Query psy15251
Match_columns 720
No_of_seqs 639 out of 4679
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 16:14:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15251.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15251hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n6r_A Propionyl-COA carboxyla 100.0 2E-113 6E-118 1000.4 55.9 654 7-718 1-681 (681)
2 3u9t_A MCC alpha, methylcroton 100.0 7E-114 2E-118 1002.9 48.0 647 5-719 25-672 (675)
3 3jrx_A Acetyl-COA carboxylase 100.0 3.5E-89 1.2E-93 778.0 46.1 451 5-461 53-564 (587)
4 3hbl_A Pyruvate carboxylase; T 100.0 1.3E-87 4.4E-92 817.5 60.4 451 6-460 2-460 (1150)
5 3glk_A Acetyl-COA carboxylase 100.0 1.4E-87 4.8E-92 763.1 40.8 445 2-452 34-539 (540)
6 3ouz_A Biotin carboxylase; str 100.0 5.2E-82 1.8E-86 708.3 52.4 444 5-452 3-446 (446)
7 3va7_A KLLA0E08119P; carboxyla 100.0 2.4E-77 8.3E-82 728.1 39.4 445 5-453 28-472 (1236)
8 2qf7_A Pyruvate carboxylase pr 100.0 6.6E-75 2.3E-79 707.7 43.9 453 6-460 12-478 (1165)
9 2dzd_A Pyruvate carboxylase; b 100.0 2.1E-71 7E-76 625.0 51.3 451 3-457 1-459 (461)
10 2vpq_A Acetyl-COA carboxylase; 100.0 2E-71 6.7E-76 623.5 49.9 447 8-455 1-447 (451)
11 1ulz_A Pyruvate carboxylase N- 100.0 3E-71 1E-75 622.0 49.3 445 7-454 1-445 (451)
12 1w96_A ACC, acetyl-coenzyme A 100.0 1.4E-71 4.9E-76 638.6 47.3 443 5-452 44-553 (554)
13 2w70_A Biotin carboxylase; lig 100.0 3.8E-70 1.3E-74 612.7 49.0 444 7-454 1-445 (449)
14 4dim_A Phosphoribosylglycinami 100.0 6.4E-52 2.2E-56 458.2 40.8 386 7-421 6-401 (403)
15 1a9x_A Carbamoyl phosphate syn 100.0 9.6E-48 3.3E-52 470.0 35.6 396 6-438 5-432 (1073)
16 4ffl_A PYLC; amino acid, biosy 100.0 1.4E-47 4.9E-52 417.6 32.7 355 8-420 1-357 (363)
17 1kjq_A GART 2, phosphoribosylg 100.0 6.4E-46 2.2E-50 408.5 44.0 380 7-422 10-391 (391)
18 3vot_A L-amino acid ligase, BL 100.0 7.1E-47 2.4E-51 420.8 36.3 390 7-422 4-415 (425)
19 2dwc_A PH0318, 433AA long hypo 100.0 5.9E-46 2E-50 414.4 41.4 390 7-425 18-418 (433)
20 4e4t_A Phosphoribosylaminoimid 100.0 1.9E-45 6.6E-50 407.3 36.2 367 7-420 34-416 (419)
21 3k5i_A Phosphoribosyl-aminoimi 100.0 1.5E-44 5.3E-49 398.6 40.3 364 8-418 24-398 (403)
22 3aw8_A PURK, phosphoribosylami 100.0 3.2E-44 1.1E-48 392.0 40.4 360 10-419 1-361 (369)
23 3ax6_A Phosphoribosylaminoimid 100.0 1.5E-42 5.2E-47 380.2 40.6 368 8-422 1-372 (380)
24 3vmm_A Alanine-anticapsin liga 100.0 3.5E-43 1.2E-47 394.5 35.6 377 32-422 52-468 (474)
25 3q2o_A Phosphoribosylaminoimid 100.0 3.5E-42 1.2E-46 378.6 42.2 358 7-415 13-376 (389)
26 2yw2_A Phosphoribosylamine--gl 100.0 3E-42 1E-46 383.4 36.5 377 10-423 2-408 (424)
27 3orq_A N5-carboxyaminoimidazol 100.0 1.1E-41 3.8E-46 372.8 36.3 360 6-415 10-373 (377)
28 3eth_A Phosphoribosylaminoimid 100.0 5.5E-42 1.9E-46 370.1 33.4 335 8-418 1-339 (355)
29 2qk4_A Trifunctional purine bi 100.0 3.9E-42 1.3E-46 385.6 32.4 386 7-428 23-444 (452)
30 2ip4_A PURD, phosphoribosylami 100.0 8.7E-41 3E-45 370.8 41.5 376 10-428 2-408 (417)
31 2z04_A Phosphoribosylaminoimid 100.0 6.4E-42 2.2E-46 373.2 31.2 361 8-425 1-362 (365)
32 1vkz_A Phosphoribosylamine--gl 100.0 2.3E-40 7.9E-45 366.7 33.5 371 8-424 15-405 (412)
33 2yrx_A Phosphoribosylglycinami 100.0 7.3E-40 2.5E-44 367.0 37.6 375 7-423 20-427 (451)
34 2xcl_A Phosphoribosylamine--gl 100.0 3.2E-39 1.1E-43 358.8 35.6 376 10-428 2-413 (422)
35 3mjf_A Phosphoribosylamine--gl 100.0 1.1E-38 3.9E-43 354.7 39.1 387 9-428 4-423 (431)
36 3lp8_A Phosphoribosylamine-gly 100.0 2.3E-38 7.8E-43 353.2 39.9 380 7-423 20-431 (442)
37 1a9x_A Carbamoyl phosphate syn 100.0 2.9E-37 9.9E-42 377.5 37.9 322 7-348 558-896 (1073)
38 2pn1_A Carbamoylphosphate synt 100.0 1.1E-34 3.7E-39 311.6 29.8 291 9-330 5-301 (331)
39 4fu0_A D-alanine--D-alanine li 100.0 5.9E-36 2E-40 324.9 19.0 301 9-322 4-343 (357)
40 4eg0_A D-alanine--D-alanine li 100.0 4.7E-33 1.6E-37 297.3 25.4 278 6-323 11-311 (317)
41 1ehi_A LMDDL2, D-alanine:D-lac 100.0 1.3E-32 4.3E-37 300.9 28.3 301 9-325 4-353 (377)
42 3e5n_A D-alanine-D-alanine lig 100.0 1.8E-33 6.2E-38 307.9 19.1 300 9-322 23-365 (386)
43 3i12_A D-alanine-D-alanine lig 100.0 4.7E-32 1.6E-36 295.0 27.7 289 20-322 24-346 (364)
44 2i87_A D-alanine-D-alanine lig 100.0 1.1E-32 3.7E-37 300.2 20.9 299 9-322 4-337 (364)
45 1iow_A DD-ligase, DDLB, D-ALA\ 100.0 1.2E-31 3.9E-36 284.4 27.1 272 8-323 2-302 (306)
46 3k3p_A D-alanine--D-alanine li 100.0 1.1E-31 3.9E-36 292.8 24.8 298 9-322 38-367 (383)
47 3lwb_A D-alanine--D-alanine li 100.0 3E-32 1E-36 297.0 19.0 307 1-324 1-366 (373)
48 3tqt_A D-alanine--D-alanine li 100.0 2.5E-31 8.6E-36 289.2 25.4 299 10-322 6-347 (372)
49 3r5x_A D-alanine--D-alanine li 100.0 7.6E-31 2.6E-35 278.7 23.3 270 10-323 5-295 (307)
50 1e4e_A Vancomycin/teicoplanin 100.0 2.6E-31 8.7E-36 287.0 19.4 297 9-323 4-337 (343)
51 3se7_A VANA; alpha-beta struct 100.0 2.8E-31 9.5E-36 287.1 18.9 298 10-322 5-336 (346)
52 2fb9_A D-alanine:D-alanine lig 100.0 1.1E-30 3.8E-35 279.5 19.7 287 10-323 5-317 (322)
53 2pvp_A D-alanine-D-alanine lig 100.0 1.9E-29 6.6E-34 274.2 20.2 231 80-329 107-350 (367)
54 1uc8_A LYSX, lysine biosynthes 100.0 3.7E-29 1.3E-33 261.4 21.5 272 11-326 2-278 (280)
55 2r85_A PURP protein PF1517; AT 100.0 5.9E-27 2E-31 251.3 27.5 262 10-303 4-291 (334)
56 2r7k_A 5-formaminoimidazole-4- 99.9 3.1E-26 1.1E-30 247.0 24.7 270 9-307 19-322 (361)
57 2pbz_A Hypothetical protein; N 99.9 6.3E-26 2.1E-30 240.1 9.1 250 10-303 4-272 (320)
58 3df7_A Putative ATP-grAsp supe 99.9 6.4E-24 2.2E-28 225.1 20.4 209 70-322 61-271 (305)
59 1gsa_A Glutathione synthetase; 99.9 2.5E-21 8.5E-26 205.4 15.7 281 10-325 3-311 (316)
60 1z2n_X Inositol 1,3,4-trisphos 99.8 8.5E-21 2.9E-25 202.7 15.2 240 9-303 12-302 (324)
61 3ln7_A Glutathione biosynthesi 99.8 1.9E-21 6.5E-26 226.8 7.6 241 67-325 433-754 (757)
62 1wr2_A Hypothetical protein PH 99.8 2.3E-19 7.8E-24 183.2 12.3 176 120-301 20-218 (238)
63 3ln6_A Glutathione biosynthesi 99.8 1.4E-19 4.9E-24 211.6 7.7 243 67-324 428-747 (750)
64 1i7n_A Synapsin II; synapse, p 99.7 1.6E-16 5.3E-21 166.9 22.1 218 80-323 68-303 (309)
65 2p0a_A Synapsin-3, synapsin II 99.7 3.1E-16 1.1E-20 166.5 20.8 220 80-325 85-322 (344)
66 1pk8_A RAT synapsin I; ATP bin 99.7 4.4E-16 1.5E-20 167.9 21.8 218 80-323 180-415 (422)
67 2cqy_A Propionyl-COA carboxyla 99.7 1.3E-17 4.5E-22 148.1 3.2 104 117-220 4-107 (108)
68 2q7d_A Inositol-tetrakisphosph 99.7 2.5E-15 8.5E-20 161.2 19.7 230 18-301 33-312 (346)
69 2kcc_A Acetyl-COA carboxylase 99.6 5.9E-16 2E-20 131.0 8.0 71 648-719 4-74 (84)
70 2dn8_A Acetyl-COA carboxylase 99.6 5.6E-15 1.9E-19 129.4 9.9 71 648-719 16-86 (100)
71 1bdo_A Acetyl-COA carboxylase; 99.6 4E-15 1.4E-19 124.8 8.6 69 650-718 5-80 (80)
72 1z6h_A Biotin/lipoyl attachmen 99.6 6.7E-15 2.3E-19 120.8 9.3 68 652-719 2-69 (72)
73 3crk_C Dihydrolipoyllysine-res 99.6 6.5E-15 2.2E-19 125.6 8.8 66 654-719 16-82 (87)
74 1ghj_A E2, E2, the dihydrolipo 99.6 7E-15 2.4E-19 123.0 8.1 66 654-719 12-77 (79)
75 1k8m_A E2 component of branche 99.5 1.1E-14 3.8E-19 125.5 7.4 65 655-719 16-80 (93)
76 1dcz_A Transcarboxylase 1.3S s 99.5 4.9E-14 1.7E-18 117.2 10.7 72 647-718 6-77 (77)
77 2dnc_A Pyruvate dehydrogenase 99.5 1.8E-14 6.1E-19 125.4 8.0 65 655-719 19-84 (98)
78 2d5d_A Methylmalonyl-COA decar 99.5 5.3E-14 1.8E-18 115.9 10.0 70 649-718 5-74 (74)
79 2l5t_A Lipoamide acyltransfera 99.5 1.6E-14 5.4E-19 120.2 6.6 67 653-719 11-77 (77)
80 2dne_A Dihydrolipoyllysine-res 99.5 2.2E-14 7.7E-19 126.9 7.7 65 655-719 19-84 (108)
81 1y8o_B Dihydrolipoyllysine-res 99.5 5.5E-14 1.9E-18 127.5 8.8 64 656-719 40-104 (128)
82 2jku_A Propionyl-COA carboxyla 99.5 9.6E-15 3.3E-19 126.3 3.2 71 648-718 24-94 (94)
83 2fp4_B Succinyl-COA ligase [GD 99.5 4.5E-14 1.5E-18 153.4 9.0 169 121-301 4-210 (395)
84 1gjx_A Pyruvate dehydrogenase; 99.4 2.3E-14 7.8E-19 120.5 2.9 68 652-719 10-77 (81)
85 2ejm_A Methylcrotonoyl-COA car 99.4 1.3E-13 4.5E-18 120.4 7.7 72 648-719 13-84 (99)
86 2nu8_B SCS-beta, succinyl-COA 99.4 9.9E-14 3.4E-18 150.6 8.4 169 121-301 4-203 (388)
87 2k7v_A Dihydrolipoyllysine-res 99.4 2.3E-14 7.7E-19 121.6 2.3 69 651-719 4-72 (85)
88 1qjo_A Dihydrolipoamide acetyl 99.4 1.5E-13 5.1E-18 115.2 6.7 63 657-719 14-76 (80)
89 3va7_A KLLA0E08119P; carboxyla 99.4 1.9E-13 6.6E-18 167.2 9.8 70 648-717 1166-1235(1236)
90 1pmr_A Dihydrolipoyl succinylt 99.4 8.9E-15 3E-19 122.7 -1.8 65 655-719 14-78 (80)
91 1iyu_A E2P, dihydrolipoamide a 99.4 4.8E-13 1.6E-17 111.8 8.6 62 657-719 13-74 (79)
92 3t7a_A Inositol pyrophosphate 99.4 3.3E-13 1.1E-17 137.8 5.8 200 81-303 58-293 (330)
93 3bg3_A Pyruvate carboxylase, m 99.3 4.5E-13 1.5E-17 154.8 4.1 71 648-718 648-718 (718)
94 2qf7_A Pyruvate carboxylase pr 99.3 3.7E-12 1.3E-16 155.9 10.6 72 647-718 1093-1164(1165)
95 1zko_A Glycine cleavage system 99.2 1.1E-11 3.9E-16 113.2 6.0 69 651-719 38-114 (136)
96 3ufx_B Succinyl-COA synthetase 99.1 2.9E-10 9.8E-15 123.7 14.6 109 121-231 4-117 (397)
97 3dva_I Dihydrolipoyllysine-res 99.1 1.1E-11 3.7E-16 135.9 0.0 63 657-719 16-78 (428)
98 1zy8_K Pyruvate dehydrogenase 99.1 1.5E-11 5.3E-16 123.0 0.0 63 656-718 16-79 (229)
99 2k32_A A; NMR {Campylobacter j 99.1 1E-10 3.5E-15 105.1 5.1 69 651-719 3-101 (116)
100 1hpc_A H protein of the glycin 98.8 1.4E-09 4.8E-14 98.9 3.4 68 652-719 30-105 (131)
101 3a7l_A H-protein, glycine clea 98.7 1.2E-08 4.2E-13 92.4 6.1 68 652-719 31-106 (128)
102 1onl_A Glycine cleavage system 98.7 1.2E-08 4.3E-13 92.3 5.9 68 652-719 30-105 (128)
103 3ne5_B Cation efflux system pr 98.2 1.2E-06 4.1E-11 96.2 7.7 69 650-718 122-239 (413)
104 2f1m_A Acriflavine resistance 98.2 3.3E-07 1.1E-11 95.0 2.0 69 651-719 24-165 (277)
105 3lnn_A Membrane fusion protein 98.2 1.4E-06 4.8E-11 93.7 6.9 70 650-719 58-204 (359)
106 3klr_A Glycine cleavage system 98.2 2.4E-06 8.2E-11 76.5 6.7 50 655-704 29-79 (125)
107 3fpp_A Macrolide-specific effl 98.2 1.3E-06 4.5E-11 93.2 5.5 70 650-719 32-189 (341)
108 1vf7_A Multidrug resistance pr 98.0 1.8E-06 6.1E-11 93.4 2.6 69 651-719 45-172 (369)
109 3mxu_A Glycine cleavage system 98.0 1E-05 3.5E-10 73.8 6.6 50 656-705 52-102 (143)
110 3tzu_A GCVH, glycine cleavage 98.0 8.6E-06 2.9E-10 74.0 5.8 49 654-702 45-94 (137)
111 1ax3_A Iiaglc, glucose permeas 97.9 8.4E-06 2.9E-10 76.5 4.6 67 648-718 11-116 (162)
112 1f3z_A EIIA-GLC, glucose-speci 97.8 1.5E-05 5E-10 74.8 5.1 65 650-718 13-116 (161)
113 2gpr_A Glucose-permease IIA co 97.8 1.4E-05 4.9E-10 74.4 4.8 65 650-718 8-111 (154)
114 4dk0_A Putative MACA; alpha-ha 97.7 2.2E-06 7.4E-11 92.6 -2.2 68 650-717 33-188 (369)
115 3tig_A TTL protein; ATP-grAsp, 97.7 0.00025 8.5E-09 75.8 13.7 157 158-330 147-364 (380)
116 3cdx_A Succinylglutamatedesucc 97.6 0.00015 5E-09 77.7 8.9 66 650-718 268-337 (354)
117 3hgb_A Glycine cleavage system 97.6 0.00011 3.7E-09 67.8 6.6 47 656-702 57-104 (155)
118 3na6_A Succinylglutamate desuc 97.4 0.00049 1.7E-08 72.9 9.7 69 648-719 256-328 (331)
119 2dn8_A Acetyl-COA carboxylase 97.0 0.00022 7.4E-09 61.7 1.8 46 674-719 5-50 (100)
120 3fmc_A Putative succinylglutam 97.0 0.0015 5.2E-08 70.0 8.5 67 649-718 290-362 (368)
121 3mwd_A ATP-citrate synthase; A 97.0 0.00083 2.9E-08 73.1 6.5 110 122-231 8-135 (425)
122 3pff_A ATP-citrate synthase; p 96.6 0.0016 5.5E-08 76.2 6.0 110 122-231 8-135 (829)
123 1z6h_A Biotin/lipoyl attachmen 96.2 0.0041 1.4E-07 49.8 4.2 32 688-719 1-32 (72)
124 2kcc_A Acetyl-COA carboxylase 96.1 0.002 6.9E-08 53.6 2.1 32 688-719 7-38 (84)
125 1bdo_A Acetyl-COA carboxylase; 96.1 0.0045 1.5E-07 50.8 4.1 32 650-681 49-80 (80)
126 2d5d_A Methylmalonyl-COA decar 96.1 0.0062 2.1E-07 48.9 4.7 33 687-719 6-38 (74)
127 3i6i_A Putative leucoanthocyan 96.0 0.05 1.7E-06 57.4 13.1 102 1-109 1-115 (346)
128 2l5t_A Lipoamide acyltransfera 96.0 0.0054 1.9E-07 49.9 4.1 32 650-681 45-76 (77)
129 1qjo_A Dihydrolipoamide acetyl 95.9 0.0052 1.8E-07 50.4 3.5 33 650-682 44-76 (80)
130 1iyu_A E2P, dihydrolipoamide a 95.9 0.0081 2.8E-07 49.1 4.7 33 650-682 42-74 (79)
131 1dcz_A Transcarboxylase 1.3S s 95.9 0.0063 2.2E-07 49.4 4.0 34 686-719 8-41 (77)
132 2qj8_A MLR6093 protein; struct 95.8 0.019 6.5E-07 60.6 8.5 65 651-718 259-327 (332)
133 3ic5_A Putative saccharopine d 95.7 0.03 1E-06 48.6 8.0 97 6-112 3-100 (118)
134 2k7v_A Dihydrolipoyllysine-res 95.7 0.0079 2.7E-07 50.0 3.8 35 649-683 39-73 (85)
135 1ghj_A E2, E2, the dihydrolipo 95.5 0.01 3.5E-07 48.5 4.0 33 650-682 45-77 (79)
136 2gpr_A Glucose-permease IIA co 95.5 0.011 3.7E-07 55.0 4.6 52 663-717 93-153 (154)
137 3n6r_A Propionyl-COA carboxyla 95.4 0.065 2.2E-06 62.2 11.7 32 650-681 650-681 (681)
138 2r6j_A Eugenol synthase 1; phe 95.4 0.063 2.2E-06 55.7 10.6 123 5-136 8-150 (318)
139 1k8m_A E2 component of branche 95.1 0.017 5.7E-07 49.0 4.1 33 650-682 48-80 (93)
140 3llv_A Exopolyphosphatase-rela 95.1 0.019 6.4E-07 52.2 4.7 92 6-105 4-95 (141)
141 3crk_C Dihydrolipoyllysine-res 95.1 0.021 7.1E-07 47.7 4.6 33 650-682 49-82 (87)
142 3our_B EIIA, phosphotransferas 94.8 0.031 1.1E-06 52.8 5.4 64 651-718 36-138 (183)
143 2jku_A Propionyl-COA carboxyla 94.7 0.014 4.8E-07 49.5 2.5 34 686-719 25-58 (94)
144 1ax3_A Iiaglc, glucose permeas 94.6 0.019 6.4E-07 53.7 3.4 55 664-718 99-161 (162)
145 2ejm_A Methylcrotonoyl-COA car 94.5 0.02 6.8E-07 49.1 3.2 34 686-719 14-47 (99)
146 2hmt_A YUAA protein; RCK, KTN, 94.5 0.065 2.2E-06 48.2 6.7 34 7-40 5-38 (144)
147 1f3z_A EIIA-GLC, glucose-speci 94.4 0.058 2E-06 50.3 6.2 32 650-681 50-116 (161)
148 1pmr_A Dihydrolipoyl succinylt 94.3 0.012 4.1E-07 48.2 1.1 33 649-681 45-77 (80)
149 2dnc_A Pyruvate dehydrogenase 94.2 0.034 1.2E-06 47.5 3.9 34 650-683 51-85 (98)
150 3fpp_A Macrolide-specific effl 94.1 0.037 1.3E-06 58.4 5.0 55 664-719 10-64 (341)
151 1gjx_A Pyruvate dehydrogenase; 94.1 0.015 5E-07 47.8 1.3 33 650-682 45-77 (81)
152 3ff4_A Uncharacterized protein 94.1 0.26 8.9E-06 43.8 9.6 99 6-112 2-112 (122)
153 3r6d_A NAD-dependent epimerase 94.1 0.37 1.3E-05 46.9 11.8 92 6-106 3-100 (221)
154 2dne_A Dihydrolipoyllysine-res 94.0 0.042 1.4E-06 47.8 4.1 34 650-683 51-85 (108)
155 1y8o_B Dihydrolipoyllysine-res 93.9 0.05 1.7E-06 48.8 4.5 34 650-683 71-105 (128)
156 2xha_A NUSG, transcription ant 93.7 0.054 1.8E-06 51.7 4.5 47 663-715 23-98 (193)
157 2duw_A Putative COA-binding pr 93.4 0.59 2E-05 42.7 11.1 101 8-116 13-128 (145)
158 3d4r_A Domain of unknown funct 93.4 0.079 2.7E-06 48.8 4.9 52 651-702 102-154 (169)
159 3u9t_A MCC alpha, methylcroton 93.3 0.09 3.1E-06 60.9 6.6 117 549-682 554-672 (675)
160 3nkl_A UDP-D-quinovosamine 4-d 93.3 0.47 1.6E-05 42.7 10.2 97 7-115 3-103 (141)
161 1hdo_A Biliverdin IX beta redu 93.1 0.99 3.4E-05 42.8 12.9 72 9-89 4-76 (206)
162 3fwz_A Inner membrane protein 92.7 0.13 4.3E-06 46.7 5.3 78 5-90 4-81 (140)
163 2d59_A Hypothetical protein PH 92.6 0.98 3.4E-05 41.1 11.3 101 8-116 22-135 (144)
164 1y81_A Conserved hypothetical 92.4 0.9 3.1E-05 41.1 10.7 102 7-116 13-127 (138)
165 2k32_A A; NMR {Campylobacter j 92.3 0.065 2.2E-06 47.1 2.7 34 650-683 68-102 (116)
166 3lnn_A Membrane fusion protein 92.1 0.068 2.3E-06 56.8 3.2 60 660-719 30-90 (359)
167 3qvo_A NMRA family protein; st 92.1 0.28 9.5E-06 48.5 7.5 75 6-89 21-97 (236)
168 4egb_A DTDP-glucose 4,6-dehydr 91.6 1.5 5E-05 45.7 12.9 77 7-89 23-107 (346)
169 3slg_A PBGP3 protein; structur 91.6 0.56 1.9E-05 49.5 9.7 77 5-89 21-100 (372)
170 1qyc_A Phenylcoumaran benzylic 91.6 0.79 2.7E-05 46.8 10.5 91 8-107 4-107 (308)
171 1vf7_A Multidrug resistance pr 91.3 0.11 3.8E-06 55.5 3.7 56 663-719 21-76 (369)
172 1iuk_A Hypothetical protein TT 91.2 0.8 2.7E-05 41.6 8.9 101 8-116 13-128 (140)
173 2g1u_A Hypothetical protein TM 91.0 0.95 3.2E-05 41.4 9.4 36 7-42 18-53 (155)
174 1qyd_A Pinoresinol-lariciresin 91.0 1.2 4.1E-05 45.5 11.3 92 8-107 4-110 (313)
175 2xha_A NUSG, transcription ant 91.0 0.043 1.5E-06 52.4 0.1 46 664-715 84-157 (193)
176 3ne5_B Cation efflux system pr 90.7 0.28 9.5E-06 53.2 6.2 56 664-719 98-155 (413)
177 3dhn_A NAD-dependent epimerase 90.7 0.78 2.7E-05 44.5 9.0 72 8-89 4-76 (227)
178 3s2u_A UDP-N-acetylglucosamine 90.6 0.8 2.7E-05 48.6 9.6 101 7-109 1-119 (365)
179 3our_B EIIA, phosphotransferas 90.5 0.4 1.4E-05 45.3 6.2 28 655-682 112-139 (183)
180 3sc6_A DTDP-4-dehydrorhamnose 90.4 0.6 2.1E-05 47.2 8.2 62 7-90 3-66 (287)
181 2xhc_A Transcription antitermi 90.4 0.22 7.6E-06 52.5 4.8 48 662-715 62-138 (352)
182 2gas_A Isoflavone reductase; N 90.2 1 3.5E-05 45.9 9.9 91 8-107 2-106 (307)
183 3m2p_A UDP-N-acetylglucosamine 90.2 1.6 5.4E-05 44.7 11.3 69 8-89 2-71 (311)
184 3n6x_A Putative glutathionylsp 90.2 0.27 9.1E-06 54.0 5.4 71 132-211 339-411 (474)
185 3c1o_A Eugenol synthase; pheny 89.5 2.9 0.0001 42.8 12.8 121 7-136 3-148 (321)
186 4dk0_A Putative MACA; alpha-ha 89.4 0.068 2.3E-06 57.0 0.0 56 663-719 10-65 (369)
187 1t2a_A GDP-mannose 4,6 dehydra 89.4 1.5 5.2E-05 46.2 10.7 80 5-89 21-111 (375)
188 2wm3_A NMRA-like family domain 89.0 0.77 2.6E-05 46.8 7.8 73 8-89 5-81 (299)
189 2io8_A Bifunctional glutathion 88.5 0.56 1.9E-05 53.4 6.7 97 96-212 474-574 (619)
190 1id1_A Putative potassium chan 88.4 0.84 2.9E-05 41.7 6.8 90 8-104 3-95 (153)
191 1n7h_A GDP-D-mannose-4,6-dehyd 88.4 1.9 6.4E-05 45.6 10.6 77 7-89 27-115 (381)
192 3o9z_A Lipopolysaccaride biosy 88.0 1.2 4E-05 46.2 8.4 93 8-110 3-101 (312)
193 4id9_A Short-chain dehydrogena 88.0 2.1 7.2E-05 44.4 10.5 68 7-89 18-86 (347)
194 2c20_A UDP-glucose 4-epimerase 87.8 1.7 5.8E-05 44.8 9.5 73 9-90 2-77 (330)
195 3f8d_A Thioredoxin reductase ( 87.1 1.2 4E-05 45.5 7.7 34 7-40 14-47 (323)
196 2c5a_A GDP-mannose-3', 5'-epim 86.8 2.6 8.8E-05 44.6 10.4 74 7-89 28-102 (379)
197 3e82_A Putative oxidoreductase 86.3 0.83 2.8E-05 48.5 6.2 94 1-110 1-96 (364)
198 2yy7_A L-threonine dehydrogena 86.3 1.4 4.9E-05 44.9 7.8 73 8-89 2-77 (312)
199 2ydy_A Methionine adenosyltran 86.1 1.7 5.7E-05 44.5 8.2 67 8-89 2-69 (315)
200 3enk_A UDP-glucose 4-epimerase 86.1 2.4 8.4E-05 43.8 9.6 77 8-89 5-87 (341)
201 2q1w_A Putative nucleotide sug 85.9 2.6 8.9E-05 43.6 9.7 77 7-89 20-98 (333)
202 1p9l_A Dihydrodipicolinate red 85.9 4.7 0.00016 40.2 11.0 77 10-92 2-81 (245)
203 3l4b_C TRKA K+ channel protien 85.9 0.79 2.7E-05 44.6 5.3 87 10-103 2-88 (218)
204 4ina_A Saccharopine dehydrogen 85.7 1.5 5.1E-05 47.3 7.8 94 8-109 1-104 (405)
205 2we8_A Xanthine dehydrogenase; 85.4 18 0.00061 38.5 16.0 36 7-42 203-238 (386)
206 2dtx_A Glucose 1-dehydrogenase 85.4 4.8 0.00017 40.2 11.1 77 1-89 1-83 (264)
207 3l9w_A Glutathione-regulated p 85.1 0.33 1.1E-05 52.7 2.2 34 9-42 5-38 (413)
208 3dfz_A SIRC, precorrin-2 dehyd 85.1 0.84 2.9E-05 45.0 5.0 32 8-39 31-62 (223)
209 4ea9_A Perosamine N-acetyltran 84.7 3.5 0.00012 40.0 9.4 36 5-40 9-44 (220)
210 2jl1_A Triphenylmethane reduct 84.6 1.8 6.2E-05 43.5 7.5 89 9-106 1-99 (287)
211 3gpi_A NAD-dependent epimerase 84.4 0.94 3.2E-05 45.8 5.3 34 9-42 4-37 (286)
212 2q1s_A Putative nucleotide sug 84.4 2.2 7.4E-05 45.1 8.3 76 7-89 31-108 (377)
213 1lss_A TRK system potassium up 84.3 1.2 4.2E-05 39.3 5.4 31 10-40 6-36 (140)
214 3tpc_A Short chain alcohol deh 84.3 3.5 0.00012 40.9 9.5 84 1-90 1-91 (257)
215 3abi_A Putative uncharacterize 84.1 1.3 4.5E-05 46.9 6.4 115 10-140 18-132 (365)
216 2pzm_A Putative nucleotide sug 83.9 3.8 0.00013 42.3 9.8 75 9-89 21-97 (330)
217 2f1m_A Acriflavine resistance 83.8 0.78 2.7E-05 46.5 4.3 33 650-682 131-165 (277)
218 3dqp_A Oxidoreductase YLBE; al 83.8 4.5 0.00015 38.8 9.8 71 10-91 2-74 (219)
219 3bg3_A Pyruvate carboxylase, m 83.5 0.63 2.1E-05 53.9 3.7 33 687-719 650-682 (718)
220 3orf_A Dihydropteridine reduct 83.0 3.5 0.00012 40.8 8.8 71 6-89 20-96 (251)
221 1qsg_A Enoyl-[acyl-carrier-pro 82.9 1.4 4.9E-05 44.1 5.8 41 1-41 2-45 (265)
222 3ioy_A Short-chain dehydrogena 82.8 1.4 4.6E-05 45.8 5.8 40 1-40 1-41 (319)
223 3pdi_B Nitrogenase MOFE cofact 82.8 4.2 0.00015 44.5 10.0 85 8-109 313-397 (458)
224 3evn_A Oxidoreductase, GFO/IDH 82.7 2.5 8.5E-05 43.9 7.8 90 9-110 6-96 (329)
225 2pk3_A GDP-6-deoxy-D-LYXO-4-he 82.7 5.1 0.00017 40.9 10.2 74 6-90 10-84 (321)
226 3oa2_A WBPB; oxidoreductase, s 82.7 2.9 9.8E-05 43.4 8.2 93 8-110 3-102 (318)
227 1ek6_A UDP-galactose 4-epimera 82.7 2.2 7.7E-05 44.2 7.5 75 8-89 2-90 (348)
228 2auk_A DNA-directed RNA polyme 82.6 1.3 4.5E-05 42.4 5.1 45 663-709 64-108 (190)
229 3hbl_A Pyruvate carboxylase; T 82.4 0.88 3E-05 55.7 4.7 68 647-719 1075-1147(1150)
230 3ruf_A WBGU; rossmann fold, UD 82.1 3 0.0001 43.4 8.1 75 7-89 24-109 (351)
231 2bco_A Succinylglutamate desuc 82.0 1 3.4E-05 47.7 4.4 60 651-717 265-326 (350)
232 1rpn_A GDP-mannose 4,6-dehydra 82.0 5.6 0.00019 40.8 10.2 78 6-89 12-95 (335)
233 3ius_A Uncharacterized conserv 81.9 1.1 3.6E-05 45.3 4.4 35 6-40 3-37 (286)
234 4b79_A PA4098, probable short- 81.9 9.5 0.00033 37.8 11.3 82 1-89 2-87 (242)
235 3m2t_A Probable dehydrogenase; 81.7 1.8 6.2E-05 45.7 6.3 90 9-110 6-97 (359)
236 3e48_A Putative nucleoside-dip 81.5 7.3 0.00025 39.0 10.7 71 10-89 2-74 (289)
237 4ew6_A D-galactose-1-dehydroge 81.3 3.7 0.00013 42.7 8.5 83 8-110 25-110 (330)
238 2x4g_A Nucleoside-diphosphate- 81.3 4.6 0.00016 41.6 9.3 70 10-88 15-85 (342)
239 3c85_A Putative glutathione-re 81.3 0.88 3E-05 42.8 3.3 33 9-41 40-73 (183)
240 2dkn_A 3-alpha-hydroxysteroid 81.2 3 0.0001 40.9 7.5 69 8-90 1-72 (255)
241 3rft_A Uronate dehydrogenase; 80.8 2.7 9.3E-05 42.0 7.0 70 8-89 3-73 (267)
242 3ihm_A Styrene monooxygenase A 80.7 1.4 4.8E-05 47.7 5.2 38 2-39 16-53 (430)
243 3ay3_A NAD-dependent epimerase 80.6 1.3 4.6E-05 44.2 4.6 71 7-89 1-72 (267)
244 3dva_I Dihydrolipoyllysine-res 80.3 0.34 1.2E-05 52.7 0.0 35 650-684 46-80 (428)
245 1uay_A Type II 3-hydroxyacyl-C 80.1 6.3 0.00022 38.2 9.4 69 8-89 2-75 (242)
246 3tox_A Short chain dehydrogena 79.9 1.8 6E-05 44.0 5.3 39 1-39 1-40 (280)
247 3awd_A GOX2181, putative polyo 79.8 3 0.0001 41.2 6.9 40 1-40 4-46 (260)
248 3fhl_A Putative oxidoreductase 79.7 2.5 8.4E-05 44.7 6.5 87 9-110 6-94 (362)
249 3d3w_A L-xylulose reductase; u 79.6 3.1 0.00011 40.8 6.9 81 1-89 1-85 (244)
250 3sxp_A ADP-L-glycero-D-mannohe 79.5 5.4 0.00018 41.7 9.1 74 8-89 10-99 (362)
251 2xhc_A Transcription antitermi 78.9 0.35 1.2E-05 51.0 -0.5 46 664-715 124-197 (352)
252 3i4f_A 3-oxoacyl-[acyl-carrier 78.7 2.4 8.2E-05 42.2 5.8 83 1-89 1-94 (264)
253 4eso_A Putative oxidoreductase 78.6 2.8 9.6E-05 41.7 6.2 40 1-40 1-41 (255)
254 3q0i_A Methionyl-tRNA formyltr 78.5 6 0.00021 41.0 8.9 36 10-45 9-44 (318)
255 2axq_A Saccharopine dehydrogen 78.5 2.9 9.9E-05 45.9 6.8 91 7-110 22-117 (467)
256 3vps_A TUNA, NAD-dependent epi 78.5 2.1 7.1E-05 43.7 5.4 36 6-41 5-41 (321)
257 3e18_A Oxidoreductase; dehydro 78.5 1.3 4.4E-05 46.9 3.8 93 1-110 1-94 (359)
258 2wsb_A Galactitol dehydrogenas 78.1 4.3 0.00015 39.9 7.4 75 8-89 11-94 (254)
259 3q2i_A Dehydrogenase; rossmann 78.0 2.3 7.8E-05 44.7 5.6 91 7-110 12-104 (354)
260 3tqq_A Methionyl-tRNA formyltr 78.0 5.4 0.00019 41.3 8.3 36 10-45 4-39 (314)
261 1zy8_K Pyruvate dehydrogenase 77.9 0.45 1.5E-05 47.1 0.0 33 650-682 47-80 (229)
262 1ff9_A Saccharopine reductase; 77.9 3.4 0.00012 45.1 7.1 92 8-109 3-96 (450)
263 4hv4_A UDP-N-acetylmuramate--L 77.5 4.1 0.00014 45.0 7.7 89 7-110 21-110 (494)
264 1sb8_A WBPP; epimerase, 4-epim 77.5 5.8 0.0002 41.2 8.6 75 7-89 26-111 (352)
265 1jw9_B Molybdopterin biosynthe 77.4 3.9 0.00013 40.8 6.8 120 8-139 31-152 (249)
266 2p91_A Enoyl-[acyl-carrier-pro 77.1 3.4 0.00012 41.8 6.5 33 8-40 21-56 (285)
267 1rkx_A CDP-glucose-4,6-dehydra 77.0 8.3 0.00028 40.0 9.6 75 8-89 9-89 (357)
268 1orr_A CDP-tyvelose-2-epimeras 76.9 6 0.0002 40.8 8.5 74 9-89 2-82 (347)
269 3eag_A UDP-N-acetylmuramate:L- 76.9 5.3 0.00018 41.5 8.0 91 6-109 2-94 (326)
270 2d1y_A Hypothetical protein TT 76.7 7.1 0.00024 38.6 8.6 74 8-89 6-86 (256)
271 2nm0_A Probable 3-oxacyl-(acyl 76.6 12 0.00041 37.0 10.3 71 7-89 20-96 (253)
272 1db3_A GDP-mannose 4,6-dehydra 76.6 7.1 0.00024 40.7 9.0 77 8-89 1-87 (372)
273 1e6u_A GDP-fucose synthetase; 76.4 4.1 0.00014 41.6 6.9 61 9-90 4-65 (321)
274 2q7v_A Thioredoxin reductase; 76.3 2.2 7.6E-05 43.8 4.9 40 1-40 1-40 (325)
275 2wyu_A Enoyl-[acyl carrier pro 76.3 2.7 9.3E-05 41.9 5.4 34 7-40 7-43 (261)
276 3un1_A Probable oxidoreductase 76.2 9.7 0.00033 37.8 9.5 73 7-89 27-105 (260)
277 3ak4_A NADH-dependent quinucli 76.2 4.8 0.00017 40.0 7.2 75 8-89 12-95 (263)
278 3keo_A Redox-sensing transcrip 76.2 2 6.9E-05 41.8 4.1 91 7-109 83-176 (212)
279 3afn_B Carbonyl reductase; alp 76.1 6.6 0.00023 38.5 8.2 78 7-89 6-94 (258)
280 2aef_A Calcium-gated potassium 76.0 1.5 5E-05 43.2 3.2 89 7-105 8-96 (234)
281 3dii_A Short-chain dehydrogena 75.8 4.1 0.00014 40.2 6.5 76 7-89 1-84 (247)
282 2h7i_A Enoyl-[acyl-carrier-pro 75.8 2.8 9.5E-05 42.0 5.3 34 7-40 6-42 (269)
283 1lc0_A Biliverdin reductase A; 75.5 3.5 0.00012 42.2 6.0 90 1-110 1-94 (294)
284 3lzw_A Ferredoxin--NADP reduct 75.5 1.7 5.8E-05 44.5 3.7 33 7-39 6-38 (332)
285 1dhr_A Dihydropteridine reduct 75.4 11 0.00036 36.9 9.4 37 6-42 5-42 (241)
286 1f0k_A MURG, UDP-N-acetylgluco 75.2 13 0.00044 38.4 10.5 99 9-109 7-123 (364)
287 3it5_A Protease LASA; metallop 75.2 4.6 0.00016 38.3 6.3 55 650-718 49-103 (182)
288 2z1m_A GDP-D-mannose dehydrata 75.0 9.3 0.00032 39.2 9.3 76 9-89 4-84 (345)
289 2dc1_A L-aspartate dehydrogena 74.8 9.2 0.00032 37.4 8.8 100 10-135 2-104 (236)
290 3e9m_A Oxidoreductase, GFO/IDH 74.6 1.9 6.4E-05 45.0 3.7 91 8-110 5-96 (330)
291 3edm_A Short chain dehydrogena 74.5 7.3 0.00025 38.7 8.0 39 1-39 1-40 (259)
292 3k31_A Enoyl-(acyl-carrier-pro 74.4 5.3 0.00018 40.7 7.1 33 8-40 30-65 (296)
293 2ywr_A Phosphoribosylglycinami 74.3 4.2 0.00014 39.7 5.9 76 9-89 2-90 (216)
294 3iup_A Putative NADPH:quinone 74.3 6.3 0.00022 41.7 7.9 76 8-89 171-249 (379)
295 3dfu_A Uncharacterized protein 74.1 2.8 9.5E-05 41.5 4.6 87 9-110 7-95 (232)
296 3p19_A BFPVVD8, putative blue 73.9 5.1 0.00018 40.1 6.7 34 7-40 15-49 (266)
297 3oig_A Enoyl-[acyl-carrier-pro 73.8 7.6 0.00026 38.5 8.0 39 1-40 1-42 (266)
298 2z2v_A Hypothetical protein PH 73.8 3 0.0001 44.3 5.1 116 7-140 15-132 (365)
299 3fbs_A Oxidoreductase; structu 73.6 3.6 0.00012 41.2 5.5 33 7-39 1-33 (297)
300 1yde_A Retinal dehydrogenase/r 73.4 5.1 0.00017 40.2 6.6 33 8-40 9-42 (270)
301 4e3z_A Putative oxidoreductase 73.4 6 0.0002 39.6 7.1 81 5-90 23-114 (272)
302 3m1a_A Putative dehydrogenase; 73.2 7.3 0.00025 39.0 7.7 78 7-89 4-88 (281)
303 1zko_A Glycine cleavage system 73.2 1.6 5.6E-05 39.3 2.4 33 650-682 75-114 (136)
304 4e6p_A Probable sorbitol dehyd 73.2 5.9 0.0002 39.3 6.9 78 7-89 7-91 (259)
305 1xq6_A Unknown protein; struct 73.0 5.6 0.00019 38.7 6.7 73 7-89 3-78 (253)
306 3gem_A Short chain dehydrogena 72.8 5.5 0.00019 39.7 6.6 75 8-89 27-108 (260)
307 3kkj_A Amine oxidase, flavin-c 72.8 3.3 0.00011 40.0 4.9 29 10-38 4-32 (336)
308 1xgk_A Nitrogen metabolite rep 72.8 7.8 0.00027 40.5 8.1 72 8-87 5-80 (352)
309 2fwm_X 2,3-dihydro-2,3-dihydro 72.5 24 0.00083 34.5 11.3 71 8-89 7-83 (250)
310 3o38_A Short chain dehydrogena 72.4 4.6 0.00016 40.2 5.9 34 7-40 21-56 (266)
311 3rfo_A Methionyl-tRNA formyltr 72.2 9.2 0.00031 39.6 8.2 38 8-45 4-41 (317)
312 1z45_A GAL10 bifunctional prot 72.1 8.1 0.00028 44.5 8.7 77 7-90 10-94 (699)
313 3uuw_A Putative oxidoreductase 71.9 2.8 9.5E-05 43.1 4.2 137 8-164 6-146 (308)
314 2bw0_A 10-FTHFDH, 10-formyltet 71.6 2.5 8.4E-05 44.2 3.7 36 9-44 23-58 (329)
315 1n2s_A DTDP-4-, DTDP-glucose o 71.5 14 0.00049 36.9 9.6 62 10-90 2-64 (299)
316 2ag5_A DHRS6, dehydrogenase/re 71.5 12 0.0004 36.7 8.7 76 7-89 5-83 (246)
317 1pjq_A CYSG, siroheme synthase 71.5 6.1 0.00021 43.2 7.1 33 8-40 12-44 (457)
318 3ai3_A NADPH-sorbose reductase 71.4 6.8 0.00023 38.9 6.9 39 1-40 1-40 (263)
319 1oc2_A DTDP-glucose 4,6-dehydr 71.2 15 0.00051 37.8 9.8 76 8-90 4-85 (348)
320 3h7a_A Short chain dehydrogena 71.1 8.6 0.00029 38.0 7.6 40 1-41 1-41 (252)
321 2p5y_A UDP-glucose 4-epimerase 71.0 11 0.00037 38.2 8.5 73 10-89 2-75 (311)
322 3ged_A Short-chain dehydrogena 70.8 5.5 0.00019 39.7 6.0 34 7-40 1-35 (247)
323 2zbw_A Thioredoxin reductase; 70.3 4.2 0.00014 41.7 5.2 33 8-40 5-37 (335)
324 3vtz_A Glucose 1-dehydrogenase 70.3 22 0.00076 35.3 10.5 72 7-89 13-90 (269)
325 1tlt_A Putative oxidoreductase 70.2 4 0.00014 42.1 5.0 86 9-109 6-93 (319)
326 2ehd_A Oxidoreductase, oxidore 70.2 4.5 0.00015 39.3 5.1 34 7-40 4-38 (234)
327 3f1l_A Uncharacterized oxidore 70.1 9.3 0.00032 37.7 7.6 40 1-40 1-45 (252)
328 3ef6_A Toluene 1,2-dioxygenase 70.1 4.8 0.00017 43.1 5.8 35 7-41 1-37 (410)
329 3v2h_A D-beta-hydroxybutyrate 70.0 8.6 0.00029 38.7 7.4 35 5-39 22-57 (281)
330 2ph5_A Homospermidine synthase 69.9 58 0.002 35.5 14.1 34 8-41 13-50 (480)
331 2xdo_A TETX2 protein; tetracyc 69.8 4.8 0.00016 42.7 5.7 34 7-40 25-58 (398)
332 1vl0_A DTDP-4-dehydrorhamnose 69.6 6.9 0.00024 39.3 6.6 62 7-90 11-73 (292)
333 2pd4_A Enoyl-[acyl-carrier-pro 69.5 6.6 0.00022 39.4 6.3 35 7-41 5-42 (275)
334 3s55_A Putative short-chain de 69.5 32 0.0011 34.3 11.6 34 7-40 9-43 (281)
335 3d7l_A LIN1944 protein; APC893 69.3 9.7 0.00033 35.8 7.2 61 10-89 5-67 (202)
336 2b69_A UDP-glucuronate decarbo 69.2 5.3 0.00018 41.3 5.8 37 4-40 23-60 (343)
337 3kvo_A Hydroxysteroid dehydrog 69.2 27 0.00094 36.3 11.3 35 8-42 45-80 (346)
338 3r9u_A Thioredoxin reductase; 69.1 4.9 0.00017 40.6 5.4 33 6-38 2-35 (315)
339 3tjr_A Short chain dehydrogena 69.1 9.6 0.00033 38.8 7.6 34 7-40 30-64 (301)
340 1yo6_A Putative carbonyl reduc 68.7 13 0.00043 36.1 8.2 77 8-89 3-90 (250)
341 4fb5_A Probable oxidoreductase 68.6 5.1 0.00017 42.2 5.6 116 10-138 27-150 (393)
342 1fjh_A 3alpha-hydroxysteroid d 68.5 8.9 0.0003 37.7 7.0 69 8-90 1-72 (257)
343 3gdo_A Uncharacterized oxidore 68.4 3.4 0.00012 43.5 4.1 87 9-110 6-94 (358)
344 3ehe_A UDP-glucose 4-epimerase 68.4 4.2 0.00014 41.4 4.7 30 8-38 1-31 (313)
345 1zud_1 Adenylyltransferase THI 68.3 21 0.00071 35.4 9.7 113 8-138 28-148 (251)
346 2cfc_A 2-(R)-hydroxypropyl-COM 68.3 7.6 0.00026 38.0 6.4 34 7-40 1-35 (250)
347 3lxd_A FAD-dependent pyridine 68.3 5 0.00017 43.0 5.4 36 6-41 7-44 (415)
348 3r1i_A Short-chain type dehydr 68.3 14 0.00047 37.1 8.4 34 8-41 32-66 (276)
349 3lf2_A Short chain oxidoreduct 68.2 6.2 0.00021 39.3 5.8 40 1-40 1-41 (265)
350 1gy8_A UDP-galactose 4-epimera 68.2 18 0.0006 38.0 9.7 74 10-90 4-103 (397)
351 1uzm_A 3-oxoacyl-[acyl-carrier 68.1 22 0.00076 34.7 9.9 70 8-89 15-90 (247)
352 2vou_A 2,6-dihydroxypyridine h 68.0 5.5 0.00019 42.3 5.7 31 8-38 5-35 (397)
353 2ywl_A Thioredoxin reductase r 68.0 6.1 0.00021 36.5 5.4 33 9-41 2-34 (180)
354 3lk7_A UDP-N-acetylmuramoylala 68.0 5.1 0.00018 43.6 5.5 89 7-109 8-100 (451)
355 2xdq_B Light-independent proto 68.0 16 0.00054 40.5 9.6 86 8-109 303-394 (511)
356 3kux_A Putative oxidoreductase 67.9 10 0.00036 39.5 7.7 87 9-110 8-96 (352)
357 2pnf_A 3-oxoacyl-[acyl-carrier 67.9 7.6 0.00026 37.9 6.3 33 8-40 7-40 (248)
358 3lu0_D DNA-directed RNA polyme 67.9 3.3 0.00011 50.3 4.1 35 662-698 1002-1036(1407)
359 3rih_A Short chain dehydrogena 67.8 11 0.00037 38.4 7.6 77 8-89 41-128 (293)
360 2bka_A CC3, TAT-interacting pr 67.8 8.3 0.00028 37.4 6.6 35 8-42 18-55 (242)
361 2nu8_A Succinyl-COA ligase [AD 67.8 64 0.0022 32.6 13.4 110 7-136 6-118 (288)
362 4b8w_A GDP-L-fucose synthase; 67.7 12 0.00041 37.6 8.0 65 7-89 5-70 (319)
363 3gvc_A Oxidoreductase, probabl 67.7 6.6 0.00023 39.6 5.9 76 7-89 28-112 (277)
364 3itj_A Thioredoxin reductase 1 67.0 3.9 0.00013 41.9 4.1 34 6-39 20-53 (338)
365 3pxx_A Carveol dehydrogenase; 66.9 43 0.0015 33.2 12.0 34 7-40 9-43 (287)
366 4h15_A Short chain alcohol deh 66.9 27 0.00091 34.8 10.2 41 1-41 2-45 (261)
367 1gee_A Glucose 1-dehydrogenase 66.5 8.4 0.00029 38.0 6.4 33 7-39 6-39 (261)
368 4gx0_A TRKA domain protein; me 66.4 9.3 0.00032 42.8 7.4 85 9-105 349-433 (565)
369 3ggo_A Prephenate dehydrogenas 66.0 31 0.0011 35.3 10.8 33 6-38 31-65 (314)
370 3ajr_A NDP-sugar epimerase; L- 65.7 13 0.00045 37.6 7.9 68 10-89 1-71 (317)
371 1oi7_A Succinyl-COA synthetase 65.7 24 0.00082 35.8 9.7 109 7-136 6-118 (288)
372 4hkt_A Inositol 2-dehydrogenas 65.6 6 0.00021 40.9 5.2 117 7-138 2-119 (331)
373 3svt_A Short-chain type dehydr 65.5 9 0.00031 38.4 6.5 34 7-40 10-44 (281)
374 3u7q_A Nitrogenase molybdenum- 65.1 8.9 0.00031 42.3 6.7 88 8-109 348-439 (492)
375 3op4_A 3-oxoacyl-[acyl-carrier 65.0 9.6 0.00033 37.5 6.4 76 7-89 8-92 (248)
376 2a4k_A 3-oxoacyl-[acyl carrier 65.0 9.3 0.00032 38.1 6.3 34 7-40 5-39 (263)
377 2gv8_A Monooxygenase; FMO, FAD 65.0 6.1 0.00021 42.7 5.4 33 7-39 5-39 (447)
378 2x6t_A ADP-L-glycero-D-manno-h 64.9 7 0.00024 40.6 5.7 32 9-40 47-80 (357)
379 3rjz_A N-type ATP pyrophosphat 64.8 39 0.0013 33.2 10.6 144 8-169 5-150 (237)
380 1cyd_A Carbonyl reductase; sho 64.7 7 0.00024 38.0 5.3 81 1-89 1-85 (244)
381 3tzq_B Short-chain type dehydr 64.2 23 0.00079 35.2 9.2 76 7-89 10-94 (271)
382 3l6e_A Oxidoreductase, short-c 64.1 8.8 0.0003 37.5 5.9 33 8-40 3-36 (235)
383 2dq4_A L-threonine 3-dehydroge 64.1 5.6 0.00019 41.4 4.7 75 7-89 164-240 (343)
384 1nff_A Putative oxidoreductase 63.9 13 0.00043 36.9 7.1 33 8-40 7-40 (260)
385 3upl_A Oxidoreductase; rossman 63.8 12 0.00039 40.7 7.1 150 9-163 24-188 (446)
386 2o23_A HADH2 protein; HSD17B10 63.7 22 0.00075 34.9 8.9 77 8-89 12-95 (265)
387 2ggs_A 273AA long hypothetical 63.7 42 0.0014 32.8 11.0 65 10-90 2-67 (273)
388 3uxy_A Short-chain dehydrogena 63.7 22 0.00076 35.3 9.0 72 7-90 27-104 (266)
389 1mio_B Nitrogenase molybdenum 63.7 13 0.00043 40.7 7.6 87 8-109 312-407 (458)
390 2gek_A Phosphatidylinositol ma 63.6 17 0.00057 38.0 8.4 104 4-109 16-134 (406)
391 3auf_A Glycinamide ribonucleot 63.5 14 0.00047 36.3 7.1 77 8-89 22-111 (229)
392 3rd5_A Mypaa.01249.C; ssgcid, 63.5 8.6 0.0003 38.8 5.9 77 8-89 16-95 (291)
393 4iiu_A 3-oxoacyl-[acyl-carrier 63.5 12 0.0004 37.2 6.8 33 6-38 24-57 (267)
394 1xg5_A ARPG836; short chain de 63.4 11 0.00039 37.6 6.7 33 8-40 32-65 (279)
395 4g65_A TRK system potassium up 63.3 3.8 0.00013 44.9 3.2 72 10-88 5-76 (461)
396 2v6g_A Progesterone 5-beta-red 63.2 18 0.00061 37.4 8.5 72 9-89 2-81 (364)
397 2ae2_A Protein (tropinone redu 63.2 16 0.00055 36.0 7.7 33 8-40 9-42 (260)
398 2x5o_A UDP-N-acetylmuramoylala 63.2 58 0.002 35.0 12.8 88 8-110 5-93 (439)
399 3nrc_A Enoyl-[acyl-carrier-pro 63.1 12 0.0004 37.6 6.8 76 8-90 26-113 (280)
400 1yvv_A Amine oxidase, flavin-c 63.1 6.4 0.00022 40.3 4.9 32 8-39 2-33 (336)
401 3mtj_A Homoserine dehydrogenas 63.0 17 0.00058 39.4 8.3 111 10-136 12-132 (444)
402 3hyw_A Sulfide-quinone reducta 63.0 6.1 0.00021 42.6 4.9 32 7-38 1-34 (430)
403 2z1n_A Dehydrogenase; reductas 62.9 14 0.00049 36.4 7.3 39 1-40 1-40 (260)
404 3t4x_A Oxidoreductase, short c 62.9 13 0.00043 37.0 6.9 77 8-89 10-94 (267)
405 2a87_A TRXR, TR, thioredoxin r 62.7 5.9 0.0002 40.8 4.5 32 7-38 13-44 (335)
406 3i23_A Oxidoreductase, GFO/IDH 62.7 6.9 0.00024 40.9 5.1 90 9-110 3-94 (349)
407 3rc1_A Sugar 3-ketoreductase; 62.6 4.1 0.00014 42.7 3.3 89 9-110 28-118 (350)
408 4had_A Probable oxidoreductase 62.5 14 0.00048 38.3 7.4 92 7-110 22-115 (350)
409 1udb_A Epimerase, UDP-galactos 62.5 27 0.00093 35.6 9.6 73 10-89 2-82 (338)
410 2p10_A MLL9387 protein; putati 62.3 1E+02 0.0035 31.0 13.1 116 62-195 103-222 (286)
411 3db2_A Putative NADPH-dependen 62.3 3.5 0.00012 43.3 2.7 90 8-110 5-95 (354)
412 3ijp_A DHPR, dihydrodipicolina 62.3 16 0.00053 37.3 7.4 34 7-40 20-55 (288)
413 3qy9_A DHPR, dihydrodipicolina 62.2 39 0.0013 33.4 10.2 31 9-39 4-34 (243)
414 3grk_A Enoyl-(acyl-carrier-pro 62.1 11 0.00037 38.2 6.4 33 8-40 31-66 (293)
415 2pd6_A Estradiol 17-beta-dehyd 62.0 12 0.00041 36.9 6.5 34 7-40 6-40 (264)
416 2bc0_A NADH oxidase; flavoprot 61.9 6.9 0.00024 43.0 5.1 31 9-39 36-69 (490)
417 1spx_A Short-chain reductase f 61.8 11 0.00038 37.6 6.3 34 7-40 5-39 (278)
418 3on5_A BH1974 protein; structu 61.6 12 0.00042 39.4 6.6 50 7-56 198-248 (362)
419 1mio_A Nitrogenase molybdenum 61.5 22 0.00075 39.6 9.1 32 8-39 335-366 (533)
420 4dmm_A 3-oxoacyl-[acyl-carrier 61.5 12 0.00041 37.3 6.5 33 7-39 27-60 (269)
421 3pdi_A Nitrogenase MOFE cofact 61.5 7.8 0.00027 42.7 5.4 88 8-109 332-423 (483)
422 3rkr_A Short chain oxidoreduct 61.5 12 0.0004 37.1 6.3 33 8-40 29-62 (262)
423 4dgk_A Phytoene dehydrogenase; 61.4 5.9 0.0002 43.4 4.4 32 8-39 1-32 (501)
424 2zcu_A Uncharacterized oxidore 61.3 10 0.00036 37.6 6.0 69 10-87 1-72 (286)
425 2ew8_A (S)-1-phenylethanol deh 61.2 19 0.00065 35.3 7.8 40 1-41 1-41 (249)
426 1geg_A Acetoin reductase; SDR 61.2 12 0.0004 37.0 6.2 33 8-40 2-35 (256)
427 4e12_A Diketoreductase; oxidor 61.1 9.1 0.00031 38.7 5.5 30 8-37 4-33 (283)
428 3tfo_A Putative 3-oxoacyl-(acy 61.0 12 0.00041 37.4 6.3 33 8-40 4-37 (264)
429 2rh8_A Anthocyanidin reductase 60.9 9.3 0.00032 39.2 5.7 36 6-41 7-43 (338)
430 1w6u_A 2,4-dienoyl-COA reducta 60.9 14 0.0005 37.1 7.0 33 8-40 26-59 (302)
431 4dyv_A Short-chain dehydrogena 60.9 11 0.00037 37.8 6.0 78 7-89 27-111 (272)
432 2dt5_A AT-rich DNA-binding pro 60.8 7.3 0.00025 37.8 4.4 85 8-107 80-166 (211)
433 3bio_A Oxidoreductase, GFO/IDH 60.7 13 0.00044 38.1 6.6 84 9-110 10-94 (304)
434 1ooe_A Dihydropteridine reduct 60.7 26 0.0009 33.8 8.7 35 8-42 3-38 (236)
435 2p2s_A Putative oxidoreductase 60.6 29 0.001 35.7 9.5 144 9-165 5-153 (336)
436 2yv2_A Succinyl-COA synthetase 60.6 59 0.002 33.0 11.5 111 6-137 11-126 (297)
437 1fmt_A Methionyl-tRNA FMet for 60.5 33 0.0011 35.2 9.7 36 10-45 5-40 (314)
438 3ado_A Lambda-crystallin; L-gu 60.5 6.9 0.00024 40.6 4.4 36 3-38 1-36 (319)
439 3v2g_A 3-oxoacyl-[acyl-carrier 60.4 16 0.00056 36.4 7.2 33 7-39 30-63 (271)
440 1kyq_A Met8P, siroheme biosynt 60.4 5.9 0.0002 40.1 3.8 34 8-41 13-46 (274)
441 3cnb_A DNA-binding response re 60.4 67 0.0023 27.3 10.7 61 1-89 1-63 (143)
442 4g65_A TRK system potassium up 60.3 6.9 0.00023 42.8 4.7 94 6-107 233-327 (461)
443 3uce_A Dehydrogenase; rossmann 60.3 10 0.00036 36.4 5.6 61 8-89 6-68 (223)
444 3ohs_X Trans-1,2-dihydrobenzen 60.3 3.7 0.00012 42.7 2.3 90 9-110 3-95 (334)
445 1vdc_A NTR, NADPH dependent th 60.3 4.6 0.00016 41.4 3.1 31 8-38 8-38 (333)
446 3gvx_A Glycerate dehydrogenase 60.2 27 0.00093 35.5 8.8 33 8-40 122-154 (290)
447 2bll_A Protein YFBG; decarboxy 60.2 21 0.00071 36.5 8.2 31 10-40 2-34 (345)
448 3ksu_A 3-oxoacyl-acyl carrier 60.0 11 0.00037 37.5 5.8 31 8-38 11-42 (262)
449 2ols_A Phosphoenolpyruvate syn 59.8 2.6E+02 0.0087 32.6 18.1 46 251-298 290-335 (794)
450 4fc7_A Peroxisomal 2,4-dienoyl 59.8 13 0.00043 37.3 6.3 34 7-40 26-60 (277)
451 3tuf_B Stage II sporulation pr 59.7 10 0.00035 37.7 5.3 59 651-718 95-153 (245)
452 2vob_A Trypanothione synthetas 59.6 9.1 0.00031 43.7 5.6 98 96-211 487-588 (652)
453 4hb9_A Similarities with proba 59.5 9.6 0.00033 40.0 5.6 29 10-38 3-31 (412)
454 3nks_A Protoporphyrinogen oxid 59.5 17 0.00058 39.2 7.7 32 8-39 2-35 (477)
455 1sny_A Sniffer CG10964-PA; alp 59.3 18 0.0006 35.7 7.2 36 7-42 20-59 (267)
456 3h28_A Sulfide-quinone reducta 59.2 8.6 0.0003 41.3 5.2 33 7-39 1-35 (430)
457 3i1j_A Oxidoreductase, short c 59.2 9.1 0.00031 37.4 5.0 33 8-40 14-47 (247)
458 1yqd_A Sinapyl alcohol dehydro 59.2 8.1 0.00028 40.6 4.9 73 7-90 187-261 (366)
459 4e4y_A Short chain dehydrogena 59.2 27 0.00093 33.9 8.5 72 7-89 3-79 (244)
460 2gn4_A FLAA1 protein, UDP-GLCN 59.1 9.3 0.00032 39.7 5.3 74 8-89 21-100 (344)
461 2cf5_A Atccad5, CAD, cinnamyl 59.1 7.4 0.00025 40.8 4.5 72 7-89 180-253 (357)
462 3l6d_A Putative oxidoreductase 59.0 8 0.00027 39.6 4.7 37 1-37 1-38 (306)
463 3fmc_A Putative succinylglutam 59.0 7.2 0.00025 41.3 4.4 32 687-719 291-322 (368)
464 1xkq_A Short-chain reductase f 59.0 13 0.00045 37.2 6.2 34 7-40 5-39 (280)
465 4fcc_A Glutamate dehydrogenase 59.0 92 0.0031 33.6 13.0 113 8-141 235-374 (450)
466 3sx6_A Sulfide-quinone reducta 59.0 7.1 0.00024 42.1 4.5 32 8-39 4-38 (437)
467 3h8l_A NADH oxidase; membrane 58.9 8.2 0.00028 41.1 4.9 33 8-40 1-36 (409)
468 3aek_B Light-independent proto 58.9 18 0.00063 40.1 7.9 86 8-109 280-371 (525)
469 3nzo_A UDP-N-acetylglucosamine 58.9 22 0.00074 37.8 8.2 77 8-89 35-121 (399)
470 4ezb_A Uncharacterized conserv 58.8 34 0.0012 35.0 9.5 34 7-40 23-57 (317)
471 3rsc_A CALG2; TDP, enediyne, s 58.6 15 0.00052 38.7 7.0 33 7-39 19-56 (415)
472 2hq1_A Glucose/ribitol dehydro 58.6 32 0.0011 33.2 8.9 31 8-38 5-36 (247)
473 1e3j_A NADP(H)-dependent ketos 58.4 16 0.00056 37.9 7.1 78 7-89 168-249 (352)
474 2dpo_A L-gulonate 3-dehydrogen 58.3 7.8 0.00027 40.1 4.4 34 4-37 2-35 (319)
475 2ho3_A Oxidoreductase, GFO/IDH 58.1 8.6 0.00029 39.6 4.8 87 10-109 3-90 (325)
476 3uog_A Alcohol dehydrogenase; 58.1 7.6 0.00026 40.8 4.4 77 7-89 189-266 (363)
477 3e03_A Short chain dehydrogena 58.1 57 0.0019 32.3 10.9 35 8-42 6-41 (274)
478 1h2b_A Alcohol dehydrogenase; 58.1 5.8 0.0002 41.6 3.5 76 7-89 186-263 (359)
479 3bfp_A Acetyltransferase; LEFT 57.9 8.8 0.0003 36.4 4.4 33 7-39 2-34 (194)
480 3da8_A Probable 5'-phosphoribo 57.6 8.8 0.0003 37.4 4.4 77 7-89 11-99 (215)
481 3ip3_A Oxidoreductase, putativ 57.6 2.8 9.6E-05 43.7 0.9 92 9-110 3-96 (337)
482 1fmc_A 7 alpha-hydroxysteroid 57.6 12 0.0004 36.6 5.5 33 8-40 11-44 (255)
483 3rui_A Ubiquitin-like modifier 57.5 18 0.00062 37.7 7.0 121 8-138 34-169 (340)
484 3euw_A MYO-inositol dehydrogen 57.4 6 0.0002 41.2 3.4 90 8-110 4-94 (344)
485 3nyw_A Putative oxidoreductase 57.4 8.4 0.00029 38.0 4.4 39 1-40 1-40 (250)
486 3c1a_A Putative oxidoreductase 57.3 4.5 0.00015 41.7 2.4 149 1-165 2-153 (315)
487 1zh8_A Oxidoreductase; TM0312, 57.3 5.9 0.0002 41.3 3.3 95 4-110 14-111 (340)
488 1c0p_A D-amino acid oxidase; a 57.2 13 0.00044 38.6 6.1 32 8-39 6-37 (363)
489 3m6i_A L-arabinitol 4-dehydrog 57.2 4.9 0.00017 42.2 2.7 82 7-89 179-261 (363)
490 3ip1_A Alcohol dehydrogenase, 57.1 7.3 0.00025 41.6 4.1 79 6-90 212-292 (404)
491 4dry_A 3-oxoacyl-[acyl-carrier 57.1 11 0.00037 38.0 5.2 33 8-40 33-66 (281)
492 3ko8_A NAD-dependent epimerase 57.0 7.1 0.00024 39.6 3.8 32 10-41 2-34 (312)
493 3pk0_A Short-chain dehydrogena 57.0 13 0.00046 36.7 5.9 34 7-40 9-43 (262)
494 3uko_A Alcohol dehydrogenase c 57.0 11 0.00038 39.7 5.5 77 7-89 193-272 (378)
495 3e1t_A Halogenase; flavoprotei 56.9 7 0.00024 43.2 4.1 38 1-39 1-38 (512)
496 3is3_A 17BETA-hydroxysteroid d 56.9 24 0.00083 35.0 7.8 32 8-39 18-50 (270)
497 3ucx_A Short chain dehydrogena 56.9 15 0.0005 36.5 6.1 34 7-40 10-44 (264)
498 2rhc_B Actinorhodin polyketide 56.9 17 0.00058 36.3 6.6 33 8-40 22-55 (277)
499 1r0k_A 1-deoxy-D-xylulose 5-ph 56.8 71 0.0024 33.8 11.6 127 7-138 3-148 (388)
500 1kew_A RMLB;, DTDP-D-glucose 4 56.8 39 0.0013 34.7 9.7 76 10-90 2-83 (361)
No 1
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=100.00 E-value=1.7e-113 Score=1000.37 Aligned_cols=654 Identities=38% Similarity=0.649 Sum_probs=515.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
|||||||+|||++|++++++|+++|++++++|++++..+.++++||+.++++|.+..++|+|.+.|+++|++.++|+|||
T Consensus 1 m~~kiLIanrGeia~riiraar~lGi~~vav~sd~d~~a~~~~~aD~~~~i~p~~~~~syld~~~i~~~a~~~~~daI~p 80 (681)
T 3n6r_A 1 MFNKILIANRGEIACRVIKTARKMGISTVAIYSDADKQALHVQMADEAVHIGPPPANQSYIVIDKVMAAIRATGAQAVHP 80 (681)
T ss_dssp -CCCBCBSCCHHHHHHHHHHHGGGSCCBCCEECSTTSSCHHHHHSSCCEECSSSSGGGTTSCHHHHHHHHHHTCCSCCBC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEEcCCCCCChhHHhCCEEEEcCCCCcccCccCHHHHHHHHHHhCcCEEEE
Confidence 68999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeec
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAV 166 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~ 166 (720)
+|||++|++.+++.|++.|++|+||++++++.++||..+|++|+++|||+||++...+.+.+++.++++++|||+||||.
