Query psy15247
Match_columns 203
No_of_seqs 117 out of 1086
Neff 7.4
Searched_HMMs 29240
Date Sat Aug 17 01:08:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15247.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15247hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gxw_A Adenosine deaminase; am 100.0 6.3E-48 2.2E-52 341.4 20.2 189 7-201 87-358 (380)
2 3iar_A Adenosine deaminase; pu 100.0 2.3E-44 8E-49 317.3 22.0 198 4-202 66-350 (367)
3 3rys_A Adenosine deaminase 1; 100.0 2.1E-44 7.1E-49 315.2 21.4 188 6-201 71-337 (343)
4 3lgd_A Adenosine deaminase CEC 100.0 1.1E-40 3.8E-45 303.7 18.9 190 6-201 190-476 (508)
5 3pao_A Adenosine deaminase; st 100.0 4.8E-41 1.7E-45 292.1 14.5 174 5-187 68-320 (326)
6 2pgf_A Adenosine deaminase; me 100.0 2.8E-34 9.7E-39 253.2 19.2 181 8-196 107-370 (371)
7 2a3l_A AMP deaminase, AMPD; at 99.9 1.9E-28 6.4E-33 229.8 5.4 174 10-197 349-654 (701)
8 3ls9_A Triazine hydrolase; atr 97.3 0.016 5.5E-07 50.3 17.2 57 129-185 308-378 (456)
9 4dyk_A Amidohydrolase; adenosi 97.2 0.0071 2.4E-07 52.7 14.0 58 129-186 292-361 (451)
10 3h4u_A Amidohydrolase; signatu 97.0 0.019 6.6E-07 50.4 14.7 57 129-185 330-397 (479)
11 4f0r_A 5-methylthioadenosine/S 96.9 0.046 1.6E-06 47.4 15.9 176 9-186 103-359 (447)
12 3lnp_A Amidohydrolase family p 96.8 0.061 2.1E-06 46.9 16.4 176 9-186 125-386 (468)
13 4dzh_A Amidohydrolase; adenosi 96.4 0.11 3.9E-06 45.6 15.5 175 10-186 113-368 (472)
14 3mdu_A N-formimino-L-glutamate 96.3 0.037 1.3E-06 48.6 11.5 29 10-38 93-121 (453)
15 3ooq_A Amidohydrolase; structu 94.8 0.024 8.1E-07 48.7 4.4 58 129-186 289-348 (396)
16 2q09_A Imidazolonepropionase; 94.2 0.11 3.7E-06 44.7 7.2 56 131-186 303-362 (416)
17 3gnh_A L-lysine, L-arginine ca 94.2 0.043 1.5E-06 46.7 4.6 56 131-186 304-360 (403)
18 2qs8_A XAA-Pro dipeptidase; am 94.1 0.042 1.5E-06 47.2 4.3 56 131-186 314-370 (418)
19 4aql_A Guanine deaminase; hydr 92.3 0.37 1.3E-05 42.5 7.8 58 129-186 335-406 (476)
20 4f0l_A Amidohydrolase; ssgcid, 92.1 2.4 8.3E-05 36.6 12.6 52 131-184 315-382 (458)
21 3be7_A Zn-dependent arginine c 91.9 0.14 4.7E-06 43.7 4.3 55 131-185 303-358 (408)
22 2bb0_A Imidazolonepropionase; 91.4 0.5 1.7E-05 40.4 7.3 56 131-186 310-369 (421)
23 2qt3_A N-isopropylammelide iso 91.3 0.39 1.3E-05 40.6 6.5 55 131-185 289-354 (403)
24 3feq_A Putative amidohydrolase 91.2 0.086 3E-06 45.0 2.2 55 131-186 309-364 (423)
25 2r8c_A Putative amidohydrolase 90.7 0.15 5.2E-06 43.9 3.3 55 131-186 312-367 (426)
26 2puz_A Imidazolonepropionase; 90.2 0.55 1.9E-05 40.1 6.4 56 131-186 315-374 (419)
27 2i9u_A Cytosine/guanine deamin 88.8 0.64 2.2E-05 40.0 5.8 52 131-182 306-371 (439)
28 2imr_A Hypothetical protein DR 88.3 0.78 2.7E-05 39.4 6.0 55 131-185 340-398 (420)
29 2p9b_A Possible prolidase; pro 87.8 0.87 3E-05 39.5 6.0 56 131-186 331-390 (458)
30 1p1m_A Hypothetical protein TM 87.0 1.3 4.6E-05 37.5 6.7 55 131-185 265-328 (406)
31 2vun_A Enamidase; nicotinate d 86.8 0.72 2.5E-05 38.8 4.8 54 131-184 260-320 (386)
32 1ra0_A Cytosine deaminase; alp 84.2 0.94 3.2E-05 38.8 4.3 55 131-185 303-368 (430)
33 2ood_A BLR3880 protein; PSI-II 81.2 2.8 9.6E-05 36.6 6.3 56 131-186 310-393 (475)
34 2paj_A Putative cytosine/guani 80.6 1.2 4.2E-05 38.8 3.7 55 131-185 322-401 (492)
35 3mtw_A L-arginine carboxypepti 78.2 2.5 8.4E-05 33.8 4.6 56 131-186 304-360 (403)
36 1v77_A PH1877P, hypothetical p 59.3 14 0.00047 29.0 5.0 45 131-175 154-199 (212)
37 2ztj_A Homocitrate synthase; ( 56.2 92 0.0031 26.6 10.2 88 22-117 80-170 (382)
38 1olt_A Oxygen-independent copr 55.4 1E+02 0.0035 26.7 10.6 61 52-116 184-245 (457)
39 3nzt_A Glutamate--cysteine lig 48.6 16 0.00054 33.2 4.1 28 150-177 463-491 (525)
40 1qv9_A F420-dependent methylen 47.5 32 0.0011 28.2 5.4 112 52-182 12-148 (283)
41 2ibo_A Hypothetical protein SP 44.8 76 0.0026 22.1 7.1 51 11-72 15-65 (104)
42 2h3h_A Sugar ABC transporter, 44.5 1.1E+02 0.0039 24.0 8.7 77 59-147 14-93 (313)
43 1vk8_A Hypothetical protein TM 43.6 81 0.0028 22.1 6.5 63 10-84 27-89 (106)
44 3qy7_A Tyrosine-protein phosph 43.0 45 0.0015 26.9 5.8 41 131-171 180-223 (262)
45 2gwn_A Dihydroorotase; zinc-bi 40.3 26 0.00089 30.1 4.2 53 131-184 302-374 (452)
46 2cw6_A Hydroxymethylglutaryl-C 39.7 1.5E+02 0.0052 24.0 10.4 154 22-182 86-283 (298)
47 1ydn_A Hydroxymethylglutaryl-C 39.4 1.5E+02 0.0052 23.9 10.1 149 21-176 84-276 (295)
48 4f0h_A Ribulose bisphosphate c 38.8 1.2E+02 0.0042 27.1 8.3 86 9-112 189-277 (493)
49 3v7p_A Amidohydrolase family p 38.0 60 0.002 27.6 6.1 31 131-163 294-325 (427)
50 4gxh_A Pyrrolidone-carboxylate 37.5 1.5E+02 0.0051 23.3 8.2 55 92-146 49-139 (216)
51 3m9w_A D-xylose-binding peripl 36.5 1.5E+02 0.0053 23.2 8.5 74 59-145 16-92 (313)
52 3icj_A Uncharacterized metal-d 36.3 41 0.0014 30.1 4.9 55 129-185 418-481 (534)
53 3lmz_A Putative sugar isomeras 35.9 1.5E+02 0.0051 22.8 9.0 77 18-110 32-108 (257)
54 1u7k_A GAG polyprotein; capsid 35.1 50 0.0017 24.2 4.3 51 145-200 26-79 (131)
55 2xzm_K RPS14E; ribosome, trans 35.0 1.4E+02 0.0046 22.4 6.9 65 9-86 69-134 (151)
56 3mhs_B Protein SUS1; multi-pro 34.5 69 0.0023 22.1 4.8 36 164-200 36-89 (96)
57 2kl8_A OR15; structural genomi 34.5 92 0.0032 20.0 7.8 59 10-83 11-77 (85)
58 1ydo_A HMG-COA lyase; TIM-barr 33.2 2E+02 0.0069 23.6 9.8 154 22-181 87-283 (307)
59 1xrt_A Dihydroorotase, dhoase; 33.1 38 0.0013 29.1 4.1 53 131-184 336-407 (467)
60 3bbl_A Regulatory protein of L 33.0 1.6E+02 0.0055 22.8 7.6 51 59-112 22-72 (287)
61 3ble_A Citramalate synthase fr 32.2 1.3E+02 0.0046 25.0 7.3 90 21-117 101-195 (337)
62 2ogj_A Dihydroorotase; TIM bar 32.0 36 0.0012 28.6 3.7 54 131-185 276-336 (417)
63 1nfg_A D-hydantoinase; TIM bar 31.9 45 0.0015 28.2 4.3 53 131-184 299-375 (457)
64 3brq_A HTH-type transcriptiona 31.5 1.8E+02 0.006 22.4 7.8 52 59-113 35-86 (296)
65 3nwr_A A rubisco-like protein; 30.8 2.1E+02 0.0072 25.1 8.4 85 9-112 174-261 (432)
66 1brv_A Protein G, BRSV-G regio 30.8 12 0.00042 20.6 0.3 12 138-149 14-25 (32)
67 4hhu_A OR280; engineered prote 30.6 1.5E+02 0.0053 21.4 10.9 91 10-117 12-123 (170)
68 3qfw_A Ribulose-1,5-bisphospha 30.5 2.6E+02 0.0089 24.0 8.8 84 10-112 144-230 (378)
69 2rgy_A Transcriptional regulat 30.4 1.9E+02 0.0065 22.4 8.2 52 58-112 21-75 (290)
70 2vqe_K 30S ribosomal protein S 30.1 1.6E+02 0.0054 21.3 6.4 58 8-86 55-113 (129)
71 2zvi_A 2,3-diketo-5-methylthio 29.7 1.5E+02 0.0052 26.0 7.3 85 9-112 166-253 (425)
72 3r8n_K 30S ribosomal protein S 29.6 1.5E+02 0.0052 21.0 6.5 58 8-86 45-103 (117)
73 2fep_A Catabolite control prot 29.4 2E+02 0.0068 22.3 8.9 52 58-112 29-80 (289)
74 3p6l_A Sugar phosphate isomera 29.3 1.9E+02 0.0066 22.1 8.0 85 18-110 24-110 (262)
75 3rot_A ABC sugar transporter, 28.9 2E+02 0.007 22.3 8.4 80 57-148 15-98 (297)
76 3j20_M 30S ribosomal protein S 28.1 1.8E+02 0.0061 21.3 7.2 65 9-86 55-120 (137)
77 3ivs_A Homocitrate synthase, m 27.8 2.5E+02 0.0086 24.4 8.4 88 23-117 117-206 (423)
78 1tv8_A MOAA, molybdenum cofact 27.6 2.5E+02 0.0084 22.8 9.1 76 20-104 110-188 (340)
79 2z00_A Dihydroorotase; zinc bi 27.4 66 0.0023 26.7 4.5 53 132-184 293-365 (426)
80 3l6u_A ABC-type sugar transpor 27.0 2.1E+02 0.0073 21.9 9.3 77 58-148 21-101 (293)
81 1ugj_A Riken cDNA 2310057J16 p 26.4 83 0.0028 23.3 4.3 27 172-198 20-50 (141)
82 1onw_A Isoaspartyl dipeptidase 26.1 54 0.0018 27.1 3.7 51 131-181 268-339 (390)
83 1yqh_A DUF77, IG hypothetical 25.9 1.7E+02 0.0059 20.4 7.7 63 12-85 21-83 (109)
84 1ykw_A Rubisco-like protein; b 25.7 1.8E+02 0.0063 25.5 7.1 85 9-112 177-264 (435)
85 2zuv_A Lacto-N-biose phosphory 25.7 32 0.0011 32.3 2.3 21 24-44 344-366 (759)
86 3gbv_A Putative LACI-family tr 25.6 1.4E+02 0.0047 23.2 5.9 54 59-112 23-77 (304)
87 2qh8_A Uncharacterized protein 25.6 1.5E+02 0.0053 23.3 6.3 52 60-112 22-77 (302)
88 3lft_A Uncharacterized protein 25.6 1.4E+02 0.0046 23.5 5.9 53 59-112 15-70 (295)
89 3dcp_A Histidinol-phosphatase; 25.1 34 0.0012 28.0 2.2 31 131-163 244-274 (283)
90 1xwy_A DNAse TATD, deoxyribonu 25.1 1.4E+02 0.0047 23.2 5.8 42 139-180 201-258 (264)
91 3t7v_A Methylornithine synthas 25.1 2.8E+02 0.0096 22.6 9.6 84 19-112 152-237 (350)
92 2kwp_A Transcription elongatio 25.1 80 0.0027 22.8 4.0 37 52-88 16-53 (129)
93 4hps_A Pyrrolidone-carboxylate 24.9 2.4E+02 0.0082 22.3 7.2 60 92-151 70-165 (228)
94 1yrr_A N-acetylglucosamine-6-p 24.7 23 0.00078 29.5 1.1 34 152-185 311-346 (382)
95 3mkv_A Putative amidohydrolase 24.7 49 0.0017 26.0 3.0 55 131-186 312-367 (426)
96 3qxb_A Putative xylose isomera 24.7 2.2E+02 0.0075 22.7 7.2 53 20-83 39-91 (316)
97 4hnl_A Mandelate racemase/muco 24.2 3.3E+02 0.011 23.1 9.1 91 9-103 152-247 (421)
98 4dhx_B Enhancer of yellow 2 tr 23.9 1.8E+02 0.0062 20.0 6.2 18 183-200 78-95 (101)
99 2vm8_A Dihydropyrimidinase-rel 23.8 67 0.0023 27.7 4.0 55 131-185 329-406 (501)
100 2epi_A UPF0045 protein MJ1052; 23.4 1.7E+02 0.0058 20.0 5.3 60 13-84 21-80 (100)
101 3i5t_A Aminotransferase; pyrid 23.2 1.3E+02 0.0046 25.8 5.8 54 17-78 405-462 (476)
102 3g1w_A Sugar ABC transporter; 23.2 2.6E+02 0.009 21.6 9.2 77 59-147 18-97 (305)
103 3k4h_A Putative transcriptiona 22.4 2.6E+02 0.009 21.4 7.4 50 59-111 27-76 (292)
104 1lxj_A YBL001C, hypothetical 1 22.4 2E+02 0.0067 19.8 5.8 61 13-84 21-81 (104)
105 3ff5_A PEX14P, peroxisomal bio 22.1 1.1E+02 0.0039 18.7 3.7 32 146-177 22-53 (54)
106 3mab_A Uncharacterized protein 22.0 1.1E+02 0.0039 20.8 4.0 64 131-199 18-85 (93)
107 1va6_A Glutamate--cysteine lig 21.9 53 0.0018 29.6 2.9 32 149-180 462-497 (518)
108 1spv_A Putative polyprotein/ph 21.8 2.6E+02 0.0089 21.0 9.4 57 10-75 93-149 (184)
109 3ox4_A Alcohol dehydrogenase 2 21.6 1.9E+02 0.0064 24.5 6.3 40 73-112 57-96 (383)
110 3kw6_A 26S protease regulatory 21.2 84 0.0029 19.9 3.2 28 158-185 27-56 (78)
111 3ro0_A Pyrrolidone-carboxylate 21.1 2.4E+02 0.0083 22.2 6.5 60 92-151 49-144 (223)
112 1gkp_A Hydantoinase; hydrolase 21.0 91 0.0031 26.2 4.2 16 132-147 301-316 (458)
113 1zrr_A E-2/E-2' protein; nicke 21.0 2.3E+02 0.0078 21.4 6.1 58 20-88 23-82 (179)
114 1gkr_A Hydantoinase, non-ATP d 20.8 59 0.002 27.4 2.9 55 131-185 298-375 (458)
115 2w84_A Peroxisomal membrane pr 20.3 1.7E+02 0.0059 18.9 4.4 34 145-178 26-59 (70)
116 3nqb_A Adenine deaminase 2; PS 20.3 1E+02 0.0034 28.0 4.5 50 135-184 282-336 (608)
117 2qyg_A Ribulose bisphosphate c 20.0 4.5E+02 0.015 23.1 8.8 77 10-104 198-277 (452)
118 1o2d_A Alcohol dehydrogenase, 20.0 1.9E+02 0.0066 24.2 6.0 50 59-112 57-106 (371)
No 1
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=100.00 E-value=6.3e-48 Score=341.43 Aligned_cols=189 Identities=23% Similarity=0.330 Sum_probs=174.5
Q ss_pred ccCCHHHHHHHHHHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecC
Q psy15247 7 LRGDLDAVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCAT 86 (203)
Q Consensus 7 ~~~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R 86 (203)
+.+|+++|+++++++++++++|||+|+|+||+|..+... .|++++++++++++|++++++++||.+|+|+|++|
T Consensus 87 vl~t~ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~------~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R 160 (380)
T 4gxw_A 87 LLTRPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRV------SGIPYADAQAAIVTGMRDAARDFGIGARLIPSIDR 160 (380)
T ss_dssp TCCSHHHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHT------TCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEET
T ss_pred HcCCHHHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccc------cCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeecC
Confidence 445999999999999999999999999999999987653 37999999999999999999999999999999999
Q ss_pred CCCcccHHHHHHHHHhhCCCceEEEeCCCCC---C-----------------------Ccc------------------c
Q psy15247 87 KWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQ---P-----------------------ETG------------------P 122 (203)
Q Consensus 87 ~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~E---p-----------------------E~~------------------g 122 (203)
+.+++++.++++++.++++++||||||+|+| | |.+ |
T Consensus 161 ~~~~e~a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~al~~lga~RIg 240 (380)
T 4gxw_A 161 EQDPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLLHVDRVD 240 (380)
T ss_dssp TSCHHHHHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHHHHHTSCCSEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHcCCCeeeeccccCCchHHHHHHHHHcCCcccc
Confidence 9999999999999999998899999999999 3 433 2
Q ss_pred cc-c------ccc------------------------------cc-HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH-
Q psy15247 123 HG-S------VYS------------------------------YN-QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS- 163 (203)
Q Consensus 123 HG-~------l~~------------------------------~p-~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~- 163 (203)
|| . |++ || +.|+++|+|||||||||++|+|+|++||+.+++
T Consensus 241 HG~~~~~d~~L~~~l~~~~I~lEvCP~SN~~l~~v~~~~~~~~HP~~~l~~~Gv~vtinTDDp~~f~t~Ls~Ey~~~~~~ 320 (380)
T 4gxw_A 241 HGYTIVDNPELCARYAERGIVFTVVPTNSYYLRTLPPDQWAERHPMRKMPGLGLKIHPNTDDPTLHKVNPSEAWELMFSH 320 (380)
T ss_dssp ECGGGGGCHHHHHHHHHHTCEEEECTTCHHHHHHSCTTTHHHHCGGGGTGGGTCEEEECCBSHHHHTCCHHHHHHHHHHT
T ss_pred cceeeccChHHHHHHHHhCceeEECCcchhhhcccccccccccChHHHHHHCCCeEEECCCCchhhCCCHHHHHHHHHHH
Confidence 88 2 222 78 999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhhh
Q psy15247 164 WGFTREQFKIINLNAAEASFQPEHEKKELIKLLESEYS 201 (203)
Q Consensus 164 ~~l~~~~l~~l~~nai~~sF~~~~~k~~l~~~~~~~~~ 201 (203)
||||.+++++|++||+++||+++++|++|+++|.+.|.
T Consensus 321 ~gls~~dl~~l~~nsi~~sF~~~~~K~~l~~~~~~~~d 358 (380)
T 4gxw_A 321 FGFTIADLKQFMLNGIDGAWVDDDTKAAWRAAWAPEFD 358 (380)
T ss_dssp SCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988763
No 2
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=100.00 E-value=2.3e-44 Score=317.30 Aligned_cols=198 Identities=42% Similarity=0.641 Sum_probs=175.8
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHCCceEEEEccCccchhhhh-----hhhccCCCCHHHHHHHHHHHHHHhHhhcCceE
Q psy15247 4 GAFLRGDLDAVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTE-----LYQMLGYEGLKETVRRVYQGLKRGEDEFQVKS 78 (203)
Q Consensus 4 ~~~~~~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~ 78 (203)
++++++|+++|+++++++++++++|||+|+|+||+|+.++..+ ++...+|++.++++++++++++++++++||.+
T Consensus 66 ~~vl~~~~edl~~~a~e~~ed~a~dgV~Y~Eir~~P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~~~gi~~ 145 (367)
T 3iar_A 66 MPAIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGERDFGVKA 145 (367)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTTTEEEEEEEECGGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCCEEEEEEecHHHhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCeE
Confidence 4566669999999999999999999999999999999887541 12222479999999999999999999999999
Q ss_pred EEEEeecCCCCcccHHHHHHHHHhhCCCceEEEeCCCCC---C--------------------------Ccc--------
Q psy15247 79 KSILSCATKWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQ---P--------------------------ETG-------- 121 (203)
Q Consensus 79 rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~E---p--------------------------E~~-------- 121 (203)
|+|+|++|+.+. .+.++++++.++++++||||||+|+| | |++
T Consensus 146 ~lI~~~~R~~~~-~a~e~~~la~~~~~~~vvG~dL~g~E~~~~~~~~~~f~~~f~~A~~~gl~~~~HagE~~~~~~i~~a 224 (367)
T 3iar_A 146 RSILCCMRHQPN-WSPKVVELCKKYQQQTVVAIDLAGDETIPGSSLLPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEA 224 (367)
T ss_dssp EEEEEEETTCGG-GHHHHHHHHHHTTTTTEEEEEEESCTTSTTGGGCHHHHHHHHHHHHHTCEEEEEESSSSCHHHHHHH
T ss_pred EEEEEeCCCCCH-HHHHHHHHHHhhCCCCEEEEcCCCcccCCCcchHHHHHHHHHHHHHcCCeeEEecCCcCChHHHHHH
Confidence 999999999854 68999999999988899999999999 3 222
Q ss_pred ---------ccc-cc------cc---------------------------cc-HHHHhCCCcEEEcCCCCcCcCCChHHH
Q psy15247 122 ---------PHG-SV------YS---------------------------YN-QKFAKDNANFSLNSDDPTLTGRYLNED 157 (203)
Q Consensus 122 ---------gHG-~l------~~---------------------------~p-~~l~~~Gv~vsinTDDp~~f~t~Ls~E 157 (203)
||| .+ ++ || +.|+++||+|+||||||++|+++|++|
T Consensus 225 l~~lg~~RIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~~~~~~~hPi~~ll~~Gv~v~l~TDdp~~~~~~l~~e 304 (367)
T 3iar_A 225 VDILKTERLGHGYHTLEDQALYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRLKNDQANYSLNTDDPLIFKSTLDTD 304 (367)
T ss_dssp HHTSCCSEEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHHTSSSCTTSCCHHHHHHHTTCCEEECCBSHHHHTCCHHHH
T ss_pred HHccCCceeeeeeeecCCHHHHHHHHhCCcEEEECHHHHHHhCCCCCcccChHHHHHHCCCEEEECCCCccccCCCHHHH
Confidence 188 22 22 67 999999999999999999999999999
Q ss_pred HHHHHH-cCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhhhc
Q psy15247 158 YQLAQS-WGFTREQFKIINLNAAEASFQPEHEKKELIKLLESEYSD 202 (203)
Q Consensus 158 y~~~~~-~~l~~~~l~~l~~nai~~sF~~~~~k~~l~~~~~~~~~~ 202 (203)
|..+++ +|+|.+++++|++||+++||+++++|++|+++|++.|.+
T Consensus 305 ~~~a~~~~glt~~el~~l~~nsi~~sf~~~~~K~~l~~~~~~~~~~ 350 (367)
T 3iar_A 305 YQMTKRDMGFTEEEFKRLNINAAKSSFLPEDEKRELLDLLYKAYGM 350 (367)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc
Confidence 999999 999999999999999999999999999999999999864
No 3
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=100.00 E-value=2.1e-44 Score=315.18 Aligned_cols=188 Identities=20% Similarity=0.285 Sum_probs=172.9
Q ss_pred cccCCHHHHHHHHHHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeec
Q psy15247 6 FLRGDLDAVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCA 85 (203)
Q Consensus 6 ~~~~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~ 85 (203)
.+.+|+++++++++++++++++|||+|+|+||+|+.++.. |++.++++++++++++++++++||.+|+|+|++
T Consensus 71 ~vl~~~e~~~~~~~~~l~~~~~dgV~y~Eir~~P~~~~~~-------gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~ 143 (343)
T 3rys_A 71 AVLQTEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSR-------GVALETCVNGVANALATSEEDFGVSTLLIAAFL 143 (343)
T ss_dssp GGCCSHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHTT-------TCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEE
T ss_pred HHhCCHHHHHHHHHHHHHHHHHCCCEEEEEEecHHHhccC-------CCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeC
Confidence 3444999999999999999999999999999999988764 799999999999999999999999999999999
Q ss_pred CCCCcccHHHHHHHHHhhCCCceEEEeCCCCC---C-----------------------Ccc-----------------c
Q psy15247 86 TKWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQ---P-----------------------ETG-----------------P 122 (203)
Q Consensus 86 R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~E---p-----------------------E~~-----------------g 122 (203)
|+.+++.+.+++++|.++ +++||||||+|+| | |++ |
T Consensus 144 R~~~~~~a~~~l~~a~~~-~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~rIg 222 (343)
T 3rys_A 144 RDMSEDSALEVLDQLLAM-HAPIAGIGLDSAEVGNPPSKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDVLHVERID 222 (343)
T ss_dssp TTSCHHHHHHHHHHHHHT-TCCCCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHTSCCSEEE
T ss_pred CCCCHHHHHHHHHHHHhC-CCCEEEEecCCcccCCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHHHHHHHhcCCcceee
Confidence 999999999999999998 6789999999999 3 332 2
Q ss_pred cc-cc------cc---------------------------cc-HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH-cCC
Q psy15247 123 HG-SV------YS---------------------------YN-QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS-WGF 166 (203)
Q Consensus 123 HG-~l------~~---------------------------~p-~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~-~~l 166 (203)
|| .+ ++ || +.|+++||||+||||||++|+++|++||..+++ +|+
T Consensus 223 Hgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~~~~~~~hPi~~ll~~Gv~V~l~TDdp~~~~~~l~~E~~~a~~~~~l 302 (343)
T 3rys_A 223 HGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRLRAVDKLADHPLPEMLAIGLNVCVNSDDPAYFGGYVDDNFEQLVKVLEF 302 (343)
T ss_dssp ECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTSSSCGGGCSHHHHHHTTCCEEECCBSTTTTTCCHHHHHHHHHHHHCC
T ss_pred eeeeecCChHHHHHHHhcCCCeeEchhHHHHhCCCCCcccchHHHHHHCCCeEEEeCCCccccCCCHHHHHHHHHHHcCC
Confidence 88 22 22 67 999999999999999999999999999999999 999
Q ss_pred CHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhhh
Q psy15247 167 TREQFKIINLNAAEASFQPEHEKKELIKLLESEYS 201 (203)
Q Consensus 167 ~~~~l~~l~~nai~~sF~~~~~k~~l~~~~~~~~~ 201 (203)
|.+++++|++||+++||+++++|++|+++|++++.
