C------C-CccCHHHHHHHHHHcCCCEEEEC
Confidence 799999996566666766 458999887764322 1222333 2 2 1 47889999999999999999998
Q ss_pred CCcccccH---HHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEe
Q psy15244 138 YGFLSERE---DFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILK 214 (1427)
Q Consensus 138 ~gflsE~~---~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVK 214 (1427)
. |+. .+++.|++.|++++||++++++.++||..+|++|+++|||+|++. .+.+.+++.++++++|||+|||
T Consensus 69 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~--~~~~~~~~~~~~~~~~~P~vvK 142 (417)
T 2ip4_A 69 P----EAPLVEGIADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIPTARYR--VFREPLEALAYLEEVGVPVVVK 142 (417)
T ss_dssp S----SHHHHTTHHHHHHHHTCCEESCCHHHHHHHHCHHHHHHHHHHTCCCBCCEE--EESSHHHHHHHHHHHCSSEEEE
T ss_pred C----chHHHHHHHHHHHHCCCCEECccHHHHHHHcCHHHHHHHHHHcCCCCCCee--eeCCHHHHHHHHHHcCCCEEEE
Confidence 5 443 477889999999999999999999999999999999999999986 6889999999999999999999
Q ss_pred ecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccc--
Q psy15244 215 AAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQ-- 292 (1427)
Q Consensus 215 P~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~q-- 292 (1427)
|..|+||+||+++++.+|+.++++.+. ...|+ ..+++|+||+ |+|++|.++.|+ +.++.+ ...++++
T Consensus 143 p~~~~gg~Gv~~v~~~~el~~~~~~~~---~~~~~-~~~lvEe~i~-g~E~sv~~~~~G--~~~~~~----~~~~~~~~~ 211 (417)
T 2ip4_A 143 DSGLAAGKGVTVAFDLHQAKQAVANIL---NRAEG-GEVVVEEYLE-GEEATVLALTDG--ETILPL----LPSQDHKRL 211 (417)
T ss_dssp CTTSCSSTTCEEESCHHHHHHHHHHHT---TSSSC-CCEEEEECCC-SCEEEEEEEESS--SCEEEC----CCBEECCEE
T ss_pred ECCCCCCCCEEEeCCHHHHHHHHHHHH---hhccC-CeEEEEECcc-CcEEEEEEEEeC--CEEEEc----chheechhh
Confidence 999999999999999999999987664 12343 7899999999 889999999864 433332 1122222
Q ss_pred ----------eEEEEccCCCCCHHHHHHH-HHHHHHHHHHc-----CCCCeEEEEEEEcCCCcEEEEeeCCCCCCc-hhH
Q psy15244 293 ----------KVIQIAPAQDMSVSVRDAI-TETSVRLAKSL-----GYSNAGTVEFLLDKDDNFYFIEVNPRLQVE-HTL 355 (1427)
Q Consensus 293 ----------k~ie~aPa~~l~~e~~~~l-~~~a~~l~~al-----g~~G~~~VEflvd~dG~~yfIEINpRl~ge-~~v 355 (1427)
.....+|++ ++++.++++ .+.+.++++++ +|.|++++||+++++| +||||||||+++. +..
T Consensus 212 ~~~~~~~~~g~~~~~~p~~-l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~ 289 (417)
T 2ip4_A 212 LDGDQGPMTGGMGAVAPYP-MDEATLRRVEEEILGPLVRGLRAEGVVYRGVVYAGLMLTREG-PKVLEFNARFGDPEAQA 289 (417)
T ss_dssp ETTTEEEECSCSEEEESCC-CCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEECSSC-EEEEEEESSCCTTHHHH
T ss_pred ccCCCCCcCCCCeeeeCCC-CCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEEeCCC-eEEEEEecCCCCcHHHH
Confidence 234568986 999988888 56677777765 7889999999999988 9999999999976 334
Q ss_pred HHHHhCCCHHHHHHHHHcCCCCccccccccCcc-cceEEEEEEeecCCCCCccCCCCCc-eeeeeCCCCCcccccCCCcC
Q psy15244 356 SEEITGIDVVQSQIKIAQGKSLTELGLCQEKIT-PQGCAIQCHLRTEDPKRNFQPSTGR-LDVFTDPASIGIRVDSSCPY 433 (1427)
Q Consensus 356 te~~tGiDLv~~~i~iA~G~~l~~l~l~q~~i~-~~g~ai~~ri~aedp~~~f~P~~G~-i~~~~~p~~~gvr~d~~~~~ 433 (1427)
....+|+|+++.+++++.|. +++.. +. ..++++.+++.++++.. .|..|. |..+..+ +++++. .
T Consensus 290 i~~~~g~d~~~~~~~~~~g~-l~~~~-----~~~~~~~~~~~~l~~~~~~~--~~~~g~~i~~~~~~--~~v~~~----~ 355 (417)
T 2ip4_A 290 LLPLLENDLVELALRVAEGR-LAGTR-----LSWKEGAAACVVLAAPGYPE--SPRKGIPLHVPEPP--EGVLVF----H 355 (417)
T ss_dssp HTTTBCSCHHHHHHHHHHTC-GGGCC-----CCBCSSEEEEEEEECTTTTT--SCCCCCBCBCCCCC--TTEEEE----E
T ss_pred HHHHhCCCHHHHHHHHHcCC-CCcCC-----ccccCCcEEEEEEeCCCCCC--CCCCCCcccccCCC--CCeEEE----E
Confidence 45569999999999999997 43221 22 23678888888776432 466676 5555443 455443 2
Q ss_pred CCceec-----ccCccceEEEEEEcCCHHHHHHHHHHHhhccEEccc--ccCHHH
Q psy15244 434 PGLQIS-----PDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSGV--TTNLPF 481 (1427)
Q Consensus 434 ~G~~I~-----~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv--~tni~~ 481 (1427)
.|..+. ... +.+|+|+++|+|+++|++++++++++++++|. +++|..
T Consensus 356 ~g~~~~~~~~~~~~-~rv~~v~~~g~~~~~a~~~~~~~~~~i~~~~~~~r~dig~ 409 (417)
T 2ip4_A 356 AGTRREGGRLVSAG-GRVLNVVGLGRDLKEALERAYAYIPQVGFPGAVYRRDIGR 409 (417)
T ss_dssp SSEEESSSSEEECS-SEEEEEEEEESSHHHHHHHHHHHGGGSBCTTCBCCSCTTH
T ss_pred CceEeeCCeEEecC-CcEEEEEEEcCCHHHHHHHHHHHHhcCccCCcEEccchhh
Confidence 455432 122 33899999999999999999999999999995 677764
No 43
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=395.00 Aligned_cols=394 Identities=14% Similarity=0.201 Sum_probs=292.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHH-HHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCE
Q psy15244 55 KTMEKILIANRSEVAIRVARAC-NEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDA 133 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa-~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDa 133 (1427)
.|++||||+|+|.....+++.+ +++|++++++....+ ++. ..++ ...+. .+|.|.+.|+++|+++++|+
T Consensus 22 ~m~~~IlIlG~g~r~~al~~~~a~~~g~~~v~~~~~~~--~~~-~~~~-~~~~~------~~~~d~~~l~~~~~~~~~d~ 91 (452)
T 2qk4_A 22 SMAARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNA--GTA-CSEK-ISNTA------ISISDHTALAQFCKEKKIEF 91 (452)
T ss_dssp CCSEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECCG--GGS-BSSS-EEECC------CCSSCHHHHHHHHHHHTCCE
T ss_pred ccCcEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCh--hhh-hhcc-ccccc------cCCCCHHHHHHHHHHcCCCE
Confidence 3567999999997666666654 668999877765433 222 3333 32332 25788999999999999999
Q ss_pred EEeCCCcccccH---HHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCc
Q psy15244 134 IHPGYGFLSERE---DFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFP 210 (1427)
Q Consensus 134 I~pg~gflsE~~---~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyP 210 (1427)
|+|+. |+. .+++.|++.|++++||++++++.++||..+|++++++|||+|++. .+.+.+++.++++++|||
T Consensus 92 V~~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~--~~~~~~~~~~~~~~~g~P 165 (452)
T 2qk4_A 92 VVVGP----EAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQWK--AFTKPEEACSFILSADFP 165 (452)
T ss_dssp EEECS----SHHHHTTHHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHTTCCBCCEE--EESSHHHHHHHHHHCSSC
T ss_pred EEECC----cHHHHHHHHHHHHhcCCcEeCcCHHHHHHhcCHHHHHHHHHHCCCCCCCeE--EECCHHHHHHHHHhCCCC
Confidence 99975 443 577888999999999999999999999999999999999999987 688999999999999999
Q ss_pred -EEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccC--CCcEEEEeeccCCceEEEEEEecccccEEEeee-ecc-
Q psy15244 211 -VILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFG--KDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYE-RDC- 285 (1427)
Q Consensus 211 -vVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg--~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~e-rd~- 285 (1427)
+||||..|+||+||++|++.+|+.++++.+... ..|| +..++||+||+ |+|++|.++.|+. .++++.. ++.
T Consensus 166 ~vvvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-G~E~sv~~~~dG~-~~~~~~~~~~~~ 241 (452)
T 2qk4_A 166 ALVVKASGLAAGKGVIVAKSKEEACKAVQEIMQE--KAFGAAGETIVIEELLD-GEEVSCLCFTDGK-TVAPMPPAQDHK 241 (452)
T ss_dssp EEEEEESBC---CCEEECSSHHHHHHHHHHHTTC---------CCEEEEECCC-SEEEEEEEEECSS-CEEECCCBEEEE
T ss_pred eEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCC-CCeEEEEEEECCC-EEEEcceeeecc
Confidence 999999999999999999999999999876432 2244 36899999999 8999999998643 3544432 110
Q ss_pred cc-----ccccceEEEEccCCCCCHHHHHHHH-HHHHHHHHHc-----CCCCeEEEEEEEcCCCcEEEEeeCCCCCCc-h
Q psy15244 286 SM-----QRRYQKVIQIAPAQDMSVSVRDAIT-ETSVRLAKSL-----GYSNAGTVEFLLDKDDNFYFIEVNPRLQVE-H 353 (1427)
Q Consensus 286 s~-----qr~~qk~ie~aPa~~l~~e~~~~l~-~~a~~l~~al-----g~~G~~~VEflvd~dG~~yfIEINpRl~ge-~ 353 (1427)
.. ..........+|++.++++..+++. +.+.+++++| +|.|++++||+++++| +||||||||+++. +
T Consensus 242 ~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~~~~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~~~~~~ 320 (452)
T 2qk4_A 242 RLLEGDGGPNTGGMGAYCPAPQVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTKNG-PKVLEFNCRFGDPEC 320 (452)
T ss_dssp EEETTTEEEEEEEEEEEESCTTCCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEEETTE-EEEEEEESSCCTTTH
T ss_pred cccCCCCCCCCCCceeeccCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEeccCCCcHH
Confidence 00 0112234466888668999888886 5777777664 6789999999999988 9999999999976 4
Q ss_pred hHHHHHhCCCHHHHHHHHHcCCCCccccccccCcc-cceE-EEEEEeecCCCCCccCCCCC-ceeeeeCCCCCcccccCC
Q psy15244 354 TLSEEITGIDVVQSQIKIAQGKSLTELGLCQEKIT-PQGC-AIQCHLRTEDPKRNFQPSTG-RLDVFTDPASIGIRVDSS 430 (1427)
Q Consensus 354 ~vte~~tGiDLv~~~i~iA~G~~l~~l~l~q~~i~-~~g~-ai~~ri~aedp~~~f~P~~G-~i~~~~~p~~~gvr~d~~ 430 (1427)
......+|+|+++.+++++.|. +++.. +. ..++ ++.++++++++.. .|..| .|..+..+..+++++.
T Consensus 321 ~~i~~~~g~d~~~~~~~~~~g~-l~~~~-----~~~~~~~~a~~~~l~~~g~~~--~~~~g~~i~~l~~~~~~~v~~~-- 390 (452)
T 2qk4_A 321 QVILPLLKSDLYEVIQSTLDGL-LCTSL-----PVWLENHTALTVVMASKGYPG--DYTKGVEITGFPEAQALGLEVF-- 390 (452)
T ss_dssp HHHGGGBCSCHHHHHHHHHTTC-GGGGC-----CCBCTTCEEEEEEEECTTTTS--SCCCSCBCBCHHHHHHTTCEEE--
T ss_pred HHHHHHhCCCHHHHHHHHHcCC-CCccc-----ceecCCCcEEEEEEECCCCCC--CCCCCCcccCccccCCCCcEEE--
Confidence 3355668999999999999986 44321 22 2245 8889999876532 45666 4554433222455543
Q ss_pred CcCCCceec----ccCccceEEEEEEcCCHHHHHHHHHHHhhccEEccc--ccCHHH
Q psy15244 431 CPYPGLQIS----PDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSGV--TTNLPF 481 (1427)
Q Consensus 431 ~~~~G~~I~----~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv--~tni~~ 481 (1427)
..|..++ ......+++|+++|+|+++|+++++++++.++++|. +++|..
T Consensus 391 --~~G~~~~~~~~~~~~~rv~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~~r~di~~ 445 (452)
T 2qk4_A 391 --HAGTALKNGKVVTHGGRVLAVTAIRENLISALEEAKKGLAAIKFEGAIYRKDIGF 445 (452)
T ss_dssp --ESSEEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHHHCBCTTCBCCSCTTH
T ss_pred --ECcEEeeCCeEEecCCeEEEEEEecCCHHHHHHHHHHHHhhcccCCcEEchhcch
Confidence 2455542 112234799999999999999999999999999995 677753
No 44
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=100.00 E-value=5.9e-38 Score=376.90 Aligned_cols=361 Identities=16% Similarity=0.212 Sum_probs=286.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 56 TMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
+.++|+|+|+|.++.+++++|+++|+++++++.+++ ++...++|+.+.. +|.|.+.+.+++++ +|+|.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~--~~~~~~ad~~~~~--------~~~d~~~l~~~~~~--~dvI~ 80 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN--SPCAQVADIEIVA--------SYDDLKAIQHLAEI--SDVVT 80 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT--CTTTTTCSEEEEC--------CTTCHHHHHHHHHT--CSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC--CchHHhCCceEec--------CcCCHHHHHHHHHh--CCEee
Confidence 457999999999999999999999999999977665 5677889988764 47889999999986 78886
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEee
Q psy15244 136 PGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKA 215 (1427)
Q Consensus 136 pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP 215 (1427)
+++ ......+++.+++.|+ +||++++++.+.||..+|++++++|||+|++. .+.+.+++.++++++|||+||||
T Consensus 81 ~~~--e~~~~~~~~~l~~~g~--~~~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~~~~g~P~vvKp 154 (389)
T 3q2o_A 81 YEF--ENIDYRCLQWLEKHAY--LPQGSQLLSKTQNRFTEKNAIEKAGLPVATYR--LVQNQEQLTEAIAELSYPSVLKT 154 (389)
T ss_dssp ESC--CCCCHHHHHHHHHHSC--CTTCSHHHHHTTSHHHHHHHHHHTTCCCCCEE--EESSHHHHHHHHHHHCSSEEEEE
T ss_pred ecc--ccccHHHHHHHHhhCc--cCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeE--EECCHHHHHHHHHhcCCCEEEEe
Confidence 554 4456678888988886 79999999999999999999999999999987 78999999999999999999999
Q ss_pred cCCCC-CcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccceE
Q psy15244 216 AFGGG-GRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKV 294 (1427)
Q Consensus 216 ~~GgG-GrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~ 294 (1427)
..|++ |+|++++++.+||.++++.+. +.++++|+||++++|++|.++.|.+|+++.+...++ .++.+...
T Consensus 155 ~~~~~~g~Gv~~v~~~~el~~~~~~~~--------~~~~lvEe~i~g~~E~~v~~~~~~~G~~~~~~~~e~-~~~~g~~~ 225 (389)
T 3q2o_A 155 TTGGYDGKGQVVLRSEADVDEARKLAN--------AAECILEKWVPFEKEVSVIVIRSVSGETKVFPVAEN-IHVNNILH 225 (389)
T ss_dssp SSCCSSSCCEEEESSGGGHHHHHHHHH--------HSCEEEEECCCCSEEEEEEEEECTTCCEEECCCEEE-EEETTEEE
T ss_pred CCCCCCCCCeEEECCHHHHHHHHHhcC--------CCCEEEEecccCceEEEEEEEEcCCCCEEEecCeee-EEcCCceE
Confidence 99975 899999999999999887642 368999999997799999999998888776543322 33334445
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcC
Q psy15244 295 IQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQG 374 (1427)
Q Consensus 295 ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G 374 (1427)
....|+ .++++..+++.+.+.++++++|+.|++++||+++++|++||+|||||++++.+++..++|+|+++.+++.++|
T Consensus 226 ~~~~p~-~l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~dg~~~viEiNpR~~~s~~~~~~~~g~~~~~~~~r~~lg 304 (389)
T 3q2o_A 226 ESIVPA-RITEELSQKAIAYAKVLADELELVGTLAVEMFATADGEIYINELAPRPHNSGHYTQDACETSQFGQHIRAICN 304 (389)
T ss_dssp EEEESC-SSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHT
T ss_pred EEECCC-CCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCCEEEEEeeCCCCCchhHHHHHcCCCHHHHHHHHHcC
Confidence 556777 5999999999999999999999999999999999889999999999999998888899999999999999999
Q ss_pred CCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeee-eCCCCCcccccCCCcCCCceecccCccceEEEEEEc
Q psy15244 375 KSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVF-TDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHT 453 (1427)
Q Consensus 375 ~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~-~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G 453 (1427)
.+|+++.+. ..++...+..... .+....+ ..| +..+++. + .. ...+ ....|+|++.|
T Consensus 305 ~~l~~~~~~-------~~~~~~~~~g~~~-------~~~~~~~~~~p-~~~~~ly-g--k~--~~~~--~r~~G~v~~~~ 362 (389)
T 3q2o_A 305 LPLGETNLL-------KPVVMVNILGEHI-------EGVLRQVNRLT-GCYLHLY-G--KE--EAKA--QRKMGHVNILN 362 (389)
T ss_dssp CCCCCCCBC-------SCEEEEEEEHHHH-------HHHHHTGGGCT-TEEEEEC-C--CS--SCCT--TSEEEEEEEEC
T ss_pred CCCCCcccc-------CcEEEEEEecCch-------hhHHHHHHhCC-CCEEEEC-C--CC--CCCC--CCeeEEEEEEc
Confidence 998753321 1133333332110 0000111 111 1122222 1 00 0111 12289999999
Q ss_pred CCHHHHHHHHHHH
Q psy15244 454 ATYKSSCEKMRRA 466 (1427)
Q Consensus 454 ~~~~eA~~r~~ra 466 (1427)
+|.++|++++..+
T Consensus 363 ~~~~~a~~~a~~~ 375 (389)
T 3q2o_A 363 DNIEVALEKAKSL 375 (389)
T ss_dssp SSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHh
Confidence 9999999998765
No 45
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=100.00 E-value=3.2e-39 Score=384.33 Aligned_cols=361 Identities=15% Similarity=0.163 Sum_probs=242.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEe
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHP 136 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~p 136 (1427)
|+||||+|+|.++.+++++++++|+++++++++++ ++...++|+.+..+ .+.+++ .++|+|++
T Consensus 1 M~~Ililg~g~~~~~~~~a~~~~G~~v~~~~~~~~--~~~~~~~~~~~~~~-------------~l~~~~--~~~d~v~~ 63 (365)
T 2z04_A 1 MLTVGILGGGQLGWMTILEGRKLGFKFHVLEDKEN--APACRVADRCFRTG-------------QISEFV--DSCDIITY 63 (365)
T ss_dssp -CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSSS--CHHHHHSSEEECGG-------------GHHHHH--HHCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC--CchhhhccceeeHH-------------HHHHHh--hcCCEEEE
Confidence 57999999999999999999999999999987655 44567788776421 677777 56999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeec
Q psy15244 137 GYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAA 216 (1427)
Q Consensus 137 g~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~ 216 (1427)
+++... ..+++.++. ++||++++++.++||..+|++++++|||+|++. .+. .+++.++++++|||+||||.
T Consensus 64 ~~e~~~--~~~~~~l~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~--~~~-~~~~~~~~~~~~~P~vvKp~ 134 (365)
T 2z04_A 64 EFEHIK--DEVLEKCES----KLIPNPQALYVKKSRIREKLFLKKHGFPVPEFL--VIK-RDEIIDALKSFKLPVVIKAE 134 (365)
T ss_dssp SSSCCC--HHHHHHHTT----TBSSCTHHHHHHTCHHHHHHHHHTTTCCCCCEE--EC---------------CEEEECC
T ss_pred CCCCCc--HHHHHHHhh----hcCCCHHHHHHhhCHHHHHHHHHHcCCCCCCEE--EEc-HHHHHHHHHhcCCCEEEEEc
Confidence 886433 235565543 679999999999999999999999999999987 566 88888888999999999999
Q ss_pred CCC-CCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccceEE
Q psy15244 217 FGG-GGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQKVI 295 (1427)
Q Consensus 217 ~Gg-GGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk~i 295 (1427)
.|+ ||+||+++++.+|+.++++.+. ++..+++|+||++++|++++++.|++|+++.+...++ .++.+....
T Consensus 135 ~~~~~g~Gv~~v~~~~el~~~~~~~~-------~~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~~~~~~-~~~~~~~~~ 206 (365)
T 2z04_A 135 KLGYDGKGQYRIKKLEDANQVVKNHD-------KEESFIIEEFVKFEAEISCIGVRDREGKTYFYPQPFN-KHEEGILIY 206 (365)
T ss_dssp -------------------------------------CEEEECCCCSEEEEEEEEECTTCCEEECCEEEE-EEETTEEEE
T ss_pred CCCcCCCCeEEECCHHHHHHHHHHhc-------cCCCEEEEccCCCCEEEEEEEEECCCCCEEEECCEEE-EEeCCEeEE
Confidence 999 9999999999999999887653 2578999999998899999999998888876644333 233444445
Q ss_pred EEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcCC
Q psy15244 296 QIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQGK 375 (1427)
Q Consensus 296 e~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G~ 375 (1427)
...|++ + .+++.+.+.++++++||+|.+++||+++++|++||||+|||+++....+...+|+|+++.+++.++|.
T Consensus 207 ~~~p~~-~----~~~~~~~~~~~~~~lg~~G~~~vd~~~~~~g~~~~iEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~g~ 281 (365)
T 2z04_A 207 NYVPYA-K----LKEAEEITKRLMELLDIVGVFTVEFFLLKDGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEM 281 (365)
T ss_dssp EEEEEE-C----CHHHHHHHHHHHHHTTCCEEEEEEEEECTTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHTTC
T ss_pred EECCHh-H----HHHHHHHHHHHHHHcCCEEEEEEEEEEeCCCcEEEEEeccCcCCCceEEeeccccCHHHHHHHHHhCC
Confidence 667774 3 57789999999999999999999999998899999999999997533477889999999999999999
Q ss_pred CCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEEcCC
Q psy15244 376 SLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHTAT 455 (1427)
Q Consensus 376 ~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G~~ 455 (1427)
+++.... . .+ ++.++++++++. | +.+..+. ..+++++. .+ |..+ ..++.+|+|+++|+|
T Consensus 282 ~l~~~~~-----~-~~-~~~~~~~~~~~~----~--~~~~~~~--~~~~~~~~---~~-g~~~--~~~~~lg~v~~~g~~ 340 (365)
T 2z04_A 282 PLGSTEL-----K-LP-SGMVNILGKSYE----E--IPLKEIL--SVEGAKLY---WY-GKEK--KPRRKVGHVNVVGRS 340 (365)
T ss_dssp CCCCCCB-----S-SC-EEEEEEESCCGG----G--SCHHHHT--TSTTEEEE---EC-CCCC--CTTCEEEEEEEECSS
T ss_pred CCCCccc-----c-CC-EEEEEEECCccc----c--chHHHHh--cCCCCEEE---ec-CCCC--CCCCeEEEEEEecCC
Confidence 9864321 1 22 667888887631 2 3333332 22343332 12 4422 236779999999999
Q ss_pred HHHHHHHHHHHhhccEEccccc
Q psy15244 456 YKSSCEKMRRALEETQVSGVTT 477 (1427)
Q Consensus 456 ~~eA~~r~~raL~e~~I~Gv~t 477 (1427)
+++|+++++++++.++++|++-
T Consensus 341 ~~~a~~~~~~~~~~i~~~~~~~ 362 (365)
T 2z04_A 341 KEEVVEKVERVFTLLKGSREKL 362 (365)
T ss_dssp HHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHhhhccCCC
Confidence 9999999999999999999864
No 46
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=1.2e-38 Score=385.85 Aligned_cols=379 Identities=13% Similarity=0.091 Sum_probs=283.6
Q ss_pred CCCEEEEEcCCHHHHHHHHH-HHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 56 TMEKILIANRSEVAIRVARA-CNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riira-a~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
+.+||||+|+|.....++.+ ++++| +++++.. ++....+|+. + |.+.|+++|++.++|+|
T Consensus 14 ~~~~vlviG~Ggr~~a~a~~~a~~~g-~v~~~~~-----np~~~~~d~~--i-----------d~~~l~~~~~~~~~d~V 74 (412)
T 1vkz_A 14 KAVRVHILGSGGREHAIGWAFAKQGY-EVHFYPG-----NAGTKRDGTN--H-----------PYEGEKTLKAIPEEDIV 74 (412)
T ss_dssp --CEEEEEECSHHHHHHHHHHHHTTC-EEEEEEC-----CTTGGGTSEE--C-----------CCCTHHHHHTSCSSCEE
T ss_pred ccCEEEEECCCHHHHHHHHHHHhCCC-CEEEECC-----Chhhhccccc--C-----------CHHHHHHHHHHcCCCEE
Confidence 35699999999555454544 57889 8877732 2344566654 2 35789999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEe
Q psy15244 135 HPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILK 214 (1427)
Q Consensus 135 ~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVK 214 (1427)
+|+. |++.++..++.++. ++||++++++.++||..+|++|+++|||+|++. .+.+.+++.++++++|||+|||
T Consensus 75 ~~~~----E~~~~a~~~~~l~~-~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~--~~~~~~e~~~~~~~~g~PvvvK 147 (412)
T 1vkz_A 75 IPGS----EEFLVEGVSNWRSN-VFGPVKEVARLEGSKVYAKRFMKKYGIRTARFE--VAETPEELREKIKKFSPPYVIK 147 (412)
T ss_dssp CCSS----GGGTCC-----CTT-BSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEE--EESSHHHHHHHHTTSCSSEEEE
T ss_pred EECC----cHHHHHHHHHHhhh-hhCCCHHHHHHhcCHHHHHHHHHHcCCCCCCEE--EECCHHHHHHHHHhcCCCEEEE
Confidence 9963 56555678888887 789999999999999999999999999999986 6899999999999999999999
Q ss_pred ecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCC-CcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccc---
Q psy15244 215 AAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGK-DDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRR--- 290 (1427)
Q Consensus 215 P~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~-~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~--- 290 (1427)
|..|+||+||++|++.+|+.++++.+.... ..|++ +.++|||||+ |+|++|+++.|++ .++.+. ..+..++.
T Consensus 148 p~~~~gg~Gv~~v~~~~el~~a~~~~~~~~-~~~g~~~~vlvEe~i~-G~E~sv~~~~dg~-~~~~~~-~~~~~~~~~~~ 223 (412)
T 1vkz_A 148 ADGLARGKGVLILDSKEETIEKGSKLIIGE-LIKGVKGPVVIDEFLA-GNELSAMAVVNGR-NFVILP-FVRDYKRLMDG 223 (412)
T ss_dssp ESSCCSSCCEEEESSHHHHHHHHHHHHHTS-SSTTCCSCEEEEECCC-SEEEEEEEEEETT-EEEECC-CCEECCEEETT
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHhhc-cccCCCCeEEEEECCc-CcEEEEEEEECCC-EEEEee-eeEeeeeccCC
Confidence 999999999999999999999998775431 03543 5899999999 8999999999754 333332 12222222
Q ss_pred -----cceEEEEccCCCCCHHHHHHHHHHHHHHHHHc-----CCCCeEEEEEEEcCCCcEEEEeeCCCCCCc-hhHHHHH
Q psy15244 291 -----YQKVIQIAPAQDMSVSVRDAITETSVRLAKSL-----GYSNAGTVEFLLDKDDNFYFIEVNPRLQVE-HTLSEEI 359 (1427)
Q Consensus 291 -----~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~al-----g~~G~~~VEflvd~dG~~yfIEINpRl~ge-~~vte~~ 359 (1427)
...+.+++|++ ++++.++++.+.+.+++++| +|.|++++||+++++| +||||||||+++. +..++..
T Consensus 224 ~~~~~~g~~~~~~P~~-l~~~~~~~i~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~~~~~ 301 (412)
T 1vkz_A 224 DRGPNTGGMGSWGPVE-IPSDTIKKIEELFDKTLWGVEKEGYAYRGFLYLGLMLHDGD-PYILEYNVRLGDPETEVIVTL 301 (412)
T ss_dssp TEEEECSCSEEEECCC-CCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTHHHHHHHH
T ss_pred CCCCCCCCceEEECCC-CCHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEEECCC-cEEEEEecCCCCCcceeehhh
Confidence 12345778997 99999999999999999999 8899999999999988 9999999999965 6667777
Q ss_pred hCCCHHHHHHHHHcCCCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceec
Q psy15244 360 TGIDVVQSQIKIAQGKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQIS 439 (1427)
Q Consensus 360 tGiDLv~~~i~iA~G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~ 439 (1427)
+|+|+.+.+++++.|. ++++. . ..+++ .|+++++++. .+.|..|.+..+..|+ .+++. +....+..+.
T Consensus 302 ~g~d~~~~~~~~~~g~-l~~~~-----~-~~~~a-~~~~l~~~~~-~~~~~~g~~i~l~~~~--~v~~~-g~~~~~~~~~ 369 (412)
T 1vkz_A 302 NPEGFVNAVLEGYRGG-KMEPV-----E-PRGFA-VDVVLAARGY-PDAPEKGKEITLPEEG--LIFFA-GVAEKDGKLV 369 (412)
T ss_dssp CHHHHHHHHHHHHHTS-CCCCC-----C-CCSEE-EEEEEECTTT-TTSCCCCCBCBCCSSC--CEEES-SEEEETTEEE
T ss_pred cCCCHHHHHHHHhcCC-Ccccc-----c-cCCeE-EEEEEecCCC-CCCCCCCCEeeeCCCC--cEEEC-cccccCCeEE
Confidence 9999999999999886 43221 1 12455 4677766532 2446677643343332 23322 1111122233
Q ss_pred ccCccceEEEEEEcCCHHHHHHHHHHHhhccEEccc--ccCH
Q psy15244 440 PDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSGV--TTNL 479 (1427)
Q Consensus 440 ~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv--~tni 479 (1427)
.. ++.+|+|+++|+|+++|++++++++++++++|+ +++|
T Consensus 370 ~~-~~~vg~v~~~g~~~~ea~~~~~~~~~~i~~~g~~~r~di 410 (412)
T 1vkz_A 370 TN-GGRVLHCMGTGETKEEARRKAYELAEKVHFEGKTYRRDI 410 (412)
T ss_dssp EC-SSEEEEEEEEESSHHHHHHHHHHHHHHCBCTTCBCCTTC
T ss_pred eC-CCcEEEEEEeCCCHHHHHHHHHHHhcceeeCCCEecCCC
Confidence 33 456999999999999999999999999999996 5554
No 47
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=100.00 E-value=3.6e-38 Score=372.85 Aligned_cols=336 Identities=12% Similarity=0.145 Sum_probs=269.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEe
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHP 136 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~p 136 (1427)
||||+|+|+|+.+++++.+|+++|+++ ++.+++ ++. +. .+ + ++|+|+|
T Consensus 1 Mk~igilGgGqlg~m~~~aa~~lG~~v--~~~~~~--a~~-------~~-----------~~------l----~~d~it~ 48 (355)
T 3eth_A 1 MKQVCVLGNGQLGRMLRQAGEPLGIAV--WPVGLD--AEP-------AA-----------VP------F----QQSVITA 48 (355)
T ss_dssp CCEEEEESCSHHHHHHHHHHGGGTCEE--EEECTT--CCG-------GG-----------CC------C----TTSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEE--ECCCCC--CCc-------eE-----------Ec------c----cCCEEEE
Confidence 578999999999999999999999998 343333 221 01 11 1 7999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeec
Q psy15244 137 GYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAA 216 (1427)
Q Consensus 137 g~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~ 216 (1427)
.+++++.. +++.+++.| ++||++++++.+.||..+|++++++|||+|++. .+.+.+++.++++++|||+||||+
T Consensus 49 e~e~v~~~--~l~~l~~~~--~v~p~~~a~~~~~DK~~~k~~l~~~GIptp~~~--~v~~~~e~~~~~~~~G~P~VvKp~ 122 (355)
T 3eth_A 49 EIERWPET--ALTRQLARH--PAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQ--LLAERSEWPAVFDRLGELAIVKRR 122 (355)
T ss_dssp SCSCCCCC--HHHHHHHTC--TTBTTTTHHHHHHSHHHHHHHHHHTTCCBCCEE--EECCGGGHHHHHHHHCSEEEEEES
T ss_pred CcCCcCHH--HHHHHHhcC--CcCCCHHHHHHhcCHHHHHHHHHHCccCCCCEE--EECCHHHHHHHHHHcCCCEEEEec
Confidence 99998754 577888887 579999999999999999999999999999987 789999999999999999999999
Q ss_pred CC-CCCcCeEEecC--HHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccce
Q psy15244 217 FG-GGGRGMRMVAN--KDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQK 293 (1427)
Q Consensus 217 ~G-gGGrGV~iV~s--~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk 293 (1427)
.+ +||+|+++|++ .+||.+++ ++ .+++|+||++++|++|++++|.+|+++++. ..+.+++.+..
T Consensus 123 ~~G~~GkGv~~v~~~~~~el~~a~----------~~--~vivEe~I~~~~Eisv~v~~~~~G~~~~~p-~~e~~~~~g~~ 189 (355)
T 3eth_A 123 TGGYDGRGQWRLRANETEQLPAEC----------YG--ECIVEQGINFSGEVSLVGARGFDGSTVFYP-LTHNLHQDGIL 189 (355)
T ss_dssp SSCCTTTTEEEEETTCGGGSCGGG----------TT--TEEEEECCCCSEEEEEEEEECTTSCEEECC-CEEEEEETTEE
T ss_pred CCCCCCCeEEEEcCCCHHHHHHHh----------hC--CEEEEEccCCCcEEEEEEEEcCCCCEEEEC-CEEEEeeCCeE
Confidence 85 78999999999 99988743 33 699999999889999999999888877542 22345555554
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHc
Q psy15244 294 VIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQ 373 (1427)
Q Consensus 294 ~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~ 373 (1427)
.....|+ .++++.++++.+.+.+++++|||.|+++|||++++ +++||+|||||+++++++|...+++|+++++++.++
T Consensus 190 ~~~~~pa-~l~~~~~~~~~~~a~~i~~aLg~~G~~~vEf~~~~-~~~~v~EinpR~~~sg~~t~~~~~~s~fe~~~ra~~ 267 (355)
T 3eth_A 190 RTSVAFP-QANAQQQARAEEMLSAIMQELGYVGVMAMECFVTP-QGLLINELAPRVHNSGHWTQNGASISQFELHLRAIT 267 (355)
T ss_dssp EEEEECS-SCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET-TEEEEEEEESSCCGGGTTHHHHSSSCHHHHHHHHHT
T ss_pred EEEECCC-CCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEEC-CcEEEEEeeCCCCCCccEEeeeecCCHHHHHHHHHc
Confidence 4445555 69999999999999999999999999999999996 469999999999999999999999999999999999
Q ss_pred CCCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCccceEEEEEEc
Q psy15244 374 GKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYDSLLAKIIVHT 453 (1427)
Q Consensus 374 G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~Ds~l~kvi~~G 453 (1427)
|.|++++. ..+.++.+.|..++. .-.....|+ ..+++.+ ....+ ...+|+|++.|
T Consensus 268 G~pl~~~~-------~~~~~~m~nilg~~~---------~~~~~~~p~-~~~~~yg------k~~r~--~rkmGhv~~~~ 322 (355)
T 3eth_A 268 DLPLPQPV-------VNNPSVMINLIGSDV---------NYDWLKLPL-VHLHWYD------KEVRP--GRKVGHLNLTD 322 (355)
T ss_dssp TCCCCCCC-------CCSCEEEEEEESCCC---------CGGGGGSTT-CEEEECC------CCCCT--TCEEEEEEEEC
T ss_pred CCCCCCcc-------ccCceEEEEEecchH---------HHHHHhCCC-CEEEEcC------CCCCC--CCeeEEEEEEc
Confidence 99986432 233366677776541 111112222 2344441 12222 34499999999
Q ss_pred CCHHHHHHHHHHHhhcc
Q psy15244 454 ATYKSSCEKMRRALEET 470 (1427)
Q Consensus 454 ~~~~eA~~r~~raL~e~ 470 (1427)
.|.+++++++.++.+.+
T Consensus 323 ~~~~~~~~~~~~~~~~~ 339 (355)
T 3eth_A 323 SDTSRLTATLEALIPLL 339 (355)
T ss_dssp SCHHHHHHHHHHHGGGS
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998765
No 48
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=100.00 E-value=1.2e-37 Score=372.63 Aligned_cols=361 Identities=18% Similarity=0.269 Sum_probs=283.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 55 KTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
.+.++|||+|+|+++.+++++|+++|+++++++.+++ ++....||+.+.. +|.|.+.+.+++++ +|+|
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~--~p~~~~ad~~~~~--------~~~d~~~l~~~~~~--~dvi 77 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED--CPCRYVAHEFIQA--------KYDDEKALNQLGQK--CDVI 77 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT--CTTGGGSSEEEEC--------CTTCHHHHHHHHHH--CSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC--ChhhhhCCEEEEC--------CCCCHHHHHHHHHh--CCcc
Confidence 3468999999999999999999999999999977666 6777889998764 37889999999987 7888
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEe
Q psy15244 135 HPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILK 214 (1427)
Q Consensus 135 ~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVK 214 (1427)
.++++. -....+..+++.+ .++|++++++.+.||..+|++++++|||+|++. .+.+.+++.++++++|||+|||
T Consensus 78 ~~~~E~--~~~~~l~~l~~~~--~v~p~~~~~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~~~~g~P~vvK 151 (377)
T 3orq_A 78 TYEFEN--ISAQQLKLLCEKY--NIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFI--SVKESTDIDKAIETLGYPFIVK 151 (377)
T ss_dssp EESSTT--SCHHHHHHHHHHS--CCTTTTHHHHHHHSHHHHHHHHHHTTCCBCCEE--EECSSTHHHHHHHHTCSSEEEE
T ss_pred eecccc--cCHHHHHHHhhhc--CCCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeE--EECCHHHHHHHHHHcCCCEEEE
Confidence 765532 2234455555554 467999999999999999999999999999987 6889999999999999999999
Q ss_pred ecCCC-CCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccccccccce
Q psy15244 215 AAFGG-GGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCSMQRRYQK 293 (1427)
Q Consensus 215 P~~Gg-GGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s~qr~~qk 293 (1427)
|..|+ ||+|+++|++.+|+.++++.+. +..+++|+||++.+|++|.++.+.+|++..+...+. .++.+..
T Consensus 152 p~~gg~~g~Gv~~v~~~~el~~a~~~~~--------~~~~ivEe~i~g~~E~sv~~~~~~~g~~~~~~~~e~-~~~~g~~ 222 (377)
T 3orq_A 152 TRFGGYDGKGQVLINNEKDLQEGFKLIE--------TSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQEN-EHRNQIL 222 (377)
T ss_dssp ESSSCCTTTTEEEECSTTSHHHHHHHHT--------TSCEEEEECCCEEEEEEEEEEECGGGCEEECCCEEE-EEETTEE
T ss_pred eCCCCCCCCCeEEECCHHHHHHHHHhcC--------CCcEEEEccCCCCEEEEEEEEEeCCCCEEEECCEeE-EEECCEE
Confidence 99998 9999999999999999887642 378999999996699999999877788766533222 3333444
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHc
Q psy15244 294 VIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQ 373 (1427)
Q Consensus 294 ~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~ 373 (1427)
.....|+ .+++ .+++.+.+.+++++|||.|++++||+++++|++||+|||||++++..+|...+++|+++.+++.++
T Consensus 223 ~~~~~Pa-~l~~--~~~~~~~a~~i~~~lg~~G~~~ve~~~~~~g~~~v~EinpR~~~sg~~t~~~~~~s~f~~~~ra~~ 299 (377)
T 3orq_A 223 FKTIVPA-RIDK--TAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVT 299 (377)
T ss_dssp EEEEESC-SSCC--HHHHHHHHHHHHTTSCCCEEEEEEEEEETTCCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHT
T ss_pred EEEECCC-CCCH--HHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcEEEEEeeCCcCCCCcEeehhcCCCHHHHHHHHHc
Confidence 5567788 4666 789999999999999999999999999988999999999999998778878899999999999999
Q ss_pred CCCCcc-ccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCC-CcCCCceecccCccceEEEEE
Q psy15244 374 GKSLTE-LGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSS-CPYPGLQISPDYDSLLAKIIV 451 (1427)
Q Consensus 374 G~~l~~-l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~-~~~~G~~I~~~~Ds~l~kvi~ 451 (1427)
|.++++ +.+ ...++...+..++. .+.-..+..-.+..+++.+. ...+| ..+|+|++
T Consensus 300 G~pl~~~~~~-------~~~~~m~n~lg~~~-------~~~~~~~~~~~~~~~~~ygk~~~~~~--------rkmGhv~~ 357 (377)
T 3orq_A 300 GQSLPNSIEL-------LKPAVMMNLLGKDL-------DLLENEFNEHPEWHLHIYGKSERKDS--------RKMGHMTV 357 (377)
T ss_dssp TCCCCSCCCB-------SSCEEEEEEEHHHH-------HHHGGGGGGCGGGCEEECCCSSCCTT--------SEEEEEEE
T ss_pred CCCCCccccc-------cccEEEEEEeCccc-------hhHHHHHhhCCCCEEEECCCCCCCCC--------CeeEEEEE
Confidence 999864 321 22355555654321 01111111111223444411 11223 34899999
Q ss_pred EcCCHHHHHHHHHHHh
Q psy15244 452 HTATYKSSCEKMRRAL 467 (1427)
Q Consensus 452 ~G~~~~eA~~r~~raL 467 (1427)
.|+|.+++++++..-+
T Consensus 358 ~~~~~~~~~~~~~~~~ 373 (377)
T 3orq_A 358 LTNDVNQTEQDMYAKF 373 (377)
T ss_dssp ECSCHHHHHHHHHHHT
T ss_pred EcCCHHHHHHHhHHhh
Confidence 9999999999887644
No 49
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=100.00 E-value=1.5e-36 Score=369.34 Aligned_cols=399 Identities=15% Similarity=0.162 Sum_probs=288.9
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCC-EEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGI-KSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi-~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
|+||||+|.|.....+++++++.+. ..+.+.. .+ .-....++ ...+. -++.|.+.|+++|+++++|+|+
T Consensus 3 ~mkvlviG~ggre~ala~~l~~s~~v~~v~~~p-gn--~g~~~~~~-~~~~~------~~~~d~~~l~~~a~~~~id~vv 72 (431)
T 3mjf_A 3 AMNILIIGNGGREHALGWKAAQSPLADKIYVAP-GN--AGTALEPT-LENVD------IAATDIAGLLAFAQSHDIGLTI 72 (431)
T ss_dssp CEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEE-CC--HHHHHCTT-CEECC------CCTTCHHHHHHHHHHTTEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCCEEEEEC-CC--HHHhhhcc-cceec------CCcCCHHHHHHHHHHhCcCEEE
Confidence 4699999999777789999988864 3333332 11 11112222 11121 2357899999999999999999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEee
Q psy15244 136 PGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKA 215 (1427)
Q Consensus 136 pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP 215 (1427)
|+++... ...+++.+++.|++++||+++++++++||..+|++|+++|||+|++. .+++.+++.++++++|||+||||
T Consensus 73 ~g~e~~l-~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIptp~~~--~~~~~~ea~~~~~~~g~PvVvKp 149 (431)
T 3mjf_A 73 VGPEAPL-VIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQ--NFTDVEAALAYVRQKGAPIVIKA 149 (431)
T ss_dssp ECSHHHH-HTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCSBCCEE--EESCHHHHHHHHHHHCSSEEEEE
T ss_pred ECCchHH-HHHHHHHHHhcCCCeeCCCHHHHHHhhCHHHHHHHHHHcCCCCCCeE--eeCCHHHHHHHHHHcCCeEEEEE
Confidence 9864211 12478899999999999999999999999999999999999999986 78999999999999999999999
Q ss_pred cCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccC--CCcEEEEeeccCCceEEEEEEecccccEEEeeee-ccc-c----
Q psy15244 216 AFGGGGRGMRMVANKDAIEENFKRAQSEALASFG--KDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYER-DCS-M---- 287 (1427)
Q Consensus 216 ~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg--~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~er-d~s-~---- 287 (1427)
..|+||+||+++++.+|+.++++.+... ..|+ +..++|||||+ |+|++|.++.|+. +++.+... +.. .
T Consensus 150 ~~~~gg~GV~iv~~~~el~~a~~~~~~~--~~~g~~~~~vlvEe~i~-G~E~sv~~~~dg~-~~~~~~~~~~~~~~~~~~ 225 (431)
T 3mjf_A 150 DGLAAGKGVIVAMTQEEAETAVNDMLAG--NAFGDAGHRIVVEEFLD-GEEASFIVMVDGE-NVLPMATSQDHKRVGDGD 225 (431)
T ss_dssp SSSCTTCSEEEECSHHHHHHHHHHHHTT--HHHHCCCCCEEEEECCC-SEEEEEEEEEESS-CEEECCCBEECCEEETTT
T ss_pred CCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccccCCCCeEEEEEeeC-CcEEEEEEEEcCC-EEEEEEeeEeceecccCC
Confidence 9999999999999999999999887632 2343 46899999999 7999999999875 66665321 100 0
Q ss_pred -ccccceEEEEccCCCCCHHHHHHHHHH----HHHHHHHcCC--CCeEEEEEEEcCCCcEEEEeeCCCCCC-chhHHHHH
Q psy15244 288 -QRRYQKVIQIAPAQDMSVSVRDAITET----SVRLAKSLGY--SNAGTVEFLLDKDDNFYFIEVNPRLQV-EHTLSEEI 359 (1427)
Q Consensus 288 -qr~~qk~ie~aPa~~l~~e~~~~l~~~----a~~l~~alg~--~G~~~VEflvd~dG~~yfIEINpRl~g-e~~vte~~ 359 (1427)
..+...+...+|++.++++..+++.+. +.++++++|+ +|++++||+++++|++||||+|||++. +..++...
T Consensus 226 ~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~~~~~~~~~g~~~~G~~~ve~~~~~~g~~~viEiN~R~G~~~~~~i~~~ 305 (431)
T 3mjf_A 226 TGPNTGGMGAYSPAPVVTDDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYAGLMISADGQPKVIEFNCRFGDPETQPIMLR 305 (431)
T ss_dssp EEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEECTTSCEEEEEECGGGSTTTHHHHHHH
T ss_pred CCCCCCCceEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEEEeCCCCeEEEEEecCCCCcHHHHHHHH
Confidence 011122355789977999999988886 6777777665 799999999999899999999999973 24555688
Q ss_pred hCCCHHHHHHHHHcCCCCccccccccCcccceEEEEEEeecCCCCCccCCCCCc-eeeeeCCCCCccccc-CCC-cCCC-
Q psy15244 360 TGIDVVQSQIKIAQGKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGR-LDVFTDPASIGIRVD-SSC-PYPG- 435 (1427)
Q Consensus 360 tGiDLv~~~i~iA~G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~-i~~~~~p~~~gvr~d-~~~-~~~G- 435 (1427)
+|+|+++.+++++.|.. +++++.+. .++++...+ +..... -.+..|. |..+.....+++.+. .+. ...|
T Consensus 306 ~g~dl~~~~~~~~~G~l-~~~~~~~~----~~~a~~vv~-a~~gyp-~~~~~g~~i~~~~~~~~~~~~~~~ag~~~~~~~ 378 (431)
T 3mjf_A 306 MRSDLVELCLAGTQGKL-NEKTSDWD----ERPSLGVVL-AAGGYP-ADYRQGDVIHGLPQQEVKDGKVFHAGTKLNGNH 378 (431)
T ss_dssp BCSCHHHHHHHHHTTCG-GGCCCCBC----SSCEEEEEE-EETTTT-SCCCCCCBCBCCCSSCBTTEEEEESSEEECTTS
T ss_pred HCCCHHHHHHHHHcCCC-CCCCcccc----CCcEEEEEe-cCCCcC-ccCCCCCEeeCCccccCCCcEEEEeeeEecCCC
Confidence 99999999999999983 33333332 233433333 222111 1223332 332322111243222 111 1223
Q ss_pred ceecccCccceEEEEEEcCCHHHHHHHHHHHhhccEEccc--ccCHHH
Q psy15244 436 LQISPDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSGV--TTNLPF 481 (1427)
Q Consensus 436 ~~I~~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv--~tni~~ 481 (1427)
..++ .++.++.|++.|+|.++|+++++++++.++++|. +++|.+
T Consensus 379 ~~~~--~ggRv~~v~~~g~~~~~A~~~a~~~~~~i~~~~~~~r~dig~ 424 (431)
T 3mjf_A 379 EVVT--NGGRVLCVTALGETVAQAQQYAYQLAEGIQWEGVFCRKDIGY 424 (431)
T ss_dssp CEEE--CSSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEECCSCTTH
T ss_pred EEEe--cCCeEEEEEEecCCHHHHHHHHHHHhccCCCCCceeehhhHH
Confidence 3332 2456899999999999999999999999999995 778865
No 50
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=100.00 E-value=1.2e-36 Score=371.16 Aligned_cols=393 Identities=11% Similarity=0.138 Sum_probs=292.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcC-CEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 56 TMEKILIANRSEVAIRVARACNEMG-IKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa~elG-i~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
+..||||+|.|.....+++++++.+ +..+.+.. . .+....+++.+.+ ++.|.+.|+++|+++++|+|
T Consensus 20 ~~m~ilvlG~ggre~ala~~l~~s~~v~~v~~~p--g--n~g~~~~~~~~~i--------~~~d~~~l~~~a~~~~id~v 87 (442)
T 3lp8_A 20 GSMNVLVIGSGGREHSMLHHIRKSTLLNKLFIAP--G--REGMSGLADIIDI--------DINSTIEVIQVCKKEKIELV 87 (442)
T ss_dssp CCEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEE--C--CGGGTTTSEECCC--------CTTCHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCCEEEEEC--C--ChHHhhccceeec--------CcCCHHHHHHHHHHhCCCEE
Confidence 3569999999977778999998874 45555542 2 2233344554332 46889999999999999999
Q ss_pred EeCCCcccccH---HHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcE
Q psy15244 135 HPGYGFLSERE---DFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPV 211 (1427)
Q Consensus 135 ~pg~gflsE~~---~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPv 211 (1427)
+|+. |++ .+++.+++.|++++||+++++++++||..+|++|+++|||+|++. .+.+.+++.++++++|||+
T Consensus 88 v~g~----E~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~--~~~~~~ea~~~~~~~g~Pv 161 (442)
T 3lp8_A 88 VIGP----ETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKYG--YFVDTNSAYKFIDKHKLPL 161 (442)
T ss_dssp EECS----HHHHHTTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHHTCCBCCEE--EESSHHHHHHHHHHSCSSE
T ss_pred EECC----cHHHHHHHHHHHHhcCCcEecCCHHHHHHhhCHHHHHHHHHHCCCCCCCEE--EECCHHHHHHHHHHcCCcE
Confidence 9975 444 478889999999999999999999999999999999999999986 7899999999999999999
Q ss_pred EEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccC--CCcEEEEeeccCCceEEEEEEecccccEEEeee-ecccc-
Q psy15244 212 ILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFG--KDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYE-RDCSM- 287 (1427)
Q Consensus 212 VVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg--~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~e-rd~s~- 287 (1427)
||||..|+||+||+++++.+|+.++++.+... ..|+ +..++|||||+ |+|+++.++.|+. +++.+.. ++...
T Consensus 162 VvKp~~~~gg~GV~iv~~~eel~~a~~~~~~~--~~~g~~~~~vlvEe~i~-G~E~sv~~~~dg~-~~~~~~~~~~~~~~ 237 (442)
T 3lp8_A 162 VVKADGLAQGKGTVICHTHEEAYNAVDAMLVH--HKFGEAGCAIIIEEFLE-GKEISFFTLVDGS-NPVILGVAQDYKTI 237 (442)
T ss_dssp EEEESSCCTTTSEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCC-SEEEEEEEEEESS-CEEEEEEEEECCEE
T ss_pred EEeECCCCCCCeEEEeCCHHHHHHHHHHHHhh--cccCCCCCeEEEEEeec-CcEEEEEEEECCC-eEEEeEEeEeeeec
Confidence 99999999999999999999999999877631 2344 36899999999 8999999999864 4544322 11110
Q ss_pred -----ccccceEEEEccCCCCCHHHHHHHHHH----HHHHHHHcCC--CCeEEEEEEEcCCCcEEEEeeCCCCCC-chhH
Q psy15244 288 -----QRRYQKVIQIAPAQDMSVSVRDAITET----SVRLAKSLGY--SNAGTVEFLLDKDDNFYFIEVNPRLQV-EHTL 355 (1427)
Q Consensus 288 -----qr~~qk~ie~aPa~~l~~e~~~~l~~~----a~~l~~alg~--~G~~~VEflvd~dG~~yfIEINpRl~g-e~~v 355 (1427)
..+...+...+|++.++++..+++.+. +.++++++|+ .|++++||+++++| +||||+|||+++ +++.
T Consensus 238 ~~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~a~~~~~a~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~ 316 (442)
T 3lp8_A 238 GDNNKGPNTGGMGSYSKPNIITQEMEHIIIQKIIYPTIKAMFNMNIQFRGLLFAGIIIKKNE-PKLLEYNVRFGDPETQS 316 (442)
T ss_dssp EGGGEEEECSCSEEEECTTSSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTHHHH
T ss_pred ccCCCCCCCCCcEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-eEEEEEecCCCCCchhh
Confidence 111223467789977999999999887 8888899887 79999999999988 999999999994 5778
Q ss_pred HHHHhCCCHHHHHHHHHcCCCCccccccccCcccceEEEEEEeecCCCCCccCCCCC-ceeeeeC-CCCCcccccC-CC-
Q psy15244 356 SEEITGIDVVQSQIKIAQGKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTG-RLDVFTD-PASIGIRVDS-SC- 431 (1427)
Q Consensus 356 te~~tGiDLv~~~i~iA~G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G-~i~~~~~-p~~~gvr~d~-~~- 431 (1427)
+...+|.|+++.+++++.|.. +++.+.+. .++++ |.+.+..... ..+..| .|+.+.. ...+++.+.. +.
T Consensus 317 ~~~~~~~dl~~~~~~~~~G~l-~~~~~~~~----~~~a~-~vv~a~~gyp-~~~~~g~~i~g~~~~~~~~~~~~~~ag~~ 389 (442)
T 3lp8_A 317 ILPRLNSDFLKLLSLTAKGKL-GNESVELS----KKAAL-CVVVASRGYP-GEYKKNSIINGIENIEKLPNVQLLHAGTR 389 (442)
T ss_dssp HGGGBCSCHHHHHHHHHHTCC-SSCCCCBC----SCEEE-EEEEEETTTT-SSCCSSCEEBSHHHHHTCSSEEEEESSEE
T ss_pred hHHHhCCCHHHHHHHHHcCCC-CCCCceec----cCcEE-EEEEccCCCC-CCCCCCCEeeCCcccccCCCcEEEEeeee
Confidence 888899999999999999973 33222222 23343 3344433211 122333 2332221 1123332221 11
Q ss_pred cCCCceecccCccceEEEEEEcCCHHHHHHHHHHHhhccEEccc--ccCHH
Q psy15244 432 PYPGLQISPDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSGV--TTNLP 480 (1427)
Q Consensus 432 ~~~G~~I~~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv--~tni~ 480 (1427)
...|..+ . .+..++.|++.|+|.++|+++++++++.++++|. +++|.
T Consensus 390 ~~~~~~~-~-~ggRv~~v~~~g~~~~~A~~~a~~~~~~i~~~~~~~r~dig 438 (442)
T 3lp8_A 390 REGNNWV-S-DSGRVINVVAQGENLASAKHQAYAALDLLDWPDGIYRYDIG 438 (442)
T ss_dssp EETTEEE-E-CSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTEECCSCTT
T ss_pred ccCCeEE-e-cCCeEEEEEEecCCHHHHHHHHHHHhcccCCCCCcccCccC
Confidence 1122222 2 2455899999999999999999999999999995 66664
No 51
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=100.00 E-value=5.3e-36 Score=366.77 Aligned_cols=386 Identities=16% Similarity=0.205 Sum_probs=278.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHH-HHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 56 TMEKILIANRSEVAIRVARAC-NEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa-~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
+.+||||+|.|.....+++++ +++|++++++++... .....++ . +. .++.|.+.|+++|+++++|+|
T Consensus 20 ~~~~iliiG~g~r~~a~a~~~~~~~g~~~v~~~~~~~---~~~~~~~-~--~~------~~~~d~~~l~~~~~~~~~d~v 87 (451)
T 2yrx_A 20 SHMNVLVIGRGGREHAIAWKAAQSPLVGKLYVAPGNP---GIADVAE-L--VH------IDELDIEALVQFAKQQAIDLT 87 (451)
T ss_dssp SSEEEEEEECSHHHHHHHHHHHTCTTEEEEEEEECCT---TGGGTSE-E--CC------CCTTCHHHHHHHHHHTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCh---hhhhhCc-e--ec------cCCCCHHHHHHHHHHcCCCEE
Confidence 356999999996555565555 568999887765321 1223344 2 21 236789999999999999999
Q ss_pred EeCCCcccccH---HHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcE
Q psy15244 135 HPGYGFLSERE---DFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPV 211 (1427)
Q Consensus 135 ~pg~gflsE~~---~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPv 211 (1427)
+|+. |+. .+++.+++.|++++||++++++.++||..+|++|+++|||+|++. .+.+.+++.+++++++||+
T Consensus 88 i~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~--~~~~~~~~~~~~~~~~~Pv 161 (451)
T 2yrx_A 88 IVGP----EAPLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHA--AFTSYEEAKAYIEQKGAPI 161 (451)
T ss_dssp EECS----HHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCCBCCEE--EESCHHHHHHHHHHHCSSE
T ss_pred EECC----chHHHHHHHHHHHHCCCCEeCccHHHHHHhhCHHHHHHHHHHcCCCCCCeE--EECCHHHHHHHHHhcCCcE
Confidence 9975 443 467888999999999999999999999999999999999999986 6889999999999999999
Q ss_pred EEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccC--CCcEEEEeeccCCceEEEEEEecccccEEEeee--eccc-
Q psy15244 212 ILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFG--KDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYE--RDCS- 286 (1427)
Q Consensus 212 VVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg--~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~e--rd~s- 286 (1427)
||||..|+||+||++|++.+|+.++++.+... ..|+ +..++||+||+ |+|++|.++.|+ +.+.... ++..
T Consensus 162 VvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-G~E~sv~~~~dG--~~~~~~~~~~~~~~ 236 (451)
T 2yrx_A 162 VIKADGLAAGKGVTVAQTVEEALAAAKAALVD--GQFGTAGSQVVIEEYLE-GEEFSFMAFVNG--EKVYPLAIAQDHKR 236 (451)
T ss_dssp EEEECC----CCEEEESSHHHHHHHHHHHHHH--SCCBTTBCCEEEEECCC-SEEEEEEEEEET--TEEEECCCBEECCE
T ss_pred EEEeCCCCCCCcEEEECCHHHHHHHHHHHHhc--cccCCCCCeEEEEECCc-CcEEEEEEEEcC--CEEEEeeeEEeccc
Confidence 99999999999999999999999999877552 2354 37899999999 899999999874 4433321 1100
Q ss_pred c-----ccccceEEEEccCCCCCHHHHHHH-HHHHHHHHHHc-----CCCCeEEEEEEEcCCCcEEEEeeCCCCCCc-hh
Q psy15244 287 M-----QRRYQKVIQIAPAQDMSVSVRDAI-TETSVRLAKSL-----GYSNAGTVEFLLDKDDNFYFIEVNPRLQVE-HT 354 (1427)
Q Consensus 287 ~-----qr~~qk~ie~aPa~~l~~e~~~~l-~~~a~~l~~al-----g~~G~~~VEflvd~dG~~yfIEINpRl~ge-~~ 354 (1427)
. ..+........|++.++++..+++ .+.+.++++++ +|.|++++||+++++| +||||||||+++. +.
T Consensus 237 ~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~ 315 (451)
T 2yrx_A 237 AYDGDEGPNTGGMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVLYAGLMATANG-PKVIEFNARFGDPEAQ 315 (451)
T ss_dssp EETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTHHH
T ss_pred cccCCCCCCCCCCeEEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEecCCCCcHHH
Confidence 0 001122345678866899988888 66677777655 6789999999999988 9999999999976 44
Q ss_pred HHHHHhCCCHHHHHHHHHcCCCCccccccccCcccceEEEEEEeecCC-CCCccCCCCCc-eeeeeCCCCCcccccCCCc
Q psy15244 355 LSEEITGIDVVQSQIKIAQGKSLTELGLCQEKITPQGCAIQCHLRTED-PKRNFQPSTGR-LDVFTDPASIGIRVDSSCP 432 (1427)
Q Consensus 355 vte~~tGiDLv~~~i~iA~G~~l~~l~l~q~~i~~~g~ai~~ri~aed-p~~~f~P~~G~-i~~~~~p~~~gvr~d~~~~ 432 (1427)
..+..+|+|+++.+++++.|... ++ .. ..++++..++.+.. | ..|..|. |..+.... +++++.
T Consensus 316 ~i~~~~g~d~~~~~~~~~~g~~~-~~--~~----~~~~~~~~~l~~~g~p---~~~~~g~~i~~~~~~~-~~~~v~---- 380 (451)
T 2yrx_A 316 VVLPRLKTDLVEAVLAVMDGKEL-EL--EW----TDEAVLGVVLAAKGYP---GAYERGAEIRGLDRIS-PDALLF---- 380 (451)
T ss_dssp HHGGGBCSCHHHHHHHHHTTCCC-CC--CB----CSSEEEEEEEEETTTT---SSCCCCCEEBCGGGSC-TTSEEE----
T ss_pred HHHHHcCCCHHHHHHHHhcCCCC-Cc--cc----cCCceEEEEEecCCcC---CCCCCCCcCcCccccC-CCCEEE----
Confidence 45667999999999999999743 22 11 12345555554321 1 0122332 22221111 343332
Q ss_pred CCCceec----ccCccceEEEEEEcCCHHHHHHHHHHHhhccEEccc--ccCHH
Q psy15244 433 YPGLQIS----PDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSGV--TTNLP 480 (1427)
Q Consensus 433 ~~G~~I~----~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv--~tni~ 480 (1427)
..|..+. ......+|+|++.|+|+++|+++++++++.++++|. +++|.
T Consensus 381 ~~G~~~~~~~~~~~~~rvg~v~~~g~~~~ea~~~~~~~~~~i~~~~~~~r~dig 434 (451)
T 2yrx_A 381 HAGTKREGGAWYTNGGRVLLLAAKGETLAKAKEKAYEQLAAIDCDGLFYRRDIG 434 (451)
T ss_dssp ESSEEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTEECCSCTT
T ss_pred eCcccccCCeEEcCCCeEEEEEEEeCCHHHHHHHHHHHhhccccCCeEechhhh
Confidence 1233321 111355999999999999999999999999999985 66665
No 52
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=100.00 E-value=2.3e-36 Score=366.76 Aligned_cols=388 Identities=17% Similarity=0.231 Sum_probs=283.1
Q ss_pred EEEEEcCCHHHHHHHHHH-HHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEeC
Q psy15244 59 KILIANRSEVAIRVARAC-NEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHPG 137 (1427)
Q Consensus 59 kVLIagrGeia~riiraa-~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~pg 137 (1427)
||||+|+|.....+++++ +++|++++++++. + ......+| . +. .++.|.+.|+++|+++++|+|+|+
T Consensus 2 ~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~-~--~~~~~~~~-~--~~------~~~~d~~~l~~~~~~~~~d~v~~~ 69 (422)
T 2xcl_A 2 NVLIIGKGGREHTLAWKAAQSSLVENVFAAPG-N--DGMAASAQ-L--VN------IEESDHAGLVSFAKQNQVGLTIVG 69 (422)
T ss_dssp EEEEEECSHHHHHHHHHHTTCTTCSEEEEEEC-C--GGGTTTCE-E--CC------CCTTCHHHHHHHHHHTTEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEeCC-C--hhhhhhcc-c--cc------cCcCCHHHHHHHHHHcCCCEEEEC
Confidence 799999996666666665 4579998888654 2 22334555 2 21 246789999999999999999997
Q ss_pred CCcccccH---HHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEe
Q psy15244 138 YGFLSERE---DFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILK 214 (1427)
Q Consensus 138 ~gflsE~~---~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVK 214 (1427)
. |+. .+++.+++.|++++||++++++.++||..+|++++++|||+|++. .+.+.+++.++++++|||+|||
T Consensus 70 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~--~~~~~~~~~~~~~~~~~P~vvK 143 (422)
T 2xcl_A 70 P----EVPLIEGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEYE--TFTSFDEAKAYVQEKGAPIVIK 143 (422)
T ss_dssp S----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEE--EESCHHHHHHHHHHHCSSEEEE
T ss_pred C----cHHHHHHHHHHHHHCCCCEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCeE--EECCHHHHHHHHHhcCCCEEEE
Confidence 5 443 567888999999999999999999999999999999999999986 6889999999999999999999
Q ss_pred ecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccC--CCcEEEEeeccCCceEEEEEEecccccEEEeee-ec----ccc
Q psy15244 215 AAFGGGGRGMRMVANKDAIEENFKRAQSEALASFG--KDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYE-RD----CSM 287 (1427)
Q Consensus 215 P~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg--~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~e-rd----~s~ 287 (1427)
|..|+||+||+++++.+|+.++++.+... ..|+ +..+++|+||+ |+|++|.++.|+. .+..+.. ++ +..
T Consensus 144 p~~~~~g~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-g~E~sv~~~~dG~-~~~~~~~~~~~~~~~~~ 219 (422)
T 2xcl_A 144 ADGLAAGKGVTVAMTEEEAIACLHDFLED--EKFGDASASVVIEEYLS-GEEFSLMAFVKGE-KVYPMVIAQDHKRAFDG 219 (422)
T ss_dssp ESSCGGGTCEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCC-SEEEEEEEEEETT-EEEECCCBEEEEEEEGG
T ss_pred eCCCCCCCcEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCc-CcEEEEEEEEcCC-EEEecceeeeeehhcCC
Confidence 99999999999999999999999876541 1243 36899999999 8999999998753 2222211 11 000
Q ss_pred --ccccceEEEEccCCCCCHHHHHHHHH-HHHHHHHHc-----CCCCeEEEEEEEcCCCcEEEEeeCCCCCCc-hhHHHH
Q psy15244 288 --QRRYQKVIQIAPAQDMSVSVRDAITE-TSVRLAKSL-----GYSNAGTVEFLLDKDDNFYFIEVNPRLQVE-HTLSEE 358 (1427)
Q Consensus 288 --qr~~qk~ie~aPa~~l~~e~~~~l~~-~a~~l~~al-----g~~G~~~VEflvd~dG~~yfIEINpRl~ge-~~vte~ 358 (1427)
..+........|++.++++..+++.+ .+.++++++ +|.|++++||+++++| +||||+|||+++. +...+.
T Consensus 220 ~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~vd~~~~~~g-~~viEiN~R~g~~~~~~i~~ 298 (422)
T 2xcl_A 220 DKGPNTGGMGAYSPVPQISEETVRHAVETIVKPAAKAMVQEGRSFTGVLYAGLMLTENG-SKVIEFNARFGDPETQVVLP 298 (422)
T ss_dssp GEEEEEEEEEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTTHHHHGG
T ss_pred CCCCCCCCCeeEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeeEEEeCCC-cEEEEEecCCCCcHHHHHHH
Confidence 01122334667886689998888854 677777665 6789999999999988 9999999999976 444566
Q ss_pred HhCCCHHHHHHHHHcCCCCccccccccCcccceEEEEEEeecCC-CCCccCCCCCc-eeeeeCCCCCccccc-CCCcCCC
Q psy15244 359 ITGIDVVQSQIKIAQGKSLTELGLCQEKITPQGCAIQCHLRTED-PKRNFQPSTGR-LDVFTDPASIGIRVD-SSCPYPG 435 (1427)
Q Consensus 359 ~tGiDLv~~~i~iA~G~~l~~l~l~q~~i~~~g~ai~~ri~aed-p~~~f~P~~G~-i~~~~~p~~~gvr~d-~~~~~~G 435 (1427)
.+|+|+.+.+++++.|.. +++ .+ ..++++.+++.+.. |. .|..|. |..+.... +++++. .+....+
T Consensus 299 ~~g~d~~~~~~~~~~g~l-~~~--~~----~~~~~~~~~~~~~g~~~---~~~~g~~i~~~~~~~-~~~~~~~~g~~~~~ 367 (422)
T 2xcl_A 299 RMESDLVQVLLDLLDDKE-VDL--RW----KDTAAVSVVLASEGYPE---SYAKGTPIGSLAAET-EQVVVFHAGTKAEG 367 (422)
T ss_dssp GBCSCHHHHHHHHHTTCC-CCC--CB----CSCEEEEEEEEETTTTS---CCCSCCBCCCCCCCS-SSEEEEESSEEECS
T ss_pred hcCCCHHHHHHHHHcCCc-Ccc--cc----cCCceEEEEEECCCCCC---CCCCCCcccCcccCC-CCcEEEEeeeEeeC
Confidence 799999999999999863 322 11 12345555555431 11 112221 22121111 455442 1110011
Q ss_pred ceecccCccceEEEEEEcCCHHHHHHHHHHHhhccEEccc--ccCHHH
Q psy15244 436 LQISPDYDSLLAKIIVHTATYKSSCEKMRRALEETQVSGV--TTNLPF 481 (1427)
Q Consensus 436 ~~I~~~~Ds~l~kvi~~G~~~~eA~~r~~raL~e~~I~Gv--~tni~~ 481 (1427)
..+...++. +++|+++|+|+++|+++++++++.++++|. +++|..
T Consensus 368 ~~~~~~~~r-~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~~r~di~~ 414 (422)
T 2xcl_A 368 GEFVTNGGR-VANVTAFDETFEAARDRVYKAVDEIFKPGLFFRKDIGA 414 (422)
T ss_dssp SSEEECSSE-EEEEEEEESSHHHHHHHHHHHHHHHCCTTEECCSCTTH
T ss_pred CEEEeCCCc-eEEEEEEeCCHHHHHHHHHHHHhcceeCCcEecchhhH
Confidence 223334455 889999999999999999999999999994 777763
No 53
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=5.1e-36 Score=400.23 Aligned_cols=366 Identities=20% Similarity=0.344 Sum_probs=287.1
Q ss_pred CCCEEEEEcCCHH-----------HHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHH
Q psy15244 56 TMEKILIANRSEV-----------AIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIIC 124 (1427)
Q Consensus 56 ~~kkVLIagrGei-----------a~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ 124 (1427)
+.+||||+|+|++ +.+++++|+++|+++++++++++..+.+...+|+.|..+ .+.+.+++
T Consensus 558 ~~~kVlVlG~G~~riG~~~Efd~~~~~~~~al~~~G~~vi~v~~np~~~s~~~~~ad~~~~~p---------~~~e~v~~ 628 (1073)
T 1a9x_A 558 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEP---------VTLEDVLE 628 (1073)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEECCC---------CSHHHHHH
T ss_pred cCcEEEEecCCccccccccccchhHHHHHHHHHhcCCEEEEEecCCcccccccccccEEEecc---------chhhhhhh
Confidence 5679999999985 457899999999999999999988777788899887532 56899999
Q ss_pred HHHhcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHH
Q psy15244 125 IAKNNNVDAIHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFC 204 (1427)
Q Consensus 125 ia~~~~vDaI~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a 204 (1427)
+++..++|+|+|.+|... ...+++.|++.|++++||+++++..+.||..++++++++|||+|++. .+.+.+++.+++
T Consensus 629 i~~~e~~d~Vi~~~g~~~-~~~la~~Le~~Gi~i~G~~~~ai~~~~DK~~~~~ll~~~GIp~P~~~--~~~s~eea~~~~ 705 (1073)
T 1a9x_A 629 IVRIEKPKGVIVQYGGQT-PLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANA--TVTAIEMAVEKA 705 (1073)
T ss_dssp HHHHHCCSEEECSSSTHH-HHTTHHHHHHTTCCBCSSCHHHHHHHHSHHHHHHHHHHHTCCCCCEE--ECCSHHHHHHHH
T ss_pred hhhhcCcceEEeecCCch-HHHHHHHHHHCCCCeeCCCHHHHHHhhCHHHHHHHHHHcCcCCCCce--EECCHHHHHHHH
Confidence 999999999999887522 12578899999999999999999999999999999999999999987 789999999999
Q ss_pred HhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEE-eeee
Q psy15244 205 DEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVH-LYER 283 (1427)
Q Consensus 205 ~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~-l~er 283 (1427)
+++|||+||||..|+||+||++|++.+||.++++.+.. .+++.+++||+||++.+|++|++++|+.+.++. +.+.
T Consensus 706 ~~ig~PvvVKP~~~~gG~Gv~iv~~~~el~~~~~~a~~----~~~~~~vlvEefI~g~~E~~V~~l~d~~~v~~~~i~e~ 781 (1073)
T 1a9x_A 706 KEIGYPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVS----VSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEH 781 (1073)
T ss_dssp HHHCSSEEEEC-------CEEEECSHHHHHHHHHHCC------------EEEBCCTTCEEEEEEEEECSSCEEEEEEEEE
T ss_pred HHcCCCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHh----hCCCCcEEEEEccCCCcEEEEEEEEECCeEEEEeeEEE
Confidence 99999999999999999999999999999999876542 234578999999996669999999987543322 2221
Q ss_pred ccccccccceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCC
Q psy15244 284 DCSMQRRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGID 363 (1427)
Q Consensus 284 d~s~qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiD 363 (1427)
-.....+........|++.++++..+++.+.+.++++++|++|.+++||+++ +|++||||||||+++++++++.++|+|
T Consensus 782 ~~~~g~~~gd~~~~~P~~~l~~~~~~~i~~~a~~i~~aLg~~G~~~vdf~v~-~~~~~viEvNpR~~~~~~~~~~~tGi~ 860 (1073)
T 1a9x_A 782 IEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVK-NNEVYLIEVNPRAARTVPFVSKATGVP 860 (1073)
T ss_dssp SSCTTSCGGGCCEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-SSCEEEEEEECSCCTTHHHHHHHHSCC
T ss_pred EeccCCccCCceEEecCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEE-CCeEEEEEEECCCccHHHHHHHHHCcC
Confidence 1111112233456678778999999999999999999999999999999997 577999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccccccccCcccceEEEEEEeecCCCCCccCCCCCceeeeeCCCCCcccccCCCcCCCceecccCc
Q psy15244 364 VVQSQIKIAQGKSLTELGLCQEKITPQGCAIQCHLRTEDPKRNFQPSTGRLDVFTDPASIGIRVDSSCPYPGLQISPDYD 443 (1427)
Q Consensus 364 Lv~~~i~iA~G~~l~~l~l~q~~i~~~g~ai~~ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~I~~~~D 443 (1427)
+++.++++++|.+++++++.+... +.+++++++++. |..-+|. | ...| |...
T Consensus 861 l~~~~~~~~~G~~l~~~~~~~~~~-~~~~~vk~~~~~------f~~~~~~--------------d---~~lg----~~~~ 912 (1073)
T 1a9x_A 861 LAKVAARVMAGKSLAEQGVTKEVI-PPYYSVKEVVLP------FNKFPGV--------------D---PLLG----PEMR 912 (1073)
T ss_dssp HHHHHHHHHTTCCHHHHTCCSCCC-CSSEEEEEEECG------GGGCTTS--------------C---CCCC----SSCC
T ss_pred HHHHHHHHHcCCCchhcccCcCcC-CCeEEEEeccCC------cccCCCC--------------c---CCCC----Cccc
Confidence 999999999999998766644433 378899998862 2111110 0 0011 1112
Q ss_pred cceEEEEEEcCCHHHHHHHHHHHh
Q psy15244 444 SLLAKIIVHTATYKSSCEKMRRAL 467 (1427)
Q Consensus 444 s~l~kvi~~G~~~~eA~~r~~raL 467 (1427)
| .|.+++.|.|.++|..++..+.
T Consensus 913 s-tGev~g~~~~~~~a~~ka~~~~ 935 (1073)
T 1a9x_A 913 S-TGEVMGVGRTFAEAFAKAQLGS 935 (1073)
T ss_dssp C-CEEEEEEESSHHHHHHHHHHHT
T ss_pred c-cCceEEecCCHHHHHHhhHHhc
Confidence 2 5789999999999999988776
No 54
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=100.00 E-value=1.2e-32 Score=323.01 Aligned_cols=292 Identities=14% Similarity=0.167 Sum_probs=214.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHc-C-CEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCE
Q psy15244 56 TMEKILIANRSEVAIRVARACNEM-G-IKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDA 133 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa~el-G-i~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDa 133 (1427)
+.+||||+|+|.. ..+++++++. | +++++++++++ ++....+|+.+.++. ..+....+.++++++++++|+
T Consensus 3 ~~~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d~~~~--~~~~~~~d~~~~~~~----~~~~~~~~~l~~~~~~~~~d~ 75 (331)
T 2pn1_A 3 QKPHLLITSAGRR-AKLVEYFVKEFKTGRVSTADCSPL--ASALYMADQHYIVPK----IDEVEYIDHLLTLCQDEGVTA 75 (331)
T ss_dssp TCCEEEEESCTTC-HHHHHHHHHHCCSSEEEEEESCTT--CGGGGGSSSEEECCC----TTSTTHHHHHHHHHHHHTCCE
T ss_pred ccceEEEecCCch-HHHHHHHHHhcCCCEEEEEeCCCc--chhHHhhhceecCCC----CCChhHHHHHHHHHHHcCCCE
Confidence 3569999998865 5688888886 7 89998877665 455668999888751 112234899999999999999
Q ss_pred EEeCCCcccc-cHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHH--HhcCCc
Q psy15244 134 IHPGYGFLSE-REDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFC--DEVEFP 210 (1427)
Q Consensus 134 I~pg~gflsE-~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a--~~iGyP 210 (1427)
|+|+++.... .+.+++.++..|++++||+++++..+.||..++++++++|||+|++. .+.+++.+++ +.++||
T Consensus 76 vi~~~~~~~~~~a~~~~~l~~~g~~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~----~~~~~~~~~~~~~~~~~P 151 (331)
T 2pn1_A 76 LLTLIDPELGLLAQATERFQAIGVTVIVSPYAACELCFDKYTMYEYCLRQGIAHARTY----ATMASFEEALAAGEVQLP 151 (331)
T ss_dssp EEESSHHHHHHHHHTHHHHHTTTCEECCCCHHHHHHHHBHHHHHHHHHHHTCCCCCEE----SSHHHHHHHHHTTSSCSC
T ss_pred EEeCCchhHHHHHHHHHHHHhCCcEEecCCHHHHHHhhCHHHHHHHHHHcCCCCCcEE----ecHHHhhhhhhcccCCCC
Confidence 9998763221 12346677888999999999999999999999999999999999975 2567777666 478999
Q ss_pred EEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEec-ccccEEEeeeecccccc
Q psy15244 211 VILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGD-KYGDVVHLYERDCSMQR 289 (1427)
Q Consensus 211 vVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~D-g~G~vv~l~erd~s~qr 289 (1427)
+||||..|+||+|++++++.+|+.++++. ...+++|+||+ |+|+++.++.| .+|+++.++.+.+...+
T Consensus 152 ~vvKp~~g~g~~gv~~v~~~~el~~~~~~----------~~~~lvee~i~-G~e~~v~~~~d~~~G~~~~~~~~~~~~~~ 220 (331)
T 2pn1_A 152 VFVKPRNGSASIEVRRVETVEEVEQLFSK----------NTDLIVQELLV-GQELGVDAYVDLISGKVTSIFIKEKLTMR 220 (331)
T ss_dssp EEEEESBC---------------------------------CEEEEECCC-SEEEEEEEEECTTTCCEEEEEEEEEEEEE
T ss_pred EEEEeCCCCCCCCeEEeCCHHHHHHHHHh----------CCCeEEEecCC-CcEEEEEEEEecCCCeEEEEEEEEEEEec
Confidence 99999999999999999999999887653 25899999999 69999999998 77888876655443322
Q ss_pred ccceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHH
Q psy15244 290 RYQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQI 369 (1427)
Q Consensus 290 ~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i 369 (1427)
.. .. ...+.+ . .+++.+.+.++++++||.|.+++||+. .+|++||||||||+++.+.+ +..+|+|++++++
T Consensus 221 ~g-~~-~~~~~~-~----~~~~~~~~~~~~~~lg~~G~~~vd~~~-~~g~~~~iEiN~R~~g~~~~-~~~~G~~~~~~~~ 291 (331)
T 2pn1_A 221 AG-ET-DKSRSV-L----RDDVFELVEHVLDGSGLVGPLDFDLFD-VAGTLYLSEINPRFGGGYPH-AYECGVNFPAQLY 291 (331)
T ss_dssp TT-EE-EEEEEE-C----CHHHHHHHHHHHTTTCCCEEEEEEEEE-ETTEEEEEEEESSCCTTHHH-HHHTTCCHHHHHH
T ss_pred CC-ce-eEeEEe-c----cHHHHHHHHHHHHHhCCcceEEEEEEE-cCCCEEEEEEeCCCCCchHH-HHHcCCCHHHHHH
Confidence 22 12 122211 2 256888999999999999999999996 46789999999999998764 6789999999999
Q ss_pred HHHcCCCCc
Q psy15244 370 KIAQGKSLT 378 (1427)
Q Consensus 370 ~iA~G~~l~ 378 (1427)
++++|.+++
T Consensus 292 ~~~~g~~~~ 300 (331)
T 2pn1_A 292 RNLMHEINV 300 (331)
T ss_dssp HHHTTCCCC
T ss_pred HHHcCCCCC
Confidence 999999864
No 55
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=100.00 E-value=6.9e-33 Score=329.15 Aligned_cols=301 Identities=19% Similarity=0.149 Sum_probs=225.1
Q ss_pred CCEEEEEcCC-----H----HHHHHHHHHHHcCCEEEEEecCCCccCccc-----------cccceEE----EcCCCCCc
Q psy15244 57 MEKILIANRS-----E----VAIRVARACNEMGIKSVGIYSEQDKFSAHR-----------TKVDQAF----LVGKGMPP 112 (1427)
Q Consensus 57 ~kkVLIagrG-----e----ia~riiraa~elGi~~vav~s~~d~~s~~~-----------~~aDe~~----~i~~~~~~ 112 (1427)
.|||.|+-+| + .|..+++++++.||+++.|+.+.+....+. ..+|..+ .+. ....
T Consensus 3 kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 81 (357)
T 4fu0_A 3 NKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGITRSGEWYHYTGEKEKILNNTWFEDSKNLCPVVVS-QNRS 81 (357)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTCCEEEECSCTHHHHTTCGGGCGGGEEEEEEC-CCTT
T ss_pred CCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEEeCCCceeecCCCHHHhhcCcchhhhhcccccccc-cccc
Confidence 4688777433 2 245689999999999999986655321111 1111111 111 0000
Q ss_pred ccCCCCHHHHHHHHHhcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCcc
Q psy15244 113 VAAYLNIPEIICIAKNNNVDAIHPG-YGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTT 191 (1427)
Q Consensus 113 ~~~yldi~~Ii~ia~~~~vDaI~pg-~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~ 191 (1427)
...+ .+.+....+..++|+|+|. +|++.|+..++..|+.+||+|+||++.++.++.||..+|++++++|||+|++.
T Consensus 82 ~~~~--~~~~~~~~~~~~~D~vf~~l~G~~gEdg~~q~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~- 158 (357)
T 4fu0_A 82 VKGF--LEIASDKYRIIKVDLVFPVLHGKNGEDGTLQGIFELAGIPVVGCDTLSSALCMDKDRAHKLVSLAGISVPKSV- 158 (357)
T ss_dssp TCEE--EEC----CEEEECSEEEECCCSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCBCCCEE-
T ss_pred ccch--hhhhhhhHhhcCCCEEEECCcCccccCHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHCCCCCCCEE-
Confidence 0001 1233344556789999998 89999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCH---HHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEE
Q psy15244 192 EPVTDV---DKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQ 268 (1427)
Q Consensus 192 ~~v~s~---eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVq 268 (1427)
.+.+. .++.++++++|||+||||+.|+||+||++|++.+||.++++.+.. .+..+++|+||+ |+|++|+
T Consensus 159 -~~~~~~~~~~~~~~~~~lg~PvvVKP~~gg~s~Gv~~v~~~~el~~~~~~a~~------~~~~vlvE~~i~-G~e~~v~ 230 (357)
T 4fu0_A 159 -TFKRFNEEAAMKEIEANLTYPLFIKPVRAGSSFGITKVIEKQELDAAIELAFE------HDTEVIVEETIN-GFEVGCA 230 (357)
T ss_dssp -EEEGGGHHHHHHHHHHHCCSSEEEEETTCSSSTTCEEESSHHHHHHHHHHHTT------TCSEEEEEECCC-SEEEEEE
T ss_pred -eecCCChHHHHHHHHHhcCCCEEEEECCCCCCCceEEeccHHhHHHHHHHHhc------cCCeEEEEEecC-CEEEEEE
Confidence 33332 345567789999999999999999999999999999999876543 267899999998 9999999
Q ss_pred EEecccccEEEee--eeccccccccce-----EEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEE
Q psy15244 269 ILGDKYGDVVHLY--ERDCSMQRRYQK-----VIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFY 341 (1427)
Q Consensus 269 vl~Dg~G~vv~l~--erd~s~qr~~qk-----~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~y 341 (1427)
+++++.+.+..+. ...+...++.+| .....|+ .++++..+++.+.|.+++++||++|.++|||++|++|++|
T Consensus 231 vl~~~~~~~~~v~~~~~~~~~~d~~~k~~~~~~~~~~pa-~l~~~~~~~i~~~A~~~~~aLg~~G~~~VDf~~~~dg~~~ 309 (357)
T 4fu0_A 231 VLGIDELIVGRVDEIELSSGFFDYTEKYTLKSSKIYMPA-RIDAEAEKRIQEAAVTIYKALGCSGFSRVDMFYTPSGEIV 309 (357)
T ss_dssp EEESSSEEECCCEEEEECHHHHTSCSBCSSCCEEEESSC-SCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEE
T ss_pred EEecCCceEEEEEEEEcccccccccccccCCCceEecCC-CCCHHHHHHHHHHHHHHHHHhCCcceEEEEEEEeCCCCEE
Confidence 9998765443332 233344433332 3345566 6999999999999999999999999999999999999999
Q ss_pred EEeeCCCCCCc----hhHHHHHhCCCHHHHHHH
Q psy15244 342 FIEVNPRLQVE----HTLSEEITGIDVVQSQIK 370 (1427)
Q Consensus 342 fIEINpRl~ge----~~vte~~tGiDLv~~~i~ 370 (1427)
|+|||||++-. .|..-.++|+|+.+..-+
T Consensus 310 vlEvNt~PG~t~~S~~p~~~~~~G~~~~~li~~ 342 (357)
T 4fu0_A 310 FNEVNTIPGFTSHSRYPNMMKGIGLSFSQMLDK 342 (357)
T ss_dssp EEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHH
T ss_pred EEEEeCCCCCCcccHHHHHHHHhCcCHHHHHHH
Confidence 99999999743 244445689987765444
No 56
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=99.97 E-value=1.4e-30 Score=304.10 Aligned_cols=279 Identities=19% Similarity=0.218 Sum_probs=219.5
Q ss_pred CCCCEEEEEcCCH---------HHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHH
Q psy15244 55 KTMEKILIANRSE---------VAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICI 125 (1427)
Q Consensus 55 ~~~kkVLIagrGe---------ia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~i 125 (1427)
.|++||+|+.+|. .+..+++++++.|++++.++..... . ..
T Consensus 11 ~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~~------------------------~--~~---- 60 (317)
T 4eg0_A 11 KRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAERP------------------------L--SA---- 60 (317)
T ss_dssp GGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSC------------------------T--TH----
T ss_pred hhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCch------------------------H--HH----
Confidence 4677899987653 4678999999999999999733210 0 01
Q ss_pred HHhcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHH
Q psy15244 126 AKNNNVDAIHPG-YGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFC 204 (1427)
Q Consensus 126 a~~~~vDaI~pg-~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a 204 (1427)
.++.++|+|+|. .|...|+..++..++..|++++|++++++..+.||..++++++++|||+|++. .+.+.+++.+++
T Consensus 61 l~~~~~D~v~~~~hg~~ge~~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~ 138 (317)
T 4eg0_A 61 LKDEGFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPPFE--TVMRGDDYAARA 138 (317)
T ss_dssp HHHTTCCEEEECCCSGGGTSSHHHHHHHHHTCEESSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEE--EEETTSCHHHHH
T ss_pred hhhcCCCEEEEcCCCCCCchHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEE--EEECchhHHHHH
Confidence 134679999997 45556888899999999999999999999999999999999999999999987 566666676666
Q ss_pred ----HhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEe
Q psy15244 205 ----DEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHL 280 (1427)
Q Consensus 205 ----~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l 280 (1427)
+.+|||+||||..|+||+|+++|++.+||.++++.+.. .+..++||+||+.|+|++|.+++|+.+.++.+
T Consensus 139 ~~~~~~~g~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~i~~G~E~~v~vl~~~~~~~~~i 212 (317)
T 4eg0_A 139 TDIVAKLGLPLFVKPASEGSSVAVLKVKTADALPAALSEAAT------HDKIVIVEKSIEGGGEYTACIAGDLDLPLIKI 212 (317)
T ss_dssp HHHHHHHCSCEEEEECC-----CCEEECSGGGHHHHHHHHTT------TCSEEEEEECCCSSEEEEEEEETTCCCCCEEE
T ss_pred HHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------CCCeEEEEcCCCCCcEEEEEEECCcccceEEE
Confidence 88999999999999999999999999999999876532 25789999999978999999999876666665
Q ss_pred eeecc--ccccc--cceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCc----
Q psy15244 281 YERDC--SMQRR--YQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVE---- 352 (1427)
Q Consensus 281 ~erd~--s~qr~--~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge---- 352 (1427)
..... ..... ........|+ .++++..+++.+.+.++++++|++|.+++||+++++|++||||||||++-.
T Consensus 213 ~~~~~~~~~~~k~~~g~~~~~~P~-~l~~~~~~~l~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~vlEiN~~pg~t~~s~ 291 (317)
T 4eg0_A 213 VPAGEFYDYHAKYVANDTQYLIPC-GLPAEQETELKRIARRAFDVLGCTDWGRADFMLDAAGNAYFLEVNTAPGMTDHSL 291 (317)
T ss_dssp EC---------------CEEESSC-SSCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEECTTCCEEEEEEESSCCCSTTSH
T ss_pred eeCCceechhhcccCCCeeEEcCC-CCCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEeCCCCEEEEEeeCCCCCCcccH
Confidence 43221 11111 1233467788 599999999999999999999999999999999988999999999999843
Q ss_pred hhHHHHHhCCCHHHHHHHHH
Q psy15244 353 HTLSEEITGIDVVQSQIKIA 372 (1427)
Q Consensus 353 ~~vte~~tGiDLv~~~i~iA 372 (1427)
.+.....+|+|+.+...++.
T Consensus 292 ~p~~~~~~G~~~~~l~~~li 311 (317)
T 4eg0_A 292 PPKAARSIGIGYSELVVKVL 311 (317)
T ss_dssp HHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHH
Confidence 34445568999998877764
No 57
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=99.97 E-value=2e-29 Score=301.49 Aligned_cols=302 Identities=17% Similarity=0.154 Sum_probs=227.8
Q ss_pred CCEEEEEcCC---H------HHHHHHHHH-HHcCCEEEEEecCCCccCcc-------------cccc-ceEEEcCCCCCc
Q psy15244 57 MEKILIANRS---E------VAIRVARAC-NEMGIKSVGIYSEQDKFSAH-------------RTKV-DQAFLVGKGMPP 112 (1427)
Q Consensus 57 ~kkVLIagrG---e------ia~riiraa-~elGi~~vav~s~~d~~s~~-------------~~~a-De~~~i~~~~~~ 112 (1427)
++||+|+.+| | .|..+++++ ++.|++++.|+.+.+..-.. ..+. +.. + ...
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~- 77 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQNGFFLDTESSKKILALEDEQPIVDAFM---K-TVD- 77 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEECTTSCBCCHHHHHHHHTTCCHHHHHHHHH---T-SCC-
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEcCCCCEEecccccccccccchhhhccccc---c-ccc-
Confidence 3578888755 2 367799999 99999999998766431110 0011 000 0 000
Q ss_pred ccCCCCHHHHHHHHHhcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCcc
Q psy15244 113 VAAYLNIPEIICIAKNNNVDAIHPGY-GFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTT 191 (1427)
Q Consensus 113 ~~~yldi~~Ii~ia~~~~vDaI~pg~-gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~ 191 (1427)
...|.+...++. +..++|+|+|.. |...|+..++..++..|++++|++++++..+.||..+|++++++|||+|++.
T Consensus 78 ~~~~~~~~~~~~--~~~~~D~v~~~~~g~~gedg~~~~lle~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~- 154 (377)
T 1ehi_A 78 ASDPLARIHALK--SAGDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKYI- 154 (377)
T ss_dssp TTCTTCTTGGGG--TTCCCSEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHTTTCCCCCEE-
T ss_pred cccccCcchhhc--cccCCCEEEEecCCCCCcCHHHHHHHHHcCCCEeCcCHHHHHHHcCHHHHHHHHHHcCCCCCCEE-
Confidence 000111111111 235799999996 7778888889999999999999999999999999999999999999999986
Q ss_pred ccCCCHHH----HHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEE
Q psy15244 192 EPVTDVDK----VKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEV 267 (1427)
Q Consensus 192 ~~v~s~ee----a~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieV 267 (1427)
.+.+.++ +.++++.+|||+||||..|+||+||++|++.+||..+++.+.. .+..++||+||+|.+|++|
T Consensus 155 -~~~~~~~~~~~~~~~~~~~g~PvvVKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~vlvEe~I~G~~E~~v 227 (377)
T 1ehi_A 155 -VVDPESANNWSWDKIVAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQ------YDYKVLIEEAVNGARELEV 227 (377)
T ss_dssp -EECTTGGGGCCHHHHHHHHCSCEEEEESSCCTTTTEEEECSHHHHHHHHHHHTT------TCSCEEEEECCCCSCEEEE
T ss_pred -EEeccccchHHHHHHHHhcCCCEEEEeCCCCCCcCEEEeCCHHHHHHHHHHHHh------cCCcEEEEcCCCCCceEEE
Confidence 4555544 6667788999999999999999999999999999999876532 1568999999994499999
Q ss_pred EEEecccccEEEeeeeccc-------cccc---c--c-eEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEE
Q psy15244 268 QILGDKYGDVVHLYERDCS-------MQRR---Y--Q-KVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLL 334 (1427)
Q Consensus 268 qvl~Dg~G~vv~l~erd~s-------~qr~---~--q-k~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflv 334 (1427)
.+++|+++.++...+..+. +.+. + . ......|+. ++++..+++.+.+.+++++||+.|.+++||++
T Consensus 228 ~vl~~~~~~~~~~~ei~~~~~~~~~~~~d~~~k~~~g~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~ 306 (377)
T 1ehi_A 228 GVIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFQIPAQ-LSPEVTKEVKQMALDAYKVLNLRGEARMDFLL 306 (377)
T ss_dssp EEEESSSCEEEEEEEEECTTSSSSSCCCCHHHHTTCCTTCEEESSCC-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred EEEcCCCcEEEeeEEEEecCCCCcCceeCHHhcccCCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEE
Confidence 9999876666666665441 1111 1 1 245677884 99999999999999999999999999999999
Q ss_pred cCCCcEEEEeeCCCCCCch----hHHHHHhCCCHHHH---HHHHHcC
Q psy15244 335 DKDDNFYFIEVNPRLQVEH----TLSEEITGIDVVQS---QIKIAQG 374 (1427)
Q Consensus 335 d~dG~~yfIEINpRl~ge~----~vte~~tGiDLv~~---~i~iA~G 374 (1427)
+++|++||+|||||++... +....++|+|+.+. ++..|++
T Consensus 307 ~~~g~~~vlEiN~rpg~t~~s~~p~~~~a~G~~~~~l~~~li~~al~ 353 (377)
T 1ehi_A 307 DENNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDMLIDYGFE 353 (377)
T ss_dssp CTTCCEEEEEEESSCCCSTTCGGGTGGGGGTCCHHHHHHHHHHHHHH
T ss_pred eCCCCEEEEEEeCCCCCCcccHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 9889999999999999652 33344799999554 5555554
No 58
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=99.97 E-value=1.5e-29 Score=292.67 Aligned_cols=273 Identities=19% Similarity=0.303 Sum_probs=218.3
Q ss_pred CCCEEEEEcCCH---------HHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHH
Q psy15244 56 TMEKILIANRSE---------VAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIA 126 (1427)
Q Consensus 56 ~~kkVLIagrGe---------ia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia 126 (1427)
|++||+|++.|. .+..++++++++|+++++++.+... ... +
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~~~---~~~---------------------------~ 50 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVD---VTQ---------------------------L 50 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSC---GGG---------------------------T
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCchH---HHH---------------------------h
Confidence 356899999876 6788999999999999988765211 000 0
Q ss_pred HhcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHH---
Q psy15244 127 KNNNVDAIHPGY-GFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKE--- 202 (1427)
Q Consensus 127 ~~~~vDaI~pg~-gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~--- 202 (1427)
.+.++|+|++.. +...|+..++..++..|++++||+++++..+.||..++++++++|||+|++. .+.+. ++.+
T Consensus 51 ~~~~~d~v~~~~~~~~~e~~~~~~~~e~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gi~~p~~~--~~~~~-~~~~~~~ 127 (306)
T 1iow_A 51 KSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWV--ALTRA-EFEKGLS 127 (306)
T ss_dssp TTTTEEEEEECCCSTTTSSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCEE--EEEHH-HHHHCCC
T ss_pred hccCCCEEEEcCCCCCCcchHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCeE--EEchh-hhhccch
Confidence 124688888874 3334666778889999999999999999999999999999999999999986 45666 6666
Q ss_pred -----HHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccE
Q psy15244 203 -----FCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDV 277 (1427)
Q Consensus 203 -----~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~v 277 (1427)
++++++||+||||..|+||+|++++++.+|+.++++.+.. + +..+++|+||+ |+|++|.++. |++
T Consensus 128 ~~~~~~~~~~~~p~vvKP~~g~~~~gv~~v~~~~el~~~~~~~~~-----~-~~~~lvee~i~-g~e~~v~~~~---g~~ 197 (306)
T 1iow_A 128 DKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQ-----H-DEEVLIEKWLS-GPEFTVAILG---EEI 197 (306)
T ss_dssp THHHHHHHTTCSSEEEEETTCCTTTTCEEESSGGGHHHHHHHHTT-----T-CSEEEEEECCC-CCEEEEEEET---TEE
T ss_pred hhhhhHHhccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh-----h-CCCEEEEeCcC-CEEEEEEEEC---CCc
Confidence 7788999999999999999999999999999998876532 1 57899999999 8999999993 344
Q ss_pred EEeeeec-----cccccc--cceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCC
Q psy15244 278 VHLYERD-----CSMQRR--YQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQ 350 (1427)
Q Consensus 278 v~l~erd-----~s~qr~--~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ 350 (1427)
+.+.+.. +....+ ........|+ .++++..+++.+.+.++++++|+.|.+++||+++++|++||+|||||++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~-~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~~iEiN~rpg 276 (306)
T 1iow_A 198 LPSIRIQPSGTFYDYEAKFLSDETQYFCPA-GLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG 276 (306)
T ss_dssp CCCEEEECSSSSSCHHHHHTCSCCEEESSC-CCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEECTTSCEEEEEEESSCC
T ss_pred cceEEEEeCCCeEchhheecCCCeeEEcCC-CCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEcCCCCEEEEEecCCCC
Confidence 4443321 111111 1345567788 4899999999999999999999999999999999989999999999998
Q ss_pred Cc-h---hHHHHHhCCCHHHHHHHHH
Q psy15244 351 VE-H---TLSEEITGIDVVQSQIKIA 372 (1427)
Q Consensus 351 ge-~---~vte~~tGiDLv~~~i~iA 372 (1427)
+. + +.....+|+|+.+..+++.
T Consensus 277 ~~~~s~~p~~~~~~G~~~~~~~~~~~ 302 (306)
T 1iow_A 277 MTSHSLVPMAARQAGMSFSQLVVRIL 302 (306)
T ss_dssp CSTTCHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHcCCCHHHHHHHHH
Confidence 75 2 3445679999999998865
No 59
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=99.97 E-value=6e-30 Score=304.62 Aligned_cols=299 Identities=19% Similarity=0.223 Sum_probs=222.2
Q ss_pred CCEEEEEcCC---------HHHHHHHHHHHHcCCEEEEEecCCCccCcccc----ccc--eEEEcCCCCCcccCCCCHHH
Q psy15244 57 MEKILIANRS---------EVAIRVARACNEMGIKSVGIYSEQDKFSAHRT----KVD--QAFLVGKGMPPVAAYLNIPE 121 (1427)
Q Consensus 57 ~kkVLIagrG---------eia~riiraa~elGi~~vav~s~~d~~s~~~~----~aD--e~~~i~~~~~~~~~yldi~~ 121 (1427)
++||+|+.+| ..|..+++++++.|++++.++.+++....... .++ ..+.++.+ ....+ ..
T Consensus 3 ~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~ 77 (364)
T 2i87_A 3 KENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIKSTDELHLENG--EALEI---SQ 77 (364)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEECTTCCEEEECCCCSCCCSGGGSCGGGS--EEECS---SG
T ss_pred CcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEcCCCCEEeccccccccccchhhccccc--ccccc---cc
Confidence 4578887755 24678999999999999999877653211000 000 00000000 00001 11
Q ss_pred HHHH-HHhcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHH-
Q psy15244 122 IICI-AKNNNVDAIHPGY-GFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVD- 198 (1427)
Q Consensus 122 Ii~i-a~~~~vDaI~pg~-gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~e- 198 (1427)
++.. .+..++|+|+|.. |...|+..++..++..|++++||+++++..+.||..++++++++|||+|++. .+.+.+
T Consensus 78 ~~~~~~~~~~~D~v~~~~~g~~~ed~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~ 155 (364)
T 2i87_A 78 LLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYI--SFLRSEY 155 (364)
T ss_dssp GGGBCTTSSBCSEEEEECCCSSSCTTHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHHTCCCCCEE--EEEHHHH
T ss_pred cccccccccCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCEE--EEechhh
Confidence 2111 1356799999985 7778888889999999999999999999999999999999999999999986 455554
Q ss_pred ------HHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEec
Q psy15244 199 ------KVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGD 272 (1427)
Q Consensus 199 ------ea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~D 272 (1427)
++.++++++|||+||||..|+||+||++|++.+||..+++.+.. .+..++||+||+ |+|++|.++++
T Consensus 156 ~~~~~~~~~~~~~~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~I~-G~E~~v~vl~~ 228 (364)
T 2i87_A 156 EKYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQ------FDRKLVIEQGVN-AREIEVAVLGN 228 (364)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEEESSCSSCTTCEEESSHHHHHHHHHHHHT------TCSEEEEEECCC-CEEEEEEEEES
T ss_pred cccchhHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------cCCeEEEEeCcc-CeEEEEEEEcC
Confidence 46677788999999999999999999999999999999876542 257899999999 79999999998
Q ss_pred ccccEEEeeeecc--ccccccce-----EEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEee
Q psy15244 273 KYGDVVHLYERDC--SMQRRYQK-----VIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEV 345 (1427)
Q Consensus 273 g~G~vv~l~erd~--s~qr~~qk-----~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEI 345 (1427)
+++.++...+..+ ...+...+ .....|+ .++++..+++.+.+.+++++||+.|.+++||+++++|++||+||
T Consensus 229 ~~~~~~~~~e~~~~~~~~~~~~k~~~g~~~~~~pa-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g~~~viEi 307 (364)
T 2i87_A 229 DYPEATWPGEVVKDVAFYDYKSKYKDGKVQLQIPA-DLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINET 307 (364)
T ss_dssp SSCEECCCEEECCSCCC-----------CCEESSC-SSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEE
T ss_pred CCcEEeeeEEEecCCCcCCHHHcccCCCeeEEeCC-CCCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEecCCCEEEEEE
Confidence 7554444444332 11111111 2345788 49999999999999999999999999999999998899999999
Q ss_pred CCCCCCch----hHHHHHhCCCHHHHHHH
Q psy15244 346 NPRLQVEH----TLSEEITGIDVVQSQIK 370 (1427)
Q Consensus 346 NpRl~ge~----~vte~~tGiDLv~~~i~ 370 (1427)
|||+++.. +....++|+|+.+...+
T Consensus 308 N~rpg~t~~s~~p~~~~~~G~~~~~l~~~ 336 (364)
T 2i87_A 308 NAMPGFTAFSMYPKLWENMGLSYPELITK 336 (364)
T ss_dssp ESSCCCSTTSHHHHHHHHTTCCHHHHHHH
T ss_pred eCCCCCCchhHHHHHHHHhCCCHHHHHHH
Confidence 99999752 33445689998665444
No 60
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=99.97 E-value=1.4e-29 Score=301.50 Aligned_cols=234 Identities=22% Similarity=0.276 Sum_probs=197.9
Q ss_pred hcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHH----HHHH
Q psy15244 128 NNNVDAIHPG-YGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVD----KVKE 202 (1427)
Q Consensus 128 ~~~vDaI~pg-~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~e----ea~~ 202 (1427)
..++|+|+|+ +|...|+..++..|+.+|++++|+++.++..+.||..+|++++++|||+|++. .+.+.+ ++.+
T Consensus 96 ~~~~D~vf~~lhG~~gEdg~iq~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~~~ 173 (364)
T 3i12_A 96 LPTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFI--TLTRTNRHAFSFAE 173 (364)
T ss_dssp CCCCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCEE--EEETTTGGGCCHHH
T ss_pred cCCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHHCHHHHHHHHHHCCCCCCCEE--EEEccccchhhHHH
Confidence 3579999999 79999999999999999999999999999999999999999999999999987 556655 7778
Q ss_pred HHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeee
Q psy15244 203 FCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYE 282 (1427)
Q Consensus 203 ~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~e 282 (1427)
+++++|||+||||..|+||+|+++|++.+||.++++.+... +..++||+||+ |+|++|.++.|+.+.+....+
T Consensus 174 ~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~~------~~~vlVEe~I~-G~E~~v~vl~~~~~~~~~~~e 246 (364)
T 3i12_A 174 VESRLGLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEF------DHKVVVEQGIK-GREIECAVLGNDNPQASTCGE 246 (364)
T ss_dssp HHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEEEEESSSCEEEEEEE
T ss_pred HHHhcCCCEEEEECCCCCCcCeEEeCCHHHHHHHHHHHHhc------CCcEEEEcCcC-CeEEEEEEEeCCCceEeeeEE
Confidence 88899999999999999999999999999999999877543 57899999999 699999999987655555444
Q ss_pred e---cc--cccccc---ceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCc--
Q psy15244 283 R---DC--SMQRRY---QKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVE-- 352 (1427)
Q Consensus 283 r---d~--s~qr~~---qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge-- 352 (1427)
. ++ .+...+ .......|+ .++++..+++.+.+.++++++|++|.+++||+++++|++||+|||+|++..
T Consensus 247 i~~~~~~~~~~~ky~~~~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g~~~vlEiN~~Pg~t~~ 325 (364)
T 3i12_A 247 IVLNSEFYAYDTKYIDDNGAQVVVPA-QIPSEVNDKIRAIAIQAYQTLGCAGMARVDVFLTADNEVVINEINTLPGFTNI 325 (364)
T ss_dssp EECCTTCC--TTTTSGGGGCEEESSC-SSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESSCCCSTT
T ss_pred EecCCCccCHHHcccCCCceEEEeCC-CCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEecCCCEEEEEeeCCCCCCCC
Confidence 2 11 111111 125677888 499999999999999999999999999999999988999999999988853
Q ss_pred --hhHHHHHhCCCHHHHHHHH
Q psy15244 353 --HTLSEEITGIDVVQSQIKI 371 (1427)
Q Consensus 353 --~~vte~~tGiDLv~~~i~i 371 (1427)
.+....++|+|+.+...++
T Consensus 326 s~~p~~~~a~G~~~~~l~~~l 346 (364)
T 3i12_A 326 SMYPKLWQASGLGYTDLISRL 346 (364)
T ss_dssp CHHHHHHHTTTCCHHHHHHHH
T ss_pred CHHHHHHHHhCcCHHHHHHHH
Confidence 3444566899988866554
No 61
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=99.97 E-value=2e-29 Score=302.06 Aligned_cols=234 Identities=21% Similarity=0.235 Sum_probs=196.6
Q ss_pred hcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHH----HHHH
Q psy15244 128 NNNVDAIHPG-YGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVD----KVKE 202 (1427)
Q Consensus 128 ~~~vDaI~pg-~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~e----ea~~ 202 (1427)
..++|+|+|+ +|...|+..++..|+..|++++|+++.++..+.||..+|++++++|||+|++. .+.+.+ ++.+
T Consensus 115 ~~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~--~~~~~~~~~~~~~~ 192 (386)
T 3e5n_A 115 LAQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVAPFV--CFDRHTAAHADVDT 192 (386)
T ss_dssp CCCCSEEEEEECSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHBHHHHHHHHHHTTCCBCCEE--EEEHHHHTTCCHHH
T ss_pred cCCCCEEEEcCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCCCCEE--EEeCcccchhhHHH
Confidence 4579999999 89999998999999999999999999999999999999999999999999986 566666 6778
Q ss_pred HHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeee
Q psy15244 203 FCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYE 282 (1427)
Q Consensus 203 ~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~e 282 (1427)
+++.+|||+||||..|+||+|+++|++.+||.++++.+.. .+..++||+||+ |+|++|.+++++...++...+
T Consensus 193 ~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~------~~~~vlVEe~I~-G~E~~v~vl~~~~~~~~~~ge 265 (386)
T 3e5n_A 193 LIAQLGLPLFVKPANQGSSVGVSQVRTADAFAAALALALA------YDHKVLVEAAVA-GREIECAVLGNAVPHASVCGE 265 (386)
T ss_dssp HHHHHCSSEEEEESBSCSSTTCEEECSGGGHHHHHHHHTT------TCSEEEEEECCC-SEEEEEEEECSSSCEEEEEEE
T ss_pred HHHhcCCCEEEEECCCCcCCCEEEECCHHHHHHHHHHHHh------CCCcEEEEcCCC-CeEEEEEEEeCCCceEEEeEE
Confidence 8889999999999999999999999999999999876542 257899999999 799999999987666665555
Q ss_pred ecccc--ccccce------EEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCc--
Q psy15244 283 RDCSM--QRRYQK------VIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVE-- 352 (1427)
Q Consensus 283 rd~s~--qr~~qk------~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge-- 352 (1427)
..+.. .....+ .....|+ .++++..+++.+.+.++++++|++|.+++||+++++|++||+|||||++-.
T Consensus 266 i~~~~~~~d~~~ky~~~~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~dg~~~vlEiN~~PG~t~~ 344 (386)
T 3e5n_A 266 VVVHDAFYSYATKYISEHGAEIVIPA-DIDAQTQQRIQQIAVQAYQALGCAGMARVDVFLCADGRIVINEVNTLPGFTRI 344 (386)
T ss_dssp ECC-----------------CEESSC-SSCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEECTTCCEEEEEEESSCCCSTT
T ss_pred EEeCCcccchhcccCCCCCeEEEECC-CCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEECCCcEEEEEeECCCCCCcc
Confidence 54431 111111 3456688 499999999999999999999999999999999999999999999999843
Q ss_pred --hhHHHHHhCCCHHHHHHHH
Q psy15244 353 --HTLSEEITGIDVVQSQIKI 371 (1427)
Q Consensus 353 --~~vte~~tGiDLv~~~i~i 371 (1427)
.|....++|+|+.+...++
T Consensus 345 S~~p~~~~~~Gi~~~~li~~l 365 (386)
T 3e5n_A 345 SVYPKLWQASGLDYRGLITRL 365 (386)
T ss_dssp CHHHHHHHTTTCCHHHHHHHH
T ss_pred CHHHHHHHHhCCCHHHHHHHH
Confidence 3444556899988766544
No 62
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=99.96 E-value=9e-29 Score=295.76 Aligned_cols=299 Identities=17% Similarity=0.196 Sum_probs=213.9
Q ss_pred CCEEEEEcCCH---------HHHHHHHHHHHcCCEEEEEecCCCccCc-cccccceEE---EcCCCCCcc--cCCCCHHH
Q psy15244 57 MEKILIANRSE---------VAIRVARACNEMGIKSVGIYSEQDKFSA-HRTKVDQAF---LVGKGMPPV--AAYLNIPE 121 (1427)
Q Consensus 57 ~kkVLIagrGe---------ia~riiraa~elGi~~vav~s~~d~~s~-~~~~aDe~~---~i~~~~~~~--~~yldi~~ 121 (1427)
++||+|+-+|. .|..+++++++.|++++.++.+.+..-. .....+... .+. ..... ....+...
T Consensus 37 ~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 115 (383)
T 3k3p_A 37 KETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAGDFIKTQEFDSQPSETDKLM-TNDTIIASQKIKPSD 115 (383)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEEEEESSCCC--CCCC-CTTSCCGGGEECGGG
T ss_pred CCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEecCCCCEEeccccccccccccccc-ccccccccccccccc
Confidence 34777765432 4667899999999999999876542110 000000000 000 00000 00000001
Q ss_pred HHHHHHhcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCC-CCCCCCccccCCCH--
Q psy15244 122 IICIAKNNNVDAIHPG-YGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKAD-VPIIPGTTEPVTDV-- 197 (1427)
Q Consensus 122 Ii~ia~~~~vDaI~pg-~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aG-Vpvp~~~~~~v~s~-- 197 (1427)
++ .++|.|+|. .|...|+..++..++..|++++|+++.++..+.||..+|++++++| ||+|++. .+.+.
T Consensus 116 ~~-----~~~D~vf~~lhG~~GEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~G~Ipvp~~~--~~~~~~~ 188 (383)
T 3k3p_A 116 IY-----EEEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQVAYV--ALIEGEP 188 (383)
T ss_dssp GC-----CTTCEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHHCCCCBCCEE--EEETTSC
T ss_pred cc-----cCCCEEEEcCCCCCcchHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHhCCCcCCCCEE--EEeCccc
Confidence 10 369999997 4666688899999999999999999999999999999999999999 9999986 34443
Q ss_pred --HHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccc
Q psy15244 198 --DKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYG 275 (1427)
Q Consensus 198 --eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G 275 (1427)
+++.++++++|||+||||..|+||+||++|++.+||.++++.+... +..++||+||+ |+|++|.+++|+..
T Consensus 189 ~~~~~~~~~~~lg~PvvVKP~~ggss~GV~~v~~~~el~~al~~a~~~------~~~vlVEe~I~-G~E~~v~vl~d~~~ 261 (383)
T 3k3p_A 189 LESKLAEVEEKLIYPVFVKPANMGSSVGISKAENRTDLKQAIALALKY------DSRVLIEQGVD-AREIEVGILGNTDV 261 (383)
T ss_dssp HHHHHHHHHHHCCSSEEEEECC------CEEESSHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEEEEESSSC
T ss_pred hhHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhC------CCeEEEEcCCC-CeEEEEEEEeCCCe
Confidence 5677788899999999999999999999999999999999877643 57899999999 89999999988654
Q ss_pred cEEEeeeec--ccccccc-----ceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCC
Q psy15244 276 DVVHLYERD--CSMQRRY-----QKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPR 348 (1427)
Q Consensus 276 ~vv~l~erd--~s~qr~~-----qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpR 348 (1427)
.+..+.+.. +.+.... .......|+. ++++..+++.+.+.++++++|++|.+++||+++++|++||+|||||
T Consensus 262 ~~~~~~ei~~~~~~~d~~~ky~~g~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~~g~~~vlEINtr 340 (383)
T 3k3p_A 262 KTTLPGEIVKDVAFYDYEAKYIDNKITMAIPAE-IDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLTEDGKVYLNELNTM 340 (383)
T ss_dssp EECCCEEEC-----------------CEESSCC-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESS
T ss_pred eEEeeEEEecCCCccchhhcccCCCeeEEecCC-CCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEECCCCEEEEEeeCC
Confidence 433333321 1111111 2345677884 9999999999999999999999999999999998899999999999
Q ss_pred CCCc----hhHHHHHhCCCHHHHHHHH
Q psy15244 349 LQVE----HTLSEEITGIDVVQSQIKI 371 (1427)
Q Consensus 349 l~ge----~~vte~~tGiDLv~~~i~i 371 (1427)
++-. .+....++|+|+.+...++
T Consensus 341 PG~t~~S~~p~~~~a~Gi~~~~li~~l 367 (383)
T 3k3p_A 341 PGFTQWSMYPLLWENMGLSYSVLIEEL 367 (383)
T ss_dssp CCCC--CHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCcccHHHHHHHHhCCCHHHHHHHH
Confidence 9833 4555566899987765554
No 63
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=99.96 E-value=1.3e-28 Score=285.62 Aligned_cols=271 Identities=16% Similarity=0.195 Sum_probs=208.2
Q ss_pred CEEEEEcCC---------HHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHh
Q psy15244 58 EKILIANRS---------EVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKN 128 (1427)
Q Consensus 58 kkVLIagrG---------eia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~ 128 (1427)
+||+|+.+| ..+..+++++++.|++++.++.+.... . +.+.
T Consensus 4 m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~---------------------------~---~~~~ 53 (307)
T 3r5x_A 4 MRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMD---------------------------L---IEKA 53 (307)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGG---------------------------H---HHHT
T ss_pred cEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchh---------------------------H---HHhc
Confidence 378887766 346678999999999999887642110 0 1233
Q ss_pred cCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHH-HHHh
Q psy15244 129 NNVDAIHPGY-GFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKE-FCDE 206 (1427)
Q Consensus 129 ~~vDaI~pg~-gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~-~a~~ 206 (1427)
.++|+|+|+. |...|+..++..++..|++++||+++++..+.||..++++++++|||+|++. .+.+.+++.. +++.
T Consensus 54 ~~~D~v~~~~~~~~ge~~~~~~~le~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~--~~~~~~~~~~~~~~~ 131 (307)
T 3r5x_A 54 KDIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWI--ELTKMEDLNFDELDK 131 (307)
T ss_dssp TTCSEEEECCCSHHHHSSHHHHHHHHHTCCBSSSCHHHHHHHHCHHHHHHHHHHTTCCCCCEE--EEESSSCCCHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCEE--EEeChhhhhHHHHHh
Confidence 5799999985 3334677788899999999999999999999999999999999999999986 5556555543 6788
Q ss_pred cCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeeccc
Q psy15244 207 VEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDCS 286 (1427)
Q Consensus 207 iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~s 286 (1427)
++||+||||..|+||+||+++++.+++.++++.+... +..+++|+||+ |+|++|.++.+ +++.+.+..+.
T Consensus 132 ~~~P~vvKP~~~~~s~Gv~~v~~~~el~~~~~~~~~~------~~~~lvee~i~-G~e~~v~v~~g---~~~~~~~~~~~ 201 (307)
T 3r5x_A 132 LGFPLVVKPNSGGSSVGVKIVYDKDELISMLETVFEW------DSEVVIEKYIK-GEEITCSIFDG---KQLPIISIRHA 201 (307)
T ss_dssp HCSSEEEEECC----CCCEEECSHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEEEETT---EECCCEEEEEE
T ss_pred cCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEECCcC-CEEEEEEEECC---EEeeEEEEEcC
Confidence 9999999999999999999999999999999876543 57899999999 79999999643 34333222221
Q ss_pred cc--cccceE----EEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCc----hhHH
Q psy15244 287 MQ--RRYQKV----IQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVE----HTLS 356 (1427)
Q Consensus 287 ~q--r~~qk~----ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge----~~vt 356 (1427)
.+ ....+. ....|+ .++++..+++.+.+.++++++|++|.+++||+++ +|++||||||||++.. .+..
T Consensus 202 ~~~~~~~~~~~~~g~~~~p~-~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~-~g~~~vlEiN~rpg~~~~s~~~~~ 279 (307)
T 3r5x_A 202 AEFFDYNAKYDDASTIEEVI-ELPAELKERVNKASLACYKALKCSVYARVDMMVK-DGIPYVMEVNTLPGMTQASLLPKS 279 (307)
T ss_dssp EEEETTEEEEEEEEEEEEEC-CCCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEE-TTEEEEEEEESSCCCSTTSHHHHH
T ss_pred CcccChhhcCCCCCCeEecC-CCCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEE-CCeEEEEEEcCCCCCCccCHHHHH
Confidence 11 221222 222377 5899999999999999999999999999999999 5889999999999853 3445
Q ss_pred HHHhCCCHHHHHHHHH
Q psy15244 357 EEITGIDVVQSQIKIA 372 (1427)
Q Consensus 357 e~~tGiDLv~~~i~iA 372 (1427)
...+|+|+.+...++.
T Consensus 280 ~~~~G~~~~~li~~ll 295 (307)
T 3r5x_A 280 ADAAGIHYSKLLDMII 295 (307)
T ss_dssp HHHTTCCHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHH
Confidence 6679999988666553
No 64
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=99.96 E-value=1.8e-28 Score=292.09 Aligned_cols=233 Identities=18% Similarity=0.199 Sum_probs=186.9
Q ss_pred cCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHH----HHHH
Q psy15244 129 NNVDAIHPG-YGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDK----VKEF 203 (1427)
Q Consensus 129 ~~vDaI~pg-~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~ee----a~~~ 203 (1427)
.++|+|+|. .|...|+..++..|+..||+++|+++.++..+.||..+|++++++|||+|++. .+.+.++ +.++
T Consensus 97 ~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~--~~~~~~~~~~~~~~~ 174 (372)
T 3tqt_A 97 YSADCVFPMVHGTQGEDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDWH--TLSPRDATEGVYQRL 174 (372)
T ss_dssp ECCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCCBCCCE--EECTTSCCTTHHHHH
T ss_pred cCCCEEEEcCCCCCCcCHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEE--EEechhhhhhHHHHH
Confidence 579999998 57778998999999999999999999999999999999999999999999986 4554442 5567
Q ss_pred HHhcCCc-EEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeee
Q psy15244 204 CDEVEFP-VILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYE 282 (1427)
Q Consensus 204 a~~iGyP-vVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~e 282 (1427)
++++||| +||||+.|+||+||++|++.+||.++++.+.+ .+..++||+||+ |+|++|.+++++...+....+
T Consensus 175 ~~~lg~P~vvVKP~~ggss~Gv~~v~~~~eL~~a~~~a~~------~~~~vlVEe~I~-G~E~~v~vl~~~~~~~~~~~e 247 (372)
T 3tqt_A 175 LDRWGTSELFVKAVSLGSSVATLPVKTETEFTKAVKEVFR------YDDRLMVEPRIR-GREIECAVLGNGAPKASLPGE 247 (372)
T ss_dssp HHHC---CEEEEESSCCSGGGEEEECSHHHHHHHHHHHTT------TCSCEEEEECCC-SEEEEEEEEESSSCEECCCEE
T ss_pred HHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHh------cCCCEEEECCCC-CEEEEEEEEeCCCceEeeeEE
Confidence 7899999 99999999999999999999999999876542 157899999999 899999999986422222222
Q ss_pred ec-----ccccccc--ce-EEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCc--
Q psy15244 283 RD-----CSMQRRY--QK-VIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVE-- 352 (1427)
Q Consensus 283 rd-----~s~qr~~--qk-~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge-- 352 (1427)
.. +.++.++ .. .....|+ .++++..+++.+.|.+++++||++|.+++||+++++|++||+|||||++-.
T Consensus 248 i~~~~~~~d~~~ky~~g~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~rvDf~~~~dg~~~vlEINt~PG~t~~ 326 (372)
T 3tqt_A 248 IIPHHDYYSYDAKYLDPNGATTTTSV-DLSESVTKQIQQIAIDAFKMVHCSGMARVDFFVTPNNKVLVNEINTIPGFTNI 326 (372)
T ss_dssp EECC---------------CEEESCC-CCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESSCCCSTT
T ss_pred EecCCCccchhhcccCCCceEEEeCC-CCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEeCCCcEEEEEEECCCCcCcc
Confidence 11 1222222 22 5567788 499999999999999999999999999999999998999999999999833
Q ss_pred --hhHHHHHhCCCHHHHHHHH
Q psy15244 353 --HTLSEEITGIDVVQSQIKI 371 (1427)
Q Consensus 353 --~~vte~~tGiDLv~~~i~i 371 (1427)
.|....++|+|+.+...++
T Consensus 327 S~~p~~~~~~G~~~~~li~~l 347 (372)
T 3tqt_A 327 SMYPKMWEASGLPCPNLLDQL 347 (372)
T ss_dssp CHHHHHHHHTTCCHHHHHHHH
T ss_pred CHHHHHHHHhCCCHHHHHHHH
Confidence 4445667899987766544
No 65
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=99.96 E-value=5e-29 Score=294.31 Aligned_cols=297 Identities=19% Similarity=0.186 Sum_probs=221.1
Q ss_pred CCEEEEEcCCH---------HHHHHHHHHHHcCCEEEEEecCCCccCccc-----ccc----ceEEEcCCCCCcccCCCC
Q psy15244 57 MEKILIANRSE---------VAIRVARACNEMGIKSVGIYSEQDKFSAHR-----TKV----DQAFLVGKGMPPVAAYLN 118 (1427)
Q Consensus 57 ~kkVLIagrGe---------ia~riiraa~elGi~~vav~s~~d~~s~~~-----~~a----De~~~i~~~~~~~~~yld 118 (1427)
.+||+|+.+|. .|..+++++++.|++++.++.+++...... .+. |..+..+.+ ....
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--- 77 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVWKMCEKPCAEWENENCYSAVLSPDK--KMHG--- 77 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEESCCCTTCCCTTCEEEEECSCT--TTCE---
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEcCCCCEEecccchhhcccccccceeccccc--cccc---
Confidence 45788887653 377899999999999999987665311100 011 222222100 0000
Q ss_pred HHHH-HHH--HHhcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccC
Q psy15244 119 IPEI-ICI--AKNNNVDAIHPG-YGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPV 194 (1427)
Q Consensus 119 i~~I-i~i--a~~~~vDaI~pg-~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v 194 (1427)
.+ +.. .+..++|+|+|. .|...|+..++..++..|++++|++++++..+.||..++++++++|||+|++. .+
T Consensus 78 --~~~~~~~~~~~~~~D~v~~~~~g~~ged~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~--~~ 153 (343)
T 1e4e_A 78 --LLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAFW--VI 153 (343)
T ss_dssp --EEEEETTEEEEEECSEEEECCCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEE--EE
T ss_pred --ceeecccccccccCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCcCCEE--EE
Confidence 01 000 123579999998 45566777889999999999999999999999999999999999999999986 45
Q ss_pred CCHHHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEeccc
Q psy15244 195 TDVDKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKY 274 (1427)
Q Consensus 195 ~s~eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~ 274 (1427)
.+.+++. .+++|||+||||..|+||+||++|++.+||..+++.+.. .+..++||+||+ |+|++|.+++++.
T Consensus 154 ~~~~~~~--~~~~~~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~I~-G~E~~v~vl~~~~ 224 (343)
T 1e4e_A 154 NKDDRPV--AATFTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQ------YDSKILIEQAVS-GCEVGCAVLGNSA 224 (343)
T ss_dssp CTTCCCC--GGGSCSCEEEEESSCCTTTTCEEECSGGGHHHHHHHHTT------TCSSEEEEECCC-SEEEEEEEEEETT
T ss_pred echhhhh--hhccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh------cCCcEEEEeCcC-CeEEEEEEEeCCC
Confidence 5554432 267899999999999999999999999999999876532 257899999999 8999999999865
Q ss_pred ccEE-Eeeeecc-----ccccc------cceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEE
Q psy15244 275 GDVV-HLYERDC-----SMQRR------YQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYF 342 (1427)
Q Consensus 275 G~vv-~l~erd~-----s~qr~------~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yf 342 (1427)
+..+ .+.+..+ .+... ........|+ .++++..+++.+.+.+++++||+.|.+++||+++++|++||
T Consensus 225 ~~~~~~~~ei~~~~~~~~~~~k~~~~~~~g~~~~~~p~-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g~~~v 303 (343)
T 1e4e_A 225 ALVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVPA-DLSAEERGRIQETVKKIYKTLGCRGLARVDMFLQDNGRIVL 303 (343)
T ss_dssp CCEECCCEEEEESSSCCCGGGSSSGGGCCSSEEECSSC-SSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTCCEEE
T ss_pred CeEEeeeEEEeeCCCccCHhhcccccCCCCCeeEEeCC-CCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEeCCCCEEE
Confidence 4211 1223221 11111 1234566788 49999999999999999999999999999999998999999
Q ss_pred EeeCCCCCCc----hhHHHHHhCCCHHHHHHHHH
Q psy15244 343 IEVNPRLQVE----HTLSEEITGIDVVQSQIKIA 372 (1427)
Q Consensus 343 IEINpRl~ge----~~vte~~tGiDLv~~~i~iA 372 (1427)
+|||||++.. .+....++|+|+.+...++.
T Consensus 304 iEiN~rpg~t~~s~~p~~~~~~G~~~~~l~~~li 337 (343)
T 1e4e_A 304 NEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLI 337 (343)
T ss_dssp EEEESSCCCSTTCHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEeeCCCCCCcccHHHHHHHHhCCCHHHHHHHHH
Confidence 9999999975 24445567999988776653
No 66
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=99.96 E-value=4.3e-29 Score=295.27 Aligned_cols=288 Identities=19% Similarity=0.173 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHcCCEEEEEecCCCccCccc-----cccc----eEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEeCC
Q psy15244 68 VAIRVARACNEMGIKSVGIYSEQDKFSAHR-----TKVD----QAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHPGY 138 (1427)
Q Consensus 68 ia~riiraa~elGi~~vav~s~~d~~s~~~-----~~aD----e~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~pg~ 138 (1427)
.|..+++++++.|++++.++.+.+..-... .... .....+ . ........... ...++.++|.|+|..
T Consensus 23 sa~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~--~~~~~~~~D~v~~~l 98 (346)
T 3se7_A 23 SAREVATHLGTGVFEPFYLGITKSGAWQLCDGPGENWEDGNCRPAVLSP-D-RSVHGLLVLEQ--GKYETIRLDLVLPVL 98 (346)
T ss_dssp HHHHHHHHSCTTTEEEEEEEECTTSCEEEESCSSSSSSSSCCEEEEECC-C-TTTCEEEEEET--TEEEEEECSEEEECC
T ss_pred HHHHHHHHhcccCCEEEEEEECCCCCEEeccchhhhhcccccccceecc-C-ccCccceeccc--ccccccCCCEEEEcc
Confidence 466789999999999999987655211000 0000 000000 0 00000000000 002245799999994
Q ss_pred -CcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeecC
Q psy15244 139 -GFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAAF 217 (1427)
Q Consensus 139 -gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~~ 217 (1427)
|...|+..++..++..|++++|+++.++..+.||..++++++++|||+|++. .+.+.+ ..+++.+|||+||||..
T Consensus 99 hG~~gedg~iq~~le~~gip~~g~~~~a~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~--~~~~~~lg~PvvvKP~~ 174 (346)
T 3se7_A 99 HGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNFW--TVTADE--KIPTDQLTYPVFVKPAR 174 (346)
T ss_dssp CSTTTTSSHHHHHHHHHCCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEE--EEETTS--CCCTTTCCSSEEEEESS
T ss_pred CCCCCCChHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHcCcCcCCEE--EEcCcH--HHHHHhcCCCEEEEeCC
Confidence 8888998999999999999999999999999999999999999999999986 444443 33466889999999999
Q ss_pred CCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEeccccc-EEEeeeeccc------cccc
Q psy15244 218 GGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGD-VVHLYERDCS------MQRR 290 (1427)
Q Consensus 218 GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~-vv~l~erd~s------~qr~ 290 (1427)
|+||+|+++|++.+||.++++.+.. .+..++||+||+ |+|++|.++.++.+. +..+.+..+. .|++
T Consensus 175 ~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~vlvEe~I~-G~E~~v~vl~~~~~~~~~~~~e~~~~~~~~d~~q~~ 247 (346)
T 3se7_A 175 SGSSFGVSKVAREEDLQGAVEAARE------YDSKVLIEEAVI-GTEIGCAVMGNGPELITGEVDQITLSHGFFKIHQES 247 (346)
T ss_dssp CCTTTTCEEECSHHHHHHHHHHHTT------TCSEEEEEECCC-SEEEEEEEEEETTEEEECCCEEECCC----------
T ss_pred CCCCcCEEEECCHHHHHHHHHHHHh------CCCcEEEEeCcC-CEEEEEEEEecCCCeEEEeeEEEecCCCCcCcccch
Confidence 9999999999999999999887543 257899999999 899999999986542 2223333221 1111
Q ss_pred cc-----eEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCc----hhHHHHHhC
Q psy15244 291 YQ-----KVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVE----HTLSEEITG 361 (1427)
Q Consensus 291 ~q-----k~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge----~~vte~~tG 361 (1427)
.. ......|+ .++++..+++.+.+.++++++|++|.+++||+++++|++||+|||||++.. .+....++|
T Consensus 248 ~~ky~~~~~~~~~pa-~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~vlEiN~rPG~t~~s~~p~~~~~~G 326 (346)
T 3se7_A 248 TPESGSDNSAVTVPA-DISTTSRSLVQDTAKAVYRALGCRGLSRVDLFLTEDGKVVLNEVNTFPGMTSYSRYPRMMTAAG 326 (346)
T ss_dssp ----CGGGSCEESSC-CCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEECTTSCEEEEEEESSCCCSTTCHHHHHHHHTT
T ss_pred hccccCCCeeEEeCC-CCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEeCCCCEEEEEEeCCCCCCcccHHHHHHHHhC
Confidence 11 23356788 599999999999999999999999999999999999999999999998853 344456799
Q ss_pred CCHHHHHHHH
Q psy15244 362 IDVVQSQIKI 371 (1427)
Q Consensus 362 iDLv~~~i~i 371 (1427)
+|+.+...++
T Consensus 327 ~~~~~l~~~l 336 (346)
T 3se7_A 327 LSRADVIDRL 336 (346)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 9998866554
No 67
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=99.96 E-value=3.1e-28 Score=290.53 Aligned_cols=230 Identities=20% Similarity=0.257 Sum_probs=190.4
Q ss_pred CCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHH--HHHHHHh
Q psy15244 130 NVDAIHPGY-GFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDK--VKEFCDE 206 (1427)
Q Consensus 130 ~vDaI~pg~-gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~ee--a~~~a~~ 206 (1427)
++|+|+|.. |...|+..++..++.+|++++|+++.++..+.||..+|++++++|||+|++. .+.+.++ ....+++
T Consensus 109 ~~D~vfp~lhG~~gEdg~iq~lle~~gip~vG~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~--~~~~~~~~~~~~~~~~ 186 (373)
T 3lwb_A 109 SVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYA--VLRPPRSTLHRQECER 186 (373)
T ss_dssp TCSEEEECCEETTEECCHHHHHHHHHTCCBSSSCHHHHHHHHBHHHHHHHHHHTTCCBCCEE--EECTTCCCCCHHHHHH
T ss_pred CccEEEECCCCCCCccHHHHHHHHHcCCCccCCcHHHHHHHcCHHHHHHHHHHcCcCCCCEE--EEECcccchhHHHHHh
Confidence 699999995 8888999999999999999999999999999999999999999999999986 4554443 1334678
Q ss_pred cCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccc--cEEEeeeec
Q psy15244 207 VEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYG--DVVHLYERD 284 (1427)
Q Consensus 207 iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G--~vv~l~erd 284 (1427)
+|||+||||+.|+||+||++|++.+||.++++.+.+. +..++||+||+ |+|++|.+++++.+ .+..+.+..
T Consensus 187 lg~PvvVKP~~ggss~GV~~v~~~~eL~~a~~~a~~~------~~~vlVEe~I~-G~E~~v~vl~~~~~~~~~~~~~ei~ 259 (373)
T 3lwb_A 187 LGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRH------DPKVIVEAAIS-GRELECGVLEMPDGTLEASTLGEIR 259 (373)
T ss_dssp HCSCEEEEESBCSTTTTCEEECSGGGHHHHHHHHHTT------CSSEEEEECCE-EEEEEEEEEECTTSCEEECCCEEEE
T ss_pred cCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEeCCCC-CeEEEEEEEECCCCceEEeeeeEEE
Confidence 9999999999999999999999999999999876532 57899999999 89999999998766 333344443
Q ss_pred cc--------ccccc-----ceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCC
Q psy15244 285 CS--------MQRRY-----QKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQV 351 (1427)
Q Consensus 285 ~s--------~qr~~-----qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~g 351 (1427)
++ +.+.. .......|+ .++++..+++.+.+.+++++||++|.+++||+++++|+ ||+|||||++.