T Consensus 81 g~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~dK~~~k~~l~~~GVPvpp~~~~~~~s~~e~~~~a~~igyPvVvKp~ 160 (681)
T 3n6r_A 81 GYGFLSENSKFAEALEAEGVIFVGPPKGAIEAMGDKITSKKIAQEANVSTVPGYMGLIEDADEAVKISNQIGYPVMIKAS 160 (681)
T ss_dssp CSSSSTTCHHHHHHHHTTTCCCSSSCHHHHHHTTSHHHHHHHHHTTTCCCCCC---------------------------
T ss_pred CCCccccCHHHHHHHHHcCCceECCCHHHHHHhCCHHHHHHHHHHcCcCcCCccccCcCCHHHHHHHHHhcCCcEEEEEC
Confidence 99999999999999999999999999999999999999999999999999998744588999999999999999999999
Q ss_pred CCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeEEE
Q psy15251 167 RGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKIIE 246 (720)
Q Consensus 167 ~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~e 246 (720)
.|+||+||++|++.+|+.++++.+.+++.+.|+++.++||+||+|++|+++++++|++|+++++++|+|+++++|+++++
T Consensus 161 ~ggggkGv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEe~I~g~rei~V~v~~d~~G~vv~l~~rd~s~qr~~~k~~e 240 (681)
T 3n6r_A 161 AGGGGKGMRIAWNDQEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLCDSHGNGIYLGERECSIQRRNQKVVE 240 (681)
T ss_dssp ------------------------------------------CCSCEEEEEEEECCSSSCCEEEEEEECCCEETTEECEE
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCcEEEEEEEEeCCCCEEEEeeeecceeccCccEEE
Confidence 99999999999999999999999999988899999999999999889999999999999999999999999999999999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcCC
Q psy15251 247 EAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASGQ 326 (720)
Q Consensus 247 ~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G~ 326 (720)
++|++.++++.+++|.+.+.++++++||+|++|+||+++ ++|++||||||||+|++|+++|++||+|++++++++++|+
T Consensus 241 ~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~d-~dg~~~~lEiNpR~~~~~~~te~~tGvdl~~~~l~~a~G~ 319 (681)
T 3n6r_A 241 EAPSPFLDEATRRAMGEQAVALAKAVGYASAGTVEFIVD-GQKNFYFLEMNTRLQVEHPVTELITGVDLVEQMIRVAAGE 319 (681)
T ss_dssp EESCSSCCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEEC-TTSCCCCCEEECSCCTTHHHHHHHHTCCHHHHHHHHHTSC
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEe-CCCCEEEEecccccCCCcHHhHHHhCCCHHHHHHHHHCCC
Confidence 999988999999999999999999999999999999999 7889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCC-------------------CcEEEeecccCCCeeC
Q psy15251 327 ELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHS-------------------DTIRIETGVIEGDEVS 387 (720)
Q Consensus 327 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~-------------------~~vr~d~~v~~G~~v~ 387 (720)
++++.+.++...||++++|+|+|||.++|+|++|+|..++.|..+ ++||+|+++.+|+.|+
T Consensus 320 ~l~~~~~~~~~~g~ai~~ri~aedp~~~f~p~~G~i~~~~~p~~~~~~~~~~~~~w~~d~~~~~~~vr~d~~~~~g~~v~ 399 (681)
T 3n6r_A 320 PLSITQGDVKLTGWAIENRLYAEDPYRGFLPSIGRLTRYRPPAETAAGPLLVNGKWQGDAPSGEAAVRNDTGVYEGGEIS 399 (681)
T ss_dssp CCSSCTTTCCCCSEEEEEEEESEEGGGTTEECCEECSCEECCCC--------------------CCEEEEESCCTTCEEC
T ss_pred CCCCCccccceeEEEEEEEEecCCcccccCCCCcEEEEEECCCCCcccccccccccccccccCCCcEEEEccccCCCccC
Confidence 999999899999999999999999999999999999999999732 4899999999999999
Q ss_pred CCCCCceEEEEEEcCCHHHHHHHHHHHhhcceEeccccCHHHHHHhccCccccccccccccccccccccccCCCCch-HH
Q psy15251 388 VHYDPMISKLVVWDENRTLALNKMKQALSQYQIAGLDTNINFLINLCSNDHFIQGDIHTGFIDQHKDELLTRTLPQT-EI 466 (720)
Q Consensus 388 ~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~~~~-~~ 466 (720)
++||||+||+|+||+||++|+++|.+||++++|+|+.||++||+++|.||+|++|+++|+||++++++++....++. ..
T Consensus 400 ~~yd~~iak~i~~g~~r~~a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~~~~~~~ 479 (681)
T 3n6r_A 400 MYYDPMIAKLCTWAPTRAAAIEAMRIALDSFEVEGIGHNLPFLSAVMDHPKFISGDMTTAFIAEEYPEGFEGVNLPETDL 479 (681)
T ss_dssp TTSCCEEEEEEEEESSHHHHHHHHHHHHHHCEECSSCCSHHHHHHHHHCHHHHHCCCCSSHHHHHCTTSCCCCCCCHHHH
T ss_pred CCCCCceeEEEEEcCCHHHHHHHHHHHHhcCEEECccCCHHHHHHHhCCHhhccCCcccchhhhccccccCCCCCChhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988876654432 22
Q ss_pred HHHHHHHHHHHHhhhHHHHHhhccCCccccccccccccccchhhhHHHHHHHHHhhHHhhhhccCCcccccccccccCCc
Q psy15251 467 ILQAALSLVLKQIQDAKLEKAKSNGNVFSLLTGFRMNHSHVKTAALSLVLKQIQDAKLEKAKSNRNVFSLLTGFRMNHSH 546 (720)
Q Consensus 467 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 546 (720)
...+|+++++.. ....+ . ..++....|||++...
T Consensus 480 ~~~~~~~~~~~~-------~~~~~-------------------------------------~--~~~~~~~~~~~~~~~~ 513 (681)
T 3n6r_A 480 RRVAAAAAAMHR-------VAEIR-------------------------------------R--TRVSGRMDNHERRVGT 513 (681)
T ss_dssp HHHHHHHHHHHH-------HHHHH-------------------------------------H--TTCTTCCTTCCCCCCS
T ss_pred HHHHHHHHHHHH-------Hhhhc-------------------------------------c--cccccCCCccccCCCc
Confidence 233333333322 00000 0 0112224689987766
Q ss_pred eEEEEEEECCEEEEEEEEEeCcEEEEEEeCCCeeEEEEeecccccccCCceeEEEeeecCe-EEEEEEEECCeEEEEEcC
Q psy15251 547 VKTVQIQHLNKEYNVQVTLSAHTYRVSIRGDPSSELCIKNASLTQVSKYGYELVAEGEKGR-IRSSVVCLDGSVSVFTKT 625 (720)
Q Consensus 547 ~~~~~~~~~~~~~~v~v~~~~~~~~v~i~~~~~~~v~~~~~~~~~~~~~~~~l~~~~i~g~-~~~~~~~~~~~~~~~~~~ 625 (720)
.+.+.+ ++..+.++++...+.|.+.+.+|..+.+.. .+. .+...+.+. +||. +..++...++.++++..+
T Consensus 514 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~-~dG~~~~~~~~~~~~~~~l~~~g 584 (681)
T 3n6r_A 514 EWVVTL--QGADFPVTIAADHDGSTVSFDDGSSMRVTS---DWT---PGDQLANLM-VDGAPLVLKVGKISGGFRIRTRG 584 (681)
T ss_dssp EEEEEC--SSCEEEEEEEECSSCEEEEETTSCEEEEEE---CCC---TTCSEEEEE-ETTEEEEEEEEEETTEEEEECSS
T ss_pred CEEEEE--CCEEEEEEEEEcCCeEEEEEeCCcEEEEEE---Eec---CCCeEEEEE-ECCEEEEEEEEEeCCEEEEEECC
Confidence 666655 788899999886667998883456666654 333 233346667 8998 777888888889998888
Q ss_pred ceEEEEecCCC------CCCCCCCCCCCCCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEE
Q psy15251 626 GSYQFNLPGKS------YSLEPEDSALSDPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEE 699 (720)
Q Consensus 626 g~~~~~~~~~~------~~~~~~~~~~~~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~ 699 (720)
..+.+....+. .+. .....++.+.|+|||||+|++|+|++||+|++||+|++||+||||++|+||.+|+|++
T Consensus 585 ~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamKm~~~i~ap~~G~v~~ 662 (681)
T 3n6r_A 585 ADLKVHVRTPRQAELARLMP--EKLPPDTSKMLLCPMPGLIVKVDVEVGQEVQEGQALCTIEAMKMENILRAEKKGVVAK 662 (681)
T ss_dssp CCEEEEEECHHHHHHHTTSC--CCCCCCCCSEEECCSCEEEEEECCCTTCEECTTCEEEEEECSSCEEEEECSSSEEEEE
T ss_pred eEEEEEecCchhhhhccccc--cccCCCCCCeEECCCcEEEEEEEeCCCCEEcCCCEEEEEEecCceeEEECCCCeEEEE
Confidence 88887755431 111 2222345678999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCcccCCCeEEEEe
Q psy15251 700 IFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 700 ~~~~~g~~v~~g~~l~~i~ 718 (720)
+.+++||+|..|++|++|+
T Consensus 663 i~~~~G~~v~~g~~l~~i~ 681 (681)
T 3n6r_A 663 INASAGNSLAVDDVIMEFE 681 (681)
T ss_dssp ECCCTTCEECTTCEEEEEC
T ss_pred EEeCCcCEeCCCCEEEEEC
Confidence 9999999999999999985
No 2
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=100.00 E-value=6.8e-114 Score=1002.90 Aligned_cols=647 Identities=41% Similarity=0.708 Sum_probs=496.9
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 5 SCVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 5 ~~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.+||+||||+|+|+++++++++|+++|+++++++++++..+.++++||+.++++|.+...+|+|.+.|+++|++.++|+|
T Consensus 25 ~~m~~kILI~g~Geia~~iiraar~lGi~~vav~s~~d~~a~~~~~AD~~~~i~~~~~~~syld~~~i~~~a~~~~~daI 104 (675)
T 3u9t_A 25 YRSIQRLLVANRGEIACRVMRSARALGIGSVAVHSDIDRHARHVAEADIAVDLGGAKPADSYLRGDRIIAAALASGAQAI 104 (675)
T ss_dssp CCCCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHTCSEEEECCCSSGGGTTTCHHHHHHHHHHTTCSEE
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCchhHhhCCEEEEcCCCccccCccCHHHHHHHHHHhCcCEE
Confidence 34799999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred EeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEe
Q psy15251 85 HPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIK 164 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvK 164 (720)
||||||++|++.++++|++.|++|+||++++++.++||..+|++|+++|||+||++...+.+.+++.++++++|||+|||
T Consensus 105 ~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GVpvpp~~~~~~~s~~e~~~~a~~igyPvvvK 184 (675)
T 3u9t_A 105 HPGYGFLSENADFARACEEAGLLFLGPPAAAIDAMGSKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIGYPVLLK 184 (675)
T ss_dssp ECCSSTTTTCHHHHHHHHTTTCEESSCCHHHHHHHTSHHHHHHHHHHTTCCBCCCCCSCCCCTTHHHHHHHHSCSSBCCB
T ss_pred EeCCcccccCHHHHHHHHHcCCceeCCCHHHHHHhchHHHHHHHHHHcCcCcCCccccCCCCHHHHHHHHHhCCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999988666789999999999999999999
Q ss_pred ecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeE
Q psy15251 165 AVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKI 244 (720)
Q Consensus 165 p~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~ 244 (720)
|..|+||+||++|++.+|+.++++.+.+++...|+++.+++|+||+|++|+++++++|++|+++++++|+|+++++|+++
T Consensus 185 p~~G~Gg~Gv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEeyI~g~reiev~v~~d~~G~vv~l~~rd~s~qr~~qk~ 264 (675)
T 3u9t_A 185 AAAGGGGKGMKVVEREAELAEALSSAQREAKAAFGDARMLVEKYLLKPRHVEIQVFADRHGHCLYLNERDCSIQRRHQKV 264 (675)
T ss_dssp CCC------CCCBCCTTTHHHHHSCCCC--------CCCBCCBCCSSCBCEEEEEEECSSSCEEEEEEEECCCBSSSSBC
T ss_pred ECCCCCCccEEEECCHHHHHHHHHHHHHHHHHhcCCCcEEEEeecCCCcEEEEEEEEcCCCCEEEEeccccceeeccceE
Confidence 99999999999999999999999998888888898899999999998899999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHc
Q psy15251 245 IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVAS 324 (720)
Q Consensus 245 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~ 324 (720)
++++|++.++++.+++|.+.+.++++++||+|++|+||+++ ++|++||||||||+|++|+++|++||+|++++++++++
T Consensus 265 ie~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~-~dG~~~~iEiNpR~~~~~~~te~~tGvdl~~~~l~~a~ 343 (675)
T 3u9t_A 265 VEEAPAPGLGAELRRAMGEAAVRAAQAIGYVGAGTVEFLLD-ERGQFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVAR 343 (675)
T ss_dssp EEEESCSSCCHHHHHHHHHHHHHHHHHTTCCSEEEEECCBC-TTSCBCBCEEESSCCTTHHHHHHTTTCCHHHHHHHHHT
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEEEc-CCCCEEEEeccccccCCchhhhhhcCCCHHHHHHHHHC
Confidence 99999988999999999999999999999999999999999 78899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCH
Q psy15251 325 GQELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENR 404 (720)
Q Consensus 325 G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~ 404 (720)
|+++++.|.++..+||++++|+|+|||.++|.|++|+|..+..|..+++||+|+++.+|+.|+++||||+||+|++|+||
T Consensus 344 G~~l~~~~~~~~~~g~ai~~ri~aedp~~~f~P~~G~l~~~~~p~~~~gvr~d~~~~~G~~v~~~~ds~la~vi~~g~~r 423 (675)
T 3u9t_A 344 GEALPLTQEQVPLNGHAIEVRLYAEDPEGDFLPASGRLMLYREAAAGPGRRVDSGVREGDEVSPFYDPMLAKLIAWGETR 423 (675)
T ss_dssp TCCCSCCTTTCCCCSEEEEEEEESCCTTTTSCCCCCBCSEEECCCCCTTEEEEESCCTTCBCCTTSCCEEEEEEEEESSH
T ss_pred CCCCCCCccccccCcceeEEEEEeccCcccccCCCCEEEEEECCCCCCCEEEEecccCCCEeCCCCCCceEEEEEEeCCH
Confidence 99999998889999999999999999999999999999999999447899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcceEeccccCHHHHHHhccCccccccccccccccccccccccCCCCchHHHHHHHHHHHHHHhhhHHH
Q psy15251 405 TLALNKMKQALSQYQIAGLDTNINFLINLCSNDHFIQGDIHTGFIDQHKDELLTRTLPQTEIILQAALSLVLKQIQDAKL 484 (720)
Q Consensus 405 ~ea~~~~~~al~~~~i~G~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 484 (720)
++|++++.+||++++|+|+.||++||+++|.||+|++|+++|+||++++++++.+...+...++++|++++...
T Consensus 424 ~~a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 497 (675)
T 3u9t_A 424 EEARQRLLAMLAETSVGGLRTNLAFLRRILGHPAFAAAELDTGFIARHQDDLLPAPQALPEHFWQAAAEAWLQS------ 497 (675)
T ss_dssp HHHHHHHHHHHHTCEEESSCCTHHHHHHHHTCHHHHTTCCCTTHHHHTHHHHSCCCCCCCHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHhhcEEEECccCCHHHHHHHhCCHHHhCCCcccchhhhcchhhcCCCCCChHHHHHHHHHHHHHH------
Confidence 99999999999999999999999999999999999999999999999999988765443333333333222221
Q ss_pred HHhhccCCccccccccccccccchhhhHHHHHHHHHhhHHhhhhccCCcccccccccccCCceEEEEEEECCEEEEEEEE
Q psy15251 485 EKAKSNGNVFSLLTGFRMNHSHVKTAALSLVLKQIQDAKLEKAKSNRNVFSLLTGFRMNHSHVKTVQIQHLNKEYNVQVT 564 (720)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~v~v~ 564 (720)
..... +..++.+||....|||++....+.+.|..+++.+.+.++
T Consensus 498 -~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (675)
T 3u9t_A 498 -EPGHR-----------------------------------RDDDPHSPWSRNDGWRSALARESDLMLRCRDERRCVRLR 541 (675)
T ss_dssp -CCCCC-----------------------------------BTTBTTCGGGCCSCCCSSSCEEEECCEEETTEEECCEEE
T ss_pred -hhhhh-----------------------------------ccccccCcccccccccccCCccEEEEEEECCEEEEEEEE
Confidence 00000 001234678888899999988889999999999888877
Q ss_pred EeCcEEEEEEeCCCeeEEEEeecccccccCCceeEEEeeecCe-EEEEEEEECCeEEEEEcCceEEEEecCCCCCCCCCC
Q psy15251 565 LSAHTYRVSIRGDPSSELCIKNASLTQVSKYGYELVAEGEKGR-IRSSVVCLDGSVSVFTKTGSYQFNLPGKSYSLEPED 643 (720)
Q Consensus 565 ~~~~~~~v~i~~~~~~~v~~~~~~~~~~~~~~~~l~~~~i~g~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 643 (720)
...+ +.+.. . ++ .+.+. ++|. +..++...++.++++..++.+.+....|... ..
T Consensus 542 ~~~~-~~~~~---------------~---~~--~~~~~-~~G~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~---~~ 596 (675)
T 3u9t_A 542 HASP-SQYRL---------------D---GD--DLVSR-VDGVTRRSAALRRGRQLFLEWEGELLAIEAVDPIAE---AE 596 (675)
T ss_dssp ESSS-CSEEE---------------E---TT--EEEEE-ETTEEEEEEEEEETTEEEEECSSSEEEEEECCHHHH---HC
T ss_pred EcCC-eEEEe---------------c---CC--eEEEE-ECCEEEEEEEEEeCCEEEEEECCeEEEEEEcCcccc---cc
Confidence 6322 22211 1 11 24455 8888 7777788889999999999998886554221 11
Q ss_pred CCCCCCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 644 SALSDPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 644 ~~~~~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
...+.++.|+|||||+|++|+|++||+|++||+|++||+|||+++|+||.+|+|+++.+++||+|..|++|++|++
T Consensus 597 ~~~~~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~~ 672 (675)
T 3u9t_A 597 AAHAHQGGLSAPMNGSIVRVLVEPGQTVEAGATLVVLEAMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELDE 672 (675)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred cccCCCCeEECCCCEEEEEEEeCCCCEEcCCCEEEEEEecceeEEEECCCCeEEEEEEeCCcCCcCCCCEEEEEec
Confidence 1224567899999999999999999999999999999999999999999999999999999999999999999975
No 3
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=100.00 E-value=3.5e-89 Score=778.00 Aligned_cols=451 Identities=38% Similarity=0.582 Sum_probs=398.5
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHc---------CCcEEEEeeCCC--CCCcccccccEEEEeCCCCCcccccCHHHHH
Q psy15251 5 SCVLDSILIANRGEIACRIMRTAKKM---------GIRVVSVYSDID--ADALHVKMADEAYRLEGKSSLDTYLNQAKIL 73 (720)
Q Consensus 5 ~~~~~~iLI~~~G~~a~~iira~~~~---------G~~~v~v~s~~d--~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~ 73 (720)
.+|||||||+|||++|++++|+||++ |+++|++|++.| ..++++++||+++++++.+..++|+|.+.|+
T Consensus 53 ~~~~~kvLIanrGeiA~riira~r~lG~e~f~~e~Gi~tVav~s~~D~~~~a~~~~~ADe~v~i~~~~~~~syld~~~Il 132 (587)
T 3jrx_A 53 DRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELIV 132 (587)
T ss_dssp CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHH
T ss_pred CcccCEEEEECChHHHHHHHHHHHHhhhccccccCCceEEEEecccccCcCChhhHhCCEEEEeCCCCccccccCHHHHH
Confidence 46899999999999999999999987 799999998666 8999999999999999888889999999999
Q ss_pred HHHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCccc------------
Q psy15251 74 DIAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYH------------ 141 (720)
Q Consensus 74 ~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~------------ 141 (720)
++|++.++|+|||||||++|++.++++|++.|++|+||++++++.++||..+|++|+++|||+||+..
T Consensus 133 ~~a~~~~vdaV~pG~GflsEn~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~ak~ll~~aGVPvpp~~~~~l~~~~~~~~~ 212 (587)
T 3jrx_A 133 DIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDL 212 (587)
T ss_dssp HHHHHTTCSEEECCSSTTTTCTHHHHHHHTTTCEESSCCHHHHHHHCSHHHHHHHHHHTTCCBCCBTTTTCCCCC-----
T ss_pred HHHHHhCCCEEEeCCCccccCHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCeeccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ---------------CCCCCHHHHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEe
Q psy15251 142 ---------------GEDQNEEILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLE 206 (720)
Q Consensus 142 ---------------~~~~s~~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvE 206 (720)
+.+.+.+++.++++++|||+||||..|+||+||++|++.+|+.++++.+.+++. ++.++||
T Consensus 213 ~~~~~~~~~~~~~~~~~v~s~eea~~~a~~iGyPvVVKp~~GgGGkGv~iV~s~eEL~~a~~~a~~~~~----~~~vlVE 288 (587)
T 3jrx_A 213 QQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIP----GSPIFLM 288 (587)
T ss_dssp -CCCCCCCCHHHHHTTSCCSHHHHHHHHHHHCSSEEEEETTCCSSSSEEEECSTTTHHHHHHHHHHHST----TCCEEEE
T ss_pred ccccccccchhhccccccCCHHHHHHHHHhcCCeEEEEeCCCCCCCCeEEeCCHHHHHHHHHHHHhhcc----CCCEEEE
Confidence 237889999999999999999999999999999999999999999998887643 6799999
Q ss_pred ccccCCceEEEEEEEcccccEEEEEeeeccccccceeEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC
Q psy15251 207 KYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDP 286 (720)
Q Consensus 207 eyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~ 286 (720)
+||+|++|++|++++|++|+++++++|+|+++++++|.++++|++.++++.+++|.+.+.++++++||+|++++||+++
T Consensus 289 eyI~g~rei~V~vl~D~~G~vv~l~~rd~siqrr~qk~ie~aPa~~l~~~~~~~i~~~A~~~a~alGy~G~~~VEfl~d- 367 (587)
T 3jrx_A 289 KLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYLYS- 367 (587)
T ss_dssp ECCCSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEC-
T ss_pred EecCCCcEEEEEEEEcCCCCEEEEeeeeccccccccceeEecCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEe-
Confidence 9999889999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred CCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcCCCCC--------------------CCCCC--CCcCeeEEEE
Q psy15251 287 SSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASGQELP--------------------LKQED--LQLRGHSFET 344 (720)
Q Consensus 287 ~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G~~l~--------------------~~~~~--~~~~g~ai~~ 344 (720)
++|++||||||||+|++|+++|++||+|++++++++++|++|+ +.|.+ +.++||||+|
T Consensus 368 ~dG~~yflEINpRl~~e~~vte~~tGvdlv~~~lria~G~pL~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~ghaie~ 447 (587)
T 3jrx_A 368 QDGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHVIAA 447 (587)
T ss_dssp SSSCEEEEEEESSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCSSSCSSCCCCCSEEEEE
T ss_pred CCCCEEEEEEeCCCCCccceeccccCCCHHHHHHHHHCCCCcccchhcccccccccccccccccccccccCCCCceEEEE
Confidence 7889999999999999999999999999999999999999986 22332 5689999999
Q ss_pred EEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCHHHHHHHHHHHhhcceEec-c
Q psy15251 345 RIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENRTLALNKMKQALSQYQIAG-L 423 (720)
Q Consensus 345 ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G-~ 423 (720)
|||+|||.++|+|++|+|..+.+|. +++||.+.++..+..|++|||||+||||+||+||++|+++|.+||++++|+| +
T Consensus 448 Ri~aedp~~~f~p~~G~i~~~~~~~-~~~v~~~~~~~~~~~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~g~~ 526 (587)
T 3jrx_A 448 RITSENPDEGFKPSSGTVQELNFRS-SKNVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDF 526 (587)
T ss_dssp EEEC----------CCCCEEEECSS-CTTEEEEECCC----------CCEEEEEEEESSHHHHHHHHHHHHHHHHHSSTT
T ss_pred eecccCccccCCCCCcEEEEEEeCC-CCceEEeccccccCCcCcccCcccceEEEEcCCHHHHHHHHHHHHhccEEeCCC
Confidence 9999999999999999999999998 5899987777666679999999999999999999999999999999999999 8
Q ss_pred ccCHHHHHHhccCccccccccccccccccccccccCCC
Q psy15251 424 DTNINFLINLCSNDHFIQGDIHTGFIDQHKDELLTRTL 461 (720)
Q Consensus 424 ~tn~~~l~~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~ 461 (720)
.||++||+++|+||+|++|+++|+||++++++++.+..
T Consensus 527 ~tn~~~~~~~~~~~~f~~g~~~t~~~~~~~~~~~~~~~ 564 (587)
T 3jrx_A 527 RTTVEYLINLLETESFQNNDIDTGWLDYLIAEKVQAEK 564 (587)
T ss_dssp SSTTHHHHHHHTSHHHHTTCSCCGGGGC----------
T ss_pred CCcHHHHHHHhCChhhccCCcchhHHhHhhhhhcccCC
Confidence 99999999999999999999999999999988876543
No 4
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=1.3e-87 Score=817.49 Aligned_cols=451 Identities=43% Similarity=0.742 Sum_probs=416.1
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCC-CCcccccCHHHHHHHHHHcCCCEE
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGK-SSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~-~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
+||+||||+|+|+++++++|+|+++|+++++++++++..+.|++++|+.+++++. ...++|+|.+.|+++|++.++|+|
T Consensus 2 ~~~kkVLIagrGeia~riiraa~elGi~vVav~s~~d~~s~~~~~ADe~~~ig~~~~~~~syld~~~Ii~~a~~~~~DaI 81 (1150)
T 3hbl_A 2 KQIKKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSLHRYKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAI 81 (1150)
T ss_dssp -CCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCGGGGTSSEEEECCTTSCTTGGGTCHHHHHHHHHHTTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCcccchhhhhcceeeecCCCCCccccccCHHHHHHHHHHhCCCEE
Confidence 4689999999999999999999999999999999999999999999999999765 345799999999999999999999
Q ss_pred EeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEe
Q psy15251 85 HPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIK 164 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvK 164 (720)
||+|||++|++.++++|++.|++|+||++++++.++||..+|++|+++|||+||+....+.+.+++.++++++|||+|||
T Consensus 82 ~pg~gflsE~~~~a~~le~~Gi~~iGp~~eai~~~~DK~~~r~ll~~aGIPvpp~~~~~v~s~eea~~~a~~iGyPvVVK 161 (1150)
T 3hbl_A 82 HPGYGFLSENEQFARRCAEEGIKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLMIK 161 (1150)
T ss_dssp ECTTTTSTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSCBCSSSTTTTTGGGTCSSEEEE
T ss_pred EECCCcccccHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCcCCCCccccCCCCHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999998444788889988999999999999
Q ss_pred ecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeE
Q psy15251 165 AVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKI 244 (720)
Q Consensus 165 p~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~ 244 (720)
|..|+||+||++|++.+|+.++++.+.+++...|+++.+++|+||+|++|+++++++|++|+++++++|+|+++++|++.
T Consensus 162 P~~GgGg~Gv~vv~s~eeL~~a~~~a~~~a~~~fg~~~vlVEeyI~G~reieV~vl~d~~G~vv~l~er~~s~qr~~~k~ 241 (1150)
T 3hbl_A 162 ATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKV 241 (1150)
T ss_dssp CCC-------CEECCSSSCTHHHHSSSSSCC------CBEEECCCSSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEE
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEccCCCcEEEEEEEEeCCCCEEEEEeeccceeccCcee
Confidence 99999999999999999999999988877777788899999999998899999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHc
Q psy15251 245 IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVAS 324 (720)
Q Consensus 245 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~ 324 (720)
++.+|++.++++.+++|.+.+.++++++||+|++|+||+++ ++ ++||||||||+|++|+++|++||+|++++++++++
T Consensus 242 ~e~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~vEflvd-~d-~~y~iEINpR~~g~~~vte~~tGvDlv~~~i~ia~ 319 (1150)
T 3hbl_A 242 VEVAPSVGLSPTLRQRICDAAIQLMENIKYVNAGTVEFLVS-GD-EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAA 319 (1150)
T ss_dssp EEESSCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEE-TT-EEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHT
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEE-CC-eEEEEEEeCCCCCCcceeehhcCCCHHHHHHHHHC
Confidence 99999988999999999999999999999999999999999 55 79999999999999999999999999999999999
Q ss_pred CCCCCC------CCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeec-ccCCCeeCCCCCCceEEE
Q psy15251 325 GQELPL------KQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETG-VIEGDEVSVHYDPMISKL 397 (720)
Q Consensus 325 G~~l~~------~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~-v~~G~~v~~~~d~~~a~v 397 (720)
|++++. .|.++..+||+++||+|+|||.++|.|++|.|..++.|. ++|+|+|++ +.+|+.|+++||||+||+
T Consensus 320 G~~L~~~~~~~~~q~~i~~~G~ai~~Ri~aedp~~~f~P~~G~i~~~~~p~-~~gvr~d~~~~~~G~~v~~~yds~lakv 398 (1150)
T 3hbl_A 320 GADLFGEEINMPQQKDITTLGYAIQCRITTEDPLNDFMPDTGTIIAYRSSG-GFGVRLDAGDGFQGAEISPYYDSLLVKL 398 (1150)
T ss_dssp TCCTTSTTTCCCCGGGCCCCSEEEEEEECSEEGGGTSEECCCCCCEEECCC-CTTEEEEESSCSSSCCCCTTSCCCSEEE
T ss_pred CCCCCccccccccccccccceEEEEEEEeccCCccccCCCCceEEEEEcCC-CCceeccccccccCCEeCCcCCCceeEE
Confidence 999885 577888999999999999999999999999999999997 699999987 789999999999999999
Q ss_pred EEEcCCHHHHHHHHHHHhhcceEeccccCHHHHHHhccCccccccccccccccccccccccCC
Q psy15251 398 VVWDENRTLALNKMKQALSQYQIAGLDTNINFLINLCSNDHFIQGDIHTGFIDQHKDELLTRT 460 (720)
Q Consensus 398 i~~g~~~~ea~~~~~~al~~~~i~G~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~~~~~~~~~ 460 (720)
|++|+||++|++++++||++++|+|++||++||+++|.||+|++|+++|+||++| ++||...
T Consensus 399 i~~g~~~~eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~-~~~~~~~ 460 (1150)
T 3hbl_A 399 STHAISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSGDYTTKFIEET-PELFDIQ 460 (1150)
T ss_dssp EEEESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHHCHHHHHSCCCTTHHHHC-GGGGCCC
T ss_pred EEEeCCHHHHHHHHHHHHhceEEeCccCCHHHHHHHhCCHHHcCCCcccchhhCC-HhhccCC
Confidence 9999999999999999999999999999999999999999999999999999987 5555543
No 5
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=100.00 E-value=1.4e-87 Score=763.11 Aligned_cols=445 Identities=38% Similarity=0.586 Sum_probs=374.9
Q ss_pred CCccCCCCEEEEEcCcHHHHHHHHHHHHc---------CCcEEEEeeCCC--CCCcccccccEEEEeCCCCCcccccCHH
Q psy15251 2 TIASCVLDSILIANRGEIACRIMRTAKKM---------GIRVVSVYSDID--ADALHVKMADEAYRLEGKSSLDTYLNQA 70 (720)
Q Consensus 2 ~~~~~~~~~iLI~~~G~~a~~iira~~~~---------G~~~v~v~s~~d--~~~~~~~~aD~~~~i~~~~~~~~~~~~~ 70 (720)
+...+|||||||+|||++|++++|+||++ |+++|++|++.| ..+++.++||+++++++.+..++|+|.+
T Consensus 34 ~~~~~~~~kvLianrGeia~riira~r~lg~e~~~~e~gi~~Vav~s~~D~~~~a~~~~~ADe~~~i~~~~~~~sy~d~~ 113 (540)
T 3glk_A 34 FGGDRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVE 113 (540)
T ss_dssp TTCSCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHH
T ss_pred cCCcccccEEEEECChHHHHHHHHHHHHhccccccccCCcEEEEEEcCcccCcCChhHHhCCEEEEeCCCCcccccccHH
Confidence 34467899999999999999999999987 799999998655 8999999999999999888889999999
Q ss_pred HHHHHHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCccc---------
Q psy15251 71 KILDIAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYH--------- 141 (720)
Q Consensus 71 ~i~~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~--------- 141 (720)
.|+++|++.++|+|||||||++|++.++++|++.|++|+||++++++.++||..+|++|+++|||+||+..
T Consensus 114 ~ii~~a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~ll~~~GVPvp~~~~~~l~~~~~~ 193 (540)
T 3glk_A 114 LIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTE 193 (540)
T ss_dssp HHHHHHHHTTCSEEECCSSGGGGCTHHHHHHHHTTCEESSCCHHHHC---CHHHHHHHHHHTTCCBCCBTTTTCCCCCCC
T ss_pred HHHHHHHHhCCCEEEeCCCccccCHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred ------------------CCCCCHHHHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcE
Q psy15251 142 ------------------GEDQNEEILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKV 203 (720)
Q Consensus 142 ------------------~~~~s~~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~ 203 (720)
+.+.+.+++.++++++|||+||||..|+||+||++|++.+|+.++++.+.+++. ++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~v~s~~ea~~~a~~igyPvVVKp~~ggGG~Gv~iv~~~~eL~~a~~~~~~~~~----~~~v 269 (540)
T 3glk_A 194 DDLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIP----GSPI 269 (540)
T ss_dssp TTC----CCCCCHHHHHHTSCCSHHHHHHHHHHHCSSEEEEETTCC----EEEECSTTTHHHHHHHHHHHST----TCCE
T ss_pred cccccccccccccccccccCcCCHHHHHHHHHhcCCcEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhhcc----CCCE
Confidence 227889999999999999999999999999999999999999999998887643 6789
Q ss_pred EEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEE
Q psy15251 204 LLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFI 283 (720)
Q Consensus 204 lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~ 283 (720)
+||+||+|++|++|++++|++|+++++++|+|+++++|+|.++++|++.++++.+++|.+.+.++++++||+|++++||+
T Consensus 270 lVEe~I~g~rei~V~vl~d~~G~vv~l~~rd~s~qr~~~k~ie~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~VEf~ 349 (540)
T 3glk_A 270 FLMKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYL 349 (540)
T ss_dssp EEEECCSSEEEEEEEEEECTTSCEEEEEEEEEEEC---CCSEEEESCTTSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred EEEEecCCCcEEEEEEEEcCCCCEEEEeceeeeeeecccceEEecCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEE
Confidence 99999998899999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred EeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcCCCCC--------------------CCCC--CCCcCeeE
Q psy15251 284 MDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASGQELP--------------------LKQE--DLQLRGHS 341 (720)
Q Consensus 284 ~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G~~l~--------------------~~~~--~~~~~g~a 341 (720)
++ ++|++||||||||+|++|++++++||+|++++++++++|++|+ +.|. ++.++|||
T Consensus 350 ~d-~dg~~~~lEiNpR~~~~~~vte~~tGvdl~~~~lr~a~G~pL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~a 428 (540)
T 3glk_A 350 YS-QDGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHV 428 (540)
T ss_dssp EE-TTSCEEEEEEECSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCSSCCSCCCSCCC----CCCSEE
T ss_pred Ec-CCCCEEEEEEECCCCCcchhhHhHhCCCHHHHHHHHHCCCCcccccccccccccccccccccccccccccCCCceeE
Confidence 99 7889999999999999999999999999999999999999986 2222 25689999
Q ss_pred EEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCHHHHHHHHHHHhhcceEe
Q psy15251 342 FETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENRTLALNKMKQALSQYQIA 421 (720)
Q Consensus 342 i~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~ 421 (720)
|+||||+|||.++|+|++|+|..+.+|. ++++|.+.++..+..|++|||||+||||+||+||++|+++|.+||++++|+
T Consensus 429 ie~ri~aedp~~~f~p~~G~i~~~~~~~-~~~v~~~~~~~~~~~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~ 507 (540)
T 3glk_A 429 IAARITSENPDEGFKPSSGTVQELNFRS-SKNVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIR 507 (540)
T ss_dssp EEEEEC------------CCEEECCCSS-CCSEEEEEEC------------CEEEEEEEESSHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEeccCCcccccCCceEEEEEEcCC-CCcEEEEeccccCCCCCCccCcccceEEEEcCCHHHHHHHHHHHHhccEEe
Confidence 9999999999999999999999999998 589998777766667999999999999999999999999999999999999
Q ss_pred c-cccCHHHHHHhccCcccccccccccccccc
Q psy15251 422 G-LDTNINFLINLCSNDHFIQGDIHTGFIDQH 452 (720)
Q Consensus 422 G-~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~ 452 (720)
| +.||++||+++|.||+|++|+++|+||+++
T Consensus 508 g~~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~ 539 (540)
T 3glk_A 508 GDFRTTVEYLINLLETESFQNNDIDTGWLDYL 539 (540)
T ss_dssp ----HHHHHHHHHHHSHHHHHTCC--------
T ss_pred cccCCcHHHHHHHhCChhhcCCCccchhhhhc
Confidence 9 899999999999999999999999999976
No 6
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=100.00 E-value=5.2e-82 Score=708.29 Aligned_cols=444 Identities=46% Similarity=0.765 Sum_probs=427.7
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 5 SCVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 5 ~~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.+|||||||+|+|+++++++++|+++|+++++++++++..+.+.+++|+.++++|.+..++|.|.+.|++++++.++|+|
T Consensus 3 ~m~~~kiLI~g~g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~i 82 (446)
T 3ouz_A 3 AMEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLKYADASICIGKARSSESYLNIPAIIAAAEIAEADAI 82 (446)
T ss_dssp TTCCCEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHHHHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSEE
T ss_pred ccccceEEEECCCHHHHHHHHHHHHcCCEEEEEEcCcccccchHhhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCEE
Confidence 45789999999999999999999999999999999999999999999999999888888999999999999999999999
Q ss_pred EeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEe
Q psy15251 85 HPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIK 164 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvK 164 (720)
+|+|||++|+..+++.|++.|++++||++++++.++||..+|++|+++|||+||++...+.+.+++.++++++|||+|+|
T Consensus 83 ~p~~g~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~~~~~~~e~~~~~~~~g~PvvvK 162 (446)
T 3ouz_A 83 FPGYGFLSENQNFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILK 162 (446)
T ss_dssp ECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSSCCSHHHHHHHHHHHCSSEEEE
T ss_pred EECCcccccCHHHHHHHHHCCCceECcCHHHHHHhCCHHHHHHHHHHcCCCcCCCcccCCCCHHHHHHHHHHhCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999997323889999999999999999999
Q ss_pred ecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeE
Q psy15251 165 AVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKI 244 (720)
Q Consensus 165 p~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~ 244 (720)
|..|+||+||++|++.+|+.++++.+.+++...|+++.+++|+||+|++|+++++++|++|+++++++++|+++++|++.