T Consensus 303 ~~~~l~~l~~nsi~~sf~~~~~K~~l~~~~~~~~~ 337 (343)
T 3rys_A 303 SVPEQATLAANSIRSSFASDARKAVLLDEVTEWVK 337 (343)
T ss_dssp CHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999863
No 4
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=100.00 E-value=1.1e-40 Score=303.72 Aligned_cols=190 Identities=19% Similarity=0.246 Sum_probs=167.5
Q ss_pred cccCCHHHHHHHHHHHHHHHHHCCceEEEEccC--ccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcC--ceEEEE
Q psy15247 6 FLRGDLDAVERFAYEFIEDCSKNNVAYVEVRYM--PHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQ--VKSKSI 81 (203)
Q Consensus 6 ~~~~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~--P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--i~~rlI 81 (203)
.+.+++++++++++++++++++|||+|+|+|++ |..+... +|++.+++++++.++++++++++| |.+|+|
T Consensus 190 ~ll~~~~~~~~~~~e~l~d~a~dgV~Y~ElR~~f~p~~~~~g------~~l~~~~vv~~v~~~~~~~~~~~~~fI~~rlI 263 (508)
T 3lgd_A 190 GLIHYAPVFRDYVFRSMQEFYEDNVLYMEIRARLLPVYELSG------EHHDEEWSVKTYQEVAQKFVETHPEFIGIKII 263 (508)
T ss_dssp HHHTBHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCCBCTTS------CBCCHHHHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred HHhcCHHHHHHHHHHHHHHHHHcCceEEEEeecCchHhhccC------CCCCHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 445599999999999999999999999999955 5444321 369999999999999999999988 999999
Q ss_pred EeecCCCCcccHHHHHHHHHhhC---CCceEEEeCCCCC----C-------------------------Ccc--------
Q psy15247 82 LSCATKWPVDTVPDTLRLAQNCT---HYGVVGIDLLSIQ----P-------------------------ETG-------- 121 (203)
Q Consensus 82 ~~~~R~~~~e~a~~~~~~a~~~~---~~~vvG~dL~G~E----p-------------------------E~~-------- 121 (203)
+|++|+.+++.+.+++++|++++ +++||||||+|+| | |++
T Consensus 264 ~~~~R~~~~e~a~e~l~~a~~~~~~~~~~VvG~DLaG~E~~g~p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~ 343 (508)
T 3lgd_A 264 YSDHRSKDVAVIAESIRMAMGLRIKFPTVVAGFDLVGHEDTGHSLHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDR 343 (508)
T ss_dssp EEEETTSCHHHHHHHHHHHHHHHHHCTTTEEEEEEESCTTTSCCTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTT
T ss_pred EEecCCCCHHHHHHHHHHHHHHHhhCCCceEEeccCCCCCCCCCHHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHH
Confidence 99999999999999999999874 6789999999998 3 321
Q ss_pred -------------ccc-ccc------c---------------------------cc-HHHHhCCCcEEEcCCCCcCcCC-
Q psy15247 122 -------------PHG-SVY------S---------------------------YN-QKFAKDNANFSLNSDDPTLTGR- 152 (203)
Q Consensus 122 -------------gHG-~l~------~---------------------------~p-~~l~~~Gv~vsinTDDp~~f~t- 152 (203)
||| .+. + || +.|+++||||+||||||++|++
T Consensus 344 ~i~~Al~Lga~RIgHGv~l~~dp~l~~~l~~~~I~levCP~SN~~l~~v~~~~~hP~~~ll~~Gv~V~l~TDdp~~f~~~ 423 (508)
T 3lgd_A 344 NILDALMLNTTRIGHGFALSKHPAVRTYSWKKDIPIEVCPISNQVLKLVSDLRNHPVATLMATGHPMVISSDDPAMFGAK 423 (508)
T ss_dssp HHHHHHHTTCSSEEECTTGGGCHHHHHHHHHTTCCEEECHHHHHHTTSCSSGGGCTHHHHHHTTCCEEECCBSHHHHTCC
T ss_pred HHHHHHhcCCceeeeeEecCccHHHHHHHHhcCCeEEECcchHHHhCCCCCcccChHHHHHHCCCcEEEcCCCccccCCC
Confidence 177 222 1 78 9999999999999999999997
Q ss_pred ChHHHHHHHHH-cCC---CHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhhh
Q psy15247 153 YLNEDYQLAQS-WGF---TREQFKIINLNAAEASFQPEHEKKELIKLLESEYS 201 (203)
Q Consensus 153 ~Ls~Ey~~~~~-~~l---~~~~l~~l~~nai~~sF~~~~~k~~l~~~~~~~~~ 201 (203)
+|++||+.++. +++ +.+++++|++|||++||+++++|++|+++|++.|.
T Consensus 424 ~Ls~Ey~~a~~~~~~~~~~~~~l~~La~NSi~~Sfl~~~eK~~ll~~~~~~~~ 476 (508)
T 3lgd_A 424 GLSYDFYEVFMGIGGMKADLRTLKQLAMNSIKYSTLLESEKNTFMEIWKKRWD 476 (508)
T ss_dssp TTHHHHHHHHHTTSCTTCCHHHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 69999999999 876 89999999999999999999999999999999874
No 5
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=100.00 E-value=4.8e-41 Score=292.10 Aligned_cols=174 Identities=23% Similarity=0.364 Sum_probs=156.2
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEee
Q psy15247 5 AFLRGDLDAVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSC 84 (203)
Q Consensus 5 ~~~~~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~ 84 (203)
++++ |+++++++++++++++++|||+|+|+||+|+.++.. |++++++++++.++++++++++||.+|+|+|+
T Consensus 68 ~vl~-t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~~~-------gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~ 139 (326)
T 3pao_A 68 DVLR-TEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDR-------GIPFEVVLAGIRAALRDGEKLLGIRHGLILSF 139 (326)
T ss_dssp GGCC-SHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHHTT-------TCCHHHHHHHHHHHHHHHHHHHCCEECCEEEE
T ss_pred HHhC-CHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhccC-------CCCHHHHHHHHHHHHHHHHhhCceEEEEEEEe
Confidence 4455 999999999999999999999999999999988765 79999999999999999999999999999999
Q ss_pred cCCCCcccHHHHHHHHHhhCCCceEEEeCCCCC---C-----------------------Ccc-----------------
Q psy15247 85 ATKWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQ---P-----------------------ETG----------------- 121 (203)
Q Consensus 85 ~R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~E---p-----------------------E~~----------------- 121 (203)
+|+.+++.+.+++++|.+++ ++||||||+|+| | |++
T Consensus 140 ~R~~~~~~a~~~~~~a~~~~-~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~ri 218 (326)
T 3pao_A 140 LRHLSEEQAQKTLDQALPFR-DAFIAVGLDSSEVGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERI 218 (326)
T ss_dssp ETTSCHHHHHHHHHHHGGGG-GGCSEEEEESCCTTCCGGGGHHHHHHHHHTTCEECEEESSSSCHHHHHHHHHTTCCSSE
T ss_pred CCCCCHHHHHHHHHHHhhcc-ccceeeCCCCCCCCCCHHHHHHHHHHHHHcCCceeeecCCCCCHHHHHHHHhcCCCcee
Confidence 99999999999999999995 489999999999 3 332
Q ss_pred ccc-c------ccc---------------------------cc-HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH-cC
Q psy15247 122 PHG-S------VYS---------------------------YN-QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS-WG 165 (203)
Q Consensus 122 gHG-~------l~~---------------------------~p-~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~-~~ 165 (203)
||| . +++ || +.|+++||||+||||||++|+++|++||..+++ +|
T Consensus 219 gHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~~~~~~~hPi~~ll~~Gv~V~l~TDdp~~~~~~l~~e~~~a~~~~~ 298 (326)
T 3pao_A 219 DHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTILDMLERGVKVTVNSDDPAYFGGYVTENFHALQQSLG 298 (326)
T ss_dssp EECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTSSSSGGGCCHHHHHHHTCCEEECCBSHHHHTCCHHHHHHHHHHHHC
T ss_pred eeeeeecccHHHHHHHHHcCCeEEECchhHHHhCCCCCcccChHHHHHHCCCeEEEeCCCcccCCCCHHHHHHHHHHHcC
Confidence 288 2 222 67 999999999999999999999999999999999 99
Q ss_pred CCHHHHHHHHHHHHHHcCCCHH
Q psy15247 166 FTREQFKIINLNAAEASFQPEH 187 (203)
Q Consensus 166 l~~~~l~~l~~nai~~sF~~~~ 187 (203)
+|.+++++|++||+++||+++.
T Consensus 299 l~~~~l~~l~~nsi~~sf~~~~ 320 (326)
T 3pao_A 299 MTEEQARRLAQNSLDARLVKEG 320 (326)
T ss_dssp CCHHHHHHHHHHHHHTCC----
T ss_pred CCHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999974
No 6
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=100.00 E-value=2.8e-34 Score=253.23 Aligned_cols=181 Identities=22% Similarity=0.273 Sum_probs=164.8
Q ss_pred cCCHHHHHHHHHHHHHHHHHCCceEEEEccCccc-hhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhc--CceEEEEEee
Q psy15247 8 RGDLDAVERFAYEFIEDCSKNNVAYVEVRYMPHK-LLGTELYQMLGYEGLKETVRRVYQGLKRGEDEF--QVKSKSILSC 84 (203)
Q Consensus 8 ~~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~i~~rlI~~~ 84 (203)
.+|++++++.+++++++++++||+|+|+|++|.. +... |++.++++++++++++++++++ |+.+++|+|+
T Consensus 107 ~~t~ed~~~~a~~~l~e~~~~GV~y~E~r~dp~~~~~~~-------gl~~~~~~~a~~~~~~~a~~~~~~gi~~~li~~~ 179 (371)
T 2pgf_A 107 FHDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKY-------NLDIELIHQAIVKGIKEVVELLDHKIHVALMCIG 179 (371)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTEEEEEEEECHHHHHTTT-------TCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHHHHCCCEEEEEEECcccccccC-------CCCHHHHHHHHHHHHHHHHHHccCCCEEEEEEEe
Confidence 3499999999999999999999999999999976 5543 7999999999999999999999 9999999999
Q ss_pred cCCCCcccHHHHHHHHHhhCCCceEEEeCCCCC--C----------------------Cc--cc----------------
Q psy15247 85 ATKWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQ--P----------------------ET--GP---------------- 122 (203)
Q Consensus 85 ~R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~E--p----------------------E~--~g---------------- 122 (203)
+|+.+++.+.++++++.+ .+++|+|||++|+| | |. ++
T Consensus 180 ~r~~~~~~~~~~~~~a~~-~~~~vvg~dl~g~e~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~~~~i~~al~~lg~~r 258 (371)
T 2pgf_A 180 DTGHEAANIKASADFCLK-HKADFVGFDHGGHEVDLKEYKEIFDYVRESGVPLSVHAGEDVTLPNLNTLYSAIQVLKVER 258 (371)
T ss_dssp EESSTTCCHHHHHHHHHH-TTTTEEEEEEEESCCCGGGGHHHHHHHHHTTCCBEEEESCCTTSSSSHHHHHHHHTSCCSE
T ss_pred cCCCCHHHHHHHHHHHHh-CCCCEEEEecCCCcccHHHHHHHHHHHHHcCCcEEEeeCCCCCCCchHHHHHHHhccCCCE
Confidence 999999999999999988 67789999999998 3 55 21
Q ss_pred --cc-c------ccc---------------------------cc-HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH-c
Q psy15247 123 --HG-S------VYS---------------------------YN-QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS-W 164 (203)
Q Consensus 123 --HG-~------l~~---------------------------~p-~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~-~ 164 (203)
|| . +++ || +.|+++||+|+||||||++|+++|++||..++. +
T Consensus 259 i~Hgv~l~~~~~l~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~ll~~Gv~V~lgTD~~~~~~~~l~~e~~~a~~~~ 338 (371)
T 2pgf_A 259 IGHGIRVAESQELIDMVKEKNILLEVCPISNVLLKNAKSMDTHPIRQLYDAGVKVSVNSDDPGMFLTNINDDYEELYTHL 338 (371)
T ss_dssp EEECGGGGGCHHHHHHHHHTTCEEEECHHHHHHTTSSSCGGGCTHHHHHHTTCEEEECCBCHHHHTCCHHHHHHHHHHHH
T ss_pred EecchhccccHHHHHHHHHcCCeEEECcchhHHhCCCCccccChHHHHHHCCCeEEEeCCCCcccCCCHHHHHHHHHHHh
Confidence 77 1 122 57 999999999999999999999999999999999 9
Q ss_pred CCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q psy15247 165 GFTREQFKIINLNAAEASFQPEHEKKELIKLL 196 (203)
Q Consensus 165 ~l~~~~l~~l~~nai~~sF~~~~~k~~l~~~~ 196 (203)
|+|.++++++++||+++||+++++|++|+++|
T Consensus 339 ~l~~~~l~~lt~ns~~asf~~~~~K~~l~~~~ 370 (371)
T 2pgf_A 339 NFTLEDFMKMNEWALEKSFMDSNIKDKIKNLY 370 (371)
T ss_dssp CCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHhh
Confidence 99999999999999999999999999999876
No 7
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=99.94 E-value=1.9e-28 Score=229.81 Aligned_cols=174 Identities=17% Similarity=0.145 Sum_probs=138.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecCCCC
Q psy15247 10 DLDAVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCATKWP 89 (203)
Q Consensus 10 t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~ 89 (203)
+.++++++++++++++++|||+|+|+|++|.. .. +...+.++++++++. ..++.+|+|+++.|..+
T Consensus 349 ~~e~l~ri~~evled~a~dgV~Y~ElR~sp~~--~~-------~~~~~~l~~~v~~~~-----~~~~~vr~ii~i~R~~~ 414 (701)
T 2a3l_A 349 QGRFLGEITKQVFSDLEASKYQMAEYRISIYG--RK-------MSEWDQLASWIVNND-----LYSENVVWLIQLPRLYN 414 (701)
T ss_dssp TTTTHHHHHHHHHHHHTTSSSEEEEEEEECCS--SS-------STHHHHHHHHHHTTT-----CCCSSEEEEEEEECCHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCeEEEEEecccc--CC-------CCcHHHHHHHHHhcC-----ccCcceEEEEEeecccC
Confidence 67899999999999999999999999999943 22 455666666655442 24799999999999866
Q ss_pred cccHH-------HH--------HHH--------HHhhCCCceEEEeCCCCC--CC-------------------------
Q psy15247 90 VDTVP-------DT--------LRL--------AQNCTHYGVVGIDLLSIQ--PE------------------------- 119 (203)
Q Consensus 90 ~e~a~-------~~--------~~~--------a~~~~~~~vvG~dL~G~E--pE------------------------- 119 (203)
+..+. ++ ++. ++++.+++||||||+|+| ++
T Consensus 415 ~~~a~~~v~~F~~~l~nIF~PL~e~t~~p~~~~~l~~~~~~VvGfDL~G~E~~~~~~~~~~~~pp~~~~~~f~p~~~yy~ 494 (701)
T 2a3l_A 415 IYKDMGIVTSFQNILDNIFIPLFEATVDPDSHPQLHVFLKQVVGFDLVDDESKPERRPTKHMPTPAQWTNAFNPAFSYYV 494 (701)
T ss_dssp HHTTSSSCSSTHHHHHHHSSHHHHHHHCGGGSTTTHHHHTTEEEEEEESCTTSCCCCCCSSCCCTTTCCSSSCCCHHHHH
T ss_pred HHHhcChHHHHHHHHHhhhhHHHHhhcCcccCHHHHhcCCCEEEEEeecCCCcccccccccCCChHHcccccccHHHHHH
Confidence 54332 22 222 334446789999999998 21
Q ss_pred ---------------ccc------------------------------cc-c------ccc-------------------
Q psy15247 120 ---------------TGP------------------------------HG-S------VYS------------------- 128 (203)
Q Consensus 120 ---------------~~g------------------------------HG-~------l~~------------------- 128 (203)
..| || . |++
T Consensus 495 Yy~yan~~~Ln~ar~~~Gl~~i~~t~HaGE~~~~e~l~~alLg~~RIgHGv~l~edp~Li~lla~~~I~vevCP~SN~kl 574 (701)
T 2a3l_A 495 YYCYANLYVLNKLRESKGMTTITLRPHSGEAGDIDHLAATFLTCHSIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSL 574 (701)
T ss_dssp HHHHHHHHHHHHHHTTTTCCCCEECCCCSSSSCTHHHHHHHHHCSSCSCCGGGGGCHHHHHHHHHHTCCEEECHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCcccccCCCCCHHHHHHHhcCCCeEEEEeecccCHHHHHHHHHcCCcEEECccchhhh
Confidence 001 77 1 121
Q ss_pred ------cc-HHHHhCCCcEEEcCCCCcCcCC---ChHHHHHHHHH-cCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q psy15247 129 ------YN-QKFAKDNANFSLNSDDPTLTGR---YLNEDYQLAQS-WGFTREQFKIINLNAAEASFQPEHEKKELIKLLE 197 (203)
Q Consensus 129 ------~p-~~l~~~Gv~vsinTDDp~~f~t---~Ls~Ey~~~~~-~~l~~~~l~~l~~nai~~sF~~~~~k~~l~~~~~ 197 (203)
|| +.|+++||+|+||||||++|++ +|++||..++. ++++..++.+|++||+++||+++++|++|+.++.
T Consensus 575 ~~~~~~HPi~~ll~~Gv~VsLgTDdp~~~~~t~~dL~~Ey~~aa~~~~ls~~dl~~la~Ns~~asfl~~~~K~~ll~~~~ 654 (701)
T 2a3l_A 575 FLDYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEIARNSVYQSGFSHALKSHWIGKDY 654 (701)
T ss_dssp TCCSTTCSHHHHHHTTCCEEECCBCHHHHCCSSSHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHSCCCHHHHHHHSCTTT
T ss_pred ccCchHhHHHHHHHCCCcEEEeCCCccccCCCCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 78 9999999999999999999998 59999999999 9999999999999999999999999999987654
No 8
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=97.31 E-value=0.016 Score=50.28 Aligned_cols=57 Identities=14% Similarity=0.181 Sum_probs=45.3
Q ss_pred cc-HHHHhCCCcEEEcCCCCcCc-CCChHHHHHHHHH-c----------CCCHHHHHHH-HHHHHHHcCCC
Q psy15247 129 YN-QKFAKDNANFSLNSDDPTLT-GRYLNEDYQLAQS-W----------GFTREQFKII-NLNAAEASFQP 185 (203)
Q Consensus 129 ~p-~~l~~~Gv~vsinTDDp~~f-~t~Ls~Ey~~~~~-~----------~l~~~~l~~l-~~nai~~sF~~ 185 (203)
+| +.++++|++|+++||.|... ..++-.++..+.. . +++..++.++ ..|+.++..++
T Consensus 308 ~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~ 378 (456)
T 3ls9_A 308 APIREYLDAGITVGFGTTGSASNDGGNLLGDLRLAALAHRPADPNEPEKWLSARELLRMATRGSAECLGRP 378 (456)
T ss_dssp CCHHHHHHTTCEEEECCCCTTSSCCCCHHHHHHHHHHHTGGGSTTCGGGSCCHHHHHHHTTHHHHHHTTCT
T ss_pred chHHHHHHCCCcEEEECCCCccCCCCCHHHHHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHhCCC
Confidence 35 88999999999999999854 4588888887765 3 7999886665 47888877665
No 9
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=97.23 E-value=0.0071 Score=52.66 Aligned_cols=58 Identities=16% Similarity=0.162 Sum_probs=45.8
Q ss_pred cc-HHHHhCCCcEEEcCCCCcCc-CCChHHHHHHHH--------H-cCCCHHH-HHHHHHHHHHHcCCCH
Q psy15247 129 YN-QKFAKDNANFSLNSDDPTLT-GRYLNEDYQLAQ--------S-WGFTREQ-FKIINLNAAEASFQPE 186 (203)
Q Consensus 129 ~p-~~l~~~Gv~vsinTDDp~~f-~t~Ls~Ey~~~~--------~-~~l~~~~-l~~l~~nai~~sF~~~ 186 (203)
+| +.++++|++|+++||.|... ..++-+++..+. . .+++..+ ++....|+.+...+++
T Consensus 292 ~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~ 361 (451)
T 4dyk_A 292 CPVEKLWQAGVNVAIGTDGAASNNDLDLLGETRTAALLAKAVYGQATALDAHRALRMATLNGARALGLER 361 (451)
T ss_dssp CCHHHHHHHTCCEEECCCCGGGSSCCCHHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHHTCTT
T ss_pred ccHHHHHhCCCeEEEECCCCccCCCCCHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCC
Confidence 35 88999999999999999763 458888887766 3 5799988 5566688888877654
No 10
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=97.00 E-value=0.019 Score=50.35 Aligned_cols=57 Identities=16% Similarity=0.115 Sum_probs=43.1
Q ss_pred cc-HHHHhCCCcEEEcCCCCcCc-CCChHHHHHHHHH-c----C---CCHHHHHH-HHHHHHHHcCCC
Q psy15247 129 YN-QKFAKDNANFSLNSDDPTLT-GRYLNEDYQLAQS-W----G---FTREQFKI-INLNAAEASFQP 185 (203)
Q Consensus 129 ~p-~~l~~~Gv~vsinTDDp~~f-~t~Ls~Ey~~~~~-~----~---l~~~~l~~-l~~nai~~sF~~ 185 (203)
+| +.++++||+|+++||.|... ..++-.++..+.. . + ++..++.+ ...|+.++..++
T Consensus 330 ~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 397 (479)
T 3h4u_A 330 APVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRD 397 (479)
T ss_dssp CCHHHHHHTTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHHHCTTSCCHHHHHHHTTHHHHHHHTCS
T ss_pred CCHHHHHHCCCeEEEeCCCCccCCCcCHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 35 89999999999999999875 5788888876544 2 5 88877554 466777776654
No 11
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=96.88 E-value=0.046 Score=47.40 Aligned_cols=176 Identities=11% Similarity=0.038 Sum_probs=99.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCceEEEEccC-ccchhh----hhhhh---------c-cCCCCHHHHHHHHHHHHHHhHhh
Q psy15247 9 GDLDAVERFAYEFIEDCSKNNVAYVEVRYM-PHKLLG----TELYQ---------M-LGYEGLKETVRRVYQGLKRGEDE 73 (203)
Q Consensus 9 ~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~-P~~~~~----~~~~~---------~-~~~~~~~~~~~~v~~~~~~~~~~ 73 (203)
.++++++..+...+.++.+.||.++.-... |..... .+.+. + ...-+.++.++.+.+-+++....