T Consensus 260 ~~~~~~~~~~~~d~~~ky~~~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~dg~-~vlEIN~~PG~ 337 (373)
T 3lwb_A 260 VAGVRGREDSFYDFATKYLDDAAELDVPA-KVDDQVAEAIRQLAIRAFAAIDCRGLARVDFFLTDDGP-VINEINTMPGF 337 (373)
T ss_dssp CCSTTCSEESSSCHHHHHTCTTCEEESSC-CCCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEETTEE-EEEEEESSCCC
T ss_pred ccCCCCccccccchhhcccCCCceEEeCC-CCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEECCCC-EEEEecCCCCC
Confidence 33 22211 123556788 49999999999999999999999999999999999998 99999999984
Q ss_pred c----hhHHHHHhCCCHHHHHHH
Q psy15244 352 E----HTLSEEITGIDVVQSQIK 370 (1427)
Q Consensus 352 e----~~vte~~tGiDLv~~~i~ 370 (1427)
. .+....++|+|+.+...+
T Consensus 338 t~~S~~p~~~~a~Gi~~~~li~~ 360 (373)
T 3lwb_A 338 TTISMYPRMWAASGVDYPTLLAT 360 (373)
T ss_dssp STTSHHHHHHHHTTCCHHHHHHH
T ss_pred CcccHHHHHHHHhCCCHHHHHHH
Confidence 3 233456799997665433
No 68
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=99.95 E-value=1.4e-27 Score=279.66 Aligned_cols=231 Identities=20% Similarity=0.284 Sum_probs=189.8
Q ss_pred hcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHh
Q psy15244 128 NNNVDAIHPGY-GFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDE 206 (1427)
Q Consensus 128 ~~~vDaI~pg~-gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~ 206 (1427)
..++|+|+|+. |...|+..++..++..|++++||+++++..+.||..++++++++|||+|++. .+.+.++. .. +
T Consensus 74 ~~~~D~v~~~~hg~~gedg~i~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~--~~-~ 148 (322)
T 2fb9_A 74 WERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWV--AVRKGEPP--VV-P 148 (322)
T ss_dssp CTTCSEEEEECCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEE--EEETTSCC--CC-C
T ss_pred ccCCCEEEEeCCCCCCccHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCEE--EEECchhh--hh-c
Confidence 56799999996 8888988899999999999999999999999999999999999999999986 44444331 22 7
Q ss_pred cCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccEEEeeeecc-
Q psy15244 207 VEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDVVHLYERDC- 285 (1427)
Q Consensus 207 iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~vv~l~erd~- 285 (1427)
+|||+||||..|+||+|+++|++.+||.++++.+.+ .+..++||+||+|.+|+++.++++++++++...+..+
T Consensus 149 ~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~------~~~~vlvEe~I~G~~E~~v~vl~~~~~~~~~~~ei~~~ 222 (322)
T 2fb9_A 149 FDPPFFVKPANTGSSVGISRVERFQDLEAALALAFR------YDEKAVVEKALSPVRELEVGVLGNVFGEASPVGEVRYE 222 (322)
T ss_dssp SCSCEEEEETTCCTTTTCEEESSHHHHHHHHHHHTT------TCSEEEEEECCSSCEEEEEEEESSSSCEEEEEEEEEEE
T ss_pred cCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------cCCeEEEEeCCCCCeeEEEEEEeCCCceEeeeEEEeeC
Confidence 899999999999999999999999999999876532 2578999999994399999999987655655544431
Q ss_pred -ccccccc-----eEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCc-h---hH
Q psy15244 286 -SMQRRYQ-----KVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVE-H---TL 355 (1427)
Q Consensus 286 -s~qr~~q-----k~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge-~---~v 355 (1427)
...+... ......|+ .++++..+++.+.+.++++++|+.|.+++||+++ +|++||+|||||++.. + +.
T Consensus 223 ~~~~~~~~k~~~g~~~~~~Pa-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~-~g~~~vlEiN~rpg~t~~s~~p~ 300 (322)
T 2fb9_A 223 APFYDYETKYTPGRAELLIPA-PLDPGTQETVQELALKAYKVLGVRGMARVDFFLA-EGELYLNELNTIPGFTPTSMYPR 300 (322)
T ss_dssp CCEEETTTEEECCEEEEESSC-CCCTTHHHHHHHHHHHHHHHHTCCSEEEEEEEEE-TTEEEEEEEESSCCCSSSCHHHH
T ss_pred CCccCHHHcccCCCeEEEeCC-CCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEE-CCcEEEEEEECCCCCCcccHHHH
Confidence 2222222 23456788 4899999999999999999999999999999999 8999999999999975 2 33
Q ss_pred HHHHhCCCHHHHHHHH
Q psy15244 356 SEEITGIDVVQSQIKI 371 (1427)
Q Consensus 356 te~~tGiDLv~~~i~i 371 (1427)
...++|+|+.+...++
T Consensus 301 ~~~~~G~~~~~l~~~l 316 (322)
T 2fb9_A 301 LFEAGGVAYPELLRRL 316 (322)
T ss_dssp HHHHTTCCHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHH
Confidence 3456899988876654
No 69
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=99.95 E-value=5.6e-27 Score=267.23 Aligned_cols=272 Identities=18% Similarity=0.243 Sum_probs=202.3
Q ss_pred EEEEc--CCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCC-EEEe
Q psy15244 60 ILIAN--RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVD-AIHP 136 (1427)
Q Consensus 60 VLIag--rGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vD-aI~p 136 (1427)
|+|++ .+..+..++++|+++|+++++++..++.. .++|. + ....++| ++++
T Consensus 2 I~il~~~~~~~~~~~~~a~~~~G~~v~~~~~~~~~~----~~~~~-------------~---------~~~~~~d~~~~~ 55 (280)
T 1uc8_A 2 LAILYDRIRPDERMLFERAEALGLPYKKVYVPALPM----VLGER-------------P---------KELEGVTVALER 55 (280)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCEEEEEGGGCCE----ETTBC-------------C---------GGGTTCCEEEEC
T ss_pred EEEEecCCCHHHHHHHHHHHHcCCcEEEEehhhcee----eccCC-------------C---------cccCCCCEEEEC
Confidence 77777 46778899999999999999998765531 11111 1 1224689 8888
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeec
Q psy15244 137 GYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAA 216 (1427)
Q Consensus 137 g~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~ 216 (1427)
.++.. ++..+++.++..|+++++ +++++..+.||..++++++++|||+|++. .+.+.+++.++++++|||+|+||.
T Consensus 56 ~~~~~-~~~~~~~~l~~~g~~~~~-~~~~~~~~~dK~~~~~~l~~~gi~~p~~~--~~~~~~~~~~~~~~~~~p~vvKp~ 131 (280)
T 1uc8_A 56 CVSQS-RGLAAARYLTALGIPVVN-RPEVIEACGDKWATSVALAKAGLPQPKTA--LATDREEALRLMEAFGYPVVLKPV 131 (280)
T ss_dssp CSSHH-HHHHHHHHHHHTTCCEES-CHHHHHHHHBHHHHHHHHHHTTCCCCCEE--EESSHHHHHHHHHHHCSSEEEECS
T ss_pred Cccch-hhHHHHHHHHHCCCceeC-CHHHHHHhCCHHHHHHHHHHcCcCCCCeE--eeCCHHHHHHHHHHhCCCEEEEEC
Confidence 87632 666788999999999885 59999999999999999999999999986 678999999999999999999999
Q ss_pred CCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccC-CceEEEEEEecccccEEEeeeeccc-cccccceE
Q psy15244 217 FGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDR-PRHIEVQILGDKYGDVVHLYERDCS-MQRRYQKV 294 (1427)
Q Consensus 217 ~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeg-greieVqvl~Dg~G~vv~l~erd~s-~qr~~qk~ 294 (1427)
.|+||+|++++++.+|+.++++.+. ....+.+..+++|+||++ +.++++.++. |+++....+... ...+....
T Consensus 132 ~g~~~~gv~~v~~~~el~~~~~~~~--~~~~~~~~~~lvqe~i~~~~~e~~v~v~~---~~~~~~~~~~~~~~~~~~~~g 206 (280)
T 1uc8_A 132 IGSWGRLLAXXXXXXXXXXXXXXKE--VLGGFQHQLFYIQEYVEKPGRDIRVFVVG---ERAIAAIYRRSAHWITNTARG 206 (280)
T ss_dssp BCCBCSHHHHHHHHHC--------------CTTTTCEEEEECCCCSSCCEEEEEET---TEEEEEEEC------------
T ss_pred CCCCcccceecccccccchhhhhHh--hhcccCCCcEEEEeccCCCCceEEEEEEC---CEEEEEEEEecCCccccccCC
Confidence 9999999999999999998887641 111223578999999997 6888888763 344443333210 00000111
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcC
Q psy15244 295 IQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQG 374 (1427)
Q Consensus 295 ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G 374 (1427)
....|. .+++ ++.+.+.++++++|+ |.+++||+++++| +||||+|||++..+ ++.++|+|+.+++++.++|
T Consensus 207 ~~~~p~-~l~~----~~~~~~~~~~~~lg~-g~~~vD~~~~~~g-~~~iEiN~r~g~~~--~~~~~G~~~~~~~~~~~~~ 277 (280)
T 1uc8_A 207 GQAENC-PLTE----EVARLSVKAAEAVGG-GVVAVDLFESERG-LLVNEVNHTMEFKN--SVHTTGVDIPGEILKYAWS 277 (280)
T ss_dssp --CEEC-CCCH----HHHHHHHHHHHHTTC-SEEEEEEEEETTE-EEEEEEETTCCCTT--HHHHHCCCHHHHHHHHHHH
T ss_pred ccccCC-CCCH----HHHHHHHHHHHHhCC-CeEEEEEEEeCCC-eEEEEEeCCCCccc--hheeeccCHHHHHHHHHHh
Confidence 122355 3553 788999999999999 9999999999887 99999999998654 5778999999999999887
Q ss_pred C
Q psy15244 375 K 375 (1427)
Q Consensus 375 ~ 375 (1427)
+
T Consensus 278 ~ 278 (280)
T 1uc8_A 278 L 278 (280)
T ss_dssp T
T ss_pred h
Confidence 5
No 70
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=99.94 E-value=1.1e-26 Score=276.44 Aligned_cols=231 Identities=16% Similarity=0.152 Sum_probs=182.3
Q ss_pred CCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHH--HHHHHHHh
Q psy15244 130 NVDAIHPG-YGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVD--KVKEFCDE 206 (1427)
Q Consensus 130 ~vDaI~pg-~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~e--ea~~~a~~ 206 (1427)
++|+|+|. .|...|+..++..++..|++++|++++++..+.||..+|++++++|||+|++. .+.+.+ ++.+ ++.
T Consensus 107 ~~D~v~~~lhg~~gedg~i~~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~-~~~ 183 (367)
T 2pvp_A 107 ELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRIEASVLSYNKYLTKLYAKDLGIKTLDYV--LLNEKNRANALD-LMN 183 (367)
T ss_dssp ECCSEEECCCSTTTTSSHHHHHHHHTTCCEESCCHHHHHHHHSHHHHHHHHHHHTCBCCCCE--EECTTTGGGHHH-HCC
T ss_pred CCCEEEEcCCCCCccHHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCcCCCCEE--EEeCCchHHHHH-Hhc
Confidence 68999998 56777888889999999999999999999999999999999999999999986 455555 6666 778
Q ss_pred cCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEE-EEEEecccccEEEe-eeec
Q psy15244 207 VEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIE-VQILGDKYGDVVHL-YERD 284 (1427)
Q Consensus 207 iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreie-Vqvl~Dg~G~vv~l-~erd 284 (1427)
+|||+||||+.|+||+|+++|++.+||.++++.+.+ .+..++||+||+|.+|++ +.+..+ |+++.. .+..
T Consensus 184 lg~PvvVKP~~g~ss~Gv~~v~~~~el~~a~~~~~~------~~~~vlVEe~I~G~~E~svi~v~v~--g~~~~~~~ei~ 255 (367)
T 2pvp_A 184 FNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFE------YSKEVLIEPFIQGVKEYNLAGCKIK--KDFCFSYIEEP 255 (367)
T ss_dssp SCSCEEEEESSCCTTTTCEEESSTTSHHHHHHHHTT------TCSCEEEEECCTTCEEEEEEEEEET--TEEEEEEEEET
T ss_pred cCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHh------cCCcEEEEeCCCCCceeeEEEEEEC--CEEEEEEEEEe
Confidence 999999999999999999999999999999876542 157899999999439955 333333 443332 2221
Q ss_pred cc--cccccc-----eEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHHH
Q psy15244 285 CS--MQRRYQ-----KVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSE 357 (1427)
Q Consensus 285 ~s--~qr~~q-----k~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vte 357 (1427)
.. +..... ......|+ .++++..+++.+.+.+++++||+.|.+++||+++ +|++||+|||||++.+.. .
T Consensus 256 ~~~~~~d~~~ky~~g~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~-~g~~~vlEiN~rpg~t~~--s 331 (367)
T 2pvp_A 256 NKQEFLDFKQKYLDFSRNKAPKA-SLSNALEEQLKENFKKLYSDLFDGAIIRCDFFVI-ENEVYLNEINPIPGSLAN--Y 331 (367)
T ss_dssp TTTEEECCCCSSCCSCCCSCCCC-CCCHHHHHHHHHHHHHHHTTTSTTCCEEEEEEEE-TTEEEEEEEESSCGGGGG--G
T ss_pred cCCceEcccccccCCCeeEEecC-CCCHHHHHHHHHHHHHHHHHcCCCCEEEEEEEEE-CCeEEEEEEeCCCCCCcc--c
Confidence 00 111111 12245687 5899999999999999999999999999999999 888999999999986421 1
Q ss_pred HHhCCCHHHHHHHHHcCCCC
Q psy15244 358 EITGIDVVQSQIKIAQGKSL 377 (1427)
Q Consensus 358 ~~tGiDLv~~~i~iA~G~~l 377 (1427)
+.. |+.+...++..+.++
T Consensus 332 ~~p--~~~~l~~~li~~~~~ 349 (367)
T 2pvp_A 332 LFD--DFKTTLENLAQSLPK 349 (367)
T ss_dssp GSS--SHHHHHHHHHHHCC-
T ss_pred ccC--CHHHHHHHHHhCccc
Confidence 111 888888888877654
No 71
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=99.94 E-value=9.9e-26 Score=263.96 Aligned_cols=263 Identities=17% Similarity=0.209 Sum_probs=187.9
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCcc-CccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKF-SAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~-s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
..||||+|+| .+..++++++++|+++++++...+.. ......+|+.+.++ .|.+ +. +++ .+|+|+
T Consensus 2 ~m~Ililg~g-~~~~l~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~d-~~---l~~--~~d~i~ 67 (334)
T 2r85_A 2 KVRIATYASH-SALQILKGAKDEGFETIAFGSSKVKPLYTKYFPVADYFIEE-------KYPE-EE---LLN--LNAVVV 67 (334)
T ss_dssp CSEEEEESST-THHHHHHHHHHTTCCEEEESCGGGHHHHHTTSCCCSEEECS-------SCCH-HH---HHH--TTEEEC
T ss_pred ceEEEEECCh-hHHHHHHHHHhCCCEEEEEECCCCCcccccccccCceEecC-------CcCh-HH---hcc--cCCEEE
Confidence 3489999999 89999999999999999997765421 11345677776643 1322 22 333 358888
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEee
Q psy15244 136 PGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKA 215 (1427)
Q Consensus 136 pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP 215 (1427)
|..++.. ....+.++..|++++ |+++++..+.||..++++++++|||+|++ +.+.+ +++||+||||
T Consensus 68 ~~~e~~~--~~~~~~le~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gip~p~~----~~~~~-------~l~~P~vvKP 133 (334)
T 2r85_A 68 PTGSFVA--HLGIELVENMKVPYF-GNKRVLRWESDRNLERKWLKKAGIRVPEV----YEDPD-------DIEKPVIVKP 133 (334)
T ss_dssp CCTTHHH--HHCHHHHHTCCSCBB-SCTTHHHHHHSHHHHHHHHHHTTCCCCCB----CSCGG-------GCCSCEEEEE
T ss_pred ECcchhh--hhHHHHHHHcCCCcc-CCHHHHHHHHhHHHHHHHHHHcCCCCCCc----cCChH-------HcCCCEEEEe
Confidence 7754321 122445688999976 56799999999999999999999999996 34544 3579999999
Q ss_pred cCCCCCcCeEEecCHHHHHHHHHHHHHHHHHcc-CCCcEEEEeeccCCceEEEEEEeccccc-EEEee-eeccccc----
Q psy15244 216 AFGGGGRGMRMVANKDAIEENFKRAQSEALASF-GKDDMLVEKYIDRPRHIEVQILGDKYGD-VVHLY-ERDCSMQ---- 288 (1427)
Q Consensus 216 ~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~f-g~~~vlVEeyIeggreieVqvl~Dg~G~-vv~l~-erd~s~q---- 288 (1427)
..|+||+||++|++.+|+..+++.+.... .| ....+++|+||+ |.++++.++.+..++ +-.+. ...+..+
T Consensus 134 ~~g~~s~Gv~~v~~~~el~~~~~~~~~~~--~~~~~~~~lvee~i~-G~e~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~ 210 (334)
T 2r85_A 134 HGAKGGKGYFLAKDPEDFWRKAEKFLGIK--RKEDLKNIQIQEYVL-GVPVYPHYFYSKVREELELMSIDRRYESNVDAI 210 (334)
T ss_dssp CC----TTCEEESSHHHHHHHHHHHHCCC--SGGGCCSEEEEECCC-CEEEEEEEEEETTTTEEEEEEEEEEEEEEGGGG
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHhhc--ccCCCCcEEEEeccC-CceeEEEEeecCcCceeeeeeeccEEEeccCcc
Confidence 99999999999999999999887654210 11 137899999999 778887766652222 11110 1001000
Q ss_pred --------------cccceEEEEccCCCCCHHHHHHHHHHHHHHHHHc-----CCCCeEEEEEEEcCCCcEEEEeeCCCC
Q psy15244 289 --------------RRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSL-----GYSNAGTVEFLLDKDDNFYFIEVNPRL 349 (1427)
Q Consensus 289 --------------r~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~al-----g~~G~~~VEflvd~dG~~yfIEINpRl 349 (1427)
.......+. |+ .++++..+++.+.+.+++++| ++.|.+++||+++++|++||||||||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~~-p~-~l~~~~~~~i~~~a~~~~~~l~~~~~~~~G~~~vd~~~~~~g~~~viEiN~R~ 288 (334)
T 2r85_A 211 GRIPAKDQLEFDMDITYTVIGNI-PI-VLRESLLMDVIEAGERVVKAAEELMGGLWGPFCLEGVFTPDLEFVVFEISARI 288 (334)
T ss_dssp GGSCHHHHTTSCCCCCEEEEEEE-EC-CCCGGGHHHHHHHHHHHHHHHHHHSSCCCEEEEEEEEECTTSCEEEEEEECSC
T ss_pred cccccccccccccCCceeeeCCC-Cc-ccCHHHHHHHHHHHHHHHHHHHhhcccccccEEEEEEECCCCCEEEEEEeCCc
Confidence 001122222 77 488888999999999999999 899999999999988899999999999
Q ss_pred CCc
Q psy15244 350 QVE 352 (1427)
Q Consensus 350 ~ge 352 (1427)
+++
T Consensus 289 g~~ 291 (334)
T 2r85_A 289 VAG 291 (334)
T ss_dssp CGG
T ss_pred CCC
Confidence 985
No 72
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=99.93 E-value=5.3e-25 Score=260.38 Aligned_cols=267 Identities=13% Similarity=0.156 Sum_probs=192.4
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCcc-CccccccceEEEcCCCCCcccCCCCH--HHHHHHHHhcCCCEE
Q psy15244 58 EKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKF-SAHRTKVDQAFLVGKGMPPVAAYLNI--PEIICIAKNNNVDAI 134 (1427)
Q Consensus 58 kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~-s~~~~~aDe~~~i~~~~~~~~~yldi--~~Ii~ia~~~~vDaI 134 (1427)
.+|+|+|+| .++.++++|+++|+++++++..++.. ......||+.+.++ .|.|+ +++++.+++.. +.|
T Consensus 19 ~~I~ilGs~-l~~~l~~aAk~lG~~vi~vd~~~~~p~~~~~~~ad~~~~~d-------~~~d~~~~~~l~~l~~~~-~vV 89 (361)
T 2r7k_A 19 ITIATLGSH-TSLHILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVD-------NFSDIKNEEIQEKLRELN-SIV 89 (361)
T ss_dssp CEEEEESST-THHHHHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECS-------SGGGGGSHHHHHHHHHTT-EEE
T ss_pred CEEEEECcH-HHHHHHHHHHHCCCEEEEEECCCCCCcccccccCceEEECC-------CcccccHHHHHHHHHHcC-CEE
Confidence 469999999 89999999999999999998776521 11556789988754 24442 55666666554 555
Q ss_pred EeCCCcccccHH---HHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcE
Q psy15244 135 HPGYGFLSERED---FAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPV 211 (1427)
Q Consensus 135 ~pg~gflsE~~~---~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPv 211 (1427)
.| ++ ++.. +..+.++.|++++| +..+++...||..+|++|+++|||+|++ +.+.+++ +||+
T Consensus 90 ~p--e~--~~v~~~gl~~l~~~~g~~v~g-~~~a~~~e~~k~~~k~~l~~~GIptp~~----~~~~~e~-------~~Pv 153 (361)
T 2r7k_A 90 VP--HG--SFIAYCGLDNVENSFLVPMFG-NRRILRWESERSLEGKLLREAGLRVPKK----YESPEDI-------DGTV 153 (361)
T ss_dssp CC--BH--HHHHHHCHHHHHHTCCSCBBS-CGGGGGTTTCHHHHHHHHHHTTCCCCCE----ESSGGGC-------CSCE
T ss_pred Ee--Cc--hhhhHHHHHHHHHHcCCCcCC-CHHHHHHhhhHHHHHHHHHHcCcCCCCE----eCCHHHc-------CCCE
Confidence 32 21 2222 22333489999887 8899999999999999999999999975 3555543 6999
Q ss_pred EEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccC---CCcEEEEeeccCCceEEEEEEeccc-c--cEEEeeeec-
Q psy15244 212 ILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFG---KDDMLVEKYIDRPRHIEVQILGDKY-G--DVVHLYERD- 284 (1427)
Q Consensus 212 VVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg---~~~vlVEeyIeggreieVqvl~Dg~-G--~vv~l~erd- 284 (1427)
||||..++||+|+++++|.+|+.++++.+... ..|+ +.+++|||||+ |.++++..+..-- + .++.+..|-
T Consensus 154 VVK~~~~a~GkGv~v~~s~ee~~~a~~~~~~~--~~~~~~~~~~viIEEfl~-G~e~s~~~f~~~~~~~~e~~~id~r~~ 230 (361)
T 2r7k_A 154 IVKFPGARGGRGYFIASSTEEFYKKAEDLKKR--GILTDEDIANAHIEEYVV-GTNFCIHYFYSPLKDEVELLGMDKRYE 230 (361)
T ss_dssp EEECSCCCC---EEEESSHHHHHHHHHHHHHT--TSCCHHHHHHCEEEECCC-SEEEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred EEeeCCCCCCCCEEEECCHHHHHHHHHHHHhc--cccccCCCCeEEEEeccc-eEEeeEEEEecccCCeeEEEEecceEE
Confidence 99999999999999999999999999876532 1122 14799999999 6666765554321 2 222222221
Q ss_pred ------ccc----------ccccceEEEEccCCCCCHHHHHHHHHHHHHHHHHc------CCCCeEEEEEEEcCCCcEEE
Q psy15244 285 ------CSM----------QRRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSL------GYSNAGTVEFLLDKDDNFYF 342 (1427)
Q Consensus 285 ------~s~----------qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~al------g~~G~~~VEflvd~dG~~yf 342 (1427)
|.+ ...+....+ .|+ .++++..+++.+.+.++++++ ++.|++++||+++++|++|+
T Consensus 231 ~~~dgi~~~~~~~~~~~~~~p~~v~~G~-~Pa-~l~~~~~~~a~~~a~~v~~al~~~~~~~~~G~~~vE~fvt~dg~i~V 308 (361)
T 2r7k_A 231 SNIDGLVRIPAKDQLEMNINPSYVITGN-IPV-VIRESLLPQVFEMGDKLVAKAKELVPPGMIGPFCLQSLCNENLELVV 308 (361)
T ss_dssp EEHHHHTTSCHHHHHTCCCCCCEEEEEE-EEC-CCCGGGHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEEEECTTSCEEE
T ss_pred eecccceecchhhhhcccCCCceEEecC-cCC-cCCHHHHHHHHHHHHHHHHHHHhhccCCccceEEEEEEEcCCCCEEE
Confidence 111 011222333 288 488899999999999999999 89999999999998889999
Q ss_pred EeeCCCCCCchh
Q psy15244 343 IEVNPRLQVEHT 354 (1427)
Q Consensus 343 IEINpRl~ge~~ 354 (1427)
+|||||++|+..
T Consensus 309 ~EIapR~gGg~~ 320 (361)
T 2r7k_A 309 FEMSARVDGGTN 320 (361)
T ss_dssp EEEESSBCGGGG
T ss_pred EEEcCCCCCCcc
Confidence 999999999733
No 73
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}
Probab=99.90 E-value=1.1e-22 Score=236.27 Aligned_cols=210 Identities=17% Similarity=0.198 Sum_probs=164.9
Q ss_pred HHHHHHHHHhcCCCEEEe-CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCH
Q psy15244 119 IPEIICIAKNNNVDAIHP-GYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDV 197 (1427)
Q Consensus 119 i~~Ii~ia~~~~vDaI~p-g~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~ 197 (1427)
.+.+.+++++ +|.+++ .+|.......+.+.++..| +++|+++++++.+.||..+++++++ |||+|++. +
T Consensus 60 ~~~l~~~~~~--~D~~~~i~~~ed~~l~~~~~~l~~~g-~~~g~~~~~~~~~~dK~~~~~~l~~-Gip~p~~~---~--- 129 (305)
T 3df7_A 60 MDSMEKYLEK--SDAFLIIAPEDDFLLYTLTKKAEKYC-ENLGSSSRAIAVTSDKWELYKKLRG-EVQVPQTS---L--- 129 (305)
T ss_dssp GGGHHHHHTT--CSEEEEECCCGGGHHHHHHHHHHTTS-EESSCCHHHHHHHTSHHHHHHHHTT-TSCCCCEE---S---
T ss_pred HHHHHHHHHh--cCEEEEEccCCcHHHHHHHHHHHhcC-CccCCCHHHHHHhcCHHHHHHHHHh-CCCCCCEe---c---
Confidence 4577777766 555554 3443333345667777777 7899999999999999999999999 99999985 2
Q ss_pred HHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccE
Q psy15244 198 DKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDV 277 (1427)
Q Consensus 198 eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~v 277 (1427)
.+++||+||||..|+||+|++++++ .+..+++|+||+ |+|++|.++.++ .+
T Consensus 130 -------~~~~~P~vvKP~~g~gs~Gv~~v~~-------------------~~~~~lvEe~I~-G~e~sv~v~~g~--~~ 180 (305)
T 3df7_A 130 -------RPLDCKFIIKPRTACAGEGIGFSDE-------------------VPDGHIAQEFIE-GINLSVSLAVGE--DV 180 (305)
T ss_dssp -------SCCSSSEEEEESSCC----CBCCSS-------------------CCTTEEEEECCC-SEEEEEEEEESS--SE
T ss_pred -------ccCCCCEEEEeCCCCCCCCEEEEec-------------------CCCCEEEEeccC-CcEEEEEEEeCC--eE
Confidence 2679999999999999999999998 257899999999 899999999853 34
Q ss_pred EEeeeeccccccccceEEEEccCCCCCHHHHHHHHHHHHHHHHHc-CCCCeEEEEEEEcCCCcEEEEeeCCCCCCchhHH
Q psy15244 278 VHLYERDCSMQRRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSL-GYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHTLS 356 (1427)
Q Consensus 278 v~l~erd~s~qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~al-g~~G~~~VEflvd~dG~~yfIEINpRl~ge~~vt 356 (1427)
..+.... .....+.......|+ .++++..+++.+.+.++++++ |+.|.+++||+++ |++||+|||||++++....
T Consensus 181 ~~~~~~~-~~~~~~~~~g~~~p~-~l~~~~~~~i~~~a~~~~~~l~g~~G~~~vD~~~~--~~~~viEiNpR~~~~~~~~ 256 (305)
T 3df7_A 181 KCLSVNE-QIINNFRYAGAVVPA-RISDEVKREVVEEAVRAVECVEGLNGYVGVDIVYS--DQPYVIEINARLTTPVVAF 256 (305)
T ss_dssp EEEEEEE-EEEETTEEEEEEESC-CCCHHHHHHHHHHHHHHHTTSTTCCEEEEEEEEES--SSEEEEEEESSCCGGGGGH
T ss_pred EEEEEee-EeccCceeccccccC-CCCHHHHHHHHHHHHHHHHHcCCCcCceEEEEEEC--CCEEEEEEcCCCCCCHHHH
Confidence 4333211 111112233456787 589999999999999999999 9999999999996 6699999999999987777
Q ss_pred HHHhCCCHHHHHHHH
Q psy15244 357 EEITGIDVVQSQIKI 371 (1427)
Q Consensus 357 e~~tGiDLv~~~i~i 371 (1427)
+.++|+|+.++++++
T Consensus 257 ~~~~G~~~~~~~~~~ 271 (305)
T 3df7_A 257 SRAYGASVADLLAGG 271 (305)
T ss_dssp HHHHSCCHHHHHTTC
T ss_pred HHHHCCCHHHHHHhc
Confidence 889999999999987
No 74
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=99.88 E-value=2.3e-23 Score=241.96 Aligned_cols=250 Identities=14% Similarity=0.134 Sum_probs=171.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCcc-CccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEeC
Q psy15244 59 KILIANRSEVAIRVARACNEMGIKSVGIYSEQDKF-SAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHPG 137 (1427)
Q Consensus 59 kVLIagrGeia~riiraa~elGi~~vav~s~~d~~-s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~pg 137 (1427)
+|.++|+| .++.++++|+++|++|++++..++.. .+....||+.+.++ .|.| +++ ..|.|.|-
T Consensus 4 ~I~~lGsg-l~~~~~~aAk~lG~~viv~d~~~~~p~~~a~~~ad~~~~~~-------~~~d------l~~--~~dvitpe 67 (320)
T 2pbz_A 4 IVSTIASH-SSLQILLGAKKEGFKTRLYVSPKRRPFYSSLPIVDDLVVAE-------EMTS------ILN--DDGIVVPH 67 (320)
T ss_dssp CEEEESST-THHHHHHHHHHTTCCEEEEECTTTHHHHHTCTTCSEEEECS-------CSCC------TTC--CSSBCCCB
T ss_pred EEEEEcCH-hHHHHHHHHHHCCCEEEEEECCCCCccchhhhcCCeEEECC-------cHHH------HHh--cCCEEEec
Confidence 59999999 99999999999999999998876521 12667899998864 2444 222 34777654
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeecC
Q psy15244 138 YGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAAF 217 (1427)
Q Consensus 138 ~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~~ 217 (1427)
.++.. ....+.|++.|++++ |+++++....||...|++|+++|||+|+++ . .+++ +++||+||||..
T Consensus 68 ~e~v~--~~~l~~le~~~~p~~-p~~~~l~~~~dr~~~~~~l~~~Gip~P~~~--~---~ee~-----~i~~PviVKp~~ 134 (320)
T 2pbz_A 68 GSFVA--YLGIEAIEKAKARFF-GNRRFLKWETTFELQDKALEGAGIPRVEVV--E---PEDA-----KPDELYFVRIEG 134 (320)
T ss_dssp TTHHH--HSCHHHHHTCCSCCB-SCSSGGGGGSCHHHHHHHHHHHTCCBCCBC--C---SCCC-----CSSCCEEEECC-
T ss_pred ccchh--HHHHHHHHHcCCCcC-CCHHHHHHHHhHHHHHHHHHHCCcCCCCee--C---HhHc-----CcCCcEEEEECC
Confidence 43221 112345678999865 778999999999999999999999999986 1 2232 589999999999
Q ss_pred CCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEec-ccccEEEeeeec-ccc--------
Q psy15244 218 GGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGD-KYGDVVHLYERD-CSM-------- 287 (1427)
Q Consensus 218 GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~D-g~G~vv~l~erd-~s~-------- 287 (1427)
|+||+|+++++| +||..+++.+ + .+++|||||+ +.++++.++.+ -.|++..++.++ +..
T Consensus 135 g~ggkG~~~v~~-eel~~~~~~~--------~-~~~IiEEfI~-g~~~~~~~f~~~~~g~~e~~~~~~r~e~~~g~~~~p 203 (320)
T 2pbz_A 135 PRGGSGHFIVEG-SELEERLSTL--------E-EPYRVERFIP-GVYLYVHFFYSPILERLELLGVDERVLIADGNARWP 203 (320)
T ss_dssp -----------C-EECSCCCC-------------CCEEEECCC-SCEEEEEEEEETTTTEEEEEEEEEEEETTCSSSSSC
T ss_pred CCCCCCEEEECh-HHHHHHHHhc--------C-CCEEEEeeec-eEecceeEEeccccCceeEEEecceEEEECCeeecc
Confidence 999999999999 9998766443 1 4799999999 44456656654 234444433211 111
Q ss_pred --ccccceEEEEccCCCCCHHHHHHHHHHHHHHHHHc------CCCCeEEEEEEEcCCCcEEEEeeCCCCCCc
Q psy15244 288 --QRRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSL------GYSNAGTVEFLLDKDDNFYFIEVNPRLQVE 352 (1427)
Q Consensus 288 --qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~al------g~~G~~~VEflvd~dG~~yfIEINpRl~ge 352 (1427)
.+.+....+. |+ .++++..+++.+.+.++++++ |+.|++++| ++++|++|++|||||++|+
T Consensus 204 ~~~~~~~~~G~~-P~-~~~~~~~~~a~~~a~~i~~~L~~l~~~g~~G~~~vE--~~~dg~~~v~EIapR~~GG 272 (320)
T 2pbz_A 204 VKPLPYTIVGNR-AI-ALRESLLPQLYDYGLAFVRTMRELEPPGVIGPFALH--FAYDGSFKAIGIASRIDGG 272 (320)
T ss_dssp CSCCCCCEEEEE-EC-EECGGGHHHHHHHHHHHHHHHHHHSTTCCCSEEEEE--EECSSSCEEEEEESSBCSG
T ss_pred cCCCceeeecCC-CC-ccCHHHHHHHHHHHHHHHHHHHhhccCCceeeEEEE--EcCCCcEEEEEecCCCCCC
Confidence 1111222222 77 478888899999999999999 999999999 5777889999999999986
No 75
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=99.82 E-value=8.4e-20 Score=211.42 Aligned_cols=287 Identities=12% Similarity=0.063 Sum_probs=186.0
Q ss_pred CEEEEEcCC--------HHHHHHHHHHHHcCCEEEEEecCCCccCccccccce-EEEcCCCCCcccCCCC--HHHHHHHH
Q psy15244 58 EKILIANRS--------EVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQ-AFLVGKGMPPVAAYLN--IPEIICIA 126 (1427)
Q Consensus 58 kkVLIagrG--------eia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe-~~~i~~~~~~~~~yld--i~~Ii~ia 126 (1427)
+||+|+..+ ..+..++++++++|++++.++............++. .+.+. + .. ..+.. .+.++
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~--- 75 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVK-Q-NY-EEWFSFVGEQDL--- 75 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGGEEEETTEEEEEEEEEEEC-S-CS-SCCEEEEEEEEE---
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchhHeEEECCeEEEEEeeeEec-c-Cc-ccceeccCcccc---
Confidence 478887765 346789999999999999887653321111111221 11121 0 00 11111 00001
Q ss_pred HhcCCCEEEeCCCccc--cc---HHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHH
Q psy15244 127 KNNNVDAIHPGYGFLS--ER---EDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVK 201 (1427)
Q Consensus 127 ~~~~vDaI~pg~gfls--E~---~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~ 201 (1427)
...++|+|++..+.-. |. ..+.+.++..|++++ ++++++..+.||..++++++ |+|++. .+.+.+++.
T Consensus 76 ~~~~~d~v~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~dK~~~~~~l~----~~P~t~--~~~~~~~~~ 148 (316)
T 1gsa_A 76 PLADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIV-NKPQSLRDCNEKLFTAWFSD----LTPETL--VTRNKAQLK 148 (316)
T ss_dssp EGGGSSEEEECCCCCCCHHHHHHHHHHHHHHHTTCEEE-SCHHHHHHCCTTGGGGGGTT----TSCCEE--EESCHHHHH
T ss_pred ccccCCEEEEecCCCCchhhHHHHHHHHHHHHcCCeEe-cCHHHHHhhhhHHHHHhhhh----cCCCeE--EeCCHHHHH
Confidence 1135899999754221 12 256677778999876 78999999999999999887 999986 678899999
Q ss_pred HHHHhcCCcEEEeecCCCCCcCeEEec-CHHHHHHHHHHHHHHHHHccCCCcEEEEeeccC--CceEEEEEEecccccEE
Q psy15244 202 EFCDEVEFPVILKAAFGGGGRGMRMVA-NKDAIEENFKRAQSEALASFGKDDMLVEKYIDR--PRHIEVQILGDKYGDVV 278 (1427)
Q Consensus 202 ~~a~~iGyPvVVKP~~GgGGrGV~iV~-s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeg--greieVqvl~Dg~G~vv 278 (1427)
++++++| |+|+||..|+||+||++++ +.+++..+++... ..+...+++|+||++ +.++++.++ + |+++
T Consensus 149 ~~~~~~~-p~vvKP~~g~~g~Gv~~v~~~~~~l~~~~~~~~-----~~~~~~~lvqe~i~~~~~~~~~v~~~-~--g~~~ 219 (316)
T 1gsa_A 149 AFWEKHS-DIILKPLDGMGGASIFRVKEGDPNLGVIAETLT-----EHGTRYCMAQNYLPAIKDGDKRVLVV-D--GEPV 219 (316)
T ss_dssp HHHHHHS-SEEEECSSCCTTTTCEEECTTCTTHHHHHHHHT-----TTTTSCEEEEECCGGGGGCEEEEEEE-T--TEEC
T ss_pred HHHHHcC-CEEEEECCCCCcccEEEecCChHHHHHHHHHHH-----hcCCceEEEecccCCCCCCCEEEEEE-C--CEEe
Confidence 9999999 9999999999999999998 8889887775431 123468999999996 455555554 2 4444
Q ss_pred E-eeeeccc---cccccceEEEEccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcCCCcEEEEeeCCCCCCchh
Q psy15244 279 H-LYERDCS---MQRRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDKDDNFYFIEVNPRLQVEHT 354 (1427)
Q Consensus 279 ~-l~erd~s---~qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~dG~~yfIEINpRl~ge~~ 354 (1427)
. ...|... ...+...-....|. .++++. .++...+.+.++++|+ +.+.+||+ |. ||||||+|.+++..
T Consensus 220 ~~~~~r~~~~~~~~~~~~~gg~~~~~-~~~~~~-~~~a~~~~~~l~~~g~-~~~~vD~~----g~-~~iEvN~r~~~~~~ 291 (316)
T 1gsa_A 220 PYCLARIPQGGETRGNLAAGGRGEPR-PLTESD-WKIARQIGPTLKEKGL-IFVGLDII----GD-RLTEINVTSPTCIR 291 (316)
T ss_dssp SEEEEEECCSSCSCCCGGGTCEEEEE-ECCHHH-HHHHHHHHHHHHHTTC-CEEEEEEE----TT-EEEEEECSSCCCHH
T ss_pred eeEEEEeCCCCCceeEEccCCccccC-CCCHHH-HHHHHHHHHHHHhCCC-cEEEEEec----CC-EEEEEcCCCCcchH
Confidence 3 3333211 11110000112344 355433 2333334444445677 56789998 54 89999999765666
Q ss_pred HHHHHhCCCHHHHHHHHHcC
Q psy15244 355 LSEEITGIDVVQSQIKIAQG 374 (1427)
Q Consensus 355 vte~~tGiDLv~~~i~iA~G 374 (1427)
.++..+|+|+.+..++...+
T Consensus 292 ~~~~~~g~~~~~~~~~~~~~ 311 (316)
T 1gsa_A 292 EIEAEFPVSITGMLMDAIEA 311 (316)
T ss_dssp HHHHHSSCCHHHHHHHHHHH
T ss_pred HHHHhhCcCHHHHHHHHHHH
Confidence 77788999999999887654
No 76
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.78 E-value=1.8e-19 Score=230.00 Aligned_cols=240 Identities=18% Similarity=0.196 Sum_probs=180.8
Q ss_pred CCHHHHHHHHHhcCCCEEEeCCCcccccHHHHHHHHHC-------CCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCC
Q psy15244 117 LNIPEIICIAKNNNVDAIHPGYGFLSEREDFAKAVIGA-------GLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPG 189 (1427)
Q Consensus 117 ldi~~Ii~ia~~~~vDaI~pg~gflsE~~~~a~~~e~~-------Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~ 189 (1427)
.+.+.|+++|++.++|+++.+ ++..|++++... |+...||+..++..++||..+|++|+++|||+|++
T Consensus 433 ~st~~Iv~~A~~~gid~~vlg-----~e~~l~~lg~~~~~~~ig~~~~t~~~s~~aa~~~~DK~~tk~lL~~~GIPvP~~ 507 (757)
T 3ln7_A 433 LSTQALLFDVIQKGIHTEILD-----ENDQFLCLKYGDHIEYVKNGNMTSHDSYISPLIMENKVVTKKVLQKAGFNVPQS 507 (757)
T ss_dssp HHHHHHHHHHHHHTCEEEEEE-----TTTTEEEEEETTEEEEEETTTBCSSSBSHHHHHHHHSHHHHHHHHHHTCCCCCE
T ss_pred CCHHHHHHHHHHhCCCEEEEC-----CCHHHHHhcccccceeeccCccCCCCHHHHHHHhcCHHHHHHHHHHCCcCCCCE
Confidence 457899999999999999755 333344333333 34344677899999999999999999999999999
Q ss_pred ccccCCCHHHHHHHH-HhcCCcEEEeecCCCCCcCeEEe----cCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCce
Q psy15244 190 TTEPVTDVDKVKEFC-DEVEFPVILKAAFGGGGRGMRMV----ANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRH 264 (1427)
Q Consensus 190 ~~~~v~s~eea~~~a-~~iGyPvVVKP~~GgGGrGV~iV----~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggre 264 (1427)
. .+.+.+++.+++ +.+|||+||||..|+||+||+++ ++.+++.++++.+... +..++||+||+ |+|
T Consensus 508 ~--~~~~~~ea~~~~~~~~g~PvVVKP~~g~~G~GV~iv~~~v~~~eel~~al~~a~~~------~~~vlVEefI~-G~E 578 (757)
T 3ln7_A 508 V--EFTSLEKAVASYALFENRAVVIKPKSTNYGLGITIFQQGVQNREDFAKALEIAFRE------DKEVMVEDYLV-GTE 578 (757)
T ss_dssp E--EESCHHHHHHGGGGSSSSCEEEEESSCSTTTTCEECSSCCCCHHHHHHHHHHHHHH------CSSEEEEECCC-SEE
T ss_pred E--EECCHHHHHHHHHHhcCCCEEEEeCCCCCCCCeEEecCCCCCHHHHHHHHHHHHhc------CCcEEEEEcCC-CcE
Confidence 7 688999987776 78999999999999999999999 8999999999877543 56899999999 799
Q ss_pred EEEEEEecccccEEEeeeecccc-------------------ccc----------------------------------c
Q psy15244 265 IEVQILGDKYGDVVHLYERDCSM-------------------QRR----------------------------------Y 291 (1427)
Q Consensus 265 ieVqvl~Dg~G~vv~l~erd~s~-------------------qr~----------------------------------~ 291 (1427)
++|+++++ +++...+|.... .+| .
T Consensus 579 i~v~Vlgg---kvvaai~R~p~~VvGDG~~ti~eLi~~~n~~p~rg~~~~~~l~~I~ld~~~~~~L~~~g~~~d~Vp~~G 655 (757)
T 3ln7_A 579 YRFFVLGD---ETLAVLLRVPANVVGDSVHSVAELVAMKNDHPLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKD 655 (757)
T ss_dssp EEEEEETT---EEEEEEEECCSEEEGGGCCCHHHHHHHHHTSTTEECSSSSSEECCCCCHHHHHHHHHHTCCSSSCCCSS
T ss_pred EEEEEECC---EEEEEEEEecccccCCCcccHHHHHHhhcccccccccccCccccccccHHHHHHHHHcCCCccccCCCC
Confidence 99999854 577666653210 000 0
Q ss_pred ceEEE-----E---ccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcC--------CCcEEEEeeCCCCCCc-hh
Q psy15244 292 QKVIQ-----I---APAQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDK--------DDNFYFIEVNPRLQVE-HT 354 (1427)
Q Consensus 292 qk~ie-----~---aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~--------dG~~yfIEINpRl~ge-~~ 354 (1427)
+.+.- . +-+...++++.+++.+.|.++++++|+. .+.||++.++ .+.+.+||+|++++-. |.
T Consensus 656 e~v~L~~~~Nls~GG~~~dvtd~i~p~~~~~a~~aa~~lGl~-~~GvDli~~di~~p~~~~~~~~~iiEvN~~P~~~~h~ 734 (757)
T 3ln7_A 656 QLVQLRANSNISTGGDSIDMTDEMHESYKQLAVGITKAMGAA-VCGVDLIIPDLKQPATPNLTSWGVIEANFNPMMMMHI 734 (757)
T ss_dssp CEEECCSSCCGGGTCCEEECTTTSCHHHHHHHHHHHHHHTCS-EEEEEEEESCSSSCCCSSTTTCEEEEEESSCCHHHHH
T ss_pred CEEEeecccccccCccceeccccCCHHHHHHHHHHHHHhCCC-EEEEEEEecCccccccccCCCeEEEEEcCCcchhhhh
Confidence 00000 0 0011234456678889999999999996 8889999872 3468999999999844 33
Q ss_pred HHHHHhCCCHHHHHHHHHcC
Q psy15244 355 LSEEITGIDVVQSQIKIAQG 374 (1427)
Q Consensus 355 vte~~tGiDLv~~~i~iA~G 374 (1427)
.....+|.|+.+..+.....
T Consensus 735 ~p~~g~~~~v~~~ii~~lfp 754 (757)
T 3ln7_A 735 FPYAGKSRRLTQNVIKMLFP 754 (757)
T ss_dssp SCSSSCCCCCHHHHHHHHCT
T ss_pred ccccCCCCchHHHHHHHhcC
Confidence 33345799999998887653
No 77
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=99.76 E-value=1.8e-18 Score=201.97 Aligned_cols=242 Identities=14% Similarity=0.190 Sum_probs=167.9
Q ss_pred CCEEEEEcCC-HHHHHHHHHHHHcCCEE--EEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCE
Q psy15244 57 MEKILIANRS-EVAIRVARACNEMGIKS--VGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDA 133 (1427)
Q Consensus 57 ~kkVLIagrG-eia~riiraa~elGi~~--vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDa 133 (1427)
++||+|+... .....++++++++|+++ +.++.+.. +. +.. ..+|+
T Consensus 11 ~m~i~il~~~~~~s~~l~~al~~~G~~v~~~~~d~~~~--------------~~--------~~~----------~~~d~ 58 (324)
T 1z2n_X 11 TVSLFIWLPESKQKTLFISTKNHTQFELNNIIFDVTLS--------------TE--------LPD----------KEPNA 58 (324)
T ss_dssp EEEEEEECCHHHHHHHBSSCCSEEEEEETTEEEEEEEE--------------SS--------CCS----------SCCSE
T ss_pred cEEEEEEEchhhhhhhHHHHHHhcCcEEEEEEecCCCC--------------cc--------ccC----------CCceE
Confidence 3478888742 23337788899999998 88865210 00 000 15788
Q ss_pred EEeCCCcc-cccHHHHHHHHH--CCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhc--C
Q psy15244 134 IHPGYGFL-SEREDFAKAVIG--AGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEV--E 208 (1427)
Q Consensus 134 I~pg~gfl-sE~~~~a~~~e~--~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~i--G 208 (1427)
|++..+.. .+.....+.++. .|+++ +++++++..+.||..++++++++|||+|++. .+.+.+++.+++++. +
T Consensus 59 v~~~~~~~~~~~~~~l~~~~~~~~g~~~-~~~~~~~~~~~dK~~~~~~l~~~gi~~P~~~--~~~~~~~~~~~~~~~~~~ 135 (324)
T 1z2n_X 59 IITKRTHPVGKMADEMRKYEKDHPKVLF-LESSAIHDMMSSREEINALLIKNNIPIPNSF--SVKSKEEVIQLLQSKQLI 135 (324)
T ss_dssp EEECCSCSSSHHHHHHHHHHHHCTTSEE-ETCHHHHHHHTBHHHHHHHHHHTTCCCSCEE--EESSHHHHHHHHHTTCSC
T ss_pred EEEeccchHHHHHHHHHHHHHhCCCCeE-eCCHHHHHHHhCHHHHHHHHHHCCCCCCCEE--EeCCHHHHHHHHHHcCCC
Confidence 88864321 121222333333 78885 5899999999999999999999999999986 678888988888775 4
Q ss_pred CcEEEeecCCCCC---cCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccC-CceEEEEEEecccccEEEeeeec
Q psy15244 209 FPVILKAAFGGGG---RGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDR-PRHIEVQILGDKYGDVVHLYERD 284 (1427)
Q Consensus 209 yPvVVKP~~GgGG---rGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeg-greieVqvl~Dg~G~vv~l~erd 284 (1427)
||+|+||..|+|| +|++++++.++|.. . +.++++|+||++ ++++++.++++ .++....+.
T Consensus 136 ~P~vvKP~~g~g~~~s~gv~~v~~~~~l~~------------~-~~~~lvqe~i~~~g~~~~v~v~g~---~~~~~~~~~ 199 (324)
T 1z2n_X 136 LPFIVKPENAQGTFNAHQMKIVLEQEGIDD------------I-HFPCLCQHYINHNNKIVKVFCIGN---TLKWQTRTS 199 (324)
T ss_dssp SSEEEEESBCSSSSGGGEEEEECSGGGGTT------------C-CSSEEEEECCCCTTCEEEEEEETT---EEEEEEECC
T ss_pred CCEEEeeCCCCCCccceeeEEEeCHHHHhh------------c-CCCEEEEEccCCCCcEEEEEEECC---EEEEEEecC
Confidence 9999999999999 99999999888652 1 478999999985 57888877643 344432221
Q ss_pred cc-ccc-----------------------------------ccceEEEEccCCCCCHHHH-HHHHHHHHHHHHHcCCCCe
Q psy15244 285 CS-MQR-----------------------------------RYQKVIQIAPAQDMSVSVR-DAITETSVRLAKSLGYSNA 327 (1427)
Q Consensus 285 ~s-~qr-----------------------------------~~qk~ie~aPa~~l~~e~~-~~l~~~a~~l~~alg~~G~ 327 (1427)
.. +.. ....-....+. .+.... +++.+.|.++++++|+. .
T Consensus 200 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~a~~~~~~lg~~-~ 276 (324)
T 1z2n_X 200 LPNVHRCGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILEDPI--LLNLTSEAEMRDLAYKVRCALGVQ-L 276 (324)
T ss_dssp CCCCCCSSCCEEEEETTBGGGGGGSCTTSSCHHHHHHHHTTTTCCCBCSCTT--TTTSCCHHHHHHHHHHHHHHHTCS-E
T ss_pred cccccCCCccceeeccccchhhhccccccccccccccccccchhhccccCCc--cccCCCHHHHHHHHHHHHHHhCCc-E
Confidence 10 000 00000000111 122222 68999999999999997 7
Q ss_pred EEEEEEEc-CCCcEEEEeeCCCCCCc
Q psy15244 328 GTVEFLLD-KDDNFYFIEVNPRLQVE 352 (1427)
Q Consensus 328 ~~VEflvd-~dG~~yfIEINpRl~ge 352 (1427)
+++||+++ ++|++||||||||++..
T Consensus 277 ~~vD~~~~~~~g~~~vlEvN~~Pg~~ 302 (324)
T 1z2n_X 277 CGIDFIKENEQGNPLVVDVNVFPSYG 302 (324)
T ss_dssp EEEEEECGGGCSSCEEEEEEESCCTT
T ss_pred EeeEEEEEcCCCCEEEEEEcCCCCcC
Confidence 89999998 46899999999998743
No 78
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=99.75 E-value=1.6e-17 Score=209.94 Aligned_cols=175 Identities=23% Similarity=0.389 Sum_probs=131.3
Q ss_pred Cccc-cccccChhhHHHHHhHhhhcCCCCCCCchhcccccccccccCCccccccccCccchhhhhcCchhHHHHHHHhhc
Q psy15244 1121 EPFK-MNKLIFPKATKKFMKFRDEFGPVDKLPTRIFFHALERKAEFDPIMACDCRENEPVKMNELIFPKATKKFMKFRDE 1199 (1427)
Q Consensus 1121 ~~~d-~~~~~~p~~~~~~~~~~~~~g~~~~l~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 1199 (1427)
.+.| +.++|||++..+|.+.+++||+++.|||+.||.||+.||++. +..++
T Consensus 543 ~~ed~l~~~~~p~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~-v~i~~--------------------------- 594 (718)
T 3bg3_A 543 TPEDVLSAAMYPDVFAHFKDFTATFGPLDSLNTRLFLQGPKIAEEFE-VELER--------------------------- 594 (718)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHSCCCTTSCHHHHHHCCCBTCEEE-EECTT---------------------------
T ss_pred CHHHHHHHHhCchhHHHHHHHHHhcCCcccCcchhhhcCCCcCceee-eeccc---------------------------
Confidence 3345 778899999999999999999999999999999999999986 44444
Q ss_pred cCCCCCCCcccccCCCCCCcEEEEEeeCCcEEEeeecccccccccCcceeEEEEeccceeeeeeccccccccCCCchhhh
Q psy15244 1200 FGPVDKLPTRIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGLHTTNTYNLQQILKTSPSDVFAF 1279 (1427)
Q Consensus 1200 ~~~~~~l~~~~f~~g~~~g~~~~v~~~~Gk~~~i~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 1279 (1427)
|.++.+.+ ..+. ..+.++.|+++|++||+.+.+++.+...-... ...+
T Consensus 595 ------------------Gk~~~i~l-----~~i~------~~~~~g~~~~~vevnG~~~~v~v~~~~~~~~~---~~~~ 642 (718)
T 3bg3_A 595 ------------------GKTLHIKA-----LAVS------DLNRAGQRQVFFELNGQLRSILVKDTQAMKEM---HFHP 642 (718)
T ss_dssp ------------------SCEEEEEE-----EEEE------EECTTSEEEEEEESSSSEEEEEEECGGGTCC--------
T ss_pred ------------------CceeEEEe-----cccC------CcccCCcEEEEEEECCEEEEEEEeccCccccc---cccc
Confidence 88888855 2333 23457889999999999999999887532111 1122
Q ss_pred hcccccceeccCCCCCcceeeeeecCCcceEEEeecccccccCCceEEEEEECCEEeEechhhhhhhhccccCCCCCCCc
Q psy15244 1280 LRLKSERIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGQLRSLDKNKAKKLKLRSKADSDTAGE 1359 (1427)
Q Consensus 1280 ~~~~s~~v~v~~~~~g~~~~~~v~~Gd~~~~~~~~i~~~~~~~g~r~v~~elnG~~~~vd~~~~~~~~~~~~a~~~~~~~ 1359 (1427)
+........|.++|.|...+|.++.|+.+ .. |..-..++- ......
T Consensus 643 ~a~~~~~~~v~ap~~G~V~~v~V~~Gd~V-----------~~-Gq~L~~iEa----------------------mKme~~ 688 (718)
T 3bg3_A 643 KALKDVKGQIGAPMPGKVIDIKVVAGAKV-----------AK-GQPLCVLSA----------------------MKMETV 688 (718)
T ss_dssp CCCCCSSSCEECSSCEEEEEECSCTTCCB-----------CT-TCCCEEEES----------------------SSCEEE
T ss_pred cCCCCCCceEeCCCCeEEEEEEeCCCCee-----------CC-CCEEEEEec----------------------ccceeE
Confidence 33334456799999999999999999987 22 322222220 012457
Q ss_pred eecCCCeEEEEEEecCCCEEecCCEEEEEE
Q psy15244 1360 IGAPMPGNIIEVKVKVGQQVKKNDVLIVMS 1389 (1427)
Q Consensus 1360 V~APm~G~v~~v~V~~Gd~V~~G~~l~~ie 1389 (1427)
|.||..|+|.++.|++||.|..||+|++||
T Consensus 689 I~Ap~~G~V~~i~v~~G~~V~~G~~L~~i~ 718 (718)
T 3bg3_A 689 VTSPMEGTVRKVHVTKDMTLEGDDLILEIE 718 (718)
T ss_dssp ECCCCCBCBCCCCCCSEEEECSSCEEECBC
T ss_pred EecCCCeEEEEEecCCCCEeCCCCEEEEeC
Confidence 999999999999999999999999999874
No 79
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=99.75 E-value=3.5e-17 Score=218.15 Aligned_cols=172 Identities=18% Similarity=0.333 Sum_probs=136.8
Q ss_pred cccccChhhHHHHHhHhhhcCCCCCCCchhcccccccccccCCccccccccCccchhhhhcCchhHHHHHHHhhccCCCC
Q psy15244 1125 MNKLIFPKATKKFMKFRDEFGPVDKLPTRIFFHALERKAEFDPIMACDCRENEPVKMNELIFPKATKKFMKFRDEFGPVD 1204 (1427)
Q Consensus 1125 ~~~~~~p~~~~~~~~~~~~~g~~~~l~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1204 (1427)
+.++|||++..+|.+.+++||+++.|||++||.|+++||++. ++.+.
T Consensus 976 ~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------------------------- 1022 (1150)
T 3hbl_A 976 ISYVLYPKVYEQYIQTRNQYGNLSLLDTPTFFFGMRNGETVE-IEIDK-------------------------------- 1022 (1150)
T ss_dssp HHHHHSHHHHHHHHHHHHHHCCGGGSCHHHHHHCCCTTCEEE-EEEET--------------------------------
T ss_pred HHHHcCCHHHHHHHHHHHhcCCcccCCchhhhcCCCCCceEE-EEccC--------------------------------
Confidence 677899999999999999999999999999999999999986 44444
Q ss_pred CCCcccccCCCCCCcEEEEEeeCCcEEEeeecccccccccCcceeEEEEeccceeeeeeccccccccCCCchhhhhcccc
Q psy15244 1205 KLPTRIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGLHTTNTYNLQQILKTSPSDVFAFLRLKS 1284 (1427)
Q Consensus 1205 ~l~~~~f~~g~~~g~~~~v~~~~Gk~~~i~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~s 1284 (1427)
|+++.+.+. .+. ..+.++.|++||++||+.+.+.+.+........ ..++...+
T Consensus 1023 -------------g~~~~i~l~-----~~~------~~~~~g~~~~~~e~nG~~~~v~v~~~~~~~~~~---~~~~~~~~ 1075 (1150)
T 3hbl_A 1023 -------------GKRLIIKLE-----TIS------EPDENGNRTIYYAMNGQARRIYIKDENVHTNAN---VKPKADKS 1075 (1150)
T ss_dssp -------------TEEEEEEEE-----EEC------CCCTTSEEEEEEEETTEEEEEEEECCCSSSCCC---CCCBCCTT
T ss_pred -------------CcEEEEEec-----ccC------CCCCCCceEEEEEECCeEEEEeccccccccccc---ccccCCCC
Confidence 888888553 444 355679999999999999999999886543211 23444456
Q ss_pred cceeccCCCCCcceeeeeecCCcceEEEeecccccccCCceEEEEEECCEEeEechhhhhhhhccccCCCCCCCceecCC
Q psy15244 1285 ERIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGQLRSLDKNKAKKLKLRSKADSDTAGEIGAPM 1364 (1427)
Q Consensus 1285 ~~v~v~~~~~g~~~~~~v~~Gd~~~~~~~~i~~~~~~~g~r~v~~elnG~~~~vd~~~~~~~~~~~~a~~~~~~~V~APm 1364 (1427)
....|.++|.|..++|.+++|+.+ .. |..-+.+|- . .....|.||.
T Consensus 1076 ~~~~v~ap~~G~v~~~~v~~Gd~V-----------~~-G~~l~~iea---------------------m-K~~~~i~ap~ 1121 (1150)
T 3hbl_A 1076 NPSHIGAQMPGSVTEVKVSVGETV-----------KA-NQPLLITEA---------------------M-KMETTIQAPF 1121 (1150)
T ss_dssp CSSEEECSSSEEEEEECCCTTCEE-----------CT-TCEEEEEES---------------------S-SCEEEEECSS
T ss_pred CCceeecCceEEEEEEEeCCCCEE-----------CC-CCEEEEEEe---------------------c-cceeEEecCC
Confidence 667899999999999999999997 23 332222221 1 1346799999
Q ss_pred CeEEEEEEecCCCEEecCCEEEEEEc
Q psy15244 1365 PGNIIEVKVKVGQQVKKNDVLIVMSV 1390 (1427)
Q Consensus 1365 ~G~v~~v~V~~Gd~V~~G~~l~~iea 1390 (1427)
.|+|.+++|++||.|+.||+|++|+.
T Consensus 1122 ~G~v~~i~v~~G~~V~~g~~l~~i~~ 1147 (1150)
T 3hbl_A 1122 DGVIKQVTVNNGDTIATGDLLIEIEK 1147 (1150)
T ss_dssp SEEEEEECCCTTCEECTTBEEEEEC-
T ss_pred CeEEEEEEeCCCCEeCCCCEEEEEec
Confidence 99999999999999999999999973
No 80
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=99.71 E-value=1.4e-17 Score=186.52 Aligned_cols=177 Identities=12% Similarity=0.195 Sum_probs=139.4
Q ss_pred CCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeecCC-----CCCcCeEE-ecCHHHHHHHHHHHHHH
Q psy15244 170 GDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAAFG-----GGGRGMRM-VANKDAIEENFKRAQSE 243 (1427)
Q Consensus 170 ~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~~G-----gGGrGV~i-V~s~eeL~~a~~~a~~e 243 (1427)
-||..+|++++++|||+|++. .+.+.+++.++++++|||+||||..+ ++|.|+++ ++|.+|+.++++.+...
T Consensus 20 l~k~~~k~ll~~~GIp~p~~~--~~~~~~ea~~~a~~lg~PvvvKp~~~~~~~r~~~gGv~~~v~~~~el~~a~~~~~~~ 97 (238)
T 1wr2_A 20 MVEYEAKQVLKAYGLPVPEEK--LAKTLDEALEYAKEIGYPVVLKLMSPQILHKSDAKVVMLNIKNEEELKKKWEEIHEN 97 (238)
T ss_dssp ECHHHHHHHHHTTTCCCCCCE--EESSHHHHHHHHHHHCSSEEEEEECTTCCCHHHHTCEEEEECSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCcCCCCeE--EeCCHHHHHHHHHHhCCCEEEEEccCCCCcCCccCCEEEeCCCHHHHHHHHHHHHHh
Confidence 499999999999999999997 68899999999999999999999999 77889998 79999999999998877
Q ss_pred HHHccC---CCcEEEEeeccCCceEEEEEEecc-cccEEEeeeeccccccccceEEEEccCCCCCHHHHHHHHHHHHHHH
Q psy15244 244 ALASFG---KDDMLVEKYIDRPRHIEVQILGDK-YGDVVHLYERDCSMQRRYQKVIQIAPAQDMSVSVRDAITETSVRLA 319 (1427)
Q Consensus 244 a~~~fg---~~~vlVEeyIeggreieVqvl~Dg-~G~vv~l~erd~s~qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~ 319 (1427)
....++ ...++||+||++++|+++.++.|. .|.++.++.....+...........| ++++..++|.+.+.++.
T Consensus 98 ~~~~~~~~~~~~vlVEe~i~~g~E~~v~v~~d~~~g~v~~~~~Gg~~iE~~~d~~~~~~P---l~~~~~~~~~~~~~~~~ 174 (238)
T 1wr2_A 98 AKKYRPDAEILGVLVAPMLKPGREVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVP---ITEKDARKMIQEIKAYP 174 (238)
T ss_dssp HHHHCTTCCCCEEEEEECCCCCEEEEEEEEEETTTEEEEEEEECSTTHHHHCCCEEEESS---CCHHHHHHHHHTSTTHH
T ss_pred hhhhCCCCccceEEEEECCCCCeEEEEEEEeCCCCCcEEEEecCCceeeeecceeeecCC---CCHHHHHHHHHHHHHHH
Confidence 655444 368999999998999999999997 67777665421122111122333334 89999999999999999
Q ss_pred HHcCCCCeEEEEE-------------EEcCCCcEEEEeeCCCCCC
Q psy15244 320 KSLGYSNAGTVEF-------------LLDKDDNFYFIEVNPRLQV 351 (1427)
Q Consensus 320 ~alg~~G~~~VEf-------------lvd~dG~~yfIEINpRl~g 351 (1427)
..+||+|...+++ +.+.+++++++||||++-.
T Consensus 175 ~~~g~~G~~~~d~~~l~~~l~~l~~~~~~~~~~~~~lEINPl~~~ 219 (238)
T 1wr2_A 175 ILAGARGEEPADIDAIVDMLLKVSKLVDDLKDYIKEMDLNPVFVY 219 (238)
T ss_dssp HHHCC--CCCBCHHHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEC
T ss_pred HhcCCCCCChhhHHHHHHHHHHHHHHHHcCCCCeEEEeccCeEEe
Confidence 9999999755552 2233334999999998753
No 81
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.71 E-value=8.3e-18 Score=215.35 Aligned_cols=241 Identities=17% Similarity=0.206 Sum_probs=174.2
Q ss_pred CHHHHHHHHHhcCCCEEEeC--CCcccccHHHHHH-HHHCCCceeCCC-HHHHHHhCCHHHHHHHHHhCCCCCCCCcccc
Q psy15244 118 NIPEIICIAKNNNVDAIHPG--YGFLSEREDFAKA-VIGAGLEFIGPA-PNVLKTLGDKVLARDAALKADVPIIPGTTEP 193 (1427)
Q Consensus 118 di~~Ii~ia~~~~vDaI~pg--~gflsE~~~~a~~-~e~~Gi~fiGps-~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~ 193 (1427)
+.+.|++.|++.|+++++.+ .+++......... +...++ .|++ ..++..++||..+|++++++|||+|++. .
T Consensus 429 S~~~l~~aA~~~Gi~v~vidp~~~l~~l~~~~~~~~~~~g~i--tg~~~~~a~~~~~DK~~tk~lL~~~GIPvP~~~--~ 504 (750)
T 3ln6_A 429 STQLLLFDVIQKGVNFEVLDEQDQFLKLWHNSHIEYVKNGNM--TSKDNYIVPLAMANKVVTKKILDEKHFPTPFGD--E 504 (750)
T ss_dssp HHHHHHHHHHHHTCEEEESCSSSCEEEEEETTEEEEEETTTB--CTTSCTHHHHHTTTSHHHHHHHHHTTCCCCCCC--C
T ss_pred cHHHHHHHHHhCCCCEEEECCCchHhhhccCCCcEEEecCCe--eCCCHHHHHHHHhCHHHHHHHHHHCCcCCCCEE--E
Confidence 46899999999999997755 4454333211101 101223 3444 4466777899999999999999999997 6
Q ss_pred CCCHHHHHHHH-HhcCCcEEEeecCCCCCcCeEEec---CHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEE
Q psy15244 194 VTDVDKVKEFC-DEVEFPVILKAAFGGGGRGMRMVA---NKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQI 269 (1427)
Q Consensus 194 v~s~eea~~~a-~~iGyPvVVKP~~GgGGrGV~iV~---s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqv 269 (1427)
+.+.+++.+++ +.+|||+||||..|++|+||++++ +.+++.++++.+... +..++||+||+ |+|++|.+
T Consensus 505 ~~~~~ea~~~~~~~~g~PvVVKP~~G~~G~GV~iv~~~~s~eel~~a~~~~~~~------~~~vlVEefI~-G~E~~v~V 577 (750)
T 3ln6_A 505 FTDRKEALNYFSQIQDKPIVVKPKSTNFGLGISIFKTSANLASYEKAIDIAFTE------DSAILVEEYIE-GTEYRFFV 577 (750)
T ss_dssp EETTTTHHHHHHHSSSSCEEEEETTCCSSSSCEEESSCCCHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEEE
T ss_pred ECCHHHHHHHHHHhcCCcEEEEeCCCCCCCCEEEEeCCCCHHHHHHHHHHHHhh------CCcEEEEeccC-CCEEEEEE
Confidence 78888887777 778999999999999999999998 999999999877543 57899999999 89999999
Q ss_pred EecccccEEEeeeecccc------------------c-cc---cc------------------------------eEEEE
Q psy15244 270 LGDKYGDVVHLYERDCSM------------------Q-RR---YQ------------------------------KVIQI 297 (1427)
Q Consensus 270 l~Dg~G~vv~l~erd~s~------------------q-r~---~q------------------------------k~ie~ 297 (1427)
+++ +++...+|.... . ++ |. +.+..
T Consensus 578 vgg---~vvaa~~r~p~~v~GdG~~tI~eLI~~~n~dp~rg~~~~~~l~~i~~d~~~~~~l~~~g~~~~~V~~~Ge~v~L 654 (750)
T 3ln6_A 578 LEG---DCIAVLLRVAANVVGDGIHTISQLVKLKNQNPLRGYDHRSPLEVIELGEVEQLMLEQQGYTVNSIPPEGTKIEL 654 (750)
T ss_dssp ETT---EEEEEEEEECCEEECCTTCCHHHHHHHHTTCTTEESSSCCSEECCCCCHHHHHHHHHTTCCSSCCCCTTCEEES
T ss_pred ECC---EEEEEEEEecceEecCCccCHHHHHHhhccCccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEEE
Confidence 854 566554442211 0 00 00 00000
Q ss_pred ccC---------CCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEEcC--------CCcEEEEeeCCCCCCc-hhHHHHH
Q psy15244 298 APA---------QDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLLDK--------DDNFYFIEVNPRLQVE-HTLSEEI 359 (1427)
Q Consensus 298 aPa---------~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflvd~--------dG~~yfIEINpRl~ge-~~vte~~ 359 (1427)
... ...++++.+++.+.|.++++++|+. .+.||++.++ .|.+++||+|++++-. |......
T Consensus 655 ~~~~Nls~Gg~~~d~td~i~p~~~~~a~~aa~~igl~-~~GvDli~~di~~~~~~~~~~~~iiEvN~~pg~~~h~~p~~g 733 (750)
T 3ln6_A 655 RRNSNISTGGDSIDVTNTMDPTYKQLAAEMAEAMGAW-VCGVDLIIPNATQAYSKDKKNATCIELNFNPLMYMHTYCQEG 733 (750)
T ss_dssp CSSCCTTTTCEEEECTTTSCHHHHHHHHHHHHHHTCS-SCEEEEEESCSSSCCCTTTTCCEEEEEESSCCCHHHHSCSBS
T ss_pred eecccccCCCceeeccccCCHHHHHHHHHHHHHhCCC-eEEEEEEecCccccccccCCCeEEEEEcCCcchhhhcCcccC
Confidence 000 0124455678899999999999987 7889999874 4568999999999865 4443456
Q ss_pred hCCCHHHHHHHHHc
Q psy15244 360 TGIDVVQSQIKIAQ 373 (1427)
Q Consensus 360 tGiDLv~~~i~iA~ 373 (1427)
+|.|+.+..+....
T Consensus 734 ~~~~v~~~ii~~lf 747 (750)
T 3ln6_A 734 PGQSITPRILAKLF 747 (750)
T ss_dssp CCCCCHHHHHHHHC
T ss_pred CCCcHHHHHHHHhC
Confidence 89999988887653
No 82
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=99.70 E-value=2e-15 Score=201.82 Aligned_cols=172 Identities=24% Similarity=0.279 Sum_probs=129.8
Q ss_pred cccccChhhHHHHHhHhhhcCCCCCCCchhcccccccccccCCccccccccCccchhhhhcCchhHHHHHHHhhccCCCC
Q psy15244 1125 MNKLIFPKATKKFMKFRDEFGPVDKLPTRIFFHALERKAEFDPIMACDCRENEPVKMNELIFPKATKKFMKFRDEFGPVD 1204 (1427)
Q Consensus 1125 ~~~~~~p~~~~~~~~~~~~~g~~~~l~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1204 (1427)
+..+|||++..+|.+.+++||++++|||+.||.||+.||++. +..++
T Consensus 993 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------------------------- 1039 (1165)
T 2qf7_A 993 ASYLMYPKVFTDFALASDTYGPVSVLPTPAYFYGLADGEELF-ADIEK-------------------------------- 1039 (1165)
T ss_dssp HHHHHCHHHHHHHHHHHHHHCCGGGSCHHHHHHCCCTTCEEE-EEEET--------------------------------
T ss_pred HHHHcCcHHHHHHHHHHHhcCCcccCCchhhhcCCCcCceee-ecccC--------------------------------
Confidence 778899999999999999999999999999999999999985 44444
Q ss_pred CCCcccccCCCCCCcEEEEEeeCCcEEEeeecccccccccCcceeEEEEeccceeeeeeccccccccCCCchhhhhcccc
Q psy15244 1205 KLPTRIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGLHTTNTYNLQQILKTSPSDVFAFLRLKS 1284 (1427)
Q Consensus 1205 ~l~~~~f~~g~~~g~~~~v~~~~Gk~~~i~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~s 1284 (1427)
|+++.+.+ ..+. ..+..+.|++||++||+.+.+.+++...-. . .....++....
T Consensus 1040 -------------gk~~~~~~-----~~~~------~~~~~g~~~~~~evnG~~~~v~v~~~~~~~-~-~~~~~~~a~~~ 1093 (1165)
T 2qf7_A 1040 -------------GKTLVIVN-----QAVS------ATDSQGMVTVFFELNGQPRRIKVPDRAHGA-T-GAAVRRKAEPG 1093 (1165)
T ss_dssp -------------TEEEEEEE-----EEEC------CCCTTSEEEEEEEETTEEEEEEEECGGGTC-C-SCCCSCBCCTT
T ss_pred -------------CccceeEe-----cccC------CCccCCceEEEEEECCEEEEEEecCccccc-c-cccccccCCCC
Confidence 88888855 2333 244578999999999999999999874321 0 11112333334
Q ss_pred cceeccCCCCCcceeeeeecCCcceEEEeecccccccCCceEEEEEECCEEeEechhhhhhhhccccCCCCCCCceecCC
Q psy15244 1285 ERIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGQLRSLDKNKAKKLKLRSKADSDTAGEIGAPM 1364 (1427)
Q Consensus 1285 ~~v~v~~~~~g~~~~~~v~~Gd~~~~~~~~i~~~~~~~g~r~v~~elnG~~~~vd~~~~~~~~~~~~a~~~~~~~V~APm 1364 (1427)
....|.++|.|...+|.++.|+.+ .. |..-+.+|- ......|.||.
T Consensus 1094 ~~~~v~ap~~G~v~~~~v~~Gd~V-----------~~-G~~l~~iEa----------------------mKme~~i~Ap~ 1139 (1165)
T 2qf7_A 1094 NAAHVGAPMPGVISRVFVSSGQAV-----------NA-GDVLVSIEA----------------------MKMETAIHAEK 1139 (1165)
T ss_dssp CTTEEECSSCEEEEEECCSSCCCC---------------CEEEEEEC-------------------------CEEEECCS
T ss_pred CCceeeCCCCeEEEEEEcCCcCEe-----------CC-CCEEEEEEc----------------------ccceEEEEcCC
Confidence 456799999999999999999987 22 322222220 01246899999
Q ss_pred CeEEEEEEecCCCEEecCCEEEEEE
Q psy15244 1365 PGNIIEVKVKVGQQVKKNDVLIVMS 1389 (1427)
Q Consensus 1365 ~G~v~~v~V~~Gd~V~~G~~l~~ie 1389 (1427)
.|+|.++.|++||.|..||+|++|+
T Consensus 1140 ~G~V~~i~v~~G~~V~~g~~l~~i~ 1164 (1165)
T 2qf7_A 1140 DGTIAEVLVKAGDQIDAKDLLAVYG 1164 (1165)
T ss_dssp SCCCCEECCCSSCEECTTBEEEEC-
T ss_pred CEEEEEEEeCCCCEECCCCEEEEec
Confidence 9999999999999999999999886
No 83
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=99.61 E-value=2e-14 Score=165.80 Aligned_cols=218 Identities=17% Similarity=0.120 Sum_probs=156.1
Q ss_pred CCCEEEeCCCccc--cc---HHHHHHHHHCCCceeCCCHHHHHHhCCH----HHHHHHHHhCCC---CCCCCccccCCCH
Q psy15244 130 NVDAIHPGYGFLS--ER---EDFAKAVIGAGLEFIGPAPNVLKTLGDK----VLARDAALKADV---PIIPGTTEPVTDV 197 (1427)
Q Consensus 130 ~vDaI~pg~gfls--E~---~~~a~~~e~~Gi~fiGps~eai~~~~DK----~~~r~~a~~aGV---pvp~~~~~~v~s~ 197 (1427)
..|+|++-.+... ++ -.+.+.++..|++.+ ++++++..++|| ..+-+++.++|+ |.|+.+. ..+.
T Consensus 68 ~~D~vi~R~~~~~~~~~~~~r~vl~~le~~Gvpvi-N~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~~~--~~~~ 144 (309)
T 1i7n_A 68 RPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSI-NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTY--YPNH 144 (309)
T ss_dssp CCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEE--ESSG
T ss_pred cCCEEEEecccccccccchHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCCEEe--eCCh
Confidence 4789998755332 22 345667999999987 899999999999 566777888888 8666542 3343
Q ss_pred HHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccE
Q psy15244 198 DKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDV 277 (1427)
Q Consensus 198 eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~v 277 (1427)
.+ .++..|||+|+||..|+.|+||.++++.+++++.++..... +..+++||||+.++.+.+.++++. +
T Consensus 145 ~~---~~~~~g~PvVvK~~~Gs~G~GV~lv~~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VvGg~---v 212 (309)
T 1i7n_A 145 RE---MLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALT------QTYATAEPFIDAKYDIRVQKIGNN---Y 212 (309)
T ss_dssp GG---GSSCCCSSEEEEESSCSTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETTE---E
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeecCCCceEEEEEECCE---E
Confidence 33 45678999999999999999999999999998887654322 367889999998899999998764 5
Q ss_pred EEeeeec--cccccccceEEEEccCCCCCHHHHHHHHHHHHHHHHHc-CCCCeEEEEEEEcCCCcEEEEeeCC--CCCCc
Q psy15244 278 VHLYERD--CSMQRRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSL-GYSNAGTVEFLLDKDDNFYFIEVNP--RLQVE 352 (1427)
Q Consensus 278 v~l~erd--~s~qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~al-g~~G~~~VEflvd~dG~~yfIEINp--Rl~ge 352 (1427)
+....|. -..+.+ .......|. .+++ ++.+.|.++++++ |+ +.+.||++.+++|.+|++|+|. -++-+
T Consensus 213 ~a~~Rr~~~g~wrtN-~~~~~~e~~-~l~~----e~~~la~~A~~a~gGl-di~GVDll~~~~g~~~V~EVN~~~~P~~~ 285 (309)
T 1i7n_A 213 KAYMRTSISGNWKTN-TGSAMLEQI-AMSD----RYKLWVDACSEMFGGL-DICAVKAVHGKDGKDYIFEVMDCSMPLIG 285 (309)
T ss_dssp EEEEEESSCTTTSCS-CCCSSEEEE-CCCH----HHHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCCCCS
T ss_pred EEEEEEcCCCCCeec-CCcceeeec-CCCH----HHHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEECCCCCCCcc
Confidence 5544431 112221 111111122 2444 4778889999999 56 6889999999999899999999 66643
Q ss_pred hhHHHHHhCCCHHHHHHHH
Q psy15244 353 HTLSEEITGIDVVQSQIKI 371 (1427)
Q Consensus 353 ~~vte~~tGiDLv~~~i~i 371 (1427)
-++..++.++.+..+..
T Consensus 286 --~~~~~~~~~ia~~ii~~ 302 (309)
T 1i7n_A 286 --EHQVEDRQLITDLVISK 302 (309)
T ss_dssp --SCHHHHHHHHHHHHHHH
T ss_pred --chhhhhHHHHHHHHHHH
Confidence 23335677777777654
No 84
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=99.59 E-value=3.1e-14 Score=168.66 Aligned_cols=219 Identities=16% Similarity=0.134 Sum_probs=158.2
Q ss_pred CCCEEEeCCCccc--c---cHHHHHHHHHCCCceeCCCHHHHHHhCCH----HHHHHHHHhCCC---CCCCCccccCCCH
Q psy15244 130 NVDAIHPGYGFLS--E---REDFAKAVIGAGLEFIGPAPNVLKTLGDK----VLARDAALKADV---PIIPGTTEPVTDV 197 (1427)
Q Consensus 130 ~vDaI~pg~gfls--E---~~~~a~~~e~~Gi~fiGps~eai~~~~DK----~~~r~~a~~aGV---pvp~~~~~~v~s~ 197 (1427)
..|+|++-.+... + .-.+.+.++..|++++ ++++++..|+|| ..+-+++.++|+ |.++.+. ..+.
T Consensus 180 ~~DaviiR~~~~~~~~~~~yr~vlr~lE~~Gvpvi-Ns~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~t~--~~~~ 256 (422)
T 1pk8_A 180 KPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSV-NSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTF--YPNH 256 (422)
T ss_dssp CCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEE--ESSG
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCceEe--cCch
Confidence 5799998755332 2 1245677999999987 899999999999 556677788888 7555441 2333
Q ss_pred HHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccE
Q psy15244 198 DKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDV 277 (1427)
Q Consensus 198 eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~v 277 (1427)
.+ +++..|||+||||..|+.|+||.++++.++++..++..... +..+++||||+.++.+.|.++++. +
T Consensus 257 ~~---~i~~~g~PvVvKp~~GS~G~GV~lve~~~~l~~ii~~~~~~------~~~~~vQEfI~~g~DIRv~VVGg~---v 324 (422)
T 1pk8_A 257 KE---MLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALT------KTYATAEPFIDAKYDVRVQKIGQN---Y 324 (422)
T ss_dssp GG---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TSCEEEEECCCEEEEEEEEEETTE---E
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEeCCHHHHHHHHHHHhcc------CceEEEEeecCCCceEEEEEECCE---E
Confidence 33 34678999999999999999999999999999888654332 367889999998899999999764 5
Q ss_pred EEeeeec--cccccccceEEEEccCCCCCHHHHHHHHHHHHHHHHHc-CCCCeEEEEEEEcCCCcEEEEeeCC--CCCCc
Q psy15244 278 VHLYERD--CSMQRRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSL-GYSNAGTVEFLLDKDDNFYFIEVNP--RLQVE 352 (1427)
Q Consensus 278 v~l~erd--~s~qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~al-g~~G~~~VEflvd~dG~~yfIEINp--Rl~ge 352 (1427)
+....|. -..+.+. ......+. .+++ ++.+.|.++++++ |+ +.+.||++.+++|.+|++|||. .++-+
T Consensus 325 va~~Rr~~~g~WrtNv-g~g~~e~i-~lt~----e~~elA~kAaka~gGl-diaGVDlL~s~dG~~~VlEVN~s~~P~~~ 397 (422)
T 1pk8_A 325 KAYMRTSVSGNWKTNT-GSAMLEQI-AMSD----RYKLWVDTCSEIFGGL-DICAVEALHGKDGRDHIIEVVGSSMPLIG 397 (422)
T ss_dssp EEEEEEESSSCSSTTS-SCEEEEEE-CCCH----HHHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCCCCT
T ss_pred EEEEEEcCCCCceecc-Cceeeeee-CCCH----HHHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEECCCCCCCcc
Confidence 5543331 1122221 11222222 2454 5778899999999 56 5889999999999899999999 66533
Q ss_pred hhHHHHHhCCCHHHHHHHHH
Q psy15244 353 HTLSEEITGIDVVQSQIKIA 372 (1427)
Q Consensus 353 ~~vte~~tGiDLv~~~i~iA 372 (1427)
-++..++.|+.+..+...
T Consensus 398 --g~~~~~~~~IA~~ii~~i 415 (422)
T 1pk8_A 398 --DHQDEDKQLIVELVVNKM 415 (422)
T ss_dssp --TCHHHHHHHHHHHHHHHH
T ss_pred --chhhhHHHHHHHHHHHHH
Confidence 334457888888887754
No 85
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=99.58 E-value=5.7e-14 Score=163.90 Aligned_cols=220 Identities=15% Similarity=0.103 Sum_probs=159.9
Q ss_pred CCCEEEeCCCccc--c---cHHHHHHHHHCCCceeCCCHHHHHHhCCH----HHHHHHHHhCCC---CCCCCccccCCCH
Q psy15244 130 NVDAIHPGYGFLS--E---REDFAKAVIGAGLEFIGPAPNVLKTLGDK----VLARDAALKADV---PIIPGTTEPVTDV 197 (1427)
Q Consensus 130 ~vDaI~pg~gfls--E---~~~~a~~~e~~Gi~fiGps~eai~~~~DK----~~~r~~a~~aGV---pvp~~~~~~v~s~ 197 (1427)
..|+|++-.+... + .-.+.+.++..|++.+ ++++++..++|| ..+-+++.++|+ |.++.+. ..+.
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~Gvpvi-N~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~t~--~~~~ 161 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAV-NSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTF--FPNH 161 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEE-SCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCCEE--ESSS
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCceec-CCHHHHHhhCCchHHHHHHHHHHHHCCCCCCCCCCEEe--cCch
Confidence 6899999866422 2 1245667899999987 899999999999 667777788888 8666431 2333
Q ss_pred HHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCCceEEEEEEecccccE
Q psy15244 198 DKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRPRHIEVQILGDKYGDV 277 (1427)
Q Consensus 198 eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIeggreieVqvl~Dg~G~v 277 (1427)
.+ ..+..|||+|+||..|+.|+||.++++.+++++.++..... +..+++||||+.++.+.|.++++. +
T Consensus 162 ~~---~~~~~g~PvVvK~~~Gs~G~GV~lve~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VVGg~---v 229 (344)
T 2p0a_A 162 KP---MVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMA------KTYATTEAFIDSKYDIRIQKIGSN---Y 229 (344)
T ss_dssp TT---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETTE---E
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeccCCCccEEEEEECCE---E
Confidence 22 35578999999999999999999999999998877644321 467889999998899999998764 5
Q ss_pred EEeeeec--cccccccceEEEEccCCCCCHHHHHHHHHHHHHHHHHc-CCCCeEEEEEEEcCCCcEEEEeeCC--CCCCc
Q psy15244 278 VHLYERD--CSMQRRYQKVIQIAPAQDMSVSVRDAITETSVRLAKSL-GYSNAGTVEFLLDKDDNFYFIEVNP--RLQVE 352 (1427)
Q Consensus 278 v~l~erd--~s~qr~~qk~ie~aPa~~l~~e~~~~l~~~a~~l~~al-g~~G~~~VEflvd~dG~~yfIEINp--Rl~ge 352 (1427)
+....|. -..+.+.. .....+. .+++ ++.+.|.++++++ |+ +.+.||++.+++|.+|++|+|. .+.-+
T Consensus 230 va~~R~~~~g~wrtN~~-~~~~e~~-~l~~----e~~~la~~Aa~a~gGl-di~GVDll~~~~G~~~VlEVN~~~~P~~~ 302 (344)
T 2p0a_A 230 KAYMRTSISGNWKANTG-SAMLEQV-AMTE----RYRLWVDSCSEMFGGL-DICAVKAVHSKDGRDYIIEVMDSSMPLIG 302 (344)
T ss_dssp EEEEEEESSSCSSTTSS-SEEEEEE-CCCH----HHHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCCCCG
T ss_pred EEEEEecCCCCCeecCC-ceEEEee-CCCH----HHHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEEcCCCCCccc
Confidence 5443321 11222211 1221222 2444 4778888999999 56 6889999999999899999999 65532
Q ss_pred hhHHHHHhCCCHHHHHHHHHc
Q psy15244 353 HTLSEEITGIDVVQSQIKIAQ 373 (1427)
Q Consensus 353 ~~vte~~tGiDLv~~~i~iA~ 373 (1427)
-++..++.|+.+..++...
T Consensus 303 --~~~~~~~~~Ia~~ii~~i~ 321 (344)
T 2p0a_A 303 --EHVEEDRQLMADLVVSKMS 321 (344)
T ss_dssp --GGHHHHHHHHHHHHHHHHH
T ss_pred --chhhhHHHHHHHHHHHHHH
Confidence 4455688899999888663
No 86
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.5e-15 Score=147.97 Aligned_cols=105 Identities=39% Similarity=0.697 Sum_probs=92.1
Q ss_pred HHhCCHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHH
Q psy15244 167 KTLGDKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALA 246 (1427)
Q Consensus 167 ~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~ 246 (1427)
..+.||..++++++++|||+|++....+.+.+++.++++++|||+|+||..|+||+|++++++.+|+.++++.+......
T Consensus 4 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~~~~~~gv~~v~~~~el~~~~~~~~~~~~~ 83 (108)
T 2cqy_A 4 GSSGDKIESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAAS 83 (108)
T ss_dssp CCCCCCCCSTTCCCSSCCCCCSCCCSCBSSHHHHHHHHHHHCSSEEEEETTSCCTTTCEEESSHHHHHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHhcCCCEEEEECCCCCCccEEEeCCHHHHHHHHHHHHHHHHh
Confidence 46789999999999999999998522578999999999999999999999999999999999999999999988766555
Q ss_pred ccCCCcEEEEeeccCCceEEEEEEe
Q psy15244 247 SFGKDDMLVEKYIDRPRHIEVQILG 271 (1427)
Q Consensus 247 ~fg~~~vlVEeyIeggreieVqvl~ 271 (1427)
.+++..++||+||++++|++|++++
T Consensus 84 ~~~~~~~lvee~i~g~~E~~v~v~g 108 (108)
T 2cqy_A 84 SFGDDRLLIEKFIDNPRHISGPSSG 108 (108)
T ss_dssp HTSSCCEEEEECCSSSSCCCSCCCC
T ss_pred hcCCCcEEEeeccCCCcEEEEEecC
Confidence 5666899999999977799988753
No 87
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=99.54 E-value=4e-14 Score=166.77 Aligned_cols=231 Identities=16% Similarity=0.207 Sum_probs=154.2
Q ss_pred CCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEeCCCc-ccc
Q psy15244 65 RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHPGYGF-LSE 143 (1427)
Q Consensus 65 rGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~pg~gf-lsE 143 (1427)
+..+..+++++|+++|++++.++..... . .....|+|++..+. ..|
T Consensus 31 ~~~~~~~l~~al~~~G~~~~~iD~~~~~--~-------------------------------~~~~~Dvvi~~l~~~~~e 77 (346)
T 2q7d_A 31 KKLNFQAFAELCRKRGMEVVQLNLSRPI--E-------------------------------EQGPLDVIIHKLTDVILE 77 (346)
T ss_dssp HHHTHHHHHHHHHTTTCEEEECCTTSCS--G-------------------------------GGCCCSEEEECCHHHHHH
T ss_pred hhhhHHHHHHHHHhCCcEEEEcccccch--h-------------------------------hcCCCCEEEeCCcccccc
Confidence 4445678999999999999877543210 0 00247777776432 111
Q ss_pred --------cHH---HHHHHH-HCCCceeCCCHHHHHHhCCHHHHHHHHHhC-------CCCCCCCccccCCC--HHHHHH
Q psy15244 144 --------RED---FAKAVI-GAGLEFIGPAPNVLKTLGDKVLARDAALKA-------DVPIIPGTTEPVTD--VDKVKE 202 (1427)
Q Consensus 144 --------~~~---~a~~~e-~~Gi~fiGps~eai~~~~DK~~~r~~a~~a-------GVpvp~~~~~~v~s--~eea~~ 202 (1427)
... +.+... ..|++++ +++.++..+.||..+.+++.++ |||+|++. .+.+ .+++.+
T Consensus 78 a~~~d~~~~~~~~~l~~~~~~~~gv~vi-np~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t~--~~~~~~~~~~~~ 154 (346)
T 2q7d_A 78 ADQNDSQSLELVHRFQEYIDAHPETIVL-DPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPFM--ELTSLCGDDTMR 154 (346)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHCTTSEEE-SCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCEE--EECSCCCTTHHH
T ss_pred cccCchhHHHHHHHHHHHHHHCCCeEEc-CCHHHHHHhhhHHHHHHHHHhhcccccCCCCCCCCEE--EEeCCCHHHHHH
Confidence 111 222211 2478766 8999999999999999999997 99999986 3443 244544
Q ss_pred HHH--hcCCcEEEeecCCCC--CcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeecc-CCceEEEEEEecccccE
Q psy15244 203 FCD--EVEFPVILKAAFGGG--GRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYID-RPRHIEVQILGDKYGDV 277 (1427)
Q Consensus 203 ~a~--~iGyPvVVKP~~GgG--GrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIe-ggreieVqvl~Dg~G~v 277 (1427)
.++ .+|||+|+||..|.| |.||.++.+.++|... +.+++|||||+ +|+++.|.++++ .+
T Consensus 155 ~~~~~~lg~P~VvKP~~g~Gs~s~~v~~v~~~~~l~~~-------------~~~~lvQefI~~~G~dirv~VvG~---~v 218 (346)
T 2q7d_A 155 LLEKNGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNAI-------------QPPCVVQNFINHNAVLYKVFVVGE---SY 218 (346)
T ss_dssp HHHHTTCCSSEEEECSBCSSTTCCEEEEECSGGGTTC---------------CCEEEEECCCCTTEEEEEEEETT---EE
T ss_pred HHHhcCCCCCEEEEecCCCcceeeeeEEecCHHHHHhc-------------CCCEEEEEeeCCCCeEEEEEEECC---EE
Confidence 443 578999999997644 6799999999988742 36799999998 478999999865 34
Q ss_pred EEeeeeccc---c------------cccc--ceEEEEcc------CCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEEE
Q psy15244 278 VHLYERDCS---M------------QRRY--QKVIQIAP------AQDMSVSVRDAITETSVRLAKSLGYSNAGTVEFLL 334 (1427)
Q Consensus 278 v~l~erd~s---~------------qr~~--qk~ie~aP------a~~l~~e~~~~l~~~a~~l~~alg~~G~~~VEflv 334 (1427)
+....+... . ++.+ .......| ...+++ .+++.+.|.++.++||+..+ .||+++
T Consensus 219 ~~~~r~sl~~~~~~~~~~~~~~f~s~~~~~~g~~~~~~~~~~~~~~~~~~~--~~el~~lA~~a~~alGl~~~-gvDii~ 295 (346)
T 2q7d_A 219 TVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFERPS--DEVIRELSRALRQALGVSLF-GIDIII 295 (346)
T ss_dssp EEEEEECCCCCC----CCCCEEEEGGGTSSTTCCCGGGCCSCCCSCCCCCC--HHHHHHHHHHHHHHHCCCEE-EEEEEE
T ss_pred EEEEEecCCCcCcCccccccccccceeeccCCccccccccccccccccCCC--hHHHHHHHHHHHHHhCCceE-eeEEEe
Confidence 443222100 0 0000 00000111 011232 47899999999999999966 599999
Q ss_pred cC-CCcEEEEeeCCCCC
Q psy15244 335 DK-DDNFYFIEVNPRLQ 350 (1427)
Q Consensus 335 d~-dG~~yfIEINpRl~ 350 (1427)
+. +|++|+||||+=++
T Consensus 296 ~~~~g~~~VlEVN~~PG 312 (346)
T 2q7d_A 296 NNQTGQHAVIDINAFPG 312 (346)
T ss_dssp CTTTCCEEEEEEEESCC
T ss_pred ecCCCCEEEEEEeCCcc
Confidence 86 68899999999554
No 88
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=99.47 E-value=3.3e-13 Score=172.12 Aligned_cols=101 Identities=28% Similarity=0.437 Sum_probs=82.3
Q ss_pred EEEEEECCEEeEe---chhhhh-hhhccccCCCCCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCC
Q psy15244 1326 TVFFLYNGQLRSL---DKNKAK-KLKLRSKADSDTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASA 1401 (1427)
Q Consensus 1326 ~v~~elnG~~~~v---d~~~~~-~~~~~~~a~~~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~ 1401 (1427)
.+.+.++|..+.+ +..... ......++...+++.|.|||||+|++|+|++||+|++||+|++|||||||++|+||.
T Consensus 577 ~~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamKm~~~i~ap~ 656 (681)
T 3n6r_A 577 GFRIRTRGADLKVHVRTPRQAELARLMPEKLPPDTSKMLLCPMPGLIVKVDVEVGQEVQEGQALCTIEAMKMENILRAEK 656 (681)
T ss_dssp EEEEECSSCCEEEEEECHHHHHHHTTSCCCCCCCCCSEEECCSCEEEEEECCCTTCEECTTCEEEEEECSSCEEEEECSS
T ss_pred EEEEEECCeEEEEEecCchhhhhccccccccCCCCCCeEECCCcEEEEEEEeCCCCEEcCCCEEEEEEecCceeEEECCC
Confidence 3555566766655 221111 112223345567889999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1402 DGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1402 ~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
+|+|+++.+++|+.|+.|++|++|+
T Consensus 657 ~G~v~~i~~~~G~~v~~g~~l~~i~ 681 (681)
T 3n6r_A 657 KGVVAKINASAGNSLAVDDVIMEFE 681 (681)
T ss_dssp SEEEEEECCCTTCEECTTCEEEEEC
T ss_pred CeEEEEEEeCCcCEeCCCCEEEEEC
Confidence 9999999999999999999999985
No 89
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=99.41 E-value=1.8e-13 Score=128.12 Aligned_cols=71 Identities=23% Similarity=0.309 Sum_probs=68.1
Q ss_pred CCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1355 DTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1355 ~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
.++..|.||++|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++. ++|+.|..|++|+.|+
T Consensus 3 ~~~~~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~-~~G~~V~~G~~l~~i~ 73 (84)
T 2kcc_A 3 NDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKYIK-RPGAVLEAGCVVARLE 73 (84)
T ss_dssp CCTTEECCSSSCCEEEESSCTTEEECTTCEEEEEECSSCEEEEECSSSEEEEECS-CTTCCCCTTCCCEEEE
T ss_pred CCCceEECCCCEEEEEEECCCCCEECCCCEEEEEEecceeEEEECCCCEEEEEEc-CCCCEECCCCEEEEEe
Confidence 3567899999999999999999999999999999999999999999999999999 9999999999999886
No 90
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=1.4e-12 Score=126.19 Aligned_cols=74 Identities=20% Similarity=0.302 Sum_probs=69.6
Q ss_pred CCCCCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1352 ADSDTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1352 a~~~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
....++..|.||++|+|.+|+|++||.|++||+|+++|+|||+++|+||.+|+|. +.+++|+.|..|++|++|+
T Consensus 12 ~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le~~k~~~~i~Ap~~G~V~-~~v~~G~~V~~G~~l~~i~ 85 (100)
T 2dn8_A 12 EKENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVK-YIKRPGAVLEAGCVVARLE 85 (100)
T ss_dssp CCCCCTTEEECSSCEEEEEESSCTTEEECTTCEEEEEEETTEEEEEECSSSEEEE-ECSCTTCEECSSCEEEEEC
T ss_pred EcCCCCcEEeCCCCEEEEEEEcCCcCEECCCCEEEEEEecceEEEEEcCCCEEEE-EEeCCCCEECCCCEEEEEE
Confidence 3445677899999999999999999999999999999999999999999999999 9999999999999999885
No 91
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.35 E-value=8.9e-13 Score=122.11 Aligned_cols=70 Identities=33% Similarity=0.513 Sum_probs=67.2
Q ss_pred CCceecCCCeEEEEE-------EecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1357 AGEIGAPMPGNIIEV-------KVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v-------~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
...|.||++|+|.++ +|++||.|++||+|+.||+|||+++|+||.+|+|.++++++|+.|..|++|+.|+
T Consensus 4 ~~~v~a~~~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 4 GHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp SEEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred CeEEEcCCCeEEEEecccCcccccCCcCEECCCCEEEEEEeccEEEEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 457999999999997 9999999999999999999999999999999999999999999999999999885
No 92
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=99.35 E-value=2.3e-13 Score=173.39 Aligned_cols=74 Identities=36% Similarity=0.559 Sum_probs=0.0
Q ss_pred CCCCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1353 DSDTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1353 ~~~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
.....+.|.|||||+|++|+|++||.|++||+|++||+||||++|+||.+|+|+++.+++|+.|+.|++|++|+
T Consensus 598 ~~~~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~ 671 (675)
T 3u9t_A 598 AHAHQGGLSAPMNGSIVRVLVEPGQTVEAGATLVVLEAMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELD 671 (675)
T ss_dssp --------------------------------------------------------------------------
T ss_pred ccCCCCeEECCCCEEEEEEEeCCCCEEcCCCEEEEEEecceeEEEECCCCeEEEEEEeCCcCCcCCCCEEEEEe
Confidence 34457889999999999999999999999999999999999999999999999999999999999999999886
No 93
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=99.34 E-value=2.2e-12 Score=116.80 Aligned_cols=68 Identities=32% Similarity=0.517 Sum_probs=65.8
Q ss_pred ceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1359 EIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1359 ~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
+|.||++|+|.+|+|++||.|++||+|+.||+|||+.+|+||.+|+|.++.+++|+.|..|++|+.|.
T Consensus 1 ~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~v~~G~~V~~G~~l~~i~ 68 (72)
T 1z6h_A 1 TVSIQMAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEGDFVNEGDVLLELS 68 (72)
T ss_dssp CEECCSSEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEESSCTTCEECTTCEEEEEG
T ss_pred CEECcccEEEEEEEcCCcCEECCCCEEEEEECCccEEEEECCCCcEEEEEecCCCCEECCCCEEEEEe
Confidence 47899999999999999999999999999999999999999999999999999999999999999874
No 94
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=99.33 E-value=7.7e-13 Score=157.84 Aligned_cols=169 Identities=17% Similarity=0.229 Sum_probs=123.4
Q ss_pred CHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCC-cEEEeec--CCCCCcC---------eEEecCHHHHHHHHH
Q psy15244 171 DKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEF-PVILKAA--FGGGGRG---------MRMVANKDAIEENFK 238 (1427)
Q Consensus 171 DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGy-PvVVKP~--~GgGGrG---------V~iV~s~eeL~~a~~ 238 (1427)
+++.+|++++++|||+|++. .+.+.+++.++++++|| |+||||. .||.|+| |++++|++|+.++++
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~--~~~s~~ea~~~a~~lg~~PvVvK~~i~~GGrGKg~~ks~~~GGV~l~~s~~e~~~a~~ 81 (395)
T 2fp4_B 4 QEYQSKKLMSDNGVKVQRFF--VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAK 81 (395)
T ss_dssp CHHHHHHHHHHTTCCCCCEE--EESSHHHHHHHHHHHTCSSEEEEECCSSSCGGGCEETTSCBCSEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcCCCCeE--EECCHHHHHHHHHHcCCCcEEEEEeeccCCCccCccccCCcCCEEEECCHHHHHHHHH
Confidence 67899999999999999997 78999999999999999 8999995 5555554 999999999999988
Q ss_pred HHHHHH--HHcc---C--CCcEEEEeeccCCceEEEEEEecccc--cEEEee-eeccccccc----cceEEE--EccCCC
Q psy15244 239 RAQSEA--LASF---G--KDDMLVEKYIDRPRHIEVQILGDKYG--DVVHLY-ERDCSMQRR----YQKVIQ--IAPAQD 302 (1427)
Q Consensus 239 ~a~~ea--~~~f---g--~~~vlVEeyIeggreieVqvl~Dg~G--~vv~l~-erd~s~qr~----~qk~ie--~aPa~~ 302 (1427)
++.... ...+ | ...++||+|++.++|+.+.++.|... .++.++ +..+.+..- ..++.. +.|...
T Consensus 82 ~~l~~~~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~i~~D~~~~~pvi~~s~~GG~~iE~va~~~~d~i~~~~idp~~~ 161 (395)
T 2fp4_B 82 QMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEG 161 (395)
T ss_dssp TTTTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEETTTTEEEEEEESSCSSCHHHHHHHCGGGCEEEECCTTTC
T ss_pred HHhhcchhhhccCCCCCccceEEEEEccCCceeEEEEEEEccccCceEEEEECCCCccceeccccCCceEEEEecCCCCC
Confidence 765432 0111 2 35799999999899999999999763 455554 444544421 334443 335555
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCCeEEEE----------EEEcCCCcEEEEeeCCCCC
Q psy15244 303 MSVSVRDAITETSVRLAKSLGYSNAGTVE----------FLLDKDDNFYFIEVNPRLQ 350 (1427)
Q Consensus 303 l~~e~~~~l~~~a~~l~~alg~~G~~~VE----------flvd~dG~~yfIEINpRl~ 350 (1427)
+++ ..+.++++.+|+.+...-+ ++.+ . +++++||||++-
T Consensus 162 l~~-------~~a~~l~~~lg~~~~~~~~~~~~l~~l~~l~~~-~-d~~~lEINPl~~ 210 (395)
T 2fp4_B 162 IKD-------SQAQRMAENLGFLGPLQNQAADQIKKLYNLFLK-I-DATQVEVNPFGE 210 (395)
T ss_dssp CCH-------HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH-T-TEEEEEEEEEEE
T ss_pred CCH-------HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhhh-C-CeEEEEeeeEEE
Confidence 665 4577888888987542111 2223 2 599999999985
No 95
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=99.31 E-value=2.5e-12 Score=121.09 Aligned_cols=64 Identities=17% Similarity=0.279 Sum_probs=61.8
Q ss_pred CCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCC-eeCCCCEEEEEe
Q psy15244 1363 PMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGG-QVAQNDLVVVLD 1426 (1427)
Q Consensus 1363 Pm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~-~V~~g~~L~~i~ 1426 (1427)
+.+|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+ .|..|++|++|+
T Consensus 17 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~ 81 (87)
T 3crk_C 17 MTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIV 81 (87)
T ss_dssp CCEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCCEETTCEEEEEE
T ss_pred CCcEEEEEEEcCCCCEEcCCCEEEEEECCcccceeecCcCcEEEEEEECCCCeEECCCCEEEEEE
Confidence 4689999999999999999999999999999999999999999999999999 899999999886
No 96
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=99.31 E-value=4.7e-12 Score=116.22 Aligned_cols=75 Identities=32% Similarity=0.509 Sum_probs=71.1
Q ss_pred CCCCCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1352 ADSDTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1352 a~~~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
|.+.+...|.||++|.|.+|+|++||.|++||+|+.|++|||+.+|+||.+|+|.++.+++|+.|..|++|+.|+
T Consensus 3 ~~~~~~~~v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~~~~~~~~i~Ap~~G~v~~~~~~~G~~v~~G~~l~~i~ 77 (77)
T 1dcz_A 3 AGKAGEGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG 77 (77)
T ss_dssp SSCCCSSEEEBSSSCEEEEECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTTCBCCBTSEEEEEC
T ss_pred CCcCCCeEEECCCCEEEEEEEcCCcCEEcCCCEEEEEEccceeEEEECCCCEEEEEEecCCcCEECCCCEEEEEC
Confidence 445677889999999999999999999999999999999999999999999999999999999999999999885
No 97
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=99.29 E-value=1.9e-12 Score=154.31 Aligned_cols=170 Identities=18% Similarity=0.238 Sum_probs=122.3
Q ss_pred CHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCc-EEEeecCCCCCc----CeEEecCHHHHHHHHHHHHHHHH
Q psy15244 171 DKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFP-VILKAAFGGGGR----GMRMVANKDAIEENFKRAQSEAL 245 (1427)
Q Consensus 171 DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyP-vVVKP~~GgGGr----GV~iV~s~eeL~~a~~~a~~ea~ 245 (1427)
+++.+|++++++|||+|++. .+.+.+++.++++++||| +||||..+.||| ||+++++++|+.++++.+.....
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~--~~~s~eea~~aa~~lG~P~vVvK~~~~~ggrg~~gGV~l~~s~eel~~a~~~~~~~~~ 81 (388)
T 2nu8_B 4 HEYQAKQLFARYGLPAPVGY--ACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRL 81 (388)
T ss_dssp CHHHHHHHHHHTTCCCCCEE--EESSHHHHHHHHHHHCSSCEEEEECCSSSCTTTTTCEEEECSHHHHHHHHHHHTTSEE
T ss_pred CHHHHHHHHHHCCcCCCCee--EECCHHHHHHHHHHhCCCeEEEEEecCCCCCCccCCEEEECCHHHHHHHHHHHhhhhh
Confidence 78999999999999999997 789999999999999999 999999876655 99999999999999987653211
Q ss_pred -------HccCCCcEEEEeeccCCceEEEEEEeccc-c-cEEEee-ee--cccc-cccc-ceEEE--EccCCCCCHHHHH
Q psy15244 246 -------ASFGKDDMLVEKYIDRPRHIEVQILGDKY-G-DVVHLY-ER--DCSM-QRRY-QKVIQ--IAPAQDMSVSVRD 309 (1427)
Q Consensus 246 -------~~fg~~~vlVEeyIeggreieVqvl~Dg~-G-~vv~l~-er--d~s~-qr~~-qk~ie--~aPa~~l~~e~~~ 309 (1427)
.......++||+|++.++|+++.++.|.. | .++.+. +. ++.. ..++ .++.. ..|+..+++..
T Consensus 82 ~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~v~~D~~~g~pvi~~~~~GGv~iE~v~~~~pd~i~~~~i~P~~gl~~~~-- 159 (388)
T 2nu8_B 82 VTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQ-- 159 (388)
T ss_dssp CCTTSCTTCEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEESCTTSCHHHHHHHCGGGEEEEECBTTTBCCHHH--
T ss_pred hccccCCCCcccceEEEEEccccCCcEEEEEEEecccCCcEEEEeCCCCcchhhccccCCceEEEEecCCCCCCCHHH--
Confidence 00113579999999988999999999986 3 455443 21 2221 2212 33443 66766788754
Q ss_pred HHHHHHHHHHHHcCCCCeEE---E-------EEEEcCCCcEEEEeeCCCCCC
Q psy15244 310 AITETSVRLAKSLGYSNAGT---V-------EFLLDKDDNFYFIEVNPRLQV 351 (1427)
Q Consensus 310 ~l~~~a~~l~~alg~~G~~~---V-------Eflvd~dG~~yfIEINpRl~g 351 (1427)
+.++++.+|+.+... . +++.+. +++++||||++-.
T Consensus 160 -----a~~~~~~lG~~~~~~~~~~~~l~~l~~~~~~~--d~~~lEINPl~~~ 204 (388)
T 2nu8_B 160 -----GRELAFKLGLEGKLVQQFTKIFMGLATIFLER--DLALIEINPLVIT 204 (388)
T ss_dssp -----HHHHHHHTTCCTHHHHHHHHHHHHHHHHHHHT--TEEEEEEEEEEEE
T ss_pred -----HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhC--CEEEEEecceEEc
Confidence 445555667765210 1 122232 5999999998863
No 98
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=99.28 E-value=4.5e-12 Score=120.90 Aligned_cols=64 Identities=20% Similarity=0.239 Sum_probs=62.0
Q ss_pred CCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1363 PMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1363 Pm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
..+|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++.+++|+.|..|++|++|+
T Consensus 16 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K~~~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~ 79 (93)
T 1k8m_A 16 IREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIE 79 (93)
T ss_dssp SCCEEEEEECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSSCEECTTSEEEEEE
T ss_pred CCCEEEEEEEcCCcCEECCCCEEEEEEcCCcEEEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEe
Confidence 4689999999999999999999999999999999999999999999999999999999999986
No 99
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=99.28 E-value=3.5e-12 Score=117.86 Aligned_cols=65 Identities=26% Similarity=0.383 Sum_probs=62.8
Q ss_pred cCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1362 APMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1362 APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
++++|+|.+|+|++||.|++||+|+++|+|||+++|+||.+|+|.++++++|+.|..|++|++|+
T Consensus 12 ~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (79)
T 1ghj_A 12 SIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEGDTVLSGELLGKLT 76 (79)
T ss_dssp SCSCEEECCCSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTTCEECTTCEEEEEC
T ss_pred CCCCEEEEEEEcCCCCEECCCCEEEEEEccceeEEEEcCCCEEEEEEEcCCcCEECCCCEEEEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999885
No 100
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=99.27 E-value=1e-11 Score=112.93 Aligned_cols=71 Identities=37% Similarity=0.619 Sum_probs=67.6
Q ss_pred CCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1356 TAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1356 ~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
+...|.||++|+|.+|+|++||.|++||+|+.+++|||+.+|+||.+|+|.++.+++|+.|..|++|+.|+
T Consensus 4 ~~~~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 74 (74)
T 2d5d_A 4 SENVVSAPMPGKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEGEAVDTGQPLIELG 74 (74)
T ss_dssp -CCEEECSSCEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred CCeEEecCCCEEEEEEEcCCCCEeCCCCEEEEEecccceEEEeCCCCEEEEEEEcCCcCEECCCCEEEEEC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999875
No 101
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=99.25 E-value=5.6e-12 Score=115.84 Aligned_cols=65 Identities=23% Similarity=0.328 Sum_probs=63.2
Q ss_pred cCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1362 APMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1362 APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
+|++|+|.+|+|++||.|++||+|+.+|+|||+.+|+||.+|+|.++++++|+.|..|++|+.|+
T Consensus 12 ~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 12 GVTEGEIVRWDVKEGDMVEKDQDLVEVMTDKVTVKIPSPVRGKIVKILYREGQVVPVGSTLLQID 76 (77)
T ss_dssp SCCCEEEEECSCCTTCEECSCCCCCEEESSSCEEECCCCCCEEEEEECCCTTCEECSCSEEEEEE
T ss_pred CCccEEEEEEEeCCCCEECCCCEEEEEEccceEEEEECCCCEEEEEEEeCCcCEECCCCEEEEEE
Confidence 47899999999999999999999999999999999999999999999999999999999999986
No 102
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=6.2e-12 Score=121.03 Aligned_cols=63 Identities=29% Similarity=0.388 Sum_probs=61.2
Q ss_pred CCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCee-CCCCEEEEEe
Q psy15244 1364 MPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQV-AQNDLVVVLD 1426 (1427)
Q Consensus 1364 m~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V-~~g~~L~~i~ 1426 (1427)
.+|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.| ..|++|++|+
T Consensus 20 ~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K~~~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i~ 83 (98)
T 2dnc_A 20 EEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIV 83 (98)
T ss_dssp SEECEEEESSCTTCEECTTSEEEEEECSSCEEEEECSSCEEEEECSSCTTCCCEESSCEEEEEE
T ss_pred ccEEEEEEEcCCCCEeCCCCEEEEEEcccceeEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEEe
Confidence 57999999999999999999999999999999999999999999999999999 9999999986
No 103
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=99.24 E-value=1.6e-12 Score=124.20 Aligned_cols=74 Identities=32% Similarity=0.557 Sum_probs=33.8
Q ss_pred CCCCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1353 DSDTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1353 ~~~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
++.+...|.||++|+|.+|.|++||.|++||+|++||+|||+.+|+||.+|+|.++.+++|+.|..|++|++|+
T Consensus 21 ~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~ie 94 (94)
T 2jku_A 21 QSMTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVGEGDLLVELE 94 (94)
T ss_dssp ---CCCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC------------------------------------
T ss_pred CCCCceEEECCCCEEEEEEECCCCCEEcCCCEEEEEecccccEEEECCCCEEEEEEcCCCcCEECCCCEEEEEC
Confidence 34467789999999999999999999999999999999999999999999999999999999999999999875
No 104
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=99.24 E-value=6.4e-12 Score=123.02 Aligned_cols=63 Identities=16% Similarity=0.268 Sum_probs=61.1
Q ss_pred CCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCC-eeCCCCEEEEEe
Q psy15244 1364 MPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGG-QVAQNDLVVVLD 1426 (1427)
Q Consensus 1364 m~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~-~V~~g~~L~~i~ 1426 (1427)
.+|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+ .|..|++|++|+
T Consensus 20 ~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K~~~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~i~ 83 (108)
T 2dne_A 20 QAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICITV 83 (108)
T ss_dssp CEEEEEECSSCTTCEECTTSEEEEEECSSCEEEEECSSSEEEEECSSCTTCCSEETTCEEEEEE
T ss_pred ccEEEEEEEcCCCCEecCCCEEEEEEcCcceeEEeCCCCEEEEEEEeCCCCeeecCCCEEEEEe
Confidence 579999999999999999999999999999999999999999999999999 899999999885
No 105
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=99.22 E-value=1.4e-11 Score=123.67 Aligned_cols=63 Identities=19% Similarity=0.317 Sum_probs=60.8
Q ss_pred CCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCC-eeCCCCEEEEEe
Q psy15244 1364 MPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGG-QVAQNDLVVVLD 1426 (1427)
Q Consensus 1364 m~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~-~V~~g~~L~~i~ 1426 (1427)
..|+|++|+|++||.|++||+|++||+|||+++|.||.+|+|.++++++|+ .|..|++|++|+
T Consensus 40 ~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~~~~I~Ap~~G~V~~i~v~~Gd~~V~~G~~L~~i~ 103 (128)
T 1y8o_B 40 TMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIV 103 (128)
T ss_dssp SEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCSEETTCEEEEEE
T ss_pred ccEEEEEEecCCCCEecCCCEEEEEEcCcceeEEeCCCCeEEEEEEeCCCCeeecCCCEEEEEe
Confidence 469999999999999999999999999999999999999999999999998 899999999986
No 106
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=99.20 E-value=1.5e-11 Score=164.70 Aligned_cols=72 Identities=31% Similarity=0.441 Sum_probs=69.1
Q ss_pred CCCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEE
Q psy15244 1354 SDTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVL 1425 (1427)
Q Consensus 1354 ~~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i 1425 (1427)
+.+...|.|||+|+|++|+|++||.|++||+|++||+||||++|.||.+|+|+++.|++|+.|+.|++|++|
T Consensus 1164 ~~~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~v~ap~~G~v~~i~v~~G~~V~~G~~l~~i 1235 (1236)
T 3va7_A 1164 PDDAELLYSEYTGRFWKPVAAVGDHVEAGDGVIIIEAMKTEMVVGATKSGKVYKILHKNGDMVEAGDLVAVI 1235 (1236)
T ss_dssp CTTCEEEECSSCEEEEEESSCTTCEECSSCEEEEEEETTEEEEEECSSCEEEEEECCCTTCEECTTCEEEEE
T ss_pred CCCCcEEeCCCcEEEEEEEcCCCCEECCCCEEEEEEecCcceeEecCCCeEEEEEEeCCcCEeCCCCEEEEe
Confidence 346678999999999999999999999999999999999999999999999999999999999999999987
No 107
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=99.19 E-value=2.8e-11 Score=116.83 Aligned_cols=72 Identities=40% Similarity=0.582 Sum_probs=69.2
Q ss_pred CCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1355 DTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1355 ~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
.+...|.||++|+|.+|+|++||.|++||+|+.|++|||+.+|+||.+|+|.++.+++|+.|..|++|++|.
T Consensus 12 ~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~i~ 83 (99)
T 2ejm_A 12 ETQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFE 83 (99)
T ss_dssp SCCSSCBCSSSEEEEEECCCTTEEECSSCEEEEEESSSSEEEEECSSCEEEEEESCCTTEEECTTCBCEEEC
T ss_pred CCceEEecCCCEEEEEEECCCCCEECCCCEEEEEEccceeEEEECCCCeEEEEEEcCCCCEECCCCEEEEEE
Confidence 467889999999999999999999999999999999999999999999999999999999999999999875
No 108
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=99.18 E-value=5.5e-12 Score=117.04 Aligned_cols=68 Identities=35% Similarity=0.573 Sum_probs=64.8
Q ss_pred ceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1359 EIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1359 ~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
.++++++|+|.+|+|++||.|++||+|+++|+|||+++|+||.+|+|.++++++|+.|..|++|++|+
T Consensus 9 ~~g~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (81)
T 1gjx_A 9 DIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVE 76 (81)
T ss_dssp CCSSCSSEEEEEECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSSCEECSSSCCCEEC
T ss_pred CCCCCCcEEEEEEEcCCCCEECCCCEEEEEEeCCcEEEEECCCCEEEEEEecCCCCEeCCCCEEEEEE
Confidence 35578999999999999999999999999999999999999999999999999999999999999875
No 109
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.16 E-value=3.3e-11 Score=111.52 Aligned_cols=62 Identities=34% Similarity=0.484 Sum_probs=61.0
Q ss_pred CeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1365 PGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1365 ~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
+|+|.+|+|++||.|++||+|+++|+|||+++|+||.+|+|.++++++|+.|..|++|+.|+
T Consensus 14 ~G~v~~~~v~~G~~V~~G~~l~~ie~~~~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~ 75 (80)
T 1qjo_A 14 EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFE 75 (80)
T ss_dssp CEEEEECCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTTCEECTTCCCEEEE
T ss_pred CEEEEEEEcCCCCEECCCCEEEEEEcCCceEEEeCCCCEEEEEEecCCCCEECCCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999986
No 110
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=99.13 E-value=5.6e-11 Score=109.70 Aligned_cols=61 Identities=26% Similarity=0.483 Sum_probs=59.5
Q ss_pred CeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1365 PGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1365 ~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
+ +|.+|+|++||.|++||+|+++|+|||+++|+||.+|+|.++++++|+.|..|++|+.|+
T Consensus 13 ~-~i~~~~v~~Gd~V~~G~~l~~le~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~ 73 (79)
T 1iyu_A 13 G-EVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELE 73 (79)
T ss_dssp E-EEEEECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTTCEEETTSEEEEEE
T ss_pred C-EEEEEecCCCCEEcCCCEEEEEEccceEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEe
Confidence 6 999999999999999999999999999999999999999999999999999999999886
No 111
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=99.11 E-value=6.2e-12 Score=117.92 Aligned_cols=68 Identities=34% Similarity=0.489 Sum_probs=65.4
Q ss_pred ceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1359 EIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1359 ~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
.|.+|..|+|.+|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.|..|++|+.|.
T Consensus 4 ~i~~p~~G~v~~~~v~~Gd~V~~G~~L~~ie~~k~~~~i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~ 71 (85)
T 2k7v_A 4 EVNVPDIVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFE 71 (85)
T ss_dssp CCCCCSCCCCCSCCCSSSCCCCCSSSCCCCSCCCSEEEEECSSCBCCCEECSCTTCCBCTTSEEEEEE
T ss_pred EEECCCeEEEEEEEcCCCCEEcCCCEEEEEEccccEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEE
Confidence 57788889999999999999999999999999999999999999999999999999999999999985
No 112
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=99.10 E-value=4.6e-11 Score=134.39 Aligned_cols=197 Identities=13% Similarity=0.138 Sum_probs=132.5
Q ss_pred CCEEEeCCC--cccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCccccCCCH-----------
Q psy15244 131 VDAIHPGYG--FLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGTTEPVTDV----------- 197 (1427)
Q Consensus 131 vDaI~pg~g--flsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~~v~s~----------- 197 (1427)
+|.+++.|+ |-.+ ...+.++..+. |+-++..++..++||....++|+++|||+|++.. +...
T Consensus 58 ~d~lisf~s~gfpl~--kai~y~~lr~p-~~INd~~~q~~~~DK~~~~~iL~~~gIPtP~t~~--~~rd~~~~~~~~~~e 132 (330)
T 3t7a_A 58 CDCLISFHSKGFPLD--KAVAYAKLRNP-FVINDLNMQYLIQDRREVYSILQAEGILLPRYAI--LNRDPNNPKECNLIE 132 (330)
T ss_dssp CSEEEECCCTTCCHH--HHHHHHHHHCC-EESBCSTHHHHHTBHHHHHHHHHHTTCCCCCEEE--ECCBTTBGGGSSEEE
T ss_pred CCEEEEeccCCCcHH--HHHHHHHHhCC-ceeCCHHHHHHHHHHHHHHHHHHHcCCCCCCEEE--EeCCCCCccccceec
Confidence 677887653 4322 23445555564 4559999999999999999999999999999862 2221
Q ss_pred -HHHHH-HHHhcCCcEEEeecCCC-----------CCcC----eEEecCHHHH---HHHHHHHHHHHHHccCCCcEEEEe
Q psy15244 198 -DKVKE-FCDEVEFPVILKAAFGG-----------GGRG----MRMVANKDAI---EENFKRAQSEALASFGKDDMLVEK 257 (1427)
Q Consensus 198 -eea~~-~a~~iGyPvVVKP~~Gg-----------GGrG----V~iV~s~eeL---~~a~~~a~~ea~~~fg~~~vlVEe 257 (1427)
+++.+ ..+.+++|+|+||..|. .|-| ++++.+.+.. +..+ -.+..+++||
T Consensus 133 ~~d~i~~~g~~l~kPfVeKPv~Gsdhni~iyyp~s~GgG~~RLfrki~n~sS~~~~~~~v----------r~~~~~i~QE 202 (330)
T 3t7a_A 133 GEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNV----------RKTGSYIYEE 202 (330)
T ss_dssp CSSEEEETTEEEESSEEEEESBTTCCCCEEECCGGGTCCEEEEEEEETTEEEEEESCCSC----------CSSSCEEEEE
T ss_pred cchhhhhccccccCCeeEcccccccCcceeecccccCCchhhhhhhhCCcccccChhhhh----------ccCCcEEEEe
Confidence 11111 23467899999999995 2223 4455543331 1111 1157899999
Q ss_pred eccC-CceEEEEEEecccccEEEeeeeccc----cccccceEEEE-ccCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEE
Q psy15244 258 YIDR-PRHIEVQILGDKYGDVVHLYERDCS----MQRRYQKVIQI-APAQDMSVSVRDAITETSVRLAKSLGYSNAGTVE 331 (1427)
Q Consensus 258 yIeg-greieVqvl~Dg~G~vv~l~erd~s----~qr~~qk~ie~-aPa~~l~~e~~~~l~~~a~~l~~alg~~G~~~VE 331 (1427)
||+. |+.+-|.++++ ++++-..|... .-|++..-.+. .|. .|++ +..+.|.++++++|.. ++.||
T Consensus 203 FI~~~G~DIRv~vVG~---~vv~Am~R~sp~~~G~~r~N~~gG~~~~~v-~Lt~----eek~iA~kaa~a~G~~-v~GVD 273 (330)
T 3t7a_A 203 FMPTDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEVRYPV-ILNA----REKLIAWKVCLAFKQT-VCGFD 273 (330)
T ss_dssp CCCCSSEEEEEEEEST---TCEEEEEEECTTSSCBCCBCTTSCBCCEEC-CCCH----HHHHHHHHHHHHTTBS-EEEEE
T ss_pred ccCCCCceEEEEEECC---EEEEEEEEeCCCCCCcEEEcCCCCceeeee-cCCH----HHHHHHHHHHHHhCCc-eEEEE
Confidence 9984 68999988875 56776666432 12222222222 244 4675 4578899999999985 88899
Q ss_pred EEEcCCCcEEEEeeCCCCCCc
Q psy15244 332 FLLDKDDNFYFIEVNPRLQVE 352 (1427)
Q Consensus 332 flvd~dG~~yfIEINpRl~ge 352 (1427)
++.+.+ .+|++|+|.+..+.
T Consensus 274 lLrs~~-~~~V~EVNg~~fvk 293 (330)
T 3t7a_A 274 LLRANG-QSYVCDVNGFSFVK 293 (330)
T ss_dssp EEEETT-EEEEEEEEESCCCS
T ss_pred EEEECC-ccEEEEeCCCcccc
Confidence 999864 49999999999975
No 113
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.10 E-value=3.6e-12 Score=118.11 Aligned_cols=64 Identities=22% Similarity=0.332 Sum_probs=61.6
Q ss_pred CCCeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1363 PMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1363 Pm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
..+|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.|..|++|++|+
T Consensus 14 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~ 77 (80)
T 1pmr_A 14 VADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLR 77 (80)
T ss_dssp CSCEECCBCCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCC
T ss_pred CccEEEEEEECCCcCEECCCCEEEEEEccceEEEEECCCCEEEEEEEcCCcCEECCCCEEEEEe
Confidence 4689999999999999999999999999999999999999999999999999999999999875
No 114
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=98.99 E-value=1.6e-09 Score=129.39 Aligned_cols=108 Identities=19% Similarity=0.315 Sum_probs=89.7
Q ss_pred CHHHHHHHHHhCCCCCCCCccccCCCHHHHHHHHHhcCCcEEEeecCCCCCc----CeEEecCHHHHHHHHHHHHHHHHH
Q psy15244 171 DKVLARDAALKADVPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAAFGGGGR----GMRMVANKDAIEENFKRAQSEALA 246 (1427)
Q Consensus 171 DK~~~r~~a~~aGVpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~~GgGGr----GV~iV~s~eeL~~a~~~a~~ea~~ 246 (1427)
+-+.+|++++++|||+|++. .+.+.+++.++++++|||+||||....||+ ||+++++++|+.++++++......
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~--~~~s~eea~~aa~~lG~PvVvKa~~~~ggkg~~GGV~l~~s~ee~~~a~~~~~~~~~~ 81 (397)
T 3ufx_B 4 HEYQAKEILARYGVPVPPGK--VAYTPEEAKRIAEEFGKRVVIKAQVHVGGRGKAGGVKLADTPQEAYEKAQAILGMNIK 81 (397)
T ss_dssp CHHHHHHHHHHTTCCCCCEE--EESSHHHHHHHHHHHTSCEEEEECCSSSCTTTTTCEEEESSHHHHHHHHHHHTTCEET
T ss_pred CHHHHHHHHHHCCCCCCCeE--EECCHHHHHHHHHHcCCCEEEEEccccCCCCccceEEEeCCHHHHHHHHHHhhhhhcc
Confidence 45789999999999999997 789999999999999999999999866665 999999999999999876542211
Q ss_pred ccCCCcEEEEeeccCCceEEEEEEeccccc-EEEe
Q psy15244 247 SFGKDDMLVEKYIDRPRHIEVQILGDKYGD-VVHL 280 (1427)
Q Consensus 247 ~fg~~~vlVEeyIeggreieVqvl~Dg~G~-vv~l 280 (1427)
.+....++||+|++.++|+.+.++.|.... .+.+
T Consensus 82 g~~~~~vlVEe~v~~g~El~vgv~~D~~~g~pvi~ 116 (397)
T 3ufx_B 82 GLTVKKVLVAEAVDIAKEYYAGLILDRAKKRVVLM 116 (397)
T ss_dssp TEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEE
T ss_pred CCccceEEEEEeecCCeeEEEEEEecCCCCCcEEE
Confidence 222468999999998999999999997643 4433
No 115
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=98.87 E-value=8.3e-10 Score=111.74 Aligned_cols=68 Identities=18% Similarity=0.341 Sum_probs=62.6
Q ss_pred ceecCCCeEEEEEEe-cCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEE---EecCCCeeC---CCC-EEEEEe
Q psy15244 1359 EIGAPMPGNIIEVKV-KVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEI---FVEVGGQVA---QND-LVVVLD 1426 (1427)
Q Consensus 1359 ~V~APm~G~v~~v~V-~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i---~v~~G~~V~---~g~-~L~~i~ 1426 (1427)
.+.+|++|.|+.+.+ ++||.|++||++++||||||+++|.||++|+|.++ .++.|+.|+ .|+ .|+.|+
T Consensus 38 ~~a~~~lG~i~~V~lp~vGd~V~~Gd~l~~VEs~K~~~eI~aPvsG~V~eiN~~l~~~p~~Vn~dp~g~GwL~~i~ 113 (136)
T 1zko_A 38 NHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKME 113 (136)
T ss_dssp HHHHHHHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCEEEE
T ss_pred hhhcccCCCcEEEEecCCCCEEeCCCEEEEEEEccEeEEEecCCCeEEEEEehhhccCccCcccCCCCCeEEEEEE
Confidence 466799999998888 99999999999999999999999999999999999 788999998 887 888775
No 116
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=98.78 E-value=7.1e-10 Score=133.56 Aligned_cols=67 Identities=31% Similarity=0.426 Sum_probs=0.0
Q ss_pred eecCCC-eEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1360 IGAPMP-GNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1360 V~APm~-G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
++..|. |+|++|+|++||.|++||+|++||+|||+++|.||.+|+|.++++++|+.|..|++|++|+
T Consensus 10 lg~~~~eg~i~~w~v~~Gd~V~~gd~l~~vEt~K~~~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~ 77 (428)
T 3dva_I 10 IGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTVATVGQTLITLD 77 (428)
T ss_dssp --------------------------------------------------------------------
T ss_pred CCCCCccEEEEEEEcCCCCEECCCCEEEEEEeCCeeEEEecCCCeEEEEEEeCCCCEeCCCCEEEEEe
Confidence 333454 9999999999999999999999999999999999999999999999999999999999885
No 117
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=98.71 E-value=1.5e-09 Score=119.77 Aligned_cols=62 Identities=29% Similarity=0.433 Sum_probs=0.0
Q ss_pred CeEEEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCe-eCCCCEEEEEe
Q psy15244 1365 PGNIIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQ-VAQNDLVVVLD 1426 (1427)
Q Consensus 1365 ~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~-V~~g~~L~~i~ 1426 (1427)
.|+|++|+|++||.|++||+|++||+|||+++|.||.+|+|.++++++|+. |..|++|++|+
T Consensus 17 eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~~~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~ 79 (229)
T 1zy8_K 17 EGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIV 79 (229)
T ss_dssp ---------------------------------------------------------------
T ss_pred cEEEEEEecCCCCEeCCCCEEEEEecCCceeEEecCCCeEEEEEEecCCCeeecCCCEEEEEe
Confidence 599999999999999999999999999999999999999999999999997 99999999874
No 118
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=98.67 E-value=1.4e-08 Score=100.56 Aligned_cols=68 Identities=25% Similarity=0.405 Sum_probs=63.5
Q ss_pred ceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCcee-----------------------------eeecCCCeEEEEEE
Q psy15244 1359 EIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTET-----------------------------LIHASADGVVKEIF 1409 (1427)
Q Consensus 1359 ~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~-----------------------------~i~Ap~~G~V~~i~ 1409 (1427)
.|.||++|.|.+|.|++||.|++||+|+.|++.+.+. .|+||++|+|.++.
T Consensus 3 ~v~a~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~a~~~~~r~~~L~~~~~~s~~~~~~~~~~~~~~~i~AP~~G~V~~~~ 82 (116)
T 2k32_A 3 IIKPQVSGVIVNKLFKAGDKVKKGQTLFIIEQDQASKDFNRSKALFSQSAISQKEYDSSLATLDHTEIKAPFDGTIGDAL 82 (116)
T ss_dssp EECCSSCEEEEEECSCTTSEECTTCEEEEEECTTTSHHHHHHHHHTGGGCCSTTTTTHHHHTTTEEEEECSSSEEECCCS
T ss_pred EEeCcCCEEEEEEECCCcCEECCCCEEEEECHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHhhcCCEEEcCCCEEEEEEE
Confidence 5889999999999999999999999999999987664 99999999999999
Q ss_pred ecCCCeeCCC-CEEEEEe
Q psy15244 1410 VEVGGQVAQN-DLVVVLD 1426 (1427)
Q Consensus 1410 v~~G~~V~~g-~~L~~i~ 1426 (1427)
+++|+.|..| ++|+.|.