T Consensus 163 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~d~~g~~~~~~~~~~~~~~~~~~~ 242 (446)
T 3ouz_A 163 AAAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDSFGNVIHVGERDCSMQRRHQKL 242 (446)
T ss_dssp ETTCCTTCSEEEECSGGGHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEE
T ss_pred ECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCCcEEEEEEEEcCCCCEEEEeeceeeeeecCceE
Confidence 99999999999999999999999999999888898999999999998899999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHc
Q psy15251 245 IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVAS 324 (720)
Q Consensus 245 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~ 324 (720)
++.+|++.++++..++|.+.+.++++++||+|++|+||+++ ++|++||||||||++++++++++++|+|++++++++++
T Consensus 243 ~~~~p~~~l~~~~~~~l~~~a~~~~~~lg~~G~~~ve~~~~-~~g~~~~iEiNpR~~g~~~~~~~~~G~dl~~~~~~~~~ 321 (446)
T 3ouz_A 243 IEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFEFLVD-KNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAE 321 (446)
T ss_dssp EEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-TTCCEEEEEEESSCCTTHHHHHHHHCCCHHHHHHHHHT
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEEEe-CCCCEEEEEeECCCCCcceeeeeeeCCCHHHHHHHHHC
Confidence 99999988999999999999999999999999999999999 67889999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCH
Q psy15251 325 GQELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENR 404 (720)
Q Consensus 325 G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~ 404 (720)
|++++ .+.++..+||++++|+|+|+| .+|.|++|.|..+.+|. ++++|+++++.+|+.|+++|||++|++|++|+|+
T Consensus 322 G~~l~-~~~~~~~~g~ai~~ri~ae~~-~~~~p~~G~i~~~~~p~-~~~vr~~~~~~~G~~v~~~~d~~~~~vi~~g~~~ 398 (446)
T 3ouz_A 322 GYALP-SQESIKLNGHSIECRITAEDS-KTFLPSPGKITKYIPPA-GRNVRMESHCYQDYSVPAYYDSMIGKLVVWAEDR 398 (446)
T ss_dssp TCCCC-CGGGCCCCSEEEEEEEESBCT-TTCCBCCEECSEEECCC-STTEEEEECCCTTCEECTTTCCEEEEEEEEESSH
T ss_pred CCCCC-cCCCCCcceEEEEEEeeccCC-CccCCCCcEEeEEecCC-CCCEEEEcccccCCEeCCccCCcceEEEEEcCCH
Confidence 99998 677788999999999999999 88999999999999997 6899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcceEeccccCHHHHHHhccCcccccccccccccccc
Q psy15251 405 TLALNKMKQALSQYQIAGLDTNINFLINLCSNDHFIQGDIHTGFIDQH 452 (720)
Q Consensus 405 ~ea~~~~~~al~~~~i~G~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~ 452 (720)
++|++++.++|++++|+|+.||++||+++|.||+|++|+++|+||++|
T Consensus 399 ~~a~~~~~~al~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (446)
T 3ouz_A 399 NKAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDTNYLARH 446 (446)
T ss_dssp HHHHHHHHHHHHHCEEESSCCTHHHHHHHHTCHHHHTTCCCTTHHHHC
T ss_pred HHHHHHHHHHHhhCEEeCccCCHHHHHHHhCChhhccCCccccccccC
Confidence 999999999999999999999999999999999999999999999874
No 7
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=100.00 E-value=2.4e-77 Score=728.14 Aligned_cols=445 Identities=41% Similarity=0.742 Sum_probs=361.5
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 5 SCVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 5 ~~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
++|||||||+|+|+++++++++|+++|+++++++++++..+.+.+++|+.+++++.+..++|+|.+.|+++|++.++|+|
T Consensus 28 ~~m~kkILI~grGeia~~iiraar~lGi~vVaV~s~~d~~a~~~~~ADe~~~i~p~~~~~syld~~~Il~~a~~~~iDaI 107 (1236)
T 3va7_A 28 KKPFETVLIANRGEIAVRIMKTLKRMGIKSVAVYSDPDKYSQHVTDADFSVALHGRTAAETYLDIDKIINAAKKTGAQAI 107 (1236)
T ss_dssp CCSCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHHSSEEEECCCSSTTTTTTCHHHHHHHHHHTTCSEE
T ss_pred cCCCCEEEEEcCCHHHHHHHHHHHHCCCEEEEEEcCCCcCchhhhhCCEEEEeCCCcccccccCHHHHHHHHHHhCCCEE
Confidence 35799999999999999999999999999999999999999999999999999888888999999999999999999999
Q ss_pred EeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEe
Q psy15251 85 HPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIK 164 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvK 164 (720)
||+|||++|+..+++.|++.|++|+||++++++.++||..+|++|+++|||+||++ ..+.+.+++.++++++|||+|||
T Consensus 108 ~pg~g~lsEn~~~a~~le~~Gi~~iGps~eai~~~~DK~~ak~ll~~aGIPvpp~~-~~v~s~eea~~~a~~iGyPvVVK 186 (1236)
T 3va7_A 108 IPGYGFLSENADFSDRCSQENIVFVGPSGDAIRKLGLKHSAREIAERAKVPLVPGS-GLIKDAKEAKEVAKKLEYPVMVK 186 (1236)
T ss_dssp ECCSSGGGGCHHHHHHHHTTTCEESSCCHHHHHHHHSTTHHHHHHHHTTCCCCC--------------------------
T ss_pred EECCccccccHHHHHHHHHCCCCeeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCee-EecCCHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999965 23788999999999999999999
Q ss_pred ecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeE
Q psy15251 165 AVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKI 244 (720)
Q Consensus 165 p~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~ 244 (720)
|..|+||+||++|++.+|+.++++.+.+++.+.|+++.++|||||+|++|+++++++|++|++++++++||+++++|+++
T Consensus 187 P~~GgGGkGV~iv~s~eEL~~a~~~~~~~a~~~~~~~~vlVEeyI~G~rEisV~vl~Dg~g~vv~l~~rd~s~qr~~~k~ 266 (1236)
T 3va7_A 187 STAGGGGIGLQKVDSEDDIERVFETVQHQGKSYFGDAGVFMERFVNNARHVEIQMMGDGFGKAIAIGERDCSLQRRNQKV 266 (1236)
T ss_dssp ----------------------------------------------CCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEE
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhccCCCcEEEeeccCCCeEEEEEEEecCCceEEEEeeeeeeeeecCcce
Confidence 99999999999999999999999999988888888899999999998899999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHc
Q psy15251 245 IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVAS 324 (720)
Q Consensus 245 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~ 324 (720)
++.+|++.++++.+++|.+.+.++++++||+|++++||++++++|++||||||||+|++|+++++++|+|++++++++++
T Consensus 267 ~e~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~VEfivd~d~g~~y~iEINpRl~g~~~~te~vtGvDlv~~~l~~a~ 346 (1236)
T 3va7_A 267 IEETPAPNLPEATRAKMRAASERLGSLLKYKCAGTVEFIYDEQRDEFYFLEVNARLQVEHPITEMVTGLDLVEWMLRIAA 346 (1236)
T ss_dssp EEEESCSSCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHT
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCCCcEEEEEEECCCCCccHHHHHHHCCCHHHHHHHHHC
Confidence 99999988999999999999999999999999999999999334889999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCH
Q psy15251 325 GQELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENR 404 (720)
Q Consensus 325 G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~ 404 (720)
|+++++.+.++..+||++++|+|+|+|.++|.|++|.+..+..|. ++|+++++.+|++|+++||||+|++|++|+|+
T Consensus 347 G~~l~~~~~~~~~~g~Ai~~riyaedp~~~f~p~~G~i~~~~~p~---gvrvd~~v~~G~~V~~~yds~la~vi~~g~~r 423 (1236)
T 3va7_A 347 NDSPDFDNTKIEVSGASIEARLYAENPVKDFRPSPGQLTSVSFPS---WARVDTWVKKGTNVSAEYDPTLAKIIVHGKDR 423 (1236)
T ss_dssp TCCCCGGGCCCCCCSEEEEEEEESEETTTTTEECCEECCEEECCT---TSEEEECCCTTCEECSSSCCEEEEEEEEESSH
T ss_pred CCCCCCccccccccceEEEEEEecCCcccccCCCCceEEEEEcCC---ccEecccccCCCEeCCCCCCceEEEEEEeCCH
Confidence 999998877788899999999999999999999999999999986 48999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcceEeccccCHHHHHHhccCccccccccccccccccc
Q psy15251 405 TLALNKMKQALSQYQIAGLDTNINFLINLCSNDHFIQGDIHTGFIDQHK 453 (720)
Q Consensus 405 ~ea~~~~~~al~~~~i~G~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~~ 453 (720)
++|+++++++|++++|+|+.||++||++++.||+|++|+++|+||+++.
T Consensus 424 ~eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~ 472 (1236)
T 3va7_A 424 NDAIMKLNQALNETAVYGCITNIDYLRSIASSKMFKEAKVATKVLDSFD 472 (1236)
T ss_dssp HHHHHHHHHHHHTCEEESSCCSHHHHHHHHHCHHHHHTCCCTTGGGGCC
T ss_pred HHHHHHHHHHhhCEEEeCcccCHHHHHHHhCCHHHhCCCCcchhhhhcC
Confidence 9999999999999999999999999999999999999999999999863
No 8
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=6.6e-75 Score=707.71 Aligned_cols=453 Identities=39% Similarity=0.723 Sum_probs=362.2
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCC-------CCcccccCHHHHHHHHHH
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGK-------SSLDTYLNQAKILDIAVR 78 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~-------~~~~~~~~~~~i~~~a~~ 78 (720)
.|++||||+|||++|++++++|+++|+++++++++++..+.+.++||+.+++++. ...++|+|.+.|+++|++
T Consensus 12 ~~~~~~lianrGeia~riiraa~elGi~vvav~s~~d~~a~~~~~ADe~~~i~~~~~~~~~~~~~~~yld~~~I~~~a~~ 91 (1165)
T 2qf7_A 12 GPISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLALHRFKADESYQVGRGPHLARDLGPIESYLSIDEVIRVAKL 91 (1165)
T ss_dssp CCCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCHHHHSSSSEEECSCSTTSSSCCCTTHHHHCHHHHHHHHHH
T ss_pred CcceEEEEcCCcHHHHHHHHHHHHcCCEEEEEECCCcccchhHHhCCEEEEcCCcccccccCCccccccCHHHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999764 455789999999999999
Q ss_pred cCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhC
Q psy15251 79 SQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIG 158 (720)
Q Consensus 79 ~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig 158 (720)
.++|+|||+|||++|++.+++.|++.|++|+||++++++.++||..+|++|+++|||+||+..+.+++.+++.++++++|
T Consensus 92 ~~iD~V~pg~g~lsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GIPvp~~~~~~v~s~eea~~~a~~ig 171 (1165)
T 2qf7_A 92 SGADAIHPGYGLLSESPEFVDACNKAGIIFIGPKADTMRQLGNKVAARNLAISVGVPVVPATEPLPDDMAEVAKMAAAIG 171 (1165)
T ss_dssp HTCSEEECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBC---------------------
T ss_pred hCCCEEEECCCchhcCHHHHHHHHHcCCceECCCHHHHHHHCCHHHHHHHHHHcCCCCCCeeCcCCCCHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999987323788899999999999
Q ss_pred CcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeecccc
Q psy15251 159 YPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQ 238 (720)
Q Consensus 159 ~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~ 238 (720)
||+||||..|+||+||++|++.+|+.++++.+.+++...|+++.++||+||++++|+++++++|++|+++++++|+|+++
T Consensus 172 yPvVVKp~~g~GG~Gv~iv~s~eEL~~a~~~~~~~a~~~fg~~~vlVEefI~gg~EisV~vl~D~~G~vv~l~~r~~s~~ 251 (1165)
T 2qf7_A 172 YPVMLKASWGGGGRGMRVIRSEADLAKEVTEAKREAMAAFGKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDCSVQ 251 (1165)
T ss_dssp ------------------------------------------------CCCSSEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEeccCCcEEEEEEEEcCCCcEEEEEeecccce
Confidence 99999999999999999999999999999999888878888899999999998899999999999999999999999999
Q ss_pred ccceeEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHH
Q psy15251 239 RRHQKIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQW 318 (720)
Q Consensus 239 r~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~ 318 (720)
+++++.++.+|++.++++.+++|.+.+.++++++||+|++++||++++++|++||||||||+|++|+++++++|+|++++
T Consensus 252 r~~~~~~e~~Pa~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~vd~~dg~~~~iEiNpR~~~~~~vte~~tGiDl~~~ 331 (1165)
T 2qf7_A 252 RRNQKVVERAPAPYLSEAQRQELAAYSLKIAGATNYIGAGTVEYLMDADTGKFYFIEVNPRIQVEHTVTEVVTGIDIVKA 331 (1165)
T ss_dssp ETTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHH
T ss_pred ecccceEEecccccCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEECCCCCEEEEEEEcCCCCCchhhhhhhCCCHHHH
Confidence 99999999999988999999999999999999999999999999998446889999999999999999999999999999
Q ss_pred HHHHHcCCCCCC------CCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecc-cCCCeeCCCCC
Q psy15251 319 QLMVASGQELPL------KQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGV-IEGDEVSVHYD 391 (720)
Q Consensus 319 ~l~~a~G~~l~~------~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v-~~G~~v~~~~d 391 (720)
++++++|.+++. .|.++..+||+++||+++|+|.++|.|+.|.|..++.|. ++++|+|.++ .+|+.|+++||
T Consensus 332 ~i~~a~G~~l~~~~~g~p~q~~~~~~g~Ai~~ri~ae~P~~~f~p~~G~I~~~~~~~-~~gvrvd~g~~~~G~~v~~~~d 410 (1165)
T 2qf7_A 332 QIHILDGAAIGTPQSGVPNQEDIRLNGHALQCRVTTEDPEHNFIPDYGRITAYRSAS-GFGIRLDGGTSYSGAIITRYYD 410 (1165)
T ss_dssp HHHHHTTCCTTSGGGTCCCGGGCCCCSEEEEEEEESEETTTTTEECCEECCEEECCC-CTTEEEECCSCCTTCEECSSSC
T ss_pred HHHHHcCCCccccccccccccccccCcEEEEEEEEecCCccCcCCCCcEEEEEecCC-CCceEeeeccCCCCCEeCCCCC
Confidence 999999998862 345567899999999999999999999999999999886 5789999877 68999999999
Q ss_pred CceEEEEEEcCCHHHHHHHHHHHhhcceEeccccCHHHHHHhccCccccccccccccccccccccccCC
Q psy15251 392 PMISKLVVWDENRTLALNKMKQALSQYQIAGLDTNINFLINLCSNDHFIQGDIHTGFIDQHKDELLTRT 460 (720)
Q Consensus 392 ~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~~~~~~~~~ 460 (720)
+++|+++++|+|+++|+++++++|++++|+|++||++||++++.||+|.+|+++|+||+++ ++++...
T Consensus 411 ~~l~~vi~~g~t~~eA~~~~~~al~~i~i~G~~tni~~~~~~~~~~~f~~~~~~t~~~~~~-~~~~~~~ 478 (1165)
T 2qf7_A 411 PLLVKVTAWAPNPLEAISRMDRALREFRIRGVATNLTFLEAIIGHPKFRDNSYTTRFIDTT-PELFQQV 478 (1165)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHTSHHHHTTCCCTTTTTTC-GGGGCCC
T ss_pred CceEEEEEEeCCHHHHHHHHHHHhhcEEEecccCCHHHHHHHhcCHHhhcCCccchhhhcC-hhhhcCc
Confidence 9999999999999999999999999999999999999999999999999999999999998 4555443
No 9
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=100.00 E-value=2.1e-71 Score=625.01 Aligned_cols=451 Identities=42% Similarity=0.747 Sum_probs=415.6
Q ss_pred CccCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCC-CCcccccCHHHHHHHHHHcCC
Q psy15251 3 IASCVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGK-SSLDTYLNQAKILDIAVRSQC 81 (720)
Q Consensus 3 ~~~~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~-~~~~~~~~~~~i~~~a~~~~~ 81 (720)
|..+|||||||+|+|+++++++++|+++|+++++++++++..+.+.+++|+.+.+++. ...++|.|.+.|++++++.++
T Consensus 1 m~~~~~k~ILI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~y~d~~~l~~~~~~~~i 80 (461)
T 2dzd_A 1 METRRIRKVLVANRGEIAIRVFRACTELGIRTVAIYSKEDVGSYHRYKADEAYLVGEGKKPIEAYLDIEGIIEIAKAHDV 80 (461)
T ss_dssp --CCCCSEEEECSCHHHHHHHHHHHHHHTCEEEEEECGGGTTCTHHHHSSSEEECSTTSCTTGGGTCHHHHHHHHHHTTC
T ss_pred CCCCcCcEEEEECCcHHHHHHHHHHHHcCCEEEEEECCcccccchhhhCCEEEEcCCCCCccccccCHHHHHHHHHHhCC
Confidence 5566789999999999999999999999999999999888888889999999988753 334578999999999999999
Q ss_pred CEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcE
Q psy15251 82 QAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPL 161 (720)
Q Consensus 82 daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~Pv 161 (720)
|+|+|++|+++|++.++..+++.|++++||++++++.++||..+|++|+++|||+|++....+++.+++.++++++|||+
T Consensus 81 d~v~~~~g~~~E~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g~Pv 160 (461)
T 2dzd_A 81 DAIHPGYGFLSENIQFAKRCREEGIIFIGPNENHLDMFGDKVKARHAAVNAGIPVIPGSDGPVDGLEDVVAFAEAHGYPI 160 (461)
T ss_dssp CEEECCSSSSTTCHHHHHHHHHTTCEESSCCHHHHHHTTSHHHHHHHHHHTTCCBCCBCSSCCSSHHHHHHHHHHHCSCE
T ss_pred CEEEECCCccccCHHHHHHHHHcCCEEECCCHHHHHHhhCHHHHHHHHHHcCCCCCCCcccCcCCHHHHHHHHHhcCCcE
Confidence 99999999999999999999999999999999999999999999999999999999987223789999999999999999
Q ss_pred EEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccc
Q psy15251 162 MIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRH 241 (720)
Q Consensus 162 vvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~ 241 (720)
||||..|+||+||+++++.+|+.++++.+..++...|++..++||+||+|++|++++++++.+|+++.+++++|+.+++|
T Consensus 161 vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~ 240 (461)
T 2dzd_A 161 IIKAALGGGGRGMRIVRSKSEVKEAFERAKSEAKAAFGSDEVYVEKLIENPKHIEVQILGDYEGNIVHLYERDCSVQRRH 240 (461)
T ss_dssp EEEESTTCSSSSEEEECCGGGHHHHHHHHHHHHHHHTSCCCEEEEECCCSCEEEEEEEEECTTCCEEEEEEEEEEEEETT
T ss_pred EEEeCCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEECCCCCeEEEEEEEEcCCCCEEEEEeccccccccc
Confidence 99999999999999999999999999999887777788889999999998899999999998899999999999999999
Q ss_pred eeEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHH
Q psy15251 242 QKIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLM 321 (720)
Q Consensus 242 ~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~ 321 (720)
++.++.+|++.++++..+++.+.+.++++++||.|.+++||+++ + |++||||+|||+|++++++++++|+|+++++++
T Consensus 241 ~~~~~~~P~~~l~~~~~~~i~~~a~~~~~~lg~~g~~~ve~~~~-~-~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~ 318 (461)
T 2dzd_A 241 QKVVEVAPSVSLSDELRQRICEAAVQLMRSVGYVNAGTVEFLVS-G-DEFYFIEVNPRIQVEHTITEMITGIDIVQSQIL 318 (461)
T ss_dssp EEEEEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEE-T-TEEEEEEEESSCCGGGHHHHHHHCCCHHHHHHH
T ss_pred cceEEECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEe-C-CCEEEEEEECCCCCceeeEEeecCCCHHHHHHH
Confidence 99999999988999999999999999999999999999999999 5 779999999999999999999999999999999
Q ss_pred HHcCCCCCC------CCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecc-cCCCeeCCCCCCce
Q psy15251 322 VASGQELPL------KQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGV-IEGDEVSVHYDPMI 394 (720)
Q Consensus 322 ~a~G~~l~~------~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v-~~G~~v~~~~d~~~ 394 (720)
+++|++++. .+..+..+|+++++|+++++|..+|.|..|.+..+..|. ++++|++..+ .+|++|+++||+++
T Consensus 319 ~~~G~~l~~~~~~~~~~~~~~~~g~~~~~ri~~~~~~~~~~p~~g~i~~~~~~~-~~~v~~~~~~~~~G~~i~~~~~~~~ 397 (461)
T 2dzd_A 319 IADGCSLHSHEVGIPKQEDIRINGYAIQSRVTTEDPLNNFMPDTGKIMAYRSGG-GFGVRLDAGNGFQGAVITPYYDSLL 397 (461)
T ss_dssp HHTTCCTTSTTTCCCCGGGCCCCSEEEEEEEESEEGGGTTEECCEECSEEECCC-CTTEEEEESSCSTTCEECSSSCCEE
T ss_pred HHcCCCccccccccccccccccceeEEEeeecccCCccCccCCCCeeeEEecCC-CCCeEeecccccCCCCcCcccchhh
Confidence 999998863 222356789999999999999888999999999898886 5789998764 79999999999999
Q ss_pred EEEEEEcCCHHHHHHHHHHHhhcceEeccccCHHHHHHhccCccccccccccccccccccccc
Q psy15251 395 SKLVVWDENRTLALNKMKQALSQYQIAGLDTNINFLINLCSNDHFIQGDIHTGFIDQHKDELL 457 (720)
Q Consensus 395 a~vi~~g~~~~ea~~~~~~al~~~~i~G~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~~~~~~ 457 (720)
|+|+++|+|+++|+++++++++.++++|++||++|+.+++.||+|++|+++|+||+++ .+++
T Consensus 398 ~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 459 (461)
T 2dzd_A 398 VKLSTWALTFEQAARKMLRNLREFRIRGIKTNIPFLENVVQHPKFLSGEYDTSFIDTT-PELF 459 (461)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTCEEESSCCSHHHHHHHHHSHHHHTSCCCTTHHHHC-GGGG
T ss_pred heeEEEcCCHHHHHHHHHHHHHhcEEeCCcCCHHHHHHHhCChhhhCCCccchhhhcc-hhhh
Confidence 9999999999999999999999999999999999999999999999999999999988 3443
No 10
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=100.00 E-value=2e-71 Score=623.53 Aligned_cols=447 Identities=48% Similarity=0.820 Sum_probs=418.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
||||||+|+|+++++++++|+++|+++++++++++..+.+.+++|+.+.++|.....+|.|.+.|++++++.++|+|+|+
T Consensus 1 ~k~ilI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~v~~~ 80 (451)
T 2vpq_A 1 MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYLNIPNILSIATSTGCDGVHPG 80 (451)
T ss_dssp -CEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHTTCSEEECC
T ss_pred CceEEEeCCCHHHHHHHHHHHHcCCEEEEEecccccccchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEEC
Confidence 58999999999999999999999999999999888888889999999998876677899999999999999999999999
Q ss_pred CCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecC
Q psy15251 88 YGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVR 167 (720)
Q Consensus 88 ~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~ 167 (720)
+|+++|++.++..+++.|++++||++++++.++||..+|++|+++|||+||++...+.+.+++.++++++|||+||||..
T Consensus 81 ~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~~ 160 (451)
T 2vpq_A 81 YGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATA 160 (451)
T ss_dssp SSTTTTCHHHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHHHCSSEEEEETT
T ss_pred CCccccCHHHHHHHHHcCCeEECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccCcCCHHHHHHHHHhcCCcEEEEECC
Confidence 99999999999999999999999999999999999999999999999999976112789999999999999999999999
Q ss_pred CCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeEEEE
Q psy15251 168 GGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKIIEE 247 (720)
Q Consensus 168 g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~e~ 247 (720)
|+||+||++|++.+|+.++++.+.+++...|++..+++|+||+|++|++++++.+.+|+++++++++|+.+++|++..+.
T Consensus 161 g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 240 (451)
T 2vpq_A 161 GGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVEE 240 (451)
T ss_dssp CCTTCSEEEESSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCCSEEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEE
T ss_pred CCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEecCCCeEEEEEEEEcCCCCEEEEeccccchhccccceEEE
Confidence 99999999999999999999998877766777889999999998789999999998899999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcCCC
Q psy15251 248 APAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASGQE 327 (720)
Q Consensus 248 ~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G~~ 327 (720)
+|++.++++..+++.+.+.++++++||.|++++||++++++|++||+|+|||+++++++++.++|+|++++++++++|.+
T Consensus 241 ~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~~ 320 (451)
T 2vpq_A 241 APSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLNDNKFYFMEMNTRIQVEHPVTEMVTGIDLVKLQLQVAMGDV 320 (451)
T ss_dssp ESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTCC
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCCCCEEEEEeeCCCCCceehhhHHhCCCHHHHHHHHHCCCC
Confidence 99977999999999999999999999999999999998456889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCHHHH
Q psy15251 328 LPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENRTLA 407 (720)
Q Consensus 328 l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~~ea 407 (720)
++..+.++..+++++++|+|+++|..+|.|..|.+..+..|. .++++++..+.+|+.++++|++++|+++++|+|+++|
T Consensus 321 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~-~~~v~~~~~~~~g~~~~~~~~~~~g~v~~~g~~~~ea 399 (451)
T 2vpq_A 321 LPYKQEDIKLTGHAIEFRINAENPYKNFMPSPGKIEQYLAPG-GYGVRIESACYTNYTIPPYYDSMVAKLIIHEPTRDEA 399 (451)
T ss_dssp CSCCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCSEEECCC-STTEEEECCCCTTCBCCTTTCCEEEEEEEEESSHHHH
T ss_pred CCCcccccCcCceEeeeEeeeeccccccCCCCCEEeEEECCC-CCCcccccccccCCccCcccccccEEEEEEeCCHHHH
Confidence 987666677889999999999999888999999999988875 5789999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceEeccccCHHHHHHhccCccccccccccccccccccc
Q psy15251 408 LNKMKQALSQYQIAGLDTNINFLINLCSNDHFIQGDIHTGFIDQHKDE 455 (720)
Q Consensus 408 ~~~~~~al~~~~i~G~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~~~~ 455 (720)
+++++++++.++++|+.||++||++++.||+|++|+++|+||++++..
T Consensus 400 ~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
T 2vpq_A 400 IMAGIRALSEFVVLGIDTTIPFHIKLLNNDIFRSGKFNTNFLEQNSIM 447 (451)
T ss_dssp HHHHHHHHHTCEEESSCCSHHHHHHHHTCHHHHHTCCCTTTTTTSCTT
T ss_pred HHHHHHHHhccEEeCcCCCHHHHHHHhCCHhhhcCCCccHHHhhhhhh
Confidence 999999999999999999999999999999999999999999988654
No 11
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=3e-71 Score=622.04 Aligned_cols=445 Identities=45% Similarity=0.794 Sum_probs=417.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
|||||||+|+|+++++++++|+++|+++++++++++..+.+.+++|+.+.++|. ...+|.|.+.|++++++.++|+|+|
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~-~~~~~~d~~~l~~~~~~~~~d~v~~ 79 (451)
T 1ulz_A 1 MVNKVLVANRGEIAVRIIRACKELGIPTVAIYNEVESTARHVKLADEAYMIGTD-PLDTYLNKQRIINLALEVGADAIHP 79 (451)
T ss_dssp CCSSEEECCCHHHHHHHHHHHHHHTCCEEEEECGGGTTCHHHHHSSEEEECCSS-TTHHHHCHHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCcHHHHHHHHHHHHcCCeEEEEechhhcccchhhhCcEEEEcCCC-cccccCCHHHHHHHHHHcCCCEEEE
Confidence 578999999999999999999999999999998888888889999999988655 6678999999999999999999999
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeec
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAV 166 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~ 166 (720)
++|+++|++.++..+++.|++++||++++++.++||..+|++|+++|||+|++....+++.+++.++++++|||+||||.
T Consensus 80 ~~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~ 159 (451)
T 1ulz_A 80 GYGFLAENAEFAKMCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSLEEAKALAREIGYPVLLKAT 159 (451)
T ss_dssp CSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSSCCCHHHHHHHHHHHCSSEEEEEC
T ss_pred CCCccccCHHHHHHHHHCCCeEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHcCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999998711278999999999999999999999
Q ss_pred CCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeEEE
Q psy15251 167 RGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKIIE 246 (720)
Q Consensus 167 ~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~e 246 (720)
.|+||+||++|++.+|+.++++.+..++...|++..+++|+||+|++|++++++.+.+|+++++++|+|+.+++|++..+
T Consensus 160 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~~ 239 (451)
T 1ulz_A 160 AGGGGRGIRICRNEEELVKNYEQASREAEKAFGRGDLLLEKFIENPKHIEYQVLGDKHGNVIHLGERDCSIQRRNQKLVE 239 (451)
T ss_dssp SSSSCCSCEEESSHHHHHHHHHHHHHHHHHTTSCCCEEEEECCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEE
T ss_pred CCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCeEEEEEEEEcCCCCEEEEeeeeccccccccccee
Confidence 99999999999999999999999988777788888999999999889999999999889999999999999999999999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcCC
Q psy15251 247 EAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASGQ 326 (720)
Q Consensus 247 ~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G~ 326 (720)
.+|++.++++..+++.+.+.++++++||+|++++||+++ ++|++||||+|||+++++++++.++|+|++++++++++|.
T Consensus 240 ~~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~-~~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~ 318 (451)
T 1ulz_A 240 IAPSLILTPEKREYYGNIVTKAAKEIGYYNAGTMEFIAD-QEGNLYFIEMNTRIQVEHPVSEMVTGIDIVKWQIKIAAGE 318 (451)
T ss_dssp EESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-TTCCEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTC
T ss_pred ECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEe-CCCCEEEEEeeCCCCccchHHHHHhCCCHHHHHHHHHcCC
Confidence 999877999999999999999999999999999999999 7788999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCHHH
Q psy15251 327 ELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENRTL 406 (720)
Q Consensus 327 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~~e 406 (720)
++++.+.++..+++++++|+|+++|..+|.|..|.+..+..|. .++++++..+.+|+.++++||+++|+++++|+|+++
T Consensus 319 ~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~-~~~v~~~~~~~~g~~~~~~~~~~~g~v~~~g~~~~e 397 (451)
T 1ulz_A 319 PLTIKQEDVKFNGYAIECRINAEDPKKNFAPSTRVIERYYVPG-GFGIRVEHAAARGFEVTPYYDSMIAKLITWAPTWDE 397 (451)
T ss_dssp CCCCCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCCSEECCC-STTEEEEECCCTTCBCCSSSCCEEEEEEEEESSHHH
T ss_pred CCCCccccCCCceEEEEEeccccCcccCcCCCCceeceEECCC-CCCcccccCccCCCEecccccchheEEEEECCCHHH
Confidence 9987665667788999999999999888999999999888886 578999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceEeccccCHHHHHHhccCcccccccccccccccccc
Q psy15251 407 ALNKMKQALSQYQIAGLDTNINFLINLCSNDHFIQGDIHTGFIDQHKD 454 (720)
Q Consensus 407 a~~~~~~al~~~~i~G~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~~~ 454 (720)
|+++++++++.++++|++||++||+++|.||+|++|+++|+||+++.+
T Consensus 398 a~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (451)
T 1ulz_A 398 AVERMRAALETYEITGVKTTIPLLINIMKEKDFKAGKFTTKYLEEHPE 445 (451)
T ss_dssp HHHHHHHHHHTCEECSSCCSHHHHHHHHHCHHHHHTCCCTTTTTTCGG
T ss_pred HHHHHHHHHhhcEEeCccCCHHHHHHHhCCHHHhcCCCcchhhhhhHh
Confidence 999999999999999999999999999999999999999999999854
No 12
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=100.00 E-value=1.4e-71 Score=638.61 Aligned_cols=443 Identities=36% Similarity=0.587 Sum_probs=404.9
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHc---------CCcEEEEeeC--CCCCCcccccccEEEEeCCCCCcccccCHHHHH
Q psy15251 5 SCVLDSILIANRGEIACRIMRTAKKM---------GIRVVSVYSD--IDADALHVKMADEAYRLEGKSSLDTYLNQAKIL 73 (720)
Q Consensus 5 ~~~~~~iLI~~~G~~a~~iira~~~~---------G~~~v~v~s~--~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~ 73 (720)
++|+|||||+|+|+++++++++|+++ |++++++++. .+..+.+.++||+.+.+|+....++|.|.+.|+
T Consensus 44 ~~~~kkILI~g~g~~a~~iira~~~~G~~vi~~d~gi~~v~v~s~~D~~~~~~~~~~aD~~~~ip~~~~~~~y~d~~~l~ 123 (554)
T 1w96_A 44 HTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIV 123 (554)
T ss_dssp CBCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHH
T ss_pred cccccEEEEECCCHHHHHHHHHHHHcCCcceecccCceEEEEecccccccCChhhhhCCEEEEcCCCCccccccCHHHHH
Confidence 35789999999999999999999999 5566788764 347788899999999998777778999999999
Q ss_pred HHHHHcCCCEEEeCCCCCcccHHHHHHHHHCC--CeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccC---------
Q psy15251 74 DIAVRSQCQAIHPGYGFLSENAEFANAVEGNR--LIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHG--------- 142 (720)
Q Consensus 74 ~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~g--l~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~--------- 142 (720)
++|++.++|+|+|++||++|++.++..|++.| ++++||++++++.++||..+|++|+++|||+|++...
T Consensus 124 ~~a~~~~id~Vi~g~G~~sE~~~~~~~l~~~g~~i~~~gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~ 203 (554)
T 1w96_A 124 DIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDE 203 (554)
T ss_dssp HHHHHTTCSEEECCSSTTTTCTHHHHHHHHSTTCCEESSCCHHHHHHSCSHHHHHHHHHHTTCCBCCBTTTTCCCCEECT
T ss_pred HHHHHhCCCEEEECCCccccCHHHHHHHHHcCCeEEEeCCCHHHHHHHhCHHHHHHHHHHCCCCcCCccccccccccccc
Confidence 99999999999999999999999999999999 9999999999999999999999999999999998652
Q ss_pred ---------------CCCCHHHHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEec
Q psy15251 143 ---------------EDQNEEILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEK 207 (720)
Q Consensus 143 ---------------~~~s~~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEe 207 (720)
.+.+.+++.++++++|||+||||..|+||+||++|++.+|+.++++.+.+++ .+..++||+
T Consensus 204 ~~~l~~ip~~~~~~~~~~~~~e~~~~~~~~g~PvVvKp~~g~gg~Gv~~v~~~~el~~a~~~~~~~~----~~~~vlvEe 279 (554)
T 1w96_A 204 KTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEI----PGSPIFIMK 279 (554)
T ss_dssp TTCCEECCHHHHGGGSCSSHHHHHHHHHHHCSSEEEEETTCCTTTTEEEECSHHHHHHHHHHHHHHS----TTCCEEEEE
T ss_pred cccccccccccccccCCCCHHHHHHHHHHcCCCEEEEECCCCCCceEEEECCHHHHHHHHHHHHhhc----cCCCEEEEE
Confidence 1378899999999999999999999999999999999999999999887653 257899999
Q ss_pred cccCCceEEEEEEEcccccEEEEEeeeccccccceeEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCC
Q psy15251 208 YIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPS 287 (720)
Q Consensus 208 yI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~ 287 (720)
||+|++|+++++++|++|+++++++++|+.++++++.++.+|++.++++..+++.+.+.++++++||+|++++||+++++
T Consensus 280 ~i~g~~e~sv~vl~d~~G~vv~l~~~~~~~~~~~~k~~~~~P~~~l~~~~~~~i~~~a~~~~~alg~~G~~~ve~~~~~~ 359 (554)
T 1w96_A 280 LAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHD 359 (554)
T ss_dssp CCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEECTT
T ss_pred ecCCCcEEEEEEEEcCCCCEEEEeeeeeeeEeeccceeeeCCCcCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECC
Confidence 99988999999999988999999999999999999999999997799999999999999999999999999999999745
Q ss_pred CCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcCCCCCCC-----------------------------CCCCCcC
Q psy15251 288 SGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASGQELPLK-----------------------------QEDLQLR 338 (720)
Q Consensus 288 ~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G~~l~~~-----------------------------~~~~~~~ 338 (720)
+|++||||||||+|++++++++++|+|++++++++++|.+++.. |..+...
T Consensus 360 dg~~~~iEiN~R~~g~~~~~~~~~G~dl~~~~~~~a~G~~l~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 439 (554)
T 1w96_A 360 DGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPIPK 439 (554)
T ss_dssp TCCEEEEEEECSCCTTTHHHHHHHCCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCTTCCSHHHHHHCCCCCCC
T ss_pred CCCEEEEEeeCCCCcceehhhhhcCCCHHHHHHHHHcCCCcccccchhhhccCCccccccccccccccccccccccCCCC
Confidence 67899999999999999999999999999999999999977521 1235678
Q ss_pred eeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCHHHHHHHHHHHhhcc
Q psy15251 339 GHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENRTLALNKMKQALSQY 418 (720)
Q Consensus 339 g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~ 418 (720)
||++++|+|+++|.++|.|.+|.|..+..|. .++++++.++.+|+.|+++||+++|+++++|+|+++|+++++++++++
T Consensus 440 g~~i~~r~~~~~~~~~~~p~~G~i~~~~~~~-~~~v~~~~~~~~g~~i~~~~~~~~~~vi~~g~~~~eA~~~~~~al~~i 518 (554)
T 1w96_A 440 GHCTACRITSEDPNDGFKPSGGTLHELNFRS-SSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKEL 518 (554)
T ss_dssp SEEEEEEEEEECCCCSSCCCSSSEEEECCSS-CSSEEEEEEECCSCSSCSSCSEEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEccCCCCCcccCCeEEeEEecCC-CCCEEEeeecccCCccCCCCCCceEEEEEEeCCHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999998876 578999999999999999999999999999999999999999999999
Q ss_pred eEec-cccCHHHHHHhccCcccccccccccccccc
Q psy15251 419 QIAG-LDTNINFLINLCSNDHFIQGDIHTGFIDQH 452 (720)
Q Consensus 419 ~i~G-~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~ 452 (720)
+|+| ++||++||+++|+||+|++|+++|+||++.
T Consensus 519 ~i~g~~~~~i~~~~~~~~~~~f~~~~~~t~~~~~~ 553 (554)
T 1w96_A 519 SIRGDFRTTVEYLIKLLETEDFEDNTITTGWLDDL 553 (554)
T ss_dssp TTCC----CCHHHHHHHTSHHHHTTCCCTTHHHHH
T ss_pred EEEeeccCCHHHHHHHhcCHhhhcCCccchHhhhh
Confidence 9999 999999999999999999999999999864
No 13
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=100.00 E-value=3.8e-70 Score=612.67 Aligned_cols=444 Identities=46% Similarity=0.797 Sum_probs=415.0
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
|||||||+|+|+++++++++|+++|+++++++++++..+.+.+++|+.+.++|.....+|.|.+.|++++++.++|+|+|
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~~~~~~~~d~~~l~~~~~~~~~d~v~~ 80 (449)
T 2w70_A 1 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHP 80 (449)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCCEEEC
T ss_pred CCceEEEeCCcHHHHHHHHHHHHcCCeEEEEeccccccCchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEE
Confidence 57899999999999999999999999999999888888888999999998866666779999999999999999999999
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHH-HHHHHHhCCcEEEee
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEIL-MEQAERIGYPLMIKA 165 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~-~~~~~~ig~PvvvKp 165 (720)
++|+++|++.++..+++.|++++||++++++.++||..+|++|+++|||+|++....+.+.+++ .++++++|||+||||
T Consensus 81 ~~g~~~e~~~~~~~~e~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~g~PvvvKp 160 (449)
T 2w70_A 81 GYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA 160 (449)
T ss_dssp CSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHHTCCBCSBCSSCCCSCHHHHHHHHHHHCSSEEEEE
T ss_pred CCCCcccCHHHHHHHHHcCCceECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccccCCHHHHHHHHHHHhCCcEEEEE
Confidence 9999999999999999999999999999999999999999999999999999871127888898 889999999999999
Q ss_pred cCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeEE
Q psy15251 166 VRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKII 245 (720)
Q Consensus 166 ~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~ 245 (720)
..|+||+|+++|++.+|+.++++.+..++...|++..+++|+||+|++|++++++.+.+|++++++.|+|+.+++|++..
T Consensus 161 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 240 (449)
T 2w70_A 161 SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVV 240 (449)
T ss_dssp TTCCTTTTCEEECSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEE
T ss_pred CCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEeccCCCeEEEEEEEEcCCCCEEEEeceecccccCCccee
Confidence 99999999999999999999999988776677878899999999988999999999988999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcC
Q psy15251 246 EEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASG 325 (720)
Q Consensus 246 e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G 325 (720)
+.+|++.++++..+++.+.+.++++++||+|++++||+++ + |++||||+|||+++++++++.++|+|+++++++.++|
T Consensus 241 ~~~p~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~-~-~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G 318 (449)
T 2w70_A 241 EEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFE-N-GEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAG 318 (449)
T ss_dssp EEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEE-T-TEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHHT
T ss_pred eeCCcccCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEE-C-CCEEEEEEECCCCccchHHHHHhCCCHHHHHHHHHCC
Confidence 9999877999999999999999999999999999999999 5 7799999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCHH
Q psy15251 326 QELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENRT 405 (720)
Q Consensus 326 ~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~~ 405 (720)
.++++.+.++...++++++++|+++| .+|.|..|.+..+..|. .++++++..+.+|+.+++++++++|+++++|+|++
T Consensus 319 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~~~~~-~~~v~~~~~~~~g~~~~~~~~~~~~~v~~~g~~~~ 396 (449)
T 2w70_A 319 QPLSIKQEEVHVRGHAVECRINAEDP-NTFLPSPGKITRFHAPG-GFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRD 396 (449)
T ss_dssp CCCSSCGGGCCCCSEEEEEEEECBCT-TTCCBCCEECCEEECCC-STTEEEECCCCTTCEECSSSCSEEEEEEEEESSHH
T ss_pred CCCCCchhccccceeEEEEeecccCc-cccCCCCCEeceEECCC-CCcEEEEeccccCCEeccccCcceEEEEEEcCCHH
Confidence 99886665667789999999999999 88999999999888876 47899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcceEeccccCHHHHHHhccCcccccccccccccccccc
Q psy15251 406 LALNKMKQALSQYQIAGLDTNINFLINLCSNDHFIQGDIHTGFIDQHKD 454 (720)
Q Consensus 406 ea~~~~~~al~~~~i~G~~tn~~~l~~~~~~~~f~~~~~~t~~~~~~~~ 454 (720)
+|+++++++++.+++.|++||++||+++++||+|++|+++|+||++++.
T Consensus 397 ~a~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (449)
T 2w70_A 397 VAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLG 445 (449)
T ss_dssp HHHHHHHHHHHHCEEESSCCSHHHHHHHHTCHHHHHCCCCTTHHHHHHT
T ss_pred HHHHHHHHHHhhcEEeCcCCCHHHHHHHHcChhhccCCceehhhhhhhh
Confidence 9999999999999999999999999999999999999999999998754
No 14
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=100.00 E-value=6.4e-52 Score=458.23 Aligned_cols=386 Identities=16% Similarity=0.203 Sum_probs=322.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
+++||||+|+|+++++++++|+++|+++++++ .++.++.+.+++|+.+.+ ++.|.+.|++++++.++|+|+|
T Consensus 6 ~~~~ilI~g~g~~~~~~~~a~~~~G~~~v~v~-~~~~~~~~~~~ad~~~~~-------~~~d~~~l~~~~~~~~~d~v~~ 77 (403)
T 4dim_A 6 DNKRLLILGAGRGQLGLYKAAKELGIHTIAGT-MPNAHKPCLNLADEISYM-------DISNPDEVEQKVKDLNLDGAAT 77 (403)
T ss_dssp CCCEEEEECCCGGGHHHHHHHHHHTCEEEEEE-CSSCCHHHHHHCSEEEEC-------CTTCHHHHHHHTTTSCCSEEEC
T ss_pred CCCEEEEECCcHhHHHHHHHHHHCCCEEEEEc-CCCCCCcchhhCCeEEEe-------cCCCHHHHHHHHHHcCCCEEEe
Confidence 46799999999999999999999999999994 355566788899999886 4678999999999999999999
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeec
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAV 166 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~ 166 (720)
+ ++.++...+++++++.|++ ||++++++.++||..+|++|+++|||+|++.. +.+.+++.++++++|||+|+||.
T Consensus 78 ~-~~~~~~~~~a~~~~~~gl~--g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~--~~~~~~~~~~~~~~g~P~vvKp~ 152 (403)
T 4dim_A 78 C-CLDTGIVSLARICDKENLV--GLNEEAAIMCGDKYKMKEAFKKYNVNTARHFV--VRNENELKNALENLKLPVIVKAT 152 (403)
T ss_dssp C-SCSTTHHHHHHHHHHHTCS--SCCHHHHHHHHCHHHHHHHHHHHTCCCCCEEC--CCSHHHHHHHHHTSCSSEEEECS
T ss_pred C-CcchhHHHHHHHHHHcCcC--CCCHHHHHHHhCHHHHHHHHHHcCCCCCCEEE--eCCHHHHHHHHhcCCCCEEEEEC
Confidence 7 5666777889999999985 99999999999999999999999999999987 89999999999999999999999
Q ss_pred CCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeecc-cc-ccceeE
Q psy15251 167 RGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCS-VQ-RRHQKI 244 (720)
Q Consensus 167 ~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s-~~-r~~~k~ 244 (720)
.|+||+|+++|++.+|+.++++.+...+ .++.+++|+||+| .|+++.++.. +|++..+...+.. .. .+....
T Consensus 153 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~----~~~~~lvEe~i~g-~e~sv~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 226 (403)
T 4dim_A 153 DLQGSKGIYIAKKEEEAIDGFNETMNLT----KRDYCIVEEFIEG-YEFGAQAFVY-KNDVLFVMPHGDETYMSHTAVPV 226 (403)
T ss_dssp CC-----CEEESSHHHHHHHHHHHHHHC----SSSCCEEEECCCS-EEEEEEEEEE-TTEEEEEEEEEEEEEESSSEEEE
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHhcC----cCCcEEEEEccCC-cEEEEEEEEE-CCEEEEEEEecceeccCCCCcce
Confidence 9999999999999999999999887652 2578999999995 8999999974 3666654322111 11 111223
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcc-eeEEEEEEeCCCCcEEEEEecCCCCccc--ccccccccCcHHHHHHH
Q psy15251 245 IEEAPAPGISSEFRSRLGSTGVQVARAVRYHN-AGTVEFIMDPSSGEFYFMEMNTRLQVEH--PVSEMITGVDLVQWQLM 321 (720)
Q Consensus 245 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G-~~~vEf~~~~~~g~~~~iEiNpR~~~~~--~~~e~~tGvdl~~~~l~ 321 (720)
....|+ .++++..+++.+.+.++++++||.| ++|+||+++ +|++||+|||||+++++ .+++.++|+|+++++++
T Consensus 227 ~~~~p~-~l~~~~~~~l~~~a~~~~~~lg~~gg~~~ve~~~~--~~~~~~iEiN~R~~~~~~~~~~~~~~G~d~~~~~~~ 303 (403)
T 4dim_A 227 GHYVPL-DVKDDIIEKTKTEVKKAIKALGLNNCAVNVDMILK--DNEVYIIELTGRVGANCLPELVEINYGIEYYKMIAS 303 (403)
T ss_dssp EEEESC-CSCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEE--TTEEEEEEEESSCCSTTHHHHHHHHHTSCHHHHHHH
T ss_pred eEEeCC-CCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEEEE--CCcEEEEEEcCCCCCCcHHHHHHHHhCcCHHHHHHH
Confidence 445677 4999999999999999999999987 999999999 57799999999999875 47888999999999999
Q ss_pred HHcCCCC-CCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCC-CCc-EEEeecccCCCeeCCCCCC--ceEE
Q psy15251 322 VASGQEL-PLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEH-SDT-IRIETGVIEGDEVSVHYDP--MISK 396 (720)
Q Consensus 322 ~a~G~~l-~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~-~~~-vr~d~~v~~G~~v~~~~d~--~~a~ 396 (720)
+++|+++ ++.+......++ +++|++. |.|.+|.|..+..|.. .++ ..++..+.+|+.|+++||+ ++|+
T Consensus 304 ~~~G~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~G~i~~~~~~~~~~~~v~~~~~~~~~G~~v~~~~d~~~~~g~ 376 (403)
T 4dim_A 304 MAISENPLVFWSQKSKENKA-GLARMII------ETEKSGILKEILNSNAKDDDIVEITFFKEENDEIKKFENSNDCIGQ 376 (403)
T ss_dssp HHTTCCTHHHHTTCCSSCCE-EEEEEEC------CSSCCEEEEEEEECCCCCTTEEEEEECCCTTCEECCSCSGGGCCEE
T ss_pred HHcCCCcccccccccccccc-ceEEEEE------ecCCCeEEEeeecccccCCCeEEEEEEcCCCCEeCCCCCCCceeEE
Confidence 9999988 554444344444 5688864 5678899999887752 123 2356889999999999999 8999
Q ss_pred EEEEcCCHHHHHHHHHHHhhcceEe
Q psy15251 397 LVVWDENRTLALNKMKQALSQYQIA 421 (720)
Q Consensus 397 vi~~g~~~~ea~~~~~~al~~~~i~ 421 (720)
++++|+|+++|++++.+++++++|+
T Consensus 377 vi~~~~~~~~a~~~~~~~~~~~~i~ 401 (403)
T 4dim_A 377 IIVKEETLDKCKDKLDVIINNINII 401 (403)
T ss_dssp EEEEESSHHHHHHHHHHHHTTEEEE
T ss_pred EEEEeCCHHHHHHHHHHHhccEEEE
Confidence 9999999999999999999999875
No 15
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=9.6e-48 Score=469.99 Aligned_cols=396 Identities=19% Similarity=0.297 Sum_probs=335.9
Q ss_pred CCCCEEEEEcCcHH-----------HHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHH
Q psy15251 6 CVLDSILIANRGEI-----------ACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILD 74 (720)
Q Consensus 6 ~~~~~iLI~~~G~~-----------a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~ 74 (720)
.+++||||+|+|++ +..++++|+++|+++++++++++....+..++|+.+. .| .+.+.|.+
T Consensus 5 ~~~~kIlIig~G~i~ig~a~E~d~sg~~~~~al~~~G~~vv~v~~~~~~~~~~~~~ad~~~i-~p-------~~~e~i~~ 76 (1073)
T 1a9x_A 5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYI-EP-------IHWEVVRK 76 (1073)
T ss_dssp SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEEC-SC-------CCHHHHHH
T ss_pred CCCCEEEEECCCcccccccccccchHHHHHHHHHHcCCEEEEEeCCcccccCChhhCcEEEE-CC-------CCHHHHHH
Confidence 45899999999986 6789999999999999999888877788899999874 32 57899999
Q ss_pred HHHHcCCCEEEeCCCCC-cccH--HHHH--HHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHH
Q psy15251 75 IAVRSQCQAIHPGYGFL-SENA--EFAN--AVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEI 149 (720)
Q Consensus 75 ~a~~~~~daI~pg~g~l-sE~~--~~a~--~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e 149 (720)
++++.++|+|+|++|+- .++. .+++ .|++.|++++||++++++.+.||..+|++|+++|||+|++.. +.+.++
T Consensus 77 i~~~~~~D~V~p~~g~~~~l~~~~~l~~~~~le~~gv~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~~~--v~~~~e 154 (1073)
T 1a9x_A 77 IIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGI--AHTMEE 154 (1073)
T ss_dssp HHHHHCCSEEECSSSHHHHHHHHHHHHHTTHHHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSEEE--ESSHHH
T ss_pred HHHHhCCCEEEeccCCchHHHHHHHHHHhhHHHHcCCeeeCCCHHHHHHhhCHHHHHHHHHHCCcCCCCEEE--ECCHHH
Confidence 99999999999999851 1122 2333 678899999999999999999999999999999999999987 889999
Q ss_pred HHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEE
Q psy15251 150 LMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVY 229 (720)
Q Consensus 150 ~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~ 229 (720)
+.++++++|||+||||..|+||+|++++++.+|+.++++.+...+ +.+.++||+||+|.+|++++++.|.+|+++.
T Consensus 155 a~~~~~~ig~PvVvKp~~~~Gg~Gv~iv~~~eel~~~~~~~~~~~----~~~~vlvEe~I~G~~E~~v~v~~d~~g~~v~ 230 (1073)
T 1a9x_A 155 ALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLS----PTKELLIDESLIGWKEYEMEVVRDKNDNCII 230 (1073)
T ss_dssp HHHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHHC----TTSCEEEEECCTTSEEEEEEEEECTTCCEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCCCceEEeCCHHHHHHHHHHHHhhC----CCCcEEEEEccCCCeEEEEEEEEeCCCCEEE
Confidence 999999999999999999999999999999999999998876542 3578999999998899999999999899887
Q ss_pred EEeeecccccc------ceeEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCc-ceeEEEEEEeCCCCcEEEEEecCCCCc
Q psy15251 230 LYERDCSVQRR------HQKIIEEAPAPGISSEFRSRLGSTGVQVARAVRYH-NAGTVEFIMDPSSGEFYFMEMNTRLQV 302 (720)
Q Consensus 230 ~~~r~~s~~r~------~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~-G~~~vEf~~~~~~g~~~~iEiNpR~~~ 302 (720)
+ |++++. .++.++.+|++.++++..++|.+.+.++++++||+ |.+++||++++++|++||||||||+++
T Consensus 231 ~----~~~e~~dp~~v~~g~s~~~~Pa~~l~~~~~~~l~~~a~~i~~~lg~~~G~~~vdf~~~~~~g~~~viEiNpR~~~ 306 (1073)
T 1a9x_A 231 V----CSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSR 306 (1073)
T ss_dssp E----EEEEESSCTTSCGGGSCEEESCCSCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEECTTTCCEEEEEEESSCCH
T ss_pred E----EEEecccCCccccCcEEEEecCCCCCHHHHHHHHHHHHHHHHHcCcccCceEEEEEEECCCCCEEEEEecCCCCc
Confidence 7 444442 24567778987899999999999999999999997 999999999943788999999999999
Q ss_pred ccccccccccCcHHHHHHHHHcCCCCCCCCCCCCcCeeEEEEEEeec-CCCCCCCCCCcceeeeeCCCCCCcEEEeeccc
Q psy15251 303 EHPVSEMITGVDLVQWQLMVASGQELPLKQEDLQLRGHSFETRIYAE-NPYEGFLPGAGNLTHLRPPEHSDTIRIETGVI 381 (720)
Q Consensus 303 ~~~~~e~~tGvdl~~~~l~~a~G~~l~~~~~~~~~~g~ai~~ri~ae-~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~ 381 (720)
++++++++||+|+++.++++++|.+++..+.. ++.+ +|. .|.|+.+.+. +..|. +.++....
T Consensus 307 ss~l~~~atG~~l~~~~~~~a~G~~l~~~~~~-----------i~~~~~~a-~f~p~~~~v~-~~ip~----~~~~~~~~ 369 (1073)
T 1a9x_A 307 SSALASKATGFPIAKVAAKLAVGYTLDELMND-----------ITGGRTPA-SFEPSIDYVV-TKIPR----FNFEKFAG 369 (1073)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHTTCCGGGSBCT-----------TTTTCSBS-CSCCBCSSEE-EEEEE----CCGGGCTT
T ss_pred cHHHHHHHhCCCHHHHHHHHHcCCChHHhhcc-----------ccCccCHH-HcccCCCcEE-EEccc----ccccccCC
Confidence 99999999999999999999999988754332 2333 454 5889888773 34443 23333344
Q ss_pred CCCeeCCCCCCceEEEEEEcCCHHHHHHHHHHHhhcceEeccccC--------HHHHHHhccCcc
Q psy15251 382 EGDEVSVHYDPMISKLVVWDENRTLALNKMKQALSQYQIAGLDTN--------INFLINLCSNDH 438 (720)
Q Consensus 382 ~G~~v~~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G~~tn--------~~~l~~~~~~~~ 438 (720)
.+.++...+++ +|+++++|+|++||++++.++|+ +.+.|+.+| .+.+.+.|.+|.