T Consensus 103 ~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (447)
T 4f0r_A 103 VHDDFVFDGSLLAMGEMIRGGTTTINDMYFYNAAVARAGLASGMRTFVGCSILEFPTNYASNADDYIAKGMAERSQFLGE 182 (447)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTEEEEEECBSCHHHHHHHHHHHTCEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHTTTTC
T ss_pred CCHHHHHHHHHHHHHHHHhCCcEEEEEcccCHHHHHHHHHHcCCeEEEEchhcCCCcccccCHHHHHHHHHHHHHHhcCC
Confidence 388999999999999999999998875432 211100 00000 0 00113455555555444433211
Q ss_pred cCceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEeCCCCC-------------C-----Ccc--------ccc---
Q psy15247 74 FQVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQ-------------P-----ETG--------PHG--- 124 (203)
Q Consensus 74 ~~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~E-------------p-----E~~--------gHG--- 124 (203)
..+.+.+-.......+++...+.++.|.++. ..|-+=..+.. | +.+ .|+
T Consensus 183 ~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g--~~v~iH~~~~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~ 260 (447)
T 4f0r_A 183 DLLTFTLAPHAPYTVSDDTFRKVVTLAEQED--MLIHCHIHETADEVNNSVKEHGQRPLARLQRLGLLSPRLVAAHMVHL 260 (447)
T ss_dssp TTEEEEEEECCGGGSCHHHHHHHHHHHHHHT--CCEEEEESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSC
T ss_pred CceEEEEecCCCCCCCHHHHHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEeccCC
Confidence 1122222222223445556666666666652 12222222321 0 000 055
Q ss_pred -----cccc--------------------cc-HHHHhCCCcEEEcCCCCcC-cCCChHHHHHHHH--------H-cCCCH
Q psy15247 125 -----SVYS--------------------YN-QKFAKDNANFSLNSDDPTL-TGRYLNEDYQLAQ--------S-WGFTR 168 (203)
Q Consensus 125 -----~l~~--------------------~p-~~l~~~Gv~vsinTDDp~~-f~t~Ls~Ey~~~~--------~-~~l~~ 168 (203)
..+. +| +.++++|++++++||.|.. ...++-.++..+. . .+++.
T Consensus 261 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 340 (447)
T 4f0r_A 261 NDAEVELAARHGLSTAHNPASNMKLASGISPVSKLMDAGVAVGIGTDGAASNNKLDMLAETRLAALLAKVGTLDPTSVPA 340 (447)
T ss_dssp CHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHTTCEEEECCCCGGGTCCCCHHHHHHHHHHHHHHHHTCTTSSCH
T ss_pred CHHHHHHHHHcCCEEEECchhhhhcCCCCCcHHHHHHCCCcEEEeCCCCcCCCCCCHHHHHHHHHHHhhhhccCCCCCCH
Confidence 0010 35 8999999999999999976 3468888887665 2 48999
Q ss_pred HH-HHHHHHHHHHHcCCCH
Q psy15247 169 EQ-FKIINLNAAEASFQPE 186 (203)
Q Consensus 169 ~~-l~~l~~nai~~sF~~~ 186 (203)
++ ++....|+.+...+++
T Consensus 341 ~~al~~~T~n~A~~lg~~~ 359 (447)
T 4f0r_A 341 AAAIRMATLNGARALGIAD 359 (447)
T ss_dssp HHHHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 98 5666788888877654
No 12
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=96.83 E-value=0.061 Score=46.93 Aligned_cols=176 Identities=13% Similarity=0.078 Sum_probs=102.3
Q ss_pred CCHHHHHHHHHHHHHHHHHCCceEEEEccC-ccchhhh----hhhh---------c-cCCCCHHHHHHHHHHHHHHhHhh
Q psy15247 9 GDLDAVERFAYEFIEDCSKNNVAYVEVRYM-PHKLLGT----ELYQ---------M-LGYEGLKETVRRVYQGLKRGEDE 73 (203)
Q Consensus 9 ~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~-P~~~~~~----~~~~---------~-~~~~~~~~~~~~v~~~~~~~~~~ 73 (203)
.++++++..+...+.++.+.||.++.-... |...... +.+. + ...-+.+++++...+-+++....
T Consensus 125 ~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (468)
T 3lnp_A 125 VDEHFVKQGTELAIAEMIQSGTTTFADMYFYPQQSGEAALAAGIRAVCFAPVLDFPTNYAQNADEYIRKAIECNDRFNNH 204 (468)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTEEEEEECCSCHHHHHHHHHHHTCEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHhCCcEEEEEcccCHHHHHHHHHHcCCeEEEeccccCCCcccccCHHHHHHHHHHHHHHhhcC
Confidence 388999999999999999999998875432 2211110 0000 0 00124556666555555544322
Q ss_pred c-----CceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEeCCCCC-------------C-----Ccc--------c
Q psy15247 74 F-----QVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQ-------------P-----ETG--------P 122 (203)
Q Consensus 74 ~-----~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~E-------------p-----E~~--------g 122 (203)
. .+.+.+-.......+++...+.++.|.++. ..|-+=..+.. | +.+ .
T Consensus 205 ~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g--~~v~~H~~e~~~~~~~~~~~~g~~~i~~~~~~g~l~~~~~~~ 282 (468)
T 3lnp_A 205 PMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLD--MPVQIHLHETDFEVSESLETFNKRPTQRLADIGFLNERVSCV 282 (468)
T ss_dssp GGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHT--CCEEEEESCSHHHHHHHHHHHSSCHHHHHHHTTCCSTTEEEE
T ss_pred CcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHHcC--CcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEE
Confidence 1 122222222233455666666777776652 12222233321 0 011 0
Q ss_pred cc--------cccc--------------------cc-HHHHhCCCcEEEcCCCCcC-cCCChHHHHHHHH--------H-
Q psy15247 123 HG--------SVYS--------------------YN-QKFAKDNANFSLNSDDPTL-TGRYLNEDYQLAQ--------S- 163 (203)
Q Consensus 123 HG--------~l~~--------------------~p-~~l~~~Gv~vsinTDDp~~-f~t~Ls~Ey~~~~--------~- 163 (203)
|| ..+. +| +.++++|++++++||.|.. ...++-.++..+. .
T Consensus 283 H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (468)
T 3lnp_A 283 HMTQVDDGDIKILQKTGASIIHCPESNLKLASGFCPIAKLSAANIPLAIGTDGAASNNDLDMFSETKTAALLAKGVSQDA 362 (468)
T ss_dssp ECCSCCHHHHHHHHHHCCEEEECHHHHHHTTCCCCCHHHHHHTTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHHHTCT
T ss_pred eccCCCHHHHHHHHhcCCEEEEChhhhhhcCCCCCCHHHHHHCCCeEEEECCCCcCCCCCCHHHHHHHHHHHhhhccCCC
Confidence 66 1111 35 8999999999999999976 3468888887665 2
Q ss_pred cCCCHHH-HHHHHHHHHHHcCCCH
Q psy15247 164 WGFTREQ-FKIINLNAAEASFQPE 186 (203)
Q Consensus 164 ~~l~~~~-l~~l~~nai~~sF~~~ 186 (203)
.+++..+ ++.+..|+.++..+++
T Consensus 363 ~~l~~~~al~~~T~~~A~~lg~~~ 386 (468)
T 3lnp_A 363 SAIPAIEALTMATLGGARALGIDD 386 (468)
T ss_dssp TSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred CcCCHHHHHHHHHHHHHHHhCCCC
Confidence 4799888 5666788888877654
No 13
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=96.45 E-value=0.11 Score=45.56 Aligned_cols=175 Identities=11% Similarity=0.023 Sum_probs=99.6
Q ss_pred CHHHHHHHHHHHHHHHHHCCceEEEEcc-Cccchhhh----hhhh---------c-cCCCCHHHHHHHHHHHHHHhHhhc
Q psy15247 10 DLDAVERFAYEFIEDCSKNNVAYVEVRY-MPHKLLGT----ELYQ---------M-LGYEGLKETVRRVYQGLKRGEDEF 74 (203)
Q Consensus 10 t~~~l~~~~~~~~~~~~~dgV~Y~Elr~-~P~~~~~~----~~~~---------~-~~~~~~~~~~~~v~~~~~~~~~~~ 74 (203)
++++++..+...+.++.+.||..+.-.. .|...... +.+. + ...-+.++.++.+.+.+++.....
T Consensus 113 ~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (472)
T 4dzh_A 113 GPEFVADGTTLAIAEMLRGGTTCVNENYFFADVQAAVYKQHGFRALVGAVIIDFPTAWASSDDEYFARAGELHDQWRDDP 192 (472)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHHHHhCCcEEEEEcccCHHHHHHHHHHhCCeEEEEecccCCCcccccCHHHHHHHHHHHHHHhCCCC
Confidence 8899999999999999999999876332 12111000 0000 0 001244566666555555443321
Q ss_pred CceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEeCCCCC-------------C-----Ccc--------ccc----
Q psy15247 75 QVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQ-------------P-----ETG--------PHG---- 124 (203)
Q Consensus 75 ~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~E-------------p-----E~~--------gHG---- 124 (203)
-+.+.+-.......+++...+.+++|.++.- .|-+=+.+.. | +.+ .|+
T Consensus 193 ~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~--~v~iH~~e~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~l~ 270 (472)
T 4dzh_A 193 LISTAFAPHAPYTVNDANFERVRMLADQLDM--PVHLHTHETAQEVADSVAQYGQRPLARLDRLGLVNDRLIAVHMTQLT 270 (472)
T ss_dssp SEEEEEEECCTTTSCHHHHHHHHHHHHHHTC--CEEEEESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCC
T ss_pred ceEEEEecCCCCCCCHHHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEeccCCC
Confidence 1222222223334556666677777776621 2222232221 0 000 155
Q ss_pred ----cccc--------------------cc-HHHHhCCCcEEEcCCCCcCc-CCChHHHHHHHHH-c--------CCCHH
Q psy15247 125 ----SVYS--------------------YN-QKFAKDNANFSLNSDDPTLT-GRYLNEDYQLAQS-W--------GFTRE 169 (203)
Q Consensus 125 ----~l~~--------------------~p-~~l~~~Gv~vsinTDDp~~f-~t~Ls~Ey~~~~~-~--------~l~~~ 169 (203)
.++. +| +.++++||+|+++||.|.-. ..++-.++..+.. . +++..
T Consensus 271 ~~~i~~l~~~g~~v~~~p~s~~~~~~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~l~~~ 350 (472)
T 4dzh_A 271 EAEIHLCAERGVSVVHCPESNLKLASGFCPACALQRASVNLAIGTDGCASNNDLDMFSENRTAAILAKAVANDATALDAA 350 (472)
T ss_dssp HHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHTTCEEEECCCCTTSSCCCCHHHHHHHHHHHHHHHHTCTTSSCHH
T ss_pred HHHHHHHHHcCCEEEEChHHHHhcCCCCccHHHHHHCCCCEEEECCCCcCCCCCCHHHHHHHHHHHhhhhcCCCCcCCHH
Confidence 1111 35 89999999999999999643 4688888766543 1 69988
Q ss_pred H-HHHHHHHHHHHcCCCH
Q psy15247 170 Q-FKIINLNAAEASFQPE 186 (203)
Q Consensus 170 ~-l~~l~~nai~~sF~~~ 186 (203)
+ ++....|+.++..+++
T Consensus 351 ~al~~~T~~~A~~lgl~~ 368 (472)
T 4dzh_A 351 TTLRAATLGGARALGFGD 368 (472)
T ss_dssp HHHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHcCCCC
Confidence 8 5555678888877654
No 14
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=96.32 E-value=0.037 Score=48.59 Aligned_cols=29 Identities=14% Similarity=0.057 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHHHHHCCceEEEEccC
Q psy15247 10 DLDAVERFAYEFIEDCSKNNVAYVEVRYM 38 (203)
Q Consensus 10 t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~ 38 (203)
++++++..+...+.++.+.||.+++-.+.
T Consensus 93 ~~e~~~~~a~~~~~e~l~~GvTtv~d~~~ 121 (453)
T 3mdu_A 93 SPEQIEVIACQLYIEMLKAGYTAVAEFHY 121 (453)
T ss_dssp CHHHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEeeE
Confidence 89999999999999999999999987654
No 15
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=94.82 E-value=0.024 Score=48.74 Aligned_cols=58 Identities=22% Similarity=0.297 Sum_probs=45.3
Q ss_pred cc-HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHHcCCCHHH-HHHHHHHHHHHcCCCH
Q psy15247 129 YN-QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQSWGFTREQ-FKIINLNAAEASFQPE 186 (203)
Q Consensus 129 ~p-~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~~~l~~~~-l~~l~~nai~~sF~~~ 186 (203)
+| +.++++|++|+++||.|.....++..++..+...+++.++ ++....|+.+...+++
T Consensus 289 ~~~~~l~~~Gv~v~lgtD~~~~~~~~l~~~~~~~~~~gl~~~~al~~~T~n~A~~lg~~~ 348 (396)
T 3ooq_A 289 ETIAKLLKDGVLIALMCDHPVIPLEFATVQAATAMRYGAKEEDLLKILTVNPAKILGLED 348 (396)
T ss_dssp THHHHHHHTTCCEEECCTTTTSCGGGHHHHHHHGGGGTCCHHHHHHTTTHHHHHHTTCTT
T ss_pred HHHHHHHHCCCEEEEEcCCCccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 35 9999999999999999976666676665555448999888 6667788888877654
No 16
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=94.24 E-value=0.11 Score=44.65 Aligned_cols=56 Identities=21% Similarity=0.096 Sum_probs=45.8
Q ss_pred HHHHhCCCcEEEcCCCCcCc--CCChHHHHHHHHH-cCCCHHHHHHH-HHHHHHHcCCCH
Q psy15247 131 QKFAKDNANFSLNSDDPTLT--GRYLNEDYQLAQS-WGFTREQFKII-NLNAAEASFQPE 186 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f--~t~Ls~Ey~~~~~-~~l~~~~l~~l-~~nai~~sF~~~ 186 (203)
+.++++|++++++||.|... ..++-.++..+.. .+++.+++.++ ..|+.+...+++
T Consensus 303 ~~~~~~Gv~~~~gtD~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 362 (416)
T 2q09_A 303 VALRKAGVPMAVSSDINPGTAPIVSLRMAMNMACTLFGLTPVEAMAGVTRHAARALGEQE 362 (416)
T ss_dssp HHHHHTTCCEEECCCCBTTTBCCCCHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred HHHHHCCCeEEEecCCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCc
Confidence 88999999999999997533 3588899988887 89999996554 788888877754
No 17
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=94.23 E-value=0.043 Score=46.65 Aligned_cols=56 Identities=20% Similarity=0.158 Sum_probs=45.2
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHHcCCCHHHH-HHHHHHHHHHcCCCH
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQSWGFTREQF-KIINLNAAEASFQPE 186 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~~~l~~~~l-~~l~~nai~~sF~~~ 186 (203)
+.++++|++|+++||.|......+..|+..+.+.|++..++ +....|+.+...+++
T Consensus 304 ~~~~~~Gv~v~~gTD~~~~~~~~~~~e~~~~~~~gl~~~~al~~aT~~~A~~lg~~~ 360 (403)
T 3gnh_A 304 RKALKAGVKMVYGTDAGIYPHGDNAKQFAVMVRYGATPLQAIQSATLTAAEALGRSK 360 (403)
T ss_dssp HHHHHHTCEEECCCCBTTBCTTCGGGHHHHHHHTTCCHHHHHHHTTHHHHHHHTCTT
T ss_pred HHHHHCCCeEEEecCCCCCCCCchHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 68999999999999999777777778888776689999884 555778887776653
No 18
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=94.10 E-value=0.042 Score=47.23 Aligned_cols=56 Identities=7% Similarity=0.026 Sum_probs=44.6
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHHcCCCHHHHH-HHHHHHHHHcCCCH
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQSWGFTREQFK-IINLNAAEASFQPE 186 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~~~l~~~~l~-~l~~nai~~sF~~~ 186 (203)
+.++++|++++++||.|.....++..|+..+.+.+++..++. ....|+.++.++++
T Consensus 314 ~~~~~~Gv~v~~gTD~~~~~~~~~~~e~~~~~~~gls~~eal~~~T~n~A~~lg~~~ 370 (418)
T 2qs8_A 314 RKAYEKGVKIAFGTDAGVQKHGTNWKEFVYMVENGMPAMKAIQSATMETAKLLRIED 370 (418)
T ss_dssp HHHHHHTCCBCCCCCBTTBCTTCTTHHHHHHHHTTCCHHHHHHHTTHHHHHHTTCTT
T ss_pred HHHHHCCCEEEEeCCCCcCCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 678899999999999986444577788877666899999955 45789998887764
No 19
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=92.34 E-value=0.37 Score=42.55 Aligned_cols=58 Identities=14% Similarity=0.038 Sum_probs=44.8
Q ss_pred cc-HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH------------cCCCHHHHHHH-HHHHHHHcCCCH
Q psy15247 129 YN-QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS------------WGFTREQFKII-NLNAAEASFQPE 186 (203)
Q Consensus 129 ~p-~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~------------~~l~~~~l~~l-~~nai~~sF~~~ 186 (203)
.| +.++++||+|+++||.++.+..++-+++..+.. .+++..++..+ ..|+.+...+++
T Consensus 335 ~p~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lgl~~ 406 (476)
T 4aql_A 335 LNVLEVLKHEVKIGLGTDVAGGYSYSMLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLATLGGSQALGLDG 406 (476)
T ss_dssp CCHHHHHHTTCEEEECCCTTTSSCCCHHHHHHHHHHHHHHHHHTTSSSSCCCHHHHHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHCCCcEEEeCCCCCCCCCCHHHHHHHHHHHHhhhhcccCCCCcCCHHHHHHHHHHHHHHHhCCCC
Confidence 35 899999999999999987777888888876653 27898876554 568877766543
No 20
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=92.09 E-value=2.4 Score=36.58 Aligned_cols=52 Identities=17% Similarity=0.110 Sum_probs=36.6
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH-c--------------CCCHHHHHH-HHHHHHHHcCC
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS-W--------------GFTREQFKI-INLNAAEASFQ 184 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~-~--------------~l~~~~l~~-l~~nai~~sF~ 184 (203)
+.++++|++|+++||. ....++-.++..+.. . +++..++.. ...|+.++..+
T Consensus 315 ~~~~~~Gv~v~lgtD~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~lg~ 382 (458)
T 4f0l_A 315 TEFAAAGGKFGIGSDS--NVLIGIGDELRQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGR 382 (458)
T ss_dssp HHHHHTTCEEEECCBT--TSSCCHHHHHHHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCeEEEECCC--CCCCCHHHHHHHHHHHHhhhccCccccCCcccCCHHHHHHHHHHHHHHHhCC
Confidence 8899999999999994 345677777765542 1 377777554 56677776554
No 21
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=91.94 E-value=0.14 Score=43.70 Aligned_cols=55 Identities=11% Similarity=0.130 Sum_probs=42.9
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHHcCCCHHHH-HHHHHHHHHHcCCC
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQSWGFTREQF-KIINLNAAEASFQP 185 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~~~l~~~~l-~~l~~nai~~sF~~ 185 (203)
+.++++|++++++||.|.....++..++..+.+.++|.+++ +....|+.+...++
T Consensus 303 ~~~~~~Gv~~~~gTD~~~~p~~~~~~~~~~~~~~gls~~~al~~~T~n~A~~lgl~ 358 (408)
T 3be7_A 303 MNAHRRGAIITFGTDAGIFDHGDNAKQFAYMVEWGMTPLEAIQASTIKTATLFGIE 358 (408)
T ss_dssp HHHHHHTCCEECCCCBTTBCTTCGGGHHHHHHHTTCCHHHHHHTTTHHHHHHHTCS
T ss_pred HHHHHCCCEEEEECCCCCCCCchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCC
Confidence 67789999999999998643456777887766689999985 55578888877664
No 22
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=91.36 E-value=0.5 Score=40.43 Aligned_cols=56 Identities=20% Similarity=0.118 Sum_probs=44.1
Q ss_pred HHHHhCCCcEEEcCCCCcCc--CCChHHHHHHHHH-cCCCHHHHH-HHHHHHHHHcCCCH
Q psy15247 131 QKFAKDNANFSLNSDDPTLT--GRYLNEDYQLAQS-WGFTREQFK-IINLNAAEASFQPE 186 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f--~t~Ls~Ey~~~~~-~~l~~~~l~-~l~~nai~~sF~~~ 186 (203)
+.++++|++|+++||-+.-+ ..++-.+...+.. .++|..+.. ....|+.++.++++
T Consensus 310 ~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~ 369 (421)
T 2bb0_A 310 RAMIDEGVCVSLATDFNPGSSPTENIQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGE 369 (421)
T ss_dssp HHHHHTTCCEEECCCBBTTTBCCCCHHHHHHHHHHHSCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred HHHHHCCCeEEEeCCCCCCCCcccCHHHHHHHHhcccCCCHHHHHHHHHHHHHHHhCccC
Confidence 88999999999999976422 3478788887777 899999854 44788888887754
No 23
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=91.34 E-value=0.39 Score=40.64 Aligned_cols=55 Identities=15% Similarity=0.102 Sum_probs=39.3
Q ss_pred HHHHhCCCcEEEcCCCCc----CcCC-ChHHHHHHHHH-cCC----CHH-HHHHHHHHHHHHcCCC
Q psy15247 131 QKFAKDNANFSLNSDDPT----LTGR-YLNEDYQLAQS-WGF----TRE-QFKIINLNAAEASFQP 185 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~----~f~t-~Ls~Ey~~~~~-~~l----~~~-~l~~l~~nai~~sF~~ 185 (203)
+.++++|++|+++||+|. .+++ ++-++...+.. .++ +.+ -++....|+.++..++
T Consensus 289 ~~~~~~Gv~v~lgtD~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~ 354 (403)
T 2qt3_A 289 IKLLEAGINLGCASDNIRDFWVPFGNGDMVQGALIETQRLELKTNRDLGLIWKMITSEGARVLGIE 354 (403)
T ss_dssp HHHHHTTCEEEEECCSCSSSSCSCCCCCHHHHHHHHHHHTTCCSHHHHHHHHHHTTHHHHHHHTCG
T ss_pred HHHHHcCCcEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCccCHHHHHHHHHHHHHHhcCCC
Confidence 889999999999999973 3443 77777766665 564 333 3566667887777664
No 24
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=91.22 E-value=0.086 Score=45.05 Aligned_cols=55 Identities=11% Similarity=0.101 Sum_probs=43.1
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHHcCCCHHHH-HHHHHHHHHHcCCCH
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQSWGFTREQF-KIINLNAAEASFQPE 186 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~~~l~~~~l-~~l~~nai~~sF~~~ 186 (203)
+.++++||+|+++||.|+....++..|+..+.+. ++..+. +....|+.++..+++
T Consensus 309 ~~l~~~Gv~v~~gTD~~~~~~~~~~~e~~~~~~~-ls~~eal~~aT~~~A~~lg~~~ 364 (423)
T 3feq_A 309 EIYANAGVKMGFGSDLLGEMHAFQSGEFRIRAEV-LGNLEALRSATTVAAEIVNMQG 364 (423)
T ss_dssp HHHHHHTCCBCCCCCCCGGGGGGTTHHHHHHHTT-SCHHHHHHTTTHHHHHHTTCBT
T ss_pred HHHHHCCCEEEECCCCCCCCCcchHHHHHHHHhh-CCHHHHHHHHHHHHHHHhCCCC
Confidence 7899999999999999876666777788766545 888874 556778888877654
No 25
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=90.72 E-value=0.15 Score=43.88 Aligned_cols=55 Identities=7% Similarity=0.144 Sum_probs=42.4
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHHcCCCHHHH-HHHHHHHHHHcCCCH
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQSWGFTREQF-KIINLNAAEASFQPE 186 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~~~l~~~~l-~~l~~nai~~sF~~~ 186 (203)
+.++++|++|+++||.|+....++..|+..+.+. ++..+. +....|+.++..+++
T Consensus 312 ~~~~~~Gv~v~lgTD~~~~~~~~~~~e~~~~~~~-l~~~eal~~aT~~~A~~lg~~~ 367 (426)
T 2r8c_A 312 EIMKRAGVKMGFGTDLLGEAQRLQSDEFRILAEV-LSPAEVIASATIVSAEVLGMQD 367 (426)
T ss_dssp HHHHHTTCEECCCCCCCGGGGGGTTHHHHHHTTT-SCHHHHHHHTTHHHHHHTTCTT
T ss_pred HHHHHcCCeEEEecCCCCCCCcchHHHHHHHHhc-CCHHHHHHHHHHHHHHHhCCCC
Confidence 7899999999999999876666677777665444 888875 555678888877664
No 26
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=90.17 E-value=0.55 Score=40.06 Aligned_cols=56 Identities=21% Similarity=0.094 Sum_probs=44.2
Q ss_pred HHHHhCCCcEEEcCCCCcCc--CCChHHHHHHHHH-cCCCHHHHH-HHHHHHHHHcCCCH
Q psy15247 131 QKFAKDNANFSLNSDDPTLT--GRYLNEDYQLAQS-WGFTREQFK-IINLNAAEASFQPE 186 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f--~t~Ls~Ey~~~~~-~~l~~~~l~-~l~~nai~~sF~~~ 186 (203)
+.++++|++++++||.|... ..++-.++..+.. .++|..+.. ....|+.+..++++
T Consensus 315 ~~~~~~Gv~~~lgsD~~~~~~~~~~l~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg~~~ 374 (419)
T 2puz_A 315 QALRDAGAEIALATDCNPGTSPLTSLLLTMNMGATLFRMTVEECLTATTRNAAKALGLLA 374 (419)
T ss_dssp HHHHHHTCCEEECCCCCSSSCCBCCHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred HHHHHCCCeEEEECCCCCCCCccccHHHHHHHhccccCCCHHHHHHHHHHHHHHHcCCCC
Confidence 88999999999999986432 2588888887777 899999854 45778888877753
No 27
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=88.83 E-value=0.64 Score=40.03 Aligned_cols=52 Identities=13% Similarity=-0.044 Sum_probs=39.5
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH-------------cCCCHHHHHH-HHHHHHHHc
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS-------------WGFTREQFKI-INLNAAEAS 182 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~-------------~~l~~~~l~~-l~~nai~~s 182 (203)
+.++++|++++++||.+.-+..++-+++..+.. .+++..++.+ .+.|+.+..