T Consensus 83 ~~~G~~v~~g~~~l~~i~ 100 (116)
T 2k32_A 83 VNIGDYVSASTTELVRVT 100 (116)
T ss_dssp CCTTCEECTTTSCCEEEE
T ss_pred CCCCCEEcCCCcEEEEEE
Confidence 9999999998 9998874
No 119
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=98.39 E-value=7.8e-08 Score=96.87 Aligned_cols=68 Identities=16% Similarity=0.272 Sum_probs=56.6
Q ss_pred ceecCCCeEEEEEEe-cCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCC---eeC---CCC-EEEEEe
Q psy15244 1359 EIGAPMPGNIIEVKV-KVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGG---QVA---QND-LVVVLD 1426 (1427)
Q Consensus 1359 ~V~APm~G~v~~v~V-~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~---~V~---~g~-~L~~i~ 1426 (1427)
....|+.|.|+.+.+ ++|+.|++||++++||+|||+++|.||++|+|.+++++.++ .|+ .|+ -|+.|+
T Consensus 29 d~a~~~lG~i~~v~lp~~G~~V~~g~~l~~vEs~K~~~~I~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i~ 104 (131)
T 1hpc_A 29 DHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIK 104 (131)
T ss_dssp HHHHHHHCSEEEEECCCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHHHHCTTHHHHCTTTTTCCEEEE
T ss_pred hhhcccCCCceEEEecCCCCEEeCCCEEEEEEecceeEEEecCCCeEEEEEhhhhhcChhhhccCCCCCceEEEEE
Confidence 355689999999988 99999999999999999999999999999999999866554 453 333 566554
No 120
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=98.24 E-value=4.5e-07 Score=91.02 Aligned_cols=68 Identities=19% Similarity=0.248 Sum_probs=55.7
Q ss_pred ceecCCCeEEEEEEe-cCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCC---CeeC---CCC-EEEEEe
Q psy15244 1359 EIGAPMPGNIIEVKV-KVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVG---GQVA---QND-LVVVLD 1426 (1427)
Q Consensus 1359 ~V~APm~G~v~~v~V-~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G---~~V~---~g~-~L~~i~ 1426 (1427)
....|+.|.|+.+.+ ++|+.|++||++++||+|||.++|.||++|+|.+++.+.+ +.|+ .|+ -|+.|+
T Consensus 30 d~a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evN~~l~~~P~lvn~dpy~~gWl~~i~ 105 (128)
T 3a7l_A 30 EHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIK 105 (128)
T ss_dssp HHHHHHHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGTCTTHHHHCTTTTTCCEEEE
T ss_pred hHHhccCCceEEEEecCCCCEEeCCCEEEEEEecceeeEEecCCCeEEEEEhhhhccChHHhccCCCCCccEEEEE
Confidence 345688899999888 9999999999999999999999999999999999987554 4444 344 555543
No 121
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=98.20 E-value=3.8e-07 Score=91.61 Aligned_cols=68 Identities=22% Similarity=0.352 Sum_probs=55.3
Q ss_pred ceecCCCeEEEEEEe-cCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEec---CCCee---CCCC-EEEEEe
Q psy15244 1359 EIGAPMPGNIIEVKV-KVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVE---VGGQV---AQND-LVVVLD 1426 (1427)
Q Consensus 1359 ~V~APm~G~v~~v~V-~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~---~G~~V---~~g~-~L~~i~ 1426 (1427)
...+|+.|.|+.+.+ ++|++|++||++++||+|||.++|.||++|+|.+++++ ..+.| ..|+ -|+.|+
T Consensus 29 ~~a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i~ 104 (128)
T 1onl_A 29 DYAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLK 104 (128)
T ss_dssp HHHHHHHCSEEEEECBCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEECTHHHHCTTHHHHCTTTTTCCEEEE
T ss_pred hHHhhcCCCceEEEecCCCCEEeCCCEEEEEEEcceeeEEecCCCeEEEEEhhhhccChhhhccCCCCCccEEEEE
Confidence 345688899988888 99999999999999999999999999999999999765 34444 3344 555553
No 122
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.03 E-value=1.6e-05 Score=89.91 Aligned_cols=188 Identities=21% Similarity=0.129 Sum_probs=123.6
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCch---------hhhhhccc-----cChHHHHHHHHHhCCCCceeeeecccc
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVS---------HTCLKFLK-----ECPWERLAELRELIPNIPFQMILRGNS 743 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatf---------d~~~rfl~-----e~p~erl~~lr~~~p~~~~qml~Rg~n 743 (1427)
.+.++.+++++.|.+ .|++.||++.+..- .++.+-|. ++-++-++.+|+..|++++.++
T Consensus 28 p~~~~~~~~~~~l~~--~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m----- 100 (262)
T 2ekc_A 28 PDYETSLKAFKEVLK--NGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLM----- 100 (262)
T ss_dssp SCHHHHHHHHHHHHH--TTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE-----
T ss_pred CChHHHHHHHHHHHH--cCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEE-----
Confidence 556789999999999 89999999876421 00111111 1124557888988878886553
Q ss_pred cccccCCC-cchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHH
Q psy15244 744 LVGYSNYS-PAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYY 822 (1427)
Q Consensus 744 ~vgy~~~~-~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~ 822 (1427)
+|.+-. ..-...|++.+.++|+|.+-+.|.. .+.+...++.+++.|. .. +.+ ..| ..+.+.+
T Consensus 101 --~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~--~ee~~~~~~~~~~~gl---~~---i~l----~~p---~t~~~rl 163 (262)
T 2ekc_A 101 --TYYNPIFRIGLEKFCRLSREKGIDGFIVPDLP--PEEAEELKAVMKKYVL---SF---VPL----GAP---TSTRKRI 163 (262)
T ss_dssp --CCHHHHHHHCHHHHHHHHHHTTCCEEECTTCC--HHHHHHHHHHHHHTTC---EE---CCE----ECT---TCCHHHH
T ss_pred --ecCcHHHHhhHHHHHHHHHHcCCCEEEECCCC--HHHHHHHHHHHHHcCC---cE---EEE----eCC---CCCHHHH
Confidence 232200 0013689999999999988886543 4778889999999998 32 122 244 2566777
Q ss_pred HHHHHHHHHCCCCEEEEccccCcCCHHH---HHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEe
Q psy15244 823 EDLAKQLVESGAQVLCLKDMAGLLKPTA---AKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 823 ~~~a~~l~~~Gad~i~i~Dt~G~l~P~~---~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~ 895 (1427)
.++++..... +..+.+.+++|..+|.. ..++++.+|+.. ++||.+ .+|...++.++++.+|||.|=+
T Consensus 164 ~~ia~~a~gf-iy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~v----G~GI~t~e~~~~~~~gADgvIV 233 (262)
T 2ekc_A 164 KLICEAADEM-TYFVSVTGTTGAREKLPYERIKKKVEEYRELC-DKPVVV----GFGVSKKEHAREIGSFADGVVV 233 (262)
T ss_dssp HHHHHHCSSC-EEEESSCC---------CHHHHHHHHHHHHHC-CSCEEE----ESSCCSHHHHHHHHTTSSEEEE
T ss_pred HHHHHhCCCC-EEEEecCCccCCCCCcCcccHHHHHHHHHhhc-CCCEEE----eCCCCCHHHHHHHHcCCCEEEE
Confidence 7766554321 34556668999988754 778999999987 889887 7888888888889999987644
No 123
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=97.78 E-value=1.5e-05 Score=96.02 Aligned_cols=71 Identities=24% Similarity=0.362 Sum_probs=63.3
Q ss_pred CCCceecCCCeEEEEEEe-cCCCEEecCCEEEEEEcC-------------------------------------------
Q psy15244 1356 TAGEIGAPMPGNIIEVKV-KVGQQVKKNDVLIVMSVM------------------------------------------- 1391 (1427)
Q Consensus 1356 ~~~~V~APm~G~v~~v~V-~~Gd~V~~G~~l~~ieam------------------------------------------- 1391 (1427)
+...|.++.+|.|.++.| ++||.|++||+|+.|++-
T Consensus 120 ~~~~v~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~l~~aq~~~~~a~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~ 199 (413)
T 3ne5_B 120 QYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLI 199 (413)
T ss_dssp EEEEECCSSCEEEEEECSCCTTCEECTTCEEEEEECCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ceEEEecccCEEEEEEEeCCCCCEEcCCCEEEEEcCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 346799999999999999 999999999999999841
Q ss_pred -----CceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1392 -----KTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1392 -----Kme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
.-...|+||++|+|.++.+++|+.|..|++|++|.
T Consensus 200 ~~~~~~~~~~I~AP~~G~V~~~~v~~G~~V~~G~~l~~I~ 239 (413)
T 3ne5_B 200 ATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQ 239 (413)
T ss_dssp HHTSCCCEEEEECSSSEEEEECCCCTTCEECTTSCSEEEE
T ss_pred HhccccccEEEEcCCCeEEEEEEcCCCCEECCCCcEEEEe
Confidence 23468999999999999999999999999999773
No 124
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=97.75 E-value=2.8e-05 Score=91.81 Aligned_cols=75 Identities=19% Similarity=0.349 Sum_probs=65.4
Q ss_pred CCCCCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCCc--------------------------------------
Q psy15244 1352 ADSDTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMKT-------------------------------------- 1393 (1427)
Q Consensus 1352 a~~~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamKm-------------------------------------- 1393 (1427)
+++.....|.|+.+|.|.+++|++||.|++||+|+.|+.-..
T Consensus 52 ~~p~~~~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~l~~a~~~l~~a~a~l~~a~~~~~r~~~L~~~~~~s~~~~ 131 (359)
T 3lnn_A 52 ADPAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDF 131 (359)
T ss_dssp CCSSSEEEECCSSCEEEEECCSCTTCEECTTCEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCTTH
T ss_pred ECCCcEEEEeccCCEEEEEEEcCCCCEEcCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 334456789999999999999999999999999999987432
Q ss_pred --------------------------------------eeeeecCCCeEEEEEEecCCCeeCC-CCEEEEEe
Q psy15244 1394 --------------------------------------ETLIHASADGVVKEIFVEVGGQVAQ-NDLVVVLD 1426 (1427)
Q Consensus 1394 --------------------------------------e~~i~Ap~~G~V~~i~v~~G~~V~~-g~~L~~i~ 1426 (1427)
.+.|+||++|+|..+.+.+|+.|.. |++|+.|.
T Consensus 132 ~~a~~~~~~a~a~l~~a~~~l~~~~~~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~~v~~~g~~l~~i~ 203 (359)
T 3lnn_A 132 EQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGGHILAVRSPINGRVVDLNAATGAYWNDTTASLMTVA 203 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGBCSSTTSEEEEECSSCEEEEECCCCBTCEECCSSCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhhcccceEEEECCCCEEEEEeecCCCceeCCCCcceEEEe
Confidence 2579999999999999999999999 99888763
No 125
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=97.60 E-value=1.5e-05 Score=90.61 Aligned_cols=69 Identities=16% Similarity=0.238 Sum_probs=60.9
Q ss_pred CCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCC--------------------------------------------
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMK-------------------------------------------- 1392 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamK-------------------------------------------- 1392 (1427)
...|.||.+|.|.+++|++||.|++||+|+.|+.-.
T Consensus 22 ~~~v~a~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~ 101 (277)
T 2f1m_A 22 IAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYD 101 (277)
T ss_dssp EEEECCSSCEEEEEECSCTTCEECTTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHH
T ss_pred EEEEEccccEEEEEEEcCCCCEecCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHH
Confidence 457899999999999999999999999999997631
Q ss_pred ---------------------------ceeeeecCCCeEEEEEEecCCCeeCCC--CEEEEE
Q psy15244 1393 ---------------------------TETLIHASADGVVKEIFVEVGGQVAQN--DLVVVL 1425 (1427)
Q Consensus 1393 ---------------------------me~~i~Ap~~G~V~~i~v~~G~~V~~g--~~L~~i 1425 (1427)
-...|+||++|+|..+.+++|+.|..| ++|+.|
T Consensus 102 ~a~~~~~~a~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~~~~~G~~v~~g~~~~l~~i 163 (277)
T 2f1m_A 102 QALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATV 163 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCCSSCBTCEECTTCSSCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeEEcCCCCEEcCCCCceeEEE
Confidence 125899999999999999999999999 578776
No 126
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A
Probab=97.59 E-value=6.1e-05 Score=74.92 Aligned_cols=52 Identities=17% Similarity=0.311 Sum_probs=46.2
Q ss_pred CCCeEEEEEEe-cCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCC
Q psy15244 1363 PMPGNIIEVKV-KVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGG 1414 (1427)
Q Consensus 1363 Pm~G~v~~v~V-~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~ 1414 (1427)
.+.|.|+-|.+ +.|++|++|+++++||+||+..+|.||++|+|.+++.+..+
T Consensus 29 ~~lGdiv~velp~vG~~v~~G~~~~~VES~K~~sdi~aPvsG~VvevN~~l~~ 81 (125)
T 3klr_A 29 EALGDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALAE 81 (125)
T ss_dssp HHHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGTT
T ss_pred hhCCCeEEEEeCCCCCEEcCCCEEEEEEEcceeeeeecCCCEEEEEEhhhhhh
Confidence 45688988877 79999999999999999999999999999999999765544
No 127
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=97.56 E-value=4.7e-05 Score=89.16 Aligned_cols=70 Identities=27% Similarity=0.385 Sum_probs=61.1
Q ss_pred CCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCC-------------------------------------------
Q psy15244 1356 TAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMK------------------------------------------- 1392 (1427)
Q Consensus 1356 ~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamK------------------------------------------- 1392 (1427)
+...|.++.+|.|.+++|++||.|++||+|+.|+.-.
T Consensus 30 ~~~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~ 109 (341)
T 3fpp_A 30 RKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQ 109 (341)
T ss_dssp SEEECCCSSCEEEEEECCCTTCEECTTCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTS
T ss_pred EEEEEeccCCcEEEEEEeCCCCEECCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4567899999999999999999999999999998631
Q ss_pred ------------------------------------------ceeeeecCCCeEEEEEEecCCCeeCCCCE---EEEE
Q psy15244 1393 ------------------------------------------TETLIHASADGVVKEIFVEVGGQVAQNDL---VVVL 1425 (1427)
Q Consensus 1393 ------------------------------------------me~~i~Ap~~G~V~~i~v~~G~~V~~g~~---L~~i 1425 (1427)
-.+.|+||++|+|.++.+.+|+.|..|+. |+.|
T Consensus 110 ~~s~~~~~~a~~~~~~~~a~l~~~~a~l~~a~a~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i 187 (341)
T 3fpp_A 110 AVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTL 187 (341)
T ss_dssp SSTTHHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHTTTTTTTTSSEEECSSSEEEEEESSCTTCEECCTTSCCCCEEE
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCEEECCCCeEEEEEecCCCCEEecCCCCceEEEE
Confidence 11569999999999999999999999986 7655
No 128
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.52 E-value=0.00058 Score=77.23 Aligned_cols=182 Identities=16% Similarity=0.132 Sum_probs=119.6
Q ss_pred CHHHHHHHHHHHHhhcCCccEEeccCCC--------chhh-hhhcccc-----ChHHHHHHHHHhCCCCceeeeeccccc
Q psy15244 679 RTYDLKKVSPFVANRFNNLYSLEMWGGA--------VSHT-CLKFLKE-----CPWERLAELRELIPNIPFQMILRGNSL 744 (1427)
Q Consensus 679 ~t~d~l~ia~~l~~~~~G~~~iE~~gga--------tfd~-~~rfl~e-----~p~erl~~lr~~~p~~~~qml~Rg~n~ 744 (1427)
+.+.-+++++.|.+ .|.+.||++-+. +... +.|-|.. +-++.++++|+..+++|+-.+
T Consensus 32 ~~~~~~~~~~~l~~--~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm------ 103 (271)
T 3nav_A 32 NPEQSLAIMQTLID--AGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLL------ 103 (271)
T ss_dssp CHHHHHHHHHHHHH--TTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE------
T ss_pred CHHHHHHHHHHHHH--cCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEE------
Confidence 35678899999998 799999998543 2222 2333322 336778889888778886654
Q ss_pred ccccCCCc-chHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHH
Q psy15244 745 VGYSNYSP-AEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYE 823 (1427)
Q Consensus 745 vgy~~~~~-nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~ 823 (1427)
+|-|-.. -=++.|++.++++|+|.+-+.|-.- +......+.+++.|. .. +... .| ..+.+.+.
T Consensus 104 -~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~--ee~~~~~~~~~~~gl---~~---I~lv----ap---~t~~eri~ 167 (271)
T 3nav_A 104 -MYANLVYARGIDDFYQRCQKAGVDSVLIADVPT--NESQPFVAAAEKFGI---QP---IFIA----PP---TASDETLR 167 (271)
T ss_dssp -ECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCG--GGCHHHHHHHHHTTC---EE---EEEE----CT---TCCHHHHH
T ss_pred -ecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCH--HHHHHHHHHHHHcCC---eE---EEEE----CC---CCCHHHHH
Confidence 2322100 0147899999999999998876543 457788889999998 32 2222 44 34455444
Q ss_pred HHHHHHHHCCCCEEE---EccccCcCC--HHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHH-HHHhcCCEE
Q psy15244 824 DLAKQLVESGAQVLC---LKDMAGLLK--PTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLA-CVKAGADIV 893 (1427)
Q Consensus 824 ~~a~~l~~~Gad~i~---i~Dt~G~l~--P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~la-Ai~AGad~V 893 (1427)
++++ .+.+-|+ +.+++|.-+ |..+.++++.+|+.. ++|+.+ .+|.......+ ++.+|||.|
T Consensus 168 ~i~~----~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~v----GfGIst~e~~~~~~~~gADgv 234 (271)
T 3nav_A 168 AVAQ----LGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD-APPALL----GFGISEPAQVKQAIEAGAAGA 234 (271)
T ss_dssp HHHH----HCCSCEEECCCC--------CCHHHHHHHHHHHHTT-CCCEEE----CSSCCSHHHHHHHHHTTCSEE
T ss_pred HHHH----HCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc-CCCEEE----ECCCCCHHHHHHHHHcCCCEE
Confidence 4443 3434344 567788753 677899999999987 889887 56776566676 999999976
No 129
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*
Probab=97.43 E-value=0.00088 Score=78.94 Aligned_cols=154 Identities=20% Similarity=0.288 Sum_probs=88.9
Q ss_pred cCCcEEEeecCCCCCcCeEEecCHHHHHHHHHHHHHHHHHccCCCcEEEEeeccCC-------c--eEEEEEEecccccE
Q psy15244 207 VEFPVILKAAFGGGGRGMRMVANKDAIEENFKRAQSEALASFGKDDMLVEKYIDRP-------R--HIEVQILGDKYGDV 277 (1427)
Q Consensus 207 iGyPvVVKP~~GgGGrGV~iV~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIegg-------r--eieVqvl~Dg~G~v 277 (1427)
-+.++|+||..|+.|+|++++++.+++.+.++.. ...++||+||+++ + ++.+-++..+.-.
T Consensus 146 ~~~~wI~KP~~~srG~GI~l~~~~~~i~~~~~~~---------~~~~VvQkYI~~PlLi~~~grKFDlR~Yvlvts~l~- 215 (380)
T 3tig_A 146 EGNVWIAKSSSGAKGEGILISSDATELLDFIDNQ---------GQVHVIQKYLESPLLLEPGHRKFDIRSWVLVDNQYN- 215 (380)
T ss_dssp CCCCEEEEESCC----CCBCCSCSHHHHHHHHHH---------TSCEEEEECCSSBCCBTTTTBCEEEEEEEEECTTCC-
T ss_pred CCCeEEEeCCccCCCCCEEEeCCHHHHHHHHhcc---------CCcEEEEecccCceeecCCCceeEEEEEEEEcCCCE-
Confidence 3578999999999999999999999988776531 3689999999853 2 5555555543211
Q ss_pred EEee----eeccc-------------------cccccce-EE--EEccC---------------CCCCHHHHHHHHHHHH
Q psy15244 278 VHLY----ERDCS-------------------MQRRYQK-VI--QIAPA---------------QDMSVSVRDAITETSV 316 (1427)
Q Consensus 278 v~l~----erd~s-------------------~qr~~qk-~i--e~aPa---------------~~l~~e~~~~l~~~a~ 316 (1427)
+.++ -|-|+ +|..+.. .. +..-- ......+..+|.+.+.
T Consensus 216 vy~y~~g~~Rfa~~~y~~~~~~~~~~HLTN~~iqk~~~~~y~~~~~g~~~~~~~f~~yL~~~~~~~~~~~i~~~I~~ii~ 295 (380)
T 3tig_A 216 IYLYREGVLRTSSEPYSDTNFQDMTSHLTNHCIQKEHSKNYGRYEEGNEMFFEEFNQYLVTSLNINLENSILCQIKEIIR 295 (380)
T ss_dssp EEECSCCEEEECC----------------------------------CCBCHHHHHHHHSTTSSCCHHHHTHHHHHHHHH
T ss_pred EEEEcCCEEEecCCCcCccchhhhhhhccccccccccccccccccCCCcCcHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 1111 11121 1111100 00 00000 0011244556666666
Q ss_pred HHHHH----c-----CCC--CeEEEEEEEcCCCcEEEEeeCCCCCCchhHHHHHhCCCHHHHHHHHHcCC
Q psy15244 317 RLAKS----L-----GYS--NAGTVEFLLDKDDNFYFIEVNPRLQVEHTLSEEITGIDVVQSQIKIAQGK 375 (1427)
Q Consensus 317 ~l~~a----l-----g~~--G~~~VEflvd~dG~~yfIEINpRl~ge~~vte~~tGiDLv~~~i~iA~G~ 375 (1427)
..+.+ + ++. ....+||++|++.++++||||..++-...++. +|++..++++..-
T Consensus 296 ~~l~a~~~~i~~~~~~~~~FEl~G~D~lid~~l~~wllEVN~~P~~~q~~i~-----~l~~~~~~iavdp 360 (380)
T 3tig_A 296 VCLSCLEPAISTKYLPYHSFQLFGFDFMVDKNLKVWLIEVNGAPACAQKLYA-----ELCKGIVDLAISS 360 (380)
T ss_dssp HHHHHHHHHHCCTTSSSEECEEEEEEEEEBTTCCEEEEEEESSCCCCTTTHH-----HHHHHHHHHTTTT
T ss_pred HHHHHHHHHhhhcccCCceEEEEeEEEEEcCCCcEEEEEEeCCCCccHHhHH-----HHHHHHHHHhccc
Confidence 55543 2 122 36789999999999999999999986543321 3677777777654
No 130
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=97.40 E-value=0.00057 Score=77.21 Aligned_cols=183 Identities=16% Similarity=0.116 Sum_probs=118.6
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCc--------h-hhhhhcccc-----ChHHHHHHHHHhCCCCceeeeecccc
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAV--------S-HTCLKFLKE-----CPWERLAELRELIPNIPFQMILRGNS 743 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggat--------f-d~~~rfl~e-----~p~erl~~lr~~~p~~~~qml~Rg~n 743 (1427)
.+.+...++++.|.+ .|++.||++-+.+ . ..+.|-|.. +-++-++.+|+..+++++-.+
T Consensus 29 P~~~~~~~~~~~l~~--~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm----- 101 (267)
T 3vnd_A 29 PSPELSLKIIQTLVD--NGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLL----- 101 (267)
T ss_dssp SCHHHHHHHHHHHHH--TTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEE-----
T ss_pred CCHHHHHHHHHHHHH--cCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEE-----
Confidence 455778999999998 8999999984331 1 122233322 236778888887667775544
Q ss_pred cccccCCC-cchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHH
Q psy15244 744 LVGYSNYS-PAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYY 822 (1427)
Q Consensus 744 ~vgy~~~~-~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~ 822 (1427)
+|-|-. .-=.+.|++.++++|+|.+-+.|-.- +.....++.+++.|. .. +... +| ..+.+.+
T Consensus 102 --~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~--ee~~~~~~~~~~~gl---~~---i~li----aP---~t~~eri 164 (267)
T 3vnd_A 102 --LYANLVFANGIDEFYTKAQAAGVDSVLIADVPV--EESAPFSKAAKAHGI---AP---IFIA----PP---NADADTL 164 (267)
T ss_dssp --ECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCG--GGCHHHHHHHHHTTC---EE---ECEE----CT---TCCHHHH
T ss_pred --ecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCH--hhHHHHHHHHHHcCC---eE---EEEE----CC---CCCHHHH
Confidence 232100 00147899999999999998876543 567788889999998 32 2222 45 3455544
Q ss_pred HHHHHHHHHCCCCEEE---EccccCcCC--HHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHH-HHHhcCCEE
Q psy15244 823 EDLAKQLVESGAQVLC---LKDMAGLLK--PTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLA-CVKAGADIV 893 (1427)
Q Consensus 823 ~~~a~~l~~~Gad~i~---i~Dt~G~l~--P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~la-Ai~AGad~V 893 (1427)
..+++ .+-.-|+ +..++|..+ |..+.++++.+|+.. ++||.+ .+|.......+ ++.+|||.|
T Consensus 165 ~~i~~----~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~-~~pv~v----GfGI~~~e~~~~~~~~gADgv 232 (267)
T 3vnd_A 165 KMVSE----QGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN-APPPLL----GFGIAEPEQVRAAIKAGAAGA 232 (267)
T ss_dssp HHHHH----HCCSCEEESCCCCCC--------CHHHHHHHHHTTT-CCCEEE----CSSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHH----hCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc-CCCEEE----ECCcCCHHHHHHHHHcCCCEE
Confidence 44443 3333344 467777664 667899999999886 889887 66776566666 999999987
No 131
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=97.37 E-value=0.00067 Score=76.91 Aligned_cols=189 Identities=20% Similarity=0.113 Sum_probs=120.2
Q ss_pred ccCHHHHHHHHHHHHhhcCCccEEeccCCCc---hhh------hhhccc-----cChHHHHHHHHHhCCCCceeeeeccc
Q psy15244 677 RVRTYDLKKVSPFVANRFNNLYSLEMWGGAV---SHT------CLKFLK-----ECPWERLAELRELIPNIPFQMILRGN 742 (1427)
Q Consensus 677 r~~t~d~l~ia~~l~~~~~G~~~iE~~ggat---fd~------~~rfl~-----e~p~erl~~lr~~~p~~~~qml~Rg~ 742 (1427)
.++.++..++++.|.+ .|++.||++.+.. .|. +.+-+. ..-.+-++.+|+..+++++-.+
T Consensus 27 dp~~~~~~~~~~~l~~--~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm---- 100 (268)
T 1qop_A 27 DPGIEQSLKIIDTLID--AGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLL---- 100 (268)
T ss_dssp SSCHHHHHHHHHHHHH--TTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEE----
T ss_pred CCCHHHHHHHHHHHHH--CCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEE----
Confidence 3566889999999999 8999999986542 010 000000 0113557888888666775443
Q ss_pred ccccccC-CCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHH
Q psy15244 743 SLVGYSN-YSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNY 821 (1427)
Q Consensus 743 n~vgy~~-~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~ 821 (1427)
+|.+ .-..-...|++.+.++|+|.+-+.+... +.+...++.+++.|. .. +.. .+|. .+.+.
T Consensus 101 ---~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~--e~~~~~~~~~~~~g~---~~---i~l----~~p~---t~~~~ 162 (268)
T 1qop_A 101 ---MYANLVFNNGIDAFYARCEQVGVDSVLVADVPV--EESAPFRQAALRHNI---AP---IFI----CPPN---ADDDL 162 (268)
T ss_dssp ---ECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCG--GGCHHHHHHHHHTTC---EE---ECE----ECTT---CCHHH
T ss_pred ---EcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCH--HHHHHHHHHHHHcCC---cE---EEE----ECCC---CCHHH
Confidence 1211 0000136899999999999888876654 567788899999998 33 122 2452 55666
Q ss_pred HHHHHHHHHHCCCCEEEEccccCcCCH--HHHHHHHHHHHHHcCCceEEEeecCCcchHHHH-HHHHHHhcCCEEEe
Q psy15244 822 YEDLAKQLVESGAQVLCLKDMAGLLKP--TAAKLLIGSFREKYPNILIHVHTHDMAGTGVAT-TLACVKAGADIVDV 895 (1427)
Q Consensus 822 ~~~~a~~l~~~Gad~i~i~Dt~G~l~P--~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An-~laAi~AGad~VD~ 895 (1427)
+..+++..... +..+.+..++|..+| ....++++.+|+.. ++||.+ +.|...++ +.+++.+|||.|=+
T Consensus 163 i~~i~~~~~g~-v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~-~~pi~v----ggGI~t~e~~~~~~~agAD~vVV 233 (268)
T 1qop_A 163 LRQVASYGRGY-TYLLSRSGVTGAENRGALPLHHLIEKLKEYH-AAPALQ----GFGISSPEQVSAAVRAGAAGAIS 233 (268)
T ss_dssp HHHHHHHCCSC-EEEESSSSCCCSSSCC--CCHHHHHHHHHTT-CCCEEE----ESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhhCCCc-EEEEecCCcCCCccCCCchHHHHHHHHHhcc-CCcEEE----ECCCCCHHHHHHHHHcCCCEEEE
Confidence 66655443211 223344567787544 45678899999887 788887 67877444 55559999998743
No 132
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.36 E-value=0.0008 Score=73.13 Aligned_cols=175 Identities=15% Similarity=0.104 Sum_probs=118.2
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
.+.++-+++++.+.. |++.||.|-+-. +... .+.++.+|+..++.++-.-+- + . +..+.
T Consensus 10 ~~~~~~~~~~~~~~~---~~diie~G~p~~-------~~~g-~~~i~~ir~~~~~~~i~~~~~------~---~-~~~~~ 68 (211)
T 3f4w_A 10 LTLPEAMVFMDKVVD---DVDIIEVGTPFL-------IREG-VNAIKAIKEKYPHKEVLADAK------I---M-DGGHF 68 (211)
T ss_dssp CCHHHHHHHHHHHGG---GCSEEEECHHHH-------HHHT-THHHHHHHHHCTTSEEEEEEE------E---C-SCHHH
T ss_pred CCHHHHHHHHHHhhc---CccEEEeCcHHH-------Hhcc-HHHHHHHHHhCCCCEEEEEEE------e---c-cchHH
Confidence 456788899998853 899999874210 2222 467889999888887632110 0 1 11345
Q ss_pred HHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q psy15244 758 FCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVL 837 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i 837 (1427)
|++.+.++|+|.+.+.+.. ..+.+...++.+++.|. .+... +.+| .+ ..+.++.+.++|+|.|
T Consensus 69 ~~~~~~~~Gad~v~v~~~~-~~~~~~~~~~~~~~~g~---~~~v~------~~~~----~t---~~~~~~~~~~~g~d~i 131 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVT-DVLTIQSCIRAAKEAGK---QVVVD------MICV----DD---LPARVRLLEEAGADML 131 (211)
T ss_dssp HHHHHHHTTCSEEEEETTS-CHHHHHHHHHHHHHHTC---EEEEE------CTTC----SS---HHHHHHHHHHHTCCEE
T ss_pred HHHHHHhcCCCEEEEeCCC-ChhHHHHHHHHHHHcCC---eEEEE------ecCC----CC---HHHHHHHHHHcCCCEE
Confidence 7999999999999987654 34677889999999998 44321 2233 22 3466778888999998
Q ss_pred EEccccCc---CCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 838 CLKDMAGL---LKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 838 ~i~Dt~G~---l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
++- .|. ..+....+.++.+++.+|++||.. +.|....|...++++|||.|=+.
T Consensus 132 ~v~--~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~----~gGI~~~~~~~~~~~Gad~vvvG 187 (211)
T 3f4w_A 132 AVH--TGTDQQAAGRKPIDDLITMLKVRRKARIAV----AGGISSQTVKDYALLGPDVVIVG 187 (211)
T ss_dssp EEE--CCHHHHHTTCCSHHHHHHHHHHCSSCEEEE----ESSCCTTTHHHHHTTCCSEEEEC
T ss_pred EEc--CCCcccccCCCCHHHHHHHHHHcCCCcEEE----ECCCCHHHHHHHHHcCCCEEEEC
Confidence 873 221 111123567888888877888866 45666678888999999987543
No 133
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=97.32 E-value=0.00014 Score=75.75 Aligned_cols=70 Identities=20% Similarity=0.359 Sum_probs=60.8
Q ss_pred CCCCCCceecCCCeEEEEEEecCCCEEec----CCEEEEEEcCCceeeeecCCCeEEEEE--------------------
Q psy15244 1353 DSDTAGEIGAPMPGNIIEVKVKVGQQVKK----NDVLIVMSVMKTETLIHASADGVVKEI-------------------- 1408 (1427)
Q Consensus 1353 ~~~~~~~V~APm~G~v~~v~V~~Gd~V~~----G~~l~~ieamKme~~i~Ap~~G~V~~i-------------------- 1408 (1427)
++.++..|.||+.|+|+.+ .+..|.|-. |+.+++... +..++||++|+|..+
T Consensus 8 ~p~~~~~i~aP~~G~vv~l-~~v~D~vfs~~~~G~Giai~p~---~~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiH 83 (162)
T 1ax3_A 8 NEIGEEVFVSPITGEIHPI-TDVPDQVFSGKMMGDGFAILPS---EGIVVSPVRGKILNVFPTKHAIGLQSDGGREILIH 83 (162)
T ss_dssp CTTCCSSCCCCCSEEEEEG-GGSSSHHHHTCTTSEEEEEEEC---SSEEEESCCEEEEECCSSSSEEEEESSSSCEEEEE
T ss_pred CCCCCCEEEecCceEEEEe-EECCCccccccceeceEEEEeC---CCcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEE
Confidence 3445667999999999998 777888777 899998887 678999999999988
Q ss_pred ---------------EecCCCeeCCCCEEEEEe
Q psy15244 1409 ---------------FVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1409 ---------------~v~~G~~V~~g~~L~~i~ 1426 (1427)
+|++||.|.+||+|+++.
T Consensus 84 IGidTV~l~G~gF~~~V~~Gd~V~~G~~L~~~d 116 (162)
T 1ax3_A 84 FGIDTVSLKGEGFTSFVSEGDRVEPGQKLLEVD 116 (162)
T ss_dssp CSSSTTTTTTTTEEESCCCCSEECSEEEEEEEC
T ss_pred ECccchhcCCCccEEEEeCCCEEcCCCEEEEEC
Confidence 899999999999999875
No 134
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=97.30 E-value=6.9e-05 Score=88.96 Aligned_cols=70 Identities=19% Similarity=0.242 Sum_probs=61.2
Q ss_pred CCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCC-------------------------------------------
Q psy15244 1356 TAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMK------------------------------------------- 1392 (1427)
Q Consensus 1356 ~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamK------------------------------------------- 1392 (1427)
....|.++.+|.|.+++|++||.|++||+|+.|+.-.
T Consensus 42 ~~~~v~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~~~~~R~~~L~~~g~is~~~~~~a~~~~ 121 (369)
T 1vf7_A 42 RIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAY 121 (369)
T ss_dssp CEEEECCSSCEEEEECCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred eEEEEEeeCceEEEEEEcCCCCEEcCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHH
Confidence 3457899999999999999999999999999997531
Q ss_pred --------------ceeeeecCCCeEEEEEEecCCCeeCCC--CEEEEE
Q psy15244 1393 --------------TETLIHASADGVVKEIFVEVGGQVAQN--DLVVVL 1425 (1427)
Q Consensus 1393 --------------me~~i~Ap~~G~V~~i~v~~G~~V~~g--~~L~~i 1425 (1427)
-.+.|+||++|+|.++.+++|+.|..| ++|+.|
T Consensus 122 ~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~~v~~G~~V~~g~g~~l~~i 170 (369)
T 1vf7_A 122 LQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATV 170 (369)
T ss_dssp HHHHHHHHHHHHHHHTTEEECSSSEEECCCSSCBTCEECTTCSSCSEEE
T ss_pred HHHHHHHHHHHHhhcCCEEECCCCeEEEEEEcCCCCeEcCCCCceeEEE
Confidence 125899999999999999999999995 788876
No 135
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=97.28 E-value=0.00024 Score=71.91 Aligned_cols=52 Identities=23% Similarity=0.353 Sum_probs=45.0
Q ss_pred CCCeEEEEEEe-cCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCC
Q psy15244 1363 PMPGNIIEVKV-KVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGG 1414 (1427)
Q Consensus 1363 Pm~G~v~~v~V-~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~ 1414 (1427)
..-|.|+-|.. ++|+.|++||++++||+||+..+|.||++|+|.+++-+..+
T Consensus 51 ~~LGdIvfVelP~vG~~v~~Gd~~~~VES~Ka~sdi~sPvsG~VvevN~~L~d 103 (143)
T 3mxu_A 51 EQLGDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAALAE 103 (143)
T ss_dssp HHHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGT
T ss_pred hhcCCeEEEEcCCCCCEeeCCCEEEEEEecceeeeeecCcceEEEEEhhhhhh
Confidence 34577877766 79999999999999999999999999999999998765544
No 136
>3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum}
Probab=97.24 E-value=0.0002 Score=72.18 Aligned_cols=48 Identities=23% Similarity=0.294 Sum_probs=43.0
Q ss_pred CCCeEEEEEEe-cCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEe
Q psy15244 1363 PMPGNIIEVKV-KVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFV 1410 (1427)
Q Consensus 1363 Pm~G~v~~v~V-~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v 1410 (1427)
..-|.|+-|.. +.|++|++|+++++||+||+..+|.||++|+|.+++-
T Consensus 46 ~~lGdiv~VelP~vG~~v~~G~~~~~VES~K~~sdi~sPvsG~VvevN~ 94 (137)
T 3tzu_A 46 EALGDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVNT 94 (137)
T ss_dssp HHHCSEEEEECCCTTCEECTTSEEEEEEESSEEEEEECSEEEEEEEECH
T ss_pred hhcCCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEehh
Confidence 45678877766 7999999999999999999999999999999999864
No 137
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=97.23 E-value=0.00022 Score=73.71 Aligned_cols=66 Identities=27% Similarity=0.358 Sum_probs=57.9
Q ss_pred CCceecCCCeEEEEEEecCCCEEec----CCEEEEEEcCCceeeeecCCCeEEEE-------------------------
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKK----NDVLIVMSVMKTETLIHASADGVVKE------------------------- 1407 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~----G~~l~~ieamKme~~i~Ap~~G~V~~------------------------- 1407 (1427)
+..|.||++|+|+.+. +..|.|-+ |+.+++..+ +..++||++|+|..
T Consensus 7 ~~~i~aP~~G~vv~l~-~v~D~vf~~~~~G~Giai~p~---~~~v~AP~~G~V~~v~~t~HAigi~~~~G~evLiHiGid 82 (154)
T 2gpr_A 7 NLKVLAPCDGTIITLD-EVEDEVFKERMLGDGFAINPK---SNDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILLHIGLD 82 (154)
T ss_dssp CEEEECSSSEEEECGG-GSSCHHHHTTSSCEEEEEEES---SSEEECSSCEEEEECCTTCSEEEEECTTSCEEEEECSSS
T ss_pred CCEEEecCCeEEEEee-ECCCccccccceeCeEEEEeC---CCcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECcc
Confidence 4679999999999885 77888777 899998887 36899999999998
Q ss_pred ----------EEecCCCeeCCCCEEEEEe
Q psy15244 1408 ----------IFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1408 ----------i~v~~G~~V~~g~~L~~i~ 1426 (1427)
++|++||.|++||+|+++.
T Consensus 83 Tv~l~G~gF~~~V~~Gd~V~~G~~L~~~d 111 (154)
T 2gpr_A 83 TVSLDGNGFESFVTQDQEVNAGDKLVTVD 111 (154)
T ss_dssp GGGGTTCSEEECCCTTCEECTTCEEEEEC
T ss_pred hhhcCCCceEEEEcCCCEEcCCCEEEEEC
Confidence 4899999999999999875
No 138
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=97.13 E-value=0.00033 Score=72.81 Aligned_cols=65 Identities=29% Similarity=0.423 Sum_probs=57.5
Q ss_pred CceecCCCeEEEEEEecCCCEEec----CCEEEEEEcCCceeeeecCCCeEEEEE-------------------------
Q psy15244 1358 GEIGAPMPGNIIEVKVKVGQQVKK----NDVLIVMSVMKTETLIHASADGVVKEI------------------------- 1408 (1427)
Q Consensus 1358 ~~V~APm~G~v~~v~V~~Gd~V~~----G~~l~~ieamKme~~i~Ap~~G~V~~i------------------------- 1408 (1427)
..|.||++|+|+.+. +..|.|-. |+.+++.... ..++||++|+|..+
T Consensus 13 ~~i~aP~~G~vv~l~-~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidT 88 (161)
T 1f3z_A 13 IEIIAPLSGEIVNIE-DVPDVVFAEKIVGDGIAIKPTG---NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDT 88 (161)
T ss_dssp EEEECSSCEEEEEGG-GSSSHHHHTTSSCEEEEEEECS---SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSG
T ss_pred cEEEecCCeEEEEeE-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccc
Confidence 469999999999986 77888777 8999988874 68999999999998
Q ss_pred ----------EecCCCeeCCCCEEEEEe
Q psy15244 1409 ----------FVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1409 ----------~v~~G~~V~~g~~L~~i~ 1426 (1427)
+|++||.|.+||+|+++.
T Consensus 89 V~l~G~gF~~~V~~Gd~V~~G~~L~~~d 116 (161)
T 1f3z_A 89 VELKGEGFKRIAEEGQRVKVGDTVIEFD 116 (161)
T ss_dssp GGGTTTTEEECSCTTCEECTTCEEEEEC
T ss_pred hhcCCCccEEEEeCcCEECCCCEEEEEC
Confidence 899999999999999875
No 139
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=96.98 E-value=0.029 Score=65.70 Aligned_cols=215 Identities=13% Similarity=0.104 Sum_probs=142.7
Q ss_pred cccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhcc--ccChHHHHHHHHHhCCCCceeeeecccccccccCCCcc
Q psy15244 676 TRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFL--KECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPA 753 (1427)
Q Consensus 676 ~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl--~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~n 753 (1427)
.+++.+++++.++.+.+ .|+..|-+.||.... +. .+.-.+-++.+++..+ ..+. +. +..
T Consensus 89 ~~ls~eei~~~~~~~~~--~G~~~i~l~gGe~p~----~~~~~~~~~~l~~~ik~~~~-i~i~--~s----------~g~ 149 (350)
T 3t7v_A 89 YRLTMEEIKETCKTLKG--AGFHMVDLTMGEDPY----YYEDPNRFVELVQIVKEELG-LPIM--IS----------PGL 149 (350)
T ss_dssp CBCCHHHHHHHHHHHTT--SCCSEEEEEECCCHH----HHHSTHHHHHHHHHHHHHHC-SCEE--EE----------CSS
T ss_pred eeCCHHHHHHHHHHHHH--CCCCEEEEeeCCCCc----cccCHHHHHHHHHHHHhhcC-ceEE--Ee----------CCC
Confidence 45899999999998877 799988776654211 10 0111334455555432 2221 21 122
Q ss_pred hHHHHHHHHHhcCCCEEEEeccCC------------hHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHH
Q psy15244 754 EVGAFCRLASQAGIDIFRVFDPLN------------SVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNY 821 (1427)
Q Consensus 754 vv~~~v~~a~~~Gid~~rif~~~n------------d~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~ 821 (1427)
+..+.+++.+++|++.+.+..-.. +.+....+++.+++.|. .+...+.+. - .-+.+.
T Consensus 150 ~~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi---~v~~~~i~G----l----get~e~ 218 (350)
T 3t7v_A 150 MDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGY---CVEDGILTG----V----GNDIES 218 (350)
T ss_dssp CCHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTC---EEEEEEEES----S----SCCHHH
T ss_pred CCHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCC---eEccceEee----c----CCCHHH
Confidence 345668888899999877533222 23466788999999999 777766665 1 257888
Q ss_pred HHHHHHHHHHCCCCEEEEc------ccc----CcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCC
Q psy15244 822 YEDLAKQLVESGAQVLCLK------DMA----GLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGAD 891 (1427)
Q Consensus 822 ~~~~a~~l~~~Gad~i~i~------Dt~----G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad 891 (1427)
+.+.++.+.+.+++.+.+- +|- .-.++.+..+++...|-.+|++.|-.-++ ..+......|+.+||+
T Consensus 219 ~~~~l~~l~~l~~~~v~~~~f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp~~~I~a~~~---~~g~~~~~~~l~~Gan 295 (350)
T 3t7v_A 219 TILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPASLD---LEGIDGMVLRLNAGAN 295 (350)
T ss_dssp HHHHHHHHHHTCCSEEEEEECCCCTTSTTTTCCCCCCCCHHHHHHHHHHHSTTSBCEEEHH---HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCEEEecceeeCCCCcCccCCCCChHHHHHHHHHHHHhCCCcCcccccc---ccChhHHHHHHhcCCc
Confidence 9999999999999977652 331 12455678888888888888654443222 3344567899999999
Q ss_pred EEEeccccC----CCCC-------CCCcHHHHHHHHHhCCCCC
Q psy15244 892 IVDVAADSM----SGIC-------SQPAMGTIVSCLENTDKRC 923 (1427)
Q Consensus 892 ~VD~av~Gm----G~~t-------gn~~lE~vv~~L~~~g~~t 923 (1427)
.+..++..- |-.. ++.+.++++..++..|+.+
T Consensus 296 ~~~~~~~~~~~~ag~~~~~~~~~~~~~~~~~~~~~i~~~G~~~ 338 (350)
T 3t7v_A 296 IVTSILPPDSQLEGVANYDRDLEERDRDIKSVVRRLEIMGMKP 338 (350)
T ss_dssp EEEEECCSSCCCCCSSCTTTTCSSCCCCHHHHHHHHHHHTCEE
T ss_pred eecCCCCCCCCCCCCCCCcccchhccCCHHHHHHHHHHcCCcc
Confidence 999998776 2221 2468899999999888764
No 140
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=96.93 E-value=5.4e-05 Score=89.61 Aligned_cols=66 Identities=35% Similarity=0.453 Sum_probs=58.8
Q ss_pred CCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCC-------------------------------------------
Q psy15244 1356 TAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMK------------------------------------------- 1392 (1427)
Q Consensus 1356 ~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamK------------------------------------------- 1392 (1427)
+...|.+|.+|.|.+++|++||.|++||+|+.|+.-.
T Consensus 31 ~~~~v~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~ 110 (369)
T 4dk0_A 31 NTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQK 110 (369)
T ss_dssp SCCCBCCCSCSBCCEECCCTTSCCCSSCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSS
T ss_pred eeEEEecCCCcEEEEEEECCCCEECCCCEEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4668999999999999999999999999999997631
Q ss_pred ------------------------------------------ceeeeecCCCeEEEEEEecCCCeeCCCCE
Q psy15244 1393 ------------------------------------------TETLIHASADGVVKEIFVEVGGQVAQNDL 1421 (1427)
Q Consensus 1393 ------------------------------------------me~~i~Ap~~G~V~~i~v~~G~~V~~g~~ 1421 (1427)
-.+.|+||++|+|.++.+++|+.|..|+.
T Consensus 111 ~~s~~~~~~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~ 181 (369)
T 4dk0_A 111 ATSLDTLNTAKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYTKITSPIDGTVISTPVSEGQTVNSNQT 181 (369)
T ss_dssp CSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCSCCSCCCBCCCCTTCBCCTTTS
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEEeeCCCCCCccCCCC
Confidence 11359999999999999999999999987
No 141
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=96.91 E-value=0.0018 Score=76.35 Aligned_cols=67 Identities=22% Similarity=0.252 Sum_probs=59.0
Q ss_pred CCceecCCCeEEEEEEecCCCEEecCCEEEEEEcC----CceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVM----KTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieam----Kme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
..-+.||..| +++..|+.||.|++||+|+.++.| +++.+|.||.+|+|..+ .....|..||.|+.|.
T Consensus 267 ~~~v~A~~~G-~~~~~~~~g~~V~~G~~La~i~d~~~~g~~~~~v~Ap~dG~v~~~--~~~~~V~~Gd~l~~ia 337 (354)
T 3cdx_A 267 DAYVMAPRTG-LFEPTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFG--AGPGRVTRGDAVAVVM 337 (354)
T ss_dssp GGEEECSSCE-EEEESCCTTCEECTTSEEEEEECTTSSSCCCEEEECCSCEEEEEE--ECSSEECTTCEEEEEE
T ss_pred cEEEECCCCE-EEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEcCCCeEEEEE--eCCCccCCCCEEEEEe
Confidence 3457899999 788889999999999999999996 79999999999999755 4788999999999764
No 142
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=96.85 E-value=0.0051 Score=73.19 Aligned_cols=267 Identities=18% Similarity=0.187 Sum_probs=127.0
Q ss_pred CCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHH
Q psy15244 749 NYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQ 828 (1427)
Q Consensus 749 ~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~ 828 (1427)
.++.+...+.++...+.|++.+-+-.+.+ .+.+..+++.+++.+. ..... .+. |...+. ++.
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~-~~~~~~~~~~i~~~~~---~~~v~-~~~---------r~~~~d----i~~ 82 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVA-SPQSRKDAEVLASLGL---KAKVV-THI---------QCRLDA----AKV 82 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTS-CHHHHHHHHHHHTSCC---SSEEE-EEE---------ESCHHH----HHH
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCCcC-CHHHHHHHHHHHhcCC---CcEEE-EEc---------ccChhh----HHH
Confidence 45555566677777788888888855443 3445566666666655 21111 111 222322 355
Q ss_pred HHHCCCCEEEEccccCc-------CCH----HHHHHHHHHHHHHcCCceEEEeecCCcch----HHHHHHHHHHhcCCEE
Q psy15244 829 LVESGAQVLCLKDMAGL-------LKP----TAAKLLIGSFREKYPNILIHVHTHDMAGT----GVATTLACVKAGADIV 893 (1427)
Q Consensus 829 l~~~Gad~i~i~Dt~G~-------l~P----~~~~~lv~~lr~~~p~ipi~~H~Hnd~Gl----A~An~laAi~AGad~V 893 (1427)
+.++|++.|.+.+.+-- .++ +.+.+.|+.+|+.-+.+.+.+.+=+-+.. .+..+-++.++ |+.|
T Consensus 83 a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i 161 (382)
T 2ztj_A 83 AVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRV 161 (382)
T ss_dssp HHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEE
T ss_pred HHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEE
Confidence 55677777777654332 122 23555566666553235666655443321 23334455566 7765
Q ss_pred EeccccCCCCCCCC-cHHHHHHHHHhC---CCCCCCChh--hHHHHHHHHHH-HhCCCC-----------CCCCc---c-
Q psy15244 894 DVAADSMSGICSQP-AMGTIVSCLENT---DKRCGIDLH--DVCDYSSYWRK-VRELYA-----------PAHNL---L- 951 (1427)
Q Consensus 894 D~av~GmG~~tgn~-~lE~vv~~L~~~---g~~tgidl~--~L~~l~~~v~~-~~g~~~-----------~~~kp---i- 951 (1427)
..+ -+-|. ..| ...+++..|+.. +...++..+ .=..+++.++- ..|... .-|-+ +
T Consensus 162 ~l~--DT~G~-~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGeraGN~~lE~vv 238 (382)
T 2ztj_A 162 GLA--DTVGV-ATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGIGERNGITPLGGFL 238 (382)
T ss_dssp EEE--ETTSC-CCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHH
T ss_pred Eec--CCCCC-CCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEccccccccccchhHHHHH
Confidence 432 11111 123 234555555432 111111100 00011111111 122211 00111 0
Q ss_pred ----------cccchhhhhHHHHHHHHHHhhhhcCCCCCCCCCcCcccEEEecC---CCccHHHHHHHHHHCCCCHHHHH
Q psy15244 952 ----------WRCGIDLHDVCDYSSYWRKVRELYAPFECTDLKAASSEAYLYEI---PGGQYTNLKFRTMSFGLDFEDVK 1018 (1427)
Q Consensus 952 ----------vG~~~f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~~~v~~~~~---pGg~~snl~~ql~~~gl~~~ev~ 1018 (1427)
+-.++....+...++++.+....+-|+. ..++|. .++.|+. ++|++.|.
T Consensus 239 ~~L~~~~~~g~~t~idl~~L~~~s~~v~~~~~~~~~~~-~p~vG~--~~f~h~sGiH~~g~~k~~--------------- 300 (382)
T 2ztj_A 239 ARMYTLQPEYVRRKYKLEMLPELDRMVARMVGVEIPFN-NYITGE--TAFSHKAGMHLKAIYINP--------------- 300 (382)
T ss_dssp HHHHHHCHHHHHHHSCGGGHHHHHHHHHHHHTCCCCTT-CTTTST--TTTEECCHHHHHHHHHCG---------------
T ss_pred HHHHhhcCCcccCCCCHHHHHHHHHHHHHHhCCCCCcC-CCcCCc--chhheecccCCchhhcCh---------------
Confidence 1123445677788999999998888887 556664 5677777 88887663
Q ss_pred HHHHHHH-HHcCCCCccccchhhHHHHHHHHHHcCCCh
Q psy15244 1019 RAYRTAN-FLLGDIIKCTPSSKVVADLAIFMTQEKLSY 1055 (1427)
Q Consensus 1019 ~~~~~v~-~~lG~~~~vTP~sq~vg~~a~~~v~~~~~~ 1055 (1427)
+.|..++ +++|++.+|+|+||++|.+|++++...+.+
T Consensus 301 ~~Ye~~~P~~vG~~~~v~~~s~~sG~~av~~~l~~~g~ 338 (382)
T 2ztj_A 301 EAYEPYPPEVFGVKRKLIIASRLTGRHAIKARAEELGL 338 (382)
T ss_dssp GGGCSSCGGGGTCCCEECCC------------------
T ss_pred hhhcccCHHHcCCccEEEecccchhHHHHHHHHHHhCC
Confidence 1333333 789999999999999999999988776554
No 143
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=96.58 E-value=0.0022 Score=65.74 Aligned_cols=47 Identities=19% Similarity=0.278 Sum_probs=41.3
Q ss_pred CCeEEEEEEe-cCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEe
Q psy15244 1364 MPGNIIEVKV-KVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFV 1410 (1427)
Q Consensus 1364 m~G~v~~v~V-~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v 1410 (1427)
.-|.|+-|.. ++|+.|++|+++++||++|.-.+|.||++|+|.+++-
T Consensus 57 ~LGdIvfVeLP~vG~~v~~Gd~~~~VESvKa~sdi~sPvsG~VvevN~ 104 (155)
T 3hgb_A 57 ALGDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVNS 104 (155)
T ss_dssp HHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECT
T ss_pred hcCCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEEhh
Confidence 3466776655 7899999999999999999999999999999998863
No 144
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=96.55 E-value=0.0055 Score=71.45 Aligned_cols=69 Identities=17% Similarity=0.272 Sum_probs=58.4
Q ss_pred CCCCceecCCCeEEEEEEecCCCEEecCCEEEEEEcC----CceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1355 DTAGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVM----KTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1355 ~~~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieam----Kme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
....-|.||..| ++...|+.||.|++||+|+.|..+ ..+.+|+||.+|+|.... ..-.|..|+.|+.|-
T Consensus 255 ~~~~~v~A~~~G-l~~~~v~~Gd~V~~G~~la~I~dp~~~g~~~~~v~Ap~dGiVi~~~--~~~~V~~G~~l~~Ia 327 (331)
T 3na6_A 255 DGDCYLFSEHDG-LFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRH--FPGMIKSGDCAAVIG 327 (331)
T ss_dssp CSCCCEECSSCE-EEEESSCTTCEECTTCEEEEEECSSCSSCCCEEEECSSSEEEEEEE--CSSEECTTCEEEEEE
T ss_pred CCcEEEeCCCCe-EEEEcCCCCCEEcCCCEEEEEEcCccCCCeeEEEEcCCCEEEEEEe--CCCccCCCCEEEEEe
Confidence 345678999999 667789999999999999999997 467899999999997654 457888999998773
No 145
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.39 E-value=0.0013 Score=63.14 Aligned_cols=45 Identities=18% Similarity=0.270 Sum_probs=41.9
Q ss_pred CCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1382 NDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1382 G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
|..++.+|+|+....|.||.+|+|.++++++||.|++||+|++++
T Consensus 5 ~g~~~~~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le 49 (100)
T 2dn8_A 5 SSGTCVFEKENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEME 49 (100)
T ss_dssp CCCCCCCCCCCCTTEEECSSCEEEEEESSCTTEEECTTCEEEEEE
T ss_pred CCEEEEEEcCCCCcEEeCCCCEEEEEEEcCCcCEECCCCEEEEEE
Confidence 455688999999999999999999999999999999999999987
No 146
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=96.38 E-value=0.007 Score=53.90 Aligned_cols=68 Identities=26% Similarity=0.304 Sum_probs=50.2
Q ss_pred ccCCCCCcceeeeeecCCcceEEEeecccccccCCceEEEEEECCEEeEechhhhhhhhccccCCCCCCCceecCCCeEE
Q psy15244 1289 LNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGQLRSLDKNKAKKLKLRSKADSDTAGEIGAPMPGNI 1368 (1427)
Q Consensus 1289 v~~~~~g~~~~~~v~~Gd~~~~~~~~i~~~~~~~g~r~v~~elnG~~~~vd~~~~~~~~~~~~a~~~~~~~V~APm~G~v 1368 (1427)
+.+++.|...+|.++.|+.+ .. |..-..++-. .....|.||+.|+|
T Consensus 2 v~a~~~G~v~~~~v~~G~~V-----------~~-G~~l~~i~~~----------------------~~~~~i~ap~~G~v 47 (72)
T 1z6h_A 2 VSIQMAGNLWKVHVKAGDQI-----------EK-GQEVAILESM----------------------KMEIPIVADRSGIV 47 (72)
T ss_dssp EECCSSEEEEEECCCTTCEE-----------CT-TCEEEEEEET----------------------TEEEEEECSSCEEE
T ss_pred EECcccEEEEEEEcCCcCEE-----------CC-CCEEEEEECC----------------------ccEEEEECCCCcEE
Confidence 45677888888888888876 22 3222222211 02357999999999
Q ss_pred EEEEecCCCEEecCCEEEEEEc
Q psy15244 1369 IEVKVKVGQQVKKNDVLIVMSV 1390 (1427)
Q Consensus 1369 ~~v~V~~Gd~V~~G~~l~~iea 1390 (1427)
.++.+++|+.|++|++|+.|..
T Consensus 48 ~~~~v~~G~~V~~G~~l~~i~~ 69 (72)
T 1z6h_A 48 KEVKKKEGDFVNEGDVLLELSN 69 (72)
T ss_dssp EEESSCTTCEECTTCEEEEEGG
T ss_pred EEEecCCCCEECCCCEEEEEeC
Confidence 9999999999999999999865
No 147
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=96.35 E-value=0.0041 Score=74.64 Aligned_cols=109 Identities=13% Similarity=0.043 Sum_probs=77.7
Q ss_pred HHHHHHHHHhCCC---C-CCC--Ccc-ccCCCHHHHHHHHHhcC-CcEEEeecCCCCC----cCeEEecCHHHHHHHHHH
Q psy15244 172 KVLARDAALKADV---P-IIP--GTT-EPVTDVDKVKEFCDEVE-FPVILKAAFGGGG----RGMRMVANKDAIEENFKR 239 (1427)
Q Consensus 172 K~~~r~~a~~aGV---p-vp~--~~~-~~v~s~eea~~~a~~iG-yPvVVKP~~GgGG----rGV~iV~s~eeL~~a~~~ 239 (1427)
-+..|+++.++++ | +.+ +.. ....|.+++.+.++.+| ||+|+|+..-.|| -||+++.|++|+.+++.+
T Consensus 8 Ey~~K~ll~~~~~~~~~~~~~~~~~~~~~~~~~~eA~~~a~~lg~~pvVvKaqv~~ggRgk~GGV~l~~s~eev~~aa~~ 87 (425)
T 3mwd_A 8 EQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKP 87 (425)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCGGGGTSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHHTT
T ss_pred HHHHHHHHHHhccccCCccCCcceEEeCCCCCHHHHHHHHHHhCCCCEEEEeccccCCCCcCCeEEEECCHHHHHHHHHH
Confidence 3578889999998 4 222 321 12346699999999998 9999999763333 389999999999998876
Q ss_pred HHHHHHHcc----CCCcEEEEeeccC--CceEEEEEEecccccEEEe
Q psy15244 240 AQSEALASF----GKDDMLVEKYIDR--PRHIEVQILGDKYGDVVHL 280 (1427)
Q Consensus 240 a~~ea~~~f----g~~~vlVEeyIeg--greieVqvl~Dg~G~vv~l 280 (1427)
......... .-..++||++++. ++|+-+.+..|..|.++.+
T Consensus 88 ml~~~~~~~~~~~~v~~vlVe~~~~~~~~~E~ylgi~~Dr~gpvI~~ 134 (425)
T 3mwd_A 88 RLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF 134 (425)
T ss_dssp TTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEE
T ss_pred HHhhhhhccCCCceEEEEEEEecccCCCCceEEEEEEecCCCCEEEE
Confidence 543221100 0245999999975 4899999999988776654
No 148
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=96.11 E-value=0.032 Score=62.67 Aligned_cols=182 Identities=12% Similarity=0.017 Sum_probs=110.1
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCc---hhh------hhhccc--cCh---HHHHHHHHHhCCCCceeeeecccc
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAV---SHT------CLKFLK--ECP---WERLAELRELIPNIPFQMILRGNS 743 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggat---fd~------~~rfl~--e~p---~erl~~lr~~~p~~~~qml~Rg~n 743 (1427)
.+.++..++++.+.+ .|++.||++.+.. .|. +.+-+. -++ ++.++.+|+. .++++-.+.+
T Consensus 29 ~~~~~~~~~~~~l~~--~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~--- 102 (262)
T 1rd5_A 29 PDLATTAEALRLLDG--CGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSY--- 102 (262)
T ss_dssp SCHHHHHHHHHHHHH--TTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECC---
T ss_pred CCHHHHHHHHHHHHH--cCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEec---
Confidence 345789999999998 7999999975432 010 000000 011 3556677765 5666544321
Q ss_pred cccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHH
Q psy15244 744 LVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYE 823 (1427)
Q Consensus 744 ~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~ 823 (1427)
.+-+....++.+.++|+|.+.+.+... +.+...++.+++.|. ..... . +| ..+.+.+.
T Consensus 103 -------~~~~~~~~~~~a~~aGadgv~v~d~~~--~~~~~~~~~~~~~g~---~~i~~---~----a~---~t~~e~~~ 160 (262)
T 1rd5_A 103 -------YKPIMFRSLAKMKEAGVHGLIVPDLPY--VAAHSLWSEAKNNNL---ELVLL---T----TP---AIPEDRMK 160 (262)
T ss_dssp -------SHHHHSCCTHHHHHTTCCEEECTTCBT--TTHHHHHHHHHHTTC---EECEE---E----CT---TSCHHHHH
T ss_pred -------CcHHHHHHHHHHHHcCCCEEEEcCCCh--hhHHHHHHHHHHcCC---ceEEE---E----CC---CCCHHHHH
Confidence 111111124458899999988876443 457788888999998 32211 1 33 24444443
Q ss_pred HHHHHHHHCCCCEEEE---ccccCc--CCHHHHHHHHHHHHHHcCCceEEEeecCCcchH-HHHHHHHHHhcCCEEEec
Q psy15244 824 DLAKQLVESGAQVLCL---KDMAGL--LKPTAAKLLIGSFREKYPNILIHVHTHDMAGTG-VATTLACVKAGADIVDVA 896 (1427)
Q Consensus 824 ~~a~~l~~~Gad~i~i---~Dt~G~--l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA-~An~laAi~AGad~VD~a 896 (1427)
.++ +.+.+.+++ ..+.|. ..+....++++.+++.. ++||.+ ..|.. ..|+.+++++|||.|-+.
T Consensus 161 ~~~----~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~-~~pI~v----gGGI~~~e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 161 EIT----KASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVT-NKPVAV----GFGISKPEHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHH----HHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHC-SSCEEE----ESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHH----hcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhc-CCeEEE----ECCcCCHHHHHHHHHcCCCEEEEC
Confidence 333 334443433 333555 23455778999999887 888887 77888 677778888999988643
No 149
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=96.08 E-value=0.01 Score=70.09 Aligned_cols=65 Identities=25% Similarity=0.256 Sum_probs=55.8
Q ss_pred CceecCCCeEEEEEEecCCCEEecCCEEEEEEc------CCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEE
Q psy15244 1358 GEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSV------MKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVL 1425 (1427)
Q Consensus 1358 ~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~iea------mKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i 1425 (1427)
.-|.||..| ++...|+.||.|++||+|+.|.. -....+|+||.+|+|.. ....-.|..|+.|+.|
T Consensus 291 ~~v~A~~~G-l~~~~v~lGd~V~kG~~la~I~d~~~~g~g~~~~~v~Ap~dGiVi~--~~~~p~V~~G~~l~~i 361 (368)
T 3fmc_A 291 RKFHAPKAG-MVEYLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVPIL--HFASASVHQGTELYKV 361 (368)
T ss_dssp EEEECSSCE-EEEECSCTTCCBCTTCEEEEEECGGGTTSSCSEEEEECSSSEEEEE--ECSSSEECTTCEEEEE
T ss_pred EEEecCCCE-EEEEeCCCCCEeCCCCEEEEEEcCCCCCCCCeeEEEEcCCCEEEEE--EeCCCccCCCCEEEEE
Confidence 458999999 66799999999999999999998 34678999999999964 4566889999999876
No 150
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=96.02 E-value=0.69 Score=52.33 Aligned_cols=236 Identities=16% Similarity=0.158 Sum_probs=158.8
Q ss_pred CCCeEEeecCcccCCCCCCCccc---CHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhcccc-----ChHHHHHHHH
Q psy15244 656 LKHILLTDTTFRDAHQSLLATRV---RTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKE-----CPWERLAELR 727 (1427)
Q Consensus 656 ~~~v~i~DtTlRDG~Qsl~a~r~---~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e-----~p~erl~~lr 727 (1427)
++.|.|-++++-.|.-. ..+.+ +.++++..++.+.. .|.+.+|.- .| ++.+ +-.+.++.+|
T Consensus 25 m~~v~v~~~~~g~g~p~-i~v~l~~~~~~e~~~~~~~~~~--~gaD~VElR----vD----~l~~~~~~~~v~~~l~~lr 93 (276)
T 3o1n_A 25 MKTVTVRDLVVGEGAPK-IIVSLMGKTITDVKSEALAYRE--ADFDILEWR----VD----HFANVTTAESVLEAAGAIR 93 (276)
T ss_dssp CCCEEETTEEETSSSCE-EEEEECCSSHHHHHHHHHHHTT--SCCSEEEEE----GG----GCTTTTCHHHHHHHHHHHH
T ss_pred ceEEEECCEEeCCCCcE-EEEEeCCCCHHHHHHHHHHHhh--CCCCEEEEE----ec----cccccCcHHHHHHHHHHHH
Confidence 35688888888888542 23344 34555555555554 699999962 12 2221 2235567788
Q ss_pred HhCCCCceeeeecccccccccCCCcchHHHHHHHHHhcC-CCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEee
Q psy15244 728 ELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAG-IDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYA 806 (1427)
Q Consensus 728 ~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~G-id~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t 806 (1427)
+..++.|+-.-+|...-=|-....++...+.++.+++.| +|.+-|=....+ +.++..++.+++.|. .+- ++|-
T Consensus 94 ~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~-~~~~~l~~~a~~~~~---kvI--~S~H 167 (276)
T 3o1n_A 94 EIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGD-DEVKATVGYAHQHNV---AVI--MSNH 167 (276)
T ss_dssp HHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGCH-HHHHHHHHHHHHTTC---EEE--EEEE
T ss_pred HhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcCCH-HHHHHHHHHHHhCCC---EEE--EEee
Confidence 888888888878865433444455666778899999999 899888665443 456666777777776 442 3443
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHH---HcCCceEEEeecCCcchHHHHHH
Q psy15244 807 GDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFRE---KYPNILIHVHTHDMAGTGVATTL 883 (1427)
Q Consensus 807 ~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~---~~p~ipi~~H~Hnd~GlA~An~l 883 (1427)
||... -+.+.+.+..+++.+.|||++-|+=|+ -.+.++.+|..+.++ ..++.|+-.- |.-.+|...-+
T Consensus 168 -df~~t----P~~~el~~~~~~~~~~GaDIvKia~~a--~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~--~MG~~G~~SRi 238 (276)
T 3o1n_A 168 -DFHKT----PAAEEIVQRLRKMQELGADIPKIAVMP--QTKADVLTLLTATVEMQERYADRPIITM--SMSKTGVISRL 238 (276)
T ss_dssp -ESSCC----CCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCCSCCEEE--ECSGGGTHHHH
T ss_pred -cCCCC----cCHHHHHHHHHHHHHcCCCEEEEEecC--CChHHHHHHHHHHHHHHhcCCCCCEEEE--ECCCchhhHHH
Confidence 44211 246889999999999999999998665 456677777776543 3457776543 44455556666
Q ss_pred HHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh
Q psy15244 884 ACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN 918 (1427)
Q Consensus 884 aAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~ 918 (1427)
.+--.|--+.-+++ |-.--+||.+.+++-..|+.
T Consensus 239 ~~~~~GS~vTf~~l-~~~sAPGQl~~~~l~~~l~~ 272 (276)
T 3o1n_A 239 AGEVFGSAATFGAV-KKASAPGAISVADLRTVLTI 272 (276)
T ss_dssp CHHHHTCCEEECBS-SCCSSTTCCBHHHHHHHHHH
T ss_pred HHHHhCCceEecCC-CCCCCCCCCCHHHHHHHHHH
Confidence 77778888888887 55667999999998887764
No 151
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=95.86 E-value=0.015 Score=52.97 Aligned_cols=32 Identities=28% Similarity=0.474 Sum_probs=30.0
Q ss_pred CceecCCCeEEEEEEecCCCEEecCCEEEEEE
Q psy15244 1358 GEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMS 1389 (1427)
Q Consensus 1358 ~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ie 1389 (1427)
..|.||+.|+|.++++++|+.|+.|++|+.|+
T Consensus 49 ~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 49 NQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp EEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred EEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 57899999999999999999999999999885
No 152
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=95.76 E-value=0.41 Score=55.65 Aligned_cols=216 Identities=12% Similarity=0.091 Sum_probs=135.4
Q ss_pred cccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccc-cChHHHHHHHHHhCCCCceeeeecccccccccCCCcch
Q psy15244 676 TRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLK-ECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAE 754 (1427)
Q Consensus 676 ~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~-e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nv 754 (1427)
.+++.+++++.++.+.+ .|+..+-+.||... +++ +.-.+-++.+++. +..+. +.. | .+
T Consensus 82 ~~ls~eei~~~i~~~~~--~g~~~i~~~gGe~p-----~~~~~~~~~li~~i~~~--~~~i~--~s~----g------~l 140 (348)
T 3iix_A 82 YRMTPEEIVERARLAVQ--FGAKTIVLQSGEDP-----YXMPDVISDIVKEIKKM--GVAVT--LSL----G------EW 140 (348)
T ss_dssp CBCCHHHHHHHHHHHHH--TTCSEEEEEESCCG-----GGTTHHHHHHHHHHHTT--SCEEE--EEC----C------CC
T ss_pred eeCCHHHHHHHHHHHHH--CCCCEEEEEeCCCC-----CccHHHHHHHHHHHHhc--CceEE--Eec----C------CC
Confidence 35899999999998887 69988888776521 112 1112334444443 22222 221 1 12
Q ss_pred HHHHHHHHHhcCCCEEEEeccCC------------hHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPLN------------SVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYY 822 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~n------------d~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~ 822 (1427)
..+.++...++|++.+.+..-.. +.+....+++.+++.|. .+...+.+. -| ..+.+.+
T Consensus 141 ~~e~l~~L~~ag~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi---~v~~~~i~G----~p---~et~e~~ 210 (348)
T 3iix_A 141 PREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGY---ETGAGSMVG----LP---GQTIDDL 210 (348)
T ss_dssp CHHHHHHHHHHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTC---EEEECBEES----CT---TCCHHHH
T ss_pred CHHHHHHHHHhCCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCC---eeccceEEe----CC---CCCHHHH
Confidence 34567888889999887643322 34567788999999998 665554443 45 3688899
Q ss_pred HHHHHHHHHCCCCEEEE------cccc----CcCCHHHHHHHHHHHHHHcCCceEEEeecCCcch---HHHHHHHHHHhc
Q psy15244 823 EDLAKQLVESGAQVLCL------KDMA----GLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGT---GVATTLACVKAG 889 (1427)
Q Consensus 823 ~~~a~~l~~~Gad~i~i------~Dt~----G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~Gl---A~An~laAi~AG 889 (1427)
.+.++.+.+.|++.+.+ .+|- ....+.+..+++..+|..+|++.|-. +.+. +......|+.+|
T Consensus 211 ~~~~~~l~~l~~~~i~i~~~~p~~gt~l~~~~~~~~~e~~~~~a~~R~~lp~~~i~~----~~~~~~~~~~~~~~~l~~G 286 (348)
T 3iix_A 211 VDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPA----TTAMGTIVPGGREITLRCG 286 (348)
T ss_dssp HHHHHHHHHHTCSEECCEECCCCTTSTTTTSCCCCHHHHHHHHHHHHHHSTTSBCBC----CHHHHHHSTTHHHHHHTTT
T ss_pred HHHHHHHHhcCCCEEeeeeeecCCCCCcccCCCCCHHHHHHHHHHHHHHCCCCCchh----cchhhhcCHHHHHHHHhcC
Confidence 99999999999886553 2331 23456888889999998888753332 2221 112345788999
Q ss_pred CCEEEeccccCCCC------C--------CCCcHHHHHHHHHhCCCCCCCC
Q psy15244 890 ADIVDVAADSMSGI------C--------SQPAMGTIVSCLENTDKRCGID 926 (1427)
Q Consensus 890 ad~VD~av~GmG~~------t--------gn~~lE~vv~~L~~~g~~tgid 926 (1427)
|+.|-..+.+-+-| . ..-+.++++..++..|+.+..+
T Consensus 287 an~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 337 (348)
T 3iix_A 287 ANVIMPNWTPSPYRQLYQLYPGKICVFEKDTACIPCVMKMIELLGRKPGRD 337 (348)
T ss_dssp CCEECCBCCCTTTGGGCCSSSCCTTTTSCTTCHHHHHHHHHHHTTCEECSS
T ss_pred CcEEeCCCCchhcccccccCCCCcccCCCchhhHHHHHHHHHHcCCEeCCC
Confidence 99987444433321 1 1124677888888777765544
No 153
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=95.67 E-value=0.028 Score=50.12 Aligned_cols=69 Identities=22% Similarity=0.327 Sum_probs=50.5
Q ss_pred eeccCCCCCcceeeeeecCCcceEEEeecccccccCCceEEEEEECCEEeEechhhhhhhhccccCCCCCCCceecCCCe
Q psy15244 1287 IFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGQLRSLDKNKAKKLKLRSKADSDTAGEIGAPMPG 1366 (1427)
Q Consensus 1287 v~v~~~~~g~~~~~~v~~Gd~~~~~~~~i~~~~~~~g~r~v~~elnG~~~~vd~~~~~~~~~~~~a~~~~~~~V~APm~G 1366 (1427)
..+.+++.|...+|.++.|+.+ .. |..-..++-. .....|.||..|
T Consensus 6 ~~v~a~~~G~v~~~~v~~G~~V-----------~~-G~~l~~i~~~----------------------~~~~~i~ap~~G 51 (74)
T 2d5d_A 6 NVVSAPMPGKVLRVLVRVGDRV-----------RV-GQGLLVLEAM----------------------KMENEIPSPRDG 51 (74)
T ss_dssp CEEECSSCEEEEEECCCTTCEE-----------CT-TCEEEEEEET----------------------TEEEEEECSSSE
T ss_pred eEEecCCCEEEEEEEcCCCCEe-----------CC-CCEEEEEecc----------------------cceEEEeCCCCE
Confidence 4566788888888888888876 22 3222222211 013479999999
Q ss_pred EEEEEEecCCCEEecCCEEEEEE
Q psy15244 1367 NIIEVKVKVGQQVKKNDVLIVMS 1389 (1427)
Q Consensus 1367 ~v~~v~V~~Gd~V~~G~~l~~ie 1389 (1427)
+|.++.+++|+.|..|++|+.|+
T Consensus 52 ~v~~~~~~~G~~v~~g~~l~~i~ 74 (74)
T 2d5d_A 52 VVKRILVKEGEAVDTGQPLIELG 74 (74)
T ss_dssp EEEEECCCTTCEECTTCEEEEEC
T ss_pred EEEEEEcCCcCEECCCCEEEEEC
Confidence 99999999999999999999875
No 154
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=95.63 E-value=0.0097 Score=76.58 Aligned_cols=110 Identities=14% Similarity=0.076 Sum_probs=79.4
Q ss_pred HHHHHHHHHhCCCC------CCCCcc-ccCCCHHHHHHHHHhcC-CcEEEeecCCCCCc----CeEEecCHHHHHHHHHH
Q psy15244 172 KVLARDAALKADVP------IIPGTT-EPVTDVDKVKEFCDEVE-FPVILKAAFGGGGR----GMRMVANKDAIEENFKR 239 (1427)
Q Consensus 172 K~~~r~~a~~aGVp------vp~~~~-~~v~s~eea~~~a~~iG-yPvVVKP~~GgGGr----GV~iV~s~eeL~~a~~~ 239 (1427)
-+..|+++.++++| .+++.. ...++.+++.+.++.+| +|+|+|+..-.||| ||+++.|++|+.+++.+
T Consensus 8 Ey~aK~ll~~~~~~~~~~~~~~~~~~v~~~~~~~eA~~aa~~lg~~pvVvKaQv~~GgRGKaGGVkL~~s~eEa~~aa~~ 87 (829)
T 3pff_A 8 EQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKP 87 (829)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCTHHHHSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHHTT
T ss_pred HHHHHHHHHHhCccccccccCCceEEeCCCCCHHHHHHHHHHhCCCCEEEEecccccCCCcCCeEEEECCHHHHHHHHHH
Confidence 36788999999998 334431 12235588888888888 99999997655554 79999999999998876
Q ss_pred HHHHHHHccC----CCcEEEEeeccC--CceEEEEEEecccccEEEee
Q psy15244 240 AQSEALASFG----KDDMLVEKYIDR--PRHIEVQILGDKYGDVVHLY 281 (1427)
Q Consensus 240 a~~ea~~~fg----~~~vlVEeyIeg--greieVqvl~Dg~G~vv~l~ 281 (1427)
.........+ -..++||++++. ++|+-+.+..|..|.++.+.
T Consensus 88 iLg~~~~~~~p~~~V~gvLVE~m~~~~~~~ElYvgI~~Dr~gpvIm~s 135 (829)
T 3pff_A 88 RLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFH 135 (829)
T ss_dssp TTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhcCCCceEEEEEEEecccCCCccEEEEEEEecCCCCEEEEE
Confidence 5432211000 245899999974 48999999999887766543
No 155
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=95.61 E-value=0.027 Score=50.76 Aligned_cols=71 Identities=25% Similarity=0.279 Sum_probs=51.3
Q ss_pred cceeccCCCCCcceeeeeecCCcceEEEeecccccccCCceEEEEEECCEEeEechhhhhhhhccccCCCCCCCceecCC
Q psy15244 1285 ERIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGQLRSLDKNKAKKLKLRSKADSDTAGEIGAPM 1364 (1427)
Q Consensus 1285 ~~v~v~~~~~g~~~~~~v~~Gd~~~~~~~~i~~~~~~~g~r~v~~elnG~~~~vd~~~~~~~~~~~~a~~~~~~~V~APm 1364 (1427)
....+.+++.|...+|.++.|+.+ .. |..-..++-. .....|.||+
T Consensus 7 ~~~~v~a~~~G~v~~~~v~~G~~V-----------~~-G~~L~~l~~~----------------------~~~~~i~Ap~ 52 (77)
T 1dcz_A 7 GEGEIPAPLAGTVSKILVKEGDTV-----------KA-GQTVLVLEAM----------------------KMETEINAPT 52 (77)
T ss_dssp CSSEEEBSSSCEEEEECCCTTCEE-----------CT-TSEEEEEEET----------------------TEEEEEECSS
T ss_pred CCeEEECCCCEEEEEEEcCCcCEE-----------cC-CCEEEEEEcc----------------------ceeEEEECCC
Confidence 345667788888888888888775 22 3222222110 0135799999
Q ss_pred CeEEEEEEecCCCEEecCCEEEEEE
Q psy15244 1365 PGNIIEVKVKVGQQVKKNDVLIVMS 1389 (1427)
Q Consensus 1365 ~G~v~~v~V~~Gd~V~~G~~l~~ie 1389 (1427)
.|+|.++.+++|+.|..|++|+.||
T Consensus 53 ~G~v~~~~~~~G~~v~~G~~l~~i~ 77 (77)
T 1dcz_A 53 DGKVEKVLVKERDAVQGGQGLIKIG 77 (77)
T ss_dssp SEEEEEECCCTTCBCCBTSEEEEEC
T ss_pred CEEEEEEecCCcCEECCCCEEEEEC
Confidence 9999999999999999999999885
No 156
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=95.29 E-value=0.02 Score=51.81 Aligned_cols=33 Identities=24% Similarity=0.454 Sum_probs=30.8
Q ss_pred CCceecCCCeEEEEEEecCCCEEecCCEEEEEE
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMS 1389 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ie 1389 (1427)
...|.||..|+|.++++++|+.|..|++|+.|+
T Consensus 44 ~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 44 TVKIPSPVRGKIVKILYREGQVVPVGSTLLQID 76 (77)
T ss_dssp EEECCCCCCEEEEEECCCTTCEECSCSEEEEEE
T ss_pred EEEEECCCCEEEEEEEeCCcCEECCCCEEEEEE
Confidence 357999999999999999999999999999986
No 157
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=95.27 E-value=0.025 Score=51.45 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=31.3
Q ss_pred CCceecCCCeEEEEEEecCCCEEecCCEEEEEEc
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSV 1390 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~iea 1390 (1427)
...|.||..|+|.++++++|+.|..|++|+.|+.
T Consensus 44 ~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 44 VMEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp EEEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred eEEEEcCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 3679999999999999999999999999999864
No 158
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=95.26 E-value=0.37 Score=55.03 Aligned_cols=184 Identities=11% Similarity=0.159 Sum_probs=105.0
Q ss_pred EEEEEEEeeccCCCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEcccc------CcCCHHHHHHHH---HHHHHHcCCceE
Q psy15244 798 IVEATICYAGDLTNPNKKKY-SLNYYEDLAKQLVESGAQVLCLKDMA------GLLKPTAAKLLI---GSFREKYPNILI 867 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~-~~~~~~~~a~~l~~~Gad~i~i~Dt~------G~l~P~~~~~lv---~~lr~~~p~ipi 867 (1427)
.+-+-+..|-| +-.|.++| +.+..++.++++.+.|||+|-|.=.. .+...+++.+++ +++++.+ ++||
T Consensus 41 ~iMgilNvTPD-SFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpi 118 (297)
T 1tx2_A 41 LIMGILNVTPD-SFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPI 118 (297)
T ss_dssp EEEEECCCCCC-TTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCE
T ss_pred EEEEEEeCCCC-ccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceE
Confidence 44455555544 12234555 67999999999999999999887211 222245565555 7778877 8999
Q ss_pred EEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh------CCCCCCC-C--hhhHHHHHHHHH
Q psy15244 868 HVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN------TDKRCGI-D--LHDVCDYSSYWR 938 (1427)
Q Consensus 868 ~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~------~g~~tgi-d--l~~L~~l~~~v~ 938 (1427)
.+++.+ ...+.+|+++|+++|+-...+ ..-+.+-.+++.... ....+.+ | .+.+..+.+.++
T Consensus 119 SIDT~~-----~~V~~aAl~aGa~iINdvsg~----~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~ 189 (297)
T 1tx2_A 119 SIDTYK-----AEVAKQAIEAGAHIINDIWGA----KAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIK 189 (297)
T ss_dssp EEECSC-----HHHHHHHHHHTCCEEEETTTT----SSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHH
T ss_pred EEeCCC-----HHHHHHHHHcCCCEEEECCCC----CCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHH
Confidence 999875 566678999999999644322 223555444443321 1001111 1 123445555666
Q ss_pred HHhCCCCCCCCcccccch-hhhhHHHHHHHHHHhhhhcCCCCCCCCCcCcccEEEe
Q psy15244 939 KVRELYAPAHNLLWRCGI-DLHDVCDYSSYWRKVRELYAPFECTDLKAASSEAYLY 993 (1427)
Q Consensus 939 ~~~g~~~~~~kpivG~~~-f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~~~v~~~ 993 (1427)
.....-+++.+.++--++ |.. ...|.--+.+.-..+..+.+|-+.|.++.-+++
T Consensus 190 ~a~~~GI~~~~IilDPg~Gfgk-~~~~n~~ll~~l~~l~~lg~Pvl~G~Srksfig 244 (297)
T 1tx2_A 190 IAKDAGVRDENIILDPGIGFAK-TPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIG 244 (297)
T ss_dssp HHHHTTCCGGGEEEECCTTSSC-CHHHHHHHHHTGGGGGGGCSCBEEECTTCHHHH
T ss_pred HHHHcCCChhcEEEeCCCCcCC-CHHHHHHHHHHHHHHHhCCCCEEEEeccchhhh
Confidence 665555666665554444 422 333443444433334445556666665544443
No 159
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=94.98 E-value=0.35 Score=54.90 Aligned_cols=184 Identities=13% Similarity=0.076 Sum_probs=108.0
Q ss_pred EEEEEEEeeccCCCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEcc-cc--C------cCCHHHHHHHHHHHHHHcCCceE
Q psy15244 798 IVEATICYAGDLTNPNKKKY-SLNYYEDLAKQLVESGAQVLCLKD-MA--G------LLKPTAAKLLIGSFREKYPNILI 867 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~-~~~~~~~~a~~l~~~Gad~i~i~D-t~--G------~l~P~~~~~lv~~lr~~~p~ipi 867 (1427)
.+-+-|..|.|=++ |.+++ +.+..++.++++.+.|||+|-|.= ++ | --...++..+|+++++.+ ++||
T Consensus 16 ~imGilN~TpdSFs-dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~pi 93 (282)
T 1aj0_A 16 HVMGILNVTPDSFS-DGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWI 93 (282)
T ss_dssp EEEEEEECCTTTSC-CCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEE
T ss_pred EEEEEEeCCCCccc-cccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeE
Confidence 45566777766332 34555 689999999999999999998864 21 2 111234566778888887 8999
Q ss_pred EEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh------C-CCCC------CCC---hhhHH
Q psy15244 868 HVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN------T-DKRC------GID---LHDVC 931 (1427)
Q Consensus 868 ~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~------~-g~~t------gid---l~~L~ 931 (1427)
.+++.+ ...+.+|+++|+++|+-...+ .-+.+-.+++...- . |... .++ .+.+.
T Consensus 94 SIDT~~-----~~va~aAl~aGa~iINdvsg~-----~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~ 163 (282)
T 1aj0_A 94 SVDTSK-----PEVIRESAKVGAHIINDIRSL-----SEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNR 163 (282)
T ss_dssp EEECCC-----HHHHHHHHHTTCCEEEETTTT-----CSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHH
T ss_pred EEeCCC-----HHHHHHHHHcCCCEEEECCCC-----CCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHH
Confidence 999987 566679999999999755432 34555555544331 1 1111 111 11244
Q ss_pred HHHHHHHHHhCCCCCCCCcccccchhhhhHHHHHHHHHHhhhhcCCCCCCCCCcCcccEEEe
Q psy15244 932 DYSSYWRKVRELYAPAHNLLWRCGIDLHDVCDYSSYWRKVRELYAPFECTDLKAASSEAYLY 993 (1427)
Q Consensus 932 ~l~~~v~~~~g~~~~~~kpivG~~~f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~~~v~~~ 993 (1427)
.+.+.++.....-+++++=++--++.-.+...|.-.+.+.-..+..+.+|-+.|.++.-+++
T Consensus 164 ~l~~~i~~a~~~Gi~~~~IilDPg~gf~k~~~~n~~ll~~l~~~~~~g~P~l~G~Srksfig 225 (282)
T 1aj0_A 164 YFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIG 225 (282)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEECCTTCHHHH
T ss_pred HHHHHHHHHHHcCCChhhEEEeCCCCcccCHHHHHHHHHHHHHHhcCCCCEEEEECccHhHH
Confidence 55556666655556655533322221133444554444444444445556666666544444
No 160
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=94.92 E-value=3.2 Score=46.33 Aligned_cols=235 Identities=18% Similarity=0.157 Sum_probs=155.7
Q ss_pred CCeEEeecCcccCCCCCCC---cccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccC-h----HHHHHHHHH
Q psy15244 657 KHILLTDTTFRDAHQSLLA---TRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKEC-P----WERLAELRE 728 (1427)
Q Consensus 657 ~~v~i~DtTlRDG~Qsl~a---~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~-p----~erl~~lr~ 728 (1427)
+.|.|=++|+=+|.- ... +.=+.++++.-++.+.. .|.+.+|.- .| |+.+. + .+.+..+|+
T Consensus 6 ~~v~v~~~~ig~g~P-kIcvpl~~~t~~e~l~~a~~~~~--~~aD~vElR----~D----~l~~~~~~~~v~~~l~~lr~ 74 (258)
T 4h3d_A 6 RKVQVKNITIGEGRP-KICVPIIGKNKKDIIKEAKELKD--ACLDIIEWR----VD----FFENVENIKEVKEVLYELRS 74 (258)
T ss_dssp CCEEETTEEETSSSC-EEEEEECCSSHHHHHHHHHHHTT--SSCSEEEEE----GG----GCTTTTCHHHHHHHHHHHHH
T ss_pred ceEEEcCEEeCCCCC-EEEEEeCCCCHHHHHHHHHHHhh--cCCCEEEEe----ec----cccccCCHHHHHHHHHHHHH
Confidence 567788888877752 111 23466888887877766 799999974 22 44331 1 345677888
Q ss_pred hCCCCceeeeecccccccccCCCcchHHHHHHHHHhcC-CCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeec
Q psy15244 729 LIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAG-IDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAG 807 (1427)
Q Consensus 729 ~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~G-id~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~ 807 (1427)
...+.|+-.-+|...==|.....++.....++.+.+.| +|.+-|-....+ +.....++.+++.|. .+- ++| .
T Consensus 75 ~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~-~~~~~l~~~a~~~~~---kiI--~S~-H 147 (258)
T 4h3d_A 75 YIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGD-EVIDEVVNFAHKKEV---KVI--ISN-H 147 (258)
T ss_dssp HCTTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGGCH-HHHHHHHHHHHHTTC---EEE--EEE-E
T ss_pred hcCCCCEEEEEechhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhccH-HHHHHHHHHHHhCCC---EEE--EEE-e
Confidence 88888988888876545555556666667777888877 888888776543 345666777787776 332 334 2
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHH---HHcCCceEEEeecCCcchHHHHHHH
Q psy15244 808 DLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFR---EKYPNILIHVHTHDMAGTGVATTLA 884 (1427)
Q Consensus 808 d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr---~~~p~ipi~~H~Hnd~GlA~An~la 884 (1427)
||.. --+.+.+.+...++.+.|||++-|+=|+- .+.++.+|..+.+ +..++.|+-.-+ .-.+|.-+=+.
T Consensus 148 df~~----TP~~~el~~~~~~~~~~gaDIvKia~~~~--~~~D~l~Ll~~~~~~~~~~~~~P~I~~~--MG~~G~~SRi~ 219 (258)
T 4h3d_A 148 DFNK----TPKKEEIVSRLCRMQELGADLPKIAVMPQ--NEKDVLVLLEATNEMFKIYADRPIITMS--MSGMGVISRLC 219 (258)
T ss_dssp ESSC----CCCHHHHHHHHHHHHHTTCSEEEEEECCS--SHHHHHHHHHHHHHHHHHTCSSCBEEEE--CTGGGGGGGTC
T ss_pred cCCC----CCCHHHHHHHHHHHHHhCCCEEEEEEccC--CHHHHHHHHHHHHHHHHhcCCCCEEEEe--CCCCChHHHHH
Confidence 4422 23467888999999999999999986654 5677777776544 445677765433 22334445556
Q ss_pred HHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh
Q psy15244 885 CVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN 918 (1427)
Q Consensus 885 Ai~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~ 918 (1427)
+-..|--+..+++. -.--+||.+++++-..|+-
T Consensus 220 ~~~fGS~lTf~~~~-~~sAPGQl~~~el~~~l~l 252 (258)
T 4h3d_A 220 GEIFGSALTFGAAK-SVSAPGQISFKELNSVLNL 252 (258)
T ss_dssp HHHHCBCEEECBCC----CTTCCBHHHHHHHHHH
T ss_pred HHHhCCceEeccCC-CCCCCCCCCHHHHHHHHHH
Confidence 66678777777763 4567899999988877764
No 161
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=94.88 E-value=0.027 Score=51.23 Aligned_cols=34 Identities=35% Similarity=0.669 Sum_probs=31.9
Q ss_pred CCceecCCCeEEEEEEecCCCEEecCCEEEEEEc
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSV 1390 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~iea 1390 (1427)
...|.||..|+|.+++|++|+.|..|++|+.|+.
T Consensus 43 ~~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~ 76 (80)
T 1qjo_A 43 SMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEV 76 (80)
T ss_dssp CEEEEBSSCEEEEECCCCTTCEECTTCCCEEEES
T ss_pred eEEEeCCCCEEEEEEecCCCCEECCCCEEEEEEc
Confidence 5689999999999999999999999999999975
No 162
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=94.83 E-value=0.013 Score=55.56 Aligned_cols=71 Identities=20% Similarity=0.346 Sum_probs=21.6
Q ss_pred cceeccCCCCCcceeeeeecCCcceEEEeecccccccCCceEEEEEECCEEeEechhhhhhhhccccCCCCCCCceecCC
Q psy15244 1285 ERIFLNGPNIGEEFSCEFKTGDTAYVTTLSISEHLNDHGERTVFFLYNGQLRSLDKNKAKKLKLRSKADSDTAGEIGAPM 1364 (1427)
Q Consensus 1285 ~~v~v~~~~~g~~~~~~v~~Gd~~~~~~~~i~~~~~~~g~r~v~~elnG~~~~vd~~~~~~~~~~~~a~~~~~~~V~APm 1364 (1427)
....+.+++.|...+|.++.|+.+ .. |..-..++ . ......|.||.
T Consensus 24 ~~~~v~a~~~G~v~~~~v~~Gd~V-----------~~-Gq~L~~ie---------~-------------~k~~~~i~AP~ 69 (94)
T 2jku_A 24 TSSVLRSPMPGVVVAVSVKPGDAV-----------AE-GQEICVIE---------A-------------MKMQNSMTAGK 69 (94)
T ss_dssp CCCCCCCSSSCEEEEECCCTTCCC-----------CT-TCCCEEEE---------C------------------------
T ss_pred CceEEECCCCEEEEEEECCCCCEE-----------cC-CCEEEEEe---------c-------------ccccEEEECCC
Confidence 445677888999999999989886 22 22111111 0 01235799999
Q ss_pred CeEEEEEEecCCCEEecCCEEEEEE
Q psy15244 1365 PGNIIEVKVKVGQQVKKNDVLIVMS 1389 (1427)
Q Consensus 1365 ~G~v~~v~V~~Gd~V~~G~~l~~ie 1389 (1427)
.|+|.++.+++|+.|..|++|+.||
T Consensus 70 ~G~V~~~~v~~G~~V~~G~~L~~ie 94 (94)
T 2jku_A 70 TGTVKSVHCQAGDTVGEGDLLVELE 94 (94)
T ss_dssp -------------------------
T ss_pred CEEEEEEcCCCcCEECCCCEEEEEC
Confidence 9999999999999999999999875
No 163
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=94.83 E-value=0.013 Score=54.29 Aligned_cols=32 Identities=22% Similarity=0.404 Sum_probs=30.3
Q ss_pred eeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1395 TLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1395 ~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
..|.||.+|+|.++.+++|+.|++||+|++|+
T Consensus 6 ~~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie 37 (84)
T 2kcc_A 6 TVLRSPSAGKLTQYTVEDGGHVEAGSSYAEME 37 (84)
T ss_dssp TEECCSSSCCEEEESSCTTEEECTTCEEEEEE
T ss_pred ceEECCCCEEEEEEECCCCCEECCCCEEEEEE
Confidence 35999999999999999999999999999987
No 164
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=94.81 E-value=0.052 Score=60.50 Aligned_cols=179 Identities=16% Similarity=0.109 Sum_probs=111.2
Q ss_pred CHHHHHHHHHHHHhhcCCccEEeccCCC--------chh-hhhhcccc-----ChHHHHHHHHHhCCCCceeeeeccccc
Q psy15244 679 RTYDLKKVSPFVANRFNNLYSLEMWGGA--------VSH-TCLKFLKE-----CPWERLAELRELIPNIPFQMILRGNSL 744 (1427)
Q Consensus 679 ~t~d~l~ia~~l~~~~~G~~~iE~~gga--------tfd-~~~rfl~e-----~p~erl~~lr~~~p~~~~qml~Rg~n~ 744 (1427)
+.+.-+++++.|.+ .|.+.||+|-|. +.. ++.|-|.. +-|+.++++|+ ++|+-++
T Consensus 26 ~~~~t~~~~~~l~~--~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~---~~Pivlm------ 94 (252)
T 3tha_A 26 NLQTSEAFLQRLDQ--SPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKT---KKALVFM------ 94 (252)
T ss_dssp CHHHHHHHHHTGGG--SSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCC---SSEEEEE------
T ss_pred CHHHHHHHHHHHHH--cCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhc---CCCEEEE------
Confidence 45778899999998 899999998432 222 22333332 22444444443 3443332
Q ss_pred ccccCCC-cchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHH
Q psy15244 745 VGYSNYS-PAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYE 823 (1427)
Q Consensus 745 vgy~~~~-~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~ 823 (1427)
||-|-. .-=++.|++.++++|+|.+-|-|- .++......+.+++.|. .. |.+. .| ..+.+.
T Consensus 95 -~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDL--P~eE~~~~~~~~~~~Gl---~~---I~lv----aP---~t~~eR-- 156 (252)
T 3tha_A 95 -VYYNLIFSYGLEKFVKKAKSLGICALIVPEL--SFEESDDLIKECERYNI---AL---ITLV----SV---TTPKER-- 156 (252)
T ss_dssp -CCHHHHHHHCHHHHHHHHHHTTEEEEECTTC--CGGGCHHHHHHHHHTTC---EE---CEEE----ET---TSCHHH--
T ss_pred -eccCHHHHhhHHHHHHHHHHcCCCEEEeCCC--CHHHHHHHHHHHHHcCC---eE---EEEe----CC---CCcHHH--
Confidence 343311 111578999999999999988884 34567778888999998 32 2222 34 233443
Q ss_pred HHHHHHHHCCCCEEEEc---cccCcCCH--HHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEE
Q psy15244 824 DLAKQLVESGAQVLCLK---DMAGLLKP--TAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIV 893 (1427)
Q Consensus 824 ~~a~~l~~~Gad~i~i~---Dt~G~l~P--~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~V 893 (1427)
++++.+.+-.-|++. .++|.-++ ..+.++++.+|+.. ++|+.+ -+|.......+++..+||.|
T Consensus 157 --i~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~v----GfGIst~e~a~~~~~~ADGV 224 (252)
T 3tha_A 157 --VKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFT-NLPIFV----GFGIQNNQDVKRMRKVADGV 224 (252)
T ss_dssp --HHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC-CSCEEE----ESSCCSHHHHHHHTTTSSEE
T ss_pred --HHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhc-CCcEEE----EcCcCCHHHHHHHHhcCCEE
Confidence 444444444445554 45676544 45788999999886 888877 34555566666666677765
No 165
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=94.66 E-value=2.6 Score=49.41 Aligned_cols=211 Identities=10% Similarity=0.032 Sum_probs=131.8
Q ss_pred ccCHHHHHHHHHHHHhhcCCccEEeccCCCc--hhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcch
Q psy15244 677 RVRTYDLKKVSPFVANRFNNLYSLEMWGGAV--SHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAE 754 (1427)
Q Consensus 677 r~~t~d~l~ia~~l~~~~~G~~~iE~~ggat--fd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nv 754 (1427)
.++.+++++.++.+.+ .|+..|-++||.+ ..... +.-.+-++.+++. +..+. + . .|+ +
T Consensus 98 ~~s~eei~~~~~~~~~--~g~~~i~~~gg~~~p~~~~~----~~l~~ll~~ik~~--g~~i~--~--t--~G~------l 157 (369)
T 1r30_A 98 LMEVEQVLESARKAKA--AGSTRFCMGAAWKNPHERDM----PYLEQMVQGVKAM--GLEAC--M--T--LGT------L 157 (369)
T ss_dssp CCCHHHHHHHHHHHHH--TTCSEEEEEECCSSCCTTTH----HHHHHHHHHHHHT--TSEEE--E--E--CSS------C
T ss_pred cCCHHHHHHHHHHHHH--cCCcEEEEEeCCCCCCcCCH----HHHHHHHHHHHHc--CCeEE--E--e--cCC------C
Confidence 3788999999988877 6998887765421 11111 1112334455543 22221 1 1 122 2
Q ss_pred HHHHHHHHHhcCCCEEEEeccCC-----------hHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPLN-----------SVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYE 823 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~n-----------d~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~ 823 (1427)
..+.++..+++|++.+.+..-.+ +.+....+++.++++|. .+...+.+. + .-+.+.+.
T Consensus 158 ~~e~l~~L~~aGvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi---~v~~~~I~G--l------~et~ed~~ 226 (369)
T 1r30_A 158 SESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGI---KVCSGGIVG--L------GETVKDRA 226 (369)
T ss_dssp CHHHHHHHHHHCCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHC---EEECCEEEC--S------SCCHHHHH
T ss_pred CHHHHHHHHHCCCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCC---eeeeeeEee--C------CCCHHHHH
Confidence 24457788889999988764444 23566788899999998 665554443 1 25788899
Q ss_pred HHHHHHHHCC--CCEEEE------ccc----cCcCCHHHHHHHHHHHHHHcCCceEEEeec-CCcchHHHHHHHHHHhcC
Q psy15244 824 DLAKQLVESG--AQVLCL------KDM----AGLLKPTAAKLLIGSFREKYPNILIHVHTH-DMAGTGVATTLACVKAGA 890 (1427)
Q Consensus 824 ~~a~~l~~~G--ad~i~i------~Dt----~G~l~P~~~~~lv~~lr~~~p~ipi~~H~H-nd~GlA~An~laAi~AGa 890 (1427)
+.++.+.+++ ++.+.+ .+| .....+.+..+++...|..+|+..+++=+- .+.| -.....++.+||
T Consensus 227 ~~l~~l~~l~~~~~~i~~~~l~p~~gT~l~~~~~~~~~~~~~~~~~~r~~l~~~~i~i~~~~~~l~--~~~~~~~l~~Ga 304 (369)
T 1r30_A 227 GLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMN--EQTQAMCFMAGA 304 (369)
T ss_dssp HHHHHHHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTSEEEEESSGGGSC--HHHHHHHHHHTC
T ss_pred HHHHHHHhhcCCCCEEEeeeeeecCCCcCCCCCCCCHHHHHHHHHHHHHhCCCCceEeecchhhcC--hHHHHHHhhCCC
Confidence 9999999998 777654 233 123566888889999998888754433210 1122 233456889999
Q ss_pred CEEEeccccC-CCCCCCCcHHHHHHHHHhCCCCC
Q psy15244 891 DIVDVAADSM-SGICSQPAMGTIVSCLENTDKRC 923 (1427)
Q Consensus 891 d~VD~av~Gm-G~~tgn~~lE~vv~~L~~~g~~t 923 (1427)
+.+ +.|- =..+++++.++.+..++..|+.+
T Consensus 305 n~~---~~g~~~~t~~~~~~~~~~~~i~~~g~~~ 335 (369)
T 1r30_A 305 NSI---FYGCKLLTTPNPEEDKDLQLFRKLGLNP 335 (369)
T ss_dssp CEE---ECSSBSSSSBCCCHHHHHHHHHHTTCCS
T ss_pred ceE---EeCCeeeCCCCCCHHHHHHHHHHcCCCe
Confidence 943 2221 01246788999999999887654
No 166
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=94.62 E-value=0.051 Score=51.23 Aligned_cols=34 Identities=12% Similarity=0.100 Sum_probs=31.5
Q ss_pred CCceecCCCeEEEEEEecCCCEEecCCEEEEEEc
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSV 1390 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~iea 1390 (1427)
...|.||..|+|.+++|++|+.|..|++|+.|+.
T Consensus 47 ~~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~~ 80 (93)
T 1k8m_A 47 SVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIET 80 (93)
T ss_dssp EEECCCSSCEEEEEECCCSSCEECTTSEEEEEEC
T ss_pred EEEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEec
Confidence 4678999999999999999999999999999974
No 167
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=94.57 E-value=0.056 Score=50.21 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=31.5
Q ss_pred CCceecCCCeEEEEEEecCCC-EEecCCEEEEEEc
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQ-QVKKNDVLIVMSV 1390 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd-~V~~G~~l~~iea 1390 (1427)
...|.||..|+|.+++|++|+ .|..|++|+.|+.
T Consensus 48 ~~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~~ 82 (87)
T 3crk_C 48 TIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVE 82 (87)
T ss_dssp EEEEECCSCEEEEEESSCTTCCCEETTCEEEEEES
T ss_pred cceeecCcCcEEEEEEECCCCeEECCCCEEEEEEc
Confidence 467999999999999999999 8999999999985
No 168
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=94.53 E-value=0.21 Score=58.19 Aligned_cols=183 Identities=14% Similarity=0.099 Sum_probs=119.7
Q ss_pred CHHHHHHHHHHHHhhcCCccEEecc--------CCCc--hhh---------hhhccccChHHHHHHHHHhCCCCceeeee
Q psy15244 679 RTYDLKKVSPFVANRFNNLYSLEMW--------GGAV--SHT---------CLKFLKECPWERLAELRELIPNIPFQMIL 739 (1427)
Q Consensus 679 ~t~d~l~ia~~l~~~~~G~~~iE~~--------ggat--fd~---------~~rfl~e~p~erl~~lr~~~p~~~~qml~ 739 (1427)
+.+..+++++...+ +|.+.+=.. .+.. |+. -++++ +-+|+.++.|.+.....-+..+.
T Consensus 33 s~e~a~~li~~ak~--aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~-~l~~e~~~~L~~~~~~~Gi~~~s 109 (349)
T 2wqp_A 33 SLKTAFEMVDAAYN--AGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERC-ALNEEDEIKLKEYVESKGMIFIS 109 (349)
T ss_dssp CHHHHHHHHHHHHH--HTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHH-CCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHH--hCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHh-CCCHHHHHHHHHHHHHhCCeEEE
Confidence 56778888888888 688877653 1111 110 01111 35788888888877665555554
Q ss_pred cccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCH
Q psy15244 740 RGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSL 819 (1427)
Q Consensus 740 Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~ 819 (1427)
.- -+ ...++...+.|+|.+.|-.. ++.|+. .++++.+.|+ ..|.-|| -.++
T Consensus 110 t~----------~d--~~svd~l~~~~v~~~KI~S~--~~~n~~-LL~~va~~gk------PviLstG--------mat~ 160 (349)
T 2wqp_A 110 TL----------FS--RAAALRLQRMDIPAYKIGSG--ECNNYP-LIKLVASFGK------PIILSTG--------MNSI 160 (349)
T ss_dssp EE----------CS--HHHHHHHHHHTCSCEEECGG--GTTCHH-HHHHHHTTCS------CEEEECT--------TCCH
T ss_pred ee----------CC--HHHHHHHHhcCCCEEEECcc--cccCHH-HHHHHHhcCC------eEEEECC--------CCCH
Confidence 32 22 22366677788999988654 233332 2444555677 2333443 4699
Q ss_pred HHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHH--HHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 820 NYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLL--IGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 820 ~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~l--v~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
+.+...++.+.+.|.+.+-+-=+.+.=+|.....| |..||+.+|++||++=.|-+ | .+.++||+.+||++|+.=
T Consensus 161 ~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~-G--~~~~~AAvAlGA~iIEkH 236 (349)
T 2wqp_A 161 ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTL-D--NYACLGAVALGGSILERH 236 (349)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSS-S--SHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCC-c--HHHHHHHHHhCCCEEEeC
Confidence 99999999999999854433335555555555444 88999999889999977764 4 788899999999988654
No 169
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=94.52 E-value=4.3 Score=45.34 Aligned_cols=235 Identities=15% Similarity=0.131 Sum_probs=155.0
Q ss_pred CCCeEEeecCcccCCCCCCC---cccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhcccc-ChH----HHHHHHH
Q psy15244 656 LKHILLTDTTFRDAHQSLLA---TRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKE-CPW----ERLAELR 727 (1427)
Q Consensus 656 ~~~v~i~DtTlRDG~Qsl~a---~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e-~p~----erl~~lr 727 (1427)
++.|.+-+.++..|.- ... +.=+.++++..++.+.. .|.+.+|.- .| |+.+ +++ +.+..||
T Consensus 5 ~~~~~v~~~~~g~~~p-~Icv~l~~~~~~e~~~~~~~~~~--~~~D~vElR----vD----~l~~~~~~~~v~~~l~~lr 73 (257)
T 2yr1_A 5 PKAIKVRNIWIGGTEP-CICAPVVGEDDRKVLREAEEVCR--KQPDLLEWR----AD----FFRAIDDQERVLATANGLR 73 (257)
T ss_dssp SSCEEETTEEESSSSC-EEEEEECCSSHHHHHHHHHHHHH--SCCSEEEEE----GG----GCTTTTCHHHHHHHHHHHH
T ss_pred CceEEEeeeeeCCCCc-EEEEEecCCCHHHHHHHHHHHhh--cCCCEEEEE----ee----cccccCcHHHHHHHHHHHH
Confidence 4567777777777653 112 22344565565655444 689999962 22 2322 122 3456788
Q ss_pred HhCCCCceeeeeccccccccc-CCCcchHHHHHHHHHhcC-CCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEe
Q psy15244 728 ELIPNIPFQMILRGNSLVGYS-NYSPAEVGAFCRLASQAG-IDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICY 805 (1427)
Q Consensus 728 ~~~p~~~~qml~Rg~n~vgy~-~~~~nvv~~~v~~a~~~G-id~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~ 805 (1427)
+...+.|+-.-+|...-=|-. ...++...+.++.+++.| +|.+-|=....+ .+...++.+++.|. .+- ++|
T Consensus 74 ~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~--~~~~l~~~~~~~~~---kvI--~S~ 146 (257)
T 2yr1_A 74 NIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYGE--RIADVRRMTEECSV---WLV--VSR 146 (257)
T ss_dssp HHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGGTT--HHHHHHHHHHHTTC---EEE--EEE
T ss_pred HhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCCCh--hHHHHHHHHHhCCC---EEE--EEe
Confidence 877778877777754333433 456666777889999998 999988777666 66677787887776 332 244
Q ss_pred eccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHH--cCCceEEEeecCCcchHHHHHH
Q psy15244 806 AGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREK--YPNILIHVHTHDMAGTGVATTL 883 (1427)
Q Consensus 806 t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~--~p~ipi~~H~Hnd~GlA~An~l 883 (1427)
- ||... -+.+.+.+..+++.+.|||++-|+=|+- .+.++..|..+..+. .++.|+-.-+ .-.+|...=+
T Consensus 147 H-df~~t----P~~~el~~~~~~~~~~gaDivKia~~a~--s~~D~l~ll~~~~~~~~~~~~P~I~~~--MG~~G~~SRi 217 (257)
T 2yr1_A 147 H-YFDGT----PRKETLLADMRQAERYGADIAKVAVMPK--SPEDVLVLLQATEEARRELAIPLITMA--MGGLGAITRL 217 (257)
T ss_dssp E-ESSCC----CCHHHHHHHHHHHHHTTCSEEEEEECCS--SHHHHHHHHHHHHHHHHHCSSCEEEEE--CTTTTHHHHH
T ss_pred c-CCCCC----cCHHHHHHHHHHHHhcCCCEEEEEeccC--CHHHHHHHHHHHHHHhccCCCCEEEEE--CCCCcchHHH
Confidence 3 33211 2368899999999999999999987764 477888888765542 2466754433 3344566677
Q ss_pred HHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh
Q psy15244 884 ACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN 918 (1427)
Q Consensus 884 aAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~ 918 (1427)
.+--.|--+.-+++. -..-+||.+.+++...|+.
T Consensus 218 ~~~~~GS~~Tf~~l~-~~sAPGQl~~~el~~~l~~ 251 (257)
T 2yr1_A 218 AGWLFGSAVTFAVGN-QSSAPGQIPIDDVRTVLSI 251 (257)
T ss_dssp HGGGGTBCEEECBSS-SCSSTTCCBHHHHHHHHHH
T ss_pred HHHHhCCceEecCCC-CCCCCCCCCHHHHHHHHHH
Confidence 777788778777774 4456899999998877764
No 170
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=94.41 E-value=0.75 Score=49.26 Aligned_cols=171 Identities=16% Similarity=0.097 Sum_probs=103.0
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
.+.++-+++++.+.. |+..+|++-+ + |+.. -.+-++.|++..|+.++-.-+.-. |+...
T Consensus 10 ~~~~~~~~~~~~~~~---~v~~iev~~~--~-----~~~~-g~~~i~~l~~~~~~~~i~~~l~~~----------di~~~ 68 (207)
T 3ajx_A 10 LSTEAALELAGKVAE---YVDIIELGTP--L-----IKAE-GLSVITAVKKAHPDKIVFADMKTM----------DAGEL 68 (207)
T ss_dssp SCHHHHHHHHHHHGG---GCSEEEECHH--H-----HHHH-CTHHHHHHHHHSTTSEEEEEEEEC----------SCHHH
T ss_pred CCHHHHHHHHHHhhc---cCCEEEECcH--H-----HHhh-CHHHHHHHHHhCCCCeEEEEEEec----------CccHH
Confidence 356778888888865 8888999532 1 1222 234678888887776654322211 22344
Q ss_pred HHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q psy15244 758 FCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVL 837 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i 837 (1427)
+++.+.++|.|.+.+-....+ +.+..+++.+++.|. .+ .+.. .+ ..+++. .++.+.+.|+|.+
T Consensus 69 ~~~~a~~~Gad~v~vh~~~~~-~~~~~~~~~~~~~g~---~~--gv~~----~s----~~~p~~---~~~~~~~~g~d~v 131 (207)
T 3ajx_A 69 EADIAFKAGADLVTVLGSADD-STIAGAVKAAQAHNK---GV--VVDL----IG----IEDKAT---RAQEVRALGAKFV 131 (207)
T ss_dssp HHHHHHHTTCSEEEEETTSCH-HHHHHHHHHHHHHTC---EE--EEEC----TT----CSSHHH---HHHHHHHTTCSEE
T ss_pred HHHHHHhCCCCEEEEeccCCh-HHHHHHHHHHHHcCC---ce--EEEE----ec----CCChHH---HHHHHHHhCCCEE
Confidence 688999999999987665543 356777888888888 43 2211 11 234443 2345556799987
Q ss_pred EEc--cc---cCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEe
Q psy15244 838 CLK--DM---AGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 838 ~i~--Dt---~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~ 895 (1427)
.+. -+ .| ..|.. +.++.++.. ++||.+= -|....|.-.++++|||.|=+
T Consensus 132 ~~~~~~~~~~~g-~~~~~--~~i~~~~~~--~~pi~v~----GGI~~~~~~~~~~aGad~vvv 185 (207)
T 3ajx_A 132 EMHAGLDEQAKP-GFDLN--GLLAAGEKA--RVPFSVA----GGVKVATIPAVQKAGAEVAVA 185 (207)
T ss_dssp EEECCHHHHTST-TCCTH--HHHHHHHHH--TSCEEEE----SSCCGGGHHHHHHTTCSEEEE
T ss_pred EEEecccccccC-CCchH--HHHHHhhCC--CCCEEEE----CCcCHHHHHHHHHcCCCEEEE
Confidence 442 11 23 23444 556665542 4555442 244445888899999998743
No 171
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=94.23 E-value=0.93 Score=50.05 Aligned_cols=184 Identities=16% Similarity=0.092 Sum_probs=107.0
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCC---chhhhh------hcc----c-cChHHHHHHHHHhCCCCceeeeecccc
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGA---VSHTCL------KFL----K-ECPWERLAELRELIPNIPFQMILRGNS 743 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~gga---tfd~~~------rfl----~-e~p~erl~~lr~~~p~~~~qml~Rg~n 743 (1427)
...++..+.++.+.+ . ++.||+.-+. ..|... +-+ + ..-.+-++.+++.. +.+++.+..
T Consensus 16 ~~~~~~~~~a~~~~~--~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~-~~pv~~~~~--- 88 (248)
T 1geq_A 16 PDKQSTLNFLLALDE--Y-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-STPIVLMTY--- 88 (248)
T ss_dssp SCHHHHHHHHHHHGG--G-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-CCCEEEEEC---
T ss_pred CCHHHHHHHHHHHHH--c-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-CCCEEEEec---
Confidence 344788899999988 5 8889987221 111110 000 0 11256677787764 566665431
Q ss_pred cccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHH
Q psy15244 744 LVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYE 823 (1427)
Q Consensus 744 ~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~ 823 (1427)
+.+.-..-..++++.+.++|+|.+.+.+-. .++.+..++.+++.|. .+-..+ +| ....+.+
T Consensus 89 ---~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~--~~~~~~~~~~~~~~g~---~~~~~i-------~~---~t~~e~~- 149 (248)
T 1geq_A 89 ---YNPIYRAGVRNFLAEAKASGVDGILVVDLP--VFHAKEFTEIAREEGI---KTVFLA-------AP---NTPDERL- 149 (248)
T ss_dssp ---HHHHHHHCHHHHHHHHHHHTCCEEEETTCC--GGGHHHHHHHHHHHTC---EEEEEE-------CT---TCCHHHH-
T ss_pred ---cchhhhcCHHHHHHHHHHCCCCEEEECCCC--hhhHHHHHHHHHHhCC---CeEEEE-------CC---CCHHHHH-
Confidence 010000013578999999999999997543 3567778888898998 443322 23 1223332
Q ss_pred HHHHHHHHCCCC-EEEEccccCcC-----CHHHHHHHHHHHHHHcCCceEEEeecCCcchHH-HHHHHHHHhcCCEEEec
Q psy15244 824 DLAKQLVESGAQ-VLCLKDMAGLL-----KPTAAKLLIGSFREKYPNILIHVHTHDMAGTGV-ATTLACVKAGADIVDVA 896 (1427)
Q Consensus 824 ~~a~~l~~~Gad-~i~i~Dt~G~l-----~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~-An~laAi~AGad~VD~a 896 (1427)
+.+.+. ++ .+++-...|.. .+....++++.+++.. ++||..= .|... .|....+++||+.|-+.
T Consensus 150 ---~~~~~~-~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~-~~pi~~~----GGI~~~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 150 ---KVIDDM-TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC-RNKVAVG----FGVSKREHVVSLLKEGANGVVVG 220 (248)
T ss_dssp ---HHHHHH-CSSEEEEECCC-------CCCHHHHHHHHHHHHHC-SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEC
T ss_pred ---HHHHhc-CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc-CCCEEEE----eecCCHHHHHHHHHcCCCEEEEc
Confidence 333332 55 66655444422 2245677899999887 7777653 45555 67777778999987543
No 172
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=94.19 E-value=0.023 Score=52.62 Aligned_cols=35 Identities=34% Similarity=0.631 Sum_probs=32.6
Q ss_pred CCceecCCCeEEEEEEecCCCEEecCCEEEEEEcC
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVM 1391 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieam 1391 (1427)
...|.||+.|+|.++++++|+.|..|++|+.|+..
T Consensus 39 ~~~i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~~~ 73 (85)
T 2k7v_A 39 SMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVE 73 (85)
T ss_dssp EEEEECSSCBCCCEECSCTTCCBCTTSEEEEEECC
T ss_pred EEEEECCCCEEEEEEEeCCCCEECCCCEEEEEEcC
Confidence 46799999999999999999999999999999864
No 173
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=94.09 E-value=1.4 Score=50.81 Aligned_cols=189 Identities=19% Similarity=0.113 Sum_probs=95.0
Q ss_pred EEEEEEEeeccCCCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEcc-c----cCcCCHHHHHHH---HHHHHHHcCCceEE
Q psy15244 798 IVEATICYAGDLTNPNKKKY-SLNYYEDLAKQLVESGAQVLCLKD-M----AGLLKPTAAKLL---IGSFREKYPNILIH 868 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~-~~~~~~~~a~~l~~~Gad~i~i~D-t----~G~l~P~~~~~l---v~~lr~~~p~ipi~ 868 (1427)
.+.+-+..|-|=+ -|.++| +.+..++.++++.+.|||+|-|.= + ..+-..+++.++ |++|++.+|++||.
T Consensus 43 ~vMGIlNvTPDSF-sdgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpIS 121 (318)
T 2vp8_A 43 LIMAIVNRTPDSF-YDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLIS 121 (318)
T ss_dssp EEEEEEC---------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred EEEEEEeCCCCcc-cCCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEE
Confidence 4556666664411 134444 789999999999999999998872 1 123334555555 78888888899999
Q ss_pred EeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh------C-CC-CC------CCC---hhh--
Q psy15244 869 VHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN------T-DK-RC------GID---LHD-- 929 (1427)
Q Consensus 869 ~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~------~-g~-~t------gid---l~~-- 929 (1427)
+-+=+ ...+.+|+++|+++|+-...+ . .+.+-.+++-... . |. .. .+. -+-
T Consensus 122 IDT~~-----~~VaeaAl~aGa~iINDVsg~----~-d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ 191 (318)
T 2vp8_A 122 VDTWR-----AQVAKAACAAGADLINDTWGG----V-DPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVD 191 (318)
T ss_dssp EECSC-----HHHHHHHHHHTCCEEEETTSS----S-STTHHHHHHHHTCEEEEECC-------------CCSCHHHHHH
T ss_pred EeCCC-----HHHHHHHHHhCCCEEEECCCC----C-chHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHH
Confidence 96655 456678999999999754332 1 4566555554431 1 11 10 010 011
Q ss_pred --HHHHHHHHHHHhCCCCCCCCcccccchhhhhHHHHHHHHHHhhhhcCCCCCCCCCcCcccEEEecCCC
Q psy15244 930 --VCDYSSYWRKVRELYAPAHNLLWRCGIDLHDVCDYSSYWRKVRELYAPFECTDLKAASSEAYLYEIPG 997 (1427)
Q Consensus 930 --L~~l~~~v~~~~g~~~~~~kpivG~~~f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~~~v~~~~~pG 997 (1427)
+..+.+.++.....-++.++=++--++.--+...|.-.+.+.-..+..+.+|-+.|.++.-+++++-|
T Consensus 192 ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt~~~nl~ll~~l~~l~~lg~PvL~G~SrKsfig~~~g 261 (318)
T 2vp8_A 192 AVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLG 261 (318)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHHHHHTTSSCBEECCC----------
T ss_pred HHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccCHHHHHHHHHHHHHHHhCCCCEEEEeCcchhhhhhcC
Confidence 23334445555555555555333222211223344444444434445566677888887777776654
No 174
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=93.87 E-value=0.85 Score=51.95 Aligned_cols=206 Identities=15% Similarity=0.124 Sum_probs=110.9
Q ss_pred eEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCC--CCcee
Q psy15244 659 ILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIP--NIPFQ 736 (1427)
Q Consensus 659 v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p--~~~~q 736 (1427)
+.+|--+|=||.+. ++.+..++.|..+-+ .|.+.|+++|-+|--.+-.--.+..|+|+..+-+.+. +++++
T Consensus 35 lNvTPDSFsdgg~~-----~~~~~a~~~a~~~v~--~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiS 107 (294)
T 2dqw_A 35 LNLTPDSFSDGGRY-----LDPERALERAREMVA--EGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVS 107 (294)
T ss_dssp EECCC------------------CCHHHHHHHHH--HTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEE
T ss_pred EeCCCCCCCCCCCC-----CCHHHHHHHHHHHHH--CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEE
Confidence 34555557788763 455777777777766 6999999998555322222223566777644433332 55554
Q ss_pred eeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCC--
Q psy15244 737 MILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNK-- 814 (1427)
Q Consensus 737 ml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~-- 814 (1427)
.= .+ .-+.+++|.++|.+++.=.... +.....+.+++.|. -+. .+.+. + +.|..
T Consensus 108 ID----------T~----~~~Va~aAl~aGa~iINdVsg~----~d~~m~~v~a~~~~---~vV-lmh~~-e-G~p~tm~ 163 (294)
T 2dqw_A 108 VD----------TR----KPEVAEEALKLGAHLLNDVTGL----RDERMVALAARHGV---AAV-VMHMP-V-PDPATMM 163 (294)
T ss_dssp EE----------CS----CHHHHHHHHHHTCSEEECSSCS----CCHHHHHHHHHHTC---EEE-EECCS-S-SCTTTGG
T ss_pred EE----------CC----CHHHHHHHHHhCCCEEEECCCC----CChHHHHHHHHhCC---CEE-EEcCC-C-CCCcccc
Confidence 32 12 2334678888899977644444 23345666777777 221 11221 0 23321
Q ss_pred --CCCC------HHHHHHHHHHHHHCCCCEEEEccc-cCcCC-HHHHHHHHHHHHHHc-CCceEEEeecC----------
Q psy15244 815 --KKYS------LNYYEDLAKQLVESGAQVLCLKDM-AGLLK-PTAAKLLIGSFREKY-PNILIHVHTHD---------- 873 (1427)
Q Consensus 815 --~~~~------~~~~~~~a~~l~~~Gad~i~i~Dt-~G~l~-P~~~~~lv~~lr~~~-p~ipi~~H~Hn---------- 873 (1427)
..|+ .+++.+.++.+.++|+..|.| |. .|..+ ..+-.++++.+++-. ++.|+-+=.-|
T Consensus 164 ~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~Iil-DPG~Gf~kt~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfig~l~g~ 242 (294)
T 2dqw_A 164 AHARYRDVVAEVKAFLEAQARRALSAGVPQVVL-DPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGV 242 (294)
T ss_dssp GGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEEE-ECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHHTC
T ss_pred ccCccccHHHHHHHHHHHHHHHHHHCCCCcEEE-cCCCCcccCHHHHHHHHHHHHHHhcCCCCEEEEeccchhhhhhcCC
Confidence 1233 678889999999999985544 54 35555 567778888886542 47776553222
Q ss_pred -----CcchHHHHHHHHHHhcCCEEEec
Q psy15244 874 -----MAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 874 -----d~GlA~An~laAi~AGad~VD~a 896 (1427)
-.....+.+..|+++|++++.+-
T Consensus 243 p~~~~R~~~t~a~~~~a~~~Ga~IvRvH 270 (294)
T 2dqw_A 243 EDPAQRVHGSVAAHLFAVMKGVRLLRVH 270 (294)
T ss_dssp CSGGGCHHHHHHHHHHHHHTTCCEEEES
T ss_pred CchhhhHHHHHHHHHHHHHcCCcEEEcC
Confidence 12233466678899999998765
No 175
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=93.72 E-value=0.17 Score=55.71 Aligned_cols=156 Identities=16% Similarity=0.145 Sum_probs=104.3
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
-+.++..++++.|-+ .|+..||+. +-.++..+.++.+++.+|+..+ |...| . + .+
T Consensus 43 ~~~~~a~~~a~al~~--gGi~~iEvt----------~~t~~a~e~I~~l~~~~~~~~i-----GaGTV-----l-t--~~ 97 (232)
T 4e38_A 43 DNAEDIIPLGKVLAE--NGLPAAEIT----------FRSDAAVEAIRLLRQAQPEMLI-----GAGTI-----L-N--GE 97 (232)
T ss_dssp SSGGGHHHHHHHHHH--TTCCEEEEE----------TTSTTHHHHHHHHHHHCTTCEE-----EEECC-----C-S--HH
T ss_pred CCHHHHHHHHHHHHH--CCCCEEEEe----------CCCCCHHHHHHHHHHhCCCCEE-----eECCc-----C-C--HH
Confidence 345789999999988 799999984 2245677889999999886432 22112 1 1 34
Q ss_pred HHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q psy15244 758 FCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVL 837 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i 837 (1427)
.++.|+++|.+.+.. +-.+ ...++++++.|. .+-.. ..|+.. +.++.++|+|.|
T Consensus 98 ~a~~Ai~AGA~fIvs--P~~~----~~vi~~~~~~gi---~~ipG-------------v~TptE----i~~A~~~Gad~v 151 (232)
T 4e38_A 98 QALAAKEAGATFVVS--PGFN----PNTVRACQEIGI---DIVPG-------------VNNPST----VEAALEMGLTTL 151 (232)
T ss_dssp HHHHHHHHTCSEEEC--SSCC----HHHHHHHHHHTC---EEECE-------------ECSHHH----HHHHHHTTCCEE
T ss_pred HHHHHHHcCCCEEEe--CCCC----HHHHHHHHHcCC---CEEcC-------------CCCHHH----HHHHHHcCCCEE
Confidence 489999999999853 2223 345566777887 33221 133333 345578999998
Q ss_pred EEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCE
Q psy15244 838 CLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADI 892 (1427)
Q Consensus 838 ~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~ 892 (1427)
.+-=. +.+ .-.+++++++..+|++|+-- +-|....|+-..+++|+..
T Consensus 152 K~FPa-~~~---gG~~~lkal~~p~p~ip~~p----tGGI~~~n~~~~l~aGa~~ 198 (232)
T 4e38_A 152 KFFPA-EAS---GGISMVKSLVGPYGDIRLMP----TGGITPSNIDNYLAIPQVL 198 (232)
T ss_dssp EECST-TTT---THHHHHHHHHTTCTTCEEEE----BSSCCTTTHHHHHTSTTBC
T ss_pred EECcC-ccc---cCHHHHHHHHHHhcCCCeee----EcCCCHHHHHHHHHCCCeE
Confidence 87321 111 12378999998888888764 4566677888999999754
No 176
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.60 E-value=0.23 Score=47.42 Aligned_cols=96 Identities=11% Similarity=0.022 Sum_probs=62.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcC-CEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 56 TMEKILIANRSEVAIRVARACNEMG-IKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa~elG-i~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
++++|+|+|.|.++..+++.+.+.| +++++++.+++.........-..+.. ++.+.+.+.+..+ ++|.|
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--------d~~~~~~~~~~~~--~~d~v 73 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQV--------DAKDEAGLAKALG--GFDAV 73 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEEC--------CTTCHHHHHHHTT--TCSEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEe--------cCCCHHHHHHHHc--CCCEE
Confidence 4679999999999999999999999 88777765443211111111112221 2345566666654 68999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCC
Q psy15244 135 HPGYGFLSEREDFAKAVIGAGLEFIGPA 162 (1427)
Q Consensus 135 ~pg~gflsE~~~~a~~~e~~Gi~fiGps 162 (1427)
+-..++. ....+.+.+.+.|+.++-.+
T Consensus 74 i~~~~~~-~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 74 ISAAPFF-LTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp EECSCGG-GHHHHHHHHHHTTCEEECCC
T ss_pred EECCCch-hhHHHHHHHHHhCCCEEEec
Confidence 8776643 23467778888888776433
No 177
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=93.56 E-value=3.5 Score=45.54 Aligned_cols=213 Identities=10% Similarity=0.054 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHH----HHHHHhCCCCceeeeecccccccccCCCcchH
Q psy15244 680 TYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERL----AELRELIPNIPFQMILRGNSLVGYSNYSPAEV 755 (1427)
Q Consensus 680 t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl----~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv 755 (1427)
.++++.-+..+.. .|.+.+|.- .| |+.+..++.+ +.+|+...+.|+-.-+|...-=|.....++..
T Consensus 16 ~~e~~~~~~~~~~--~~~D~vElR----vD----~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 85 (238)
T 1sfl_A 16 IEETLIQKINHRI--DAIDVLELR----ID----QFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSY 85 (238)
T ss_dssp --CHHHHHHHHTT--TTCSEEEEE----CT----TSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHH
T ss_pred HHHHHHHHHHhhh--cCCCEEEEE----ec----ccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHH
Confidence 3556666666655 689999963 11 2332234443 45566555677777777543334445566667
Q ss_pred HHHHHHHHhc-CCCEEEEeccCC-hHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCC
Q psy15244 756 GAFCRLASQA-GIDIFRVFDPLN-SVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESG 833 (1427)
Q Consensus 756 ~~~v~~a~~~-Gid~~rif~~~n-d~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~G 833 (1427)
.+.++.+.+. ++|.+-|=...+ +-+.++..++.+++.|. .+- ++|- ||.. --+.+.+.++.+++.+.|
T Consensus 86 ~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~---kvI--~S~H-df~~----tp~~~el~~~~~~~~~~g 155 (238)
T 1sfl_A 86 LNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNK---EVI--ISHH-NFES----TPPLDELQFIFFKMQKFN 155 (238)
T ss_dssp HHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTC---EEE--EEEE-ESSC----CCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcCC---EEE--EEec-CCCC----CcCHHHHHHHHHHHHHcC
Confidence 7788888887 699988876652 44566777788887776 332 2343 3321 123688999999999999
Q ss_pred CCEEEEccccCcCCHHHHHHHHHHHHHH--cCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHH
Q psy15244 834 AQVLCLKDMAGLLKPTAAKLLIGSFREK--YPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGT 911 (1427)
Q Consensus 834 ad~i~i~Dt~G~l~P~~~~~lv~~lr~~--~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~ 911 (1427)
||++-|+=|+- .+.++..|..+..+. .++.|+-. -+.-.+|...=+.+--.|--+.-+++.. .--+||.+.++
T Consensus 156 aDivKia~~a~--~~~D~l~ll~~~~~~~~~~~~P~I~--~~MG~~G~~SRi~~~~~GS~~tf~~l~~-~sAPGQl~~~e 230 (238)
T 1sfl_A 156 PEYVKLAVMPH--NKNDVLNLLQAMSTFSDTMDCKVVG--ISMSKLGLISRTAQGVFGGALTYGCIGE-PQAPGQIDVTD 230 (238)
T ss_dssp CSEEEEEECCS--SHHHHHHHHHHHHHHHHHCSSEEEE--EECTGGGHHHHHTGGGGTBCEEEEBSSC-CSSTTCCBHHH
T ss_pred CCEEEEEecCC--CHHHHHHHHHHHHHHhhcCCCCEEE--EECCCCchHHHHHHHHhCCCeeecCCCC-CCCCCCCCHHH
Confidence 99999987764 477888887765542 24667433 3445566677777778888888888754 56789999999
Q ss_pred HHHHHH
Q psy15244 912 IVSCLE 917 (1427)
Q Consensus 912 vv~~L~ 917 (1427)
+...|+
T Consensus 231 l~~~l~ 236 (238)
T 1sfl_A 231 LKAQVT 236 (238)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 887764
No 178
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.49 E-value=0.088 Score=50.14 Aligned_cols=36 Identities=11% Similarity=0.148 Sum_probs=32.7
Q ss_pred CCceecCCCeEEEEEEecCCCEE-ecCCEEEEEEcCC
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQV-KKNDVLIVMSVMK 1392 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V-~~G~~l~~ieamK 1392 (1427)
...|.||..|+|.+++|++|+.| ..|++|+.|+...
T Consensus 50 ~~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i~~~~ 86 (98)
T 2dnc_A 50 VVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEEG 86 (98)
T ss_dssp EEEEECSSCEEEEECSSCTTCCCEESSCEEEEEECTT
T ss_pred eeEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEEecCC
Confidence 46799999999999999999998 9999999998643
No 179
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=93.49 E-value=0.32 Score=56.58 Aligned_cols=147 Identities=16% Similarity=0.238 Sum_probs=95.5
Q ss_pred ChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEecc-CChHHHHHHHHHHHHHhcCCC
Q psy15244 718 CPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDP-LNSVPNLVKGMDAVQQVTGGS 796 (1427)
Q Consensus 718 ~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~-~nd~~~~~~~i~~a~~~G~~~ 796 (1427)
-+|+.++.|.+.....-+..+.. |-+. ..++...+.|++.+.|-.. ++++.- ++++.+.|+
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st----------~fD~--~svd~l~~~~v~~~KI~S~~~~N~pL----L~~va~~gK-- 136 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICT----------PFDE--ESVDLIEAHGIEIIKIASCSFTDWPL----LERIARSDK-- 136 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEE----------ECSH--HHHHHHHHTTCCEEEECSSSTTCHHH----HHHHHTSCS--
T ss_pred CCHHHHHHHHHHHHHcCCcEEec----------cCCH--HHHHHHHHcCCCEEEECcccccCHHH----HHHHHhhCC--
Confidence 45666666666665554444432 1221 2366667889999988754 233443 344555677
Q ss_pred cEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-ccccCcCCHHHHHH--HHHHHHHHcCCceEEEeecC
Q psy15244 797 TIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCL-KDMAGLLKPTAAKL--LIGSFREKYPNILIHVHTHD 873 (1427)
Q Consensus 797 ~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i-~Dt~G~l~P~~~~~--lv~~lr~~~p~ipi~~H~Hn 873 (1427)
..|.-|| -.+++.+...++.+.+.|.+ |.| -=+.+.-+|..... .|..||+.+|++||++=-|-
T Consensus 137 ----PviLstG--------mstl~Ei~~Ave~i~~~g~~-viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt 203 (350)
T 3g8r_A 137 ----PVVASTA--------GARREDIDKVVSFMLHRGKD-LTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHE 203 (350)
T ss_dssp ----CEEEECT--------TCCHHHHHHHHHHHHTTTCC-EEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECC
T ss_pred ----cEEEECC--------CCCHHHHHHHHHHHHHcCCC-EEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCC
Confidence 2233343 46899999999988888876 455 23556666654433 47889999999999998888
Q ss_pred CcchHHHHHHHHHHhcCCEEEec
Q psy15244 874 MAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 874 d~GlA~An~laAi~AGad~VD~a 896 (1427)
+.+. .+.+++|+.+||++|..=
T Consensus 204 ~g~~-~~~~~AAvAlGA~vIEkH 225 (350)
T 3g8r_A 204 DPDL-MEPIMLAVAQGATVFEKH 225 (350)
T ss_dssp CSSC-CHHHHHHHHTTCCEEEEE
T ss_pred CCCc-cHHHHHHHHcCCCEEEEe
Confidence 6332 345689999999987653
No 180
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=93.48 E-value=0.1 Score=52.14 Aligned_cols=36 Identities=14% Similarity=0.145 Sum_probs=32.6
Q ss_pred CCceecCCCeEEEEEEecCCC-EEecCCEEEEEEcCC
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQ-QVKKNDVLIVMSVMK 1392 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd-~V~~G~~l~~ieamK 1392 (1427)
...|.||..|+|.+++|++|| .|+.||+|++|+.-.