T Consensus 370 ~~~~~~~~~~~-~G~v~~~g~~~~ea~~ka~~~l~-~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 432 (1073)
T 1a9x_A 370 ANDRLTTQMKS-VGEVMAIGRTQQESLQKALRGLE-VGATGFDPKVSLDDPEALTKIRRELKDAG 432 (1073)
T ss_dssp SCCBCCSSCCC-CEEEEEEESSHHHHHHHHHHHSS-SSCSSSCCSSCTTCTTHHHHHHHHHHTCB
T ss_pred CCcccCCCccC-cEEEEEEcCCHHHHHHHHHHhhc-ccccCcCccccccccccHHHHHHHHhCCC
Confidence 56777777776 79999999999999999999997 889998754 678888888887
No 16
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=100.00 E-value=1.4e-47 Score=417.61 Aligned_cols=355 Identities=17% Similarity=0.175 Sum_probs=279.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
||||+|+|+|..+..++++||++|+++++++++++ +++.++||+.++++ .+.+.+.++.++ .++|+|+|+
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~--~~~~~~aD~~~~~~------~~~d~~~~~~~~--~~~D~v~~~ 70 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ--ALIRNYADEFYCFD------VIKEPEKLLELS--KRVDAVLPV 70 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT--CTTTTTSSEEEECC------TTTCHHHHHHHH--TSSSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC--ChhHhhCCEEEECC------CCcCHHHHHHHh--cCCCEEEEC
Confidence 79999999999999999999999999999965554 55577899999875 345667776655 479999999
Q ss_pred CCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecC
Q psy15251 88 YGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVR 167 (720)
Q Consensus 88 ~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~ 167 (720)
+++..++..++.++++.+++ +||++++++.++||..+|++|+++|||+|++.. +|||+||||..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~-~g~~~~a~~~~~dK~~~k~~l~~~gip~~~~~~---------------ig~P~vvKp~~ 134 (363)
T 4ffl_A 71 NENLACIEFLNSIKEKFSCP-VLFDFEAYRISRDKKKSKDYFKSIGVPTPQDRP---------------SKPPYFVKPPC 134 (363)
T ss_dssp CCCHHHHHHHHHHGGGCSSC-BCCCHHHHHHHTSHHHHHHHHHHTTCCCCCBSC---------------SSSCEEEECSS
T ss_pred CCChhHHHHHHHHHHHCCCc-cCCCHHHHHHhhCHHHHHHHHHhcCCCCCCcee---------------cCCCEEEEECC
Confidence 99877666677778888876 689999999999999999999999999998653 58999999999
Q ss_pred CCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeEEEE
Q psy15251 168 GGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKIIEE 247 (720)
Q Consensus 168 g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~e~ 247 (720)
|+||+|++++++.+++.. ....+++|+||+ ++|+++++++|+++..++...++|..++.+++.+..
T Consensus 135 g~g~~gv~~v~~~~~~~~-------------~~~~~~~ee~i~-g~e~sv~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p 200 (363)
T 4ffl_A 135 ESSSVGARIIYDDKDLEG-------------LEPDTLVEEYVE-GEVVSLEVVGDGSHFAVVKETLVHIDETYDCHMVTP 200 (363)
T ss_dssp CCTTTTCEEEC------C-------------CCTTCEEEECCC-SEEEEEEEEEESSCEEECCCEEEEECTTSCEEEEEE
T ss_pred CCCCcCeEEeccHHHhhh-------------hccchhhhhhcc-CcEEEEEEEEECCeEEEEEEEEeccCCcccceeecc
Confidence 999999999999888642 257899999999 589999999998877777777778777777776665
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccc-cccccccCcHHHHHHHHHcCC
Q psy15251 248 APAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHP-VSEMITGVDLVQWQLMVASGQ 326 (720)
Q Consensus 248 ~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~-~~e~~tGvdl~~~~l~~a~G~ 326 (720)
+|. . +++.+.+.++++++||+|++++||+++ ++ .+||+|||||+++.++ +++.+||+|++++++++++|.
T Consensus 201 ~~~---~----~~~~~~a~~~~~~l~~~G~~~vef~~~-~~-~~~viEiN~R~~g~~~~~~~~~~g~dl~~~~~~~~~g~ 271 (363)
T 4ffl_A 201 LPA---N----PLFRQISHDLAANLPLKGIMDVEAIFG-PK-GLRVIEIDARFPSQTPTVVYYSSGINLIELLFRAFTDG 271 (363)
T ss_dssp CCC---C----HHHHHHHHHHHHTTTCEEEEEEEEEEE-TT-EEEEEEEECSCCSSHHHHHHHHHCCCHHHHHHHHTTTC
T ss_pred hhH---H----HHHHHHHHHHHHhCCccceeeeeeEEe-CC-eEEEEEEeCCCCCChHHHHHHHHCcCHHHHHHHHHCCC
Confidence 553 2 568889999999999999999999999 54 5999999999998776 899999999999999999999
Q ss_pred CCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCC-CeeCCCCCCceEEEEEEcCCHH
Q psy15251 327 ELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEG-DEVSVHYDPMISKLVVWDENRT 405 (720)
Q Consensus 327 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G-~~v~~~~d~~~a~vi~~g~~~~ 405 (720)
+++.. .....++++.+++++++. ..+.|..+.+.. .+ +.+.... ..++ +...+.+|+++|++|++|+|++
T Consensus 272 ~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~---~~~~~~~-~~~~~~~~~~~~~~~v~~vi~~G~~~~ 342 (363)
T 4ffl_A 272 VEEIR--AIPENKYCIYEHLMFGEN-GVLIPVGEQVLS--MG---SDYGKFY-EEPGIEIFLCKGEYPVFTMVFWGKDRE 342 (363)
T ss_dssp CCCC------CCCEEEEEEEEECGG-GBEEECCHHHHT--TC---SEEEEEE-EETTEEEEEEESSSCEEEEEEEESSHH
T ss_pred CCCcc--ccCCCceEEEEEEecCCC-CccCCCCceEEe--cC---CCeeEEE-ecCCCCCEecCCCCceEEEEEEECCHH
Confidence 88754 345566777777776543 223444433321 11 1222211 1111 1224578999999999999999
Q ss_pred HHHHHHHHHhhcceE
Q psy15251 406 LALNKMKQALSQYQI 420 (720)
Q Consensus 406 ea~~~~~~al~~~~i 420 (720)
||++|++++|+.++.
T Consensus 343 eA~~k~~~al~~i~~ 357 (363)
T 4ffl_A 343 ETGAKRCKGLSVLKE 357 (363)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 17
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=100.00 E-value=6.4e-46 Score=408.49 Aligned_cols=380 Identities=16% Similarity=0.185 Sum_probs=304.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
+++||||+|+|..++.++++++++|+++++++++++. ....++|+.+.+ ++.|.+.+++++++.++|+|+|
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~~--~~~~~~d~~~~~-------~~~d~~~l~~~~~~~~~d~v~~ 80 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADA--PAMHVAHRSHVI-------NMLDGDALRRVVELEKPHYIVP 80 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTC--GGGGGSSEEEEC-------CTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCC--chhhhccceEEC-------CCCCHHHHHHHHHHcCCCEEEE
Confidence 4679999999999999999999999999999776654 456789998875 4678899999999999999999
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHH-HHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEee
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIM-IKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKA 165 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l-~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp 165 (720)
++++.. ..++..+++.|+ ++||++++++.++||..+|++| +++|||+|++.. +.+.+++.++++++|||+|+||
T Consensus 81 ~~e~~~--~~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~~~~l~~~~gip~p~~~~--~~~~~~~~~~~~~~g~P~vvKp 155 (391)
T 1kjq_A 81 EIEAIA--TDMLIQLEEEGL-NVVPCARATKLTMNREGIRRLAAEELQLPTSTYRF--ADSESLFREAVADIGYPCIVKP 155 (391)
T ss_dssp CSSCSC--HHHHHHHHHTTC-EESSCHHHHHHHHSHHHHHHHHHTTSCCCBCCEEE--ESSHHHHHHHHHHHCSSEEEEE
T ss_pred CCCcCC--HHHHHHHHhCCC-CcCCCHHHHHHhhCHHHHHHHHHHhCCCCCCCeee--eCCHHHHHHHHHhcCCCEEEEe
Confidence 998776 446778899999 5799999999999999999999 899999999987 8899999999999999999999
Q ss_pred cCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeEE
Q psy15251 166 VRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKII 245 (720)
Q Consensus 166 ~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~ 245 (720)
..|+||+|+++|++.+|+.++++.+...+.. ++..+++|+||++++|+++.++.+.+| +.++..--.....+....
T Consensus 156 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g~E~sv~~~~~~~g--~~~~~~~~~~~~~~~~~~ 231 (391)
T 1kjq_A 156 VMSSSGKGQTFIRSAEQLAQAWKYAQQGGRA--GAGRVIVEGVVKFDFEITLLTVSAVDG--VHFCAPVGHRQEDGDYRE 231 (391)
T ss_dssp SCC---CCCEEECSGGGHHHHHHHHHHHSGG--GCCCEEEEECCCCSEEEEEEEEEETTE--EEECCCEEEEEETTEEEE
T ss_pred CCCCCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEEecCCCeEEEEEEEEeCCC--eEEccCcceEEECCEEEE
Confidence 9999999999999999999999988764321 257899999999779999999998665 222210000011111122
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcC
Q psy15251 246 EEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASG 325 (720)
Q Consensus 246 e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G 325 (720)
...|++ ++++..+++.+.+.++++++||+|.+++||+++ ++ ++||+|+|||++++..++...+|+|++++++++++|
T Consensus 232 ~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~-~~-~~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~G 308 (391)
T 1kjq_A 232 SWQPQQ-MSPLALERAQEIARKVVLALGGYGLFGVELFVC-GD-EVIFSEVSPRPHDTGMVTLISQDLSEFALHVRAFLG 308 (391)
T ss_dssp EEECCC-CCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEEE-TT-EEEEEEEESSCCGGGGGHHHHBSSCHHHHHHHHHTT
T ss_pred EEeCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEe-CC-cEEEEEEECCCCCCcceeeeecCcCHHHHHHHHHcC
Confidence 345874 899999999999999999999999999999999 55 799999999999875555556699999999999999
Q ss_pred CCCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCC-cceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCH
Q psy15251 326 QELPLKQEDLQLRGHSFETRIYAENPYEGFLPGA-GNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENR 404 (720)
Q Consensus 326 ~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~-g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~ 404 (720)
.+++. +..+++++.+++++++|. ..|.. |....+. |. ..++++ |. ..+.++.++|+++++|+|+
T Consensus 309 ~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-pg--~~v~~~-----~~-~~~~~~~~lg~v~~~g~~~ 373 (391)
T 1kjq_A 309 LPVGG----IRQYGPAASAVILPQLTS--QNVTFDNVQNAVG-AD--LQIRLF-----GK-PEIDGSRRLGVALATAESV 373 (391)
T ss_dssp CCCCC----CCBCSSEEEEEECCEEEE--SSCEEECGGGSCB-TT--EEEEEC-----CC-CCEEEECCCEEEEEECSSH
T ss_pred CCCCC----ccccCcEEEEEEEccCcc--cccccccHHHHhC-CC--CEEEEe-----cc-CCCCCCCeEEEEEEecCCH
Confidence 98762 346778889999998763 23332 2222233 42 233442 11 2256788899999999999
Q ss_pred HHHHHHHHHHhhcceEec
Q psy15251 405 TLALNKMKQALSQYQIAG 422 (720)
Q Consensus 405 ~ea~~~~~~al~~~~i~G 422 (720)
++|+++++++++.++++|
T Consensus 374 ~~a~~~~~~~~~~i~~~~ 391 (391)
T 1kjq_A 374 VDAIERAKHAAGQVKVQG 391 (391)
T ss_dssp HHHHHHHHHHHHHCEEEC
T ss_pred HHHHHHHHHHHhhheecC
Confidence 999999999999998864
No 18
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=100.00 E-value=7.1e-47 Score=420.84 Aligned_cols=390 Identities=15% Similarity=0.165 Sum_probs=313.0
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccC----HHHHHHHHHHcCCC
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLN----QAKILDIAVRSQCQ 82 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~----~~~i~~~a~~~~~d 82 (720)
..|+|+|+|+|.....++++|+++|+++++++++++..+.+...+|+.+.++ .+.| .+.+.+++++.++|
T Consensus 4 ~~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~~~~~~~~~~~d~~~~~~------~~~d~~~~~~~~~~~~~~~~id 77 (425)
T 3vot_A 4 RNKNLAIICQNKHLPFIFEEAERLGLKVTFFYNSAEDFPGNLPAVERCVPLP------LFEDEEAAMDVVRQTFVEFPFD 77 (425)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHTTCEEEEEEETTSCCCCSCTTEEEEEEEC------TTTCHHHHHHHHHHHHHHSCCS
T ss_pred CCcEEEEECCChhHHHHHHHHHHCCCEEEEEECCCcccccCHhhccEEEecC------CCCCHHHHHHHHHHhhhhcCCC
Confidence 5689999999999999999999999999999999998888888999999875 3344 34566677888999
Q ss_pred EEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEE
Q psy15251 83 AIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLM 162 (720)
Q Consensus 83 aI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~Pvv 162 (720)
+|+|++++.. ...+.+++.+|++ ||++++++.++||..+|++|+++|||+|++.. +++.+++.+ .++|||+|
T Consensus 78 ~V~~~~e~~~--~~~a~l~e~lglp--g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~--~~~~~~~~~--~~~g~P~v 149 (425)
T 3vot_A 78 GVMTLFEPAL--PFTAKAAEALNLP--GLPFTTMENCRNKNKTRSILQQNGLNTPVFHE--FHTLADLEN--RKLSYPLV 149 (425)
T ss_dssp EEECCCGGGH--HHHHHHHHHTTCS--SCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEE--ESSGGGGTT--CCCCSSEE
T ss_pred EEEECCchhH--HHHHHHHHHcCCC--CCCHHHHHHhhCHHHHHHHHHHCCCCCCceec--cCcHHHHHH--hhcCCcEE
Confidence 9998776433 4557788899988 99999999999999999999999999999887 788887753 57899999
Q ss_pred EeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHh-----cCCCCcEEEeccccCCceEEEEEEEcccccE--EEEEeeec
Q psy15251 163 IKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQS-----AFNDSKVLLEKYIQSPRHIEVQIIGDRYGNY--VYLYERDC 235 (720)
Q Consensus 163 vKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~-----~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~--v~~~~r~~ 235 (720)
|||..|+||+||++|++.+|+.++++.+...... ..++..+++|+||+| +|++++++.++ |+. +.+..+.+
T Consensus 150 vKp~~g~gs~Gv~~v~~~~el~~a~~~~~~~~~~~~~~~~~~~~~~lvEe~i~G-~e~sv~~~~~~-g~~~~~~~~~~~~ 227 (425)
T 3vot_A 150 VKPVNGFSSQGVVRVDDRKELEEAVRKVEAVNQRDLNRFVHGKTGIVAEQFIDG-PEFAIETLSIQ-GNVHVLSIGYKGN 227 (425)
T ss_dssp EEESCC-----CEEECSHHHHHHHHHHHHHHTTSSHHHHHTTCCCEEEEECCCS-CEEEEEEEEET-TEEEEEEEEEEEC
T ss_pred EEECCCCCCCCceEechHHHHHHHHHHHHhhhhhhhhhhccCCCcEEEEEEecC-cEEEEEEEEeC-CcEEEEeEEEEec
Confidence 9999999999999999999999999988754321 234678999999995 89999999764 443 44566777
Q ss_pred cccccceeEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCC-cceeEEEEEEeCCCCcEEEEEecCCCCcc---cccccccc
Q psy15251 236 SVQRRHQKIIEEAPAPGISSEFRSRLGSTGVQVARAVRY-HNAGTVEFIMDPSSGEFYFMEMNTRLQVE---HPVSEMIT 311 (720)
Q Consensus 236 s~~r~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~-~G~~~vEf~~~~~~g~~~~iEiNpR~~~~---~~~~e~~t 311 (720)
+....+.+.....|+ .++++..+++.+.+.++++++|+ +|++|+||+++ ++|++||+|+|||+++. +.++++++
T Consensus 228 ~~~~~~~~~~~~~Pa-~l~~~~~~~i~~~~~~~~~alg~~~G~~~ve~~~~-~dG~~~~iEiN~R~gG~~~~~~l~~~~~ 305 (425)
T 3vot_A 228 SKGPFFEEGVYIAPA-QLKEETRLAIVKEVTGAVSALGIHQGPAHTELRLD-KDGTPYVIEVGARIGGSGVSHYIVKEST 305 (425)
T ss_dssp CCCSBCCCCEEEESC-CCCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEEC-TTCCEEEEEEESSCGGGGHHHHHHHHHH
T ss_pred cCCCccccceEeecc-cCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEEE-eCCcEEEEEEecCCCCCCchHHHHHHHH
Confidence 777777777788898 59999999999999999999999 69999999999 78999999999999754 56889999
Q ss_pred cCcHHHHHHHHHcCCCCCCCC-CCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCC---CCCcE-EEeecccCCCee
Q psy15251 312 GVDLVQWQLMVASGQELPLKQ-EDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPE---HSDTI-RIETGVIEGDEV 386 (720)
Q Consensus 312 Gvdl~~~~l~~a~G~~l~~~~-~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~---~~~~v-r~d~~v~~G~~v 386 (720)
|+|+++++++.++|....... .......++....+.+ +..|.+..+.... ..|+| +++..+++|+.|
T Consensus 306 G~d~~~~~i~~alg~~~~~~~~~~~~~~~~~~~~~~~~--------~~~G~~~~i~g~~~~~~~p~v~~~~~~~~~G~~v 377 (425)
T 3vot_A 306 GINFMQLVLQNALKPLESSEFEGEIRPVRTAGNYIIPV--------QGSGTFEKIDGLEEVKQRQEVKRVFQFMRRGAKI 377 (425)
T ss_dssp CCCHHHHHHHHHHSCCCGGGSCSCCCCSSEEEEEECCC--------CSCEEEEEEETHHHHHTCTTEEEEEECCCTTCEE
T ss_pred CCCHHHHHHHHHCCCccccccccccccceEEEEEEEcC--------CCCeEEEecCCHHHHhcCCCeEEEEEEecCCCEe
Confidence 999999999999997543221 1223334444333322 3456666553210 12454 788888999999
Q ss_pred CCC--CCCceEEEEEEcCCHHHHHHHHHHHhhcceEec
Q psy15251 387 SVH--YDPMISKLVVWDENRTLALNKMKQALSQYQIAG 422 (720)
Q Consensus 387 ~~~--~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G 422 (720)
.++ +++++|+++++|+|+++|.++++++++.++|..
T Consensus 378 ~~~~~~~~~~g~v~~~g~~~~ea~~~~~~~~~~i~i~~ 415 (425)
T 3vot_A 378 LPYPHFSGYPGFILTSHHSYEECEAFYRELDDELHIIY 415 (425)
T ss_dssp CCTTCCCCCSEEEEEEESSHHHHHHHHHHHHHHCEEEE
T ss_pred CCCCCCCCeEEEEEEEECCHHHHHHHHHHHhCccEEEE
Confidence 764 567899999999999999999999999999863
No 19
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=100.00 E-value=5.9e-46 Score=414.43 Aligned_cols=390 Identities=18% Similarity=0.219 Sum_probs=303.7
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
+++||||+|+|..++.++++++++|+++++++++++. ....++|+.+.+ ++.|.+.+++++++.++|+|+|
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~~--~~~~~ad~~~~~-------~~~d~~~l~~~~~~~~~d~V~~ 88 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYANA--PAMQVAHRSYVG-------NMMDKDFLWSVVEREKPDAIIP 88 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTTC--HHHHHSSEEEES-------CTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC--hhhhhcceEEEC-------CCCCHHHHHHHHHHcCCCEEEE
Confidence 4679999999999999999999999999999877654 456789998875 4678999999999999999999
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHH-HHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEee
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIM-IKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKA 165 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l-~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp 165 (720)
++++.. ..++..+++.|+ ++||++++++.++||..+|++| +++|||+|++.. +.+.+++.++++++|||+|+||
T Consensus 89 ~~e~~~--~~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~k~~l~~~~gip~p~~~~--~~~~~~~~~~~~~~g~P~vvKp 163 (433)
T 2dwc_A 89 EIEAIN--LDALFEFEKDGY-FVVPNARATWIAMHRERLRETLVKEAKVPTSRYMY--ATTLDELYEACEKIGYPCHTKA 163 (433)
T ss_dssp CSSCSC--HHHHHHHHHTTC-CBSSCHHHHHHHHCHHHHHHHHHHTSCCCCCCEEE--ESSHHHHHHHHHHHCSSEEEEE
T ss_pred CcccCC--HHHHHHHHhcCC-eeCCCHHHHHHhhCHHHHHHHHHHhcCCCCCCeeE--eCCHHHHHHHHHhcCCCEEEEE
Confidence 998766 466788999999 6799999999999999999999 899999999987 8899999999999999999999
Q ss_pred cCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcc--cccEEE-EEeeeccccccce
Q psy15251 166 VRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDR--YGNYVY-LYERDCSVQRRHQ 242 (720)
Q Consensus 166 ~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~--~G~~v~-~~~r~~s~~r~~~ 242 (720)
..|+||+|+++|++.+|+.++++.+...+.. ++..+++|+||++++|+++.++.+. +|+.+. +...--.....+.
T Consensus 164 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g~E~sv~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 241 (433)
T 2dwc_A 164 IMSSSGKGSYFVKGPEDIPKAWEEAKTKARG--SAEKIIVEEHIDFDVEVTELAVRHFDENGEIVTTFPKPVGHYQIDGD 241 (433)
T ss_dssp CCC------EEECSGGGHHHHHHC-----------CCEEEEECCCCSEEEEECCEEEECTTSCEEEEEECCEEEEESSSS
T ss_pred CCCcCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEccCCCCeeEEEEEEecccCCCCEeEEEecccceEEEcCE
Confidence 9999999999999999999999877654221 2578999999997799999999875 677532 2210000111122
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCccc--ccccccccCcHHHHHH
Q psy15251 243 KIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEH--PVSEMITGVDLVQWQL 320 (720)
Q Consensus 243 k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~--~~~e~~tGvdl~~~~l 320 (720)
......|++ ++++..+++.+.+.++++++||+|++++||+++ ++ ++||+|+|||++++. ++...++|+|++++++
T Consensus 242 ~~~~~~p~~-l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~-~~-~~~viEiN~R~~~~~~~~~~~~~~g~~~~~~~~ 318 (433)
T 2dwc_A 242 YHASWQPAE-ISEKAEREVYRIAKRITDVLGGLGIFGVEMFVK-GD-KVWANEVSPRPHDTGMVTLASHPPGFSEFALHL 318 (433)
T ss_dssp EEEEEESCC-CCHHHHHHHHHHHHHHHHHHCSSEECEEEEEEE-TT-EEEEEEEESSCCGGGGGHHHHSCTTCSHHHHHH
T ss_pred EEEEEcCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEe-CC-cEEEEEEeCCcCCCcceehhHhccCCCHHHHHH
Confidence 223345875 899999999999999999999999999999999 55 799999999999773 3445678999999999
Q ss_pred HHHcCCCCCC----CCCCCCcCeeEEEEEEeecCCCCCCCCCCcceee-eeCCCCCCcEEEeecccCCCeeCCCCCCceE
Q psy15251 321 MVASGQELPL----KQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTH-LRPPEHSDTIRIETGVIEGDEVSVHYDPMIS 395 (720)
Q Consensus 321 ~~a~G~~l~~----~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~-~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a 395 (720)
+.++|.+++. .+.++..+++++++++++++|. ..|....+.. +..|. ..++++ |. ....++..+|
T Consensus 319 ~~~~G~~l~~~~~~~~~~~~~~~~a~~~~v~~~~~~--~~~~i~g~~~~~~~pg--~~v~~~-----~~-~~~~~~~~lg 388 (433)
T 2dwc_A 319 RAVLGLPIPGEWVDGYRLFPMLIPAATHVIKAKVSG--YSPRFRGLVKALSVPN--ATVRLF-----GK-PEAYVGRRLG 388 (433)
T ss_dssp HHHHTCCCCCEEETTEEEECCSSCEEEEEEECSSCE--ESCEEECHHHHTTSTT--EEEEEC-----CC-SEECTTCEEE
T ss_pred HHHcCCCCCcccccccccccccccEEEEEEEcCCCC--cCcCcchHHHHhhCCC--cEEEEe-----cC-CCCCCCCeEE
Confidence 9999998863 1123566788999999998863 3333322222 23332 123332 22 1235778899
Q ss_pred EEEEEcCCHHHHHHHHHHHhhcceEecccc
Q psy15251 396 KLVVWDENRTLALNKMKQALSQYQIAGLDT 425 (720)
Q Consensus 396 ~vi~~g~~~~ea~~~~~~al~~~~i~G~~t 425 (720)
+++++|+|+++|+++++++++.++++|...
T Consensus 389 ~v~~~g~~~~ea~~~~~~~~~~i~~~~~~~ 418 (433)
T 2dwc_A 389 IALAWDKDVEVAKRKAEMVAHMIELRTRSS 418 (433)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEECTTS
T ss_pred EEEEEeCCHHHHHHHHHHHHhheEEEeecc
Confidence 999999999999999999999999999653
No 20
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=100.00 E-value=1.9e-45 Score=407.32 Aligned_cols=367 Identities=17% Similarity=0.184 Sum_probs=298.4
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
+.+||||+|+|++++.++++++++|++++++ +++..++...++|+.+.. +|.|.+.|.++++ ++|+|++
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~--d~~~~~p~~~~ad~~~~~-------~~~d~~~l~~~a~--~~D~V~~ 102 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVL--DPDPASPAGAVADRHLRA-------AYDDEAALAELAG--LCEAVST 102 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEE--CSCTTCHHHHHSSEEECC-------CTTCHHHHHHHHH--HCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEE--CCCCcCchhhhCCEEEEC-------CcCCHHHHHHHHh--cCCEEEE
Confidence 5689999999999999999999999999888 455566778889998753 7889999999994 6899996
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHH----hCCcEE
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAER----IGYPLM 162 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~----ig~Pvv 162 (720)
+++ ..+..++..+++. .++||++++++.++||..+|++|+++|||+|++.. +++.+++.+++++ + ||+|
T Consensus 103 ~~e--~~~~~~~~~l~~~--~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~--v~~~~e~~~~~~~~~~~~-~P~V 175 (419)
T 4e4t_A 103 EFE--NVPAASLDFLART--TFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPHVV--IESAAALAALDDAALDAV-LPGI 175 (419)
T ss_dssp CCT--TCCHHHHHHHHTT--SEESSCHHHHHHHTCHHHHHHHHHHTTCCBCCEEE--ECSHHHHHTSCHHHHHTT-CSEE
T ss_pred ccC--cCCHHHHHHHHcc--CCcCCCHHHHHHhcCHHHHHHHHHHcCcCCCCeEE--ECCHHHHHHHHHhhcccc-CCEE
Confidence 654 3457788888887 47899999999999999999999999999999987 8899999988888 9 9999
Q ss_pred Eeec-CCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccc
Q psy15251 163 IKAV-RGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRH 241 (720)
Q Consensus 163 vKp~-~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~ 241 (720)
+||. .|++|+|++++++.+|+.++++.+ ++.++++|+||++++|+++.++.|.+|+++.+.. .++.+
T Consensus 176 vKp~~~g~~G~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~Eisv~v~~~~~G~~~~~~~----~e~~~ 243 (419)
T 4e4t_A 176 LKTARLGYDGKGQVRVSTAREARDAHAAL--------GGVPCVLEKRLPLKYEVSALIARGADGRSAAFPL----AQNVH 243 (419)
T ss_dssp EEESSSCCTTTTEEEECSHHHHHHHHHHT--------TTCCEEEEECCCEEEEEEEEEEECTTSCEEECCC----EEEEE
T ss_pred EEecCCCCCCCceEEECCHHHHHHHHHhc--------CCCcEEEeecCCCCeEEEEEEEEcCCCCEEEEeC----eEEEe
Confidence 9999 888999999999999999988653 4689999999998899999999998888776532 22222
Q ss_pred e-eEE--EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHH
Q psy15251 242 Q-KII--EEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQW 318 (720)
Q Consensus 242 ~-k~~--e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~ 318 (720)
. .+. ..+|++.++++..+++.+.+.++++++||+|++++||+++ ++|++||+|||||+++++.++..++|+|++++
T Consensus 244 ~~g~~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~lg~~G~~~vE~~~~-~dG~~~v~EiNpR~~~sg~~t~~~~~~s~~~~ 322 (419)
T 4e4t_A 244 HNGILALTIVPAPAADTARVEEAQQAAVRIADTLGYVGVLCVEFFVL-EDGSFVANEMAPRPHNSGHYTVDACATSQFEQ 322 (419)
T ss_dssp ETTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEE-TTCCEEEEEEESSCCGGGTTHHHHBSSCHHHH
T ss_pred eCCeEEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEe-CCCCEEEEEEeCCCCCCCCeEeeccCCCHHHH
Confidence 2 233 3678866999999999999999999999999999999999 78899999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCcCeeEEEEEEeecCCCC-C--CCCCCccee-eeeCCCCCCcEEEeec----ccCCCeeCCCC
Q psy15251 319 QLMVASGQELPLKQEDLQLRGHSFETRIYAENPYE-G--FLPGAGNLT-HLRPPEHSDTIRIETG----VIEGDEVSVHY 390 (720)
Q Consensus 319 ~l~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~-~--f~p~~g~i~-~~~~p~~~~~vr~d~~----v~~G~~v~~~~ 390 (720)
+++.++|.+++.. .....++...++.+.-.. . -.+....+. .+..| ++.+... .++|.++
T Consensus 323 ~~ra~~G~pl~~~----~~~~~~~m~n~lg~~~~~~~~~~~~~~~~~~~~l~~p----~~~~~~ygk~~~~~~rkm---- 390 (419)
T 4e4t_A 323 QVRAMTRMPLGNP----RQHSPAAMLNILGDVWFPNGAAAGAVTPPWDTVAAMP----AAHLHLYGKEEARVGRKM---- 390 (419)
T ss_dssp HHHHHTTCCCCCC----CBCSCEEEEEEEGGGGCTTCGGGCCCCCCHHHHHTST----TEEEEECCCSCCCTTCEE----
T ss_pred HHHHHcCCCCCCc----cccCCeEEEEEecCccccccccccccchHHHHHHhCC----CCEEEECCCCCCCCCCce----
Confidence 9999999998743 334447778887652100 0 001111111 12233 3433322 2345555
Q ss_pred CCceEEEEEEcCCHHHHHHHHHHHhhcceE
Q psy15251 391 DPMISKLVVWDENRTLALNKMKQALSQYQI 420 (720)
Q Consensus 391 d~~~a~vi~~g~~~~ea~~~~~~al~~~~i 420 (720)
|++.+.|+|.++|+++++++.+.++|
T Consensus 391 ----Ghv~~~~~~~~~~~~~a~~~~~~l~~ 416 (419)
T 4e4t_A 391 ----GHVNFTAEMRDDAVAAATACAQLLRV 416 (419)
T ss_dssp ----EEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred ----EEEEEEeCCHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999987754
No 21
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=100.00 E-value=1.5e-44 Score=398.60 Aligned_cols=364 Identities=16% Similarity=0.208 Sum_probs=299.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCccccccc--EEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMAD--EAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD--~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
++||||+|+|..++.++++++++|+++++++ +++. +..+++| ..+. .+|.|.+.|.+++++ +|+|.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~--p~~~~ad~~~~~~-------~~~~d~~~l~~~a~~--~d~i~ 91 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNS--PAKQISAHDGHVT-------GSFKEREAVRQLAKT--CDVVT 91 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTC--TTGGGCCSSCCEE-------SCTTCHHHHHHHHTT--CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCC--cHHHhccccceee-------cCCCCHHHHHHHHHh--CCEEE
Confidence 6799999999999999999999999999997 5444 4456687 4433 378999999999976 68888
Q ss_pred eCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCC--CHHHHHHHHHHhCCcEEE
Q psy15251 86 PGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQ--NEEILMEQAERIGYPLMI 163 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~--s~~e~~~~~~~ig~Pvvv 163 (720)
+.++.. ...+...+++ |++ +||++++++.+.||..+|++|+++|||+|++.. +. +.+++.++++++|||+|+
T Consensus 92 ~e~e~~--~~~~l~~l~~-g~~-v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~--~~~~~~~~~~~~~~~~g~P~Vv 165 (403)
T 3k5i_A 92 AEIEHV--DTYALEEVAS-EVK-IEPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRE--LVENTPAELAKVGEQLGYPLML 165 (403)
T ss_dssp ESSSCS--CHHHHHHHTT-TSE-ESSCHHHHHHHTSHHHHHHHHHTTTCCBCCEEE--ESSCCHHHHHHHHHHHCSSEEE
T ss_pred ECCCCC--CHHHHHHHHc-CCc-cCcCHHHHHHhcCHHHHHHHHHHCCcCCCCEEE--EcCCCHHHHHHHHHHhCCCEEE
Confidence 876654 3677888888 998 899999999999999999999999999999987 66 999999999999999999
Q ss_pred eecCCC-CCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccce
Q psy15251 164 KAVRGG-GGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQ 242 (720)
Q Consensus 164 Kp~~g~-Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~ 242 (720)
||..|+ +|+|++++++.+|+.++++.+ ++.++++|+||++++|+++.++.+.+| +.++...+..++.+.
T Consensus 166 Kp~~gg~~g~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~E~sv~v~~~~~g--~~~~p~~~~~~~~g~ 235 (403)
T 3k5i_A 166 KSKTMAYDGRGNFRVNSQDDIPEALEAL--------KDRPLYAEKWAYFKMELAVIVVKTKDE--VLSYPTVETVQEDSI 235 (403)
T ss_dssp EESSSCCTTTTEEEECSTTSHHHHHHHT--------TTSCEEEEECCCEEEEEEEEEEECSSC--EEECCCEEEEEETTE
T ss_pred EeCCCCcCCCCEEEECCHHHHHHHHHhc--------CCCcEEEecCCCCCeEEEEEEEEcCCC--EEEeCCeeeEEeCCE
Confidence 999998 999999999999999988753 367999999999789999999999877 566666677777777
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcc-cccccccccCcHHHHHHH
Q psy15251 243 KIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE-HPVSEMITGVDLVQWQLM 321 (720)
Q Consensus 243 k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~-~~~~e~~tGvdl~~~~l~ 321 (720)
......|++.++++..+++.+.+.+++++|||+|.+++||+++ ++|++||+|+|||++++ |..+ ..+|+|+++++++
T Consensus 236 ~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~Lg~~G~~~ve~~~~-~dg~~~v~EiNpR~~~sg~~~~-~~~~~s~~~~~~r 313 (403)
T 3k5i_A 236 CKLVYAPARNVSDAINQKAQELARKAVAAFDGKGVFGVEMFLL-EDDSIMLCEIASRIHNSGHYTI-EGCALSQFDAHLR 313 (403)
T ss_dssp EEEEEESCSSCCHHHHHHHHHHHHHHHHTSCCSEEEEEEEEEE-TTSCEEEEEEESSCCGGGTTHH-HHBSSCHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEe-CCCcEEEEEeecCCCCCCceee-eecCCCHHHHHHH
Confidence 7778889866999999999999999999999999999999999 78899999999999986 5555 4569999999999
Q ss_pred HHcCCCCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCccee-eeeCCCCCCcEEEee----cccCCCeeCCCCCCceEE
Q psy15251 322 VASGQELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLT-HLRPPEHSDTIRIET----GVIEGDEVSVHYDPMISK 396 (720)
Q Consensus 322 ~a~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~-~~~~p~~~~~vr~d~----~v~~G~~v~~~~d~~~a~ 396 (720)
.++|.|++.. .....+.+++..++.++... +....+. .+..| ++.+.. ..++|.++ |+
T Consensus 314 a~~G~pl~~~--~~~~~~~a~m~nilg~~~~~---~~~~~~~~~~~~p----~~~~~~ygk~~~~~~rkm--------Gh 376 (403)
T 3k5i_A 314 AILDLPIPAQ--SLEIRQPSIMLNIIGGAAPD---THLQAAECALSIP----NASIHLYSKGAAKPGRKM--------GH 376 (403)
T ss_dssp HHTTCCCCGG--GGSBSSCEEEEEEECCSSSS---HHHHHHHHHTTST----TEEEEECCCCSCCTTCEE--------EE
T ss_pred HHcCCCCCcc--cccCCCcEEEEEEecCCccc---cchhHHHHHhcCC----CCEEEECCCCCCCCCCee--------EE
Confidence 9999988743 23445568888888765321 0000111 12233 333322 13455555 99
Q ss_pred EEEEcCCHHHHHHHHHHHhhcc
Q psy15251 397 LVVWDENRTLALNKMKQALSQY 418 (720)
Q Consensus 397 vi~~g~~~~ea~~~~~~al~~~ 418 (720)
+.+.|+|.++|+++++++++.+
T Consensus 377 v~~~~~~~~~~~~~a~~~~~~~ 398 (403)
T 3k5i_A 377 ITVTAPTMHEAETHIQPLIDVV 398 (403)
T ss_dssp EEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHhhh
Confidence 9999999999999999998764
No 22
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=3.2e-44 Score=392.03 Aligned_cols=360 Identities=18% Similarity=0.237 Sum_probs=294.2
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCCC
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGYG 89 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~g 89 (720)
||||+|+|.+++.++++++++|+++++++++++. +...++|+ +.. ++.|.+.+++++ .++|+|+|+++
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~G~~v~~~~~~~~~--~~~~~a~~-~~~-------~~~d~~~l~~~~--~~~d~v~~~~e 68 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPLGLSFRFLDPSPEA--CAGQVGEL-VVG-------EFLDEGALLRFA--EGLALVTYEFE 68 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTBTCCEEEEESCTTC--GGGGTSEE-EEC-------CTTCHHHHHHHH--TTCSEEEECCT
T ss_pred CEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC--hHHHhhce-Eec-------CCCCHHHHHHHH--hCCCEEEECCC
Confidence 6899999999999999999999999999765443 44567888 542 678999999999 68999999998
Q ss_pred CCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecCCC
Q psy15251 90 FLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVRGG 169 (720)
Q Consensus 90 ~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~g~ 169 (720)
+.. ..+++.+++.| ++||+++++..++||..+|++|+++|||+|++.. +++.+++.++++++|||+|+||..|+
T Consensus 69 ~~~--~~~~~~l~~~g--~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~--~~~~~~~~~~~~~~g~P~vvKp~~~~ 142 (369)
T 3aw8_A 69 NVP--VEAARRLEGRL--PLYPPAKALEVAQDRLREKTFFQGLGVPTPPFHP--VDGPEDLEEGLKRVGLPALLKTRRGG 142 (369)
T ss_dssp TCC--HHHHHHHHHHS--CBSSCHHHHHHHTCHHHHHHHHHHHTCCCCCEEE--ESSHHHHHHHHTTTCSSEEEEECCC-
T ss_pred CcC--HHHHHHHHHcC--CcCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcee--eCCHHHHHHHHHHcCCCEEEEEcCCC
Confidence 753 67778888889 6799999999999999999999999999999987 88999999999999999999999999
Q ss_pred -CCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeEEEEc
Q psy15251 170 -GGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKIIEEA 248 (720)
Q Consensus 170 -Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~e~~ 248 (720)
||+|++++++.+|+.++++.+ ++..+++|+||++++|++++++.|++|+++.+ ...+..++.+.......
T Consensus 143 ~~g~Gv~~v~~~~el~~~~~~~--------~~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~-~~~~~~~~~~~~~~~~~ 213 (369)
T 3aw8_A 143 YDGKGQALVRTEEEALEALKAL--------GGRGLILEGFVPFDREVSLLAVRGRTGEVAFY-PLVENRHWGGILRLSLA 213 (369)
T ss_dssp -----EEEECSHHHHHHHHTTT--------CSSSEEEEECCCCSEEEEEEEEECTTSCEEEC-CCEEEEEETTEEEEEEE
T ss_pred CCcceEEEECCHHHHHHHHHhc--------CCCcEEEEEcCCCCEEEEEEEEECCCCCEEEE-CCeeeeeeCCEEEEEEC
Confidence 999999999999999887653 36789999999977999999999988887654 33344555555566778
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcCCCC
Q psy15251 249 PAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASGQEL 328 (720)
Q Consensus 249 Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G~~l 328 (720)
|++.++++..+++.+.+.++++++||+|.+++||+++ + |++||+|+|||+++++..+.+.+|+|+++.+++.++|.++
T Consensus 214 p~~~l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~-~-~~~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~g~~l 291 (369)
T 3aw8_A 214 PAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQV-G-EELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPL 291 (369)
T ss_dssp SCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEE-T-TEEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHTCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEE-C-CcEEEEEEeCCcCCccceeeeeecCCHHHHHHHHHcCCCC
Confidence 9866999999999999999999999999999999999 5 7899999999999887777788999999999999999988
Q ss_pred CCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCHHHHH
Q psy15251 329 PLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENRTLAL 408 (720)
Q Consensus 329 ~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~~ea~ 408 (720)
+.. ...++++.+++++++|. ...+ ... |++.+. +. |..++ -...+|+++++|+|+++|+
T Consensus 292 ~~~----~~~~~~~~~~~~~~~~~------~~~~--~~~----p~~~~~--~~-g~~~~--~~~~lg~v~~~g~~~~ea~ 350 (369)
T 3aw8_A 292 GST----APRGQSAMVNLIGEKPP------FAEV--LKV----EGAHLH--WY-GKAVR--PGRKVGHITLRRDGLKALE 350 (369)
T ss_dssp CCC----CBCSEEEEEEEESCCCC------HHHH--HTS----TTEEEE--EC-CCCCC--TTCEEEEEEEEESSHHHHH
T ss_pred CCc----cccccEEEEEEeCCCch------HHHh--ccC----CCcEEE--Ee-cCCCC--CCCeEEEEEEEcCCHHHHH
Confidence 743 33467889999988621 0011 112 233221 11 33222 2366799999999999999
Q ss_pred HHHHHHhhcce
Q psy15251 409 NKMKQALSQYQ 419 (720)
Q Consensus 409 ~~~~~al~~~~ 419 (720)
++++++++.++
T Consensus 351 ~~~~~~~~~i~ 361 (369)
T 3aw8_A 351 EGLARLSRLVS 361 (369)
T ss_dssp HHHHHHHTTSS
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 23
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=100.00 E-value=1.5e-42 Score=380.24 Aligned_cols=368 Identities=16% Similarity=0.195 Sum_probs=289.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
||||||+|+|..+..++++++++|+++++++++++.. ...++|..+.+ ++.|.+.+.+++ .++|+|+|+
T Consensus 1 M~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~~~~--~~~~~~~~~~~-------~~~d~~~l~~~~--~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPRSP--AGQVADEQIVA-------GFFDSERIEDLV--KGSDVTTYD 69 (380)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCT--TGGGSSEEEEC-------CTTCHHHHHHHH--HTCSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCc--hhhhCceEEEC-------CCCCHHHHHHHH--hcCCEEEec
Confidence 4799999999999999999999999999997665544 35678887764 467889999998 579999999
Q ss_pred CCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecC
Q psy15251 88 YGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVR 167 (720)
Q Consensus 88 ~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~ 167 (720)
++... ..+++.+++.|++ ++|+++++..++||..+|++|+++|||+|++.. +++.++ +++++|||+|+||..
T Consensus 70 ~e~~~--~~~~~~l~~~gi~-~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~--~~~~~~---~~~~~~~P~vvKp~~ 141 (380)
T 3ax6_A 70 LEHID--VQTLKKLYNEGYK-IHPSPYTLEIIQDKFVQKEFLKKNGIPVPEYKL--VKDLES---DVREFGFPVVQKARK 141 (380)
T ss_dssp CSCSC--HHHHHHHHHTTCE-ESSCHHHHHHHHSHHHHHHHHHHTTCCCCCEEE--CSSHHH---HHHTTCSSEEEEESC
T ss_pred ccCCC--HHHHHHHHHCCCe-ECCCHHHHHHhcCHHHHHHHHHHcCCCCCCeEE--eCCHHH---HHHhcCCCEEEEecC
Confidence 87654 6677888999998 679999999999999999999999999999987 788777 667899999999999
Q ss_pred CC-CCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccc--cccceeE
Q psy15251 168 GG-GGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSV--QRRHQKI 244 (720)
Q Consensus 168 g~-Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~--~r~~~k~ 244 (720)
|+ ||+|++++++.+|+.++++ ..+++|+||++++|+++.++.+++|++..+... +.. ++.+...
T Consensus 142 ~~y~g~Gv~~v~~~~el~~~~~------------~~~lvEe~i~~g~e~sv~~~~~~~G~~~~~~~~-~~~~~~~~~~~~ 208 (380)
T 3ax6_A 142 GGYDGRGVFIIKNEKDLENAIK------------GETYLEEFVEIEKELAVMVARNEKGEIACYPVV-EMYFDEDANICD 208 (380)
T ss_dssp CC-----EEEECSGGGGGGCCC------------SSEEEEECCCEEEEEEEEEEECSSCCEEEEEEE-EEC--------C
T ss_pred CCCCCCCeEEECCHHHHHHHhc------------CCEEEEeccCCCeeEEEEEEECCCCCEEEECCe-eeeecccCCeeE
Confidence 99 9999999999999865542 689999999966999999999877887654321 122 3333223
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHc
Q psy15251 245 IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVAS 324 (720)
Q Consensus 245 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~ 324 (720)
....|++ ++++..+++.+.+.++++++||+|.+++||+++ ++|++||+|+|||+++++..+...+|+|+++++++.++
T Consensus 209 ~~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~-~~g~~~viEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (380)
T 3ax6_A 209 TVIAPAR-IEEKYSKIAREIATSVVEALEGVGIFGIEMFLT-KQGEILVNEIAPRPHNSGHYTIEACVTSQFEQHIRAIM 286 (380)
T ss_dssp EEEESCS-SCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEE-TTSCEEEEEEESSCCGGGTHHHHHBSSCHHHHHHHHHT
T ss_pred EEECCCC-CCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEEe-CCCcEEEEEecCCCCCCceeehhhccccHHHHHHHHHh
Confidence 3467885 899999999999999999999999999999999 78899999999999988777778899999999999999
Q ss_pred CCCCCCCCCCCCcCeeEEEEEEeecCCCCCCCC-CCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCC
Q psy15251 325 GQELPLKQEDLQLRGHSFETRIYAENPYEGFLP-GAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDEN 403 (720)
Q Consensus 325 G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p-~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~ 403 (720)
|.+++... ..+.+..+++++.+...+..+ ..| +..+.. |++++.. .|..+. .....+|++++.|+|
T Consensus 287 g~~l~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~----p~~~~~~---~g~~~~-~~~~~lg~v~~~g~~ 353 (380)
T 3ax6_A 287 NLPLGSTE----LLIPAVMVNLLGEEGYYGKPALIGL-EEALAI----EGLSLHF---YGKKET-RPYRKMGHFTVVDRD 353 (380)
T ss_dssp TCCCCCCC----BCSCEEEEEEEBCTTCCBSEEEESH-HHHHTS----TTEEEEE---CCCSCB-CBTCEEEEEEEECSS
T ss_pred CCCCCCcc----ccCceEEEEEecccccccccccchh-HHHhcC----CCCEEEe---cCCCCC-CCCCeeEEEEEEeCC
Confidence 99887532 223366788888754211211 122 333322 3455532 233322 233567999999999
Q ss_pred HHHHHHHHHHHhhcceEec
Q psy15251 404 RTLALNKMKQALSQYQIAG 422 (720)
Q Consensus 404 ~~ea~~~~~~al~~~~i~G 422 (720)
+++|.++++++++.++++-
T Consensus 354 ~~~a~~~~~~~~~~i~~~~ 372 (380)
T 3ax6_A 354 VERALEKALRAKKILKVVS 372 (380)
T ss_dssp HHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHhhhhhhc
Confidence 9999999999999998864
No 24
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3.5e-43 Score=394.46 Aligned_cols=377 Identities=17% Similarity=0.187 Sum_probs=315.9
Q ss_pred CcEEEEeeCCCCCCc--ccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCCCCCccc--HHHHHHHHHCCCe
Q psy15251 32 IRVVSVYSDIDADAL--HVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGYGFLSEN--AEFANAVEGNRLI 107 (720)
Q Consensus 32 ~~~v~v~s~~d~~~~--~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~g~lsE~--~~~a~~~~~~gl~ 107 (720)
+.+|+++++.|.... +.+.||+.|.+++.+...++.+++.|++++++.++|+|+|+ +|+ ..+++.+++.|++
T Consensus 52 ~~~Vav~~~~D~~~~~p~~~~Ad~~~~~~~~~~~~~~~~i~~I~~~a~~~~id~Vip~----sE~~l~~~a~~~e~~Gi~ 127 (474)
T 3vmm_A 52 KYSVAVIKDKDYFKSLADFEHPDSIYWAHEDHNKPEEEVVEQIVKVAEMFGADAITTN----NELFIAPMAKACERLGLR 127 (474)
T ss_dssp HHEEEEEECGGGCSSGGGGCCCSCCSSCCSCCCCCHHHHHHHHHHHHHHTTCSEEEES----CGGGHHHHHHHHHHTTCC
T ss_pred ceEEEEEeCCCcccCCcchhhcCeEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEC----CcccHHHHHHHHHHcCCC
Confidence 467888888776544 48899999988776666667888999999999999999993 466 7899999999998
Q ss_pred EeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHH
Q psy15251 108 FVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQL 187 (720)
Q Consensus 108 ~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~ 187 (720)
||++++++.++||..+|++|+++|||+|++.. +.+.+++.++++++|||+||||..|+||+|++++++.+|+.+++
T Consensus 128 --g~~~~ai~~~~DK~~~k~~l~~~GIpvp~~~~--v~s~ee~~~~~~~lg~PvVVKP~~g~gg~Gv~iv~~~eel~~a~ 203 (474)
T 3vmm_A 128 --GAGVQAAENARDKNKMRDAFNKAGVKSIKNKR--VTTLEDFRAALEEIGTPLILKPTYLASSIGVTLITDTETAEDEF 203 (474)
T ss_dssp --CSCHHHHHHTTCHHHHHHHHHHTTSCCCCEEE--ECSHHHHHHHHHHSCSSEEEEESSCCTTTTCEEECCTTSHHHHH
T ss_pred --CCCHHHHHHhhCHHHHHHHHHHcCCCCCCeEE--ECCHHHHHHHHHHcCCCEEEEECCCCcCceEEEECCHHHHHHHH
Confidence 99999999999999999999999999999987 88999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-------cCCCCcEEEeccccCCce-----------EEEE-EEEcccccEEEEEeeeccccccceeEEEEc
Q psy15251 188 RSAQRESQS-------AFNDSKVLLEKYIQSPRH-----------IEVQ-IIGDRYGNYVYLYERDCSVQRRHQKIIEEA 248 (720)
Q Consensus 188 ~~~~~~~~~-------~f~~~~~lvEeyI~g~~~-----------~~v~-v~~d~~G~~v~~~~r~~s~~r~~~k~~e~~ 248 (720)
+.+.+++.. .| ++.++||+||+|.+| +++. ++.|+++..+.+.+++|+.+ +++..+.+
T Consensus 204 ~~~~~~~~~~~~~~a~~~-~~~vlVEe~I~G~e~~~~q~~~~~~e~sv~~v~~dg~~~~v~i~~~~~~~~--~~~~~~~~ 280 (474)
T 3vmm_A 204 NRVNDYLKSINVPKAVTF-EAPFIAEEFLQGEYGDWYQTEGYSDYISIEGIMADGEYFPIAIHDKTPQIG--FTETSHIT 280 (474)
T ss_dssp HHHHHHHTTSCCCTTCCC-SCSEEEEECCCBCHHHHCSSSSSCSEEEEEEEEETTEEEEEEEEEECCCBT--TBCCEEEE
T ss_pred HHHHHHHhhccccccccC-CCeEEEEeCCCCceeeeeecccccceeEEEEEEECCeEEEEEEEeeccCCC--ccceEEEE
Confidence 998877654 33 479999999998653 7886 45666666777888988876 77788899
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCccee-EEEEEEeCCCCcEEEEEecCCCC--cccccccccccCcHHHHHHHHHc-
Q psy15251 249 PAPGISSEFRSRLGSTGVQVARAVRYHNAG-TVEFIMDPSSGEFYFMEMNTRLQ--VEHPVSEMITGVDLVQWQLMVAS- 324 (720)
Q Consensus 249 Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~-~vEf~~~~~~g~~~~iEiNpR~~--~~~~~~e~~tGvdl~~~~l~~a~- 324 (720)
|+ .++++.+++|.+.+.++++++||+|.+ |+||+++ ++|++||||||||++ .++++++.++|+|++++++++++
T Consensus 281 Pa-~l~~~~~~~l~~~a~~~~~alG~~g~~~~vef~~~-~dg~~~~iEvNpR~~G~~~~~~~~~~tG~dl~~~~i~~a~~ 358 (474)
T 3vmm_A 281 PS-ILDEEAKKKIVEAAKKANEGLGLQNCATHTEIKLM-KNREPGLIESAARFAGWNMIPNIKKVFGLDMAQLLLDVLCF 358 (474)
T ss_dssp SC-CCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEE-GGGEEEEEEEESSCCSTTHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred CC-CCCHHHHHHHHHHHHHHHHHcCCCCccEEEEEEEc-CCCCEEEEEEeCCCCCCchHHHHHHHHCcCHHHHHHHHHcC
Confidence 99 699999999999999999999999988 6999999 688899999999999 66899999999999999999999
Q ss_pred CCCCCCCCCCCC-cCeeEEEEEEeecCCCCCC-CCC-C--cceeeeeCCCC---CCcEEEee-cccCC----CeeCCCCC
Q psy15251 325 GQELPLKQEDLQ-LRGHSFETRIYAENPYEGF-LPG-A--GNLTHLRPPEH---SDTIRIET-GVIEG----DEVSVHYD 391 (720)
Q Consensus 325 G~~l~~~~~~~~-~~g~ai~~ri~ae~p~~~f-~p~-~--g~i~~~~~p~~---~~~vr~d~-~v~~G----~~v~~~~d 391 (720)
|+++++.+..+. ..+++..|+++++.+.... .|. . ..|..+..|.. +..+.++. ..-+| ..+-..||
T Consensus 359 G~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (474)
T 3vmm_A 359 GKDADLPDGLLDQEPYYVADCHLYPQHFKQNGQIPETAEDLVIEAIDIPDGLLKGDTEIVSFSAAAPGTSVDLTLFEAFN 438 (474)
T ss_dssp GGGSCCCSSCCCCCSSEEEEEEECHHHHHHTTSSCTTCEEEEEEEEECCTTCCCTTCEEEEEEECCTTEEECTTSCGGGC
T ss_pred CCCCCCCcccccCCCceeEEEEEeccccccccccCCcccceeecceecccceecccceEeeccCCCCCceEEEEeehhcc
Confidence 999998887776 4678889999988754222 332 2 33666777753 23344442 12223 33456799
Q ss_pred CceEEEEEEcCCHHHHHHHHHHHhhcceEec
Q psy15251 392 PMISKLVVWDENRTLALNKMKQALSQYQIAG 422 (720)
Q Consensus 392 ~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G 422 (720)
|.++-++ +|.++++..+.+++.++...+..
T Consensus 439 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 468 (474)
T 3vmm_A 439 SIAAFEL-KGSNSQDVAESIRQIQQHAKLTA 468 (474)
T ss_dssp CCEEEEE-EESCHHHHHHHHHHHHHHCEEEE
T ss_pred CceeEEe-ccccHHHHHHHHHHHHHhhhhhh
Confidence 9988877 99999999999999999887753
No 25
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=100.00 E-value=3.5e-42 Score=378.58 Aligned_cols=358 Identities=18% Similarity=0.211 Sum_probs=289.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
+.|+|+|+|+|.+++.++++++++|+++++++.+++ ++...++|+.+.. +|.|.+.+.+++++ +|+|.+
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~--~~~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvI~~ 81 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN--SPCAQVADIEIVA-------SYDDLKAIQHLAEI--SDVVTY 81 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT--CTTTTTCSEEEEC-------CTTCHHHHHHHHHT--CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC--CchHHhCCceEec-------CcCCHHHHHHHHHh--CCEeee
Confidence 457999999999999999999999999999965554 4456779988763 78899999999975 677866
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeec
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAV 166 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~ 166 (720)
+++. ....++..+++.|+ +||++++++.+.||..+|++|+++|||+|++.. +.+.+++.++++++|||+|+||.