T Consensus 306 ~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 371 (439)
T 2i9u_A 306 RKYLNLGINVVLGSDISAGHTCSLFKVIAYAIQNSKIKWQESGKKDMFLSTSEAFYMATKKGGSFF 371 (439)
T ss_dssp HHHHHTTCEEEECCCBTTBCCSCHHHHHHHHHHHHHHHHHHTTSCSCCCCHHHHHHHHTHHHHTTT
T ss_pred HHHHHCCCcEEEecCCCCCCCcCHHHHHHHHHHHhccccccccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 789999999999999987455688888876542 4789998544 466766543
No 28
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=88.27 E-value=0.78 Score=39.41 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=42.4
Q ss_pred HHHHhCCCcEEEcCCCCcC-cCCChHHHHHHHHH--cCCCHHHHH-HHHHHHHHHcCCC
Q psy15247 131 QKFAKDNANFSLNSDDPTL-TGRYLNEDYQLAQS--WGFTREQFK-IINLNAAEASFQP 185 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~-f~t~Ls~Ey~~~~~--~~l~~~~l~-~l~~nai~~sF~~ 185 (203)
+.++++|++++|+||.+.. ...++-+|+..+.+ .+++..++. .++.|+.+...++
T Consensus 340 ~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~n~A~~lgl~ 398 (420)
T 2imr_A 340 PAFAAAGVEVALGTDSVASGETLNVREEVTFARQLYPGLDPRVLVRAAVKGGQRVVGGR 398 (420)
T ss_dssp HHHHHTTCCEEECCCCHHHHSCSCTHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHCCCeEEEECCCCccCCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 8899999999999999653 34678889988765 689999865 5567888776553
No 29
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=87.79 E-value=0.87 Score=39.48 Aligned_cols=56 Identities=9% Similarity=-0.043 Sum_probs=43.1
Q ss_pred HHHHhCCCcEEEcCCCCcCcC--CChHHHHHHHHH-cCCCHHHHH-HHHHHHHHHcCCCH
Q psy15247 131 QKFAKDNANFSLNSDDPTLTG--RYLNEDYQLAQS-WGFTREQFK-IINLNAAEASFQPE 186 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~--t~Ls~Ey~~~~~-~~l~~~~l~-~l~~nai~~sF~~~ 186 (203)
+.++++|++++++||.+.-+. .++..|+..+.+ .+++..++. ....|+.+...+++
T Consensus 331 ~~~~~~Gv~~~~gtD~~~~~~~~~~~~~e~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 390 (458)
T 2p9b_A 331 RQAHEAGLMIGVGTDTGMTFVPQYATWRELELLVAYAGFSPAEALHAATAVNASILGVDA 390 (458)
T ss_dssp HHHHHTTCCBCCCCCTTSTTSCTTCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCTT
T ss_pred HHHHHCCCeEEEecCCCCCCCccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCcC
Confidence 678999999999999864332 357788887777 799999964 45778888877653
No 30
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=86.98 E-value=1.3 Score=37.49 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=41.4
Q ss_pred HHHHhCCCcEEEcCCCCcCcC-CChHHHHHHHHH-------cCCCHHHHHHH-HHHHHHHcCCC
Q psy15247 131 QKFAKDNANFSLNSDDPTLTG-RYLNEDYQLAQS-------WGFTREQFKII-NLNAAEASFQP 185 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~-t~Ls~Ey~~~~~-------~~l~~~~l~~l-~~nai~~sF~~ 185 (203)
+.++++|++++++||.|.... .++-.|+..+.. .+++.+++.++ +.|+.+...++
T Consensus 265 ~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 328 (406)
T 1p1m_A 265 QRMIEHGMKVTLGTDGAASNNSLNLFFEMRLASLLQKAQNPRNLDVNTCLKMVTYDGAQAMGFK 328 (406)
T ss_dssp HHHHHTTCEEEECCCCTTTTSCCCHHHHHHHHHHHHHTTCTTSSCHHHHHHHHTHHHHHHHTCS
T ss_pred HHHHhCCCeEEEECCCCcCCCCCCHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 789999999999999987543 577777766543 26899887655 67887776654
No 31
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=86.77 E-value=0.72 Score=38.79 Aligned_cols=54 Identities=15% Similarity=0.057 Sum_probs=39.7
Q ss_pred HHHHhCCC--cEEEcCCCC-cC--c-CCChHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCC
Q psy15247 131 QKFAKDNA--NFSLNSDDP-TL--T-GRYLNEDYQLAQSWGFTREQFKII-NLNAAEASFQ 184 (203)
Q Consensus 131 ~~l~~~Gv--~vsinTDDp-~~--f-~t~Ls~Ey~~~~~~~l~~~~l~~l-~~nai~~sF~ 184 (203)
+.++++|+ +++|+||.| +. . ..++..|+..+.+.+++.+++.++ ..|+.+.-.+
T Consensus 260 ~~~~~~g~~d~v~lgTD~p~~~~~~~~g~~~~~~~~~~~~~ls~~~~~~~~T~n~A~~lgl 320 (386)
T 2vun_A 260 RRAAEKGQLGRVIFGNDAPSGTGLIPLGILRNMCQIASMSDIDPEVAVCMATGNSTAVYGL 320 (386)
T ss_dssp HHHHHHTCGGGEEEECCBSBTTBBCTTHHHHHHHHHHHHSCCCHHHHHHHHTHHHHHHHTC
T ss_pred HHHHHcCCCceeEEecCCCCCCCCCcchhHHHHHHHHhhcCCCHHHHHHHHhHHHHHHcCC
Confidence 88999999 999999997 32 1 124667776654489999998666 6777776543
No 32
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=84.18 E-value=0.94 Score=38.83 Aligned_cols=55 Identities=9% Similarity=0.116 Sum_probs=38.1
Q ss_pred HHHHhCCCcEEEcCCCCc-----CcCCChHHHHHHHHH-cCC----CHHH-HHHHHHHHHHHcCCC
Q psy15247 131 QKFAKDNANFSLNSDDPT-----LTGRYLNEDYQLAQS-WGF----TREQ-FKIINLNAAEASFQP 185 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~-----~f~t~Ls~Ey~~~~~-~~l----~~~~-l~~l~~nai~~sF~~ 185 (203)
+.++++|++++|+||.+. ....++-+++..+.. ..+ +..+ ++.++.|+.+...++
T Consensus 303 ~~~~~~Gv~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~ 368 (430)
T 1ra0_A 303 KEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQ 368 (430)
T ss_dssp HHHHHTTCCEEECCBCSSBTTBSCCCCCHHHHHHHHHHHTTCCSHHHHHGGGGGGTHHHHHHTTCS
T ss_pred HHHHHCCCEEEEeCCCCcccCCCCCCCCHHHHHHHHHHHHccCCcccHHHHHHHHHHHHHHHhCCC
Confidence 789999999999999974 233578888877666 443 4444 445566777665543
No 33
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=81.20 E-value=2.8 Score=36.62 Aligned_cols=56 Identities=13% Similarity=0.053 Sum_probs=40.8
Q ss_pred HHHHhCCCc--EEEcCCCCcCcCCChHHHHHHHHH-------------------------cCCCHHH-HHHHHHHHHHHc
Q psy15247 131 QKFAKDNAN--FSLNSDDPTLTGRYLNEDYQLAQS-------------------------WGFTREQ-FKIINLNAAEAS 182 (203)
Q Consensus 131 ~~l~~~Gv~--vsinTDDp~~f~t~Ls~Ey~~~~~-------------------------~~l~~~~-l~~l~~nai~~s 182 (203)
+.++++|++ ++++||.+.....++-.+...+.. .+++..+ ++.++.|+.+..
T Consensus 310 ~~~~~~Gv~~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 389 (475)
T 2ood_A 310 GRATDPEHRVKMSFGTDVGGGNRFSMISVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVTLGGAEGL 389 (475)
T ss_dssp HHHTCTTSCCEEEECCCBTTBSCCCHHHHHHHHHHHHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHHHHHTTHHHHHHT
T ss_pred HHHHhCCCCCcEEEEccCCCCCCcCHHHHHHHHHHHhcccchhccCCcccccccccccccCCCCHHHHHHHHHHHHHHHh
Confidence 788999999 999999987444566666554421 3688888 556678888887
Q ss_pred CCCH
Q psy15247 183 FQPE 186 (203)
Q Consensus 183 F~~~ 186 (203)
.+++
T Consensus 390 gl~~ 393 (475)
T 2ood_A 390 YIDD 393 (475)
T ss_dssp TCTT
T ss_pred CCCC
Confidence 7653
No 34
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=80.59 E-value=1.2 Score=38.76 Aligned_cols=55 Identities=7% Similarity=-0.017 Sum_probs=38.9
Q ss_pred HHHHhCCCcEEEcCCCCcC-cCCChHHHHHHHHH-----------------------cCCCHHHH-HHHHHHHHHHcCCC
Q psy15247 131 QKFAKDNANFSLNSDDPTL-TGRYLNEDYQLAQS-----------------------WGFTREQF-KIINLNAAEASFQP 185 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~-f~t~Ls~Ey~~~~~-----------------------~~l~~~~l-~~l~~nai~~sF~~ 185 (203)
+.++++|++++++||.|.. ...++-+++..+.. .+++..++ +....|+.+...++
T Consensus 322 ~~~~~~Gv~v~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lgl~ 401 (492)
T 2paj_A 322 REMADAGVPVSIGVDGAASNEAADMISEVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGLD 401 (492)
T ss_dssp TTHHHHTCCEEECCCHHHHCSCCSHHHHHHHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHHHTCT
T ss_pred HHHHHCCCcEEEeCCCCCCCCCCCHHHHHHHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhCCC
Confidence 7899999999999999864 34678888765432 23777775 44467777776654
No 35
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=78.15 E-value=2.5 Score=33.84 Aligned_cols=56 Identities=20% Similarity=0.136 Sum_probs=45.3
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHHcCCCHHHHHH-HHHHHHHHcCCCH
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQSWGFTREQFKI-INLNAAEASFQPE 186 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~~~l~~~~l~~-l~~nai~~sF~~~ 186 (203)
+.++++|+++.++||-+.....++..++..+.+.|+|..+..+ ++.|+.+.-.+++
T Consensus 304 ~~~~~~g~~~~~gt~~~~~~~~~~~~~~~~~~~~gls~~eal~~~T~npA~~lgl~~ 360 (403)
T 3mtw_A 304 RKALKAGVKMVYGTDAGIYPHGDNAKQFAVMVRYGATPLQAIQSATLTAAEALGRSK 360 (403)
T ss_dssp HHHHHHTCEEECCCCBTTBCTTCGGGHHHHHHHTTCCHHHHHHHTTHHHHHHHTCTT
T ss_pred hHHHhcCCeEeeccCCcccccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 8889999999999999888778888888887778999888544 4577777766643
No 36
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=59.28 E-value=14 Score=28.99 Aligned_cols=45 Identities=16% Similarity=-0.064 Sum_probs=35.0
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH-cCCCHHHHHHHH
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS-WGFTREQFKIIN 175 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~-~~l~~~~l~~l~ 175 (203)
+...+.|+||+||||--.-++..=.++-..+.. +||+.+++++..
T Consensus 154 ~l~k~~g~~ivisSDAh~~~~v~~~~~~~~l~~~~G~~~e~~~~~l 199 (212)
T 1v77_A 154 KLVEKYKVRRFLTSSAQEKWDVRYPRDLISLGVVIGMEIPQAKASI 199 (212)
T ss_dssp HHHHHHTCCEEEECCCSSGGGCCCHHHHHHHHHHTTCCHHHHHHTT
T ss_pred HHHHhcCCCEEEeCCCCChhhcCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 445677999999999998888755556666677 999999876644
No 37
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=56.23 E-value=92 Score=26.58 Aligned_cols=88 Identities=6% Similarity=-0.034 Sum_probs=56.8
Q ss_pred HHHHHHCCceEEEEccCcc-chhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcC--ceEEEEEeecCCCCcccHHHHHH
Q psy15247 22 IEDCSKNNVAYVEVRYMPH-KLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQ--VKSKSILSCATKWPVDTVPDTLR 98 (203)
Q Consensus 22 ~~~~~~dgV~Y~Elr~~P~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--i~~rlI~~~~R~~~~e~a~~~~~ 98 (203)
++.+.+-|+..+-+..+-. .+... -+.+.+++++.+.+.++.+++. | +.+.+-+...-..+++.+.++++
T Consensus 80 i~~a~~~g~~~v~i~~~~s~~~~~~------~~~s~~e~l~~~~~~v~~ak~~-g~~~~v~~~~ed~~~~~~~~~~~~~~ 152 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGTSKYLRAP------HGRDIPRIIEEAKEVIAYIREA-APHVEVRFSAEDTFRSEEQDLLAVYE 152 (382)
T ss_dssp HHHHHHTTCSEEEEEECC--------------CCCHHHHHHHHHHHHHHHHHH-CTTSEEEEEETTTTTSCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeccCHHHHHH------hCCCHHHHHHHHHHHHHHHHHc-CCCEEEEEEEEeCCCCCHHHHHHHHH
Confidence 4556667999888776522 11112 2689999999999998877654 6 66665544322235667888888
Q ss_pred HHHhhCCCceEEEeCCCCC
Q psy15247 99 LAQNCTHYGVVGIDLLSIQ 117 (203)
Q Consensus 99 ~a~~~~~~~vvG~dL~G~E 117 (203)
.+.+. .+.|.=-|..|-=
T Consensus 153 ~~~~~-a~~i~l~DT~G~~ 170 (382)
T 2ztj_A 153 AVAPY-VDRVGLADTVGVA 170 (382)
T ss_dssp HHGGG-CSEEEEEETTSCC
T ss_pred HHHHh-cCEEEecCCCCCC
Confidence 88777 6656666777754
No 38
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=55.43 E-value=1e+02 Score=26.68 Aligned_cols=61 Identities=7% Similarity=-0.034 Sum_probs=40.7
Q ss_pred CCCCHHHHHHHHHHHHHHhHhhcC-ceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEeCCCC
Q psy15247 52 GYEGLKETVRRVYQGLKRGEDEFQ-VKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGIDLLSI 116 (203)
Q Consensus 52 ~~~~~~~~~~~v~~~~~~~~~~~~-i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~ 116 (203)
++.+.+++++++....+ ..+. +.+-+|+.+.. .+.++..++++.+.+..++.|.-+.|...
T Consensus 184 R~~~~~~~~~ai~~~r~---~G~~~v~~dlI~GlPg-et~e~~~~tl~~~~~l~~~~i~~y~l~~~ 245 (457)
T 1olt_A 184 REQDEEFIFALLNHARE---IGFTSTNIDLIYGLPK-QTPESFAFTLKRVAELNPDRLSVFNYAHL 245 (457)
T ss_dssp CCCCHHHHHHHHHHHHH---TTCCSCEEEEEESCTT-CCHHHHHHHHHHHHHHCCSEEEEEECCCC
T ss_pred CCCCHHHHHHHHHHHHH---cCCCcEEEEEEcCCCC-CCHHHHHHHHHHHHhcCcCEEEeecCcCC
Confidence 45677766666554432 1233 55677777654 46778899999999988887777777643
No 39
>3nzt_A Glutamate--cysteine ligase; structural genomics, center for structural genomics of infec diseases, csgid, alpha and beta proteins; HET: AMP; 2.00A {Francisella tularensis subsp}
Probab=48.59 E-value=16 Score=33.17 Aligned_cols=28 Identities=0% Similarity=-0.147 Sum_probs=19.3
Q ss_pred cCCChHHHHHHHHH-cCCCHHHHHHHHHH
Q psy15247 150 TGRYLNEDYQLAQS-WGFTREQFKIINLN 177 (203)
Q Consensus 150 f~t~Ls~Ey~~~~~-~~l~~~~l~~l~~n 177 (203)
|+..++.+|..... ..++......+..-
T Consensus 463 f~l~la~~~~~~~~~~~~~~~~~~~~~~~ 491 (525)
T 3nzt_A 463 FILDISRRVSQQFRSYELPAAIVAKLKDQ 491 (525)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 66788999988777 77777654444433
No 40
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=47.51 E-value=32 Score=28.16 Aligned_cols=112 Identities=13% Similarity=0.133 Sum_probs=70.4
Q ss_pred CCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHHHHHH----HhhCCCceEEEeCCCCCCCcccccccc
Q psy15247 52 GYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDTLRLA----QNCTHYGVVGIDLLSIQPETGPHGSVY 127 (203)
Q Consensus 52 ~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~~~~a----~~~~~~~vvG~dL~G~EpE~~gHG~l~ 127 (203)
|++....+++-+++.. + .+-+|.+|.+-+...- +++++.+..... ..+.|+.++-+.=.+.-|
T Consensus 12 GNigts~~idl~LDEr--A-dRedI~vrv~gsGaKm-~pe~~~~~~~~~~~~~~~~~pDfvI~isPN~a~P--------- 78 (283)
T 1qv9_A 12 GNLGTSMMMDMLLDER--A-DREDVEFRVVGTSVKM-DPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAP--------- 78 (283)
T ss_dssp SCCHHHHHTTGGGSTT--S-CCSSEEEEEEECTTCC-SHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSH---------
T ss_pred cccchHHHHHHHHHhh--h-ccCCceEEEeccCCCC-CHHHHHHHHHHhhhhhhhcCCCEEEEECCCCCCC---------
Confidence 3566666666665543 2 2347999999888774 566777666554 688888777665433310
Q ss_pred ccc---H-HHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH-cC----------------CCHHHHHHHHHHHHHHc
Q psy15247 128 SYN---Q-KFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS-WG----------------FTREQFKIINLNAAEAS 182 (203)
Q Consensus 128 ~~p---~-~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~-~~----------------l~~~~l~~l~~nai~~s 182 (203)
=| | .|-+.|+|+.|=||+|+.=. -+++. .+ || |+..++...+-+.++--
T Consensus 79 -GP~~ARE~l~~~~iP~IvI~D~p~~K~---kd~l~--~~g~GYIivk~DpMIGArREFLDP~EMa~fNaDv~kVL 148 (283)
T 1qv9_A 79 -GPSKAREMLADSEYPAVIIGDAPGLKV---KDEME--EQGLGYILVKPDAMLGARREFLDPVEMAIYNADLMKVL 148 (283)
T ss_dssp -HHHHHHHHHHTSSSCEEEEEEGGGGGG---HHHHH--HTTCEEEEETTSCCCCCCTTTCCHHHHHHHHHHHHHHH
T ss_pred -CchHHHHHHHhCCCCEEEEcCCcchhh---HHHHH--hcCCcEEEEecCccccchhhccCHHHHHHhhhhHHHHH
Confidence 13 3 45589999999999997652 22221 12 44 67777777776666543
No 41
>2ibo_A Hypothetical protein SP2199; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Streptococcus pneumoniae TIGR4} SCOP: d.58.48.1
Probab=44.83 E-value=76 Score=22.07 Aligned_cols=51 Identities=12% Similarity=0.027 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHh
Q psy15247 11 LDAVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGED 72 (203)
Q Consensus 11 ~~~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 72 (203)
.+.+.....++++-+.+.|+.| +.+|..-+-.| +.+++++++-+..+...+
T Consensus 15 ~~svs~~Va~~i~vl~~sGl~y---~~~pmgT~IEG--------e~devm~vv~~~~e~~~~ 65 (104)
T 2ibo_A 15 GIDRIAVIDQVIAYLQTQEVTM---VVTPFETVLEG--------EFDELMRILKEALEVAGQ 65 (104)
T ss_dssp SHHHHHHHHHHHHHHHHSSSEE---EECSSCEEEEE--------EHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHHcCCCe---EecCCccEEEc--------CHHHHHHHHHHHHHHHHc
Confidence 3568888899999999999999 67887655552 689999988888776665
No 42
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=44.55 E-value=1.1e+02 Score=24.04 Aligned_cols=77 Identities=17% Similarity=0.120 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEeCCCCCCCccccccccccc--HHHHhC
Q psy15247 59 TVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQPETGPHGSVYSYN--QKFAKD 136 (203)
Q Consensus 59 ~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~EpE~~gHG~l~~~p--~~l~~~ 136 (203)
+...+.++++++.++.|+.+. ++..-..+++...+.++..+....++|+......++ . -+ +.+.+.
T Consensus 14 ~~~~~~~gi~~~~~~~g~~~~--~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~--~--------~~~~~~~~~~ 81 (313)
T 2h3h_A 14 YWSQVEQGVKAAGKALGVDTK--FFVPQKEDINAQLQMLESFIAEGVNGIAIAPSDPTA--V--------IPTIKKALEM 81 (313)
T ss_dssp HHHHHHHHHHHHHHHHTCEEE--EECCSSSCHHHHHHHHHHHHHTTCSEEEECCSSTTT--T--------HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCEEE--EECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHH--H--------HHHHHHHHHC
Confidence 777888899888888887643 332113344444556666665545566554332221 0 12 566789
Q ss_pred CCcE-EEcCCCC
Q psy15247 137 NANF-SLNSDDP 147 (203)
Q Consensus 137 Gv~v-sinTDDp 147 (203)
|+|| +++++.|
T Consensus 82 ~iPvV~~~~~~~ 93 (313)
T 2h3h_A 82 GIPVVTLDTDSP 93 (313)
T ss_dssp TCCEEEESSCCT
T ss_pred CCeEEEeCCCCC
Confidence 9996 4555544
No 43
>1vk8_A Hypothetical protein TM0486; protein with possible role in cell WALL biogenesis, structur genomics, joint center for structural genomics; HET: UNL; 1.80A {Thermotoga maritima} SCOP: d.58.48.1
Probab=43.58 E-value=81 Score=22.11 Aligned_cols=63 Identities=17% Similarity=0.113 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEee
Q psy15247 10 DLDAVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSC 84 (203)
Q Consensus 10 t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~ 84 (203)
+.+.+.....++++-+.+.|+.| +.+|..-+-.| +.+++++++-+..+... ....++-..+-+
T Consensus 27 ~~~svs~~Va~~i~vi~~sGL~y---~~~pmgT~IEG--------e~devm~vvk~~~e~~~-~g~~RV~t~iKI 89 (106)
T 1vk8_A 27 EDGRLHEVIDRAIEKISSWGMKY---EVGPSNTTVEG--------EFEEIMDRVKELARYLE-QFAKRFVLQLDI 89 (106)
T ss_dssp CGGGHHHHHHHHHHHHHTTCSCE---EECSSCEEEEE--------CHHHHHHHHHHHHHHHT-TTCSEEEEEEEE
T ss_pred CCCchHHHHHHHHHHHHHcCCCe---EeCCCccEEEc--------CHHHHHHHHHHHHHHHH-cCCCEEEEEEEE
Confidence 34778889999999999999999 67787655552 68999998888777665 433445444444
No 44
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=43.03 E-value=45 Score=26.95 Aligned_cols=41 Identities=12% Similarity=0.110 Sum_probs=30.4
Q ss_pred HHHHhCCCcEEEcCCCCcCc--CCChHHHHHHHHH-cCCCHHHH
Q psy15247 131 QKFAKDNANFSLNSDDPTLT--GRYLNEDYQLAQS-WGFTREQF 171 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f--~t~Ls~Ey~~~~~-~~l~~~~l 171 (203)
+.+++.|++++++||-=... ...+.+-+..+.+ +|.....-
T Consensus 180 ~~~~~~gl~~~igSDaH~~~~r~~~~~~a~~~l~~~~G~~~a~~ 223 (262)
T 3qy7_A 180 LRLVEANLIHFVASDAHNVKTRNFHTQEALYVLEKEFGSELPYM 223 (262)
T ss_dssp HHHHHTTCCCEEECCBCSSSSSCCCHHHHHHHHHHHHCSHHHHH
T ss_pred HHHHhCCCeEEEEccCCCCCCCCchHHHHHHHHHHHhCHHHHHH
Confidence 78889999999999944333 3567777777777 78765553
No 45
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=40.33 E-value=26 Score=30.10 Aligned_cols=53 Identities=9% Similarity=-0.130 Sum_probs=33.6
Q ss_pred HHHHhCCCcEEEcCCCCcCcC------------------CChHHHHHHHHH-cCCCHHHHHHH-HHHHHHHcCC
Q psy15247 131 QKFAKDNANFSLNSDDPTLTG------------------RYLNEDYQLAQS-WGFTREQFKII-NLNAAEASFQ 184 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~------------------t~Ls~Ey~~~~~-~~l~~~~l~~l-~~nai~~sF~ 184 (203)
..++++|++++|+||.+.... +.+...+. ... .+++.+++.++ ..|+.+.--+
T Consensus 302 ~~~l~~Gv~~~lgTD~~~~~~~~k~~~~~~~~~g~~~~e~~~~~~~~-~~~~~~ls~~~~l~~~T~~~A~~lgl 374 (452)
T 2gwn_A 302 RAAVRNGRIDIIATDHAPHLLREKEGSCLQAASGGPLVQHSLLALLE-LCNQGIFSIEEIVSKTAHIPATLFAI 374 (452)
T ss_dssp HHHHHHSSSCEEECCBCCCCHHHHCSCTTTSCCCCCCTTTHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHHHTB
T ss_pred HHHHHCCCceEEEeCCCCCChHHhcCChhhCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHHhHhHHHHcCC
Confidence 789999999999999853211 11222222 334 68898886544 5676665444
No 46
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=39.70 E-value=1.5e+02 Score=24.04 Aligned_cols=154 Identities=14% Similarity=0.120 Sum_probs=92.0
Q ss_pred HHHHHHCCceEEEEccCcc-chhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeec-------CCCCcccH
Q psy15247 22 IEDCSKNNVAYVEVRYMPH-KLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCA-------TKWPVDTV 93 (203)
Q Consensus 22 ~~~~~~dgV~Y~Elr~~P~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~-------R~~~~e~a 93 (203)
++.+.+-|+..+=+..+.. .|.... -+.+.++.++.+.+.++.+++ .|+.++.-++.. | .+++..