T Consensus 70 ~~~I~Ap~~G~V~~i~v~~Gd~~V~~G~~L~~i~~~~ 106 (128)
T 1y8o_B 70 TIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKE 106 (128)
T ss_dssp EEEEECCSCEEEEEESSCTTCCSEETTCEEEEEESSG
T ss_pred eeEEeCCCCeEEEEEEeCCCCeeecCCCEEEEEecCc
Confidence 467999999999999999998 899999999998643
No 181
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=93.47 E-value=0.15 Score=59.42 Aligned_cols=64 Identities=27% Similarity=0.341 Sum_probs=53.4
Q ss_pred ceecCCCeEEEEEEecCCCEEecCCEEEEEEc----CCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEE
Q psy15244 1359 EIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSV----MKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVL 1425 (1427)
Q Consensus 1359 ~V~APm~G~v~~v~V~~Gd~V~~G~~l~~iea----mKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i 1425 (1427)
-+.||..|.+ ...++.|+.|++||+|+.+-. .+...+|+||.+|+|.-. ...-.|..|+.|+.|
T Consensus 259 ~~~a~~~G~~-~~~~~~g~~V~~G~~la~i~dp~~~G~~~~~v~Ap~dGiv~~~--~~~p~V~~Gd~l~~i 326 (332)
T 2qj8_A 259 QLKSPSPGIF-EPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAI--RSAMYVQGNEEVAIL 326 (332)
T ss_dssp EEECSSSEEE-EECSCTTCEECTTCEEEEEECTTCSSSCCEEEECSSSEEEEEE--ECSEEECTTCEEEEE
T ss_pred EEeCCCCeEE-EEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEeCCCeEEEEE--eCCCeeCCCCEEEEE
Confidence 4789999954 588999999999999999976 567889999999999644 466778888888876
No 182
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=93.38 E-value=5 Score=45.33 Aligned_cols=183 Identities=12% Similarity=0.078 Sum_probs=103.7
Q ss_pred EEEEEEEeeccCCCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEcccc---C---cCCHHHHHHH---HHHHHHHcCCceE
Q psy15244 798 IVEATICYAGDLTNPNKKKY-SLNYYEDLAKQLVESGAQVLCLKDMA---G---LLKPTAAKLL---IGSFREKYPNILI 867 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~-~~~~~~~~a~~l~~~Gad~i~i~Dt~---G---~l~P~~~~~l---v~~lr~~~p~ipi 867 (1427)
.+.+-+..|-|=++ |.+++ +.+..++.++++.+.|||+|-|.=-. | +...+++.++ |+++++. ++||
T Consensus 7 ~imgilN~TpDSFs-dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~pi 83 (280)
T 1eye_A 7 QVMGVLNVTDDSFS-DGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITV 83 (280)
T ss_dssp EEEEEEECSCCTTC-SSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCE
T ss_pred EEEEEEeCCCCCcC-CCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEE
Confidence 45666676654222 34444 79999999999999999999887211 1 1112444444 4555543 7999
Q ss_pred EEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh------C-CCCC-------CC-Chh--hH
Q psy15244 868 HVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN------T-DKRC-------GI-DLH--DV 930 (1427)
Q Consensus 868 ~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~------~-g~~t-------gi-dl~--~L 930 (1427)
.+++.+ ...+.+|+++|+++|+-...+ ..-+.+-.+++-... . |... .+ |.- -+
T Consensus 84 SIDT~~-----~~va~aAl~aGa~iINdvsg~----~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~ 154 (280)
T 1eye_A 84 SIDTMR-----ADVARAALQNGAQMVNDVSGG----RADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVR 154 (280)
T ss_dssp EEECSC-----HHHHHHHHHTTCCEEEETTTT----SSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHH
T ss_pred EEeCCC-----HHHHHHHHHcCCCEEEECCCC----CCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHH
Confidence 999987 566779999999999754432 234556555554431 1 1111 11 111 14
Q ss_pred HHHHHHHHHHhCCCCCCCC----cccccchhhhhHHHHHHHHHHhhhhcCCCCCCCCCcCcccEEEecCC
Q psy15244 931 CDYSSYWRKVRELYAPAHN----LLWRCGIDLHDVCDYSSYWRKVRELYAPFECTDLKAASSEAYLYEIP 996 (1427)
Q Consensus 931 ~~l~~~v~~~~g~~~~~~k----pivG~~~f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~~~v~~~~~p 996 (1427)
..+.+.++.....-+++++ |.+| |.. ...|.-.+.+.-..+..+.+|-+.|.++.-+++++-
T Consensus 155 ~~l~~~i~~a~~~Gi~~~~IilDPg~G---f~k-~~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfi~~~~ 220 (280)
T 1eye_A 155 ADLLASVADAVAAGVDPARLVLDPGLG---FAK-TAQHNWAILHALPELVATGIPVLVGASRKRFLGALL 220 (280)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCTT---SSC-CHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHT
T ss_pred HHHHHHHHHHHHcCCChhhEEEECCCC---ccc-CHHHHHHHHHHHHHhhcCCCCEEEEecchHHHHhhh
Confidence 4455556655555556555 4444 433 333444444433344446657777777765655554
No 183
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=93.22 E-value=0.095 Score=50.86 Aligned_cols=35 Identities=9% Similarity=0.045 Sum_probs=32.1
Q ss_pred CCceecCCCeEEEEEEecCCC-EEecCCEEEEEEcC
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQ-QVKKNDVLIVMSVM 1391 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd-~V~~G~~l~~ieam 1391 (1427)
...|.||..|+|.+++|++|+ .|..|++|++|+.-
T Consensus 50 ~~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~i~~~ 85 (108)
T 2dne_A 50 TVGFESLEECYMAKILVAEGTRDVPIGAIICITVGK 85 (108)
T ss_dssp EEEEECSSSEEEEECSSCTTCCSEETTCEEEEEESC
T ss_pred eeEEeCCCCEEEEEEEeCCCCeeecCCCEEEEEecC
Confidence 467999999999999999999 89999999999864
No 184
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=93.09 E-value=2.9 Score=47.27 Aligned_cols=204 Identities=14% Similarity=0.077 Sum_probs=116.3
Q ss_pred EeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCC--CCceeee
Q psy15244 661 LTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIP--NIPFQMI 738 (1427)
Q Consensus 661 i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p--~~~~qml 738 (1427)
+|--+|=||.+. ++.+..++.|..+-+ .|.+.|.++|-+|-..+-.--.+..|+|+..+-+.+. +++++.=
T Consensus 14 ~TpDSFsdgg~~-----~~~~~a~~~a~~~v~--~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSID 86 (280)
T 1eye_A 14 VTDDSFSDGGCY-----LDLDDAVKHGLAMAA--AGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSID 86 (280)
T ss_dssp CSCCTTCSSCCC-----CSHHHHHHHHHHHHH--TTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCcCCCccc-----CCHHHHHHHHHHHHH--CCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEe
Confidence 344456788652 567889999988887 7999999998554322222223455776543333322 5555432
Q ss_pred ecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCC----
Q psy15244 739 LRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNK---- 814 (1427)
Q Consensus 739 ~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~---- 814 (1427)
. + .-+.+++|.++|.++|.=....+..+ ..++.+++.|. -+. .+.+. +.|..
T Consensus 87 T----------~----~~~va~aAl~aGa~iINdvsg~~~d~---~m~~~~a~~~~---~vV-lmh~~---G~p~tm~~~ 142 (280)
T 1eye_A 87 T----------M----RADVARAALQNGAQMVNDVSGGRADP---AMGPLLAEADV---PWV-LMHWR---AVSADTPHV 142 (280)
T ss_dssp C----------S----CHHHHHHHHHTTCCEEEETTTTSSCT---THHHHHHHHTC---CEE-EECCC---CSCTTCTTS
T ss_pred C----------C----CHHHHHHHHHcCCCEEEECCCCCCCH---HHHHHHHHhCC---eEE-EEcCC---CCCcchhhc
Confidence 2 2 23347788889999987555554222 34556677777 221 12222 23321
Q ss_pred -CCCC------HHHHHHHHHHHHHCCCC--EEEEccc-cCcC-CHHHHHHHHHHHHHHc-CCceEEEeecC---------
Q psy15244 815 -KKYS------LNYYEDLAKQLVESGAQ--VLCLKDM-AGLL-KPTAAKLLIGSFREKY-PNILIHVHTHD--------- 873 (1427)
Q Consensus 815 -~~~~------~~~~~~~a~~l~~~Gad--~i~i~Dt-~G~l-~P~~~~~lv~~lr~~~-p~ipi~~H~Hn--------- 873 (1427)
..|. .+++.+.++.+.++|+. .|.| |. .|.. +..+-.++++.+++-- ++.|+-+=.-|
T Consensus 143 ~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~Iil-DPg~Gf~k~~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfi~~~~~ 221 (280)
T 1eye_A 143 PVRYGNVVAEVRADLLASVADAVAAGVDPARLVL-DPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLA 221 (280)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHTC
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEE-ECCCCcccCHHHHHHHHHHHHHhhcCCCCEEEEecchHHHHhhhc
Confidence 1232 78899999999999987 4444 43 2433 3456677777776431 47776553322
Q ss_pred -----------CcchHHHHHHHHHHhcCCEEEec
Q psy15244 874 -----------MAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 874 -----------d~GlA~An~laAi~AGad~VD~a 896 (1427)
-.+...|.+..|++.||++|.+.
T Consensus 222 ~~~g~~~~~~~R~~~t~a~~~~a~~~Ga~Ivrvh 255 (280)
T 1eye_A 222 GPDGVMRPTDGRDTATAVISALAALHGAWGVRVH 255 (280)
T ss_dssp CSSSCCCCGGGGHHHHHHHHHHHHHTTCSEEEES
T ss_pred cccCCCCCcccchHHHHHHHHHHHHcCCCEEEeC
Confidence 12234556668889999998765
No 185
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.86 E-value=0.94 Score=49.89 Aligned_cols=171 Identities=14% Similarity=0.083 Sum_probs=105.1
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
-+..++.++|....+ .|...|++++ .+.++.+|+.. +.|+-.+.|- ..-|+.-+.+.. .+
T Consensus 33 ~~~~~~~~~A~a~~~--~Ga~~i~~~~---------------~~~i~~ir~~v-~~Pvig~~k~-d~~~~~~~I~~~-~~ 92 (232)
T 3igs_A 33 DKPEIVAAMALAAEQ--AGAVAVRIEG---------------IDNLRMTRSLV-SVPIIGIIKR-DLDESPVRITPF-LD 92 (232)
T ss_dssp CSHHHHHHHHHHHHH--TTCSEEEEES---------------HHHHHHHHTTC-CSCEEEECBC-CCSSCCCCBSCS-HH
T ss_pred CCcchHHHHHHHHHH--CCCeEEEECC---------------HHHHHHHHHhc-CCCEEEEEee-cCCCcceEeCcc-HH
Confidence 346789999999998 7999888742 35678888775 4553212221 001111111111 22
Q ss_pred HHHHHHhcCCCEEEEeccC-ChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCE
Q psy15244 758 FCRLASQAGIDIFRVFDPL-NSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQV 836 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~-nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~ 836 (1427)
.++.+.+.|+|.+-+-... .+.+.+...++.+++.|. .+-+. .++. +.++.+.++|+|.
T Consensus 93 ~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~---~v~~~-------------v~t~----eea~~a~~~Gad~ 152 (232)
T 3igs_A 93 DVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHL---LTMAD-------------CSSV----DDGLACQRLGADI 152 (232)
T ss_dssp HHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTC---EEEEE-------------CCSH----HHHHHHHHTTCSE
T ss_pred HHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCC---EEEEe-------------CCCH----HHHHHHHhCCCCE
Confidence 4788999999988654432 123678888899998888 44321 2343 4467788999999
Q ss_pred EEEc--cc-cC--cCCHHHHHHHHHHHHHHcCCceEEEeecCCcchH-HHHHHHHHHhcCCEEEec
Q psy15244 837 LCLK--DM-AG--LLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTG-VATTLACVKAGADIVDVA 896 (1427)
Q Consensus 837 i~i~--Dt-~G--~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA-~An~laAi~AGad~VD~a 896 (1427)
|.+. +. .+ ...| -.++++.+++. ++|+-.= .|.. ..+..+++++||+.|=+.
T Consensus 153 Ig~~~~g~t~~~~~~~~--~~~~i~~l~~~--~ipvIA~----GGI~t~~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 153 IGTTMSGYTTPDTPEEP--DLPLVKALHDA--GCRVIAE----GRYNSPALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp EECTTTTSSSSSCCSSC--CHHHHHHHHHT--TCCEEEE----SCCCSHHHHHHHHHTTCSEEEEC
T ss_pred EEEcCccCCCCCCCCCC--CHHHHHHHHhc--CCcEEEE----CCCCCHHHHHHHHHcCCCEEEEe
Confidence 9642 11 01 1122 24667777765 6776543 3543 577888889999988554
No 186
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=92.86 E-value=0.77 Score=54.04 Aligned_cols=186 Identities=13% Similarity=0.145 Sum_probs=117.9
Q ss_pred CHHHHHHHHHHHHhhcCCccEEecc--CCCc--------hhhh-------hhccc--cChHHHHHHHHHhCCCCceeeee
Q psy15244 679 RTYDLKKVSPFVANRFNNLYSLEMW--GGAV--------SHTC-------LKFLK--ECPWERLAELRELIPNIPFQMIL 739 (1427)
Q Consensus 679 ~t~d~l~ia~~l~~~~~G~~~iE~~--ggat--------fd~~-------~rfl~--e~p~erl~~lr~~~p~~~~qml~ 739 (1427)
+.+..+++++...+ +|.+.+=.. -+-+ |+.. +..+. +-+|+.++.|.+.....-+..+.
T Consensus 42 sle~A~~li~~Ak~--aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~s 119 (385)
T 1vli_A 42 KLDQAFALIDAAAE--AGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLS 119 (385)
T ss_dssp CHHHHHHHHHHHHH--HTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEEC
T ss_pred cHHHHHHHHHHHHH--hCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEE
Confidence 45778888888877 688776542 1111 2100 00011 34667777777666555544443
Q ss_pred cccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCH
Q psy15244 740 RGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSL 819 (1427)
Q Consensus 740 Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~ 819 (1427)
. |-+.. .++...+.|+|.+.|-.. ++.|+. .++++.+.|+ ..|.-|| -.++
T Consensus 120 t----------pfD~~--svd~l~~~~vd~~KIgS~--~~~N~p-LL~~va~~gK------PViLStG--------maTl 170 (385)
T 1vli_A 120 T----------VCDEG--SADLLQSTSPSAFKIASY--EINHLP-LLKYVARLNR------PMIFSTA--------GAEI 170 (385)
T ss_dssp B----------CCSHH--HHHHHHTTCCSCEEECGG--GTTCHH-HHHHHHTTCS------CEEEECT--------TCCH
T ss_pred c----------cCCHH--HHHHHHhcCCCEEEECcc--cccCHH-HHHHHHhcCC------eEEEECC--------CCCH
Confidence 2 22322 366677788998888654 222322 2444555677 2334443 4699
Q ss_pred HHHHHHHHHHHHCCCCEEEEc-cccCcCCHHHHHHH--HHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 820 NYYEDLAKQLVESGAQVLCLK-DMAGLLKPTAAKLL--IGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 820 ~~~~~~a~~l~~~Gad~i~i~-Dt~G~l~P~~~~~l--v~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
+.+...++.+.+.|.+.|.|+ =+.+.=+|.....| |..||+.+|++||++=.|-+ |- .+.++||+.+||++|..=
T Consensus 171 ~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdHt~-G~-~~~~~AAvAlGA~iIEkH 248 (385)
T 1vli_A 171 SDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSE-HP-TEAPCAAVRLGAKLIEKH 248 (385)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCS-SS-SHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCCCC-Cc-hHHHHHHHHcCCCEEEeC
Confidence 999999999999998655553 25555556555555 88999999889999977764 42 777899999999998765
Q ss_pred c
Q psy15244 897 A 897 (1427)
Q Consensus 897 v 897 (1427)
+
T Consensus 249 f 249 (385)
T 1vli_A 249 F 249 (385)
T ss_dssp B
T ss_pred C
Confidence 4
No 187
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=92.79 E-value=0.54 Score=54.34 Aligned_cols=97 Identities=16% Similarity=0.121 Sum_probs=64.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEecCCCccCcccc----c-cceEEEcCCCCCcccCCCCHHHHHHHHHhcC
Q psy15244 57 MEKILIANR-SEVAIRVARACNEMGIKSVGIYSEQDKFSAHRT----K-VDQAFLVGKGMPPVAAYLNIPEIICIAKNNN 130 (1427)
Q Consensus 57 ~kkVLIagr-Geia~riiraa~elGi~~vav~s~~d~~s~~~~----~-aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~ 130 (1427)
+++|||.|. |.++..+++.+.+.|++++++..+......... + .+....+ ..++.|.+.+.++.++.+
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~------~~Dl~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIV------YGLINEQEAMEKILKEHE 83 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEE------ECCTTCHHHHHHHHHHTT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEE------EeecCCHHHHHHHHhhCC
Confidence 468999995 999999999999999999888765522110000 0 0111111 124567899999999889
Q ss_pred CCEEEeCCCccc--ccHHHHHHHHHCC-Ccee
Q psy15244 131 VDAIHPGYGFLS--EREDFAKAVIGAG-LEFI 159 (1427)
Q Consensus 131 vDaI~pg~gfls--E~~~~a~~~e~~G-i~fi 159 (1427)
+|.|+-..+... ....+.++|.+.| ++.+
T Consensus 84 ~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 84 IDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred CCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 999998766421 1235777888888 6644
No 188
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=92.70 E-value=0.029 Score=51.18 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=31.1
Q ss_pred CCceecCCCeEEEEEEecCCCEEecCCEEEEEEc
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSV 1390 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~iea 1390 (1427)
...|.||..|+|.++++++|+.|..|++|+.|+.
T Consensus 45 ~~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 45 VLEVPASADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred EEEEECCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 4689999999999999999999999999998763
No 189
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=92.68 E-value=0.087 Score=47.80 Aligned_cols=34 Identities=29% Similarity=0.533 Sum_probs=31.5
Q ss_pred CCceecCCCeEEEEEEecCCCEEecCCEEEEEEc
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSV 1390 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~iea 1390 (1427)
...|.||..|+|.+++|++|+.|..|++|+.|+.
T Consensus 41 ~~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~~ 74 (79)
T 1iyu_A 41 SMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEP 74 (79)
T ss_dssp EEEEECSSSSEEEEESCCTTCEEETTSEEEEEEC
T ss_pred EEEEECCCCEEEEEEEeCCCCEECCCCEEEEEec
Confidence 3579999999999999999999999999999875
No 190
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=92.49 E-value=2.9 Score=44.56 Aligned_cols=159 Identities=14% Similarity=0.072 Sum_probs=100.1
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCC-CCceeeeecccccccccCCCcchHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIP-NIPFQMILRGNSLVGYSNYSPAEVG 756 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p-~~~~qml~Rg~n~vgy~~~~~nvv~ 756 (1427)
.+.++..++++.+.+ .|+..||+.... .+..+.++.+|+..| +..+.. |-. .+.-
T Consensus 19 ~~~~~~~~~~~~~~~--~G~~~iev~~~~----------~~~~~~i~~ir~~~~~~~~ig~--------~~v---~~~~- 74 (205)
T 1wa3_A 19 NSVEEAKEKALAVFE--GGVHLIEITFTV----------PDADTVIKELSFLKEKGAIIGA--------GTV---TSVE- 74 (205)
T ss_dssp SSHHHHHHHHHHHHH--TTCCEEEEETTS----------TTHHHHHHHTHHHHHTTCEEEE--------ESC---CSHH-
T ss_pred CCHHHHHHHHHHHHH--CCCCEEEEeCCC----------hhHHHHHHHHHHHCCCCcEEEe--------ccc---CCHH-
Confidence 466888999999988 799999985321 123345777777765 332221 100 1211
Q ss_pred HHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCE
Q psy15244 757 AFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQV 836 (1427)
Q Consensus 757 ~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~ 836 (1427)
.++.+.+.|.|.+ +....+ ...++.+++.|. .+-.. .+|... ++.+.++|+|.
T Consensus 75 -~~~~a~~~Gad~i-v~~~~~-----~~~~~~~~~~g~---~vi~g-------------~~t~~e----~~~a~~~Gad~ 127 (205)
T 1wa3_A 75 -QCRKAVESGAEFI-VSPHLD-----EEISQFCKEKGV---FYMPG-------------VMTPTE----LVKAMKLGHTI 127 (205)
T ss_dssp -HHHHHHHHTCSEE-ECSSCC-----HHHHHHHHHHTC---EEECE-------------ECSHHH----HHHHHHTTCCE
T ss_pred -HHHHHHHcCCCEE-EcCCCC-----HHHHHHHHHcCC---cEECC-------------cCCHHH----HHHHHHcCCCE
Confidence 2678889999999 443332 346778888888 33221 133333 45668899998
Q ss_pred EEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 837 LCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 837 i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
+.+-.. .+ .-.++++.+++.+|++||..=.--+ ..|..+.+++||+.|-+.
T Consensus 128 vk~~~~----~~-~g~~~~~~l~~~~~~~pvia~GGI~----~~~~~~~~~~Ga~~v~vG 178 (205)
T 1wa3_A 128 LKLFPG----EV-VGPQFVKAMKGPFPNVKFVPTGGVN----LDNVCEWFKAGVLAVGVG 178 (205)
T ss_dssp EEETTH----HH-HHHHHHHHHHTTCTTCEEEEBSSCC----TTTHHHHHHHTCSCEEEC
T ss_pred EEEcCc----cc-cCHHHHHHHHHhCCCCcEEEcCCCC----HHHHHHHHHCCCCEEEEC
Confidence 876321 11 1235677788777788886654333 357788889999987554
No 191
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.48 E-value=0.18 Score=50.66 Aligned_cols=117 Identities=10% Similarity=0.023 Sum_probs=67.8
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCE
Q psy15244 54 PKTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDA 133 (1427)
Q Consensus 54 ~~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDa 133 (1427)
..+.++|+|+|.|.++..+++.+++.|+++++++.+++........ +..+..+ +..+.+ +++-+.-.++|+
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-g~~~i~g-------d~~~~~-~l~~a~i~~ad~ 74 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-GVRAVLG-------NAANEE-IMQLAHLECAKW 74 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-TCEEEES-------CTTSHH-HHHHTTGGGCSE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-CCCEEEC-------CCCCHH-HHHhcCcccCCE
Confidence 3567899999999999999999999999999998876643222211 2222222 113333 334344456898
Q ss_pred EEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCC
Q psy15244 134 IHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVP 185 (1427)
Q Consensus 134 I~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVp 185 (1427)
|+...+...+|...+..+... .|....+....|.... +.++++|+.
T Consensus 75 vi~~~~~~~~n~~~~~~a~~~-----~~~~~iiar~~~~~~~-~~l~~~G~d 120 (140)
T 3fwz_A 75 LILTIPNGYEAGEIVASARAK-----NPDIEIIARAHYDDEV-AYITERGAN 120 (140)
T ss_dssp EEECCSCHHHHHHHHHHHHHH-----CSSSEEEEEESSHHHH-HHHHHTTCS
T ss_pred EEEECCChHHHHHHHHHHHHH-----CCCCeEEEEECCHHHH-HHHHHCCCC
Confidence 887766544444333333332 1122223344444333 455667765
No 192
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=92.36 E-value=0.074 Score=50.68 Aligned_cols=35 Identities=26% Similarity=0.422 Sum_probs=32.2
Q ss_pred CceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1392 KTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1392 Kme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
.-+..|.||.+|+|.++++++|+.|++||+|++|+
T Consensus 12 ~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie 46 (99)
T 2ejm_A 12 ETQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMI 46 (99)
T ss_dssp SCCSSCBCSSSEEEEEECCCTTEEECSSCEEEEEE
T ss_pred CCceEEecCCCEEEEEEECCCCCEECCCCEEEEEE
Confidence 44567999999999999999999999999999987
No 193
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=92.32 E-value=0.051 Score=49.58 Aligned_cols=34 Identities=29% Similarity=0.565 Sum_probs=31.3
Q ss_pred CCceecCCCeEEEEEEecCCCEEecCCEEEEEEc
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSV 1390 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~iea 1390 (1427)
...|.||+.|+|.++++++|+.|..|++|+.|+.
T Consensus 44 ~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (81)
T 1gjx_A 44 TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEA 77 (81)
T ss_dssp EEEECCCCSSBBCCCCCCSSCEECSSSCCCEECC
T ss_pred EEEEECCCCEEEEEEecCCCCEeCCCCEEEEEEe
Confidence 4679999999999999999999999999998864
No 194
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=92.18 E-value=1.4 Score=50.58 Aligned_cols=106 Identities=21% Similarity=0.304 Sum_probs=67.5
Q ss_pred EEEEEEEeeccCCCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEccccCcCCH--------HHHH---HHHHHHHHHcCCc
Q psy15244 798 IVEATICYAGDLTNPNKKKY-SLNYYEDLAKQLVESGAQVLCLKDMAGLLKP--------TAAK---LLIGSFREKYPNI 865 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~-~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P--------~~~~---~lv~~lr~~~p~i 865 (1427)
.+.+-+..|-|=+ -|.++| +.+..++.++++.+.|||+|-|.=- ...| ++.. .+|++|++.+ ++
T Consensus 11 ~iMGIlNvTPDSF-sdgg~~~~~~~a~~~a~~~v~~GAdIIDIGge--STrPGa~~v~~~eE~~Rv~pvI~~l~~~~-~v 86 (314)
T 2vef_A 11 VICGIINVTPDSF-SDGGQFFALEQALQQARKLIAEGASMLDIGGE--STRPGSSYVEIEEEIQRVVPVIKAIRKES-DV 86 (314)
T ss_dssp EEEEEEECCC----------CHHHHHHHHHHHHHHTTCSEEEEECC--C-----CHHHHHHHHHHHHHHHHHHHHHC-CC
T ss_pred eEEEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC--cCCCCCCCCCHHHHHHHHHHHHHHHHhhC-Cc
Confidence 5667777775521 244565 7899999999999999999977521 1224 4444 4556688776 89
Q ss_pred eEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHH
Q psy15244 866 LIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCL 916 (1427)
Q Consensus 866 pi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L 916 (1427)
||.+-+=+ ...+.+|+++|+++|+--..+ ..-+.+-.+++-.
T Consensus 87 piSIDT~~-----~~Va~aAl~aGa~iINDVsg~----~~d~~m~~v~a~~ 128 (314)
T 2vef_A 87 LISIDTWK-----SQVAEAALAAGADLVNDITGL----MGDEKMPHVVAEA 128 (314)
T ss_dssp EEEEECSC-----HHHHHHHHHTTCCEEEETTTT----CSCTTHHHHHHHH
T ss_pred eEEEeCCC-----HHHHHHHHHcCCCEEEECCCC----CCChHHHHHHHHc
Confidence 99996655 456679999999999744322 2346776676544
No 195
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=92.14 E-value=5.5 Score=42.92 Aligned_cols=187 Identities=10% Similarity=0.044 Sum_probs=111.4
Q ss_pred EEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeee
Q psy15244 660 LLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMIL 739 (1427)
Q Consensus 660 ~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~ 739 (1427)
+|+-|-...|+ ++ -..++..++|+.+.+ .|...+++.+ .+.++.+++.. +.+++.+.
T Consensus 7 ~~~~~q~~~~~--p~---~~~~~~~~~a~~~~~--~Ga~~i~~~~---------------~~~i~~i~~~~-~~pv~~~~ 63 (223)
T 1y0e_A 7 LIVSCQALPDE--PL---HSSFIMSKMALAAYE--GGAVGIRANT---------------KEDILAIKETV-DLPVIGIV 63 (223)
T ss_dssp EEEECCCCTTS--TT---CCHHHHHHHHHHHHH--HTCSEEEEES---------------HHHHHHHHHHC-CSCEEEEC
T ss_pred eEEEecCCCCC--CC---CCCccHHHHHHHHHH--CCCeeeccCC---------------HHHHHHHHHhc-CCCEEeee
Confidence 55666555443 22 133678889998888 6998887632 24577787765 56664433
Q ss_pred cccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCC-hH-HHHHHHHHHHHHh--cCCCcEEEEEEEeeccCCCCCCC
Q psy15244 740 RGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLN-SV-PNLVKGMDAVQQV--TGGSTIVEATICYAGDLTNPNKK 815 (1427)
Q Consensus 740 Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~n-d~-~~~~~~i~~a~~~--G~~~~~v~~~i~~t~d~~~p~~~ 815 (1427)
+-. .-+..-+..+ -...++.+.+.|.|.+.+-.... +. ..+.+.++.+++. |. .+-. .
T Consensus 64 ~~~-~~~~~~~i~~-~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~---~v~~----~--------- 125 (223)
T 1y0e_A 64 KRD-YDHSDVFITA-TSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNV---EIMA----D--------- 125 (223)
T ss_dssp BCC-CTTCCCCBSC-SHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTS---EEEE----E---------
T ss_pred ccC-CCccccccCC-cHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCc---eEEe----c---------
Confidence 311 0011111011 12347888899999987765431 11 2456778888887 76 4321 1
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccc------cCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcch-HHHHHHHHHHh
Q psy15244 816 KYSLNYYEDLAKQLVESGAQVLCLKDM------AGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGT-GVATTLACVKA 888 (1427)
Q Consensus 816 ~~~~~~~~~~a~~l~~~Gad~i~i~Dt------~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~Gl-A~An~laAi~A 888 (1427)
.++++. ++.+.++|+|.|.+.-. .+......-.++++.+++.+ ++||.. +-|. ...++..++++
T Consensus 126 ~~t~~e----~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~-~ipvia----~GGI~~~~~~~~~~~~ 196 (223)
T 1y0e_A 126 IATVEE----AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV-DAKVIA----EGNVITPDMYKRVMDL 196 (223)
T ss_dssp CSSHHH----HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC-CSEEEE----ESSCCSHHHHHHHHHT
T ss_pred CCCHHH----HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC-CCCEEE----ecCCCCHHHHHHHHHc
Confidence 244443 44578899998875311 11110222356788888887 788765 3466 57888889999
Q ss_pred cCCEEEec
Q psy15244 889 GADIVDVA 896 (1427)
Q Consensus 889 Gad~VD~a 896 (1427)
||+.|=+.
T Consensus 197 Gad~v~vG 204 (223)
T 1y0e_A 197 GVHCSVVG 204 (223)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99988554
No 196
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=92.11 E-value=0.063 Score=55.39 Aligned_cols=55 Identities=24% Similarity=0.280 Sum_probs=34.3
Q ss_pred EEecCCCEEecCCEEEEEEc--CC-----ceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1371 VKVKVGQQVKKNDVLIVMSV--MK-----TETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1371 v~V~~Gd~V~~G~~l~~iea--mK-----me~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
++|++||+|++||+|+.+.- .| +.+.+.-.- ..+..+....+..|..|+.|+.++
T Consensus 93 ~~V~~Gd~V~~G~~L~~~d~~~i~~~g~~~~t~vvvtn-~~~~~~~~~~~~~v~~g~~~~~~~ 154 (154)
T 2gpr_A 93 SFVTQDQEVNAGDKLVTVDLKSVAKKVPSIKSPIIFTN-NGGKTLEIVKMGEVKQGDVVAILK 154 (154)
T ss_dssp ECCCTTCEECTTCEEEEECHHHHHHHSSCCCEEEEEEE-CSSCCCSCBCCEEECTTCEEEEEC
T ss_pred EEEcCCCEEcCCCEEEEECHHHHHhcCCCCeEEEEEEC-CCcceEEEccCceEcCCCEEEEeC
Confidence 59999999999999998862 11 222221111 112223334567788899988763
No 197
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.08 E-value=0.15 Score=51.02 Aligned_cols=91 Identities=9% Similarity=0.012 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 56 TMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
++++|+|+|.|.++..+++.+.+.|+++++++.+++........ ...+..+ +..+.+.+.+ +.-.++|+|+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-~~~~~~g-------d~~~~~~l~~-~~~~~~d~vi 75 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-GFDAVIA-------DPTDESFYRS-LDLEGVSAVL 75 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-TCEEEEC-------CTTCHHHHHH-SCCTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCcEEEC-------CCCCHHHHHh-CCcccCCEEE
Confidence 36789999999999999999999999999998765532211111 1112222 1233333332 3334689988
Q ss_pred eCCCcccccHHHHHHHHHCC
Q psy15244 136 PGYGFLSEREDFAKAVIGAG 155 (1427)
Q Consensus 136 pg~gflsE~~~~a~~~e~~G 155 (1427)
...+....|...+..+.+.|
T Consensus 76 ~~~~~~~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 76 ITGSDDEFNLKILKALRSVS 95 (141)
T ss_dssp ECCSCHHHHHHHHHHHHHHC
T ss_pred EecCCHHHHHHHHHHHHHhC
Confidence 77764444444455555544
No 198
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=91.95 E-value=4.7 Score=45.35 Aligned_cols=193 Identities=11% Similarity=0.052 Sum_probs=115.0
Q ss_pred EeecC---cccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhC---CCCc
Q psy15244 661 LTDTT---FRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELI---PNIP 734 (1427)
Q Consensus 661 i~DtT---lRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~---p~~~ 734 (1427)
++++| |.||.+. .+.++.++.|..+.+ .|.+.|.+++++. .++.++|+..+-+.+ -+++
T Consensus 16 ilN~Tpdsf~dg~~~-----~~~~~a~~~a~~~v~--~GAdiIDIg~~s~--------~~eE~~rv~~vi~~l~~~~~~p 80 (271)
T 2yci_X 16 RINGMFKDIREAILN-----KDPRPIQEWARRQAE--KGAHYLDVNTGPT--------ADDPVRVMEWLVKTIQEVVDLP 80 (271)
T ss_dssp EEETTSHHHHHHHHT-----TCCHHHHHHHHHHHH--TTCSEEEEECCSC--------SSCHHHHHHHHHHHHHHHCCCC
T ss_pred ecCCChhhHHHhhhh-----CCHHHHHHHHHHHHH--CCCCEEEEcCCcC--------chhHHHHHHHHHHHHHHhCCCe
Confidence 66676 3455442 455888899988887 7999999998763 456788875433322 2555
Q ss_pred eeeeecccccccccCCCcchHHHHHHHHHhc--CCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCC
Q psy15244 735 FQMILRGNSLVGYSNYSPAEVGAFCRLASQA--GIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNP 812 (1427)
Q Consensus 735 ~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~--Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p 812 (1427)
++.=. + .-+.+++|+++ |.+++.=....+ +++...++.+++.|. -+ +.+.- ++
T Consensus 81 isIDT----------~----~~~v~~aal~a~~Ga~iINdvs~~~--d~~~~~~~~~a~~~~---~v---v~m~~---d~ 135 (271)
T 2yci_X 81 CCLDS----------T----NPDAIEAGLKVHRGHAMINSTSADQ--WKMDIFFPMAKKYEA---AI---IGLTM---NE 135 (271)
T ss_dssp EEEEC----------S----CHHHHHHHHHHCCSCCEEEEECSCH--HHHHHHHHHHHHHTC---EE---EEESC---BT
T ss_pred EEEeC----------C----CHHHHHHHHHhCCCCCEEEECCCCc--cccHHHHHHHHHcCC---CE---EEEec---CC
Confidence 55422 1 23346677777 999987444432 556677778888887 22 22221 11
Q ss_pred CCCCCC----HHHHHHHHHHHHHCCCCE--EEEccccCc--CCHHHHHHHHHHHHH---Hc-CCceEEEeecCC-cch--
Q psy15244 813 NKKKYS----LNYYEDLAKQLVESGAQV--LCLKDMAGL--LKPTAAKLLIGSFRE---KY-PNILIHVHTHDM-AGT-- 877 (1427)
Q Consensus 813 ~~~~~~----~~~~~~~a~~l~~~Gad~--i~i~Dt~G~--l~P~~~~~lv~~lr~---~~-p~ipi~~H~Hnd-~Gl-- 877 (1427)
.....+ .+++.+.++.+.++|+.. |.|==..|- -+.....++++.++. .. |+.|+-+=.+|- +|+
T Consensus 136 ~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l~~~~~~~~p~~p~l~G~Snksfg~~~ 215 (271)
T 2yci_X 136 KGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPAPRTVLGLSNVSQKCPD 215 (271)
T ss_dssp TBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHHHHHHHHHHHTTSSSSCCEEEEEGGGGGTTCSS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCHHHHHHHHHHHHHHHHhCCCCCCEEEeeCccccCCch
Confidence 111234 778888888999999873 544222232 134566667766664 34 568877755553 232
Q ss_pred ----HHHHHHHHHHhcCCEE
Q psy15244 878 ----GVATTLACVKAGADIV 893 (1427)
Q Consensus 878 ----A~An~laAi~AGad~V 893 (1427)
..+.+..|+.+|++.+
T Consensus 216 r~~l~~t~~~~a~~~g~~~~ 235 (271)
T 2yci_X 216 RPLINRTYLVMAMTAGLDAA 235 (271)
T ss_dssp HHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHhCCcE
Confidence 2223345666776643
No 199
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=91.86 E-value=1.1 Score=49.14 Aligned_cols=171 Identities=13% Similarity=0.114 Sum_probs=105.0
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
-+..++.++|....+ .|...|++++ .+.++.+|+.+ +.|+-.+.|- ..-++.-+.... .+
T Consensus 33 ~~~~~~~~~A~a~~~--~Ga~~i~~~~---------------~~~i~~ir~~v-~~Pvig~~k~-~~~~~~~~I~~~-~~ 92 (229)
T 3q58_A 33 DKPEIVAAMAQAAAS--AGAVAVRIEG---------------IENLRTVRPHL-SVPIIGIIKR-DLTGSPVRITPY-LQ 92 (229)
T ss_dssp CSHHHHHHHHHHHHH--TTCSEEEEES---------------HHHHHHHGGGC-CSCEEEECBC-CCSSCCCCBSCS-HH
T ss_pred CCcchHHHHHHHHHH--CCCcEEEECC---------------HHHHHHHHHhc-CCCEEEEEee-cCCCCceEeCcc-HH
Confidence 356789999999998 7999998742 35678888876 4553222221 001111111111 23
Q ss_pred HHHHHHhcCCCEEEEeccC-ChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCE
Q psy15244 758 FCRLASQAGIDIFRVFDPL-NSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQV 836 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~-nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~ 836 (1427)
.++.+.+.|+|.+-+-... .+.+.+...++.+++.|. .+-+. .++. +.++.+.++|+|.
T Consensus 93 ~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~---~v~~~-------------v~t~----eea~~a~~~Gad~ 152 (229)
T 3q58_A 93 DVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGL---LAMAD-------------CSTV----NEGISCHQKGIEF 152 (229)
T ss_dssp HHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTC---EEEEE-------------CSSH----HHHHHHHHTTCSE
T ss_pred HHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCC---EEEEe-------------cCCH----HHHHHHHhCCCCE
Confidence 4788999999988554332 123678888899998888 44321 2443 4467788999999
Q ss_pred EEEc--c-ccC--cCCHHHHHHHHHHHHHHcCCceEEEeecCCcchH-HHHHHHHHHhcCCEEEec
Q psy15244 837 LCLK--D-MAG--LLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTG-VATTLACVKAGADIVDVA 896 (1427)
Q Consensus 837 i~i~--D-t~G--~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA-~An~laAi~AGad~VD~a 896 (1427)
|.+. + |.+ ...| -.++++.+++. ++|+-.= .|.. ..++.+++++||+.|=+.
T Consensus 153 Ig~~~~g~t~~~~~~~~--~~~li~~l~~~--~ipvIA~----GGI~t~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 153 IGTTLSGYTGPITPVEP--DLAMVTQLSHA--GCRVIAE----GRYNTPALAANAIEHGAWAVTVG 210 (229)
T ss_dssp EECTTTTSSSSCCCSSC--CHHHHHHHHTT--TCCEEEE----SSCCSHHHHHHHHHTTCSEEEEC
T ss_pred EEecCccCCCCCcCCCC--CHHHHHHHHHc--CCCEEEE----CCCCCHHHHHHHHHcCCCEEEEc
Confidence 9642 1 111 1222 23677777764 6776543 3442 577788889999988554
No 200
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=91.81 E-value=0.13 Score=59.79 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=41.9
Q ss_pred EEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1368 IIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1368 v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
|....|+.|+.-..=..-..+++. -+..|.++.+|+|.+++|++||.|++||+|++|+
T Consensus 6 v~~~~v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld 63 (341)
T 3fpp_A 6 YQTLIVRPGDLQQSVLATGKLDAL-RKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVID 63 (341)
T ss_dssp -------CCCCCCEEEEEEEEEES-SEEECCCSSCEEEEEECCCTTCEECTTCEEEEEC
T ss_pred eEEEEEEEeceeEEEEEEEEEEee-EEEEEeccCCcEEEEEEeCCCCEECCCCEEEEEC
Confidence 444556666654444455667766 4778999999999999999999999999999986
No 201
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=91.78 E-value=12 Score=42.18 Aligned_cols=182 Identities=9% Similarity=0.096 Sum_probs=109.4
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccC--CCcchH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSN--YSPAEV 755 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~--~~~nvv 755 (1427)
.+.+|+.++++...+ -|+.++-+..+ .++..++.+.++.+.. ...+||-. .+..+.
T Consensus 71 ~T~~dI~~lc~eA~~--~g~aaVCV~P~----------------~V~~a~~~L~~s~V~V----~tVigFP~G~~~~~~K 128 (288)
T 3oa3_A 71 ATGSQIDVLCAEAKE--YGFATVCVRPD----------------YVSRAVQYLQGTQVGV----TCVIGFHEGTYSTDQK 128 (288)
T ss_dssp CCHHHHHHHHHHHHH--HTCSEEEECGG----------------GHHHHHHHTTTSSCEE----EEEESTTTSCSCHHHH
T ss_pred CCHHHHHHHHHHHHh--cCCcEEEECHH----------------HHHHHHHHcCCCCCeE----EEEeCCCCCCCcHHHH
Confidence 567888888887776 48888876521 2344555555443221 11356522 344555
Q ss_pred HHHHHHHHhcCCCEEEEeccCCh-----HHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHH
Q psy15244 756 GAFCRLASQAGIDIFRVFDPLNS-----VPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQL 829 (1427)
Q Consensus 756 ~~~v~~a~~~Gid~~rif~~~nd-----~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l 829 (1427)
-.-++.|++.|.|.|-+...... .+.+..-|..++++ +. ..+- .|--++ ..+.+.+...++.+
T Consensus 129 v~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~--~~lK-VIlEt~--------~Lt~eei~~A~~ia 197 (288)
T 3oa3_A 129 VSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKD--AILK-VILETS--------QLTADEIIAGCVLS 197 (288)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT--SEEE-EECCGG--------GCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcC--CCce-EEEECC--------CCCHHHHHHHHHHH
Confidence 55688899999999998776643 34555555555554 33 1222 222221 35778888999999
Q ss_pred HHCCCCEEEEcc--ccCcCCHHHHHHHHHHHHHHc-CCceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 830 VESGAQVLCLKD--MAGLLKPTAAKLLIGSFREKY-PNILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 830 ~~~Gad~i~i~D--t~G~l~P~~~~~lv~~lr~~~-p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
.++|||.|--.- +.|-.++.++.- ++.+.+.. +.++|-.=.--. ....+++-++|||+.|=+|
T Consensus 198 ~eaGADfVKTSTGf~~~GAT~edv~l-mr~~v~~~g~~v~VKAAGGIr---t~edAl~mi~aGA~RiGtS 263 (288)
T 3oa3_A 198 SLAGADYVKTSTGFNGPGASIENVSL-MSAVCDSLQSETRVKASGGIR---TIEDCVKMVRAGAERLGAS 263 (288)
T ss_dssp HHTTCSEEECCCSSSSCCCCHHHHHH-HHHHHHHSSSCCEEEEESSCC---SHHHHHHHHHTTCSEEEES
T ss_pred HHcCCCEEEcCCCCCCCCCCHHHHHH-HHHHHHHhCCCceEEEeCCCC---CHHHHHHHHHcCCceeehh
Confidence 999999876551 123567777654 44444332 345553322100 1377889999999998555
No 202
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=91.68 E-value=0.095 Score=54.50 Aligned_cols=55 Identities=18% Similarity=0.240 Sum_probs=33.5
Q ss_pred EecCCCEEecCCEEEEEEc--CC-----ceeeeecCCCeEEEEEEecCCCeeCCCC-EEEEEe
Q psy15244 1372 KVKVGQQVKKNDVLIVMSV--MK-----TETLIHASADGVVKEIFVEVGGQVAQND-LVVVLD 1426 (1427)
Q Consensus 1372 ~V~~Gd~V~~G~~l~~iea--mK-----me~~i~Ap~~G~V~~i~v~~G~~V~~g~-~L~~i~ 1426 (1427)
+|++||+|++||+|+.+.- .| +.+.+.-.-......+....+..|.+|+ +|+.+.
T Consensus 99 ~V~~Gd~V~~G~~L~~~d~~~i~~~g~~~~t~vvvtn~~~~~~~~~~~~~~v~~g~~~i~~~~ 161 (162)
T 1ax3_A 99 FVSEGDRVEPGQKLLEVDLDAVKPNVPSLMTPIVFTNLAEGETVSIKASGSVNREQEDIVKIE 161 (162)
T ss_dssp SCCCCSEECSEEEEEEECHHHHGGGSSCCCEEEEESSGGGTCEEEECCCSEECTTCSSSEEEE
T ss_pred EEeCCCEEcCCCEEEEECHHHHHhcCCCCEEEEEEECCcccceEEeccCceEecCCEEEEEEe
Confidence 8999999999999998852 22 3333332222222334455556677777 556553
No 203
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=91.60 E-value=2.3 Score=49.96 Aligned_cols=113 Identities=27% Similarity=0.291 Sum_probs=74.7
Q ss_pred HHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q psy15244 759 CRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLC 838 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~ 838 (1427)
+..|.+-|+.++.. --+.+.+...++.+|+.+. ..+.+.+. + .+ .+.+.++.+.++|+|.|.
T Consensus 64 ~avA~aGGlg~i~~---~~s~e~~~~~i~~vk~~~~--l~vga~vg-~----~~--------~~~~~~~~lieaGvd~I~ 125 (366)
T 4fo4_A 64 IALAQEGGIGFIHK---NMSIEQQAAQVHQVKISGG--LRVGAAVG-A----AP--------GNEERVKALVEAGVDVLL 125 (366)
T ss_dssp HHHHHTTCEEEECS---SSCHHHHHHHHHHHHTTTS--CCCEEECC-S----CT--------TCHHHHHHHHHTTCSEEE
T ss_pred HHHHHcCCceEeec---CCCHHHHHHHHHHHHhcCc--eeEEEEec-c----Ch--------hHHHHHHHHHhCCCCEEE
Confidence 34444566666543 2356777778888887653 12222211 1 11 245678899999999887
Q ss_pred EccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEe
Q psy15244 839 LKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 839 i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~ 895 (1427)
| ||++. .|....+.|+.+|+.+|+++|....= .....+.+++++|||.|.+
T Consensus 126 i-dta~G-~~~~~~~~I~~ik~~~p~v~Vi~G~v----~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 126 I-DSSHG-HSEGVLQRIRETRAAYPHLEIIGGNV----ATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp E-ECSCT-TSHHHHHHHHHHHHHCTTCEEEEEEE----CSHHHHHHHHHHTCSEEEE
T ss_pred E-eCCCC-CCHHHHHHHHHHHHhcCCCceEeeee----CCHHHHHHHHHcCCCEEEE
Confidence 6 55543 45677788999999999999866421 2345668899999999998
No 204
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=91.33 E-value=1.1 Score=52.68 Aligned_cols=164 Identities=16% Similarity=0.122 Sum_probs=86.6
Q ss_pred ccceeEeecccccccchhhhhccccc-----------------cccccccccccc--ccccccc-CCCeEEeecCcccCC
Q psy15244 611 KLKHVLLTDTTFRDAHQSLLATRVRT-----------------YDLKKVMMGAGE--FVNSVRK-LKHILLTDTTFRDAH 670 (1427)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~dl~~~~~~~~~--~~~~~~~-~~~v~i~DtTlRDG~ 670 (1427)
..+.+.|.|||.||+.|+.-. ..++ ++...+..+|.. +++.+.+ .++..|
T Consensus 9 ~~~~v~I~DtTLRDG~Q~~~~-~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i--------- 78 (370)
T 3rmj_A 9 QTNRVIIFDTTLRDGEQSPGA-AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTV--------- 78 (370)
T ss_dssp -CCBCEEEECCCCCCTTSTTC-CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCSSSEE---------
T ss_pred CCCCEEEEECCCCccccCCCC-CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCCCCeE---------
Confidence 356799999999999998754 2333 333333333321 1211221 111222
Q ss_pred CCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhh-hhccccChHHHHHHHHH---hCCCCceeeeeccccccc
Q psy15244 671 QSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTC-LKFLKECPWERLAELRE---LIPNIPFQMILRGNSLVG 746 (1427)
Q Consensus 671 Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~-~rfl~e~p~erl~~lr~---~~p~~~~qml~Rg~n~vg 746 (1427)
| .| .|.+.+|..+.++.+.. +|+..|-+..++ .|.- ..-++-+.-+-++.+++ .....-...-+-+ --+
T Consensus 79 ~-~l-~r~~~~di~~a~~al~~--ag~~~v~if~~~-Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~--ed~ 151 (370)
T 3rmj_A 79 C-SL-SRAIERDIRQAGEAVAP--APKKRIHTFIAT-SPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSC--EDA 151 (370)
T ss_dssp E-EE-EESSHHHHHHHHHHHTT--SSSEEEEEEEEC-SHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEE--ETG
T ss_pred E-EE-ecCCHHHHHHHHHHHhh--CCCCEEEEEecC-cHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEec--CCC
Confidence 2 22 35567777777777766 788887765433 2221 11234444444444333 2222111110100 012
Q ss_pred ccCCCcchHHHHHHHHHhcCCCEEEEeccCC--hHHHHHHHHHHHHHh
Q psy15244 747 YSNYSPAEVGAFCRLASQAGIDIFRVFDPLN--SVPNLVKGMDAVQQV 792 (1427)
Q Consensus 747 y~~~~~nvv~~~v~~a~~~Gid~~rif~~~n--d~~~~~~~i~~a~~~ 792 (1427)
+ ..+.+.+.+.++.+.+.|+++|++.|.+- ....+...++.+++.
T Consensus 152 ~-r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~ 198 (370)
T 3rmj_A 152 L-RSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAK 198 (370)
T ss_dssp G-GSCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHH
T ss_pred C-ccCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHh
Confidence 2 23445566788888899999999999876 345666667766654
No 205
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=91.08 E-value=6.1 Score=45.27 Aligned_cols=184 Identities=15% Similarity=0.120 Sum_probs=106.5
Q ss_pred EEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-cc--CcC-------CHHH---HHHHHHHHHHHcCC
Q psy15244 798 IVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKD-MA--GLL-------KPTA---AKLLIGSFREKYPN 864 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~D-t~--G~l-------~P~~---~~~lv~~lr~~~p~ 864 (1427)
.+.+-|..|.|=++ | ...+.+..++.++++.+.|||+|-|.= +. |.- ..++ +...|++|++.+ +
T Consensus 29 ~vMGIlNvTpDSFs-d-~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-~ 105 (314)
T 3tr9_A 29 AVMGIINVSPNSFY-H-PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-P 105 (314)
T ss_dssp EEEEEEECSTTCSB-C-BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-C
T ss_pred EEEEEEeCCCCchh-h-ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-C
Confidence 56677777765222 2 346899999999999999999998873 11 111 1233 445677777776 8
Q ss_pred ceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh-------CCCCCCCC--------hhh
Q psy15244 865 ILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN-------TDKRCGID--------LHD 929 (1427)
Q Consensus 865 ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~-------~g~~tgid--------l~~ 929 (1427)
+||.+-+=+ ...+.+|+++|+++|+-- +|.. .+.+-.+++.... .|...... .+.
T Consensus 106 vpISIDT~~-----~~Va~aAl~aGa~iINDV-sg~~----~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev 175 (314)
T 3tr9_A 106 QLISVDTSR-----PRVMREAVNTGADMINDQ-RALQ----LDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSV 175 (314)
T ss_dssp SEEEEECSC-----HHHHHHHHHHTCCEEEET-TTTC----STTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHH
T ss_pred CeEEEeCCC-----HHHHHHHHHcCCCEEEEC-CCCC----chHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHH
Confidence 999997655 456689999999999753 3332 3555555554431 12111111 023
Q ss_pred HHHHHHHHHHHhCCCCCCCC----cccccchhhhhHHHHHHHHHHhhhhcCCCCCCCCCcCcccEEEecC
Q psy15244 930 VCDYSSYWRKVRELYAPAHN----LLWRCGIDLHDVCDYSSYWRKVRELYAPFECTDLKAASSEAYLYEI 995 (1427)
Q Consensus 930 L~~l~~~v~~~~g~~~~~~k----pivG~~~f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~~~v~~~~~ 995 (1427)
+..+.+.++.....-+++.+ |.+|...|.... .+.-.+.+.-..+..+.+|-+.|.++.-+++++
T Consensus 176 ~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~-~~n~~lL~~l~~l~~lg~PvL~G~SRKsfig~~ 244 (314)
T 3tr9_A 176 KKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNV-SENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDV 244 (314)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCH-HHHHHHHHTTHHHHTTSSCBEECCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCH-HHHHHHHHHHHHHhcCCCCEEEEechhhhhhhh
Confidence 44455566666555555555 445544465443 333333333333444565666776655554443
No 206
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.06 E-value=0.89 Score=46.28 Aligned_cols=41 Identities=12% Similarity=0.096 Sum_probs=33.2
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCc
Q psy15244 52 PPPKTMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDK 92 (1427)
Q Consensus 52 ~~~~~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~ 92 (1427)
|.....++|+|+|.|.++..+++.+++.|+++++++.+++.
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 33445679999999999999999999999998888766554
No 207
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=90.94 E-value=0.18 Score=52.37 Aligned_cols=68 Identities=26% Similarity=0.360 Sum_probs=44.4
Q ss_pred CceecCCCeEEEEE-----------------------------------EecCCCEEecCCEEEEEEc--CC-----cee
Q psy15244 1358 GEIGAPMPGNIIEV-----------------------------------KVKVGQQVKKNDVLIVMSV--MK-----TET 1395 (1427)
Q Consensus 1358 ~~V~APm~G~v~~v-----------------------------------~V~~Gd~V~~G~~l~~iea--mK-----me~ 1395 (1427)
+.|.||..|+|..+ +|++||+|++||+|+.+.- .| +.+
T Consensus 50 ~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidTV~l~G~gF~~~V~~Gd~V~~G~~L~~~d~~~i~~~g~~~~t 129 (161)
T 1f3z_A 50 NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLT 129 (161)
T ss_dssp SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTTTEEECSCTTCEECTTCEEEEECHHHHHHHCSBCCE
T ss_pred CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccchhcCCCccEEEEeCcCEECCCCEEEEECHHHHHhcCCCCeE
Confidence 68899999999877 8999999999999998862 21 344
Q ss_pred eeecCCCeEEEEEEecCCCeeCCC-CEEEEEe
Q psy15244 1396 LIHASADGVVKEIFVEVGGQVAQN-DLVVVLD 1426 (1427)
Q Consensus 1396 ~i~Ap~~G~V~~i~v~~G~~V~~g-~~L~~i~ 1426 (1427)
.|.-.-...+..+....| .|.+| +.|+.+.
T Consensus 130 ~vvvtn~~~~~~~~~~~~-~v~~~~~~~~~~~ 160 (161)
T 1f3z_A 130 PVVISNMDEIKELIKLSG-SVTVGETPVIRIK 160 (161)
T ss_dssp EEEESCGGGCSEEEECCS-EECTTTSEEEEEE
T ss_pred EEEEECCcccceEEeccc-eEeeCCcEEEEEE
Confidence 443322222333323334 56555 4777764
No 208
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=90.92 E-value=3.9 Score=45.61 Aligned_cols=174 Identities=13% Similarity=0.100 Sum_probs=104.6
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCC--CceeeeecccccccccC--CCcc
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPN--IPFQMILRGNSLVGYSN--YSPA 753 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~--~~~qml~Rg~n~vgy~~--~~~n 753 (1427)
.+.+|+.+++....+ -|+.++-+..+. ++..++.+.+ +++.. .+||.. .+..
T Consensus 56 ~t~~~I~~lc~eA~~--~~~aaVCV~p~~----------------V~~a~~~L~gs~v~v~t------VigFP~G~~~~~ 111 (260)
T 3r12_A 56 ATPDDIKKLCLEARE--NRFHGVCVNPCY----------------VKLAREELEGTDVKVVT------VVGFPLGANETR 111 (260)
T ss_dssp CCHHHHHHHHHHHHH--TTCSEEEECGGG----------------HHHHHHHHTTSCCEEEE------EESTTTCCSCHH
T ss_pred CCHHHHHHHHHHHHh--cCCcEEEECHHH----------------HHHHHHHhcCCCCeEEE------EecCCCCCCcHH
Confidence 567888888888777 688888775321 2222333333 33333 334432 3345
Q ss_pred hHHHHHHHHHhcCCCEEEEeccCChH-----HHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHH
Q psy15244 754 EVGAFCRLASQAGIDIFRVFDPLNSV-----PNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAK 827 (1427)
Q Consensus 754 vv~~~v~~a~~~Gid~~rif~~~nd~-----~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~ 827 (1427)
+.-.-++.|++.|.|.+-+......+ +.+..-+..++++ +. ..+ -.|--++ ..+.+.....++
T Consensus 112 ~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~--~~l-KVIlEt~--------~Lt~eei~~A~~ 180 (260)
T 3r12_A 112 TKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKG--KVV-KVIIETC--------YLDTEEKIAACV 180 (260)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT--SEE-EEECCGG--------GCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCC--CcE-EEEEeCC--------CCCHHHHHHHHH
Confidence 45555888999999999988776543 4444444444444 22 133 2333332 457889999999
Q ss_pred HHHHCCCCEEEEccccC----cCCHHHHHHHHHHHHHHcCCceEEEee--cCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 828 QLVESGAQVLCLKDMAG----LLKPTAAKLLIGSFREKYPNILIHVHT--HDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 828 ~l~~~Gad~i~i~Dt~G----~l~P~~~~~lv~~lr~~~p~ipi~~H~--Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
.+.++|||.|--. .| ..+++++..+-+.+. +.++|=.=. + | ...+++-++|||+.+=+|
T Consensus 181 ia~eaGADfVKTS--TGf~~~GAT~edV~lm~~~vg---~~v~VKaAGGIr-t----~~~al~mi~aGA~RiGtS 245 (260)
T 3r12_A 181 ISKLAGAHFVKTS--TGFGTGGATAEDVHLMKWIVG---DEMGVKASGGIR-T----FEDAVKMIMYGADRIGTS 245 (260)
T ss_dssp HHHHTTCSEEECC--CSSSSCCCCHHHHHHHHHHHC---TTSEEEEESSCC-S----HHHHHHHHHTTCSEEEES
T ss_pred HHHHhCcCEEEcC--CCCCCCCCCHHHHHHHHHHhC---CCceEEEeCCCC-C----HHHHHHHHHcCCceeecc
Confidence 9999999987654 44 456666555433332 234442211 1 1 266777799999998655
No 209
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=90.78 E-value=1.1 Score=48.61 Aligned_cols=159 Identities=13% Similarity=0.138 Sum_probs=101.3
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
.+.++.+++++.|-+ .|+..||+. +-.++..+-++.+++.+|+..+.. | +.. + .+
T Consensus 22 ~~~~~a~~~a~al~~--gGi~~iEvt----------~~t~~a~~~I~~l~~~~p~~~IGA---G-TVl-------t--~~ 76 (217)
T 3lab_A 22 DDLVHAIPMAKALVA--GGVHLLEVT----------LRTEAGLAAISAIKKAVPEAIVGA---G-TVC-------T--AD 76 (217)
T ss_dssp SCGGGHHHHHHHHHH--TTCCEEEEE----------TTSTTHHHHHHHHHHHCTTSEEEE---E-CCC-------S--HH
T ss_pred CCHHHHHHHHHHHHH--cCCCEEEEe----------CCCccHHHHHHHHHHHCCCCeEee---c-ccc-------C--HH
Confidence 456889999999988 899999995 225677889999999998754322 2 111 2 23
Q ss_pred HHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q psy15244 758 FCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVL 837 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i 837 (1427)
.++.++++|.+.+-. +..+-+ .++++++.|..+ .-++ .++-| ..|++. +..+.++|+|.|
T Consensus 77 ~a~~ai~AGA~fivs--P~~~~e----vi~~~~~~~v~~-~~~~-~~~PG--------~~TptE----~~~A~~~Gad~v 136 (217)
T 3lab_A 77 DFQKAIDAGAQFIVS--PGLTPE----LIEKAKQVKLDG-QWQG-VFLPG--------VATASE----VMIAAQAGITQL 136 (217)
T ss_dssp HHHHHHHHTCSEEEE--SSCCHH----HHHHHHHHHHHC-SCCC-EEEEE--------ECSHHH----HHHHHHTTCCEE
T ss_pred HHHHHHHcCCCEEEe--CCCcHH----HHHHHHHcCCCc-cCCC-eEeCC--------CCCHHH----HHHHHHcCCCEE
Confidence 488999999998743 223333 344455544300 0000 01111 234443 334578999999
Q ss_pred EEccccCcCCHHHH---HHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCE
Q psy15244 838 CLKDMAGLLKPTAA---KLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADI 892 (1427)
Q Consensus 838 ~i~Dt~G~l~P~~~---~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~ 892 (1427)
-+ .|... ..++++++..+|++++--= -|....|+-..+++|+..
T Consensus 137 K~-------FPa~~~gG~~~lkal~~p~p~i~~~pt----GGI~~~N~~~~l~aGa~~ 183 (217)
T 3lab_A 137 KC-------FPASAIGGAKLLKAWSGPFPDIQFCPT----GGISKDNYKEYLGLPNVI 183 (217)
T ss_dssp EE-------TTTTTTTHHHHHHHHHTTCTTCEEEEB----SSCCTTTHHHHHHSTTBC
T ss_pred EE-------CccccccCHHHHHHHHhhhcCceEEEe----CCCCHHHHHHHHHCCCEE
Confidence 75 34332 4789999998988887643 344456788888999744
No 210
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=90.77 E-value=0.64 Score=51.10 Aligned_cols=139 Identities=18% Similarity=0.251 Sum_probs=87.9
Q ss_pred HHHHHHHHhC-CCCceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEE
Q psy15244 721 ERLAELRELI-PNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIV 799 (1427)
Q Consensus 721 erl~~lr~~~-p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v 799 (1427)
+-++.||+.. ++.++-..+-- +.|+ .+++.++++|+|.+.+-.-.. +.+.+.++.+++.|. .+
T Consensus 52 ~~v~~ir~~~~~~~~~dvhLmv-------~~p~----~~i~~~~~aGad~itvH~Ea~--~~~~~~i~~i~~~G~---k~ 115 (228)
T 3ovp_A 52 PVVESLRKQLGQDPFFDMHMMV-------SKPE----QWVKPMAVAGANQYTFHLEAT--ENPGALIKDIRENGM---KV 115 (228)
T ss_dssp HHHHHHHHHHCSSSCEEEEEEC-------SCGG----GGHHHHHHHTCSEEEEEGGGC--SCHHHHHHHHHHTTC---EE
T ss_pred HHHHHHHHhhCCCCcEEEEEEe-------CCHH----HHHHHHHHcCCCEEEEccCCc--hhHHHHHHHHHHcCC---CE
Confidence 4678888885 77776654421 1233 357788889999998865433 257788889999998 65
Q ss_pred EEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE----ccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCc
Q psy15244 800 EATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCL----KDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMA 875 (1427)
Q Consensus 800 ~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i----~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~ 875 (1427)
..++ +|. ++.+.+.++. + .+|.|.+ .-..|...-....+.++.+|+..++++|.+= -
T Consensus 116 gval-------~p~---t~~e~l~~~l----~-~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~Vd----G 176 (228)
T 3ovp_A 116 GLAI-------KPG---TSVEYLAPWA----N-QIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVD----G 176 (228)
T ss_dssp EEEE-------CTT---SCGGGTGGGG----G-GCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEE----S
T ss_pred EEEE-------cCC---CCHHHHHHHh----c-cCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhcCCCCEEEe----C
Confidence 4443 342 3333332222 2 2676543 2222322222345568889988877888764 4
Q ss_pred chHHHHHHHHHHhcCCEEE
Q psy15244 876 GTGVATTLACVKAGADIVD 894 (1427)
Q Consensus 876 GlA~An~laAi~AGad~VD 894 (1427)
|....|.-.+++||||++=
T Consensus 177 GI~~~t~~~~~~aGAd~~V 195 (228)
T 3ovp_A 177 GVGPDTVHKCAEAGANMIV 195 (228)
T ss_dssp SCSTTTHHHHHHHTCCEEE
T ss_pred CcCHHHHHHHHHcCCCEEE
Confidence 6666888999999999873
No 211
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=90.72 E-value=2.3 Score=46.48 Aligned_cols=173 Identities=17% Similarity=0.139 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHhhcCCccEEecc--CCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHH
Q psy15244 681 YDLKKVSPFVANRFNNLYSLEMW--GGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAF 758 (1427)
Q Consensus 681 ~d~l~ia~~l~~~~~G~~~iE~~--ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~ 758 (1427)
.+..+.++.+.+ .|++.+++. .|..+. -+... .+.++.|++.. +.++...+-- +-| ..+
T Consensus 19 ~~l~~~i~~~~~--~Gad~i~l~i~Dg~fv~----~~~~~-~~~~~~lr~~~-~~~~~v~lmv-------~d~----~~~ 79 (228)
T 1h1y_A 19 ANLAAEADRMVR--LGADWLHMDIMDGHFVP----NLTIG-APVIQSLRKHT-KAYLDCHLMV-------TNP----SDY 79 (228)
T ss_dssp GGHHHHHHHHHH--TTCSEEEEEEEBSSSSS----CBCBC-HHHHHHHHTTC-CSEEEEEEES-------SCG----GGG
T ss_pred HHHHHHHHHHHH--cCCCEEEEEEecCCcCc----chhhC-HHHHHHHHhhc-CCcEEEEEEe-------cCH----HHH
Confidence 345555666666 688887764 111100 11222 36778888766 4444432211 112 346
Q ss_pred HHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHC--CCCE
Q psy15244 759 CRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVES--GAQV 836 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~--Gad~ 836 (1427)
++.+.++|+|.+.+-.-.++ +.+...++.+++.|. .+-..+ +|. .+.+ ..+.+.+. ++|.
T Consensus 80 i~~~~~agad~v~vH~~~~~-~~~~~~~~~i~~~g~---~igv~~-------~p~---t~~e----~~~~~~~~~~~~d~ 141 (228)
T 1h1y_A 80 VEPLAKAGASGFTFHIEVSR-DNWQELIQSIKAKGM---RPGVSL-------RPG---TPVE----EVFPLVEAENPVEL 141 (228)
T ss_dssp HHHHHHHTCSEEEEEGGGCT-TTHHHHHHHHHHTTC---EEEEEE-------CTT---SCGG----GGHHHHHSSSCCSE
T ss_pred HHHHHHcCCCEEEECCCCcc-cHHHHHHHHHHHcCC---CEEEEE-------eCC---CCHH----HHHHHHhcCCCCCE
Confidence 88888899999977776554 223667778888888 554322 231 2222 23455565 8998
Q ss_pred EEEcccc-----CcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEe
Q psy15244 837 LCLKDMA-----GLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 837 i~i~Dt~-----G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~ 895 (1427)
|.+ ++. |.-.+....+.++.+|+..+++||.+ +.|....|.-.++++|||.+=+
T Consensus 142 vl~-~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v----~GGI~~~ni~~~~~aGaD~vvv 200 (228)
T 1h1y_A 142 VLV-MTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEV----DGGLGPSTIDVAASAGANCIVA 200 (228)
T ss_dssp EEE-ESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEE----ESSCSTTTHHHHHHHTCCEEEE
T ss_pred EEE-EeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEE----ECCcCHHHHHHHHHcCCCEEEE
Confidence 877 222 33334556677888888876788765 3466667888889999998744
No 212
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=90.64 E-value=11 Score=44.60 Aligned_cols=140 Identities=18% Similarity=0.193 Sum_probs=86.4
Q ss_pred HHHHHHhcCCCEEEEec--------------cCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCC-------C
Q psy15244 758 FCRLASQAGIDIFRVFD--------------PLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKK-------K 816 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~--------------~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~-------~ 816 (1427)
.++..+++|+..|||-. ..++++.+..+++.|+++|+ .+-.-+.|+..+.+|... .
T Consensus 53 ~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GL---kVlldfHysD~WadPg~Q~~P~aW~~ 129 (399)
T 1ur4_A 53 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGM---KLLADFHYSDFWADPAKQKAPKAWAN 129 (399)
T ss_dssp HHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTC---EEEEEECSSSSCCSSSCCCCCGGGTT
T ss_pred HHHHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCC---EEEEEeccCCccCCcccccCcccccc
Confidence 46677789999999731 12678899999999999999 777777776544566310 1
Q ss_pred CC--------HHHHHHHHHHHHHCCCC--EEEEcc-----ccCcCCHHHHHH----HHHHHHHHcCCceEEEeecCCcch
Q psy15244 817 YS--------LNYYEDLAKQLVESGAQ--VLCLKD-----MAGLLKPTAAKL----LIGSFREKYPNILIHVHTHDMAGT 877 (1427)
Q Consensus 817 ~~--------~~~~~~~a~~l~~~Gad--~i~i~D-----t~G~l~P~~~~~----lv~~lr~~~p~ipi~~H~Hnd~Gl 877 (1427)
.+ .+|-.++++.+.+.|+. .+.+-- +.|......... .++++|+..|+.+|-+|..+-...
T Consensus 130 ~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~~ 209 (399)
T 1ur4_A 130 LNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETS 209 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTST
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcch
Confidence 23 23556677778788865 443332 222222444333 357888888999988887654333
Q ss_pred HH----HHHHHHHHhcCCEEEeccccC
Q psy15244 878 GV----ATTLACVKAGADIVDVAADSM 900 (1427)
Q Consensus 878 A~----An~laAi~AGad~VD~av~Gm 900 (1427)
+. .+.+.+...=.|+|-++..++
T Consensus 210 ~~~~~~~d~l~~~g~d~DvIG~syYp~ 236 (399)
T 1ur4_A 210 GRYAWIAETLHRHHVDYDVFASSYYPF 236 (399)
T ss_dssp THHHHHHHHHHHTTCCCSEEEEEECTT
T ss_pred HHHHHHHHHHHHcCCCcCeEeEecCcc
Confidence 22 222222222266777777665
No 213
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=90.54 E-value=1.1 Score=48.67 Aligned_cols=172 Identities=15% Similarity=0.160 Sum_probs=100.9
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
.+.++-+++++.+. .|++.+|++..- ++... .+-++.+|+..++.++-..+. + -..| ..
T Consensus 16 ~~~~~~~~~~~~~~---~~vd~ie~g~~~-------~~~~G-~~~i~~lr~~~~~~~i~ld~~---l---~d~p----~~ 74 (218)
T 3jr2_A 16 TNLTDAVAVASNVA---SYVDVIEVGTIL-------AFAEG-MKAVSTLRHNHPNHILVCDMK---T---TDGG----AI 74 (218)
T ss_dssp SSHHHHHHHHHHHG---GGCSEEEECHHH-------HHHHT-THHHHHHHHHCTTSEEEEEEE---E---CSCH----HH
T ss_pred CCHHHHHHHHHHhc---CCceEEEeCcHH-------HHhcC-HHHHHHHHHhCCCCcEEEEEe---e---cccH----HH
Confidence 45677788888874 489999986211 11112 356788998887766443221 0 0111 23
Q ss_pred HHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q psy15244 758 FCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVL 837 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i 837 (1427)
+++.++++|+|.+-+-+... .+.++.+++.+++.|. .... |+..| .|.+. ++.+.+.|+|.+
T Consensus 75 ~~~~~~~aGad~i~vh~~~~-~~~~~~~~~~~~~~g~---~~~~------d~l~~----~T~~~----~~~~~~~g~d~v 136 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAH-IATIAACKKVADELNG---EIQI------EIYGN----WTMQD----AKAWVDLGITQA 136 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSC-HHHHHHHHHHHHHHTC---EEEE------ECCSS----CCHHH----HHHHHHTTCCEE
T ss_pred HHHHHHhcCCCEEEEecCCC-HHHHHHHHHHHHHhCC---ccce------eeeec----CCHHH----HHHHHHcCccce
Confidence 68899999999988776544 3557888888999888 3321 12233 24332 344456699976
Q ss_pred EEc-----cccCc-CCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEe
Q psy15244 838 CLK-----DMAGL-LKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 838 ~i~-----Dt~G~-l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~ 895 (1427)
.+. ...|. ..|... +.++.++. +++||.+=. |.-..|+-.++++|||.|=+
T Consensus 137 ~~~~~~~~~~~g~~~~~~~l-~~i~~~~~--~~~pi~v~G----GI~~~~~~~~~~aGAd~vvv 193 (218)
T 3jr2_A 137 IYHRSRDAELAGIGWTTDDL-DKMRQLSA--LGIELSITG----GIVPEDIYLFEGIKTKTFIA 193 (218)
T ss_dssp EEECCHHHHHHTCCSCHHHH-HHHHHHHH--TTCEEEEES----SCCGGGGGGGTTSCEEEEEE
T ss_pred eeeeccccccCCCcCCHHHH-HHHHHHhC--CCCCEEEEC----CCCHHHHHHHHHcCCCEEEE
Confidence 551 11132 233322 33444443 367776543 33345566799999988733
No 214
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=90.48 E-value=4.8 Score=46.12 Aligned_cols=190 Identities=12% Similarity=0.071 Sum_probs=111.5
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhh----hccccChHHHHH----HHHHhCCCCceeeeecccccccccC
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCL----KFLKECPWERLA----ELRELIPNIPFQMILRGNSLVGYSN 749 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~----rfl~e~p~erl~----~lr~~~p~~~~qml~Rg~n~vgy~~ 749 (1427)
.+.++.++.|..+-+ .|.+.|++||-+|-..+- .--.+..|+|+. .|++. .+++++.= .
T Consensus 46 ~~~~~al~~A~~~v~--~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~-~~vpISID----------T 112 (314)
T 3tr9_A 46 LDLNSALRTAEKMVD--EGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKR-FPQLISVD----------T 112 (314)
T ss_dssp CSHHHHHHHHHHHHH--TTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHH-CCSEEEEE----------C
T ss_pred CCHHHHHHHHHHHHH--CCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhh-CCCeEEEe----------C
Confidence 467888899998877 799999999865532211 111233455543 33333 24444431 1
Q ss_pred CCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCC---------CHH
Q psy15244 750 YSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKY---------SLN 820 (1427)
Q Consensus 750 ~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~---------~~~ 820 (1427)
+ .-+.+++|.++|.++|.=....++ ....+.+++.|. -+. ++.. -+.|..-.. -.+
T Consensus 113 ~----~~~Va~aAl~aGa~iINDVsg~~~----~~m~~v~a~~g~---~vV--lMh~--~G~P~tmq~~~~ydvv~ev~~ 177 (314)
T 3tr9_A 113 S----RPRVMREAVNTGADMINDQRALQL----DDALTTVSALKT---PVC--LMHF--PSETRKPGSTTHFYFLQSVKK 177 (314)
T ss_dssp S----CHHHHHHHHHHTCCEEEETTTTCS----TTHHHHHHHHTC---CEE--EECC--CCTTCCTTSSCHHHHHHHHHH
T ss_pred C----CHHHHHHHHHcCCCEEEECCCCCc----hHHHHHHHHhCC---eEE--EECC--CCCCcccccccccchHHHHHH
Confidence 2 233467888889998876666653 244566677776 221 2222 134422111 157
Q ss_pred HHHHHHHHHHHCCCC--EEEEccc-cC---cC-CHHHHHHHHHHHHHH-cCCceEEE-e-------------ecCCcchH
Q psy15244 821 YYEDLAKQLVESGAQ--VLCLKDM-AG---LL-KPTAAKLLIGSFREK-YPNILIHV-H-------------THDMAGTG 878 (1427)
Q Consensus 821 ~~~~~a~~l~~~Gad--~i~i~Dt-~G---~l-~P~~~~~lv~~lr~~-~p~ipi~~-H-------------~Hnd~GlA 878 (1427)
++.+.++.+.++|++ .|.| |- .| .. ++.+-.++++.++.- ..+.|+-+ . ..+-.+..
T Consensus 178 ~l~~~i~~a~~~GI~~~~Iil-DPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~PvL~G~SRKsfig~~~~~~~~~R~~~t 256 (314)
T 3tr9_A 178 ELQESIQRCKKAGISEDRIII-DPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDVLNQPPENRLFGS 256 (314)
T ss_dssp HHHHHHHHHHHTTCCGGGEEE-ECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSCBEECCTTCHHHHHHHTCCGGGCHHHH
T ss_pred HHHHHHHHHHHcCCCHhHEEE-eCCCCchhhcCCHHHHHHHHHHHHHHhcCCCCEEEEechhhhhhhhcCCChHHhHHHH
Confidence 788888999999996 4444 54 34 22 356677777776542 13677544 1 22344555
Q ss_pred HHHHHHHHHhcCCEEEec
Q psy15244 879 VATTLACVKAGADIVDVA 896 (1427)
Q Consensus 879 ~An~laAi~AGad~VD~a 896 (1427)
+|.+..|++.||++|-+-
T Consensus 257 ~a~~~~a~~~Ga~IvRvH 274 (314)
T 3tr9_A 257 IAADVLAVYHGASIIRTH 274 (314)
T ss_dssp HHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCcEEEeC
Confidence 566778889999998654
No 215
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=90.44 E-value=0.33 Score=51.09 Aligned_cols=20 Identities=30% Similarity=0.398 Sum_probs=17.6
Q ss_pred EEEecCCCeeCCCCEEEEEe
Q psy15244 1407 EIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1407 ~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
+.+|++||.|++||+|++++
T Consensus 119 ~~~V~~Gd~Vk~Gd~L~~fD 138 (183)
T 3our_B 119 TRIAEEGQTVKAGDTVIEFD 138 (183)
T ss_dssp EECSCTTCEECTTCEEEEEC
T ss_pred eEEEeCcCEEcCCCEEEEEC
Confidence 46789999999999999875
No 216
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=90.20 E-value=4 Score=46.91 Aligned_cols=204 Identities=13% Similarity=0.092 Sum_probs=104.8
Q ss_pred eEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHH----HHHHHhCCCCc
Q psy15244 659 ILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERL----AELRELIPNIP 734 (1427)
Q Consensus 659 v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl----~~lr~~~p~~~ 734 (1427)
+.+|--+|=||.+. ++.+..++.|..+-+ .|.+.|++||-+|--. -..-.+..++|+ +.+++..|+++
T Consensus 48 lNvTPDSFsdgg~~-----~~~~~a~~~A~~~v~--~GAdIIDIGgeSTrPG-~~v~~~eEl~Rv~pvI~~l~~~~~~vp 119 (318)
T 2vp8_A 48 VNRTPDSFYDKGAT-----FSDAAARDAVHRAVA--DGADVIDVGGVKAGPG-ERVDVDTEITRLVPFIEWLRGAYPDQL 119 (318)
T ss_dssp EC-------------------CHHHHHHHHHHHH--TTCSEEEEC-----------CHHHHHHHHHHHHHHHHHHSTTCE
T ss_pred EeCCCCcccCCCcc-----CCHHHHHHHHHHHHH--CCCCEEEECCCcCCCC-CCCCHHHHHHHHHHHHHHHHhhCCCCe
Confidence 34455557888763 456888888888877 7999999998554211 111123456664 56666666777
Q ss_pred eeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCC-CC
Q psy15244 735 FQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTN-PN 813 (1427)
Q Consensus 735 ~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~-p~ 813 (1427)
++.=. | .-+.+++|.++|.++|.=....++ ...++.+++.|. -+. .+.+. +. |.
T Consensus 120 ISIDT----------~----~~~VaeaAl~aGa~iINDVsg~~d----~~m~~vaa~~g~---~vV-lmh~~---G~~p~ 174 (318)
T 2vp8_A 120 ISVDT----------W----RAQVAKAACAAGADLINDTWGGVD----PAMPEVAAEFGA---GLV-CAHTG---GALPR 174 (318)
T ss_dssp EEEEC----------S----CHHHHHHHHHHTCCEEEETTSSSS----TTHHHHHHHHTC---EEE-EECC---------
T ss_pred EEEeC----------C----CHHHHHHHHHhCCCEEEECCCCCc----hHHHHHHHHhCC---CEE-EECCC---CCCcc
Confidence 65422 2 233467888889998876655542 344566777777 221 11221 12 32
Q ss_pred C----CCCC----------HHHHHHHHHHHHHCCCC--EEEEccc-cCcC-CHHHHHHHHHHHHHHc-CCceEEEe----
Q psy15244 814 K----KKYS----------LNYYEDLAKQLVESGAQ--VLCLKDM-AGLL-KPTAAKLLIGSFREKY-PNILIHVH---- 870 (1427)
Q Consensus 814 ~----~~~~----------~~~~~~~a~~l~~~Gad--~i~i~Dt-~G~l-~P~~~~~lv~~lr~~~-p~ipi~~H---- 870 (1427)
. ..|. .+++.+.++.+.++|+. .|.| |. .|.. +.++-.++++.+++-- .+.|+-+=
T Consensus 175 tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~Iil-DPG~GF~Kt~~~nl~ll~~l~~l~~lg~PvL~G~SrK 253 (318)
T 2vp8_A 175 TRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLI-DPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNK 253 (318)
T ss_dssp -------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ETTTTCCTTSHHHHHHHHTHHHHHTTSSCBEECCC--
T ss_pred ccccccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEE-cCCCCcccCHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Confidence 1 1121 27778888999999986 4443 43 2332 3355666666666421 14554321
Q ss_pred ----------ecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 871 ----------THDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 871 ----------~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
..+-..-.+|.+..|+..||++|.+-
T Consensus 254 sfig~~~g~~~~~r~~~t~a~~~~a~~~Ga~IvRvH 289 (318)
T 2vp8_A 254 DVVGETLGVDLTERLEGTLAATALAAAAGARMFRVH 289 (318)
T ss_dssp -------------CHHHHHHHHHHHHHTTCCEEEES
T ss_pred hhhhhhcCCChHHhHHHHHHHHHHHHHCCCeEEEcC
Confidence 12223344556678888999998765
No 217
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=90.16 E-value=1.6 Score=49.29 Aligned_cols=179 Identities=18% Similarity=0.089 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHhhcCCccEEeccCCCc--------hh-hhhhccc-----cChHHHHHHHHHhCCCCceeeeecccccc
Q psy15244 680 TYDLKKVSPFVANRFNNLYSLEMWGGAV--------SH-TCLKFLK-----ECPWERLAELRELIPNIPFQMILRGNSLV 745 (1427)
Q Consensus 680 t~d~l~ia~~l~~~~~G~~~iE~~ggat--------fd-~~~rfl~-----e~p~erl~~lr~~~p~~~~qml~Rg~n~v 745 (1427)
.+.-+++++.|.+ . ++.||++.+.. .. .+.|-+. ++-++-++.+|+. +++++-.+
T Consensus 29 ~~~~~~~~~~l~~--~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~-~~~Pii~m------- 97 (271)
T 1ujp_A 29 REGFLQAVEEVLP--Y-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRAL-TEKPLFLM------- 97 (271)
T ss_dssp HHHHHHHHHHHGG--G-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CCSCEEEE-------
T ss_pred hHHHHHHHHHHHh--c-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEE-------
Confidence 3567778889988 5 99999986642 00 0111111 1124667888888 67775554
Q ss_pred cccCC-CcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHH
Q psy15244 746 GYSNY-SPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYED 824 (1427)
Q Consensus 746 gy~~~-~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~ 824 (1427)
+|.+- -..-...|++.+.++|+|.+-+.|... +.....++.+++.|. .. +... .| ..+.+-+..
T Consensus 98 ~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~--ee~~~~~~~~~~~gl---~~---i~li----ap---~s~~eri~~ 162 (271)
T 1ujp_A 98 TYLNPVLAWGPERFFGLFKQAGATGVILPDLPP--DEDPGLVRLAQEIGL---ET---VFLL----AP---TSTDARIAT 162 (271)
T ss_dssp CCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCG--GGCHHHHHHHHHHTC---EE---ECEE----CT---TCCHHHHHH
T ss_pred ecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCH--HHHHHHHHHHHHcCC---ce---EEEe----CC---CCCHHHHHH
Confidence 33330 001247899999999999888877664 667778888999987 32 1222 34 234443333
Q ss_pred HHHHHHHCCCCEEEEcc---ccCcCC--HHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEE
Q psy15244 825 LAKQLVESGAQVLCLKD---MAGLLK--PTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVD 894 (1427)
Q Consensus 825 ~a~~l~~~Gad~i~i~D---t~G~l~--P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD 894 (1427)
+.+.+...+++.= ++|.-+ +....++++.+|+.. ++||-+=+ |.......+.+ +|||.|=
T Consensus 163 ----ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGf----GI~t~e~a~~~-~~ADgVI 227 (271)
T 1ujp_A 163 ----VVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART-ALPVAVGF----GVSGKATAAQA-AVADGVV 227 (271)
T ss_dssp ----HHTTCCSCEEEECC------------CCHHHHHHHHTTC-CSCEEEES----CCCSHHHHHHH-TTSSEEE
T ss_pred ----HHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc-CCCEEEEc----CCCCHHHHHHh-cCCCEEE
Confidence 3333433343321 334332 233467899999876 78875432 22223333335 8998763
No 218
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=90.08 E-value=4 Score=44.55 Aligned_cols=210 Identities=16% Similarity=0.036 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHhhcCCccEEeccCC-CchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHH
Q psy15244 681 YDLKKVSPFVANRFNNLYSLEMWGG-AVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFC 759 (1427)
Q Consensus 681 ~d~l~ia~~l~~~~~G~~~iE~~gg-atfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v 759 (1427)
++..++++.+.+ .|++.|++... +.+ .-....++.++.+++.. ++++..- | +-..+ ..+
T Consensus 33 ~~~~~~a~~~~~--~G~d~i~v~~~~~~~-----~~~~~~~~~i~~i~~~~-~ipvi~~--g-----~i~~~-----~~~ 92 (253)
T 1h5y_A 33 GDPVEMAVRYEE--EGADEIAILDITAAP-----EGRATFIDSVKRVAEAV-SIPVLVG--G-----GVRSL-----EDA 92 (253)
T ss_dssp ECHHHHHHHHHH--TTCSCEEEEECCCCT-----TTHHHHHHHHHHHHHHC-SSCEEEE--S-----SCCSH-----HHH
T ss_pred ccHHHHHHHHHH--cCCCEEEEEeCCccc-----cCCcccHHHHHHHHHhc-CCCEEEE--C-----CCCCH-----HHH
Confidence 467889999988 79988876421 111 00112366778888775 4554431 1 11112 236
Q ss_pred HHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEee---ccC-CCCCCCC-CCHHHHHHHHHHHHHCCC
Q psy15244 760 RLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYA---GDL-TNPNKKK-YSLNYYEDLAKQLVESGA 834 (1427)
Q Consensus 760 ~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t---~d~-~~p~~~~-~~~~~~~~~a~~l~~~Ga 834 (1427)
+.+.++|+|.+.+-..+ +.+.....+.++..|.. .+...+... +++ ....... .+.....+.++.+.++|+
T Consensus 93 ~~~~~~Gad~V~i~~~~--~~~~~~~~~~~~~~g~~--~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~ 168 (253)
T 1h5y_A 93 TTLFRAGADKVSVNTAA--VRNPQLVALLAREFGSQ--STVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGA 168 (253)
T ss_dssp HHHHHHTCSEEEESHHH--HHCTHHHHHHHHHHCGG--GEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEChHH--hhCcHHHHHHHHHcCCC--cEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCC
Confidence 78888999999887643 22222233344444530 111111110 000 0000000 001123466788888999
Q ss_pred CEEEE--ccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchH-HHHHHHHHHhcCCEEEeccccCCCCCCCCcHHH
Q psy15244 835 QVLCL--KDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTG-VATTLACVKAGADIVDVAADSMSGICSQPAMGT 911 (1427)
Q Consensus 835 d~i~i--~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA-~An~laAi~AGad~VD~av~GmG~~tgn~~lE~ 911 (1427)
+.|.+ .+..|..... -.++++.+++.. ++||-.= .|.. ..++..++++||+.|=+.-.=+. +.-++++
T Consensus 169 d~i~~~~~~~~g~~~~~-~~~~i~~l~~~~-~~pvia~----GGi~~~~~~~~~~~~Ga~~v~vgsal~~---~~~~~~~ 239 (253)
T 1h5y_A 169 GEILLTSIDRDGTGLGY-DVELIRRVADSV-RIPVIAS----GGAGRVEHFYEAAAAGADAVLAASLFHF---RVLSIAQ 239 (253)
T ss_dssp SEEEEEETTTTTTCSCC-CHHHHHHHHHHC-SSCEEEE----SCCCSHHHHHHHHHTTCSEEEESHHHHT---TSSCHHH
T ss_pred CEEEEecccCCCCcCcC-CHHHHHHHHHhc-CCCEEEe----CCCCCHHHHHHHHHcCCcHHHHHHHHHc---CCCCHHH
Confidence 99888 3433332221 245667777776 7887654 3444 36778888899998755432222 1235788
Q ss_pred HHHHHHhCCCCC
Q psy15244 912 IVSCLENTDKRC 923 (1427)
Q Consensus 912 vv~~L~~~g~~t 923 (1427)
+...|+..|++.
T Consensus 240 ~~~~l~~~g~~~ 251 (253)
T 1h5y_A 240 VKRYLKERGVEV 251 (253)
T ss_dssp HHHHHHHTTCBC
T ss_pred HHHHHHHcCCCC
Confidence 888888877653
No 219
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=90.02 E-value=5.2 Score=45.80 Aligned_cols=130 Identities=11% Similarity=-0.001 Sum_probs=87.2
Q ss_pred HHHHHHHhcCCCEEEEeccCC-h------HHHHHHHHHHHHHhcCCCcEEEEEEEeec--cCCCCCCCCCCH-HHHHHHH
Q psy15244 757 AFCRLASQAGIDIFRVFDPLN-S------VPNLVKGMDAVQQVTGGSTIVEATICYAG--DLTNPNKKKYSL-NYYEDLA 826 (1427)
Q Consensus 757 ~~v~~a~~~Gid~~rif~~~n-d------~~~~~~~i~~a~~~G~~~~~v~~~i~~t~--d~~~p~~~~~~~-~~~~~~a 826 (1427)
..++.|.+.|.|.+.+..... + ++.+.++++.+++.|. .+..- +|.. ++.+ ..++ +.+.+.+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~---p~lv~-~~~~g~~v~~----~~~~~~~v~~aa 183 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGL---LSIIE-PVVRPPRCGD----KFDREQAIIDAA 183 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTC---EEEEE-EEECCCSSCS----CCCHHHHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCC---cEEEE-EECCCCcccc----CCChhHHHHHHH
Confidence 458899999999988544322 2 3567778888888888 43332 3331 2222 2456 8888889
Q ss_pred HHHHHCCCCEEEEccc-cCcCCHHHHHHHHHHHHHHcCCce-EEEeecCCcchHHHHHHHHHHhcCCEEEe
Q psy15244 827 KQLVESGAQVLCLKDM-AGLLKPTAAKLLIGSFREKYPNIL-IHVHTHDMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 827 ~~l~~~Gad~i~i~Dt-~G~l~P~~~~~lv~~lr~~~p~ip-i~~H~Hnd~GlA~An~laAi~AGad~VD~ 895 (1427)
+.+.++|||.+.+.=+ .|...++...++++...... .+| |-+=.=.+.-.-+.+.-.|+++|++.|-+
T Consensus 184 ~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~-~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 184 KELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHI-NMPWVILSSGVDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp HHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTC-CSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccC-CCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999887653 22237788888888766545 567 53322224445567788889999988754
No 220
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=89.86 E-value=7.4 Score=44.37 Aligned_cols=130 Identities=13% Similarity=0.080 Sum_probs=85.9
Q ss_pred HHHHHHHHHhcCCC-EEEEeccC----------ChHHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHH
Q psy15244 755 VGAFCRLASQAGID-IFRVFDPL----------NSVPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYY 822 (1427)
Q Consensus 755 v~~~v~~a~~~Gid-~~rif~~~----------nd~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~ 822 (1427)
..+.++++.+.|+| .+-|-.+. .+.+++.+.++.+++. +. -+.+ -. .|+ .+.+.+
T Consensus 108 ~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~---Pv~v--Ki-----~~~---~~~~~~ 174 (311)
T 1jub_A 108 NIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTK---PLGV--KL-----PPY---FDLVHF 174 (311)
T ss_dssp HHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCS---CEEE--EE-----CCC---CSHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCC---CEEE--EE-----CCC---CCHHHH
Confidence 34456667788999 88775431 1667788888888876 33 1211 11 232 467788
Q ss_pred HHHHHHHHHCCCCEEEEccccC----------------------cCC---HHHHHHHHHHHHHHcC-CceEEEeecCCcc
Q psy15244 823 EDLAKQLVESGAQVLCLKDMAG----------------------LLK---PTAAKLLIGSFREKYP-NILIHVHTHDMAG 876 (1427)
Q Consensus 823 ~~~a~~l~~~Gad~i~i~Dt~G----------------------~l~---P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~G 876 (1427)
.++++.+.++|+|.|.+.++.+ +.- .....++++.+++.++ ++||-.=.--..+
T Consensus 175 ~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~ 254 (311)
T 1jub_A 175 DIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETG 254 (311)
T ss_dssp HHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSH
T ss_pred HHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCH
Confidence 8999999999999998887641 111 1134578899998875 7998765544333
Q ss_pred hHHHHHHHHHHhcCCEEEeccccC
Q psy15244 877 TGVATTLACVKAGADIVDVAADSM 900 (1427)
Q Consensus 877 lA~An~laAi~AGad~VD~av~Gm 900 (1427)
..+.+++.+|||.|-..-.=+
T Consensus 255 ---~da~~~l~~GAd~V~vg~~~l 275 (311)
T 1jub_A 255 ---QDAFEHLLCGATMLQIGTALH 275 (311)
T ss_dssp ---HHHHHHHHHTCSEEEECHHHH
T ss_pred ---HHHHHHHHcCCCEEEEchHHH
Confidence 345666678999997665444
No 221
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=89.83 E-value=1 Score=51.29 Aligned_cols=93 Identities=13% Similarity=0.141 Sum_probs=60.2
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCcc-ccc-c-c-eEEEcCCCCCcccCCCCHHHHHHHHHhc
Q psy15244 55 KTMEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAH-RTK-V-D-QAFLVGKGMPPVAAYLNIPEIICIAKNN 129 (1427)
Q Consensus 55 ~~~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~-~~~-a-D-e~~~i~~~~~~~~~yldi~~Ii~ia~~~ 129 (1427)
.|+++|||.| .|.++..+++++.+.|++++++..+....... ..+ . . +.+. .++.|.+.+.++.+
T Consensus 9 ~m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~--------~Dl~d~~~l~~a~~-- 78 (318)
T 2r6j_A 9 GMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVK--------GELDEHEKLVELMK-- 78 (318)
T ss_dssp CCCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEE--------CCTTCHHHHHHHHT--
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEE--------ecCCCHHHHHHHHc--
Confidence 4567999999 59999999999999999988887654311100 000 0 1 1222 23567778877775
Q ss_pred CCCEEEeCCCccc--ccHHHHHHHHHCC-Cc
Q psy15244 130 NVDAIHPGYGFLS--EREDFAKAVIGAG-LE 157 (1427)
Q Consensus 130 ~vDaI~pg~gfls--E~~~~a~~~e~~G-i~ 157 (1427)
++|+|+-..+... ....+.+++.+.| +.
T Consensus 79 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 109 (318)
T 2r6j_A 79 KVDVVISALAFPQILDQFKILEAIKVAGNIK 109 (318)
T ss_dssp TCSEEEECCCGGGSTTHHHHHHHHHHHCCCC
T ss_pred CCCEEEECCchhhhHHHHHHHHHHHhcCCCC
Confidence 5999987665321 1235677777777 54
No 222
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=89.79 E-value=1.3 Score=43.70 Aligned_cols=101 Identities=17% Similarity=0.116 Sum_probs=67.8
Q ss_pred CCEEEEEcCC----HHHHHHHHHHHHcCCEEEEEecCCCccCc---cccc-----cceEEEcCCCCCcccCCCCHHHHHH
Q psy15244 57 MEKILIANRS----EVAIRVARACNEMGIKSVGIYSEQDKFSA---HRTK-----VDQAFLVGKGMPPVAAYLNIPEIIC 124 (1427)
Q Consensus 57 ~kkVLIagrG----eia~riiraa~elGi~~vav~s~~d~~s~---~~~~-----aDe~~~i~~~~~~~~~yldi~~Ii~ 124 (1427)
.++|.|+|.+ -.+.++++.+.+.|++++.|....+...- +..+ .|-+...- + + .....+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~-p--~----~~v~~~v~ 76 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYI-N--P----QNQLSEYN 76 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECS-C--H----HHHGGGHH
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEe-C--H----HHHHHHHH
Confidence 5789999954 46889999999999998888665442111 1111 23332211 0 0 11345666
Q ss_pred HHHhcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHH
Q psy15244 125 IAKNNNVDAIHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVL 166 (1427)
Q Consensus 125 ia~~~~vDaI~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai 166 (1427)
-|.+.++.+|+-..||. +.++.+.+++.|+.++|++.-.+
T Consensus 77 e~~~~g~k~v~~~~G~~--~~e~~~~a~~~Girvv~nC~gv~ 116 (122)
T 3ff4_A 77 YILSLKPKRVIFNPGTE--NEELEEILSENGIEPVIGCTLVM 116 (122)
T ss_dssp HHHHHCCSEEEECTTCC--CHHHHHHHHHTTCEEEESCHHHH
T ss_pred HHHhcCCCEEEECCCCC--hHHHHHHHHHcCCeEECCcCeEE
Confidence 67778899999888884 56889999999999998655443
No 223
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=89.73 E-value=3.2 Score=46.72 Aligned_cols=185 Identities=16% Similarity=0.148 Sum_probs=109.9
Q ss_pred HHHHHHHHHHhhcCCccEEeccC-CCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHH-H
Q psy15244 682 DLKKVSPFVANRFNNLYSLEMWG-GAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAF-C 759 (1427)
Q Consensus 682 d~l~ia~~l~~~~~G~~~iE~~g-gatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~-v 759 (1427)
+...+|+.+.+ .|...|.+-- .--|.. ..+.|+.+|+.+ +.++. ... -++..+ +
T Consensus 73 ~p~~~A~~y~~--~GA~~isvltd~~~f~G--------s~~~l~~ir~~v-~lPvl--~kd-----------fiid~~qv 128 (272)
T 3qja_A 73 DPAKLAQAYQD--GGARIVSVVTEQRRFQG--------SLDDLDAVRASV-SIPVL--RKD-----------FVVQPYQI 128 (272)
T ss_dssp CHHHHHHHHHH--TTCSEEEEECCGGGHHH--------HHHHHHHHHHHC-SSCEE--EES-----------CCCSHHHH
T ss_pred CHHHHHHHHHH--cCCCEEEEecChhhcCC--------CHHHHHHHHHhC-CCCEE--ECc-----------cccCHHHH
Confidence 56788888888 7988888731 111221 235677788764 44432 221 123333 8
Q ss_pred HHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q psy15244 760 RLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCL 839 (1427)
Q Consensus 760 ~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i 839 (1427)
+.|.+.|.|.+.+-++.-+.+.++..++.+++.|+ .+-+. .++.+.+. .+.++|+|.|.+
T Consensus 129 ~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl---~~lve-------------v~t~ee~~----~A~~~Gad~IGv 188 (272)
T 3qja_A 129 HEARAHGADMLLLIVAALEQSVLVSMLDRTESLGM---TALVE-------------VHTEQEAD----RALKAGAKVIGV 188 (272)
T ss_dssp HHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTC---EEEEE-------------ESSHHHHH----HHHHHTCSEEEE
T ss_pred HHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCC---cEEEE-------------cCCHHHHH----HHHHCCCCEEEE
Confidence 89999999999997766566778888999999998 43221 25555543 344679999998
Q ss_pred ccccCcCCHHHHHHHHHHHHHHcC-CceEEEeecCCcchH-HHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 840 KDMAGLLKPTAAKLLIGSFREKYP-NILIHVHTHDMAGTG-VATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 840 ~Dt~G~l~P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~GlA-~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
--...-..+.. .+.+..|++.+| ++|+-.= .|.. ..+.....++||+.|=+.-.=| ..++.+..+..|.
T Consensus 189 ~~r~l~~~~~d-l~~~~~l~~~v~~~~pvVae----gGI~t~edv~~l~~~GadgvlVGsal~----~a~dp~~~~~~l~ 259 (272)
T 3qja_A 189 NARDLMTLDVD-RDCFARIAPGLPSSVIRIAE----SGVRGTADLLAYAGAGADAVLVGEGLV----TSGDPRAAVADLV 259 (272)
T ss_dssp ESBCTTTCCBC-TTHHHHHGGGSCTTSEEEEE----SCCCSHHHHHHHHHTTCSEEEECHHHH----TCSCHHHHHHHHH
T ss_pred CCCcccccccC-HHHHHHHHHhCcccCEEEEE----CCCCCHHHHHHHHHcCCCEEEEcHHHh----CCCCHHHHHHHHH
Confidence 63221111111 123445566666 6776442 2443 5677788899999874321111 2234455555555
Q ss_pred hC
Q psy15244 918 NT 919 (1427)
Q Consensus 918 ~~ 919 (1427)
..
T Consensus 260 ~~ 261 (272)
T 3qja_A 260 TA 261 (272)
T ss_dssp TT
T ss_pred hh
Confidence 43
No 224
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=89.63 E-value=3.6 Score=47.17 Aligned_cols=201 Identities=12% Similarity=0.037 Sum_probs=114.0
Q ss_pred eEEeecCcc---cCCCCCCCcccCH-HHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCc
Q psy15244 659 ILLTDTTFR---DAHQSLLATRVRT-YDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIP 734 (1427)
Q Consensus 659 v~i~DtTlR---DG~Qsl~a~r~~t-~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~ 734 (1427)
.-|+|+|.= ||-+..+ .+. ++.++.|..+-+ .|.+.|.+++.+|--.+..---+..++.++.+++.. +++
T Consensus 51 m~I~n~tpdsf~d~i~~~~---~~~~~~~~~~A~~~v~--~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~-~vp 124 (310)
T 2h9a_B 51 LEVFDTPPTDWPDILVEPF---KDVINDPVAWAKKCVE--YGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI-DVP 124 (310)
T ss_dssp EEEESSCCSSCCHHHHGGG---TTTTTCHHHHHHHHHH--TTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-SSC
T ss_pred EEEeeCCCcccchhhhhhh---ccHHHHHHHHHHHHHH--cCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC-Cce
Confidence 468887653 6622111 111 567888887776 799999998855421111111122245667777654 667
Q ss_pred eeeeecccccccccCCCcchHHHHHHHHHhcCCC---EEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCC
Q psy15244 735 FQMILRGNSLVGYSNYSPAEVGAFCRLASQAGID---IFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTN 811 (1427)
Q Consensus 735 ~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid---~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~ 811 (1427)
++.+-.|. .+..-+.+++|+++|.+ ++.=.... +.....+.+++.|. -+ +.+.
T Consensus 125 lsI~DT~~---------~~~~~~V~eaal~aga~~k~iINdvs~~----~~~~~~~~aa~~g~---~v---v~m~----- 180 (310)
T 2h9a_B 125 LMIIGCGV---------EEKDAEIFPVIGEALSGRNCLLSSATKD----NYKPIVATCMVHGH---SV---VASA----- 180 (310)
T ss_dssp EEEECCSC---------HHHHHHHHHHHHHHTTTSCCEEEEECTT----THHHHHHHHHHHTC---EE---EEEC-----
T ss_pred EEEECCCC---------CCCCHHHHHHHHHhCCCCCCEEEECCCC----ccHHHHHHHHHhCC---CE---EEEC-----
Confidence 66533221 11234557888899987 66544443 35566677788887 22 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCC--CEEEEccccC-cC----CHHHHHHHHHH--HH--HHcCCceEEE-eecC------
Q psy15244 812 PNKKKYSLNYYEDLAKQLVESGA--QVLCLKDMAG-LL----KPTAAKLLIGS--FR--EKYPNILIHV-HTHD------ 873 (1427)
Q Consensus 812 p~~~~~~~~~~~~~a~~l~~~Ga--d~i~i~Dt~G-~l----~P~~~~~lv~~--lr--~~~p~ipi~~-H~Hn------ 873 (1427)
+ -+.+++.++++.+.++|+ +.|.|==..| .. .-....++++. |. +.+ +.|+-+ ++..
T Consensus 181 ~----~dv~~l~~~~~~a~~~Gi~~e~IilDPg~g~~g~~~e~~~~~l~~ir~~al~~~~~l-g~P~l~g~SrK~~~~~e 255 (310)
T 2h9a_B 181 P----LDINLSKQLNIMIMEMNLAPNRIIMDPLIGALGYGIEYSYSIIERMRLGALTGDKIL-AMPVVCFIGQEAWKAKE 255 (310)
T ss_dssp S----SCHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHHHHHTTCGGG-CSCBEECHHHHHTTSHH
T ss_pred h----hHHHHHHHHHHHHHHCCCChhhEEEeCCCccccCchHhHHHHHHHHHHhhhhhhhcC-CCCEEEEccCccccccc
Confidence 1 157999999999999998 4555533334 22 22233555555 22 123 556433 2211
Q ss_pred ---------------CcchHHHHHHHHHHhcCCEEE
Q psy15244 874 ---------------MAGTGVATTLACVKAGADIVD 894 (1427)
Q Consensus 874 ---------------d~GlA~An~laAi~AGad~VD 894 (1427)
..|+.++.+..|+.+||++|=
T Consensus 256 s~i~~~~~~g~~~~R~~~~~~a~a~~~~~~Ga~ivr 291 (310)
T 2h9a_B 256 AKDPEVAEWGDYALRAIHWETVTTVALIQAGGHLFV 291 (310)
T ss_dssp HHCSCCGGGCCHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred chhhhcccCCChHHcchhHHHHHHHHHHHcCCCEEE
Confidence 223356667778889999873
No 225
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=89.63 E-value=2.2 Score=47.64 Aligned_cols=94 Identities=15% Similarity=0.015 Sum_probs=64.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccc-------------------cCcCCHHHHHHHHHHHHHHcCCceEEEeecCC---
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKDM-------------------AGLLKPTAAKLLIGSFREKYPNILIHVHTHDM--- 874 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~Dt-------------------~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd--- 874 (1427)
.+.+.+.+.++.+.+.|+|.|-|... .+-+++....++++++|+.. ++|+++=...+
T Consensus 29 ~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~-~~Pv~~m~~~~~~~ 107 (262)
T 1rd5_A 29 PDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL-SCPVVLLSYYKPIM 107 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC-SSCEEEECCSHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-CCCEEEEecCcHHH
Confidence 34588899999999999998888532 23367888999999999885 89976522111
Q ss_pred -cchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCC
Q psy15244 875 -AGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKR 922 (1427)
Q Consensus 875 -~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~ 922 (1427)
.++ -.|.++|||.|...-.++ ..++.++..++..|.+
T Consensus 108 ~~~~-----~~a~~aGadgv~v~d~~~------~~~~~~~~~~~~~g~~ 145 (262)
T 1rd5_A 108 FRSL-----AKMKEAGVHGLIVPDLPY------VAAHSLWSEAKNNNLE 145 (262)
T ss_dssp SCCT-----HHHHHTTCCEEECTTCBT------TTHHHHHHHHHHTTCE
T ss_pred HHHH-----HHHHHcCCCEEEEcCCCh------hhHHHHHHHHHHcCCc
Confidence 122 138999999887642222 2466777777766644
No 226
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=89.62 E-value=1.4 Score=43.76 Aligned_cols=95 Identities=12% Similarity=0.153 Sum_probs=63.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHc-CCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 57 MEKILIANRSEVAIRVARACNEM-GIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~el-Gi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
.++++|+|.|..|..+++.+++. |++++++..+... ......... ++ +. .+.+.++++++++|.|+
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~-~~g~~i~g~---------pV--~g-~~~l~~~~~~~~id~vi 70 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRK-KHKTTMQGI---------TI--YR-PKYLERLIKKHCISTVL 70 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGG-GTTCEETTE---------EE--EC-GGGHHHHHHHHTCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcc-cCCCEecCe---------EE--EC-HHHHHHHHHHCCCCEEE
Confidence 56999999999999999999875 8998887654321 111111111 11 12 45788888999999888
Q ss_pred eCCCcccc--cHHHHHHHHHCCCce-eCCCHH
Q psy15244 136 PGYGFLSE--REDFAKAVIGAGLEF-IGPAPN 164 (1427)
Q Consensus 136 pg~gflsE--~~~~a~~~e~~Gi~f-iGps~e 164 (1427)
-..+..+. ...+.+.|.+.|+.+ +-|+..
T Consensus 71 ia~~~~~~~~~~~i~~~l~~~gv~v~~vP~~~ 102 (141)
T 3nkl_A 71 LAVPSASQVQKKVIIESLAKLHVEVLTIPNLD 102 (141)
T ss_dssp ECCTTSCHHHHHHHHHHHHTTTCEEEECCCHH
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCeEEECCCHH
Confidence 77654322 136778888999885 346544
No 227
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.51 E-value=3 Score=43.55 Aligned_cols=89 Identities=12% Similarity=0.171 Sum_probs=55.3
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEe
Q psy15244 58 EKILIANR-SEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHP 136 (1427)
Q Consensus 58 kkVLIagr-Geia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~p 136 (1427)
++|||.|. |.++..+++.+.+.|++++++..+++..... ....-.+.. .+..+.+.+.++.+ ++|.|+-
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~-------~D~~~~~~~~~~~~--~~d~vi~ 73 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-GPRPAHVVV-------GDVLQAADVDKTVA--GQDAVIV 73 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-SCCCSEEEE-------SCTTSHHHHHHHHT--TCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-cCCceEEEE-------ecCCCHHHHHHHHc--CCCEEEE
Confidence 58999995 9999999999999999998887654432110 001111111 23456677777665 4898887
Q ss_pred CCCcccc------c----HHHHHHHHHCCC
Q psy15244 137 GYGFLSE------R----EDFAKAVIGAGL 156 (1427)
Q Consensus 137 g~gflsE------~----~~~a~~~e~~Gi 156 (1427)
..+.... | ..+.+++.+.++
T Consensus 74 ~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 103 (206)
T 1hdo_A 74 LLGTRNDLSPTTVMSEGARNIVAAMKAHGV 103 (206)
T ss_dssp CCCCTTCCSCCCHHHHHHHHHHHHHHHHTC
T ss_pred CccCCCCCCccchHHHHHHHHHHHHHHhCC
Confidence 6553321 1 244556666565
No 228
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.49 E-value=0.71 Score=45.58 Aligned_cols=90 Identities=9% Similarity=0.092 Sum_probs=52.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEe
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHP 136 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~p 136 (1427)
+++|+|+|.|.++..+++.+.+.|+++++++.+++............+. + ++.+.+.+.++ .-.++|.|+-
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~-~-------d~~~~~~l~~~-~~~~~d~vi~ 76 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVI-A-------NATEENELLSL-GIRNFEYVIV 76 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEE-C-------CTTCHHHHHTT-TGGGCSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEE-e-------CCCCHHHHHhc-CCCCCCEEEE
Confidence 5689999999999999999999999988886554321111111112222 1 12344443322 2246899987
Q ss_pred CCCcc-cccHHHHHHHHHCC
Q psy15244 137 GYGFL-SEREDFAKAVIGAG 155 (1427)
Q Consensus 137 g~gfl-sE~~~~a~~~e~~G 155 (1427)
..+.. ..+...+..+.+.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~ 96 (144)
T 2hmt_A 77 AIGANIQASTLTTLLLKELD 96 (144)
T ss_dssp CCCSCHHHHHHHHHHHHHTT
T ss_pred CCCCchHHHHHHHHHHHHcC
Confidence 76642 22333444444444
No 229
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.48 E-value=1.7 Score=46.53 Aligned_cols=94 Identities=9% Similarity=0.063 Sum_probs=58.8
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHH-HcCCEEEEEecCCC-ccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCC
Q psy15244 55 KTMEKILIAN-RSEVAIRVARACN-EMGIKSVGIYSEQD-KFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNV 131 (1427)
Q Consensus 55 ~~~kkVLIag-rGeia~riiraa~-elGi~~vav~s~~d-~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~v 131 (1427)
+|||+|||.| .|.++..+++.+. +.|++++++..+++ ..............+. .+..|.+.+.++.+ ++
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~------~D~~d~~~~~~~~~--~~ 74 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIE------GSFQNPGXLEQAVT--NA 74 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEE------CCTTCHHHHHHHHT--TC
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEE------CCCCCHHHHHHHHc--CC
Confidence 4577899999 6999999999999 89999988876544 2211100111111111 13456777777775 68
Q ss_pred CEEEeCCCccc-ccHHHHHHHHHCCC
Q psy15244 132 DAIHPGYGFLS-EREDFAKAVIGAGL 156 (1427)
Q Consensus 132 DaI~pg~gfls-E~~~~a~~~e~~Gi 156 (1427)
|.|+-..|... +...+.+.+.+.|.
T Consensus 75 d~vv~~ag~~n~~~~~~~~~~~~~~~ 100 (221)
T 3r6d_A 75 EVVFVGAMESGSDMASIVKALSRXNI 100 (221)
T ss_dssp SEEEESCCCCHHHHHHHHHHHHHTTC
T ss_pred CEEEEcCCCCChhHHHHHHHHHhcCC
Confidence 99987665311 12345666777765
No 230
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=89.47 E-value=2.2 Score=46.65 Aligned_cols=158 Identities=16% Similarity=0.107 Sum_probs=100.6
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
.+.++.+++++.+-+ .|+..+|+. +-..+..+.++.+++..|+.. .|...+ -+| .
T Consensus 26 ~~~~~~~~~~~al~~--gGv~~iel~----------~k~~~~~~~i~~l~~~~~~l~-----vgaGtv-----l~~---d 80 (224)
T 1vhc_A 26 DNADDILPLADTLAK--NGLSVAEIT----------FRSEAAADAIRLLRANRPDFL-----IAAGTV-----LTA---E 80 (224)
T ss_dssp SSGGGHHHHHHHHHH--TTCCEEEEE----------TTSTTHHHHHHHHHHHCTTCE-----EEEESC-----CSH---H
T ss_pred CCHHHHHHHHHHHHH--cCCCEEEEe----------ccCchHHHHHHHHHHhCcCcE-----EeeCcE-----eeH---H
Confidence 355778899999988 799999985 234566778888999888543 221111 122 4
Q ss_pred HHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q psy15244 758 FCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVL 837 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i 837 (1427)
.++.|.++|.|.+..- -.| ...++.+++.|. ..-.. .+|+.. +.++.++|+|.|
T Consensus 81 ~~~~A~~aGAd~v~~p--~~d----~~v~~~ar~~g~---~~i~G-------------v~t~~e----~~~A~~~Gad~v 134 (224)
T 1vhc_A 81 QVVLAKSSGADFVVTP--GLN----PKIVKLCQDLNF---PITPG-------------VNNPMA----IEIALEMGISAV 134 (224)
T ss_dssp HHHHHHHHTCSEEECS--SCC----HHHHHHHHHTTC---CEECE-------------ECSHHH----HHHHHHTTCCEE
T ss_pred HHHHHHHCCCCEEEEC--CCC----HHHHHHHHHhCC---CEEec-------------cCCHHH----HHHHHHCCCCEE
Confidence 4899999999998533 233 335667888877 22111 133333 355678999998
Q ss_pred EEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHh-cCCEEE
Q psy15244 838 CLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKA-GADIVD 894 (1427)
Q Consensus 838 ~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~A-Gad~VD 894 (1427)
.+-= ..+..-.+.++.++..+|++|+-. +-|....|+-.-+++ |++.|-
T Consensus 135 k~Fp----a~~~gG~~~lk~l~~~~~~ipvva----iGGI~~~N~~~~l~agga~~v~ 184 (224)
T 1vhc_A 135 KFFP----AEASGGVKMIKALLGPYAQLQIMP----TGGIGLHNIRDYLAIPNIVACG 184 (224)
T ss_dssp EETT----TTTTTHHHHHHHHHTTTTTCEEEE----BSSCCTTTHHHHHTSTTBCCEE
T ss_pred EEee----CccccCHHHHHHHHhhCCCCeEEE----ECCcCHHHHHHHHhcCCCEEEE
Confidence 8821 011111467888888888888743 235556677777887 766653
No 231
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=89.41 E-value=1.9 Score=43.71 Aligned_cols=101 Identities=14% Similarity=0.100 Sum_probs=65.3
Q ss_pred CCEEEEEcC----CHHHHHHHHHHHHcCCEEEEEecCC--Ccc---Cccc------cccceEEEcCCCCCcccCCCCHHH
Q psy15244 57 MEKILIANR----SEVAIRVARACNEMGIKSVGIYSEQ--DKF---SAHR------TKVDQAFLVGKGMPPVAAYLNIPE 121 (1427)
Q Consensus 57 ~kkVLIagr----Geia~riiraa~elGi~~vav~s~~--d~~---s~~~------~~aDe~~~i~~~~~~~~~yldi~~ 121 (1427)
.++|.|+|- |-++..+++.+.+.|++++.+.... +.. ..+. .-+|-++..- + + ....+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~v----p--~-~~v~~ 85 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFR----N--S-EAAWG 85 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCS----C--S-THHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEe----C--H-HHHHH
Confidence 457999997 6789999999999999977776544 211 0000 1123222211 1 1 23556
Q ss_pred HHHHHHhcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHH
Q psy15244 122 IICIAKNNNVDAIHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVL 166 (1427)
Q Consensus 122 Ii~ia~~~~vDaI~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai 166 (1427)
+++-+.+.++.+|+...+.. ..++++++++.|+.++||.---+
T Consensus 86 v~~~~~~~g~~~i~i~~~~~--~~~l~~~a~~~Gi~~igpnc~g~ 128 (145)
T 2duw_A 86 VAQEAIAIGAKTLWLQLGVI--NEQAAVLAREAGLSVVMDRCPAI 128 (145)
T ss_dssp HHHHHHHHTCCEEECCTTCC--CHHHHHHHHTTTCEEECSCCHHH
T ss_pred HHHHHHHcCCCEEEEcCChH--HHHHHHHHHHcCCEEEcCCeeeE
Confidence 66656667888888665543 56788999999999999875443
No 232
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=89.36 E-value=4.7 Score=44.63 Aligned_cols=198 Identities=11% Similarity=0.008 Sum_probs=104.8
Q ss_pred HHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecc-cccc----cccCCCc----
Q psy15244 682 DLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRG-NSLV----GYSNYSP---- 752 (1427)
Q Consensus 682 d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg-~n~v----gy~~~~~---- 752 (1427)
+....++.+.+ .|++.||+|++. +...++++.+.+.. +..+..+.-. .+.. ++..-|+
T Consensus 24 ~~~~~l~~~~~--~G~~~vEl~~~~----------~~~~~~~~~~l~~~-gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 90 (269)
T 3ngf_A 24 PFLERFRLAAE--AGFGGVEFLFPY----------DFDADVIARELKQH-NLTQVLFNMPPGDWAAGERGMAAISGREQE 90 (269)
T ss_dssp CHHHHHHHHHH--TTCSEEECSCCT----------TSCHHHHHHHHHHT-TCEEEEEECCCSCTTTTCCBCTTCTTCHHH
T ss_pred CHHHHHHHHHH--cCCCEEEecCCc----------cCCHHHHHHHHHHc-CCcEEEEecCCCccccCCCCcCCCccHHHH
Confidence 34455555666 699999998642 12244444433322 2333322111 0110 1111222
Q ss_pred --chHHHHHHHHHhcCCCEEEEeccC----Ch-------HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCH
Q psy15244 753 --AEVGAFCRLASQAGIDIFRVFDPL----NS-------VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSL 819 (1427)
Q Consensus 753 --nvv~~~v~~a~~~Gid~~rif~~~----nd-------~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~ 819 (1427)
+..+..++.|.+.|++.+++.... +. .+.++...+.+++.|. .+ ++.....+..|...-.+.
T Consensus 91 ~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv---~l--~lE~~n~~~~~~~~~~~~ 165 (269)
T 3ngf_A 91 FRDNVDIALHYALALDCRTLHAMSGITEGLDRKACEETFIENFRYAADKLAPHGI---TV--LVEPLNTRNMPGYFIVHQ 165 (269)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCBCBCTTSCHHHHHHHHHHHHHHHHHHHGGGTC---EE--EECCCCTTTSTTBSCCCH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC---EE--EEeeCCcccCccchhcCH
Confidence 235667888999999999886541 11 2456667777888887 22 222111000112223577
Q ss_pred HHHHHHHHHHHHCCCCEEE-EccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccc
Q psy15244 820 NYYEDLAKQLVESGAQVLC-LKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAAD 898 (1427)
Q Consensus 820 ~~~~~~a~~l~~~Gad~i~-i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~ 898 (1427)
+.+.++++.+ |.+.+. .-|+.=+..- -.+....++.. .+--.++|.||..|- .
T Consensus 166 ~~~~~l~~~v---~~~~vg~~~D~~h~~~~--g~d~~~~l~~~-~~~i~~vHl~D~~~r--------------------~ 219 (269)
T 3ngf_A 166 LEAVGLVKRV---NRPNVAVQLDLYHAQIM--DGDLTRLIEKM-NGAFSHVQIASVPDR--------------------H 219 (269)
T ss_dssp HHHHHHHHHH---CCTTEEEEEEHHHHHHH--TCCHHHHHHHT-TTSEEEEEECCTTTC--------------------C
T ss_pred HHHHHHHHHh---CCCCCCeEEEhhhHHhh--CCCHHHHHHHh-hhhEEEEEEecCCCC--------------------C
Confidence 7777777665 433333 3465422210 01233334433 355579999997531 1
Q ss_pred cCCCCCCCCcHHHHHHHHHhCCCCCCC
Q psy15244 899 SMSGICSQPAMGTIVSCLENTDKRCGI 925 (1427)
Q Consensus 899 GmG~~tgn~~lE~vv~~L~~~g~~tgi 925 (1427)
-.| .|.-+...++..|+..|++--+
T Consensus 220 ~~G--~G~id~~~~~~~L~~~gy~g~i 244 (269)
T 3ngf_A 220 EPD--EGELNYPYLFSVLESVGYRGWV 244 (269)
T ss_dssp CTT--SSSBCHHHHHHHHHHTTCCSEE
T ss_pred CCC--CCccCHHHHHHHHHHcCCCceE
Confidence 233 6788999999999998776433
No 233
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=89.22 E-value=2.4 Score=48.75 Aligned_cols=191 Identities=15% Similarity=0.150 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHhhcCCccE-EeccCCCchhhhhhccccChH-HHHHHHHHhCCCCceeeee-cccccccccCCCcchHH
Q psy15244 680 TYDLKKVSPFVANRFNNLYS-LEMWGGAVSHTCLKFLKECPW-ERLAELRELIPNIPFQMIL-RGNSLVGYSNYSPAEVG 756 (1427)
Q Consensus 680 t~d~l~ia~~l~~~~~G~~~-iE~~ggatfd~~~rfl~e~p~-erl~~lr~~~p~~~~qml~-Rg~n~vgy~~~~~nvv~ 756 (1427)
.+....|.+.-.+ .+-.. |.+..| +..|.....+ ..++.+.+...++|+.+.+ -|. + .
T Consensus 28 ~e~~~Ail~AAee--~~sPvIlq~s~g-----~~~y~g~~~~~~~v~~aa~~~~~VPValHlDHg~---------~---~ 88 (323)
T 2isw_A 28 MEQIQGIMKAVVQ--LKSPVILQCSRG-----ALKYSDMIYLKKLCEAALEKHPDIPICIHLDHGD---------T---L 88 (323)
T ss_dssp HHHHHHHHHHHHH--TTCCEEEEEEHH-----HHHHTTTHHHHHHHHHHHHHCTTSCEEEEEEEEC---------S---H
T ss_pred HHHHHHHHHHHHH--hCCCEEEECChh-----HHHhCCHHHHHHHHHHHHHhcCCCcEEEECCCCC---------C---H
Confidence 3445555555555 33332 444322 2344432222 2234444444667766543 232 1 3
Q ss_pred HHHHHHHhcCCCEEEEeccCChH----HHHHHHHHHHHHhcCCCcEEEEEEEeeccCC---CCCCCCCCHHHHHHHHHHH
Q psy15244 757 AFCRLASQAGIDIFRVFDPLNSV----PNLVKGMDAVQQVTGGSTIVEATICYAGDLT---NPNKKKYSLNYYEDLAKQL 829 (1427)
Q Consensus 757 ~~v~~a~~~Gid~~rif~~~nd~----~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~---~p~~~~~~~~~~~~~a~~l 829 (1427)
+.+.+|.++|.+.+-+=.|--++ +.-++.+++++..|. .||+-|-..+..- +.+...++++...+++++
T Consensus 89 e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gv---sVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~- 164 (323)
T 2isw_A 89 ESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSV---SVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVEL- 164 (323)
T ss_dssp HHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTC---EEEEEESCC----------CCCCCHHHHHHHHHH-
T ss_pred HHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCC---eEEEEeCCccCCccCcccccccCCHHHHHHHHHH-
Confidence 45889999999887554444443 345677888888888 8888776654211 112234778888877765
Q ss_pred HHCCCCEEEEc--cccCcCC----HH--HHHHHHHHHHHHcCCceEEEeec-------------------CCcchHHHHH
Q psy15244 830 VESGAQVLCLK--DMAGLLK----PT--AAKLLIGSFREKYPNILIHVHTH-------------------DMAGTGVATT 882 (1427)
Q Consensus 830 ~~~Gad~i~i~--Dt~G~l~----P~--~~~~lv~~lr~~~p~ipi~~H~H-------------------nd~GlA~An~ 882 (1427)
.|+|.|.++ -.=|.-+ |. --.++++.+++.+ ++||-+|.= ++.|......
T Consensus 165 --TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~-~vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i 241 (323)
T 2isw_A 165 --TGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT-GIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESI 241 (323)
T ss_dssp --HCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH-CSCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHH
T ss_pred --HCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHh-CCCeEEECCCCCCHHHHHHHHHhccccccCCCCCHHHH
Confidence 599987765 2334433 33 2246788889888 899999983 3668888888
Q ss_pred HHHHHhcCCEEEec
Q psy15244 883 LACVKAGADIVDVA 896 (1427)
Q Consensus 883 laAi~AGad~VD~a 896 (1427)
..|+..|+.-|+..
T Consensus 242 ~~ai~~GV~KiNi~ 255 (323)
T 2isw_A 242 VHAIGEGVCKINVD 255 (323)
T ss_dssp HHHHHTTEEEEEEC
T ss_pred HHHHHCCCeEEEEC
Confidence 88888888777664
No 234
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=89.06 E-value=5.6 Score=45.47 Aligned_cols=129 Identities=16% Similarity=0.167 Sum_probs=85.8
Q ss_pred HHHHHHHHHhcCCC---EEEEeccC----------ChHHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHH
Q psy15244 755 VGAFCRLASQAGID---IFRVFDPL----------NSVPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLN 820 (1427)
Q Consensus 755 v~~~v~~a~~~Gid---~~rif~~~----------nd~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~ 820 (1427)
..+.++++.+.|+| .+.|-.+. .+.+++.+.++.+++. +. -+.+ -. .++ .+.+
T Consensus 108 ~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~---Pv~v--K~-----~~~---~~~~ 174 (314)
T 2e6f_A 108 NVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGL---PFGV--KM-----PPY---FDIA 174 (314)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCS---CEEE--EE-----CCC---CCHH
T ss_pred HHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCC---CEEE--EE-----CCC---CCHH
Confidence 34455666677889 77775431 1667788888888876 44 2221 11 232 4678
Q ss_pred HHHHHHHHHHHCC-CCEEEEccccC----------------------cC----CHHHHHHHHHHHHHHcCCceEEEeecC
Q psy15244 821 YYEDLAKQLVESG-AQVLCLKDMAG----------------------LL----KPTAAKLLIGSFREKYPNILIHVHTHD 873 (1427)
Q Consensus 821 ~~~~~a~~l~~~G-ad~i~i~Dt~G----------------------~l----~P~~~~~lv~~lr~~~p~ipi~~H~Hn 873 (1427)
.+.++++.+.++| +|.|.+.++.| +. .| ...++++.+++.+|++||-.=.--
T Consensus 175 ~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p-~~~~~i~~v~~~~~~ipvi~~GGI 253 (314)
T 2e6f_A 175 HFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILP-TALANVNAFYRRCPDKLVFGCGGV 253 (314)
T ss_dssp HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHH-HHHHHHHHHHHHCTTSEEEEESSC
T ss_pred HHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccH-HHHHHHHHHHHhcCCCCEEEECCC
Confidence 8899999999999 99998877652 11 12 345788999988878998765433
Q ss_pred CcchHHHHHHHHHHhcCCEEEeccccC
Q psy15244 874 MAGTGVATTLACVKAGADIVDVAADSM 900 (1427)
Q Consensus 874 d~GlA~An~laAi~AGad~VD~av~Gm 900 (1427)
..+ ..+.+++.+|||.|-.+-.=+
T Consensus 254 ~~~---~da~~~l~~GAd~V~ig~~~l 277 (314)
T 2e6f_A 254 YSG---EDAFLHILAGASMVQVGTALQ 277 (314)
T ss_dssp CSH---HHHHHHHHHTCSSEEECHHHH
T ss_pred CCH---HHHHHHHHcCCCEEEEchhhH
Confidence 333 355666788999986654433
No 235
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=89.02 E-value=0.45 Score=50.02 Aligned_cols=56 Identities=25% Similarity=0.261 Sum_probs=33.0
Q ss_pred EEEEecCCCEEecCCEEEEEEc--C-----CceeeeecCCCeEEEEEEecCCCeeCCCC-EEEEE
Q psy15244 1369 IEVKVKVGQQVKKNDVLIVMSV--M-----KTETLIHASADGVVKEIFVEVGGQVAQND-LVVVL 1425 (1427)
Q Consensus 1369 ~~v~V~~Gd~V~~G~~l~~iea--m-----Kme~~i~Ap~~G~V~~i~v~~G~~V~~g~-~L~~i 1425 (1427)
.+++|++||+|++||+|+...- . .+.++|.-.-......+....| .|.+|+ +|+.+
T Consensus 118 F~~~V~~Gd~Vk~Gd~L~~fD~~~Ik~~g~~~~tpvvvtN~~~~~~~~~~~g-~V~~g~~~~~~v 181 (183)
T 3our_B 118 FTRIAEEGQTVKAGDTVIEFDLALLEEKAKSTLTPVVISNMDEIKELNKLSG-SVVVGETPVLRV 181 (183)
T ss_dssp EEECSCTTCEECTTCEEEEECHHHHHHHSSBCCEEEEESCGGGCSEEEECCS-EECTTTSEEEEE
T ss_pred ceEEEeCcCEEcCCCEEEEECHHHHHHcCCCCeEEEEEEcchhcceEeeccC-cEeCCCEEEEEE
Confidence 3689999999999999998852 1 1333333222222223334444 577776 44444
No 236
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=88.77 E-value=1.5 Score=47.93 Aligned_cols=190 Identities=15% Similarity=0.156 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHhhcCCccEEecc--CCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHH
Q psy15244 681 YDLKKVSPFVANRFNNLYSLEMW--GGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAF 758 (1427)
Q Consensus 681 ~d~l~ia~~l~~~~~G~~~iE~~--ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~ 758 (1427)
.+..+.++.+.+ .|++.+|+. .|-.+. -+. .-.+.++.|++.. +.++...+ |.+ + ...+
T Consensus 23 ~~~~~~i~~~~~--~G~d~i~l~~~dg~f~~----~~~-~~~~~i~~l~~~~-~~~~~v~l-------~vn---d-~~~~ 83 (230)
T 1rpx_A 23 SKLGEQVKAIEQ--AGCDWIHVDVMDGRFVP----NIT-IGPLVVDSLRPIT-DLPLDVHL-------MIV---E-PDQR 83 (230)
T ss_dssp GGHHHHHHHHHH--TTCCCEEEEEEBSSSSS----CBC-CCHHHHHHHGGGC-CSCEEEEE-------ESS---S-HHHH
T ss_pred HHHHHHHHHHHH--CCCCEEEEeeccCCccc----ccc-cCHHHHHHHHhcc-CCcEEEEE-------Eec---C-HHHH
Confidence 356667777777 699888875 111101 122 2246777888765 33433322 111 1 3357
Q ss_pred HHHHHhcCCCEEEEecc--CChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCE
Q psy15244 759 CRLASQAGIDIFRVFDP--LNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQV 836 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~--~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~ 836 (1427)
++.+.++|+|.+.+-.. .. +.+...++.+++.|. .+-..+. |. .+.+.+.. + ..++|.
T Consensus 84 v~~~~~~Gad~v~vh~~~~~~--~~~~~~~~~~~~~g~---~ig~~~~-------p~---t~~e~~~~----~-~~~~d~ 143 (230)
T 1rpx_A 84 VPDFIKAGADIVSVHCEQSST--IHLHRTINQIKSLGA---KAGVVLN-------PG---TPLTAIEY----V-LDAVDL 143 (230)
T ss_dssp HHHHHHTTCSEEEEECSTTTC--SCHHHHHHHHHHTTS---EEEEEEC-------TT---CCGGGGTT----T-TTTCSE
T ss_pred HHHHHHcCCCEEEEEecCccc--hhHHHHHHHHHHcCC---cEEEEeC-------CC---CCHHHHHH----H-HhhCCE
Confidence 99999999999987765 33 345667777888887 5443322 21 22222211 1 247886
Q ss_pred EEEcccc-----CcCCHHHHHHHHHHHHHHcC----CceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCC
Q psy15244 837 LCLKDMA-----GLLKPTAAKLLIGSFREKYP----NILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQP 907 (1427)
Q Consensus 837 i~i~Dt~-----G~l~P~~~~~lv~~lr~~~p----~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~ 907 (1427)
| +.|+. |.-.+....+.++.+|+..+ ++||.+ +.|....|.-.++++||+.|.+.- ++ ...+
T Consensus 144 v-l~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v----~GGI~~~n~~~~~~aGad~vvvgS-aI---~~a~ 214 (230)
T 1rpx_A 144 V-LIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEV----DGGVGPKNAYKVIEAGANALVAGS-AV---FGAP 214 (230)
T ss_dssp E-EEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEESH-HH---HTSS
T ss_pred E-EEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEE----ECCCCHHHHHHHHHcCCCEEEECh-hh---hCCC
Confidence 5 34554 22223344555666776553 677655 345555788888999999998773 22 2344
Q ss_pred cHHHHHHHHHh
Q psy15244 908 AMGTIVSCLEN 918 (1427)
Q Consensus 908 ~lE~vv~~L~~ 918 (1427)
+.++.+..|+.
T Consensus 215 dp~~a~~~l~~ 225 (230)
T 1rpx_A 215 DYAEAIKGIKT 225 (230)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 45555555543
No 237
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=88.61 E-value=5.2 Score=47.75 Aligned_cols=40 Identities=13% Similarity=0.123 Sum_probs=34.8
Q ss_pred HHHHHcCCce-EEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 857 SFREKYPNIL-IHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 857 ~lr~~~p~ip-i~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
.|++.+++.| +.+|.|+|.|..-.+..++++.|+..+++.