T Consensus 82 ~~e~--~~~~~~~~l~~~g~--~~~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~--~~~~~~~~~~~~~~g~P~vvKp~ 155 (389)
T 3q2o_A 82 EFEN--IDYRCLQWLEKHAY--LPQGSQLLSKTQNRFTEKNAIEKAGLPVATYRL--VQNQEQLTEAIAELSYPSVLKTT 155 (389)
T ss_dssp SCCC--CCHHHHHHHHHHSC--CTTCSHHHHHTTSHHHHHHHHHHTTCCCCCEEE--ESSHHHHHHHHHHHCSSEEEEES
T ss_pred cccc--ccHHHHHHHHhhCc--cCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeEE--ECCHHHHHHHHHhcCCCEEEEeC
Confidence 5543 44677888888886 689999999999999999999999999999987 89999999999999999999999
Q ss_pred CCCC-CcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeEE
Q psy15251 167 RGGG-GKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKII 245 (720)
Q Consensus 167 ~g~G-g~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~ 245 (720)
.|++ |+|++++++.+|+.++++.+. +.++++|+||+|++|+++.++.|.+|++..+...++ .++......
T Consensus 156 ~~~~~g~Gv~~v~~~~el~~~~~~~~--------~~~~lvEe~i~g~~E~~v~~~~~~~G~~~~~~~~e~-~~~~g~~~~ 226 (389)
T 3q2o_A 156 TGGYDGKGQVVLRSEADVDEARKLAN--------AAECILEKWVPFEKEVSVIVIRSVSGETKVFPVAEN-IHVNNILHE 226 (389)
T ss_dssp SCCSSSCCEEEESSGGGHHHHHHHHH--------HSCEEEEECCCCSEEEEEEEEECTTCCEEECCCEEE-EEETTEEEE
T ss_pred CCCCCCCCeEEECCHHHHHHHHHhcC--------CCCEEEEecccCceEEEEEEEEcCCCCEEEecCeee-EEcCCceEE
Confidence 9975 799999999999999987653 478999999998799999999998888776543322 233333334
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcC
Q psy15251 246 EEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASG 325 (720)
Q Consensus 246 e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G 325 (720)
...|+ .++++..+++.+.+.++++++|++|++++||+++ ++|++||+|+|||++.+.+++..++|+|+++++++.++|
T Consensus 227 ~~~p~-~l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~-~dg~~~viEiNpR~~~s~~~~~~~~g~~~~~~~~r~~lg 304 (389)
T 3q2o_A 227 SIVPA-RITEELSQKAIAYAKVLADELELVGTLAVEMFAT-ADGEIYINELAPRPHNSGHYTQDACETSQFGQHIRAICN 304 (389)
T ss_dssp EEESC-SSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-TTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHT
T ss_pred EECCC-CCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEe-CCCCEEEEEeeCCCCCchhHHHHHcCCCHHHHHHHHHcC
Confidence 45677 5999999999999999999999999999999999 788999999999999888888889999999999999999
Q ss_pred CCCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeee-eCCCCCCcEEEee----cccCCCeeCCCCCCceEEEEEE
Q psy15251 326 QELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHL-RPPEHSDTIRIET----GVIEGDEVSVHYDPMISKLVVW 400 (720)
Q Consensus 326 ~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~-~~p~~~~~vr~d~----~v~~G~~v~~~~d~~~a~vi~~ 400 (720)
.+|+.. .....++...++.... ......+ +.| ++.+.. ..++|..+ |++++.
T Consensus 305 ~~l~~~----~~~~~~~~~~~~g~~~-------~~~~~~~~~~p----~~~~~lygk~~~~~~r~~--------G~v~~~ 361 (389)
T 3q2o_A 305 LPLGET----NLLKPVVMVNILGEHI-------EGVLRQVNRLT----GCYLHLYGKEEAKAQRKM--------GHVNIL 361 (389)
T ss_dssp CCCCCC----CBCSCEEEEEEEHHHH-------HHHHHTGGGCT----TEEEEECCCSSCCTTSEE--------EEEEEE
T ss_pred CCCCCc----cccCcEEEEEEecCch-------hhHHHHHHhCC----CCEEEECCCCCCCCCCee--------EEEEEE
Confidence 998743 2333455656654320 0011112 223 333332 12345555 999999
Q ss_pred cCCHHHHHHHHHHHh
Q psy15251 401 DENRTLALNKMKQAL 415 (720)
Q Consensus 401 g~~~~ea~~~~~~al 415 (720)
|+|.++|++++..+-
T Consensus 362 ~~~~~~a~~~a~~~~ 376 (389)
T 3q2o_A 362 NDNIEVALEKAKSLH 376 (389)
T ss_dssp CSSHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHhC
Confidence 999999999987653
No 26
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=100.00 E-value=3e-42 Score=383.37 Aligned_cols=377 Identities=17% Similarity=0.208 Sum_probs=290.4
Q ss_pred EEEEEcCcHHHHHHHHHH-HHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 10 SILIANRGEIACRIMRTA-KKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~-~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
||||+|+|.....+++++ +++|++++++++. +.. ....+| .+. .++.|.+.|++++++.++|+|+|+.
T Consensus 2 ~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~-~~~--~~~~~~-~~~-------~~~~d~~~l~~~~~~~~~d~v~~~~ 70 (424)
T 2yw2_A 2 KVLVVGNGGREHAIAWKVAQSPLVKELYVAKG-NAG--IWEIAK-RVD-------ISPTDVEKLAEFAKNEGVDFTIVGP 70 (424)
T ss_dssp EEEEEESSHHHHHHHHHHTTCTTCSEEEEEEC-CTT--GGGTSE-EEC-------SCTTCHHHHHHHHHHHTCSEEEECS
T ss_pred EEEEECCCHHHHHHHHHHhhCCCCCEEEEECC-Ccc--hhhhcc-ccc-------CCcCCHHHHHHHHHHcCCCEEEECC
Confidence 799999996666666554 5789998888653 222 334455 332 2678999999999999999999974
Q ss_pred CCCcccH---HHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEee
Q psy15251 89 GFLSENA---EFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKA 165 (720)
Q Consensus 89 g~lsE~~---~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp 165 (720)
|+. .+++.+++.|++++||++++++.++||..+|++|+++|||+|++.. +++.+++.++++++|||+|+||
T Consensus 71 ----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~--~~~~~~~~~~~~~~~~PvvvKp 144 (424)
T 2yw2_A 71 ----EAPLVEGIVDEFEKRGLKIFGPNKEAAKLEGSKAFAKTFMKKYGIPTARYEV--FTDFEKAKEYVEKVGAPIVVKA 144 (424)
T ss_dssp ----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEEE--ESCHHHHHHHHHHHCSSEEEEE
T ss_pred ----chHHHHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHcCCCCCCeEE--ECCHHHHHHHHHHcCCcEEEEe
Confidence 544 4678889999999999999999999999999999999999999987 8899999999999999999999
Q ss_pred cCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCC--CCcEEEeccccCCceEEEEEEEcccccEEEEEeeecccccccee
Q psy15251 166 VRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFN--DSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQK 243 (720)
Q Consensus 166 ~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~--~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k 243 (720)
..|+||+||+++++.+|+.++++.+.. .+.|+ +..+++|+||+ ++|+++.++.| |+.++.+ ..++++++
T Consensus 145 ~~g~gg~Gv~~v~~~~el~~~~~~~~~--~~~~g~~~~~~lvEe~i~-g~E~sv~~~~~--G~~~~~~----~~~~~~~~ 215 (424)
T 2yw2_A 145 DGLAAGKGAVVCETVEKAIETLDRFLN--KKIFGKSSERVVIEEFLE-GEEASYIVMIN--GDRYVPL----PTSQDHKR 215 (424)
T ss_dssp SSCCTTCSEEEESSHHHHHHHHHHHHT--SCTTGGGGSSEEEEECCC-SEEEEEEEEEE--TTEEEEC----CCBEECCE
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHh--hhhccCCCCeEEEEECCC-CcEEEEEEEEc--CCEEEee----cceeeccc
Confidence 999999999999999999999988764 22343 36899999999 58999999986 5554443 33444444
Q ss_pred EE------------EEcCCCCCCHHHHHHHH-HHHHHHHHHc-----CCcceeEEEEEEeCCCCcEEEEEecCCCCcc-c
Q psy15251 244 II------------EEAPAPGISSEFRSRLG-STGVQVARAV-----RYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE-H 304 (720)
Q Consensus 244 ~~------------e~~Pa~~l~~~~~~~l~-~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~-~ 304 (720)
.. ..+|++.+++++.+++. +.+.++++++ +|+|++++||+++ ++| +||+|+|||++.. +
T Consensus 216 ~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~-~~g-~~viEiN~R~g~~~~ 293 (424)
T 2yw2_A 216 LLDEDKGPNTGGMGAYSPTPVINEEVEKRIREEIVERVIKGLKEEGIYYRGFLYAGLMIT-KEG-PKVLEFNVRLGDPEA 293 (424)
T ss_dssp EETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHHTCCCEEEEEEEEEEE-TTE-EEEEEEESSCCTTTH
T ss_pred cccCCCCCCCCCCeeECCCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEe-CCC-cEEEEEecCCCCcHH
Confidence 33 34787668999998884 6777777765 7899999999999 778 9999999999854 3
Q ss_pred ccccccccCcHHHHHHHHHcCCCCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcc-eeeeeCCCCCCcEEEeecccCC
Q psy15251 305 PVSEMITGVDLVQWQLMVASGQELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGN-LTHLRPPEHSDTIRIETGVIEG 383 (720)
Q Consensus 305 ~~~e~~tGvdl~~~~l~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~-i~~~~~p~~~~~vr~d~~v~~G 383 (720)
..++.++|+|+++++++++.|. ++.. ....++++.++++++++.. .|..|. |..+..+...+++++. ..|
T Consensus 294 ~~i~~~~g~d~~~~~~~~~~g~-l~~~---~~~~~~a~~~~~~~~g~~~--~~~~g~~i~~~~~~~~~~~~~~~---~~g 364 (424)
T 2yw2_A 294 QPILMRVKNDFLETLLNFYEGK-DVHI---KEDERYALDVVLASRGYPE--KPETGKIIHGLDYLKSMEDVVVF---HAG 364 (424)
T ss_dssp HHHHHTBCSCHHHHHHHHHTTC-CCCC---CBCSSEEEEEEEECTTTTS--SCCCCCBCBCHHHHHTSTTEEEE---ESS
T ss_pred HHHHHHhCCCHHHHHHHHHcCC-CCcc---cccCCcEEEEEEecCCCCC--CCCCCCcCcCcccccCCCCeEEE---Ecc
Confidence 3455578999999999999996 4311 1234788899998875422 344454 4433322112456652 245
Q ss_pred CeeC----CCCCCceEEEEEEcCCHHHHHHHHHHHhhcceEecc
Q psy15251 384 DEVS----VHYDPMISKLVVWDENRTLALNKMKQALSQYQIAGL 423 (720)
Q Consensus 384 ~~v~----~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G~ 423 (720)
..+. ......+++++++|+|+++|+++++++++.++++|+
T Consensus 365 ~~~~~~~~~~~~~r~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~ 408 (424)
T 2yw2_A 365 TKKEGNFTVTSGGRVLNVCAYGKTLKEAKERAYEAIRYVCFEGM 408 (424)
T ss_dssp EEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTC
T ss_pred eEeeCCEEEecCCcEEEEEEEeCCHHHHHHHHHHHHhcceeCCc
Confidence 5442 122345689999999999999999999999999995
No 27
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=100.00 E-value=1.1e-41 Score=372.78 Aligned_cols=360 Identities=18% Similarity=0.259 Sum_probs=284.6
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
.++++|+|+|+|.+++.++++++++|+++++++++++ ++...++|+.+.. +|.|.+.+.+++++ +|+|.
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~--~p~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvi~ 78 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED--CPCRYVAHEFIQA-------KYDDEKALNQLGQK--CDVIT 78 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT--CTTGGGSSEEEEC-------CTTCHHHHHHHHHH--CSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC--ChhhhhCCEEEEC-------CCCCHHHHHHHHHh--CCcce
Confidence 4578999999999999999999999999999966555 4456779998863 68899999999987 68887
Q ss_pred eCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEee
Q psy15251 86 PGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKA 165 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp 165 (720)
++++... ......+++.+ .++|++++++.+.||..+|++|+++|||+|++.. +.+.+++.++++++|||+|+||
T Consensus 79 ~~~E~~~--~~~l~~l~~~~--~v~p~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~--~~~~~~~~~~~~~~g~P~vvKp 152 (377)
T 3orq_A 79 YEFENIS--AQQLKLLCEKY--NIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFIS--VKESTDIDKAIETLGYPFIVKT 152 (377)
T ss_dssp ESSTTSC--HHHHHHHHHHS--CCTTTTHHHHHHHSHHHHHHHHHHTTCCBCCEEE--ECSSTHHHHHHHHTCSSEEEEE
T ss_pred ecccccC--HHHHHHHhhhc--CCCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeEE--ECCHHHHHHHHHHcCCCEEEEe
Confidence 7664332 34445555544 4579999999999999999999999999999987 8888999999999999999999
Q ss_pred cCCC-CCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeE
Q psy15251 166 VRGG-GGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKI 244 (720)
Q Consensus 166 ~~g~-Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~ 244 (720)
..|+ +|+|++++++.+|+.++++.+. +.++++|+||+|.+|+++.++.+.+|++..+...++ ..+.....
T Consensus 153 ~~gg~~g~Gv~~v~~~~el~~a~~~~~--------~~~~ivEe~i~g~~E~sv~~~~~~~g~~~~~~~~e~-~~~~g~~~ 223 (377)
T 3orq_A 153 RFGGYDGKGQVLINNEKDLQEGFKLIE--------TSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQEN-EHRNQILF 223 (377)
T ss_dssp SSSCCTTTTEEEECSTTSHHHHHHHHT--------TSCEEEEECCCEEEEEEEEEEECGGGCEEECCCEEE-EEETTEEE
T ss_pred CCCCCCCCCeEEECCHHHHHHHHHhcC--------CCcEEEEccCCCCEEEEEEEEEeCCCCEEEECCEeE-EEECCEEE
Confidence 9998 8999999999999999887653 478999999997799999999887788766532222 22233233
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHc
Q psy15251 245 IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVAS 324 (720)
Q Consensus 245 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~ 324 (720)
....|+ .+++ .+++.+.+.++++++||+|++++||+++ ++|++||+|+|||++++..++...+++|+++.+++.++
T Consensus 224 ~~~~Pa-~l~~--~~~~~~~a~~i~~~lg~~G~~~ve~~~~-~~g~~~v~EinpR~~~sg~~t~~~~~~s~f~~~~ra~~ 299 (377)
T 3orq_A 224 KTIVPA-RIDK--TAEAKEQVNKIIQSIHFIGTFTVEFFID-SNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVT 299 (377)
T ss_dssp EEEESC-SSCC--HHHHHHHHHHHHTTSCCCEEEEEEEEEE-TTCCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHT
T ss_pred EEECCC-CCCH--HHHHHHHHHHHHHHCCCeEEEEEEEEEe-CCCcEEEEEeeCCcCCCCcEeehhcCCCHHHHHHHHHc
Confidence 445787 4665 8899999999999999999999999999 78899999999999988666767889999999999999
Q ss_pred CCCCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeee-CCCCCCcEEEee--cccCCCeeCCCCCCceEEEEEEc
Q psy15251 325 GQELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLR-PPEHSDTIRIET--GVIEGDEVSVHYDPMISKLVVWD 401 (720)
Q Consensus 325 G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~-~p~~~~~vr~d~--~v~~G~~v~~~~d~~~a~vi~~g 401 (720)
|.|++.. +.....+++..+..++.. +.-..+. .|.. .++++. ..++|.++ |++.+.|
T Consensus 300 G~pl~~~---~~~~~~~~m~n~lg~~~~-------~~~~~~~~~~~~--~~~~ygk~~~~~~rkm--------Ghv~~~~ 359 (377)
T 3orq_A 300 GQSLPNS---IELLKPAVMMNLLGKDLD-------LLENEFNEHPEW--HLHIYGKSERKDSRKM--------GHMTVLT 359 (377)
T ss_dssp TCCCCSC---CCBSSCEEEEEEEHHHHH-------HHGGGGGGCGGG--CEEECCCSSCCTTSEE--------EEEEEEC
T ss_pred CCCCCcc---ccccccEEEEEEeCccch-------hHHHHHhhCCCC--EEEECCCCCCCCCCee--------EEEEEEc
Confidence 9998730 234445778888765310 1111122 2321 234422 23566666 9999999
Q ss_pred CCHHHHHHHHHHHh
Q psy15251 402 ENRTLALNKMKQAL 415 (720)
Q Consensus 402 ~~~~ea~~~~~~al 415 (720)
+|.+++++++..-+
T Consensus 360 ~~~~~~~~~~~~~~ 373 (377)
T 3orq_A 360 NDVNQTEQDMYAKF 373 (377)
T ss_dssp SCHHHHHHHHHHHT
T ss_pred CCHHHHHHHhHHhh
Confidence 99999999987654
No 28
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=100.00 E-value=5.5e-42 Score=370.14 Aligned_cols=335 Identities=13% Similarity=0.133 Sum_probs=271.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
||||+|+|+|..++.++.+++++|+++ ++.+++.+. +.+ . .++|+|+|.
T Consensus 1 Mk~igilGgGqlg~m~~~aa~~lG~~v--~~~~~~a~~---------~~~----------~----------l~~d~it~e 49 (355)
T 3eth_A 1 MKQVCVLGNGQLGRMLRQAGEPLGIAV--WPVGLDAEP---------AAV----------P----------FQQSVITAE 49 (355)
T ss_dssp CCEEEEESCSHHHHHHHHHHGGGTCEE--EEECTTCCG---------GGC----------C----------CTTSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEE--ECCCCCCCc---------eEE----------c----------ccCCEEEEC
Confidence 578999999999999999999999998 444444221 111 1 189999999
Q ss_pred CCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecC
Q psy15251 88 YGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVR 167 (720)
Q Consensus 88 ~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~ 167 (720)
+++++ ..+.+.+++.| +++|++++++.++||..+|++++++|||+||+.. +++.+++.++++++|||+||||..
T Consensus 50 ~e~v~--~~~l~~l~~~~--~v~p~~~a~~~~~DK~~~k~~l~~~GIptp~~~~--v~~~~e~~~~~~~~G~P~VvKp~~ 123 (355)
T 3eth_A 50 IERWP--ETALTRQLARH--PAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQL--LAERSEWPAVFDRLGELAIVKRRT 123 (355)
T ss_dssp CSCCC--CCHHHHHHHTC--TTBTTTTHHHHHHSHHHHHHHHHHTTCCBCCEEE--ECCGGGHHHHHHHHCSEEEEEESS
T ss_pred cCCcC--HHHHHHHHhcC--CcCCCHHHHHHhcCHHHHHHHHHHCccCCCCEEE--ECCHHHHHHHHHHcCCCEEEEecC
Confidence 99887 34677788887 5789999999999999999999999999999987 889999999999999999999998
Q ss_pred C-CCCcceEEeCC--HHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeE
Q psy15251 168 G-GGGKGMRIVRD--SANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKI 244 (720)
Q Consensus 168 g-~Gg~Gv~~v~~--~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~ 244 (720)
+ .+|+|+++|++ .+|+.+++ |+ .+++|+||++++|+++.++.+.+|++.++.. .+.+++.+...
T Consensus 124 ~G~~GkGv~~v~~~~~~el~~a~----------~~--~vivEe~I~~~~Eisv~v~~~~~G~~~~~p~-~e~~~~~g~~~ 190 (355)
T 3eth_A 124 GGYDGRGQWRLRANETEQLPAEC----------YG--ECIVEQGINFSGEVSLVGARGFDGSTVFYPL-THNLHQDGILR 190 (355)
T ss_dssp SCCTTTTEEEEETTCGGGSCGGG----------TT--TEEEEECCCCSEEEEEEEEECTTSCEEECCC-EEEEEETTEEE
T ss_pred CCCCCCeEEEEcCCCHHHHHHHh----------hC--CEEEEEccCCCcEEEEEEEEcCCCCEEEECC-EEEEeeCCeEE
Confidence 5 78899999999 99987632 33 7999999998899999999998888765422 22344544333
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHc
Q psy15251 245 IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVAS 324 (720)
Q Consensus 245 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~ 324 (720)
....|+ .++++..+++.+.+.+++++|||+|++++||+++ + +++||+|+|||+++++.++...+++|+++++++.++
T Consensus 191 ~~~~pa-~l~~~~~~~~~~~a~~i~~aLg~~G~~~vEf~~~-~-~~~~v~EinpR~~~sg~~t~~~~~~s~fe~~~ra~~ 267 (355)
T 3eth_A 191 TSVAFP-QANAQQQARAEEMLSAIMQELGYVGVMAMECFVT-P-QGLLINELAPRVHNSGHWTQNGASISQFELHLRAIT 267 (355)
T ss_dssp EEEECS-SCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEE-T-TEEEEEEEESSCCGGGTTHHHHSSSCHHHHHHHHHT
T ss_pred EEECCC-CCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEE-C-CcEEEEEeeCCCCCCccEEeeeecCCHHHHHHHHHc
Confidence 334555 7999999999999999999999999999999999 4 579999999999999989999999999999999999
Q ss_pred CCCCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEee-cccCCCeeCCCCCCceEEEEEEcCC
Q psy15251 325 GQELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIET-GVIEGDEVSVHYDPMISKLVVWDEN 403 (720)
Q Consensus 325 G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~-~v~~G~~v~~~~d~~~a~vi~~g~~ 403 (720)
|.|++.. .....++++.++.++.. -..+..|.. .++++. ..++|.++ |++.+.|+|
T Consensus 268 G~pl~~~----~~~~~~~m~nilg~~~~---------~~~~~~p~~--~~~~ygk~~r~~rkm--------Ghv~~~~~~ 324 (355)
T 3eth_A 268 DLPLPQP----VVNNPSVMINLIGSDVN---------YDWLKLPLV--HLHWYDKEVRPGRKV--------GHLNLTDSD 324 (355)
T ss_dssp TCCCCCC----CCCSCEEEEEEESCCCC---------GGGGGSTTC--EEEECCCCCCTTCEE--------EEEEEECSC
T ss_pred CCCCCCc----cccCceEEEEEecchHH---------HHHHhCCCC--EEEEcCCCCCCCCee--------EEEEEEcCC
Confidence 9998743 44556888888876511 111223331 233321 13455555 999999999
Q ss_pred HHHHHHHHHHHhhcc
Q psy15251 404 RTLALNKMKQALSQY 418 (720)
Q Consensus 404 ~~ea~~~~~~al~~~ 418 (720)
.++++++++++.+.+
T Consensus 325 ~~~~~~~~~~~~~~~ 339 (355)
T 3eth_A 325 TSRLTATLEALIPLL 339 (355)
T ss_dssp HHHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998875
No 29
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.9e-42 Score=385.65 Aligned_cols=386 Identities=16% Similarity=0.187 Sum_probs=287.4
Q ss_pred CCCEEEEEcCcHHHHHHHHHH-HHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANRGEIACRIMRTA-KKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~-~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
|++||||+|+|.....+++.+ +++|++++++.+..+..+ ..++. ..+. .++.|.+.|++++++.++|+|+
T Consensus 23 m~~~IlIlG~g~r~~al~~~~a~~~g~~~v~~~~~~~~~~---~~~~~-~~~~-----~~~~d~~~l~~~~~~~~~d~V~ 93 (452)
T 2qk4_A 23 MAARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTA---CSEKI-SNTA-----ISISDHTALAQFCKEKKIEFVV 93 (452)
T ss_dssp CSEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECCGGGS---BSSSE-EECC-----CCSSCHHHHHHHHHHHTCCEEE
T ss_pred cCcEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCChhhh---hhccc-cccc-----cCCCCHHHHHHHHHHcCCCEEE
Confidence 457999999997767676665 678999887765433222 33442 2222 2678999999999999999999
Q ss_pred eCCCCCcccH---HHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCc-E
Q psy15251 86 PGYGFLSENA---EFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYP-L 161 (720)
Q Consensus 86 pg~g~lsE~~---~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~P-v 161 (720)
|+. |+. .+++.+++.|++++||++++++.++||..+|++|+++|||+|++.. +++.+++.++++++||| +
T Consensus 94 ~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~--~~~~~~~~~~~~~~g~P~v 167 (452)
T 2qk4_A 94 VGP----EAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQWKA--FTKPEEACSFILSADFPAL 167 (452)
T ss_dssp ECS----SHHHHTTHHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHTTCCBCCEEE--ESSHHHHHHHHHHCSSCEE
T ss_pred ECC----cHHHHHHHHHHHHhcCCcEeCcCHHHHHHhcCHHHHHHHHHHCCCCCCCeEE--ECCHHHHHHHHHhCCCCeE
Confidence 864 443 5677889999999999999999999999999999999999999987 88999999999999999 9
Q ss_pred EEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCC--CCcEEEeccccCCceEEEEEEEccccc-EEEEEeeecccc
Q psy15251 162 MIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFN--DSKVLLEKYIQSPRHIEVQIIGDRYGN-YVYLYERDCSVQ 238 (720)
Q Consensus 162 vvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~--~~~~lvEeyI~g~~~~~v~v~~d~~G~-~v~~~~r~~s~~ 238 (720)
|+||..|+||+|+++|++.+|+.++++.+... ..|+ +.+++||+||+ ++|+++.++.| |+ ++.+.. .
T Consensus 168 vvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-G~E~sv~~~~d--G~~~~~~~~-----~ 237 (452)
T 2qk4_A 168 VVKASGLAAGKGVIVAKSKEEACKAVQEIMQE--KAFGAAGETIVIEELLD-GEEVSCLCFTD--GKTVAPMPP-----A 237 (452)
T ss_dssp EEEESBC---CCEEECSSHHHHHHHHHHHTTC---------CCEEEEECCC-SEEEEEEEEEC--SSCEEECCC-----B
T ss_pred EEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCC-CCeEEEEEEEC--CCEEEEcce-----e
Confidence 99999999999999999999999998876531 2243 36899999999 58999999985 44 444321 2
Q ss_pred cccee------------EEEEcCCCCCCHHHHHHHH-HHHHHHHHHc-----CCcceeEEEEEEeCCCCcEEEEEecCCC
Q psy15251 239 RRHQK------------IIEEAPAPGISSEFRSRLG-STGVQVARAV-----RYHNAGTVEFIMDPSSGEFYFMEMNTRL 300 (720)
Q Consensus 239 r~~~k------------~~e~~Pa~~l~~~~~~~l~-~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiNpR~ 300 (720)
+++++ .....|++.+++++.+++. +.+.++++++ +|+|++++||+++ ++| +||+|+|||+
T Consensus 238 ~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~~~~~~a~~~~~~l~~~g~~~~G~~~ve~~~~-~~g-~~viEiN~R~ 315 (452)
T 2qk4_A 238 QDHKRLLEGDGGPNTGGMGAYCPAPQVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLT-KNG-PKVLEFNCRF 315 (452)
T ss_dssp EEEEEEETTTEEEEEEEEEEEESCTTCCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEEE-TTE-EEEEEEESSC
T ss_pred eecccccCCCCCCCCCCceeeccCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEe-CCC-cEEEEEeccC
Confidence 22222 2244788668999988886 5777777664 6789999999999 778 9999999999
Q ss_pred Ccc-cccccccccCcHHHHHHHHHcCCCCCCCCCCCC-cCee-EEEEEEeecCCCCCCCCCCc-ceeeeeCCCCCCcEEE
Q psy15251 301 QVE-HPVSEMITGVDLVQWQLMVASGQELPLKQEDLQ-LRGH-SFETRIYAENPYEGFLPGAG-NLTHLRPPEHSDTIRI 376 (720)
Q Consensus 301 ~~~-~~~~e~~tGvdl~~~~l~~a~G~~l~~~~~~~~-~~g~-ai~~ri~ae~p~~~f~p~~g-~i~~~~~p~~~~~vr~ 376 (720)
+.. +......+|+|+++++++++.|. ++ +.++. ..++ ++.++++++++.. .|..| .|..+..+. .+++++
T Consensus 316 ~~~~~~~i~~~~g~d~~~~~~~~~~g~-l~--~~~~~~~~~~~a~~~~l~~~g~~~--~~~~g~~i~~l~~~~-~~~v~~ 389 (452)
T 2qk4_A 316 GDPECQVILPLLKSDLYEVIQSTLDGL-LC--TSLPVWLENHTALTVVMASKGYPG--DYTKGVEITGFPEAQ-ALGLEV 389 (452)
T ss_dssp CTTTHHHHGGGBCSCHHHHHHHHHTTC-GG--GGCCCBCTTCEEEEEEEECTTTTS--SCCCSCBCBCHHHHH-HTTCEE
T ss_pred CCcHHHHHHHHhCCCHHHHHHHHHcCC-CC--cccceecCCCcEEEEEEECCCCCC--CCCCCCcccCccccC-CCCcEE
Confidence 965 33355567999999999999996 33 11222 2355 8888898876432 35555 454443221 245565
Q ss_pred eecccCCCeeC----CCCCCceEEEEEEcCCHHHHHHHHHHHhhcceEecc--ccCHH
Q psy15251 377 ETGVIEGDEVS----VHYDPMISKLVVWDENRTLALNKMKQALSQYQIAGL--DTNIN 428 (720)
Q Consensus 377 d~~v~~G~~v~----~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G~--~tn~~ 428 (720)
. ..|..++ ......+++++++|+|+++|+++++++++.+++.|. +++|.
T Consensus 390 ~---~~G~~~~~~~~~~~~~rv~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~~r~di~ 444 (452)
T 2qk4_A 390 F---HAGTALKNGKVVTHGGRVLAVTAIRENLISALEEAKKGLAAIKFEGAIYRKDIG 444 (452)
T ss_dssp E---ESSEEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHHHCBCTTCBCCSCTT
T ss_pred E---ECcEEeeCCeEEecCCeEEEEEEecCCHHHHHHHHHHHHhhcccCCcEEchhcc
Confidence 2 3566542 112234599999999999999999999999999994 44443
No 30
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=8.7e-41 Score=370.83 Aligned_cols=376 Identities=18% Similarity=0.217 Sum_probs=289.6
Q ss_pred EEEEEcCcHHHHHHHHHH-HHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 10 SILIANRGEIACRIMRTA-KKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~-~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
||||+|+|.....+++++ +++|++++++++.. .. ....++ . +. ++.|.+.|++++++.++|+|+|+.
T Consensus 2 kililG~g~r~~a~a~~l~~~~g~~~v~~~~~~-~~--~~~~~~-~--~~------~~~d~~~l~~~~~~~~~d~v~~~~ 69 (417)
T 2ip4_A 2 KVLVVGSGGREHALLWKAAQSPRVKRLYAAPGN-AG--MEALAE-L--VP------WNGDVEALADWALAEGIDLTLVGP 69 (417)
T ss_dssp EEEEEESSHHHHHHHHHHHTCSSCCEEEEEECC-TT--GGGTSE-E--CC------CCSCHHHHHHHHHHHTCCEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEECCC-cc--hhhhcc-c--CC------CccCHHHHHHHHHHcCCCEEEECC
Confidence 799999997777777777 45799988886432 22 222333 2 21 578999999999999999999975
Q ss_pred CCCcccH---HHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEee
Q psy15251 89 GFLSENA---EFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKA 165 (720)
Q Consensus 89 g~lsE~~---~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp 165 (720)
|+. .+++.+++.|++++||++++++.++||..+|++|+++|||+|++.. +++.+++.+++++++||+|+||
T Consensus 70 ----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~--~~~~~~~~~~~~~~~~P~vvKp 143 (417)
T 2ip4_A 70 ----EAPLVEGIADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIPTARYRV--FREPLEALAYLEEVGVPVVVKD 143 (417)
T ss_dssp ----SHHHHTTHHHHHHHHTCCEESCCHHHHHHHHCHHHHHHHHHHTCCCBCCEEE--ESSHHHHHHHHHHHCSSEEEEC
T ss_pred ----chHHHHHHHHHHHHCCCCEECccHHHHHHHcCHHHHHHHHHHcCCCCCCeee--eCCHHHHHHHHHHcCCCEEEEE
Confidence 433 4677888999999999999999999999999999999999999987 8899999999999999999999
Q ss_pred cCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeE-
Q psy15251 166 VRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKI- 244 (720)
Q Consensus 166 ~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~- 244 (720)
..|+||+|++++++.+|+.++++.+. ...|+ ..+++|+||+ ++|+++.++.| |+.++.+ ...+++++.
T Consensus 144 ~~~~gg~Gv~~v~~~~el~~~~~~~~---~~~~~-~~~lvEe~i~-g~E~sv~~~~~--G~~~~~~----~~~~~~~~~~ 212 (417)
T 2ip4_A 144 SGLAAGKGVTVAFDLHQAKQAVANIL---NRAEG-GEVVVEEYLE-GEEATVLALTD--GETILPL----LPSQDHKRLL 212 (417)
T ss_dssp TTSCSSTTCEEESCHHHHHHHHHHHT---TSSSC-CCEEEEECCC-SCEEEEEEEES--SSCEEEC----CCBEECCEEE
T ss_pred CCCCCCCCEEEeCCHHHHHHHHHHHH---hhccC-CeEEEEECcc-CcEEEEEEEEe--CCEEEEc----chheechhhc
Confidence 99999999999999999999988765 12343 7899999999 58999999985 4544433 223333332
Q ss_pred -----------EEEcCCCCCCHHHHHHH-HHHHHHHHHHc-----CCcceeEEEEEEeCCCCcEEEEEecCCCCcc-ccc
Q psy15251 245 -----------IEEAPAPGISSEFRSRL-GSTGVQVARAV-----RYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE-HPV 306 (720)
Q Consensus 245 -----------~e~~Pa~~l~~~~~~~l-~~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~-~~~ 306 (720)
....|++ ++++..+++ .+.+.++++++ +|+|++++||+++ ++| +||+|+|||++.. +..
T Consensus 213 ~~~~~~~~g~~~~~~p~~-l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~-~~g-~~viEiN~R~g~~~~~~ 289 (417)
T 2ip4_A 213 DGDQGPMTGGMGAVAPYP-MDEATLRRVEEEILGPLVRGLRAEGVVYRGVVYAGLMLT-REG-PKVLEFNARFGDPEAQA 289 (417)
T ss_dssp TTTEEEECSCSEEEESCC-CCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEEC-SSC-EEEEEEESSCCTTHHHH
T ss_pred cCCCCCcCCCCeeeeCCC-CCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEEe-CCC-eEEEEEecCCCCcHHHH
Confidence 2347886 899988888 66677777765 7899999999999 778 9999999999865 334
Q ss_pred ccccccCcHHHHHHHHHcCCCCCCCCCCCC-cCeeEEEEEEeecCCCCCCCCCCcc-eeeeeCCCCCCcEEEeecccCCC
Q psy15251 307 SEMITGVDLVQWQLMVASGQELPLKQEDLQ-LRGHSFETRIYAENPYEGFLPGAGN-LTHLRPPEHSDTIRIETGVIEGD 384 (720)
Q Consensus 307 ~e~~tGvdl~~~~l~~a~G~~l~~~~~~~~-~~g~ai~~ri~ae~p~~~f~p~~g~-i~~~~~p~~~~~vr~d~~v~~G~ 384 (720)
...++|+|+++++++++.|.. + +.++. ..++++.+++.++++.. .|..|. |..+..+ +++++. ..|.
T Consensus 290 i~~~~g~d~~~~~~~~~~g~l-~--~~~~~~~~~~~~~~~l~~~~~~~--~~~~g~~i~~~~~~---~~v~~~---~~g~ 358 (417)
T 2ip4_A 290 LLPLLENDLVELALRVAEGRL-A--GTRLSWKEGAAACVVLAAPGYPE--SPRKGIPLHVPEPP---EGVLVF---HAGT 358 (417)
T ss_dssp HTTTBCSCHHHHHHHHHHTCG-G--GCCCCBCSSEEEEEEEECTTTTT--SCCCCCBCBCCCCC---TTEEEE---ESSE
T ss_pred HHHHhCCCHHHHHHHHHcCCC-C--cCCccccCCcEEEEEEeCCCCCC--CCCCCCcccccCCC---CCeEEE---ECce
Confidence 455789999999999999963 2 11223 23688888888775432 455665 5544432 456653 3566
Q ss_pred eeCC----CCCCceEEEEEEcCCHHHHHHHHHHHhhcceEecc--ccCHH
Q psy15251 385 EVSV----HYDPMISKLVVWDENRTLALNKMKQALSQYQIAGL--DTNIN 428 (720)
Q Consensus 385 ~v~~----~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G~--~tn~~ 428 (720)
.++. .....+|+|+++|+|+++|+++++++++.+++.|. +++|.
T Consensus 359 ~~~~~~~~~~~~rv~~v~~~g~~~~~a~~~~~~~~~~i~~~~~~~r~dig 408 (417)
T 2ip4_A 359 RREGGRLVSAGGRVLNVVGLGRDLKEALERAYAYIPQVGFPGAVYRRDIG 408 (417)
T ss_dssp EESSSSEEECSSEEEEEEEEESSHHHHHHHHHHHGGGSBCTTCBCCSCTT
T ss_pred EeeCCeEEecCCcEEEEEEEcCCHHHHHHHHHHHHhcCccCCcEEccchh
Confidence 5531 11233699999999999999999999999999994 44443
No 31
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=100.00 E-value=6.4e-42 Score=373.20 Aligned_cols=361 Identities=14% Similarity=0.161 Sum_probs=240.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
|+||||+|+|..+..++++++++|+++++++++++ .....++|+.+..+ .+.+++ .++|+|+++
T Consensus 1 M~~Ililg~g~~~~~~~~a~~~~G~~v~~~~~~~~--~~~~~~~~~~~~~~------------~l~~~~--~~~d~v~~~ 64 (365)
T 2z04_A 1 MLTVGILGGGQLGWMTILEGRKLGFKFHVLEDKEN--APACRVADRCFRTG------------QISEFV--DSCDIITYE 64 (365)
T ss_dssp -CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSSS--CHHHHHSSEEECGG------------GHHHHH--HHCSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC--CchhhhccceeeHH------------HHHHHh--hcCCEEEEC
Confidence 57999999999999999999999999999965443 34567788877421 567777 578999998
Q ss_pred CCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecC
Q psy15251 88 YGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVR 167 (720)
Q Consensus 88 ~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~ 167 (720)
++... ..+++.++. ++||++++++.++||..+|++|+++|||+|++.. ++ .+++.++++++|||+|+||..
T Consensus 65 ~e~~~--~~~~~~l~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~--~~-~~~~~~~~~~~~~P~vvKp~~ 135 (365)
T 2z04_A 65 FEHIK--DEVLEKCES----KLIPNPQALYVKKSRIREKLFLKKHGFPVPEFLV--IK-RDEIIDALKSFKLPVVIKAEK 135 (365)
T ss_dssp SSCCC--HHHHHHHTT----TBSSCTHHHHHHTCHHHHHHHHHTTTCCCCCEEE--C---------------CEEEECC-
T ss_pred CCCCc--HHHHHHHhh----hcCCCHHHHHHhhCHHHHHHHHHHcCCCCCCEEE--Ec-HHHHHHHHHhcCCCEEEEEcC
Confidence 86433 234555543 6799999999999999999999999999999987 66 788888888999999999999
Q ss_pred CC-CCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeEEE
Q psy15251 168 GG-GGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKIIE 246 (720)
Q Consensus 168 g~-Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~~e 246 (720)
|+ ||+|++++++.+|+.++++.+. ++..+++|+||++++|+++.++.|++|+++.+...++ .++.+.....
T Consensus 136 ~~~~g~Gv~~v~~~~el~~~~~~~~-------~~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~~~~~~-~~~~~~~~~~ 207 (365)
T 2z04_A 136 LGYDGKGQYRIKKLEDANQVVKNHD-------KEESFIIEEFVKFEAEISCIGVRDREGKTYFYPQPFN-KHEEGILIYN 207 (365)
T ss_dssp ------------------------------------CEEEECCCCSEEEEEEEEECTTCCEEECCEEEE-EEETTEEEEE
T ss_pred CCcCCCCeEEECCHHHHHHHHHHhc-------cCCCEEEEccCCCCEEEEEEEEECCCCCEEEECCEEE-EEeCCEeEEE
Confidence 99 9999999999999998887654 2578999999996799999999998788776543332 2333333345
Q ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcCC
Q psy15251 247 EAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASGQ 326 (720)
Q Consensus 247 ~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G~ 326 (720)
..|++ + .+++.+.+.++++++||+|.+++||+++ ++|++||+|+|||++.....+...+|+|+++.+++.++|.
T Consensus 208 ~~p~~-~----~~~~~~~~~~~~~~lg~~G~~~vd~~~~-~~g~~~~iEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~g~ 281 (365)
T 2z04_A 208 YVPYA-K----LKEAEEITKRLMELLDIVGVFTVEFFLL-KDGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEM 281 (365)
T ss_dssp EEEEE-C----CHHHHHHHHHHHHHTTCCEEEEEEEEEC-TTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHTTC
T ss_pred ECCHh-H----HHHHHHHHHHHHHHcCCEEEEEEEEEEe-CCCcEEEEEeccCcCCCceEEeeccccCHHHHHHHHHhCC
Confidence 56763 3 5789999999999999999999999999 7888999999999986433366788999999999999999
Q ss_pred CCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCeeCCCCCCceEEEEEEcCCHHH
Q psy15251 327 ELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEVSVHYDPMISKLVVWDENRTL 406 (720)
Q Consensus 327 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v~~~~d~~~a~vi~~g~~~~e 406 (720)
+++..+ ..+.+..++++++++. | +.+..+. . .+++++.. . |.. ...+..+|+++++|+|+++
T Consensus 282 ~l~~~~----~~~~~~~~~~~~~~~~----~--~~~~~~~--~-~~~~~~~~--~-g~~--~~~~~~lg~v~~~g~~~~~ 343 (365)
T 2z04_A 282 PLGSTE----LKLPSGMVNILGKSYE----E--IPLKEIL--S-VEGAKLYW--Y-GKE--KKPRRKVGHVNVVGRSKEE 343 (365)
T ss_dssp CCCCCC----BSSCEEEEEEESCCGG----G--SCHHHHT--T-STTEEEEE--C-CCC--CCTTCEEEEEEEECSSHHH
T ss_pred CCCCcc----ccCCEEEEEEECCccc----c--chHHHHh--c-CCCCEEEe--c-CCC--CCCCCeEEEEEEecCCHHH
Confidence 987542 1233678889887631 2 2333222 1 24554422 1 542 2346788999999999999
Q ss_pred HHHHHHHHhhcceEecccc
Q psy15251 407 ALNKMKQALSQYQIAGLDT 425 (720)
Q Consensus 407 a~~~~~~al~~~~i~G~~t 425 (720)
|+++++++++.++++|+.-
T Consensus 344 a~~~~~~~~~~i~~~~~~~ 362 (365)
T 2z04_A 344 VVEKVERVFTLLKGSREKL 362 (365)
T ss_dssp HHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHhhhccCCC
Confidence 9999999999999999754
No 32
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=2.3e-40 Score=366.70 Aligned_cols=371 Identities=16% Similarity=0.110 Sum_probs=277.9
Q ss_pred CCEEEEEcCcHHHHHHHHH-HHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 8 LDSILIANRGEIACRIMRT-AKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira-~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
.+||||+|+|.....++.+ ++++| +++++.. + +....+|+. + |.+.|++++++.++|+|+|
T Consensus 15 ~~~vlviG~Ggr~~a~a~~~a~~~g-~v~~~~~--n---p~~~~~d~~--i----------d~~~l~~~~~~~~~d~V~~ 76 (412)
T 1vkz_A 15 AVRVHILGSGGREHAIGWAFAKQGY-EVHFYPG--N---AGTKRDGTN--H----------PYEGEKTLKAIPEEDIVIP 76 (412)
T ss_dssp -CEEEEEECSHHHHHHHHHHHHTTC-EEEEEEC--C---TTGGGTSEE--C----------CCCTHHHHHTSCSSCEECC
T ss_pred cCEEEEECCCHHHHHHHHHHHhCCC-CEEEECC--C---hhhhccccc--C----------CHHHHHHHHHHcCCCEEEE
Confidence 3489999999776665555 47889 8777722 1 234456754 2 4678999999999999998
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeec
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAV 166 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~ 166 (720)
+. |++.++.+++.++. ++||++++++.++||..+|++|+++|||+|++.. +++.+++.++++++|||+||||.
T Consensus 77 ~~----E~~~~a~~~~~l~~-~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~--~~~~~e~~~~~~~~g~PvvvKp~ 149 (412)
T 1vkz_A 77 GS----EEFLVEGVSNWRSN-VFGPVKEVARLEGSKVYAKRFMKKYGIRTARFEV--AETPEELREKIKKFSPPYVIKAD 149 (412)
T ss_dssp SS----GGGTCC-----CTT-BSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEE--ESSHHHHHHHHTTSCSSEEEEES
T ss_pred CC----cHHHHHHHHHHhhh-hhCCCHHHHHHhcCHHHHHHHHHHcCCCCCCEEE--ECCHHHHHHHHHhcCCCEEEEeC
Confidence 53 55656678888887 7899999999999999999999999999999877 88999999999999999999999
Q ss_pred CCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCC-CcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccc----
Q psy15251 167 RGGGGKGMRIVRDSANFLAQLRSAQRESQSAFND-SKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRH---- 241 (720)
Q Consensus 167 ~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~-~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~---- 241 (720)
.|+||+||++|++.+|+.++++.+.... ..|+. ++++||+||+ ++|++++++.| |+.+..+...+..++.+
T Consensus 150 ~~~gg~Gv~~v~~~~el~~a~~~~~~~~-~~~g~~~~vlvEe~i~-G~E~sv~~~~d--g~~~~~~~~~~~~~~~~~~~~ 225 (412)
T 1vkz_A 150 GLARGKGVLILDSKEETIEKGSKLIIGE-LIKGVKGPVVIDEFLA-GNELSAMAVVN--GRNFVILPFVRDYKRLMDGDR 225 (412)
T ss_dssp SCCSSCCEEEESSHHHHHHHHHHHHHTS-SSTTCCSCEEEEECCC-SEEEEEEEEEE--TTEEEECCCCEECCEEETTTE
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHhhc-cccCCCCeEEEEECCc-CcEEEEEEEEC--CCEEEEeeeeEeeeeccCCCC
Confidence 9999999999999999999998876431 03443 4899999999 69999999996 44443332222222221
Q ss_pred ----eeEEEEcCCCCCCHHHHHHHHHHHHHHHHHc-----CCcceeEEEEEEeCCCCcEEEEEecCCCCcc-cccccccc
Q psy15251 242 ----QKIIEEAPAPGISSEFRSRLGSTGVQVARAV-----RYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE-HPVSEMIT 311 (720)
Q Consensus 242 ----~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~-~~~~e~~t 311 (720)
......+|++ +++++.+++.+.+.+++++| +|+|++++||+++ ++| +||+|+|||++.. +..++..+
T Consensus 226 ~~~~g~~~~~~P~~-l~~~~~~~i~~~a~~~~~~l~~~g~~~~G~~~ve~~~~-~~g-~~viEiN~R~g~~~~~~~~~~~ 302 (412)
T 1vkz_A 226 GPNTGGMGSWGPVE-IPSDTIKKIEELFDKTLWGVEKEGYAYRGFLYLGLMLH-DGD-PYILEYNVRLGDPETEVIVTLN 302 (412)
T ss_dssp EEECSCSEEEECCC-CCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEE-TTE-EEEEEEESSCCTTHHHHHHHHC
T ss_pred CCCCCCceEEECCC-CCHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEEE-CCC-cEEEEEecCCCCCcceeehhhc
Confidence 1123568986 99999999999999999999 8899999999999 777 9999999999954 65666678
Q ss_pred cCcHHHHHHHHHcCCCCCCCCCCCCcCeeEEEEEEeecCCCCCCCCCCcceeeeeCCCCCCcEEEeecccCCCee----C
Q psy15251 312 GVDLVQWQLMVASGQELPLKQEDLQLRGHSFETRIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIETGVIEGDEV----S 387 (720)
Q Consensus 312 Gvdl~~~~l~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v~~G~~v----~ 387 (720)
|+|+.+++++++.|...++ . ...+++ .++++++++. .+.|..|.+..+..|. .++. .|..+ .
T Consensus 303 g~d~~~~~~~~~~g~l~~~---~-~~~~~a-~~~~l~~~~~-~~~~~~g~~i~l~~~~---~v~~-----~g~~~~~~~~ 368 (412)
T 1vkz_A 303 PEGFVNAVLEGYRGGKMEP---V-EPRGFA-VDVVLAARGY-PDAPEKGKEITLPEEG---LIFF-----AGVAEKDGKL 368 (412)
T ss_dssp HHHHHHHHHHHHHTSCCCC---C-CCCSEE-EEEEEECTTT-TTSCCCCCBCBCCSSC---CEEE-----SSEEEETTEE
T ss_pred CCCHHHHHHHHhcCCCccc---c-ccCCeE-EEEEEecCCC-CCCCCCCCEeeeCCCC---cEEE-----CcccccCCeE
Confidence 9999999999998863221 1 122455 4667766432 2345556533333321 2322 23331 1
Q ss_pred CCCCCceEEEEEEcCCHHHHHHHHHHHhhcceEeccc
Q psy15251 388 VHYDPMISKLVVWDENRTLALNKMKQALSQYQIAGLD 424 (720)
Q Consensus 388 ~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G~~ 424 (720)
...+.++|+++++|+|+++|+++++++++.++++|+.
T Consensus 369 ~~~~~~vg~v~~~g~~~~ea~~~~~~~~~~i~~~g~~ 405 (412)
T 1vkz_A 369 VTNGGRVLHCMGTGETKEEARRKAYELAEKVHFEGKT 405 (412)
T ss_dssp EECSSEEEEEEEEESSHHHHHHHHHHHHHHCBCTTCB
T ss_pred EeCCCcEEEEEEeCCCHHHHHHHHHHHhcceeeCCCE
Confidence 2235668999999999999999999999999999953
No 33
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=100.00 E-value=7.3e-40 Score=367.01 Aligned_cols=375 Identities=20% Similarity=0.211 Sum_probs=275.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHH-HHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANRGEIACRIMRTA-KKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~-~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
+.+||||+|+|.....+++++ +++|++++++++. +.. ....++ .+. .++.|.+.|++++++.++|+|+
T Consensus 20 ~~~~iliiG~g~r~~a~a~~~~~~~g~~~v~~~~~-~~~--~~~~~~-~~~-------~~~~d~~~l~~~~~~~~~d~vi 88 (451)
T 2yrx_A 20 SHMNVLVIGRGGREHAIAWKAAQSPLVGKLYVAPG-NPG--IADVAE-LVH-------IDELDIEALVQFAKQQAIDLTI 88 (451)
T ss_dssp SSEEEEEEECSHHHHHHHHHHHTCTTEEEEEEEEC-CTT--GGGTSE-ECC-------CCTTCHHHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECC-Chh--hhhhCc-eec-------cCCCCHHHHHHHHHHcCCCEEE
Confidence 346999999997766666655 5689998877553 222 233444 221 2567899999999999999999
Q ss_pred eCCCCCcccH---HHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEE
Q psy15251 86 PGYGFLSENA---EFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLM 162 (720)
Q Consensus 86 pg~g~lsE~~---~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~Pvv 162 (720)
|+. |+. .+++.+++.|++++||++++++.++||..+|++|+++|||+|++.. +++.+++.+++++++||+|
T Consensus 89 ~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~--~~~~~~~~~~~~~~~~PvV 162 (451)
T 2yrx_A 89 VGP----EAPLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAA--FTSYEEAKAYIEQKGAPIV 162 (451)
T ss_dssp ECS----HHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEE--ESCHHHHHHHHHHHCSSEE
T ss_pred ECC----chHHHHHHHHHHHHCCCCEeCccHHHHHHhhCHHHHHHHHHHcCCCCCCeEE--ECCHHHHHHHHHhcCCcEE
Confidence 865 433 4577888999999999999999999999999999999999999987 8899999999999999999
Q ss_pred EeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCC--CCcEEEeccccCCceEEEEEEEcccccEEEEEeeecccccc
Q psy15251 163 IKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFN--DSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRR 240 (720)
Q Consensus 163 vKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~--~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~ 240 (720)
|||..|+||+|++++++.+|+.++++.+... ..|+ +.+++||+||+ ++|+++.++.| |+.+..+ ...++
T Consensus 163 vKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-G~E~sv~~~~d--G~~~~~~----~~~~~ 233 (451)
T 2yrx_A 163 IKADGLAAGKGVTVAQTVEEALAAAKAALVD--GQFGTAGSQVVIEEYLE-GEEFSFMAFVN--GEKVYPL----AIAQD 233 (451)
T ss_dssp EEECC----CCEEEESSHHHHHHHHHHHHHH--SCCBTTBCCEEEEECCC-SEEEEEEEEEE--TTEEEEC----CCBEE
T ss_pred EEeCCCCCCCcEEEECCHHHHHHHHHHHHhc--cccCCCCCeEEEEECCc-CcEEEEEEEEc--CCEEEEe----eeEEe
Confidence 9999999999999999999999999887652 2344 37899999999 58999999986 5554433 12222
Q ss_pred ceeE------------EEEcCCCCCCHHHHHHH-HHHHHHHHHHc-----CCcceeEEEEEEeCCCCcEEEEEecCCCCc
Q psy15251 241 HQKI------------IEEAPAPGISSEFRSRL-GSTGVQVARAV-----RYHNAGTVEFIMDPSSGEFYFMEMNTRLQV 302 (720)
Q Consensus 241 ~~k~------------~e~~Pa~~l~~~~~~~l-~~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiNpR~~~ 302 (720)
+++. ....|++.+++++.+++ .+.+.++++++ +|.|++++||+++ ++| +||+|+|||++.
T Consensus 234 ~~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~-~~g-~~viEiN~R~g~ 311 (451)
T 2yrx_A 234 HKRAYDGDEGPNTGGMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVLYAGLMAT-ANG-PKVIEFNARFGD 311 (451)
T ss_dssp CCEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEE-TTE-EEEEEEESSCCT
T ss_pred ccccccCCCCCCCCCCeEEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEe-CCC-cEEEEEecCCCC
Confidence 2222 23468766899988888 66677777665 6789999999999 777 999999999986
Q ss_pred c-cccccccccCcHHHHHHHHHcCCCCCCCCCCCCcCeeEEEEEEe----ecCCCCCCCCCCcceeeeeCCCCCCcEEEe
Q psy15251 303 E-HPVSEMITGVDLVQWQLMVASGQELPLKQEDLQLRGHSFETRIY----AENPYEGFLPGAGNLTHLRPPEHSDTIRIE 377 (720)
Q Consensus 303 ~-~~~~e~~tGvdl~~~~l~~a~G~~l~~~~~~~~~~g~ai~~ri~----ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d 377 (720)
. +.....++|+|+.+++++++.|...++. ...++++...+. +++|..++ .|..+... . +++++.
T Consensus 312 ~~~~~i~~~~g~d~~~~~~~~~~g~~~~~~----~~~~~~~~~~l~~~g~p~~~~~g~-----~i~~~~~~-~-~~~~v~ 380 (451)
T 2yrx_A 312 PEAQVVLPRLKTDLVEAVLAVMDGKELELE----WTDEAVLGVVLAAKGYPGAYERGA-----EIRGLDRI-S-PDALLF 380 (451)
T ss_dssp THHHHHGGGBCSCHHHHHHHHHTTCCCCCC----BCSSEEEEEEEEETTTTSSCCCCC-----EEBCGGGS-C-TTSEEE
T ss_pred cHHHHHHHHcCCCHHHHHHHHhcCCCCCcc----ccCCceEEEEEecCCcCCCCCCCC-----cCcCcccc-C-CCCEEE
Confidence 5 3455567899999999999999754321 223455544443 33343333 11111110 0 233332
Q ss_pred ecccCCCee----CCCCCCceEEEEEEcCCHHHHHHHHHHHhhcceEecc
Q psy15251 378 TGVIEGDEV----SVHYDPMISKLVVWDENRTLALNKMKQALSQYQIAGL 423 (720)
Q Consensus 378 ~~v~~G~~v----~~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G~ 423 (720)
. .|..+ .......+|++++.|+|+++|+++++++++.+++.|.