T Consensus 86 i~~a~~ag~~~v~i~~~~sd~~~~~~-----~~~~~~e~l~~~~~~i~~a~~-~G~~v~~~l~~~~~~~~~~~-~~~~~~ 158 (298)
T 2cw6_A 86 FEAAVAAGAKEVVIFGAASELFTKKN-----INCSIEESFQRFDAILKAAQS-ANISVRGYVSCALGCPYEGK-ISPAKV 158 (298)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHH-----HSCCHHHHHHHHHHHHHHHHH-TTCEEEEEEETTTCBTTTBS-CCHHHH
T ss_pred HHHHHHCCCCEEEEEecCCHHHHHHH-----hCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEEEeeCCcCCC-CCHHHH
Confidence 5566677888877765422 122211 147899999999999987765 577766555432 4 356677
Q ss_pred HHHHHHHHhhCCCceEEEeCCCCC-C-----------Cccc------cc-cccc--cc--HHHHhCCCcEEEcCCC----
Q psy15247 94 PDTLRLAQNCTHYGVVGIDLLSIQ-P-----------ETGP------HG-SVYS--YN--QKFAKDNANFSLNSDD---- 146 (203)
Q Consensus 94 ~~~~~~a~~~~~~~vvG~dL~G~E-p-----------E~~g------HG-~l~~--~p--~~l~~~Gv~vsinTDD---- 146 (203)
.++++.+.+.-.+.|.=-|-.|-- | +..+ |+ .-+- .. -.-+++|+...=+|-.
T Consensus 159 ~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~ 238 (298)
T 2cw6_A 159 AEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGG 238 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBTTSCCC
T ss_pred HHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeecccccC
Confidence 788887777755556666777755 5 1111 44 0000 01 4557889876555544
Q ss_pred ----CcCcCCChHHHHHHHHH-c----CCCHHHHHHHHHHHHHHc
Q psy15247 147 ----PTLTGRYLNEDYQLAQS-W----GFTREQFKIINLNAAEAS 182 (203)
Q Consensus 147 ----p~~f~t~Ls~Ey~~~~~-~----~l~~~~l~~l~~nai~~s 182 (203)
|+-.++.-+++...+.. . |++.+.|..+.+.--+.+
T Consensus 239 cp~a~g~aGN~~~E~lv~~l~~~g~~~~idl~~l~~~~~~~~~~~ 283 (298)
T 2cw6_A 239 CPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQAL 283 (298)
T ss_dssp CTTSCSSCCBCBHHHHHHHHHHHTCBCCCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCcCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHH
Confidence 11234555566655544 3 577888888776555444
No 47
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=39.37 E-value=1.5e+02 Score=23.92 Aligned_cols=149 Identities=10% Similarity=-0.011 Sum_probs=86.0
Q ss_pred HHHHHHHCCceEEEEccCc-cchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEee-------cCCCCccc
Q psy15247 21 FIEDCSKNNVAYVEVRYMP-HKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSC-------ATKWPVDT 92 (203)
Q Consensus 21 ~~~~~~~dgV~Y~Elr~~P-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~-------~R~~~~e~ 92 (203)
-++.+.+-|+..+=+..+. ..|... .-+.+.++.++.+.+.++.+++ .|+.+..-++. .| .+++.
T Consensus 84 ~i~~a~~~G~~~V~i~~~~S~~h~~~-----~~~~~~~e~~~~~~~~v~~a~~-~G~~V~~~l~~~~~~e~~~~-~~~~~ 156 (295)
T 1ydn_A 84 GYEAAAAAHADEIAVFISASEGFSKA-----NINCTIAESIERLSPVIGAAIN-DGLAIRGYVSCVVECPYDGP-VTPQA 156 (295)
T ss_dssp HHHHHHHTTCSEEEEEEESCHHHHHH-----HTSSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECSSEETTTEE-CCHHH
T ss_pred HHHHHHHCCCCEEEEEEecCHHHHHH-----HcCCCHHHHHHHHHHHHHHHHH-cCCeEEEEEEEEecCCcCCC-CCHHH
Confidence 3456666788877665321 112221 1257999999999999887765 57777633332 24 35678
Q ss_pred HHHHHHHHHhhCCCceEEEeCCCCC-C-----------Ccc---c---cc-cccccc----HHHHhCCCcEEEcCCCC--
Q psy15247 93 VPDTLRLAQNCTHYGVVGIDLLSIQ-P-----------ETG---P---HG-SVYSYN----QKFAKDNANFSLNSDDP-- 147 (203)
Q Consensus 93 a~~~~~~a~~~~~~~vvG~dL~G~E-p-----------E~~---g---HG-~l~~~p----~~l~~~Gv~vsinTDDp-- 147 (203)
+.+.++.+.+.-.+.|.=-|-.|-- | +.. + || .-.-.+ ..-+++|+...=+|-.+
T Consensus 157 ~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~sv~GlG 236 (295)
T 1ydn_A 157 VASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASVGGLG 236 (295)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEBTTCCS
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEeccccCC
Confidence 8888888777754545444666654 4 111 1 55 100011 45667888655444433
Q ss_pred ------cCcCCChHHHHHHHHH-c----CCCHHHHHHHHH
Q psy15247 148 ------TLTGRYLNEDYQLAQS-W----GFTREQFKIINL 176 (203)
Q Consensus 148 ------~~f~t~Ls~Ey~~~~~-~----~l~~~~l~~l~~ 176 (203)
+--++.-+++...+.. . |++.+.|..+.+
T Consensus 237 ~cp~a~g~~GN~~~e~lv~~l~~~g~~~~id~~~l~~~~~ 276 (295)
T 1ydn_A 237 GCPFAPGAKGNVDTVAVVEMLHEMGFETGLDLDRLRSAGL 276 (295)
T ss_dssp CBTTBTTSCCBCBHHHHHHHHHHTTCBCCCCHHHHHHHHH
T ss_pred CCCCCCCCcCChhHHHHHHHHHhcCCCCCcCHHHHHHHHH
Confidence 1234444666655555 4 567777766665
No 48
>4f0h_A Ribulose bisphosphate carboxylase large chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_A 4f0m_A 1bwv_A* 1iwa_A 1bxn_A
Probab=38.83 E-value=1.2e+02 Score=27.12 Aligned_cols=86 Identities=16% Similarity=0.111 Sum_probs=56.6
Q ss_pred CCHHHHHHHHHHHHHHHHHCCceEE---EEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeec
Q psy15247 9 GDLDAVERFAYEFIEDCSKNNVAYV---EVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCA 85 (203)
Q Consensus 9 ~t~~~l~~~~~~~~~~~~~dgV~Y~---Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~ 85 (203)
-+++.+.+++|+++ .-|+-++ |.-.++.+ .++++-+..+.++++++++++|- .++...-.
T Consensus 189 Ls~~~~a~~~ye~~----~GGlDfIKDDE~l~~Qpf------------~p~~eRv~~v~eai~rA~~eTGe-~K~~~~Ni 251 (493)
T 4f0h_A 189 LSGKNYGRVVYEAL----KGGLDFVKDDENINSQPF------------MRWRERYLFVMEAVNKAAAATGE-VKGHYLNV 251 (493)
T ss_dssp CCHHHHHHHHHHHH----HHTCSEEECCTTCSSBTT------------BCHHHHHHHHHHHHHHHHHHHSS-CCEEEEEC
T ss_pred CCHHHHHHHHHHHH----hcCCCccccccccCCCCC------------ccHHHHHHHHHHHHHHHHHhHCC-cceEEeec
Confidence 37888888877765 5677776 66666432 36788999999999999999883 33333222
Q ss_pred CCCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 86 TKWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 86 R~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
...+.++..+-.+.+++.-.+ .+=+|
T Consensus 252 Ta~~~~eM~~Ra~~a~e~G~~-~vmvd 277 (493)
T 4f0h_A 252 TAATMEEMYARAQLAKELGSV-IIMID 277 (493)
T ss_dssp CCSSHHHHHHHHHHHHHHTCS-EEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCC-eEEEe
Confidence 223455666777777776433 34344
No 49
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=38.05 E-value=60 Score=27.58 Aligned_cols=31 Identities=13% Similarity=0.202 Sum_probs=24.0
Q ss_pred HHHHhCCCcEEEcCCCCcC-cCCChHHHHHHHHH
Q psy15247 131 QKFAKDNANFSLNSDDPTL-TGRYLNEDYQLAQS 163 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~-f~t~Ls~Ey~~~~~ 163 (203)
+.+ +||+|+++||.+.- ...++-.++..+..
T Consensus 294 ~~~--~Gv~v~lgtD~~~~~~~~~~~~~~~~a~~ 325 (427)
T 3v7p_A 294 EKI--KSIPYAIATDGLSSNYSLNMYEELKAALF 325 (427)
T ss_dssp TTT--TTSCEEECCCCTTSCSCCCHHHHHHHHHH
T ss_pred HHH--CCCeEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 556 99999999997643 34678888877766
No 50
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=37.52 E-value=1.5e+02 Score=23.29 Aligned_cols=55 Identities=13% Similarity=0.089 Sum_probs=34.8
Q ss_pred cHHHHHHH-HHhhCCCceEEEeCCCCC----CCccc-----------------------cc-cccc--cc-----HHHHh
Q psy15247 92 TVPDTLRL-AQNCTHYGVVGIDLLSIQ----PETGP-----------------------HG-SVYS--YN-----QKFAK 135 (203)
Q Consensus 92 ~a~~~~~~-a~~~~~~~vvG~dL~G~E----pE~~g-----------------------HG-~l~~--~p-----~~l~~ 135 (203)
.+.+.+.. ..+++|+.|+-+|++|.- +|..+ .| +-+. .| +.+.+
T Consensus 49 ~~~~~l~~~i~~~~Pd~vi~~G~a~gr~~i~~Er~A~N~~~~r~pDn~G~~p~~~~i~~~gp~~~~t~Lpv~~iv~~l~~ 128 (216)
T 4gxh_A 49 TSLEHLYAAVDKYQPELVISVGQAGGRTNITVERVAININDARIPDNAGNQPIDTPVIVDGPAAYFSRLPIKTMVNALNT 128 (216)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEEECTTCSSEEEECEEESCBCCSSCCTTSCCCCSBCSSTTCCSEEECCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEeccCCCCCcceeEEEEcccCcccCCccCCCCCCCCcccCCCchheecCCCHHHHHHHHHH
Confidence 45555544 345678899999999765 23321 11 1111 35 78889
Q ss_pred CCCcEEEcCCC
Q psy15247 136 DNANFSLNSDD 146 (203)
Q Consensus 136 ~Gv~vsinTDD 146 (203)
+|+|++++.|-
T Consensus 129 ~gipa~vS~dA 139 (216)
T 4gxh_A 129 AGIPASVSQTA 139 (216)
T ss_dssp TTCCEEEESCC
T ss_pred CCCCEEEeCCC
Confidence 99999996654
No 51
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=36.48 E-value=1.5e+02 Score=23.20 Aligned_cols=74 Identities=9% Similarity=-0.091 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEeCCCCCCCccccccccccc--HHHHhC
Q psy15247 59 TVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQPETGPHGSVYSYN--QKFAKD 136 (203)
Q Consensus 59 ~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~EpE~~gHG~l~~~p--~~l~~~ 136 (203)
+...+.++++++.++.|+.+-+. .. ..+++...+.++.++....++|+-.....+. . -+ +.+.+.
T Consensus 16 ~~~~~~~gi~~~a~~~g~~~~~~--~~-~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~---~-------~~~~~~~~~~ 82 (313)
T 3m9w_A 16 RWQKDRDIFVKKAESLGAKVFVQ--SA-NGNEETQMSQIENMINRGVDVLVIIPYNGQV---L-------SNVVKEAKQE 82 (313)
T ss_dssp TTHHHHHHHHHHHHHTSCEEEEE--EC-TTCHHHHHHHHHHHHHTTCSEEEEECSSTTS---C-------HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCEEEEE--CC-CCCHHHHHHHHHHHHHcCCCEEEEeCCChhh---h-------HHHHHHHHHC
Confidence 44566777777777778665443 33 3344445566777776666777665544332 0 02 667778
Q ss_pred CCcEEE-cCC
Q psy15247 137 NANFSL-NSD 145 (203)
Q Consensus 137 Gv~vsi-nTD 145 (203)
|+||.+ +++
T Consensus 83 ~iPvV~~~~~ 92 (313)
T 3m9w_A 83 GIKVLAYDRM 92 (313)
T ss_dssp TCEEEEESSC
T ss_pred CCeEEEECCc
Confidence 888654 443
No 52
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=36.30 E-value=41 Score=30.06 Aligned_cols=55 Identities=13% Similarity=0.204 Sum_probs=37.8
Q ss_pred cc-HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH-------cCCCHHH-HHHHHHHHHHHcCCC
Q psy15247 129 YN-QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS-------WGFTREQ-FKIINLNAAEASFQP 185 (203)
Q Consensus 129 ~p-~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~-------~~l~~~~-l~~l~~nai~~sF~~ 185 (203)
+| +.++++ |+|+++||-|.- ..+.-.+.+.+.. .++|..+ |+....|+.+..+.+
T Consensus 418 ~p~~~l~~~-v~valGSD~p~~-~~~p~~~~~~av~r~~~~~~~~ls~~eaL~~~T~~~A~~lg~e 481 (534)
T 3icj_A 418 YRLKTLSSI-TKLGFSTDSPIE-PADPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAE 481 (534)
T ss_dssp TCHHHHHHH-SCEEECCTTTTS-CCCHHHHHHHHHHCCSSCGGGCCCHHHHHHHTTHHHHHHTTCT
T ss_pred HHHHHHHHh-CCEEeecCCCCC-CCCHHHHHHHHHhccccCcccCCCHHHHHHHHHHHHHHHhCCC
Confidence 35 889999 999999999843 3444444444332 4678777 556668888877764
No 53
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=35.88 E-value=1.5e+02 Score=22.84 Aligned_cols=77 Identities=8% Similarity=0.084 Sum_probs=46.8
Q ss_pred HHHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHHH
Q psy15247 18 AYEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDTL 97 (203)
Q Consensus 18 ~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~~ 97 (203)
..+.++.+++-|..++|++... . .. +.+.+ .+ +.+++.-+++|+.+-.+-.... ...+...+.+
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~--~-~~-------~~~~~-~~----~~~~~~l~~~gl~i~~~~~~~~-~~~~~~~~~i 95 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFH--L-PL-------NSTDE-QI----RAFHDKCAAHKVTGYAVGPIYM-KSEEEIDRAF 95 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTT--S-CT-------TCCHH-HH----HHHHHHHHHTTCEEEEEEEEEE-CSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeccc--C-CC-------CCCHH-HH----HHHHHHHHHcCCeEEEEecccc-CCHHHHHHHH
Confidence 4578888999999999999761 1 11 23432 22 3344444567877654433222 3455667777
Q ss_pred HHHHhhCCCceEE
Q psy15247 98 RLAQNCTHYGVVG 110 (203)
Q Consensus 98 ~~a~~~~~~~vvG 110 (203)
+.|...-.+.|++
T Consensus 96 ~~A~~lGa~~v~~ 108 (257)
T 3lmz_A 96 DYAKRVGVKLIVG 108 (257)
T ss_dssp HHHHHHTCSEEEE
T ss_pred HHHHHhCCCEEEe
Confidence 8887775555654
No 54
>1u7k_A GAG polyprotein; capsid, viral protein; 1.85A {Endogenous} SCOP: a.73.1.1 PDB: 2y4z_A 3bp9_A
Probab=35.11 E-value=50 Score=24.24 Aligned_cols=51 Identities=10% Similarity=0.092 Sum_probs=38.8
Q ss_pred CCCcCcC--CChHHHHHHHHH-cCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhh
Q psy15247 145 DDPTLTG--RYLNEDYQLAQS-WGFTREQFKIINLNAAEASFQPEHEKKELIKLLESEY 200 (203)
Q Consensus 145 DDp~~f~--t~Ls~Ey~~~~~-~~l~~~~l~~l~~nai~~sF~~~~~k~~l~~~~~~~~ 200 (203)
+.|+++. ..+...++-+.. +..|.+|+.+|.. +-++.++|++++.+-.+++
T Consensus 26 ~~~sfsedP~~~~~l~e~i~~th~pTW~D~qqLL~-----tLlT~EEr~ril~eArk~v 79 (131)
T 1u7k_A 26 NNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLG-----TLLTGEEKQRVLLEARKAV 79 (131)
T ss_dssp TSCCTTTCHHHHHHHHHHHHHHTCCCHHHHHHHHH-----HHSCHHHHHHHHHHHHHTC
T ss_pred cCCCcccCHHHHHHHHHHHHHhcCCCHHHHHHHHH-----HHcCHHHHHHHHHHHHHHH
Confidence 3445554 357778888888 9999999999874 3467889999988877664
No 55
>2xzm_K RPS14E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_K 3j0o_K 3j0l_K 2zkq_k 3iz6_K 3jyv_K*
Probab=34.96 E-value=1.4e+02 Score=22.39 Aligned_cols=65 Identities=11% Similarity=0.139 Sum_probs=43.6
Q ss_pred CCHHHHHHHHHHHHHHHHHCCceEEEEccC-ccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecC
Q psy15247 9 GDLDAVERFAYEFIEDCSKNNVAYVEVRYM-PHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCAT 86 (203)
Q Consensus 9 ~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~-P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R 86 (203)
+|+-+-..++.++.+.+.+.|+..+|+++. |.-....+ .|...+.++.++.. .|+.+..|-++..
T Consensus 69 sTpyAAq~aa~~~a~~a~e~Gi~~v~V~vkG~gg~~~kg-----pG~GresairaL~~--------~GlkI~~I~DvTp 134 (151)
T 2xzm_K 69 SSPYAAMQAAIDVVNRCKELKINALHIKLRAKGGVETKQ-----PGPGAQSALRALAR--------SGMKIGRIEDVTP 134 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCTTSCCS-----CCSHHHHHHHHHHH--------TSCEEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHHHHcCCeEEEEEEEcCCCCCccC-----CCccHHHHHHHHHH--------CCCEEEEEEEeCC
Confidence 466777788889999999999999999985 53222111 13345555555432 2788888877765
No 56
>3mhs_B Protein SUS1; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3fwc_C 3fwb_C 3kjl_A 3m99_C 3mhh_B 3kik_A 4fip_B 4fjc_B 4fk5_B
Probab=34.50 E-value=69 Score=22.05 Aligned_cols=36 Identities=8% Similarity=0.221 Sum_probs=27.4
Q ss_pred cCCCHHHHHHHHHHHHHH------------------cCCCHHHHHHHHHHHHhhh
Q psy15247 164 WGFTREQFKIINLNAAEA------------------SFQPEHEKKELIKLLESEY 200 (203)
Q Consensus 164 ~~l~~~~l~~l~~nai~~------------------sF~~~~~k~~l~~~~~~~~ 200 (203)
+||. +++++++++-++. +-.|++.|++|+.++.++.
T Consensus 36 cGW~-Devr~~~r~~i~~~~~vt~~~L~~~I~P~Ar~~VP~~VK~Ell~~Ir~fL 89 (96)
T 3mhs_B 36 EGWV-DKVKDLTKSEMNINESTNFTQILSTVEPKALEMVSDSTRETVLKQIREFL 89 (96)
T ss_dssp TTHH-HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CCcH-HHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHCCHHHHHHHHHHHHHHH
Confidence 5553 4677777777763 5699999999999998864
No 57
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=34.48 E-value=92 Score=20.04 Aligned_cols=59 Identities=24% Similarity=0.366 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHHHHH--CCceE------EEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEE
Q psy15247 10 DLDAVERFAYEFIEDCSK--NNVAY------VEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSI 81 (203)
Q Consensus 10 t~~~l~~~~~~~~~~~~~--dgV~Y------~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI 81 (203)
+.++|+....+.++++.+ --|.| +|+|.+ |.+ +++-..+.....+..++|++.+-+-
T Consensus 11 dleafekalkemirqarkfagtvtytldgndleirit--------------gvp-eqvrkelakeaerlakefnitvtyt 75 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRIT--------------GVP-EQVRKELAKEAERLAKEFNITVTYT 75 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEE--------------SCC-HHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEe--------------cCh-HHHHHHHHHHHHHHHHhcCeEEEEE
Confidence 678999999999999885 34556 577765 233 3455556566667778899887665
Q ss_pred Ee
Q psy15247 82 LS 83 (203)
Q Consensus 82 ~~ 83 (203)
+-
T Consensus 76 ir 77 (85)
T 2kl8_A 76 IR 77 (85)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 58
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=33.17 E-value=2e+02 Score=23.58 Aligned_cols=154 Identities=12% Similarity=0.022 Sum_probs=85.1
Q ss_pred HHHHHHCCceEEEEccCccc-hhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecC------CCCcccHH
Q psy15247 22 IEDCSKNNVAYVEVRYMPHK-LLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCAT------KWPVDTVP 94 (203)
Q Consensus 22 ~~~~~~dgV~Y~Elr~~P~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R------~~~~e~a~ 94 (203)
++.+.+-|+..+-+..+... +... .-+.+.++.++.+.+.++.+++ .|..++.-++..= ..+++.+.
T Consensus 87 i~~a~~~g~~~v~i~~~~sd~~~~~-----~l~~s~~e~l~~~~~~v~~ak~-~G~~v~~~i~~~~~~~~~~~~~~~~~~ 160 (307)
T 1ydo_A 87 LENALEGGINEACVFMSASETHNRK-----NINKSTSESLHILKQVNNDAQK-ANLTTRAYLSTVFGCPYEKDVPIEQVI 160 (307)
T ss_dssp HHHHHHHTCSEEEEEEESSHHHHHT-----TTCSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECTTCBTTTBCCCHHHHH
T ss_pred HHHHHhCCcCEEEEEeecCHHHHHH-----HhCCCHHHHHHHHHHHHHHHHH-CCCEEEEEEEEEecCCcCCCCCHHHHH
Confidence 44455568887777665321 2221 1257999999999999987765 4776665444321 12466777
Q ss_pred HHHHHHHhhCCCceEEEeCCCCC-C-----------Cccc------cc-cccc--cc--HHHHhCCCcEEEcCCC-----
Q psy15247 95 DTLRLAQNCTHYGVVGIDLLSIQ-P-----------ETGP------HG-SVYS--YN--QKFAKDNANFSLNSDD----- 146 (203)
Q Consensus 95 ~~~~~a~~~~~~~vvG~dL~G~E-p-----------E~~g------HG-~l~~--~p--~~l~~~Gv~vsinTDD----- 146 (203)
++++.+.+...+.|.=-|-.|-= | +..+ |+ .-+- .. -.-+++|+...=+|=.
T Consensus 161 ~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGec 240 (307)
T 1ydo_A 161 RLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGC 240 (307)
T ss_dssp HHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBGGGCCEE
T ss_pred HHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEcccccCCC
Confidence 77777777755556555777754 4 2111 44 0000 01 3455677754333322
Q ss_pred ---CcCcCCChHHHHHHHHH-c----CCCHHHHHHHHHHHHHH
Q psy15247 147 ---PTLTGRYLNEDYQLAQS-W----GFTREQFKIINLNAAEA 181 (203)
Q Consensus 147 ---p~~f~t~Ls~Ey~~~~~-~----~l~~~~l~~l~~nai~~ 181 (203)
|+--|+.-+++...+.. . |++.+.|..+.+.--+.