T Consensus 249 ~L~~~v~~~P~LVlhghStDy~~~e~l~~~V~~GiaklNVg 289 (450)
T 3txv_A 249 KLSATLGQLHGMVFEAHSTDYQTPDALRELVADGFAILKVG 289 (450)
T ss_dssp HHHHGGGTSTTCEEEESCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred HHHHHhccCCCEEEecCCCCCCCHHHHHHHHHcCCcEEEEC
Confidence 4455555678 999999999999999999999999999986
No 238
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=88.52 E-value=0.29 Score=57.16 Aligned_cols=59 Identities=8% Similarity=0.139 Sum_probs=47.3
Q ss_pred EEEEEecCCCEEecCCEEEEEEcC-CceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1368 IIEVKVKVGQQVKKNDVLIVMSVM-KTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1368 v~~v~V~~Gd~V~~G~~l~~ieam-Kme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
|.-..|+.|+....=..-..+++. .-+..|.++.+|+|.+++|++|+.|++||+|++|+
T Consensus 30 v~~~~v~~~~~~~~~~~~G~v~~~p~~~~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld 89 (359)
T 3lnn_A 30 LAVAPATRETVAAPFNLPAMIEADPAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTID 89 (359)
T ss_dssp CCEEECEEEEECCEEEEEEEEECCSSSEEEECCSSCEEEEECCSCTTCEECTTCEEEEEE
T ss_pred eEEEEeeecccceeEEEEEEEEECCCcEEEEeccCCEEEEEEEcCCCCEEcCCCEEEEEC
Confidence 334455566555555566778874 67889999999999999999999999999999986
No 239
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=88.49 E-value=3.6 Score=46.45 Aligned_cols=147 Identities=17% Similarity=0.102 Sum_probs=94.0
Q ss_pred cchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15244 752 PAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVE 831 (1427)
Q Consensus 752 ~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~ 831 (1427)
...+.+.+++|.+.|+.-+.|. .+++....+ ..+..+. .+.. .. +.|.. ..+.+--+.-++++.+
T Consensus 73 ~~dI~~lc~eA~~~g~aaVCV~--P~~V~~a~~---~L~~s~V---~V~t----Vi--gFP~G-~~~~~~Kv~Ea~~Ai~ 137 (288)
T 3oa3_A 73 GSQIDVLCAEAKEYGFATVCVR--PDYVSRAVQ---YLQGTQV---GVTC----VI--GFHEG-TYSTDQKVSEAKRAMQ 137 (288)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEC--GGGHHHHHH---HTTTSSC---EEEE----EE--STTTS-CSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcEEEEC--HHHHHHHHH---HcCCCCC---eEEE----Ee--CCCCC-CCcHHHHHHHHHHHHH
Confidence 3447788999999999988876 345544433 3332333 3322 22 34432 4556666777889999
Q ss_pred CCCCEEEEccccCcC---CHHHHHHHHHHHHHHcCC--ce--EEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCC
Q psy15244 832 SGAQVLCLKDMAGLL---KPTAAKLLIGSFREKYPN--IL--IHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGIC 904 (1427)
Q Consensus 832 ~Gad~i~i~Dt~G~l---~P~~~~~lv~~lr~~~p~--ip--i~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~t 904 (1427)
.|||.|-+.=-.|.+ .-..+++-|.++++..++ +. |+....++--.. ..+..|+++|||+|-++ .|++ +
T Consensus 138 ~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~-~A~~ia~eaGADfVKTS-TGf~--~ 213 (288)
T 3oa3_A 138 NGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEII-AGCVLSSLAGADYVKTS-TGFN--G 213 (288)
T ss_dssp TTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHH-HHHHHHHHTTCSEEECC-CSSS--S
T ss_pred cCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHH-HHHHHHHHcCCCEEEcC-CCCC--C
Confidence 999998866455653 336788889999988632 23 233333433333 34667889999999999 6765 5
Q ss_pred CCCcHHHHHHHHH
Q psy15244 905 SQPAMGTIVSCLE 917 (1427)
Q Consensus 905 gn~~lE~vv~~L~ 917 (1427)
+.+.++++..+.+
T Consensus 214 ~GAT~edv~lmr~ 226 (288)
T 3oa3_A 214 PGASIENVSLMSA 226 (288)
T ss_dssp CCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 6777777655444
No 240
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=88.44 E-value=7.4 Score=44.39 Aligned_cols=201 Identities=8% Similarity=0.037 Sum_probs=110.4
Q ss_pred EeecC----cccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhC---CCC
Q psy15244 661 LTDTT----FRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELI---PNI 733 (1427)
Q Consensus 661 i~DtT----lRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~---p~~ 733 (1427)
.+.+| |+||.+. .+.+..++.|..+-+ .|.+.|++++|+..-. .+..++|+-.+-+.. .++
T Consensus 18 riNvTg~~sf~~~~~~-----~~~~~a~~~A~~~v~--~GAdiIDIg~g~~~v~-----~~eem~rvv~~i~~~~~~~~v 85 (300)
T 3k13_A 18 RCNVAGSRKFLRLVNE-----KKYDEALSIARQQVE--DGALVIDVNMDDGLLD-----ARTEMTTFLNLIMSEPEIARV 85 (300)
T ss_dssp EEETTTCHHHHHHHHT-----TCHHHHHHHHHHHHH--TTCSEEEEECCCTTSC-----HHHHHHHHHHHHHTCHHHHTS
T ss_pred eccCCCCHHHHHHHhc-----CCHHHHHHHHHHHHH--CCCCEEEECCCCCCCC-----HHHHHHHHHHHHHHhhhcCCC
Confidence 45666 7888653 456889999998887 7999999998764210 112233433222221 345
Q ss_pred ceeeeecccccccccCCCcchHHHHHHHHHh--cCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCC
Q psy15244 734 PFQMILRGNSLVGYSNYSPAEVGAFCRLASQ--AGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTN 811 (1427)
Q Consensus 734 ~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~--~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~ 811 (1427)
+++.=. + .-+.+++|.+ .|.+++.=......=+++....+.+++.|. -+ +.+++.+ =+.
T Consensus 86 pisIDT----------~----~~~V~eaaL~~~~Ga~iINdIs~~~~d~~~~~~~~l~a~~ga---~v-V~mh~d~-~G~ 146 (300)
T 3k13_A 86 PVMIDS----------S----KWEVIEAGLKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGA---AT-VVMAFDE-KGQ 146 (300)
T ss_dssp CEEEEC----------S----CHHHHHHHHHHCSSCCEEEEECSTTCHHHHHHHHHHHHHHTC---EE-EEESEET-TEE
T ss_pred eEEEeC----------C----CHHHHHHHHHhcCCCCEEEeCCcccCChhHHHHHHHHHHhCC---eE-EEEeeCC-CCC
Confidence 544321 2 2344677777 799887655444434466677888888887 32 2233310 022
Q ss_pred CCCCCCCHHHHHHHHHHH-HHCCCC--EEEEccc-cC-cCC-HHH----HHHH---HHHHHHHcCCceEEEeecC-Ccch
Q psy15244 812 PNKKKYSLNYYEDLAKQL-VESGAQ--VLCLKDM-AG-LLK-PTA----AKLL---IGSFREKYPNILIHVHTHD-MAGT 877 (1427)
Q Consensus 812 p~~~~~~~~~~~~~a~~l-~~~Gad--~i~i~Dt-~G-~l~-P~~----~~~l---v~~lr~~~p~ipi~~H~Hn-d~Gl 877 (1427)
|..-.-..+...++.+.+ .++|+. .|.| |. .| ..+ ..+ ..++ ++.+|+.+|++|+-+=..| .+|+
T Consensus 147 p~t~~~~~~i~~r~~~~~~~~~Gi~~~~Iil-DPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg~pvl~G~SnkSfgl 225 (300)
T 3k13_A 147 ADTAARKIEVCERAYRLLVDKVGFNPHDIIF-DPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLSFSF 225 (300)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTCCCGGGEEE-ECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBGGGGGGGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEE-eCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCCCCEEEEECcccccC
Confidence 321001123333444444 678983 4443 32 22 222 222 3344 4556667889997665544 3454
Q ss_pred H----------HHHHHHHHHhcCCEE
Q psy15244 878 G----------VATTLACVKAGADIV 893 (1427)
Q Consensus 878 A----------~An~laAi~AGad~V 893 (1427)
- .+-...|+++|.|..
T Consensus 226 p~~~~~R~~~n~~fl~~ai~~Gld~~ 251 (300)
T 3k13_A 226 RGNNYIREAMHAVFLYHAIQQGMDMG 251 (300)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCcchhHHHHHHHHHHHHHcCCCEE
Confidence 2 123447899999853
No 241
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=88.34 E-value=8.1 Score=43.33 Aligned_cols=144 Identities=10% Similarity=0.097 Sum_probs=84.6
Q ss_pred HHHHHHHHHhcCCCEEEEeccCChH-------H--------------HHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCC
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPLNSV-------P--------------NLVKGMDAVQQVTGGSTIVEATICYAGDLTNPN 813 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~nd~-------~--------------~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~ 813 (1427)
..+.++...++|+|++.+-.+.||. + .+-..++.+|+.+.. .--..+.|
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~--~Pivlm~Y-------- 103 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPD--MPIGLLLY-------- 103 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--CCEEEEEC--------
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC--CCEEEEec--------
Confidence 4556788888999999999888862 2 223445555654221 11112222
Q ss_pred CCCCCHHH---HHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcC
Q psy15244 814 KKKYSLNY---YEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGA 890 (1427)
Q Consensus 814 ~~~~~~~~---~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGa 890 (1427)
+++-| +.++++.+.++|+|.+.+.| +.|++..+++..+++. ++...+=+=.+.-. .......+.+-
T Consensus 104 ---~npv~~~g~e~f~~~~~~aGvdgvii~D----lp~ee~~~~~~~~~~~--gl~~i~liaP~t~~--eri~~i~~~~~ 172 (267)
T 3vnd_A 104 ---ANLVFANGIDEFYTKAQAAGVDSVLIAD----VPVEESAPFSKAAKAH--GIAPIFIAPPNADA--DTLKMVSEQGE 172 (267)
T ss_dssp ---HHHHHHHCHHHHHHHHHHHTCCEEEETT----SCGGGCHHHHHHHHHT--TCEEECEECTTCCH--HHHHHHHHHCC
T ss_pred ---CcHHHHhhHHHHHHHHHHcCCCEEEeCC----CCHhhHHHHHHHHHHc--CCeEEEEECCCCCH--HHHHHHHHhCC
Confidence 23322 26678888999999999998 6678889999998876 45544333333332 23333444455
Q ss_pred CEEEe-cccc-CCCCCCC-CcHHHHHHHHHhC
Q psy15244 891 DIVDV-AADS-MSGICSQ-PAMGTIVSCLENT 919 (1427)
Q Consensus 891 d~VD~-av~G-mG~~tgn-~~lE~vv~~L~~~ 919 (1427)
+.|-+ |+.| -|.+++. +.+.+++..++..
T Consensus 173 gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~ 204 (267)
T 3vnd_A 173 GYTYLLSRAGVTGTESKAGEPIENILTQLAEF 204 (267)
T ss_dssp SCEEESCCCCCC--------CHHHHHHHHHTT
T ss_pred CcEEEEecCCCCCCccCCcHHHHHHHHHHHHh
Confidence 56666 6666 3444433 3467777777754
No 242
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=88.30 E-value=12 Score=41.81 Aligned_cols=142 Identities=11% Similarity=0.100 Sum_probs=77.8
Q ss_pred hHHHHHHHHHhcCCCEEEEeccCChH---------------------HHHHHHHHHHHHh--cCCCcEEEEEEEeeccCC
Q psy15244 754 EVGAFCRLASQAGIDIFRVFDPLNSV---------------------PNLVKGMDAVQQV--TGGSTIVEATICYAGDLT 810 (1427)
Q Consensus 754 vv~~~v~~a~~~Gid~~rif~~~nd~---------------------~~~~~~i~~a~~~--G~~~~~v~~~i~~t~d~~ 810 (1427)
...+.++...++|+|.+-+-.+.+|- +.+-..++.+++. .. -+ +.++
T Consensus 32 ~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~---Pi---~~m~---- 101 (262)
T 2ekc_A 32 TSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDI---PF---LLMT---- 101 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS---CE---EEEC----
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC---CE---EEEe----
Confidence 34556777788999999999888851 1233446666655 33 11 1122
Q ss_pred CCCCCCCCHHHH---HHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCce-EEEeecCCcchHHHHHHHHH
Q psy15244 811 NPNKKKYSLNYY---EDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNIL-IHVHTHDMAGTGVATTLACV 886 (1427)
Q Consensus 811 ~p~~~~~~~~~~---~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ip-i~~H~Hnd~GlA~An~laAi 886 (1427)
.+++-+- .+.++.+.++|+|.+.+.| +.++++.++++.+++. ++. |.+-.+++.. .-...+++.
T Consensus 102 -----y~n~v~~~g~~~f~~~~~~aG~dgvii~d----l~~ee~~~~~~~~~~~--gl~~i~l~~p~t~~-~rl~~ia~~ 169 (262)
T 2ekc_A 102 -----YYNPIFRIGLEKFCRLSREKGIDGFIVPD----LPPEEAEELKAVMKKY--VLSFVPLGAPTSTR-KRIKLICEA 169 (262)
T ss_dssp -----CHHHHHHHCHHHHHHHHHHTTCCEEECTT----CCHHHHHHHHHHHHHT--TCEECCEECTTCCH-HHHHHHHHH
T ss_pred -----cCcHHHHhhHHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHHHHc--CCcEEEEeCCCCCH-HHHHHHHHh
Confidence 1222121 4677888999999999988 4468888899888875 344 3344454432 222233333
Q ss_pred HhcCCEEEeccccC-CCCCCCC--cHHHHHHHHHh
Q psy15244 887 KAGADIVDVAADSM-SGICSQP--AMGTIVSCLEN 918 (1427)
Q Consensus 887 ~AGad~VD~av~Gm-G~~tgn~--~lE~vv~~L~~ 918 (1427)
..|.-+.. ++.|. |.+++.+ ++.+++..++.
T Consensus 170 a~gfiy~v-s~~g~TG~~~~~~~~~~~~~v~~vr~ 203 (262)
T 2ekc_A 170 ADEMTYFV-SVTGTTGAREKLPYERIKKKVEEYRE 203 (262)
T ss_dssp CSSCEEEE-SSCC---------CHHHHHHHHHHHH
T ss_pred CCCCEEEE-ecCCccCCCCCcCcccHHHHHHHHHh
Confidence 34543222 44433 3333332 24456666664
No 243
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=88.18 E-value=7.9 Score=42.64 Aligned_cols=178 Identities=12% Similarity=0.132 Sum_probs=103.1
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCC--ceeeeecccccccc--cCCCcc
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNI--PFQMILRGNSLVGY--SNYSPA 753 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~--~~qml~Rg~n~vgy--~~~~~n 753 (1427)
.+.+|+.++++...+ -|+.++-+..+. ++..++.+.++ ++.. .+|| ...+..
T Consensus 40 ~t~~~i~~lc~eA~~--~~~~aVcV~p~~----------------v~~a~~~L~~s~v~v~t------VigFP~G~~~~~ 95 (239)
T 3ngj_A 40 ATEEQIRKLCSEAAE--YKFASVCVNPTW----------------VPLCAELLKGTGVKVCT------VIGFPLGATPSE 95 (239)
T ss_dssp CCHHHHHHHHHHHHH--HTCSEEEECGGG----------------HHHHHHHHTTSSCEEEE------EESTTTCCSCHH
T ss_pred CCHHHHHHHHHHHHh--cCCcEEEECHHH----------------HHHHHHHhCCCCCeEEE------EeccCCCCCchH
Confidence 567888888887776 488888775321 22233333333 3332 3455 334555
Q ss_pred hHHHHHHHHHhcCCCEEEEeccCChH-----HHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHH
Q psy15244 754 EVGAFCRLASQAGIDIFRVFDPLNSV-----PNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAK 827 (1427)
Q Consensus 754 vv~~~v~~a~~~Gid~~rif~~~nd~-----~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~ 827 (1427)
+.-.-++.|++.|.|.+-+......+ +.+..-+..++++ +. ..+-+- -=++ ..+.+.+...++
T Consensus 96 ~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~--~~lKVI-lEt~--------~Lt~eei~~a~~ 164 (239)
T 3ngj_A 96 VKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGK--ALTKVI-IECC--------YLTNEEKVEVCK 164 (239)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTT--SEEEEE-CCGG--------GSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcC--CceEEE-EecC--------CCCHHHHHHHHH
Confidence 55556888999999999888776532 3333333333332 22 133332 1121 357888999999
Q ss_pred HHHHCCCCEEEEcc--ccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 828 QLVESGAQVLCLKD--MAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 828 ~l~~~Gad~i~i~D--t~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
.+.++|||.|--.- +.|-.++.++..+-+.+.. .++|-.=. --- ....+++-+++||+.|=+|
T Consensus 165 ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~---~v~VKasG--GIr-t~~da~~~i~aGA~riGtS 229 (239)
T 3ngj_A 165 RCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTVGD---KALVKAAG--GIR-TFDDAMKMINNGASRIGAS 229 (239)
T ss_dssp HHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHGG---GSEEEEES--SCC-SHHHHHHHHHTTEEEEEES
T ss_pred HHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhhCC---CceEEEeC--CCC-CHHHHHHHHHhcccceecc
Confidence 99999999876441 1345667766654443322 23332211 000 1267788889999988554
No 244
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=88.17 E-value=4.4 Score=46.13 Aligned_cols=188 Identities=15% Similarity=0.082 Sum_probs=102.2
Q ss_pred EEEEEEEeeccCCCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEcc-cc--C---cCCHHHHHHHHHHHHHHcC-CceEEE
Q psy15244 798 IVEATICYAGDLTNPNKKKY-SLNYYEDLAKQLVESGAQVLCLKD-MA--G---LLKPTAAKLLIGSFREKYP-NILIHV 869 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~-~~~~~~~~a~~l~~~Gad~i~i~D-t~--G---~l~P~~~~~lv~~lr~~~p-~ipi~~ 869 (1427)
.+.+-+..|-|=++ |.++| +.+..++.++++.+.|||+|-|.= ++ | +-..+++.+++..++.... ++||.+
T Consensus 24 ~iMgilNvTPDSFs-dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSI 102 (294)
T 2y5s_A 24 LVMGILNATPDSFS-DGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSI 102 (294)
T ss_dssp EEEEEEECCC-----------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEE
T ss_pred eEEEEEeCCCCCCC-CCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 55666676654211 34555 789999999999999999998763 11 2 2224556666655554321 789988
Q ss_pred eecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh------C-CCC-------CCC-C--hhhHHH
Q psy15244 870 HTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN------T-DKR-------CGI-D--LHDVCD 932 (1427)
Q Consensus 870 H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~------~-g~~-------tgi-d--l~~L~~ 932 (1427)
-+=+ ...+.+|+++|+++|+-...+ . -+.+-.+++-... . |.. +.+ | .+.+..
T Consensus 103 DT~~-----~~Va~aAl~aGa~iINdVsg~----~-d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~ 172 (294)
T 2y5s_A 103 DTYK-----PAVMRAALAAGADLINDIWGF----R-QPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDF 172 (294)
T ss_dssp ECCC-----HHHHHHHHHHTCSEEEETTTT----C-STTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHH
T ss_pred ECCC-----HHHHHHHHHcCCCEEEECCCC----C-chHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHH
Confidence 6554 455678999999999754332 1 3444443322110 0 111 111 1 233555
Q ss_pred HHHHHHHHhCCCCCCCCcccccchhhhhHH-HHHHHHHHhhhhcC-----CCCCCCCCcCcccEEEecCC
Q psy15244 933 YSSYWRKVRELYAPAHNLLWRCGIDLHDVC-DYSSYWRKVRELYA-----PFECTDLKAASSEAYLYEIP 996 (1427)
Q Consensus 933 l~~~v~~~~g~~~~~~kpivG~~~f~~~~~-~~~~~~~~~~~~Y~-----~f~~~~~~g~~~~v~~~~~p 996 (1427)
+.+.++.....-+++++=++--++.--+.. .|.-.+.+.-..+. .+.+|-+.|.++.-+++++-
T Consensus 173 l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~~~n~~ll~~l~~l~~~~~~~~g~Pvl~G~Srksfig~l~ 242 (294)
T 2y5s_A 173 LAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVI 242 (294)
T ss_dssp HHHHHHHHHHTTCCGGGEEEECCTTSSSCTTHHHHHHHHTGGGGSCBCTTSSBCCBEEECTTCHHHHTTT
T ss_pred HHHHHHHHHHcCCChhhEEEeCCCcccccchHHHHHHHHHHHHHHhccccCCCCCEEEEecccHHhhhhc
Confidence 666666665555665553332222222333 55555555444455 55557777777765555553
No 245
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=88.12 E-value=3.2 Score=45.42 Aligned_cols=154 Identities=15% Similarity=0.083 Sum_probs=100.2
Q ss_pred CHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHH
Q psy15244 679 RTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAF 758 (1427)
Q Consensus 679 ~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~ 758 (1427)
+.++.+++++.+-+ .|+..+|+. +-..+..+.++.+++.+|+..+ |...+ - ....
T Consensus 36 ~~~~~~~~~~al~~--gGv~~iel~----------~k~~~~~~~i~~l~~~~~~~~i-----gagtv-----l---~~d~ 90 (225)
T 1mxs_A 36 REEDILPLADALAA--GGIRTLEVT----------LRSQHGLKAIQVLREQRPELCV-----GAGTV-----L---DRSM 90 (225)
T ss_dssp CGGGHHHHHHHHHH--TTCCEEEEE----------SSSTHHHHHHHHHHHHCTTSEE-----EEECC-----C---SHHH
T ss_pred CHHHHHHHHHHHHH--CCCCEEEEe----------cCCccHHHHHHHHHHhCcccEE-----eeCeE-----e---eHHH
Confidence 44678899999988 799999985 2233445667888888875432 22111 1 2245
Q ss_pred HHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q psy15244 759 CRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLC 838 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~ 838 (1427)
++.|.++|.|.++.- -.| ...++.++..|. ..-.. .+|+.. +.++.++|+|.|.
T Consensus 91 ~~~A~~aGAd~v~~p--~~d----~~v~~~~~~~g~---~~i~G-------------~~t~~e----~~~A~~~Gad~vk 144 (225)
T 1mxs_A 91 FAAVEAAGAQFVVTP--GIT----EDILEAGVDSEI---PLLPG-------------ISTPSE----IMMGYALGYRRFK 144 (225)
T ss_dssp HHHHHHHTCSSEECS--SCC----HHHHHHHHHCSS---CEECE-------------ECSHHH----HHHHHTTTCCEEE
T ss_pred HHHHHHCCCCEEEeC--CCC----HHHHHHHHHhCC---CEEEe-------------eCCHHH----HHHHHHCCCCEEE
Confidence 899999999998743 223 245566777776 22111 234333 3556689999998
Q ss_pred EccccCcCCHHH-H--HHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHH-hcCCEEE
Q psy15244 839 LKDMAGLLKPTA-A--KLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVK-AGADIVD 894 (1427)
Q Consensus 839 i~Dt~G~l~P~~-~--~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~-AGad~VD 894 (1427)
+ .|.. . .+.++.++..+|++|+-. +-|....|+-.-++ +|++.|=
T Consensus 145 ~-------FPa~~~~G~~~lk~i~~~~~~ipvva----iGGI~~~N~~~~l~~~Ga~~v~ 193 (225)
T 1mxs_A 145 L-------FPAEISGGVAAIKAFGGPFGDIRFCP----TGGVNPANVRNYMALPNVMCVG 193 (225)
T ss_dssp E-------TTHHHHTHHHHHHHHHTTTTTCEEEE----BSSCCTTTHHHHHHSTTBCCEE
T ss_pred E-------ccCccccCHHHHHHHHhhCCCCeEEE----ECCCCHHHHHHHHhccCCEEEE
Confidence 8 4432 2 477888888888888743 23555667777888 6888774
No 246
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=88.11 E-value=10 Score=42.29 Aligned_cols=195 Identities=9% Similarity=-0.017 Sum_probs=108.5
Q ss_pred EEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhC---CCCcee
Q psy15244 660 LLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELI---PNIPFQ 736 (1427)
Q Consensus 660 ~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~---p~~~~q 736 (1427)
.+|--.|.||.+ ..+.+..++.|..+-+ .|.+.|.++||+. ..++.|.++.+...+ .+++++
T Consensus 9 NvTpdsFsdgg~-----~~~~~~a~~~a~~~v~--~GAdiIDIg~g~~--------~v~~~ee~~rvv~~i~~~~~~pis 73 (262)
T 1f6y_A 9 NGMFGDIKRAIQ-----ERDPAPVQEWARRQEE--GGARALDLNVGPA--------VQDKVSAMEWLVEVTQEVSNLTLC 73 (262)
T ss_dssp BTTSHHHHHHHH-----HTCHHHHHHHHHHHHH--HTCSEEEEBCC------------CHHHHHHHHHHHHHTTCCSEEE
T ss_pred cCCchhHHHhhh-----cCCHHHHHHHHHHHHH--CCCcEEEECCCCC--------CCChHHHHHHHHHHHHHhCCCeEE
Confidence 333345667754 2567888888888877 6999999999864 234555554443332 344443
Q ss_pred eeecccccccccCCCcchHHHHHHHHHhc--CCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeecc-CCCCC
Q psy15244 737 MILRGNSLVGYSNYSPAEVGAFCRLASQA--GIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGD-LTNPN 813 (1427)
Q Consensus 737 ml~Rg~n~vgy~~~~~nvv~~~v~~a~~~--Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d-~~~p~ 813 (1427)
.= .+- -+.+++|.++ |.+++.=.... -++++...+.+++.|. -+ +.+.-| -+.|.
T Consensus 74 ID----------T~~----~~v~~aAl~a~~Ga~iINdvs~~--~d~~~~~~~~~a~~~~---~v---vlmh~~~~G~p~ 131 (262)
T 1f6y_A 74 LD----------STN----IKAIEAGLKKCKNRAMINSTNAE--REKVEKLFPLAVEHGA---AL---IGLTMNKTGIPK 131 (262)
T ss_dssp EE----------CSC----HHHHHHHHHHCSSCEEEEEECSC--HHHHHHHHHHHHHTTC---EE---EEESCCSSCSCS
T ss_pred Ee----------CCC----HHHHHHHHhhCCCCCEEEECCCC--cccHHHHHHHHHHhCC---cE---EEEcCCCCCCCC
Confidence 32 122 2346677777 99888643333 2666677888888887 22 222210 12232
Q ss_pred CCCCCHHHHHHHHHHHHHCCCC--EEEEcccc-C-cC-CHH---HHHHHHHHHHHHc-CCceEEEeecCCc-ch------
Q psy15244 814 KKKYSLNYYEDLAKQLVESGAQ--VLCLKDMA-G-LL-KPT---AAKLLIGSFREKY-PNILIHVHTHDMA-GT------ 877 (1427)
Q Consensus 814 ~~~~~~~~~~~~a~~l~~~Gad--~i~i~Dt~-G-~l-~P~---~~~~lv~~lr~~~-p~ipi~~H~Hnd~-Gl------ 877 (1427)
.-.-..+++.+.++.+.++|+. .|.| |.. | .. ... +.-+.++.+++.+ |+.|+-+=.+|-+ |+
T Consensus 132 t~~~~~~~~~~~~~~a~~~Gi~~~~Iil-DPg~g~~g~~~~~~~~~l~~l~~l~~~~~pg~pvl~G~Srksfg~~~~~~l 210 (262)
T 1f6y_A 132 DSDTRLAFAMELVAAADEFGLPMEDLYI-DPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQNCQNRPLI 210 (262)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCGGGEEE-ECCCCCTTTCTTHHHHHHHHHHHHHTCCSSCCEEEEEGGGGGTTCSSHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCcccEEE-eCCCCcCCCChHHHHHHHHHHHHHHHHhCCCCCEEEeecCCcCCCCHHHHH
Confidence 1112357778888889999986 4443 432 2 11 123 4444456666556 7889877655543 32
Q ss_pred HHHHHHHHHHhcCCE
Q psy15244 878 GVATTLACVKAGADI 892 (1427)
Q Consensus 878 A~An~laAi~AGad~ 892 (1427)
.-.-+..|+.+|++.
T Consensus 211 ~~t~~~~a~~~g~~~ 225 (262)
T 1f6y_A 211 NRTFLAMAMACGLMS 225 (262)
T ss_dssp HHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHhCCe
Confidence 112234555666654
No 247
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=88.05 E-value=7.2 Score=43.60 Aligned_cols=200 Identities=10% Similarity=0.031 Sum_probs=114.3
Q ss_pred CHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceee-eecccccccccCCCcchHHH
Q psy15244 679 RTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQM-ILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 679 ~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qm-l~Rg~n~vgy~~~~~nvv~~ 757 (1427)
+.+|+.+++....+ .|+.++=+-.| | ++... ..++.+-+ +..+.+..|. .+.+..-.
T Consensus 39 ~~~di~~~~~~a~~--~~~~av~v~~~--------------~--v~~~~--~~~~~liv~~~~~~~~~g~--~~~~~~~~ 96 (263)
T 1w8s_A 39 DSADPEYILRLARD--AGFDGVVFQRG--------------I--AEKYY--DGSVPLILKLNGKTTLYNG--EPVSVANC 96 (263)
T ss_dssp GGGCHHHHHHHHHH--HTCSEEEECHH--------------H--HHHHC--CSSSCEEEECEECCTTCCS--SCCCEESS
T ss_pred chhhHHHHHHHHHh--hCCCEEEECHH--------------H--HHHhh--cCCCcEEEEEeCCCCcCCC--CccchHHH
Confidence 56778888887777 58888865311 1 22222 44454322 3333333333 23334444
Q ss_pred HHHHHHhcCCCEEEEec--cCCh----HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15244 758 FCRLASQAGIDIFRVFD--PLNS----VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVE 831 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~--~~nd----~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~ 831 (1427)
.++.|++.|++.+-+-. .-.+ ++.+....+.+++.|. .+-. .||... .......+.+.....++.+.+
T Consensus 97 ~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~---~vIi-~~~~~G--~~~~~~~s~~~i~~a~~~a~~ 170 (263)
T 1w8s_A 97 SVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDL---PLVV-ESFPRG--GKVVNETAPEIVAYAARIALE 170 (263)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTC---CEEE-EECCCS--TTCCCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCC---eEEE-EeeCCC--CccccCCCHHHHHHHHHHHHH
Confidence 58899999999887665 3222 2345566666777777 3322 255420 000112377888888899999
Q ss_pred CCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEee---cCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCc
Q psy15244 832 SGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHT---HDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPA 908 (1427)
Q Consensus 832 ~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~---Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~ 908 (1427)
+|||.|... +.| .|+. ++.+++..+.+||-.=. .+|.--+++|.-.++++||+.+-+..+=+ ..++
T Consensus 171 ~GAD~vkt~-~~~--~~e~----~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~----~~~d 239 (263)
T 1w8s_A 171 LGADAMKIK-YTG--DPKT----FSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVW----QRRD 239 (263)
T ss_dssp HTCSEEEEE-CCS--SHHH----HHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHH----TSTT
T ss_pred cCCCEEEEc-CCC--CHHH----HHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhc----CCcC
Confidence 999998887 433 4444 44455555333653322 22667888899999999998554333222 2234
Q ss_pred HHHHHHHHH
Q psy15244 909 MGTIVSCLE 917 (1427)
Q Consensus 909 lE~vv~~L~ 917 (1427)
.+..+..|.
T Consensus 240 p~~~~~~l~ 248 (263)
T 1w8s_A 240 ALKFARALA 248 (263)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 445554444
No 248
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=88.02 E-value=1.8 Score=50.64 Aligned_cols=71 Identities=21% Similarity=0.244 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEE-eecCCcchHHHHHHHHHHhcCCEEEecc
Q psy15244 820 NYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHV-HTHDMAGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 820 ~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~-H~Hnd~GlA~An~laAi~AGad~VD~av 897 (1427)
+...+.++.+.++|+|.|.| |++. ..+..+.+.|+.+|+.+|+++|.. -. .....+..++++|||.|.+++
T Consensus 99 ~~~~e~~~~a~~aGvdvI~i-d~a~-G~~~~~~e~I~~ir~~~~~~~Vi~G~V-----~T~e~A~~a~~aGaD~I~Vg~ 170 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCV-DVAH-AHAKYVGKTLKSLRQLLGSRCIMAGNV-----ATYAGADYLASCGADIIKAGI 170 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-ECSC-CSSHHHHHHHHHHHHHHTTCEEEEEEE-----CSHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEE-eCCC-CCcHhHHHHHHHHHHhcCCCeEEEcCc-----CCHHHHHHHHHcCCCEEEEcC
Confidence 45678899999999997776 5432 235567788999999988888876 22 235667899999999999853
No 249
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=87.99 E-value=0.38 Score=51.01 Aligned_cols=48 Identities=27% Similarity=0.391 Sum_probs=37.3
Q ss_pred EEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEE-----------------------------ecCCCeeCCCC
Q psy15244 1370 EVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIF-----------------------------VEVGGQVAQND 1420 (1427)
Q Consensus 1370 ~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~-----------------------------v~~G~~V~~g~ 1420 (1427)
.++|++|+.|++||.|+.=. +|.|..+|+|.+.. |+.|+.|.+||
T Consensus 22 ~L~V~dG~~VkkG~~laeWD------PIitE~~G~V~d~k~lP~I~I~d~~G~~~~~Y~LPvgA~l~~~V~dG~~V~~Gd 95 (193)
T 2xha_A 22 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVDVKNVRKIVVETIDRKYTKTYYIPESAGIEPGLRVGTKVKQGL 95 (193)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEEEEEEEEEEEECTTSSCEEEEEEEGGGCCCTTCCTTCEECTTS
T ss_pred EEEECCCCEEcCCCEEEEeC------cEEEccCEEEEeeccCcEEEEEcCCCCEeEEEEcCCCCEEEEEcCCCCEEcCCC
Confidence 46899999999999999755 78888888875433 66788888887
Q ss_pred EEE
Q psy15244 1421 LVV 1423 (1427)
Q Consensus 1421 ~L~ 1423 (1427)
+|+
T Consensus 96 vLA 98 (193)
T 2xha_A 96 PLS 98 (193)
T ss_dssp BSS
T ss_pred EEe
Confidence 763
No 250
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=87.96 E-value=3.9 Score=45.81 Aligned_cols=188 Identities=13% Similarity=0.120 Sum_probs=95.3
Q ss_pred EEEEEEEeeccCCCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEccc------cCcCCHHHHHHHHHHHHHHc-CCceEEE
Q psy15244 798 IVEATICYAGDLTNPNKKKY-SLNYYEDLAKQLVESGAQVLCLKDM------AGLLKPTAAKLLIGSFREKY-PNILIHV 869 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~-~~~~~~~~a~~l~~~Gad~i~i~Dt------~G~l~P~~~~~lv~~lr~~~-p~ipi~~ 869 (1427)
.+.+-+..|-|=++ |.++| +.+..++-++++.+.|||+|-|.=- .-+-.-++..+++..++.-. ++++|.+
T Consensus 8 ~iMGIlNvTPDSFs-DGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSI 86 (270)
T 4hb7_A 8 KIMGILNVTPDSFS-DGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISV 86 (270)
T ss_dssp EEEEEEECC-----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEE
T ss_pred eEEEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEE
Confidence 56666776654222 34555 6788999999999999999987311 01111244555544444321 4899998
Q ss_pred eecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHh------CCCCCCCC-h--hhHHHHHHHHHHH
Q psy15244 870 HTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLEN------TDKRCGID-L--HDVCDYSSYWRKV 940 (1427)
Q Consensus 870 H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~------~g~~tgid-l--~~L~~l~~~v~~~ 940 (1427)
-|-+ ...+-+|+++||++|+=-. ++...|.+-.+++...- +...+.++ . +-...+.+.++..
T Consensus 87 DT~~-----~~Va~~al~aGa~iINDVs----~g~~d~~m~~~va~~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a 157 (270)
T 4hb7_A 87 DTFR-----SEVAEACLKLGVDMINDQW----AGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQA 157 (270)
T ss_dssp ECSC-----HHHHHHHHHHTCCEEEETT----TTSSCTHHHHHHHHTTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHH
T ss_pred ECCC-----HHHHHHHHHhccceecccc----ccccchhHHHHHHHcCCCeEEeccccCCccccchhHHHHHHHHHHHHH
Confidence 6644 3455799999999987533 33445777777765531 11112111 1 1222233333344
Q ss_pred hCCCCCCCCcccccchhhhhHHHHHHHHHHhhhhcCCCCCCCCCcCcccEEEecC
Q psy15244 941 RELYAPAHNLLWRCGIDLHDVCDYSSYWRKVRELYAPFECTDLKAASSEAYLYEI 995 (1427)
Q Consensus 941 ~g~~~~~~kpivG~~~f~~~~~~~~~~~~~~~~~Y~~f~~~~~~g~~~~v~~~~~ 995 (1427)
...-++.++=++--++==.+...|+-.+.+.-..+..|.+|-+.|.++.-+++++
T Consensus 158 ~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~~~~~lg~PvLvG~SRKsfig~~ 212 (270)
T 4hb7_A 158 KIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEM 212 (270)
T ss_dssp HHTTCCGGGEEEECCTTSSCCHHHHHHHHTCHHHHHTTCSCBEECCTTSHHHHHH
T ss_pred HHcCCCCceEEEeCCCCcccccccHHHHHhhHHHHhcCCCCEEEEecHHHHHHHH
Confidence 3334444442221111001233444444444445555655666666655544443
No 251
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=87.85 E-value=9.1 Score=44.04 Aligned_cols=130 Identities=8% Similarity=0.084 Sum_probs=84.6
Q ss_pred cccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchH
Q psy15244 676 TRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEV 755 (1427)
Q Consensus 676 ~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv 755 (1427)
..++.+++.++++.+.+ .|+..|-+.||-- +++.+-.+-++.+++......+.+...|. ..
T Consensus 48 ~~ls~e~i~~~i~~~~~--~g~~~i~~tGGEP------ll~~~l~~li~~~~~~~~~~~i~i~TNG~-----------ll 108 (340)
T 1tv8_A 48 ELLTFDEMARIAKVYAE--LGVKKIRITGGEP------LMRRDLDVLIAKLNQIDGIEDIGLTTNGL-----------LL 108 (340)
T ss_dssp GSCCHHHHHHHHHHHHH--TTCCEEEEESSCG------GGSTTHHHHHHHHTTCTTCCEEEEEECST-----------TH
T ss_pred CCCCHHHHHHHHHHHHH--CCCCEEEEeCCCc------cchhhHHHHHHHHHhCCCCCeEEEEeCcc-----------ch
Confidence 45889999999999987 7999998888753 34444344445554432212455544442 12
Q ss_pred HHHHHHHHhcCCCEEEEecc-CC------------hHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHH
Q psy15244 756 GAFCRLASQAGIDIFRVFDP-LN------------SVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYY 822 (1427)
Q Consensus 756 ~~~v~~a~~~Gid~~rif~~-~n------------d~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~ 822 (1427)
.+.++...++|++.+.|..- ++ .++.....++.++++|. .+.....+. + ..+.+.+
T Consensus 109 ~~~~~~L~~~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~---~v~i~~vv~-----~---g~n~~ei 177 (340)
T 1tv8_A 109 KKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL---NVKVNVVIQ-----K---GINDDQI 177 (340)
T ss_dssp HHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTC---EEEEEEEEC-----T---TTTGGGH
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCC---CEEEEEEEe-----C---CCCHHHH
Confidence 33577777899998887543 33 24566678888888887 444433322 2 2356678
Q ss_pred HHHHHHHHHCCCC
Q psy15244 823 EDLAKQLVESGAQ 835 (1427)
Q Consensus 823 ~~~a~~l~~~Gad 835 (1427)
.++++.+.+.|++
T Consensus 178 ~~~~~~~~~~g~~ 190 (340)
T 1tv8_A 178 IPMLEYFKDKHIE 190 (340)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCe
Confidence 8888888999987
No 252
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=87.75 E-value=2.9 Score=42.27 Aligned_cols=101 Identities=15% Similarity=0.067 Sum_probs=65.9
Q ss_pred CCEEEEEcC----CHHHHHHHHHHHHcCCEEEEEecCCCccC---cccc------ccceEEEcCCCCCcccCCCCHHHHH
Q psy15244 57 MEKILIANR----SEVAIRVARACNEMGIKSVGIYSEQDKFS---AHRT------KVDQAFLVGKGMPPVAAYLNIPEII 123 (1427)
Q Consensus 57 ~kkVLIagr----Geia~riiraa~elGi~~vav~s~~d~~s---~~~~------~aDe~~~i~~~~~~~~~yldi~~Ii 123 (1427)
.++|.|+|. |-.+.++++.+++.|++++.+....+... .+.. -.|-++..- +. .....++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~v----p~---~~~~~vv 94 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFV----KP---KLTMEYV 94 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECS----CH---HHHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEe----CH---HHHHHHH
Confidence 458999997 57889999999999999777754432110 0000 123222211 10 1245666
Q ss_pred HHHHhcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHH
Q psy15244 124 CIAKNNNVDAIHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVL 166 (1427)
Q Consensus 124 ~ia~~~~vDaI~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai 166 (1427)
+-|.+.++.+|+-..|+. ..++++.+++.|+.++||.---+
T Consensus 95 ~~~~~~gi~~i~~~~g~~--~~~l~~~a~~~Gi~vvGpnc~gv 135 (144)
T 2d59_A 95 EQAIKKGAKVVWFQYNTY--NREASKKADEAGLIIVANRCMMR 135 (144)
T ss_dssp HHHHHHTCSEEEECTTCC--CHHHHHHHHHTTCEEEESCCHHH
T ss_pred HHHHHcCCCEEEECCCch--HHHHHHHHHHcCCEEEcCCchhh
Confidence 667778888888776653 56789999999999999865433
No 253
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=87.74 E-value=1.5 Score=47.28 Aligned_cols=155 Identities=13% Similarity=0.041 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHH
Q psy15244 680 TYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFC 759 (1427)
Q Consensus 680 t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v 759 (1427)
.++.+++++.+.+ .|+..||+. +-..+..+.++.+++ ++.. .|.+. .-+ ...+
T Consensus 24 ~~~~~~~~~~l~~--gGv~~iel~----------~k~~~~~~~i~~~~~--~~~~-----~gag~-----vl~---~d~~ 76 (207)
T 2yw3_A 24 GEDLLGLARVLEE--EGVGALEIT----------LRTEKGLEALKALRK--SGLL-----LGAGT-----VRS---PKEA 76 (207)
T ss_dssp CCCHHHHHHHHHH--TTCCEEEEE----------CSSTHHHHHHHHHTT--SSCE-----EEEES-----CCS---HHHH
T ss_pred HHHHHHHHHHHHH--cCCCEEEEe----------CCChHHHHHHHHHhC--CCCE-----EEeCe-----Eee---HHHH
Confidence 3557788888887 799999985 223344455666666 4332 22221 112 2458
Q ss_pred HHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q psy15244 760 RLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCL 839 (1427)
Q Consensus 760 ~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i 839 (1427)
+.|.++|.|.++.- -.|. ..++.++..|. ..-.. .+|++. +.++.++|+|.|.+
T Consensus 77 ~~A~~~GAd~v~~~--~~d~----~v~~~~~~~g~---~~i~G-------------~~t~~e----~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 77 EAALEAGAAFLVSP--GLLE----EVAALAQARGV---PYLPG-------------VLTPTE----VERALALGLSALKF 130 (207)
T ss_dssp HHHHHHTCSEEEES--SCCH----HHHHHHHHHTC---CEEEE-------------ECSHHH----HHHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEcC--CCCH----HHHHHHHHhCC---CEEec-------------CCCHHH----HHHHHHCCCCEEEE
Confidence 99999999998644 2332 45566777777 22111 133333 34556789999988
Q ss_pred ccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEe
Q psy15244 840 KDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 840 ~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~ 895 (1427)
-= ..+..-.+.++.++..+|++|+-. .-|....|+-+-+++|++.|-+
T Consensus 131 fp----a~~~gG~~~lk~l~~~~~~ipvva----iGGI~~~n~~~~l~aGa~~vav 178 (207)
T 2yw3_A 131 FP----AEPFQGVRVLRAYAEVFPEVRFLP----TGGIKEEHLPHYAALPNLLAVG 178 (207)
T ss_dssp TT----TTTTTHHHHHHHHHHHCTTCEEEE----BSSCCGGGHHHHHTCSSBSCEE
T ss_pred ec----CccccCHHHHHHHHhhCCCCcEEE----eCCCCHHHHHHHHhCCCcEEEE
Confidence 21 111102367889998888888753 2355567888899999987644
No 254
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=87.71 E-value=2.1 Score=46.51 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=49.0
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHHHcC-CEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCC
Q psy15244 55 KTMEKILIAN-RSEVAIRVARACNEMG-IKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVD 132 (1427)
Q Consensus 55 ~~~kkVLIag-rGeia~riiraa~elG-i~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vD 132 (1427)
.+|++|||.| .|.++..+++.+.+.| ++++++..+++..... .......+ ..+..|.+.+.++.+ ++|
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--~~~~~~~~------~~Dl~d~~~~~~~~~--~~D 90 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--YPTNSQII------MGDVLNHAALKQAMQ--GQD 90 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--CCTTEEEE------ECCTTCHHHHHHHHT--TCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--ccCCcEEE------EecCCCHHHHHHHhc--CCC
Confidence 4578999999 7999999999999999 8888776554432111 11111111 123456777777766 589
Q ss_pred EEEeCCC
Q psy15244 133 AIHPGYG 139 (1427)
Q Consensus 133 aI~pg~g 139 (1427)
.|+-..+
T Consensus 91 ~vv~~a~ 97 (236)
T 3qvo_A 91 IVYANLT 97 (236)
T ss_dssp EEEEECC
T ss_pred EEEEcCC
Confidence 8885544
No 255
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=87.69 E-value=8.3 Score=44.66 Aligned_cols=135 Identities=20% Similarity=0.212 Sum_probs=85.5
Q ss_pred HHHHHH---HHHhcCCCEEEEeccC------------C------------hHHHHHHHHHHHHHh-cCCCcEEEEEEEee
Q psy15244 755 VGAFCR---LASQAGIDIFRVFDPL------------N------------SVPNLVKGMDAVQQV-TGGSTIVEATICYA 806 (1427)
Q Consensus 755 v~~~v~---~a~~~Gid~~rif~~~------------n------------d~~~~~~~i~~a~~~-G~~~~~v~~~i~~t 806 (1427)
++.|++ +|.++|.|.|.|-.+. | ..+-+.+.+++++++ .. .+.+-|+-.
T Consensus 143 i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~---pv~vris~~ 219 (338)
T 1z41_A 143 VQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDG---PLFVRVSAS 219 (338)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCS---CEEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCC---cEEEEecCc
Confidence 445544 4567899999887643 1 123456677777765 33 333333322
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccC--c---CCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHH
Q psy15244 807 GDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAG--L---LKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVAT 881 (1427)
Q Consensus 807 ~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G--~---l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An 881 (1427)
|+. ....+.+...++++.++++|+|.|.+.+..- . ..|..-.++++.+|+.+ ++||-.-.--+ ....
T Consensus 220 -~~~---~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~---s~~~ 291 (338)
T 1z41_A 220 -DYT---DKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA-DMATGAVGMIT---DGSM 291 (338)
T ss_dssp -CCS---TTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-CCEEEECSSCC---SHHH
T ss_pred -ccC---CCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC-CCCEEEECCCC---CHHH
Confidence 111 1257888999999999999999999876321 1 12222356788899988 88876533221 2567
Q ss_pred HHHHHHhc-CCEEEeccccC
Q psy15244 882 TLACVKAG-ADIVDVAADSM 900 (1427)
Q Consensus 882 ~laAi~AG-ad~VD~av~Gm 900 (1427)
+.+++++| ||.|-..-.-+
T Consensus 292 a~~~l~~G~aD~V~iGR~~i 311 (338)
T 1z41_A 292 AEEILQNGRADLIFIGRELL 311 (338)
T ss_dssp HHHHHHTTSCSEEEECHHHH
T ss_pred HHHHHHcCCceEEeecHHHH
Confidence 78889999 99986554333
No 256
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=87.68 E-value=5.1 Score=45.55 Aligned_cols=205 Identities=20% Similarity=0.265 Sum_probs=112.6
Q ss_pred eEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCC--CCcee
Q psy15244 659 ILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIP--NIPFQ 736 (1427)
Q Consensus 659 v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p--~~~~q 736 (1427)
+.+|--+|=||.+. ++.+..++.|..+-+ .|.+.|+++|-+|-..+-.--.+..|+|+..+-+.+. +++++
T Consensus 29 lNvTPDSFsdgg~~-----~~~~~a~~~a~~~v~--~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiS 101 (294)
T 2y5s_A 29 LNATPDSFSDGGRF-----LARDDALRRAERMIA--EGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLS 101 (294)
T ss_dssp EECCC---------------CTTHHHHHHHHHHH--TTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEE
T ss_pred EeCCCCCCCCCCCc-----CCHHHHHHHHHHHHH--CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEE
Confidence 34454557888763 456888888888877 7999999998544221111112344666543333332 45544
Q ss_pred eeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCC--
Q psy15244 737 MILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNK-- 814 (1427)
Q Consensus 737 ml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~-- 814 (1427)
.= .+- -+.+++|.++|.++|.=....+ .+ ...+.+++.|. -+. .+.+.| .|..
T Consensus 102 ID----------T~~----~~Va~aAl~aGa~iINdVsg~~-d~---~m~~~~a~~~~---~vV-lmh~~G---~p~tm~ 156 (294)
T 2y5s_A 102 ID----------TYK----PAVMRAALAAGADLINDIWGFR-QP---GAIDAVRDGNS---GLC-AMHMLG---EPQTMQ 156 (294)
T ss_dssp EE----------CCC----HHHHHHHHHHTCSEEEETTTTC-ST---THHHHHSSSSC---EEE-EECCCE---ETTTTE
T ss_pred EE----------CCC----HHHHHHHHHcCCCEEEECCCCC-ch---HHHHHHHHhCC---CEE-EECCCC---CCcccc
Confidence 31 122 3346778888999987666655 22 34556677776 221 122221 2321
Q ss_pred ---CCCC------HHHHHHHHHHHHHCCCC--EEEEccc-cCcC-CH-HHHHHHHHHHHHH------cCCceEEEeecC-
Q psy15244 815 ---KKYS------LNYYEDLAKQLVESGAQ--VLCLKDM-AGLL-KP-TAAKLLIGSFREK------YPNILIHVHTHD- 873 (1427)
Q Consensus 815 ---~~~~------~~~~~~~a~~l~~~Gad--~i~i~Dt-~G~l-~P-~~~~~lv~~lr~~------~p~ipi~~H~Hn- 873 (1427)
..|+ .+++.+.++.+.++|+. .|.| |. .|.. +. ++-.++++.+++- .++.|+-+=.-|
T Consensus 157 ~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DPG~Gf~kt~~~~n~~ll~~l~~l~~~~~~~~g~Pvl~G~Srk 235 (294)
T 2y5s_A 157 VGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICV-DPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRK 235 (294)
T ss_dssp ECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSSCTTHHHHHHHHTGGGGSCBCTTSSBCCBEEECTTC
T ss_pred ccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEE-eCCCcccccchHHHHHHHHHHHHHHhccccCCCCCEEEEeccc
Confidence 1233 78888999999999987 4444 43 1222 34 5667777777642 346776543322
Q ss_pred ---------Cc-----chHHHHHHHHHHhcCCEEEec
Q psy15244 874 ---------MA-----GTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 874 ---------d~-----GlA~An~laAi~AGad~VD~a 896 (1427)
+. +.-.|.+..|+++||++|.+.
T Consensus 236 sfig~l~g~~~~~~R~~~t~a~~~~a~~~Ga~IvrvH 272 (294)
T 2y5s_A 236 SMLGAVIGGKPPLERVAASVAAALCAVERGAAIVRVH 272 (294)
T ss_dssp HHHHTTTTSCCGGGCHHHHHHHHHHHHHTTCSEEEES
T ss_pred HHhhhhcCCCchhhhhHHHHHHHHHHHHcCCcEEEcC
Confidence 11 234556668889999998775
No 257
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.62 E-value=2.7 Score=47.94 Aligned_cols=126 Identities=13% Similarity=0.091 Sum_probs=83.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEc-cccCcCCHHHHHHHHHHHH---HHcCCceEEEeecCCcchHHHHHHHHHH--hcC
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLK-DMAGLLKPTAAKLLIGSFR---EKYPNILIHVHTHDMAGTGVATTLACVK--AGA 890 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~-Dt~G~l~P~~~~~lv~~lr---~~~p~ipi~~H~Hnd~GlA~An~laAi~--AGa 890 (1427)
.+.+..++.+++.++.|||+|-|. +...+-.++++.+++..++ +.. ++||.+-+-+ ...+-+|++ +|+
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~-~vpisIDT~~-----~~V~eaaL~~~~Ga 107 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIA-RVPVMIDSSK-----WEVIEAGLKCLQGK 107 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHH-TSCEEEECSC-----HHHHHHHHHHCSSC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcC-CCeEEEeCCC-----HHHHHHHHHhcCCC
Confidence 578999999999999999998886 4444445577888888887 444 8999997754 455678888 799
Q ss_pred CEEEeccccCCCCCCCCcHHHHHHHHHhCCCC----------CCCChhhHHHHHHHHHHH--hCCCCCCCCccc
Q psy15244 891 DIVDVAADSMSGICSQPAMGTIVSCLENTDKR----------CGIDLHDVCDYSSYWRKV--RELYAPAHNLLW 952 (1427)
Q Consensus 891 d~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~----------tgidl~~L~~l~~~v~~~--~g~~~~~~kpiv 952 (1427)
++|+--. +..+.+.++.++...+.+|.. ..-+.+.-.++++.+.+. ...-+++++-++
T Consensus 108 ~iINdIs----~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~Iil 177 (300)
T 3k13_A 108 SIVNSIS----LKEGEEVFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIF 177 (300)
T ss_dssp CEEEEEC----STTCHHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEE
T ss_pred CEEEeCC----cccCChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEE
Confidence 9986543 334456556666666554321 112355556666666555 344555665433
No 258
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=87.21 E-value=5.3 Score=44.52 Aligned_cols=150 Identities=16% Similarity=0.067 Sum_probs=97.0
Q ss_pred cchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15244 752 PAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVE 831 (1427)
Q Consensus 752 ~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~ 831 (1427)
...+++.+++|.+.|+..+-| ..+++....+ ..+..+. .+...+ +.|.. ..+.+--+.-++++.+
T Consensus 58 ~~~I~~lc~eA~~~~~aaVCV--~p~~V~~a~~---~L~gs~v---~v~tVi------gFP~G-~~~~~~Kv~Ea~~Ai~ 122 (260)
T 3r12_A 58 PDDIKKLCLEARENRFHGVCV--NPCYVKLARE---ELEGTDV---KVVTVV------GFPLG-ANETRTKAHEAIFAVE 122 (260)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE--CGGGHHHHHH---HHTTSCC---EEEEEE------STTTC-CSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHH---HhcCCCC---eEEEEe------cCCCC-CCcHHHHHHHHHHHHH
Confidence 344777899999999988766 4455554433 3332333 332222 34533 4566666777888889
Q ss_pred CCCCEEEEccccCcC---CHHHHHHHHHHHHHHcCCceE----EEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCC
Q psy15244 832 SGAQVLCLKDMAGLL---KPTAAKLLIGSFREKYPNILI----HVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGIC 904 (1427)
Q Consensus 832 ~Gad~i~i~Dt~G~l---~P~~~~~lv~~lr~~~p~ipi----~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~t 904 (1427)
.|||.|-+.=-.|.+ .-..+.+-+.++++..++.++ +....++--. ...+..|.++|||+|-|+ .|++ +
T Consensus 123 ~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei-~~A~~ia~eaGADfVKTS-TGf~--~ 198 (260)
T 3r12_A 123 SGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEK-IAACVISKLAGAHFVKTS-TGFG--T 198 (260)
T ss_dssp HTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHH-HHHHHHHHHTTCSEEECC-CSSS--S
T ss_pred cCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHH-HHHHHHHHHhCcCEEEcC-CCCC--C
Confidence 999998876566664 446788888899888654442 2233333333 344567889999999999 5554 5
Q ss_pred CCCcHHHHHHHHHhCC
Q psy15244 905 SQPAMGTIVSCLENTD 920 (1427)
Q Consensus 905 gn~~lE~vv~~L~~~g 920 (1427)
+.+.+|++-.+.+..|
T Consensus 199 ~GAT~edV~lm~~~vg 214 (260)
T 3r12_A 199 GGATAEDVHLMKWIVG 214 (260)
T ss_dssp CCCCHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHhC
Confidence 6788888776666444
No 259
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=87.17 E-value=0.4 Score=53.30 Aligned_cols=158 Identities=11% Similarity=0.093 Sum_probs=94.5
Q ss_pred HHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEE
Q psy15244 721 ERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVE 800 (1427)
Q Consensus 721 erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~ 800 (1427)
+-++.||+..|+.++-.-+--. .| ..+++.++++|.|.+.+-.-.. +.+.+.++.+|+.|. .+.
T Consensus 75 ~~v~~lr~~~p~~~ldvHLmv~-------~p----~~~i~~~~~aGAd~itvH~Ea~--~~~~~~i~~ir~~G~---k~G 138 (246)
T 3inp_A 75 MVLKALRDYGITAGMDVHLMVK-------PV----DALIESFAKAGATSIVFHPEAS--EHIDRSLQLIKSFGI---QAG 138 (246)
T ss_dssp HHHHHHHHHTCCSCEEEEEECS-------SC----HHHHHHHHHHTCSEEEECGGGC--SCHHHHHHHHHTTTS---EEE
T ss_pred HHHHHHHHhCCCCeEEEEEeeC-------CH----HHHHHHHHHcCCCEEEEccccc--hhHHHHHHHHHHcCC---eEE
Confidence 5678889988888876644311 22 4478888899999988875443 357788899999998 665
Q ss_pred EEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE----ccccCcCCHHHHHHHHHHHHHHc----CCceEEEeec
Q psy15244 801 ATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCL----KDMAGLLKPTAAKLLIGSFREKY----PNILIHVHTH 872 (1427)
Q Consensus 801 ~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i----~Dt~G~l~P~~~~~lv~~lr~~~----p~ipi~~H~H 872 (1427)
.++ +|. ++.+.+..+. + ++|.|.+ ....|...-....+-|+.+|+.. ++++|.+
T Consensus 139 val-------np~---Tp~e~l~~~l----~-~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~V--- 200 (246)
T 3inp_A 139 LAL-------NPA---TGIDCLKYVE----S-NIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEI--- 200 (246)
T ss_dssp EEE-------CTT---CCSGGGTTTG----G-GCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEE---
T ss_pred EEe-------cCC---CCHHHHHHHH----h-cCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEE---
Confidence 543 342 2333332222 2 4676654 23334322123344466666543 3577776
Q ss_pred CCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 873 DMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 873 nd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
|-|....|.-.+++||||++=+. +.-.+.++.++.+..|+
T Consensus 201 -DGGI~~~ti~~~~~aGAD~~V~G----SaIf~a~dp~~~i~~l~ 240 (246)
T 3inp_A 201 -DGGVNPYNIAEIAVCGVNAFVAG----SAIFNSDSYKQTIDKMR 240 (246)
T ss_dssp -ESSCCTTTHHHHHTTTCCEEEES----HHHHTSSCHHHHHHHHH
T ss_pred -ECCcCHHHHHHHHHcCCCEEEEe----hHHhCCCCHHHHHHHHH
Confidence 45666778889999999987332 12234445555555544
No 260
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=87.04 E-value=5.8 Score=43.46 Aligned_cols=126 Identities=21% Similarity=0.344 Sum_probs=80.1
Q ss_pred CcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCC-CCCCCCCHHHHHHHHHHH
Q psy15244 751 SPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTN-PNKKKYSLNYYEDLAKQL 829 (1427)
Q Consensus 751 ~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~-p~~~~~~~~~~~~~a~~l 829 (1427)
.+..+.+..+.+.+.|...+++ +..+. ++.+|+.-.- -+ ..++- .|+.+ +. ..++ +.+-++++
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~----~~~~~----i~~ir~~v~~--Pv-ig~~k-~~~~~~~~--~I~~--~~~~i~~~ 97 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRI----EGIEN----LRTVRPHLSV--PI-IGIIK-RDLTGSPV--RITP--YLQDVDAL 97 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE----ESHHH----HHHHGGGCCS--CE-EEECB-CCCSSCCC--CBSC--SHHHHHHH
T ss_pred CcchHHHHHHHHHHCCCcEEEE----CCHHH----HHHHHHhcCC--CE-EEEEe-ecCCCCce--EeCc--cHHHHHHH
Confidence 3556777788888899999987 23333 3334433210 11 11111 11111 00 0111 23346678
Q ss_pred HHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccC
Q psy15244 830 VESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSM 900 (1427)
Q Consensus 830 ~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~Gm 900 (1427)
.++|||.|.+ |++....|....++++.+++. ++.+..-+|+ ...+..|.++|+|+|=+++.|+
T Consensus 98 ~~aGad~I~l-~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~ 160 (229)
T 3q58_A 98 AQAGADIIAF-DASFRSRPVDIDSLLTRIRLH--GLLAMADCST-----VNEGISCHQKGIEFIGTTLSGY 160 (229)
T ss_dssp HHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--TCEEEEECSS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHcCCCEEEE-CccccCChHHHHHHHHHHHHC--CCEEEEecCC-----HHHHHHHHhCCCCEEEecCccC
Confidence 8899998855 787778898899999999864 6787777775 5667889999999996666665
No 261
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=86.91 E-value=5.1 Score=43.20 Aligned_cols=126 Identities=17% Similarity=0.168 Sum_probs=75.3
Q ss_pred chHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCC-CCCCCCCHHHHHHHHHHHH
Q psy15244 753 AEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTN-PNKKKYSLNYYEDLAKQLV 830 (1427)
Q Consensus 753 nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~-p~~~~~~~~~~~~~a~~l~ 830 (1427)
....+.++++.+.|.+.+++- ..+. ++.+++. +. -+.. +.-. |+.+ .-.-.-+. +.++.+.
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~~----~~~~----i~~i~~~~~~---pv~~-~~~~-~~~~~~~~i~~~~----~~i~~~~ 85 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRAN----TKED----ILAIKETVDL---PVIG-IVKR-DYDHSDVFITATS----KEVDELI 85 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEEE----SHHH----HHHHHHHCCS---CEEE-ECBC-CCTTCCCCBSCSH----HHHHHHH
T ss_pred ccHHHHHHHHHHCCCeeeccC----CHHH----HHHHHHhcCC---CEEe-eecc-CCCccccccCCcH----HHHHHHH
Confidence 445667788888999999873 2222 3434433 33 2211 1111 1100 00000122 3345667
Q ss_pred HCCCCEEEEccccCcCCH-HHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCC
Q psy15244 831 ESGAQVLCLKDMAGLLKP-TAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMS 901 (1427)
Q Consensus 831 ~~Gad~i~i~Dt~G~l~P-~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG 901 (1427)
++|+|.+.+- +.-...| ....++++.+|+.+|+.++..-+|+ ...+..+.++|+|.|-++..|..
T Consensus 86 ~~Gad~v~l~-~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t-----~~e~~~~~~~G~d~i~~~~~g~t 151 (223)
T 1y0e_A 86 ESQCEVIALD-ATLQQRPKETLDELVSYIRTHAPNVEIMADIAT-----VEEAKNAARLGFDYIGTTLHGYT 151 (223)
T ss_dssp HHTCSEEEEE-CSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSS-----HHHHHHHHHTTCSEEECTTTTSS
T ss_pred hCCCCEEEEe-eecccCcccCHHHHHHHHHHhCCCceEEecCCC-----HHHHHHHHHcCCCEEEeCCCcCc
Confidence 8899988773 3333345 4567899999999888888877764 44567789999999976655543
No 262
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=86.84 E-value=6.1 Score=44.88 Aligned_cols=198 Identities=8% Similarity=-0.034 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChH-------HHHHHHHHhCCCCceeeeecccccccc---cCCC
Q psy15244 682 DLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPW-------ERLAELRELIPNIPFQMILRGNSLVGY---SNYS 751 (1427)
Q Consensus 682 d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~-------erl~~lr~~~p~~~~qml~Rg~n~vgy---~~~~ 751 (1427)
....+.+.+.+ .|++.||++.. ..+|| +.++.+++.+....+....-.....+| ....
T Consensus 36 ~~~~~~~~a~~--~G~~~vEl~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~~~~~l~~ 103 (316)
T 3qxb_A 36 PDRLAGLVRDD--LGLEYVQYTYD----------LTDPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTYNHFLA 103 (316)
T ss_dssp HHHHHHHHHHT--SCCCEEEEETT----------TSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTSCBTTC
T ss_pred HHHHHHHHHHH--cCCCEEEeecc----------ccCccccccchhhHHHHHHHHHHHcCCeEEEeeccccccccccCCC
Q ss_pred cc---------hHHHHHHHHHhcCCCEEEEeccC-----------------ChHHHHHHHHHHHHHhcCCCcEEEEE-EE
Q psy15244 752 PA---------EVGAFCRLASQAGIDIFRVFDPL-----------------NSVPNLVKGMDAVQQVTGGSTIVEAT-IC 804 (1427)
Q Consensus 752 ~n---------vv~~~v~~a~~~Gid~~rif~~~-----------------nd~~~~~~~i~~a~~~G~~~~~v~~~-i~ 804 (1427)
++ ..+..++.|.+.|++.+.+.... .-++.+....+.+++.|. . ++
T Consensus 104 ~d~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-------~~l~ 176 (316)
T 3qxb_A 104 PTLELQSLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGL-------SMLY 176 (316)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTC-------CEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCC-------eEEE
Q ss_pred eeccCC--CCCCCCCCHHHHHHHHHHHHHCCCCEEEEc-cccCcCC------HHHHHHHHHHHHHHcCCceEEEeecCCc
Q psy15244 805 YAGDLT--NPNKKKYSLNYYEDLAKQLVESGAQVLCLK-DMAGLLK------PTAAKLLIGSFREKYPNILIHVHTHDMA 875 (1427)
Q Consensus 805 ~t~d~~--~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~-Dt~G~l~------P~~~~~lv~~lr~~~p~ipi~~H~Hnd~ 875 (1427)
+- . -......+.+.+.++++.+.+.+.+.+.++ |+.=... -....+.++.+...+ .++|.+|..
T Consensus 177 lE---~~~~~~~~~~t~~~~~~l~~~v~~~~~~~vg~~lD~~H~~~~~~~~~~~d~~~~l~~~~~~i----~~vHlkD~~ 249 (316)
T 3qxb_A 177 VE---PVPLATEFPSSAADAARLMADLDGRTEIPVRLLVDWGHALFEPLFGPEADMDHWMDLCQPWI----AAYHIQQTD 249 (316)
T ss_dssp EC---CCSCTTBSSCSHHHHHHHHHHHTTTSSSCEEEEEEHHHHTCHHHHGGGCSHHHHHHHHGGGE----EEEEECBCC
T ss_pred EE---ecCCccccCCCHHHHHHHHHHHhccCCCCEEEEEEccchheecccccccCHHHHHHHHHhhh----eEEeeecCC
Q ss_pred chHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCC
Q psy15244 876 GTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKR 922 (1427)
Q Consensus 876 GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~ 922 (1427)
+. -|.-..-.|. |..+...++..|+..|++
T Consensus 250 ~~---------------~d~h~~~~G~--G~id~~~i~~~L~~~gy~ 279 (316)
T 3qxb_A 250 GQ---------------LDRHWSFTQP--GVVTPQRLQDFWDKYALT 279 (316)
T ss_dssp SS---------------SCCCBCTTSC--SSCCHHHHHHHHHHTTCS
T ss_pred CC---------------cCccCCCCCC--ceECHHHHHHHHHHcCCC
No 263
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=86.77 E-value=1.1 Score=49.39 Aligned_cols=192 Identities=15% Similarity=0.170 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHhhcCCccEEecc--CCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 680 TYDLKKVSPFVANRFNNLYSLEMW--GGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 680 t~d~l~ia~~l~~~~~G~~~iE~~--ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
..+..+.++.+.+ .|++.+++. .|. |--. +...+ +.++.+|+.. +.++...+-..| | +.
T Consensus 16 ~~~l~~~i~~~~~--~Gad~ihldi~DG~-fvp~---~~~g~-~~v~~lr~~~-~~~~~vhlmv~d-------p----~~ 76 (230)
T 1tqj_A 16 FSRLGEEIKAVDE--AGADWIHVDVMDGR-FVPN---ITIGP-LIVDAIRPLT-KKTLDVHLMIVE-------P----EK 76 (230)
T ss_dssp GGGHHHHHHHHHH--TTCSEEEEEEEBSS-SSSC---BCBCH-HHHHHHGGGC-CSEEEEEEESSS-------G----GG
T ss_pred HhHHHHHHHHHHH--cCCCEEEEEEEecC-CCcc---hhhhH-HHHHHHHhhc-CCcEEEEEEccC-------H----HH
Confidence 3445566666666 688887764 111 1001 22223 6777888765 445553332211 2 34
Q ss_pred HHHHHHhcCCCEEEEecc--CChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q psy15244 758 FCRLASQAGIDIFRVFDP--LNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQ 835 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~--~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad 835 (1427)
|++.+.++|.|.+.+-.- ..+ .....++.+++.|. .+-..+ +|. ++.+.+ +.+. .++|
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~~--~~~~~~~~i~~~g~---~~gv~~-------~p~---t~~e~~----~~~~-~~~D 136 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNASP--HLHRTLCQIRELGK---KAGAVL-------NPS---TPLDFL----EYVL-PVCD 136 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTCT--THHHHHHHHHHTTC---EEEEEE-------CTT---CCGGGG----TTTG-GGCS
T ss_pred HHHHHHHcCCCEEEECcccccch--hHHHHHHHHHHcCC---cEEEEE-------eCC---CcHHHH----HHHH-hcCC
Confidence 688999999999988876 543 46677888899998 655443 231 222222 2222 2788
Q ss_pred EEEEcc---cc-CcCCHHHHHHHHHHHHHHcC----CceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCC
Q psy15244 836 VLCLKD---MA-GLLKPTAAKLLIGSFREKYP----NILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQP 907 (1427)
Q Consensus 836 ~i~i~D---t~-G~l~P~~~~~lv~~lr~~~p----~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~ 907 (1427)
.|.+-= +. |.-.+....+.++.+|+..+ ++||.+ +.|....|.-.++++|||.+=+.-. -.+.+
T Consensus 137 ~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v----~GGI~~~~~~~~~~aGad~vvvGSa----i~~a~ 208 (230)
T 1tqj_A 137 LILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEV----DGGLKPNNTWQVLEAGANAIVAGSA----VFNAP 208 (230)
T ss_dssp EEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEE----ESSCCTTTTHHHHHHTCCEEEESHH----HHTSS
T ss_pred EEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEE----ECCcCHHHHHHHHHcCCCEEEECHH----HHCCC
Confidence 664321 11 22223345666777776653 678877 5677778888899999998744321 22345
Q ss_pred cHHHHHHHHHh
Q psy15244 908 AMGTIVSCLEN 918 (1427)
Q Consensus 908 ~lE~vv~~L~~ 918 (1427)
+.++.+..|+.
T Consensus 209 d~~~~~~~l~~ 219 (230)
T 1tqj_A 209 NYAEAIAGVRN 219 (230)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 56666666654
No 264
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=86.65 E-value=2.3 Score=48.32 Aligned_cols=104 Identities=14% Similarity=0.181 Sum_probs=60.1
Q ss_pred EEEEEEEeeccCCCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEccccCcCCH--------HH---HHHHHHHHHHHcCCc
Q psy15244 798 IVEATICYAGDLTNPNKKKY-SLNYYEDLAKQLVESGAQVLCLKDMAGLLKP--------TA---AKLLIGSFREKYPNI 865 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~-~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P--------~~---~~~lv~~lr~~~p~i 865 (1427)
.+.+-+..|-|=+ -|.++| +.+..++.++++.+.|||+|-|.=- ...| ++ +..+|+++++. ++
T Consensus 30 ~iMGIlNvTPDSF-sdgg~~~~~~~a~~~a~~~v~~GAdIIDIGge--STrPga~~v~~~eE~~Rv~pvI~~l~~~--~v 104 (294)
T 2dqw_A 30 RLLGVLNLTPDSF-SDGGRYLDPERALERAREMVAEGADILDLGAE--STRPGAAPVPVEEEKRRLLPVLEAVLSL--GV 104 (294)
T ss_dssp EEEEEEECCC--------------CCHHHHHHHHHHTCSEEEEECC-------------CCHHHHHHHHHHHHHTT--CS
T ss_pred eEEEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC--cCCCCCCCCCHHHHHHHHHHHHHHHHhC--CC
Confidence 5667777775522 244565 7899999999999999999987521 1123 33 44455555543 78
Q ss_pred eEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHH
Q psy15244 866 LIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCL 916 (1427)
Q Consensus 866 pi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L 916 (1427)
||.+-+=+ ...+.+|+++|+++|+-...+ ..+.+-.+++-.
T Consensus 105 piSIDT~~-----~~Va~aAl~aGa~iINdVsg~-----~d~~m~~v~a~~ 145 (294)
T 2dqw_A 105 PVSVDTRK-----PEVAEEALKLGAHLLNDVTGL-----RDERMVALAARH 145 (294)
T ss_dssp CEEEECSC-----HHHHHHHHHHTCSEEECSSCS-----CCHHHHHHHHHH
T ss_pred eEEEECCC-----HHHHHHHHHhCCCEEEECCCC-----CChHHHHHHHHh
Confidence 99886555 456678999999999754322 344554444433
No 265
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=86.65 E-value=15 Score=40.89 Aligned_cols=122 Identities=14% Similarity=-0.008 Sum_probs=78.6
Q ss_pred HHHHHHhcCCCEE--EEeccCChH----HHHHHHHHHHHHhcCCCcEEEEEEEee--ccCCCCCCCCCCHHHHHHHHHHH
Q psy15244 758 FCRLASQAGIDIF--RVFDPLNSV----PNLVKGMDAVQQVTGGSTIVEATICYA--GDLTNPNKKKYSLNYYEDLAKQL 829 (1427)
Q Consensus 758 ~v~~a~~~Gid~~--rif~~~nd~----~~~~~~i~~a~~~G~~~~~v~~~i~~t--~d~~~p~~~~~~~~~~~~~a~~l 829 (1427)
.++.+.+.|++.+ .+.+...+. +.++..++.+++.|. .+... ++. .|+ + ..++.+.+.++++.+
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~---~viv~-~~~~G~~l--~--~~~~~~~~~~~a~~a 175 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGM---PLIAM-MYPRGKHI--Q--NERDPELVAHAARLG 175 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTC---CEEEE-EEECSTTC--S--CTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCC---CEEEE-eCCCCccc--C--CCCCHhHHHHHHHHH
Confidence 3788999999999 665554433 355667778888887 33322 221 111 0 125667777777999
Q ss_pred HHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcc---hHHHHHHHHHHhcCCEEEe
Q psy15244 830 VESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAG---TGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 830 ~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~G---lA~An~laAi~AGad~VD~ 895 (1427)
.++|+|.|.+.-. .. .++++.+++.. ++|+-.|.=-+.. -++.....++++||+.|-+
T Consensus 176 ~~~Gad~i~~~~~---~~----~~~l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 176 AELGADIVKTSYT---GD----IDSFRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp HHTTCSEEEECCC---SS----HHHHHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHcCCCEEEECCC---CC----HHHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 9999999988742 22 24566677776 7898887643322 2233366777899997755
No 266
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=86.38 E-value=5.3 Score=43.27 Aligned_cols=156 Identities=8% Similarity=0.019 Sum_probs=99.1
Q ss_pred CHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHH
Q psy15244 679 RTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAF 758 (1427)
Q Consensus 679 ~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~ 758 (1427)
+.++.+++++.+-+ .|+..+|+. +-..+..+.++.+++..|+..+ | +...-+ ...
T Consensus 26 ~~~~~~~~~~al~~--gGv~~iel~----------~k~~~~~~~i~~l~~~~~~~~v-----g-----agtvi~---~d~ 80 (214)
T 1wbh_A 26 KLEHAVPMAKALVA--GGVRVLNVT----------LRTECAVDAIRAIAKEVPEAIV-----G-----AGTVLN---PQQ 80 (214)
T ss_dssp SGGGHHHHHHHHHH--TTCCEEEEE----------SCSTTHHHHHHHHHHHCTTSEE-----E-----EESCCS---HHH
T ss_pred CHHHHHHHHHHHHH--cCCCEEEEe----------CCChhHHHHHHHHHHHCcCCEE-----e-----eCEEEE---HHH
Confidence 45677889999988 799999985 2245667788889988875432 1 111122 245
Q ss_pred HHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q psy15244 759 CRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLC 838 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~ 838 (1427)
++.|.++|.|.++.- -.| ...++.++..|. ..-.. + +|+.. +.++.++|+|.|.
T Consensus 81 ~~~A~~aGAd~v~~p--~~d----~~v~~~~~~~g~---~~i~G-~------------~t~~e----~~~A~~~Gad~v~ 134 (214)
T 1wbh_A 81 LAEVTEAGAQFAISP--GLT----EPLLKAATEGTI---PLIPG-I------------STVSE----LMLGMDYGLKEFK 134 (214)
T ss_dssp HHHHHHHTCSCEEES--SCC----HHHHHHHHHSSS---CEEEE-E------------SSHHH----HHHHHHTTCCEEE
T ss_pred HHHHHHcCCCEEEcC--CCC----HHHHHHHHHhCC---CEEEe-c------------CCHHH----HHHHHHCCCCEEE
Confidence 899999999988743 233 345567777876 22211 1 33333 3556789999988
Q ss_pred EccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHh-cCCEE
Q psy15244 839 LKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKA-GADIV 893 (1427)
Q Consensus 839 i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~A-Gad~V 893 (1427)
+-= +. +..-.+.++.++..+|++|+-. +-|....|+-.-+++ |++.|
T Consensus 135 ~Fp-a~---~~gG~~~lk~i~~~~~~ipvva----iGGI~~~n~~~~l~agg~~~v 182 (214)
T 1wbh_A 135 FFP-AE---ANGGVKALQAIAGPFSQVRFCP----TGGISPANYRDYLALKSVLCI 182 (214)
T ss_dssp ETT-TT---TTTHHHHHHHHHTTCTTCEEEE----BSSCCTTTHHHHHTSTTBSCE
T ss_pred Eec-Cc---cccCHHHHHHHhhhCCCCeEEE----ECCCCHHHHHHHHhcCCCeEE
Confidence 821 01 1111467888888888888743 235555677777887 66655
No 267
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=86.37 E-value=3.5 Score=41.47 Aligned_cols=101 Identities=16% Similarity=0.153 Sum_probs=65.8
Q ss_pred CCEEEEEcC----CHHHHHHHHHHHHcCCEEEEEecCCCccC---ccc------cccceEEEcCCCCCcccCCCCHHHHH
Q psy15244 57 MEKILIANR----SEVAIRVARACNEMGIKSVGIYSEQDKFS---AHR------TKVDQAFLVGKGMPPVAAYLNIPEII 123 (1427)
Q Consensus 57 ~kkVLIagr----Geia~riiraa~elGi~~vav~s~~d~~s---~~~------~~aDe~~~i~~~~~~~~~yldi~~Ii 123 (1427)
.++|.|+|- |-++..+++.+.+.|++++.+........ .+. .-+|-++..- + + ....+++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~v----p--~-~~v~~v~ 86 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVV----P--P-KVGLQVA 86 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECS----C--H-HHHHHHH
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEe----C--H-HHHHHHH
Confidence 569999998 88999999999999999777654432210 000 1123332211 1 0 1244555
Q ss_pred HHHHhcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHH
Q psy15244 124 CIAKNNNVDAIHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVL 166 (1427)
Q Consensus 124 ~ia~~~~vDaI~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai 166 (1427)
+-+.+.++..++.-.+. +..++++.+++.|+.++||+---+
T Consensus 87 ~~~~~~g~~~i~~~~~~--~~~~l~~~a~~~Gi~~igpnc~g~ 127 (138)
T 1y81_A 87 KEAVEAGFKKLWFQPGA--ESEEIRRFLEKAGVEYSFGRCIMV 127 (138)
T ss_dssp HHHHHTTCCEEEECTTS--CCHHHHHHHHHHTCEEECSCCHHH
T ss_pred HHHHHcCCCEEEEcCcc--HHHHHHHHHHHCCCEEEcCCcceE
Confidence 55666788888876654 356788899999999999764433
No 268
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=86.35 E-value=7.6 Score=44.28 Aligned_cols=133 Identities=14% Similarity=0.109 Sum_probs=92.1
Q ss_pred HHHHHHHhcCCCEEEEeccCChH----HHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCC------CCCCCCHHHHHHHH
Q psy15244 757 AFCRLASQAGIDIFRVFDPLNSV----PNLVKGMDAVQQVTGGSTIVEATICYAGDLTNP------NKKKYSLNYYEDLA 826 (1427)
Q Consensus 757 ~~v~~a~~~Gid~~rif~~~nd~----~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p------~~~~~~~~~~~~~a 826 (1427)
+.+.+|.++|.+.+-+=.|--++ +.-++.+++++..|. .||+-|-..+..-+. +...++++...+++
T Consensus 86 e~~~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gv---sVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv 162 (305)
T 1rvg_A 86 ESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGV---TVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFM 162 (305)
T ss_dssp HHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTC---EEEEEESCCCCSCC------CCTTCCCHHHHHHHH
T ss_pred HHHHHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCC---EEEEEEeeccCccCCccccccccccCCHHHHHHHH
Confidence 55888999999987554444433 455678889999998 888887766521111 11236788888877
Q ss_pred HHHHHCCCCEEEEc--cccCcCC----HHHHHHHHHHHHHHcCCceEEEeecC-------------------CcchHHHH
Q psy15244 827 KQLVESGAQVLCLK--DMAGLLK----PTAAKLLIGSFREKYPNILIHVHTHD-------------------MAGTGVAT 881 (1427)
Q Consensus 827 ~~l~~~Gad~i~i~--Dt~G~l~----P~~~~~lv~~lr~~~p~ipi~~H~Hn-------------------d~GlA~An 881 (1427)
++ .|+|.|.++ -.=|.-+ |.--.++++.+++.+ ++||-+|.=. +.|.....
T Consensus 163 ~~---TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~-~vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~ 238 (305)
T 1rvg_A 163 ER---TGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLV-PAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPED 238 (305)
T ss_dssp HH---HCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHC-CSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHH
T ss_pred HH---HCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhc-CCCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHH
Confidence 65 499987765 3334433 444467888999998 5898888744 33777888
Q ss_pred HHHHHHhcCCEEEec
Q psy15244 882 TLACVKAGADIVDVA 896 (1427)
Q Consensus 882 ~laAi~AGad~VD~a 896 (1427)
...|+..|+.-|+..
T Consensus 239 i~~ai~~GV~KiNi~ 253 (305)
T 1rvg_A 239 IKKAISLGIAKINTD 253 (305)
T ss_dssp HHHHHHTTEEEEEEC
T ss_pred HHHHHHCCCeEEEEC
Confidence 888888888887664
No 269
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=86.35 E-value=27 Score=40.26 Aligned_cols=142 Identities=16% Similarity=0.177 Sum_probs=88.9
Q ss_pred HHHHHHHHhcCCCEEEEe------ccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCC-------CCCCH---
Q psy15244 756 GAFCRLASQAGIDIFRVF------DPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNK-------KKYSL--- 819 (1427)
Q Consensus 756 ~~~v~~a~~~Gid~~rif------~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~-------~~~~~--- 819 (1427)
+..++.+++.|+..+|+- ...++++.+...++.++++|+ .+-..+.|+..|.+|.. ...+.
T Consensus 30 ~~~~~ilk~~G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl---~v~ld~hysd~wadP~~q~~p~~W~~~~~~~~ 106 (334)
T 1fob_A 30 QALETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGM---SLYLDLHLSDTWADPSDQTTPSGWSTTDLGTL 106 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTC---EEEEEECCSSSCCBTTBCBCCTTSCSSCHHHH
T ss_pred chHHHHHHHcCCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCC---EEEEEeccCCCCCCcccccCccccccCChHHH
Confidence 345778889999999983 344678999999999999999 77777777655566621 01222
Q ss_pred -----HHHHHHHHHHHHCC--CCEEEEcc--ccCcCC-------HHHHHHH----HHHHHHHc--CCceEEEeecCCcch
Q psy15244 820 -----NYYEDLAKQLVESG--AQVLCLKD--MAGLLK-------PTAAKLL----IGSFREKY--PNILIHVHTHDMAGT 877 (1427)
Q Consensus 820 -----~~~~~~a~~l~~~G--ad~i~i~D--t~G~l~-------P~~~~~l----v~~lr~~~--p~ipi~~H~Hnd~Gl 877 (1427)
+|..++++.+.+.| ++.+.+-- +.|.+- ......+ ++++|+.. |+.+|-+|+.+-...
T Consensus 107 ~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~~h~~~~~~~ 186 (334)
T 1fob_A 107 KWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSW 186 (334)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESCTTCH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEEEEcCCcCch
Confidence 34446667777766 45665442 234442 2333333 44566667 888899999873221
Q ss_pred HHHH--HHHHHHhc------CCEEEeccccC
Q psy15244 878 GVAT--TLACVKAG------ADIVDVAADSM 900 (1427)
Q Consensus 878 A~An--~laAi~AG------ad~VD~av~Gm 900 (1427)
+.-+ ...+...| .|+|-.+..+.
T Consensus 187 ~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~ 217 (334)
T 1fob_A 187 DQQNYFYETVLATGELLSTDFDYFGVSYYPF 217 (334)
T ss_dssp HHHHHHHHHHHHTSSSCGGGCCEEEEECCSS
T ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEeCCCC
Confidence 1111 12344556 58888877775
No 270
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=86.32 E-value=0.37 Score=56.72 Aligned_cols=58 Identities=9% Similarity=0.153 Sum_probs=39.1
Q ss_pred EEEEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1368 IIEVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1368 v~~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
|.-..|+.|+....=.....+++. -+..|.++.+|+|.+++|++||.|++||+|++|+
T Consensus 18 V~~~~v~~~~~~~~~~~~G~v~~~-~~~~v~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld 75 (369)
T 1vf7_A 18 VGIVTLEAQTVTLNTELPGRTNAF-RIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQID 75 (369)
T ss_dssp -----------CCEEEEEEECEES-CEEEECCSSCEEEEECCSCSSEEECTTSEEEEEC
T ss_pred eEEEEEEeeccceEEEEEEEEEee-eEEEEEeeCceEEEEEEcCCCCEEcCCCEEEEEC
Confidence 333455666554444455667764 4678999999999999999999999999999986
No 271
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=86.23 E-value=5.2 Score=45.02 Aligned_cols=99 Identities=21% Similarity=0.223 Sum_probs=66.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEcccc-------------------CcCCHHHHHHHHHHHHHHcCCceEEEeecCC--cc
Q psy15244 818 SLNYYEDLAKQLVESGAQVLCLKDMA-------------------GLLKPTAAKLLIGSFREKYPNILIHVHTHDM--AG 876 (1427)
Q Consensus 818 ~~~~~~~~a~~l~~~Gad~i~i~Dt~-------------------G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd--~G 876 (1427)
+++...++++.+.+.|||.|-|.=-. .-.+...+.++++.+|+..+++||.+-+.-+ +.
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~ 111 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYA 111 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 56778888888888888876653110 1144556778999999986699998876644 23
Q ss_pred hHHHH-HHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCC
Q psy15244 877 TGVAT-TLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKR 922 (1427)
Q Consensus 877 lA~An-~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~ 922 (1427)
.++.+ +-.|.++|+|.+=+.=.++- ..+++...++..|.+
T Consensus 112 ~g~~~f~~~~~~aGvdGvIipDlp~e------e~~~~~~~~~~~gl~ 152 (271)
T 3nav_A 112 RGIDDFYQRCQKAGVDSVLIADVPTN------ESQPFVAAAEKFGIQ 152 (271)
T ss_dssp TCHHHHHHHHHHHTCCEEEETTSCGG------GCHHHHHHHHHTTCE
T ss_pred HhHHHHHHHHHHCCCCEEEECCCCHH------HHHHHHHHHHHcCCe
Confidence 34444 44778999998765443332 245677788877655
No 272
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=86.18 E-value=7.7 Score=43.86 Aligned_cols=205 Identities=18% Similarity=0.191 Sum_probs=116.8
Q ss_pred eEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCC---CCce
Q psy15244 659 ILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIP---NIPF 735 (1427)
Q Consensus 659 v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p---~~~~ 735 (1427)
|.+|--.+=||.+. .+.++.++.|..+-+ .|.+.|.++|-+|-..+-.-..++.|+|+..+-+.+. ++++
T Consensus 21 lN~TpdSFsdgg~~-----~~~~~a~~~a~~~v~--~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~pi 93 (282)
T 1aj0_A 21 LNVTPDSFSDGGTH-----NSLIDAVKHANLMIN--AGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWI 93 (282)
T ss_dssp EECCTTTSCCCCCC-----THHHHHHHHHHHHHH--HTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EeCCCCcccccccc-----CCHHHHHHHHHHHHH--CCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeE
Confidence 34444456777652 566888888888877 6999999998444111111112455666543333321 4554
Q ss_pred eeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCC-
Q psy15244 736 QMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNK- 814 (1427)
Q Consensus 736 qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~- 814 (1427)
+.=. +- -+.+++|.++|.++|.=....++ ...++.+++.|. -+. .+.+. +.|..
T Consensus 94 SIDT----------~~----~~va~aAl~aGa~iINdvsg~~d----~~~~~~~a~~~~---~vV-lmh~~---G~p~tm 148 (282)
T 1aj0_A 94 SVDT----------SK----PEVIRESAKVGAHIINDIRSLSE----PGALEAAAETGL---PVC-LMHMQ---GNPKTM 148 (282)
T ss_dssp EEEC----------CC----HHHHHHHHHTTCCEEEETTTTCS----TTHHHHHHHHTC---CEE-EECCS---SCTTCC
T ss_pred EEeC----------CC----HHHHHHHHHcCCCEEEECCCCCC----HHHHHHHHHhCC---eEE-EEccC---CCCccc
Confidence 4322 22 33477888899999875555432 344556677777 221 11222 23321
Q ss_pred ---CCCC------HHHHHHHHHHHHHCCCC--EEEEccc-cCcC-CHHHHHHHHHHHHHHc-CCceEEEee---------
Q psy15244 815 ---KKYS------LNYYEDLAKQLVESGAQ--VLCLKDM-AGLL-KPTAAKLLIGSFREKY-PNILIHVHT--------- 871 (1427)
Q Consensus 815 ---~~~~------~~~~~~~a~~l~~~Gad--~i~i~Dt-~G~l-~P~~~~~lv~~lr~~~-p~ipi~~H~--------- 871 (1427)
..|+ .+++.+.++.+.++|+. .|.| |. .|.. +..+-.++++.+++-- ++.|+-+=.
T Consensus 149 ~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DPg~gf~k~~~~n~~ll~~l~~~~~~g~P~l~G~Srksfig~~ 227 (282)
T 1aj0_A 149 QEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLL-DPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQL 227 (282)
T ss_dssp SCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEECCTTCHHHHHH
T ss_pred cccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEE-eCCCCcccCHHHHHHHHHHHHHHhcCCCCEEEEECccHhHHhh
Confidence 1122 78999999999999987 4444 53 2322 3456667777766321 366653311
Q ss_pred -----cCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 872 -----HDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 872 -----Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
.+-.+-.++.+..|+..||++|.+.
T Consensus 228 ~g~~~~~rl~~t~a~~~~a~~~ga~Ivrvh 257 (282)
T 1aj0_A 228 LNVGPSERLSGSLACAVIAAMQGAHIIRVH 257 (282)
T ss_dssp HTCCGGGCHHHHHHHHHHHHHTTCSEEEES
T ss_pred cCCCHHHHHHHHHHHHHHHHHCCCeEEEeC
Confidence 2223333466667788889988775
No 273
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=86.14 E-value=16 Score=39.74 Aligned_cols=179 Identities=19% Similarity=0.208 Sum_probs=106.8
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccC--CCcchH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSN--YSPAEV 755 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~--~~~nvv 755 (1427)
-+.+|+.++++...+ .|+.++-+..+. ++..++...++.+.. + ..+||.. .+..+.
T Consensus 16 ~t~~~i~~l~~~a~~--~~~~aVcv~p~~----------------v~~~~~~l~~~~v~v-~---~vigFP~G~~~~~~k 73 (220)
T 1ub3_A 16 ATLEEVAKAAEEALE--YGFYGLCIPPSY----------------VAWVRARYPHAPFRL-V---TVVGFPLGYQEKEVK 73 (220)
T ss_dssp CCHHHHHHHHHHHHH--HTCSEEECCGGG----------------HHHHHHHCTTCSSEE-E---EEESTTTCCSCHHHH
T ss_pred CCHHHHHHHHHHHHH--hCCCEEEECHHH----------------HHHHHHHhCCCCceE-E---EEecCCCCCCchHHH
Confidence 577899999988887 588888775431 223334444433221 1 1235532 344555
Q ss_pred HHHHHHHHhcCCCEEEEeccCCh-----HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHH
Q psy15244 756 GAFCRLASQAGIDIFRVFDPLNS-----VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLV 830 (1427)
Q Consensus 756 ~~~v~~a~~~Gid~~rif~~~nd-----~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~ 830 (1427)
-.-++.|++.|.|.+-+...... .+.+..-+..++++-.. ..+-+ |--+. ..+.+.+...++.+.
T Consensus 74 ~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~-~~lkv-Ilet~--------~l~~e~i~~a~~ia~ 143 (220)
T 1ub3_A 74 ALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQ-AVLKV-ILETG--------YFSPEEIARLAEAAI 143 (220)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTT-SEEEE-ECCGG--------GSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcC-CCceE-EEecC--------CCCHHHHHHHHHHHH
Confidence 56689999999999988776553 34444444444443210 12222 22221 357889999999999
Q ss_pred HCCCCEEEEcc--ccCcCCHHHHHHHHHHHHHHcCCceEEEee--cCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 831 ESGAQVLCLKD--MAGLLKPTAAKLLIGSFREKYPNILIHVHT--HDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 831 ~~Gad~i~i~D--t~G~l~P~~~~~lv~~lr~~~p~ipi~~H~--Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
++|||.|--.= +.|-.+|+++..+.+... +.++|-.=. + | ...+++-+++||+.+=+|
T Consensus 144 eaGADfVKTsTGf~~~gat~~dv~~m~~~vg---~~v~VkaaGGir-t----~~~al~~i~aGa~RiG~S 205 (220)
T 1ub3_A 144 RGGADFLKTSTGFGPRGASLEDVALLVRVAQ---GRAQVKAAGGIR-D----RETALRMLKAGASRLGTS 205 (220)
T ss_dssp HHTCSEEECCCSSSSCCCCHHHHHHHHHHHT---TSSEEEEESSCC-S----HHHHHHHHHTTCSEEEET
T ss_pred HhCCCEEEeCCCCCCCCCCHHHHHHHHHhhC---CCCeEEEECCCC-C----HHHHHHHHHCCCcccchh
Confidence 99999876441 235568877776554431 245553322 2 2 256677778999977554
No 274
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=85.89 E-value=24 Score=41.95 Aligned_cols=99 Identities=15% Similarity=0.194 Sum_probs=67.1
Q ss_pred HHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q psy15244 760 RLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCL 839 (1427)
Q Consensus 760 ~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i 839 (1427)
+..++.|+|.+ ++--+.++.+++.+++.+++.|. -+-+.+++. ++. +.+=.-+.+.+..+.++|++.|.|
T Consensus 146 ~~L~~~GvDll-l~ETi~~~~Eakaa~~a~~~~~l---Pv~iS~T~~-----~~G-~l~G~~~~~~~~~l~~~~~~avGv 215 (406)
T 1lt8_A 146 EVFMKKNVDFL-IAEYFEHVEEAVWAVETLIASGK---PVAATMAIG-----PEG-DLHGVPPGEAAVRLVKAGASIIGV 215 (406)
T ss_dssp HHHHHHTCSEE-EECCCSCHHHHHHHHHHHGGGTS---CEEEEECCB-----TTB-CTTCCCHHHHHHHHHTTTCSEEEE
T ss_pred HHHhhCCCCEE-EEcccCCHHHHHHHHHHHHHhCC---cEEEEEEEC-----CCC-CcCCCcHHHHHHHhhcCCCCEEEe
Confidence 34457899997 55677889999999999998887 333333332 121 122233556666777789988887
Q ss_pred ccccCcCCHHHHHHHHHHHHHHc----CCceEEEee
Q psy15244 840 KDMAGLLKPTAAKLLIGSFREKY----PNILIHVHT 871 (1427)
Q Consensus 840 ~Dt~G~l~P~~~~~lv~~lr~~~----p~ipi~~H~ 871 (1427)
-=+ .-|..+..+++.|++.. .++||.++.
T Consensus 216 NC~---~gP~~~~~~l~~l~~~~~~~g~~~pl~vyP 248 (406)
T 1lt8_A 216 NCH---FDPTISLKTVKLMKEGLEAAQLKAHLMSQP 248 (406)
T ss_dssp ESS---SCHHHHHHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred cCC---CCHHHHHHHHHHHHHhhhhcCCCccEEEec
Confidence 532 45999999999998763 257877655
No 275
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=85.79 E-value=3.4 Score=45.94 Aligned_cols=202 Identities=17% Similarity=0.082 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHH
Q psy15244 681 YDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCR 760 (1427)
Q Consensus 681 ~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~ 760 (1427)
.+..++++.+.+ .|+..|++....... . .....++.++.+++.. ++|++.. |+-+-+++ ++
T Consensus 30 ~~~~~~a~~~~~--~Ga~~i~v~d~~~~~---~-~~g~~~~~i~~i~~~~-~iPvi~~-------ggi~~~~~-----i~ 90 (266)
T 2w6r_A 30 ILLRDWVVEVEK--RGAGEILLTSIDRDG---T-KSGYDTEMIRFVRPLT-TLPIIAS-------GGAGKMEH-----FL 90 (266)
T ss_dssp EEHHHHHHHHHH--HTCSEEEEEETTTSS---C-SSCCCHHHHHHHGGGC-CSCEEEE-------SCCCSTHH-----HH
T ss_pred CCHHHHHHHHHH--CCCCEEEEEecCccc---C-CCcccHHHHHHHHHhc-CCCEEEE-------CCCCCHHH-----HH
Confidence 356788888887 699999984321100 0 1112367788887764 5665531 23222333 67
Q ss_pred HHHhcCCCEEEEeccCC----hHHHHHHHHHHHHHhc--CCCcEEEEEEE----------eeccCCCCCCCCCCHHHHHH
Q psy15244 761 LASQAGIDIFRVFDPLN----SVPNLVKGMDAVQQVT--GGSTIVEATIC----------YAGDLTNPNKKKYSLNYYED 824 (1427)
Q Consensus 761 ~a~~~Gid~~rif~~~n----d~~~~~~~i~~a~~~G--~~~~~v~~~i~----------~t~d~~~p~~~~~~~~~~~~ 824 (1427)
.+.+.|+|.+.+....- +.+.++..++ ..| .. .+...+. ++.++. ..+.....+
T Consensus 91 ~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~---~~g~~~~--~i~~~~d~~~~~g~~~v~~~g~~-----~~~~~~~~e 160 (266)
T 2w6r_A 91 EAFLAGADKALAASVFHFREIDMRELKEYLK---KHGGSGQ--AVVVAIDAKRVDGEFMVFTHSGK-----KNTGILLRD 160 (266)
T ss_dssp HHHHHTCSEEECCCCC------CHHHHHHCC-------CCC--EEEEEEEEEEETTEEEEEETTTT-----EEEEEEHHH
T ss_pred HHHHcCCcHhhhhHHHHhCCCCHHHHHHHHH---HcCCCCC--EEEEEEEEEecCCCEEEEECCCc-----eecchhHHH
Confidence 77889999998887765 4445554433 333 10 1111111 110000 000012456
Q ss_pred HHHHHHHCCCCEEEEcc--ccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchH-HHHHHHHHHhcCCEEEeccccCC
Q psy15244 825 LAKQLVESGAQVLCLKD--MAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTG-VATTLACVKAGADIVDVAADSMS 901 (1427)
Q Consensus 825 ~a~~l~~~Gad~i~i~D--t~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA-~An~laAi~AGad~VD~av~GmG 901 (1427)
+++.+.++|++.|.+-+ ..|..... -.++++.+++.. ++|+-.= .|.. ..++..+.++||+.|=+.-.=+
T Consensus 161 ~~~~~~~~G~~~i~~t~~~~~g~~~g~-~~~~i~~l~~~~-~ipvia~----GGI~~~ed~~~~~~~Gadgv~vgsal~- 233 (266)
T 2w6r_A 161 WVVEVEKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLT-TLPIIAS----GGAGKMEHFLEAFLAGADAALAASVFH- 233 (266)
T ss_dssp HHHHHHHTTCSEEEEEETTTTTTCSCC-CHHHHHHHGGGC-CSCEEEE----SCCCSHHHHHHHHHHTCSEEEESTTTC-
T ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCC-CHHHHHHHHHHc-CCCEEEe----CCCCCHHHHHHHHHcCCHHHHccHHHH-
Confidence 77888889999999854 33433322 145778888776 7887553 3554 3567777788999875543322
Q ss_pred CCCCCC-cHHHHHHHHHhCCC
Q psy15244 902 GICSQP-AMGTIVSCLENTDK 921 (1427)
Q Consensus 902 ~~tgn~-~lE~vv~~L~~~g~ 921 (1427)
.++ +.+++...|+..|+
T Consensus 234 ---~~~~~~~~~~~~l~~~g~ 251 (266)
T 2w6r_A 234 ---FREIDMRELKEYLKKHGV 251 (266)
T ss_dssp ---------------------
T ss_pred ---cCCCCHHHHHHHHHHCCC
Confidence 233 56677777766554
No 276
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=85.71 E-value=6.1 Score=42.99 Aligned_cols=168 Identities=8% Similarity=0.043 Sum_probs=98.8
Q ss_pred HHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHHH
Q psy15244 682 DLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRL 761 (1427)
Q Consensus 682 d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~ 761 (1427)
++.++++.+.+ .|+..+++.+ | +.++.+++.. +.++..+++.. .-+..-+.++ -...++.
T Consensus 37 ~~~~~a~~~~~--~G~~~i~~~~--------------~-~~i~~i~~~~-~~p~i~~~~~~-~~~~~~~i~~-~~~~i~~ 96 (234)
T 1yxy_A 37 IMPLMAKAAQE--AGAVGIRANS--------------V-RDIKEIQAIT-DLPIIGIIKKD-YPPQEPFITA-TMTEVDQ 96 (234)
T ss_dssp SHHHHHHHHHH--HTCSEEEEES--------------H-HHHHHHHTTC-CSCEEEECBCC-CTTSCCCBSC-SHHHHHH
T ss_pred hHHHHHHHHHH--CCCcEeecCC--------------H-HHHHHHHHhC-CCCEEeeEcCC-CCccccccCC-hHHHHHH
Confidence 67889998888 6998887632 2 4477777764 56765444432 0011111111 1234888
Q ss_pred HHhcCCCEEEEeccCCh-H--HHHHHHHHHHHHh--cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCE
Q psy15244 762 ASQAGIDIFRVFDPLNS-V--PNLVKGMDAVQQV--TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQV 836 (1427)
Q Consensus 762 a~~~Gid~~rif~~~nd-~--~~~~~~i~~a~~~--G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~ 836 (1427)
+.++|.|.+.+-..... . ..+...++.+++. +. .+-. . .++++. ++.+.++|+|.
T Consensus 97 ~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~---~v~~----~---------~~t~~e----a~~a~~~Gad~ 156 (234)
T 1yxy_A 97 LAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQ---LLMA----D---------ISTFDE----GLVAHQAGIDF 156 (234)
T ss_dssp HHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTC---EEEE----E---------CSSHHH----HHHHHHTTCSE
T ss_pred HHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCC---eEEE----e---------CCCHHH----HHHHHHcCCCE
Confidence 99999999876554321 1 1345677777777 44 3221 1 134333 67788899999
Q ss_pred EE--Ecccc-Cc--CCHHHHHHHHHHHHHHcCCceEEEeecCCcchH-HHHHHHHHHhcCCEEEec
Q psy15244 837 LC--LKDMA-GL--LKPTAAKLLIGSFREKYPNILIHVHTHDMAGTG-VATTLACVKAGADIVDVA 896 (1427)
Q Consensus 837 i~--i~Dt~-G~--l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA-~An~laAi~AGad~VD~a 896 (1427)
|. +-... |. ..+. -.++++.+++. ++||.. +-|.. ..|+.+++++|||.|=+.
T Consensus 157 i~~~v~g~~~~~~~~~~~-~~~~i~~~~~~--~ipvia----~GGI~s~~~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 157 VGTTLSGYTPYSRQEAGP-DVALIEALCKA--GIAVIA----EGKIHSPEEAKKINDLGVAGIVVG 215 (234)
T ss_dssp EECTTTTSSTTSCCSSSC-CHHHHHHHHHT--TCCEEE----ESCCCSHHHHHHHHTTCCSEEEEC
T ss_pred EeeeccccCCCCcCCCCC-CHHHHHHHHhC--CCCEEE----ECCCCCHHHHHHHHHCCCCEEEEc
Confidence 82 22111 11 1111 13556777764 677665 34666 778888899999987543
No 277
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=85.68 E-value=0.32 Score=51.63 Aligned_cols=45 Identities=24% Similarity=0.346 Sum_probs=39.3
Q ss_pred ecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEE--------------------------E--EecCCCeeCCCCEEE
Q psy15244 1373 VKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKE--------------------------I--FVEVGGQVAQNDLVV 1423 (1427)
Q Consensus 1373 V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~--------------------------i--~v~~G~~V~~g~~L~ 1423 (1427)
|++|+.|++||+|+ -+..|.|.++|+|.- + .|++||.|++|+.|+
T Consensus 85 V~dG~~V~~GdvLA------Kd~AIiaEIdG~V~fgkgkrrivI~~~~Ge~~eylIPk~k~i~~~V~eGd~V~~Ge~L~ 157 (193)
T 2xha_A 85 LRVGTKVKQGLPLS------KNEEYICELDGKIVEIERMKKVVVQTPDGEQDVYYIPLDVFDRDRIKKGKEVKQGEMLA 157 (193)
T ss_dssp CCTTCEECTTSBSS------TTSCSBCCSSEEEEEEEEEEEEEEECTTSCEEEEEEEGGGCCTTTSCTTCEECTTCEEE
T ss_pred cCCCCEEcCCCEEe------cCCeEEEccceEEEECCCeEEEEEECCCCCEEEEEeCCCCccccccCCCCEECCCCCcc
Confidence 89999999999998 467889999998862 3 789999999999987
No 278
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=85.47 E-value=0.37 Score=57.74 Aligned_cols=115 Identities=13% Similarity=0.075 Sum_probs=73.9
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEeC
Q psy15244 58 EKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHPG 137 (1427)
Q Consensus 58 kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~pg 137 (1427)
.+|+|+|-|.++..+++.+++.|+.+++|+.+++........--. +..+ +..+. .+++-+.-.++|+|+..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~-vi~G-------Dat~~-~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMK-VFYG-------DATRM-DLLESAGAAKAEVLINA 75 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCC-CEES-------CTTCH-HHHHHTTTTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCe-EEEc-------CCCCH-HHHHhcCCCccCEEEEC
Confidence 479999999999999999999999999998887753332222212 2222 11333 44555555678999988
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCC
Q psy15244 138 YGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPII 187 (1427)
Q Consensus 138 ~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp 187 (1427)
.+....|..++..+.+.+ |....+..+.|...... +.++|+..+
T Consensus 76 ~~~~~~n~~i~~~ar~~~-----p~~~Iiara~~~~~~~~-L~~~Gad~V 119 (413)
T 3l9w_A 76 IDDPQTNLQLTEMVKEHF-----PHLQIIARARDVDHYIR-LRQAGVEKP 119 (413)
T ss_dssp CSSHHHHHHHHHHHHHHC-----TTCEEEEEESSHHHHHH-HHHTTCSSC
T ss_pred CCChHHHHHHHHHHHHhC-----CCCeEEEEECCHHHHHH-HHHCCCCEE
Confidence 775545555555555543 33344455666655544 467887753
No 279
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=85.27 E-value=4.9 Score=42.92 Aligned_cols=73 Identities=14% Similarity=0.211 Sum_probs=50.6
Q ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 57 MEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 57 ~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
|+||||.| .|.++..+++.+.+.|++++++...++.... ..+....+. .+..|.+.+.++.+ ++|+|+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~------~Dl~d~~~~~~~~~--~~d~vi 72 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI---ENEHLKVKK------ADVSSLDEVCEVCK--GADAVI 72 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC---CCTTEEEEC------CCTTCHHHHHHHHT--TCSEEE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh---ccCceEEEE------ecCCCHHHHHHHhc--CCCEEE
Confidence 67999999 6999999999999999999988765443211 112222221 23467778877776 589988
Q ss_pred eCCCc
Q psy15244 136 PGYGF 140 (1427)
Q Consensus 136 pg~gf 140 (1427)
-..|.
T Consensus 73 ~~a~~ 77 (227)
T 3dhn_A 73 SAFNP 77 (227)
T ss_dssp ECCCC
T ss_pred EeCcC
Confidence 76553
No 280
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=85.22 E-value=6.1 Score=44.74 Aligned_cols=131 Identities=15% Similarity=0.159 Sum_probs=91.0
Q ss_pred HHHHHHHHhcCCCEEEEeccCChH----HHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCC------CCCCCHHHHHHH
Q psy15244 756 GAFCRLASQAGIDIFRVFDPLNSV----PNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPN------KKKYSLNYYEDL 825 (1427)
Q Consensus 756 ~~~v~~a~~~Gid~~rif~~~nd~----~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~------~~~~~~~~~~~~ 825 (1427)
.+.+.+|.++|.+.+-+=.|.-++ +.-++.++.++..|. .||+-|-..| +.+| ...++++...++
T Consensus 93 ~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gv---sVEaElG~vg--G~Ed~~~~~~~~yT~Peea~~F 167 (288)
T 3q94_A 93 FEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNV---SVEAELGTVG--GQEDDVIAEGVIYADPAECKHL 167 (288)
T ss_dssp HHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTC---EEEEEESBCB--CSCSSCGGGGCBCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCC---eEEEEeeeec--cccCCcCCccccCCCHHHHHHH
Confidence 345889999999887665554444 344677888888888 8888876664 2222 124678877776
Q ss_pred HHHHHHCCCCEEEEc--cccCcC--CHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEecc
Q psy15244 826 AKQLVESGAQVLCLK--DMAGLL--KPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 826 a~~l~~~Gad~i~i~--Dt~G~l--~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av 897 (1427)
++ +.|+|.|.++ -.=|.- .|.-=.++++.+++.+ ++||-+|.= +|........|++.|+.-|+...
T Consensus 168 v~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v-~vpLVlHGg--SG~~~e~i~~ai~~Gv~KiNi~T 237 (288)
T 3q94_A 168 VE---ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT-GVPLVLHGG--TGIPTADIEKAISLGTSKINVNT 237 (288)
T ss_dssp HH---HHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH-CSCEEECCC--TTCCHHHHHHHHHTTEEEEEECH
T ss_pred HH---HHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc-CCCEEEeCC--CCCCHHHHHHHHHcCCeEEEECh
Confidence 65 4699987774 111221 2444456778888888 688877664 58888999999999999988753
No 281
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=85.20 E-value=2.4 Score=42.75 Aligned_cols=101 Identities=17% Similarity=0.170 Sum_probs=64.8
Q ss_pred CCEEEEEcC----CHHHHHHHHHHHHcCCEEEEEecC--CCcc---Ccccc------ccceEEEcCCCCCcccCCCCHHH
Q psy15244 57 MEKILIANR----SEVAIRVARACNEMGIKSVGIYSE--QDKF---SAHRT------KVDQAFLVGKGMPPVAAYLNIPE 121 (1427)
Q Consensus 57 ~kkVLIagr----Geia~riiraa~elGi~~vav~s~--~d~~---s~~~~------~aDe~~~i~~~~~~~~~yldi~~ 121 (1427)
.++|.|+|. |..+..+++.+.+.|++++.+... .+.. ..+.. -.|-++..- + + .....
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~v-p--~----~~~~~ 85 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFR-P--P----SALMD 85 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECS-C--H----HHHTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEe-C--H----HHHHH
Confidence 458999997 678999999999999997777654 2211 00111 123232211 0 0 11234
Q ss_pred HHHHHHhcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHH
Q psy15244 122 IICIAKNNNVDAIHPGYGFLSEREDFAKAVIGAGLEFIGPAPNVL 166 (1427)
Q Consensus 122 Ii~ia~~~~vDaI~pg~gflsE~~~~a~~~e~~Gi~fiGps~eai 166 (1427)
+++-|.+.++.+|+...|+. +.++++.+++.|+.++||.---+
T Consensus 86 v~~~~~~~gi~~i~~~~g~~--~~~~~~~a~~~Gir~vgpnc~g~ 128 (140)
T 1iuk_A 86 HLPEVLALRPGLVWLQSGIR--HPEFEKALKEAGIPVVADRCLMV 128 (140)
T ss_dssp THHHHHHHCCSCEEECTTCC--CHHHHHHHHHTTCCEEESCCHHH
T ss_pred HHHHHHHcCCCEEEEcCCcC--HHHHHHHHHHcCCEEEcCCccce
Confidence 45556667788888777764 46789999999999999764433
No 282
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=85.18 E-value=1.1 Score=49.74 Aligned_cols=103 Identities=16% Similarity=0.201 Sum_probs=72.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHH--HHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEE
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTA--AKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVD 894 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~--~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD 894 (1427)
.|...+.+-++.+.++|+|.+-+-=|-|...|.- -...|++||+..|++++.+|.+-+.--.. .-.++++|||+|.
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~--i~~~~~aGAd~it 114 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDAL--IESFAKAGATSIV 114 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHH--HHHHHHHTCSEEE
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHH--HHHHHHcCCCEEE
Confidence 4555677888899999999655544447655422 23678899999889999999995544332 2356799999996
Q ss_pred eccccCCCCCCCCcHHHHHHHHHhCCCCCCCCh
Q psy15244 895 VAADSMSGICSQPAMGTIVSCLENTDKRCGIDL 927 (1427)
Q Consensus 895 ~av~GmG~~tgn~~lE~vv~~L~~~g~~tgidl 927 (1427)
.-.-. + ..+..++..++..|...|+.+
T Consensus 115 vH~Ea----~--~~~~~~i~~ir~~G~k~Gval 141 (246)
T 3inp_A 115 FHPEA----S--EHIDRSLQLIKSFGIQAGLAL 141 (246)
T ss_dssp ECGGG----C--SCHHHHHHHHHTTTSEEEEEE
T ss_pred Ecccc----c--hhHHHHHHHHHHcCCeEEEEe
Confidence 54322 1 467788888888887766655
No 283
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=85.09 E-value=6.7 Score=44.42 Aligned_cols=130 Identities=15% Similarity=0.115 Sum_probs=90.0
Q ss_pred HHHHHHHHhcCCCEEEEeccCCh----HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCC-----C-CCCCCCHHHHHHH
Q psy15244 756 GAFCRLASQAGIDIFRVFDPLNS----VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTN-----P-NKKKYSLNYYEDL 825 (1427)
Q Consensus 756 ~~~v~~a~~~Gid~~rif~~~nd----~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~-----p-~~~~~~~~~~~~~ 825 (1427)
.+.+.+|.++|.+.+-+=.|--+ ++.-++.++.++..|. .+|+-|-..|.--+ + +...++++...++
T Consensus 87 ~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gv---sVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~F 163 (286)
T 1gvf_A 87 LDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDC---SVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRF 163 (286)
T ss_dssp HHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTC---EEEEEESCCC-----------CCSSCCHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcCC---EEEEEEeeccCcccCcccccccccCCCHHHHHHH
Confidence 35688999999988754444333 3455678889999998 88888766542111 1 1123678887777
Q ss_pred HHHHHHCCCCEEEEccccCcC------CHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 826 AKQLVESGAQVLCLKDMAGLL------KPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 826 a~~l~~~Gad~i~i~Dt~G~l------~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
+++ .|+|.|.++ .|.. .|.-=.++++.+++.+ ++||-+|. -+|........|++.|+.-|+..
T Consensus 164 v~~---TgvD~LAva--iGt~HG~Y~~~p~Ld~~~L~~I~~~~-~vpLVlHG--gSG~~~e~i~~ai~~Gv~KiNi~ 232 (286)
T 1gvf_A 164 VEL---TGVDSLAVA--IGTAHGLYSKTPKIDFQRLAEIREVV-DVPLVLHG--ASDVPDEFVRRTIELGVTKVNVA 232 (286)
T ss_dssp HHH---HCCSEEEEC--SSCCSSCCSSCCCCCHHHHHHHHHHC-CSCEEECC--CTTCCHHHHHHHHHTTEEEEEEC
T ss_pred HHH---HCCCEEEee--cCccccCcCCCCccCHHHHHHHHHhc-CCCEEEEC--CCCCCHHHHHHHHHCCCeEEEEC
Confidence 764 699977764 3322 3444456788889888 68887776 56888888999999999988765
No 284
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=85.00 E-value=13 Score=40.82 Aligned_cols=101 Identities=13% Similarity=0.099 Sum_probs=70.0
Q ss_pred HHHHHHHHHhcCCCEEEEeccC--------------ChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPL--------------NSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLN 820 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~--------------nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~ 820 (1427)
..+.++.+++.|.+.|-++..- .+-..++...+.+++.|+ .+...-++. + .+.+
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl---~i~~~~~~~----~-----~~~~ 91 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGI---KIVGTGVYV----A-----EKSS 91 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTC---EEEEEEEEC----C-----SSTT
T ss_pred HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCC---eEEEEeccC----C-----ccHH
Confidence 6678999999999999998531 234456777778888998 554332322 1 2456
Q ss_pred HHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCC
Q psy15244 821 YYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDM 874 (1427)
Q Consensus 821 ~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd 874 (1427)
.+.+.++.+.++|+..|.+.- | +....++....+ .. ++.|.+|.|..
T Consensus 92 ~~~~~i~~A~~lGa~~v~~~~--~---~~~~~~l~~~a~-~~-gv~l~~En~~~ 138 (262)
T 3p6l_A 92 DWEKMFKFAKAMDLEFITCEP--A---LSDWDLVEKLSK-QY-NIKISVHNHPQ 138 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEECC--C---GGGHHHHHHHHH-HH-TCEEEEECCSS
T ss_pred HHHHHHHHHHHcCCCEEEecC--C---HHHHHHHHHHHH-Hh-CCEEEEEeCCC
Confidence 788888999999999998852 2 344455555444 44 78999999954
No 285
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=84.97 E-value=22 Score=40.95 Aligned_cols=141 Identities=18% Similarity=0.191 Sum_probs=88.1
Q ss_pred HHHHHHhcCCCEEEEe------ccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCC-----CCC-C-------
Q psy15244 758 FCRLASQAGIDIFRVF------DPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNK-----KKY-S------- 818 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif------~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~-----~~~-~------- 818 (1427)
+.+..+++|+..|||- ...++++.+..+++.|+++|+ .+-.-+-|+..+.+|.. .-. +
T Consensus 32 ~~~ilk~~G~N~VRi~~w~~P~~g~~~~~~~~~~~~~A~~~Gl---kV~ld~Hysd~WadPg~Q~~p~~W~~~~~~~~~~ 108 (332)
T 1hjs_A 32 LENILAANGVNTVRQRVWVNPADGNYNLDYNIAIAKRAKAAGL---GVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWK 108 (332)
T ss_dssp HHHHHHHTTCCEEEEEECSSCTTCTTSHHHHHHHHHHHHHTTC---EEEEEECCSSSCCBTTBCBCCTTCCCSHHHHHHH
T ss_pred HHHHHHHCCCCEEEEeeeeCCCCCcCCHHHHHHHHHHHHHCCC---EEEEEeccCCCcCCccccCCccccccchHHHHHH
Confidence 4667788999999995 346688999999999999999 77777666544445521 011 2
Q ss_pred -HHHHHHHHHHHHHCCC--CEEEEcc--ccCcC-------CHHHHHHH----HHHHHHHc--CCceEEEeecCCcchHHH
Q psy15244 819 -LNYYEDLAKQLVESGA--QVLCLKD--MAGLL-------KPTAAKLL----IGSFREKY--PNILIHVHTHDMAGTGVA 880 (1427)
Q Consensus 819 -~~~~~~~a~~l~~~Ga--d~i~i~D--t~G~l-------~P~~~~~l----v~~lr~~~--p~ipi~~H~Hnd~GlA~A 880 (1427)
.+|..++++.+.+.|+ +.+.+.- +.|.+ ......++ ++++|+.. |+..+-+|..+-.-.+.-
T Consensus 109 ~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~~~~~~~~ 188 (332)
T 1hjs_A 109 LYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQ 188 (332)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCCccchHHH
Confidence 4667788888888774 5554421 11222 23444444 45577667 888888888763222211
Q ss_pred -HHHH-HHHhc------CCEEEeccccCC
Q psy15244 881 -TTLA-CVKAG------ADIVDVAADSMS 901 (1427)
Q Consensus 881 -n~la-Ai~AG------ad~VD~av~GmG 901 (1427)
..+. ..+.| .|+|-.+..++=
T Consensus 189 ~~~~d~~~~~g~~~~~~~DvIG~syYp~w 217 (332)
T 1hjs_A 189 NWWYTNVLKQGTLELSDFDMMGVSFYPFY 217 (332)
T ss_dssp HHHHHHHHTTSSSCGGGCCEEEEECCSSS
T ss_pred HHHHHHHHhcCCCCCCCcCEEEEecCccc
Confidence 1112 22344 688888877753
No 286
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=84.92 E-value=6.7 Score=43.02 Aligned_cols=126 Identities=23% Similarity=0.377 Sum_probs=79.9
Q ss_pred CcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHH
Q psy15244 751 SPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQL 829 (1427)
Q Consensus 751 ~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l 829 (1427)
.+..+.+..+.+.+.|...+++ +..+. ++.+|+. +. -+ ..++-. |+.+-.- ..++ +.+-++++
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~----~~~~~----i~~ir~~v~~---Pv-ig~~k~-d~~~~~~-~I~~--~~~~i~~~ 97 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAVAVRI----EGIDN----LRMTRSLVSV---PI-IGIIKR-DLDESPV-RITP--FLDDVDAL 97 (232)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE----ESHHH----HHHHHTTCCS---CE-EEECBC-CCSSCCC-CBSC--SHHHHHHH
T ss_pred CcchHHHHHHHHHHCCCeEEEE----CCHHH----HHHHHHhcCC---CE-EEEEee-cCCCcce-EeCc--cHHHHHHH
Confidence 3556777888888899999887 23333 3334433 22 11 111111 1111000 0111 23346678
Q ss_pred HHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccC
Q psy15244 830 VESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSM 900 (1427)
Q Consensus 830 ~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~Gm 900 (1427)
.++|||.|.+ |++....|....++++.+++. ++.+..-+|+ ...+..|.++|||+|=+++.|+
T Consensus 98 ~~~Gad~V~l-~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~ 160 (232)
T 3igs_A 98 AQAGAAIIAV-DGTARQRPVAVEALLARIHHH--HLLTMADCSS-----VDDGLACQRLGADIIGTTMSGY 160 (232)
T ss_dssp HHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--TCEEEEECCS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHcCCCEEEE-CccccCCHHHHHHHHHHHHHC--CCEEEEeCCC-----HHHHHHHHhCCCCEEEEcCccC
Confidence 8899998855 787778898899999999865 6787777775 5667889999999996655555
No 287
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=84.90 E-value=15 Score=41.09 Aligned_cols=147 Identities=11% Similarity=0.127 Sum_probs=81.4
Q ss_pred HHHHHHHHHhcCCCEEEEeccCChH---------------------HHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCC
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPLNSV---------------------PNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPN 813 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~nd~---------------------~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~ 813 (1427)
..+.++...++|+|.+.+=.+.+|- ..+-..++.+++.+.+- -+ ..+.|. +|-
T Consensus 33 ~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~-Pv-~lm~y~----n~v 106 (268)
T 1qop_A 33 SLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTI-PI-GLLMYA----NLV 106 (268)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSS-CE-EEEECH----HHH
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC-CE-EEEEcc----cHH
Confidence 4556777788999999998888742 12235566777662200 11 112222 220
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCce-EEEeecCCcchHHHHHHHHHHhcCCE
Q psy15244 814 KKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNIL-IHVHTHDMAGTGVATTLACVKAGADI 892 (1427)
Q Consensus 814 ~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ip-i~~H~Hnd~GlA~An~laAi~AGad~ 892 (1427)
..+.. .+.++.+.++|+|.+.+.|-. +++..+++..+++. ++. +.+-.+++.-- ....++....|.-.
T Consensus 107 -~~~g~---~~~~~~~~~aGadgii~~d~~----~e~~~~~~~~~~~~--g~~~i~l~~p~t~~~-~i~~i~~~~~g~v~ 175 (268)
T 1qop_A 107 -FNNGI---DAFYARCEQVGVDSVLVADVP----VEESAPFRQAALRH--NIAPIFICPPNADDD-LLRQVASYGRGYTY 175 (268)
T ss_dssp -HTTCH---HHHHHHHHHHTCCEEEETTCC----GGGCHHHHHHHHHT--TCEEECEECTTCCHH-HHHHHHHHCCSCEE
T ss_pred -HHhhH---HHHHHHHHHcCCCEEEEcCCC----HHHHHHHHHHHHHc--CCcEEEEECCCCCHH-HHHHHHhhCCCcEE
Confidence 01222 466777888999999998854 46688888888876 344 33444444332 22233333334322
Q ss_pred EEeccccCCCCC--CCCcHHHHHHHHHhC
Q psy15244 893 VDVAADSMSGIC--SQPAMGTIVSCLENT 919 (1427)
Q Consensus 893 VD~av~GmG~~t--gn~~lE~vv~~L~~~ 919 (1427)
-.|+.|.+|-. ..+++.+.+..++..
T Consensus 176 -~~s~~G~tG~~~~~~~~~~~~i~~lr~~ 203 (268)
T 1qop_A 176 -LLSRSGVTGAENRGALPLHHLIEKLKEY 203 (268)
T ss_dssp -EESSSSCCCSSSCC--CCHHHHHHHHHT
T ss_pred -EEecCCcCCCccCCCchHHHHHHHHHhc
Confidence 22666665431 123456677777754
No 288
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=84.86 E-value=3.7 Score=50.44 Aligned_cols=68 Identities=24% Similarity=0.319 Sum_probs=53.3
Q ss_pred HHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEe
Q psy15244 822 YEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 822 ~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~ 895 (1427)
..+.++.+.++|+|.|.|-..-| .+..+.++|+.+++.+|+++|....=.+ ...+..++++|||.|.+
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g--~~~~v~~~i~~i~~~~~~~~vi~g~v~t----~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHG--HSQGVIDKVKEVRAKYPSLNIIAGNVAT----AEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTTSEEEEEEECS----HHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHhhccceEEeccccc--chhhhhhHHHHHHHhCCCceEEeeeecc----HHHHHHHHHhCCCEEEE
Confidence 35668889999999999865544 4567888999999999888887643322 34568899999999997
No 289
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=84.65 E-value=15 Score=40.17 Aligned_cols=179 Identities=12% Similarity=0.160 Sum_probs=105.3
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCC--CCceeeeecccccccccC--CCcc
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIP--NIPFQMILRGNSLVGYSN--YSPA 753 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p--~~~~qml~Rg~n~vgy~~--~~~n 753 (1427)
.+.+|+.++++...+ -|+.++-+..+ | ++..+ .+. ++.+.. .+||.. .+..
T Consensus 26 ~t~~~i~~lc~eA~~--~~~~aVcV~p~--------------~--v~~a~-~l~~~~v~v~t------VigFP~G~~~~~ 80 (231)
T 3ndo_A 26 ATPSDVTALVDEAAD--LGVFAVCVSPP--------------L--VSVAA-GVAPSGLAIAA------VAGFPSGKHVPG 80 (231)
T ss_dssp CCHHHHHHHHHHHHH--HTCSEEEECGG--------------G--HHHHH-HHCCTTCEEEE------EESTTTCCSCHH
T ss_pred CCHHHHHHHHHHHHH--hCCcEEEECHH--------------H--HHHHH-HhcCCCCeEEE------EecCCCCCCcHH
Confidence 567888888887776 48888876532 1 11122 222 333333 234432 3344
Q ss_pred hHHHHHHHHHhcCCCEEEEeccCCh-----HHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHH
Q psy15244 754 EVGAFCRLASQAGIDIFRVFDPLNS-----VPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAK 827 (1427)
Q Consensus 754 vv~~~v~~a~~~Gid~~rif~~~nd-----~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~ 827 (1427)
+.-.-++.|++.|.|.+-+...... .+.+..-+..++++ +. ..+ -.|--++-+.+ ..+.+.....++
T Consensus 81 ~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~--~~l-KvIiEt~~L~~----~~t~eei~~a~~ 153 (231)
T 3ndo_A 81 IKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRA--ATL-KVIVESAALLE----FSGEPLLADVCR 153 (231)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT--SEE-EEECCHHHHHH----HTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccC--Cce-EEEEECcccCC----CCCHHHHHHHHH
Confidence 4555688899999999998877654 34444444444443 22 133 33333331111 148899999999
Q ss_pred HHHHCCCCEEEEcc--c-cCcCCHHHHHHHHHHHHHHcCCceEEEee--cCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 828 QLVESGAQVLCLKD--M-AGLLKPTAAKLLIGSFREKYPNILIHVHT--HDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 828 ~l~~~Gad~i~i~D--t-~G~l~P~~~~~lv~~lr~~~p~ipi~~H~--Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
.+.++|||-|--.= + .|..++++++.+-+.+. +.++|-.=. + | ...+++-++|||+.+=+|
T Consensus 154 ia~~aGADfVKTSTGf~~~~gAt~edv~lm~~~v~---~~v~VKaaGGIr-t----~~~a~~~i~aGa~RiGtS 219 (231)
T 3ndo_A 154 VARDAGADFVKTSTGFHPSGGASVQAVEIMARTVG---ERLGVKASGGIR-T----AEQAAAMLDAGATRLGLS 219 (231)
T ss_dssp HHHHTTCSEEECCCSCCTTCSCCHHHHHHHHHHHT---TTSEEEEESSCC-S----HHHHHHHHHTTCSEEEES
T ss_pred HHHHHCcCEEEcCCCCCCCCCCCHHHHHHHHHHhC---CCceEEEeCCCC-C----HHHHHHHHHhcchhcccc
Confidence 99999999875442 1 35567776665444433 234442221 2 1 267788889999998665
No 290
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=84.55 E-value=36 Score=37.57 Aligned_cols=201 Identities=11% Similarity=0.076 Sum_probs=109.4
Q ss_pred CeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceee
Q psy15244 658 HILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQM 737 (1427)
Q Consensus 658 ~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qm 737 (1427)
++-+...|+++ .+ ....++.+.+ .|++.||+|... + + +.++.+++.+....+..
T Consensus 27 klg~~~~~~~~---------~~---~~~~l~~~~~--~G~~~vEl~~~~-------~--~---~~~~~~~~~l~~~gl~v 80 (287)
T 3kws_A 27 KLSFQEGIAPG---------ES---LNEKLDFMEK--LGVVGFEPGGGG-------L--A---GRVNEIKQALNGRNIKV 80 (287)
T ss_dssp EEEEETTSSCC---------SS---HHHHHHHHHH--TTCCEEECBSTT-------C--G---GGHHHHHHHHTTSSCEE
T ss_pred eEEEEecccCC---------CC---HHHHHHHHHH--cCCCEEEecCCc-------h--H---HHHHHHHHHHHHcCCeE
Confidence 46666666665 12 3445555566 699999998641 1 1 23445555554444332
Q ss_pred --eecccccccccCCCc--------chHHHHHHHHHhcCCCEEEEecc---C-----Ch-------HHHHHHHHHHHHHh
Q psy15244 738 --ILRGNSLVGYSNYSP--------AEVGAFCRLASQAGIDIFRVFDP---L-----NS-------VPNLVKGMDAVQQV 792 (1427)
Q Consensus 738 --l~Rg~n~vgy~~~~~--------nvv~~~v~~a~~~Gid~~rif~~---~-----nd-------~~~~~~~i~~a~~~ 792 (1427)
+.-+ ..++-..++ +..+..++.|.+.|++.+.+... . +. ++.+....+.+++.
T Consensus 81 ~~~~~~--~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~ 158 (287)
T 3kws_A 81 SAICAG--FKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQH 158 (287)
T ss_dssp CEEECC--CCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecC--CCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 2211 001100122 24566788899999999988532 1 11 35677788888888
Q ss_pred cCCCcEEEEEEEeeccCCCC--CCCCCCHHHHHHHHHHHHHCCCCEEE-EccccCcCCHHHHHHHHHHHHHHcCCceEEE
Q psy15244 793 TGGSTIVEATICYAGDLTNP--NKKKYSLNYYEDLAKQLVESGAQVLC-LKDMAGLLKPTAAKLLIGSFREKYPNILIHV 869 (1427)
Q Consensus 793 G~~~~~v~~~i~~t~d~~~p--~~~~~~~~~~~~~a~~l~~~Gad~i~-i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~ 869 (1427)
|. . +++-- .++ ...-.+.+.+.++++.+ +.+.+. .-|+.=+..- -.++...+++.. +--.++
T Consensus 159 Gv---~----l~lE~--~~~~~~~~~~~~~~~~~ll~~v---~~~~vg~~~D~~h~~~~--g~d~~~~l~~~~-~~i~~v 223 (287)
T 3kws_A 159 GT---S----VIFEP--LNRKECFYLRQVADAASLCRDI---NNPGVRCMGDFWHMTWE--ETSDMGAFISGG-EYLQHV 223 (287)
T ss_dssp TC---C----EEECC--CCTTTCSSCCCHHHHHHHHHHH---CCTTEEEEEEHHHHHHH--CSCHHHHHHHHG-GGEEEE
T ss_pred CC---E----EEEEe--cCcccCcccCCHHHHHHHHHHc---CCCCeeEEeehHHHHhc--CCCHHHHHHHhh-hhEEEE
Confidence 87 2 22220 011 11135677777777665 433233 3465432210 012233333332 445689
Q ss_pred eecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCC--CcHHHHHHHHHhCCCCC
Q psy15244 870 HTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQ--PAMGTIVSCLENTDKRC 923 (1427)
Q Consensus 870 H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn--~~lE~vv~~L~~~g~~t 923 (1427)
|.+|..+- .. . +.|. .+...++..|+..|++-
T Consensus 224 HlkD~~~r------------------~~--p--G~G~d~id~~~i~~~L~~~gy~g 257 (287)
T 3kws_A 224 HVASRKRR------------------SM--P--GEDGDADNYINGFKGLKMIGYNN 257 (287)
T ss_dssp EECCTTTS------------------CS--T--TTTGGGCCCHHHHHHHHHTTCCS
T ss_pred EeCCCCCC------------------CC--C--CCCCCCcCHHHHHHHHHHcCCCc
Confidence 99997510 11 2 3577 88899999999887663
No 291
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=84.47 E-value=0.94 Score=46.54 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=44.7
Q ss_pred CCCeEEEEEEecCCCEEecCCEEEEEEcCCcee-eeecCCCeEEEEEEecCC
Q psy15244 1363 PMPGNIIEVKVKVGQQVKKNDVLIVMSVMKTET-LIHASADGVVKEIFVEVG 1413 (1427)
Q Consensus 1363 Pm~G~v~~v~V~~Gd~V~~G~~l~~ieamKme~-~i~Ap~~G~V~~i~v~~G 1413 (1427)
|..|..+-+.+.+|+.|.+|+.++-+.+-|-|. -|+||++|+|.-+.--++
T Consensus 106 paeG~~V~~i~~~G~rV~kgd~lA~i~T~KGEVR~i~spv~G~Vv~v~e~p~ 157 (169)
T 3d4r_A 106 PAEGYKVYPIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVIFMNEIPS 157 (169)
T ss_dssp EECSSEEEECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEEEEEEETT
T ss_pred EeCceEEEEEcCcCcEeccCCeEEEEEecCceEEEecCCCcEEEEEEEecCC
Confidence 667888888999999999999999999999887 699999999987764443
No 292
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=84.22 E-value=13 Score=39.67 Aligned_cols=160 Identities=11% Similarity=0.030 Sum_probs=96.9
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
.+.++..++++.+.+ .|+..|++.-. ..+..+.++.+++..+ .++.. |. |. ..++ .
T Consensus 16 ~d~~~~~~~~~~~~~--~G~~~i~l~~~----------~~~~~~~i~~i~~~~~-~~l~v---g~---g~--~~~~---~ 71 (212)
T 2v82_A 16 ITPDEALAHVGAVID--AGFDAVEIPLN----------SPQWEQSIPAIVDAYG-DKALI---GA---GT--VLKP---E 71 (212)
T ss_dssp CCHHHHHHHHHHHHH--HTCCEEEEETT----------STTHHHHHHHHHHHHT-TTSEE---EE---EC--CCSH---H
T ss_pred CCHHHHHHHHHHHHH--CCCCEEEEeCC----------ChhHHHHHHHHHHhCC-CCeEE---Ee---cc--ccCH---H
Confidence 456778888888877 69999987422 1233456677766543 33322 11 10 1112 3
Q ss_pred HHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q psy15244 758 FCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVL 837 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i 837 (1427)
.++.+.+.|.|.+.+ .. .+. ..++.+++.|. .+-.. .++++.. ..+.+.|+|.|
T Consensus 72 ~i~~a~~~Gad~V~~-~~-~~~----~~~~~~~~~g~---~~~~g-------------~~t~~e~----~~a~~~G~d~v 125 (212)
T 2v82_A 72 QVDALARMGCQLIVT-PN-IHS----EVIRRAVGYGM---TVCPG-------------CATATEA----FTALEAGAQAL 125 (212)
T ss_dssp HHHHHHHTTCCEEEC-SS-CCH----HHHHHHHHTTC---EEECE-------------ECSHHHH----HHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEe-CC-CCH----HHHHHHHHcCC---CEEee-------------cCCHHHH----HHHHHCCCCEE
Confidence 589999999999972 22 222 34566777887 33211 1444432 45567899999
Q ss_pred EEccccCcCCHHHHHHHHHHHHHHcC-CceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 838 CLKDMAGLLKPTAAKLLIGSFREKYP-NILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 838 ~i~Dt~G~l~P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
.+.-|. + ...+.++.+++.++ ++||..= -|....|..+++++||+.|-+.