T Consensus 381 ~---~G~~~~~~~~~~~~~rvg~v~~~g~~~~ea~~~~~~~~~~i~~~~~ 427 (451)
T 2yrx_A 381 H---AGTKREGGAWYTNGGRVLLLAAKGETLAKAKEKAYEQLAAIDCDGL 427 (451)
T ss_dssp E---SSEEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTE
T ss_pred e---CcccccCCeEEcCCCeEEEEEEEeCCHHHHHHHHHHHhhccccCCe
Confidence 1 23332 1122356799999999999999999999999999884
No 34
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=100.00 E-value=3.2e-39 Score=358.82 Aligned_cols=376 Identities=19% Similarity=0.226 Sum_probs=280.3
Q ss_pred EEEEEcCcHHHHHHHHHH-HHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 10 SILIANRGEIACRIMRTA-KKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~-~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
||||+|+|.....+++++ +++|++++++++. +. ....++| .+ . .++.|.+.+++++++.++|+|+|+.
T Consensus 2 ~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~-~~--~~~~~~~-~~--~-----~~~~d~~~l~~~~~~~~~d~v~~~~ 70 (422)
T 2xcl_A 2 NVLIIGKGGREHTLAWKAAQSSLVENVFAAPG-ND--GMAASAQ-LV--N-----IEESDHAGLVSFAKQNQVGLTIVGP 70 (422)
T ss_dssp EEEEEECSHHHHHHHHHHTTCTTCSEEEEEEC-CG--GGTTTCE-EC--C-----CCTTCHHHHHHHHHHTTEEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEeCC-Ch--hhhhhcc-cc--c-----cCcCCHHHHHHHHHHcCCCEEEECC
Confidence 799999997777777766 4579999888653 22 2334555 32 1 2678999999999999999999864
Q ss_pred CCCcccH---HHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEee
Q psy15251 89 GFLSENA---EFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKA 165 (720)
Q Consensus 89 g~lsE~~---~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp 165 (720)
|+. .+++.+++.|++++||++++++.++||..+|++|+++|||+|++.. +++.+++.+++++++||+|+||
T Consensus 71 ----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~--~~~~~~~~~~~~~~~~P~vvKp 144 (422)
T 2xcl_A 71 ----EVPLIEGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEYET--FTSFDEAKAYVQEKGAPIVIKA 144 (422)
T ss_dssp ----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEEE--ESCHHHHHHHHHHHCSSEEEEE
T ss_pred ----cHHHHHHHHHHHHHCCCCEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCeEE--ECCHHHHHHHHHhcCCCEEEEe
Confidence 434 4677788999999999999999999999999999999999999987 8899999999999999999999
Q ss_pred cCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCC--CCcEEEeccccCCceEEEEEEEcccccEEEEEeeecccccccee
Q psy15251 166 VRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFN--DSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQK 243 (720)
Q Consensus 166 ~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~--~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k 243 (720)
..|+||+|++++++.+|+.++++.+... ..|+ +.++++|+||+ ++|+++.++.| |+.++.+ ...+++.+
T Consensus 145 ~~~~~g~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-g~E~sv~~~~d--G~~~~~~----~~~~~~~~ 215 (422)
T 2xcl_A 145 DGLAAGKGVTVAMTEEEAIACLHDFLED--EKFGDASASVVIEEYLS-GEEFSLMAFVK--GEKVYPM----VIAQDHKR 215 (422)
T ss_dssp SSCGGGTCEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCC-SEEEEEEEEEE--TTEEEEC----CCBEEEEE
T ss_pred CCCCCCCcEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCc-CcEEEEEEEEc--CCEEEec----ceeeeeeh
Confidence 9999999999999999999999877541 2233 36899999999 58999999986 4544432 11222222
Q ss_pred ------------EEEEcCCCCCCHHHHHHHHH-HHHHHHHHc-----CCcceeEEEEEEeCCCCcEEEEEecCCCCcc-c
Q psy15251 244 ------------IIEEAPAPGISSEFRSRLGS-TGVQVARAV-----RYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE-H 304 (720)
Q Consensus 244 ------------~~e~~Pa~~l~~~~~~~l~~-~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~-~ 304 (720)
.....|++.+++++.+++.+ .+.++++++ +|+|++++||+++ ++| +||+|+|||++.. +
T Consensus 216 ~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~vd~~~~-~~g-~~viEiN~R~g~~~~ 293 (422)
T 2xcl_A 216 AFDGDKGPNTGGMGAYSPVPQISEETVRHAVETIVKPAAKAMVQEGRSFTGVLYAGLMLT-ENG-SKVIEFNARFGDPET 293 (422)
T ss_dssp EEGGGEEEEEEEEEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEE-TTE-EEEEEEESSCCTTTH
T ss_pred hcCCCCCCCCCCCeeEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeeEEEe-CCC-cEEEEEecCCCCcHH
Confidence 12446876689988888854 677777665 6789999999999 777 9999999999865 4
Q ss_pred ccccccccCcHHHHHHHHHcCCCCCCCCCCCCcCeeEEEEEEeec----CCCCCCCCCCcceeeeeCCCCCCcEEEeecc
Q psy15251 305 PVSEMITGVDLVQWQLMVASGQELPLKQEDLQLRGHSFETRIYAE----NPYEGFLPGAGNLTHLRPPEHSDTIRIETGV 380 (720)
Q Consensus 305 ~~~e~~tGvdl~~~~l~~a~G~~l~~~~~~~~~~g~ai~~ri~ae----~p~~~f~p~~g~i~~~~~p~~~~~vr~d~~v 380 (720)
.....++|+|+.+++++++.|...++ . ...++++.+.+.+. ++..++ +-.| +..+. +++++..
T Consensus 294 ~~i~~~~g~d~~~~~~~~~~g~l~~~---~-~~~~~~~~~~~~~~g~~~~~~~g~-~i~~-~~~~~-----~~~~~~~-- 360 (422)
T 2xcl_A 294 QVVLPRMESDLVQVLLDLLDDKEVDL---R-WKDTAAVSVVLASEGYPESYAKGT-PIGS-LAAET-----EQVVVFH-- 360 (422)
T ss_dssp HHHGGGBCSCHHHHHHHHHTTCCCCC---C-BCSCEEEEEEEEETTTTSCCCSCC-BCCC-CCCCS-----SSEEEEE--
T ss_pred HHHHHhcCCCHHHHHHHHHcCCcCcc---c-ccCCceEEEEEECCCCCCCCCCCC-cccC-cccCC-----CCcEEEE--
Confidence 44556789999999999999964332 1 22345555555433 333322 1111 21111 3555522
Q ss_pred cCCCe-----eCCCCCCceEEEEEEcCCHHHHHHHHHHHhhcceEecc--ccCHH
Q psy15251 381 IEGDE-----VSVHYDPMISKLVVWDENRTLALNKMKQALSQYQIAGL--DTNIN 428 (720)
Q Consensus 381 ~~G~~-----v~~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G~--~tn~~ 428 (720)
.|.. ....++. +++++++|+|+++|+++++++++.+++.|. +++|.
T Consensus 361 -~g~~~~~~~~~~~~~r-~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~~r~di~ 413 (422)
T 2xcl_A 361 -AGTKAEGGEFVTNGGR-VANVTAFDETFEAARDRVYKAVDEIFKPGLFFRKDIG 413 (422)
T ss_dssp -SSEEECSSSEEECSSE-EEEEEEEESSHHHHHHHHHHHHHHHCCTTEECCSCTT
T ss_pred -eeeEeeCCEEEeCCCc-eEEEEEEeCCHHHHHHHHHHHHhcceeCCcEecchhh
Confidence 2322 2223344 789999999999999999999999999983 44443
No 35
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=100.00 E-value=1.1e-38 Score=354.65 Aligned_cols=387 Identities=17% Similarity=0.155 Sum_probs=282.6
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCC-cEEEEeeCCCCCCccccccc-EEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 9 DSILIANRGEIACRIMRTAKKMGI-RVVSVYSDIDADALHVKMAD-EAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G~-~~v~v~s~~d~~~~~~~~aD-~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
.||||+|+|.....+++++++.+. ..+.+.. .+ ......++ ..+. -++.|.+.|++++++.++|+|+|
T Consensus 4 mkvlviG~ggre~ala~~l~~s~~v~~v~~~p-gn--~g~~~~~~~~~~~-------~~~~d~~~l~~~a~~~~id~vv~ 73 (431)
T 3mjf_A 4 MNILIIGNGGREHALGWKAAQSPLADKIYVAP-GN--AGTALEPTLENVD-------IAATDIAGLLAFAQSHDIGLTIV 73 (431)
T ss_dssp EEEEEEECSHHHHHHHHHHTTCTTEEEEEEEE-CC--HHHHHCTTCEECC-------CCTTCHHHHHHHHHHTTEEEEEE
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCCCEEEEEC-CC--HHHhhhcccceec-------CCcCCHHHHHHHHHHhCcCEEEE
Confidence 489999999888899999988763 3344432 11 11122232 2222 26689999999999999999999
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeec
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAV 166 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~ 166 (720)
+.+... ...+++.+++.|++++||+++++++++||..+|++|+++|||+|++.. +++.+++.++++++|||+||||.
T Consensus 74 g~e~~l-~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIptp~~~~--~~~~~ea~~~~~~~g~PvVvKp~ 150 (431)
T 3mjf_A 74 GPEAPL-VIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQN--FTDVEAALAYVRQKGAPIVIKAD 150 (431)
T ss_dssp CSHHHH-HTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCSBCCEEE--ESCHHHHHHHHHHHCSSEEEEES
T ss_pred CCchHH-HHHHHHHHHhcCCCeeCCCHHHHHHhhCHHHHHHHHHHcCCCCCCeEe--eCCHHHHHHHHHHcCCeEEEEEC
Confidence 754210 124788999999999999999999999999999999999999999987 88999999999999999999999
Q ss_pred CCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCC--CCcEEEeccccCCceEEEEEEEcccccEEEEEeeeccccccceeE
Q psy15251 167 RGGGGKGMRIVRDSANFLAQLRSAQRESQSAFN--DSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRRHQKI 244 (720)
Q Consensus 167 ~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~--~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~~k~ 244 (720)
.++||+||+++++.+|+.++++.+... ..|+ +..++|||||+ ++|+++.++.|++ +++.+.. .++|++.
T Consensus 151 ~~~gg~GV~iv~~~~el~~a~~~~~~~--~~~g~~~~~vlvEe~i~-G~E~sv~~~~dg~-~~~~~~~-----~~~~~~~ 221 (431)
T 3mjf_A 151 GLAAGKGVIVAMTQEEAETAVNDMLAG--NAFGDAGHRIVVEEFLD-GEEASFIVMVDGE-NVLPMAT-----SQDHKRV 221 (431)
T ss_dssp SSCTTCSEEEECSHHHHHHHHHHHHTT--HHHHCCCCCEEEEECCC-SEEEEEEEEEESS-CEEECCC-----BEECCEE
T ss_pred CCCCCCcEEEeCCHHHHHHHHHHHHhh--ccccCCCCeEEEEEeeC-CcEEEEEEEEcCC-EEEEEEe-----eEeceec
Confidence 999999999999999999999887632 1233 36899999999 5999999999864 5555432 2333333
Q ss_pred ------------EEEcCCCCCCHHHHHHHHHH----HHHHHHHcCC--cceeEEEEEEeCCCCcEEEEEecCCCCcc-cc
Q psy15251 245 ------------IEEAPAPGISSEFRSRLGST----GVQVARAVRY--HNAGTVEFIMDPSSGEFYFMEMNTRLQVE-HP 305 (720)
Q Consensus 245 ------------~e~~Pa~~l~~~~~~~l~~~----a~~i~~alg~--~G~~~vEf~~~~~~g~~~~iEiNpR~~~~-~~ 305 (720)
...+|++.++++..+++.+. +.++++++|+ +|++++||+++ ++|++||||+|||+|.. ..
T Consensus 222 ~~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~~~~~~~~~g~~~~G~~~ve~~~~-~~g~~~viEiN~R~G~~~~~ 300 (431)
T 3mjf_A 222 GDGDTGPNTGGMGAYSPAPVVTDDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYAGLMIS-ADGQPKVIEFNCRFGDPETQ 300 (431)
T ss_dssp ETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEC-TTSCEEEEEECGGGSTTTHH
T ss_pred ccCCCCCCCCCceEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEEEe-CCCCeEEEEEecCCCCcHHH
Confidence 23578877999999998886 6777777665 89999999999 77889999999999822 23
Q ss_pred cccccccCcHHHHHHHHHcCCCCCCCCCCCCcCeeEEEE----EEeecCCCCCCCCCCcceeeeeCCCCCCcEEEee-cc
Q psy15251 306 VSEMITGVDLVQWQLMVASGQELPLKQEDLQLRGHSFET----RIYAENPYEGFLPGAGNLTHLRPPEHSDTIRIET-GV 380 (720)
Q Consensus 306 ~~e~~tGvdl~~~~l~~a~G~~l~~~~~~~~~~g~ai~~----ri~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d~-~v 380 (720)
++...+|+||++++++++.|+..+... . ...+.++.+ .-|+.++..+. .|..+.... .+++.+.. ++
T Consensus 301 ~i~~~~g~dl~~~~~~~~~G~l~~~~~-~-~~~~~a~~vv~a~~gyp~~~~~g~-----~i~~~~~~~-~~~~~~~~ag~ 372 (431)
T 3mjf_A 301 PIMLRMRSDLVELCLAGTQGKLNEKTS-D-WDERPSLGVVLAAGGYPADYRQGD-----VIHGLPQQE-VKDGKVFHAGT 372 (431)
T ss_dssp HHHHHBCSCHHHHHHHHHTTCGGGCCC-C-BCSSCEEEEEEEETTTTSCCCCCC-----BCBCCCSSC-BTTEEEEESSE
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCCCc-c-ccCCcEEEEEecCCCcCccCCCCC-----EeeCCcccc-CCCcEEEEeee
Confidence 344678999999999999997332210 0 123344433 33555554432 222221111 02333221 11
Q ss_pred --cCC-CeeCCCCCCceEEEEEEcCCHHHHHHHHHHHhhcceEecc--ccCHH
Q psy15251 381 --IEG-DEVSVHYDPMISKLVVWDENRTLALNKMKQALSQYQIAGL--DTNIN 428 (720)
Q Consensus 381 --~~G-~~v~~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G~--~tn~~ 428 (720)
..| ..+ ....+++.+++.|+|.++|.++++++++.+++.|. +++|.
T Consensus 373 ~~~~~~~~~--~~ggRv~~v~~~g~~~~~A~~~a~~~~~~i~~~~~~~r~dig 423 (431)
T 3mjf_A 373 KLNGNHEVV--TNGGRVLCVTALGETVAQAQQYAYQLAEGIQWEGVFCRKDIG 423 (431)
T ss_dssp EECTTSCEE--ECSSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEECCSCTT
T ss_pred EecCCCEEE--ecCCeEEEEEEecCCHHHHHHHHHHHhccCCCCCceeehhhH
Confidence 112 111 12355599999999999999999999999999994 55554
No 36
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=100.00 E-value=2.3e-38 Score=353.19 Aligned_cols=380 Identities=13% Similarity=0.121 Sum_probs=283.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
+..||||+|+|.....+++++++. ++..+.+.+. . .....+++.+.+ ++.|.+.|++++++.++|+|+
T Consensus 20 ~~m~ilvlG~ggre~ala~~l~~s~~v~~v~~~pg--n--~g~~~~~~~~~i-------~~~d~~~l~~~a~~~~id~vv 88 (442)
T 3lp8_A 20 GSMNVLVIGSGGREHSMLHHIRKSTLLNKLFIAPG--R--EGMSGLADIIDI-------DINSTIEVIQVCKKEKIELVV 88 (442)
T ss_dssp CCEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEEC--C--GGGTTTSEECCC-------CTTCHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCCEEEEECC--C--hHHhhccceeec-------CcCCHHHHHHHHHHhCCCEEE
Confidence 445899999998888999999877 4555555422 1 222234554433 678999999999999999999
Q ss_pred eCCCCCcccH---HHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEE
Q psy15251 86 PGYGFLSENA---EFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLM 162 (720)
Q Consensus 86 pg~g~lsE~~---~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~Pvv 162 (720)
|+. |++ .+++.+++.|++++||+++++++++||..+|++|+++|||+|++.. +++.+++.++++++|||+|
T Consensus 89 ~g~----E~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~--~~~~~ea~~~~~~~g~PvV 162 (442)
T 3lp8_A 89 IGP----ETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKYGY--FVDTNSAYKFIDKHKLPLV 162 (442)
T ss_dssp ECS----HHHHHTTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHHTCCBCCEEE--ESSHHHHHHHHHHSCSSEE
T ss_pred ECC----cHHHHHHHHHHHHhcCCcEecCCHHHHHHhhCHHHHHHHHHHCCCCCCCEEE--ECCHHHHHHHHHHcCCcEE
Confidence 864 444 3678899999999999999999999999999999999999999987 8899999999999999999
Q ss_pred EeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCC--CCcEEEeccccCCceEEEEEEEcccccEEEEEeeecccccc
Q psy15251 163 IKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFN--DSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQRR 240 (720)
Q Consensus 163 vKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~--~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~r~ 240 (720)
|||..|+||+|++++++.+|+.++++.+... ..|+ +..++|||||+ ++|+++.++.|+. +++.+.. .++
T Consensus 163 vKp~~~~gg~GV~iv~~~eel~~a~~~~~~~--~~~g~~~~~vlvEe~i~-G~E~sv~~~~dg~-~~~~~~~-----~~~ 233 (442)
T 3lp8_A 163 VKADGLAQGKGTVICHTHEEAYNAVDAMLVH--HKFGEAGCAIIIEEFLE-GKEISFFTLVDGS-NPVILGV-----AQD 233 (442)
T ss_dssp EEESSCCTTTSEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCC-SEEEEEEEEEESS-CEEEEEE-----EEE
T ss_pred EeECCCCCCCeEEEeCCHHHHHHHHHHHHhh--cccCCCCCeEEEEEeec-CcEEEEEEEECCC-eEEEeEE-----eEe
Confidence 9999999999999999999999999887631 2343 36899999999 5999999998763 4544332 111
Q ss_pred cee------------EEEEcCCCCCCHHHHHHHHHH----HHHHHHHcCC--cceeEEEEEEeCCCCcEEEEEecCCCC-
Q psy15251 241 HQK------------IIEEAPAPGISSEFRSRLGST----GVQVARAVRY--HNAGTVEFIMDPSSGEFYFMEMNTRLQ- 301 (720)
Q Consensus 241 ~~k------------~~e~~Pa~~l~~~~~~~l~~~----a~~i~~alg~--~G~~~vEf~~~~~~g~~~~iEiNpR~~- 301 (720)
|.+ ....+|++.++++..+++.+. +.++++++|+ +|++++||+++ ++| +||||+|||++
T Consensus 234 ~~~~~~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~a~~~~~a~g~~~~G~~~ve~~~~-~~g-~~viEiN~R~g~ 311 (442)
T 3lp8_A 234 YKTIGDNNKGPNTGGMGSYSKPNIITQEMEHIIIQKIIYPTIKAMFNMNIQFRGLLFAGIIIK-KNE-PKLLEYNVRFGD 311 (442)
T ss_dssp CCEEEGGGEEEECSCSEEEECTTSSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEE-TTE-EEEEEEESSCCT
T ss_pred eeecccCCCCCCCCCcEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEe-CCC-eEEEEEecCCCC
Confidence 221 145578877999999999887 8898899887 89999999999 677 99999999999
Q ss_pred cccccccccccCcHHHHHHHHHcCCCCCCCCCCCCcCeeEEEEE----EeecCCCCCCCCCCcceeeeeCCCCCCcEEEe
Q psy15251 302 VEHPVSEMITGVDLVQWQLMVASGQELPLKQEDLQLRGHSFETR----IYAENPYEGFLPGAGNLTHLRPPEHSDTIRIE 377 (720)
Q Consensus 302 ~~~~~~e~~tGvdl~~~~l~~a~G~~l~~~~~~~~~~g~ai~~r----i~ae~p~~~f~p~~g~i~~~~~p~~~~~vr~d 377 (720)
.++..+...++.||++.+++++.|+..+... ....+.++.+- -|+.++..+ ..|..+......+++.+.
T Consensus 312 ~~~~~~~~~~~~dl~~~~~~~~~G~l~~~~~--~~~~~~a~~vv~a~~gyp~~~~~g-----~~i~g~~~~~~~~~~~~~ 384 (442)
T 3lp8_A 312 PETQSILPRLNSDFLKLLSLTAKGKLGNESV--ELSKKAALCVVVASRGYPGEYKKN-----SIINGIENIEKLPNVQLL 384 (442)
T ss_dssp THHHHHGGGBCSCHHHHHHHHHHTCCSSCCC--CBCSCEEEEEEEEETTTTSSCCSS-----CEEBSHHHHHTCSSEEEE
T ss_pred CchhhhHHHhCCCHHHHHHHHHcCCCCCCCc--eeccCcEEEEEEccCCCCCCCCCC-----CEeeCCcccccCCCcEEE
Confidence 4577777778999999999999997433211 12233443222 233333222 122222110001233332
Q ss_pred e-cc--cCCCeeCCCCCCceEEEEEEcCCHHHHHHHHHHHhhcceEecc
Q psy15251 378 T-GV--IEGDEVSVHYDPMISKLVVWDENRTLALNKMKQALSQYQIAGL 423 (720)
Q Consensus 378 ~-~v--~~G~~v~~~~d~~~a~vi~~g~~~~ea~~~~~~al~~~~i~G~ 423 (720)
. +. ..|..+ ....+++.+++.|+|.++|+++++++++.+++.|.
T Consensus 385 ~ag~~~~~~~~~--~~ggRv~~v~~~g~~~~~A~~~a~~~~~~i~~~~~ 431 (442)
T 3lp8_A 385 HAGTRREGNNWV--SDSGRVINVVAQGENLASAKHQAYAALDLLDWPDG 431 (442)
T ss_dssp ESSEEEETTEEE--ECSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTE
T ss_pred EeeeeccCCeEE--ecCCeEEEEEEecCCHHHHHHHHHHHhcccCCCCC
Confidence 1 11 111111 22345599999999999999999999999999994
No 37
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=2.9e-37 Score=377.52 Aligned_cols=322 Identities=20% Similarity=0.269 Sum_probs=258.6
Q ss_pred CCCEEEEEcCcHH-----------HHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHH
Q psy15251 7 VLDSILIANRGEI-----------ACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDI 75 (720)
Q Consensus 7 ~~~~iLI~~~G~~-----------a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~ 75 (720)
+.+||||+|+|.+ ++.++++|+++|+++++++++++..+.+...+|+.+.. ..+.+.+.++
T Consensus 558 ~~~kVlVlG~G~~riG~~~Efd~~~~~~~~al~~~G~~vi~v~~np~~~s~~~~~ad~~~~~--------p~~~e~v~~i 629 (1073)
T 1a9x_A 558 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFE--------PVTLEDVLEI 629 (1073)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEECC--------CCSHHHHHHH
T ss_pred cCcEEEEecCCccccccccccchhHHHHHHHHHhcCCEEEEEecCCcccccccccccEEEec--------cchhhhhhhh
Confidence 5679999999985 46789999999999999988888777777789988742 2678999999
Q ss_pred HHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHH
Q psy15251 76 AVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAE 155 (720)
Q Consensus 76 a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~ 155 (720)
++..++|+|+|.+|... ...++..+++.|++++||+++++..+.||..++++|+++|||+|++.. +.+.+++.++++
T Consensus 630 ~~~e~~d~Vi~~~g~~~-~~~la~~Le~~Gi~i~G~~~~ai~~~~DK~~~~~ll~~~GIp~P~~~~--~~s~eea~~~~~ 706 (1073)
T 1a9x_A 630 VRIEKPKGVIVQYGGQT-PLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANAT--VTAIEMAVEKAK 706 (1073)
T ss_dssp HHHHCCSEEECSSSTHH-HHTTHHHHHHTTCCBCSSCHHHHHHHHSHHHHHHHHHHHTCCCCCEEE--CCSHHHHHHHHH
T ss_pred hhhcCcceEEeecCCch-HHHHHHHHHHCCCCeeCCCHHHHHHhhCHHHHHHHHHHcCcCCCCceE--ECCHHHHHHHHH
Confidence 99999999999887421 235678899999999999999999999999999999999999999987 899999999999
Q ss_pred HhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeec
Q psy15251 156 RIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDC 235 (720)
Q Consensus 156 ~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~ 235 (720)
++|||+||||..|+||+||++|++.+|+.++++.+... +++.+++||+||+|.+|+++++++|+++ ++...-.+
T Consensus 707 ~ig~PvvVKP~~~~gG~Gv~iv~~~~el~~~~~~a~~~----~~~~~vlvEefI~g~~E~~V~~l~d~~~-v~~~~i~e- 780 (1073)
T 1a9x_A 707 EIGYPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVSV----SNDAPVLLDHFLDDAVEVDVDAICDGEM-VLIGGIME- 780 (1073)
T ss_dssp HHCSSEEEEC-------CEEEECSHHHHHHHHHHCC------------EEEBCCTTCEEEEEEEEECSSC-EEEEEEEE-
T ss_pred HcCCCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHhh----CCCCcEEEEEccCCCcEEEEEEEEECCe-EEEEeeEE-
Confidence 99999999999999999999999999999998765432 2357899999999866999999998754 33222110
Q ss_pred ccccc--c-eeEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCccccccccccc
Q psy15251 236 SVQRR--H-QKIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITG 312 (720)
Q Consensus 236 s~~r~--~-~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tG 312 (720)
.+.+. | .......|++.++++..+++.+.+.++++++|++|.+++||+++ +|++||||+|||+++++++++.++|
T Consensus 781 ~~~~~g~~~gd~~~~~P~~~l~~~~~~~i~~~a~~i~~aLg~~G~~~vdf~v~--~~~~~viEvNpR~~~~~~~~~~~tG 858 (1073)
T 1a9x_A 781 HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVK--NNEVYLIEVNPRAARTVPFVSKATG 858 (1073)
T ss_dssp ESSCTTSCGGGCCEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC--SSCEEEEEEECSCCTTHHHHHHHHS
T ss_pred EEeccCCccCCceEEecCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEE--CCeEEEEEEECCCccHHHHHHHHHC
Confidence 11111 1 22344567668999999999999999999999999999999998 5779999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCC---CCCCCCCcCeeEEEEEEee
Q psy15251 313 VDLVQWQLMVASGQELP---LKQEDLQLRGHSFETRIYA 348 (720)
Q Consensus 313 vdl~~~~l~~a~G~~l~---~~~~~~~~~g~ai~~ri~a 348 (720)
+|++++++++++|.+++ +.+. ..+.++++.+++++
T Consensus 859 i~l~~~~~~~~~G~~l~~~~~~~~-~~~~~~~vk~~~~~ 896 (1073)
T 1a9x_A 859 VPLAKVAARVMAGKSLAEQGVTKE-VIPPYYSVKEVVLP 896 (1073)
T ss_dssp CCHHHHHHHHHTTCCHHHHTCCSC-CCCSSEEEEEEECG
T ss_pred cCHHHHHHHHHcCCCchhcccCcC-cCCCeEEEEeccCC
Confidence 99999999999999874 2222 23368888888763
No 38
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=100.00 E-value=1.1e-34 Score=311.63 Aligned_cols=291 Identities=14% Similarity=0.113 Sum_probs=212.3
Q ss_pred CEEEEEcCcHHHHHHHHHHHHc-C-CcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 9 DSILIANRGEIACRIMRTAKKM-G-IRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~-G-~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
+||||+|+|.. ..+++++++. | +++++++++++. ....++|+.+.++.. ++..+.+.+++++++.++|+|+|
T Consensus 5 ~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d~~~~~--~~~~~~d~~~~~~~~---~~~~~~~~l~~~~~~~~~d~vi~ 78 (331)
T 2pn1_A 5 PHLLITSAGRR-AKLVEYFVKEFKTGRVSTADCSPLA--SALYMADQHYIVPKI---DEVEYIDHLLTLCQDEGVTALLT 78 (331)
T ss_dssp CEEEEESCTTC-HHHHHHHHHHCCSSEEEEEESCTTC--GGGGGSSSEEECCCT---TSTTHHHHHHHHHHHHTCCEEEE
T ss_pred ceEEEecCCch-HHHHHHHHHhcCCCEEEEEeCCCcc--hhHHhhhceecCCCC---CChhHHHHHHHHHHHcCCCEEEe
Confidence 58999999876 6788999886 7 899888665554 345578988876421 22334789999999999999999
Q ss_pred CCCCCcc-cHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHH--HHhCCcEEE
Q psy15251 87 GYGFLSE-NAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQA--ERIGYPLMI 163 (720)
Q Consensus 87 g~g~lsE-~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~--~~ig~Pvvv 163 (720)
+++.... .+..++.++..|++++||+++++..++||..++++|+++|||+|+++. +.+++.+++ ++++||+|+
T Consensus 79 ~~~~~~~~~a~~~~~l~~~g~~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~----~~~~~~~~~~~~~~~~P~vv 154 (331)
T 2pn1_A 79 LIDPELGLLAQATERFQAIGVTVIVSPYAACELCFDKYTMYEYCLRQGIAHARTYA----TMASFEEALAAGEVQLPVFV 154 (331)
T ss_dssp SSHHHHHHHHHTHHHHHTTTCEECCCCHHHHHHHHBHHHHHHHHHHHTCCCCCEES----SHHHHHHHHHTTSSCSCEEE
T ss_pred CCchhHHHHHHHHHHHHhCCcEEecCCHHHHHHhhCHHHHHHHHHHcCCCCCcEEe----cHHHhhhhhhcccCCCCEEE
Confidence 8763211 123356677789999999999999999999999999999999999864 456776666 478999999
Q ss_pred eecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEc-ccccEEEEEeeeccccccce
Q psy15251 164 KAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGD-RYGNYVYLYERDCSVQRRHQ 242 (720)
Q Consensus 164 Kp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d-~~G~~v~~~~r~~s~~r~~~ 242 (720)
||..|+||+|++++++.+|+.++++. ..++++|+||+| +|+++.++.| .+|+++.++.+.+...+..
T Consensus 155 Kp~~g~g~~gv~~v~~~~el~~~~~~----------~~~~lvee~i~G-~e~~v~~~~d~~~G~~~~~~~~~~~~~~~g- 222 (331)
T 2pn1_A 155 KPRNGSASIEVRRVETVEEVEQLFSK----------NTDLIVQELLVG-QELGVDAYVDLISGKVTSIFIKEKLTMRAG- 222 (331)
T ss_dssp EESBC---------------------------------CEEEEECCCS-EEEEEEEEECTTTCCEEEEEEEEEEEEETT-
T ss_pred EeCCCCCCCCeEEeCCHHHHHHHHHh----------CCCeEEEecCCC-cEEEEEEEEecCCCeEEEEEEEEEEEecCC-
Confidence 99999999999999999999887653 358999999996 9999999998 7788887665544332222
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHH
Q psy15251 243 KIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMV 322 (720)
Q Consensus 243 k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~ 322 (720)
.. ...+. .. .+++.+.+.++++++||+|.+++||+.+ +|++||+|+|||+++..++ ...+|+|+++++++.
T Consensus 223 ~~-~~~~~-~~----~~~~~~~~~~~~~~lg~~G~~~vd~~~~--~g~~~~iEiN~R~~g~~~~-~~~~G~~~~~~~~~~ 293 (331)
T 2pn1_A 223 ET-DKSRS-VL----RDDVFELVEHVLDGSGLVGPLDFDLFDV--AGTLYLSEINPRFGGGYPH-AYECGVNFPAQLYRN 293 (331)
T ss_dssp EE-EEEEE-EC----CHHHHHHHHHHHTTTCCCEEEEEEEEEE--TTEEEEEEEESSCCTTHHH-HHHTTCCHHHHHHHH
T ss_pred ce-eEeEE-ec----cHHHHHHHHHHHHHhCCcceEEEEEEEc--CCCEEEEEEeCCCCCchHH-HHHcCCCHHHHHHHH
Confidence 11 11221 12 3678889999999999999999999966 6789999999999988764 667899999999999
Q ss_pred HcCCCCCC
Q psy15251 323 ASGQELPL 330 (720)
Q Consensus 323 a~G~~l~~ 330 (720)
++|.+++.
T Consensus 294 ~~g~~~~~ 301 (331)
T 2pn1_A 294 LMHEINVP 301 (331)
T ss_dssp HTTCCCCC
T ss_pred HcCCCCCc
Confidence 99998764
No 39
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=100.00 E-value=5.9e-36 Score=324.94 Aligned_cols=301 Identities=18% Similarity=0.180 Sum_probs=227.1
Q ss_pred CEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEE---------------EEeCCCCCcc
Q psy15251 9 DSILIANRGE---------IACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEA---------------YRLEGKSSLD 64 (720)
Q Consensus 9 ~~iLI~~~G~---------~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~---------------~~i~~~~~~~ 64 (720)
|||.|+-+|. .|..+++++++.||+++.++.+.+..+.+....++. ..+.+.....
T Consensus 4 kkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (357)
T 4fu0_A 4 KKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGITRSGEWYHYTGEKEKILNNTWFEDSKNLCPVVVSQNRSVK 83 (357)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTCCEEEECSCTHHHHTTCGGGCGGGEEEEEECCCTTTC
T ss_pred CEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEEeCCCceeecCCCHHHhhcCcchhhhhcccccccccccccc
Confidence 5787774442 266799999999999999987776544332211111 1111111100
Q ss_pred cccCHHHHHHHHHHcCCCEEEeC-CCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCC
Q psy15251 65 TYLNQAKILDIAVRSQCQAIHPG-YGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGE 143 (720)
Q Consensus 65 ~~~~~~~i~~~a~~~~~daI~pg-~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~ 143 (720)
.. .+...+..+..++|+++|. +|++.|+..++.+|+.+|+||+||++.++.++.||..+|++++++|||+|++..
T Consensus 84 ~~--~~~~~~~~~~~~~D~vf~~l~G~~gEdg~~q~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~-- 159 (357)
T 4fu0_A 84 GF--LEIASDKYRIIKVDLVFPVLHGKNGEDGTLQGIFELAGIPVVGCDTLSSALCMDKDRAHKLVSLAGISVPKSVT-- 159 (357)
T ss_dssp EE--EEC----CEEEECSEEEECCCSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCBCCCEEE--
T ss_pred ch--hhhhhhhHhhcCCCEEEECCcCccccCHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHCCCCCCCEEe--
Confidence 00 1123345566779999998 688999999999999999999999999999999999999999999999999875
Q ss_pred CCC---HHHHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEE
Q psy15251 144 DQN---EEILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQII 220 (720)
Q Consensus 144 ~~s---~~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~ 220 (720)
+.+ ...+.++++++|||+||||..|+||+||++|++.+||.++++.+.. .+..+++|+||+ ++|+++.++
T Consensus 160 ~~~~~~~~~~~~~~~~lg~PvvVKP~~gg~s~Gv~~v~~~~el~~~~~~a~~------~~~~vlvE~~i~-G~e~~v~vl 232 (357)
T 4fu0_A 160 FKRFNEEAAMKEIEANLTYPLFIKPVRAGSSFGITKVIEKQELDAAIELAFE------HDTEVIVEETIN-GFEVGCAVL 232 (357)
T ss_dssp EEGGGHHHHHHHHHHHCCSSEEEEETTCSSSTTCEEESSHHHHHHHHHHHTT------TCSEEEEEECCC-SEEEEEEEE
T ss_pred ecCCChHHHHHHHHHhcCCCEEEEECCCCCCCceEEeccHHhHHHHHHHHhc------cCCeEEEEEecC-CEEEEEEEE
Confidence 333 3345667788999999999999999999999999999999887653 267999999999 599999999
Q ss_pred EcccccEEEEE--eeeccccccceeE-----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEE
Q psy15251 221 GDRYGNYVYLY--ERDCSVQRRHQKI-----IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYF 293 (720)
Q Consensus 221 ~d~~G~~v~~~--~r~~s~~r~~~k~-----~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~ 293 (720)
+++.+.+..+. ...+...++.+|. ....|+ .++++..+++.+.|.+++++||++|.++|||+++ ++|++||
T Consensus 233 ~~~~~~~~~v~~~~~~~~~~d~~~k~~~~~~~~~~pa-~l~~~~~~~i~~~A~~~~~aLg~~G~~~VDf~~~-~dg~~~v 310 (357)
T 4fu0_A 233 GIDELIVGRVDEIELSSGFFDYTEKYTLKSSKIYMPA-RIDAEAEKRIQEAAVTIYKALGCSGFSRVDMFYT-PSGEIVF 310 (357)
T ss_dssp ESSSEEECCCEEEEECHHHHTSCSBCSSCCEEEESSC-SCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-TTCCEEE
T ss_pred ecCCceEEEEEEEEcccccccccccccCCCceEecCC-CCCHHHHHHHHHHHHHHHHHhCCcceEEEEEEEe-CCCCEEE
Confidence 98755443332 2334444444432 334566 6999999999999999999999999999999999 7899999
Q ss_pred EEecCCCCcc----cccccccccCcHHHHHHHH
Q psy15251 294 MEMNTRLQVE----HPVSEMITGVDLVQWQLMV 322 (720)
Q Consensus 294 iEiNpR~~~~----~~~~e~~tGvdl~~~~l~~ 322 (720)
+|||||+|.+ .|..-.++|+|+.++.-++
T Consensus 311 lEvNt~PG~t~~S~~p~~~~~~G~~~~~li~~l 343 (357)
T 4fu0_A 311 NEVNTIPGFTSHSRYPNMMKGIGLSFSQMLDKL 343 (357)
T ss_dssp EEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHH
T ss_pred EEEeCCCCCCcccHHHHHHHHhCcCHHHHHHHH
Confidence 9999999844 2333346799887654443
No 40
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=100.00 E-value=4.7e-33 Score=297.34 Aligned_cols=278 Identities=18% Similarity=0.219 Sum_probs=217.0
Q ss_pred CCCCEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHH
Q psy15251 6 CVLDSILIANRGE---------IACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIA 76 (720)
Q Consensus 6 ~~~~~iLI~~~G~---------~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a 76 (720)
.|++||+|+.+|. .+..+++++++.|++++.+++... . .. ..
T Consensus 11 ~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~-~----------------------~~------~l 61 (317)
T 4eg0_A 11 KRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAER-P----------------------LS------AL 61 (317)
T ss_dssp GGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS-C----------------------TT------HH
T ss_pred hhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCc-h----------------------HH------Hh
Confidence 3567888887764 488999999999999999963211 0 00 12
Q ss_pred HHcCCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHH-
Q psy15251 77 VRSQCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQA- 154 (720)
Q Consensus 77 ~~~~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~- 154 (720)
++.++|.++|.. |...|+..++.+++..|++++|++++++..+.||..+|++|+++|||+|++.. +.+.+++.+++
T Consensus 62 ~~~~~D~v~~~~hg~~ge~~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~--~~~~~~~~~~~~ 139 (317)
T 4eg0_A 62 KDEGFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPPFET--VMRGDDYAARAT 139 (317)
T ss_dssp HHTTCCEEEECCCSGGGTSSHHHHHHHHHTCEESSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEE--EETTSCHHHHHH
T ss_pred hhcCCCEEEEcCCCCCCchHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEEE--EECchhHHHHHH
Confidence 456899999875 34458889999999999999999999999999999999999999999999987 66666666666
Q ss_pred ---HHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEE
Q psy15251 155 ---ERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLY 231 (720)
Q Consensus 155 ---~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~ 231 (720)
+++|||+||||..|+||+|++++++.+|+.++++.+.. .+..++||+||+.++|+++.+++|..+.++.+.
T Consensus 140 ~~~~~~g~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~i~~G~E~~v~vl~~~~~~~~~i~ 213 (317)
T 4eg0_A 140 DIVAKLGLPLFVKPASEGSSVAVLKVKTADALPAALSEAAT------HDKIVIVEKSIEGGGEYTACIAGDLDLPLIKIV 213 (317)
T ss_dssp HHHHHHCSCEEEEECC-----CCEEECSGGGHHHHHHHHTT------TCSEEEEEECCCSSEEEEEEEETTCCCCCEEEE
T ss_pred HHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------CCCeEEEEcCCCCCcEEEEEEECCcccceEEEe
Confidence 78999999999999999999999999999999887542 267899999999559999999988666555544
Q ss_pred eeeccccccce-----eEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcc---
Q psy15251 232 ERDCSVQRRHQ-----KIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE--- 303 (720)
Q Consensus 232 ~r~~s~~r~~~-----k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~--- 303 (720)
..+ ....... ......|+ .++++..+++.+.+.++++++|++|.+++||+++ ++|++||+|+|||++.+
T Consensus 214 ~~~-~~~~~~~k~~~g~~~~~~P~-~l~~~~~~~l~~~a~~~~~~lg~~G~~~vD~~~~-~~g~~~vlEiN~~pg~t~~s 290 (317)
T 4eg0_A 214 PAG-EFYDYHAKYVANDTQYLIPC-GLPAEQETELKRIARRAFDVLGCTDWGRADFMLD-AAGNAYFLEVNTAPGMTDHS 290 (317)
T ss_dssp C----------------CEEESSC-SSCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEEC-TTCCEEEEEEESSCCCSTTS
T ss_pred eCC-ceechhhcccCCCeeEEcCC-CCCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEe-CCCCEEEEEeeCCCCCCccc
Confidence 321 1111111 22356787 5899999999999999999999999999999999 78899999999999843
Q ss_pred -cccccccccCcHHHHHHHHH
Q psy15251 304 -HPVSEMITGVDLVQWQLMVA 323 (720)
Q Consensus 304 -~~~~e~~tGvdl~~~~l~~a 323 (720)
.|..-..+|+|+.+...++.
T Consensus 291 ~~p~~~~~~G~~~~~l~~~li 311 (317)
T 4eg0_A 291 LPPKAARSIGIGYSELVVKVL 311 (317)
T ss_dssp HHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHH
Confidence 23333467999998887764
No 41
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=100.00 E-value=1.3e-32 Score=300.87 Aligned_cols=301 Identities=14% Similarity=0.142 Sum_probs=227.9
Q ss_pred CEEEEEcCc---H------HHHHHHHHH-HHcCCcEEEEeeCCCCCCccc-------------ccc-cEEEEeCCCCCcc
Q psy15251 9 DSILIANRG---E------IACRIMRTA-KKMGIRVVSVYSDIDADALHV-------------KMA-DEAYRLEGKSSLD 64 (720)
Q Consensus 9 ~~iLI~~~G---~------~a~~iira~-~~~G~~~v~v~s~~d~~~~~~-------------~~a-D~~~~i~~~~~~~ 64 (720)
+||+|+.+| | .+..+++++ ++.||+++.++.+++...... .+. +.. +.....
T Consensus 4 ~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 79 (377)
T 1ehi_A 4 KRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQNGFFLDTESSKKILALEDEQPIVDAFM----KTVDAS 79 (377)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEECTTSCBCCHHHHHHHHTTCCHHHHHHHHH----TSCCTT
T ss_pred cEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEcCCCCEEecccccccccccchhhhccccc----cccccc
Confidence 378888766 2 378899999 999999999987765533210 011 000 000000
Q ss_pred cccCHHHHHHHHHHcCCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCC
Q psy15251 65 TYLNQAKILDIAVRSQCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGE 143 (720)
Q Consensus 65 ~~~~~~~i~~~a~~~~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~ 143 (720)
.+.+...++. +..++|+|+|.. |...|+..++.+++..|++++|++++++..+.||..+|++|+++|||+|++..
T Consensus 80 ~~~~~~~~~~--~~~~~D~v~~~~~g~~gedg~~~~lle~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~-- 155 (377)
T 1ehi_A 80 DPLARIHALK--SAGDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKYIV-- 155 (377)
T ss_dssp CTTCTTGGGG--TTCCCSEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHTTTCCCCCEEE--
T ss_pred cccCcchhhc--cccCCCEEEEecCCCCCcCHHHHHHHHHcCCCEeCcCHHHHHHHcCHHHHHHHHHHcCCCCCCEEE--
Confidence 0111101111 235799999997 66778888899999999999999999999999999999999999999999987
Q ss_pred CCCHHH----HHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEE
Q psy15251 144 DQNEEI----LMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQI 219 (720)
Q Consensus 144 ~~s~~e----~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v 219 (720)
+.+.++ +.++++++|||+||||..|+||+||.+|++.+|+..+++.+.. .+..++||+||+|.+|+++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~g~PvvVKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~vlvEe~I~G~~E~~v~v 229 (377)
T 1ehi_A 156 VDPESANNWSWDKIVAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQ------YDYKVLIEEAVNGARELEVGV 229 (377)
T ss_dssp ECTTGGGGCCHHHHHHHHCSCEEEEESSCCTTTTEEEECSHHHHHHHHHHHTT------TCSCEEEEECCCCSCEEEEEE
T ss_pred EeccccchHHHHHHHHhcCCCEEEEeCCCCCCcCEEEeCCHHHHHHHHHHHHh------cCCcEEEEcCCCCCceEEEEE
Confidence 555544 6667788999999999999999999999999999999887543 157899999999659999999
Q ss_pred EEcccccEEEEEeeecc-------ccccce------eEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC
Q psy15251 220 IGDRYGNYVYLYERDCS-------VQRRHQ------KIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDP 286 (720)
Q Consensus 220 ~~d~~G~~v~~~~r~~s-------~~r~~~------k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~ 286 (720)
++++++.++.+.++.+. ...... ......|+ .++++..+++.+.+.++++++|++|.+++||+++
T Consensus 230 l~~~~~~~~~~~ei~~~~~~~~~~~~d~~~k~~~g~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~- 307 (377)
T 1ehi_A 230 IGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFQIPA-QLSPEVTKEVKQMALDAYKVLNLRGEARMDFLLD- 307 (377)
T ss_dssp EESSSCEEEEEEEEECTTSSSSSCCCCHHHHTTCCTTCEEESSC-CCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-
T ss_pred EcCCCcEEEeeEEEEecCCCCcCceeCHHhcccCCCCeeEEeCC-CCCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEe-
Confidence 99866566666655441 111111 23456788 4999999999999999999999999999999999
Q ss_pred CCCcEEEEEecCCCCcc-c---ccccccccCcHHH---HHHHHHcC
Q psy15251 287 SSGEFYFMEMNTRLQVE-H---PVSEMITGVDLVQ---WQLMVASG 325 (720)
Q Consensus 287 ~~g~~~~iEiNpR~~~~-~---~~~e~~tGvdl~~---~~l~~a~G 325 (720)
++|++||+|||||++.. + |....++|+|+.+ .+++.+++
T Consensus 308 ~~g~~~vlEiN~rpg~t~~s~~p~~~~a~G~~~~~l~~~li~~al~ 353 (377)
T 1ehi_A 308 ENNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDMLIDYGFE 353 (377)
T ss_dssp TTCCEEEEEEESSCCCSTTCGGGTGGGGGTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCCCCcccHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 77899999999999854 2 4334478999954 45555554
No 42
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=100.00 E-value=1.8e-33 Score=307.92 Aligned_cols=300 Identities=19% Similarity=0.174 Sum_probs=225.8
Q ss_pred CEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEeeCCCCCCccccccc-----------------EEEEeCCCCC
Q psy15251 9 DSILIANRGE---------IACRIMRTAKKMGIRVVSVYSDIDADALHVKMAD-----------------EAYRLEGKSS 62 (720)
Q Consensus 9 ~~iLI~~~G~---------~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD-----------------~~~~i~~~~~ 62 (720)
+||.|+-+|. .|..+++++++.||+++.++.+.+..+......+ ..+.+.+...
T Consensus 23 ~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (386)
T 3e5n_A 23 IRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQGQWHVNDPDSFLLHADDPARIALHRSGRGVALLPGAQ 102 (386)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEECGGGSEESTTCTTTCEECCCCCCEEECTTCS
T ss_pred ceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEECCCCCEEecccchhhccccccccccccccccceeeccCcc
Confidence 4676665442 2678999999999999999877654322111100 0111111111
Q ss_pred cccccCHHHHHHHHHHcCCCEEEeC-CCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCccc
Q psy15251 63 LDTYLNQAKILDIAVRSQCQAIHPG-YGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYH 141 (720)
Q Consensus 63 ~~~~~~~~~i~~~a~~~~~daI~pg-~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~ 141 (720)
...+.... ......++|+|+|. +|...|+..++.+++.+|+|++|+++.++..+.||..+|++++++|||+|++..
T Consensus 103 ~~~~~~~~---~~~~~~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~~ 179 (386)
T 3e5n_A 103 QQQLRPIQ---PEQALAQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVAPFVC 179 (386)
T ss_dssp SSCEEECC-----CCCCCCSEEEEEECSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHBHHHHHHHHHHTTCCBCCEEE
T ss_pred ccceeccc---cccccCCCCEEEEcCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCCCCEEE
Confidence 11111000 01124579999999 688889999999999999999999999999999999999999999999999987
Q ss_pred CCCCCHH----HHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEE
Q psy15251 142 GEDQNEE----ILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEV 217 (720)
Q Consensus 142 ~~~~s~~----e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v 217 (720)
+.+.+ ++.++++++|||+||||..|+||+|+++|++.+|+.++++.+.. .+..++||+||+| +|++|
T Consensus 180 --~~~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~------~~~~vlVEe~I~G-~E~~v 250 (386)
T 3e5n_A 180 --FDRHTAAHADVDTLIAQLGLPLFVKPANQGSSVGVSQVRTADAFAAALALALA------YDHKVLVEAAVAG-REIEC 250 (386)
T ss_dssp --EEHHHHTTCCHHHHHHHHCSSEEEEESBSCSSTTCEEECSGGGHHHHHHHHTT------TCSEEEEEECCCS-EEEEE
T ss_pred --EeCcccchhhHHHHHHhcCCCEEEEECCCCcCCCEEEECCHHHHHHHHHHHHh------CCCcEEEEcCCCC-eEEEE
Confidence 66666 67788889999999999999999999999999999999987653 2678999999995 99999
Q ss_pred EEEEcccccEEEEEeeecc--ccccceeE------EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCC
Q psy15251 218 QIIGDRYGNYVYLYERDCS--VQRRHQKI------IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSG 289 (720)
Q Consensus 218 ~v~~d~~G~~v~~~~r~~s--~~r~~~k~------~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g 289 (720)
.++.++...++..++..+. ......+. ....|+ .++++..+++.+.+.++++++|++|.+++||+++ ++|
T Consensus 251 ~vl~~~~~~~~~~gei~~~~~~~d~~~ky~~~~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~-~dg 328 (386)
T 3e5n_A 251 AVLGNAVPHASVCGEVVVHDAFYSYATKYISEHGAEIVIPA-DIDAQTQQRIQQIAVQAYQALGCAGMARVDVFLC-ADG 328 (386)
T ss_dssp EEECSSSCEEEEEEEECC-----------------CEESSC-SSCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEC-TTC
T ss_pred EEEeCCCceEEEeEEEEeCCcccchhcccCCCCCeEEEECC-CCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEE-CCC
Confidence 9999876566655555443 12222232 234587 5999999999999999999999999999999999 778
Q ss_pred cEEEEEecCCCCcc----cccccccccCcHHHHHHHH
Q psy15251 290 EFYFMEMNTRLQVE----HPVSEMITGVDLVQWQLMV 322 (720)
Q Consensus 290 ~~~~iEiNpR~~~~----~~~~e~~tGvdl~~~~l~~ 322 (720)
++||+|+|||++.+ .|..-.++|+|+.++..++
T Consensus 329 ~~~vlEiN~~PG~t~~S~~p~~~~~~Gi~~~~li~~l 365 (386)
T 3e5n_A 329 RIVINEVNTLPGFTRISVYPKLWQASGLDYRGLITRL 365 (386)
T ss_dssp CEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHH
T ss_pred cEEEEEeECCCCCCccCHHHHHHHHhCCCHHHHHHHH
Confidence 99999999999843 2333446799998776544
No 43
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=100.00 E-value=4.7e-32 Score=294.98 Aligned_cols=289 Identities=19% Similarity=0.198 Sum_probs=220.5
Q ss_pred HHHHHHHHHHcCCcEEEEeeCCCCCCccccccc-----------------EEEEeCCCCCcccccCHHHHHHHHHHcCCC
Q psy15251 20 ACRIMRTAKKMGIRVVSVYSDIDADALHVKMAD-----------------EAYRLEGKSSLDTYLNQAKILDIAVRSQCQ 82 (720)
Q Consensus 20 a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD-----------------~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d 82 (720)
|..+++++++.||+++.++.+.+..+......+ ..+.+.+.......... .......++|
T Consensus 24 ~~~v~~al~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D 100 (364)
T 3i12_A 24 AKNIVDAIDKTRFDVVLLGIDKAGQWHVNDAENYLQNADDPAHIALRPSAISLAQVPGKHQHQLINA---QNGQPLPTVD 100 (364)
T ss_dssp HHHHHHHSCTTTEEEEEEEECTTSCEEEECSSSSBSSTTCTTTCCBCCCSCBEEECTTCSSSCEEET---TTCCBCCCCS
T ss_pred HHHHHHHHhhcCCeEEEEEECCCCCEEecccchhhhccccccccccccccccceecccccccceecc---ccccccCCCC
Confidence 668999999999999999876554322111100 00111111110000000 0001135799
Q ss_pred EEEeC-CCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHH----HHHHHHHHh
Q psy15251 83 AIHPG-YGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEE----ILMEQAERI 157 (720)
Q Consensus 83 aI~pg-~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~----e~~~~~~~i 157 (720)
+|+|. +|...|+..++.+++.+|+|++|++..++..+.||..+|++++++|||+|++.. +.+.+ ++.++++++
T Consensus 101 ~vf~~lhG~~gEdg~iq~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~--~~~~~~~~~~~~~~~~~l 178 (364)
T 3i12_A 101 VIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFIT--LTRTNRHAFSFAEVESRL 178 (364)
T ss_dssp EEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEE--EETTTGGGCCHHHHHHHH
T ss_pred EEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHHCHHHHHHHHHHCCCCCCCEEE--EEccccchhhHHHHHHhc
Confidence 99999 688889999999999999999999999999999999999999999999999987 66655 777888899
Q ss_pred CCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeee---
Q psy15251 158 GYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERD--- 234 (720)
Q Consensus 158 g~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~--- 234 (720)
|||+||||..|++|+|+++|++.+|+.++++.+... +..++||+||+| +|+++.++.++.+.+..+++..