T Consensus 241 p~a~graGN~~~E~lv~~L~~~g~~t~idl~~L~~~~~~v~~~ 283 (307)
T 1ydo_A 241 PYAPGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEK 283 (307)
T ss_dssp TTEEEEECBCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHH
Confidence 11123444556655544 4 56777777776544443
No 59
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=33.11 E-value=38 Score=29.08 Aligned_cols=53 Identities=11% Similarity=-0.009 Sum_probs=32.2
Q ss_pred HHHHhCCCcEEEcCCCCcCcCC-----------------ChHHHHHHHHHcC-CCHHHHHHH-HHHHHHHcCC
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGR-----------------YLNEDYQLAQSWG-FTREQFKII-NLNAAEASFQ 184 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t-----------------~Ls~Ey~~~~~~~-l~~~~l~~l-~~nai~~sF~ 184 (203)
+.++++|++++++||.+..... .+...+. +.+.| ++.+++.++ ..|+.+.--+
T Consensus 336 ~~~l~~Gv~~~lgTD~~~~~~~~~~~~~~~~~g~~g~e~~l~~~l~-~~~~g~ls~~~al~~aT~n~A~~lgl 407 (467)
T 1xrt_A 336 IEGVKRGIIDCFATDHAPHQTFEKELVEFAMPGIIGLQTALPSALE-LYRKGIISLKKLIEMFTINPARIIGV 407 (467)
T ss_dssp HHHHHHTCSCEECCCBCCCCC-----------CCCCGGGHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHHHTC
T ss_pred HHHHhCCceEEEeeCCCCCChhHhcccccCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHhccCHHHHhCC
Confidence 5688999999999997643211 1222232 33444 888886554 5566665433
No 60
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=33.00 E-value=1.6e+02 Score=22.79 Aligned_cols=51 Identities=8% Similarity=-0.035 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 59 TVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 59 ~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
+...++++++++.++.|..+ +++.... +++...+.++......-++|+...
T Consensus 22 ~~~~~~~gi~~~a~~~g~~~--~~~~~~~-~~~~~~~~~~~l~~~~vdgiIi~~ 72 (287)
T 3bbl_A 22 ILDQFLSSMVREAGAVNYFV--LPFPFSE-DRSQIDIYRDLIRSGNVDGFVLSS 72 (287)
T ss_dssp THHHHHHHHHHHHHHTTCEE--EECCCCS-STTCCHHHHHHHHTTCCSEEEECS
T ss_pred hHHHHHHHHHHHHHHcCCEE--EEEeCCC-chHHHHHHHHHHHcCCCCEEEEee
Confidence 45566777777777777654 3333222 333334566666655455665544
No 61
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=32.20 E-value=1.3e+02 Score=25.00 Aligned_cols=90 Identities=11% Similarity=-0.065 Sum_probs=55.7
Q ss_pred HHHHHHHCCceEEEEccCcc-chhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEee----cCCCCcccHHH
Q psy15247 21 FIEDCSKNNVAYVEVRYMPH-KLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSC----ATKWPVDTVPD 95 (203)
Q Consensus 21 ~~~~~~~dgV~Y~Elr~~P~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~----~R~~~~e~a~~ 95 (203)
-++.+.+-|+..+-+.++-. .+.... -+.+.++.++.+.+.++.+++ .|..+++-+.. .| .+++...+
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~-----~~~s~~e~l~~~~~~v~~ak~-~G~~v~~~~~~~~~~~~-~~~~~~~~ 173 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQ-----LGKTPKEFFTDVSFVIEYAIK-SGLKINVYLEDWSNGFR-NSPDYVKS 173 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHH-----TCCCHHHHHHHHHHHHHHHHH-TTCEEEEEEETHHHHHH-HCHHHHHH
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHH-----hCCCHHHHHHHHHHHHHHHHH-CCCEEEEEEEECCCCCc-CCHHHHHH
Confidence 35566667888877776522 122211 257999999999999887765 47776644332 12 24556666
Q ss_pred HHHHHHhhCCCceEEEeCCCCC
Q psy15247 96 TLRLAQNCTHYGVVGIDLLSIQ 117 (203)
Q Consensus 96 ~~~~a~~~~~~~vvG~dL~G~E 117 (203)
+++.+.+.-.+.|.=-|-.|-=
T Consensus 174 ~~~~~~~~Ga~~i~l~DT~G~~ 195 (337)
T 3ble_A 174 LVEHLSKEHIERIFLPDTLGVL 195 (337)
T ss_dssp HHHHHHTSCCSEEEEECTTCCC
T ss_pred HHHHHHHcCCCEEEEecCCCCc
Confidence 7776666644445555667754
No 62
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=31.99 E-value=36 Score=28.56 Aligned_cols=54 Identities=15% Similarity=-0.028 Sum_probs=37.3
Q ss_pred HHHHhCC-CcEEEcCCCCcCc--C---CChHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCC
Q psy15247 131 QKFAKDN-ANFSLNSDDPTLT--G---RYLNEDYQLAQSWGFTREQFKII-NLNAAEASFQP 185 (203)
Q Consensus 131 ~~l~~~G-v~vsinTDDp~~f--~---t~Ls~Ey~~~~~~~l~~~~l~~l-~~nai~~sF~~ 185 (203)
+.++++| ++++|+||.+ .- . ..+...+..+.+.+++.+++.++ ..|+.+.--++
T Consensus 276 ~~~~~~G~~~~~lgtD~~-~~~~~g~~~~l~~~~~~~~~~~l~~~~al~~~T~n~A~~lgl~ 336 (417)
T 2ogj_A 276 EAAIARGLLPFSISTDLH-GHSMNFPVWDLATTMSKLLSVDMPFENVVEAVTRNPASVIRLD 336 (417)
T ss_dssp HHHHHTTCCCSBCCBCBS-TTTTTTTCCCHHHHHHHHHHTTCCHHHHHHTTTHHHHHHTTCC
T ss_pred HHHHHcCCCceEEEcCCC-CCccCCChhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCC
Confidence 8899999 9999999976 21 1 25656555554568999886555 56666655443
No 63
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=31.88 E-value=45 Score=28.24 Aligned_cols=53 Identities=13% Similarity=-0.033 Sum_probs=33.6
Q ss_pred HHHHhCCCcEEEcCCCCcCcC----------------------CChHHHHHHHHH-cCCCHHHHHHH-HHHHHHHcCC
Q psy15247 131 QKFAKDNANFSLNSDDPTLTG----------------------RYLNEDYQLAQS-WGFTREQFKII-NLNAAEASFQ 184 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~----------------------t~Ls~Ey~~~~~-~~l~~~~l~~l-~~nai~~sF~ 184 (203)
..++++|++++++||...... +.+...+ .+.. .+++.+++.++ ..|+.+.--+
T Consensus 299 ~~~~~~G~~~~~gtD~~~~~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~-~~~~~~~l~~~~~l~~~T~~~A~~lgl 375 (457)
T 1nfg_A 299 WNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVY-QGVNEGRISLTQFVELVATRPAKVFGM 375 (457)
T ss_dssp HHHHHTTCCSCEECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHHH-HHHHTTSSCHHHHHHHHTHHHHHHTTC
T ss_pred HHHHhCCCeEEEecCCCCCChHHhhhcccCCHhHCCCCcccHHHHHHHHH-HHHHcCCCCHHHHHHHHhhhHHHHhCC
Confidence 678999999999999643221 1123333 3445 57999886554 5677665433
No 64
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=31.46 E-value=1.8e+02 Score=22.36 Aligned_cols=52 Identities=6% Similarity=-0.020 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEeC
Q psy15247 59 TVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGIDL 113 (203)
Q Consensus 59 ~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~dL 113 (203)
+...++++++++.++.|..+ +++... .+++...+.++.......++|+.+..
T Consensus 35 ~~~~~~~gi~~~~~~~g~~~--~~~~~~-~~~~~~~~~~~~l~~~~vdgii~~~~ 86 (296)
T 3brq_A 35 YFSELLFHAARMAEEKGRQL--LLADGK-HSAEEERQAIQYLLDLRCDAIMIYPR 86 (296)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EEECCT-TSHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred hHHHHHHHHHHHHHHCCCEE--EEEeCC-CCHHHHHHHHHHHHhcCCCEEEEecC
Confidence 55667777777777778754 333322 23444455666666555566776654
No 65
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=30.84 E-value=2.1e+02 Score=25.09 Aligned_cols=85 Identities=16% Similarity=0.135 Sum_probs=58.2
Q ss_pred CCHHHHHHHHHHHHHHHHHCCceEE---EEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeec
Q psy15247 9 GDLDAVERFAYEFIEDCSKNNVAYV---EVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCA 85 (203)
Q Consensus 9 ~t~~~l~~~~~~~~~~~~~dgV~Y~---Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~ 85 (203)
-+++.+.+++|+++ .-|+-++ |.-.++.+ .++++-+..+.++++++++++|-...+.+-+.
T Consensus 174 Ls~~~~a~~~ye~~----~GGlDfiKDDE~~~~q~f------------~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT 237 (432)
T 3nwr_A 174 LSAAETAALVRELC----EAGVDFIKDDEVCANPAH------------APLAERVRAVMSEVRRYRERSGRPVMVAFNIT 237 (432)
T ss_dssp CCHHHHHHHHHHHH----HHTCSEEECCTTCSSCTT------------SCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC
T ss_pred CCHHHHHHHHHHHH----hcCCceeECCCCCCCCCc------------ccHHHHHHHHHHHHHHHHHHhCCcceEEeecC
Confidence 37888888877655 4577776 66666432 46788999999999999999985444444444
Q ss_pred CCCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 86 TKWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 86 R~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
-++++..+-.+.+++.-.+ ++=+|
T Consensus 238 --~~~~em~~Ra~~a~e~G~~-~~mvd 261 (432)
T 3nwr_A 238 --DDLDAMRRHAELVEREGGS-CVMAS 261 (432)
T ss_dssp --SCHHHHHHHHHHHHHTTCC-EEEEE
T ss_pred --CCHHHHHHHHHHHHHcCCC-EEEEe
Confidence 4566667777777776433 45555
No 66
>1brv_A Protein G, BRSV-G region; attachment protein G of bovine respiratory syncytial virus, immunoglobulin-binding protein; NMR {Bovine respiratory syncytial virus} SCOP: j.33.1.1
Probab=30.80 E-value=12 Score=20.60 Aligned_cols=12 Identities=8% Similarity=-0.086 Sum_probs=10.1
Q ss_pred CcEEEcCCCCcC
Q psy15247 138 ANFSLNSDDPTL 149 (203)
Q Consensus 138 v~vsinTDDp~~ 149 (203)
||+++|..||+-
T Consensus 14 VPCsiC~~N~~C 25 (32)
T 1brv_A 14 VPCSTCEGNLAC 25 (32)
T ss_pred ccccccCCChhH
Confidence 799999998864
No 67
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=30.56 E-value=1.5e+02 Score=21.39 Aligned_cols=91 Identities=19% Similarity=0.257 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHHHHHH--CCceE------EEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEE
Q psy15247 10 DLDAVERFAYEFIEDCSK--NNVAY------VEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSI 81 (203)
Q Consensus 10 t~~~l~~~~~~~~~~~~~--dgV~Y------~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI 81 (203)
+.++++....+.++++.+ --|.| +|+|.+ |.+ +++-..+.....+.+++|++.+-+-
T Consensus 12 dlea~ekalkemirqarkfagtvtytl~gn~l~i~it--------------gvp-eqvrkelakeaerl~~efni~v~y~ 76 (170)
T 4hhu_A 12 DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT--------------GVP-EQVRKELAKEAERLKAEFNINVQYQ 76 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEE--------------SCC-HHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe--------------CCc-HHHHHHHHHHHHHHHHhcceEEEEE
Confidence 678999999999999986 34555 355543 333 4455566666677778888766544
Q ss_pred Ee---------ecCCCCccc----HHHHHHHHHhhCCCceEEEeCCCCC
Q psy15247 82 LS---------CATKWPVDT----VPDTLRLAQNCTHYGVVGIDLLSIQ 117 (203)
Q Consensus 82 ~~---------~~R~~~~e~----a~~~~~~a~~~~~~~vvG~dL~G~E 117 (203)
+. ..|..+.+. ..++++.|.++ .+-|-+-|.|+.
T Consensus 77 imgsgsgvm~i~f~gddlea~ekalkemirqarkf--agtvtytl~gn~ 123 (170)
T 4hhu_A 77 IMGSGSGVMVIVFEGDDLEALEKALKEMIRQARKF--AGTVTYTLSGNR 123 (170)
T ss_dssp EECTTCCEEEEEEECSCHHHHHHHHHHHHHHHHHT--TCEEEEEECSSE
T ss_pred EEeCCceEEEEEEecCcHHHHHHHHHHHHHHHHhh--cceEEEEEeCCE
Confidence 32 234444433 34455666666 357888999986
No 68
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=30.53 E-value=2.6e+02 Score=24.02 Aligned_cols=84 Identities=11% Similarity=0.071 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHHHHHHHCCceEE---EEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecC
Q psy15247 10 DLDAVERFAYEFIEDCSKNNVAYV---EVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCAT 86 (203)
Q Consensus 10 t~~~l~~~~~~~~~~~~~dgV~Y~---Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R 86 (203)
+++.+.+++|+++ .-|+-++ |.-.++.+ .++++-+..+.++++++++++|-.. ++..+-
T Consensus 144 s~~~~a~~~ye~~----~GGlDfiKDDE~l~~qpf------------~p~~eR~~~~~eai~ra~~eTGe~k--~y~~Ni 205 (378)
T 3qfw_A 144 SPAALASIAHQLA----LGGVDLIKDDHGLADQAF------------SPFAERAAAVGKAVREANAARGGRT--LYAPNI 205 (378)
T ss_dssp CHHHHHHHHHHHH----HTTCSEEEECTTCSSCTT------------SCHHHHHHHHHHHHHHHHHHHTCCC--EEECBC
T ss_pred CHHHHHHHHHHHH----hcCCCcccCCcCcCCCCc------------ccHHHHHHHHHHHHHHHHHhhCCcc--EEEeec
Confidence 7888888777654 5787777 66666432 4678899999999999999998433 455555
Q ss_pred CCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 87 KWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 87 ~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
+-+.++..+-.+.+.+.- ..++=+|
T Consensus 206 Ta~~~em~~ra~~a~e~G-~~~~mvd 230 (378)
T 3qfw_A 206 SGTLDDMRRQLGVIRDEG-IGAVLVA 230 (378)
T ss_dssp CSSHHHHHHHHHHHHHHT-CCEEEEC
T ss_pred CCCHHHHHHHHHHHHHcC-CCEEEEe
Confidence 545666667777777763 2244444
No 69
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=30.45 E-value=1.9e+02 Score=22.40 Aligned_cols=52 Identities=10% Similarity=0.033 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHH---HHHHHHhhCCCceEEEe
Q psy15247 58 ETVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPD---TLRLAQNCTHYGVVGID 112 (203)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~---~~~~a~~~~~~~vvG~d 112 (203)
.+...++++++++.++.|..+ +++... .+++...+ .++.......++|+...
T Consensus 21 ~~~~~~~~gi~~~a~~~g~~~--~~~~~~-~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 75 (290)
T 2rgy_A 21 SYYGTILKQTDLELRAVHRHV--VVATGC-GESTPREQALEAVRFLIGRDCDGVVVIS 75 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCEE--EEECCC-SSSCHHHHHHHHHHHHHHTTCSEEEECC
T ss_pred chHHHHHHHHHHHHHHCCCEE--EEEeCC-CchhhhhhHHHHHHHHHhcCccEEEEec
Confidence 366778888888878888754 333333 23334444 66666655556666544
No 70
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=30.06 E-value=1.6e+02 Score=21.34 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=41.0
Q ss_pred cCCHHHHHHHHHHHHHHHHHCCceEEEEccC-ccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecC
Q psy15247 8 RGDLDAVERFAYEFIEDCSKNNVAYVEVRYM-PHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCAT 86 (203)
Q Consensus 8 ~~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~-P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R 86 (203)
.+|+.+-..++..+.+.+.+.|+..+|+.+. | |..-+.++ .++.. .|+.+..|-++.+
T Consensus 55 k~tp~AA~~aa~~~~~~~~~~Gi~~v~V~vkG~-------------G~Gre~ai----raL~~----~Gl~I~~I~DvTp 113 (129)
T 2vqe_K 55 KGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGT-------------GAGREQAI----RALQA----SGLQVKSIVDDTP 113 (129)
T ss_dssp GGSHHHHHHHHHHHHHHHHTTTCCEEEEEEESC-------------CTTHHHHH----HHHHT----SSSEEEECEECCC
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCeEEEEEEECC-------------CCCHHHHH----HHHHH----CCCEEEEEEEcCC
Confidence 3577888888999999999999999999985 2 23444344 44432 3777777776654
No 71
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis}
Probab=29.73 E-value=1.5e+02 Score=25.95 Aligned_cols=85 Identities=13% Similarity=0.069 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHHHHHHHCCceEE---EEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeec
Q psy15247 9 GDLDAVERFAYEFIEDCSKNNVAYV---EVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCA 85 (203)
Q Consensus 9 ~t~~~l~~~~~~~~~~~~~dgV~Y~---Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~ 85 (203)
-+++.+.+++|+++. -|+-++ |...++.+ .++++-+..+.++++++++++|-...+.+-+.
T Consensus 166 Ls~~~~a~~~ye~~~----GGlDfiKDDE~l~~qpf------------~p~~eRv~~v~eai~ra~~eTGe~k~y~~NiT 229 (425)
T 2zvi_A 166 RDLSDIKEQLRQQAL----GGVDLIKDDEIFFETGL------------APFETRIAEGKQILKETYEQTGHKTLYAVNLT 229 (425)
T ss_dssp CCHHHHHHHHHHHHH----TTCSEEECCTTCCCSSS------------SCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC
T ss_pred CCHHHHHHHHHHHHh----CCCCeeeCCCCCCCCCC------------ccHHHHHHHHHHHHHHHHHHhCCcceeeCcCC
Confidence 378888888777654 565443 34444322 36788899999999999999986444444444
Q ss_pred CCCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 86 TKWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 86 R~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
-+.++..+-.+.+.+.-. .++=+|
T Consensus 230 --~~~~em~~Ra~~a~e~G~-~~~mvd 253 (425)
T 2zvi_A 230 --GRTADLKDKARRAAELGA-DALLFN 253 (425)
T ss_dssp --SCGGGHHHHHHHHHHTTC-SEEEEC
T ss_pred --CCHHHHHHHHHHHHHhCC-CeEEEe
Confidence 447778888888877632 344444
No 72
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=29.62 E-value=1.5e+02 Score=21.02 Aligned_cols=58 Identities=16% Similarity=0.158 Sum_probs=41.1
Q ss_pred cCCHHHHHHHHHHHHHHHHHCCceEEEEccC-ccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecC
Q psy15247 8 RGDLDAVERFAYEFIEDCSKNNVAYVEVRYM-PHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCAT 86 (203)
Q Consensus 8 ~~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~-P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R 86 (203)
.+|+.+-...+..+.+.+.+.|+..+|+++. | |..-+.++.++ . ..|+.+..|-++.+
T Consensus 45 k~tp~AA~~aa~~~~~~~~~~Gi~~v~v~vkG~-------------G~Gr~~airaL----~----~~Gl~I~~I~DvTp 103 (117)
T 3r8n_K 45 KSTPFAAQVAAERCADAVKEYGIKNLEVMVKGP-------------GPGRESTIRAL----N----AAGFRITNITDVTP 103 (117)
T ss_dssp GSSHHHHHHHHHHHHHHHTTSCCCEEEEEEECS-------------SSSTTHHHHHH----H----HTTCEEEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCcEEEEEEeCC-------------CccHHHHHHHH----H----hCCCEEEEEEEeCC
Confidence 3577788888899999999999999999995 2 22334444444 2 23788777776654
No 73
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=29.36 E-value=2e+02 Score=22.30 Aligned_cols=52 Identities=12% Similarity=0.045 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 58 ETVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
.+...++++++++.++.|..+- ++... .+++...+.++.......++|+-+.
T Consensus 29 ~~~~~~~~gi~~~a~~~g~~~~--~~~~~-~~~~~~~~~~~~l~~~~vdgiIi~~ 80 (289)
T 2fep_A 29 IFYSELARGIEDIATMYKYNII--LSNSD-QNMEKELHLLNTMLGKQVDGIVFMG 80 (289)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEE--EEECT-TCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred chHHHHHHHHHHHHHHcCCEEE--EEeCC-CCHHHHHHHHHHHHhCCCCEEEEec
Confidence 4677788888888888887653 33322 2333444566666655556665443
No 74
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=29.33 E-value=1.9e+02 Score=22.14 Aligned_cols=85 Identities=8% Similarity=-0.076 Sum_probs=49.2
Q ss_pred HHHHHHHHHHCCceEEEEccCccchhh-hhhhhc-cCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHH
Q psy15247 18 AYEFIEDCSKNNVAYVEVRYMPHKLLG-TELYQM-LGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPD 95 (203)
Q Consensus 18 ~~~~~~~~~~dgV~Y~Elr~~P~~~~~-~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~ 95 (203)
..+.++.+++-|..++|++..+..... .+ .. ...++.+ . .+.+++.-+++|+.+-.+.+.. ....+...+
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~--~~~~~~~~~~-~----~~~~~~~l~~~gl~i~~~~~~~-~~~~~~~~~ 95 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWGD--KVFDFNLDAQ-T----QKEIKELAASKGIKIVGTGVYV-AEKSSDWEK 95 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGTT--CEESTTCCHH-H----HHHHHHHHHHTTCEEEEEEEEC-CSSTTHHHH
T ss_pred HHHHHHHHHHcCCCEEeecCCccccccccc--ccccccCCHH-H----HHHHHHHHHHcCCeEEEEeccC-CccHHHHHH
Confidence 467888999999999999976421000 00 00 0023432 2 3334445567788766554432 345567788
Q ss_pred HHHHHHhhCCCceEE
Q psy15247 96 TLRLAQNCTHYGVVG 110 (203)
Q Consensus 96 ~~~~a~~~~~~~vvG 110 (203)
.++.|...-.+.|+.
T Consensus 96 ~i~~A~~lGa~~v~~ 110 (262)
T 3p6l_A 96 MFKFAKAMDLEFITC 110 (262)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEe
Confidence 888888775444443
No 75
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=28.86 E-value=2e+02 Score=22.29 Aligned_cols=80 Identities=14% Similarity=0.085 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHhHhhcCceEEEEEeecCCC-CcccHHHHHHHHHhhCCCceEEEeCCCCCCCccccccccccc--HHH
Q psy15247 57 KETVRRVYQGLKRGEDEFQVKSKSILSCATKW-PVDTVPDTLRLAQNCTHYGVVGIDLLSIQPETGPHGSVYSYN--QKF 133 (203)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~-~~e~a~~~~~~a~~~~~~~vvG~dL~G~EpE~~gHG~l~~~p--~~l 133 (203)
..+...+.++++++.++.|+.+- ++..... +++...+.++.++....++|+-.....+. . -+ +.+
T Consensus 15 ~~~~~~~~~gi~~~a~~~g~~~~--~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~---~-------~~~~~~~ 82 (297)
T 3rot_A 15 DPYWTSLFQGAKKAAEELKVDLQ--ILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTA---F-------SKSLQRA 82 (297)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEE--EECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSST---T-------HHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCcEEE--EECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHH---H-------HHHHHHH
Confidence 34777888888888888886544 4433332 45555566776666555655543332221 0 12 678
Q ss_pred HhCCCcEE-EcCCCCc
Q psy15247 134 AKDNANFS-LNSDDPT 148 (203)
Q Consensus 134 ~~~Gv~vs-inTDDp~ 148 (203)
.+.|+||. ++++.+.