T Consensus 126 ~v~~t~----~-~g~~~~~~l~~~~~~~ipvia~----GGI~~~~i~~~~~~Ga~gv~vG 176 (212)
T 2v82_A 126 KIFPSS----A-FGPQYIKALKAVLPSDIAVFAV----GGVTPENLAQWIDAGCAGAGLG 176 (212)
T ss_dssp EETTHH----H-HCHHHHHHHHTTSCTTCEEEEE----SSCCTTTHHHHHHHTCSEEEEC
T ss_pred EEecCC----C-CCHHHHHHHHHhccCCCeEEEe----CCCCHHHHHHHHHcCCCEEEEC
Confidence 874321 1 22466777777775 5887653 3555567788889999998654
No 293
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=84.05 E-value=8.2 Score=44.12 Aligned_cols=176 Identities=13% Similarity=0.091 Sum_probs=100.6
Q ss_pred HHHHHHHhCC-CCceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCC-------------hHHHHHHHHH
Q psy15244 722 RLAELRELIP-NIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLN-------------SVPNLVKGMD 787 (1427)
Q Consensus 722 rl~~lr~~~p-~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~n-------------d~~~~~~~i~ 787 (1427)
.++.++...+ +.++.. =+ -.||.+ |.|+. ..+++..+.|+.-+.|=|.+. +.+.+..-|+
T Consensus 77 ~~~~i~r~~~~~~Pvia--D~--d~Gyg~-~~~v~-~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~ 150 (307)
T 3lye_A 77 NADMIANLDPFGPPLIA--DM--DTGYGG-PIMVA-RTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIR 150 (307)
T ss_dssp HHHHHHTSSTTSCCEEE--EC--TTCSSS-HHHHH-HHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHH
T ss_pred HHHhhhccCCCCCcEEE--EC--CCCCCC-HHHHH-HHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHH
Confidence 3444544444 455332 22 236764 66644 468888899999999999875 3333333333
Q ss_pred HHH----HhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcC
Q psy15244 788 AVQ----QVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYP 863 (1427)
Q Consensus 788 ~a~----~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p 863 (1427)
+++ ..|.. ..+.+ -| | -.. ...++..++-++...++|||.|.+- |+-+++++.++++++.
T Consensus 151 Aa~~A~~~~~~d-~~I~A---RT-D---a~~-~~gldeAi~Ra~ay~eAGAD~ifi~---~~~~~~~~~~i~~~~~---- 214 (307)
T 3lye_A 151 AAVATKRRLRSD-FVLIA---RT-D---ALQ-SLGYEECIERLRAARDEGADVGLLE---GFRSKEQAAAAVAALA---- 214 (307)
T ss_dssp HHHHHHHHTTCC-CEEEE---EE-C---CHH-HHCHHHHHHHHHHHHHTTCSEEEEC---CCSCHHHHHHHHHHHT----
T ss_pred HHHHHHHhcCCC-eEEEE---ec-h---hhh-ccCHHHHHHHHHHHHHCCCCEEEec---CCCCHHHHHHHHHHcc----
Confidence 333 33431 12222 12 1 111 2467888999999999999999986 6778888888777764
Q ss_pred CceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCC
Q psy15244 864 NILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDK 921 (1427)
Q Consensus 864 ~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~ 921 (1427)
++|+-+-.-...+.-.-+.-.-.+.|+++|-.... .-++...++...+..|+..|.
T Consensus 215 ~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~--~~raa~~a~~~~~~~l~~~g~ 270 (307)
T 3lye_A 215 PWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFA--TLAPAYAAIRETLVRLRDHGV 270 (307)
T ss_dssp TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETT--THHHHHHHHHHHHHHHHHHSC
T ss_pred CCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChH--HHHHHHHHHHHHHHHHHHhCC
Confidence 35553322111111011234555679999944332 334455567777777765543
No 294
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=83.98 E-value=6.1 Score=44.48 Aligned_cols=93 Identities=13% Similarity=0.132 Sum_probs=57.3
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 56 TMEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 56 ~~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
|+++|||.| .|.++..+++.+.+.|++++++........ +..-.+.. .+.. .+.+.++.+ ++|+|
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~-------~Dl~-~~~~~~~~~--~~d~V 66 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA----INDYEYRV-------SDYT-LEDLINQLN--DVDAV 66 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEE-------CCCC-HHHHHHHTT--TCSEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc----CCceEEEE-------cccc-HHHHHHhhc--CCCEE
Confidence 467999999 799999999999999999988876533211 11111221 1234 556666655 79998
Q ss_pred EeCCCcccc---------c----HHHHHHHHHCCCc-eeCCC
Q psy15244 135 HPGYGFLSE---------R----EDFAKAVIGAGLE-FIGPA 162 (1427)
Q Consensus 135 ~pg~gflsE---------~----~~~a~~~e~~Gi~-fiGps 162 (1427)
+-..+.... | ..+.++|.+.|+. |+-.|
T Consensus 67 ih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~S 108 (311)
T 3m2p_A 67 VHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAS 108 (311)
T ss_dssp EECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 866443221 1 2456677777765 44333
No 295
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=83.96 E-value=0.71 Score=55.25 Aligned_cols=59 Identities=17% Similarity=0.253 Sum_probs=45.6
Q ss_pred EEEEEecCCCEEecCCEEEEEEc-CCceeeeecCCCeEEEEEEe-cCCCeeCCCCEEEEEe
Q psy15244 1368 IIEVKVKVGQQVKKNDVLIVMSV-MKTETLIHASADGVVKEIFV-EVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1368 v~~v~V~~Gd~V~~G~~l~~iea-mKme~~i~Ap~~G~V~~i~v-~~G~~V~~g~~L~~i~ 1426 (1427)
|....|+.|+....=.....+++ -.-+..|.++.+|+|.+++| ++||.|++||+|++|+
T Consensus 94 V~~~~v~~~~~~~~v~~~G~V~~~~~~~~~v~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld 154 (413)
T 3ne5_B 94 VKTATVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLT 154 (413)
T ss_dssp CCEEECEEECCEEEEEEEEEEEEEEEEEEEECCSSCEEEEEECSCCTTCEECTTCEEEEEE
T ss_pred ceEEEEEEeecceEEEEEEEEEECCCceEEEecccCEEEEEEEeCCCCCEEcCCCEEEEEc
Confidence 33455555555555555666665 34578899999999999998 9999999999999986
No 296
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=83.92 E-value=16 Score=42.44 Aligned_cols=129 Identities=19% Similarity=0.177 Sum_probs=80.5
Q ss_pred HHHHhcCCCEEEEeccC------------C------------hHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCC
Q psy15244 760 RLASQAGIDIFRVFDPL------------N------------SVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKK 815 (1427)
Q Consensus 760 ~~a~~~Gid~~rif~~~------------n------------d~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~ 815 (1427)
++|.++|.|.|.|-.+- | ..+-+.+.+++++++=.....+..-++-. |+. ..
T Consensus 159 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~-~~~---~~ 234 (349)
T 3hgj_A 159 RRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSAT-DWG---EG 234 (349)
T ss_dssp HHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESC-CCS---TT
T ss_pred HHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccc-ccc---CC
Confidence 44567899988887654 1 12335667788877632111233333322 121 12
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcc--ccCc----CCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhc
Q psy15244 816 KYSLNYYEDLAKQLVESGAQVLCLKD--MAGL----LKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 816 ~~~~~~~~~~a~~l~~~Gad~i~i~D--t~G~----l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AG 889 (1427)
.++.+...++++.+.++|+|.|.+.. +... ..|..-.++++.+|+.+ ++||-.-.-- .....+.+++++|
T Consensus 235 g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi---~t~e~a~~~l~~G 310 (349)
T 3hgj_A 235 GWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-GLRTGAVGLI---TTPEQAETLLQAG 310 (349)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-CCEEEECSSC---CCHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-CceEEEECCC---CCHHHHHHHHHCC
Confidence 57888999999999999999998864 1111 01222456788899888 7887653321 1256778899999
Q ss_pred -CCEEEec
Q psy15244 890 -ADIVDVA 896 (1427)
Q Consensus 890 -ad~VD~a 896 (1427)
||.|-..
T Consensus 311 ~aD~V~iG 318 (349)
T 3hgj_A 311 SADLVLLG 318 (349)
T ss_dssp SCSEEEES
T ss_pred CceEEEec
Confidence 9988544
No 297
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=83.68 E-value=3.2 Score=46.63 Aligned_cols=93 Identities=19% Similarity=0.265 Sum_probs=59.1
Q ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCcc-Cccc-----cc-cceEEEcCCCCCcccCCCCHHHHHHHHHh
Q psy15244 57 MEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKF-SAHR-----TK-VDQAFLVGKGMPPVAAYLNIPEIICIAKN 128 (1427)
Q Consensus 57 ~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~-s~~~-----~~-aDe~~~i~~~~~~~~~yldi~~Ii~ia~~ 128 (1427)
+++|||.| .|.++..+++++.+.|++++++..+.... .+.. .+ ......+ ..++.|.+.+.++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v------~~D~~d~~~l~~~~~- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV------HGSIDDHASLVEAVK- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEE------CCCTTCHHHHHHHHH-
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEE------EeccCCHHHHHHHHc-
Confidence 56899999 59999999999999999988876543211 0000 00 0111111 124567778877776
Q ss_pred cCCCEEEeCCCccc--ccHHHHHHHHHCC-Cc
Q psy15244 129 NNVDAIHPGYGFLS--EREDFAKAVIGAG-LE 157 (1427)
Q Consensus 129 ~~vDaI~pg~gfls--E~~~~a~~~e~~G-i~ 157 (1427)
++|+|+-..+... ....+.++|.+.| +.
T Consensus 77 -~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 77 -NVDVVISTVGSLQIESQVNIIKAIKEVGTVK 107 (308)
T ss_dssp -TCSEEEECCCGGGSGGGHHHHHHHHHHCCCS
T ss_pred -CCCEEEECCcchhhhhHHHHHHHHHhcCCCc
Confidence 5899987765421 2235777888877 64
No 298
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=83.67 E-value=0.22 Score=59.99 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=0.0
Q ss_pred CCceecCCCeEEEEEEecCCCEEecCCEEEEEEcCC
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKNDVLIVMSVMK 1392 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G~~l~~ieamK 1392 (1427)
...|.||..|+|.+++|++||.|..||+|++|+...
T Consensus 45 ~~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~~~ 80 (428)
T 3dva_I 45 VVEIPSPVKGKVLEILVPEGTVATVGQTLITLDAPG 80 (428)
T ss_dssp ------------------------------------
T ss_pred eEEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecCC
Confidence 457999999999999999999999999999998643
No 299
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=83.63 E-value=1.8 Score=48.45 Aligned_cols=165 Identities=22% Similarity=0.214 Sum_probs=91.1
Q ss_pred HHHHHhhcCCccEEeccCCCchhhhhhccccCh-HHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHHHHHhc
Q psy15244 687 SPFVANRFNNLYSLEMWGGAVSHTCLKFLKECP-WERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQA 765 (1427)
Q Consensus 687 a~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p-~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~ 765 (1427)
.+.|++ .|.+.||++.+ |. +| -..++.+-+.++......+ .|..||.+..+ ...|++.+.++
T Consensus 29 ~~~l~~--~Gad~ielg~p--------r~--~~~g~~~~~~~~~l~~~~~~~~---pn~~~~~~~~~--~~~f~~~a~~a 91 (264)
T 1xm3_A 29 KEAVAV--SESDILTFAVR--------RM--NIFEASQPNFLEQLDLSKYTLL---PNTAGASTAEE--AVRIARLAKAS 91 (264)
T ss_dssp HHHHHH--HTCSEEEEETT--------SS--TTC-------CTTCCGGGSEEE---EECTTCSSHHH--HHHHHHHHHHT
T ss_pred HHHHHH--cCCeEEEEccc--------cc--ccCCCCHHHHHHHHHhcCCeEc---CCccccCCHHH--HHHHHHHHHHc
Confidence 467887 69999999854 22 22 2233333333443332222 24555433222 22688888887
Q ss_pred CC-CEEEEeccCCh---HHHHHHHHHHHHHh---cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q psy15244 766 GI-DIFRVFDPLNS---VPNLVKGMDAVQQV---TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLC 838 (1427)
Q Consensus 766 Gi-d~~rif~~~nd---~~~~~~~i~~a~~~---G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~ 838 (1427)
|. +++.+-..... ++.+...++.+++. |+ .+- .++ . .+. +.++.+.++|++.|.
T Consensus 92 gg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~---~vi---~~~----~-----~~~----~~a~~~~~~gad~v~ 152 (264)
T 1xm3_A 92 GLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGF---IVL---PYT----S-----DDV----VLARKLEELGVHAIM 152 (264)
T ss_dssp TCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTC---CEE---EEE----C-----SCH----HHHHHHHHHTCSCBE
T ss_pred CCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCe---EEE---EEc----C-----CCH----HHHHHHHHhCCCEEE
Confidence 54 45544222221 34566777778887 87 432 233 1 233 346777888998762
Q ss_pred E-ccccC----cCCHHHHHHHHHHHHHHcCCceEEEeecCCcchH-HHHHHHHHHhcCCEEEec
Q psy15244 839 L-KDMAG----LLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTG-VATTLACVKAGADIVDVA 896 (1427)
Q Consensus 839 i-~Dt~G----~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA-~An~laAi~AGad~VD~a 896 (1427)
- .-..| ... .++++.+++.. ++|+-.- .|.. ..++.+++++|||.|=+.
T Consensus 153 ~~~~~~Gt~~~~~~----~~~l~~i~~~~-~iPviv~----gGI~t~eda~~~~~~GAdgViVG 207 (264)
T 1xm3_A 153 PGASPIGSGQGILN----PLNLSFIIEQA-KVPVIVD----AGIGSPKDAAYAMELGADGVLLN 207 (264)
T ss_dssp ECSSSTTCCCCCSC----HHHHHHHHHHC-SSCBEEE----SCCCSHHHHHHHHHTTCSEEEES
T ss_pred ECCcccCCCCCCCC----HHHHHHHHhcC-CCCEEEE----eCCCCHHHHHHHHHcCCCEEEEc
Confidence 2 11122 223 34677777765 8887665 3665 577888899999987544
No 300
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=83.59 E-value=1.9 Score=47.43 Aligned_cols=139 Identities=17% Similarity=0.167 Sum_probs=86.8
Q ss_pred HHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccC-ChHHHHHHHHHHHHHhcCCCcEE
Q psy15244 721 ERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPL-NSVPNLVKGMDAVQQVTGGSTIV 799 (1427)
Q Consensus 721 erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~-nd~~~~~~~i~~a~~~G~~~~~v 799 (1427)
+-++.+|+.. +.++-..+--. -|+ .+++.++++|.|.+.+-.-. ++ .+...++.+++.|. .+
T Consensus 47 ~~v~~lr~~~-~~~~dvhLmv~-------dp~----~~i~~~~~aGAd~itvh~Ea~~~--~~~~~i~~i~~~G~---k~ 109 (231)
T 3ctl_A 47 FFVSQVKKLA-TKPLDCHLMVT-------RPQ----DYIAQLARAGADFITLHPETING--QAFRLIDEIRRHDM---KV 109 (231)
T ss_dssp HHHHHHHTTC-CSCEEEEEESS-------CGG----GTHHHHHHHTCSEEEECGGGCTT--THHHHHHHHHHTTC---EE
T ss_pred HHHHHHHhcc-CCcEEEEEEec-------CHH----HHHHHHHHcCCCEEEECcccCCc--cHHHHHHHHHHcCC---eE
Confidence 4677787763 55555544322 233 35778888999998776554 42 46788999999999 66
Q ss_pred EEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEc----cccCcCCHHHHHHHHHHHHHHcC----CceEEEee
Q psy15244 800 EATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLK----DMAGLLKPTAAKLLIGSFREKYP----NILIHVHT 871 (1427)
Q Consensus 800 ~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~----Dt~G~l~P~~~~~lv~~lr~~~p----~ipi~~H~ 871 (1427)
...+ +|. ++.+.+..+ .+ ++|.+.+- -..|-.......+.|+.+|+..+ +++|.+
T Consensus 110 gv~l-------np~---tp~~~~~~~----l~-~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~V-- 172 (231)
T 3ctl_A 110 GLIL-------NPE---TPVEAMKYY----IH-KADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEV-- 172 (231)
T ss_dssp EEEE-------CTT---CCGGGGTTT----GG-GCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEE--
T ss_pred EEEE-------ECC---CcHHHHHHH----Hh-cCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEE--
Confidence 5554 332 223333222 22 68877652 12232223345566666766542 567776
Q ss_pred cCCcchHHHHHHHHHHhcCCEEEe
Q psy15244 872 HDMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 872 Hnd~GlA~An~laAi~AGad~VD~ 895 (1427)
|-|....|.-.+++||||++=+
T Consensus 173 --dGGI~~~~~~~~~~aGAd~~V~ 194 (231)
T 3ctl_A 173 --DGSCNQATYEKLMAAGADVFIV 194 (231)
T ss_dssp --ESCCSTTTHHHHHHHTCCEEEE
T ss_pred --ECCcCHHHHHHHHHcCCCEEEE
Confidence 6687788889999999998743
No 301
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=83.56 E-value=8.5 Score=42.18 Aligned_cols=194 Identities=10% Similarity=0.016 Sum_probs=106.3
Q ss_pred HHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHHHH
Q psy15244 683 LKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLA 762 (1427)
Q Consensus 683 ~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a 762 (1427)
....++.+.+ .|++.||+|..- + . ...+ -+.++.+++.+....+....=+. .+. ...+..+..++.|
T Consensus 32 ~~~~l~~~~~--~G~~~vEl~~~~-~----~-~~~~-~~~~~~~~~~l~~~gl~i~~~~~---~~~-~~~~~~~~~i~~A 98 (257)
T 3lmz_A 32 LDTTLKTLER--LDIHYLCIKDFH-L----P-LNST-DEQIRAFHDKCAAHKVTGYAVGP---IYM-KSEEEIDRAFDYA 98 (257)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTT-S----C-TTCC-HHHHHHHHHHHHHTTCEEEEEEE---EEE-CSHHHHHHHHHHH
T ss_pred HHHHHHHHHH--hCCCEEEEeccc-C----C-CCCC-HHHHHHHHHHHHHcCCeEEEEec---ccc-CCHHHHHHHHHHH
Confidence 4455556666 699999998641 1 0 0112 23344555444333333221110 011 2234567789999
Q ss_pred HhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEcc
Q psy15244 763 SQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNP-NKKKYSLNYYEDLAKQLVESGAQVLCLKD 841 (1427)
Q Consensus 763 ~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p-~~~~~~~~~~~~~a~~l~~~Gad~i~i~D 841 (1427)
.+.|++.+++.-. .+.++...+.+++.|. .+ ++... +| ...-.+.+.+.++++. .+...=..-|
T Consensus 99 ~~lGa~~v~~~p~---~~~l~~l~~~a~~~gv---~l--~lEn~----~~~~~~~~~~~~~~~ll~~---~~p~vg~~~D 163 (257)
T 3lmz_A 99 KRVGVKLIVGVPN---YELLPYVDKKVKEYDF---HY--AIHLH----GPDIKTYPDATDVWVHTKD---LDPRIGMCLD 163 (257)
T ss_dssp HHHTCSEEEEEEC---GGGHHHHHHHHHHHTC---EE--EEECC----CTTCSSSCSHHHHHHHHTT---SCTTEEEEEE
T ss_pred HHhCCCEEEecCC---HHHHHHHHHHHHHcCC---EE--EEecC----CCcccccCCHHHHHHHHHh---CCCCccEEEc
Confidence 9999999998643 4678888899999998 32 22211 12 1123577777777652 2333333456
Q ss_pred ccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCC
Q psy15244 842 MAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDK 921 (1427)
Q Consensus 842 t~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~ 921 (1427)
+.=+..-. .+....+++.. +--.++|.||..+- +-.. ....+| .|.-+...++..|+..|+
T Consensus 164 ~~h~~~~g--~d~~~~l~~~~-~~i~~vHl~D~~~~-----------~~~~---~~~~~G--~G~id~~~~~~~L~~~gy 224 (257)
T 3lmz_A 164 VGHDLRNG--CDPVADLKKYH-TRVFDMHIKDVTDS-----------SKAG---VGIEIG--RGKIDFPALIRMMREVNY 224 (257)
T ss_dssp HHHHHHTT--CCHHHHHHHHG-GGEEEEEECEESCS-----------STTC---CEECTT--SSSCCHHHHHHHHHHTTC
T ss_pred hhhHHHcC--CCHHHHHHHhh-cceeEEeecccccc-----------cCCC---CccccC--CCccCHHHHHHHHHHcCC
Confidence 54322100 01223333332 44568999998762 1111 111233 477899999999998876
Q ss_pred CC
Q psy15244 922 RC 923 (1427)
Q Consensus 922 ~t 923 (1427)
+-
T Consensus 225 ~g 226 (257)
T 3lmz_A 225 TG 226 (257)
T ss_dssp CS
T ss_pred Cc
Confidence 53
No 302
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=83.50 E-value=5.2 Score=45.54 Aligned_cols=160 Identities=18% Similarity=0.174 Sum_probs=77.8
Q ss_pred ceeEeecccccccchhhhhccccc-----------------cccccccccccc--ccccccc-CCCeEEeecCcccCCCC
Q psy15244 613 KHVLLTDTTFRDAHQSLLATRVRT-----------------YDLKKVMMGAGE--FVNSVRK-LKHILLTDTTFRDAHQS 672 (1427)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~dl~~~~~~~~~--~~~~~~~-~~~v~i~DtTlRDG~Qs 672 (1427)
+.+.|.|||.||+.|+. ....++ +++..+..+|.. +++.+.+ .+++.+.
T Consensus 4 ~~v~I~DttlRDG~Q~~-~~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~---------- 72 (293)
T 3ewb_X 4 KKIQFFDTTLRDGEQTP-GVNFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKHCSVT---------- 72 (293)
T ss_dssp EEEEEEECTTTCCC------CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCSSEEE----------
T ss_pred CeeEEEECCCCCcCcCC-CCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcCCCEEE----------
Confidence 56899999999999987 333333 333333333321 1222211 1122211
Q ss_pred CCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhh-ccccChHHHHHHHHHh---CCC--Cceeeeeccccccc
Q psy15244 673 LLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLK-FLKECPWERLAELREL---IPN--IPFQMILRGNSLVG 746 (1427)
Q Consensus 673 l~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~r-fl~e~p~erl~~lr~~---~p~--~~~qml~Rg~n~vg 746 (1427)
.+ .|-+..|+...++.+.. +|+..|-+..++ .|.=.+ -++-+.-+-++.+++. ... ...+.-+ --+
T Consensus 73 ~l-~~~~~~di~~a~~~~~~--ag~~~v~i~~~~-Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~----~d~ 144 (293)
T 3ewb_X 73 GL-ARCVEGDIDRAEEALKD--AVSPQIHIFLAT-SDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSP----EDA 144 (293)
T ss_dssp EE-EESSHHHHHHHHHHHTT--CSSEEEEEEEEC-SHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEE----ETG
T ss_pred EE-ecCCHHHHHHHHHHHhh--cCCCEEEEEecC-cHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEe----ccC
Confidence 12 23345666666666665 688877765433 222111 1233443333333322 211 1111100 001
Q ss_pred ccCCCcchHHHHHHHHHhcCCCEEEEeccCC--hHHHHHHHHHHHHHh
Q psy15244 747 YSNYSPAEVGAFCRLASQAGIDIFRVFDPLN--SVPNLVKGMDAVQQV 792 (1427)
Q Consensus 747 y~~~~~nvv~~~v~~a~~~Gid~~rif~~~n--d~~~~~~~i~~a~~~ 792 (1427)
+ ..+.+.+.+.++++.+.|++.|.+.|..- ....+...++.+++.
T Consensus 145 ~-~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~ 191 (293)
T 3ewb_X 145 T-RSDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRRE 191 (293)
T ss_dssp G-GSCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHh
Confidence 1 23445566678888889999999988776 345666666666654
No 303
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=83.43 E-value=4 Score=45.88 Aligned_cols=93 Identities=16% Similarity=0.171 Sum_probs=59.3
Q ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCccc-----cc-cceEEEcCCCCCcccCCCCHHHHHHHHHhc
Q psy15244 57 MEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHR-----TK-VDQAFLVGKGMPPVAAYLNIPEIICIAKNN 129 (1427)
Q Consensus 57 ~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~-----~~-aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~ 129 (1427)
+++|||.| .|.++..+++.+.+.|++++++..+.....+.. .+ ......+ ..++.|.+.+.++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~------~~D~~d~~~l~~~~~-- 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI------EASLDDHQRLVDALK-- 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEE------CCCSSCHHHHHHHHT--
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEE------eCCCCCHHHHHHHHh--
Confidence 56899999 599999999999999999888765533210100 00 1111111 124567778777765
Q ss_pred CCCEEEeCCCccc------ccHHHHHHHHHCC-Cc
Q psy15244 130 NVDAIHPGYGFLS------EREDFAKAVIGAG-LE 157 (1427)
Q Consensus 130 ~vDaI~pg~gfls------E~~~~a~~~e~~G-i~ 157 (1427)
++|+|+-..+... ....+.++|.+.| +.
T Consensus 76 ~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 76 QVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIK 110 (313)
T ss_dssp TCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCS
T ss_pred CCCEEEECCccccchhhHHHHHHHHHHHHhcCCCc
Confidence 5999887655431 1135678888888 64
No 304
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=83.34 E-value=2.5 Score=42.76 Aligned_cols=90 Identities=12% Similarity=0.039 Sum_probs=54.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCC-Ccc-Cccccc-cceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCE
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGIKSVGIYSEQ-DKF-SAHRTK-VDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDA 133 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi~~vav~s~~-d~~-s~~~~~-aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDa 133 (1427)
.++|+|+|.|.++.++++.+.+.|+++++++.++ +.. ...... .+..+..+ +..+.+.+ +-+.-.++|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~g-------d~~~~~~l-~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPG-------DSNDSSVL-KKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEES-------CTTSHHHH-HHHTTTTCSE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEc-------CCCCHHHH-HHcChhhCCE
Confidence 4589999999999999999999999999997653 110 000001 11222322 12344443 3343457899
Q ss_pred EEeCCCcccccHHHHHHHHHC
Q psy15244 134 IHPGYGFLSEREDFAKAVIGA 154 (1427)
Q Consensus 134 I~pg~gflsE~~~~a~~~e~~ 154 (1427)
|+...+....|...+..+.+.
T Consensus 75 vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 75 ILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp EEECSSCHHHHHHHHHHHHHH
T ss_pred EEEecCChHHHHHHHHHHHHH
Confidence 998876544555455555443
No 305
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=83.29 E-value=4.4 Score=49.52 Aligned_cols=68 Identities=19% Similarity=0.232 Sum_probs=52.0
Q ss_pred HHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEe
Q psy15244 822 YEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 822 ~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~ 895 (1427)
..+.++.+.++|+|.|.|- ++. ..+....++|+.+|+.+|++||..-. ......+.+++++|||.|.+
T Consensus 230 ~~~~a~~l~~aG~d~I~id-~a~-g~~~~~~~~v~~i~~~~p~~~Vi~g~----v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVD-TAH-GHSKGVIERVRWVKQTFPDVQVIGGN----IATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEE-CSC-CSBHHHHHHHHHHHHHCTTSEEEEEE----ECSHHHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHhhcccceEEec-ccC-CcchhHHHHHHHHHHHCCCceEEEee----eCcHHHHHHHHHcCCCEEEE
Confidence 4567889999999998883 332 34567889999999999999987621 12245568899999999987
No 306
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=83.26 E-value=0.2 Score=58.77 Aligned_cols=55 Identities=24% Similarity=0.353 Sum_probs=42.5
Q ss_pred EEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEEecCCCeeCCCCEEEEEe
Q psy15244 1371 VKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIFVEVGGQVAQNDLVVVLD 1426 (1427)
Q Consensus 1371 v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~L~~i~ 1426 (1427)
..|+.|+....=..-..+++- -+..|.++.+|+|.+++|++|+.|++||+|++|+
T Consensus 10 ~~v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld 64 (369)
T 4dk0_A 10 EEVKRGNIEKNVVATGSIESI-NTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEID 64 (369)
T ss_dssp CCCCEECCCCCCEEEEEEECS-SCCCBCCCSCSBCCEECCCTTSCCCSSCCCEECC
T ss_pred EEEEecceeEEEEEeEEEEee-eeEEEecCCCcEEEEEEECCCCEECCCCEEEEEc
Confidence 344455544444455666654 4668999999999999999999999999999885
No 307
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=83.09 E-value=10 Score=43.24 Aligned_cols=100 Identities=16% Similarity=0.154 Sum_probs=82.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccCc---CCHHHHHHHHHHHHHHc-CCceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAGL---LKPTAAKLLIGSFREKY-PNILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~---l~P~~~~~lv~~lr~~~-p~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+|= |+.++-.++++...+.. +.+||-.|+ +++..-++..+..|.++|
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 110 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEG 110 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 3699999999999999999999999999995 67888889999888876 368998887 788899999999999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHHh
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLEN 918 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~~ 918 (1427)
||.+=+..--.- .|+-+.++..++.
T Consensus 111 adavlv~~P~y~----~~s~~~l~~~f~~ 135 (304)
T 3l21_A 111 AHGLLVVTPYYS----KPPQRGLQAHFTA 135 (304)
T ss_dssp CSEEEEECCCSS----CCCHHHHHHHHHH
T ss_pred CCEEEECCCCCC----CCCHHHHHHHHHH
Confidence 999876543332 2456777776653
No 308
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=83.01 E-value=6.5 Score=45.05 Aligned_cols=162 Identities=12% Similarity=-0.006 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHCCCCEEEEccccC-----cCCHHHHHHHHHHHHHHcCCceEEE-eecCCcchHHHHHHHHHHhcCC--
Q psy15244 820 NYYEDLAKQLVESGAQVLCLKDMAG-----LLKPTAAKLLIGSFREKYPNILIHV-HTHDMAGTGVATTLACVKAGAD-- 891 (1427)
Q Consensus 820 ~~~~~~a~~l~~~Gad~i~i~Dt~G-----~l~P~~~~~lv~~lr~~~p~ipi~~-H~Hnd~GlA~An~laAi~AGad-- 891 (1427)
++.++.+++.++.|||+|.|.=..+ -..|++..++|+.+++.+ ++||.+ -|-|. -.-...+-+|+++|++
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~-~vplsI~DT~~~-~~~~~V~eaal~aga~~k 151 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI-DVPLMIIGCGVE-EKDAEIFPVIGEALSGRN 151 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-SSCEEEECCSCH-HHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC-CceEEEECCCCC-CCCHHHHHHHHHhCCCCC
Confidence 5788999999999999999976321 134567788999999998 999988 66221 1224667799999998
Q ss_pred -EEEeccccCCCCCCCCcHHHHHHHHHhCCCC----CCCChhhHHHHHHHHHHHhCCCCCCCC----cccccchhhhhHH
Q psy15244 892 -IVDVAADSMSGICSQPAMGTIVSCLENTDKR----CGIDLHDVCDYSSYWRKVRELYAPAHN----LLWRCGIDLHDVC 962 (1427)
Q Consensus 892 -~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~----tgidl~~L~~l~~~v~~~~g~~~~~~k----pivG~~~f~~~~~ 962 (1427)
+|+....+ ..+.++.....+|.. +.-|+ ..+.+.++.....-+++.+ |.+|. |.....
T Consensus 152 ~iINdvs~~--------~~~~~~~~aa~~g~~vv~m~~~dv---~~l~~~~~~a~~~Gi~~e~IilDPg~g~--~g~~~e 218 (310)
T 2h9a_B 152 CLLSSATKD--------NYKPIVATCMVHGHSVVASAPLDI---NLSKQLNIMIMEMNLAPNRIIMDPLIGA--LGYGIE 218 (310)
T ss_dssp CEEEEECTT--------THHHHHHHHHHHTCEEEEECSSCH---HHHHHHHHHHHTTTCCGGGEEEECCCCC--TTTTHH
T ss_pred CEEEECCCC--------ccHHHHHHHHHhCCCEEEEChhHH---HHHHHHHHHHHHCCCChhhEEEeCCCcc--ccCchH
Confidence 77654321 255666655554432 21144 3444555566666666665 55442 221111
Q ss_pred HHHHHHHHhhh----hcCCCCCCCCCcCccc------EEEecCC
Q psy15244 963 DYSSYWRKVRE----LYAPFECTDLKAASSE------AYLYEIP 996 (1427)
Q Consensus 963 ~~~~~~~~~~~----~Y~~f~~~~~~g~~~~------v~~~~~p 996 (1427)
.-.+-++..|. ....+..|-+.|.++. -.+++.+
T Consensus 219 ~~~~~l~~ir~~al~~~~~lg~P~l~g~SrK~~~~~es~i~~~~ 262 (310)
T 2h9a_B 219 YSYSIIERMRLGALTGDKILAMPVVCFIGQEAWKAKEAKDPEVA 262 (310)
T ss_dssp HHHHHHHHHHHHHHTTCGGGCSCBEECHHHHHTTSHHHHCSCCG
T ss_pred hHHHHHHHHHHhhhhhhhcCCCCEEEEccCcccccccchhhhcc
Confidence 11133333333 2445555777777766 5556654
No 309
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=82.94 E-value=5.8 Score=47.13 Aligned_cols=68 Identities=25% Similarity=0.343 Sum_probs=53.2
Q ss_pred HHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEE-eecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 822 YEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHV-HTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 822 ~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~-H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
..+.++.+.++|+|.|.| ++. ...|....++++.+|+.+|++||.+ ..++ ..-+..|.++|||.|.++
T Consensus 154 ~~~~a~~~~~~G~d~i~i-~~~-~g~~~~~~e~i~~ir~~~~~~pviv~~v~~-----~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 154 TIERVEELVKAHVDILVI-DSA-HGHSTRIIELIKKIKTKYPNLDLIAGNIVT-----KEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHHTTCSEEEE-CCS-CCSSHHHHHHHHHHHHHCTTCEEEEEEECS-----HHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHHCCCCEEEE-eCC-CCChHHHHHHHHHHHHHCCCCeEEEcCCCc-----HHHHHHHHhcCCCEEEEC
Confidence 356677888999999988 432 3467888999999999998899886 3332 456678889999999884
No 310
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=82.93 E-value=25 Score=39.00 Aligned_cols=198 Identities=13% Similarity=0.044 Sum_probs=102.8
Q ss_pred HHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeee-cccc-cccccCCCc--------
Q psy15244 683 LKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMIL-RGNS-LVGYSNYSP-------- 752 (1427)
Q Consensus 683 ~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~-Rg~n-~vgy~~~~~-------- 752 (1427)
....++.+.+ .|++.||++... + ..+.+ +.++.+++.+....+.... -+.. ...+.. ++
T Consensus 19 ~~~~l~~~~~--~G~~~vEl~~~~-~----~~~~~---~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~-~d~~~r~~~~ 87 (294)
T 3vni_A 19 YKYYIEKVAK--LGFDILEIAASP-L----PFYSD---IQINELKACAHGNGITLTVGHGPSAEQNLSS-PDPDIRKNAK 87 (294)
T ss_dssp HHHHHHHHHH--HTCSEEEEESTT-G----GGCCH---HHHHHHHHHHHHTTCEEEEEECCCGGGCTTC-SCHHHHHHHH
T ss_pred HHHHHHHHHH--cCCCEEEecCcc-c----CCcCH---HHHHHHHHHHHHcCCeEEEeecCCCCcCCCC-CCHHHHHHHH
Confidence 4455555566 599999998642 1 11122 3344444444333333221 1110 001111 12
Q ss_pred chHHHHHHHHHhcCCCEEEEec-c---------CCh-------HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCC
Q psy15244 753 AEVGAFCRLASQAGIDIFRVFD-P---------LNS-------VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKK 815 (1427)
Q Consensus 753 nvv~~~v~~a~~~Gid~~rif~-~---------~nd-------~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~ 815 (1427)
+..+..++.|.+.|++.+++.. + .+. ++.+....+.+++.|. .+ ++..... .+...
T Consensus 88 ~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv---~l--~lEn~~~--~~~~~ 160 (294)
T 3vni_A 88 AFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGV---DF--CLEVLNR--FENYL 160 (294)
T ss_dssp HHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTC---EE--EEECCCT--TTCSS
T ss_pred HHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC---EE--EEEecCc--ccCcc
Confidence 2345578889999999998532 1 111 2456777788888887 32 2222110 11112
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEE-EccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEE
Q psy15244 816 KYSLNYYEDLAKQLVESGAQVLC-LKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVD 894 (1427)
Q Consensus 816 ~~~~~~~~~~a~~l~~~Gad~i~-i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD 894 (1427)
-.+.+.+.++++.+ +.+.+. .-|+.=...-. .+....+++.. +--.++|.||...
T Consensus 161 ~~~~~~~~~l~~~v---~~~~vg~~~D~~h~~~~g--~d~~~~l~~~~-~~i~~vHl~D~~r------------------ 216 (294)
T 3vni_A 161 INTAQEGVDFVKQV---DHNNVKVMLDTFHMNIEE--DSIGGAIRTAG-SYLGHLHTGECNR------------------ 216 (294)
T ss_dssp CCSHHHHHHHHHHH---CCTTEEEEEEHHHHHHHC--SCHHHHHHHHG-GGEEEEEECCTTS------------------
T ss_pred cCCHHHHHHHHHHc---CCCCEEEEEEhhhhHHcC--CCHHHHHHHhh-hhEeEEEeCCCCC------------------
Confidence 35777777777765 333233 33653322110 12233333332 4456899999521
Q ss_pred eccccCCCCCCCCcHHHHHHHHHhCCCCCCCCh
Q psy15244 895 VAADSMSGICSQPAMGTIVSCLENTDKRCGIDL 927 (1427)
Q Consensus 895 ~av~GmG~~tgn~~lE~vv~~L~~~g~~tgidl 927 (1427)
... +.|..+...++..|+..|++-.+-+
T Consensus 217 -~~p----G~G~id~~~~~~~L~~~gy~g~~~l 244 (294)
T 3vni_A 217 -KVP----GRGRIPWVEIGEALADIGYNGSVVM 244 (294)
T ss_dssp -CCT----TSSSCCHHHHHHHHHHTTCCSCEEE
T ss_pred -CCC----CCCCcCHHHHHHHHHHhCCCCcEEE
Confidence 111 3678899999999999887644434
No 311
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=82.90 E-value=15 Score=44.39 Aligned_cols=150 Identities=14% Similarity=0.138 Sum_probs=89.3
Q ss_pred HHHHHHHHHhcCCCEEEEec-----------cCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFD-----------PLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYE 823 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~-----------~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~ 823 (1427)
.-..++...+.|++.+-+.. +-++.+.++...+... +. ...+ ++-.-++ .....|..+-..
T Consensus 32 kl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~--~~---~l~~-l~R~~N~--~G~~~~~ddv~~ 103 (464)
T 2nx9_A 32 MLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMP--NT---PLQM-LLRGQNL--LGYRHYADDVVD 103 (464)
T ss_dssp TGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCS--SS---CEEE-EECGGGT--TSSSCCCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCC--CC---eEEE-Eeccccc--cCcccccchhhH
Confidence 34456777889999999954 2334444444333211 11 2222 2211010 011135666677
Q ss_pred HHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCC------cchHHHHHHHHHHhcCCEEEecc
Q psy15244 824 DLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDM------AGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 824 ~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd------~GlA~An~laAi~AGad~VD~av 897 (1427)
..++.+.++|++.|+|.|.+--. ..+.+.|+.+|+. +..+.+..|.+ ....+..+-++.++||++|..
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd~--~ni~~~i~~ak~~--G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l-- 177 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMNDV--RNMQQALQAVKKM--GAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIAL-- 177 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHT--TCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEE--
T ss_pred HHHHHHHhCCcCEEEEEEecCHH--HHHHHHHHHHHHC--CCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEE--
Confidence 78889999999999999876544 6788888988876 45665555543 344456667788999998743
Q ss_pred ccCCCCCCCCcHHHHHHHHHh
Q psy15244 898 DSMSGICSQPAMGTIVSCLEN 918 (1427)
Q Consensus 898 ~GmG~~tgn~~lE~vv~~L~~ 918 (1427)
.-+.|..---...+++..|+.
T Consensus 178 ~DT~G~~~P~~v~~lv~~l~~ 198 (464)
T 2nx9_A 178 KDMAGILTPYAAEELVSTLKK 198 (464)
T ss_dssp EETTSCCCHHHHHHHHHHHHH
T ss_pred cCCCCCcCHHHHHHHHHHHHH
Confidence 333332222245666766654
No 312
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=82.75 E-value=4 Score=45.26 Aligned_cols=132 Identities=19% Similarity=0.271 Sum_probs=80.2
Q ss_pred HHHHHh--cCCCEEEEecc------CChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHH
Q psy15244 759 CRLASQ--AGIDIFRVFDP------LNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLV 830 (1427)
Q Consensus 759 v~~a~~--~Gid~~rif~~------~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~ 830 (1427)
.+.|.+ .|.++|.+-.. +.|+....++.+...+.|+ .+ +.|+.| +| .+++.++
T Consensus 93 a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf---~V---lpy~~d--d~-----------~~akrl~ 153 (265)
T 1wv2_A 93 CRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGF---DV---MVYTSD--DP-----------IIARQLA 153 (265)
T ss_dssp HHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTC---EE---EEEECS--CH-----------HHHHHHH
T ss_pred HHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCC---EE---EEEeCC--CH-----------HHHHHHH
Confidence 344444 48889988877 3466666667777777798 43 334422 33 6899999
Q ss_pred HCCCCEEEEccc-cCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHH-HHHHHHHHhcCCEEEeccccCCCCCCCCc
Q psy15244 831 ESGAQVLCLKDM-AGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGV-ATTLACVKAGADIVDVAADSMSGICSQPA 908 (1427)
Q Consensus 831 ~~Gad~i~i~Dt-~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~-An~laAi~AGad~VD~av~GmG~~tgn~~ 908 (1427)
++|++.+----. .|....-.-.++|+.+++.. ++||-. +-|.+. +-+-.|++.|||.|=+.. ++- ++.+|.
T Consensus 154 ~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~-~vPVI~----eGGI~TPsDAa~AmeLGAdgVlVgS-AI~-~a~dP~ 226 (265)
T 1wv2_A 154 EIGCIAVMPLAGLIGSGLGICNPYNLRIILEEA-KVPVLV----DAGVGTASDAAIAMELGCEAVLMNT-AIA-HAKDPV 226 (265)
T ss_dssp HSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHC-SSCBEE----ESCCCSHHHHHHHHHHTCSEEEESH-HHH-TSSSHH
T ss_pred HhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcC-CCCEEE----eCCCCCHHHHHHHHHcCCCEEEECh-HHh-CCCCHH
Confidence 999998843122 23322212255677788764 888766 445444 456788999999864332 111 455665
Q ss_pred --HHHHHHHH
Q psy15244 909 --MGTIVSCL 916 (1427)
Q Consensus 909 --lE~vv~~L 916 (1427)
++.++.++
T Consensus 227 ~ma~af~~Av 236 (265)
T 1wv2_A 227 MMAEAMKHAI 236 (265)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 44445444
No 313
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=82.75 E-value=1.6 Score=47.01 Aligned_cols=87 Identities=15% Similarity=0.030 Sum_probs=55.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEeCC
Q psy15244 59 KILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHPGY 138 (1427)
Q Consensus 59 kVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~pg~ 138 (1427)
||+|+|.|.++..+++.+.+.|+++++++.+++.........+..+..+ +..+.+. ++-+.-.++|+|+...
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~g-------d~~~~~~-l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHG-------DGSHKEI-LRDAEVSKNDVVVILT 73 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEES-------CTTSHHH-HHHHTCCTTCEEEECC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEc-------CCCCHHH-HHhcCcccCCEEEEec
Confidence 7999999999999999999999999999876653221111112233333 1233333 4444445789999887
Q ss_pred CcccccHHHHHHHHH
Q psy15244 139 GFLSEREDFAKAVIG 153 (1427)
Q Consensus 139 gflsE~~~~a~~~e~ 153 (1427)
+....|...+..+..
T Consensus 74 ~~d~~n~~~~~~a~~ 88 (218)
T 3l4b_C 74 PRDEVNLFIAQLVMK 88 (218)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 655555544554444
No 314
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=82.61 E-value=10 Score=44.50 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=84.0
Q ss_pred chHHHHHHHH---HhcCCCEEEEeccC------------C------------hHHHHHHHHHHHHHhcCCCcEEEEEEEe
Q psy15244 753 AEVGAFCRLA---SQAGIDIFRVFDPL------------N------------SVPNLVKGMDAVQQVTGGSTIVEATICY 805 (1427)
Q Consensus 753 nvv~~~v~~a---~~~Gid~~rif~~~------------n------------d~~~~~~~i~~a~~~G~~~~~v~~~i~~ 805 (1427)
.+++.|++.| .++|.|.|.|-.+. | ..+-+.+.+++++++-... .+..-|+-
T Consensus 158 ~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-~v~vrls~ 236 (364)
T 1vyr_A 158 GIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD-RIGIRVSP 236 (364)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-GEEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-cEEEEEcc
Confidence 3455666654 77899999995532 1 1234556677777753211 22222222
Q ss_pred eccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcccc--C-cCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHH
Q psy15244 806 AGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMA--G-LLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATT 882 (1427)
Q Consensus 806 t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~--G-~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~ 882 (1427)
..++..-.....+.+.+.++++.++++|+|-|.+.... + -..| .++++.+|+.+ ++||-.-.-- ....+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~---~~~~~~v~~~~-~iPvi~~Ggi----t~~~a 308 (364)
T 1vyr_A 237 IGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYS---EAFRQKVRERF-HGVIIGAGAY----TAEKA 308 (364)
T ss_dssp SSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC---HHHHHHHHHHC-CSEEEEESSC----CHHHH
T ss_pred ccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCccc---HHHHHHHHHHC-CCCEEEECCc----CHHHH
Confidence 11111100124577889999999999999999886421 0 0112 34678889998 7887554322 36788
Q ss_pred HHHHHhc-CCEEEeccccC
Q psy15244 883 LACVKAG-ADIVDVAADSM 900 (1427)
Q Consensus 883 laAi~AG-ad~VD~av~Gm 900 (1427)
..++++| ||.|-.+=.-+
T Consensus 309 ~~~l~~g~aD~V~~gR~~l 327 (364)
T 1vyr_A 309 EDLIGKGLIDAVAFGRDYI 327 (364)
T ss_dssp HHHHHTTSCSEEEESHHHH
T ss_pred HHHHHCCCccEEEECHHHH
Confidence 8999998 99986554333
No 315
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=82.59 E-value=2.8 Score=46.69 Aligned_cols=61 Identities=10% Similarity=0.142 Sum_probs=47.4
Q ss_pred CC-EEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 57 ME-KILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 57 ~k-kVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
|+ ||||.| .|.++..+++.+.+.|++++++.... .+..|.+.+.++.+..++|+|
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------------------~D~~d~~~~~~~~~~~~~d~v 60 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL-----------------------LDITNISQVQQVVQEIRPHII 60 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT-----------------------SCTTCHHHHHHHHHHHCCSEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc-----------------------cCCCCHHHHHHHHHhcCCCEE
Confidence 45 999999 69999999999999999988775410 124567888888888789999
Q ss_pred EeCCCc
Q psy15244 135 HPGYGF 140 (1427)
Q Consensus 135 ~pg~gf 140 (1427)
+-.-+.
T Consensus 61 i~~a~~ 66 (287)
T 3sc6_A 61 IHCAAY 66 (287)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 866543
No 316
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=82.54 E-value=24 Score=39.82 Aligned_cols=148 Identities=15% Similarity=0.112 Sum_probs=90.8
Q ss_pred cchHHHHHHHHH-hcCCCEEEEeccCChHHHHHHHHHHHHHh-----cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHH
Q psy15244 752 PAEVGAFCRLAS-QAGIDIFRVFDPLNSVPNLVKGMDAVQQV-----TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDL 825 (1427)
Q Consensus 752 ~nvv~~~v~~a~-~~Gid~~rif~~~nd~~~~~~~i~~a~~~-----G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~ 825 (1427)
+..+.+.+++|. +.++..+-| ..+++...+ +..+.. +. .+ |.. ++-|.. ..+.+--+.-
T Consensus 41 ~e~I~~lc~eA~~~~~~aaVCV--~P~~V~~a~---~~L~~~~~~~s~v---~V----~tV--igFP~G-~~~~e~K~~E 105 (297)
T 4eiv_A 41 NESVAAVCKIAAKDPAIVGVSV--RPAFVRFIR---QELVKSAPEVAGI---KV----CAA--VNFPEG-TGTPDTVSLE 105 (297)
T ss_dssp HHHHHHHHHHHHSSSCCSEEEE--CGGGHHHHH---HTGGGTCGGGGGS---EE----EEE--ESTTTC-CCCHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCcEEEEE--CHHHHHHHH---HHhcccCcCCCCC---eE----EEE--ecCCCC-CCCHHHHHHH
Confidence 344777889998 777655544 344554433 333332 23 33 222 135643 5667766667
Q ss_pred HHHHHHCCCCEEEEccccCcCCH------HHHHHHHHHHHHHcCCce--EEEeec--CCcchHHHHHHHHHHhcCCEEEe
Q psy15244 826 AKQLVESGAQVLCLKDMAGLLKP------TAAKLLIGSFREKYPNIL--IHVHTH--DMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 826 a~~l~~~Gad~i~i~Dt~G~l~P------~~~~~lv~~lr~~~p~ip--i~~H~H--nd~GlA~An~laAi~AGad~VD~ 895 (1427)
++.+.+.|||.|-+.=-.|.++- ..+++-|+++++..++.+ +-+-+- ++.-+-...+..|++||||.|-+
T Consensus 106 a~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKT 185 (297)
T 4eiv_A 106 AVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQT 185 (297)
T ss_dssp HHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEc
Confidence 88888899998877655666554 457777888888764332 333322 23332245677889999999998
Q ss_pred ccccCCCCCCCCcHHHHHHHHH
Q psy15244 896 AADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 896 av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
|. |+ .++++.+|++..+++
T Consensus 186 ST-Gf--~~~gAT~edV~lM~~ 204 (297)
T 4eiv_A 186 SS-GL--GATHATMFTVHLISI 204 (297)
T ss_dssp CC-SS--SSCCCCHHHHHHHHH
T ss_pred CC-CC--CCCCCCHHHHHHHHH
Confidence 85 33 356777777666554
No 317
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=82.54 E-value=5.4 Score=46.56 Aligned_cols=69 Identities=19% Similarity=0.309 Sum_probs=51.8
Q ss_pred HHHHHHHHC--CCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccc
Q psy15244 824 DLAKQLVES--GAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAAD 898 (1427)
Q Consensus 824 ~~a~~l~~~--Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~ 898 (1427)
+.++.+.+. |++.+.+-=+.| .|....+.++.+|+.+|++||.+.. .+....+..|+++|||.|+++..
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g--~~~~~~~~i~~lr~~~~~~~vi~g~----v~t~e~A~~a~~aGaD~I~v~~g 191 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG--YSEHFVEFVKDVRKRFPQHTIMAGN----VVTGEMVEELILSGADIIKVGIG 191 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT--TBHHHHHHHHHHHHHCTTSEEEEEE----ECSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHhccCCCCEEEEEecCC--CcHHHHHHHHHHHHhcCCCeEEEEe----CCCHHHHHHHHHhCCCEEEECCC
Confidence 456666665 999887632334 4667888999999999889988754 34467788999999999999643
No 318
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=82.54 E-value=3.1 Score=46.70 Aligned_cols=91 Identities=16% Similarity=0.192 Sum_probs=58.1
Q ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCC-CccCc-cc-----cc--cc-eEEEcCCCCCcccCCCCHHHHHHH
Q psy15244 57 MEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQ-DKFSA-HR-----TK--VD-QAFLVGKGMPPVAAYLNIPEIICI 125 (1427)
Q Consensus 57 ~kkVLIag-rGeia~riiraa~elGi~~vav~s~~-d~~s~-~~-----~~--aD-e~~~i~~~~~~~~~yldi~~Ii~i 125 (1427)
+++|||.| .|.++..+++++.+.|++++++..+. ....+ .. .+ .. +.+. .++.|.+.+.++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~--------~D~~d~~~l~~~ 73 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE--------GDINDHETLVKA 73 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEE--------CCTTCHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEE--------eCCCCHHHHHHH
Confidence 56899999 59999999999999999988876554 11000 00 00 01 1222 235677777777
Q ss_pred HHhcCCCEEEeCCCccc--ccHHHHHHHHHCC-Cc
Q psy15244 126 AKNNNVDAIHPGYGFLS--EREDFAKAVIGAG-LE 157 (1427)
Q Consensus 126 a~~~~vDaI~pg~gfls--E~~~~a~~~e~~G-i~ 157 (1427)
.+ ++|+|+-..+... ....+.+++.+.| +.
T Consensus 74 ~~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 106 (307)
T 2gas_A 74 IK--QVDIVICAAGRLLIEDQVKIIKAIKEAGNVK 106 (307)
T ss_dssp HT--TCSEEEECSSSSCGGGHHHHHHHHHHHCCCS
T ss_pred Hh--CCCEEEECCcccccccHHHHHHHHHhcCCce
Confidence 66 5999887655422 2235677787777 64
No 319
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=82.46 E-value=12 Score=42.93 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=82.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccCc---CCHHHHHHHHHHHHHHcCCceEEEee-cCCcchHHHHHHHHHHhcC
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAGL---LKPTAAKLLIGSFREKYPNILIHVHT-HDMAGTGVATTLACVKAGA 890 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~---l~P~~~~~lv~~lr~~~p~ipi~~H~-Hnd~GlA~An~laAi~AGa 890 (1427)
...|.+-+.++++.+.+.|+|-|.++=|+|= |+.++=.++++...+....+||-.|+ +|+..-++..+..|.++||
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga 103 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGA 103 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 4699999999999999999999999999995 88888899999988877678988887 6888999999999999999
Q ss_pred CEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 891 DIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 891 d~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
|.+=+ +.+. . .|+-+.++..++
T Consensus 104 davlv-~~P~-~---~~s~~~l~~~f~ 125 (313)
T 3dz1_A 104 AGVMI-APPP-S---LRTDEQITTYFR 125 (313)
T ss_dssp SEEEE-CCCT-T---CCSHHHHHHHHH
T ss_pred CEEEE-CCCC-C---CCCHHHHHHHHH
Confidence 99965 5555 2 256677776665
No 320
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=82.40 E-value=16 Score=40.18 Aligned_cols=177 Identities=13% Similarity=0.081 Sum_probs=105.1
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccC--CCcchH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSN--YSPAEV 755 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~--~~~nvv 755 (1427)
-+.+|+.++++...+ .|+.++-+..+.. .+ .+. +... +++++.. .+||.. .+..+.
T Consensus 33 ~t~~~i~~l~~~a~~--~~~~aVcv~p~~v--~a--------~~~---l~~~-~~v~v~t------vigFP~G~~~~~~k 90 (234)
T 1n7k_A 33 ATEEDVRNLVREASD--YGFRCAVLTPVYT--VK--------ISG---LAEK-LGVKLCS------VIGFPLGQAPLEVK 90 (234)
T ss_dssp CCHHHHHHHHHHHHH--HTCSEEEECHHHH--HH--------HHH---HHHH-HTCCEEE------EESTTTCCSCHHHH
T ss_pred CCHHHHHHHHHHHHH--hCCCEEEEchHHh--ee--------ehH---hCCC-CCceEEE------EeCCCCCCCcHHHH
Confidence 567899999988887 5888887653311 11 111 2221 1233332 234422 344555
Q ss_pred HHHHHHHHhcCCCEEEEeccCChH-----HHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHH
Q psy15244 756 GAFCRLASQAGIDIFRVFDPLNSV-----PNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLV 830 (1427)
Q Consensus 756 ~~~v~~a~~~Gid~~rif~~~nd~-----~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~ 830 (1427)
-.-++.|++.|.|.+-+......+ +.+....+.+...|. .+-+-+. ++ ..+.+.+...++.+.
T Consensus 91 ~~e~~~Av~~GAdEID~vinig~~~~~v~~ei~~v~~a~~~~g~---~lKvIlE-t~--------~L~~e~i~~a~ria~ 158 (234)
T 1n7k_A 91 LVEAQTVLEAGATELDVVPHLSLGPEAVYREVSGIVKLAKSYGA---VVKVILE-AP--------LWDDKTLSLLVDSSR 158 (234)
T ss_dssp HHHHHHHHHHTCCEEEECCCGGGCHHHHHHHHHHHHHHHHHTTC---EEEEECC-GG--------GSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeccchHHHHHHHHHHHHHHHHHhhcCC---eEEEEEe-cc--------CCCHHHHHHHHHHHH
Confidence 667899999999999887766543 244455555555555 4422222 21 246788999999999
Q ss_pred HCCCCEEEEcc---ccCcCCHHHHHHHHHHHHHHcCCceEEEee--cCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 831 ESGAQVLCLKD---MAGLLKPTAAKLLIGSFREKYPNILIHVHT--HDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 831 ~~Gad~i~i~D---t~G~l~P~~~~~lv~~lr~~~p~ipi~~H~--Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
++|||.|--.- +.|-.+++++.. +++++... ++|-.=. ++ ...+++-+++||+.+=+|
T Consensus 159 eaGADfVKTsTG~~~~~gAt~~dv~l--~~m~~~v~-v~VKaaGGirt-----~~~al~~i~aGa~RiG~S 221 (234)
T 1n7k_A 159 RAGADIVKTSTGVYTKGGDPVTVFRL--ASLAKPLG-MGVKASGGIRS-----GIDAVLAVGAGADIIGTS 221 (234)
T ss_dssp HTTCSEEESCCSSSCCCCSHHHHHHH--HHHHGGGT-CEEEEESSCCS-----HHHHHHHHHTTCSEEEET
T ss_pred HhCCCEEEeCCCCCCCCCCCHHHHHH--HHHHHHHC-CCEEEecCCCC-----HHHHHHHHHcCccccchH
Confidence 99999876542 113345655443 22565553 5553321 21 466777779999987554
No 321
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=82.32 E-value=59 Score=35.09 Aligned_cols=197 Identities=9% Similarity=-0.005 Sum_probs=0.0
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccc----cccCCCc-
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLV----GYSNYSP- 752 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~v----gy~~~~~- 752 (1427)
++..+....++.+.+ .|++.||++.+ ....+++++.+.+...=....+-.-..+.. +....|+
T Consensus 12 ~~~~~~~~~l~~~~~--~G~~~vEl~~~----------~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (260)
T 1k77_A 12 FTEVPFIERFAAARK--AGFDAVEFLFP----------YNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGR 79 (260)
T ss_dssp STTSCGGGHHHHHHH--HTCSEEECSCC----------TTSCHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTC
T ss_pred hcCCCHHHHHHHHHH--hCCCEEEecCC----------CCCCHHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhH
Q ss_pred -----chHHHHHHHHHhcCCCEEEEeccCCh------------HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCC
Q psy15244 753 -----AEVGAFCRLASQAGIDIFRVFDPLNS------------VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKK 815 (1427)
Q Consensus 753 -----nvv~~~v~~a~~~Gid~~rif~~~nd------------~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~ 815 (1427)
+..+..++.|.+.|++.+++...... .+.++...+.+++.|. ..++.....+..|...
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-----~l~~E~~~~~~~~~~~ 154 (260)
T 1k77_A 80 EHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGK-----RILVEALSPGVKPHYL 154 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTC-----EEEECCCCTTTSTTBS
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-----EEEEEeCCccCCCcCc
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHH----HHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCC
Q psy15244 816 KYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAK----LLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGAD 891 (1427)
Q Consensus 816 ~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~----~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad 891 (1427)
-.+.+.+.++++.+ |.+.+.++ +.+.-+. +....+++.. +--.++|.||..|-
T Consensus 155 ~~~~~~~~~l~~~~---~~~~~g~~-----~D~~h~~~~~~d~~~~l~~~~-~~i~~vH~~D~~~r-------------- 211 (260)
T 1k77_A 155 FSSQYQALAIVEEV---ARDNVFIQ-----LDTFHAQKVDGNLTHLIRDYA-GKYAHVQIAGLPDR-------------- 211 (260)
T ss_dssp CCSHHHHHHHHHHH---CCTTEEEE-----EEHHHHHHHTCCHHHHHHHTT-TSEEEEEECCTTTC--------------
T ss_pred cCCHHHHHHHHHHh---CCCCEEEE-----eeHHHHHhhCCCHHHHHHHhh-hheeEEEECCCCCC--------------
Q ss_pred EEEeccccCCCCCCCCcHHHHHHHHHhCCCC
Q psy15244 892 IVDVAADSMSGICSQPAMGTIVSCLENTDKR 922 (1427)
Q Consensus 892 ~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~ 922 (1427)
...| .|.-+...++..|+..|++
T Consensus 212 ------~~~G--~G~id~~~~~~~L~~~gy~ 234 (260)
T 1k77_A 212 ------HEPD--DGEINYPWLFRLFDEVGYQ 234 (260)
T ss_dssp ------CCSS--SSSSCHHHHHHHHHHTTCC
T ss_pred ------CCCC--CCccCHHHHHHHHHHcCCC
No 322
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=82.28 E-value=17 Score=42.24 Aligned_cols=130 Identities=12% Similarity=0.129 Sum_probs=81.1
Q ss_pred HHHHHHHHHhcCCCEEEEeccC---------------ChHHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCC
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPL---------------NSVPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYS 818 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~---------------nd~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~ 818 (1427)
..+..+.+.+.|.|.|-|-... ++.+.+.+.++.+++. +. -+.+-+... +.+ ..+
T Consensus 72 ~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~---PV~vKiR~g--~~~----~~~ 142 (350)
T 3b0p_A 72 LAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRV---PVTVKMRLG--LEG----KET 142 (350)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSS---CEEEEEESC--BTT----CCC
T ss_pred HHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCC---ceEEEEecC--cCc----ccc
Confidence 4445666778899998887532 2345667777877764 54 333333322 111 245
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccccC--cCCHH-------HHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhc
Q psy15244 819 LNYYEDLAKQLVESGAQVLCLKDMAG--LLKPT-------AAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 819 ~~~~~~~a~~l~~~Gad~i~i~Dt~G--~l~P~-------~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AG 889 (1427)
.+...++++.+.++|++.|.+-+-.. .+.+. .-.+++..+++.+|++||-.=.--..+ ..+.++++ |
T Consensus 143 ~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~---eda~~~l~-G 218 (350)
T 3b0p_A 143 YRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSL---EEALFHLK-R 218 (350)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSH---HHHHHHHT-T
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCH---HHHHHHHh-C
Confidence 67889999999999999999866331 12222 136789999999888998765533322 33344444 9
Q ss_pred CCEEEecc
Q psy15244 890 ADIVDVAA 897 (1427)
Q Consensus 890 ad~VD~av 897 (1427)
||.|-..-
T Consensus 219 aD~V~iGR 226 (350)
T 3b0p_A 219 VDGVMLGR 226 (350)
T ss_dssp SSEEEECH
T ss_pred CCEEEECH
Confidence 99885543
No 323
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=82.27 E-value=9.5 Score=43.47 Aligned_cols=209 Identities=15% Similarity=0.178 Sum_probs=115.0
Q ss_pred HHHHHhhcCCccEEeccCCCchhhhhhccc--cChH----HHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHH
Q psy15244 687 SPFVANRFNNLYSLEMWGGAVSHTCLKFLK--ECPW----ERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCR 760 (1427)
Q Consensus 687 a~~l~~~~~G~~~iE~~ggatfd~~~rfl~--e~p~----erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~ 760 (1427)
|..+++ +|++.|=+.|.+.--+.+.+-+ .-+| ...+.++...++.++.. =. -.||.+ |.| +...++
T Consensus 31 A~l~e~--aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~Pvia--D~--d~Gyg~-~~~-v~~tv~ 102 (302)
T 3fa4_A 31 ARVALS--AGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIA--DA--DTGYGG-PIM-VARTTE 102 (302)
T ss_dssp HHHHHT--TTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEE--EC--TTTTSS-HHH-HHHHHH
T ss_pred HHHHHH--cCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEE--EC--CCCCCC-HHH-HHHHHH
Confidence 444555 6888775533211111122211 1123 34455555555666432 22 237764 666 445688
Q ss_pred HHHhcCCCEEEEeccCC-------------hHHHHHHHHHHHHH----hcCCCcEEEEEEEeeccCCCCCCCCCCHHHHH
Q psy15244 761 LASQAGIDIFRVFDPLN-------------SVPNLVKGMDAVQQ----VTGGSTIVEATICYAGDLTNPNKKKYSLNYYE 823 (1427)
Q Consensus 761 ~a~~~Gid~~rif~~~n-------------d~~~~~~~i~~a~~----~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~ 823 (1427)
+..+.|+.-+.|=|.+. +.+.+..-|+++++ .+.. .+-.+ =| | -. ....++.-+
T Consensus 103 ~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d--~~I~A--RT-D---a~-~~~gldeAi 173 (302)
T 3fa4_A 103 QYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSD--IVVIA--RT-D---SL-QTHGYEESV 173 (302)
T ss_dssp HHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCC--CEEEE--EE-C---CH-HHHCHHHHH
T ss_pred HHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCC--EEEEE--Ee-c---cc-ccCCHHHHH
Confidence 88899999999999875 33344333333333 3431 22222 22 1 10 124688889
Q ss_pred HHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCC
Q psy15244 824 DLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGI 903 (1427)
Q Consensus 824 ~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~ 903 (1427)
+-++...++|||.|.+- |+-+++++.++++++. ++|+-+-.-...+...-+.-.-.+.|+++|-.....+ +
T Consensus 174 ~Ra~ay~eAGAD~ifi~---g~~~~~ei~~~~~~~~----~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~--r 244 (302)
T 3fa4_A 174 ARLRAARDAGADVGFLE---GITSREMARQVIQDLA----GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAAL--G 244 (302)
T ss_dssp HHHHHHHTTTCSEEEET---TCCCHHHHHHHHHHTT----TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTH--H
T ss_pred HHHHHHHHcCCCEEeec---CCCCHHHHHHHHHHhc----CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHH--H
Confidence 99999999999999875 5677887777666553 3565432221111111123445567999985544333 4
Q ss_pred CCCCcHHHHHHHHHhCCC
Q psy15244 904 CSQPAMGTIVSCLENTDK 921 (1427)
Q Consensus 904 tgn~~lE~vv~~L~~~g~ 921 (1427)
+...+++..+..|+..|.
T Consensus 245 aa~~A~~~~~~~i~~~g~ 262 (302)
T 3fa4_A 245 PAVAAMREAMEKLKRDGI 262 (302)
T ss_dssp HHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 555567777777765543
No 324
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=82.26 E-value=8.5 Score=43.90 Aligned_cols=132 Identities=17% Similarity=0.133 Sum_probs=89.7
Q ss_pred HHHHHHHhcCCCEEEEeccCChH----HHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCC--------CCCCCHHHHHH
Q psy15244 757 AFCRLASQAGIDIFRVFDPLNSV----PNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPN--------KKKYSLNYYED 824 (1427)
Q Consensus 757 ~~v~~a~~~Gid~~rif~~~nd~----~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~--------~~~~~~~~~~~ 824 (1427)
+.+.+|+++|.+.+-|=.|.-++ +.-++.+++++..|. .||+-|-..+. .+| ...++++...+
T Consensus 88 e~~~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gv---sVEaELG~igG--~Ed~~~~~~~~~~yT~Peea~~ 162 (307)
T 3n9r_A 88 ESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGV---SVEAELGRLMG--IEDNISVDEKDAVLVNPKEAEQ 162 (307)
T ss_dssp HHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTC---EEEEEESCCCC--C----------CCSCCHHHHHH
T ss_pred HHHHHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCC---eEEEEeeeecc--ccCCcccccccccCCCHHHHHH
Confidence 56888999999887665554444 345678889999998 88887766541 221 22467888877
Q ss_pred HHHHHHHCCCCEEEEc--cccCcC----CHHHHHHHHHHHHHHcCCceEEEee-------------------cCCcchHH
Q psy15244 825 LAKQLVESGAQVLCLK--DMAGLL----KPTAAKLLIGSFREKYPNILIHVHT-------------------HDMAGTGV 879 (1427)
Q Consensus 825 ~a~~l~~~Gad~i~i~--Dt~G~l----~P~~~~~lv~~lr~~~p~ipi~~H~-------------------Hnd~GlA~ 879 (1427)
++++ .|+|.|.++ -.=|.- .|.--.++++.+++. +++||-+|. +++.|...
T Consensus 163 Fv~~---TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~-~~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~ 238 (307)
T 3n9r_A 163 FVKE---SQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRL-TNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPF 238 (307)
T ss_dssp HHHH---HCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHH-HCSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCH
T ss_pred HHHH---HCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhc-CCCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCH
Confidence 7654 699988774 222332 243344555666554 489999986 33558889
Q ss_pred HHHHHHHHhcCCEEEecc
Q psy15244 880 ATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 880 An~laAi~AGad~VD~av 897 (1427)
.....|++.|+.-|+...
T Consensus 239 e~i~~ai~~GV~KiNi~T 256 (307)
T 3n9r_A 239 EFLQESVKGGINKVNTDT 256 (307)
T ss_dssp HHHHHHHHTTEEEEEECH
T ss_pred HHHHHHHHcCceEEEech
Confidence 999999999999887753
No 325
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=82.24 E-value=8.4 Score=43.97 Aligned_cols=77 Identities=10% Similarity=0.003 Sum_probs=50.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcC--CEEEEEecCCCccCcc--cccc--ceEEEcCCCCCcccCCCCHHHHHHHHHhc
Q psy15244 57 MEKILIANR-SEVAIRVARACNEMG--IKSVGIYSEQDKFSAH--RTKV--DQAFLVGKGMPPVAAYLNIPEIICIAKNN 129 (1427)
Q Consensus 57 ~kkVLIagr-Geia~riiraa~elG--i~~vav~s~~d~~s~~--~~~a--De~~~i~~~~~~~~~yldi~~Ii~ia~~~ 129 (1427)
++||||.|. |.++..+++.+.+.| +++++++......... .... .....+ ..+..|.+.+.++.+..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~Dl~d~~~~~~~~~~~ 97 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFV------KGEIQNGELLEHVIKER 97 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEE------ECCTTCHHHHHHHHHHH
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEE------EcCCCCHHHHHHHHhhc
Confidence 579999995 999999999999999 7777665433211110 0010 111111 12356788888888888
Q ss_pred CCCEEEeCCC
Q psy15244 130 NVDAIHPGYG 139 (1427)
Q Consensus 130 ~vDaI~pg~g 139 (1427)
++|+|+-.-+
T Consensus 98 ~~d~Vih~A~ 107 (346)
T 4egb_A 98 DVQVIVNFAA 107 (346)
T ss_dssp TCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 8999886544
No 326
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=82.22 E-value=42 Score=36.59 Aligned_cols=181 Identities=13% Similarity=0.040 Sum_probs=103.5
Q ss_pred ccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccC--CCcch
Q psy15244 677 RVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSN--YSPAE 754 (1427)
Q Consensus 677 r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~--~~~nv 754 (1427)
-.+.+|+.++++...+ .|+.++-+..+. +...++.+.++++. ..+||-. .+..+
T Consensus 13 ~~t~~~i~~l~~~A~~--~~~~aVcv~p~~----------------v~~a~~~l~gv~v~------tvigFP~G~~~~~~ 68 (226)
T 1vcv_A 13 YLTVDEAVAGARKAEE--LGVAAYCVNPIY----------------APVVRPLLRKVKLC------VVADFPFGALPTAS 68 (226)
T ss_dssp TCCHHHHHHHHHHHHH--HTCSEEEECGGG----------------HHHHGGGCSSSEEE------EEESTTTCCSCHHH
T ss_pred CCCHHHHHHHHHHHHH--hCCCEEEECHHH----------------HHHHHHHhCCCeEE------EEeCCCCCCCchHH
Confidence 3578899999888877 589888775431 22233334332222 2345522 23333
Q ss_pred HHHHHHHHHhcCCCEEEEeccCCh-----HHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPLNS-----VPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQ 828 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~nd-----~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~ 828 (1427)
.-.-++. ++.|.|.+-+...... .+.+..-+..++++ +. ..+-+-|... ..+.+.....++.
T Consensus 69 k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~--~~lKvIlEt~---------~Lt~eei~~a~~i 136 (226)
T 1vcv_A 69 RIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGG--RVVKVITEEP---------YLRDEERYTLYDI 136 (226)
T ss_dssp HHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT--SEEEEECCGG---------GCCHHHHHHHHHH
T ss_pred HHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcC--CCceEEEecc---------CCCHHHHHHHHHH
Confidence 4445777 8999999988876553 34444444444443 22 1222222211 2357889999999
Q ss_pred HHHCCCCEEEEc--cc----------cCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHh---cCC--
Q psy15244 829 LVESGAQVLCLK--DM----------AGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKA---GAD-- 891 (1427)
Q Consensus 829 l~~~Gad~i~i~--Dt----------~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~A---Gad-- 891 (1427)
+.++|||.|--. =+ .|-.+|+++..+-+.+++.-+.++|-.=.=--. ...+++-+++ ||+
T Consensus 137 a~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt---~~~al~~i~a~~~Ga~~~ 213 (226)
T 1vcv_A 137 IAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRT---REQAKAIVDAIGWGEDPA 213 (226)
T ss_dssp HHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCS---HHHHHHHHHHHCSCSCTT
T ss_pred HHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCC---HHHHHHHHHHHHCCCCcC
Confidence 999999987654 22 366788888665555554333466533221111 3444444455 999
Q ss_pred --EEEec
Q psy15244 892 --IVDVA 896 (1427)
Q Consensus 892 --~VD~a 896 (1427)
.+=+|
T Consensus 214 ~fRiGtS 220 (226)
T 1vcv_A 214 RVRLGTS 220 (226)
T ss_dssp TEEEEES
T ss_pred CceEecC
Confidence 88554
No 327
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=82.16 E-value=11 Score=41.76 Aligned_cols=116 Identities=16% Similarity=0.088 Sum_probs=73.4
Q ss_pred HHHHHHHHHhcCCCEEEEeccCChH---HHHHHHHHHHHHhcCCCcEEEEEEEe--eccCCCCCCC--CCCHHHHHHHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPLNSV---PNLVKGMDAVQQVTGGSTIVEATICY--AGDLTNPNKK--KYSLNYYEDLAK 827 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~nd~---~~~~~~i~~a~~~G~~~~~v~~~i~~--t~d~~~p~~~--~~~~~~~~~~a~ 827 (1427)
..+.++.+++.|++.|-++..-... ..++...+.+++.|+ .+.....+ ..++.+|+.. ....+++.+.++
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl---~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~ 95 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGL---TVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLD 95 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTC---EEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCC---ceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5678899999999999998653222 456667778888998 55443221 2344444321 123478888888
Q ss_pred HHHHCCCCEEEEc--cccCc-------CCHHHHHHHHHHHHH------HcCCceEEEeecCC
Q psy15244 828 QLVESGAQVLCLK--DMAGL-------LKPTAAKLLIGSFRE------KYPNILIHVHTHDM 874 (1427)
Q Consensus 828 ~l~~~Gad~i~i~--Dt~G~-------l~P~~~~~lv~~lr~------~~p~ipi~~H~Hnd 874 (1427)
.+.++|+..+.+. ...|. ........++..|++ .. ++.|.+|.|+.
T Consensus 96 ~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-gv~l~lEn~~~ 156 (290)
T 2qul_A 96 DCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDY-GIIYALEVVNR 156 (290)
T ss_dssp HHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHH-TCEEEEECCCT
T ss_pred HHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHc-CCEEEEEeCcc
Confidence 9999999988752 11132 233444445555543 23 68899999884
No 328
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=82.10 E-value=15 Score=40.25 Aligned_cols=197 Identities=13% Similarity=0.068 Sum_probs=119.8
Q ss_pred CCccEEeccCCCchhhhhhccccChHHHHHH-HHHhCCCCceeeeecccccccccCCCcchHHHHHHHHHhcC-CCEEEE
Q psy15244 695 NNLYSLEMWGGAVSHTCLKFLKECPWERLAE-LRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAG-IDIFRV 772 (1427)
Q Consensus 695 ~G~~~iE~~ggatfd~~~rfl~e~p~erl~~-lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~G-id~~ri 772 (1427)
.|.+.+|.- .| |+.+..++.+.. +++..++.++-.-+|...-=|.....++...+.++.+++.| +|.+-|
T Consensus 27 ~~~D~vElR----vD----~l~~~~~~~v~~~l~~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~d~iDv 98 (231)
T 2ocz_A 27 EDVNLIEWR----AD----FLPKDEIVAVAPAIFEKFAGKEIIFTLRTVQEGGNITLSSQEYVDIIKEINAIYNPDYIDF 98 (231)
T ss_dssp TTCSEEEEE----GG----GSCGGGHHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHHCCSEEEE
T ss_pred cCCCEEEEE----ec----cccccCHHHHHHHHHHHcCCCcEEEEEeecccCCCCCCCHHHHHHHHHHHHHcCCCCEEEE
Confidence 478999962 22 333322445543 33336667777777754333444456666777889999988 998887
Q ss_pred eccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHH
Q psy15244 773 FDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAK 852 (1427)
Q Consensus 773 f~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~ 852 (1427)
=.... +..++.++...+ .-++|- ||. ... +.+.++.+++.+.|||++-|+=|+ -.+.++.
T Consensus 99 El~~~-----~~~i~~~~~~~k------vI~S~H-df~-----~tp-~el~~~~~~~~~~gaDivKia~~a--~~~~D~l 158 (231)
T 2ocz_A 99 EYFTH-----KSVFQEMLDFPN------LILSYH-NFE-----ETP-ENLMEAFSEMTKLAPRVVKIAVMP--QSEQDVL 158 (231)
T ss_dssp ETTTT-----GGGGGGGTTCSS------EEEEEE-ESS-----CCC-TTHHHHHHHHHHTCCSEEEEEECC--SSHHHHH
T ss_pred ECCCC-----HHHHHHhhcCCe------EEEEec-CCC-----CCH-HHHHHHHHHHHHcCCCEEEEEeec--CCHHHHH
Confidence 76553 122333333211 223443 331 122 788899999999999999998775 3667888
Q ss_pred HHHHHHHH---HcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCC
Q psy15244 853 LLIGSFRE---KYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKR 922 (1427)
Q Consensus 853 ~lv~~lr~---~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~ 922 (1427)
.|..+..+ ..++.|+-. -+.-.+|...=+.+--.|--+.-+++.. .--+||.+.+++...|+.+..+
T Consensus 159 ~ll~~~~~~~~~~~~~P~I~--~~MG~~G~~SRi~~~~~GS~~Tf~~l~~-~sAPGQl~~~el~~~l~~l~~~ 228 (231)
T 2ocz_A 159 DLMNYTRGFKTLNPEQEFAT--ISMGKLGRLSRFAGDVIGSSWTYVSLDH-VSGPGQVTLNDMKRIIEVLEMD 228 (231)
T ss_dssp HHHHHHHHHHHHCTTCEEEE--EECHHHHGGGGGCHHHHTCCEEECBC-------CCCBHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhhccCCCCEEE--EEcCCCchhHHHHHHHhCCceEeccCCC-CCCCCCCCHHHHHHHHHHhhhh
Confidence 88776543 235667533 3334445555566777788888888744 5578999999998888765433
No 329
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=82.01 E-value=3.5 Score=46.16 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEcc-ccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHh--cCCEE
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKD-MAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKA--GADIV 893 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~D-t~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~A--Gad~V 893 (1427)
.+.+..++.++++.+.|||+|-|.= ....-.++++.+++..+++.. ++||.+-+=+ ...+.+|+++ |+++|
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~-~~pisIDT~~-----~~v~~aAl~a~~Ga~iI 95 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS-NLTLCLDSTN-----IKAIEAGLKKCKNRAMI 95 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC-CSEEEEECSC-----HHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhC-CCeEEEeCCC-----HHHHHHHHhhCCCCCEE
Confidence 4789999999999999999998872 223456788999999999876 8999996654 4556788888 99999
Q ss_pred EeccccCCCCCCCCcHHHHHHHHHhCC
Q psy15244 894 DVAADSMSGICSQPAMGTIVSCLENTD 920 (1427)
Q Consensus 894 D~av~GmG~~tgn~~lE~vv~~L~~~g 920 (1427)
+-.. |. ..+++.++....+++
T Consensus 96 Ndvs-~~-----~d~~~~~~~~~a~~~ 116 (262)
T 1f6y_A 96 NSTN-AE-----REKVEKLFPLAVEHG 116 (262)
T ss_dssp EEEC-SC-----HHHHHHHHHHHHHTT
T ss_pred EECC-CC-----cccHHHHHHHHHHhC
Confidence 7432 22 234556766666654
No 330
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=81.89 E-value=4.5 Score=46.56 Aligned_cols=140 Identities=14% Similarity=0.064 Sum_probs=84.7
Q ss_pred HHHHHHHHH-HCCCCEEEEc-cccCcC----CHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCC---E
Q psy15244 822 YEDLAKQLV-ESGAQVLCLK-DMAGLL----KPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGAD---I 892 (1427)
Q Consensus 822 ~~~~a~~l~-~~Gad~i~i~-Dt~G~l----~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad---~ 892 (1427)
..+.+++.+ +.|||.|.|. .++.-. .+++..++|+.+++.+ ++||.+-.-.+.-.=...+-+|+++|++ .
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~-~vPlsIDg~~~~T~~~eV~eaAleagag~~~l 160 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAV-GVPLVVVGCGDVEKDHEVLEAVAEAAAGENLL 160 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-CSCEEEECCSCHHHHHHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhC-CceEEEECCCCCCCCHHHHHHHHHhcCCCCCe
Confidence 678888888 9999999996 443332 4567888999999987 9999998544444556677899999976 6
Q ss_pred EEeccccCCCCCCCCcHHHHHHHHHhCCCC----CCCChhhHHHHHHHHHHHhCCCCCCCCcccccc--hhhhhHHHHHH
Q psy15244 893 VDVAADSMSGICSQPAMGTIVSCLENTDKR----CGIDLHDVCDYSSYWRKVRELYAPAHNLLWRCG--IDLHDVCDYSS 966 (1427)
Q Consensus 893 VD~av~GmG~~tgn~~lE~vv~~L~~~g~~----tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~~--~f~~~~~~~~~ 966 (1427)
|+. +++ + + .+.++.....+|.. +..|+.. +.+.+......-+++.+=++-.+ .|......--.
T Consensus 161 INs-v~~--~---~--~~~m~~laa~~g~~vVlmh~~d~~~---~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~~l~ 229 (323)
T 4djd_D 161 LGN-AEQ--E---N--YKSLTAACMVHKHNIIARSPLDINI---CKQLNILINEMNLPLDHIVIDPSIGGLGYGIEYSFS 229 (323)
T ss_dssp EEE-EBT--T---B--CHHHHHHHHHHTCEEEEECSSCHHH---HHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHH
T ss_pred EEE-CCc--c---c--HHHHHHHHHHhCCeEEEEccchHHH---HHHHHHHHHHcCCCHHHEEEeCCCccccCCHHHHHH
Confidence 663 322 1 2 34555555544422 2224432 33444555566666666333222 24444433334
Q ss_pred HHHHhhh
Q psy15244 967 YWRKVRE 973 (1427)
Q Consensus 967 ~~~~~~~ 973 (1427)
.+...|.
T Consensus 230 ~l~~ir~ 236 (323)
T 4djd_D 230 IMERIRL 236 (323)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 331
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=81.87 E-value=3.5 Score=47.69 Aligned_cols=82 Identities=15% Similarity=0.151 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHCCCCEEEEccc-cCcCCHHHH--------HHHHHHHHHHcCCceEEEeecCCcchHHHHHHH-HHHhcC
Q psy15244 821 YYEDLAKQLVESGAQVLCLKDM-AGLLKPTAA--------KLLIGSFREKYPNILIHVHTHDMAGTGVATTLA-CVKAGA 890 (1427)
Q Consensus 821 ~~~~~a~~l~~~Gad~i~i~Dt-~G~l~P~~~--------~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~la-Ai~AGa 890 (1427)
.+.++++...++|+|.|.|.|+ +|.+.|... .++++.+++. |++|+.+||..+ ...+. -.+.|+
T Consensus 180 ~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i~~~~g~-----~~~l~~l~~~g~ 253 (338)
T 2eja_A 180 TVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVIYFFRGS-----SSFIDLAVDYRA 253 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEEEEESSH-----HHHHHHHTTSCC
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEEEEcCCc-----HHHHHHHHHcCC
Confidence 4556777778899999999985 456788664 4556677766 688999998554 22333 346899
Q ss_pred CEEEeccccCCCCCCCCcHHHHHHHH
Q psy15244 891 DIVDVAADSMSGICSQPAMGTIVSCL 916 (1427)
Q Consensus 891 d~VD~av~GmG~~tgn~~lE~vv~~L 916 (1427)
|.++.-. ..+++++...+
T Consensus 254 d~~~~d~--------~~dl~~~~~~~ 271 (338)
T 2eja_A 254 DALSVDW--------SVDIPELFKIY 271 (338)
T ss_dssp SEEECCT--------TSCHHHHHHHC
T ss_pred CEEEeCC--------CCCHHHHHHhC
Confidence 9886522 24666665555
No 332
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=81.80 E-value=7.7 Score=45.74 Aligned_cols=139 Identities=17% Similarity=0.071 Sum_probs=83.4
Q ss_pred chHHHHHHHH---HhcCCCEEEEeccC------------C------------hHHHHHHHHHHHHHhcCCCcEEEEEEEe
Q psy15244 753 AEVGAFCRLA---SQAGIDIFRVFDPL------------N------------SVPNLVKGMDAVQQVTGGSTIVEATICY 805 (1427)
Q Consensus 753 nvv~~~v~~a---~~~Gid~~rif~~~------------n------------d~~~~~~~i~~a~~~G~~~~~v~~~i~~ 805 (1427)
.+++.|++.| .++|.|.|.|-.+. | ..+-+.+.+++++++=... .+.+-|+-
T Consensus 163 ~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~vrls~ 241 (377)
T 2r14_A 163 GIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGIRLTP 241 (377)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEEEecc
Confidence 4556666655 67899999996542 1 1234556677777653211 22222221
Q ss_pred eccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCC--HH-HHHHHHHHHHHHcCCceEEEeecCCcchHHHHH
Q psy15244 806 AGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLK--PT-AAKLLIGSFREKYPNILIHVHTHDMAGTGVATT 882 (1427)
Q Consensus 806 t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~--P~-~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~ 882 (1427)
. ++........+.+.+.++++.++++|+|.|.+.- |... |. .-.++++.+|+.+ ++||-.=.- .....+
T Consensus 242 ~-~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~--~~~~~~~~~~~~~~~~~ik~~~-~iPvi~~Gg----i~~~~a 313 (377)
T 2r14_A 242 F-LELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNE--PDWIGGDITYPEGFREQMRQRF-KGGLIYCGN----YDAGRA 313 (377)
T ss_dssp T-CCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEEC--CC------CCCTTHHHHHHHHC-CSEEEEESS----CCHHHH
T ss_pred c-cccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC--CcccCCCCcchHHHHHHHHHHC-CCCEEEECC----CCHHHH
Confidence 1 1111001245778899999999999999988853 2111 10 0135678899998 788765432 226788
Q ss_pred HHHHHhc-CCEEEeccccC
Q psy15244 883 LACVKAG-ADIVDVAADSM 900 (1427)
Q Consensus 883 laAi~AG-ad~VD~av~Gm 900 (1427)
.+++++| ||.|-.+=.-+
T Consensus 314 ~~~l~~g~aD~V~igR~~l 332 (377)
T 2r14_A 314 QARLDDNTADAVAFGRPFI 332 (377)
T ss_dssp HHHHHTTSCSEEEESHHHH
T ss_pred HHHHHCCCceEEeecHHHH
Confidence 8999998 99986554333
No 333
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=81.76 E-value=7.7 Score=45.54 Aligned_cols=138 Identities=15% Similarity=0.176 Sum_probs=83.5
Q ss_pred chHHHHHHH---HHhcCCCEEEEeccC------------C------------hHHHHHHHHHHHHHhcCCCcEEEEEEEe
Q psy15244 753 AEVGAFCRL---ASQAGIDIFRVFDPL------------N------------SVPNLVKGMDAVQQVTGGSTIVEATICY 805 (1427)
Q Consensus 753 nvv~~~v~~---a~~~Gid~~rif~~~------------n------------d~~~~~~~i~~a~~~G~~~~~v~~~i~~ 805 (1427)
.+++.|++. |.++|.|.|.|-.+. | ..+-+.+.+++++++-... .+.+-|+-
T Consensus 158 ~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-pv~vris~ 236 (365)
T 2gou_A 158 QVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAE-RVGVRLAP 236 (365)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGG-GEEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCC-cEEEEEcc
Confidence 345666665 478999999995532 1 1224556677777643211 12222222
Q ss_pred eccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcccc--C-cCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHH
Q psy15244 806 AGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMA--G-LLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATT 882 (1427)
Q Consensus 806 t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~--G-~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~ 882 (1427)
.+++.+ .....+.+.+.++++.++++|+|-|.+.-.. | -..|. ++++.+|+.+ ++||-.=.-- ...++
T Consensus 237 ~~~~~~-~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~---~~~~~i~~~~-~iPvi~~Ggi----~~~~a 307 (365)
T 2gou_A 237 LTTLNG-TVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPV---SFKRALREAY-QGVLIYAGRY----NAEKA 307 (365)
T ss_dssp SCCTTS-CCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCH---HHHHHHHHHC-CSEEEEESSC----CHHHH
T ss_pred ccccCC-CCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccH---HHHHHHHHHC-CCcEEEeCCC----CHHHH
Confidence 111110 0124578889999999999999999886531 1 11222 5788899998 7887543322 25788
Q ss_pred HHHHHhc-CCEEEeccccC
Q psy15244 883 LACVKAG-ADIVDVAADSM 900 (1427)
Q Consensus 883 laAi~AG-ad~VD~av~Gm 900 (1427)
..++++| ||.|-.+=.-+
T Consensus 308 ~~~l~~g~aD~V~igR~~i 326 (365)
T 2gou_A 308 EQAINDGLADMIGFGRPFI 326 (365)
T ss_dssp HHHHHTTSCSEEECCHHHH
T ss_pred HHHHHCCCcceehhcHHHH
Confidence 8999999 99986554333
No 334
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=81.75 E-value=0.49 Score=46.07 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=32.5
Q ss_pred CCceecCCCeEEEEEEecCCCEEecC-CEEEEEEcCC
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQVKKN-DVLIVMSVMK 1392 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~V~~G-~~l~~ieamK 1392 (1427)
...|.||+.|+|.++.+++|+.|..| ++|+.|..+.
T Consensus 67 ~~~i~AP~~G~V~~~~~~~G~~v~~g~~~l~~i~~~~ 103 (116)
T 2k32_A 67 HTEIKAPFDGTIGDALVNIGDYVSASTTELVRVTNLN 103 (116)
T ss_dssp EEEEECSSSEEECCCSCCTTCEECTTTSCCEEEECSC
T ss_pred CCEEEcCCCEEEEEEECCCCCEEcCCCcEEEEEECCC
Confidence 45899999999999999999999999 9999987654
No 335
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=81.72 E-value=1.6 Score=47.96 Aligned_cols=103 Identities=17% Similarity=0.247 Sum_probs=70.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHH--HHHHHHHHHHHc-CCceEEEeecCCcchHHHHHHHHHHhcCCEE
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTA--AKLLIGSFREKY-PNILIHVHTHDMAGTGVATTLACVKAGADIV 893 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~--~~~lv~~lr~~~-p~ipi~~H~Hnd~GlA~An~laAi~AGad~V 893 (1427)
.|...+.+-++.+.++|+|.+.+.=|-|...|.- -..+|+.||+.+ |++++.+|.|-+.-... .-.++++|||+|
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~--i~~~~~aGad~i 91 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQW--VKPMAVAGANQY 91 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGG--HHHHHHHTCSEE
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHH--HHHHHHcCCCEE
Confidence 4555677888899999999666655557654422 335788899886 78888888886543322 345778999999
Q ss_pred EeccccCCCCCCCCcHHHHHHHHHhCCCCCCCCh
Q psy15244 894 DVAADSMSGICSQPAMGTIVSCLENTDKRCGIDL 927 (1427)
Q Consensus 894 D~av~GmG~~tgn~~lE~vv~~L~~~g~~tgidl 927 (1427)
..-. +.+ ..+..++..++..|...++.+
T Consensus 92 tvH~----Ea~--~~~~~~i~~i~~~G~k~gval 119 (228)
T 3ovp_A 92 TFHL----EAT--ENPGALIKDIRENGMKVGLAI 119 (228)
T ss_dssp EEEG----GGC--SCHHHHHHHHHHTTCEEEEEE
T ss_pred EEcc----CCc--hhHHHHHHHHHHcCCCEEEEE
Confidence 6632 222 256778888888877666555
No 336
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=81.71 E-value=14 Score=41.77 Aligned_cols=171 Identities=18% Similarity=0.115 Sum_probs=107.7
Q ss_pred CCccEEecc-----CCCchhhhhhccccChHHHHHHHHHhCCCCceeeeeccccc-ccccCCCcchHHHHHHHHHhcCCC
Q psy15244 695 NNLYSLEMW-----GGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSL-VGYSNYSPAEVGAFCRLASQAGID 768 (1427)
Q Consensus 695 ~G~~~iE~~-----ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~-vgy~~~~~nvv~~~v~~a~~~Gid 768 (1427)
.|.+.||.= ||-| ++ ...++.+++.. ++++..++|-... +=|....-+++..+|+.+.+.|.|
T Consensus 58 gGAdRIELc~~l~~GGlT---------PS-~g~i~~a~~~~-~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAd 126 (287)
T 3iwp_A 58 GGADRIELCSGLSEGGTT---------PS-MGVLQVVKQSV-QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGAD 126 (287)
T ss_dssp HTCSEEEECBCGGGTCBC---------CC-HHHHHHHHTTC-CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred hCCCEEEECCCCCCCCCC---------CC-HHHHHHHHHhc-CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCC
Confidence 499999963 3333 22 34566666655 6899999986543 446666667788899999999999
Q ss_pred EEEEec----cCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccC
Q psy15244 769 IFRVFD----PLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAG 844 (1427)
Q Consensus 769 ~~rif~----~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G 844 (1427)
.|.+-. ..=|++.+++.++.++..+. ++.-+-|. -.| ..+..+.+.++|+++|-- .|
T Consensus 127 GvVfG~L~~dg~iD~~~~~~Li~~a~~l~v-------TFHRAFD~------~~d---~~~Ale~Li~lGvdrILT---SG 187 (287)
T 3iwp_A 127 GLVFGALTEDGHIDKELCMSLMAICRPLPV-------TFHRAFDM------VHD---PMAALETLLTLGFERVLT---SG 187 (287)
T ss_dssp EEEECCBCTTSCBCHHHHHHHHHHHTTSCE-------EECGGGGG------CSC---HHHHHHHHHHHTCSEEEE---CT
T ss_pred EEEEeeeCCCCCcCHHHHHHHHHHcCCCcE-------EEECchhc------cCC---HHHHHHHHHHcCCCEEEC---CC
Confidence 887763 22367888888887654332 22222111 112 245667888889999874 55
Q ss_pred cCC-HHHHHHHHHHHHHHc-CCceEEEeecCCcchHHHHHHHHHH-hcCCEEEecccc
Q psy15244 845 LLK-PTAAKLLIGSFREKY-PNILIHVHTHDMAGTGVATTLACVK-AGADIVDVAADS 899 (1427)
Q Consensus 845 ~l~-P~~~~~lv~~lr~~~-p~ipi~~H~Hnd~GlA~An~laAi~-AGad~VD~av~G 899 (1427)
... -.+-.++++.|.+.. ..++|-. ..|.-..|.-.-++ +|++.++.|...
T Consensus 188 ~~~~a~~Gl~~Lk~Lv~~a~~rI~Ima----GGGV~~~Ni~~l~~~tG~~~~H~S~~~ 241 (287)
T 3iwp_A 188 CDSSALEGLPLIKRLIEQAKGRIVVMP----GGGITDRNLQRILEGSGATEFHCSARS 241 (287)
T ss_dssp TSSSTTTTHHHHHHHHHHHTTSSEEEE----CTTCCTTTHHHHHHHHCCSEEEECCEE
T ss_pred CCCChHHhHHHHHHHHHHhCCCCEEEE----CCCcCHHHHHHHHHhhCCCEEeECcCc
Confidence 422 122334455555444 2466654 23555566666565 999999998643
No 337
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=81.54 E-value=14 Score=43.72 Aligned_cols=182 Identities=14% Similarity=0.115 Sum_probs=110.5
Q ss_pred CHHHHHHHHHHHHhhcCCccEEecc--CCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHH
Q psy15244 679 RTYDLKKVSPFVANRFNNLYSLEMW--GGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVG 756 (1427)
Q Consensus 679 ~t~d~l~ia~~l~~~~~G~~~iE~~--ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~ 756 (1427)
+.+..+++|+.+.+ +|.+.+=+. -+-|.- +.| ++-+|+.++.|++......+..+..-. .+..
T Consensus 154 s~e~a~~~a~~~k~--aGa~~vk~q~fkprts~--~~f-~gl~~egl~~L~~~~~~~Gl~~~te~~-------d~~~--- 218 (385)
T 3nvt_A 154 SYEQVAAVAESIKA--KGLKLIRGGAFKPRTSP--YDF-QGLGLEGLKILKRVSDEYGLGVISEIV-------TPAD--- 218 (385)
T ss_dssp CHHHHHHHHHHHHH--TTCCEEECBSSCCCSST--TSC-CCCTHHHHHHHHHHHHHHTCEEEEECC-------SGGG---
T ss_pred CHHHHHHHHHHHHH--cCCCeEEcccccCCCCh--Hhh-cCCCHHHHHHHHHHHHHcCCEEEEecC-------CHHH---
Confidence 67788899999998 798877543 222211 112 234567777777665433333333211 1222
Q ss_pred HHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCE
Q psy15244 757 AFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQV 836 (1427)
Q Consensus 757 ~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~ 836 (1427)
++.+.+. +|++.|-.... .|. ..++++.+.|+ -+ +.-+| .-.+++.+...++.+.+.|.+.
T Consensus 219 --~~~l~~~-vd~lkIgs~~~--~n~-~LL~~~a~~gk---PV---ilk~G-------~~~t~~e~~~Ave~i~~~Gn~~ 279 (385)
T 3nvt_A 219 --IEVALDY-VDVIQIGARNM--QNF-ELLKAAGRVDK---PI---LLKRG-------LSATIEEFIGAAEYIMSQGNGK 279 (385)
T ss_dssp --HHHHTTT-CSEEEECGGGT--TCH-HHHHHHHTSSS---CE---EEECC-------TTCCHHHHHHHHHHHHTTTCCC
T ss_pred --HHHHHhh-CCEEEECcccc--cCH-HHHHHHHccCC---cE---EEecC-------CCCCHHHHHHHHHHHHHcCCCe
Confidence 5556666 99988876542 221 33445566777 22 22232 1278999999999999999987
Q ss_pred EEEccc--cCcCC-HHHHHH--HHHHHHHHcCCceEEE-eecC--CcchHHHHHHHHHHhcCC--EEEe
Q psy15244 837 LCLKDM--AGLLK-PTAAKL--LIGSFREKYPNILIHV-HTHD--MAGTGVATTLACVKAGAD--IVDV 895 (1427)
Q Consensus 837 i~i~Dt--~G~l~-P~~~~~--lv~~lr~~~p~ipi~~-H~Hn--d~GlA~An~laAi~AGad--~VD~ 895 (1427)
|.|+.- ...-+ |....+ -+..+|+.+ ++||-+ |+|. +..+-...++||+.+||+ +|+.
T Consensus 280 i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~-~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 280 IILCERGIRTYEKATRNTLDISAVPILKKET-HLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEV 347 (385)
T ss_dssp EEEEECCBCCSCCSSSSBCCTTHHHHHHHHB-SSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEB
T ss_pred EEEEECCCCCCCCCCccccCHHHHHHHHHhc-CCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEe
Confidence 778774 22211 211111 266788887 788733 8885 234445678999999999 8876
No 338
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=81.53 E-value=1.1 Score=52.24 Aligned_cols=48 Identities=27% Similarity=0.391 Sum_probs=38.6
Q ss_pred EEEecCCCEEecCCEEEEEEcCCceeeeecCCCeEEEEEE-----------------------------ecCCCeeCCCC
Q psy15244 1370 EVKVKVGQQVKKNDVLIVMSVMKTETLIHASADGVVKEIF-----------------------------VEVGGQVAQND 1420 (1427)
Q Consensus 1370 ~v~V~~Gd~V~~G~~l~~ieamKme~~i~Ap~~G~V~~i~-----------------------------v~~G~~V~~g~ 1420 (1427)
+++|++|+.|++||.|+.=. +|.|..+|+|.+.. |+.|+.|.+||
T Consensus 62 ~l~v~~g~~V~~g~~la~wd------pii~e~~G~v~~~~~~~~p~i~i~d~~g~~~y~lp~ga~l~~~v~~g~~v~~G~ 135 (352)
T 2xhc_A 62 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVDVKNVRKIVVETIDRKYTKTYYIPESAGIEPGLRVGTKVKQGL 135 (352)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEEEEEEEEEEEECTTCSSEEEEEEEGGGCBCTTCCTTCEECTTC
T ss_pred EEEecCCCEEcCCCEEEEec------cEEEecceEEEeeccCCceEEEEEcCCCCEEEEcCCCcEEEEecCCCCEEccCc
Confidence 47899999999999999866 78888888875433 67788888888
Q ss_pred EEE
Q psy15244 1421 LVV 1423 (1427)
Q Consensus 1421 ~L~ 1423 (1427)
+|+
T Consensus 136 vla 138 (352)
T 2xhc_A 136 PLS 138 (352)
T ss_dssp BSB
T ss_pred EEe
Confidence 764
No 339
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=81.48 E-value=18 Score=41.88 Aligned_cols=132 Identities=23% Similarity=0.214 Sum_probs=81.8
Q ss_pred HHHHHH---HHHhcCCCEEEEeccC------------C--------hH----HHHHHHHHHHHHhcCCCcEEEEEEEeec
Q psy15244 755 VGAFCR---LASQAGIDIFRVFDPL------------N--------SV----PNLVKGMDAVQQVTGGSTIVEATICYAG 807 (1427)
Q Consensus 755 v~~~v~---~a~~~Gid~~rif~~~------------n--------d~----~~~~~~i~~a~~~G~~~~~v~~~i~~t~ 807 (1427)
++.|.+ +|.++|.|.|.|-.+- | ++ +-+.+.+++++++-. ..+.+-|+-.
T Consensus 143 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~--~pv~vRls~~- 219 (340)
T 3gr7_A 143 VQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWD--GPLFVRISAS- 219 (340)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCC--SCEEEEEESC-
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcC--CceEEEeccc-
Confidence 444444 4556899999887652 2 12 234567777776531 1333333322
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcccc--Cc---CCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHH
Q psy15244 808 DLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMA--GL---LKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATT 882 (1427)
Q Consensus 808 d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~--G~---l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~ 882 (1427)
|+. + ...+.+.+.++++.++++|+|.|.+.+.. .. ..|..-.++++.+|+.+ ++||-.=.--+ ....+
T Consensus 220 ~~~-~--~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-~iPVi~~GgI~---s~e~a 292 (340)
T 3gr7_A 220 DYH-P--DGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-DIPTGAVGLIT---SGWQA 292 (340)
T ss_dssp CCS-T--TSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-TCCEEEESSCC---CHHHH
T ss_pred ccc-C--CCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-CCcEEeeCCCC---CHHHH
Confidence 221 1 24677889999999999999999986521 10 11222356788999998 88876543221 24567
Q ss_pred HHHHHhc-CCEEEec
Q psy15244 883 LACVKAG-ADIVDVA 896 (1427)
Q Consensus 883 laAi~AG-ad~VD~a 896 (1427)
.+++++| ||.|-..
T Consensus 293 ~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 293 EEILQNGRADLVFLG 307 (340)
T ss_dssp HHHHHTTSCSEEEEC
T ss_pred HHHHHCCCeeEEEec
Confidence 7889999 9988554
No 340
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=81.48 E-value=30 Score=37.55 Aligned_cols=182 Identities=11% Similarity=0.119 Sum_probs=98.7
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
.+.++..++++...+ .|+.++-+..+ .++..++...++++.... + -..|. ......-.
T Consensus 17 ~t~~~i~~l~~~a~~--~g~~~v~v~~~----------------~v~~~~~~l~~v~v~~v~-~-~P~g~--~~~~~k~~ 74 (225)
T 1mzh_A 17 LSEKEIEEFVLKSEE--LGIYAVCVNPY----------------HVKLASSIAKKVKVCCVI-G-FPLGL--NKTSVKVK 74 (225)
T ss_dssp CCHHHHHHHHHHHHH--TTCSEEEECGG----------------GHHHHHHHCSSSEEEEEE-S-TTTCC--SCHHHHHH
T ss_pred CCHHHHHHHHHHHHH--hCCeEEEECHH----------------HHHHHHHHhcCCceeeEe-c-CCCCc--cchhhhHH
Confidence 677888888888777 58877654321 122222222223222111 1 01111 11111223
Q ss_pred HHHHHHhcCCCEEEEeccCCh-----HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHC
Q psy15244 758 FCRLASQAGIDIFRVFDPLNS-----VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVES 832 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd-----~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~ 832 (1427)
.++.|.+.|.|.+.+....+. .+.+..-++.++++.. +..+.. .+- .+ ..+.+.+.++++.+.++
T Consensus 75 ~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKv--i~e----~~---~l~~~~~~~~a~~a~ea 144 (225)
T 1mzh_A 75 EAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKV--IVE----TP---YLNEEEIKKAVEICIEA 144 (225)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEE--ECC----GG---GCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEE--EEe----CC---CCCHHHHHHHHHHHHHh
Confidence 457889999999996554443 2344445677776543 223222 111 12 36778899999999999
Q ss_pred CCCEEEEccccCcCCHHHHHHHHHHHHHHcC-CceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 833 GAQVLCLKDMAGLLKPTAAKLLIGSFREKYP-NILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 833 Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
|+|.|.. .| |...+-...+.++.+++..+ ++||-.=.=-.. ...+++.+++||+.|-++
T Consensus 145 Gad~I~t-st-g~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t---~~da~~~l~aGA~~iG~s 204 (225)
T 1mzh_A 145 GADFIKT-ST-GFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRD---LETAISMIEAGADRIGTS 204 (225)
T ss_dssp TCSEEEC-CC-SCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCS---HHHHHHHHHTTCSEEEES
T ss_pred CCCEEEE-CC-CCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCC---HHHHHHHHHhCchHHHHc
Confidence 9999932 33 32221122234455555542 577654332222 366777788999977443
No 341
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=81.39 E-value=31 Score=40.44 Aligned_cols=130 Identities=18% Similarity=0.115 Sum_probs=83.3
Q ss_pred hHHHHHHHHHhc--CCCEEEEeccCC---------hHHHHHHHHHHHHHh--------cCCCcEEEEEEEeeccCCCCCC
Q psy15244 754 EVGAFCRLASQA--GIDIFRVFDPLN---------SVPNLVKGMDAVQQV--------TGGSTIVEATICYAGDLTNPNK 814 (1427)
Q Consensus 754 vv~~~v~~a~~~--Gid~~rif~~~n---------d~~~~~~~i~~a~~~--------G~~~~~v~~~i~~t~d~~~p~~ 814 (1427)
....+++.+... +.|.|-|-.++- +.+.+.+.++.++++ .. -+.+ -. .|+
T Consensus 162 ~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~---Pv~v--Ki-----~p~- 230 (367)
T 3zwt_A 162 AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRP---AVLV--KI-----APD- 230 (367)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCC---EEEE--EE-----CSC-
T ss_pred CHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCc---eEEE--Ee-----CCC-
Confidence 355555544443 478888776643 234555666655543 22 1211 11 443
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEcccc---------------CcCC----HHHHHHHHHHHHHHcC-CceEEEeecCC
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMA---------------GLLK----PTAAKLLIGSFREKYP-NILIHVHTHDM 874 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~---------------G~l~----P~~~~~lv~~lr~~~p-~ipi~~H~Hnd 874 (1427)
.+.+.+.++++.++++|+|.|.+-.|. |.+. +....++|+.+++.++ ++||-.=.-=.
T Consensus 231 --~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~ 308 (367)
T 3zwt_A 231 --LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS 308 (367)
T ss_dssp --CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC
T ss_pred --CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC
Confidence 567889999999999999999987664 2222 2335688999999986 78876654444
Q ss_pred cchHHHHHHHHHHhcCCEEEecccc
Q psy15244 875 AGTGVATTLACVKAGADIVDVAADS 899 (1427)
Q Consensus 875 ~GlA~An~laAi~AGad~VD~av~G 899 (1427)
.+ ..+.+++++|||.|...-.=
T Consensus 309 s~---~da~~~l~~GAd~V~vgra~ 330 (367)
T 3zwt_A 309 SG---QDALEKIRAGASLVQLYTAL 330 (367)
T ss_dssp SH---HHHHHHHHHTCSEEEESHHH
T ss_pred CH---HHHHHHHHcCCCEEEECHHH
Confidence 33 45677778999999876543
No 342
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=81.29 E-value=5.9 Score=43.38 Aligned_cols=122 Identities=16% Similarity=0.198 Sum_probs=73.3
Q ss_pred cchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15244 752 PAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVE 831 (1427)
Q Consensus 752 ~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~ 831 (1427)
+|.+..+++.+.+.|+|.+.+..... .+.|+.+++.+++.|. .+.+ ++-+ ++++....-.+++..+++...+
T Consensus 77 pnTv~~~~~~~~~~gad~vtvh~~~G-~~~l~~~~~~~~~~g~---~v~v-Lt~~---s~~~~~~~~~~~~~~~a~~a~~ 148 (228)
T 3m47_A 77 PETNEKICRATFKAGADAIIVHGFPG-ADSVRACLNVAEEMGR---EVFL-LTEM---SHPGAEMFIQGAADEIARMGVD 148 (228)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESTTC-HHHHHHHHHHHHHHTC---EEEE-ECCC---CSGGGGTTHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHhCCCCEEEEeccCC-HHHHHHHHHHHHhcCC---CeEE-EEeC---CCccHHHHHHHHHHHHHHHHHH
Confidence 45577789999999999988866543 5678888999988886 4322 2222 3443211113667788888889
Q ss_pred CCCCEEEEccccCcCCHHHHHHHHHHHHHHcCC-ceEEEeecCCcchHH--HHHHHHHHhcCCEEEe
Q psy15244 832 SGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPN-ILIHVHTHDMAGTGV--ATTLACVKAGADIVDV 895 (1427)
Q Consensus 832 ~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~-ipi~~H~Hnd~GlA~--An~laAi~AGad~VD~ 895 (1427)
.|.+-+.. |...|+++. .+|+..|+ .++-. -|.+. ++. .++++|+|++=+
T Consensus 149 ~G~~GvV~----~at~~~e~~----~ir~~~~~~~~iv~-----PGI~~~g~~p-~~~~aGad~iVv 201 (228)
T 3m47_A 149 LGVKNYVG----PSTRPERLS----RLREIIGQDSFLIS-----PGVGAQGGDP-GETLRFADAIIV 201 (228)
T ss_dssp TTCCEEEC----CSSCHHHHH----HHHHHHCSSSEEEE-----CC----------CGGGTCSEEEE
T ss_pred hCCcEEEE----CCCChHHHH----HHHHhcCCCCEEEe-----cCcCcCCCCH-hHHHcCCCEEEE
Confidence 99986442 334566554 45555543 44311 12111 245 889999997644
No 343
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=81.23 E-value=7.6 Score=42.97 Aligned_cols=92 Identities=13% Similarity=0.152 Sum_probs=57.7
Q ss_pred EEEEEc-CCHHHHHHHHHHHHc-CCEEEEEecCCCccCcc-ccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEE
Q psy15244 59 KILIAN-RSEVAIRVARACNEM-GIKSVGIYSEQDKFSAH-RTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIH 135 (1427)
Q Consensus 59 kVLIag-rGeia~riiraa~el-Gi~~vav~s~~d~~s~~-~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~ 135 (1427)
||+|+| .|.++..+++++.+. |++++++....+..... ...+|-.+... .| ......+..|.+++++.|+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT---~p----~a~~~~~~~a~~~g~~~Vi 74 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFT---HP----DVVMGNLEFLIDNGIHAVV 74 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECS---CT----TTHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEcc---Ch----HHHHHHHHHHHHcCCCEEE
Confidence 899999 599999999999876 99998776543321111 11345443332 11 2356777788888888888
Q ss_pred eCCCcccccH-HHHHHHHHC-CCc
Q psy15244 136 PGYGFLSERE-DFAKAVIGA-GLE 157 (1427)
Q Consensus 136 pg~gflsE~~-~~a~~~e~~-Gi~ 157 (1427)
-..|+..|.. .+.+++++. +++
T Consensus 75 gTTG~~~e~~~~l~~aa~~~~~~~ 98 (245)
T 1p9l_A 75 GTTGFTAERFQQVESWLVAKPNTS 98 (245)
T ss_dssp CCCCCCHHHHHHHHHHHHTSTTCE
T ss_pred cCCCCCHHHHHHHHHHHHhCCCCC
Confidence 6667554422 344455544 554
No 344
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=81.14 E-value=16 Score=38.75 Aligned_cols=109 Identities=18% Similarity=0.172 Sum_probs=66.3
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHHh--cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccc
Q psy15244 765 AGIDIFRVFDPLNSVPNLVKGMDAVQQV--TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDM 842 (1427)
Q Consensus 765 ~Gid~~rif~~~nd~~~~~~~i~~a~~~--G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt 842 (1427)
.|+|++-+-.+.+ +..-...++.+++. +. .+...+.+. ...++ .++.+.++|+|.+.+-+.
T Consensus 24 ~~~diie~G~p~~-~~~g~~~i~~ir~~~~~~---~i~~~~~~~----------~~~~~---~~~~~~~~Gad~v~v~~~ 86 (211)
T 3f4w_A 24 DDVDIIEVGTPFL-IREGVNAIKAIKEKYPHK---EVLADAKIM----------DGGHF---ESQLLFDAGADYVTVLGV 86 (211)
T ss_dssp GGCSEEEECHHHH-HHHTTHHHHHHHHHCTTS---EEEEEEEEC----------SCHHH---HHHHHHHTTCSEEEEETT
T ss_pred cCccEEEeCcHHH-HhccHHHHHHHHHhCCCC---EEEEEEEec----------cchHH---HHHHHHhcCCCEEEEeCC
Confidence 5888877765321 22223456666665 44 443333332 22333 377888999999999876
Q ss_pred cCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 843 AGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 843 ~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
.+ .....++++.+++. ++++.+-.++- ......+..+.++|+|+|-+.
T Consensus 87 ~~---~~~~~~~~~~~~~~--g~~~~v~~~~~-~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 87 TD---VLTIQSCIRAAKEA--GKQVVVDMICV-DDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp SC---HHHHHHHHHHHHHH--TCEEEEECTTC-SSHHHHHHHHHHHTCCEEEEE
T ss_pred CC---hhHHHHHHHHHHHc--CCeEEEEecCC-CCHHHHHHHHHHcCCCEEEEc
Confidence 53 45667888888765 56665433321 123445678889999998543
No 345
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=81.01 E-value=3.1 Score=46.65 Aligned_cols=72 Identities=13% Similarity=-0.033 Sum_probs=48.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcC-CEEEEEecCCCccCcccccc--c-eEEEcCCCCCcccCCCCHHHHHHHHHhcCC
Q psy15244 57 MEKILIANR-SEVAIRVARACNEMG-IKSVGIYSEQDKFSAHRTKV--D-QAFLVGKGMPPVAAYLNIPEIICIAKNNNV 131 (1427)
Q Consensus 57 ~kkVLIagr-Geia~riiraa~elG-i~~vav~s~~d~~s~~~~~a--D-e~~~i~~~~~~~~~yldi~~Ii~ia~~~~v 131 (1427)
+++|||.|. |.++..+++.+.+.| ++++++..+++.... ..+. . +.+. .++.|.+.+.++.+ ++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-~~l~~~~~~~~~--------~D~~d~~~l~~~~~--~~ 73 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-KELRLQGAEVVQ--------GDQDDQVIMELALN--GA 73 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-HHHHHTTCEEEE--------CCTTCHHHHHHHHT--TC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-HHHHHCCCEEEE--------ecCCCHHHHHHHHh--cC
Confidence 579999994 999999999999999 999888765543110 0010 1 1222 23566777777665 58
Q ss_pred CEEEeCCC
Q psy15244 132 DAIHPGYG 139 (1427)
Q Consensus 132 DaI~pg~g 139 (1427)
|.|+-..+
T Consensus 74 d~vi~~a~ 81 (299)
T 2wm3_A 74 YATFIVTN 81 (299)
T ss_dssp SEEEECCC
T ss_pred CEEEEeCC
Confidence 99887655
No 346
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=80.99 E-value=9.5 Score=44.37 Aligned_cols=71 Identities=24% Similarity=0.324 Sum_probs=56.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccccC-----------cCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHH
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKDMAG-----------LLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLAC 885 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~Dt~G-----------~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laA 885 (1427)
.+.+.+.+.++++.+.|++.|.+.-+-| .+.++....++...++. ++++.+|+|.+.+ ...+
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~~~-----i~~~ 236 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA--GIKVAAHAHGASG-----IREA 236 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT--TCEEEEEECSHHH-----HHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEeCCHHH-----HHHH
Confidence 5678889999999999999988875433 47888888888888765 7999999987643 4567
Q ss_pred HHhcCCEEE
Q psy15244 886 VKAGADIVD 894 (1427)
Q Consensus 886 i~AGad~VD 894 (1427)
+++|++.+.
T Consensus 237 ~~~g~~~i~ 245 (403)
T 3gnh_A 237 VRAGVDTIE 245 (403)
T ss_dssp HHTTCSEEE
T ss_pred HHhCCCEEe
Confidence 889988654
No 347
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=80.75 E-value=5.9 Score=44.76 Aligned_cols=133 Identities=17% Similarity=0.143 Sum_probs=90.9
Q ss_pred EEEEEEeeccCCCCCCC---CCCHHHHHHHHHHHHHCCCCEEEE----ccccCcCCHHHHHHHHHHHHHHcCCceEEEee
Q psy15244 799 VEATICYAGDLTNPNKK---KYSLNYYEDLAKQLVESGAQVLCL----KDMAGLLKPTAAKLLIGSFREKYPNILIHVHT 871 (1427)
Q Consensus 799 v~~~i~~t~d~~~p~~~---~~~~~~~~~~a~~l~~~Gad~i~i----~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~ 871 (1427)
+-.+.+-||-...++.+ ..+++.+.+-+.++.++||.++-+ .|-...+.|....+++.++|++.|++.|.+-+
T Consensus 10 viIt~A~tGa~~t~~~~P~lPvTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TT 89 (282)
T 2y7e_A 10 LILTAAITGAETTRADQPNLPITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQIST 89 (282)
T ss_dssp BCEEEECSCSSCCTTTCTTCCCSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred eEEEEccCCCCCCcccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCC
Confidence 34455667655333332 369999999999999999976544 44456789999999999999998899999988
Q ss_pred cCCcchHHHHHHHHHHhcCCEEEeccccCCCCC---CCC--cHHHHHHHHHhCCCCCC---CChhhHH
Q psy15244 872 HDMAGTGVATTLACVKAGADIVDVAADSMSGIC---SQP--AMGTIVSCLENTDKRCG---IDLHDVC 931 (1427)
Q Consensus 872 Hnd~GlA~An~laAi~AGad~VD~av~GmG~~t---gn~--~lE~vv~~L~~~g~~tg---idl~~L~ 931 (1427)
.-..+....--++.++..-++...+++.|--.. -|+ .++.++..++..|..+. +|...|.
T Consensus 90 g~~~~~~~eeR~~~~~~~Pe~asl~~gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~ 157 (282)
T 2y7e_A 90 GGAVGESFDKRLAPLALKPEMATLNAGTLNFGDDIFINHPADIIRLAEAFKQYNVVPEVEVYESGMVD 157 (282)
T ss_dssp SCSTTCCHHHHHGGGGGCCSEEEEECCCEEETTEEECCCHHHHHHHHHHHHHTTCEEEEEECSHHHHH
T ss_pred CCCCCCCHHHHHHHhhcCCCEEEecccccccccccccCCHHHHHHHHHHHHHcCCeEEEEEECHHHHH
Confidence 655443556666666667788766654432211 132 46788888888776543 4553333
No 348
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=80.68 E-value=5.6 Score=44.92 Aligned_cols=121 Identities=13% Similarity=0.074 Sum_probs=74.0
Q ss_pred HHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q psy15244 759 CRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLC 838 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~ 838 (1427)
++.+.+. +|++.|-... ++|.. .++++...|+ -+ +.-+|- -.+++.+...++.+.+.|.+.|.
T Consensus 104 v~~l~~~-vd~lqIgA~~--~~n~~-LLr~va~~gk---PV---ilK~G~-------~~t~~ei~~ave~i~~~Gn~~i~ 166 (285)
T 3sz8_A 104 AAPVAEI-ADVLQVPAFL--ARQTD-LVVAIAKAGK---PV---NVKKPQ-------FMSPTQLKHVVSKCGEVGNDRVM 166 (285)
T ss_dssp HHHHHTT-CSEEEECGGG--TTCHH-HHHHHHHTSS---CE---EEECCT-------TSCGGGTHHHHHHHHHTTCCCEE
T ss_pred HHHHHHh-CCEEEECccc--cCCHH-HHHHHHccCC---cE---EEeCCC-------CCCHHHHHHHHHHHHHcCCCcEE
Confidence 4555566 8877775532 22222 3334445677 22 222320 14677778888899999998888
Q ss_pred EccccCcCCHHHH----HHHHHHHHHHcCCceEEE-eecCC----------cc---hHHHHHHHHHHhcCC--EEEecc
Q psy15244 839 LKDMAGLLKPTAA----KLLIGSFREKYPNILIHV-HTHDM----------AG---TGVATTLACVKAGAD--IVDVAA 897 (1427)
Q Consensus 839 i~Dt~G~l~P~~~----~~lv~~lr~~~p~ipi~~-H~Hnd----------~G---lA~An~laAi~AGad--~VD~av 897 (1427)
|+.-.-.. |..- ..-+..+|+.+|++||.+ ++|-. .| +-...++||+.+||+ +|+.=.
T Consensus 167 L~erg~~y-~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~ 244 (285)
T 3sz8_A 167 LCERGSSF-GYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHP 244 (285)
T ss_dssp EEECCEEC-SSSCEECCTTHHHHHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEES
T ss_pred EEeCCCCC-CCCcCccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEecc
Confidence 87643221 2211 223667898987799999 88863 23 226678899999999 776544
No 349
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=80.68 E-value=5.1 Score=45.81 Aligned_cols=69 Identities=13% Similarity=0.050 Sum_probs=46.5
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCE
Q psy15244 55 KTMEKILIANR-SEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDA 133 (1427)
Q Consensus 55 ~~~kkVLIagr-Geia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDa 133 (1427)
...++|||.|. |.++..+++.+.+.|++++++....... . -+.+. .+..+.+.+.++++ ++|+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-----~-~~~~~--------~Dl~d~~~~~~~~~--~~d~ 80 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGT-----G-GEEVV--------GSLEDGQALSDAIM--GVSA 80 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSS-----C-CSEEE--------SCTTCHHHHHHHHT--TCSE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCC-----C-ccEEe--------cCcCCHHHHHHHHh--CCCE
Confidence 34679999995 9999999999999999999887654420 0 01222 23456777777766 7998
Q ss_pred EEeCCC
Q psy15244 134 IHPGYG 139 (1427)
Q Consensus 134 I~pg~g 139 (1427)
|+-.-+
T Consensus 81 vih~A~ 86 (347)
T 4id9_A 81 VLHLGA 86 (347)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886543
No 350
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=80.60 E-value=8.3 Score=44.03 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=63.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHH-----HhcC
Q psy15244 57 MEKILIANR-SEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIA-----KNNN 130 (1427)
Q Consensus 57 ~kkVLIagr-Geia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia-----~~~~ 130 (1427)
|.||.|+|- |.++.+.++++++.+.+++++++...... .+.+.+ .....|.+.+++++.+ ...+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~----~~~~~~------~~~~~~~~~~~ll~~~~~l~~~~~~ 72 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVG----LVDSFF------PEAEFFTEPEAFEAYLEDLRDRGEG 72 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG----GGGGTC------TTCEEESCHHHHHHHHHHHHHTTCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH----HHHhhC------CCCceeCCHHHHHHHhhhhcccCCC
Confidence 569999997 77999999999999999998875433211 111111 1234577888888765 4578
Q ss_pred CCEEEeCCCcccccHHHHHHHHHCCCcee
Q psy15244 131 VDAIHPGYGFLSEREDFAKAVIGAGLEFI 159 (1427)
Q Consensus 131 vDaI~pg~gflsE~~~~a~~~e~~Gi~fi 159 (1427)
+|+|+-..-. ....+++..+.++|..++
T Consensus 73 vD~V~I~tP~-~~H~~~~~~al~aGkhVl 100 (312)
T 3o9z_A 73 VDYLSIASPN-HLHYPQIRMALRLGANAL 100 (312)
T ss_dssp CSEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred CcEEEECCCc-hhhHHHHHHHHHCCCeEE
Confidence 9999866432 234566777777787655
No 351
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=80.56 E-value=2.7 Score=49.31 Aligned_cols=84 Identities=19% Similarity=0.190 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHCCCCEEEEcc-ccCcCCHHH--------HHHHHHHHH-HHcC----CceEEEeecCCcchHHHHHHHHH
Q psy15244 821 YYEDLAKQLVESGAQVLCLKD-MAGLLKPTA--------AKLLIGSFR-EKYP----NILIHVHTHDMAGTGVATTLACV 886 (1427)
Q Consensus 821 ~~~~~a~~l~~~Gad~i~i~D-t~G~l~P~~--------~~~lv~~lr-~~~p----~ipi~~H~Hnd~GlA~An~laAi 886 (1427)
...++++...++|||.|.|.| .+|.+.|.. ..++++.++ +..| ++|+.+|+.++ +.-+. .-.
T Consensus 198 ~~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~-~~~l~---~l~ 273 (367)
T 1r3s_A 198 ALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-HFALE---ELA 273 (367)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC-GGGHH---HHT
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc-HHHHH---HHH
Confidence 455677777889999999998 566778865 345567777 5544 58999998876 43222 334
Q ss_pred HhcCCEEEeccccCCCCCCCCcHHHHHHHH
Q psy15244 887 KAGADIVDVAADSMSGICSQPAMGTIVSCL 916 (1427)
Q Consensus 887 ~AGad~VD~av~GmG~~tgn~~lE~vv~~L 916 (1427)
+.|+|+++.-. ..++.++...+
T Consensus 274 ~~g~d~i~~d~--------~~dl~~a~~~~ 295 (367)
T 1r3s_A 274 QAGYEVVGLDW--------TVAPKKARECV 295 (367)
T ss_dssp TSSCSEEECCT--------TSCHHHHHHHH
T ss_pred hcCCCEEEeCC--------CCCHHHHHHHc
Confidence 68999986531 24566655544
No 352
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=80.53 E-value=24 Score=40.50 Aligned_cols=207 Identities=16% Similarity=0.194 Sum_probs=108.5
Q ss_pred eEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHH----HHHhCCCCc
Q psy15244 659 ILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAE----LRELIPNIP 734 (1427)
Q Consensus 659 v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~----lr~~~p~~~ 734 (1427)
+.+|--+|=||.+. ++.+..++.|..+-+ .|.+.|++||-+|--.+-.--.++.|+|+.. |++.. +++
T Consensus 16 lNvTPDSFsdgg~~-----~~~~~a~~~a~~~v~--~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-~vp 87 (314)
T 2vef_A 16 INVTPDSFSDGGQF-----FALEQALQQARKLIA--EGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-DVL 87 (314)
T ss_dssp EECCC--------------CHHHHHHHHHHHHHH--TTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-CCE
T ss_pred EeCCCCCCCCCCCC-----CCHHHHHHHHHHHHH--CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-Cce
Confidence 34555557788752 467888888888877 7999999998554221111112345666543 34332 444
Q ss_pred eeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCC
Q psy15244 735 FQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNK 814 (1427)
Q Consensus 735 ~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~ 814 (1427)
++.= .+ .-+.+++|+++|.++|.=....+.-++| .+.+++.|. -+ .++....-+.|..
T Consensus 88 iSID----------T~----~~~Va~aAl~aGa~iINDVsg~~~d~~m---~~v~a~~~~---~v--vlmh~~~~g~p~~ 145 (314)
T 2vef_A 88 ISID----------TW----KSQVAEAALAAGADLVNDITGLMGDEKM---PHVVAEARA---QV--VIMFNPVMARPQH 145 (314)
T ss_dssp EEEE----------CS----CHHHHHHHHHTTCCEEEETTTTCSCTTH---HHHHHHHTC---EE--EEECCHHHHCTTS
T ss_pred EEEe----------CC----CHHHHHHHHHcCCCEEEECCCCCCChHH---HHHHHHcCC---CE--EEEecCCCCCCCC
Confidence 4431 12 2334778888999998655444321333 344566776 22 1121100001211
Q ss_pred CC--------------------C------C--HHHHHHHHHHHHHCCCC--EEEEccc-cCc-CCHHHHHHHHHHHHHHc
Q psy15244 815 KK--------------------Y------S--LNYYEDLAKQLVESGAQ--VLCLKDM-AGL-LKPTAAKLLIGSFREKY 862 (1427)
Q Consensus 815 ~~--------------------~------~--~~~~~~~a~~l~~~Gad--~i~i~Dt-~G~-l~P~~~~~lv~~lr~~~ 862 (1427)
.. | + .+++.+.++.+.++|+. .|. -|. .|. -+.++-.++++.|++-.
T Consensus 146 ~~~~~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~Ii-lDPGiGF~kt~~~nl~ll~~l~~l~ 224 (314)
T 2vef_A 146 PSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENIL-LDPGIGFGLTKKENLLLLRDLDKLH 224 (314)
T ss_dssp TTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEE-EECCTTSSCCHHHHHHHHHTHHHHH
T ss_pred cccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEE-EeCCCCcccchHHHHHHHHHHHHhh
Confidence 00 0 0 34566777888889984 454 465 343 34456777888887653
Q ss_pred -CCceEEEeecCC------------------------cchH-HHHHHHHHHhcCCEEEec
Q psy15244 863 -PNILIHVHTHDM------------------------AGTG-VATTLACVKAGADIVDVA 896 (1427)
Q Consensus 863 -p~ipi~~H~Hnd------------------------~GlA-~An~laAi~AGad~VD~a 896 (1427)
++.|+-+=.-|- ...+ .|.+..|++.||++|.+-
T Consensus 225 ~~g~PvL~G~SrKsfig~~~~~~g~~~~p~tel~~~~R~~~t~a~~~~a~~~Ga~IvRvH 284 (314)
T 2vef_A 225 QKGYPIFLGVSRKRFVINILEENGFEVNPETELGFRNRDTASAHVTSIAARQGVEVVRVH 284 (314)
T ss_dssp TTSSCBEEECSSCHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHHHHHTTCSEEEES
T ss_pred cCCCCEEEEeCccHHHhhhhccccccCCcccccchhhhhHHHHHHHHHHHHcCCcEEEeC
Confidence 578865533331 1122 345567889999998764
No 353
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=80.53 E-value=24 Score=38.88 Aligned_cols=157 Identities=12% Similarity=0.096 Sum_probs=106.4
Q ss_pred CCcchHHHHHHHHHhcCCCEEEEeccCChH---HHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCC-CCCCCHHHHHHH
Q psy15244 750 YSPAEVGAFCRLASQAGIDIFRVFDPLNSV---PNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPN-KKKYSLNYYEDL 825 (1427)
Q Consensus 750 ~~~nvv~~~v~~a~~~Gid~~rif~~~nd~---~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~-~~~~~~~~~~~~ 825 (1427)
++....+.+++.|.+. ||.+.+.-..+.+ +.+++-|+.++++|. . .|+|...-+. -.+- .+-++
T Consensus 23 lg~~~~~d~Le~~g~y-ID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV---~-----v~~GGTl~E~~~~qg---~~~~y 90 (251)
T 1qwg_A 23 LPPKFVEDYLKVCGDY-IDFVKFGWGTSAVIDRDVVKEKINYYKDWGI---K-----VYPGGTLFEYAYSKG---KFDEF 90 (251)
T ss_dssp CCHHHHHHHHHHHGGG-CSEEEECTTGGGGSCHHHHHHHHHHHHTTTC---E-----EEECHHHHHHHHHTT---CHHHH
T ss_pred CCHHHHHHHHHHhhhh-cceEEecCceeeecCHHHHHHHHHHHHHcCC---e-----EECCcHHHHHHHHcC---cHHHH
Confidence 4555566677665554 9999998777754 579999999999998 3 2444311111 0112 34455
Q ss_pred HHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHH-cCCceEEEeec-------CCcchHHHHHHHHHHhcCCEEEecc
Q psy15244 826 AKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREK-YPNILIHVHTH-------DMAGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 826 a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~-~p~ipi~~H~H-------nd~GlA~An~laAi~AGad~VD~av 897 (1427)
.+.+.+.|.+.|-|.|-.--+.++.-.++|+.+++. + .+--++..- .+...-+..+...++|||+.|=+=-
T Consensus 91 l~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~-~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEa 169 (251)
T 1qwg_A 91 LNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGF-MVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEG 169 (251)
T ss_dssp HHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTC-EEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCC-EEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEee
Confidence 556667799999999999999999999999999987 3 222233322 2334556677889999999875544
Q ss_pred c------cCCCCCCCCcHHHHHHHHHhC
Q psy15244 898 D------SMSGICSQPAMGTIVSCLENT 919 (1427)
Q Consensus 898 ~------GmG~~tgn~~lE~vv~~L~~~ 919 (1427)
- |+=+..|+.-...+-..+...
T Consensus 170 rEsG~~iGi~~~~g~~r~d~v~~i~~~l 197 (251)
T 1qwg_A 170 RESGKGKGLFDKEGKVKENELDVLAKNV 197 (251)
T ss_dssp TTTCCSSTTBCTTSCBCHHHHHHHHTTS
T ss_pred ecccCCcccCCCCCCCcHHHHHHHHHhC
Confidence 3 666777888877665555443
No 354
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=80.45 E-value=13 Score=42.08 Aligned_cols=99 Identities=16% Similarity=0.150 Sum_probs=80.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHc-CCceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKY-PNILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~-p~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+| .|+.++-.++++...+.. +.+||-.|+ +|+..-++..+..|.++|
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 96 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLG 96 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999 478888899999988876 368888876 678888889999999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..--+. .|+-+.++..++
T Consensus 97 adavlv~~P~y~----~~~~~~l~~~f~ 120 (291)
T 3tak_A 97 ADAALLVTPYYN----KPTQEGLYQHYK 120 (291)
T ss_dssp CSEEEEECCCSS----CCCHHHHHHHHH
T ss_pred CCEEEEcCCCCC----CCCHHHHHHHHH
Confidence 999866543332 245566666655
No 355
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=80.42 E-value=57 Score=35.80 Aligned_cols=135 Identities=8% Similarity=-0.009 Sum_probs=76.7
Q ss_pred chHHHHHHHHHhcCCCEEEEec----cC-------Ch-------HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCC
Q psy15244 753 AEVGAFCRLASQAGIDIFRVFD----PL-------NS-------VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNK 814 (1427)
Q Consensus 753 nvv~~~v~~a~~~Gid~~rif~----~~-------nd-------~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~ 814 (1427)
+..+..++.|.+.|++.+.+.. .. +. .+.+....+.+++.|. .+ ++..... .+..