T Consensus 179 g~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~~------~~~vlVEe~I~G-~E~~v~vl~~~~~~~~~~~ei~~~~ 251 (364)
T 3i12_A 179 GLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEF------DHKVVVEQGIKG-REIECAVLGNDNPQASTCGEIVLNS 251 (364)
T ss_dssp CSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEEEEEEESSSCEEEEEEEEECCT
T ss_pred CCCEEEEECCCCCCcCeEEeCCHHHHHHHHHHHHhc------CCcEEEEcCcCC-eEEEEEEEeCCCceEeeeEEEecCC
Confidence 999999999999999999999999999999887653 679999999996 9999999998764455544421
Q ss_pred c--cccccc--ee-EEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcc----cc
Q psy15251 235 C--SVQRRH--QK-IIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE----HP 305 (720)
Q Consensus 235 ~--s~~r~~--~k-~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~----~~ 305 (720)
+ .+...+ .. .....|+ .++++..+++.+.+.++++++|++|.+++||+++ ++|++||+|+|+|++.+ .|
T Consensus 252 ~~~~~~~ky~~~~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~-~~g~~~vlEiN~~Pg~t~~s~~p 329 (364)
T 3i12_A 252 EFYAYDTKYIDDNGAQVVVPA-QIPSEVNDKIRAIAIQAYQTLGCAGMARVDVFLT-ADNEVVINEINTLPGFTNISMYP 329 (364)
T ss_dssp TCC--TTTTSGGGGCEEESSC-SSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-TTCCEEEEEEESSCCCSTTCHHH
T ss_pred CccCHHHcccCCCceEEEeCC-CCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEe-cCCCEEEEEeeCCCCCCCCCHHH
Confidence 1 111111 11 4556788 4999999999999999999999999999999999 78999999999999843 24
Q ss_pred cccccccCcHHHHHHHH
Q psy15251 306 VSEMITGVDLVQWQLMV 322 (720)
Q Consensus 306 ~~e~~tGvdl~~~~l~~ 322 (720)
....++|+|+.+...++
T Consensus 330 ~~~~a~G~~~~~l~~~l 346 (364)
T 3i12_A 330 KLWQASGLGYTDLISRL 346 (364)
T ss_dssp HHHHTTTCCHHHHHHHH
T ss_pred HHHHHhCcCHHHHHHHH
Confidence 44456799988866544
No 44
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=100.00 E-value=1.1e-32 Score=300.23 Aligned_cols=299 Identities=18% Similarity=0.240 Sum_probs=221.2
Q ss_pred CEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEeeCCCCCCccccc----cc--EEEEeCCCCCcccccCHHHHH
Q psy15251 9 DSILIANRGE---------IACRIMRTAKKMGIRVVSVYSDIDADALHVKM----AD--EAYRLEGKSSLDTYLNQAKIL 73 (720)
Q Consensus 9 ~~iLI~~~G~---------~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~----aD--~~~~i~~~~~~~~~~~~~~i~ 73 (720)
+||+|+.+|. .+..+++++++.||+++.++.+++..+..... ++ ..+.++ .+....+ +.++
T Consensus 4 ~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~ 79 (364)
T 2i87_A 4 ENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIKSTDELHLE-NGEALEI---SQLL 79 (364)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEECTTCCEEEECCCCSCCCSGGGSCGG-GSEEECS---SGGG
T ss_pred cEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEcCCCCEEeccccccccccchhhccc-ccccccc---cccc
Confidence 4778877663 47889999999999999998776543221100 00 000000 0000001 1111
Q ss_pred HH-HHHcCCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHH---
Q psy15251 74 DI-AVRSQCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEE--- 148 (720)
Q Consensus 74 ~~-a~~~~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~--- 148 (720)
.. .+..++|+|+|.. |...|+..++.+++..|++++|++.+++..+.||..++++|+++|||+|++.. +.+.+
T Consensus 80 ~~~~~~~~~D~v~~~~~g~~~ed~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~--~~~~~~~~ 157 (364)
T 2i87_A 80 KESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYIS--FLRSEYEK 157 (364)
T ss_dssp GBCTTSSBCSEEEEECCCSSSCTTHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHHTCCCCCEEE--EEHHHHHH
T ss_pred cccccccCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCEEE--Eechhhcc
Confidence 10 1356799999987 67778888899999999999999999999999999999999999999999986 55554
Q ss_pred ----HHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEccc
Q psy15251 149 ----ILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRY 224 (720)
Q Consensus 149 ----e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~ 224 (720)
++.++++++|||+||||..|+||+||++|++.+|+..+++.+.. .+..++||+||+| +|+++.++++++
T Consensus 158 ~~~~~~~~~~~~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~I~G-~E~~v~vl~~~~ 230 (364)
T 2i87_A 158 YEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQ------FDRKLVIEQGVNA-REIEVAVLGNDY 230 (364)
T ss_dssp HHHHHHHHHHHHCCSSEEEEESSCSSCTTCEEESSHHHHHHHHHHHHT------TCSEEEEEECCCC-EEEEEEEEESSS
T ss_pred cchhHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------cCCeEEEEeCccC-eEEEEEEEcCCC
Confidence 46667788999999999999999999999999999999887653 2679999999995 999999999865
Q ss_pred ccEEEEEeeec--cccccceeE-----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEec
Q psy15251 225 GNYVYLYERDC--SVQRRHQKI-----IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMN 297 (720)
Q Consensus 225 G~~v~~~~r~~--s~~r~~~k~-----~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN 297 (720)
+.++..++..+ .......+. ....|+ .++++..+++.+.+.++++++|++|.+++||+++ ++|++||+|+|
T Consensus 231 ~~~~~~~e~~~~~~~~~~~~k~~~g~~~~~~pa-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~-~~g~~~viEiN 308 (364)
T 2i87_A 231 PEATWPGEVVKDVAFYDYKSKYKDGKVQLQIPA-DLDEDVQLTLRNMALEAFKATDCSGLVRADFFVT-EDNQIYINETN 308 (364)
T ss_dssp CEECCCEEECCSCCC-----------CCEESSC-SSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-TTCCEEEEEEE
T ss_pred cEEeeeEEEecCCCcCCHHHcccCCCeeEEeCC-CCCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEe-cCCCEEEEEEe
Confidence 44443343321 111222222 234687 4899999999999999999999999999999999 78899999999
Q ss_pred CCCCcc-c---ccccccccCcHHHHHHHH
Q psy15251 298 TRLQVE-H---PVSEMITGVDLVQWQLMV 322 (720)
Q Consensus 298 pR~~~~-~---~~~e~~tGvdl~~~~l~~ 322 (720)
||++.. . |....++|+|+.++..++
T Consensus 309 ~rpg~t~~s~~p~~~~~~G~~~~~l~~~l 337 (364)
T 2i87_A 309 AMPGFTAFSMYPKLWENMGLSYPELITKL 337 (364)
T ss_dssp SSCCCSTTSHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCCCchhHHHHHHHHhCCCHHHHHHHH
Confidence 999864 2 333346799987664443
No 45
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=100.00 E-value=1.2e-31 Score=284.44 Aligned_cols=272 Identities=21% Similarity=0.292 Sum_probs=215.4
Q ss_pred CCEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHH
Q psy15251 8 LDSILIANRGE---------IACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVR 78 (720)
Q Consensus 8 ~~~iLI~~~G~---------~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~ 78 (720)
++||+|+++|. .+..++++++++|++++.++.+ +... .. +..
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~-~~~~--~~--------------------------~~~ 52 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK-EVDV--TQ--------------------------LKS 52 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT-TSCG--GG--------------------------TTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC-chHH--HH--------------------------hhc
Confidence 35899999886 6789999999999999998544 2111 00 012
Q ss_pred cCCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHH-----
Q psy15251 79 SQCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILME----- 152 (720)
Q Consensus 79 ~~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~----- 152 (720)
.++|+|++.. +...|+..+...++..|++++||+++++..+.||..++++++++|||+|++.. +.+. ++.+
T Consensus 53 ~~~d~v~~~~~~~~~e~~~~~~~~e~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gi~~p~~~~--~~~~-~~~~~~~~~ 129 (306)
T 1iow_A 53 MGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVA--LTRA-EFEKGLSDK 129 (306)
T ss_dssp TTEEEEEECCCSTTTSSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEE--EEHH-HHHHCCCTH
T ss_pred cCCCEEEEcCCCCCCcchHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCeEE--Echh-hhhccchhh
Confidence 4678888765 33346667788899999999999999999999999999999999999999986 6666 6666
Q ss_pred ---HHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEE
Q psy15251 153 ---QAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVY 229 (720)
Q Consensus 153 ---~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~ 229 (720)
++++++||+|+||..|+||+|++++++.+|+.++++.+.. + +..+++|+||+ ++|+++.++. |+++.
T Consensus 130 ~~~~~~~~~~p~vvKP~~g~~~~gv~~v~~~~el~~~~~~~~~-----~-~~~~lvee~i~-g~e~~v~~~~---g~~~~ 199 (306)
T 1iow_A 130 QLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQ-----H-DEEVLIEKWLS-GPEFTVAILG---EEILP 199 (306)
T ss_dssp HHHHHHTTCSSEEEEETTCCTTTTCEEESSGGGHHHHHHHHTT-----T-CSEEEEEECCC-CCEEEEEEET---TEECC
T ss_pred hhhHHhccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh-----h-CCCEEEEeCcC-CEEEEEEEEC---CCccc
Confidence 6788999999999999999999999999999998876542 1 57999999999 5899999993 34444
Q ss_pred EEeeec-----ccccc--ceeEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCc
Q psy15251 230 LYERDC-----SVQRR--HQKIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQV 302 (720)
Q Consensus 230 ~~~r~~-----s~~r~--~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~ 302 (720)
+.++.. ..... ........|+ .++++..+++.+.+.++++++|++|.+++||+++ ++|++||+|+|||++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~g~~~~~~p~-~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~-~~g~~~~iEiN~rpg~ 277 (306)
T 1iow_A 200 SIRIQPSGTFYDYEAKFLSDETQYFCPA-GLEASQEANLQALVLKAWTTLGCKGWGRIDVMLD-SDGQFYLLEANTSPGM 277 (306)
T ss_dssp CEEEECSSSSSCHHHHHTCSCCEEESSC-CCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEC-TTSCEEEEEEESSCCC
T ss_pred eEEEEeCCCeEchhheecCCCeeEEcCC-CCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEc-CCCCEEEEEecCCCCC
Confidence 333210 11000 1233456787 5889999999999999999999999999999999 7889999999999986
Q ss_pred c-c---ccccccccCcHHHHHHHHH
Q psy15251 303 E-H---PVSEMITGVDLVQWQLMVA 323 (720)
Q Consensus 303 ~-~---~~~e~~tGvdl~~~~l~~a 323 (720)
. + |.....+|+|+.++++++.
T Consensus 278 ~~~s~~p~~~~~~G~~~~~~~~~~~ 302 (306)
T 1iow_A 278 TSHSLVPMAARQAGMSFSQLVVRIL 302 (306)
T ss_dssp STTCHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHcCCCHHHHHHHHH
Confidence 4 2 3345567999999998875
No 46
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=100.00 E-value=1.1e-31 Score=292.85 Aligned_cols=298 Identities=18% Similarity=0.260 Sum_probs=213.7
Q ss_pred CEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEeeCCCCCCcccc-cccEEE---EeCCCCCc--ccccCHHHHH
Q psy15251 9 DSILIANRGE---------IACRIMRTAKKMGIRVVSVYSDIDADALHVK-MADEAY---RLEGKSSL--DTYLNQAKIL 73 (720)
Q Consensus 9 ~~iLI~~~G~---------~a~~iira~~~~G~~~v~v~s~~d~~~~~~~-~aD~~~---~i~~~~~~--~~~~~~~~i~ 73 (720)
+||.|+-+|. .|..|++++++.||+++.++.+.+....... ..+... .+...... ....+...++
T Consensus 38 ~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (383)
T 3k3p_A 38 ETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAGDFIKTQEFDSQPSETDKLMTNDTIIASQKIKPSDIY 117 (383)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEEEEESSCCC--CCCCCTTSCCGGGEECGGGGC
T ss_pred CeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEecCCCCEEecccccccccccccccccccccccccccccccc
Confidence 3677775542 4888999999999999999876554332110 000000 00000000 0000000010
Q ss_pred HHHHHcCCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCC-CCCCCcccCCCCCH----
Q psy15251 74 DIAVRSQCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAE-VPVIPGYHGEDQNE---- 147 (720)
Q Consensus 74 ~~a~~~~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~G-vp~p~~~~~~~~s~---- 147 (720)
.++|.|+|.. |...|+..++.+++.+|+|++|++..++..+.||..+|++++++| ||+|++.. +.+.
T Consensus 118 -----~~~D~vf~~lhG~~GEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~G~Ipvp~~~~--~~~~~~~~ 190 (383)
T 3k3p_A 118 -----EEEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQVAYVA--LIEGEPLE 190 (383)
T ss_dssp -----CTTCEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHHCCCCBCCEEE--EETTSCHH
T ss_pred -----cCCCEEEEcCCCCCcchHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHhCCCcCCCCEEE--EeCccchh
Confidence 3789999976 556689999999999999999999999999999999999999999 99999986 4443
Q ss_pred HHHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccE
Q psy15251 148 EILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNY 227 (720)
Q Consensus 148 ~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~ 227 (720)
+++.++++++|||+||||..|++|+|+++|++.+|+.++++.+... +..++||+||+ ++|+++.++.|+...+
T Consensus 191 ~~~~~~~~~lg~PvvVKP~~ggss~GV~~v~~~~el~~al~~a~~~------~~~vlVEe~I~-G~E~~v~vl~d~~~~~ 263 (383)
T 3k3p_A 191 SKLAEVEEKLIYPVFVKPANMGSSVGISKAENRTDLKQAIALALKY------DSRVLIEQGVD-AREIEVGILGNTDVKT 263 (383)
T ss_dssp HHHHHHHHHCCSSEEEEECC------CEEESSHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEEEEESSSCEE
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhC------CCeEEEEcCCC-CeEEEEEEEeCCCeeE
Confidence 5677788899999999999999999999999999999999887653 67999999999 5999999998854333
Q ss_pred EEEEee--eccccccce-----eEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCC
Q psy15251 228 VYLYER--DCSVQRRHQ-----KIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRL 300 (720)
Q Consensus 228 v~~~~r--~~s~~r~~~-----k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~ 300 (720)
..+.++ ++....+.. ......|+ .++++..+++.+.+.++++++|++|.+++||+++ ++|++||+|||||+
T Consensus 264 ~~~~ei~~~~~~~d~~~ky~~g~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~-~~g~~~vlEINtrP 341 (383)
T 3k3p_A 264 TLPGEIVKDVAFYDYEAKYIDNKITMAIPA-EIDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLT-EDGKVYLNELNTMP 341 (383)
T ss_dssp CCCEEEC-----------------CEESSC-CCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-TTCCEEEEEEESSC
T ss_pred EeeEEEecCCCccchhhcccCCCeeEEecC-CCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEE-CCCCEEEEEeeCCC
Confidence 333332 111111111 23456788 4999999999999999999999999999999999 77899999999999
Q ss_pred Ccc----cccccccccCcHHHHHHHH
Q psy15251 301 QVE----HPVSEMITGVDLVQWQLMV 322 (720)
Q Consensus 301 ~~~----~~~~e~~tGvdl~~~~l~~ 322 (720)
+.+ .|..-.++|+|+.+...++
T Consensus 342 G~t~~S~~p~~~~a~Gi~~~~li~~l 367 (383)
T 3k3p_A 342 GFTQWSMYPLLWENMGLSYSVLIEEL 367 (383)
T ss_dssp CCC--CHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCcccHHHHHHHHhCCCHHHHHHHH
Confidence 833 3444456799987766554
No 47
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=99.98 E-value=3e-32 Score=297.00 Aligned_cols=307 Identities=19% Similarity=0.211 Sum_probs=219.8
Q ss_pred CCCccC--CCCEEEEEcCcHH---------HHHHHHHHHHcCCcEEEEeeCCCCCCccccc-------ccEE--------
Q psy15251 1 MTIASC--VLDSILIANRGEI---------ACRIMRTAKKMGIRVVSVYSDIDADALHVKM-------ADEA-------- 54 (720)
Q Consensus 1 m~~~~~--~~~~iLI~~~G~~---------a~~iira~~~~G~~~v~v~s~~d~~~~~~~~-------aD~~-------- 54 (720)
|+|..+ +.+||.|+-+|.. |..+++++.+.+|+++.++-+.+..+....- .+..
T Consensus 1 ~~~~~~~~~~~~v~vl~GG~S~E~~vS~~sa~~v~~~l~~~~~~v~~i~i~~~g~w~~~~~~~~~~~~~~~~~~~~~~~~ 80 (373)
T 3lwb_A 1 MSANDRRDRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTDANPDALTITNRELPQVKSGS 80 (373)
T ss_dssp ------CTTCEEEEEEEEC-----CHHHHHHHHHHHHSCTTTEEEEEEEECTTCCEEEECCC------------------
T ss_pred CCcccCCcCCcEEEEEecCCCCChhhHHHHHHHHHHHhhhcCceEEEEEecCCCCeEecCchhhhhhccccccccccccc
Confidence 555522 2336777766532 7788999999999999998776543321110 0000
Q ss_pred ---EEeCCCCCcccccCHHHHH-H----HHHHcCCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHH
Q psy15251 55 ---YRLEGKSSLDTYLNQAKIL-D----IAVRSQCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTS 125 (720)
Q Consensus 55 ---~~i~~~~~~~~~~~~~~i~-~----~a~~~~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~ 125 (720)
+.+.+.+... ..+. . ..+..++|+|+|.. |...|+..++.+++.+|+|++|++..++..+.||..+
T Consensus 81 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~vfp~lhG~~gEdg~iq~lle~~gip~vG~~~~a~~~~~DK~~~ 155 (373)
T 3lwb_A 81 GTELALPADPRRG-----GQLVSLPPGAGEVLESVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFT 155 (373)
T ss_dssp ---------------------CCCCTTHHHHHHTCSEEEECCEETTEECCHHHHHHHHHTCCBSSSCHHHHHHHHBHHHH
T ss_pred ccceEeecccccc-----ceeeccccccccccCCccEEEECCCCCCCccHHHHHHHHHcCCCccCCcHHHHHHHcCHHHH
Confidence 0010000000 0000 0 01123699999998 7788999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCcccCCCCCHHH--HHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcE
Q psy15251 126 KEIMIKAEVPVIPGYHGEDQNEEI--LMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKV 203 (720)
Q Consensus 126 r~~l~~~Gvp~p~~~~~~~~s~~e--~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~ 203 (720)
|++|+++|||+|++.. +.+.++ ..+..+++|||+||||..|+||+|+++|++.+|+.++++.+.+. +..+
T Consensus 156 k~~l~~~GIp~p~~~~--~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~GV~~v~~~~eL~~a~~~a~~~------~~~v 227 (373)
T 3lwb_A 156 KKLLAADGLPVGAYAV--LRPPRSTLHRQECERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRH------DPKV 227 (373)
T ss_dssp HHHHHHTTCCBCCEEE--ECTTCCCCCHHHHHHHCSCEEEEESBCSTTTTCEEECSGGGHHHHHHHHHTT------CSSE
T ss_pred HHHHHHcCcCCCCEEE--EECcccchhHHHHHhcCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCE
Confidence 9999999999999986 554443 13346789999999999999999999999999999999877642 6799
Q ss_pred EEeccccCCceEEEEEEEcccc--cEEEEEeeecc--------cccccee-----EEEEcCCCCCCHHHHHHHHHHHHHH
Q psy15251 204 LLEKYIQSPRHIEVQIIGDRYG--NYVYLYERDCS--------VQRRHQK-----IIEEAPAPGISSEFRSRLGSTGVQV 268 (720)
Q Consensus 204 lvEeyI~g~~~~~v~v~~d~~G--~~v~~~~r~~s--------~~r~~~k-----~~e~~Pa~~l~~~~~~~l~~~a~~i 268 (720)
|||+||+ ++|+++.++.++.+ .+..+.+..++ ......| .....|+ .++++..+++.+.+.++
T Consensus 228 lVEe~I~-G~E~~v~vl~~~~~~~~~~~~~ei~~~~~~~~~~~~~d~~~ky~~~~~~~~~Pa-~l~~~~~~~i~~~a~~~ 305 (373)
T 3lwb_A 228 IVEAAIS-GRELECGVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPA-KVDDQVAEAIRQLAIRA 305 (373)
T ss_dssp EEEECCE-EEEEEEEEEECTTSCEEECCCEEEECCSTTCSEESSSCHHHHHTCTTCEEESSC-CCCHHHHHHHHHHHHHH
T ss_pred EEeCCCC-CeEEEEEEEECCCCceEEeeeeEEEccCCCCccccccchhhcccCCCceEEeCC-CCCHHHHHHHHHHHHHH
Confidence 9999999 59999999998766 33334444332 2221111 2445788 59999999999999999
Q ss_pred HHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcc----cccccccccCcHHHHH---HHHHc
Q psy15251 269 ARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE----HPVSEMITGVDLVQWQ---LMVAS 324 (720)
Q Consensus 269 ~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~----~~~~e~~tGvdl~~~~---l~~a~ 324 (720)
+++||++|.+++||+++ ++|. ||+|||||++.+ .|..-.++|+|+.+.. ++.++
T Consensus 306 ~~aLg~~G~~~vDf~~~-~dg~-~vlEIN~~PG~t~~S~~p~~~~a~Gi~~~~li~~li~~a~ 366 (373)
T 3lwb_A 306 FAAIDCRGLARVDFFLT-DDGP-VINEINTMPGFTTISMYPRMWAASGVDYPTLLATMIETTL 366 (373)
T ss_dssp HHHTTCCSEEEEEEEEE-TTEE-EEEEEESSCCCSTTSHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHhCCccEEEEEEEEE-CCCC-EEEEecCCCCCCcccHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999999999 7788 999999999843 2323357799976654 44444
No 48
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=99.98 E-value=2.5e-31 Score=289.20 Aligned_cols=299 Identities=15% Similarity=0.179 Sum_probs=214.8
Q ss_pred EEEEEcCcH---------HHHHHHHHHHHcCCcEEEEeeCCCCCCcccccc----------------cEEEEeCCCCCcc
Q psy15251 10 SILIANRGE---------IACRIMRTAKKMGIRVVSVYSDIDADALHVKMA----------------DEAYRLEGKSSLD 64 (720)
Q Consensus 10 ~iLI~~~G~---------~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~a----------------D~~~~i~~~~~~~ 64 (720)
||.|+-+|. .|..+++++++.||+++.++.+.+..+...... +..+.+.+.....
T Consensus 6 ~v~vl~GG~S~E~evSl~Sa~~v~~~l~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (372)
T 3tqt_A 6 HISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLISVIFIDHVGRWYLIDQPEMFLAHSPDHLVKEGSARPITIAFGDAAK 85 (372)
T ss_dssp EEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEECCHHHHHHSCHHHHHHHTCSEEEEECTTCSSC
T ss_pred EEEEEeccCCCccHhHHHHHHHHHHHHhhcCceEEEEEECCCCCEEeccchhhhhccccccccccccccceeeccccccc
Confidence 566665542 277899999999999999987766433211000 1111121100000
Q ss_pred cccCHHHHHHHHHHcCCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCC
Q psy15251 65 TYLNQAKILDIAVRSQCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGE 143 (720)
Q Consensus 65 ~~~~~~~i~~~a~~~~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~ 143 (720)
...... ......++|+|+|.. |...|+..++.+++.+|+|++|++..++..+.||..+|++++++|||+|++..
T Consensus 86 ~~~~~~---~~~~~~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~~-- 160 (372)
T 3tqt_A 86 PWQSLN---GDGRRYSADCVFPMVHGTQGEDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDWHT-- 160 (372)
T ss_dssp CEEEC-------CEECCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCCBCCCEE--
T ss_pred ceeecc---ccccccCCCEEEEcCCCCCCcCHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEEE--
Confidence 000000 000015799999986 66779999999999999999999999999999999999999999999999986
Q ss_pred CCCHHH----HHHHHHHhCCc-EEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEE
Q psy15251 144 DQNEEI----LMEQAERIGYP-LMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQ 218 (720)
Q Consensus 144 ~~s~~e----~~~~~~~ig~P-vvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~ 218 (720)
+.+.++ +.++.+++||| +||||..|+||+||.+|++.+|+.++++.+.+ .+..+|||+||+ ++|++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~lg~P~vvVKP~~ggss~Gv~~v~~~~eL~~a~~~a~~------~~~~vlVEe~I~-G~E~~v~ 233 (372)
T 3tqt_A 161 LSPRDATEGVYQRLLDRWGTSELFVKAVSLGSSVATLPVKTETEFTKAVKEVFR------YDDRLMVEPRIR-GREIECA 233 (372)
T ss_dssp ECTTSCCTTHHHHHHHHC---CEEEEESSCCSGGGEEEECSHHHHHHHHHHHTT------TCSCEEEEECCC-SEEEEEE
T ss_pred EechhhhhhHHHHHHHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHh------cCCCEEEECCCC-CEEEEEE
Confidence 544442 55677889999 99999999999999999999999999887643 267899999999 5999999
Q ss_pred EEEcccccEEEEEeee-----ccccccce--e-EEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCc
Q psy15251 219 IIGDRYGNYVYLYERD-----CSVQRRHQ--K-IIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGE 290 (720)
Q Consensus 219 v~~d~~G~~v~~~~r~-----~s~~r~~~--k-~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~ 290 (720)
+++++...+..+.+.. +.+...+. . .....|+ .++++..+++.+.+.+++++||++|.+++||+++ ++|+
T Consensus 234 vl~~~~~~~~~~~ei~~~~~~~d~~~ky~~g~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~rvDf~~~-~dg~ 311 (372)
T 3tqt_A 234 VLGNGAPKASLPGEIIPHHDYYSYDAKYLDPNGATTTTSV-DLSESVTKQIQQIAIDAFKMVHCSGMARVDFFVT-PNNK 311 (372)
T ss_dssp EEESSSCEECCCEEEECC---------------CEEESCC-CCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-TTCC
T ss_pred EEeCCCceEeeeEEEecCCCccchhhcccCCCceEEEeCC-CCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEe-CCCc
Confidence 9998632221122211 11222221 1 3456788 5999999999999999999999999999999999 7789
Q ss_pred EEEEEecCCCCcc----cccccccccCcHHHHHHHH
Q psy15251 291 FYFMEMNTRLQVE----HPVSEMITGVDLVQWQLMV 322 (720)
Q Consensus 291 ~~~iEiNpR~~~~----~~~~e~~tGvdl~~~~l~~ 322 (720)
+||+|||||++.+ .|..-.++|+|+.++..++
T Consensus 312 ~~vlEINt~PG~t~~S~~p~~~~~~G~~~~~li~~l 347 (372)
T 3tqt_A 312 VLVNEINTIPGFTNISMYPKMWEASGLPCPNLLDQL 347 (372)
T ss_dssp EEEEEEESSCCCSTTCHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEEEEECCCCcCccCHHHHHHHHhCCCHHHHHHHH
Confidence 9999999999833 3444456799988766544
No 49
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=99.97 E-value=7.6e-31 Score=278.70 Aligned_cols=270 Identities=19% Similarity=0.250 Sum_probs=207.1
Q ss_pred EEEEEcCc---------HHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcC
Q psy15251 10 SILIANRG---------EIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQ 80 (720)
Q Consensus 10 ~iLI~~~G---------~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~ 80 (720)
||+|+.+| ..+..+++++++.|++++.++.+..... +.+..+
T Consensus 5 ~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~-----------------------------~~~~~~ 55 (307)
T 3r5x_A 5 RIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDL-----------------------------IEKAKD 55 (307)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGH-----------------------------HHHTTT
T ss_pred EEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhH-----------------------------HHhccC
Confidence 67777665 3378899999999999998854311000 122257
Q ss_pred CCEEEeCCC-CCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHH-HHHHhC
Q psy15251 81 CQAIHPGYG-FLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILME-QAERIG 158 (720)
Q Consensus 81 ~daI~pg~g-~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~-~~~~ig 158 (720)
+|.|+|... ...|+..+...++..|++++||+++++..+.||..++++++++|||+|++.. +.+.+++.. +++.++
T Consensus 56 ~D~v~~~~~~~~ge~~~~~~~le~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~--~~~~~~~~~~~~~~~~ 133 (307)
T 3r5x_A 56 IDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIE--LTKMEDLNFDELDKLG 133 (307)
T ss_dssp CSEEEECCCSHHHHSSHHHHHHHHHTCCBSSSCHHHHHHHHCHHHHHHHHHHTTCCCCCEEE--EESSSCCCHHHHHHHC
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCEEE--EeChhhhhHHHHHhcC
Confidence 999999863 2336777888999999999999999999999999999999999999999987 556555543 677899
Q ss_pred CcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeeecccc
Q psy15251 159 YPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERDCSVQ 238 (720)
Q Consensus 159 ~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~~s~~ 238 (720)
||+|+||..|+||+|++++++.+++.++++.+... +.++++|+||+| +|+++.++.+ +++.+....+..+
T Consensus 134 ~P~vvKP~~~~~s~Gv~~v~~~~el~~~~~~~~~~------~~~~lvee~i~G-~e~~v~v~~g---~~~~~~~~~~~~~ 203 (307)
T 3r5x_A 134 FPLVVKPNSGGSSVGVKIVYDKDELISMLETVFEW------DSEVVIEKYIKG-EEITCSIFDG---KQLPIISIRHAAE 203 (307)
T ss_dssp SSEEEEECC----CCCEEECSHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEEEEEETT---EECCCEEEEEEEE
T ss_pred CCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEECCcCC-EEEEEEEECC---EEeeEEEEEcCCc
Confidence 99999999999999999999999999999887653 679999999995 9999998643 4433322222211
Q ss_pred --ccceeE----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcc----ccccc
Q psy15251 239 --RRHQKI----IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE----HPVSE 308 (720)
Q Consensus 239 --r~~~k~----~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~----~~~~e 308 (720)
....+. ....|+ .++++..+++.+.+.++++++|++|.+++||+++ +|++||+|+|||++.. .|...
T Consensus 204 ~~~~~~~~~~~g~~~~p~-~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~--~g~~~vlEiN~rpg~~~~s~~~~~~ 280 (307)
T 3r5x_A 204 FFDYNAKYDDASTIEEVI-ELPAELKERVNKASLACYKALKCSVYARVDMMVK--DGIPYVMEVNTLPGMTQASLLPKSA 280 (307)
T ss_dssp EETTEEEEEEEEEEEEEC-CCCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEE--TTEEEEEEEESSCCCSTTSHHHHHH
T ss_pred ccChhhcCCCCCCeEecC-CCCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEE--CCeEEEEEEcCCCCCCccCHHHHHH
Confidence 222222 222377 6899999999999999999999999999999999 4889999999999843 23445
Q ss_pred ccccCcHHHHHHHHH
Q psy15251 309 MITGVDLVQWQLMVA 323 (720)
Q Consensus 309 ~~tGvdl~~~~l~~a 323 (720)
..+|+|+.+...++.
T Consensus 281 ~~~G~~~~~li~~ll 295 (307)
T 3r5x_A 281 DAAGIHYSKLLDMII 295 (307)
T ss_dssp HHTTCCHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHH
Confidence 577999988666553
No 50
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=99.97 E-value=2.6e-31 Score=287.03 Aligned_cols=297 Identities=16% Similarity=0.170 Sum_probs=220.6
Q ss_pred CEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEeeCCCCCCccc-----ccc----cEEEEeCCCCCccc-c-cC
Q psy15251 9 DSILIANRGE---------IACRIMRTAKKMGIRVVSVYSDIDADALHV-----KMA----DEAYRLEGKSSLDT-Y-LN 68 (720)
Q Consensus 9 ~~iLI~~~G~---------~a~~iira~~~~G~~~v~v~s~~d~~~~~~-----~~a----D~~~~i~~~~~~~~-~-~~ 68 (720)
+||+|+.+|. .+..+++++++.||+++.++.+++...... .+. |..+ +.+.+.... . .+
T Consensus 4 ~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 82 (343)
T 1e4e_A 4 IKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVWKMCEKPCAEWENENCYSAV-LSPDKKMHGLLVKK 82 (343)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEESCCCTTCCCTTCEEEE-ECSCTTTCEEEEEE
T ss_pred cEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEcCCCCEEecccchhhccccccccee-cccccccccceeec
Confidence 4788887663 478899999999999999987765532211 011 2222 222111011 0 00
Q ss_pred HHHHHHHHHHcCCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCH
Q psy15251 69 QAKILDIAVRSQCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNE 147 (720)
Q Consensus 69 ~~~i~~~a~~~~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~ 147 (720)
.. ..+..++|+|+|.. |...|+..++.+++..|++++|++.+++..+.||..++++|+++|||+|++.. +.+.
T Consensus 83 ~~----~~~~~~~D~v~~~~~g~~ged~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~--~~~~ 156 (343)
T 1e4e_A 83 NH----EYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAFWV--INKD 156 (343)
T ss_dssp TT----EEEEEECSEEEECCCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEEE--ECTT
T ss_pred cc----ccccccCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCcCCEEE--Eech
Confidence 00 01235799999985 45557778899999999999999999999999999999999999999999876 5555
Q ss_pred HHHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccE
Q psy15251 148 EILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNY 227 (720)
Q Consensus 148 ~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~ 227 (720)
+++.. +++|||+||||..|+||+|+++|++.+|+..+++.+.. .+.+++||+||+ ++|+++.++.+..+-.
T Consensus 157 ~~~~~--~~~~~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~I~-G~E~~v~vl~~~~~~~ 227 (343)
T 1e4e_A 157 DRPVA--ATFTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQ------YDSKILIEQAVS-GCEVGCAVLGNSAALV 227 (343)
T ss_dssp CCCCG--GGSCSCEEEEESSCCTTTTCEEECSGGGHHHHHHHHTT------TCSSEEEEECCC-SEEEEEEEEEETTCCE
T ss_pred hhhhh--hccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh------cCCcEEEEeCcC-CeEEEEEEEeCCCCeE
Confidence 44332 57899999999999999999999999999999887642 257899999999 5999999999865421
Q ss_pred E-EEEeeecc-----ccc-c-----ceeEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEE
Q psy15251 228 V-YLYERDCS-----VQR-R-----HQKIIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFME 295 (720)
Q Consensus 228 v-~~~~r~~s-----~~r-~-----~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iE 295 (720)
+ .+.+..+. +.. . ........|+ .++++..+++.+.+.++++++|++|.+++||+++ ++|++||+|
T Consensus 228 ~~~~~ei~~~~~~~~~~~k~~~~~~~g~~~~~~p~-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~-~~g~~~viE 305 (343)
T 1e4e_A 228 VGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVPA-DLSAEERGRIQETVKKIYKTLGCRGLARVDMFLQ-DNGRIVLNE 305 (343)
T ss_dssp ECCCEEEEESSSCCCGGGSSSGGGCCSSEEECSSC-SSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEC-TTCCEEEEE
T ss_pred EeeeEEEeeCCCccCHhhcccccCCCCCeeEEeCC-CCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEe-CCCCEEEEE
Confidence 1 12222211 111 1 1223456787 5899999999999999999999999999999999 788999999
Q ss_pred ecCCCCcc----cccccccccCcHHHHHHHHH
Q psy15251 296 MNTRLQVE----HPVSEMITGVDLVQWQLMVA 323 (720)
Q Consensus 296 iNpR~~~~----~~~~e~~tGvdl~~~~l~~a 323 (720)
+|||++.+ .|....++|+|+.++..++.
T Consensus 306 iN~rpg~t~~s~~p~~~~~~G~~~~~l~~~li 337 (343)
T 1e4e_A 306 VNTLPGFTSYSRYPRMMAAAGISLPELIDRLI 337 (343)
T ss_dssp EESSCCCSTTCHHHHHHHHTTCCHHHHHHHHH
T ss_pred eeCCCCCCcccHHHHHHHHhCCCHHHHHHHHH
Confidence 99999865 24344566999988876654
No 51
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=99.97 E-value=2.8e-31 Score=287.06 Aligned_cols=298 Identities=18% Similarity=0.149 Sum_probs=216.8
Q ss_pred EEEEEcCcH---------HHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccE--------EEEeCCCCCcccccCHHHH
Q psy15251 10 SILIANRGE---------IACRIMRTAKKMGIRVVSVYSDIDADALHVKMADE--------AYRLEGKSSLDTYLNQAKI 72 (720)
Q Consensus 10 ~iLI~~~G~---------~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~--------~~~i~~~~~~~~~~~~~~i 72 (720)
||.|+-+|. .|..+++++++.||+++.++.+.+..+....-.+. .-.+.+............
T Consensus 5 ~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (346)
T 3se7_A 5 KIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGITKSGAWQLCDGPGENWEDGNCRPAVLSPDRSVHGLLVLEQ- 83 (346)
T ss_dssp EEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEESCSSSSSSSSCCEEEEECCCTTTCEEEEEET-
T ss_pred EEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEEEEECCCCCEEeccchhhhhcccccccceeccCccCccceeccc-
Confidence 566665442 48899999999999999998766543211100000 000111000000000000
Q ss_pred HHHHHHcCCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHH
Q psy15251 73 LDIAVRSQCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILM 151 (720)
Q Consensus 73 ~~~a~~~~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~ 151 (720)
...++.++|.|+|.. |...|+..++.+++.+|++++|+++.++..+.||..+|++++++|||+|++.. +.+.+ .
T Consensus 84 -~~~~~~~~D~v~~~lhG~~gedg~iq~~le~~gip~~g~~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~--~~~~~--~ 158 (346)
T 3se7_A 84 -GKYETIRLDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNFWT--VTADE--K 158 (346)
T ss_dssp -TEEEEEECSEEEECCCSTTTTSSHHHHHHHHHCCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEEE--EETTS--C
T ss_pred -ccccccCCCEEEEccCCCCCCChHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHcCcCcCCEEE--EcCcH--H
Confidence 002245799999987 77789999999999999999999999999999999999999999999999986 54443 3
Q ss_pred HHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEccccc-EEEE
Q psy15251 152 EQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGN-YVYL 230 (720)
Q Consensus 152 ~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~-~v~~ 230 (720)
.+.+.+|||+||||..|+||+|++++++.+|+.++++.+.. .+..++||+||+ ++|+++.++.++++. +..+
T Consensus 159 ~~~~~lg~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~vlvEe~I~-G~E~~v~vl~~~~~~~~~~~ 231 (346)
T 3se7_A 159 IPTDQLTYPVFVKPARSGSSFGVSKVAREEDLQGAVEAARE------YDSKVLIEEAVI-GTEIGCAVMGNGPELITGEV 231 (346)
T ss_dssp CCTTTCCSSEEEEESSCCTTTTCEEECSHHHHHHHHHHHTT------TCSEEEEEECCC-SEEEEEEEEEETTEEEECCC
T ss_pred HHHHhcCCCEEEEeCCCCCCcCEEEECCHHHHHHHHHHHHh------CCCcEEEEeCcC-CEEEEEEEEecCCCeEEEee
Confidence 34567899999999999999999999999999999987653 267999999999 599999999986542 2222
Q ss_pred Eeeecc------cccccee-----EEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCC
Q psy15251 231 YERDCS------VQRRHQK-----IIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTR 299 (720)
Q Consensus 231 ~~r~~s------~~r~~~k-----~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR 299 (720)
.+..+. .|++..+ .....|+ .++++..+++.+.+.++++++|++|.+++||+++ ++|++||+|+|||
T Consensus 232 ~e~~~~~~~~d~~q~~~~ky~~~~~~~~~pa-~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~-~~g~~~vlEiN~r 309 (346)
T 3se7_A 232 DQITLSHGFFKIHQESTPESGSDNSAVTVPA-DISTTSRSLVQDTAKAVYRALGCRGLSRVDLFLT-EDGKVVLNEVNTF 309 (346)
T ss_dssp EEECCC--------------CGGGSCEESSC-CCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEC-TTSCEEEEEEESS
T ss_pred EEEecCCCCcCcccchhccccCCCeeEEeCC-CCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEe-CCCCEEEEEEeCC
Confidence 332221 1111222 2245687 5999999999999999999999999999999999 7789999999999
Q ss_pred CCcc----cccccccccCcHHHHHHHH
Q psy15251 300 LQVE----HPVSEMITGVDLVQWQLMV 322 (720)
Q Consensus 300 ~~~~----~~~~e~~tGvdl~~~~l~~ 322 (720)
++.+ .|....++|+|+.++..++
T Consensus 310 PG~t~~s~~p~~~~~~G~~~~~l~~~l 336 (346)
T 3se7_A 310 PGMTSYSRYPRMMTAAGLSRADVIDRL 336 (346)
T ss_dssp CCCSTTCHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCcccHHHHHHHHhCCCHHHHHHHH
Confidence 9843 2333457899998866554
No 52
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=99.97 E-value=1.1e-30 Score=279.53 Aligned_cols=287 Identities=20% Similarity=0.216 Sum_probs=214.0
Q ss_pred EEEEEcCcH-----H----HHHHHHHHHHcCCcEEEEeeCCCCCCcc-----cccccEEEEeCCCCCcccccCHHHHHHH
Q psy15251 10 SILIANRGE-----I----ACRIMRTAKKMGIRVVSVYSDIDADALH-----VKMADEAYRLEGKSSLDTYLNQAKILDI 75 (720)
Q Consensus 10 ~iLI~~~G~-----~----a~~iira~~~~G~~~v~v~s~~d~~~~~-----~~~aD~~~~i~~~~~~~~~~~~~~i~~~ 75 (720)
||+|+.+|. + +..+++++++ +++.++.+.+..... ..+++..+.+.-.. .... +
T Consensus 5 ~v~vl~gg~s~E~~vSl~s~~~v~~al~~---~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~--- 72 (322)
T 2fb9_A 5 RVLLIAGGVSPEHEVSLLSAEGVLRHIPF---PTDLAVIAQDGRWLLGEKALTALEAKAAPEGEHP---FPPP---L--- 72 (322)
T ss_dssp CEEEEEECSSTTHHHHHHHHHHHHHHCSS---CEEEEEECTTSCEECHHHHHHHTTSSCCCCCCBC---SSCC---C---
T ss_pred EEEEEeCCCchhHHHHHHHHHHHHHHhcc---CeEEEEEcCCCCEEecccchhhhccccccceecc---cccc---c---
Confidence 677776552 2 6788888877 777776555443221 01222111010000 0000 1
Q ss_pred HHHcCCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHH
Q psy15251 76 AVRSQCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQA 154 (720)
Q Consensus 76 a~~~~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~ 154 (720)
++.++|+|+|+. |...|+..++.+++..|++++|++.+++..+.||..+|++++++|||+|++.. +.+.++ +..
T Consensus 73 -~~~~~D~v~~~~hg~~gedg~i~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~--~~~~~~--~~~ 147 (322)
T 2fb9_A 73 -SWERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWVA--VRKGEP--PVV 147 (322)
T ss_dssp -CCTTCSEEEEECCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEE--EETTSC--CCC
T ss_pred -cccCCCEEEEeCCCCCCccHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCEEE--EECchh--hhh
Confidence 256799999997 77788888999999999999999999999999999999999999999999876 444433 122
Q ss_pred HHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEEEEEeee
Q psy15251 155 ERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYVYLYERD 234 (720)
Q Consensus 155 ~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v~~~~r~ 234 (720)
++|||+||||..|+||+|+.+|++.+|+.++++.+.+ .+..++||+||+|.+|+++.++++++++++..++..
T Consensus 148 -~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~------~~~~vlvEe~I~G~~E~~v~vl~~~~~~~~~~~ei~ 220 (322)
T 2fb9_A 148 -PFDPPFFVKPANTGSSVGISRVERFQDLEAALALAFR------YDEKAVVEKALSPVRELEVGVLGNVFGEASPVGEVR 220 (322)
T ss_dssp -CSCSCEEEEETTCCTTTTCEEESSHHHHHHHHHHHTT------TCSEEEEEECCSSCEEEEEEEESSSSCEEEEEEEEE
T ss_pred -ccCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------cCCeEEEEeCCCCCeeEEEEEEeCCCceEeeeEEEe
Confidence 6899999999999999999999999999999887643 257999999999559999999988655555555443
Q ss_pred c--ccccccee-----EEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcc-c--
Q psy15251 235 C--SVQRRHQK-----IIEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE-H-- 304 (720)
Q Consensus 235 ~--s~~r~~~k-----~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~-~-- 304 (720)
+ .......+ .....|+ .++++..+++.+.+.++++++|++|.+++||+++ +|++||+|+|||++.. +
T Consensus 221 ~~~~~~~~~~k~~~g~~~~~~Pa-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~--~g~~~vlEiN~rpg~t~~s~ 297 (322)
T 2fb9_A 221 YEAPFYDYETKYTPGRAELLIPA-PLDPGTQETVQELALKAYKVLGVRGMARVDFFLA--EGELYLNELNTIPGFTPTSM 297 (322)
T ss_dssp EECCEEETTTEEECCEEEEESSC-CCCTTHHHHHHHHHHHHHHHHTCCSEEEEEEEEE--TTEEEEEEEESSCCCSSSCH
T ss_pred eCCCccCHHHcccCCCeEEEeCC-CCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEE--CCcEEEEEEECCCCCCcccH
Confidence 1 22222222 2345787 5898999999999999999999999999999999 6889999999999864 2
Q ss_pred -ccccccccCcHHHHHHHHH
Q psy15251 305 -PVSEMITGVDLVQWQLMVA 323 (720)
Q Consensus 305 -~~~e~~tGvdl~~~~l~~a 323 (720)
|....++|+|+.++..++.
T Consensus 298 ~p~~~~~~G~~~~~l~~~li 317 (322)
T 2fb9_A 298 YPRLFEAGGVAYPELLRRLV 317 (322)
T ss_dssp HHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHH
Confidence 2233467999888766543
No 53
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=99.96 E-value=1.9e-29 Score=274.15 Aligned_cols=231 Identities=17% Similarity=0.184 Sum_probs=181.9
Q ss_pred CCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHH--HHHHHHHH
Q psy15251 80 QCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEE--ILMEQAER 156 (720)
Q Consensus 80 ~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~--e~~~~~~~ 156 (720)
++|+|+|.. |...|+..++.+++..|++++|++.+++..+.||..+|++|+++|||+|++.. +.+.+ ++.+ +++
T Consensus 107 ~~D~v~~~lhg~~gedg~i~~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~--~~~~~~~~~~~-~~~ 183 (367)
T 2pvp_A 107 ELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRIEASVLSYNKYLTKLYAKDLGIKTLDYVL--LNEKNRANALD-LMN 183 (367)
T ss_dssp ECCSEEECCCSTTTTSSHHHHHHHHTTCCEESCCHHHHHHHHSHHHHHHHHHHHTCBCCCCEE--ECTTTGGGHHH-HCC
T ss_pred CCCEEEEcCCCCCccHHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCcCCCCEEE--EeCCchHHHHH-Hhc
Confidence 689999985 56678888999999999999999999999999999999999999999999986 55554 5655 677
Q ss_pred hCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEE-EEEEEcccccEEEEE-eee
Q psy15251 157 IGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIE-VQIIGDRYGNYVYLY-ERD 234 (720)
Q Consensus 157 ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~-v~v~~d~~G~~v~~~-~r~ 234 (720)
+|||+||||..|+||.|+.+|++.+|+.++++.+.+ .+..++||+||+|.+|++ +.+..+ |+.+... +..
T Consensus 184 lg~PvvVKP~~g~ss~Gv~~v~~~~el~~a~~~~~~------~~~~vlVEe~I~G~~E~svi~v~v~--g~~~~~~~ei~ 255 (367)
T 2pvp_A 184 FNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFE------YSKEVLIEPFIQGVKEYNLAGCKIK--KDFCFSYIEEP 255 (367)
T ss_dssp SCSCEEEEESSCCTTTTCEEESSTTSHHHHHHHHTT------TCSCEEEEECCTTCEEEEEEEEEET--TEEEEEEEEET
T ss_pred cCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHh------cCCcEEEEeCCCCCceeeEEEEEEC--CEEEEEEEEEe
Confidence 999999999999999999999999999999887643 267999999999658955 434333 5543332 211
Q ss_pred cc--ccccceeE-----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcc-ccc
Q psy15251 235 CS--VQRRHQKI-----IEEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE-HPV 306 (720)
Q Consensus 235 ~s--~~r~~~k~-----~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~-~~~ 306 (720)
.. ......+. ....|+ .++++..+++.+.+.++++++|++|.+++||+++ +|++||+|+|||++.+ +.+
T Consensus 256 ~~~~~~d~~~ky~~g~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~--~g~~~vlEiN~rpg~t~~s~ 332 (367)
T 2pvp_A 256 NKQEFLDFKQKYLDFSRNKAPKA-SLSNALEEQLKENFKKLYSDLFDGAIIRCDFFVI--ENEVYLNEINPIPGSLANYL 332 (367)
T ss_dssp TTTEEECCCCSSCCSCCCSCCCC-CCCHHHHHHHHHHHHHHHTTTSTTCCEEEEEEEE--TTEEEEEEEESSCGGGGGGG
T ss_pred cCCceEcccccccCCCeeEEecC-CCCHHHHHHHHHHHHHHHHHcCCCCEEEEEEEEE--CCeEEEEEEeCCCCCCcccc
Confidence 00 11111121 124577 5899999999999999999999999999999999 6789999999999864 223
Q ss_pred ccccccCcHHHHHHHHHcCCCCC
Q psy15251 307 SEMITGVDLVQWQLMVASGQELP 329 (720)
Q Consensus 307 ~e~~tGvdl~~~~l~~a~G~~l~ 329 (720)
.. |+.++..++..+.++.
T Consensus 333 ~p-----~~~~l~~~li~~~~~~ 350 (367)
T 2pvp_A 333 FD-----DFKTTLENLAQSLPKT 350 (367)
T ss_dssp SS-----SHHHHHHHHHHHCC--
T ss_pred cC-----CHHHHHHHHHhCcccc
Confidence 32 8888888888775543
No 54
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=99.96 E-value=3.7e-29 Score=261.35 Aligned_cols=272 Identities=17% Similarity=0.192 Sum_probs=200.0
Q ss_pred EEEEcC--cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCC-EEEeC
Q psy15251 11 ILIANR--GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQ-AIHPG 87 (720)
Q Consensus 11 iLI~~~--G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d-aI~pg 87 (720)
|+|++. +..+..++++++++|++++.++.+++.. .++|. + ....++| ++++.
T Consensus 2 I~il~~~~~~~~~~~~~a~~~~G~~v~~~~~~~~~~----~~~~~------------~---------~~~~~~d~~~~~~ 56 (280)
T 1uc8_A 2 LAILYDRIRPDERMLFERAEALGLPYKKVYVPALPM----VLGER------------P---------KELEGVTVALERC 56 (280)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCEEEEEGGGCCE----ETTBC------------C---------GGGTTCCEEEECC
T ss_pred EEEEecCCCHHHHHHHHHHHHcCCcEEEEehhhcee----eccCC------------C---------cccCCCCEEEECC
Confidence 677764 5678899999999999999997654321 12221 1 1124688 88887
Q ss_pred CCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecC
Q psy15251 88 YGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVR 167 (720)
Q Consensus 88 ~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~ 167 (720)
++. .++..++..++..|+++++ +++++..+.||..++++++++|||+|++.. +.+.+++.+++++++||+|+||..
T Consensus 57 ~~~-~~~~~~~~~l~~~g~~~~~-~~~~~~~~~dK~~~~~~l~~~gi~~p~~~~--~~~~~~~~~~~~~~~~p~vvKp~~ 132 (280)
T 1uc8_A 57 VSQ-SRGLAAARYLTALGIPVVN-RPEVIEACGDKWATSVALAKAGLPQPKTAL--ATDREEALRLMEAFGYPVVLKPVI 132 (280)
T ss_dssp SSH-HHHHHHHHHHHHTTCCEES-CHHHHHHHHBHHHHHHHHHHTTCCCCCEEE--ESSHHHHHHHHHHHCSSEEEECSB
T ss_pred ccc-hhhHHHHHHHHHCCCceeC-CHHHHHHhCCHHHHHHHHHHcCcCCCCeEe--eCCHHHHHHHHHHhCCCEEEEECC
Confidence 762 2567788899999999884 699999999999999999999999999987 889999999999999999999999
Q ss_pred CCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccC-CceEEEEEEEcccccEEEEEeeeccccccc-eeEE
Q psy15251 168 GGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQS-PRHIEVQIIGDRYGNYVYLYERDCSVQRRH-QKII 245 (720)
Q Consensus 168 g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g-~~~~~v~v~~d~~G~~v~~~~r~~s~~r~~-~k~~ 245 (720)
|+||+|++++++.+++.++++.+.. ...+.+.++++|+||+| ++++++.++. |+.+....+...-.+.+ ....
T Consensus 133 g~~~~gv~~v~~~~el~~~~~~~~~--~~~~~~~~~lvqe~i~~~~~e~~v~v~~---~~~~~~~~~~~~~~~~~~~~g~ 207 (280)
T 1uc8_A 133 GSWGRLLAXXXXXXXXXXXXXXKEV--LGGFQHQLFYIQEYVEKPGRDIRVFVVG---ERAIAAIYRRSAHWITNTARGG 207 (280)
T ss_dssp CCBCSHHHHHHHHHC--------------CTTTTCEEEEECCCCSSCCEEEEEET---TEEEEEEEC-------------
T ss_pred CCCcccceecccccccchhhhhHhh--hcccCCCcEEEEeccCCCCceEEEEEEC---CEEEEEEEEecCCccccccCCc
Confidence 9999999999999999988876511 11123578999999997 6778877763 34544433310000000 0001
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcC
Q psy15251 246 EEAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASG 325 (720)
Q Consensus 246 e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G 325 (720)
...|+ .++ +++.+.+.++++++|+ |.+++||+++ ++| +||+|+|||++... ++.++|+|+.+++++.++|
T Consensus 208 ~~~p~-~l~----~~~~~~~~~~~~~lg~-g~~~vD~~~~-~~g-~~~iEiN~r~g~~~--~~~~~G~~~~~~~~~~~~~ 277 (280)
T 1uc8_A 208 QAENC-PLT----EEVARLSVKAAEAVGG-GVVAVDLFES-ERG-LLVNEVNHTMEFKN--SVHTTGVDIPGEILKYAWS 277 (280)
T ss_dssp -CEEC-CCC----HHHHHHHHHHHHHTTC-SEEEEEEEEE-TTE-EEEEEEETTCCCTT--HHHHHCCCHHHHHHHHHHH
T ss_pred cccCC-CCC----HHHHHHHHHHHHHhCC-CeEEEEEEEe-CCC-eEEEEEeCCCCccc--hheeeccCHHHHHHHHHHh
Confidence 12344 344 4889999999999999 9999999999 666 99999999998654 5678899999999999887
Q ss_pred C
Q psy15251 326 Q 326 (720)
Q Consensus 326 ~ 326 (720)
+
T Consensus 278 ~ 278 (280)
T 1uc8_A 278 L 278 (280)
T ss_dssp T
T ss_pred h
Confidence 5
No 55
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=99.95 E-value=5.9e-27 Score=251.30 Aligned_cols=262 Identities=14% Similarity=0.165 Sum_probs=184.3
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCC-CcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVYSDIDAD-ALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~-~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
||||+|+| .+..++++++++|+++++++.+.+.. .....++|+.+.++ .+.+ +. +++ .+|+|+|..