T Consensus 83 ~~~giPvV~~~~~~~~ 98 (297)
T 3rot_A 83 NKLNIPVIAVDTRPKD 98 (297)
T ss_dssp HHHTCCEEEESCCCSC
T ss_pred HHCCCCEEEEcCCCcc
Confidence 88999965 4555443
No 76
>3j20_M 30S ribosomal protein S11P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=28.06 E-value=1.8e+02 Score=21.33 Aligned_cols=65 Identities=14% Similarity=0.067 Sum_probs=43.3
Q ss_pred CCHHHHHHHHHHHHHHHHHCCceEEEEccC-ccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecC
Q psy15247 9 GDLDAVERFAYEFIEDCSKNNVAYVEVRYM-PHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCAT 86 (203)
Q Consensus 9 ~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~-P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R 86 (203)
+|+-+-..++..+.+.+.+.|+..+|+++. |...-.. ..|...+.++.++.. .|+.+..|-++.+
T Consensus 55 sTp~AA~~aa~~~~~~a~e~Gi~~v~V~vkG~gg~~~~-----~pG~GresairaL~~--------~Gl~I~~I~DvTp 120 (137)
T 3j20_M 55 PSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSK-----TPGPGAQAAIRALAR--------AGLKIGRVEDVTP 120 (137)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTEEEEEEEEECCCSSSCC-----SCCTHHHHHHHHHHH--------HTCEEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCCCCc-----CCCCcHHHHHHHHHh--------CCCEEEEEEEcCC
Confidence 467777788899999999999999999986 4211110 013445555555532 2788888877664
No 77
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=27.81 E-value=2.5e+02 Score=24.40 Aligned_cols=88 Identities=7% Similarity=-0.091 Sum_probs=50.3
Q ss_pred HHHHHCCceEEEEccCcc-chhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEe-ecCCCCcccHHHHHHHH
Q psy15247 23 EDCSKNNVAYVEVRYMPH-KLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILS-CATKWPVDTVPDTLRLA 100 (203)
Q Consensus 23 ~~~~~dgV~Y~Elr~~P~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~-~~R~~~~e~a~~~~~~a 100 (203)
+.+.+-|+..+-+.++-. .+... .-+.+.+++++.+.+.++.+++ .|+.+++-.. ..|. +++.+.++++.+
T Consensus 117 ~~A~~aG~~~V~i~~s~Sd~~~~~-----~l~~s~~e~l~~~~~~v~~ak~-~G~~V~~~~eda~r~-d~~~~~~v~~~~ 189 (423)
T 3ivs_A 117 RVAVETGVDGVDVVIGTSQYLRKY-----SHGKDMTYIIDSATEVINFVKS-KGIEVRFSSEDSFRS-DLVDLLSLYKAV 189 (423)
T ss_dssp HHHHHTTCSEEEEEEEC------------------CHHHHHHHHHHHHHHT-TTCEEEEEEESGGGS-CHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEeeccHHHHHH-----HcCCCHHHHHHHHHHHHHHHHH-CCCEEEEEEccCcCC-CHHHHHHHHHHH
Confidence 445556888777765421 22111 1246888899999998887765 5777766433 3443 556677777777
Q ss_pred HhhCCCceEEEeCCCCC
Q psy15247 101 QNCTHYGVVGIDLLSIQ 117 (203)
Q Consensus 101 ~~~~~~~vvG~dL~G~E 117 (203)
.+.-.+.|.=-|-.|-=
T Consensus 190 ~~~Ga~~i~l~DTvG~~ 206 (423)
T 3ivs_A 190 DKIGVNRVGIADTVGCA 206 (423)
T ss_dssp HHHCCSEEEEEETTSCC
T ss_pred HHhCCCccccCCccCcC
Confidence 77654545555777654
No 78
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=27.55 E-value=2.5e+02 Score=22.79 Aligned_cols=76 Identities=5% Similarity=-0.059 Sum_probs=46.9
Q ss_pred HHHHHHHHCCceEEEEccC---ccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHH
Q psy15247 20 EFIEDCSKNNVAYVEVRYM---PHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDT 96 (203)
Q Consensus 20 ~~~~~~~~dgV~Y~Elr~~---P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~ 96 (203)
+.++.+.+.|+.++-+-+. |..+..- ..++.+++.+++++.... + .|+.+++-..+.+..+.++..++
T Consensus 110 ~~~~~L~~~g~~~v~iSld~~~~~~~~~i----~~~~~~~~~v~~~i~~l~----~-~g~~v~i~~vv~~g~n~~ei~~~ 180 (340)
T 1tv8_A 110 KHGQKLYDAGLRRINVSLDAIDDTLFQSI----NNRNIKATTILEQIDYAT----S-IGLNVKVNVVIQKGINDDQIIPM 180 (340)
T ss_dssp HHHHHHHHHTCCEEEEECCCSSHHHHHHH----HSSCCCHHHHHHHHHHHH----H-TTCEEEEEEEECTTTTGGGHHHH
T ss_pred HHHHHHHHCCCCEEEEecCCCCHHHHHHh----hCCCCCHHHHHHHHHHHH----H-CCCCEEEEEEEeCCCCHHHHHHH
Confidence 3566677778877777664 2222111 011226776666554443 2 46677776677887777888999
Q ss_pred HHHHHhhC
Q psy15247 97 LRLAQNCT 104 (203)
Q Consensus 97 ~~~a~~~~ 104 (203)
++.+.+..
T Consensus 181 ~~~~~~~g 188 (340)
T 1tv8_A 181 LEYFKDKH 188 (340)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 99888764
No 79
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=27.39 E-value=66 Score=26.74 Aligned_cols=53 Identities=11% Similarity=0.058 Sum_probs=31.5
Q ss_pred HHHhCCCcEEEcCCC-CcC---------------cC--CChHHHHHHHHH-cCCCHHHH-HHHHHHHHHHcCC
Q psy15247 132 KFAKDNANFSLNSDD-PTL---------------TG--RYLNEDYQLAQS-WGFTREQF-KIINLNAAEASFQ 184 (203)
Q Consensus 132 ~l~~~Gv~vsinTDD-p~~---------------f~--t~Ls~Ey~~~~~-~~l~~~~l-~~l~~nai~~sF~ 184 (203)
..+++|+++++.||. |.. .+ +.+..-+..+.. ..+|.+++ +.+..|+.+.-.+
T Consensus 293 ~~l~~G~~~~lgsD~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~T~n~A~~lgl 365 (426)
T 2z00_A 293 EGLLDGTLDAIATDHAPHTLAEKEKDLLRAPFGIPSLEVAFPLLYTELHLKRGFPLQRLVELFTDGPRRVLGL 365 (426)
T ss_dssp HHHHHTSSCEECCCBCCCCTTGGGSCTTTSCCCBCCTTTHHHHHHHHTHHHHCCCHHHHHHHHTHHHHHHHTC
T ss_pred HHHhCCCcEEEecCCCCCCHHHccCChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHHhCC
Confidence 445599999999996 531 11 122333333344 67998885 4455677666554
No 80
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=27.01 E-value=2.1e+02 Score=21.91 Aligned_cols=77 Identities=6% Similarity=-0.039 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEeCCCCCCCcccccccccc-c--HHHH
Q psy15247 58 ETVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQPETGPHGSVYSY-N--QKFA 134 (203)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~EpE~~gHG~l~~~-p--~~l~ 134 (203)
.+...+.++++++.++.|+.+-+. ... .+++...+.++.++....++|+-+....+. . + +.+.
T Consensus 21 ~~~~~~~~gi~~~a~~~g~~~~~~--~~~-~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~-----------~~~~~~~~~ 86 (293)
T 3l6u_A 21 EFAQRLINAFKAEAKANKYEALVA--TSQ-NSRISEREQILEFVHLKVDAIFITTLDDVY-----------IGSAIEEAK 86 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEE--ECS-SCHHHHHHHHHHHHHTTCSEEEEECSCTTT-----------THHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEE--CCC-CCHHHHHHHHHHHHHcCCCEEEEecCChHH-----------HHHHHHHHH
Confidence 467778888888888888765443 322 234444566666666666777765544332 1 3 6788
Q ss_pred hCCCcEE-EcCCCCc
Q psy15247 135 KDNANFS-LNSDDPT 148 (203)
Q Consensus 135 ~~Gv~vs-inTDDp~ 148 (203)
+.|+||. ++++.+.
T Consensus 87 ~~~iPvV~~~~~~~~ 101 (293)
T 3l6u_A 87 KAGIPVFAIDRMIRS 101 (293)
T ss_dssp HTTCCEEEESSCCCC
T ss_pred HcCCCEEEecCCCCC
Confidence 8999965 4555443
No 81
>1ugj_A Riken cDNA 2310057J16 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.41.1.3
Probab=26.37 E-value=83 Score=23.32 Aligned_cols=27 Identities=26% Similarity=0.310 Sum_probs=22.8
Q ss_pred HHHHHHHHHHcCCC----HHHHHHHHHHHHh
Q psy15247 172 KIINLNAAEASFQP----EHEKKELIKLLES 198 (203)
Q Consensus 172 ~~l~~nai~~sF~~----~~~k~~l~~~~~~ 198 (203)
+.+..||++++.++ +++|+.++++++.
T Consensus 20 r~iI~NAL~~~~LaG~vN~~~r~~~le~i~~ 50 (141)
T 1ugj_A 20 KFIIHNALSHCCLAGKVNEPQKNRILEEIEK 50 (141)
T ss_dssp HHHHHHHHHHTTTCSSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCccCHHHHHHHHHHHhc
Confidence 56889999998865 5799999999886
No 82
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=26.07 E-value=54 Score=27.15 Aligned_cols=51 Identities=16% Similarity=0.081 Sum_probs=32.0
Q ss_pred HHHHhCCCc---EEEcCCCCcC---cC-------------CChHHHHHHHHH-cCCCHHHHHHH-HHHHHHH
Q psy15247 131 QKFAKDNAN---FSLNSDDPTL---TG-------------RYLNEDYQLAQS-WGFTREQFKII-NLNAAEA 181 (203)
Q Consensus 131 ~~l~~~Gv~---vsinTDDp~~---f~-------------t~Ls~Ey~~~~~-~~l~~~~l~~l-~~nai~~ 181 (203)
+.++++|++ |+|+||..+. +. .++-.....+.. .+++.+++.++ ..|+.+.
T Consensus 268 ~~~~~~g~~~d~i~l~TD~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~npA~~ 339 (390)
T 1onw_A 268 ARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGF 339 (390)
T ss_dssp HHHHHTTCCGGGEEEECCBTCC-------------CCCCSHHHHHHHHHHHHHHCCCHHHHHGGGTHHHHHH
T ss_pred HHHHHcCCCccceEEEccCCCCCcccCCccccccccCCCHHHHHHHHHHHHHHcCCCHHHHHHHHhHHHHHH
Confidence 788999986 8999998521 11 133344444555 68888886555 4455544
No 83
>1yqh_A DUF77, IG hypothetical 16092; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Bacillus cereus atcc 14579} SCOP: d.58.48.1
Probab=25.85 E-value=1.7e+02 Score=20.41 Aligned_cols=63 Identities=13% Similarity=-0.006 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeec
Q psy15247 12 DAVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCA 85 (203)
Q Consensus 12 ~~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~ 85 (203)
+.+.....++++-+.+.|+.| +.+|...+-.| +.+++++++-+..+..-+....++-..+-++
T Consensus 21 ~svs~~Va~~i~vl~~sGl~y---~~~pmgT~IEG--------e~devm~vv~~~~e~~~~~G~~RV~t~iKId 83 (109)
T 1yqh_A 21 KDVYSVVDKAIEVVQQSGVRY---EVGAMETTLEG--------ELDVLLDVVKRAQQACVDAGAEEVITSIKIH 83 (109)
T ss_dssp SCHHHHHHHHHHHHHHSCSEE---EECSSCEEEEE--------CHHHHHHHHHHHHHHHHHTTCSEEEEEEEEE
T ss_pred CcHHHHHHHHHHHHHHcCCCe---EecCCccEEEc--------CHHHHHHHHHHHHHHHHHcCCCeEEEEEEEE
Confidence 457778888888888999999 67887655552 6899999888877665444334555555553
No 84
>1ykw_A Rubisco-like protein; beta-alpha-barrel, unknown function; 2.00A {Chlorobaculum tepidum} SCOP: c.1.14.1 d.58.9.1 PDB: 1tel_A
Probab=25.74 E-value=1.8e+02 Score=25.47 Aligned_cols=85 Identities=12% Similarity=0.042 Sum_probs=56.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCceEE---EEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeec
Q psy15247 9 GDLDAVERFAYEFIEDCSKNNVAYV---EVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCA 85 (203)
Q Consensus 9 ~t~~~l~~~~~~~~~~~~~dgV~Y~---Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~ 85 (203)
-+++.+.+++|+++. -|+-++ |...++.+ ..+++-+..+.++++++++++|-.....+-+.
T Consensus 177 Ls~~~~a~~~ye~~~----GGlDfiKDDE~~~~qpf------------~p~~eR~~~v~eai~~a~~eTGe~k~~~~NiT 240 (435)
T 1ykw_A 177 LSPGEFAEIAYQSWL----GGLDIAKDDEMLADVTW------------SSIEERAAHLGKARRKAEAETGEPKIYLANIT 240 (435)
T ss_dssp CCHHHHHHHHHHHHH----TTCSEEECCTTCSSBTT------------BCHHHHHHHHHHHHHHHHHHHSSCCEEEEECC
T ss_pred CCHHHHHHHHHHHHh----cCCCcccCccccCCCCC------------CcHHHHHHHHHHHHHHHHHhhCCcceeecccC
Confidence 378888888877654 565443 33344222 36788889999999999999986554444444
Q ss_pred CCCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 86 TKWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 86 R~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
-++++..+-.+.+.+.-.+ ++=+|
T Consensus 241 --~~~~em~~Ra~~a~e~G~~-~~mvd 264 (435)
T 1ykw_A 241 --DEVDSLMEKHDVAVRNGAN-ALLIN 264 (435)
T ss_dssp --CCGGGHHHHHHHHHHHTCC-EEEEE
T ss_pred --CCHHHHHHHHHHHHHcCCC-EEEEe
Confidence 3677888888888877432 44443
No 85
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=25.66 E-value=32 Score=32.34 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=17.0
Q ss_pred HHHHC--CceEEEEccCccchhh
Q psy15247 24 DCSKN--NVAYVEVRYMPHKLLG 44 (203)
Q Consensus 24 ~~~~d--gV~Y~Elr~~P~~~~~ 44 (203)
++.+| ||+|.|.||-|.++..
T Consensus 344 R~isdi~gVkytEgRflPYfFPD 366 (759)
T 2zuv_A 344 RMIADIPGVKYTEGRFLPYFFPD 366 (759)
T ss_dssp HHHHTCCSSSEEEEEESSCBSTT
T ss_pred EEecCCCCcceeecccccccCCc
Confidence 34555 9999999999998754
No 86
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=25.64 E-value=1.4e+02 Score=23.15 Aligned_cols=54 Identities=9% Similarity=0.093 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhHhhc-CceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 59 TVRRVYQGLKRGEDEF-QVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 59 ~~~~v~~~~~~~~~~~-~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
+...++++++++.++. |..+.+..+..-..+++...+.++.+.....++|+-+.
T Consensus 23 ~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~ 77 (304)
T 3gbv_A 23 YWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAP 77 (304)
T ss_dssp HHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 5667788888877776 66666665544444454445566666655455555443
No 87
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=25.64 E-value=1.5e+02 Score=23.31 Aligned_cols=52 Identities=17% Similarity=0.018 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhHhhcCc----eEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 60 VRRVYQGLKRGEDEFQV----KSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 60 ~~~v~~~~~~~~~~~~i----~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
...+++|+++.-++.|. .+.++++-... +++...+.++.....+.++|+..+
T Consensus 22 ~~~~~~gi~~~l~~~Gy~~g~~v~l~~~~~~~-~~~~~~~~~~~l~~~~vDgII~~~ 77 (302)
T 2qh8_A 22 LDATRQGLLDGLKAKGYEEGKNLEFDYKTAQG-NPAIAVQIARQFVGENPDVLVGIA 77 (302)
T ss_dssp HHHHHHHHHHHHHHTTCCBTTTEEEEEEECTT-CHHHHHHHHHHHHHTCCSEEEEES
T ss_pred HHHHHHHHHHHHHHcCCCCCCceEEEEecCCC-CHHHHHHHHHHHHhCCCCEEEECC
Confidence 34555566665566665 67777665443 344455566666666666776654
No 88
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=25.60 E-value=1.4e+02 Score=23.51 Aligned_cols=53 Identities=19% Similarity=0.174 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhHhhcCc---eEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 59 TVRRVYQGLKRGEDEFQV---KSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 59 ~~~~v~~~~~~~~~~~~i---~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
+...+++|+++..++.|. .+.++++-... +++...+.++.....+.++|+..+
T Consensus 15 ~~~~i~~gi~~~l~~~gy~g~~v~l~~~~~~~-~~~~~~~~~~~l~~~~vDgII~~~ 70 (295)
T 3lft_A 15 SLDLIYKGIQDGLAEEGYKDDQVKIDFMNSEG-DQSKVATMSKQLVANGNDLVVGIA 70 (295)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEEECTT-CHHHHHHHHHHHTTSSCSEEEEES
T ss_pred hHHHHHHHHHHHHHHcCCCCCceEEEEecCCC-CHHHHHHHHHHHHhcCCCEEEECC
Confidence 445566666666666677 77776665443 333445555555555566666654
No 89
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=25.14 E-value=34 Score=27.98 Aligned_cols=31 Identities=13% Similarity=0.104 Sum_probs=21.1
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS 163 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~ 163 (203)
+.+.+.|++++||||-=... .+...|..+.+
T Consensus 244 ~~~~~~g~~i~igSDAH~~~--~vg~~~~~~~~ 274 (283)
T 3dcp_A 244 TLASELQIPFVYGSDSHGVQ--DIGRGYSTYCQ 274 (283)
T ss_dssp HHHHHTTCCEEEECCBSSGG--GTTTTHHHHHH
T ss_pred HHHHHcCCCEEEEcCCCCHH--HHhChHHHHHH
Confidence 88899999999999954333 33334544443
No 90
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=25.13 E-value=1.4e+02 Score=23.17 Aligned_cols=42 Identities=19% Similarity=0.155 Sum_probs=29.1
Q ss_pred cEEEcCCCCcCcCC--------------ChHHHHHHHHH-cCCCHHHHHHHH-HHHHH
Q psy15247 139 NFSLNSDDPTLTGR--------------YLNEDYQLAQS-WGFTREQFKIIN-LNAAE 180 (203)
Q Consensus 139 ~vsinTDDp~~f~t--------------~Ls~Ey~~~~~-~~l~~~~l~~l~-~nai~ 180 (203)
++.+.||-|-+.-. .+.+-+..+++ .|++.+++.++. .|+.+
T Consensus 201 rll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~~a~~~g~~~e~~~~~~~~Na~r 258 (264)
T 1xwy_A 201 KLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKT 258 (264)
T ss_dssp GEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HEEEecCCCCcCccccccccCCCCCchHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 58899999864321 24455566667 899999987765 57655
No 91
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=25.11 E-value=2.8e+02 Score=22.62 Aligned_cols=84 Identities=6% Similarity=-0.035 Sum_probs=45.6
Q ss_pred HHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcC--ceEEEEEeecCCCCcccHHHH
Q psy15247 19 YEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQ--VKSKSILSCATKWPVDTVPDT 96 (203)
Q Consensus 19 ~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--i~~rlI~~~~R~~~~e~a~~~ 96 (203)
.+.++.+.+-|+..+-+.. ......-.....++.+.+++++++..+. +.| +.+.+|+.+ ..+.++..+.
T Consensus 152 ~e~l~~L~~aG~~~i~i~l--Et~~~~~~~~i~~~~~~~~~l~~i~~a~-----~~Gi~v~~~~i~Gl--get~e~~~~~ 222 (350)
T 3t7v_A 152 NATLLKAREKGANFLALYQ--ETYDTELYRKLRVGQSFDGRVNARRFAK-----QQGYCVEDGILTGV--GNDIESTILS 222 (350)
T ss_dssp HHHHHHHHHTTEEEEECCC--BCSCHHHHHHHSTTCCHHHHHHHHHHHH-----HHTCEEEEEEEESS--SCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEee--ecCCHHHHHHhCCCCCHHHHHHHHHHHH-----HcCCeEccceEeec--CCCHHHHHHH
Confidence 3455666666766555432 1111110011123567887777654432 235 555666665 6677788888
Q ss_pred HHHHHhhCCCceEEEe
Q psy15247 97 LRLAQNCTHYGVVGID 112 (203)
Q Consensus 97 ~~~a~~~~~~~vvG~d 112 (203)
++.+.+..++ .++|.
T Consensus 223 l~~l~~l~~~-~v~~~ 237 (350)
T 3t7v_A 223 LRGMSTNDPD-MVRVM 237 (350)
T ss_dssp HHHHHHTCCS-EEEEE
T ss_pred HHHHHhCCCC-EEEec
Confidence 8888777544 45554
No 92
>2kwp_A Transcription elongation protein NUSA; NMR {Escherichia coli}
Probab=25.08 E-value=80 Score=22.81 Aligned_cols=37 Identities=5% Similarity=-0.005 Sum_probs=27.2
Q ss_pred CCCCHHHHHHHHHHHHHHhHh-hcCceEEEEEeecCCC
Q psy15247 52 GYEGLKETVRRVYQGLKRGED-EFQVKSKSILSCATKW 88 (203)
Q Consensus 52 ~~~~~~~~~~~v~~~~~~~~~-~~~i~~rlI~~~~R~~ 88 (203)
+|++.+.+++++-+++..+-+ .||-...+-+.++|..
T Consensus 16 KgI~~e~v~eaie~AL~~A~kk~~g~~~~~~V~id~~t 53 (129)
T 2kwp_A 16 KALPREKIFEALESALATATKKKYEQEIDVRVQIDRKS 53 (129)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEETTT
T ss_pred hCcCHHHHHHHHHHHHHHHHHHhcCCccceEEEEECCC
Confidence 489999999999999888644 5775555556666643
No 93
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=24.93 E-value=2.4e+02 Score=22.34 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=37.3
Q ss_pred cHHHHHH-HHHhhCCCceEEEeCCCCC----CCccc-----------------------cc-cccc--cc-----HHHHh
Q psy15247 92 TVPDTLR-LAQNCTHYGVVGIDLLSIQ----PETGP-----------------------HG-SVYS--YN-----QKFAK 135 (203)
Q Consensus 92 ~a~~~~~-~a~~~~~~~vvG~dL~G~E----pE~~g-----------------------HG-~l~~--~p-----~~l~~ 135 (203)
.+.+.+. +..+++|+.|+-+|++|.- +|..+ -| ..+. .| +.+.+
T Consensus 70 ~~~~~l~~~i~~~~Pd~VihvG~aggr~~i~lEr~A~N~~d~~~pDn~G~~P~~~~i~~~Gp~a~~stLpvk~~v~~l~~ 149 (228)
T 4hps_A 70 TSLEHLYAAVDKYQPELVISVGQAGGRTNITVERVAININDARIPDNAGNQPIDTPVIVDGPAAYFSRLPIKTMVNALNT 149 (228)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEEECTTCSSEEEECEEESCEECSSCCTTSCCCEEECSSTTCCSEEECCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEeccCCCCceEEEEEEEeccCCCCCCCcCCCCCCCCcCcCCCCceeeeCCCHHHHHHHHHH
Confidence 4555554 4445678999999999765 24322 11 1111 45 78888
Q ss_pred CCCcEEEcCCCCcCcC
Q psy15247 136 DNANFSLNSDDPTLTG 151 (203)
Q Consensus 136 ~Gv~vsinTDDp~~f~ 151 (203)
.|+|++++.|--++..
T Consensus 150 ~Gipa~vS~dAGtYvC 165 (228)
T 4hps_A 150 AGIPASVSQTAGTFVC 165 (228)
T ss_dssp TTCCEEEESCCCSSHH
T ss_pred cCCcEEEeCCCCcchh
Confidence 9999999765444433
No 94
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=24.75 E-value=23 Score=29.46 Aligned_cols=34 Identities=15% Similarity=0.018 Sum_probs=25.3
Q ss_pred CChHHHHHHHHH-cCCCHHHHHHH-HHHHHHHcCCC
Q psy15247 152 RYLNEDYQLAQS-WGFTREQFKII-NLNAAEASFQP 185 (203)
Q Consensus 152 t~Ls~Ey~~~~~-~~l~~~~l~~l-~~nai~~sF~~ 185 (203)
.++-.++..+.. .+++..+..++ ..|+.++--++
T Consensus 311 ~~~~~~~~~~~~~~g~~~~~al~~aT~~~A~~lg~~ 346 (382)
T 1yrr_A 311 LTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVE 346 (382)
T ss_dssp CCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCT
T ss_pred cCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhCCC
Confidence 378888888886 89999986555 56777766554
No 95
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=24.72 E-value=49 Score=26.03 Aligned_cols=55 Identities=7% Similarity=0.118 Sum_probs=39.8
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHHcCCCHHH-HHHHHHHHHHHcCCCH
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQSWGFTREQ-FKIINLNAAEASFQPE 186 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~~~l~~~~-l~~l~~nai~~sF~~~ 186 (203)
..+...|+++.++||-+.........++..+. .++|..+ ++.++.|+.+.-.+++
T Consensus 312 ~~~~~~g~~~~~g~d~~~~~~~~~~~~~~~~~-~gls~~eal~~~T~~pA~~lgl~~ 367 (426)
T 3mkv_A 312 EIMKRAGVKMGFGTDLLGEAQRLQSDEFRILA-EVLSPAEVIASATIVSAEVLGMQD 367 (426)
T ss_dssp HHHHHHTCCBCCCCCCCGGGGGGTTHHHHHHH-TTSCHHHHHHHTTHHHHHHTTCBT
T ss_pred HHhhhcCceeeeccCCcccccchHHHHHHHHH-hCCCHHHHHHHHHHHHHHHhCCCC
Confidence 78899999999999988776665555555444 6888887 4445577777665543
No 96
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=24.65 E-value=2.2e+02 Score=22.65 Aligned_cols=53 Identities=9% Similarity=-0.065 Sum_probs=32.3
Q ss_pred HHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEe
Q psy15247 20 EFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILS 83 (203)
Q Consensus 20 ~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~ 83 (203)
..++.+++-|..++|++...... ..+ ......-.+.+++.-+++|+.+-.+.+
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~----------~~~-~~~~~~~~~~~~~~l~~~Gl~i~~~~~ 91 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDP----------WWP-DIERDRRAIAYAKAFRKAGLTIESTFG 91 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCT----------TSC-HHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHcCCCEEEeeccccCc----------ccc-ccchhhHHHHHHHHHHHcCCeEEEeec
Confidence 34566778999999998752110 012 222333456666667788988765543
No 97
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=24.23 E-value=3.3e+02 Score=23.12 Aligned_cols=91 Identities=8% Similarity=0.032 Sum_probs=59.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCceEEEEccCccchhhhhhh---hc--cCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEe
Q psy15247 9 GDLDAVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTELY---QM--LGYEGLKETVRRVYQGLKRGEDEFQVKSKSILS 83 (203)
Q Consensus 9 ~t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~---~~--~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~ 83 (203)
.+++++. +.++++.++|.+.+-+............. .. ....+..+.++..++.++..++..|-.+.+.+.