T Consensus 88 ~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv---~l--~lEn~~~--~~~~ 160 (290)
T 2qul_A 88 EYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGI---IY--ALEVVNR--FEQW 160 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTC---EE--EEECCCT--TTCS
T ss_pred HHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCC---EE--EEEeCcc--cccc
Confidence 4466788889999999988642 11 11 2456667777888887 22 2222110 0111
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEE-EEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEE
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVL-CLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIV 893 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i-~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~V 893 (1427)
.-.+.+.+.++++.+ |...+ ..-|+.=...- -.+....+++. .+--.++|.||..+
T Consensus 161 ~~~~~~~~~~l~~~~---~~~~~g~~~D~~h~~~~--g~d~~~~l~~~-~~~i~~vH~~D~~~----------------- 217 (290)
T 2qul_A 161 LCNDAKEAIAFADAV---DSPACKVQLDTFHMNIE--ETSFRDAILAC-KGKMGHFHLGEANR----------------- 217 (290)
T ss_dssp SCCSHHHHHHHHHHH---CCTTEEEEEEHHHHHHH--CSCHHHHHHHT-TTTEEEEEECCTTS-----------------
T ss_pred ccCCHHHHHHHHHHc---CCCCEEEEEEchhhhhc--CCCHHHHHHHH-HhheeEEEEccCCC-----------------
Confidence 235777777777554 33222 23366322110 01223334433 35567999998742
Q ss_pred EeccccCCCCCCCCcHHHHHHHHHhCCCCC
Q psy15244 894 DVAADSMSGICSQPAMGTIVSCLENTDKRC 923 (1427)
Q Consensus 894 D~av~GmG~~tgn~~lE~vv~~L~~~g~~t 923 (1427)
..+| .|..+...++..|+..|++-
T Consensus 218 ----~~~G--~G~id~~~~~~~L~~~gy~g 241 (290)
T 2qul_A 218 ----LPPG--EGRLPWDEIFGALKEIGYDG 241 (290)
T ss_dssp ----CCTT--SSCSCHHHHHHHHHHTTCCS
T ss_pred ----CCCC--CCCcCHHHHHHHHHHhCCCc
Confidence 1233 47789999999999887753
No 356
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=80.38 E-value=16 Score=42.40 Aligned_cols=74 Identities=15% Similarity=0.112 Sum_probs=48.7
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 56 TMEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 56 ~~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
++++|||.| .|.++..+++.+.+.|++++++..............-+.+. .+..+.+.+.++.+ ++|+|
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~--------~Dl~d~~~~~~~~~--~~d~V 97 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHL--------VDLRVMENCLKVTE--GVDHV 97 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEE--------CCTTSHHHHHHHHT--TCSEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEE--------CCCCCHHHHHHHhC--CCCEE
Confidence 467999999 49999999999999999998887654432111000011222 12455667766664 79988
Q ss_pred EeCCC
Q psy15244 135 HPGYG 139 (1427)
Q Consensus 135 ~pg~g 139 (1427)
+-..+
T Consensus 98 ih~A~ 102 (379)
T 2c5a_A 98 FNLAA 102 (379)
T ss_dssp EECCC
T ss_pred EECce
Confidence 86655
No 357
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=80.36 E-value=9.4 Score=43.09 Aligned_cols=94 Identities=15% Similarity=0.144 Sum_probs=59.2
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCC-CccCccc--c---c-cceEEEcCCCCCcccCCCCHHHHHHHHH
Q psy15244 56 TMEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQ-DKFSAHR--T---K-VDQAFLVGKGMPPVAAYLNIPEIICIAK 127 (1427)
Q Consensus 56 ~~kkVLIag-rGeia~riiraa~elGi~~vav~s~~-d~~s~~~--~---~-aDe~~~i~~~~~~~~~yldi~~Ii~ia~ 127 (1427)
+|++|||.| .|.++..+++.+.+.|++++++..+. +...... . + ......+ ..++.|.+.+.++.+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v------~~D~~d~~~l~~a~~ 76 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTII------EGEMEEHEKMVSVLK 76 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEE------ECCTTCHHHHHHHHT
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEE------EecCCCHHHHHHHHc
Confidence 466899999 59999999999999999988886554 2100000 0 0 0111111 124567778777776
Q ss_pred hcCCCEEEeCCCccc--ccHHHHHHHHHCC-Cc
Q psy15244 128 NNNVDAIHPGYGFLS--EREDFAKAVIGAG-LE 157 (1427)
Q Consensus 128 ~~~vDaI~pg~gfls--E~~~~a~~~e~~G-i~ 157 (1427)
++|+|+-..+... ....+.+++.+.| +.
T Consensus 77 --~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 107 (321)
T 3c1o_A 77 --QVDIVISALPFPMISSQIHIINAIKAAGNIK 107 (321)
T ss_dssp --TCSEEEECCCGGGSGGGHHHHHHHHHHCCCC
T ss_pred --CCCEEEECCCccchhhHHHHHHHHHHhCCcc
Confidence 4899987765421 2235777888877 64
No 358
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=80.33 E-value=13 Score=41.95 Aligned_cols=151 Identities=14% Similarity=0.142 Sum_probs=91.7
Q ss_pred cchHHHHHHHHHhc--CCCEEEEeccCChHHHHHHHHHHHHHhcCC-CcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHH
Q psy15244 752 PAEVGAFCRLASQA--GIDIFRVFDPLNSVPNLVKGMDAVQQVTGG-STIVEATICYAGDLTNPNKKKYSLNYYEDLAKQ 828 (1427)
Q Consensus 752 ~nvv~~~v~~a~~~--Gid~~rif~~~nd~~~~~~~i~~a~~~G~~-~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~ 828 (1427)
...+++.+++|.+. |+..+-|. .+++....+ ..+..|.. ...+... + +-|.. ..+.+--+.-++.
T Consensus 47 ~~dI~~lc~eA~~~~~~~aaVCV~--p~~V~~a~~---~L~~~gs~~~v~v~tV---i---gFP~G-~~~~~~Kv~E~~~ 114 (281)
T 2a4a_A 47 EDDIRELCNESVKTCPFAAAVCVY--PKFVKFINE---KIKQEINPFKPKIACV---I---NFPYG-TDSMEKVLNDTEK 114 (281)
T ss_dssp HHHHHHHHHHHHSSSSCCSEEEEC--GGGHHHHHH---HHHHHSSSCCSEEEEE---E---STTTC-CSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCccEEEEC--HHHHHHHHH---HhhccCCCCCceEEEE---e---CCCCC-CCCHHHHHHHHHH
Confidence 33467789999998 88877544 344444333 33321210 1133222 2 24432 4677777777888
Q ss_pred HHHCCCCEEEEccccCcCC---HH---HHHHHHHHHHHHcCCce----EEEeecCCcchHHHHHHHHHHhcCCEEEeccc
Q psy15244 829 LVESGAQVLCLKDMAGLLK---PT---AAKLLIGSFREKYPNIL----IHVHTHDMAGTGVATTLACVKAGADIVDVAAD 898 (1427)
Q Consensus 829 l~~~Gad~i~i~Dt~G~l~---P~---~~~~lv~~lr~~~p~ip----i~~H~Hnd~GlA~An~laAi~AGad~VD~av~ 898 (1427)
+++.|||.|-+.=-.|.++ -. .+++-|.++++..++.+ |+.-.=+|.-.=...+..|+++|||+|-|+.
T Consensus 115 Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTST- 193 (281)
T 2a4a_A 115 ALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTST- 193 (281)
T ss_dssp HHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCC-
T ss_pred HHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCC-
Confidence 9999999887765666544 34 67778888888765544 2222223333223566788999999999885
Q ss_pred cCCCCCCCCcHHHHHHHHH
Q psy15244 899 SMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 899 GmG~~tgn~~lE~vv~~L~ 917 (1427)
|+ .+|++.+|++-.+.+
T Consensus 194 Gf--~~~gAT~edv~lm~~ 210 (281)
T 2a4a_A 194 GK--VQINATPSSVEYIIK 210 (281)
T ss_dssp SC--SSCCCCHHHHHHHHH
T ss_pred CC--CCCCCCHHHHHHHHH
Confidence 33 246777777665554
No 359
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=80.26 E-value=12 Score=42.56 Aligned_cols=79 Identities=18% Similarity=0.131 Sum_probs=51.0
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 56 TMEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 56 ~~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
.+++|||.| .|.++..+++.+.+.|++++++..............+....+. .+..+.+.+.++.+..++|+|
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~------~Dl~d~~~~~~~~~~~~~D~v 93 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVE------GSIADHALVNQLIGDLQPDAV 93 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEE------CCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEE------EeCCCHHHHHHHHhccCCcEE
Confidence 367999998 7999999999999999999888654332111000001111111 134567777777776679998
Q ss_pred EeCCCc
Q psy15244 135 HPGYGF 140 (1427)
Q Consensus 135 ~pg~gf 140 (1427)
+-.-+.
T Consensus 94 ih~A~~ 99 (333)
T 2q1w_A 94 VHTAAS 99 (333)
T ss_dssp EECCCC
T ss_pred EECcee
Confidence 866543
No 360
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=80.15 E-value=29 Score=40.63 Aligned_cols=115 Identities=16% Similarity=0.172 Sum_probs=67.2
Q ss_pred HHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHh--cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHC
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQV--TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVES 832 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~--G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~ 832 (1427)
..+.++.+.++|+|.+.|-.+-.+-+.....++.+++. +. .+-+.-+ .+. +.++.+.++
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v---~Vi~G~v------------~t~----e~A~~a~~a 169 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHL---EIIGGNV------------ATA----EGARALIEA 169 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTC---EEEEEEE------------CSH----HHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCC---ceEeeee------------CCH----HHHHHHHHc
Confidence 34568999999999988754433334555567777776 44 3322211 222 467888899
Q ss_pred CCCEEEEcccc----------CcCCHHHHHHHHHHHHH---HcCCceEEEeecCCcchH-HHHHHHHHHhcCCEEEe
Q psy15244 833 GAQVLCLKDMA----------GLLKPTAAKLLIGSFRE---KYPNILIHVHTHDMAGTG-VATTLACVKAGADIVDV 895 (1427)
Q Consensus 833 Gad~i~i~Dt~----------G~l~P~~~~~lv~~lr~---~~p~ipi~~H~Hnd~GlA-~An~laAi~AGad~VD~ 895 (1427)
|||.|.+.=.. |...|. ..++..+++ .. ++||-.=. |.. ..+..+|+.+||+.|-.
T Consensus 170 GAD~I~vG~gpGs~~~tr~~~g~g~p~--~~~l~~v~~~~~~~-~iPVIA~G----GI~~~~di~kala~GAd~V~v 239 (366)
T 4fo4_A 170 GVSAVKVGIGPGSICTTRIVTGVGVPQ--ITAIADAAGVANEY-GIPVIADG----GIRFSGDISKAIAAGASCVMV 239 (366)
T ss_dssp TCSEEEECSSCSTTBCHHHHHCCCCCH--HHHHHHHHHHHGGG-TCCEEEES----CCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEecCCCCCCCcccccCcccch--HHHHHHHHHHHhhc-CCeEEEeC----CCCCHHHHHHHHHcCCCEEEE
Confidence 99999882001 122332 122333333 33 67765532 332 34667888899998743
No 361
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=80.00 E-value=23 Score=39.67 Aligned_cols=158 Identities=15% Similarity=0.126 Sum_probs=92.1
Q ss_pred HHHHHHHhhcCCccEEeccCCCchhhhhhccccCh------HHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHH
Q psy15244 685 KVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECP------WERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAF 758 (1427)
Q Consensus 685 ~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p------~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~ 758 (1427)
.-|+.+++ +|++.| .-|.+.--+.+.+-+-.| ....+.+++..++.++..=+ ..-|| .-|+++++.
T Consensus 40 ~sA~l~e~--aG~d~i-lvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~---pfgsY-~s~~~a~~~- 111 (275)
T 3vav_A 40 SFAALLDR--ANVDVQ-LIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADL---PFGTY-GTPADAFAS- 111 (275)
T ss_dssp HHHHHHHH--TTCSEE-EECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEEC---CTTSC-SSHHHHHHH-
T ss_pred HHHHHHHH--cCCCEE-EECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEec---CCCCC-CCHHHHHHH-
Confidence 45677788 899999 444332222322222111 33345666666666533221 11248 667776654
Q ss_pred HHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEee-------ccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15244 759 CRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYA-------GDLTNPNKKKYSLNYYEDLAKQLVE 831 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t-------~d~~~p~~~~~~~~~~~~~a~~l~~ 831 (1427)
+.+..+.|++-+.|=+... +...|+.+.++|. -+.+.+-.+ ++|.--.++....+.+++-++.+++
T Consensus 112 a~rl~kaGa~aVklEdg~~----~~~~i~~l~~~GI---pv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~e 184 (275)
T 3vav_A 112 AVKLMRAGAQMVKFEGGEW----LAETVRFLVERAV---PVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEE 184 (275)
T ss_dssp HHHHHHTTCSEEEEECCGG----GHHHHHHHHHTTC---CEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCchh----HHHHHHHHHHCCC---CEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHH
Confidence 4455567999999999853 4455666777898 555554332 1221111111235788888999999
Q ss_pred CCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCce
Q psy15244 832 SGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNIL 866 (1427)
Q Consensus 832 ~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ip 866 (1427)
+||+.|.+- +.|.. +.+.+.+++ ++|
T Consensus 185 AGA~~ivlE-----~vp~~---~a~~It~~l-~iP 210 (275)
T 3vav_A 185 AGAQLIVLE-----AVPTL---VAAEVTREL-SIP 210 (275)
T ss_dssp HTCSEEEEE-----SCCHH---HHHHHHHHC-SSC
T ss_pred cCCCEEEec-----CCCHH---HHHHHHHhC-CCC
Confidence 999999985 33543 556666676 566
No 362
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=79.86 E-value=2.9 Score=47.66 Aligned_cols=43 Identities=21% Similarity=0.155 Sum_probs=26.8
Q ss_pred CCcchHHHHHHHHHhcCCCEEEEeccCC--hHHHHHHHHHHHHHh
Q psy15244 750 YSPAEVGAFCRLASQAGIDIFRVFDPLN--SVPNLVKGMDAVQQV 792 (1427)
Q Consensus 750 ~~~nvv~~~v~~a~~~Gid~~rif~~~n--d~~~~~~~i~~a~~~ 792 (1427)
++.+.+.++++.+.+.|++.|++.|..- ....+...++.+++.
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~ 197 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQE 197 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHh
Confidence 3445566677777777888777777665 234555555555543
No 363
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=79.83 E-value=5.2 Score=48.86 Aligned_cols=70 Identities=23% Similarity=0.340 Sum_probs=54.6
Q ss_pred HHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEecc
Q psy15244 822 YEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 822 ~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av 897 (1427)
+.+.++.+.++|++.|.+-=+.| .|....+.++.+|+.+|++||.+- .++....+..+.++|||.|+++.
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~~p~~pvi~g----~~~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKADYPDLPVVAG----NVATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHHCTTSCEEEE----EECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHHCCCceEEeC----CcCCHHHHHHHHHcCCCEEEEcC
Confidence 45678899999999999833344 566788899999999988998763 24445566888999999999854
No 364
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=79.82 E-value=32 Score=40.17 Aligned_cols=110 Identities=26% Similarity=0.233 Sum_probs=72.8
Q ss_pred HHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q psy15244 760 RLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCL 839 (1427)
Q Consensus 760 ~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i 839 (1427)
..|.+.|+.++.- --+.+.+...++.+++.+.. .+.+.+ . . .+ .+.++.+.++|+|.|.|
T Consensus 64 avA~~GGlgii~~---~~s~e~~~~~I~~vk~~~~~--pvga~i--g----~-----~~----~e~a~~l~eaGad~I~l 123 (361)
T 3khj_A 64 GMARLGGIGIIHK---NMDMESQVNEVLKVKNSGGL--RVGAAI--G----V-----NE----IERAKLLVEAGVDVIVL 123 (361)
T ss_dssp HHHHTTCEEEECS---SSCHHHHHHHHHHHHHTTCC--CCEEEE--C----T-----TC----HHHHHHHHHTTCSEEEE
T ss_pred HHHHcCCCeEEec---CCCHHHHHHHHHHHHhccCc--eEEEEe--C----C-----CH----HHHHHHHHHcCcCeEEE
Confidence 3455667777652 22456666777778776541 222222 1 1 11 57788899999998876
Q ss_pred ccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 840 KDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 840 ~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
|+. ...|....+.++.+|+.+ ++||.+..=. ....+..++++|||.|.++
T Consensus 124 -d~a-~G~~~~~~~~i~~i~~~~-~~~Vivg~v~----t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 124 -DSA-HGHSLNIIRTLKEIKSKM-NIDVIVGNVV----TEEATKELIENGADGIKVG 173 (361)
T ss_dssp -CCS-CCSBHHHHHHHHHHHHHC-CCEEEEEEEC----SHHHHHHHHHTTCSEEEEC
T ss_pred -eCC-CCCcHHHHHHHHHHHHhc-CCcEEEccCC----CHHHHHHHHHcCcCEEEEe
Confidence 333 235677888999999998 8888763222 2455688899999999983
No 365
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=79.78 E-value=16 Score=41.49 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=80.6
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHc-CCceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKY-PNILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~-p~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+| .+++++-.++++...+.. +.+||-.|+ +|+.--++..+..|.++|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 102 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAG 102 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC
Confidence 469999999999999999999999999999 578888889999888876 468888776 578888999999999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..--.- .|+-+.++..++
T Consensus 103 adavlv~~P~y~----~~~~~~l~~~f~ 126 (297)
T 3flu_A 103 ADYTLSVVPYYN----KPSQEGIYQHFK 126 (297)
T ss_dssp CSEEEEECCCSS----CCCHHHHHHHHH
T ss_pred CCEEEECCCCCC----CCCHHHHHHHHH
Confidence 999866543332 245566666665
No 366
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=79.73 E-value=4.7 Score=46.64 Aligned_cols=94 Identities=10% Similarity=0.125 Sum_probs=70.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEe
Q psy15244 816 KYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDV 895 (1427)
Q Consensus 816 ~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~ 895 (1427)
-.|.+-.++-++++.++|+|++++. +-.. +..+-++.+|+.. ++||..-.|-|.-+| ++|+++|+|.+-.
T Consensus 42 T~D~~atv~Qi~~l~~aG~diVRva----vp~~-~~a~al~~I~~~~-~vPlvaDiHf~~~la----l~a~e~G~dklRI 111 (366)
T 3noy_A 42 THDVEATLNQIKRLYEAGCEIVRVA----VPHK-EDVEALEEIVKKS-PMPVIADIHFAPSYA----FLSMEKGVHGIRI 111 (366)
T ss_dssp TTCHHHHHHHHHHHHHTTCCEEEEE----CCSH-HHHHHHHHHHHHC-SSCEEEECCSCHHHH----HHHHHTTCSEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeC----CCCh-HHHHHHHHHHhcC-CCCEEEeCCCCHHHH----HHHHHhCCCeEEE
Confidence 3789999999999999999999984 3343 4567789999998 899999999999888 4599999998633
Q ss_pred ccccCCCCCCCCcHHHHHHHHHhCCCC
Q psy15244 896 AADSMSGICSQPAMGTIVSCLENTDKR 922 (1427)
Q Consensus 896 av~GmG~~tgn~~lE~vv~~L~~~g~~ 922 (1427)
-=.-+|. .-..++|+...+..+..
T Consensus 112 NPGNig~---~~~~~~vv~~ak~~~~p 135 (366)
T 3noy_A 112 NPGNIGK---EEIVREIVEEAKRRGVA 135 (366)
T ss_dssp CHHHHSC---HHHHHHHHHHHHHHTCE
T ss_pred CCcccCc---hhHHHHHHHHHHHcCCC
Confidence 3222321 12346778777776543
No 367
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=79.67 E-value=3.8 Score=46.66 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHHHH-CCCCEEEE----------ccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHH
Q psy15244 818 SLNYYEDLAKQLVE-SGAQVLCL----------KDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACV 886 (1427)
Q Consensus 818 ~~~~~~~~a~~l~~-~Gad~i~i----------~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi 886 (1427)
+.+.+.+.++.+.+ +|+|.|-| .|..| ..|..+.++++++++.+ ++||.+..--+......-+..+.
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g-~~~~~~~eii~~v~~~~-~~pv~vk~~~~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFG-TDPEVAAALVKACKAVS-KVPLYVKLSPNVTDIVPIAKAVE 186 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGG-GCHHHHHHHHHHHHHHC-SSCEEEEECSCSSCSHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhc-CCHHHHHHHHHHHHHhc-CCCEEEEECCChHHHHHHHHHHH
Confidence 45666666666666 67775544 23344 37888999999999998 78998876533322233356778
Q ss_pred HhcCCEEEecc
Q psy15244 887 KAGADIVDVAA 897 (1427)
Q Consensus 887 ~AGad~VD~av 897 (1427)
++|+|.|+++-
T Consensus 187 ~~G~d~i~v~~ 197 (311)
T 1ep3_A 187 AAGADGLTMIN 197 (311)
T ss_dssp HTTCSEEEECC
T ss_pred HcCCCEEEEeC
Confidence 89999999854
No 368
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=79.61 E-value=7.5 Score=44.65 Aligned_cols=225 Identities=14% Similarity=0.055 Sum_probs=0.0
Q ss_pred HHHHHhhcCCccEEeccCCCchhhhhhccccCh------HHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHH
Q psy15244 687 SPFVANRFNNLYSLEMWGGAVSHTCLKFLKECP------WERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCR 760 (1427)
Q Consensus 687 a~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p------~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~ 760 (1427)
|..+++ +|++.|=++|.+.--+.+.+-+-.+ ....+.+....++.++..=+ -.||. -|.| +...++
T Consensus 52 A~i~e~--aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~----d~Gyg-~~~~-v~~tv~ 123 (318)
T 1zlp_A 52 AAVVEK--TGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDG----DTGGG-GPLN-VQRFIR 123 (318)
T ss_dssp HHHHHH--TTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEEC----TTCSS-SHHH-HHHHHH
T ss_pred HHHHHH--cCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeC----CCCCC-CHHH-HHHHHH
Q ss_pred HHHhcCCCEEEEecc-------------CChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHH
Q psy15244 761 LASQAGIDIFRVFDP-------------LNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAK 827 (1427)
Q Consensus 761 ~a~~~Gid~~rif~~-------------~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~ 827 (1427)
+..+.|+.-+.|=|. +-+.+.+..-|++++++.. .....|.-- ........++..++-++
T Consensus 124 ~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~---~~~~~I~AR----tda~a~~gl~~ai~Ra~ 196 (318)
T 1zlp_A 124 ELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIG---DSDFFLVAR----TDARAPHGLEEGIRRAN 196 (318)
T ss_dssp HHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHT---TSCCEEEEE----ECTHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcc---cCCcEEEEe----eHHhhhcCHHHHHHHHH
Q ss_pred HHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCC
Q psy15244 828 QLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQP 907 (1427)
Q Consensus 828 ~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~ 907 (1427)
.+.++|||.|.+- |+-.++.+.++.+++. +|+-+-+-.-.....-+.-.--+.|+.+|-.....+ ++.+.
T Consensus 197 Ay~eAGAd~i~~e---~~~~~e~~~~i~~~l~-----~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~--raa~~ 266 (318)
T 1zlp_A 197 LYKEAGADATFVE---APANVDELKEVSAKTK-----GLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAV--YATAR 266 (318)
T ss_dssp HHHHTTCSEEEEC---CCCSHHHHHHHHHHSC-----SEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHH--HHHHH
T ss_pred HHHHcCCCEEEEc---CCCCHHHHHHHHHhcC-----CCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHH--HHHHH
Q ss_pred cHHHHHHHHHhCCCCCC-----CChhhHHHHHHH
Q psy15244 908 AMGTIVSCLENTDKRCG-----IDLHDVCDYSSY 936 (1427)
Q Consensus 908 ~lE~vv~~L~~~g~~tg-----idl~~L~~l~~~ 936 (1427)
++++++..|+..|.... .....|.++..+
T Consensus 267 a~~~~~~~l~~~g~~~~~~~~~~~~~el~~l~~~ 300 (318)
T 1zlp_A 267 ALVNIMKILKEKGTTRDDLDQMATFSEFNELISL 300 (318)
T ss_dssp HHHHHHHHHHHHSCSTTCGGGSCCHHHHHHHHTH
T ss_pred HHHHHHHHHHHcCCcccccccCCCHHHHHHhcCH
No 369
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=79.56 E-value=57 Score=37.80 Aligned_cols=82 Identities=21% Similarity=0.283 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEEc-------------------cccCcC---CHHHHHHHHHHHHHHcC-CceEEEeecCC-
Q psy15244 819 LNYYEDLAKQLVESGAQVLCLK-------------------DMAGLL---KPTAAKLLIGSFREKYP-NILIHVHTHDM- 874 (1427)
Q Consensus 819 ~~~~~~~a~~l~~~Gad~i~i~-------------------Dt~G~l---~P~~~~~lv~~lr~~~p-~ipi~~H~Hnd- 874 (1427)
.+.|.+.|+.+.++|.|.|-|- |-.|.. .+.-+.++|+++|+.++ +.||.+-.+-+
T Consensus 151 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~ 230 (349)
T 3hgj_A 151 LQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATD 230 (349)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccc
Confidence 4566777788888999987774 333322 23446889999999985 77887755532
Q ss_pred ---cch----HHHHHHHHHHhcCCEEEeccccC
Q psy15244 875 ---AGT----GVATTLACVKAGADIVDVAADSM 900 (1427)
Q Consensus 875 ---~Gl----A~An~laAi~AGad~VD~av~Gm 900 (1427)
.|. ++.-+-...++|+|+|+++..++
T Consensus 231 ~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~ 263 (349)
T 3hgj_A 231 WGEGGWSLEDTLAFARRLKELGVDLLDCSSGGV 263 (349)
T ss_dssp CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCc
Confidence 133 22233344578999999987544
No 370
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=79.53 E-value=11 Score=41.92 Aligned_cols=117 Identities=13% Similarity=0.093 Sum_probs=72.3
Q ss_pred HHHHHHHHHhcCCCEEEEeccC---ChHHHHHHHHHHHHHhcCCCcEEEEEEEee--ccCCCCCCC--CCCHHHHHHHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPL---NSVPNLVKGMDAVQQVTGGSTIVEATICYA--GDLTNPNKK--KYSLNYYEDLAK 827 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~---nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t--~d~~~p~~~--~~~~~~~~~~a~ 827 (1427)
..+.++.+++.|++.|-++..- -+-..++...+.+++.|+ .+....... .++.+|+.. ....+++.+.++
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl---~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~ 95 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGI---TLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLK 95 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTC---EEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCC---eEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence 6778999999999999998431 134556677778888998 554422211 134444321 134578888899
Q ss_pred HHHHCCCCEEEE--ccccC-----cCC-HHHHHHHHHHHHHHc-----CCceEEEeecCC
Q psy15244 828 QLVESGAQVLCL--KDMAG-----LLK-PTAAKLLIGSFREKY-----PNILIHVHTHDM 874 (1427)
Q Consensus 828 ~l~~~Gad~i~i--~Dt~G-----~l~-P~~~~~lv~~lr~~~-----p~ipi~~H~Hnd 874 (1427)
.+.++|+..+.+ -...| -.. ......++..|++.. -++.|.+|.|+.
T Consensus 96 ~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 155 (294)
T 3vni_A 96 RLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNR 155 (294)
T ss_dssp HHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCT
T ss_pred HHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 999999999874 22221 112 233344444444322 178899999975
No 371
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=79.49 E-value=13 Score=42.21 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=80.7
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHcC--CceEEEee-cCCcchHHHHHHHHHHh
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKYP--NILIHVHT-HDMAGTGVATTLACVKA 888 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~p--~ipi~~H~-Hnd~GlA~An~laAi~A 888 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+| .++.++-.++++...+... .+||-.|+ +|+.--++..+..|.++
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~ 102 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEH 102 (301)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 368999999999999999999999999999 4788888899999888764 48988876 57888899999999999
Q ss_pred cCCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 889 GADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 889 Gad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
|||.+=+..--.- .|+-+.++..++
T Consensus 103 Gadavlv~~P~y~----~~s~~~l~~~f~ 127 (301)
T 3m5v_A 103 GADGILSVAPYYN----KPTQQGLYEHYK 127 (301)
T ss_dssp TCSEEEEECCCSS----CCCHHHHHHHHH
T ss_pred CCCEEEEcCCCCC----CCCHHHHHHHHH
Confidence 9999876644332 245566766665
No 372
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=79.48 E-value=6 Score=44.50 Aligned_cols=74 Identities=14% Similarity=0.157 Sum_probs=58.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEcccc-CcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHh--cCCEE
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKDMA-GLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKA--GADIV 893 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~Dt~-G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~A--Gad~V 893 (1427)
.+.+..++.++++++.|||+|-|.=-. .--.+.++..+|+++++.+ ++||.+-+=+ ...+.+|+++ |+++|
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~-~~pisIDT~~-----~~v~~aal~a~~Ga~iI 104 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV-DLPCCLDSTN-----PDAIEAGLKVHRGHAMI 104 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC-CCCEEEECSC-----HHHHHHHHHHCCSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC-CCeEEEeCCC-----HHHHHHHHHhCCCCCEE
Confidence 367899999999999999999886422 2224778889999999987 8999986653 4566788999 99999
Q ss_pred Eec
Q psy15244 894 DVA 896 (1427)
Q Consensus 894 D~a 896 (1427)
+-.
T Consensus 105 Ndv 107 (271)
T 2yci_X 105 NST 107 (271)
T ss_dssp EEE
T ss_pred EEC
Confidence 743
No 373
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=79.47 E-value=15 Score=43.04 Aligned_cols=141 Identities=16% Similarity=0.212 Sum_probs=88.4
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccC
Q psy15244 765 AGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAG 844 (1427)
Q Consensus 765 ~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G 844 (1427)
+-+.-|+.-.+.+++.++-. .+..+..|. .+ + ..| -++++ ...|.+-+.++++.+.+.|+|-|.++=|+|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~Gi---~~--a-lvT--PF~~d-g~ID~~al~~lv~~li~~Gv~Gl~v~GTTG 104 (360)
T 4dpp_A 35 AVVPNFHLPMRSLEVKNRTN-TDDIKALRV---IT--A-IKT--PYLPD-GRFDLEAYDDLVNIQIQNGAEGVIVGGTTG 104 (360)
T ss_dssp -------------------C-HHHHHTCCE---EE--E-CCC--CBCTT-SSBCHHHHHHHHHHHHHTTCCEEEESSTTT
T ss_pred hhccccccccCCHhHhhccC-hhhcccCCe---EE--E-EeC--cCCCC-CCcCHHHHHHHHHHHHHcCCCEEEeccccc
Confidence 33444555555555555532 233344444 22 1 122 12222 369999999999999999999999999999
Q ss_pred ---cCCHHHHHHHHHHHHHHcC-CceEEEee-cCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhC
Q psy15244 845 ---LLKPTAAKLLIGSFREKYP-NILIHVHT-HDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENT 919 (1427)
Q Consensus 845 ---~l~P~~~~~lv~~lr~~~p-~ipi~~H~-Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~ 919 (1427)
.|+.++=.++++...+... .+||-.|+ +|+.--++..+..|.++|||.+=+.. +.= ..|+-+.++..++..
T Consensus 105 E~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~-PyY---~k~sq~gl~~hf~~I 180 (360)
T 4dpp_A 105 EGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN-PYY---GKTSIEGLIAHFQSV 180 (360)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC-CCS---SCCCHHHHHHHHHTT
T ss_pred ChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC-CCC---CCCCHHHHHHHHHHH
Confidence 6788888889988888763 58988766 57888888888999999999986553 332 335667888877643
No 374
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=79.36 E-value=14 Score=41.85 Aligned_cols=98 Identities=14% Similarity=0.210 Sum_probs=80.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccccCc---CCHHHHHHHHHHHHHHc-CCceEEEee-cCCcchHHHHHHHHHHhcC
Q psy15244 816 KYSLNYYEDLAKQLVESGAQVLCLKDMAGL---LKPTAAKLLIGSFREKY-PNILIHVHT-HDMAGTGVATTLACVKAGA 890 (1427)
Q Consensus 816 ~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~---l~P~~~~~lv~~lr~~~-p~ipi~~H~-Hnd~GlA~An~laAi~AGa 890 (1427)
..|.+-+.++++.+.+.|+|-|.++=|+|= |+.++-.++++...+.. ..+||-.|+ +|+.--++..+..|.++||
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999984 67788888898888875 468988887 7888999999999999999
Q ss_pred CEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 891 DIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 891 d~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
|.+=+..--+. .|+-+.++..++
T Consensus 99 davlv~~P~y~----~~~~~~l~~~f~ 121 (292)
T 3daq_A 99 DAIMLITPYYN----KTNQRGLVKHFE 121 (292)
T ss_dssp SEEEEECCCSS----CCCHHHHHHHHH
T ss_pred CEEEECCCCCC----CCCHHHHHHHHH
Confidence 99866543332 245566666655
No 375
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=79.35 E-value=3.7 Score=45.35 Aligned_cols=96 Identities=15% Similarity=0.200 Sum_probs=72.1
Q ss_pred hHHHHHHHHHhcCCCEEEEeccCChH--HHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCC-CCCCCCHHHHHHHHHHHH
Q psy15244 754 EVGAFCRLASQAGIDIFRVFDPLNSV--PNLVKGMDAVQQVTGGSTIVEATICYAGDLTNP-NKKKYSLNYYEDLAKQLV 830 (1427)
Q Consensus 754 vv~~~v~~a~~~Gid~~rif~~~nd~--~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p-~~~~~~~~~~~~~a~~l~ 830 (1427)
..+++++.+.+.|.+.+-|.+..-++ +.....|+.+++.|. .|-.-+-. -+| .....+++.+++.++.-.
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~---~v~~EvG~----k~~~~~~~~~~~~~I~~~~~~L 158 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGF---MVLTEVGK----KMPDKDKQLTIDDRIKLINFDL 158 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTC---EEEEEECC----SSHHHHTTCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCC---EEeeeccc----cCCcccCCCCHHHHHHHHHHHH
Confidence 58889999999999999999988765 466778999999999 55332211 122 123689999999999999
Q ss_pred HCCCCEE-----------EEccccCcCCHHHHHHHHH
Q psy15244 831 ESGAQVL-----------CLKDMAGLLKPTAAKLLIG 856 (1427)
Q Consensus 831 ~~Gad~i-----------~i~Dt~G~l~P~~~~~lv~ 856 (1427)
++||+.| .|+|..|-.....+..+++
T Consensus 159 eAGA~~ViiEarEsG~~iGi~~~~g~~r~d~v~~i~~ 195 (251)
T 1qwg_A 159 DAGADYVIIEGRESGKGKGLFDKEGKVKENELDVLAK 195 (251)
T ss_dssp HHTCSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHHT
T ss_pred HCCCcEEEEeeecccCCcccCCCCCCCcHHHHHHHHH
Confidence 9999976 4556667777666655544
No 376
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=79.33 E-value=6.5 Score=42.23 Aligned_cols=178 Identities=13% Similarity=0.071 Sum_probs=0.0
Q ss_pred cCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHH
Q psy15244 678 VRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
....+..+.++.+.+ .|.+.+++- .+|......-..-.+.++.+++.. +.++...+--.+.--|
T Consensus 13 ~D~~~~~~~~~~~~~--~G~~~i~~~---~~dg~~~~~~~~g~~~i~~i~~~~-~~~~~v~l~v~d~~~~---------- 76 (220)
T 2fli_A 13 ADYANFASELARIEE--TDAEYVHID---IMDGQFVPNISFGADVVASMRKHS-KLVFDCHLMVVDPERY---------- 76 (220)
T ss_dssp SCGGGHHHHHHHHHH--TTCCEEEEE---EEBSSSSSCBCBCHHHHHHHHTTC-CSEEEEEEESSSGGGG----------
T ss_pred CCHHHHHHHHHHHHH--cCCCEEEEE---eecCCCCCccccCHHHHHHHHHhC-CCCEEEEEeecCHHHH----------
Q ss_pred HHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q psy15244 758 FCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVL 837 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i 837 (1427)
++.+.++|+|.+.+-.... +.+...++.+++.|. .+-.++... .+.+.+..+ ..++|.|
T Consensus 77 -i~~~~~~gad~v~vh~~~~--~~~~~~~~~~~~~g~---~i~~~~~~~----------t~~e~~~~~-----~~~~d~v 135 (220)
T 2fli_A 77 -VEAFAQAGADIMTIHTEST--RHIHGALQKIKAAGM---KAGVVINPG----------TPATALEPL-----LDLVDQV 135 (220)
T ss_dssp -HHHHHHHTCSEEEEEGGGC--SCHHHHHHHHHHTTS---EEEEEECTT----------SCGGGGGGG-----TTTCSEE
T ss_pred -HHHHHHcCCCEEEEccCcc--ccHHHHHHHHHHcCC---cEEEEEcCC----------CCHHHHHHH-----HhhCCEE
Q ss_pred ----EEccccCcCCHHHHHHHHHHHHHHcC----CceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 838 ----CLKDMAGLLKPTAAKLLIGSFREKYP----NILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 838 ----~i~Dt~G~l~P~~~~~lv~~lr~~~p----~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
.-.-..|...+....+.++.+|+..+ ++||.+ +-|....|.-.++++|++.|.+.
T Consensus 136 l~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v----~GGI~~~~~~~~~~~Gad~vvvG 198 (220)
T 2fli_A 136 LIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEV----DGGVDNKTIRACYEAGANVFVAG 198 (220)
T ss_dssp EEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred EEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEE----ECcCCHHHHHHHHHcCCCEEEEC
No 377
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=79.30 E-value=5 Score=49.15 Aligned_cols=69 Identities=28% Similarity=0.343 Sum_probs=51.8
Q ss_pred HHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEecc
Q psy15244 823 EDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 823 ~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av 897 (1427)
.+.++.+.++|+|.|.|-=+.| .+....++|+.+|+.+|++||..-. ......+.+++++|||.|.+..
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g--~~~~~~~~i~~ir~~~p~~~Vi~g~----v~t~e~a~~l~~aGaD~I~Vg~ 301 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHG--HSEGVLQRIRETRAAYPHLEIIGGN----VATAEGARALIEAGVSAVKVGI 301 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTTCCEEEEE----ECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhccCceEEeccccc--cchHHHHHHHHHHHHCCCceEEEcc----cCcHHHHHHHHHhCCCEEEECC
Confidence 5678888999999988743333 4467889999999999999987622 1223556888999999998654
No 378
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=79.06 E-value=3.9 Score=44.80 Aligned_cols=158 Identities=14% Similarity=0.179 Sum_probs=93.3
Q ss_pred HHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHH---HHHHhcCCCc
Q psy15244 721 ERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMD---AVQQVTGGST 797 (1427)
Q Consensus 721 erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~---~a~~~G~~~~ 797 (1427)
+-++.+|+..|+.++..-+--. -|+..+..|.+ .|.+-+-.-..+ +.+...++ .+++.|.
T Consensus 53 ~~v~~lr~~~p~~~~dvhLmv~-------dp~~~i~~~~~------Ad~itvH~ea~~-~~~~~~i~~~~~i~~~G~--- 115 (227)
T 1tqx_A 53 PVINNLKKYTKSIFFDVHLMVE-------YPEKYVPLLKT------SNQLTFHFEALN-EDTERCIQLAKEIRDNNL--- 115 (227)
T ss_dssp HHHHHHGGGCSSCEEEEEEESS-------CGGGGGGGCTT------SSEEEEEGGGGT-TCHHHHHHHHHHHHTTTC---
T ss_pred HHHHHHHHhCCCCcEEEEEEEc-------CHHHHHHHHHh------CCEEEEeecCCc-cCHHHHHHHHHHHHHcCC---
Confidence 5678888888888776665432 24444443433 555543333221 12445666 8899998
Q ss_pred EEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCC-CCEEEEc----cccCcCCHHHHHHHHHHHHHHcCCceEEEeec
Q psy15244 798 IVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESG-AQVLCLK----DMAGLLKPTAAKLLIGSFREKYPNILIHVHTH 872 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~G-ad~i~i~----Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~H 872 (1427)
.+..++ +|. ++. +.++.+.++| +|.|.+- -..|-..+....+.|+.+|+..++++|.+
T Consensus 116 k~gval-------np~---tp~----~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~V--- 178 (227)
T 1tqx_A 116 WCGISI-------KPK---TDV----QKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQV--- 178 (227)
T ss_dssp EEEEEE-------CTT---SCG----GGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEE---
T ss_pred eEEEEe-------CCC---CcH----HHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhccCCeEEE---
Confidence 666554 331 222 3345566666 8887431 12243334466777888998876666665
Q ss_pred CCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 873 DMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 873 nd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
|-|....|.-.+++||||++=+.-. -.+.++.++.+..|+
T Consensus 179 -dGGI~~~ti~~~~~aGAd~~V~Gsa----If~~~d~~~~i~~l~ 218 (227)
T 1tqx_A 179 -DGGLNIETTEISASHGANIIVAGTS----IFNAEDPKYVIDTMR 218 (227)
T ss_dssp -ESSCCHHHHHHHHHHTCCEEEESHH----HHTCSSHHHHHHHHH
T ss_pred -ECCCCHHHHHHHHHcCCCEEEEeHH----HhCCCCHHHHHHHHH
Confidence 5688888999999999998743321 123344455554443
No 379
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=78.93 E-value=2.4 Score=46.46 Aligned_cols=73 Identities=16% Similarity=0.164 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEecc
Q psy15244 821 YYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 821 ~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av 897 (1427)
...++++.+.+.|++.|.+-|+.|...+....++++.+++.+ ++|+.+|.--.. ...+..++++|||.|....
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~~-~ipv~v~ggi~~---~~~~~~~l~~Gad~V~lg~ 104 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKL-DVQVELSGGIRD---DESLAAALATGCARVNVGT 104 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCHHHHHHHHHHC-SSEEEEESSCCS---HHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChHHHHHHHHHhc-CCcEEEECCCCC---HHHHHHHHHcCCCEEEECc
Confidence 356788999999999999998766543322118899999987 899988855443 2346777889999986644
No 380
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=78.85 E-value=21 Score=40.06 Aligned_cols=120 Identities=21% Similarity=0.203 Sum_probs=78.8
Q ss_pred HHHHHHhcCCCEEEEeccCC------------hHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCC-CCHHHHHH
Q psy15244 758 FCRLASQAGIDIFRVFDPLN------------SVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKK-YSLNYYED 824 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~n------------d~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~-~~~~~~~~ 824 (1427)
+.+.+.++|+|.+-+-+|+. .++.|...++.+...-. ...+. .| -|+.+- .+++..++
T Consensus 29 sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~-~~~vv------aD--~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 29 FAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAK-NAMIV------SD--LPFGAYQQSKEQAFA 99 (275)
T ss_dssp HHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCS-SSEEE------EE--CCTTSSSSCHHHHHH
T ss_pred HHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCC-CCeEE------EE--CCCCCccCCHHHHHH
Confidence 35666689999998777665 25666666666555432 01121 23 343332 37899999
Q ss_pred HHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeec------CCcc------------hHHHHHHHHH
Q psy15244 825 LAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTH------DMAG------------TGVATTLACV 886 (1427)
Q Consensus 825 ~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~H------nd~G------------lA~An~laAi 886 (1427)
-+.++.++||+.|.|-|. .++.+.|+++.++ ++|+--|.= |.+| -++.-+.+-.
T Consensus 100 na~rl~kaGa~aVklEdg------~e~~~~I~al~~a--gIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~ 171 (275)
T 1o66_A 100 AAAELMAAGAHMVKLEGG------VWMAETTEFLQMR--GIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHD 171 (275)
T ss_dssp HHHHHHHTTCSEEEEECS------GGGHHHHHHHHHT--TCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCc------HHHHHHHHHHHHc--CCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHH
Confidence 999999999999999996 2567788888876 577765543 2111 2444666777
Q ss_pred HhcCCEEE
Q psy15244 887 KAGADIVD 894 (1427)
Q Consensus 887 ~AGad~VD 894 (1427)
+|||+.|=
T Consensus 172 eAGA~~iv 179 (275)
T 1o66_A 172 DAGAAVVL 179 (275)
T ss_dssp HTTCSEEE
T ss_pred HcCCcEEE
Confidence 89999763
No 381
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=78.85 E-value=24 Score=40.09 Aligned_cols=199 Identities=15% Similarity=0.148 Sum_probs=113.6
Q ss_pred eecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHH----HHHHhCCCCceee
Q psy15244 662 TDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLA----ELRELIPNIPFQM 737 (1427)
Q Consensus 662 ~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~----~lr~~~p~~~~qm 737 (1427)
|--.|=||.+ ..+.++.++.|+.+.+ .|.+.|.++|-+|--.+-.--.+..++|+. .+++.. ++++..
T Consensus 49 TPDSFsdgg~-----~~~~~~a~~~a~~~v~--~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSI 120 (297)
T 1tx2_A 49 TPDSFSDGGS-----YNEVDAAVRHAKEMRD--EGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISI 120 (297)
T ss_dssp CCCTTCSSCB-----HHHHHHHHHHHHHHHH--TTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEE
T ss_pred CCCccccCCc-----cCCHHHHHHHHHHHHH--cCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEE
Confidence 3334678765 3567888888888877 799999999755411111111233455543 333332 555543
Q ss_pred eecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCC
Q psy15244 738 ILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKY 817 (1427)
Q Consensus 738 l~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~ 817 (1427)
=. +- -+.+++|+++|.+++.=....+.. ...++.+++.|. -+ .++... +.|. |
T Consensus 121 DT----------~~----~~V~~aAl~aGa~iINdvsg~~~d---~~m~~~aa~~g~---~v--Vlmh~~--G~p~---y 173 (297)
T 1tx2_A 121 DT----------YK----AEVAKQAIEAGAHIINDIWGAKAE---PKIAEVAAHYDV---PI--ILMHNR--DNMN---Y 173 (297)
T ss_dssp EC----------SC----HHHHHHHHHHTCCEEEETTTTSSC---THHHHHHHHHTC---CE--EEECCC--SCCC---C
T ss_pred eC----------CC----HHHHHHHHHcCCCEEEECCCCCCC---HHHHHHHHHhCC---cE--EEEeCC--CCCC---c
Confidence 22 22 234677788899998655554422 244556677776 22 112111 2342 3
Q ss_pred C------HHHHHHHHHHHHHCCCC--EEEEccc-cCc-CCHHHHHHHHHHHHHHc-CCceEEEeec--------------
Q psy15244 818 S------LNYYEDLAKQLVESGAQ--VLCLKDM-AGL-LKPTAAKLLIGSFREKY-PNILIHVHTH-------------- 872 (1427)
Q Consensus 818 ~------~~~~~~~a~~l~~~Gad--~i~i~Dt-~G~-l~P~~~~~lv~~lr~~~-p~ipi~~H~H-------------- 872 (1427)
+ .+++.+.++.+.++|+. .|.| |. .|. -+..+-.++++.+++-- .+.|+-+=..
T Consensus 174 ~d~v~ev~~~l~~~i~~a~~~GI~~~~Iil-DPg~Gfgk~~~~n~~ll~~l~~l~~lg~Pvl~G~Srksfig~~~g~~~~ 252 (297)
T 1tx2_A 174 RNLMADMIADLYDSIKIAKDAGVRDENIIL-DPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVE 252 (297)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEEECTTCHHHHHHHTCCGG
T ss_pred chHHHHHHHHHHHHHHHHHHcCCChhcEEE-eCCCCcCCCHHHHHHHHHHHHHHHhCCCCEEEEeccchhhhhhcCCCHH
Confidence 1 47888889999999987 4444 54 222 23455667777665321 2677655444
Q ss_pred CCcchHHHHHHHHHHhcCCEEEec
Q psy15244 873 DMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 873 nd~GlA~An~laAi~AGad~VD~a 896 (1427)
+-.+-.++.+..|+..||++|.+.
T Consensus 253 ~r~~~t~a~~~~a~~~ga~Ivrvh 276 (297)
T 1tx2_A 253 ERLEGTGATVCLGIEKGCEFVRVH 276 (297)
T ss_dssp GCHHHHHHHHHHHHHTTCSEEEES
T ss_pred HhHHHHHHHHHHHHHCCCcEEEeC
Confidence 222334456677888999999873
No 382
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=78.83 E-value=23 Score=41.58 Aligned_cols=164 Identities=13% Similarity=0.125 Sum_probs=94.9
Q ss_pred CHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHH
Q psy15244 679 RTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAF 758 (1427)
Q Consensus 679 ~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~ 758 (1427)
+.+++.+-|..+.+ .|++.+++-.|.. -+...++++.+|+.+++.++.+ -+ | -||+ +++ ..++
T Consensus 147 ~~e~~~~~a~~~~~--~Gf~~iKik~g~~--------~~~~~e~v~avr~a~gd~~l~v--D~-n-~~~~--~~~-a~~~ 209 (384)
T 2pgw_A 147 TAEELARDAAVGHA--QGERVFYLKVGRG--------EKLDLEITAAVRGEIGDARLRL--DA-N-EGWS--VHD-AINM 209 (384)
T ss_dssp SHHHHHHHHHHHHH--TTCCEEEEECCSC--------HHHHHHHHHHHHTTSTTCEEEE--EC-T-TCCC--HHH-HHHH
T ss_pred CHHHHHHHHHHHHH--cCCCEEEECcCCC--------HHHHHHHHHHHHHHcCCcEEEE--ec-C-CCCC--HHH-HHHH
Confidence 44667777776666 6999999854421 1234688999999988555433 22 1 2342 233 4457
Q ss_pred HHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCC-CCEE
Q psy15244 759 CRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESG-AQVL 837 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~G-ad~i 837 (1427)
++...+.|++.+.=-.+-.+++.+...-+ ..+. -|+-.+ +-++.+.+ +++.+.| +|.|
T Consensus 210 ~~~l~~~~i~~iEqP~~~~~~~~~~~l~~---~~~i-------PI~~de-------~i~~~~~~----~~~i~~~~~d~v 268 (384)
T 2pgw_A 210 CRKLEKYDIEFIEQPTVSWSIPAMAHVRE---KVGI-------PIVADQ-------AAFTLYDV----YEICRQRAADMI 268 (384)
T ss_dssp HHHHGGGCCSEEECCSCTTCHHHHHHHHH---HCSS-------CEEEST-------TCCSHHHH----HHHHHTTCCSEE
T ss_pred HHHHHhcCCCEEeCCCChhhHHHHHHHHh---hCCC-------CEEEeC-------CcCCHHHH----HHHHHcCCCCEE
Confidence 77777889998764333345655544322 2333 223222 23455443 3444444 7888
Q ss_pred EEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHH
Q psy15244 838 CLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTL 883 (1427)
Q Consensus 838 ~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~l 883 (1427)
.++= .=+.-+..+.++....+ .. ++++.+|+-...+.+++.++
T Consensus 269 ~ik~-~~~GGit~~~~i~~~A~-~~-g~~~~~~~~~es~i~~aa~~ 311 (384)
T 2pgw_A 269 CIGP-REIGGIQPMMKAAAVAE-AA-GLKICIHSSFTTGITTCAEH 311 (384)
T ss_dssp EECH-HHHTSHHHHHHHHHHHH-HT-TCCEEECCCSCCHHHHHHHH
T ss_pred EEcc-hhhCCHHHHHHHHHHHH-HC-CCeEeeccCcCCHHHHHHHH
Confidence 8753 22334556666655554 44 79999998666777665443
No 383
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=78.58 E-value=11 Score=41.80 Aligned_cols=205 Identities=14% Similarity=0.165 Sum_probs=103.5
Q ss_pred HHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCc------chHHH
Q psy15244 684 KKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSP------AEVGA 757 (1427)
Q Consensus 684 l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~------nvv~~ 757 (1427)
...++.+.+ .|++.||+|++. ...+ ...+ .+.++.+++.+....+....=+. ..+. +.++ +..+.
T Consensus 18 ~~~l~~~~~--~G~~~vEl~~~~--~~~~--~~~~-~~~~~~~~~~l~~~gl~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 88 (286)
T 3dx5_A 18 TDIVQFAYE--NGFEGIELWGTH--AQNL--YMQE-YETTERELNCLKDKTLEITMISD-YLDI-SLSADFEKTIEKCEQ 88 (286)
T ss_dssp HHHHHHHHH--TTCCEEEEEHHH--HHHH--HHHC-HHHHHHHHHHTGGGTCCEEEEEC-CCCC-STTSCHHHHHHHHHH
T ss_pred HHHHHHHHH--hCCCEEEEcccc--cccc--cccC-HHHHHHHHHHHHHcCCeEEEEec-CCCC-CCchhHHHHHHHHHH
Confidence 344555566 699999998531 1011 0011 24456666666544433221111 0110 1121 23456
Q ss_pred HHHHHHhcCCCEEEEeccCCh------------HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHH
Q psy15244 758 FCRLASQAGIDIFRVFDPLNS------------VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDL 825 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd------------~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~ 825 (1427)
.++.|.+.|++.++++..... ++.+....+.+++.|. .+ ++-- .|.....+.+.+.++
T Consensus 89 ~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv---~l----~lE~---~~~~~~~~~~~~~~l 158 (286)
T 3dx5_A 89 LAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNM---YV----LLET---HPNTLTDTLPSTLEL 158 (286)
T ss_dssp HHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTC---EE----EEEC---CTTSTTSSHHHHHHH
T ss_pred HHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCC---EE----EEec---CCCcCcCCHHHHHHH
Confidence 788889999999998754321 3567777888888887 32 2221 122223567777777
Q ss_pred HHHHHHCCCCEE-EEccccCcCCH-HHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHH---HHH-HhcCCEEEecccc
Q psy15244 826 AKQLVESGAQVL-CLKDMAGLLKP-TAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTL---ACV-KAGADIVDVAADS 899 (1427)
Q Consensus 826 a~~l~~~Gad~i-~i~Dt~G~l~P-~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~l---aAi-~AGad~VD~av~G 899 (1427)
++.+ +.+.+ ..-|+.=.... ....+.++.+. +--.++|.||..+-.....+ ... ..|... ....
T Consensus 159 ~~~~---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~----~~i~~vHl~D~~~~~~~~~~~~~~~~~~~g~~~---~~~~ 228 (286)
T 3dx5_A 159 LGEV---DHPNLKINLDFLHIWESGADPVDSFQQLR----PWIQHYHFKNISSADYLHVFEPNNVYAAAGNRT---GMVP 228 (286)
T ss_dssp HHHH---CCTTEEEEEEHHHHHHTTCCHHHHHHHHG----GGEEEEEECEESCGGGGGGGSHHHHHSTTCCCT---TEEC
T ss_pred HHhc---CCCCeEEEeccccHhhcCCCHHHHHHHHH----hHheEEEecCCcccccccccCccccccccCcce---eeec
Confidence 6655 32322 33355432211 11223333332 34569999998774210000 000 012111 0122
Q ss_pred CCCCCCCCcHHHHHHHHHhC
Q psy15244 900 MSGICSQPAMGTIVSCLENT 919 (1427)
Q Consensus 900 mG~~tgn~~lE~vv~~L~~~ 919 (1427)
+| .|..+...++.+|+..
T Consensus 229 ~G--~G~id~~~i~~~L~~~ 246 (286)
T 3dx5_A 229 LF--EGIVNYDEIIQEVRDT 246 (286)
T ss_dssp GG--GSSSCHHHHHHHHTTS
T ss_pred cC--CCcCCHHHHHHHHHhc
Confidence 33 5778899999999875
No 384
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=78.47 E-value=20 Score=40.07 Aligned_cols=200 Identities=14% Similarity=0.100 Sum_probs=106.6
Q ss_pred EEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhC--CCCceee
Q psy15244 660 LLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELI--PNIPFQM 737 (1427)
Q Consensus 660 ~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~--p~~~~qm 737 (1427)
.+|--.|=||.+. ++.++.++-|..+-+ .|.+.|++||-+|=-.+-.--.+..|+|+.-+-+.+ +++++..
T Consensus 14 NvTPDSFsDGG~~-----~~~~~a~~~a~~m~~--~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSI 86 (270)
T 4hb7_A 14 NVTPDSFSDGGKF-----NNVETAINRVKAMID--EGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISV 86 (270)
T ss_dssp ECC---------------CHHHHHHHHHHHHHH--TTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEE
T ss_pred eCCCCCCCCCCCC-----CCHHHHHHHHHHHHH--CCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEE
Confidence 3444447788652 456777787887776 699999999865532222222334577765444443 2333332
Q ss_pred eecccccccccCCCcchHHHHHHHHHhcCCCEEEEec-cCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCC
Q psy15244 738 ILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFD-PLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKK 816 (1427)
Q Consensus 738 l~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~-~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~ 816 (1427)
..|-. +..++|.++|+++++=.. ...|- ...+.+.+.+. - ..++... +.| +
T Consensus 87 ----------DT~~~----~Va~~al~aGa~iINDVs~g~~d~----~m~~~va~~~~---~--~vlMH~~--~~p---~ 138 (270)
T 4hb7_A 87 ----------DTFRS----EVAEACLKLGVDMINDQWAGLYDH----RMFQIVAKYDA---E--IILMHNG--NGN---R 138 (270)
T ss_dssp ----------ECSCH----HHHHHHHHHTCCEEEETTTTSSCT----HHHHHHHHTTC---E--EEEECCC--SSC---C
T ss_pred ----------ECCCH----HHHHHHHHhccceeccccccccch----hHHHHHHHcCC---C--eEEeccc--cCC---c
Confidence 22333 346688889999986332 22332 23445566666 2 2333332 344 3
Q ss_pred CC------HHHHHHHHHHHHHCCCC--EEEEccccCcCC-HHHHHHHHHHHHHHc-CCceEEEee-----------cC--
Q psy15244 817 YS------LNYYEDLAKQLVESGAQ--VLCLKDMAGLLK-PTAAKLLIGSFREKY-PNILIHVHT-----------HD-- 873 (1427)
Q Consensus 817 ~~------~~~~~~~a~~l~~~Gad--~i~i~Dt~G~l~-P~~~~~lv~~lr~~~-p~ipi~~H~-----------Hn-- 873 (1427)
|+ .+|+.+-++.+.++|+. .|.|==-.|..+ +++=.+|++.|.+-. -+.||-+=. .+
T Consensus 139 ~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~~~~~lg~PvLvG~SRKsfig~~lg~~~~ 218 (270)
T 4hb7_A 139 DEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTT 218 (270)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHTCHHHHHTTCSCBEECCTTSHHHHHHHCSCCC
T ss_pred cccchhHHHHHHHHHHHHHHHcCCCCceEEEeCCCCcccccccHHHHHhhHHHHhcCCCCEEEEecHHHHHHHHhCCCCC
Confidence 43 45677777888899985 555533445443 566677877776432 156654311 11
Q ss_pred ---CcchHHHHHHHHHHhcCCEEE
Q psy15244 874 ---MAGTGVATTLACVKAGADIVD 894 (1427)
Q Consensus 874 ---d~GlA~An~laAi~AGad~VD 894 (1427)
-..-.+|.+..|+..||++|=
T Consensus 219 ~~~R~~gt~a~~~~a~~~Ga~ivR 242 (270)
T 4hb7_A 219 PVERDEVTAATTAYGIMKGVRAVR 242 (270)
T ss_dssp SGGGHHHHHHHHHHHHHHTCCEEE
T ss_pred hHHhhHHHHHHHHHHHHCCCCEEE
Confidence 122234566678888999873
No 385
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=78.42 E-value=9.7 Score=44.26 Aligned_cols=120 Identities=14% Similarity=0.149 Sum_probs=81.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEc--------ccc-CcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHH
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLK--------DMA-GLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLAC 885 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~--------Dt~-G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laA 885 (1427)
.+.+.+.-+++++.|.++|++.|-+. |-. |... ....+.++.+++..|+++|.+.+.-..|. ....-.|
T Consensus 25 ~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~-~~~~e~l~~i~~~~~~~~i~~l~~p~~~~-~~~i~~a 102 (345)
T 1nvm_A 25 HQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGR-HTDLEYIEAVAGEISHAQIATLLLPGIGS-VHDLKNA 102 (345)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCS-SCHHHHHHHHHTTCSSSEEEEEECBTTBC-HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCC-CCHHHHHHHHHhhCCCCEEEEEecCCccc-HHHHHHH
Confidence 36899999999999999999999984 211 2211 23456788888887899988874222232 3466789
Q ss_pred HHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCC--------CCCChhhHHHHHHHHHHH
Q psy15244 886 VKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKR--------CGIDLHDVCDYSSYWRKV 940 (1427)
Q Consensus 886 i~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~--------tgidl~~L~~l~~~v~~~ 940 (1427)
+++|++.|...+ .+.+. ...++++..++..|.+ +..+.+.+.++++.+.+.
T Consensus 103 ~~aGvd~v~I~~-~~s~~---~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~ 161 (345)
T 1nvm_A 103 YQAGARVVRVAT-HCTEA---DVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESY 161 (345)
T ss_dssp HHHTCCEEEEEE-ETTCG---GGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHH
T ss_pred HhCCcCEEEEEE-eccHH---HHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHC
Confidence 999999987763 33221 2456677777766543 345677788888877765
No 386
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=78.41 E-value=4.5 Score=48.13 Aligned_cols=125 Identities=12% Similarity=0.020 Sum_probs=75.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCC---EEEEEecCCCccCcc-cccc------ceEEEcCCCCCcccCCCCHHHHHHHH
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGI---KSVGIYSEQDKFSAH-RTKV------DQAFLVGKGMPPVAAYLNIPEIICIA 126 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi---~~vav~s~~d~~s~~-~~~a------De~~~i~~~~~~~~~yldi~~Ii~ia 126 (1427)
|+||||+|.|.++..+++.+.+.|. .+++++.+.+..... ..+. -..+.+ +..+.+.+.+++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~--------D~~d~~~l~~~l 72 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTV--------DADSIEELVALI 72 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEEC--------CTTCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEe--------cCCCHHHHHHHH
Confidence 4699999999999999999999983 666555443321100 0010 011121 234567888888
Q ss_pred HhcCCCEEEeCCCcccccHHHHHHHHHCCCceeCC-CHHHH--HH--hCCHHHHHHHHHhCCCCCCCCc
Q psy15244 127 KNNNVDAIHPGYGFLSEREDFAKAVIGAGLEFIGP-APNVL--KT--LGDKVLARDAALKADVPIIPGT 190 (1427)
Q Consensus 127 ~~~~vDaI~pg~gflsE~~~~a~~~e~~Gi~fiGp-s~eai--~~--~~DK~~~r~~a~~aGVpvp~~~ 190 (1427)
++.++|.|+-..+.. ....++++|.+.|..++-- +.... .. ...-..+.+.++++|+....+.
T Consensus 73 ~~~~~DvVin~ag~~-~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~ 140 (405)
T 4ina_A 73 NEVKPQIVLNIALPY-QDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGS 140 (405)
T ss_dssp HHHCCSEEEECSCGG-GHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECC
T ss_pred HhhCCCEEEECCCcc-cChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcC
Confidence 887899999776643 2457788888899887611 11000 00 0001245666778888765554
No 387
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=78.40 E-value=6.1 Score=45.71 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=49.5
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHHHc-CCEEEEEecCCCccCccccccceEEEcCCCCCcccCCC-CHHHHHHHHHhcCCC
Q psy15244 56 TMEKILIAN-RSEVAIRVARACNEM-GIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYL-NIPEIICIAKNNNVD 132 (1427)
Q Consensus 56 ~~kkVLIag-rGeia~riiraa~el-Gi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yl-di~~Ii~ia~~~~vD 132 (1427)
++++|||.| .|.++..+++.+.+. |++++++...............-.+..+ +.. +.+.+.++.+ ++|
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~-------Dl~~d~~~~~~~~~--~~d 93 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEG-------DITINKEWVEYHVK--KCD 93 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEEC-------CTTTCHHHHHHHHH--HCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeC-------ccCCCHHHHHHHhc--cCC
Confidence 468999999 699999999999998 9999988765543221111111122211 234 6677777776 589
Q ss_pred EEEeCCC
Q psy15244 133 AIHPGYG 139 (1427)
Q Consensus 133 aI~pg~g 139 (1427)
.|+-.-+
T Consensus 94 ~Vih~A~ 100 (372)
T 3slg_A 94 VILPLVA 100 (372)
T ss_dssp EEEECBC
T ss_pred EEEEcCc
Confidence 8885433
No 388
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=78.38 E-value=0.42 Score=52.53 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=0.0
Q ss_pred CCceecCCCeEEEEEEecCCCE-EecCCEEEEEEc
Q psy15244 1357 AGEIGAPMPGNIIEVKVKVGQQ-VKKNDVLIVMSV 1390 (1427)
Q Consensus 1357 ~~~V~APm~G~v~~v~V~~Gd~-V~~G~~l~~iea 1390 (1427)
...|.||..|+|.+++|++||. |..|++|++|+.
T Consensus 46 ~~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~~ 80 (229)
T 1zy8_K 46 VVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVE 80 (229)
T ss_dssp -----------------------------------
T ss_pred eeEEecCCCeEEEEEEecCCCeeecCCCEEEEEec
Confidence 3578999999999999999997 999999999863
No 389
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=78.09 E-value=11 Score=42.53 Aligned_cols=114 Identities=16% Similarity=0.165 Sum_probs=70.1
Q ss_pred HHHHHHHHHhcCCCEEEEeccC----ChHHHHHHHHHHHHHhcCCCcEEEEEEEeec---cCCCCCCC----------CC
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPL----NSVPNLVKGMDAVQQVTGGSTIVEATICYAG---DLTNPNKK----------KY 817 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~----nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~---d~~~p~~~----------~~ 817 (1427)
..+.++.+++.|.+.|-++..- .+ ...+...+.+++.|+ .+.. ++... .+.+|+.. ..
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~-~~~~~~~~~l~~~GL---~v~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 105 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGG-VPMMDFKKMAEDAGL---KIIS-SHVNPVDTSISDPFKAMIFKYSKEVTPK 105 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETT-EEHHHHHHHHHHTTC---EEEE-EECCCBCTTCSSTTTTBCCSCCTTTHHH
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCC-CCHHHHHHHHHHcCC---eEEE-EecccccccccCcccccccccchhhHHH
Confidence 5678999999999999998521 11 123444456777898 5432 22221 11234320 12
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHc-----CCce--EEEeecC
Q psy15244 818 SLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKY-----PNIL--IHVHTHD 873 (1427)
Q Consensus 818 ~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~-----p~ip--i~~H~Hn 873 (1427)
..+++.+.++.+.++|+..|.+.-......+.....++..|++.. -++. |.+|.|+
T Consensus 106 ~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 106 IMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 367788888889999999998852211134555555555555432 1788 9999997
No 390
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=78.01 E-value=38 Score=37.26 Aligned_cols=148 Identities=14% Similarity=0.072 Sum_probs=89.1
Q ss_pred chHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHC
Q psy15244 753 AEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVES 832 (1427)
Q Consensus 753 nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~ 832 (1427)
+-+++.+++|.+.|+.-+-| ..+++....+. .+..+. .+.. .. +.|.. ..+.+--+.-++++.+.
T Consensus 43 ~~i~~lc~eA~~~~~~aVcV--~p~~v~~a~~~---L~~s~v---~v~t----Vi--gFP~G-~~~~~~Kv~Ea~~Ai~~ 107 (239)
T 3ngj_A 43 EQIRKLCSEAAEYKFASVCV--NPTWVPLCAEL---LKGTGV---KVCT----VI--GFPLG-ATPSEVKAYETKVAVEQ 107 (239)
T ss_dssp HHHHHHHHHHHHHTCSEEEE--CGGGHHHHHHH---HTTSSC---EEEE----EE--STTTC-CSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHH---hCCCCC---eEEE----Ee--ccCCC-CCchHHHHHHHHHHHHc
Confidence 33667799999999988766 33455544433 333333 3322 22 24432 45666667778889999
Q ss_pred CCCEEEEccccCcC---CHHHHHHHHHHHHHHcCC--ceEEEeecC-CcchHHHHHHHHHHhcCCEEEeccccCCCCCCC
Q psy15244 833 GAQVLCLKDMAGLL---KPTAAKLLIGSFREKYPN--ILIHVHTHD-MAGTGVATTLACVKAGADIVDVAADSMSGICSQ 906 (1427)
Q Consensus 833 Gad~i~i~Dt~G~l---~P~~~~~lv~~lr~~~p~--ipi~~H~Hn-d~GlA~An~laAi~AGad~VD~av~GmG~~tgn 906 (1427)
|||.|-+.=-.|.+ .-..+.+-+.++++..++ +++-+=+-- |.-.=...+..|.++|||+|.++. |+ .+|.
T Consensus 108 GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTST-Gf--~~gg 184 (239)
T 3ngj_A 108 GAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTST-GF--GTHG 184 (239)
T ss_dssp TCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC-SS--SSCC
T ss_pred CCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCC-CC--CCCC
Confidence 99988776555552 335678888888888754 333222111 111122233456899999999984 23 2466
Q ss_pred CcHHHHHHHHHh
Q psy15244 907 PAMGTIVSCLEN 918 (1427)
Q Consensus 907 ~~lE~vv~~L~~ 918 (1427)
+.+|++-.+.+.
T Consensus 185 At~~dv~lmr~~ 196 (239)
T 3ngj_A 185 ATPEDVKLMKDT 196 (239)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHh
Confidence 777776665543
No 391
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=77.95 E-value=22 Score=38.77 Aligned_cols=100 Identities=10% Similarity=-0.008 Sum_probs=70.9
Q ss_pred HHHHHHHHHhcCCCEEEEecc---C-ChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDP---L-NSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLV 830 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~---~-nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~ 830 (1427)
..+.++.+++.|++.|-++.. . .+-..++...+.+++.|+ .+...-.+. ..+.+++.+.++.+.
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl---~i~~~~~~~---------~~~~~~~~~~i~~A~ 99 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKV---TGYAVGPIY---------MKSEEEIDRAFDYAK 99 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTC---EEEEEEEEE---------ECSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCC---eEEEEeccc---------cCCHHHHHHHHHHHH
Confidence 567899999999999999864 1 134456677778888998 544322221 146889999999999
Q ss_pred HCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecC
Q psy15244 831 ESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHD 873 (1427)
Q Consensus 831 ~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hn 873 (1427)
++|+..|.+. .| .+...++....+ .. ++.|.+|.|+
T Consensus 100 ~lGa~~v~~~--p~---~~~l~~l~~~a~-~~-gv~l~lEn~~ 135 (257)
T 3lmz_A 100 RVGVKLIVGV--PN---YELLPYVDKKVK-EY-DFHYAIHLHG 135 (257)
T ss_dssp HHTCSEEEEE--EC---GGGHHHHHHHHH-HH-TCEEEEECCC
T ss_pred HhCCCEEEec--CC---HHHHHHHHHHHH-Hc-CCEEEEecCC
Confidence 9999988873 22 244555555554 44 7899999996
No 392
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=77.85 E-value=10 Score=42.01 Aligned_cols=117 Identities=12% Similarity=0.089 Sum_probs=70.2
Q ss_pred HHHHHHHHHhcCCCEEEEeccC--------ChHHHHHHHHHHHHHhcCCCcE---EEEEEEeeccCCCCCCC--CCCHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPL--------NSVPNLVKGMDAVQQVTGGSTI---VEATICYAGDLTNPNKK--KYSLNY 821 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~--------nd~~~~~~~i~~a~~~G~~~~~---v~~~i~~t~d~~~p~~~--~~~~~~ 821 (1427)
..+.++.+++.|++.|.++..- -+-..++...+.+++.|+ . +.....|..++.+|+.. ....++
T Consensus 14 ~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl---~~~~~~~h~~~~~~~~~~~~~~r~~~~~~ 90 (287)
T 2x7v_A 14 FDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGI---DWENAFCHSGYLINLASPKDDIWQKSVEL 90 (287)
T ss_dssp GGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTC---CGGGEEEECCTTCCTTCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCC---CcceeEEecccccccCCCCHHHHHHHHHH
Confidence 3456888999999999997521 122456666677888898 3 22222233334444311 124568
Q ss_pred HHHHHHHHHHCCCCEEEEcc--ccCcCCHHHHHHHHHHHHHHc---CCceEEEeecCC
Q psy15244 822 YEDLAKQLVESGAQVLCLKD--MAGLLKPTAAKLLIGSFREKY---PNILIHVHTHDM 874 (1427)
Q Consensus 822 ~~~~a~~l~~~Gad~i~i~D--t~G~l~P~~~~~lv~~lr~~~---p~ipi~~H~Hnd 874 (1427)
+.+.++.+.++|+..|.+.= ..+.........++..|++.. .++.|.+|.|+.
T Consensus 91 ~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~ 148 (287)
T 2x7v_A 91 LKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQ 148 (287)
T ss_dssp HHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCC
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCC
Confidence 88888888999999887731 111112233344555555432 378899999974
No 393
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=77.51 E-value=17 Score=39.46 Aligned_cols=126 Identities=20% Similarity=0.250 Sum_probs=76.5
Q ss_pred hHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHC
Q psy15244 754 EVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVES 832 (1427)
Q Consensus 754 vv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~ 832 (1427)
.+.+.++.+.+.|++.+++- ..+ .++.+++. +. -+. .+ ...|| |+..-+ .+-..+.++.+.++
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~----~~~----~i~~i~~~~~~---p~i-~~-~~~~~--~~~~~~-i~~~~~~i~~~~~~ 100 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN----SVR----DIKEIQAITDL---PII-GI-IKKDY--PPQEPF-ITATMTEVDQLAAL 100 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE----SHH----HHHHHHTTCCS---CEE-EE-CBCCC--TTSCCC-BSCSHHHHHHHHTT
T ss_pred hHHHHHHHHHHCCCcEeecC----CHH----HHHHHHHhCCC---CEE-ee-EcCCC--Cccccc-cCChHHHHHHHHHc
Confidence 45667888889999999873 222 24444443 22 111 11 11222 111111 00123456778899
Q ss_pred CCCEEEEccccCcCCH--HHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCC
Q psy15244 833 GAQVLCLKDMAGLLKP--TAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMS 901 (1427)
Q Consensus 833 Gad~i~i~Dt~G~l~P--~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG 901 (1427)
|+|.|.+- ..-...| ....++++.+++.+|+.++.+-+|+ ...+..|.++|+|+|..++.|+.
T Consensus 101 Gad~V~l~-~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t-----~~ea~~a~~~Gad~i~~~v~g~~ 165 (234)
T 1yxy_A 101 NIAVIAMD-CTKRDRHDGLDIASFIRQVKEKYPNQLLMADIST-----FDEGLVAHQAGIDFVGTTLSGYT 165 (234)
T ss_dssp TCSEEEEE-CCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSS-----HHHHHHHHHTTCSEEECTTTTSS
T ss_pred CCCEEEEc-ccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCC-----HHHHHHHHHcCCCEEeeeccccC
Confidence 99988663 2222234 2457889999999888888887775 34478899999999976666653
No 394
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=77.41 E-value=2.5 Score=46.42 Aligned_cols=71 Identities=20% Similarity=0.179 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHCCCCEEEEccccCcCC--HHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEecc
Q psy15244 821 YYEDLAKQLVESGAQVLCLKDMAGLLK--PTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 821 ~~~~~a~~l~~~Gad~i~i~Dt~G~l~--P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av 897 (1427)
...++++.+.++|++.|.+-|+-|... +.. ++++.+++.+ ++|+.+|.--.. ...+..++++|||.|....
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~-~ipv~v~ggI~~---~~~~~~~l~~Gad~V~lg~ 105 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAM-DIKVELSGGIRD---DDTLAAALATGCTRVNLGT 105 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHC-SSEEEEESSCCS---HHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhc-CCcEEEECCcCC---HHHHHHHHHcCCCEEEECc
Confidence 456788999999999999998766432 222 7899999987 899988865443 2346778889999987543
No 395
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=77.38 E-value=19 Score=40.75 Aligned_cols=122 Identities=22% Similarity=0.214 Sum_probs=75.4
Q ss_pred HHHHHHHh-cCCCEEEEeccC-----------ChHHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHH
Q psy15244 757 AFCRLASQ-AGIDIFRVFDPL-----------NSVPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYE 823 (1427)
Q Consensus 757 ~~v~~a~~-~Gid~~rif~~~-----------nd~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~ 823 (1427)
+.++.+.+ .|+|.+.|-.+. .+.+.+.+.++.+++. +. -+.+-+. |+. . .+.
T Consensus 115 ~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~---pv~vk~~-------~~~--~---~~~ 179 (311)
T 1ep3_A 115 AVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKV---PLYVKLS-------PNV--T---DIV 179 (311)
T ss_dssp HHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSS---CEEEEEC-------SCS--S---CSH
T ss_pred HHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCC---CEEEEEC-------CCh--H---HHH
Confidence 34445555 899988764321 1446667888888877 65 3322222 111 1 245
Q ss_pred HHHHHHHHCCCCEEEEcccc-------------------CcCCH---HHHHHHHHHHHHHcCCceEEEeecCCcch-HHH
Q psy15244 824 DLAKQLVESGAQVLCLKDMA-------------------GLLKP---TAAKLLIGSFREKYPNILIHVHTHDMAGT-GVA 880 (1427)
Q Consensus 824 ~~a~~l~~~Gad~i~i~Dt~-------------------G~l~P---~~~~~lv~~lr~~~p~ipi~~H~Hnd~Gl-A~A 880 (1427)
++++.+.++|+|.|.+.++. |+.-| ....++++.+++.+ ++||-.=. |. ...
T Consensus 180 ~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~-~ipvia~G----GI~~~~ 254 (311)
T 1ep3_A 180 PIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-DIPIIGMG----GVANAQ 254 (311)
T ss_dssp HHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC-SSCEEECS----SCCSHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc-CCCEEEEC----CcCCHH
Confidence 67889999999999996531 11112 12357888888887 78876532 33 245
Q ss_pred HHHHHHHhcCCEEEeccc
Q psy15244 881 TTLACVKAGADIVDVAAD 898 (1427)
Q Consensus 881 n~laAi~AGad~VD~av~ 898 (1427)
.+.+++++|||.|-..-.
T Consensus 255 d~~~~l~~GAd~V~vg~~ 272 (311)
T 1ep3_A 255 DVLEMYMAGASAVAVGTA 272 (311)
T ss_dssp HHHHHHHHTCSEEEECTH
T ss_pred HHHHHHHcCCCEEEECHH
Confidence 677788899999865543
No 396
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=77.32 E-value=7.2 Score=44.16 Aligned_cols=75 Identities=13% Similarity=0.120 Sum_probs=50.1
Q ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccc-eEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 57 MEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVD-QAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 57 ~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aD-e~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
|++|||.| .|.++..+++.+.+.|++++++........ ..+.+ -.+.. .+..+.+.+.++.++.++|+|
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~-------~D~~~~~~~~~~~~~~~~d~v 71 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE--DAITEGAKFYN-------GDLRDKAFLRDVFTQENIEAV 71 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGSCTTSEEEE-------CCTTCHHHHHHHHHHSCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch--hhcCCCcEEEE-------CCCCCHHHHHHHHhhcCCCEE
Confidence 46899998 699999999999999999888864433211 11111 11111 134567778888877789998
Q ss_pred EeCCCc
Q psy15244 135 HPGYGF 140 (1427)
Q Consensus 135 ~pg~gf 140 (1427)
+-..+.
T Consensus 72 ih~a~~ 77 (330)
T 2c20_A 72 MHFAAD 77 (330)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 866553
No 397
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=77.26 E-value=9.6 Score=41.81 Aligned_cols=88 Identities=22% Similarity=0.160 Sum_probs=65.1
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHH
Q psy15244 782 LVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREK 861 (1427)
Q Consensus 782 ~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~ 861 (1427)
|....+..++.+. . .+... .+.+...++++.+.+.|++.|-+--. +|. ..+.|+.++++
T Consensus 24 m~~~~~~l~~~~v---v---~Vir~----------~~~~~a~~~a~al~~gGi~~iEvt~~----t~~-a~e~I~~l~~~ 82 (232)
T 4e38_A 24 MSTINNQLKALKV---I---PVIAI----------DNAEDIIPLGKVLAENGLPAAEITFR----SDA-AVEAIRLLRQA 82 (232)
T ss_dssp HHHHHHHHHHHCE---E---EEECC----------SSGGGHHHHHHHHHHTTCCEEEEETT----STT-HHHHHHHHHHH
T ss_pred HHHHHHHHHhCCE---E---EEEEc----------CCHHHHHHHHHHHHHCCCCEEEEeCC----CCC-HHHHHHHHHHh
Confidence 5556677777776 3 22222 55678999999999999999998432 343 56889999999
Q ss_pred cCCceEEEeecCCcchHHHHHHHHHHhcCCEEE
Q psy15244 862 YPNILIHVHTHDMAGTGVATTLACVKAGADIVD 894 (1427)
Q Consensus 862 ~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD 894 (1427)
+|++-++.-+= +-...+-+|++|||+.|-
T Consensus 83 ~~~~~iGaGTV----lt~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 83 QPEMLIGAGTI----LNGEQALAAKEAGATFVV 111 (232)
T ss_dssp CTTCEEEEECC----CSHHHHHHHHHHTCSEEE
T ss_pred CCCCEEeECCc----CCHHHHHHHHHcCCCEEE
Confidence 99888876542 236777899999999995
No 398
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=77.19 E-value=34 Score=42.48 Aligned_cols=194 Identities=13% Similarity=0.093 Sum_probs=113.0
Q ss_pred eecC----cccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHH-HHHHhCCCCcee
Q psy15244 662 TDTT----FRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLA-ELRELIPNIPFQ 736 (1427)
Q Consensus 662 ~DtT----lRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~-~lr~~~p~~~~q 736 (1427)
+.+| |+||.+. .+.++.++.|..+-+ .|.+.|.++.|+..- -.+..++|+- .+++. .+++++
T Consensus 322 ~N~Tg~dsf~~~~~~-----~~~~~a~~~A~~~v~--~GAdiIDIgpg~~~v-----~~~ee~~rvv~~i~~~-~~vpis 388 (566)
T 1q7z_A 322 INPAGRKKLWAEMQK-----GNEEIVIKEAKTQVE--KGAEVLDVNFGIESQ-----IDVRYVEKIVQTLPYV-SNVPLS 388 (566)
T ss_dssp ECCTTCHHHHHHHHT-----TCCHHHHHHHHHHHH--TTCSEEEEECSSGGG-----SCHHHHHHHHHHHHHH-TCSCEE
T ss_pred ecCCCChhHHHHhhc-----CCHHHHHHHHHHHHH--CCCCEEEECCCCCCC-----CHHHHHHHHHHHHHhh-CCceEE
Confidence 5566 8888653 345889999998877 799999999665310 0122334432 33332 355554
Q ss_pred eeecccccccccCCCcchHHHHHHHHHhc--CCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCC
Q psy15244 737 MILRGNSLVGYSNYSPAEVGAFCRLASQA--GIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNK 814 (1427)
Q Consensus 737 ml~Rg~n~vgy~~~~~nvv~~~v~~a~~~--Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~ 814 (1427)
.=. + .-+.+++|.++ |.+++.=....+ +++....+.+++.|. -+ +.+.+.++ .|.
T Consensus 389 IDT----------~----~~~v~eaal~~~~G~~iINdis~~~--~~~~~~~~~~~~~g~---~v-V~m~~~~~--~p~- 445 (566)
T 1q7z_A 389 LDI----------Q----NVDLTERALRAYPGRSLFNSAKVDE--EELEMKINLLKKYGG---TL-IVLLMGKD--VPK- 445 (566)
T ss_dssp EEC----------C----CHHHHHHHHHHCSSCCEEEEEESCH--HHHHHHHHHHHHHCC---EE-EEESCSSS--CCC-
T ss_pred EeC----------C----CHHHHHHHHHhcCCCCEEEECCcch--hhHHHHHHHHHHhCC---eE-EEEeCCCC--CcC-
Confidence 321 2 23346777777 999876555544 566777888888887 22 11222211 221
Q ss_pred CCCC--HHHHHHHHHHHHHCCC-CEEEE---ccccCcCCHHHHHHHHHHHHHH--cCCceEEEeecCC-c------chHH
Q psy15244 815 KKYS--LNYYEDLAKQLVESGA-QVLCL---KDMAGLLKPTAAKLLIGSFREK--YPNILIHVHTHDM-A------GTGV 879 (1427)
Q Consensus 815 ~~~~--~~~~~~~a~~l~~~Ga-d~i~i---~Dt~G~l~P~~~~~lv~~lr~~--~p~ipi~~H~Hnd-~------GlA~ 879 (1427)
.|+ .+++.+.++.+.++|+ +.|.| ..+.|..+ ...++++.++.- . +.|+-+=..|- + .+..
T Consensus 446 -t~~~~~~~l~~~~~~a~~~Gi~~~IilDPg~~~igfgk--~~~~~l~~~~~~~~~-g~p~l~G~Snksf~~~~~~~l~~ 521 (566)
T 1q7z_A 446 -SFEERKEYFEKALKILERHDFSDRVIFDPGVLPLGAEG--KPVEVLKTIEFISSK-GFNTTVGLSNLSFGLPDRSYYNT 521 (566)
T ss_dssp -SHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCCTTTTC--CHHHHHHHHHHHHHT-TCEECCBGGGGSTTSTTHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHCCCCCcEEEeCCCCcccCcH--HHHHHHHHHHHHHhC-CCCEEEEeCcccccCCHHHHHHH
Confidence 133 6788888889999999 45443 23336666 555556555532 3 56765433332 1 2222
Q ss_pred HHHHHHHHhcCCEEEe
Q psy15244 880 ATTLACVKAGADIVDV 895 (1427)
Q Consensus 880 An~laAi~AGad~VD~ 895 (1427)
.-+..|+++|++++=+
T Consensus 522 t~a~~a~~~G~~i~rv 537 (566)
T 1q7z_A 522 AFLVLGISKGLSSAIM 537 (566)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 2335678899998733
No 399
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=77.13 E-value=5.1 Score=43.47 Aligned_cols=68 Identities=22% Similarity=0.260 Sum_probs=56.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEE
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIV 893 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~V 893 (1427)
.+.+..+.+++.+.+.|++.|-+. +-+| ...+.|+.+++++|++-|+..+=-| ...+-+|++|||+.|
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt----~~t~-~a~~~I~~l~~~~p~~~IGAGTVlt----~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVT----LRTE-AGLAAISAIKKAVPEAIVGAGTVCT----ADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEE----TTST-THHHHHHHHHHHCTTSEEEEECCCS----HHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe----CCCc-cHHHHHHHHHHHCCCCeEeeccccC----HHHHHHHHHcCCCEE
Confidence 567889999999999999999984 2334 4667899999999998898876654 567789999999998
No 400
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=77.10 E-value=3.9 Score=46.36 Aligned_cols=107 Identities=26% Similarity=0.361 Sum_probs=61.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEE--------ccccCcC--CHH-HHHHHHHHHHHHcCCce---------EEEe
Q psy15244 811 NPNKKKYSLNYYEDLAKQLVESGAQVLCL--------KDMAGLL--KPT-AAKLLIGSFREKYPNIL---------IHVH 870 (1427)
Q Consensus 811 ~p~~~~~~~~~~~~~a~~l~~~Gad~i~i--------~Dt~G~l--~P~-~~~~lv~~lr~~~p~ip---------i~~H 870 (1427)
-|.-.+++.+.+++.++++.+.|+..|.| ||..|.. .|. -+.+-|+++|+++|++- ..-|
T Consensus 50 MPGv~r~sid~l~~~~~~~~~~Gi~~v~LFgvp~~~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~vitDvcLc~YT~H 129 (330)
T 1pv8_A 50 LPGVARYGVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLVACDVCLCPYTSH 129 (330)
T ss_dssp STTCEEECHHHHHHHHHHHHHHTCCEEEEEECC--------------CCSHHHHHHHHHHHHSTTSEEEEEECCC-----
T ss_pred CCCceeecHHHHHHHHHHHHHCCCCEEEEecCCcccCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCC
Confidence 35556899999999999999999987776 6666654 232 26778999999999754 3468
Q ss_pred ecCCcc--hH-HH----------HHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCCC
Q psy15244 871 THDMAG--TG-VA----------TTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKRC 923 (1427)
Q Consensus 871 ~Hnd~G--lA-~A----------n~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~t 923 (1427)
.||-.= -+ +- .++.-.+||||+|-- ++|=- | -...+=.+|...|+..
T Consensus 130 GHcGil~~~g~v~ND~Tl~~La~~Als~A~AGAdiVAP--SdMMD--G--rV~aIR~aLd~~G~~~ 189 (330)
T 1pv8_A 130 GHCGLLSENGAFRAEESRQRLAEVALAYAKAGCQVVAP--SDMMD--G--RVEAIKEALMAHGLGN 189 (330)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHTCSEEEE--CC--C--C--HHHHHHHHHHHTTCTT
T ss_pred CceeEECCCCcCccHHHHHHHHHHHHHHHHcCCCeeec--ccccc--c--HHHHHHHHHHhCCCcC
Confidence 887321 01 22 366778999999943 33321 1 2345666777777653
No 401
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=76.87 E-value=7.8 Score=42.17 Aligned_cols=73 Identities=19% Similarity=0.162 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHCCCCEEEEccccCcC-CHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEecc
Q psy15244 821 YYEDLAKQLVESGAQVLCLKDMAGLL-KPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 821 ~~~~~a~~l~~~Gad~i~i~Dt~G~l-~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av 897 (1427)
...++++.+.+.|++.|.+.|+.+.. ......++++.+++.+ ++||.+|.--.. ...+..++++|||.|....
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~-~ipvi~~g~i~~---~~~~~~~~~~Gad~V~i~~ 107 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAV-SIPVLVGGGVRS---LEDATTLFRAGADKVSVNT 107 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHC-SSCEEEESSCCS---HHHHHHHHHHTCSEEEESH
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhc-CCCEEEECCCCC---HHHHHHHHHcCCCEEEECh
Confidence 46788999999999999998887642 2234567889999887 899887754332 2455778889999998663
No 402
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=76.72 E-value=25 Score=39.92 Aligned_cols=162 Identities=14% Similarity=0.093 Sum_probs=92.2
Q ss_pred CCceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCCh------HHHHHHHHHHHHHhcCCCcEEEEEEEe
Q psy15244 732 NIPFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNS------VPNLVKGMDAVQQVTGGSTIVEATICY 805 (1427)
Q Consensus 732 ~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd------~~~~~~~i~~a~~~G~~~~~v~~~i~~ 805 (1427)
++++-+-+.+.+.+. ...++..+-.-++.|.+.|.|.+-+-..+.+ ++++...++.+++.|. .+-. .+
T Consensus 105 ~~~lil~l~~~t~~~-~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~Gl---pvIi--e~ 178 (295)
T 3glc_A 105 NRPVVLRASGANSIL-AELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGM---PTMA--VT 178 (295)
T ss_dssp CCCEEEECEECCCTT-SCTTCCEECSCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTC---CEEE--EE
T ss_pred CccEEEEEcCCCcCC-CCCccchhHHHHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCC---EEEE--EC
Confidence 445554444444222 1222333323488999999998665444322 3456677888888887 3322 11
Q ss_pred eccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecC--CcchHHHHHH
Q psy15244 806 AGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHD--MAGTGVATTL 883 (1427)
Q Consensus 806 t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hn--d~GlA~An~l 883 (1427)
. . .+. -..+.+.+...++.+.++|||.|-..=| +. .++.+.+.. .+||-+=.-. +.--.+.+.-
T Consensus 179 ~--~-G~~-~~~d~e~i~~aariA~elGAD~VKt~~t-----~e----~~~~vv~~~-~vPVv~~GG~~~~~~~~l~~v~ 244 (295)
T 3glc_A 179 G--V-GKD-MVRDQRYFSLATRIAAEMGAQIIKTYYV-----EK----GFERIVAGC-PVPIVIAGGKKLPEREALEMCW 244 (295)
T ss_dssp C--C------CCSHHHHHHHHHHHHHTTCSEEEEECC-----TT----THHHHHHTC-SSCEEEECCSCCCHHHHHHHHH
T ss_pred C--C-CCc-cCCCHHHHHHHHHHHHHhCCCEEEeCCC-----HH----HHHHHHHhC-CCcEEEEECCCCCHHHHHHHHH
Confidence 1 0 111 1257787888999999999999888733 22 245555555 5776553322 2334567778
Q ss_pred HHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 884 ACVKAGADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 884 aAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
.|+++||+.+-+.-+=+- .+....++.+|.
T Consensus 245 ~ai~aGA~Gv~vGRnI~q----~~dp~~~~~al~ 274 (295)
T 3glc_A 245 QAIDQGASGVDMGRNIFQ----SDHPVAMMKAVQ 274 (295)
T ss_dssp HHHHTTCSEEEESHHHHT----SSSHHHHHHHHH
T ss_pred HHHHhCCeEEEeHHHHhc----CcCHHHHHHHHH
Confidence 999999997654332221 133445555554
No 403
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=76.67 E-value=8.3 Score=43.87 Aligned_cols=77 Identities=6% Similarity=-0.079 Sum_probs=50.5
Q ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccC-ccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 57 MEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFS-AHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 57 ~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s-~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
.++|||.| .|.++..+++.+.+.|++++++........ ....+..-.+.. .+..+.+.+.+++++.++|+|
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~-------~Dl~d~~~~~~~~~~~~~D~v 92 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIE-------GSVTDAGLLERAFDSFKPTHV 92 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEE-------CCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEE-------eeCCCHHHHHHHHhhcCCCEE
Confidence 46899999 599999999999999999988875433211 001111111221 134567777777776689998
Q ss_pred EeCCCc
Q psy15244 135 HPGYGF 140 (1427)
Q Consensus 135 ~pg~gf 140 (1427)
+-.-+.
T Consensus 93 ih~A~~ 98 (330)
T 2pzm_A 93 VHSAAA 98 (330)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 866553
No 404
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=76.67 E-value=2.4 Score=44.16 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=31.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHc-CCEEEEEecCCCc
Q psy15244 57 MEKILIANRSEVAIRVARACNEM-GIKSVGIYSEQDK 92 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~el-Gi~~vav~s~~d~ 92 (1427)
.++|+|+|.|.++..+++.+++. |+++++++.+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~ 75 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEA 75 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHH
Confidence 45899999999999999999999 9999988776543
No 405
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=76.65 E-value=17 Score=41.67 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=80.4
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccCc---CCHHHHHHHHHHHHHHc-CCceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAGL---LKPTAAKLLIGSFREKY-PNILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~---l~P~~~~~lv~~lr~~~-p~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+|= |+.++-.++++...+.. ..+||-.|+ +|+.--++..+..|.++|
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 119 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLG 119 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 3689999999999999999999999999994 67888889999988876 368888876 588888888999999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..--.- .|+-+.++..++
T Consensus 120 adavlv~~P~y~----~~s~~~l~~~f~ 143 (315)
T 3na8_A 120 AEAVMVLPISYW----KLNEAEVFQHYR 143 (315)
T ss_dssp CSEEEECCCCSS----CCCHHHHHHHHH
T ss_pred CCEEEECCCCCC----CCCHHHHHHHHH
Confidence 999876543332 245567776665
No 406
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=76.54 E-value=47 Score=34.96 Aligned_cols=168 Identities=14% Similarity=0.084 Sum_probs=88.7
Q ss_pred HHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHh--cCCCcEEEEEEEeeccCCCCCCCCCC-HHHHHHHHHHHHHCCC
Q psy15244 758 FCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQV--TGGSTIVEATICYAGDLTNPNKKKYS-LNYYEDLAKQLVESGA 834 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~--G~~~~~v~~~i~~t~d~~~p~~~~~~-~~~~~~~a~~l~~~Ga 834 (1427)
.++.+.+ |++.+.|-+..+ +..-...++..++. +. .+..-+. . +| ++. .++.+.++||
T Consensus 18 ~~~~~~~-~v~~iev~~~~~-~~~g~~~i~~l~~~~~~~---~i~~~l~-~----------~di~~~---~~~~a~~~Ga 78 (207)
T 3ajx_A 18 LAGKVAE-YVDIIELGTPLI-KAEGLSVITAVKKAHPDK---IVFADMK-T----------MDAGEL---EADIAFKAGA 78 (207)
T ss_dssp HHHHHGG-GCSEEEECHHHH-HHHCTHHHHHHHHHSTTS---EEEEEEE-E----------CSCHHH---HHHHHHHTTC
T ss_pred HHHHhhc-cCCEEEECcHHH-HhhCHHHHHHHHHhCCCC---eEEEEEE-e----------cCccHH---HHHHHHhCCC
Confidence 3444444 889999977653 22223456666665 44 3333222 2 22 333 3467788999
Q ss_pred CEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHH
Q psy15244 835 QVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVS 914 (1427)
Q Consensus 835 d~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~ 914 (1427)
|.+.+-+..| +....++++.+++. ++++++-+|+..-.. ....++.+.|+|+|-....-.++..|+...++.+.
T Consensus 79 d~v~vh~~~~---~~~~~~~~~~~~~~--g~~~gv~~~s~~~p~-~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~i~ 152 (207)
T 3ajx_A 79 DLVTVLGSAD---DSTIAGAVKAAQAH--NKGVVVDLIGIEDKA-TRAQEVRALGAKFVEMHAGLDEQAKPGFDLNGLLA 152 (207)
T ss_dssp SEEEEETTSC---HHHHHHHHHHHHHH--TCEEEEECTTCSSHH-HHHHHHHHTTCSEEEEECCHHHHTSTTCCTHHHHH
T ss_pred CEEEEeccCC---hHHHHHHHHHHHHc--CCceEEEEecCCChH-HHHHHHHHhCCCEEEEEecccccccCCCchHHHHH
Confidence 9999877655 34455666666654 456777666321111 12233446699988332211122344444323333
Q ss_pred HHH--hC--CCCCCCChhhHHHHHHHHHHHhCCCCCCCCcccccchhhh
Q psy15244 915 CLE--NT--DKRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWRCGIDLH 959 (1427)
Q Consensus 915 ~L~--~~--g~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~~~f~~ 959 (1427)
.+. .. -..-|++.+.+.++.+ . ..+--+||+.+|..
T Consensus 153 ~~~~~~~pi~v~GGI~~~~~~~~~~-----a----Gad~vvvGsaI~~~ 192 (207)
T 3ajx_A 153 AGEKARVPFSVAGGVKVATIPAVQK-----A----GAEVAVAGGAIYGA 192 (207)
T ss_dssp HHHHHTSCEEEESSCCGGGHHHHHH-----T----TCSEEEESHHHHTS
T ss_pred HhhCCCCCEEEECCcCHHHHHHHHH-----c----CCCEEEEeeeccCC
Confidence 333 22 2346788764443311 1 23456788888764
No 407
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=76.36 E-value=2.5 Score=46.18 Aligned_cols=33 Identities=12% Similarity=0.148 Sum_probs=29.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecC
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGIKSVGIYSE 89 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi~~vav~s~ 89 (1427)
-++|||+|.|++|.+.++.+.+.|..++++..+
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 479999999999999999999999998888554
No 408
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=76.30 E-value=74 Score=35.63 Aligned_cols=155 Identities=10% Similarity=0.011 Sum_probs=88.2
Q ss_pred HHHHHHHhhcCCccEEeccCCCchhhhhhccccC--hHH----HHHHHHHhCCCCceeeeecccccccccCCCcc---hH
Q psy15244 685 KVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKEC--PWE----RLAELRELIPNIPFQMILRGNSLVGYSNYSPA---EV 755 (1427)
Q Consensus 685 ~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~--p~e----rl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~n---vv 755 (1427)
.-|+.+++ +|++.|=+|.+ .--+.+.+-+-. .++ ..+.+++..++.++. + -.+|..|..| .+
T Consensus 28 ~sA~l~e~--aG~d~ilvGdS-l~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv----a--D~pfgsy~~s~~~a~ 98 (275)
T 1o66_A 28 SFAALMDD--AGVEMLLVGDS-LGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIV----S--DLPFGAYQQSKEQAF 98 (275)
T ss_dssp HHHHHHHH--TTCCEEEECTT-HHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEE----E--ECCTTSSSSCHHHHH
T ss_pred HHHHHHHH--cCCCEEEECHH-HHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEE----E--ECCCCCccCCHHHHH
Confidence 45677788 79999954322 212222222211 122 334555555544322 2 2455555433 33
Q ss_pred HHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeec-------cCCCCCCCCCCHHHHHHHHHH
Q psy15244 756 GAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAG-------DLTNPNKKKYSLNYYEDLAKQ 828 (1427)
Q Consensus 756 ~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~-------d~~~p~~~~~~~~~~~~~a~~ 828 (1427)
+ .+.+..++|++-+.|=+.. .+...|+++.++|. -+.+.|-.|- +|.--.++ ...+.+++-++.
T Consensus 99 ~-na~rl~kaGa~aVklEdg~----e~~~~I~al~~agI---pV~gHiGLtPQs~~~~ggf~v~grt-~~a~~~i~rA~a 169 (275)
T 1o66_A 99 A-AAAELMAAGAHMVKLEGGV----WMAETTEFLQMRGI---PVCAHIGLTPQSVFAFGGYKVQGRG-GKAQALLNDAKA 169 (275)
T ss_dssp H-HHHHHHHTTCSEEEEECSG----GGHHHHHHHHHTTC---CEEEEEESCGGGTTC------------CHHHHHHHHHH
T ss_pred H-HHHHHHHcCCcEEEECCcH----HHHHHHHHHHHcCC---CeEeeeccCceeecccCCeEEEeCh-HHHHHHHHHHHH
Confidence 2 2345566999999999983 56667778888888 4444433221 11111122 345888999999
Q ss_pred HHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCce
Q psy15244 829 LVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNIL 866 (1427)
Q Consensus 829 l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ip 866 (1427)
++++||+.|.+- +.|. ++.+.+.+++ ++|
T Consensus 170 ~~eAGA~~ivlE-----~vp~---~~a~~it~~l-~iP 198 (275)
T 1o66_A 170 HDDAGAAVVLME-----CVLA---ELAKKVTETV-SCP 198 (275)
T ss_dssp HHHTTCSEEEEE-----SCCH---HHHHHHHHHC-SSC
T ss_pred HHHcCCcEEEEe-----cCCH---HHHHHHHHhC-CCC
Confidence 999999999884 2343 4566777777 677
No 409
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=76.29 E-value=4.4 Score=44.70 Aligned_cols=117 Identities=8% Similarity=0.033 Sum_probs=78.4
Q ss_pred HHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHh---------cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHH
Q psy15244 756 GAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQV---------TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLA 826 (1427)
Q Consensus 756 ~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~---------G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a 826 (1427)
+.+++.+.++|.|.+-+-.-.. +.+...++.+++. |. .+...+ +|. +..+.+..+.
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~--~~~~~~i~~i~~~~~~~~~~~~g~---~~gv~l-------~p~---Tp~~~l~~~l 146 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQY--HDFALTIEWLAKQKTTYANQVYPV---LIGACL-------CPE---TPISELEPYL 146 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCT--TSHHHHHHHHTTCEEEETTEEEEC---EEEEEE-------CTT---SCGGGGTTTT
T ss_pred HHHHHHHHHcCCCEEEEecCCc--ccHHHHHHHHHhcccccccccCCc---eEEEEE-------eCC---ChHHHHHHHh
Confidence 6689999999999966655544 2467788888888 87 665554 331 2222222222
Q ss_pred HHHHHCCCCEEEE----ccccCcCCHHHHHHHHHHHHHHcC----CceEEEeecCCcchHHHHHHHHHH--hcCCEEEec
Q psy15244 827 KQLVESGAQVLCL----KDMAGLLKPTAAKLLIGSFREKYP----NILIHVHTHDMAGTGVATTLACVK--AGADIVDVA 896 (1427)
Q Consensus 827 ~~l~~~Gad~i~i----~Dt~G~l~P~~~~~lv~~lr~~~p----~ipi~~H~Hnd~GlA~An~laAi~--AGad~VD~a 896 (1427)
.++|.|.+ .-..|-..+....+.++.+|+... +++|.+ |-|....|.-.+++ +|||++=+.
T Consensus 147 -----~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~v----dGGI~~~~~~~~~~~~aGad~~VvG 217 (237)
T 3cu2_A 147 -----DQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINI----DGSMTLELAKYFKQGTHQIDWLVSG 217 (237)
T ss_dssp -----TTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEE----ESSCCHHHHHHHHHSSSCCCCEEEC
T ss_pred -----hcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEE----ECCcCHHHHHHHHHhCCCCcEEEEe
Confidence 26887755 223344456667777888887763 467776 67888999999999 999987443
No 410
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=76.26 E-value=31 Score=39.66 Aligned_cols=242 Identities=10% Similarity=0.038 Sum_probs=117.2
Q ss_pred CCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHH
Q psy15244 750 YSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQL 829 (1427)
Q Consensus 750 ~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l 829 (1427)
++.+..-+.++...+.|++.|-+-.+...-..++ .++.+++... +.... .++ +...+.+...++.+
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e-~v~~i~~~~~-~~~i~---~l~---------r~~~~~i~~a~~al 90 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFN-SVVEITKAVT-RPTIC---ALT---------RAKEADINIAGEAL 90 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHH-HHHHHHHHCC-SSEEE---EEC---------CSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHH-HHHHHHHhCC-CCEEE---Eee---------cCCHHHHHHHHHhh
Confidence 4555577788888999999999976653333332 2343444332 11221 111 35556665556666
Q ss_pred HHCCCCEEEEccccCcCC--------H----HHHHHHHHHHHHHcCCceEEEeec----CCcchHHHHHHHHHHhcCCEE
Q psy15244 830 VESGAQVLCLKDMAGLLK--------P----TAAKLLIGSFREKYPNILIHVHTH----DMAGTGVATTLACVKAGADIV 893 (1427)
Q Consensus 830 ~~~Gad~i~i~Dt~G~l~--------P----~~~~~lv~~lr~~~p~ipi~~H~H----nd~GlA~An~laAi~AGad~V 893 (1427)
..+|+++|.+.+++--.. + +.+.+.|+..|+. ++.+.|.+= .+....+.-+-++.++||+.|
T Consensus 91 ~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~--g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i 168 (325)
T 3eeg_A 91 RFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKV--VHEVEFFCEDAGRADQAFLARMVEAVIEAGADVV 168 (325)
T ss_dssp TTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTT--SSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEE
T ss_pred cccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHC--CCEEEEEccccccchHHHHHHHHHHHHhcCCCEE
Confidence 677999999876543211 1 1244566666654 466777653 233344455567788999987
Q ss_pred EeccccCCCCCCCCcHHHHHHHHHhC-C----CCCCCChhhHHHHHHHHHHHhCCCCCCCCcccccchhhhhHHHHHHHH
Q psy15244 894 DVAADSMSGICSQPAMGTIVSCLENT-D----KRCGIDLHDVCDYSSYWRKVRELYAPAHNLLWRCGIDLHDVCDYSSYW 968 (1427)
Q Consensus 894 D~av~GmG~~tgn~~lE~vv~~L~~~-g----~~tgidl~~L~~l~~~v~~~~g~~~~~~kpivG~~~f~~~~~~~~~~~ 968 (1427)
++.-+-|..-.-...+++..|+.. + ...++.. -|-+ -.-.+..+
T Consensus 169 --~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~--------------------------Hnd~---GlA~AN~l 217 (325)
T 3eeg_A 169 --NIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHC--------------------------HNDL---GLATANSL 217 (325)
T ss_dssp --ECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECB--------------------------CCTT---SCHHHHHH
T ss_pred --EecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEe--------------------------CCCC---CHHHHHHH
Confidence 444444432222355666666542 2 1111111 1111 11122333
Q ss_pred HHhhhhcCCCCCCCCCcCcccEEEecCCCccH-HHHHHHHHH----CCC----CHHHHHHHHHHHHHHcCCCCccccchh
Q psy15244 969 RKVRELYAPFECTDLKAASSEAYLYEIPGGQY-TNLKFRTMS----FGL----DFEDVKRAYRTANFLLGDIIKCTPSSK 1039 (1427)
Q Consensus 969 ~~~~~~Y~~f~~~~~~g~~~~v~~~~~pGg~~-snl~~ql~~----~gl----~~~ev~~~~~~v~~~lG~~~~vTP~sq 1039 (1427)
.....--..++ ..+.| +++-.|-.- ..+...|+. +|+ +++.+.+.-..+.+.+|.+ +.|..-
T Consensus 218 aA~~aGa~~vd-~tv~G------lGer~GN~~lE~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g~~--~~~~~p 288 (325)
T 3eeg_A 218 AALQNGARQVE-CTING------IGERAGNTALEEVVMAMECHKETLGLETGINHKKLVPISHLVSTLMRMQ--VQSNKA 288 (325)
T ss_dssp HHHHHTCCEEE-EBGGG------CCSTTCCCBHHHHHHHHHHTHHHHCEECCCCGGGHHHHHHHHHHHTTC---------
T ss_pred HHHHhCCCEEE-Eeccc------ccccccchhHHHHHHHHHhhhhccCCCCCcCHHHHHHHHHHHHHHhCCC--CCCCCC
Confidence 33322223344 33332 223333321 133334442 344 7888888888888999976 456667
Q ss_pred hHHHHHHH
Q psy15244 1040 VVADLAIF 1047 (1427)
Q Consensus 1040 ~vg~~a~~ 1047 (1427)
+||..|+-
T Consensus 289 ~vG~~af~ 296 (325)
T 3eeg_A 289 IVGRNAFA 296 (325)
T ss_dssp --------
T ss_pred ccchhHHH
Confidence 89998854
No 411
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=76.25 E-value=9.3 Score=44.32 Aligned_cols=80 Identities=10% Similarity=-0.025 Sum_probs=50.9
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccC--ccccccc--------eEEEcCCCCCcccCCCCHHHHH
Q psy15244 55 KTMEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFS--AHRTKVD--------QAFLVGKGMPPVAAYLNIPEII 123 (1427)
Q Consensus 55 ~~~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s--~~~~~aD--------e~~~i~~~~~~~~~yldi~~Ii 123 (1427)
.|+++|||.| .|.|+..+++.+.+.|++++++........ ....+.. ....+ ..+..+.+.+.
T Consensus 26 ~M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Dl~d~~~~~ 99 (381)
T 1n7h_A 26 EPRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH------YADLTDASSLR 99 (381)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEE------ECCTTCHHHHH
T ss_pred hhCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEE------ECCCCCHHHHH
Confidence 3458999999 599999999999999999988865443210 0011110 11111 12345677788
Q ss_pred HHHHhcCCCEEEeCCCc
Q psy15244 124 CIAKNNNVDAIHPGYGF 140 (1427)
Q Consensus 124 ~ia~~~~vDaI~pg~gf 140 (1427)
++.+..++|+|+-.-+.
T Consensus 100 ~~~~~~~~d~Vih~A~~ 116 (381)
T 1n7h_A 100 RWIDVIKPDEVYNLAAQ 116 (381)
T ss_dssp HHHHHHCCSEEEECCSC
T ss_pred HHHHhcCCCEEEECCcc
Confidence 87777788988866543
No 412
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=76.23 E-value=34 Score=38.10 Aligned_cols=187 Identities=14% Similarity=0.128 Sum_probs=107.2
Q ss_pred hHHHHHHHHHhc--CCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15244 754 EVGAFCRLASQA--GIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVE 831 (1427)
Q Consensus 754 vv~~~v~~a~~~--Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~ 831 (1427)
.+++.+++|.+. |+.-+- ...+++....+ ..+..|.....+...+ +-|.. ..+.+--+.-++++.+
T Consensus 29 ~i~~lc~eA~~~~~~~~aVc--V~p~~v~~a~~---~L~~~g~~~v~v~tVi------gFP~G-~~~~~~Kv~E~~~Av~ 96 (260)
T 1p1x_A 29 KVIALCHQAKTPVGNTAAIC--IYPRFIPIARK---TLKEQGTPEIRIATVT------NFPHG-NDDIDIALAETRAAIA 96 (260)
T ss_dssp HHHHHHHHTEETTEECSEEE--CCGGGHHHHHH---HHHHTTCTTSEEEEEE------STTTC-CSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCceEEE--ECHHHHHHHHH---HhhhcCCCCceEEEEe------CCCCC-CCcHHHHHHHHHHHHH
Confidence 356677777777 776654 33444544333 3332121011333222 23432 4677777777889999
Q ss_pred CCCCEEEEccccCcC---CHHHHHHHHHHHHHHcC--Cce----EEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCC
Q psy15244 832 SGAQVLCLKDMAGLL---KPTAAKLLIGSFREKYP--NIL----IHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSG 902 (1427)
Q Consensus 832 ~Gad~i~i~Dt~G~l---~P~~~~~lv~~lr~~~p--~ip----i~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~ 902 (1427)
.|||.|-+.=-.|.+ .-..+++-+.++++..+ +.+ |+...=++.-+=...+..|+++|||+|-++. |+
T Consensus 97 ~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVKTST-Gf-- 173 (260)
T 1p1x_A 97 YGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTST-GK-- 173 (260)
T ss_dssp HTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEECCC-SC--
T ss_pred cCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCC-CC--
Confidence 999988776556633 34667888888887653 244 2222223433223566778999999999985 22
Q ss_pred CCCCCcHHHHHHHHHh-----CCCCC------CCC-hhhHHHHHHHHHHHhCCC-CCCCCcccccc
Q psy15244 903 ICSQPAMGTIVSCLEN-----TDKRC------GID-LHDVCDYSSYWRKVRELY-APAHNLLWRCG 955 (1427)
Q Consensus 903 ~tgn~~lE~vv~~L~~-----~g~~t------gid-l~~L~~l~~~v~~~~g~~-~~~~kpivG~~ 955 (1427)
.+|++..|.+..+.+. .+... |+. ++...+.-+...+.+|-. +.+..--+|..
T Consensus 174 ~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~~lG~~w~~~~~~RiGtS 239 (260)
T 1p1x_A 174 VAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGAS 239 (260)
T ss_dssp SSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHHHHCTTSCSTTTBCEEES
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhhhccccccccCceEeecc
Confidence 3477888866655544 33222 333 445555555555666654 44455555654
No 413
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=76.16 E-value=28 Score=46.50 Aligned_cols=151 Identities=16% Similarity=0.133 Sum_probs=93.7
Q ss_pred HHHHHHHhCCCCceeeee-cccccccccCCCcchHHHHHHHHHhcCCCEEEEeccC--------------ChHHHHHHHH
Q psy15244 722 RLAELRELIPNIPFQMIL-RGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPL--------------NSVPNLVKGM 786 (1427)
Q Consensus 722 rl~~lr~~~p~~~~qml~-Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~--------------nd~~~~~~~i 786 (1427)
+++.+++..|+.++-.-+ .|. ..+...+.++++.+.|+|.|-|-.+. ++.+.+.+.+
T Consensus 624 ~i~~~~~~~~~~~~i~~i~~g~--------~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv 695 (1025)
T 1gte_A 624 SVTELKADFPDNIVIASIMCSY--------NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 695 (1025)
T ss_dssp HHHHHHHHCTTSEEEEEECCCS--------CHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHH
T ss_pred HHHHHHhcCCCCCeEEEecCCC--------CHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHH
Confidence 355667767776643322 221 12234445677778899998886542 3456677788
Q ss_pred HHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccc-----------------------
Q psy15244 787 DAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDM----------------------- 842 (1427)
Q Consensus 787 ~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt----------------------- 842 (1427)
+.+++. +. -+.+- . .|+. +.+.++++.+.++|+|.|.+.-|
T Consensus 696 ~~v~~~~~~---Pv~vK--~-----~~~~-----~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~ 760 (1025)
T 1gte_A 696 RWVRQAVQI---PFFAK--L-----TPNV-----TDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRT 760 (1025)
T ss_dssp HHHHHHCSS---CEEEE--E-----CSCS-----SCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBB
T ss_pred HHHHHhhCC---ceEEE--e-----CCCh-----HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccc
Confidence 888876 44 22221 1 2221 13778899999999999998322
Q ss_pred --cCcCCH---HHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccc
Q psy15244 843 --AGLLKP---TAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAAD 898 (1427)
Q Consensus 843 --~G~l~P---~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~ 898 (1427)
-|+.-| ..+.+++..+++.+|++||-.=.--..+..+ .+++.+||+.|-..-.
T Consensus 761 ~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da---~~~l~~Ga~~v~vg~~ 818 (1025)
T 1gte_A 761 TYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESG---LQFLHSGASVLQVCSA 818 (1025)
T ss_dssp CCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHH---HHHHHTTCSEEEESHH
T ss_pred cCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHH---HHHHHcCCCEEEEeec
Confidence 122211 1234789999998888998776666565554 4555589999877643
No 414
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=76.14 E-value=56 Score=36.68 Aligned_cols=130 Identities=11% Similarity=-0.082 Sum_probs=67.1
Q ss_pred ccccccccCCCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHH
Q psy15244 648 EFVNSVRKLKHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELR 727 (1427)
Q Consensus 648 ~~~~~~~~~~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr 727 (1427)
++++-+...+++-+.=-|+||-.+. . +.....+.+.+ +|++.||+|+... . .+...+ .+.++.+.
T Consensus 4 ~~~~~~~~~~~~g~~~~s~~~~~~~-----~---~~~~~l~~~a~--~G~~~VEl~~~~~---~-~~~~~~-~~~~~~~l 68 (303)
T 3l23_A 4 GVVDEVHAGKEIGLQIYSLSQELYK-----G---DVAANLRKVKD--MGYSKLELAGYGK---G-AIGGVP-MMDFKKMA 68 (303)
T ss_dssp --------CCCCEEEGGGGGGGGGS-----S---CHHHHHHHHHH--TTCCEEEECCEET---T-EETTEE-HHHHHHHH
T ss_pred cchhhhccCCceEEEEEEchhhhcc-----C---CHHHHHHHHHH--cCCCEEEeccccC---c-ccCCCC-HHHHHHHH
Confidence 4556666777888888899985432 1 24455555666 7999999985210 0 011222 33443333
Q ss_pred HhCCCCceeeeecccccccccCCC----------------cchHHHHHHHHHhcCCCEEEEeccCC--h-------HHHH
Q psy15244 728 ELIPNIPFQMILRGNSLVGYSNYS----------------PAEVGAFCRLASQAGIDIFRVFDPLN--S-------VPNL 782 (1427)
Q Consensus 728 ~~~p~~~~qml~Rg~n~vgy~~~~----------------~nvv~~~v~~a~~~Gid~~rif~~~n--d-------~~~~ 782 (1427)
+. .+..+..+.-+. .-.....| .+..+..++.|.+.|++.+++...-. + ++++
T Consensus 69 ~~-~GL~v~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l 146 (303)
T 3l23_A 69 ED-AGLKIISSHVNP-VDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIF 146 (303)
T ss_dssp HH-TTCEEEEEECCC-BCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHH
T ss_pred HH-cCCeEEEEeccc-ccccccCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHH
Confidence 22 223322221111 00000112 12356778889999999998863211 1 3467
Q ss_pred HHHHHHHHHhcC
Q psy15244 783 VKGMDAVQQVTG 794 (1427)
Q Consensus 783 ~~~i~~a~~~G~ 794 (1427)
..+.+.+++.|.
T Consensus 147 ~~l~~~a~~~Gv 158 (303)
T 3l23_A 147 NQASDVIKAEGI 158 (303)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCC
Confidence 788888998888
No 415
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=76.04 E-value=4.7 Score=39.31 Aligned_cols=34 Identities=29% Similarity=0.304 Sum_probs=29.9
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCC
Q psy15244 58 EKILIANRSEVAIRVARACNEMGIKSVGIYSEQD 91 (1427)
Q Consensus 58 kkVLIagrGeia~riiraa~elGi~~vav~s~~d 91 (1427)
++|+|+|.|.++..+++.+.+.|+++++++.+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~ 38 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKD 38 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4899999999999999999999999888866544
No 416
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=75.91 E-value=25 Score=41.85 Aligned_cols=83 Identities=13% Similarity=0.147 Sum_probs=59.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccccC-------------cCC----HHHHHHHHHHHHHHcC-CceEEEeecCCcchH
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKDMAG-------------LLK----PTAAKLLIGSFREKYP-NILIHVHTHDMAGTG 878 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~Dt~G-------------~l~----P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~GlA 878 (1427)
.+.+.+.++++.++++|+|-|.+--|.+ .+. ...+.++|..+++.++ ++||-.=.=-..+
T Consensus 280 ~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~-- 357 (415)
T 3i65_A 280 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG-- 357 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSH--
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCH--
Confidence 5677899999999999999999887753 111 1335678899998875 6887654433333
Q ss_pred HHHHHHHHHhcCCEEEeccccCCC
Q psy15244 879 VATTLACVKAGADIVDVAADSMSG 902 (1427)
Q Consensus 879 ~An~laAi~AGad~VD~av~GmG~ 902 (1427)
..+++++.+|||.|...-.=+.+
T Consensus 358 -eDa~e~l~aGAd~VqIgra~l~~ 380 (415)
T 3i65_A 358 -LDALEKIEAGASVCQLYSCLVFN 380 (415)
T ss_dssp -HHHHHHHHHTEEEEEESHHHHHH
T ss_pred -HHHHHHHHcCCCEEEEcHHHHhc
Confidence 45677788999999877655444
No 417
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=75.86 E-value=9 Score=43.44 Aligned_cols=116 Identities=13% Similarity=0.093 Sum_probs=70.4
Q ss_pred HHHHHHHHHhcCCCEEEEecc-------CC-hHH-----HHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCC--CCCH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDP-------LN-SVP-----NLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKK--KYSL 819 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~-------~n-d~~-----~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~--~~~~ 819 (1427)
..+.++.+++.|.+.|-++.. .. ... .++..-+.+++.|+ .+.. +.+...+.+++.. ....
T Consensus 38 l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL---~i~~-~~~~~~~~~~~~~~~~~~~ 113 (305)
T 3obe_A 38 MPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGL---RISS-SHLTPSLREYTKENMPKFD 113 (305)
T ss_dssp HHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTC---EEEE-EBCCCSCCCCCGGGHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCC---eEEE-eeccccccccchhhHHHHH
Confidence 567899999999999999864 11 111 44555566778898 4432 2222111111110 1235
Q ss_pred HHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHc-----CCceEEEeecCC
Q psy15244 820 NYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKY-----PNILIHVHTHDM 874 (1427)
Q Consensus 820 ~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~-----p~ipi~~H~Hnd 874 (1427)
+++.+.++.+.++|+..|.+.-......+.+...++..|++.. -++.|.+|.|+.
T Consensus 114 ~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 114 EFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 6788888888899999998752222234555555666655432 178999999974
No 418
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=75.76 E-value=34 Score=42.14 Aligned_cols=155 Identities=10% Similarity=0.084 Sum_probs=91.0
Q ss_pred CCcchHHHHHHHHHhcCCCEEEEec-----------cCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCC
Q psy15244 750 YSPAEVGAFCRLASQAGIDIFRVFD-----------PLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYS 818 (1427)
Q Consensus 750 ~~~nvv~~~v~~a~~~Gid~~rif~-----------~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~ 818 (1427)
++.+.....++...+.|++.+-+.. +-++.+.++...+... +. ...+ ++-.-++ .....|.
T Consensus 44 ~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~--~~---~l~~-L~R~~N~--~G~~~yp 115 (539)
T 1rqb_A 44 MAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMP--NS---RLQM-LLRGQNL--LGYRHYN 115 (539)
T ss_dssp CCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCT--TS---CEEE-EECGGGT--TSSSCCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCC--CC---EEEE-Eeccccc--cCcccCc
Confidence 3334455567888889999999954 2335555554443221 21 2222 2211000 0111355
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecC------CcchHHHHHHHHHHhcCCE
Q psy15244 819 LNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHD------MAGTGVATTLACVKAGADI 892 (1427)
Q Consensus 819 ~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hn------d~GlA~An~laAi~AGad~ 892 (1427)
.+-....++.+.++|+++|+|.|.+--. ..+.+.|+.+|+.- ..+.+..-. |....+.-+-++.++||++
T Consensus 116 ddv~~~~ve~a~~aGvd~vrIf~s~sd~--~ni~~~i~~ak~~G--~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~ 191 (539)
T 1rqb_A 116 DEVVDRFVDKSAENGMDVFRVFDAMNDP--RNMAHAMAAVKKAG--KHAQGTICYTISPVHTVEGYVKLAGQLLDMGADS 191 (539)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTT--CEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSE
T ss_pred ccccHHHHHHHHhCCCCEEEEEEehhHH--HHHHHHHHHHHHCC--CeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCE
Confidence 6667778889999999999999876555 67888888888763 444333311 3455566677888999998
Q ss_pred EEeccccCCCCCCCCcHHHHHHHHHh
Q psy15244 893 VDVAADSMSGICSQPAMGTIVSCLEN 918 (1427)
Q Consensus 893 VD~av~GmG~~tgn~~lE~vv~~L~~ 918 (1427)
|.. .-+.|..--....+++..|+.
T Consensus 192 I~L--~DT~G~~~P~~v~~lv~~l~~ 215 (539)
T 1rqb_A 192 IAL--KDMAALLKPQPAYDIIKAIKD 215 (539)
T ss_dssp EEE--EETTCCCCHHHHHHHHHHHHH
T ss_pred EEe--CCCCCCcCHHHHHHHHHHHHH
Confidence 743 333332222234556666653
No 419
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=75.73 E-value=7.6 Score=42.65 Aligned_cols=74 Identities=20% Similarity=0.184 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHCCCCEEEEccccCcCC-HHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccc
Q psy15244 821 YYEDLAKQLVESGAQVLCLKDMAGLLK-PTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAAD 898 (1427)
Q Consensus 821 ~~~~~a~~l~~~Gad~i~i~Dt~G~l~-P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~ 898 (1427)
...++++.+.++|++.|.+.|+.+... .....++++.+++.+ ++||.+|.--.. ...+..++++|||.|.....
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~-~ipvi~~ggI~~---~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQI-DIPFTVGGGIHD---FETASELILRGADKVSINTA 105 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTC-CSCEEEESSCCS---HHHHHHHHHTTCSEEEESHH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhC-CCCEEEeCCCCC---HHHHHHHHHcCCCEEEEChH
Confidence 356788999999999999999876532 233456788888876 899998865543 34567778899999865443
No 420
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=75.53 E-value=34 Score=39.54 Aligned_cols=119 Identities=18% Similarity=0.248 Sum_probs=76.9
Q ss_pred ChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCC-------CCCCC----------CCC-------HHHHHHHHHHHHHC
Q psy15244 777 NSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLT-------NPNKK----------KYS-------LNYYEDLAKQLVES 832 (1427)
Q Consensus 777 nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~-------~p~~~----------~~~-------~~~~~~~a~~l~~~ 832 (1427)
..++.+++.++.+++.|. .+-.-|...|-.. +|.+- ..+ .+.|.+.|+.+.++
T Consensus 80 ~~i~~~~~~~~~vh~~G~---~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~a 156 (340)
T 3gr7_A 80 DHIAGLRELVGLVKEHGA---AIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEA 156 (340)
T ss_dssp THHHHHHHHHHHHHHTTC---EEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCC---eEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 356678888888888887 5555555544211 11110 012 45677777888889
Q ss_pred CCCEEEEc-------------------cccCcC---CHHHHHHHHHHHHHHcCCceEEEeecC--------CcchHHHHH
Q psy15244 833 GAQVLCLK-------------------DMAGLL---KPTAAKLLIGSFREKYPNILIHVHTHD--------MAGTGVATT 882 (1427)
Q Consensus 833 Gad~i~i~-------------------Dt~G~l---~P~~~~~lv~~lr~~~p~ipi~~H~Hn--------d~GlA~An~ 882 (1427)
|.|.|-|- |-.|.. .+.-+.++|+++|+.+ +.||.+-..- +.-..+.-+
T Consensus 157 GfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~~g~~~~~~~~la 235 (340)
T 3gr7_A 157 GFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHPDGLTAKDYVPYA 235 (340)
T ss_dssp TCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCSTTSCCGGGHHHHH
T ss_pred CCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccCCCCCHHHHHHHH
Confidence 99987763 444532 2345788999999998 8888775552 233344445
Q ss_pred HHHHHhcCCEEEecccc
Q psy15244 883 LACVKAGADIVDVAADS 899 (1427)
Q Consensus 883 laAi~AGad~VD~av~G 899 (1427)
-...++|+|.|+++..+
T Consensus 236 ~~L~~~Gvd~i~vs~g~ 252 (340)
T 3gr7_A 236 KRMKEQGVDLVDVSSGA 252 (340)
T ss_dssp HHHHHTTCCEEEEECCC
T ss_pred HHHHHcCCCEEEEecCC
Confidence 55667999999998643
No 421
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=75.25 E-value=4.9 Score=46.97 Aligned_cols=116 Identities=15% Similarity=0.114 Sum_probs=73.8
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEeC
Q psy15244 58 EKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHPG 137 (1427)
Q Consensus 58 kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~pg 137 (1427)
+||||+|.|.++..+++.+.+ .+.+.+++.+..........+ ..+.+ +..|.+.+.+++++ +|+|+-.
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~-~~~~~--------d~~d~~~l~~~~~~--~DvVi~~ 84 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFA-TPLKV--------DASNFDKLVEVMKE--FELVIGA 84 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTS-EEEEC--------CTTCHHHHHHHHTT--CSEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccC-CcEEE--------ecCCHHHHHHHHhC--CCEEEEe
Confidence 379999999999999999976 467665544332211111122 12222 23567888888775 7889887
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHhCCCCCCCCc
Q psy15244 138 YGFLSEREDFAKAVIGAGLEFIGPAPNVLKTLGDKVLARDAALKADVPIIPGT 190 (1427)
Q Consensus 138 ~gflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~a~~aGVpvp~~~ 190 (1427)
.+.. -+..++++|.+.|..++-.+... ..-..+.+.++++|+...++.
T Consensus 85 ~p~~-~~~~v~~~~~~~g~~yvD~s~~~----~~~~~l~~~a~~~g~~~i~~~ 132 (365)
T 3abi_A 85 LPGF-LGFKSIKAAIKSKVDMVDVSFMP----ENPLELRDEAEKAQVTIVFDA 132 (365)
T ss_dssp CCGG-GHHHHHHHHHHHTCEEEECCCCS----SCGGGGHHHHHHTTCEEECCC
T ss_pred cCCc-ccchHHHHHHhcCcceEeeeccc----hhhhhhhhhhccCCceeeecC
Confidence 6543 35678999999999887443211 111234566788888777654
No 422
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=75.25 E-value=2.5 Score=51.17 Aligned_cols=68 Identities=21% Similarity=0.385 Sum_probs=45.6
Q ss_pred CCCCCCccccCCCHHHHHHHHHhcCCcEEEeecCCCCCcCeEEe--cCHHHHHHHHHHHHHHHHHccCCCcEEEEeecc
Q psy15244 184 VPIIPGTTEPVTDVDKVKEFCDEVEFPVILKAAFGGGGRGMRMV--ANKDAIEENFKRAQSEALASFGKDDMLVEKYID 260 (1427)
Q Consensus 184 Vpvp~~~~~~v~s~eea~~~a~~iGyPvVVKP~~GgGGrGV~iV--~s~eeL~~a~~~a~~ea~~~fg~~~vlVEeyIe 260 (1427)
++.+|++ .+.+.++...+.++.. -+||||+.|.||.||.+- .+.++.++..+++... ...+++|++++
T Consensus 341 l~~VpT~--~c~~~~~~~~vl~~l~-~lViKp~~g~gg~gv~iG~~~s~~e~~~~~~~i~~~------p~~yIaQe~v~ 410 (474)
T 3n6x_A 341 LSNVPTY--QLSKADDLKYVLDNLA-ELVVKEVQGSGGYGMLVGPAASKQELEDFRQRILAN------PANYIAQPTLA 410 (474)
T ss_dssp SEECCCE--ETTSHHHHHHHHHSGG-GEEEEECCCE-----EEGGGCCHHHHHHHHHHHHHS------GGGEEEEECCC
T ss_pred ccCCCce--ecCCHHHHHHHHhchh-heEEEecCCCCCCceEECCcCCHHHHHHHHHHHHhC------CCCEEEeeccC
Confidence 3444444 4677888777776665 799999999999999884 5677877777666442 24599999998
No 423
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=75.21 E-value=7.4 Score=44.33 Aligned_cols=105 Identities=30% Similarity=0.360 Sum_probs=70.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEE---------ccccCcC--CHH-HHHHHHHHHHHHcCCceEE---------E
Q psy15244 811 NPNKKKYSLNYYEDLAKQLVESGAQVLCL---------KDMAGLL--KPT-AAKLLIGSFREKYPNILIH---------V 869 (1427)
Q Consensus 811 ~p~~~~~~~~~~~~~a~~l~~~Gad~i~i---------~Dt~G~l--~P~-~~~~lv~~lr~~~p~ipi~---------~ 869 (1427)
-|.-.+++.+.+++.++++.+.|+..|.| ||..|.. .|. -+.+-|+++|+++|++-|- -
T Consensus 60 MPGv~r~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~VitDvcLc~YT~ 139 (342)
T 1h7n_A 60 LPNINRIGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTS 139 (342)
T ss_dssp STTCEEECHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBT
T ss_pred CCCceeeCHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccC
Confidence 35556899999999999999999986654 4444533 443 2667799999999986542 2
Q ss_pred eecCC----cch---------HHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCC
Q psy15244 870 HTHDM----AGT---------GVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDK 921 (1427)
Q Consensus 870 H~Hnd----~Gl---------A~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~ 921 (1427)
|.||- .|. =.-.++.-.+||||+|-- ++|=- | -...+=.+|...|+
T Consensus 140 HGHcGil~~~g~V~ND~Tl~~Lak~Als~A~AGAdiVAP--SdMMD--G--rV~aIR~aLd~~G~ 198 (342)
T 1h7n_A 140 HGHCGVLYDDGTINRERSVSRLAAVAVNYAKAGAHCVAP--SDMID--G--RIRDIKRGLINANL 198 (342)
T ss_dssp TCCSSCBCTTSSBCHHHHHHHHHHHHHHHHHHTCSEEEE--CCCCT--T--HHHHHHHHHHHTTC
T ss_pred CCceeEECCCCcCccHHHHHHHHHHHHHHHHcCCCeeec--ccccc--c--HHHHHHHHHHHCCC
Confidence 88863 241 112366778999999943 33321 1 23456667777776
No 424
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=75.06 E-value=34 Score=39.33 Aligned_cols=77 Identities=16% Similarity=0.089 Sum_probs=53.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEcccc---------------C-cCC---HHHHHHHHHHHHHHcC-CceEEEeecCCcc
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKDMA---------------G-LLK---PTAAKLLIGSFREKYP-NILIHVHTHDMAG 876 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~Dt~---------------G-~l~---P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~G 876 (1427)
.+.+.+.++++.++++|+|.|.+..+. | +.- .....++++.+++.++ ++||-.=.--..+
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~ 301 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSV 301 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 567788999999999999999987653 1 111 1133467888888875 7888665544444
Q ss_pred hHHHHHHHHHHhcCCEEEec
Q psy15244 877 TGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 877 lA~An~laAi~AGad~VD~a 896 (1427)
. .+.+++++|||.|-.+
T Consensus 302 ~---da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 302 I---AAREKIAAGASLVQIY 318 (336)
T ss_dssp H---HHHHHHHHTCSEEEES
T ss_pred H---HHHHHHHCCCCEEEee
Confidence 3 4456666899999654
No 425
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=74.98 E-value=66 Score=36.46 Aligned_cols=193 Identities=10% Similarity=-0.015 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChH------HHHHHHHHhCCCCcee---eee-cccccccccC
Q psy15244 680 TYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPW------ERLAELRELIPNIPFQ---MIL-RGNSLVGYSN 749 (1427)
Q Consensus 680 t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~------erl~~lr~~~p~~~~q---ml~-Rg~n~vgy~~ 749 (1427)
...+...++.+.+ .|++.||++.. ....+ +.++.+++.+....+. ... -+...-..-.
T Consensus 30 ~~~~~~~l~~~~~--~G~~~vEl~~~----------~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~~~~~~~~~l~ 97 (335)
T 2qw5_A 30 RRIVVAHIKKLQR--FGYSGFEFPIA----------PGLPENYAQDLENYTNLRHYLDSEGLENVKISTNVGATRTFDPS 97 (335)
T ss_dssp HHHHHHHHHHHHH--TTCCEEEEECC----------CCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEECCCCSSSCTT
T ss_pred cchHHHHHHHHHH--hCCCEEEEecC----------CCcccccccchHHHHHHHHHHHHCCCCcceeEEEeccCCCCCCC
Q ss_pred CCc--------chHHHHHHHHHhcCCCEEEE--------eccCCh--------------------HHHHHHHHHHHHHhc
Q psy15244 750 YSP--------AEVGAFCRLASQAGIDIFRV--------FDPLNS--------------------VPNLVKGMDAVQQVT 793 (1427)
Q Consensus 750 ~~~--------nvv~~~v~~a~~~Gid~~ri--------f~~~nd--------------------~~~~~~~i~~a~~~G 793 (1427)
.++ +..+..++.|.+.|++.+.. +....+ .+.+....+.+++.|
T Consensus 98 ~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~G 177 (335)
T 2qw5_A 98 SNYPEQRQEALEYLKSRVDITAALGGEIMMGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKK 177 (335)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCEEeccccCccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcC
Q ss_pred CCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEc-cc----cCcCCHHHHHHHHHHHH--HHcCCce
Q psy15244 794 GGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLK-DM----AGLLKPTAAKLLIGSFR--EKYPNIL 866 (1427)
Q Consensus 794 ~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~-Dt----~G~l~P~~~~~lv~~lr--~~~p~ip 866 (1427)
. .+++- ..+.-...-.....++.+.+.+.+.+.+.++ || .+-..|....+.++.+. ..+
T Consensus 178 v-------~l~lE---~~~~~~~~~~~t~~~~~~ll~~v~~~~vgl~~D~~H~~~~g~d~~~~~~~l~~~~~~~ri---- 243 (335)
T 2qw5_A 178 V-------KLAIE---PITHWETPGPNKLSQLIEFLKGVKSKQVGVVIDSAHEILDGEGPEIFKTQVEYLAQQGRL---- 243 (335)
T ss_dssp C-------EEEEC---CCCTTTCSSCCSHHHHHHHHTTCCCTTEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHTCE----
T ss_pred C-------EEEEe---eCCcccccccCCHHHHHHHHHhcCCCCeeEEEecccchhccCChHHHHHHHHHhCCcCCE----
Q ss_pred EEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCC
Q psy15244 867 IHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKR 922 (1427)
Q Consensus 867 i~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~ 922 (1427)
.++|.+|.. -..+|. |..+...++.+|+. |++
T Consensus 244 ~~vHlkD~~---------------------~~~~G~--G~id~~~i~~~L~~-gy~ 275 (335)
T 2qw5_A 244 HYVQVSPPD---------------------RGALHT--SWLPWKSFLTPIVK-VYD 275 (335)
T ss_dssp EEEEECCTT---------------------SSCSSS--SCCCHHHHHHHHHH-HCC
T ss_pred EEEEECCCC---------------------CCCCCC--CCcCHHHHHHHHHc-cCC
No 426
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=74.98 E-value=27 Score=39.78 Aligned_cols=123 Identities=16% Similarity=0.145 Sum_probs=80.9
Q ss_pred HHHHHhcCCCEEEEec-cCC-----------hHHHHHHHHHHHHH-hcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHH
Q psy15244 759 CRLASQAGIDIFRVFD-PLN-----------SVPNLVKGMDAVQQ-VTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDL 825 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~-~~n-----------d~~~~~~~i~~a~~-~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~ 825 (1427)
.+.+.++|+|.+-+.+ +++ .++.|...++.+.. ... - +..-.|++ + -+++...+.