T Consensus 152 ~~~~~~~----~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~~~l~vD 227 (421)
T 4hnl_A 152 DNLDDLY----HEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQFQMLHD 227 (421)
T ss_dssp SSHHHHH----HHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CCHHHHH----HHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCCceEecc
Confidence 3566554 34556667899998887652111000000 00 012345667777777888888888999999999
Q ss_pred ecCCCCcccHHHHHHHHHhh
Q psy15247 84 CATKWPVDTVPDTLRLAQNC 103 (203)
Q Consensus 84 ~~R~~~~e~a~~~~~~a~~~ 103 (203)
....+++++|.+.++...++
T Consensus 228 an~~~~~~~A~~~~~~l~~~ 247 (421)
T 4hnl_A 228 VHERLHPNQAIQFAKAAEPY 247 (421)
T ss_dssp CTTCSCHHHHHHHHHHHGGG
T ss_pred ccccCCHHHHHHHHHHhhhh
Confidence 99999998888888877665
No 98
>4dhx_B Enhancer of yellow 2 transcription factor homolog, 80 kDa MCM3-associated protein; mRNA export, transport protein-DNA binding protein complex; 2.10A {Homo sapiens}
Probab=23.93 E-value=1.8e+02 Score=20.05 Aligned_cols=18 Identities=28% Similarity=0.475 Sum_probs=15.6
Q ss_pred CCCHHHHHHHHHHHHhhh
Q psy15247 183 FQPEHEKKELIKLLESEY 200 (203)
Q Consensus 183 F~~~~~k~~l~~~~~~~~ 200 (203)
-.|++.|++|+.++.++.
T Consensus 78 ~VP~~VK~Ell~rIr~fL 95 (101)
T 4dhx_B 78 LVPDSVKKELLQRIRTFL 95 (101)
T ss_dssp HSCHHHHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHH
Confidence 389999999999998764
No 99
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=23.83 E-value=67 Score=27.72 Aligned_cols=55 Identities=16% Similarity=0.050 Sum_probs=35.1
Q ss_pred HHHHhCCCcEEEcCCCCcCc-------------------C--CChHHHHHHHHH-cCCCHHHHHHHH-HHHHHHcCCC
Q psy15247 131 QKFAKDNANFSLNSDDPTLT-------------------G--RYLNEDYQLAQS-WGFTREQFKIIN-LNAAEASFQP 185 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f-------------------~--t~Ls~Ey~~~~~-~~l~~~~l~~l~-~nai~~sF~~ 185 (203)
..+++.|++++++||.+... + +.+...+..+.+ .+++.+++.+++ .|+.+.--++
T Consensus 329 ~~~l~~G~~~~~gtD~~~~~~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~l~~~T~~~A~~lgl~ 406 (501)
T 2vm8_A 329 NSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLY 406 (501)
T ss_dssp HHHHHHTSSCCCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHHTCT
T ss_pred HHHHhcCceEEEEecCCCCChhhhhcccCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHhCCC
Confidence 35899999999999976431 1 112233333444 578998876664 7777765553
No 100
>2epi_A UPF0045 protein MJ1052; NPPSFA, national project on protein structural and functiona analyses; 1.70A {Methanocaldococcus jannaschii} PDB: 2eky_A
Probab=23.40 E-value=1.7e+02 Score=19.99 Aligned_cols=60 Identities=13% Similarity=0.044 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEee
Q psy15247 13 AVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSC 84 (203)
Q Consensus 13 ~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~ 84 (203)
.+.....++++-+.+.|+.| +.+|...+-.| +.+++++++-+..+...+ ...++-..+-+
T Consensus 21 svs~~Va~~i~~l~~sGl~y---~~~pm~T~IEG--------e~devm~vv~~~~e~~~~-g~~RV~~~iKi 80 (100)
T 2epi_A 21 SVSKYVKKAIEVFKKYDLKV---ETNAMGTVLEG--------DLDEILKAFKEAHSTVLN-DVDRVVSSLKI 80 (100)
T ss_dssp CCHHHHHHHHHHHTTSSCEE---EEETTEEEEEE--------EHHHHHHHHHHHHHHHHT-TSSEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCe---EecCCccEEEc--------CHHHHHHHHHHHHHHHHc-CCCEEEEEEEE
Confidence 46667777888888899999 67777655542 689999988887776655 33444444444
No 101
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=23.21 E-value=1.3e+02 Score=25.82 Aligned_cols=54 Identities=13% Similarity=0.191 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHCCceEEE----EccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceE
Q psy15247 17 FAYEFIEDCSKNNVAYVE----VRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKS 78 (203)
Q Consensus 17 ~~~~~~~~~~~dgV~Y~E----lr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~ 78 (203)
.+.++.+.+.+.||...- +|++|...... -..++.++++.+.+++..++.++..
T Consensus 405 ~~~~~~~~l~~~Gv~v~~~g~~iRi~p~l~~t~--------e~i~~~l~~l~~~l~~~~~~~~~~~ 462 (476)
T 3i5t_A 405 FTLKIDERCFELGLIVRPLGDLCVISPPLIISR--------AQIDEMVAIMRQAITEVSAAHGLTA 462 (476)
T ss_dssp HHHHHHHHHHHTTEECEEETTEEEECCCTTCCH--------HHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHCCCEEEecCCEEEEECCCCCCH--------HHHHHHHHHHHHHHHHHHHHhCccc
Confidence 466778888889987653 68887643322 2466777777778877777666544
No 102
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=23.17 E-value=2.6e+02 Score=21.59 Aligned_cols=77 Identities=13% Similarity=0.170 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEeCCCCCCCccccccccccc--HHHHhC
Q psy15247 59 TVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGIDLLSIQPETGPHGSVYSYN--QKFAKD 136 (203)
Q Consensus 59 ~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~dL~G~EpE~~gHG~l~~~p--~~l~~~ 136 (203)
+...++++++++.++.|..+-++. .-..+++.-.+.++.++....++|+-....... . -+ +.+.+.
T Consensus 18 ~~~~~~~gi~~~a~~~g~~~~~~~--~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~--~--------~~~~~~~~~~ 85 (305)
T 3g1w_A 18 YWKRCLKGFEDAAQALNVTVEYRG--AAQYDIQEQITVLEQAIAKNPAGIAISAIDPVE--L--------TDTINKAVDA 85 (305)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEE--CSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTT--T--------HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCEEEEeC--CCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHH--H--------HHHHHHHHHC
Confidence 666788888888888887664432 222344455566777776666666654433221 0 12 677889
Q ss_pred CCcEE-EcCCCC
Q psy15247 137 NANFS-LNSDDP 147 (203)
Q Consensus 137 Gv~vs-inTDDp 147 (203)
|+||. ++++.|
T Consensus 86 ~iPvV~~~~~~~ 97 (305)
T 3g1w_A 86 GIPIVLFDSGAP 97 (305)
T ss_dssp TCCEEEESSCCT
T ss_pred CCcEEEECCCCC
Confidence 99865 455444
No 103
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=22.45 E-value=2.6e+02 Score=21.35 Aligned_cols=50 Identities=10% Similarity=0.060 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEE
Q psy15247 59 TVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGI 111 (203)
Q Consensus 59 ~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~ 111 (203)
+...++++++++.++.|..+ +++... .+.+...+.++.......++|+-+
T Consensus 27 ~~~~~~~gi~~~a~~~g~~~--~~~~~~-~~~~~~~~~~~~~~~~~vdgiIi~ 76 (292)
T 3k4h_A 27 FFPEVIRGISSFAHVEGYAL--YMSTGE-TEEEIFNGVVKMVQGRQIGGIILL 76 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCEE--EECCCC-SHHHHHHHHHHHHHTTCCCEEEES
T ss_pred HHHHHHHHHHHHHHHcCCEE--EEEeCC-CCHHHHHHHHHHHHcCCCCEEEEe
Confidence 66677888888888888654 333222 223333455666665555555543
No 104
>1lxj_A YBL001C, hypothetical 11.5KDA protein in HTB2-NTH2 interge region; hypothetical protein, HTB2-NTH2 intergenic region; 1.80A {Saccharomyces cerevisiae} SCOP: d.58.48.1
Probab=22.38 E-value=2e+02 Score=19.82 Aligned_cols=61 Identities=5% Similarity=-0.010 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEee
Q psy15247 13 AVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSC 84 (203)
Q Consensus 13 ~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~ 84 (203)
.+.....++++-..+.|+.| +.+|...+-.| +.+++++++-+..+...+....++-..+-+
T Consensus 21 svs~~Va~~i~~i~~sGl~y---~~~pm~T~IEG--------e~devm~vv~~~~e~~~~~G~~RV~~~iKi 81 (104)
T 1lxj_A 21 SISDFVALIEKKIRESPLKS---TLHSAGTTIEG--------PWDDVMGLIGEIHEYGHEKGYVRVHTDIRV 81 (104)
T ss_dssp CCHHHHHHHHHHHHTSSSEE---EEETTEEEEEE--------EHHHHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCe---EeCCCccEEEc--------CHHHHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 45566677777777899999 77787655542 689999988887776654423344444444
No 105
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=22.12 E-value=1.1e+02 Score=18.73 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=25.2
Q ss_pred CCcCcCCChHHHHHHHHHcCCCHHHHHHHHHH
Q psy15247 146 DPTLTGRYLNEDYQLAQSWGFTREQFKIINLN 177 (203)
Q Consensus 146 Dp~~f~t~Ls~Ey~~~~~~~l~~~~l~~l~~n 177 (203)
||.+-++++..--..+..-|||.+|+......
T Consensus 22 dp~V~~sp~~~K~~FL~sKGLt~~EI~~Al~r 53 (54)
T 3ff5_A 22 NSRVRQSPLATRRAFLKKKGLTDEEIDLAFQQ 53 (54)
T ss_dssp CTTGGGSCHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred ChhhhcCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence 78888888887666666689999998877653
No 106
>3mab_A Uncharacterized protein; NYSGXRC, PSI-2, structural genomics; 1.42A {Listeria monocytogenes} PDB: 3bqt_A
Probab=21.99 E-value=1.1e+02 Score=20.77 Aligned_cols=64 Identities=16% Similarity=0.041 Sum_probs=41.8
Q ss_pred HHHHhCCCcEEEcCCCCcCcCCChHHHHHHHHH--cCCCHHHHHHH--HHHHHHHcCCCHHHHHHHHHHHHhh
Q psy15247 131 QKFAKDNANFSLNSDDPTLTGRYLNEDYQLAQS--WGFTREQFKII--NLNAAEASFQPEHEKKELIKLLESE 199 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~f~t~Ls~Ey~~~~~--~~l~~~~l~~l--~~nai~~sF~~~~~k~~l~~~~~~~ 199 (203)
+.|.+.|| ++=..+-..+--+-|..+.+ .+.+..-+..| +..++.++-+++++|++|.+.++..
T Consensus 18 ~~L~~~GI-----~t~~~Lr~~Ga~~ay~rLk~~~~~~~~~~L~aL~gAi~G~~w~~l~~~~K~~L~~~~~~l 85 (93)
T 3mab_A 18 QDLIKAGI-----KTPVELKDVGSKEAFLRIWENDSSVCMSELYALEGAVQGIRWHGLDEAKKIELKKFHQSL 85 (93)
T ss_dssp HHHHHTTC-----CSHHHHHHHCHHHHHHHHHHHCTTCCHHHHHHHHHHHHTSCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-----CCHHHHHhCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCcHHHCCHHHHHHHHHHHHHh
Confidence 56666666 11112233455566766666 66777666444 5666788999999999999887753
No 107
>1va6_A Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} SCOP: d.128.1.4 PDB: 1v4g_A* 2d32_A* 2d33_A*
Probab=21.87 E-value=53 Score=29.62 Aligned_cols=32 Identities=19% Similarity=0.156 Sum_probs=22.2
Q ss_pred CcCCChHHHHHHHHH-cCC---CHHHHHHHHHHHHH
Q psy15247 149 LTGRYLNEDYQLAQS-WGF---TREQFKIINLNAAE 180 (203)
Q Consensus 149 ~f~t~Ls~Ey~~~~~-~~l---~~~~l~~l~~nai~ 180 (203)
=|+..++.+|..... ..+ +...+.+++..|++
T Consensus 462 ~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~S~~ 497 (518)
T 1va6_A 462 GTGKAFAEAYRNLLREEPLEILREEDFVAEREASER 497 (518)
T ss_dssp -CHHHHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 366789999977766 444 55777777777764
No 108
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=21.79 E-value=2.6e+02 Score=21.03 Aligned_cols=57 Identities=7% Similarity=-0.067 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCceEEEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcC
Q psy15247 10 DLDAVERFAYEFIEDCSKNNVAYVEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQ 75 (203)
Q Consensus 10 t~~~l~~~~~~~~~~~~~dgV~Y~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 75 (203)
..+.++...+..++.+.+.|++-+= -|...+.. .|++.+++.+.+++++.++-++.+
T Consensus 93 ~~~~L~~~y~~~L~~a~~~~~~SIA---fP~IstG~------~g~p~~~aa~i~~~~v~~~l~~~~ 149 (184)
T 1spv_A 93 EDQLLQDAYLNSLRLVAANSYTSVA---FPAISTGV------YGYPRAAAAEIAVKTVSEFITRHA 149 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEE---ECCTTSST------TCCCHHHHHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHHHHhCCceEE---eccccCCC------CCCCHHHHHHHHHHHHHHHHHhCC
Confidence 4678899999999999888876432 15444443 379999999999999998876654
No 109
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=21.58 E-value=1.9e+02 Score=24.48 Aligned_cols=40 Identities=13% Similarity=0.095 Sum_probs=28.6
Q ss_pred hcCceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 73 EFQVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 73 ~~~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
+.|+.+.+.-.+..+.+.+.+.+.++.+.+...+.|||+|
T Consensus 57 ~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavG 96 (383)
T 3ox4_A 57 AQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLG 96 (383)
T ss_dssp TTTCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeC
Confidence 4467765544455556667788888888888778899885
No 110
>3kw6_A 26S protease regulatory subunit 8; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Homo sapiens}
Probab=21.21 E-value=84 Score=19.90 Aligned_cols=28 Identities=11% Similarity=0.033 Sum_probs=22.2
Q ss_pred HHHHHH--cCCCHHHHHHHHHHHHHHcCCC
Q psy15247 158 YQLAQS--WGFTREQFKIINLNAAEASFQP 185 (203)
Q Consensus 158 y~~~~~--~~l~~~~l~~l~~nai~~sF~~ 185 (203)
+..+++ .|||-.|+.++++.|...+...
T Consensus 27 l~~la~~t~G~SGADi~~l~~eA~~~a~~~ 56 (78)
T 3kw6_A 27 LRKIAELMPGASGAEVKGVCTEAGMYALRE 56 (78)
T ss_dssp HHHHHHTCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 455555 8999999999999998777543
No 111
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=21.12 E-value=2.4e+02 Score=22.18 Aligned_cols=60 Identities=15% Similarity=0.155 Sum_probs=37.1
Q ss_pred cHHHHHHHH-HhhCCCceEEEeCCCCC----CCccc-----------cc-------------cccc--cc-----HHHHh
Q psy15247 92 TVPDTLRLA-QNCTHYGVVGIDLLSIQ----PETGP-----------HG-------------SVYS--YN-----QKFAK 135 (203)
Q Consensus 92 ~a~~~~~~a-~~~~~~~vvG~dL~G~E----pE~~g-----------HG-------------~l~~--~p-----~~l~~ 135 (203)
.+.+.+..+ .+++|+.|+-+|++|.- +|..+ -| ..+. .| +.+.+
T Consensus 49 ~~~~~l~~~i~~~~Pd~VihvG~aggr~~i~lEr~A~N~~d~ripDn~G~~P~d~~i~~~Gp~a~~stLpv~~~v~~l~~ 128 (223)
T 3ro0_A 49 KSLAVLREAMKKHQPDIIICVGQAGGRMQITPERVAINLNEARIPDNEGNQPVGEDISQGGPAAYWTGLPIKRIVEEIKK 128 (223)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEEECTTCCSBEEBSEEESCBCCSSCCTTSCCCCSBCSSTTSCSEEECCSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCEEEEeccCCCCceEEEEEEEecCCCCCCCCCCCCCCCCCCCcCCCCceeecCCCHHHHHHHHHH
Confidence 455555544 45678999999998764 34322 11 1111 45 78889
Q ss_pred CCCcEEEcCCCCcCcC
Q psy15247 136 DNANFSLNSDDPTLTG 151 (203)
Q Consensus 136 ~Gv~vsinTDDp~~f~ 151 (203)
+|+|++++.|--++..
T Consensus 129 ~gipa~vS~dAG~yvC 144 (223)
T 3ro0_A 129 EGIPAAVSYTAGTFVC 144 (223)
T ss_dssp TTCCBCCBSCCCSSHH
T ss_pred CCCCEEEeCCCCcccc
Confidence 9999999655433333
No 112
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=21.00 E-value=91 Score=26.21 Aligned_cols=16 Identities=6% Similarity=-0.091 Sum_probs=14.3
Q ss_pred HHHhCCCcEEEcCCCC
Q psy15247 132 KFAKDNANFSLNSDDP 147 (203)
Q Consensus 132 ~l~~~Gv~vsinTDDp 147 (203)
.++++|++++++||..
T Consensus 301 ~~~~~G~~~~~gtD~~ 316 (458)
T 1gkp_A 301 DALAQGFIDTVGTDHC 316 (458)
T ss_dssp HHHHTTSSCEEECCBC
T ss_pred HHHhcCCeeEEECCCC
Confidence 6899999999999964
No 113
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=20.95 E-value=2.3e+02 Score=21.43 Aligned_cols=58 Identities=12% Similarity=0.102 Sum_probs=40.7
Q ss_pred HHHHHHHHCCceE--EEEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecCCC
Q psy15247 20 EFIEDCSKNNVAY--VEVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCATKW 88 (203)
Q Consensus 20 ~~~~~~~~dgV~Y--~Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~ 88 (203)
++.+.+++.||.| .++... ... +.+.+++++++...+++..++-|....=++++.+..
T Consensus 23 ~i~~~L~~~gV~~~~~~~~~~----~~~-------~~~~~~~l~a~~~~~~~l~~~~gy~~~D~i~~~~~~ 82 (179)
T 1zrr_A 23 EIQQQLNAKGVRFERWQADRD----LGA-------APTAETVIAAYQHAIDKLVAEKGYQSWDVISLRADN 82 (179)
T ss_dssp HHHHHHHHTTCCCCCCCCSSC----CCC-------CCCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCTTC
T ss_pred HHHHHHHHcCcEEEEcCCCCc----cCC-------cccHHHHHHHHHHHHHHHHHHhCCCcccEEEEcCCC
Confidence 4567778899999 332211 111 468899999999999998888887666666666653
No 114
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=20.75 E-value=59 Score=27.38 Aligned_cols=55 Identities=11% Similarity=-0.149 Sum_probs=34.1
Q ss_pred HHHHhCCCcEEEcCCCCcC------------cC---------CChHHHHHHHHH-cCCCHHHHHHH-HHHHHHHcCCC
Q psy15247 131 QKFAKDNANFSLNSDDPTL------------TG---------RYLNEDYQLAQS-WGFTREQFKII-NLNAAEASFQP 185 (203)
Q Consensus 131 ~~l~~~Gv~vsinTDDp~~------------f~---------t~Ls~Ey~~~~~-~~l~~~~l~~l-~~nai~~sF~~ 185 (203)
..++++|++++++||.... +. +.+...+..+.. .+++.+++.++ ..|+.+.--++
T Consensus 298 ~~~~~~G~~~~lgtD~~~~~~~~k~~g~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l~~~~al~~~T~~~A~~lgl~ 375 (458)
T 1gkr_A 298 WEQLENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKLFGIY 375 (458)
T ss_dssp HHHHHHTCCCEECCCEECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHHHHHTGGGTSSCHHHHHHHHTHHHHHHHTCT
T ss_pred HHHHhCCCceEEEeCCCCCChHHhccccCCHhHCCCCcccHHHHHHHHHHHHHHhCCCCHHHHHHHHhhhHHHHhCCC
Confidence 6688999999999996322 11 122222333334 47999886544 66777765553
No 115
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=20.27 E-value=1.7e+02 Score=18.95 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=27.5
Q ss_pred CCCcCcCCChHHHHHHHHHcCCCHHHHHHHHHHH
Q psy15247 145 DDPTLTGRYLNEDYQLAQSWGFTREQFKIINLNA 178 (203)
Q Consensus 145 DDp~~f~t~Ls~Ey~~~~~~~l~~~~l~~l~~na 178 (203)
-||.+-.+++..--..+..-|||.+|+....+.+
T Consensus 26 qdp~V~~sp~~~K~~FL~sKGLt~eEI~~Al~ra 59 (70)
T 2w84_A 26 QNSRVRQSPLATRRAFLKKKGLTDEEIDMAFQQS 59 (70)
T ss_dssp CSTTGGGSCHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CChhhhhCCHHHHHHHHHHcCCCHHHHHHHHHHc
Confidence 3788888888877666666999999999888765
No 116
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=20.25 E-value=1e+02 Score=28.01 Aligned_cols=50 Identities=24% Similarity=0.169 Sum_probs=34.1
Q ss_pred hCCCcEEEcCCCCc---Cc-CCChHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCC
Q psy15247 135 KDNANFSLNSDDPT---LT-GRYLNEDYQLAQSWGFTREQFKIIN-LNAAEASFQ 184 (203)
Q Consensus 135 ~~Gv~vsinTDDp~---~f-~t~Ls~Ey~~~~~~~l~~~~l~~l~-~nai~~sF~ 184 (203)
..|++++++||+.. ++ ...+......+.+.|++.+++.+++ .|+.+.-.+
T Consensus 282 ~~g~~v~lgTD~~~p~~~~~~g~l~~~v~~~~~~Gls~~eal~~aT~n~A~~lgl 336 (608)
T 3nqb_A 282 HLPQTVTLCTDDVFPDDLLQGGGLDDVVRRLVRYGLKPEWALRAATLNAAQRLGR 336 (608)
T ss_dssp SCCTTEEEECBSCCHHHHHHTCSHHHHHHHHHHTTCCHHHHHHHHTHHHHHHHTC
T ss_pred hcCceEEEecCCCCCcchhhhcchHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC
Confidence 48999999999842 22 2466666666666899999865554 566555433
No 117
>2qyg_A Ribulose bisphosphate carboxylase-like protein 2; beta-alpha-barrel, unknown function; 3.30A {Rhodopseudomonas palustris}
Probab=20.04 E-value=4.5e+02 Score=23.11 Aligned_cols=77 Identities=13% Similarity=0.045 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCceEE---EEccCccchhhhhhhhccCCCCHHHHHHHHHHHHHHhHhhcCceEEEEEeecC
Q psy15247 10 DLDAVERFAYEFIEDCSKNNVAYV---EVRYMPHKLLGTELYQMLGYEGLKETVRRVYQGLKRGEDEFQVKSKSILSCAT 86 (203)
Q Consensus 10 t~~~l~~~~~~~~~~~~~dgV~Y~---Elr~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~rlI~~~~R 86 (203)
+++.+.+++|+++. -|+-++ |...++.+ ..+++-+..+.++++++++++|-...+.+-+.
T Consensus 198 s~~~~a~~~ye~~~----GGlDfiKDDE~l~~qpf------------~p~~eR~~~v~eai~ra~~eTGe~k~y~~NiT- 260 (452)
T 2qyg_A 198 PPQPFAELGYQSWT----GGLDIAKDDEMLADVDW------------CPLAERAALLGDACRRASAETGVPKIYLANIT- 260 (452)
T ss_dssp CSHHHHHHHHHHHH----HTCSEEECCTTCCSCTT------------SCHHHHHHHHHHHHHHHHHHHSSCCEEEEECC-
T ss_pred CHHHHHHHHHHHHh----CCCCcccCCccCCCCCC------------CcHHHHHHHHHHHHHHHHHHhCCcceecCcCC-
Confidence 67788888777655 455443 33333221 46788899999999999999986544444444
Q ss_pred CCCcccHHHHHHHHHhhC
Q psy15247 87 KWPVDTVPDTLRLAQNCT 104 (203)
Q Consensus 87 ~~~~e~a~~~~~~a~~~~ 104 (203)
-++++..+-.+.+.+.-
T Consensus 261 -~~~~eM~~Ra~~a~e~G 277 (452)
T 2qyg_A 261 -DEVDRLTELHDVAVANG 277 (452)
T ss_dssp -CCTTHHHHHHHHHHHTT
T ss_pred -CCHHHHHHHHHHHHHhC
Confidence 36777788888887763
No 118
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=20.02 E-value=1.9e+02 Score=24.19 Aligned_cols=50 Identities=16% Similarity=0.123 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhHhhcCceEEEEEeecCCCCcccHHHHHHHHHhhCCCceEEEe
Q psy15247 59 TVRRVYQGLKRGEDEFQVKSKSILSCATKWPVDTVPDTLRLAQNCTHYGVVGID 112 (203)
Q Consensus 59 ~~~~v~~~~~~~~~~~~i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~vvG~d 112 (203)
+.+.+.+.++ +.|+.+.++-.+-.+.+.+.+.+.++.+.+.+.+.|||+|
T Consensus 57 ~~~~v~~~L~----~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavG 106 (371)
T 1o2d_A 57 SLDDLKKLLD----ETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLG 106 (371)
T ss_dssp HHHHHHHHHH----HTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEE
T ss_pred HHHHHHHHHH----HcCCeEEEeCCccCCCCHHHHHHHHHHHHhcCCCEEEEeC
Confidence 3444444443 2356554443344555666778888888777778899985
Done!