T Consensus 42 A~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~---p----viaD~d~G--y---g~~~~v~~~ 109 (305)
T 3ih1_A 42 ALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDL---P----VLVDIDTG--F---GGVLNVART 109 (305)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCC---C----EEEECTTC--S---SSHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCC---C----EEEECCCC--C---CCHHHHHHH
Confidence 4555678999999887 444 23455544444433 233 1 11122222 1 356778889
Q ss_pred HHHHHHCCCCEEEEccccC-----------cCCHHHHHHHHHHHHHHcCCceEEEeecCC----cchHHHHHHHHHHhcC
Q psy15244 826 AKQLVESGAQVLCLKDMAG-----------LLKPTAAKLLIGSFREKYPNILIHVHTHDM----AGTGVATTLACVKAGA 890 (1427)
Q Consensus 826 a~~l~~~Gad~i~i~Dt~G-----------~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd----~GlA~An~laAi~AGa 890 (1427)
++.+.++||..|.|=|..+ +....++.+.|+++++.-++.-|---+-.- .--++.-+.+..+|||
T Consensus 110 v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGA 189 (305)
T 3ih1_A 110 AVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVKAGA 189 (305)
T ss_dssp HHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHHcCC
Confidence 9999999999999999863 444567888888888885455554444322 3357778888899999
Q ss_pred CEE
Q psy15244 891 DIV 893 (1427)
Q Consensus 891 d~V 893 (1427)
|.|
T Consensus 190 D~i 192 (305)
T 3ih1_A 190 DAI 192 (305)
T ss_dssp SEE
T ss_pred CEE
Confidence 988
No 427
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=74.90 E-value=11 Score=43.18 Aligned_cols=101 Identities=13% Similarity=0.139 Sum_probs=80.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccCc---CCHHHHHHHHHHHHHHc-CCceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAGL---LKPTAAKLLIGSFREKY-PNILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~---l~P~~~~~lv~~lr~~~-p~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++=|+|= |+.++-.++++...+.. ..+||-.|+ +|+.--++..+..|.++|
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 109 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVG 109 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999995 88899999999999886 368988876 678888899999999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..--.- . ..++-+.++..++
T Consensus 110 adavlv~~P~y~-~-~~~s~~~l~~~f~ 135 (307)
T 3s5o_A 110 ADAAMVVTPCYY-R-GRMSSAALIHHYT 135 (307)
T ss_dssp CSEEEEECCCTT-G-GGCCHHHHHHHHH
T ss_pred CCEEEEcCCCcC-C-CCCCHHHHHHHHH
Confidence 999866433321 1 1145566666665
No 428
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=74.85 E-value=35 Score=40.15 Aligned_cols=165 Identities=11% Similarity=0.089 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhC-CCCceeeeecccccccccCCCcchHHH
Q psy15244 679 RTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELI-PNIPFQMILRGNSLVGYSNYSPAEVGA 757 (1427)
Q Consensus 679 ~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~-p~~~~qml~Rg~n~vgy~~~~~nvv~~ 757 (1427)
+.+++.+-|....+ .|+..+++..|. +. -+...++++.+|+.+ |+.++.+ .+. -||+ +++ ..+
T Consensus 149 ~~~~~~~~a~~~~~--~Gf~~vKik~g~--~~-----~~~~~e~v~avR~a~G~d~~l~v--Dan--~~~~--~~~-a~~ 212 (391)
T 2qgy_A 149 DTNDYLRQIEKFYG--KKYGGIKIYPML--DS-----LSISIQFVEKVREIVGDELPLML--DLA--VPED--LDQ-TKS 212 (391)
T ss_dssp CHHHHHHHHHHHHH--TTCSCEEECCCC--SS-----HHHHHHHHHHHHHHHCSSSCEEE--ECC--CCSC--HHH-HHH
T ss_pred CHHHHHHHHHHHHH--cCCCEEEEccCC--Ch-----HHHHHHHHHHHHHHhCCCCEEEE--EcC--CCCC--HHH-HHH
Confidence 45777777776665 699999986541 10 133568899999977 6676654 332 1343 233 445
Q ss_pred HHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCC-CCE
Q psy15244 758 FCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESG-AQV 836 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~G-ad~ 836 (1427)
+++...+.|++.+.--.+-.+++.++..-+ ..+. -|+-. + +-++.+. ++++.+.| +|.
T Consensus 213 ~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~---~~~i-------PIa~d-----E--~~~~~~~----~~~~i~~~~~d~ 271 (391)
T 2qgy_A 213 FLKEVSSFNPYWIEEPVDGENISLLTEIKN---TFNM-------KVVTG-----E--KQSGLVH----FRELISRNAADI 271 (391)
T ss_dssp HHHHHGGGCCSEEECSSCTTCHHHHHHHHH---HCSS-------CEEEC-----T--TCCSHHH----HHHHHHTTCCSE
T ss_pred HHHHHHhcCCCeEeCCCChhhHHHHHHHHh---hCCC-------CEEEc-----C--CcCCHHH----HHHHHHcCCCCE
Confidence 677777889998764434446655544322 2333 22322 2 2355544 34444455 788
Q ss_pred EEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHH
Q psy15244 837 LCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTL 883 (1427)
Q Consensus 837 i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~l 883 (1427)
|.++ ..=+.-+.++.++....+ .. ++++..|+-.+++.+++.++
T Consensus 272 v~ik-~~~~GGit~~~~i~~~A~-~~-gi~~~~~~~~~~~i~~aa~~ 315 (391)
T 2qgy_A 272 FNPD-ISGMGGLIDIIEISNEAS-NN-GIFISPHCWNSMSVSASAML 315 (391)
T ss_dssp ECCB-TTTSSCHHHHHHHHHHHH-HT-TCEECCBCCSCTTHHHHHHH
T ss_pred EEEC-cchhCCHHHHHHHHHHHH-HC-CCEEeccCCCCcHHHHHHHH
Confidence 8775 333334556666655554 44 79999998743377765443
No 429
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=74.51 E-value=39 Score=39.46 Aligned_cols=115 Identities=20% Similarity=0.220 Sum_probs=68.1
Q ss_pred HHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCC
Q psy15244 756 GAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGA 834 (1427)
Q Consensus 756 ~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Ga 834 (1427)
.+.++.+.++|+|.+.|-.+..+.+.+...++.+++. +. .+-+.-+ .+. +.++.+.++||
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~---~Vivg~v------------~t~----e~A~~l~~aGa 167 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNI---DVIVGNV------------VTE----EATKELIENGA 167 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCC---EEEEEEE------------CSH----HHHHHHHHTTC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCC---cEEEccC------------CCH----HHHHHHHHcCc
Confidence 5678999999999998755544445555667777665 55 3332111 222 45788999999
Q ss_pred CEEEEc------cc----cCcCCH--HHHHHHHHHHHHHcCCceEEEeecCCcchH-HHHHHHHHHhcCCEEEe
Q psy15244 835 QVLCLK------DM----AGLLKP--TAAKLLIGSFREKYPNILIHVHTHDMAGTG-VATTLACVKAGADIVDV 895 (1427)
Q Consensus 835 d~i~i~------Dt----~G~l~P--~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA-~An~laAi~AGad~VD~ 895 (1427)
|.|.+. .+ .|...| ..+.++.. +.+.. ++||-.= -|.. ..++.+|+.+||+.|-.
T Consensus 168 D~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~-~~~~~-~iPVIA~----GGI~~~~di~kala~GAd~V~v 235 (361)
T 3khj_A 168 DGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSS-VASKF-GIPIIAD----GGIRYSGDIGKALAVGASSVMI 235 (361)
T ss_dssp SEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHH-HHHHH-TCCEEEE----SCCCSHHHHHHHHHHTCSEEEE
T ss_pred CEEEEecCCCcCCCcccccCCCCCcHHHHHHHHH-HHhhc-CCeEEEE----CCCCCHHHHHHHHHcCCCEEEE
Confidence 999882 11 122233 22333222 23333 6776542 2332 35667788899998754
No 430
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=74.43 E-value=5.7 Score=44.05 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCC
Q psy15244 56 TMEKILIANRSEVAIRVARACNEMGIKSVGIYSEQD 91 (1427)
Q Consensus 56 ~~kkVLIagrGeia~riiraa~elGi~~vav~s~~d 91 (1427)
|++||||.|.|.++..+++.+.+.|++++++...+.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 568999999999999999999999999998876543
No 431
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=74.16 E-value=31 Score=37.58 Aligned_cols=212 Identities=11% Similarity=0.058 Sum_probs=112.1
Q ss_pred CeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCCchhhhh--hc-cccChHHHHHHHHHhCCCC-
Q psy15244 658 HILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCL--KF-LKECPWERLAELRELIPNI- 733 (1427)
Q Consensus 658 ~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~--rf-l~e~p~erl~~lr~~~p~~- 733 (1427)
++-+.--|+|+ + +....++.+.+ .|++.||+|........+ .+ .....-+.++++++.+...
T Consensus 11 klg~~~~~~~~---------~---~~~~~l~~~~~--~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 76 (262)
T 3p6l_A 11 RLGMQSYSFHL---------F---PLTEALDKTQE--LGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKG 76 (262)
T ss_dssp EEEEEGGGGTT---------S---CHHHHHHHHHH--TTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTT
T ss_pred EEEEEecccCC---------C---CHHHHHHHHHH--cCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcC
Confidence 35555566664 1 24455556666 799999998532100000 00 1111123344455444333
Q ss_pred -ceeeeecccccccccCCCcchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCC
Q psy15244 734 -PFQMILRGNSLVGYSNYSPAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNP 812 (1427)
Q Consensus 734 -~~qml~Rg~n~vgy~~~~~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p 812 (1427)
.+..+.-. + +...+..+..++.|.+.|++.+++... .+.++...+.+++.|. .+ ++-- .+
T Consensus 77 l~i~~~~~~-----~-~~~~~~~~~~i~~A~~lGa~~v~~~~~---~~~~~~l~~~a~~~gv---~l----~~En---~~ 137 (262)
T 3p6l_A 77 IKIVGTGVY-----V-AEKSSDWEKMFKFAKAMDLEFITCEPA---LSDWDLVEKLSKQYNI---KI----SVHN---HP 137 (262)
T ss_dssp CEEEEEEEE-----C-CSSTTHHHHHHHHHHHTTCSEEEECCC---GGGHHHHHHHHHHHTC---EE----EEEC---CS
T ss_pred CeEEEEecc-----C-CccHHHHHHHHHHHHHcCCCEEEecCC---HHHHHHHHHHHHHhCC---EE----EEEe---CC
Confidence 33222211 1 123445788999999999999999743 3566778888999998 32 2221 12
Q ss_pred CCCC-CCHHHHHHHHHHHHHCCCCEE-EEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcC
Q psy15244 813 NKKK-YSLNYYEDLAKQLVESGAQVL-CLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGA 890 (1427)
Q Consensus 813 ~~~~-~~~~~~~~~a~~l~~~Gad~i-~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGa 890 (1427)
..+. .+.+.+.++++. +...+ ..-|+.=...- -.+....+++. .+--.++|.+|...-. .|.
T Consensus 138 ~~~~~~~~~~~~~ll~~----~~~~~g~~~D~~h~~~~--g~d~~~~l~~~-~~~i~~vH~~D~~~~~---------~~~ 201 (262)
T 3p6l_A 138 QPSDYWKPENLLKAISG----RSQSLGSCSDVGHWRRE--GLNQIDCLKQL-KGRIISLHFKDIAPKK---------AGE 201 (262)
T ss_dssp SSSSSSSHHHHHHHHTT----SCTTEEEEEEHHHHHHT--TCCHHHHHHHT-TTCEEEEEECEECCCC---------TTC
T ss_pred CccccCCHHHHHHHHHh----CCCceEEEechHHHHhc--CCCHHHHHHHH-hhhheEEeeccCCccc---------cCc
Confidence 2112 367777777652 33323 33365432210 01223344433 3555689999976110 011
Q ss_pred CEEEeccccCCCCCCCCcHHHHHHHHHhCCCC
Q psy15244 891 DIVDVAADSMSGICSQPAMGTIVSCLENTDKR 922 (1427)
Q Consensus 891 d~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~ 922 (1427)
..- .-..+| .|..+...++.+|+..|++
T Consensus 202 ~~~--~~~~~G--~G~id~~~~~~~l~~~gy~ 229 (262)
T 3p6l_A 202 NEQ--HDVIWG--TGILDVKGMLKELKSQNFK 229 (262)
T ss_dssp SCC--CEECTT--SSSSCHHHHHHHHHHTTCC
T ss_pred Ccc--ccCCCC--CCccCHHHHHHHHHHCCCC
Confidence 110 112233 5788999999999988765
No 432
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=74.10 E-value=10 Score=43.35 Aligned_cols=102 Identities=15% Similarity=0.197 Sum_probs=81.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHc-CCceEEEe-ecCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKY-PNILIHVH-THDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~-p~ipi~~H-~Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++=|+| .|++++=.++++...+.. +.+||-.| .+|+.--++..+..|.++|
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G 103 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLG 103 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcC
Confidence 368999999999999999999999999999 578888889999888875 46899888 4788889999999999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+.. +.=.....|+-+.++..++
T Consensus 104 adavlv~~-Pyy~~~~~~s~~~l~~~f~ 130 (309)
T 3fkr_A 104 AAMVMAMP-PYHGATFRVPEAQIFEFYA 130 (309)
T ss_dssp CSEEEECC-SCBTTTBCCCHHHHHHHHH
T ss_pred CCEEEEcC-CCCccCCCCCHHHHHHHHH
Confidence 99987654 4321012345666666654
No 433
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=74.06 E-value=10 Score=45.47 Aligned_cols=91 Identities=11% Similarity=0.150 Sum_probs=63.4
Q ss_pred EEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEc-ccc--C---cCCHHHHHHH---HHHHHH---HcC-C
Q psy15244 798 IVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLK-DMA--G---LLKPTAAKLL---IGSFRE---KYP-N 864 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~-Dt~--G---~l~P~~~~~l---v~~lr~---~~p-~ 864 (1427)
.+.+.+..|-|=+ -|.+ .+.+..++.++++.+.|||+|-|. .++ | +-..+++.++ |++|++ +++ +
T Consensus 192 ~vMGIlNvTPDSF-sDgg-~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~ 269 (442)
T 3mcm_A 192 IRMGIVNLSNQSF-SDGN-FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYK 269 (442)
T ss_dssp EEEEEEECSSCC--CCCS-SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSC
T ss_pred eEEEEEeCCCCCC-CCCC-CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCC
Confidence 6777778776522 2445 889999999999999999999886 111 1 1122455554 777777 343 8
Q ss_pred ceEEEeecCCcchHHHHHHHHHH--hcCCE-EEe
Q psy15244 865 ILIHVHTHDMAGTGVATTLACVK--AGADI-VDV 895 (1427)
Q Consensus 865 ipi~~H~Hnd~GlA~An~laAi~--AGad~-VD~ 895 (1427)
+||.+-+=+ ...+.+|++ +||++ |+-
T Consensus 270 vpISIDT~~-----~~VaeaAL~~~aGa~i~IND 298 (442)
T 3mcm_A 270 PLVSIDTRK-----LEVMQKILAKHHDIIWMIND 298 (442)
T ss_dssp CEEEEECCC-----HHHHHHHHHHHGGGCCEEEE
T ss_pred CeEEEeCCC-----HHHHHHHHhhCCCCCEEEEc
Confidence 999997655 455678888 99999 864
No 434
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=74.01 E-value=23 Score=40.63 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=79.6
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHc-CCceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKY-PNILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~-p~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+| .|+.++-.++++...+.. +.+||-.|+ +|+.--++..+..|.++|
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~G 117 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAG 117 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 469999999999999999999999999998 467888888998888875 368887776 678888888999999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..--. . .|+-+.++..++
T Consensus 118 adavlv~~P~y-~---~~~~~~l~~~f~ 141 (315)
T 3si9_A 118 ADAVLVVTPYY-N---RPNQRGLYTHFS 141 (315)
T ss_dssp CSEEEEECCCS-S---CCCHHHHHHHHH
T ss_pred CCEEEECCCCC-C---CCCHHHHHHHHH
Confidence 99986654332 2 245566666665
No 435
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=73.90 E-value=12 Score=43.30 Aligned_cols=116 Identities=19% Similarity=0.200 Sum_probs=75.2
Q ss_pred HHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCC
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGA 834 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Ga 834 (1427)
....++.+.+.|+|.+.+-.... ...++.+++.|. .+-..+ .+. +.++.+.++|+
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~p-----~~~i~~l~~~g~---~v~~~v-------------~~~----~~a~~~~~~Ga 131 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGNP-----SKYMERFHEAGI---IVIPVV-------------PSV----ALAKRMEKIGA 131 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCG-----GGTHHHHHHTTC---EEEEEE-------------SSH----HHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCCEEEECCCCh-----HHHHHHHHHcCC---eEEEEe-------------CCH----HHHHHHHHcCC
Confidence 45678899999999998866432 234566667776 433221 222 35677888999
Q ss_pred CEEEEcc--ccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchH-HHHHHHHHHhcCCEEEeccccC
Q psy15244 835 QVLCLKD--MAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTG-VATTLACVKAGADIVDVAADSM 900 (1427)
Q Consensus 835 d~i~i~D--t~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA-~An~laAi~AGad~VD~av~Gm 900 (1427)
|.|.+-. +.|..-......+++.+++.+ ++||-.=. |.. ..++.+++.+|||.|...-.=+
T Consensus 132 D~i~v~g~~~GG~~g~~~~~~ll~~i~~~~-~iPViaaG----GI~~~~~~~~al~~GAdgV~vGs~~l 195 (332)
T 2z6i_A 132 DAVIAEGMEAGGHIGKLTTMTLVRQVATAI-SIPVIAAG----GIADGEGAAAGFMLGAEAVQVGTRFV 195 (332)
T ss_dssp SCEEEECTTSSEECCSSCHHHHHHHHHHHC-SSCEEEES----SCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CEEEEECCCCCCCCCCccHHHHHHHHHHhc-CCCEEEEC----CCCCHHHHHHHHHcCCCEEEecHHHh
Confidence 9988832 222211112347888898887 78876643 444 4677788889999998764433
No 436
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=73.87 E-value=37 Score=37.23 Aligned_cols=141 Identities=16% Similarity=0.068 Sum_probs=87.5
Q ss_pred chHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15244 753 AEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVE 831 (1427)
Q Consensus 753 nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~ 831 (1427)
.-+++.+++|.+.|++.+-+.- +++ .+.+..+.. +. .+...+ +.|.. ..+.+..+.-++++.+
T Consensus 36 ~~i~~l~~~a~~~~~~aVcv~p--~~v----~a~~~l~~~~~v---~v~tvi------gFP~G-~~~~~~k~~e~~~Av~ 99 (234)
T 1n7k_A 36 EDVRNLVREASDYGFRCAVLTP--VYT----VKISGLAEKLGV---KLCSVI------GFPLG-QAPLEVKLVEAQTVLE 99 (234)
T ss_dssp HHHHHHHHHHHHHTCSEEEECH--HHH----HHHHHHHHHHTC---CEEEEE------STTTC-CSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEch--HHh----eeehHhCCCCCc---eEEEEe------CCCCC-CCcHHHHHHHHHHHHH
Confidence 3367789999999998876543 233 233333344 44 333322 23432 3667777778899999
Q ss_pred CCCCEEEEccccCcCCHHHHHHHHHHHHHHcC--CceE----EEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCC-
Q psy15244 832 SGAQVLCLKDMAGLLKPTAAKLLIGSFREKYP--NILI----HVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGIC- 904 (1427)
Q Consensus 832 ~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p--~ipi----~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~t- 904 (1427)
.|||.|-+.=-.|.++- .+.+-+.++++... ++|+ +....++ -.=.-.+..|+++|||+|-++. |++ +
T Consensus 100 ~GAdEID~vinig~~~~-~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~-e~i~~a~ria~eaGADfVKTsT-G~~--~~ 174 (234)
T 1n7k_A 100 AGATELDVVPHLSLGPE-AVYREVSGIVKLAKSYGAVVKVILEAPLWDD-KTLSLLVDSSRRAGADIVKTST-GVY--TK 174 (234)
T ss_dssp HTCCEEEECCCGGGCHH-HHHHHHHHHHHHHHHTTCEEEEECCGGGSCH-HHHHHHHHHHHHTTCSEEESCC-SSS--CC
T ss_pred cCCCEEEEeccchHHHH-HHHHHHHHHHHHHhhcCCeEEEEEeccCCCH-HHHHHHHHHHHHhCCCEEEeCC-CCC--CC
Confidence 99999988666777766 77777888887642 3553 2222222 2222345678899999999985 222 2
Q ss_pred CCCcHHHHHH
Q psy15244 905 SQPAMGTIVS 914 (1427)
Q Consensus 905 gn~~lE~vv~ 914 (1427)
+.+..|++-.
T Consensus 175 ~gAt~~dv~l 184 (234)
T 1n7k_A 175 GGDPVTVFRL 184 (234)
T ss_dssp CCSHHHHHHH
T ss_pred CCCCHHHHHH
Confidence 4566666544
No 437
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=73.77 E-value=7.8 Score=41.16 Aligned_cols=68 Identities=19% Similarity=0.215 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcC-CceEEEeecCCcchHHHHHHHHHHhcCCEE
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYP-NILIHVHTHDMAGTGVATTLACVKAGADIV 893 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~GlA~An~laAi~AGad~V 893 (1427)
.+.+.+.++++.+.+.|++.|.+.= ..| ...+.++.+|+.+| ++.|+..+..| ...+..|+++|||+|
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~----~~~-~~~~~i~~ir~~~~~~~~ig~~~v~~----~~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITF----TVP-DADTVIKELSFLKEKGAIIGAGTVTS----VEQCRKAVESGAEFI 87 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEET----TST-THHHHHHHTHHHHHTTCEEEEESCCS----HHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeC----CCh-hHHHHHHHHHHHCCCCcEEEecccCC----HHHHHHHHHcCCCEE
Confidence 6788999999999999999997742 234 34567888998876 78888866333 235688999999999
No 438
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=73.63 E-value=12 Score=39.57 Aligned_cols=71 Identities=13% Similarity=-0.007 Sum_probs=48.9
Q ss_pred EEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCC-HHHHHHHHHhcCCCEEEe
Q psy15244 59 KILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLN-IPEIICIAKNNNVDAIHP 136 (1427)
Q Consensus 59 kVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yld-i~~Ii~ia~~~~vDaI~p 136 (1427)
||||.| .|.++..+++.+.+.|++++++...++..... ..-.+.. .+..| .+.+.++.+ ++|+|+-
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~-------~D~~d~~~~~~~~~~--~~d~vi~ 69 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVH-------FDVDWTPEEMAKQLH--GMDAIIN 69 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEE-------CCTTSCHHHHHTTTT--TCSEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEE-------ecccCCHHHHHHHHc--CCCEEEE
Confidence 899999 89999999999999999999887655432211 1112221 12455 667766665 5999987
Q ss_pred CCCcc
Q psy15244 137 GYGFL 141 (1427)
Q Consensus 137 g~gfl 141 (1427)
..|..
T Consensus 70 ~ag~~ 74 (219)
T 3dqp_A 70 VSGSG 74 (219)
T ss_dssp CCCCT
T ss_pred CCcCC
Confidence 76644
No 439
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=73.56 E-value=9.1 Score=46.32 Aligned_cols=85 Identities=9% Similarity=0.116 Sum_probs=57.9
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEe
Q psy15244 57 MEKILIANRSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHP 136 (1427)
Q Consensus 57 ~kkVLIagrGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~p 136 (1427)
-||+.|.+.+..+..+.+.++++|++++.+.+............++. .+ .|...+.+++++.++|.++.
T Consensus 313 Gkrv~i~~~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~~~~v-~~----------~D~~~le~~i~~~~pDllig 381 (458)
T 3pdi_B 313 SARTAIAADPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPLPSV-RV----------GDLEDLEHAARAGQAQLVIG 381 (458)
T ss_dssp TCEEEEECCHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTTSSCE-EE----------SHHHHHHHHHHHHTCSEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCccCcE-Ee----------CCHHHHHHHHHhcCCCEEEE
Confidence 47999999999999999999999999998876543211111112222 11 34567888888999999985
Q ss_pred CCCcccccHHHHHHHHHCCCcee
Q psy15244 137 GYGFLSEREDFAKAVIGAGLEFI 159 (1427)
Q Consensus 137 g~gflsE~~~~a~~~e~~Gi~fi 159 (1427)
+.- + ....++.|++++
T Consensus 382 ~~~---~----~~~a~k~gip~~ 397 (458)
T 3pdi_B 382 NSH---A----LASARRLGVPLL 397 (458)
T ss_dssp CTT---H----HHHHHHTTCCEE
T ss_pred Chh---H----HHHHHHcCCCEE
Confidence 532 2 234556788876
No 440
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=73.56 E-value=16 Score=40.51 Aligned_cols=88 Identities=10% Similarity=0.049 Sum_probs=55.4
Q ss_pred EEEEEc-CCHHHHHHHHHHHHc-CCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEEEe
Q psy15244 59 KILIAN-RSEVAIRVARACNEM-GIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAIHP 136 (1427)
Q Consensus 59 kVLIag-rGeia~riiraa~el-Gi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI~p 136 (1427)
||||.| .|.++..+++.+.+. |++++++..+++.........-+.+. .++.|.+.+.++.+ ++|.|+-
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~--------~D~~d~~~l~~~~~--~~d~vi~ 71 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQ--------LDYFNQESMVEAFK--GMDTVVF 71 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEE--------CCTTCHHHHHHHTT--TCSEEEE
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEE--------cCCCCHHHHHHHHh--CCCEEEE
Confidence 699999 699999999999998 99999887655432211111112222 23567777777665 6899886
Q ss_pred CCCccccc-------HHHHHHHHHCCC
Q psy15244 137 GYGFLSER-------EDFAKAVIGAGL 156 (1427)
Q Consensus 137 g~gflsE~-------~~~a~~~e~~Gi 156 (1427)
..+..... ..+.+++.+.|+
T Consensus 72 ~a~~~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 72 IPSIIHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCCccchhhHHHHHHHHHHHHHcCC
Confidence 65532211 134555666664
No 441
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=73.51 E-value=12 Score=42.40 Aligned_cols=123 Identities=19% Similarity=0.152 Sum_probs=83.9
Q ss_pred HHHHHhcCCCEEEEecc-CCh------------HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHH
Q psy15244 759 CRLASQAGIDIFRVFDP-LNS------------VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDL 825 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~-~nd------------~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~ 825 (1427)
...+.++|+|.+-+.++ ++. ++.|...++.+...-. . .+..-.|++ + -+++...+.
T Consensus 34 A~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~---~---PviaD~d~G--y---g~~~~~~~~ 102 (287)
T 3b8i_A 34 ARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAR---L---PVIADADHG--Y---GNALNVMRT 102 (287)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCS---S---CEEEECTTC--S---SSHHHHHHH
T ss_pred HHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCC---C---CEEEECCCC--C---CCHHHHHHH
Confidence 45566789999999888 552 2455555555444332 1 122221222 2 278889999
Q ss_pred HHHHHHCCCCEEEEccccC----------cCCHHHHHHHHHHHHHHc--CCceEEEeecCCcc----hHHHHHHHHHHhc
Q psy15244 826 AKQLVESGAQVLCLKDMAG----------LLKPTAAKLLIGSFREKY--PNILIHVHTHDMAG----TGVATTLACVKAG 889 (1427)
Q Consensus 826 a~~l~~~Gad~i~i~Dt~G----------~l~P~~~~~lv~~lr~~~--p~ipi~~H~Hnd~G----lA~An~laAi~AG 889 (1427)
++.+.++||..|.|=|..+ +..++++.+.|+++++.- ++.-|---+-. .. -++.-+.+-.+||
T Consensus 103 v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtda-a~~gl~~ai~Ra~ay~eAG 181 (287)
T 3b8i_A 103 VVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNA-ELIDVDAVIQRTLAYQEAG 181 (287)
T ss_dssp HHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEET-TTSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechh-hhcCHHHHHHHHHHHHHcC
Confidence 9999999999999999874 445567888899998874 45566655544 32 3777888999999
Q ss_pred CCEE
Q psy15244 890 ADIV 893 (1427)
Q Consensus 890 ad~V 893 (1427)
||.|
T Consensus 182 Ad~i 185 (287)
T 3b8i_A 182 ADGI 185 (287)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 9987
No 442
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=73.47 E-value=14 Score=40.79 Aligned_cols=112 Identities=13% Similarity=0.145 Sum_probs=66.9
Q ss_pred HHHHHHHHHhcCCCEEEEeccC-ChH-----HHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPL-NSV-----PNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQ 828 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~-nd~-----~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~ 828 (1427)
..+.++.+++.|.+.|-++..- .++ ..++...+.+++.|+ .+...-.|. ++..|.......+++.+.++.
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl---~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~ 92 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTL---EITMISDYL-DISLSADFEKTIEKCEQLAIL 92 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTC---CEEEEECCC-CCSTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCC---eEEEEecCC-CCCCchhHHHHHHHHHHHHHH
Confidence 5667999999999999997531 112 345556667778888 443221121 111221111235678888888
Q ss_pred HHHCCCCEEEEccccCcC-----CHHHHHHHHHHHHH------HcCCceEEEeecC
Q psy15244 829 LVESGAQVLCLKDMAGLL-----KPTAAKLLIGSFRE------KYPNILIHVHTHD 873 (1427)
Q Consensus 829 l~~~Gad~i~i~Dt~G~l-----~P~~~~~lv~~lr~------~~p~ipi~~H~Hn 873 (1427)
+.++|+..|.+. .|.. .+.....++..|++ .. ++.|.+|.|.
T Consensus 93 A~~lG~~~v~~~--~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-Gv~l~lE~~~ 145 (286)
T 3dx5_A 93 ANWFKTNKIRTF--AGQKGSADFSQQERQEYVNRIRMICELFAQH-NMYVLLETHP 145 (286)
T ss_dssp HHHHTCCEEEEC--SCSSCGGGSCHHHHHHHHHHHHHHHHHHHHT-TCEEEEECCT
T ss_pred HHHhCCCEEEEc--CCCCCcccCcHHHHHHHHHHHHHHHHHHHHh-CCEEEEecCC
Confidence 899999998772 3332 23333344444432 23 7899999885
No 443
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=73.33 E-value=30 Score=39.93 Aligned_cols=99 Identities=13% Similarity=0.076 Sum_probs=78.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHcC-CceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKYP-NILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~p-~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+| .|++++-.++++...+... .+||-.++ +|+..-++..+..|.++|
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 129 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAG 129 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 378999999999999999999999999988 6788888999999888764 58876654 567778888888999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..--+ . .|+-+.++..++
T Consensus 130 adavlv~~P~Y-~---~~s~~~l~~~f~ 153 (332)
T 2r8w_A 130 ADALLLAPVSY-T---PLTQEEAYHHFA 153 (332)
T ss_dssp CSEEEECCCCS-S---CCCHHHHHHHHH
T ss_pred CCEEEECCCCC-C---CCCHHHHHHHHH
Confidence 99986654333 2 245566666554
No 444
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=73.33 E-value=15 Score=39.95 Aligned_cols=199 Identities=10% Similarity=0.037 Sum_probs=106.4
Q ss_pred HHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHHHHH
Q psy15244 682 DLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAFCRL 761 (1427)
Q Consensus 682 d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~v~~ 761 (1427)
|..++++.+.+ .|++.|.+-. .|.... -+... +.++.+++.. +.++.. -| .-..|+ .++.
T Consensus 33 d~~~~a~~~~~--~Gad~i~v~~---~d~~~~-~~~~~-~~i~~i~~~~-~ipv~v--~g-----gI~~~~-----~~~~ 92 (244)
T 1vzw_A 33 SPLEAALAWQR--SGAEWLHLVD---LDAAFG-TGDNR-ALIAEVAQAM-DIKVEL--SG-----GIRDDD-----TLAA 92 (244)
T ss_dssp CHHHHHHHHHH--TTCSEEEEEE---HHHHHT-SCCCH-HHHHHHHHHC-SSEEEE--ES-----SCCSHH-----HHHH
T ss_pred CHHHHHHHHHH--cCCCEEEEec---Cchhhc-CCChH-HHHHHHHHhc-CCcEEE--EC-----CcCCHH-----HHHH
Confidence 77888898888 7999888632 122110 01122 6677887764 455443 12 111222 3788
Q ss_pred HHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeec-cCC-CCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q psy15244 762 ASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAG-DLT-NPNKKKYSLNYYEDLAKQLVESGAQVLCL 839 (1427)
Q Consensus 762 a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~-d~~-~p~~~~~~~~~~~~~a~~l~~~Gad~i~i 839 (1427)
+.++|+|.+.+-.. .+.+.....+..+..|. .+...+.... .+. .... ..+. ...++++.+.++|++.|.+
T Consensus 93 ~l~~Gad~V~lg~~--~l~~p~~~~~~~~~~g~---~~~~~l~~~~g~v~~~g~~-~~~~-~~~e~~~~~~~~G~~~i~~ 165 (244)
T 1vzw_A 93 ALATGCTRVNLGTA--ALETPEWVAKVIAEHGD---KIAVGLDVRGTTLRGRGWT-RDGG-DLYETLDRLNKEGCARYVV 165 (244)
T ss_dssp HHHTTCSEEEECHH--HHHCHHHHHHHHHHHGG---GEEEEEEEETTEECCSSSC-CCCC-BHHHHHHHHHHTTCCCEEE
T ss_pred HHHcCCCEEEECch--HhhCHHHHHHHHHHcCC---cEEEEEEccCCEEEEcCcc-cCCC-CHHHHHHHHHhCCCCEEEE
Confidence 88899999876553 22333334444455553 2222222110 000 0000 1111 3466778888899998887
Q ss_pred cccc--CcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHH-HHHHHHHHh---cCCEEEeccccCCCCCCCCcHHHHH
Q psy15244 840 KDMA--GLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGV-ATTLACVKA---GADIVDVAADSMSGICSQPAMGTIV 913 (1427)
Q Consensus 840 ~Dt~--G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~-An~laAi~A---Gad~VD~av~GmG~~tgn~~lE~vv 913 (1427)
-+.. |..... -.++++.+++.. ++||-.- -|... .++..+.++ ||+.|-+.-.=++ +.-++++++
T Consensus 166 ~~~~~~~~~~g~-~~~~~~~i~~~~-~ipvia~----GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~---~~~~~~~~~ 236 (244)
T 1vzw_A 166 TDIAKDGTLQGP-NLELLKNVCAAT-DRPVVAS----GGVSSLDDLRAIAGLVPAGVEGAIVGKALYA---KAFTLEEAL 236 (244)
T ss_dssp EEC-------CC-CHHHHHHHHHTC-SSCEEEE----SCCCSHHHHHHHHTTGGGTEEEEEECHHHHT---TSSCHHHHH
T ss_pred eccCcccccCCC-CHHHHHHHHHhc-CCCEEEE----CCCCCHHHHHHHHhhccCCCceeeeeHHHHc---CCCCHHHHH
Confidence 6532 211111 245777788776 7887653 46664 777888888 9887654432222 112455555
Q ss_pred HHH
Q psy15244 914 SCL 916 (1427)
Q Consensus 914 ~~L 916 (1427)
..|
T Consensus 237 ~~~ 239 (244)
T 1vzw_A 237 EAT 239 (244)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 445
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=73.28 E-value=5.9 Score=44.56 Aligned_cols=58 Identities=12% Similarity=0.163 Sum_probs=51.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCC--HHHHHHHHHHHHHHcCCceEEEeec
Q psy15244 810 TNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLK--PTAAKLLIGSFREKYPNILIHVHTH 872 (1427)
Q Consensus 810 ~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~--P~~~~~lv~~lr~~~p~ipi~~H~H 872 (1427)
.||+ +...+.+.+.++.+.+.|+|.|-|. |.|+ + .+.+.+++.++|+.+ ++|+-+|.=
T Consensus 45 iDPd--K~~~~~~~~~~~~~~~sGtDai~VG-S~~v-t~~~~~~~~~v~~ik~~~-~lPvil~fP 104 (286)
T 3vk5_A 45 IDPF--KVPVTEAVEKAAELTRLGFAAVLLA-STDY-ESFESHMEPYVAAVKAAT-PLPVVLHFP 104 (286)
T ss_dssp ECTT--TSCHHHHHHHHHHHHHTTCSCEEEE-CSCC-SSHHHHHHHHHHHHHHHC-SSCEEEECC
T ss_pred ECCC--CCCcHHHHHHHHHHHhcCCCEEEEc-cCCC-CcchHHHHHHHHHHHHhC-CCCEEEECC
Confidence 5897 6789999999999999999999999 9886 5 788999999999988 899999766
No 446
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=73.28 E-value=20 Score=41.15 Aligned_cols=99 Identities=17% Similarity=0.161 Sum_probs=79.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccCc---CCHHHHHHHHHHHHHHcC-CceEEEeecCCcchHHHHHHHHHHhcC
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAGL---LKPTAAKLLIGSFREKYP-NILIHVHTHDMAGTGVATTLACVKAGA 890 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~---l~P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~GlA~An~laAi~AGa 890 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+|= |+.++=.++++...+... .+||-.|+-++.--++..+..|.++||
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Ga 107 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGA 107 (316)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999984 678888889998888763 689888876677778888889999999
Q ss_pred CEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 891 DIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 891 d~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
|.+=+. .++- ..|+-+.++..++
T Consensus 108 davlv~-~P~y---~~~s~~~l~~~f~ 130 (316)
T 3e96_A 108 DAVMIH-MPIH---PYVTAGGVYAYFR 130 (316)
T ss_dssp SEEEEC-CCCC---SCCCHHHHHHHHH
T ss_pred CEEEEc-CCCC---CCCCHHHHHHHHH
Confidence 998654 3332 2345566666554
No 447
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=73.15 E-value=3.6 Score=45.47 Aligned_cols=116 Identities=12% Similarity=0.018 Sum_probs=69.5
Q ss_pred HHHHHHHHHhcCCCEEEEeccCC----hHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCC-CCCHHHHHHHHHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPLN----SVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKK-KYSLNYYEDLAKQL 829 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~n----d~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~-~~~~~~~~~~a~~l 829 (1427)
..+.++.+++.|++.|-++..-. +-..++...+.+++.|+ .+. ++++..+|.+|+.. +...+++.+.++.+
T Consensus 18 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~A 93 (281)
T 3u0h_A 18 LVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGL---VLA-NLGLPLNLYDSEPVFLRELSLLPDRARLC 93 (281)
T ss_dssp HHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTC---EEC-CEECCSCTTSCHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCC---ceE-EecccccccCCCHHHHHHHHHHHHHHHHH
Confidence 56778999999999998876422 11235556667778888 443 33444455444311 12346777888889
Q ss_pred HHCCCCEEEEccccCcCC-H-HHHHHHHHHHHHHc-----CCceEEEeecCC
Q psy15244 830 VESGAQVLCLKDMAGLLK-P-TAAKLLIGSFREKY-----PNILIHVHTHDM 874 (1427)
Q Consensus 830 ~~~Gad~i~i~Dt~G~l~-P-~~~~~lv~~lr~~~-----p~ipi~~H~Hnd 874 (1427)
.++|+..|.+.=..|.-. + .....++..|++.. -++.|.+|.|+.
T Consensus 94 ~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~ 145 (281)
T 3u0h_A 94 ARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGLEYVGP 145 (281)
T ss_dssp HHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCC
T ss_pred HHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 999999887421111112 2 23333444444321 178999999973
No 448
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=73.01 E-value=33 Score=38.96 Aligned_cols=99 Identities=10% Similarity=0.074 Sum_probs=78.7
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHc-CCceEEEeec-CCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKY-PNILIHVHTH-DMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~-p~ipi~~H~H-nd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+| .|++++-.++++...+.. +.+||-.|+= |+.--++..+..|.++|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 106 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYG 106 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCC
Confidence 478999999999999999999999999988 688888899999888876 3689887764 46677788888899999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..-.+- -|+-+.++..++
T Consensus 107 adavlv~~P~y~----~~s~~~l~~~f~ 130 (303)
T 2wkj_A 107 FDAVSAVTPFYY----PFSFEEHCDHYR 130 (303)
T ss_dssp CSEEEEECCCSS----CCCHHHHHHHHH
T ss_pred CCEEEecCCCCC----CCCHHHHHHHHH
Confidence 999876654332 245566665554
No 449
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=72.98 E-value=18 Score=42.63 Aligned_cols=71 Identities=10% Similarity=0.198 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccccC-----------cCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHH
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKDMAG-----------LLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLAC 885 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~Dt~G-----------~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laA 885 (1427)
.+.+...+.+++..+.|++.|-+.-+-| .+.|+....++...++. ++++.+|++.+ .....|
T Consensus 172 ~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~-----~~i~~a 244 (426)
T 2r8c_A 172 DGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGR--GTYVLAHAYTP-----AAIARA 244 (426)
T ss_dssp CSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHT--TCCEEEEECSH-----HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHc--CCEEEEEeCCh-----HHHHHH
Confidence 3567888888888889999877764433 57888899988888765 79999999943 345678
Q ss_pred HHhcCCEEE
Q psy15244 886 VKAGADIVD 894 (1427)
Q Consensus 886 i~AGad~VD 894 (1427)
+++|++.+.
T Consensus 245 l~~G~~~i~ 253 (426)
T 2r8c_A 245 VRCGVRTIE 253 (426)
T ss_dssp HHTTCSEEE
T ss_pred HHcCCCEEe
Confidence 889998764
No 450
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=72.96 E-value=14 Score=41.79 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHcC-CceEEEee-cCCcchHHHHHHHHHHhcCC
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKYP-NILIHVHT-HDMAGTGVATTLACVKAGAD 891 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~p-~ipi~~H~-Hnd~GlA~An~laAi~AGad 891 (1427)
.|.+-+.++++.+.+.|+|-|.++-|+| .+++++-.++++...+... .+||-.|+ +|+.--++..+..|.++|||
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVD 98 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999988 6788888899998888764 58876654 56778888888899999999
Q ss_pred EEEeccccCCCCCCCCcHHHHHHHHHh
Q psy15244 892 IVDVAADSMSGICSQPAMGTIVSCLEN 918 (1427)
Q Consensus 892 ~VD~av~GmG~~tgn~~lE~vv~~L~~ 918 (1427)
.+=+..--+ ..|+-+.++..++.
T Consensus 99 avlv~~P~y----~~~s~~~l~~~f~~ 121 (291)
T 3a5f_A 99 GLLVITPYY----NKTTQKGLVKHFKA 121 (291)
T ss_dssp EEEEECCCS----SCCCHHHHHHHC-C
T ss_pred EEEEcCCCC----CCCCHHHHHHHHHH
Confidence 987665433 23566788877764
No 451
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=72.95 E-value=20 Score=40.94 Aligned_cols=100 Identities=7% Similarity=0.051 Sum_probs=80.1
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHc-CCceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKY-PNILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~-p~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+| .|+.++-.++++...+.. +.+||-.|+ +|+..-++..+..|.++|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 102 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFG 102 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcC
Confidence 368999999999999999999999999999 588899999999999886 368888876 577888888888999999
Q ss_pred C-CEEEeccccCCCCCCCCcHHHHHHHHHh
Q psy15244 890 A-DIVDVAADSMSGICSQPAMGTIVSCLEN 918 (1427)
Q Consensus 890 a-d~VD~av~GmG~~tgn~~lE~vv~~L~~ 918 (1427)
+ |.+=+..--. .. |+-+.++..++.
T Consensus 103 a~davlv~~P~y-~~---~s~~~l~~~f~~ 128 (311)
T 3h5d_A 103 GFAAGLAIVPYY-NK---PSQEGMYQHFKA 128 (311)
T ss_dssp CCSEEEEECCCS-SC---CCHHHHHHHHHH
T ss_pred CCcEEEEcCCCC-CC---CCHHHHHHHHHH
Confidence 7 9886554333 22 455667766653
No 452
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=72.94 E-value=9.7 Score=47.32 Aligned_cols=92 Identities=16% Similarity=0.203 Sum_probs=67.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEc-cccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHh--cCCEE
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLK-DMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKA--GADIV 893 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~-Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~A--Gad~V 893 (1427)
.+.+..++.++++++.|||+|-|. +..+.-.++++.+++..+++.. ++||.+-+-+ ...+-+|+++ |+++|
T Consensus 337 ~~~~~a~~~A~~~v~~GAdiIDIgpg~~~v~~~ee~~rvv~~i~~~~-~vpisIDT~~-----~~v~eaal~~~~G~~iI 410 (566)
T 1q7z_A 337 GNEEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVS-NVPLSLDIQN-----VDLTERALRAYPGRSLF 410 (566)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECSSGGGSCHHHHHHHHHHHHHHT-CSCEEEECCC-----HHHHHHHHHHCSSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHhhC-CceEEEeCCC-----HHHHHHHHHhcCCCCEE
Confidence 367899999999999999999887 3333566889999999999887 8999996654 4566788899 99998
Q ss_pred EeccccCCCCCCCCcHHHHHHHHHhCC
Q psy15244 894 DVAADSMSGICSQPAMGTIVSCLENTD 920 (1427)
Q Consensus 894 D~av~GmG~~tgn~~lE~vv~~L~~~g 920 (1427)
+..-.+ +-.++.++...++.|
T Consensus 411 Ndis~~------~~~~~~~~~~~~~~g 431 (566)
T 1q7z_A 411 NSAKVD------EEELEMKINLLKKYG 431 (566)
T ss_dssp EEEESC------HHHHHHHHHHHHHHC
T ss_pred EECCcc------hhhHHHHHHHHHHhC
Confidence 754321 122345555555543
No 453
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=72.84 E-value=11 Score=43.46 Aligned_cols=101 Identities=21% Similarity=0.172 Sum_probs=79.1
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHc-CCceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKY-PNILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~-p~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++=|+| .|+.++=.++++...+.. +.+||-.|+ +|+.--++..+..|.++|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 106 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAG 106 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 368999999999999999999999999999 488888899999888876 368887776 678888999999999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..-..-.. .++-+.++..++
T Consensus 107 adavlv~~P~y~~k--p~~~~~l~~~f~ 132 (318)
T 3qfe_A 107 ANYVLVLPPAYFGK--ATTPPVIKSFFD 132 (318)
T ss_dssp CSEEEECCCCC-----CCCHHHHHHHHH
T ss_pred CCEEEEeCCcccCC--CCCHHHHHHHHH
Confidence 99986643323211 124566666554
No 454
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=72.77 E-value=53 Score=35.61 Aligned_cols=146 Identities=12% Similarity=0.006 Sum_probs=90.4
Q ss_pred chHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHC
Q psy15244 753 AEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVES 832 (1427)
Q Consensus 753 nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~ 832 (1427)
..+++.+++|.+.|++.+-+. ..+++... +..+..+. .+.. .. +.|.. ..+.+-.+.-++++.+.
T Consensus 19 ~~i~~l~~~a~~~~~~aVcv~--p~~v~~~~---~~l~~~~v---~v~~----vi--gFP~G-~~~~~~k~~e~~~Ai~~ 83 (220)
T 1ub3_A 19 EEVAKAAEEALEYGFYGLCIP--PSYVAWVR---ARYPHAPF---RLVT----VV--GFPLG-YQEKEVKALEAALACAR 83 (220)
T ss_dssp HHHHHHHHHHHHHTCSEEECC--GGGHHHHH---HHCTTCSS---EEEE----EE--STTTC-CSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEEC--HHHHHHHH---HHhCCCCc---eEEE----Ee--cCCCC-CCchHHHHHHHHHHHHc
Confidence 346778999999998876543 33444333 22222223 3322 22 23432 36667777788999999
Q ss_pred CCCEEEEccccCcC---CHHHHHHHHHHHHHHcCC--ceEEE--eecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCC
Q psy15244 833 GAQVLCLKDMAGLL---KPTAAKLLIGSFREKYPN--ILIHV--HTHDMAGTGVATTLACVKAGADIVDVAADSMSGICS 905 (1427)
Q Consensus 833 Gad~i~i~Dt~G~l---~P~~~~~lv~~lr~~~p~--ipi~~--H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tg 905 (1427)
|||.|-+.=-.|.+ .-..+.+-+.++++..++ +++-+ -..++- .=...+..|+++|||+|-++. |+ .+|
T Consensus 84 GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e-~i~~a~~ia~eaGADfVKTsT-Gf--~~~ 159 (220)
T 1ub3_A 84 GADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPE-EIARLAEAAIRGGADFLKTST-GF--GPR 159 (220)
T ss_dssp TCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHH-HHHHHHHHHHHHTCSEEECCC-SS--SSC
T ss_pred CCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHH-HHHHHHHHHHHhCCCEEEeCC-CC--CCC
Confidence 99988776556654 456788888888887633 44322 222222 222355678899999999985 22 246
Q ss_pred CCcHHHHHHHHH
Q psy15244 906 QPAMGTIVSCLE 917 (1427)
Q Consensus 906 n~~lE~vv~~L~ 917 (1427)
.+..|++-.+.+
T Consensus 160 gat~~dv~~m~~ 171 (220)
T 1ub3_A 160 GASLEDVALLVR 171 (220)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 677777666555
No 455
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=72.71 E-value=5.1 Score=45.50 Aligned_cols=75 Identities=15% Similarity=0.080 Sum_probs=56.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcccc--CcCCH--HHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCC
Q psy15244 816 KYSLNYYEDLAKQLVESGAQVLCLKDMA--GLLKP--TAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGAD 891 (1427)
Q Consensus 816 ~~~~~~~~~~a~~l~~~Gad~i~i~Dt~--G~l~P--~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad 891 (1427)
..+.+..+++++.+.++|++.|-+. +. +-..| ....++++.+++. +++++..|+-| ...+..|+++|++
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g-~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n-----~~~i~~a~~~G~~ 94 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEAT-SFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPN-----MKGYEAAAAAHAD 94 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEE-ECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSS-----HHHHHHHHHTTCS
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEc-cCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCC-----HHHHHHHHHCCCC
Confidence 3899999999999999999987764 11 11123 1455777777655 68999999843 4667789999999
Q ss_pred EEEecc
Q psy15244 892 IVDVAA 897 (1427)
Q Consensus 892 ~VD~av 897 (1427)
.|...+
T Consensus 95 ~V~i~~ 100 (295)
T 1ydn_A 95 EIAVFI 100 (295)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 988765
No 456
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=72.64 E-value=43 Score=37.68 Aligned_cols=156 Identities=13% Similarity=0.138 Sum_probs=90.0
Q ss_pred HHHHHHHhhcCCccEEeccCCCchhhhhhccc------cChHHHHHHHHHhCCCCceeeeecccccccccCC---CcchH
Q psy15244 685 KVSPFVANRFNNLYSLEMWGGAVSHTCLKFLK------ECPWERLAELRELIPNIPFQMILRGNSLVGYSNY---SPAEV 755 (1427)
Q Consensus 685 ~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~------e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~---~~nvv 755 (1427)
.-|+.+++ +|++.|=+|.+. --+.+.+-+ ++-....+.+++..++..+. + -.+|..| +++.+
T Consensus 45 ~sA~l~e~--aG~d~ilvGdSl-~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv----a--D~pfgsy~~s~~~a~ 115 (281)
T 1oy0_A 45 STARIFDE--AGIPVLLVGDSA-ANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVV----A--DLPFGSYEAGPTAAL 115 (281)
T ss_dssp HHHHHHHT--TTCCEEEECTTH-HHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEE----E--ECCTTSSTTCHHHHH
T ss_pred HHHHHHHH--cCCCEEEECHHH-HHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEE----E--ECCCCcccCCHHHHH
Confidence 55677788 799999543222 112222211 12234456666666554332 2 2345455 44444
Q ss_pred HHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEee-------ccCCCCCCCCCCHHHHHHHHHH
Q psy15244 756 GAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYA-------GDLTNPNKKKYSLNYYEDLAKQ 828 (1427)
Q Consensus 756 ~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t-------~d~~~p~~~~~~~~~~~~~a~~ 828 (1427)
+..++...++|++-+.|=+.. .+...|+++.++|. -+.+.|-.| ++|.--.++. ..+.+++-++.
T Consensus 116 ~na~rl~~eaGa~aVklEdg~----e~~~~I~al~~agI---pV~gHiGLtPqsv~~~ggf~v~grt~-~a~~~i~rA~a 187 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLEGGE----RVAEQIACLTAAGI---PVMAHIGFTPQSVNTLGGFRVQGRGD-AAEQTIADAIA 187 (281)
T ss_dssp HHHHHHHHTTCCSEEEEEBSG----GGHHHHHHHHHHTC---CEEEEEECCC--------------CH-HHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEECCcH----HHHHHHHHHHHCCC---CEEeeecCCcceecccCCeEEEeCcH-HHHHHHHHHHH
Confidence 445566666999999999983 46666777788887 444333322 1110000111 34778888999
Q ss_pred HHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCce
Q psy15244 829 LVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNIL 866 (1427)
Q Consensus 829 l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ip 866 (1427)
++++||+.|.+- +.|. ++.+.+.+++ ++|
T Consensus 188 ~~eAGA~~ivlE-----~vp~---~~a~~it~~l-~iP 216 (281)
T 1oy0_A 188 VAEAGAFAVVME-----MVPA---ELATQITGKL-TIP 216 (281)
T ss_dssp HHHHTCSEEEEE-----SCCH---HHHHHHHHHC-SSC
T ss_pred HHHcCCcEEEEe-----cCCH---HHHHHHHHhC-CCC
Confidence 999999999884 2343 4566777777 577
No 457
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=72.61 E-value=4.4 Score=44.94 Aligned_cols=89 Identities=13% Similarity=0.013 Sum_probs=54.7
Q ss_pred CEEEEEc-CCHHHHHHHHHHHHc--CCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 58 EKILIAN-RSEVAIRVARACNEM--GIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 58 kkVLIag-rGeia~riiraa~el--Gi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
++|||.| .|.++..+++.+.+. |++++++..+.+.........-+.+. .++.|.+.+.++.+ ++|.|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~--------~D~~d~~~l~~~~~--~~d~v 70 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRH--------GDYNQPESLQKAFA--GVSKL 70 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEE--------CCTTCHHHHHHHTT--TCSEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEE--------eccCCHHHHHHHHh--cCCEE
Confidence 4799999 599999999999998 99998887654421100000011222 23456777777665 58988
Q ss_pred EeCCCccc-c--cH----HHHHHHHHCCC
Q psy15244 135 HPGYGFLS-E--RE----DFAKAVIGAGL 156 (1427)
Q Consensus 135 ~pg~gfls-E--~~----~~a~~~e~~Gi 156 (1427)
+-..+... . |. .+.++|.+.|+
T Consensus 71 i~~a~~~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 71 LFISGPHYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp EECCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred EEcCCCCcCchHHHHHHHHHHHHHHHcCC
Confidence 76544211 1 21 45566777776
No 458
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=72.52 E-value=72 Score=36.77 Aligned_cols=150 Identities=15% Similarity=0.058 Sum_probs=94.2
Q ss_pred CCcchHHHHHHHHHhcCCCEEEEeccCC---h-------HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCH
Q psy15244 750 YSPAEVGAFCRLASQAGIDIFRVFDPLN---S-------VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSL 819 (1427)
Q Consensus 750 ~~~nvv~~~v~~a~~~Gid~~rif~~~n---d-------~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~ 819 (1427)
.|+.+..-.++.+++.|.|.+.+..... + +..+.+..+.+++.|+. .+--.+.|..++.+ ..+.
T Consensus 107 ~p~~l~~~sve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiP--lllEil~y~~~~~~----~~~~ 180 (332)
T 3iv3_A 107 LPDCLVDWSIKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIP--FFLEILTYDETISN----NSSV 180 (332)
T ss_dssp CCCBCTTCCHHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEECBTTBSC----TTSH
T ss_pred CCccccccCHHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCc--eEEEEeccCCCCCC----Ccch
Confidence 4444555569999999999877665553 1 34677888899999992 33334555533222 3554
Q ss_pred HH-------HHHHHHHH--HHCCCCEEEEcccc------Cc------CCHHHHHHHHHHHHHHcCCceEEE-eecCCcch
Q psy15244 820 NY-------YEDLAKQL--VESGAQVLCLKDMA------GL------LKPTAAKLLIGSFREKYPNILIHV-HTHDMAGT 877 (1427)
Q Consensus 820 ~~-------~~~~a~~l--~~~Gad~i~i~Dt~------G~------l~P~~~~~lv~~lr~~~p~ipi~~-H~Hnd~Gl 877 (1427)
+| +...++.+ .+.|+|.+-+.=+. |. -+-.++.+.++.+-+.. .+|+-+ =.=-+.-.
T Consensus 181 ~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~-~~P~v~lsgG~~~~~ 259 (332)
T 3iv3_A 181 EFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST-DLPYIYLSAGVSAEL 259 (332)
T ss_dssp HHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC-SSCEEEECTTCCHHH
T ss_pred hhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC-CCCEEEECCCCCHHH
Confidence 55 99999999 67899999886322 21 13355656666666665 788553 32233334
Q ss_pred HHHHHHHHHHhcC--CEEEeccccCCCCCCCCcHHH
Q psy15244 878 GVATTLACVKAGA--DIVDVAADSMSGICSQPAMGT 911 (1427)
Q Consensus 878 A~An~laAi~AGa--d~VD~av~GmG~~tgn~~lE~ 911 (1427)
-+-..-.|++||| .-|- +|+-+.|.+++.
T Consensus 260 fl~~v~~A~~aGa~f~Gv~-----~GRnvwq~~v~~ 290 (332)
T 3iv3_A 260 FQETLVFAHKAGAKFNGVL-----CGRATWAGSVQV 290 (332)
T ss_dssp HHHHHHHHHHHTCCCCEEE-----ECHHHHTTHHHH
T ss_pred HHHHHHHHHHcCCCcceEE-----eeHHHHHhhhhh
Confidence 4555668999999 5552 345555655443
No 459
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=72.42 E-value=22 Score=39.15 Aligned_cols=112 Identities=15% Similarity=0.086 Sum_probs=67.2
Q ss_pred HHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCC--------CCCCCCCHHHHHHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTN--------PNKKKYSLNYYEDLA 826 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~--------p~~~~~~~~~~~~~a 826 (1427)
..+.++.+++.|++.|-++.+.. ...+...+.+++.|+ .+...-+...+|.. |..-....+++.+.+
T Consensus 25 ~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~l~~~gl---~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i 99 (269)
T 3ngf_A 25 FLERFRLAAEAGFGGVEFLFPYD--FDADVIARELKQHNL---TQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIAL 99 (269)
T ss_dssp HHHHHHHHHHTTCSEEECSCCTT--SCHHHHHHHHHHTTC---EEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCcc--CCHHHHHHHHHHcCC---cEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHH
Confidence 56789999999999999986532 235555667778898 55432222233321 111112457788888
Q ss_pred HHHHHCCCCEEEEccccC----cCCHHHHHHHHHHHHHHc-----CCceEEEeecC
Q psy15244 827 KQLVESGAQVLCLKDMAG----LLKPTAAKLLIGSFREKY-----PNILIHVHTHD 873 (1427)
Q Consensus 827 ~~l~~~Gad~i~i~Dt~G----~l~P~~~~~lv~~lr~~~-----p~ipi~~H~Hn 873 (1427)
+.+.++|+..|.+. .| .........++..|++.. -++.|.+|..|
T Consensus 100 ~~A~~lGa~~v~~~--~g~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n 153 (269)
T 3ngf_A 100 HYALALDCRTLHAM--SGITEGLDRKACEETFIENFRYAADKLAPHGITVLVEPLN 153 (269)
T ss_dssp HHHHHTTCCEEECC--BCBCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCC
T ss_pred HHHHHcCCCEEEEc--cCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCC
Confidence 89999999998873 33 112223344444444321 16778887644
No 460
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=72.39 E-value=21 Score=40.12 Aligned_cols=98 Identities=15% Similarity=0.139 Sum_probs=66.6
Q ss_pred HHHHHhcCCCEEEEeccCC------------hHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHH
Q psy15244 759 CRLASQAGIDIFRVFDPLN------------SVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLA 826 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~~n------------d~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a 826 (1427)
.+.+.++|+|.+-+-+|+. .++.|...++.+...-. ...+. .| -|..+-.+++..++-+
T Consensus 42 A~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~-~~~vv------aD--~pfgsY~s~~~a~~~a 112 (275)
T 3vav_A 42 AALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQP-RALIV------AD--LPFGTYGTPADAFASA 112 (275)
T ss_dssp HHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCC-SSEEE------EE--CCTTSCSSHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCC-CCCEE------Ee--cCCCCCCCHHHHHHHH
Confidence 5566689999998877775 24566666665554332 01221 22 3433236888989999
Q ss_pred HHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecC
Q psy15244 827 KQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHD 873 (1427)
Q Consensus 827 ~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hn 873 (1427)
.++.++||+.|.|-|.. ...+.|++|+++ ++|+--|.=-
T Consensus 113 ~rl~kaGa~aVklEdg~------~~~~~i~~l~~~--GIpv~gHlgl 151 (275)
T 3vav_A 113 VKLMRAGAQMVKFEGGE------WLAETVRFLVER--AVPVCAHVGL 151 (275)
T ss_dssp HHHHHTTCSEEEEECCG------GGHHHHHHHHHT--TCCEEEEEES
T ss_pred HHHHHcCCCEEEECCch------hHHHHHHHHHHC--CCCEEEecCC
Confidence 99999999999999963 346678888765 6898888643
No 461
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=72.31 E-value=7.7 Score=43.61 Aligned_cols=68 Identities=10% Similarity=0.076 Sum_probs=39.7
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 56 TMEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 56 ~~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
|.++|||.| .|.++..+++.+.+.|++++++....+. ...+. .+..+.+.+.++.+..++|+|
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~--------~Dl~d~~~~~~~~~~~~~d~v 64 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------PKFEQ--------VNLLDSNAVHHIIHDFQPHVI 64 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCCSEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------CCeEE--------ecCCCHHHHHHHHHhhCCCEE
Confidence 356999999 5999999999999999998887643221 01111 122344555556665578988
Q ss_pred EeCCC
Q psy15244 135 HPGYG 139 (1427)
Q Consensus 135 ~pg~g 139 (1427)
+-.-+
T Consensus 65 ih~A~ 69 (315)
T 2ydy_A 65 VHCAA 69 (315)
T ss_dssp EECC-
T ss_pred EECCc
Confidence 86654
No 462
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=72.26 E-value=13 Score=42.68 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=79.6
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccCc---CCHHHHHHHHHHHHHHc-CCceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAGL---LKPTAAKLLIGSFREKY-PNILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~---l~P~~~~~lv~~lr~~~-p~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+|= |+.++-.++++...+.. +.+||-.|+ +|+.--++..+..|.++|
T Consensus 39 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~G 118 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGG 118 (314)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999994 68888888998888776 368887776 678888889999999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..--. . .|+-+.++..++
T Consensus 119 adavlv~~P~y-~---~~s~~~l~~~f~ 142 (314)
T 3qze_A 119 ADACLLVTPYY-N---KPTQEGMYQHFR 142 (314)
T ss_dssp CSEEEEECCCS-S---CCCHHHHHHHHH
T ss_pred CCEEEEcCCCC-C---CCCHHHHHHHHH
Confidence 99986654333 2 245566666655
No 463
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=72.23 E-value=7.9 Score=43.12 Aligned_cols=116 Identities=12% Similarity=0.072 Sum_probs=71.2
Q ss_pred hHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEee--ccCCCCCC--CCCCHHHHHHHHHHH
Q psy15244 754 EVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYA--GDLTNPNK--KKYSLNYYEDLAKQL 829 (1427)
Q Consensus 754 vv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t--~d~~~p~~--~~~~~~~~~~~a~~l 829 (1427)
-..+.++.+++.|++.|-++..-. -..++...+.+++.|+ .+.. ++.. +++.+++. -....+++.+.++.+
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~gl---~v~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a 113 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGGL-AGRVNEIKQALNGRNI---KVSA-ICAGFKGFILSTDPAIRKECMDTMKEIIAAA 113 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTC-GGGHHHHHHHHTTSSC---EECE-EECCCCSCTTBSSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCCch-HHHHHHHHHHHHHcCC---eEEE-EecCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 367789999999999999987721 2345555566777888 4432 2321 22222221 012357888888999
Q ss_pred HHCCCCEEEEccccCc------CCHHHHHHHHHHHHH------HcCCceEEEeecCCc
Q psy15244 830 VESGAQVLCLKDMAGL------LKPTAAKLLIGSFRE------KYPNILIHVHTHDMA 875 (1427)
Q Consensus 830 ~~~Gad~i~i~Dt~G~------l~P~~~~~lv~~lr~------~~p~ipi~~H~Hnd~ 875 (1427)
.++|+..|.+.-..|. ........++..|++ .. ++.|.+|.||..
T Consensus 114 ~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~-Gv~l~lE~~~~~ 170 (287)
T 3kws_A 114 GELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQH-GTSVIFEPLNRK 170 (287)
T ss_dssp HHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHT-TCCEEECCCCTT
T ss_pred HHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCEEEEEecCcc
Confidence 9999999887422121 233334444444432 23 789999999853
No 464
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=72.14 E-value=22 Score=37.68 Aligned_cols=157 Identities=15% Similarity=0.062 Sum_probs=86.6
Q ss_pred HHHHHHHHHHhhcCCccEEeccCCC-chhhhhhccccChHHHHHHHHHhCC--CCceeeeecccccccccCCCcchHHHH
Q psy15244 682 DLKKVSPFVANRFNNLYSLEMWGGA-VSHTCLKFLKECPWERLAELRELIP--NIPFQMILRGNSLVGYSNYSPAEVGAF 758 (1427)
Q Consensus 682 d~l~ia~~l~~~~~G~~~iE~~gga-tfd~~~rfl~e~p~erl~~lr~~~p--~~~~qml~Rg~n~vgy~~~~~nvv~~~ 758 (1427)
+..+.++.+.+ .|++.|++.-.. ++. .-.+.++.+++... ++++. + ..+
T Consensus 27 ~~~~~~~~~~~--~G~~~i~l~~~~~~~~--------~~~~~~~~l~~~~~~~~v~v~--v----------------~~~ 78 (215)
T 1xi3_A 27 PEVESVREALE--GGATAIQMRIKNAPTR--------EMYEIGKTLRQLTREYDALFF--V----------------DDR 78 (215)
T ss_dssp CHHHHHHHHHH--TTCSEEEECCCSCCHH--------HHHHHHHHHHHHHHHTTCEEE--E----------------ESC
T ss_pred hHHHHHHHHHH--CCCCEEEECCCCCCHH--------HHHHHHHHHHHHHHHcCCeEE--E----------------cCh
Confidence 45667777777 799999975321 111 01233444444322 22222 1 123
Q ss_pred HHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q psy15244 759 CRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLC 838 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~ 838 (1427)
++.+.++|+|.+.+-....+.+.++. .. .+. .+... .++++.+ ..+.+.|+|.|.
T Consensus 79 ~~~a~~~gad~v~l~~~~~~~~~~~~----~~-~~~---~~~v~-------------~~t~~e~----~~~~~~g~d~i~ 133 (215)
T 1xi3_A 79 VDVALAVDADGVQLGPEDMPIEVAKE----IA-PNL---IIGAS-------------VYSLEEA----LEAEKKGADYLG 133 (215)
T ss_dssp HHHHHHHTCSEEEECTTSCCHHHHHH----HC-TTS---EEEEE-------------ESSHHHH----HHHHHHTCSEEE
T ss_pred HHHHHHcCCCEEEECCccCCHHHHHH----hC-CCC---EEEEe-------------cCCHHHH----HHHHhcCCCEEE
Confidence 67888999999987533233333322 12 333 32221 1344332 345678999887
Q ss_pred E---ccccCc--CCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEecc
Q psy15244 839 L---KDMAGL--LKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 839 i---~Dt~G~--l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av 897 (1427)
+ .+|.+- ..|. ..++++.+++.. ++||.. ..|....|...++++|++.|++.-
T Consensus 134 ~~~~~~~~~~~~~~~~-~~~~l~~l~~~~-~~pvia----~GGI~~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 134 AGSVFPTKTKEDARVI-GLEGLRKIVESV-KIPVVA----IGGINKDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp EECSSCC----CCCCC-HHHHHHHHHHHC-SSCEEE----ESSCCTTTHHHHHTTTCSEEEESH
T ss_pred EcCCccCCCCCCCCCc-CHHHHHHHHHhC-CCCEEE----ECCcCHHHHHHHHHcCCCEEEEhH
Confidence 6 333210 1222 244567777776 778765 356666788888899999998764
No 465
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=72.12 E-value=12 Score=43.41 Aligned_cols=80 Identities=14% Similarity=0.034 Sum_probs=51.4
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccC--cccccc--------ceEEEcCCCCCcccCCCCHHHHH
Q psy15244 55 KTMEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFS--AHRTKV--------DQAFLVGKGMPPVAAYLNIPEII 123 (1427)
Q Consensus 55 ~~~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s--~~~~~a--------De~~~i~~~~~~~~~yldi~~Ii 123 (1427)
.|+++|||.| .|.|+..+++.+.+.|++++++........ ....+. .....+ ..+..|.+.+.
T Consensus 22 ~M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~------~~Dl~d~~~~~ 95 (375)
T 1t2a_A 22 HMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH------YGDLTDSTCLV 95 (375)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEE------ECCTTCHHHHH
T ss_pred hcCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEE------EccCCCHHHHH
Confidence 3458999999 699999999999999999988875543210 001110 111111 12345677888
Q ss_pred HHHHhcCCCEEEeCCCc
Q psy15244 124 CIAKNNNVDAIHPGYGF 140 (1427)
Q Consensus 124 ~ia~~~~vDaI~pg~gf 140 (1427)
++++..++|.|+-.-+.
T Consensus 96 ~~~~~~~~d~vih~A~~ 112 (375)
T 1t2a_A 96 KIINEVKPTEIYNLGAQ 112 (375)
T ss_dssp HHHHHHCCSEEEECCSC
T ss_pred HHHHhcCCCEEEECCCc
Confidence 88877789998866553
No 466
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=72.08 E-value=29 Score=42.47 Aligned_cols=77 Identities=23% Similarity=0.174 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccC
Q psy15244 821 YYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSM 900 (1427)
Q Consensus 821 ~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~Gm 900 (1427)
...+.++.|.++|+|.|+| |++-.- -..+.++++.+|+.+|+++|-.=-=.|. ..+.+-+++|||.|-+.+.+=
T Consensus 281 d~~eR~~aLv~AGvD~ivi-D~ahGh-s~~v~~~i~~ik~~~p~~~viaGNVaT~----e~a~~Li~aGAD~vkVGiGpG 354 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVL-DSSQGN-SVYQIEFIKWIKQTYPKIDVIAGNVVTR----EQAAQLIAAGADGLRIGMGSG 354 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEE-CCSCCC-SHHHHHHHHHHHHHCTTSEEEEEEECSH----HHHHHHHHHTCSEEEECSSCS
T ss_pred cHHHHHHHHHhcCCcEEEE-eccccc-cHHHHHHHHHHHhhCCcceEEeccccCH----HHHHHHHHcCCCEEeecCCCC
Confidence 4567789999999999988 665432 3467889999999999999765332222 234566789999998877664
Q ss_pred CCC
Q psy15244 901 SGI 903 (1427)
Q Consensus 901 G~~ 903 (1427)
+-|
T Consensus 355 SiC 357 (556)
T 4af0_A 355 SIC 357 (556)
T ss_dssp TTB
T ss_pred ccc
Confidence 433
No 467
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=71.96 E-value=27 Score=40.75 Aligned_cols=115 Identities=14% Similarity=0.155 Sum_probs=75.4
Q ss_pred HHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCC
Q psy15244 755 VGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGA 834 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Ga 834 (1427)
....++.+.+.|++.+.+...... ...++.+++.|. .+-.. ..+.+ .++.+.++|+
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~~~----~~~i~~~~~~g~---~v~~~-------------v~t~~----~a~~a~~~Ga 166 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGVPD----REVIARLRRAGT---LTLVT-------------ATTPE----EARAVEAAGA 166 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSCCC----HHHHHHHHHTTC---EEEEE-------------ESSHH----HHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCc----HHHHHHHHHCCC---eEEEE-------------CCCHH----HHHHHHHcCC
Confidence 466788999999999988654433 234555666777 44332 12333 4667888999
Q ss_pred CEEEEccc-----cCcCCH--------HHHHHHHHHHHHHcCCceEEEeecCCcch-HHHHHHHHHHhcCCEEEeccc
Q psy15244 835 QVLCLKDM-----AGLLKP--------TAAKLLIGSFREKYPNILIHVHTHDMAGT-GVATTLACVKAGADIVDVAAD 898 (1427)
Q Consensus 835 d~i~i~Dt-----~G~l~P--------~~~~~lv~~lr~~~p~ipi~~H~Hnd~Gl-A~An~laAi~AGad~VD~av~ 898 (1427)
|.|.+--. .|...| .....+++.+++.+ ++||-.= -|. -..|+.+++.+|||.|...-.
T Consensus 167 D~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~-~iPViaa----GGI~~~~~~~~~l~~GAd~V~vGs~ 239 (369)
T 3bw2_A 167 DAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV-DIPVVAA----GGIMRGGQIAAVLAAGADAAQLGTA 239 (369)
T ss_dssp SEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC-SSCEEEE----SSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred CEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc-CceEEEE----CCCCCHHHHHHHHHcCCCEEEEChH
Confidence 99988221 132211 23467788888887 7887653 345 456778888999999987643
No 468
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=71.89 E-value=12 Score=42.65 Aligned_cols=154 Identities=16% Similarity=0.185 Sum_probs=95.5
Q ss_pred cccCCCcchHHHHHHHHHhcCCCEEEEeccCC-------------hHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCC
Q psy15244 746 GYSNYSPAEVGAFCRLASQAGIDIFRVFDPLN-------------SVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNP 812 (1427)
Q Consensus 746 gy~~~~~nvv~~~v~~a~~~Gid~~rif~~~n-------------d~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p 812 (1427)
||.+ +.|+ ...++...+.|+.-+.|=|... +.+.+..-|++++++|. +..+.+ -| +.
T Consensus 99 Gyg~-~~~v-~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~-~~~I~A---Rt----da 168 (305)
T 3ih1_A 99 GFGG-VLNV-ARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAP-SLYIVA---RT----DA 168 (305)
T ss_dssp CSSS-HHHH-HHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCT-TSEEEE---EE----CC
T ss_pred CCCC-HHHH-HHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCC-CeEEEE---ee----cc
Confidence 6644 5664 4468888889999999999863 45566667777777765 123322 12 11
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcch-HHHHHHHHHHhcCC
Q psy15244 813 NKKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGT-GVATTLACVKAGAD 891 (1427)
Q Consensus 813 ~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~Gl-A~An~laAi~AGad 891 (1427)
......+..++-++.+.++|||.|.+- |+-.++. ++.+.+++ ++|+-+-.-. .|. ..-+.-.--+.|+.
T Consensus 169 -~~~~g~~~ai~Ra~ay~eAGAD~i~~e---~~~~~~~----~~~i~~~~-~~P~~~n~~~-~g~tp~~~~~eL~~lGv~ 238 (305)
T 3ih1_A 169 -RGVEGLDEAIERANAYVKAGADAIFPE---ALQSEEE----FRLFNSKV-NAPLLANMTE-FGKTPYYSAEEFANMGFQ 238 (305)
T ss_dssp -HHHHCHHHHHHHHHHHHHHTCSEEEET---TCCSHHH----HHHHHHHS-CSCBEEECCT-TSSSCCCCHHHHHHTTCS
T ss_pred -ccccCHHHHHHHHHHHHHcCCCEEEEc---CCCCHHH----HHHHHHHc-CCCEEEeecC-CCCCCCCCHHHHHHcCCC
Confidence 012357889999999999999999884 3334444 44555566 5676432210 111 01234556678999
Q ss_pred EEEeccccCCCCCCCCcHHHHHHHHHhCCC
Q psy15244 892 IVDVAADSMSGICSQPAMGTIVSCLENTDK 921 (1427)
Q Consensus 892 ~VD~av~GmG~~tgn~~lE~vv~~L~~~g~ 921 (1427)
+|-.....+ ++.+.++.+++..|+..|.
T Consensus 239 ~v~~~~~~~--raa~~a~~~~~~~i~~~g~ 266 (305)
T 3ih1_A 239 MVIYPVTSL--RVAAKAYENVFTLIKETGS 266 (305)
T ss_dssp EEEECSHHH--HHHHHHHHHHHHHHHHHSS
T ss_pred EEEEchHHH--HHHHHHHHHHHHHHHhcCC
Confidence 996655443 5556677777777776554
No 469
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=71.82 E-value=11 Score=43.74 Aligned_cols=142 Identities=11% Similarity=0.061 Sum_probs=86.8
Q ss_pred CCEEEEEcCCHHHH-HHHHHHHHc-CCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCEE
Q psy15244 57 MEKILIANRSEVAI-RVARACNEM-GIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDAI 134 (1427)
Q Consensus 57 ~kkVLIagrGeia~-riiraa~el-Gi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDaI 134 (1427)
+.||.|+|-|.++. ..++++++. |++++++++.... .....+++. - ...|.+.++++ ...++|+|
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~--~~~~~a~~~-g-------~~~~~~~~~ll---~~~~~D~V 93 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWD--RAKRFTERF-G-------GEPVEGYPALL---ERDDVDAV 93 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHH--HHHHHHHHH-C-------SEEEESHHHHH---TCTTCSEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHH--HHHHHHHHc-C-------CCCcCCHHHHh---cCCCCCEE
Confidence 45899999999998 689999998 8888878654221 111222221 1 11244455554 35679999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeC-----CCHHHHHHhCCHHHHHHHHHhCCCCCCCCccc-cCCCHHHHHHHHH--h
Q psy15244 135 HPGYGFLSEREDFAKAVIGAGLEFIG-----PAPNVLKTLGDKVLARDAALKADVPIIPGTTE-PVTDVDKVKEFCD--E 206 (1427)
Q Consensus 135 ~pg~gflsE~~~~a~~~e~~Gi~fiG-----ps~eai~~~~DK~~~r~~a~~aGVpvp~~~~~-~v~s~eea~~~a~--~ 206 (1427)
+-..- -....+.+..+.++|..++- .+.+-+ ..+.+++++.|+..-.+... .......+++.++ .
T Consensus 94 ~i~tp-~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea------~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~ 166 (350)
T 3rc1_A 94 YVPLP-AVLHAEWIDRALRAGKHVLAEKPLTTDRPQA------ERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGV 166 (350)
T ss_dssp EECCC-GGGHHHHHHHHHHTTCEEEEESSSCSSHHHH------HHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTT
T ss_pred EECCC-cHHHHHHHHHHHHCCCcEEEeCCCCCCHHHH------HHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCC
Confidence 87643 22345677788889987653 333333 24556778889876543211 1233466677666 6
Q ss_pred cCCcEEEeecCC
Q psy15244 207 VEFPVILKAAFG 218 (1427)
Q Consensus 207 iGyPvVVKP~~G 218 (1427)
+|-+..+....+
T Consensus 167 iG~i~~v~~~~~ 178 (350)
T 3rc1_A 167 IGEIRSFAASFT 178 (350)
T ss_dssp TCSEEEEEEEEE
T ss_pred CCCeEEEEEEEe
Confidence 787777776543
No 470
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=71.79 E-value=17 Score=41.54 Aligned_cols=76 Identities=9% Similarity=0.072 Sum_probs=49.8
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCcccc-c---------cceEEEcCCCCCcccCCCCHHHHHH
Q psy15244 56 TMEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRT-K---------VDQAFLVGKGMPPVAAYLNIPEIIC 124 (1427)
Q Consensus 56 ~~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~~-~---------aDe~~~i~~~~~~~~~yldi~~Ii~ 124 (1427)
++++|||.| .|.++..+++.+.+.|++++++............ + ..-.+.. .+..|.+.+.+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~Dl~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE-------GDIRDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEE-------CCTTCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEE-------ccCCCHHHHHH
Confidence 357999999 6999999999999999999988754432111000 0 1112221 13456777777
Q ss_pred HHHhcCCCEEEeCCCc
Q psy15244 125 IAKNNNVDAIHPGYGF 140 (1427)
Q Consensus 125 ia~~~~vDaI~pg~gf 140 (1427)
+++ ++|+|+-.-+.
T Consensus 97 ~~~--~~d~Vih~A~~ 110 (351)
T 3ruf_A 97 VMK--GVDHVLHQAAL 110 (351)
T ss_dssp HTT--TCSEEEECCCC
T ss_pred Hhc--CCCEEEECCcc
Confidence 666 79998866553
No 471
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=71.75 E-value=31 Score=37.90 Aligned_cols=176 Identities=11% Similarity=0.198 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChH-------HHHHHHHHhCCCCcee---eeecccccccccCCCc
Q psy15244 683 LKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPW-------ERLAELRELIPNIPFQ---MILRGNSLVGYSNYSP 752 (1427)
Q Consensus 683 ~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~-------erl~~lr~~~p~~~~q---ml~Rg~n~vgy~~~~~ 752 (1427)
....++.+.+ .|++.||+|.. ....| +.++.+++.+....+. ..+-+.-.+.+....+
T Consensus 14 l~~~l~~~~~--~G~~~vEl~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~ 81 (285)
T 1qtw_A 14 LANAAIRAAE--IDATAFALFTK----------NQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVT 81 (285)
T ss_dssp HHHHHHHHHH--TTCSEEECCSS----------CSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSH
T ss_pred HHHHHHHHHH--cCCCEEEeeCC----------CCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCH
Q ss_pred c-------hHHHHHHHHHhcCCCEEEEe--------ccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCC
Q psy15244 753 A-------EVGAFCRLASQAGIDIFRVF--------DPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKY 817 (1427)
Q Consensus 753 n-------vv~~~v~~a~~~Gid~~rif--------~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~ 817 (1427)
. ..+..++.|.+.|++.+.+. +.-..++.+...++.+.+... -+..++....+..... -.
T Consensus 82 ~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~---gv~l~lEn~~~~~~~~--~~ 156 (285)
T 1qtw_A 82 EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQ---GVTAVIENTAGQGSNL--GF 156 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCS---SCEEEEECCCCCTTBC--CS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccC---CCEEEEecCCCCCCcc--cC
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccc-------cCcCCHHHHHHHHHHHHHHcC-CceEEEeecCCcc
Q psy15244 818 SLNYYEDLAKQLVESGAQVLCLKDM-------AGLLKPTAAKLLIGSFREKYP-NILIHVHTHDMAG 876 (1427)
Q Consensus 818 ~~~~~~~~a~~l~~~Gad~i~i~Dt-------~G~l~P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~G 876 (1427)
+.+.+.++++.+.+..-=.+++ |+ .....|....+.+..+.+..+ +--.++|.||..+
T Consensus 157 ~~~~~~~l~~~v~~~~~~g~~~-D~~H~~~~g~~~~~~~~~~~~~~~~~~~~g~~~i~~vH~~D~~~ 222 (285)
T 1qtw_A 157 KFEHLAAIIDGVEDKSRVGVCI-DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKS 222 (285)
T ss_dssp SHHHHHHHHHHCSCGGGEEEEE-EHHHHHHHTCCCSSHHHHHHHHHHHHHHTCGGGEEEEEECEESS
T ss_pred CHHHHHHHHHhhcCccceEEEE-EhHhHHHcCCCcCChHHHHHHHHHHHHhcCccceeEEEEecCCC
No 472
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=71.61 E-value=28 Score=46.41 Aligned_cols=79 Identities=24% Similarity=0.266 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEc---------cccCc---CCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHH
Q psy15244 817 YSLNYYEDLAKQLVESGAQVLCLK---------DMAGL---LKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLA 884 (1427)
Q Consensus 817 ~~~~~~~~~a~~l~~~Gad~i~i~---------Dt~G~---l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~la 884 (1427)
.+.+.+.++++.+.++|+|.|.|- +..|. -.|..+.++++++|+.+ ++||.+-.--+.--....+.+
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~-~~Pv~vK~~~~~~~~~~~a~~ 723 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV-QIPFFAKLTPNVTDIVSIARA 723 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-SSCEEEEECSCSSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-CCceEEEeCCChHHHHHHHHH
Confidence 567788888888888888877771 11121 46889999999999998 788887554444445556778
Q ss_pred HHHhcCCEEEec
Q psy15244 885 CVKAGADIVDVA 896 (1427)
Q Consensus 885 Ai~AGad~VD~a 896 (1427)
+.++|+|.|.++
T Consensus 724 ~~~~G~d~i~v~ 735 (1025)
T 1gte_A 724 AKEGGADGVTAT 735 (1025)
T ss_dssp HHHHTCSEEEEC
T ss_pred HHHcCCCEEEEe
Confidence 889999999984
No 473
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=71.58 E-value=33 Score=38.67 Aligned_cols=98 Identities=13% Similarity=0.169 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHcC-CceEEEee-cCCcchHHHHHHHHHHhcC
Q psy15244 816 KYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKYP-NILIHVHT-HDMAGTGVATTLACVKAGA 890 (1427)
Q Consensus 816 ~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~p-~ipi~~H~-Hnd~GlA~An~laAi~AGa 890 (1427)
..|.+-+.++++.+.+.|+|-|.++-|+| .+++++-.++++...+... .+||-.|+ +|+.--++..+..|.++||
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 17 EVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCC
Confidence 68999999999999999999999999988 4788888899998888764 58876654 5677888888889999999
Q ss_pred CEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 891 DIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 891 d~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
|.+=+..--+ . -|+-+.++..++
T Consensus 97 davlv~~P~y-~---~~s~~~l~~~f~ 119 (289)
T 2yxg_A 97 DAVLSITPYY-N---KPTQEGLRKHFG 119 (289)
T ss_dssp SEEEEECCCS-S---CCCHHHHHHHHH
T ss_pred CEEEECCCCC-C---CCCHHHHHHHHH
Confidence 9987664433 2 245566766554
No 474
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=71.46 E-value=76 Score=35.66 Aligned_cols=126 Identities=10% Similarity=-0.011 Sum_probs=62.9
Q ss_pred CCeEEeecCcccCCCCCCCcccCHHHHHHHHHHHHhhcCCccEEeccCCC-----chhhhhhccccChHHHHHHHHHhCC
Q psy15244 657 KHILLTDTTFRDAHQSLLATRVRTYDLKKVSPFVANRFNNLYSLEMWGGA-----VSHTCLKFLKECPWERLAELRELIP 731 (1427)
Q Consensus 657 ~~v~i~DtTlRDG~Qsl~a~r~~t~d~l~ia~~l~~~~~G~~~iE~~gga-----tfd~~~rfl~e~p~erl~~lr~~~p 731 (1427)
+++-+.=-|+||-.+ .+..+.++.+.+ .|+..||+|+.. .++..-.-+.....++++.+.+..
T Consensus 21 ~~~g~~~~s~~~~~~---------~~l~~~l~~aa~--~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~- 88 (305)
T 3obe_A 21 KKMGLQTYSLGQELL---------QDMPNGLNRLAK--AGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDA- 88 (305)
T ss_dssp CCCEEEGGGGTHHHH---------TTHHHHHHHHHH--HTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHT-
T ss_pred CceEEEEEEchhhhh---------cCHHHHHHHHHH--cCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHC-
Confidence 456666667776421 134556666676 699999998531 011000001111334444333322
Q ss_pred CCceeeeecccccccccCC----CcchHHHHHHHHHhcCCCEEEEeccCC-----h----HHHHHHHHHHHHHhcC
Q psy15244 732 NIPFQMILRGNSLVGYSNY----SPAEVGAFCRLASQAGIDIFRVFDPLN-----S----VPNLVKGMDAVQQVTG 794 (1427)
Q Consensus 732 ~~~~qml~Rg~n~vgy~~~----~~nvv~~~v~~a~~~Gid~~rif~~~n-----d----~~~~~~~i~~a~~~G~ 794 (1427)
+..+.++.-+.+.-.+..- ..+..+..++.|.+.|++.+++...-. . ++.+..+.+.+++.|.
T Consensus 89 GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv 164 (305)
T 3obe_A 89 GLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGI 164 (305)
T ss_dssp TCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2333222111100000000 012356678889999999999752211 1 3567778888888887
No 475
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=71.42 E-value=11 Score=42.68 Aligned_cols=77 Identities=9% Similarity=-0.079 Sum_probs=51.4
Q ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCcccc-c----cceEEEcCCCCCcccCCCCHHHHHHHHHhcC
Q psy15244 57 MEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRT-K----VDQAFLVGKGMPPVAAYLNIPEIICIAKNNN 130 (1427)
Q Consensus 57 ~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~~-~----aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~ 130 (1427)
.++|||.| .|.|+..+++.+.+.|+++++++........... + ......+ ..+..+.+.+.++++..+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~Dl~d~~~~~~~~~~~~ 78 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFH------ETDVSDERALARIFDAHP 78 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEE------CCCTTCHHHHHHHHHHSC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEE------EeecCCHHHHHHHHhccC
Confidence 46999999 6999999999999999999888654432211100 0 0011111 123467788888888888
Q ss_pred CCEEEeCCC
Q psy15244 131 VDAIHPGYG 139 (1427)
Q Consensus 131 vDaI~pg~g 139 (1427)
+|.|+-.-+
T Consensus 79 ~d~vih~A~ 87 (341)
T 3enk_A 79 ITAAIHFAA 87 (341)
T ss_dssp CCEEEECCC
T ss_pred CcEEEECcc
Confidence 998886544
No 476
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=71.41 E-value=38 Score=39.57 Aligned_cols=81 Identities=14% Similarity=0.147 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHCCCCEEEEc-------------------cccCcC---CHHHHHHHHHHHHHHcCCceEEE-----eec
Q psy15244 820 NYYEDLAKQLVESGAQVLCLK-------------------DMAGLL---KPTAAKLLIGSFREKYPNILIHV-----HTH 872 (1427)
Q Consensus 820 ~~~~~~a~~l~~~Gad~i~i~-------------------Dt~G~l---~P~~~~~lv~~lr~~~p~ipi~~-----H~H 872 (1427)
+.+.+.|+.+.++|+|.|-|- |-.|.. .+.-+.++|+++|+.+++-||.+ ..+
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~ 240 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTF 240 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence 678888888999999988882 444433 23457788999999996238877 333
Q ss_pred CC---cchHHH----HHHHHHHhcCCEEEeccccC
Q psy15244 873 DM---AGTGVA----TTLACVKAGADIVDVAADSM 900 (1427)
Q Consensus 873 nd---~GlA~A----n~laAi~AGad~VD~av~Gm 900 (1427)
++ .+.... -+-++.++|+|.|+++..++
T Consensus 241 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~ 275 (364)
T 1vyr_A 241 QNVDNGPNEEADALYLIEELAKRGIAYLHMSETDL 275 (364)
T ss_dssp TTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBT
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcc
Confidence 32 233332 34455679999999986443
No 477
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=71.35 E-value=10 Score=41.49 Aligned_cols=71 Identities=15% Similarity=0.211 Sum_probs=47.3
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhc----
Q psy15244 55 KTMEKILIAN-RSEVAIRVARACNEMGIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNN---- 129 (1427)
Q Consensus 55 ~~~kkVLIag-rGeia~riiraa~elGi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~---- 129 (1427)
.|.|++||.| .|.|+..+++.+.+.|+++++++.+.+... ...+.+. ..|.+.+.+++++.
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d--------~~d~~~v~~~~~~~~~~~ 85 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIK--------DSGEEEIKSVIEKINSKS 85 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECS--------CSSHHHHHHHHHHHHTTT
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEE--------eCCHHHHHHHHHHHHHHc
Confidence 4678999999 678999999999999999888876654322 2233321 23445555554442
Q ss_pred -CCCEEEeCCC
Q psy15244 130 -NVDAIHPGYG 139 (1427)
Q Consensus 130 -~vDaI~pg~g 139 (1427)
++|.++-.-|
T Consensus 86 g~iD~li~~Ag 96 (251)
T 3orf_A 86 IKVDTFVCAAG 96 (251)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEECCc
Confidence 6788887655
No 478
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=71.31 E-value=35 Score=39.05 Aligned_cols=76 Identities=14% Similarity=0.079 Sum_probs=48.4
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHHH--cCCEEEEEecCCCcc----------Cccccccc---eEEEcCCCCCcccCCCCH
Q psy15244 56 TMEKILIAN-RSEVAIRVARACNE--MGIKSVGIYSEQDKF----------SAHRTKVD---QAFLVGKGMPPVAAYLNI 119 (1427)
Q Consensus 56 ~~kkVLIag-rGeia~riiraa~e--lGi~~vav~s~~d~~----------s~~~~~aD---e~~~i~~~~~~~~~yldi 119 (1427)
++++|||.| .|.|+..+++.+.+ .|+++++++...... ........ +.+. .+..+.
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~Dl~d~ 80 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIA--------ADINNP 80 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEE--------CCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEE--------CCCCCH
Confidence 357999998 69999999999999 999999887543200 00001111 1222 123556
Q ss_pred HHHHHHHHhcCCCEEEeCCCc
Q psy15244 120 PEIICIAKNNNVDAIHPGYGF 140 (1427)
Q Consensus 120 ~~Ii~ia~~~~vDaI~pg~gf 140 (1427)
+.+.++ ...++|.|+-.-+.
T Consensus 81 ~~~~~~-~~~~~D~vih~A~~ 100 (362)
T 3sxp_A 81 LDLRRL-EKLHFDYLFHQAAV 100 (362)
T ss_dssp HHHHHH-TTSCCSEEEECCCC
T ss_pred HHHHHh-hccCCCEEEECCcc
Confidence 666665 45689999876553
No 479
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=71.24 E-value=27 Score=41.35 Aligned_cols=113 Identities=19% Similarity=0.202 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHh-cCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q psy15244 757 AFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQV-TGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQ 835 (1427)
Q Consensus 757 ~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~-G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad 835 (1427)
+.++.+.+.|+|+|-+-.+..+-..+...++.+++. +. .+-+..+.+. +.++.+.++|||
T Consensus 147 e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i---~Vi~g~V~t~----------------e~A~~a~~aGAD 207 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNI---DVIVGNVVTE----------------EATKELIENGAD 207 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCC---EEEEEEECSH----------------HHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCC---eEEEeecCCH----------------HHHHHHHHcCCC
Q ss_pred EEEE----------ccccCcCCHHHHHHHHHHHHHHc--CCceEEEeecCCcchHHHHHHHHHHhcCCEE
Q psy15244 836 VLCL----------KDMAGLLKPTAAKLLIGSFREKY--PNILIHVHTHDMAGTGVATTLACVKAGADIV 893 (1427)
Q Consensus 836 ~i~i----------~Dt~G~l~P~~~~~lv~~lr~~~--p~ipi~~H~Hnd~GlA~An~laAi~AGad~V 893 (1427)
.|.+ .+..|...|.- .++..+++.. .++||-.-.=-..+-.++.++++ ||+.|
T Consensus 208 ~I~vG~g~Gs~~~tr~~~g~g~p~~--~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalal---GAd~V 272 (400)
T 3ffs_A 208 GIKVGIGPGSICTTRIVAGVGVPQI--TAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV---GASSV 272 (400)
T ss_dssp EEEECC---------CCSCBCCCHH--HHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTT---TCSEE
T ss_pred EEEEeCCCCcCcccccccccchhHH--HHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHc---CCCEE
No 480
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=71.22 E-value=37 Score=39.17 Aligned_cols=116 Identities=14% Similarity=0.213 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCC-------CCCC----------CCC-------HHHHHHHHHHHHHCCC
Q psy15244 779 VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTN-------PNKK----------KYS-------LNYYEDLAKQLVESGA 834 (1427)
Q Consensus 779 ~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~-------p~~~----------~~~-------~~~~~~~a~~l~~~Ga 834 (1427)
++.+++.++.+++.|. .+..-|...|-.+. |.+- ..+ .+.|.+.|+.+.++|.
T Consensus 82 ~~~~~~~~~~vh~~g~---~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGf 158 (338)
T 1z41_A 82 IEGFAKLTEQVKEQGS---KIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGF 158 (338)
T ss_dssp HHHHHHHHHHHHHTTC---EEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCC---EEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4467777888888887 55555554431111 1100 011 2567888889999999
Q ss_pred CEEEEcc-------------------ccCcC---CHHHHHHHHHHHHHHcCCceEEEee------cC--CcchHHHHHHH
Q psy15244 835 QVLCLKD-------------------MAGLL---KPTAAKLLIGSFREKYPNILIHVHT------HD--MAGTGVATTLA 884 (1427)
Q Consensus 835 d~i~i~D-------------------t~G~l---~P~~~~~lv~~lr~~~p~ipi~~H~------Hn--d~GlA~An~la 884 (1427)
|.|-|-= -.|.. .+.-+.++|+++|+++ +.||.+-. |. +.-.++.-+.+
T Consensus 159 DgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~~g~~~~~~~~~a~~ 237 (338)
T 1z41_A 159 DVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTDKGLDIADHIGFAKW 237 (338)
T ss_dssp SEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCSTTSCCHHHHHHHHHH
T ss_pred CEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCCCCCCHHHHHHHHHH
Confidence 9887642 22322 2456789999999998 88887764 21 12223334445
Q ss_pred HHHhcCCEEEeccc
Q psy15244 885 CVKAGADIVDVAAD 898 (1427)
Q Consensus 885 Ai~AGad~VD~av~ 898 (1427)
..++|+|.|+++-.
T Consensus 238 l~~~Gvd~i~v~~~ 251 (338)
T 1z41_A 238 MKEQGVDLIDCSSG 251 (338)
T ss_dssp HHHTTCCEEEEECC
T ss_pred HHHcCCCEEEEecC
Confidence 55799999999753
No 481
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=71.21 E-value=29 Score=42.65 Aligned_cols=108 Identities=11% Similarity=0.137 Sum_probs=70.0
Q ss_pred EEEEEEEeeccCCCCCCCCC--CHHHHHHHHHHHHHCC-----CCEEEEcc--c----cCcCCHHHHHHH---HHHHHH-
Q psy15244 798 IVEATICYAGDLTNPNKKKY--SLNYYEDLAKQLVESG-----AQVLCLKD--M----AGLLKPTAAKLL---IGSFRE- 860 (1427)
Q Consensus 798 ~v~~~i~~t~d~~~p~~~~~--~~~~~~~~a~~l~~~G-----ad~i~i~D--t----~G~l~P~~~~~l---v~~lr~- 860 (1427)
.+.+-+..|-| +--|.++| +.+..++.++++.+.| ||+|-|.= | ..+-..+++.++ |+++++
T Consensus 226 ~iMGIlNvTPD-SFsDGG~~~~~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~ 304 (545)
T 2bmb_A 226 YIMAIFNATPD-SFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRES 304 (545)
T ss_dssp EEEEEEECSCS-STTTTTTTTTCHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEEeCCCC-CCcCCCcCcCCHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 56677777765 22245566 7999999999999999 99988762 2 112223555555 555554
Q ss_pred ---HcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEeccccCCCCCCCCcHHHHHHH
Q psy15244 861 ---KYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAADSMSGICSQPAMGTIVSC 915 (1427)
Q Consensus 861 ---~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av~GmG~~tgn~~lE~vv~~ 915 (1427)
..+++||.+-+=+ ...+.+|+++||++|+--..+ .+-|.+-.+++.
T Consensus 305 ~~~~~~~vpISIDT~~-----a~VaeaAl~aGadIINDVsg~----~~d~~m~~vva~ 353 (545)
T 2bmb_A 305 TELPQDKVILSIDTYR-----SNVAKEAIKVGVDIINDISGG----LFDSNMFAVIAE 353 (545)
T ss_dssp SSSCGGGEEEEEECCC-----HHHHHHHHHTTCCEEEETTTT----SSCTTHHHHHHT
T ss_pred ccccCCCCeEEEeCCc-----HHHHHHHHHcCCCEEEeCCCC----cCChHHHHHHHH
Confidence 1247899985443 345578999999999743322 235666555543
No 482
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=71.20 E-value=32 Score=38.89 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHcC-CceEEEee-cCCcchHHHHHHHHHHhcC
Q psy15244 816 KYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKYP-NILIHVHT-HDMAGTGVATTLACVKAGA 890 (1427)
Q Consensus 816 ~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~p-~ipi~~H~-Hnd~GlA~An~laAi~AGa 890 (1427)
..|.+-+.++++.+.+.|+|-|.++-|+| .+++++-.++++...+... .+||-.|+ +|+.--++..+..|.++||
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Ga 96 (294)
T 2ehh_A 17 EVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGA 96 (294)
T ss_dssp EECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 68999999999999999999999999988 6788888899998888764 58877665 5677788888889999999
Q ss_pred CEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 891 DIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 891 d~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
|.+=+..--+ . .|+-+.++..++
T Consensus 97 davlv~~P~y-~---~~s~~~l~~~f~ 119 (294)
T 2ehh_A 97 DGALVVVPYY-N---KPTQRGLYEHFK 119 (294)
T ss_dssp SEEEEECCCS-S---CCCHHHHHHHHH
T ss_pred CEEEECCCCC-C---CCCHHHHHHHHH
Confidence 9987664433 2 245566666554
No 483
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=71.20 E-value=25 Score=40.17 Aligned_cols=99 Identities=15% Similarity=0.129 Sum_probs=77.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHcC-CceEEEeecCCcchHHHHHHHHHHhcC
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKYP-NILIHVHTHDMAGTGVATTLACVKAGA 890 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~GlA~An~laAi~AGa 890 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+| .+++++-.++++...+... .+||-.|+=.+.--++..+..|.++||
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Ga 107 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGA 107 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999999988 6888888999999888763 688877765555667777888999999
Q ss_pred CEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 891 DIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 891 d~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
|.+=+..-.+ . -|+-+.++..++
T Consensus 108 davlv~~P~y-~---~~s~~~l~~~f~ 130 (314)
T 3d0c_A 108 DCVMIHQPVH-P---YITDAGAVEYYR 130 (314)
T ss_dssp SEEEECCCCC-S---CCCHHHHHHHHH
T ss_pred CEEEECCCCC-C---CCCHHHHHHHHH
Confidence 9986664433 2 244566665554
No 484
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=71.20 E-value=39 Score=36.19 Aligned_cols=171 Identities=12% Similarity=0.134 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCcchHHHH
Q psy15244 679 RTYDLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSPAEVGAF 758 (1427)
Q Consensus 679 ~t~d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~nvv~~~ 758 (1427)
+.++-+++++.+.. .+..++++-+ . |+...| +-++.|++..|+.++-.=+.= ...|. .+
T Consensus 14 ~~~~~~~~~~~~~~---~v~~~kv~~~-~------f~~~G~-~~i~~l~~~~p~~~v~lD~kl------~dip~----t~ 72 (216)
T 1q6o_A 14 TMDSAYETTRLIAE---EVDIIEVGTI-L------CVGEGV-RAVRDLKALYPHKIVLADAKI------ADAGK----IL 72 (216)
T ss_dssp SHHHHHHHHHHHGG---GCSEEEECHH-H------HHHHCT-HHHHHHHHHCTTSEEEEEEEE------CSCHH----HH
T ss_pred CHHHHHHHHHHhcc---cCCEEEECHH-H------HHHhCH-HHHHHHHHhCCCCeEEEEEEe------cccHH----HH
Confidence 44566667666654 4566787532 1 233333 457888888776653321111 11122 23
Q ss_pred HHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q psy15244 759 CRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQVLC 838 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~ 838 (1427)
++.+.+.|.|.+.+-.... .+.++.+++.+++.|. .+-..+ .+ . .+ ..-++.+.+.|.+.+.
T Consensus 73 ~~~~~~~Gad~itvh~~~g-~~~l~~~~~~~~~~g~---~~~~~l-l~-----~----~t----~~~~~~l~~~~~~~~v 134 (216)
T 1q6o_A 73 SRMCFEANADWVTVICCAD-INTAKGALDVAKEFNG---DVQIEL-TG-----Y----WT----WEQAQQWRDAGIGQVV 134 (216)
T ss_dssp HHHHHHTTCSEEEEETTSC-HHHHHHHHHHHHHTTC---EEEEEE-CS-----C----CC----HHHHHHHHHTTCCEEE
T ss_pred HHHHHhCCCCEEEEeccCC-HHHHHHHHHHHHHcCC---Cceeee-ee-----C----CC----hhhHHHHHhcCcHHHH
Confidence 5577789999988876554 3457788888998887 432211 10 1 11 1123445556777776
Q ss_pred E---ccc--cCcC-CHHHHHHHHHHHHHHcC-CceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 839 L---KDM--AGLL-KPTAAKLLIGSFREKYP-NILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 839 i---~Dt--~G~l-~P~~~~~lv~~lr~~~p-~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
+ .++ .|.. .|..+.. +|+..+ +.||.+=. |....|.-.++++|||.|=+.
T Consensus 135 l~~a~~~~~~G~~g~~~~i~~----lr~~~~~~~~i~v~G----GI~~~~~~~~~~aGad~ivvG 191 (216)
T 1q6o_A 135 YHRSRDAQAAGVAWGEADITA----IKRLSDMGFKVTVTG----GLALEDLPLFKGIPIHVFIAG 191 (216)
T ss_dssp EECCHHHHHTTCCCCHHHHHH----HHHHHHTTCEEEEES----SCCGGGGGGGTTSCCSEEEES
T ss_pred HHHHHHHHhcCCCCCHHHHHH----HHHhcCCCCcEEEEC----CcChhhHHHHHHcCCCEEEEe
Confidence 6 333 3433 3555544 444332 55666533 333445678889999988553
No 485
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=71.08 E-value=11 Score=41.46 Aligned_cols=115 Identities=10% Similarity=-0.025 Sum_probs=70.2
Q ss_pred HHHHHHHHHhcCCCEEEEe-ccCC----hHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCC--CCCHHHHHHHHH
Q psy15244 755 VGAFCRLASQAGIDIFRVF-DPLN----SVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKK--KYSLNYYEDLAK 827 (1427)
Q Consensus 755 v~~~v~~a~~~Gid~~rif-~~~n----d~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~--~~~~~~~~~~a~ 827 (1427)
..+.++.+++.|++.|.++ ..-. +-..++...+.+++.|+ .+.. ++...+|.+++.. ....+++.+.++
T Consensus 16 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 91 (278)
T 1i60_A 16 LKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHI---KPLA-LNALVFFNNRDEKGHNEIITEFKGMME 91 (278)
T ss_dssp HHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSC---EEEE-EEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCC---Ceee-eccccccccCCHHHHHHHHHHHHHHHH
Confidence 5667899999999999998 3210 00234455567778888 5442 2333245433211 123678888888
Q ss_pred HHHHCCCCEEEEccccCcC----C-HHHHHHHHHHHHHHc-----CCceEEEeecCCc
Q psy15244 828 QLVESGAQVLCLKDMAGLL----K-PTAAKLLIGSFREKY-----PNILIHVHTHDMA 875 (1427)
Q Consensus 828 ~l~~~Gad~i~i~Dt~G~l----~-P~~~~~lv~~lr~~~-----p~ipi~~H~Hnd~ 875 (1427)
.+.++|+..|.+. .|.. . ......++..|++.. -++.|.+|.|+..
T Consensus 92 ~a~~lG~~~v~~~--~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~ 147 (278)
T 1i60_A 92 TCKTLGVKYVVAV--PLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHP 147 (278)
T ss_dssp HHHHHTCCEEEEE--CCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCT
T ss_pred HHHHcCCCEEEEe--cCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCc
Confidence 8999999988873 3332 2 233344444444321 1789999999865
No 486
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=71.08 E-value=10 Score=46.21 Aligned_cols=69 Identities=25% Similarity=0.298 Sum_probs=50.7
Q ss_pred HHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEec
Q psy15244 822 YEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 822 ~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~a 896 (1427)
..+.++.+.++|+|.|.+ |+++. .+....+++..+++.+|++|+-.-.=. ....+.+++++||+.|+++
T Consensus 234 ~~~~a~~l~~~G~d~ivi-~~a~g-~~~~~~~~i~~l~~~~p~~pvi~G~v~----t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVI-DTAHG-HSAGVLRKIAEIRAHFPNRTLIAGNIA----TAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHHHHHTCSEEEE-CCSCT-TCHHHHHHHHHHHHHCSSSCEEEEEEC----SHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCeEEE-eeecC-cchhHHHHHHHHHHHCCCCcEeCCCcc----CHHHHHHHHHcCCCEEEEC
Confidence 456688888999999885 45553 455677889999999988887632211 2355668889999999884
No 487
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=71.06 E-value=56 Score=35.51 Aligned_cols=186 Identities=10% Similarity=0.030 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhcCCccEEeccCCCchhhhhhccccChHHHHHHHHHhCCCCceeeeecccccccccCCCc--------c
Q psy15244 682 DLKKVSPFVANRFNNLYSLEMWGGAVSHTCLKFLKECPWERLAELRELIPNIPFQMILRGNSLVGYSNYSP--------A 753 (1427)
Q Consensus 682 d~l~ia~~l~~~~~G~~~iE~~ggatfd~~~rfl~e~p~erl~~lr~~~p~~~~qml~Rg~n~vgy~~~~~--------n 753 (1427)
+....++.+.+ .|++.||+| ...+.+..+++++.+.+.. +..+.++.-+.+..+ ++ +
T Consensus 19 ~~~~~l~~~~~--~G~~~vEl~--------~~~~~~~~~~~~~~~l~~~-gl~~~~~~~~~~~~~----~d~~~r~~~~~ 83 (275)
T 3qc0_A 19 GFAEAVDICLK--HGITAIAPW--------RDQVAAIGLGEAGRIVRAN-GLKLTGLCRGGFFPA----PDASGREKAID 83 (275)
T ss_dssp CHHHHHHHHHH--TTCCEEECB--------HHHHHHHCHHHHHHHHHHH-TCEESCEEEEECCCC----SSHHHHHHHHH
T ss_pred CHHHHHHHHHH--cCCCEEEec--------cccccccCHHHHHHHHHHc-CCceEEeecCCCcCC----CCHHHHHHHHH
Q ss_pred hHHHHHHHHHhcCCCEEEEeccCCh-------------HHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCC-------CC
Q psy15244 754 EVGAFCRLASQAGIDIFRVFDPLNS-------------VPNLVKGMDAVQQVTGGSTIVEATICYAGDLTN-------PN 813 (1427)
Q Consensus 754 vv~~~v~~a~~~Gid~~rif~~~nd-------------~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~-------p~ 813 (1427)
..+..++.|.+.|++.+++...... ++.+....+.+++.|. .+++- + +.
T Consensus 84 ~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-------~l~lE----~~~~~~~~~~ 152 (275)
T 3qc0_A 84 DNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGV-------PLAIE----PLHPMYAADR 152 (275)
T ss_dssp HHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTC-------CEEEC----CCCGGGTTTT
T ss_pred HHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCC-------EEEEe----ECCCcccCCc
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcC-CceEEEeecC---------CcchHHHHHH
Q psy15244 814 KKKYSLNYYEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYP-NILIHVHTHD---------MAGTGVATTL 883 (1427)
Q Consensus 814 ~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p-~ipi~~H~Hn---------d~GlA~An~l 883 (1427)
..-.+.+.+.++++.+-. ..=..-|+.=+.. . .+....+++..| +--.++|.+| .
T Consensus 153 ~~~~~~~~~~~l~~~~~~---~vg~~~D~~h~~~--~-~d~~~~l~~~~~~~~i~~vH~~D~~~~~~~~~~--------- 217 (275)
T 3qc0_A 153 ACVNTLGQALDICETLGP---GVGVAIDVYHVWW--D-PDLANQIARAGKMKAILAHHICDWLVPTKDMLT--------- 217 (275)
T ss_dssp BSCCCHHHHHHHHHHHCT---TEEEEEEHHHHTT--C-TTHHHHHHHHHHTTCEEEEEECBCCSSCCCSSS---------
T ss_pred cccCCHHHHHHHHHHhCc---ccEEEEEhhhhee--C-CCHHHHHHHcCccceEEEEEecCCCCCcccccC---------
Q ss_pred HHHHhcCCEEEeccccCCCCCCCCcHHHHHHHHHhCCCC
Q psy15244 884 ACVKAGADIVDVAADSMSGICSQPAMGTIVSCLENTDKR 922 (1427)
Q Consensus 884 aAi~AGad~VD~av~GmG~~tgn~~lE~vv~~L~~~g~~ 922 (1427)
.-.-=+.|.-+...++..|+..|++
T Consensus 218 --------------~r~~~G~G~id~~~~~~~L~~~gy~ 242 (275)
T 3qc0_A 218 --------------DRGMMGDGVIDLKGIRRRIEAAGFH 242 (275)
T ss_dssp --------------BCBCTTSSCCCHHHHHHHHHHTTCC
T ss_pred --------------CCcCCCCCccCHHHHHHHHHHcCCC
No 488
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=71.03 E-value=11 Score=43.12 Aligned_cols=102 Identities=15% Similarity=0.150 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCCCCE-EEEcc-ccCcCCHHHHHHHHHHH
Q psy15244 781 NLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESGAQV-LCLKD-MAGLLKPTAAKLLIGSF 858 (1427)
Q Consensus 781 ~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~Gad~-i~i~D-t~G~l~P~~~~~lv~~l 858 (1427)
++++.++.|++.|+ -+ .+ |. .++.+.+..+++.+++.++.. |-+.- ....+-..-+..++.++
T Consensus 4 ~~~~ll~~A~~~~y---AV-~A--fN---------v~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~a 68 (307)
T 3n9r_A 4 KGNEILLKAHKEGY---GV-GA--FN---------FVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIM 68 (307)
T ss_dssp CHHHHHHHHHHHTC---CE-EE--EE---------CSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCc---eE-EE--Ee---------eCCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHH
Confidence 46777888888887 22 22 22 477888888888888888764 33432 11222234456677777
Q ss_pred HHHcCCceEEEeecCCcchHHHHHHHHHHhcCCE--EEecccc
Q psy15244 859 REKYPNILIHVHTHDMAGTGVATTLACVKAGADI--VDVAADS 899 (1427)
Q Consensus 859 r~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~--VD~av~G 899 (1427)
.+..+++||.+|. |.|........|+++|.+- +|+|-.+
T Consensus 69 a~~~~~VPValHL--DHg~~~e~~~~ai~~GFtSVMiDgS~~p 109 (307)
T 3n9r_A 69 CERYPHIPVALHL--DHGTTFESCEKAVKAGFTSVMIDASHHA 109 (307)
T ss_dssp HHHSTTSCEEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSC
T ss_pred HHhcCCCcEEEEC--CCCCCHHHHHHHHHhCCCcEEEECCCCC
Confidence 7764589988876 2344578889999999884 6666553
No 489
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=71.01 E-value=32 Score=38.07 Aligned_cols=111 Identities=10% Similarity=0.107 Sum_probs=68.0
Q ss_pred HHHHHHhcCCCEEEEeccCC---hHHHHHHHHHHHHHhcCCCcEEEEEEE-ee----cc-------CC--CCCCCCCCHH
Q psy15244 758 FCRLASQAGIDIFRVFDPLN---SVPNLVKGMDAVQQVTGGSTIVEATIC-YA----GD-------LT--NPNKKKYSLN 820 (1427)
Q Consensus 758 ~v~~a~~~Gid~~rif~~~n---d~~~~~~~i~~a~~~G~~~~~v~~~i~-~t----~d-------~~--~p~~~~~~~~ 820 (1427)
.++.+++.|.+.|-++..-. +-..++...+.+++.|+ .+....+ +. .| ++ +|..-....+
T Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~ 102 (290)
T 3tva_A 26 HLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGI---QVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVA 102 (290)
T ss_dssp CHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTC---EEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHH
T ss_pred HHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCC---EEEEEeeccCCcccccccccccccCCCCHHHHHHHHH
Confidence 48889999999999986422 23456667778888998 5443211 00 01 11 2211123467
Q ss_pred HHHHHHHHHHHCCCCEEEEccccCcC---CHHHHHHHHHHHHHHc-----CCceEEEeecC
Q psy15244 821 YYEDLAKQLVESGAQVLCLKDMAGLL---KPTAAKLLIGSFREKY-----PNILIHVHTHD 873 (1427)
Q Consensus 821 ~~~~~a~~l~~~Gad~i~i~Dt~G~l---~P~~~~~lv~~lr~~~-----p~ipi~~H~Hn 873 (1427)
++.+.++.+.++|+..|.+. .|.. .......++..|++.. -++.|.+|.|.
T Consensus 103 ~~~~~i~~a~~lG~~~v~~~--~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~ 161 (290)
T 3tva_A 103 EMKEISDFASWVGCPAIGLH--IGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ 161 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEC--CCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEEc--CCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCC
Confidence 88888899999999998873 2321 2334444444444322 17889999883
No 490
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=70.99 E-value=1e+02 Score=35.78 Aligned_cols=123 Identities=20% Similarity=0.165 Sum_probs=82.7
Q ss_pred hcCCCEEEEeccC----------ChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHHCC
Q psy15244 764 QAGIDIFRVFDPL----------NSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVESG 833 (1427)
Q Consensus 764 ~~Gid~~rif~~~----------nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~~G 833 (1427)
+.|+|.|-|-.++ .+.+.+.+.++.+++.-.. -+.+ - ..|+ .+.+.+.++++.+.++|
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~--PV~v--K-----i~p~---~d~~~~~~~a~~~~~~G 220 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPH--SFGV--K-----MPPY---FDFAHFDAAAEILNEFP 220 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCS--CEEE--E-----ECCC---CSHHHHHHHHHHHHTCT
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCC--CeEE--E-----ecCC---CCHHHHHHHHHHHHhCC
Confidence 4689998887763 2567788888888876431 1111 1 1453 46778889999999998
Q ss_pred -CCEEEEcccc---------------------CcCCH----HHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHH
Q psy15244 834 -AQVLCLKDMA---------------------GLLKP----TAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVK 887 (1427)
Q Consensus 834 -ad~i~i~Dt~---------------------G~l~P----~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~ 887 (1427)
+|.|.+-.|. |.+.. ....++|..+++..+++||-.-.-=..+ ..+++++.
T Consensus 221 g~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~---~da~~~l~ 297 (354)
T 4ef8_A 221 KVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTG---EDAFLHVL 297 (354)
T ss_dssp TEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCCSH---HHHHHHHH
T ss_pred CccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcCCH---HHHHHHHH
Confidence 9988764332 21221 3567889999998778998765444343 45566778
Q ss_pred hcCCEEEeccccCC
Q psy15244 888 AGADIVDVAADSMS 901 (1427)
Q Consensus 888 AGad~VD~av~GmG 901 (1427)
+|||.|...-.=+.
T Consensus 298 aGAd~V~vgra~l~ 311 (354)
T 4ef8_A 298 AGASMVQVGTALQE 311 (354)
T ss_dssp HTEEEEEECHHHHH
T ss_pred cCCCEEEEhHHHHH
Confidence 99999987655443
No 491
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=70.78 E-value=30 Score=40.35 Aligned_cols=134 Identities=18% Similarity=0.167 Sum_probs=82.0
Q ss_pred HHHHHH---HHHhcCCCEEEEeccC------------C--------hHH----HHHHHHHHHHHhcCCCcEEEEEEEeec
Q psy15244 755 VGAFCR---LASQAGIDIFRVFDPL------------N--------SVP----NLVKGMDAVQQVTGGSTIVEATICYAG 807 (1427)
Q Consensus 755 v~~~v~---~a~~~Gid~~rif~~~------------n--------d~~----~~~~~i~~a~~~G~~~~~v~~~i~~t~ 807 (1427)
++.|.+ +|.++|.|.|.|-.+- | +++ -+.+.+++++++=.....+.+-|+-.
T Consensus 157 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~- 235 (363)
T 3l5l_A 157 KQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVL- 235 (363)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEE-
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecch-
Confidence 444444 4567899998887542 1 122 35667778877632111243433332
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcccc--Cc----CCHHHHHHHHHHHHHHcCCceEEEeecCCcch-HHH
Q psy15244 808 DLTNPNKKKYSLNYYEDLAKQLVESGAQVLCLKDMA--GL----LKPTAAKLLIGSFREKYPNILIHVHTHDMAGT-GVA 880 (1427)
Q Consensus 808 d~~~p~~~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~--G~----l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~Gl-A~A 880 (1427)
|+. +. +..+.+.+.++++.+.++|+|.|.+.... .. ..|..-.++++.+|+.+ ++||-.=. |. ...
T Consensus 236 ~~~-~~-G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~G----gI~s~e 308 (363)
T 3l5l_A 236 EYD-GR-DEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA-KLPVTSAW----GFGTPQ 308 (363)
T ss_dssp CSS-SC-HHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-TCCEEECS----STTSHH
T ss_pred hcC-CC-CCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc-CCcEEEeC----CCCCHH
Confidence 221 11 11678899999999999999998886521 10 11222346788889888 78876532 22 256
Q ss_pred HHHHHHHhc-CCEEEec
Q psy15244 881 TTLACVKAG-ADIVDVA 896 (1427)
Q Consensus 881 n~laAi~AG-ad~VD~a 896 (1427)
.+.+++++| ||.|-..
T Consensus 309 ~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 309 LAEAALQANQLDLVSVG 325 (363)
T ss_dssp HHHHHHHTTSCSEEECC
T ss_pred HHHHHHHCCCccEEEec
Confidence 778899999 9988543
No 492
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=70.63 E-value=17 Score=44.47 Aligned_cols=70 Identities=19% Similarity=0.271 Sum_probs=52.2
Q ss_pred HHHHHHHHHHCCCCEEEEccccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCcchHHHHHHHHHHhcCCEEEecc
Q psy15244 822 YEDLAKQLVESGAQVLCLKDMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMAGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 822 ~~~~a~~l~~~Gad~i~i~Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~GlA~An~laAi~AGad~VD~av 897 (1427)
..+.++.+.++|+|.|.|-=+.| .|....++++.+|+.+|++||....= .....+..+.++|||.|+++.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G--~~~~~~~~i~~i~~~~~~~pvi~~~v----~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQG--NSVYQIAMVHYIKQKYPHLQVIGGNV----VTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC--CSHHHHHHHHHHHHHCTTCEEEEEEE----CSHHHHHHHHHHTCSEEEECS
T ss_pred hHHHHHHHHHcCCCEEEeeccCC--cchhHHHHHHHHHHhCCCCceEeccc----chHHHHHHHHHcCCCEEEECC
Confidence 45677888899999998832223 45667789999999998999876422 224557788999999999943
No 493
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=70.49 E-value=76 Score=34.29 Aligned_cols=129 Identities=18% Similarity=0.059 Sum_probs=75.2
Q ss_pred cchHHHHHHHHHhcCCCEEEEeccCChHHHHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15244 752 PAEVGAFCRLASQAGIDIFRVFDPLNSVPNLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYYEDLAKQLVE 831 (1427)
Q Consensus 752 ~nvv~~~v~~a~~~Gid~~rif~~~nd~~~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~~~~a~~l~~ 831 (1427)
+..++..++.|.+.|.+.+-+.-. .+..... ..+ +. .+.. .. +.|.. ....+.-..-++.+.+
T Consensus 19 ~~~i~~l~~~a~~~g~~~v~v~~~--~v~~~~~---~l~--~v---~v~~---v~---~~P~g-~~~~~~k~~~~~~A~~ 81 (225)
T 1mzh_A 19 EKEIEEFVLKSEELGIYAVCVNPY--HVKLASS---IAK--KV---KVCC---VI---GFPLG-LNKTSVKVKEAVEAVR 81 (225)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECGG--GHHHHHH---HCS--SS---EEEE---EE---STTTC-CSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCeEEEECHH--HHHHHHH---Hhc--CC---ceee---Ee---cCCCC-ccchhhhHHHHHHHHH
Confidence 445777899999999998765443 3332222 111 33 3221 11 23432 2444555555688889
Q ss_pred CCCCEEEEccccCc---CCHHHHHHHHHHHHHHcCCceEEE--eecC-CcchHHHHHHHHHHhcCCEEEecc
Q psy15244 832 SGAQVLCLKDMAGL---LKPTAAKLLIGSFREKYPNILIHV--HTHD-MAGTGVATTLACVKAGADIVDVAA 897 (1427)
Q Consensus 832 ~Gad~i~i~Dt~G~---l~P~~~~~lv~~lr~~~p~ipi~~--H~Hn-d~GlA~An~laAi~AGad~VD~av 897 (1427)
.|+|.|-+.=-.|. ..+..+.+.++++++..+.+.+=+ .+-+ |.......+..|.++|||.|.++.
T Consensus 82 ~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tst 153 (225)
T 1mzh_A 82 DGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTST 153 (225)
T ss_dssp TTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred cCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECC
Confidence 99999885222233 256778888999999874333322 1111 112234556788899999996655
No 494
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=70.44 E-value=31 Score=38.82 Aligned_cols=196 Identities=10% Similarity=0.058 Sum_probs=104.7
Q ss_pred cCHHHHHHHHHHHHhhcC--CccEEeccCCCchhhhhhccccChHHHHH-HHHH-hCC-CCceeeeeccccccccc--CC
Q psy15244 678 VRTYDLKKVSPFVANRFN--NLYSLEMWGGAVSHTCLKFLKECPWERLA-ELRE-LIP-NIPFQMILRGNSLVGYS--NY 750 (1427)
Q Consensus 678 ~~t~d~l~ia~~l~~~~~--G~~~iE~~ggatfd~~~rfl~e~p~erl~-~lr~-~~p-~~~~qml~Rg~n~vgy~--~~ 750 (1427)
-+.+|+.++++...+ . |+.++-+..+. + ...+ .|.+ -.| ++++.. .+||- ..
T Consensus 45 ~T~~dI~~lc~eA~~--~~~~~aaVCV~p~~--------V-----~~a~~~L~~~gs~~~v~v~t------VigFP~G~~ 103 (281)
T 2a4a_A 45 GTEDDIRELCNESVK--TCPFAAAVCVYPKF--------V-----KFINEKIKQEINPFKPKIAC------VINFPYGTD 103 (281)
T ss_dssp CCHHHHHHHHHHHHS--SSSCCSEEEECGGG--------H-----HHHHHHHHHHSSSCCSEEEE------EESTTTCCS
T ss_pred CCHHHHHHHHHHHHh--ccCCccEEEECHHH--------H-----HHHHHHhhccCCCCCceEEE------EeCCCCCCC
Confidence 467889998888877 5 88888765321 1 1111 2221 112 333332 34442 13
Q ss_pred CcchHHHHHHHHHhcCCCEEEEeccCCh-----HH---HHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCHHHH
Q psy15244 751 SPAEVGAFCRLASQAGIDIFRVFDPLNS-----VP---NLVKGMDAVQQVTGGSTIVEATICYAGDLTNPNKKKYSLNYY 822 (1427)
Q Consensus 751 ~~nvv~~~v~~a~~~Gid~~rif~~~nd-----~~---~~~~~i~~a~~~G~~~~~v~~~i~~t~d~~~p~~~~~~~~~~ 822 (1427)
+..+.-.-++.|++.|.|.+-+...... .+ .+..-|..++++-. +..+-+-|.... -.+.+.+
T Consensus 104 ~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~--------L~d~e~i 174 (281)
T 2a4a_A 104 SMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGE--------LKTEDLI 174 (281)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHH--------HCSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEeccc--------CCcHHHH
Confidence 4444555688999999999988886663 34 45555566665421 113333222220 1455557
Q ss_pred HHHHHHHHHCCCCEEEEc--cccCcCCHHHHHHHHHHHHHH-------cCCceEEEee--cCCcchHHHHHHHHH-HhcC
Q psy15244 823 EDLAKQLVESGAQVLCLK--DMAGLLKPTAAKLLIGSFREK-------YPNILIHVHT--HDMAGTGVATTLACV-KAGA 890 (1427)
Q Consensus 823 ~~~a~~l~~~Gad~i~i~--Dt~G~l~P~~~~~lv~~lr~~-------~p~ipi~~H~--Hnd~GlA~An~laAi-~AGa 890 (1427)
...++.+.++|||.|--. =+.|-++++++.-+.+.+++. -+.++|-.=. + |.--+++-..++. ..|.
T Consensus 175 ~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIr-t~e~al~~i~aga~~lG~ 253 (281)
T 2a4a_A 175 IKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGIS-DLNTASHYILLARRFLSS 253 (281)
T ss_dssp HHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCC-SHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCC-CHHHHHHHHHHhhhhccc
Confidence 788999999999987644 223678888888877777643 2344442211 1 3333333222222 2466
Q ss_pred CEEEeccccCCCCC
Q psy15244 891 DIVDVAADSMSGIC 904 (1427)
Q Consensus 891 d~VD~av~GmG~~t 904 (1427)
+|++-...=+|-..
T Consensus 254 ~w~~~~~~RiGtSs 267 (281)
T 2a4a_A 254 LACHPDNFRIGSSS 267 (281)
T ss_dssp -----CCEEEEESS
T ss_pred cccccCceEEecCc
Confidence 67766555555433
No 495
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=70.42 E-value=38 Score=38.29 Aligned_cols=100 Identities=13% Similarity=0.109 Sum_probs=78.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccCc---CCHHHHHHHHHHHHHHcC-CceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAGL---LKPTAAKLLIGSFREKYP-NILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~---l~P~~~~~lv~~lr~~~p-~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+|= |++++-.++++...+... .+||-.|+ +|+.--++..+..|.++|
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 98 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAG 98 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999885 888999999999988763 57876654 567788888888999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..-.+- . .|+-+.++..++
T Consensus 99 adavlv~~P~y~-~--~~s~~~l~~~f~ 123 (294)
T 3b4u_A 99 ARNILLAPPSYF-K--NVSDDGLFAWFS 123 (294)
T ss_dssp CSEEEECCCCSS-C--SCCHHHHHHHHH
T ss_pred CCEEEEcCCcCC-C--CCCHHHHHHHHH
Confidence 999876644332 1 145566665554
No 496
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=70.42 E-value=17 Score=41.25 Aligned_cols=99 Identities=15% Similarity=0.109 Sum_probs=80.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccCc---CCHHHHHHHHHHHHHHcC-CceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAGL---LKPTAAKLLIGSFREKYP-NILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G~---l~P~~~~~lv~~lr~~~p-~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++-|+|= |+.++-.++++...+... .+||-.|+ +|+.--++..+..|.++|
T Consensus 20 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 99 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLG 99 (300)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 3699999999999999999999999999995 788888899999888763 57877765 688888999999999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..--. .. |+-+.++..++
T Consensus 100 adavlv~~P~y-~~---~~~~~l~~~f~ 123 (300)
T 3eb2_A 100 ADGILAILEAY-FP---LKDAQIESYFR 123 (300)
T ss_dssp CSEEEEEECCS-SC---CCHHHHHHHHH
T ss_pred CCEEEEcCCCC-CC---CCHHHHHHHHH
Confidence 99986644333 22 45566766665
No 497
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=70.41 E-value=41 Score=38.22 Aligned_cols=99 Identities=20% Similarity=0.221 Sum_probs=79.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccccC---cCCHHHHHHHHHHHHHHcC-CceEEEee-cCCcchHHHHHHHHHHhc
Q psy15244 815 KKYSLNYYEDLAKQLVESGAQVLCLKDMAG---LLKPTAAKLLIGSFREKYP-NILIHVHT-HDMAGTGVATTLACVKAG 889 (1427)
Q Consensus 815 ~~~~~~~~~~~a~~l~~~Gad~i~i~Dt~G---~l~P~~~~~lv~~lr~~~p-~ipi~~H~-Hnd~GlA~An~laAi~AG 889 (1427)
...|.+-+.++++.+.+.|+|-|.++=|+| .|++++=.++++...+... .+||-.|+ +|+.--++..+..|.++|
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~G 111 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAG 111 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcC
Confidence 378999999999999999999999999988 6788888899998888763 58876654 567788888889999999
Q ss_pred CCEEEeccccCCCCCCCCcHHHHHHHHH
Q psy15244 890 ADIVDVAADSMSGICSQPAMGTIVSCLE 917 (1427)
Q Consensus 890 ad~VD~av~GmG~~tgn~~lE~vv~~L~ 917 (1427)
||.+=+..--. ..|+-+.++..++
T Consensus 112 adavlv~~P~y----~~~~~~~l~~~f~ 135 (304)
T 3cpr_A 112 ADGLLVVTPYY----SKPSQEGLLAHFG 135 (304)
T ss_dssp CSEEEEECCCS----SCCCHHHHHHHHH
T ss_pred CCEEEECCCCC----CCCCHHHHHHHHH
Confidence 99987664433 2245677776655
No 498
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=70.40 E-value=39 Score=38.08 Aligned_cols=122 Identities=19% Similarity=0.095 Sum_probs=74.4
Q ss_pred HHHHHhcCCCEEEEeccCC------hHHHHHHHHHHHHHhcCCCcEEEEEEEe-eccCCCCCCCCCCHHHH---HHHHHH
Q psy15244 759 CRLASQAGIDIFRVFDPLN------SVPNLVKGMDAVQQVTGGSTIVEATICY-AGDLTNPNKKKYSLNYY---EDLAKQ 828 (1427)
Q Consensus 759 v~~a~~~Gid~~rif~~~n------d~~~~~~~i~~a~~~G~~~~~v~~~i~~-t~d~~~p~~~~~~~~~~---~~~a~~ 828 (1427)
+..|.+.|.|++.+.+.+. ....++.+.+. ... -+.+.|.- .+|| .|+.+.+ .+-++.
T Consensus 52 a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~---~~i---pV~vMIRPRgGdF------~Ys~~E~~~M~~dI~~ 119 (287)
T 3iwp_A 52 AVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQS---VQI---PVFVMIRPRGGDF------LYSDREIEVMKADIRL 119 (287)
T ss_dssp HHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTT---CCS---CEEEECCSSSSCS------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHh---cCC---CeEEEEecCCCCc------ccCHHHHHHHHHHHHH
Confidence 7889999999999998743 23333333221 223 23222211 1122 4665444 455667
Q ss_pred HHHCCCCEEEEc--cccCcCCHHHHHHHHHHHHHHcCCceEEEeecCCc-chHHHHHHHHHHhcCCEEEec
Q psy15244 829 LVESGAQVLCLK--DMAGLLKPTAAKLLIGSFREKYPNILIHVHTHDMA-GTGVATTLACVKAGADIVDVA 896 (1427)
Q Consensus 829 l~~~Gad~i~i~--Dt~G~l~P~~~~~lv~~lr~~~p~ipi~~H~Hnd~-GlA~An~laAi~AGad~VD~a 896 (1427)
+.++|||-|.+- +.-|.+....+.+|++..+ .+++.||---|. --.....-..++.|++.|=+|
T Consensus 120 ~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~----~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTS 186 (287)
T 3iwp_A 120 AKLYGADGLVFGALTEDGHIDKELCMSLMAICR----PLPVTFHRAFDMVHDPMAALETLLTLGFERVLTS 186 (287)
T ss_dssp HHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT----TSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEEC
T ss_pred HHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC----CCcEEEECchhccCCHHHHHHHHHHcCCCEEECC
Confidence 778999988875 3446666678888877653 478888877332 123444445556699998773
No 499
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=70.37 E-value=15 Score=39.41 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCEEEEEecC
Q psy15244 55 KTMEKILIANRSEVAIRVARACNEMGIKSVGIYSE 89 (1427)
Q Consensus 55 ~~~kkVLIagrGeia~riiraa~elGi~~vav~s~ 89 (1427)
+.++++||+|.|.-+..+++.+++.|++++++..+
T Consensus 10 ~~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd 44 (220)
T 4ea9_A 10 LAIGGVVIIGGGGHAKVVIESLRACGETVAAIVDA 44 (220)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred cCCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeC
Confidence 45679999999999999999999999998877554
No 500
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=70.14 E-value=7.9 Score=43.36 Aligned_cols=73 Identities=10% Similarity=0.060 Sum_probs=50.3
Q ss_pred CCEEEEEc-CCHHHHHHHHHHHHc--CCEEEEEecCCCccCccccccceEEEcCCCCCcccCCCCHHHHHHHHHhcCCCE
Q psy15244 57 MEKILIAN-RSEVAIRVARACNEM--GIKSVGIYSEQDKFSAHRTKVDQAFLVGKGMPPVAAYLNIPEIICIAKNNNVDA 133 (1427)
Q Consensus 57 ~kkVLIag-rGeia~riiraa~el--Gi~~vav~s~~d~~s~~~~~aDe~~~i~~~~~~~~~yldi~~Ii~ia~~~~vDa 133 (1427)
.++|||.| .|.++..+++.+.+. |++++++.......... .. -+.+. .+..+.+.+.++.++.++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~-~~-~~~~~--------~D~~d~~~~~~~~~~~~~d~ 71 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVV-NS-GPFEV--------VNALDFNQIEHLVEVHKITD 71 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHH-HS-SCEEE--------CCTTCHHHHHHHHHHTTCCE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccccc-CC-CceEE--------ecCCCHHHHHHHHhhcCCCE
Confidence 46899999 499999999999998 89988886544321100 00 01222 23456788888888778999
Q ss_pred EEeCCC
Q psy15244 134 IHPGYG 139 (1427)
Q Consensus 134 I~pg~g 139 (1427)
|+-.-+
T Consensus 72 vih~a~ 77 (312)
T 2yy7_A 72 IYLMAA 77 (312)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886654
Done!