T Consensus 4 ~Ililg~g-~~~~l~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~d-~~---l~~--~~d~i~~~~ 70 (334)
T 2r85_A 4 RIATYASH-SALQILKGAKDEGFETIAFGSSKVKPLYTKYFPVADYFIEE------KYPE-EE---LLN--LNAVVVPTG 70 (334)
T ss_dssp EEEEESST-THHHHHHHHHHTTCCEEEESCGGGHHHHHTTSCCCSEEECS------SCCH-HH---HHH--TTEEECCCT
T ss_pred EEEEECCh-hHHHHHHHHHhCCCEEEEEECCCCCcccccccccCceEecC------CcCh-HH---hcc--cCCEEEECc
Confidence 89999999 99999999999999999996554322 11345677776543 1222 22 222 358888764
Q ss_pred CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecCC
Q psy15251 89 GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVRG 168 (720)
Q Consensus 89 g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~g 168 (720)
++.. ......++..|++++ |+++++..+.||..++++|+++|||+|++ . .+.++ ++||+||||..|
T Consensus 71 e~~~--~~~~~~le~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gip~p~~-~---~~~~~-------l~~P~vvKP~~g 136 (334)
T 2r85_A 71 SFVA--HLGIELVENMKVPYF-GNKRVLRWESDRNLERKWLKKAGIRVPEV-Y---EDPDD-------IEKPVIVKPHGA 136 (334)
T ss_dssp THHH--HHCHHHHHTCCSCBB-SCTTHHHHHHSHHHHHHHHHHTTCCCCCB-C---SCGGG-------CCSCEEEEECC-
T ss_pred chhh--hhHHHHHHHcCCCcc-CCHHHHHHHHhHHHHHHHHHHcCCCCCCc-c---CChHH-------cCCCEEEEeCCC
Confidence 4221 122345678999976 56789999999999999999999999997 2 44443 579999999999
Q ss_pred CCCcceEEeCCHHHHHHHHHHHHHHHHhcCC-CCcEEEeccccCCceEEEEEEEccccc-EEEE-Eeeecccc-------
Q psy15251 169 GGGKGMRIVRDSANFLAQLRSAQRESQSAFN-DSKVLLEKYIQSPRHIEVQIIGDRYGN-YVYL-YERDCSVQ------- 238 (720)
Q Consensus 169 ~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~-~~~~lvEeyI~g~~~~~v~v~~d~~G~-~v~~-~~r~~s~~------- 238 (720)
+||+|+++|++.+|+..+++.+.... .|. ...+++|+||+| .++++.++.+..++ +-.+ ....+..+
T Consensus 137 ~~s~Gv~~v~~~~el~~~~~~~~~~~--~~~~~~~~lvee~i~G-~e~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~ 213 (334)
T 2r85_A 137 KGGKGYFLAKDPEDFWRKAEKFLGIK--RKEDLKNIQIQEYVLG-VPVYPHYFYSKVREELELMSIDRRYESNVDAIGRI 213 (334)
T ss_dssp ---TTCEEESSHHHHHHHHHHHHCCC--SGGGCCSEEEEECCCC-EEEEEEEEEETTTTEEEEEEEEEEEEEEGGGGGGS
T ss_pred CCCCCEEEECCHHHHHHHHHHHHhhc--ccCCCCcEEEEeccCC-ceeEEEEeecCcCceeeeeeeccEEEeccCccccc
Confidence 99999999999999999887765321 111 378999999995 77787766653222 1111 11111110
Q ss_pred ---ccc----eeEEEEc---CCCCCCHHHHHHHHHHHHHHHHHc-----CCcceeEEEEEEeCCCCcEEEEEecCCCCcc
Q psy15251 239 ---RRH----QKIIEEA---PAPGISSEFRSRLGSTGVQVARAV-----RYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE 303 (720)
Q Consensus 239 ---r~~----~k~~e~~---Pa~~l~~~~~~~l~~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~ 303 (720)
+.. ....... |+ .++++..+++.+.+.++++++ ++.|.+++||+++ ++|++||+|+|||+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~g~~p~-~l~~~~~~~i~~~a~~~~~~l~~~~~~~~G~~~vd~~~~-~~g~~~viEiN~R~g~~ 291 (334)
T 2r85_A 214 PAKDQLEFDMDITYTVIGNIPI-VLRESLLMDVIEAGERVVKAAEELMGGLWGPFCLEGVFT-PDLEFVVFEISARIVAG 291 (334)
T ss_dssp CHHHHTTSCCCCCEEEEEEEEC-CCCGGGHHHHHHHHHHHHHHHHHHSSCCCEEEEEEEEEC-TTSCEEEEEEECSCCGG
T ss_pred ccccccccccCCceeeeCCCCc-ccCHHHHHHHHHHHHHHHHHHHhhcccccccEEEEEEEC-CCCCEEEEEEeCCcCCC
Confidence 000 0011122 76 488888999999999999999 8899999999999 77889999999999974
No 56
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=99.95 E-value=3.1e-26 Score=247.00 Aligned_cols=270 Identities=14% Similarity=0.180 Sum_probs=190.6
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCC-CcccccccEEEEeCCCCCcccccCH--HHHHHHHHHcCCCEEE
Q psy15251 9 DSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDAD-ALHVKMADEAYRLEGKSSLDTYLNQ--AKILDIAVRSQCQAIH 85 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~-~~~~~~aD~~~~i~~~~~~~~~~~~--~~i~~~a~~~~~daI~ 85 (720)
.+|+|+|+| .++.++++++++|++|++++.+++.+ ......+|+.+.++ .+.|. +.+++.+++.+ +.|.
T Consensus 19 ~~I~ilGs~-l~~~l~~aAk~lG~~vi~vd~~~~~p~~~~~~~ad~~~~~d------~~~d~~~~~~l~~l~~~~-~vV~ 90 (361)
T 2r7k_A 19 ITIATLGSH-TSLHILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVD------NFSDIKNEEIQEKLRELN-SIVV 90 (361)
T ss_dssp CEEEEESST-THHHHHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECS------SGGGGGSHHHHHHHHHTT-EEEC
T ss_pred CEEEEECcH-HHHHHHHHHHHCCCEEEEEECCCCCCcccccccCceEEECC------CcccccHHHHHHHHHHcC-CEEE
Confidence 469999999 89999999999999999997665532 11456799988752 34452 45555555554 5554
Q ss_pred eCCCCCcccHH---HHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEE
Q psy15251 86 PGYGFLSENAE---FANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLM 162 (720)
Q Consensus 86 pg~g~lsE~~~---~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~Pvv 162 (720)
|-. |+.. +..+.++.|++++| +..++....||...|++|+++|||+|+++ ++.+++ +||+|
T Consensus 91 pe~----~~v~~~gl~~l~~~~g~~v~g-~~~a~~~e~~k~~~k~~l~~~GIptp~~~----~~~~e~-------~~PvV 154 (361)
T 2r7k_A 91 PHG----SFIAYCGLDNVENSFLVPMFG-NRRILRWESERSLEGKLLREAGLRVPKKY----ESPEDI-------DGTVI 154 (361)
T ss_dssp CBH----HHHHHHCHHHHHHTCCSCBBS-CGGGGGTTTCHHHHHHHHHHTTCCCCCEE----SSGGGC-------CSCEE
T ss_pred eCc----hhhhHHHHHHHHHHcCCCcCC-CHHHHHHhhhHHHHHHHHHHcCcCCCCEe----CCHHHc-------CCCEE
Confidence 321 2222 22334489999886 88888889999999999999999999853 355543 69999
Q ss_pred EeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCC---CcEEEeccccCCceEEEEEEEcc-cccE--EEEEee---
Q psy15251 163 IKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFND---SKVLLEKYIQSPRHIEVQIIGDR-YGNY--VYLYER--- 233 (720)
Q Consensus 163 vKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~---~~~lvEeyI~g~~~~~v~v~~d~-~G~~--v~~~~r--- 233 (720)
|||..+++|+|++++++.+|+.++++.+... ..|+. .+++|||||+| .++++..+..- .+++ +.+-.|
T Consensus 155 VK~~~~a~GkGv~v~~s~ee~~~a~~~~~~~--~~~~~~~~~~viIEEfl~G-~e~s~~~f~~~~~~~~e~~~id~r~~~ 231 (361)
T 2r7k_A 155 VKFPGARGGRGYFIASSTEEFYKKAEDLKKR--GILTDEDIANAHIEEYVVG-TNFCIHYFYSPLKDEVELLGMDKRYES 231 (361)
T ss_dssp EECSCCCC---EEEESSHHHHHHHHHHHHHT--TSCCHHHHHHCEEEECCCS-EEEEEEEEEETTTTEEEEEEEEEEEEE
T ss_pred EeeCCCCCCCCEEEECCHHHHHHHHHHHHhc--cccccCCCCeEEEEeccce-EEeeEEEEecccCCeeEEEEecceEEe
Confidence 9999999999999999999999998877532 11221 46999999996 66665555442 2222 211111
Q ss_pred --e--cccccc-------ceeEEEE--cCCCCCCHHHHHHHHHHHHHHHHHc------CCcceeEEEEEEeCCCCcEEEE
Q psy15251 234 --D--CSVQRR-------HQKIIEE--APAPGISSEFRSRLGSTGVQVARAV------RYHNAGTVEFIMDPSSGEFYFM 294 (720)
Q Consensus 234 --~--~s~~r~-------~~k~~e~--~Pa~~l~~~~~~~l~~~a~~i~~al------g~~G~~~vEf~~~~~~g~~~~i 294 (720)
| |.+..+ .....+. .|+ .+++++.+++.+.+.++++++ ++.|++++||+++ ++|++|++
T Consensus 232 ~~dgi~~~~~~~~~~~~~~p~~v~~G~~Pa-~l~~~~~~~a~~~a~~v~~al~~~~~~~~~G~~~vE~fvt-~dg~i~V~ 309 (361)
T 2r7k_A 232 NIDGLVRIPAKDQLEMNINPSYVITGNIPV-VIRESLLPQVFEMGDKLVAKAKELVPPGMIGPFCLQSLCN-ENLELVVF 309 (361)
T ss_dssp EHHHHTTSCHHHHHTCCCCCCEEEEEEEEC-CCCGGGHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEEEEC-TTSCEEEE
T ss_pred ecccceecchhhhhcccCCCceEEecCcCC-cCCHHHHHHHHHHHHHHHHHHHhhccCCccceEEEEEEEc-CCCCEEEE
Confidence 0 100000 0001111 287 588899999999999999999 8999999999999 77889999
Q ss_pred EecCCCCcccccc
Q psy15251 295 EMNTRLQVEHPVS 307 (720)
Q Consensus 295 EiNpR~~~~~~~~ 307 (720)
|+|||+++..++.
T Consensus 310 EIapR~gGg~~~~ 322 (361)
T 2r7k_A 310 EMSARVDGGTNSF 322 (361)
T ss_dssp EEESSBCGGGGGG
T ss_pred EEcCCCCCCcccc
Confidence 9999999874443
No 57
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=99.92 E-value=6.3e-26 Score=240.10 Aligned_cols=250 Identities=14% Similarity=0.131 Sum_probs=169.9
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCC-CcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVYSDIDAD-ALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~-~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
+|.++|+| .++.++++|+++|++|++++..++.+ .....+||+.+.++ .|.| ++ ...|.|.|-.
T Consensus 4 ~I~~lGsg-l~~~~~~aAk~lG~~viv~d~~~~~p~~~a~~~ad~~~~~~------~~~d------l~--~~~dvitpe~ 68 (320)
T 2pbz_A 4 IVSTIASH-SSLQILLGAKKEGFKTRLYVSPKRRPFYSSLPIVDDLVVAE------EMTS------IL--NDDGIVVPHG 68 (320)
T ss_dssp CEEEESST-THHHHHHHHHHTTCCEEEEECTTTHHHHHTCTTCSEEEECS------CSCC------TT--CCSSBCCCBT
T ss_pred EEEEEcCH-hHHHHHHHHHHCCCEEEEEECCCCCccchhhhcCCeEEECC------cHHH------HH--hcCCEEEecc
Confidence 59999999 99999999999999999997664432 11466799998763 2444 22 2347676544
Q ss_pred CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecCC
Q psy15251 89 GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVRG 168 (720)
Q Consensus 89 g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~g 168 (720)
++.. ......+++.|++++ |+++++....||...|++|+++|||+|+++. . +++ +++|||||||..|
T Consensus 69 e~v~--~~~l~~le~~~~p~~-p~~~~l~~~~dr~~~~~~l~~~Gip~P~~~~--~---ee~-----~i~~PviVKp~~g 135 (320)
T 2pbz_A 69 SFVA--YLGIEAIEKAKARFF-GNRRFLKWETTFELQDKALEGAGIPRVEVVE--P---EDA-----KPDELYFVRIEGP 135 (320)
T ss_dssp THHH--HSCHHHHHTCCSCCB-SCSSGGGGGSCHHHHHHHHHHHTCCBCCBCC--S---CCC-----CSSCCEEEECC--
T ss_pred cchh--HHHHHHHHHcCCCcC-CCHHHHHHHHhHHHHHHHHHHCCcCCCCeeC--H---hHc-----CcCCcEEEEECCC
Confidence 3221 112334678999966 6788889999999999999999999999863 2 222 5899999999999
Q ss_pred CCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEc-ccccEEEEEeee-cccccccee---
Q psy15251 169 GGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGD-RYGNYVYLYERD-CSVQRRHQK--- 243 (720)
Q Consensus 169 ~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d-~~G~~v~~~~r~-~s~~r~~~k--- 243 (720)
+||+|++++++ +|+..+++.+ +.+++|||||+|. ++.+.++.+ -.|++..++.++ +.. .....
T Consensus 136 ~ggkG~~~v~~-eel~~~~~~~---------~~~~IiEEfI~g~-~~~~~~f~~~~~g~~e~~~~~~r~e~-~~g~~~~p 203 (320)
T 2pbz_A 136 RGGSGHFIVEG-SELEERLSTL---------EEPYRVERFIPGV-YLYVHFFYSPILERLELLGVDERVLI-ADGNARWP 203 (320)
T ss_dssp ----------C-EECSCCCC-------------CCEEEECCCSC-EEEEEEEEETTTTEEEEEEEEEEEET-TCSSSSSC
T ss_pred CCCCCEEEECh-HHHHHHHHhc---------CCCEEEEeeeceE-ecceeEEeccccCceeEEEecceEEE-ECCeeecc
Confidence 99999999999 9997665433 1579999999974 446656654 345555443322 111 11100
Q ss_pred ------EEE-EcCCCCCCHHHHHHHHHHHHHHHHHc------CCcceeEEEEEEeCCCCcEEEEEecCCCCcc
Q psy15251 244 ------IIE-EAPAPGISSEFRSRLGSTGVQVARAV------RYHNAGTVEFIMDPSSGEFYFMEMNTRLQVE 303 (720)
Q Consensus 244 ------~~e-~~Pa~~l~~~~~~~l~~~a~~i~~al------g~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~ 303 (720)
++. ..|+ .+++++.+++.+.+.++++++ |+.|++++| ++ ++|++|++|+|||+++.
T Consensus 204 ~~~~~~~~~G~~P~-~~~~~~~~~a~~~a~~i~~~L~~l~~~g~~G~~~vE--~~-~dg~~~v~EIapR~~GG 272 (320)
T 2pbz_A 204 VKPLPYTIVGNRAI-ALRESLLPQLYDYGLAFVRTMRELEPPGVIGPFALH--FA-YDGSFKAIGIASRIDGG 272 (320)
T ss_dssp CSCCCCCEEEEEEC-EECGGGHHHHHHHHHHHHHHHHHHSTTCCCSEEEEE--EE-CSSSCEEEEEESSBCSG
T ss_pred cCCCceeeecCCCC-ccCHHHHHHHHHHHHHHHHHHHhhccCCceeeEEEE--Ec-CCCcEEEEEecCCCCCC
Confidence 111 1276 477888899999999999999 999999999 56 57889999999999865
No 58
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}
Probab=99.91 E-value=6.4e-24 Score=225.10 Aligned_cols=209 Identities=15% Similarity=0.115 Sum_probs=159.4
Q ss_pred HHHHHHHHHcCCCEEEe-CCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHH
Q psy15251 70 AKILDIAVRSQCQAIHP-GYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEE 148 (720)
Q Consensus 70 ~~i~~~a~~~~~daI~p-g~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~ 148 (720)
+.+.+++++ +|++++ +++.......+.+.++..| +++|+++++++.++||..+++++++ |||+|++..
T Consensus 61 ~~l~~~~~~--~D~~~~i~~~ed~~l~~~~~~l~~~g-~~~g~~~~~~~~~~dK~~~~~~l~~-Gip~p~~~~------- 129 (305)
T 3df7_A 61 DSMEKYLEK--SDAFLIIAPEDDFLLYTLTKKAEKYC-ENLGSSSRAIAVTSDKWELYKKLRG-EVQVPQTSL------- 129 (305)
T ss_dssp GGHHHHHTT--CSEEEEECCCGGGHHHHHHHHHHTTS-EESSCCHHHHHHHTSHHHHHHHHTT-TSCCCCEES-------
T ss_pred HHHHHHHHh--cCEEEEEccCCcHHHHHHHHHHHhcC-CccCCCHHHHHHhcCHHHHHHHHHh-CCCCCCEec-------
Confidence 456666654 555444 3332111234555666667 7899999999999999999999999 999999874
Q ss_pred HHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccEE
Q psy15251 149 ILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNYV 228 (720)
Q Consensus 149 e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~v 228 (720)
.+++||+|+||..|+||+|++++++ .+..+++|+||+ ++|+++.++.++ .+.
T Consensus 130 ------~~~~~P~vvKP~~g~gs~Gv~~v~~-------------------~~~~~lvEe~I~-G~e~sv~v~~g~--~~~ 181 (305)
T 3df7_A 130 ------RPLDCKFIIKPRTACAGEGIGFSDE-------------------VPDGHIAQEFIE-GINLSVSLAVGE--DVK 181 (305)
T ss_dssp ------SCCSSSEEEEESSCC----CBCCSS-------------------CCTTEEEEECCC-SEEEEEEEEESS--SEE
T ss_pred ------ccCCCCEEEEeCCCCCCCCEEEEec-------------------CCCCEEEEeccC-CcEEEEEEEeCC--eEE
Confidence 2579999999999999999999998 268999999999 599999999843 444
Q ss_pred EEEeeeccccccceeEEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCcEEEEEecCCCCcccccc
Q psy15251 229 YLYERDCSVQRRHQKIIEEAPAPGISSEFRSRLGSTGVQVARAV-RYHNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVS 307 (720)
Q Consensus 229 ~~~~r~~s~~r~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~al-g~~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~ 307 (720)
.+.... .............|+ .++++..+++.+.+.++++++ |++|.+++||+++ |++||+|+|||++++....
T Consensus 182 ~~~~~~-~~~~~~~~~g~~~p~-~l~~~~~~~i~~~a~~~~~~l~g~~G~~~vD~~~~---~~~~viEiNpR~~~~~~~~ 256 (305)
T 3df7_A 182 CLSVNE-QIINNFRYAGAVVPA-RISDEVKREVVEEAVRAVECVEGLNGYVGVDIVYS---DQPYVIEINARLTTPVVAF 256 (305)
T ss_dssp EEEEEE-EEEETTEEEEEEESC-CCCHHHHHHHHHHHHHHHTTSTTCCEEEEEEEEES---SSEEEEEEESSCCGGGGGH
T ss_pred EEEEee-EeccCceeccccccC-CCCHHHHHHHHHHHHHHHHHcCCCcCceEEEEEEC---CCEEEEEEcCCCCCCHHHH
Confidence 433211 111111122345676 589999999999999999999 9999999999997 5699999999999887777
Q ss_pred cccccCcHHHHHHHH
Q psy15251 308 EMITGVDLVQWQLMV 322 (720)
Q Consensus 308 e~~tGvdl~~~~l~~ 322 (720)
+.++|+|+.++++++
T Consensus 257 ~~~~G~~~~~~~~~~ 271 (305)
T 3df7_A 257 SRAYGASVADLLAGG 271 (305)
T ss_dssp HHHHSCCHHHHHTTC
T ss_pred HHHHCCCHHHHHHhc
Confidence 888999999999988
No 59
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=99.86 E-value=2.5e-21 Score=205.43 Aligned_cols=281 Identities=12% Similarity=0.049 Sum_probs=183.0
Q ss_pred EEEEEcCc--------HHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccE-EEEeCCCCCcccccC--HHHHHHHHHH
Q psy15251 10 SILIANRG--------EIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADE-AYRLEGKSSLDTYLN--QAKILDIAVR 78 (720)
Q Consensus 10 ~iLI~~~G--------~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~-~~~i~~~~~~~~~~~--~~~i~~~a~~ 78 (720)
||+|+..+ ..+..++++++++|++++.++.+..........++. .+.+... ...+.. .+.+ ...
T Consensus 3 ~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~ 77 (316)
T 1gsa_A 3 KLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVKQN--YEEWFSFVGEQD---LPL 77 (316)
T ss_dssp EEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGGEEEETTEEEEEEEEEEECSC--SSCCEEEEEEEE---EEG
T ss_pred eEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchhHeEEECCeEEEEEeeeEeccC--cccceeccCccc---ccc
Confidence 67777766 357889999999999999986542211110101221 1212110 011111 0000 111
Q ss_pred cCCCEEEeCCCCCc--cc---HHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHH
Q psy15251 79 SQCQAIHPGYGFLS--EN---AEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQ 153 (720)
Q Consensus 79 ~~~daI~pg~g~ls--E~---~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~ 153 (720)
.++|+|++..+... |. ..+.+.++..|++++ ++++++..+.||..++++++ |+|++.. +.+.+++.++
T Consensus 78 ~~~d~v~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~dK~~~~~~l~----~~P~t~~--~~~~~~~~~~ 150 (316)
T 1gsa_A 78 ADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIV-NKPQSLRDCNEKLFTAWFSD----LTPETLV--TRNKAQLKAF 150 (316)
T ss_dssp GGSSEEEECCCCCCCHHHHHHHHHHHHHHHTTCEEE-SCHHHHHHCCTTGGGGGGTT----TSCCEEE--ESCHHHHHHH
T ss_pred ccCCEEEEecCCCCchhhHHHHHHHHHHHHcCCeEe-cCHHHHHhhhhHHHHHhhhh----cCCCeEE--eCCHHHHHHH
Confidence 35899998764321 11 245666778999876 78999999999999999988 9999987 7889999999
Q ss_pred HHHhCCcEEEeecCCCCCcceEEeC-CHHHHHHHHHHHHHHHHhcCCCCcEEEeccccC--CceEEEEEEEcccccEEE-
Q psy15251 154 AERIGYPLMIKAVRGGGGKGMRIVR-DSANFLAQLRSAQRESQSAFNDSKVLLEKYIQS--PRHIEVQIIGDRYGNYVY- 229 (720)
Q Consensus 154 ~~~ig~PvvvKp~~g~Gg~Gv~~v~-~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g--~~~~~v~v~~d~~G~~v~- 229 (720)
++++| |+|+||..|+||+|+++++ +.+++..+++.+.. .+..++++|+||++ +.++++.++ + |+++.
T Consensus 151 ~~~~~-p~vvKP~~g~~g~Gv~~v~~~~~~l~~~~~~~~~-----~~~~~~lvqe~i~~~~~~~~~v~~~--~-g~~~~~ 221 (316)
T 1gsa_A 151 WEKHS-DIILKPLDGMGGASIFRVKEGDPNLGVIAETLTE-----HGTRYCMAQNYLPAIKDGDKRVLVV--D-GEPVPY 221 (316)
T ss_dssp HHHHS-SEEEECSSCCTTTTCEEECTTCTTHHHHHHHHTT-----TTTSCEEEEECCGGGGGCEEEEEEE--T-TEECSE
T ss_pred HHHcC-CEEEEECCCCCcccEEEecCChHHHHHHHHHHHh-----cCCceEEEecccCCCCCCCEEEEEE--C-CEEeee
Confidence 98999 9999999999999999998 88898877765321 22478999999997 355555444 2 45554
Q ss_pred EEeeeccc--cccc---eeEEEEcCCCCCCHHHHHHHHHHHHHHHH---HcCCcceeEEEEEEeCCCCcEEEEEecCCCC
Q psy15251 230 LYERDCSV--QRRH---QKIIEEAPAPGISSEFRSRLGSTGVQVAR---AVRYHNAGTVEFIMDPSSGEFYFMEMNTRLQ 301 (720)
Q Consensus 230 ~~~r~~s~--~r~~---~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~---alg~~G~~~vEf~~~~~~g~~~~iEiNpR~~ 301 (720)
...|.... .+.+ .... .|. .+++ ++.+.+.++++ ++|+ +.+.+||+ |. ||||+|+|.+
T Consensus 222 ~~~r~~~~~~~~~~~~~gg~~--~~~-~~~~----~~~~~a~~~~~~l~~~g~-~~~~vD~~-----g~-~~iEvN~r~~ 287 (316)
T 1gsa_A 222 CLARIPQGGETRGNLAAGGRG--EPR-PLTE----SDWKIARQIGPTLKEKGL-IFVGLDII-----GD-RLTEINVTSP 287 (316)
T ss_dssp EEEEECCSSCSCCCGGGTCEE--EEE-ECCH----HHHHHHHHHHHHHHHTTC-CEEEEEEE-----TT-EEEEEECSSC
T ss_pred EEEEeCCCCCceeEEccCCcc--ccC-CCCH----HHHHHHHHHHHHHHhCCC-cEEEEEec-----CC-EEEEEcCCCC
Confidence 33332110 0110 1111 233 2444 34455555554 4677 67789998 43 8999999975
Q ss_pred cccccccccccCcHHHHHHHHHcC
Q psy15251 302 VEHPVSEMITGVDLVQWQLMVASG 325 (720)
Q Consensus 302 ~~~~~~e~~tGvdl~~~~l~~a~G 325 (720)
.....++..+|+|+.+..++...+
T Consensus 288 ~~~~~~~~~~g~~~~~~~~~~~~~ 311 (316)
T 1gsa_A 288 TCIREIEAEFPVSITGMLMDAIEA 311 (316)
T ss_dssp CCHHHHHHHSSCCHHHHHHHHHHH
T ss_pred cchHHHHHhhCcCHHHHHHHHHHH
Confidence 444555677899999999887754
No 60
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=99.84 E-value=8.5e-21 Score=202.71 Aligned_cols=240 Identities=16% Similarity=0.235 Sum_probs=167.2
Q ss_pred CEEEEEcCc-HHHHHHHHHHHHcCCcE--EEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 9 DSILIANRG-EIACRIMRTAKKMGIRV--VSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 9 ~~iLI~~~G-~~a~~iira~~~~G~~~--v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
.+|+|+... .....++++++++|+++ +.++.+. + +. ... ..+|+++
T Consensus 12 m~i~il~~~~~~s~~l~~al~~~G~~v~~~~~d~~~--~------------~~-------~~~----------~~~d~v~ 60 (324)
T 1z2n_X 12 VSLFIWLPESKQKTLFISTKNHTQFELNNIIFDVTL--S------------TE-------LPD----------KEPNAII 60 (324)
T ss_dssp EEEEEECCHHHHHHHBSSCCSEEEEEETTEEEEEEE--E------------SS-------CCS----------SCCSEEE
T ss_pred EEEEEEEchhhhhhhHHHHHHhcCcEEEEEEecCCC--C------------cc-------ccC----------CCceEEE
Confidence 378887642 33337888899999998 8885421 0 00 000 1578888
Q ss_pred eCCCCCcccHHHHHHHHH-----CCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHh--C
Q psy15251 86 PGYGFLSENAEFANAVEG-----NRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERI--G 158 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~-----~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~i--g 158 (720)
+.... +...+...++. .|++++ ++++++..+.||..++++|+++|||+|++.. +.+.+++.+++++. +
T Consensus 61 ~~~~~--~~~~~~~~l~~~~~~~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gi~~P~~~~--~~~~~~~~~~~~~~~~~ 135 (324)
T 1z2n_X 61 TKRTH--PVGKMADEMRKYEKDHPKVLFL-ESSAIHDMMSSREEINALLIKNNIPIPNSFS--VKSKEEVIQLLQSKQLI 135 (324)
T ss_dssp ECCSC--SSSHHHHHHHHHHHHCTTSEEE-TCHHHHHHHTBHHHHHHHHHHTTCCCSCEEE--ESSHHHHHHHHHTTCSC
T ss_pred Eeccc--hHHHHHHHHHHHHHhCCCCeEe-CCHHHHHHHhCHHHHHHHHHHCCCCCCCEEE--eCCHHHHHHHHHHcCCC
Confidence 76532 21223333333 788864 8999999999999999999999999999987 78889988888875 4
Q ss_pred CcEEEeecCCCCC---cceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccC-CceEEEEEEEcccccEEEEEeee
Q psy15251 159 YPLMIKAVRGGGG---KGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQS-PRHIEVQIIGDRYGNYVYLYERD 234 (720)
Q Consensus 159 ~PvvvKp~~g~Gg---~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g-~~~~~v~v~~d~~G~~v~~~~r~ 234 (720)
||+|+||..|.|| +|+.++++.+++.. + +.++++|+||++ ++++++.+++ |+++....+.
T Consensus 136 ~P~vvKP~~g~g~~~s~gv~~v~~~~~l~~------------~-~~~~lvqe~i~~~g~~~~v~v~g---~~~~~~~~~~ 199 (324)
T 1z2n_X 136 LPFIVKPENAQGTFNAHQMKIVLEQEGIDD------------I-HFPCLCQHYINHNNKIVKVFCIG---NTLKWQTRTS 199 (324)
T ss_dssp SSEEEEESBCSSSSGGGEEEEECSGGGGTT------------C-CSSEEEEECCCCTTCEEEEEEET---TEEEEEEECC
T ss_pred CCEEEeeCCCCCCccceeeEEEeCHHHHhh------------c-CCCEEEEEccCCCCcEEEEEEEC---CEEEEEEecC
Confidence 9999999999999 99999999888642 1 578999999985 5777777764 3444442221
Q ss_pred cc-ccc-----------------------------------cceeEEEEcCCCCCCHHHH-HHHHHHHHHHHHHcCCcce
Q psy15251 235 CS-VQR-----------------------------------RHQKIIEEAPAPGISSEFR-SRLGSTGVQVARAVRYHNA 277 (720)
Q Consensus 235 ~s-~~r-----------------------------------~~~k~~e~~Pa~~l~~~~~-~~l~~~a~~i~~alg~~G~ 277 (720)
.+ +.. .........+. .+.... +++.+.+.++++++|+. .
T Consensus 200 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~a~~~~~~lg~~-~ 276 (324)
T 1z2n_X 200 LPNVHRCGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILEDPI--LLNLTSEAEMRDLAYKVRCALGVQ-L 276 (324)
T ss_dssp CCCCCCSSCCEEEEETTBGGGGGGSCTTSSCHHHHHHHHTTTTCCCBCSCTT--TTTSCCHHHHHHHHHHHHHHHTCS-E
T ss_pred cccccCCCccceeeccccchhhhccccccccccccccccccchhhccccCCc--cccCCCHHHHHHHHHHHHHHhCCc-E
Confidence 00 000 00000000111 122222 68999999999999996 7
Q ss_pred eEEEEEEeCCCCcEEEEEecCCCCcc
Q psy15251 278 GTVEFIMDPSSGEFYFMEMNTRLQVE 303 (720)
Q Consensus 278 ~~vEf~~~~~~g~~~~iEiNpR~~~~ 303 (720)
+++||++++++|++||||||||++..
T Consensus 277 ~~vD~~~~~~~g~~~vlEvN~~Pg~~ 302 (324)
T 1z2n_X 277 CGIDFIKENEQGNPLVVDVNVFPSYG 302 (324)
T ss_dssp EEEEEECGGGCSSCEEEEEEESCCTT
T ss_pred EeeEEEEEcCCCCEEEEEEcCCCCcC
Confidence 89999998335889999999999743
No 61
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.83 E-value=1.9e-21 Score=226.81 Aligned_cols=241 Identities=18% Similarity=0.164 Sum_probs=183.5
Q ss_pred cCHHHHHHHHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEe-------CCCHHHHHHhcCHHHHHHHHHHCCCCCCCc
Q psy15251 67 LNQAKILDIAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFV-------GPSSEAIRNMGIKSTSKEIMIKAEVPVIPG 139 (720)
Q Consensus 67 ~~~~~i~~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~-------Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~ 139 (720)
.+.+.|+++|++.++|+++.+ ++..|+.++...++.++ ||+..++..++||..+|++|+++|||+|++
T Consensus 433 ~st~~Iv~~A~~~gid~~vlg-----~e~~l~~lg~~~~~~~ig~~~~t~~~s~~aa~~~~DK~~tk~lL~~~GIPvP~~ 507 (757)
T 3ln7_A 433 LSTQALLFDVIQKGIHTEILD-----ENDQFLCLKYGDHIEYVKNGNMTSHDSYISPLIMENKVVTKKVLQKAGFNVPQS 507 (757)
T ss_dssp HHHHHHHHHHHHHTCEEEEEE-----TTTTEEEEEETTEEEEEETTTBCSSSBSHHHHHHHHSHHHHHHHHHHTCCCCCE
T ss_pred CCHHHHHHHHHHhCCCEEEEC-----CCHHHHHhcccccceeeccCccCCCCHHHHHHHhcCHHHHHHHHHHCCcCCCCE
Confidence 567899999999999999644 33444444444444444 467799999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHH-HHhCCcEEEeecCCCCCcceEEe----CCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCce
Q psy15251 140 YHGEDQNEEILMEQA-ERIGYPLMIKAVRGGGGKGMRIV----RDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRH 214 (720)
Q Consensus 140 ~~~~~~s~~e~~~~~-~~ig~PvvvKp~~g~Gg~Gv~~v----~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~ 214 (720)
.. +.+.+++.+++ +.+|||+||||..|++|+||+++ .+.+++.++++.+... +..++||+||+| +|
T Consensus 508 ~~--~~~~~ea~~~~~~~~g~PvVVKP~~g~~G~GV~iv~~~v~~~eel~~al~~a~~~------~~~vlVEefI~G-~E 578 (757)
T 3ln7_A 508 VE--FTSLEKAVASYALFENRAVVIKPKSTNYGLGITIFQQGVQNREDFAKALEIAFRE------DKEVMVEDYLVG-TE 578 (757)
T ss_dssp EE--ESCHHHHHHGGGGSSSSCEEEEESSCSTTTTCEECSSCCCCHHHHHHHHHHHHHH------CSSEEEEECCCS-EE
T ss_pred EE--ECCHHHHHHHHHHhcCCCEEEEeCCCCCCCCeEEecCCCCCHHHHHHHHHHHHhc------CCcEEEEEcCCC-cE
Confidence 87 88999887766 77899999999999999999999 8999999999887643 678999999995 99
Q ss_pred EEEEEEEcccccEEEEEeeeccc------------------c-cc---ce------------------------------
Q psy15251 215 IEVQIIGDRYGNYVYLYERDCSV------------------Q-RR---HQ------------------------------ 242 (720)
Q Consensus 215 ~~v~v~~d~~G~~v~~~~r~~s~------------------~-r~---~~------------------------------ 242 (720)
++|.++++ +++.+..|.... . ++ |.
T Consensus 579 i~v~Vlgg---kvvaai~R~p~~VvGDG~~ti~eLi~~~n~~p~rg~~~~~~l~~I~ld~~~~~~L~~~g~~~d~Vp~~G 655 (757)
T 3ln7_A 579 YRFFVLGD---ETLAVLLRVPANVVGDSVHSVAELVAMKNDHPLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKD 655 (757)
T ss_dssp EEEEEETT---EEEEEEEECCSEEEGGGCCCHHHHHHHHHTSTTEECSSSSSEECCCCCHHHHHHHHHHTCCSSSCCCSS
T ss_pred EEEEEECC---EEEEEEEEecccccCCCcccHHHHHHhhcccccccccccCccccccccHHHHHHHHHcCCCccccCCCC
Confidence 99999864 777777664210 0 00 00
Q ss_pred -eEEE--------EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC-------CCCcEEEEEecCCCCcc-cc
Q psy15251 243 -KIIE--------EAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDP-------SSGEFYFMEMNTRLQVE-HP 305 (720)
Q Consensus 243 -k~~e--------~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~-------~~g~~~~iEiNpR~~~~-~~ 305 (720)
.+.- ++-+...++.+.+++.+.|.++++++|+ ..+.||++.+. ..+.+.+||+|++++-. |.
T Consensus 656 e~v~L~~~~Nls~GG~~~dvtd~i~p~~~~~a~~aa~~lGl-~~~GvDli~~di~~p~~~~~~~~~iiEvN~~P~~~~h~ 734 (757)
T 3ln7_A 656 QLVQLRANSNISTGGDSIDMTDEMHESYKQLAVGITKAMGA-AVCGVDLIIPDLKQPATPNLTSWGVIEANFNPMMMMHI 734 (757)
T ss_dssp CEEECCSSCCGGGTCCEEECTTTSCHHHHHHHHHHHHHHTC-SEEEEEEEESCSSSCCCSSTTTCEEEEEESSCCHHHHH
T ss_pred CEEEeecccccccCccceeccccCCHHHHHHHHHHHHHhCC-CEEEEEEEecCccccccccCCCeEEEEEcCCcchhhhh
Confidence 0000 0001123456678899999999999999 58999999872 12468999999999944 44
Q ss_pred cccccccCcHHHHHHHHHcC
Q psy15251 306 VSEMITGVDLVQWQLMVASG 325 (720)
Q Consensus 306 ~~e~~tGvdl~~~~l~~a~G 325 (720)
..-..+|.|+....++....
T Consensus 735 ~p~~g~~~~v~~~ii~~lfp 754 (757)
T 3ln7_A 735 FPYAGKSRRLTQNVIKMLFP 754 (757)
T ss_dssp SCSSSCCCCCHHHHHHHHCT
T ss_pred ccccCCCCchHHHHHHHhcC
Confidence 44346799999999987754
No 62
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=99.79 E-value=2.3e-19 Score=183.23 Aligned_cols=176 Identities=13% Similarity=0.173 Sum_probs=139.2
Q ss_pred cCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecCC-----CCCcceEE-eCCHHHHHHHHHHHHHH
Q psy15251 120 GIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVRG-----GGGKGMRI-VRDSANFLAQLRSAQRE 193 (720)
Q Consensus 120 ~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~g-----~Gg~Gv~~-v~~~~el~~~~~~~~~~ 193 (720)
.||..+|++|+++|||+|++.. +.+.+++.++++++|||+|+||..+ ++|.|+.+ +++.+|+.++++.+...
T Consensus 20 l~k~~~k~ll~~~GIp~p~~~~--~~~~~ea~~~a~~lg~PvvvKp~~~~~~~r~~~gGv~~~v~~~~el~~a~~~~~~~ 97 (238)
T 1wr2_A 20 MVEYEAKQVLKAYGLPVPEEKL--AKTLDEALEYAKEIGYPVVLKLMSPQILHKSDAKVVMLNIKNEEELKKKWEEIHEN 97 (238)
T ss_dssp ECHHHHHHHHHTTTCCCCCCEE--ESSHHHHHHHHHHHCSSEEEEEECTTCCCHHHHTCEEEEECSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCcCCCCeEE--eCCHHHHHHHHHHhCCCEEEEEccCCCCcCCccCCEEEeCCCHHHHHHHHHHHHHh
Confidence 5999999999999999999987 8899999999999999999999999 77888998 79999999999998877
Q ss_pred HHhcCC---CCcEEEeccccCCceEEEEEEEcc-cccEEEEEeeeccccccceeEEEEcCCCCCCHHHHHHHHHHHHHHH
Q psy15251 194 SQSAFN---DSKVLLEKYIQSPRHIEVQIIGDR-YGNYVYLYERDCSVQRRHQKIIEEAPAPGISSEFRSRLGSTGVQVA 269 (720)
Q Consensus 194 ~~~~f~---~~~~lvEeyI~g~~~~~v~v~~d~-~G~~v~~~~r~~s~~r~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~ 269 (720)
....++ ...++||+|+++++|+++.++.|. .|.++.++.....+...........| ++++...+|.+.+.++.
T Consensus 98 ~~~~~~~~~~~~vlVEe~i~~g~E~~v~v~~d~~~g~v~~~~~Gg~~iE~~~d~~~~~~P---l~~~~~~~~~~~~~~~~ 174 (238)
T 1wr2_A 98 AKKYRPDAEILGVLVAPMLKPGREVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVP---ITEKDARKMIQEIKAYP 174 (238)
T ss_dssp HHHHCTTCCCCEEEEEECCCCCEEEEEEEEEETTTEEEEEEEECSTTHHHHCCCEEEESS---CCHHHHHHHHHTSTTHH
T ss_pred hhhhCCCCccceEEEEECCCCCeEEEEEEEeCCCCCcEEEEecCCceeeeecceeeecCC---CCHHHHHHHHHHHHHHH
Confidence 654444 268999999998899999999997 67776665321122211222233334 89999999999999999
Q ss_pred HHcCCcceeEEEE-------------EEeCCCCcEEEEEecCCCC
Q psy15251 270 RAVRYHNAGTVEF-------------IMDPSSGEFYFMEMNTRLQ 301 (720)
Q Consensus 270 ~alg~~G~~~vEf-------------~~~~~~g~~~~iEiNpR~~ 301 (720)
..+||+|...+++ +.+ .++.++++||||++-
T Consensus 175 ~~~g~~G~~~~d~~~l~~~l~~l~~~~~~-~~~~~~~lEINPl~~ 218 (238)
T 1wr2_A 175 ILAGARGEEPADIDAIVDMLLKVSKLVDD-LKDYIKEMDLNPVFV 218 (238)
T ss_dssp HHHCC--CCCBCHHHHHHHHHHHHHHHHH-TTTTEEEEEEEEEEE
T ss_pred HhcCCCCCChhhHHHHHHHHHHHHHHHHc-CCCCeEEEeccCeEE
Confidence 9999999755552 334 333399999999884
No 63
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.77 E-value=1.4e-19 Score=211.60 Aligned_cols=243 Identities=16% Similarity=0.163 Sum_probs=175.5
Q ss_pred cCHHHHHHHHHHcCCCEEEeCC--CCCcccHHHH-HHHHHCCCeEeCC-CHHHHHHhcCHHHHHHHHHHCCCCCCCcccC
Q psy15251 67 LNQAKILDIAVRSQCQAIHPGY--GFLSENAEFA-NAVEGNRLIFVGP-SSEAIRNMGIKSTSKEIMIKAEVPVIPGYHG 142 (720)
Q Consensus 67 ~~~~~i~~~a~~~~~daI~pg~--g~lsE~~~~a-~~~~~~gl~~~Gp-~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~ 142 (720)
.+.+.|+++|++.++++++.+. .++....... ..+....+ .|+ +..++..++||..+|++|+++|||+|++..
T Consensus 428 ~S~~~l~~aA~~~Gi~v~vidp~~~l~~l~~~~~~~~~~~g~i--tg~~~~~a~~~~~DK~~tk~lL~~~GIPvP~~~~- 504 (750)
T 3ln6_A 428 LSTQLLLFDVIQKGVNFEVLDEQDQFLKLWHNSHIEYVKNGNM--TSKDNYIVPLAMANKVVTKKILDEKHFPTPFGDE- 504 (750)
T ss_dssp HHHHHHHHHHHHHTCEEEESCSSSCEEEEEETTEEEEEETTTB--CTTSCTHHHHHTTTSHHHHHHHHHTTCCCCCCCC-
T ss_pred ccHHHHHHHHHhCCCCEEEECCCchHhhhccCCCcEEEecCCe--eCCCHHHHHHHHhCHHHHHHHHHHCCcCCCCEEE-
Confidence 3567899999999999866443 3443221100 00001122 243 345677788999999999999999999987
Q ss_pred CCCCHHHHHHHH-HHhCCcEEEeecCCCCCcceEEeC---CHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEE
Q psy15251 143 EDQNEEILMEQA-ERIGYPLMIKAVRGGGGKGMRIVR---DSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQ 218 (720)
Q Consensus 143 ~~~s~~e~~~~~-~~ig~PvvvKp~~g~Gg~Gv~~v~---~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~ 218 (720)
+.+.+++.+++ +.+|||+||||..|++|+||.+++ +.+++.++++.+... +..++||+||+ |+|++|.
T Consensus 505 -~~~~~ea~~~~~~~~g~PvVVKP~~G~~G~GV~iv~~~~s~eel~~a~~~~~~~------~~~vlVEefI~-G~E~~v~ 576 (750)
T 3ln6_A 505 -FTDRKEALNYFSQIQDKPIVVKPKSTNFGLGISIFKTSANLASYEKAIDIAFTE------DSAILVEEYIE-GTEYRFF 576 (750)
T ss_dssp -EETTTTHHHHHHHSSSSCEEEEETTCCSSSSCEEESSCCCHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEE
T ss_pred -ECCHHHHHHHHHHhcCCcEEEEeCCCCCCCCEEEEeCCCCHHHHHHHHHHHHhh------CCcEEEEeccC-CCEEEEE
Confidence 77888887777 678999999999999999999998 899999999887643 68999999999 5999999
Q ss_pred EEEcccccEEEEEeeeccc------------------c--c--cceeE------------------------------EE
Q psy15251 219 IIGDRYGNYVYLYERDCSV------------------Q--R--RHQKI------------------------------IE 246 (720)
Q Consensus 219 v~~d~~G~~v~~~~r~~s~------------------~--r--~~~k~------------------------------~e 246 (720)
++++ +++.+..|.... . | .|.+. +.
T Consensus 577 Vvgg---~vvaa~~r~p~~v~GdG~~tI~eLI~~~n~dp~rg~~~~~~l~~i~~d~~~~~~l~~~g~~~~~V~~~Ge~v~ 653 (750)
T 3ln6_A 577 VLEG---DCIAVLLRVAANVVGDGIHTISQLVKLKNQNPLRGYDHRSPLEVIELGEVEQLMLEQQGYTVNSIPPEGTKIE 653 (750)
T ss_dssp EETT---EEEEEEEEECCEEECCTTCCHHHHHHHHTTCTTEESSSCCSEECCCCCHHHHHHHHHTTCCSSCCCCTTCEEE
T ss_pred EECC---EEEEEEEEecceEecCCccCHHHHHHhhccCccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEE
Confidence 9864 676665553211 0 0 00000 00
Q ss_pred EcC---------CCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC-------CCCcEEEEEecCCCCcc-cccccc
Q psy15251 247 EAP---------APGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDP-------SSGEFYFMEMNTRLQVE-HPVSEM 309 (720)
Q Consensus 247 ~~P---------a~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~-------~~g~~~~iEiNpR~~~~-~~~~e~ 309 (720)
-.. +...++.+.+++.+.|.++++++|+. .+.||++.+. +.+.+++||+|++++-. |..-..
T Consensus 654 L~~~~Nls~Gg~~~d~td~i~p~~~~~a~~aa~~igl~-~~GvDli~~di~~~~~~~~~~~~iiEvN~~pg~~~h~~p~~ 732 (750)
T 3ln6_A 654 LRRNSNISTGGDSIDVTNTMDPTYKQLAAEMAEAMGAW-VCGVDLIIPNATQAYSKDKKNATCIELNFNPLMYMHTYCQE 732 (750)
T ss_dssp SCSSCCTTTTCEEEECTTTSCHHHHHHHHHHHHHHTCS-SCEEEEEESCSSSCCCTTTTCCEEEEEESSCCCHHHHSCSB
T ss_pred EeecccccCCCceeeccccCCHHHHHHHHHHHHHhCCC-eEEEEEEecCccccccccCCCeEEEEEcCCcchhhhcCccc
Confidence 000 00134456788999999999999984 8999999982 14568999999999954 544445
Q ss_pred cccCcHHHHHHHHHc
Q psy15251 310 ITGVDLVQWQLMVAS 324 (720)
Q Consensus 310 ~tGvdl~~~~l~~a~ 324 (720)
.+|.|+.+..++...
T Consensus 733 g~~~~v~~~ii~~lf 747 (750)
T 3ln6_A 733 GPGQSITPRILAKLF 747 (750)
T ss_dssp SCCCCCHHHHHHHHC
T ss_pred CCCCcHHHHHHHHhC
Confidence 679999999888764
No 64
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=99.73 E-value=1.6e-16 Score=166.87 Aligned_cols=218 Identities=16% Similarity=0.132 Sum_probs=157.3
Q ss_pred CCCEEEeCCCCCc--cc---HHHHHHHHHCCCeEeCCCHHHHHHhcCH----HHHHHHHHHCCC---CCCCcccCCCCCH
Q psy15251 80 QCQAIHPGYGFLS--EN---AEFANAVEGNRLIFVGPSSEAIRNMGIK----STSKEIMIKAEV---PVIPGYHGEDQNE 147 (720)
Q Consensus 80 ~~daI~pg~g~ls--E~---~~~a~~~~~~gl~~~Gp~~~~i~~~~DK----~~~r~~l~~~Gv---p~p~~~~~~~~s~ 147 (720)
..|++++..+... ++ -.+.+.++..|++.+ ++++++..++|| ..+.++++++|+ |.||... ..+.
T Consensus 68 ~~D~vi~R~~~~~~~~~~~~r~vl~~le~~Gvpvi-N~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~~~--~~~~ 144 (309)
T 1i7n_A 68 RPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSI-NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTY--YPNH 144 (309)
T ss_dssp CCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEE--ESSG
T ss_pred cCCEEEEecccccccccchHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCCEEe--eCCh
Confidence 5799998775332 21 355667999999988 899999999999 667788899998 8666543 2333
Q ss_pred HHHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccE
Q psy15251 148 EILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNY 227 (720)
Q Consensus 148 ~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~ 227 (720)
.+ ..+..|||+|+||..|+.|+||.++++.+++.+.++..... +..+++||||+.++.+.+.++++ ++
T Consensus 145 ~~---~~~~~g~PvVvK~~~Gs~G~GV~lv~~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VvGg---~v 212 (309)
T 1i7n_A 145 RE---MLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALT------QTYATAEPFIDAKYDIRVQKIGN---NY 212 (309)
T ss_dssp GG---GSSCCCSSEEEEESSCSTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETT---EE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeecCCCceEEEEEECC---EE
Confidence 33 34568999999999999999999999999999888755432 46788999999788888888875 56
Q ss_pred EEEEeeecc-cccccee--EEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCcEEEEEecC--CCC
Q psy15251 228 VYLYERDCS-VQRRHQK--IIEEAPAPGISSEFRSRLGSTGVQVARAV-RYHNAGTVEFIMDPSSGEFYFMEMNT--RLQ 301 (720)
Q Consensus 228 v~~~~r~~s-~~r~~~k--~~e~~Pa~~l~~~~~~~l~~~a~~i~~al-g~~G~~~vEf~~~~~~g~~~~iEiNp--R~~ 301 (720)
+....|.-+ -.+.+.. ..+ |. .++ +++.+.|.++++++ |+ +.+.||++.+ .+|.+|++|+|. -++
T Consensus 213 ~a~~Rr~~~g~wrtN~~~~~~e--~~-~l~----~e~~~la~~A~~a~gGl-di~GVDll~~-~~g~~~V~EVN~~~~P~ 283 (309)
T 1i7n_A 213 KAYMRTSISGNWKTNTGSAMLE--QI-AMS----DRYKLWVDACSEMFGGL-DICAVKAVHG-KDGKDYIFEVMDCSMPL 283 (309)
T ss_dssp EEEEEESSCTTTSCSCCCSSEE--EE-CCC----HHHHHHHHHHTTGGGCC-SEEEEEEEEE-TTSCEEEEEEECTTCCC
T ss_pred EEEEEEcCCCCCeecCCcceee--ec-CCC----HHHHHHHHHHHHHhCCC-CEEEEEEEEc-CCCCEEEEEECCCCCCC
Confidence 544332100 1111110 011 11 233 45788899999999 56 9999999999 788899999999 776
Q ss_pred cccccccccccCcHHHHHHHHH
Q psy15251 302 VEHPVSEMITGVDLVQWQLMVA 323 (720)
Q Consensus 302 ~~~~~~e~~tGvdl~~~~l~~a 323 (720)
-+ -++..++.++.+..++..
T Consensus 284 ~~--~~~~~~~~~ia~~ii~~~ 303 (309)
T 1i7n_A 284 IG--EHQVEDRQLITDLVISKM 303 (309)
T ss_dssp CS--SCHHHHHHHHHHHHHHHH
T ss_pred cc--chhhhhHHHHHHHHHHHH
Confidence 43 233345778777776543
No 65
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=99.71 E-value=3.1e-16 Score=166.47 Aligned_cols=220 Identities=15% Similarity=0.111 Sum_probs=160.5
Q ss_pred CCCEEEeCCCCCc--c---cHHHHHHHHHCCCeEeCCCHHHHHHhcCH----HHHHHHHHHCCC---CCCCcccCCCCCH
Q psy15251 80 QCQAIHPGYGFLS--E---NAEFANAVEGNRLIFVGPSSEAIRNMGIK----STSKEIMIKAEV---PVIPGYHGEDQNE 147 (720)
Q Consensus 80 ~~daI~pg~g~ls--E---~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK----~~~r~~l~~~Gv---p~p~~~~~~~~s~ 147 (720)
..|++++..+... + .-.+.+.++..|++.+ ++++++..++|| ..+.+++.++|+ |.+|... ..+.
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~Gvpvi-N~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~t~--~~~~ 161 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAV-NSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTF--FPNH 161 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEE-SCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCCEE--ESSS
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCceec-CCHHHHHhhCCchHHHHHHHHHHHHCCCCCCCCCCEEe--cCch
Confidence 6899999876422 2 2345667899999988 899999999999 777888899998 8666443 2222
Q ss_pred HHHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccE
Q psy15251 148 EILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNY 227 (720)
Q Consensus 148 ~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~ 227 (720)
.+ ..+.+|||+|+||..|+.|+||.++++.+++.+.++..... ...+++||||+.++.+.+.++++ ++
T Consensus 162 ~~---~~~~~g~PvVvK~~~Gs~G~GV~lve~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VVGg---~v 229 (344)
T 2p0a_A 162 KP---MVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMA------KTYATTEAFIDSKYDIRIQKIGS---NY 229 (344)
T ss_dssp TT---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETT---EE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeccCCCccEEEEEECC---EE
Confidence 22 34467999999999999999999999999999888655422 46788999999778888888875 56
Q ss_pred EEEEeeecc--cccc-ceeEEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCcEEEEEecC--CCC
Q psy15251 228 VYLYERDCS--VQRR-HQKIIEEAPAPGISSEFRSRLGSTGVQVARAV-RYHNAGTVEFIMDPSSGEFYFMEMNT--RLQ 301 (720)
Q Consensus 228 v~~~~r~~s--~~r~-~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~al-g~~G~~~vEf~~~~~~g~~~~iEiNp--R~~ 301 (720)
+....|--+ ...+ +.-..+..| ++ +++.+.+.++++++ |+ +.+.||++.+ .+|.+|++|+|. .++
T Consensus 230 va~~R~~~~g~wrtN~~~~~~e~~~---l~----~e~~~la~~Aa~a~gGl-di~GVDll~~-~~G~~~VlEVN~~~~P~ 300 (344)
T 2p0a_A 230 KAYMRTSISGNWKANTGSAMLEQVA---MT----ERYRLWVDSCSEMFGGL-DICAVKAVHS-KDGRDYIIEVMDSSMPL 300 (344)
T ss_dssp EEEEEEESSSCSSTTSSSEEEEEEC---CC----HHHHHHHHHHTTGGGCC-SEEEEEEEEE-TTSCEEEEEEECTTCCC
T ss_pred EEEEEecCCCCCeecCCceEEEeeC---CC----HHHHHHHHHHHHHhCCC-CEEEEEEEEc-CCCCEEEEEEcCCCCCc
Confidence 654332100 1111 111112222 33 46788899999999 56 8999999999 788899999999 665
Q ss_pred cccccccccccCcHHHHHHHHHcC
Q psy15251 302 VEHPVSEMITGVDLVQWQLMVASG 325 (720)
Q Consensus 302 ~~~~~~e~~tGvdl~~~~l~~a~G 325 (720)
-+ -++..++.|+.+..++...-
T Consensus 301 ~~--~~~~~~~~~Ia~~ii~~i~~ 322 (344)
T 2p0a_A 301 IG--EHVEEDRQLMADLVVSKMSQ 322 (344)
T ss_dssp CG--GGHHHHHHHHHHHHHHHHHT
T ss_pred cc--chhhhHHHHHHHHHHHHHHH
Confidence 32 34456788999999887644
No 66
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=99.71 E-value=4.4e-16 Score=167.90 Aligned_cols=218 Identities=15% Similarity=0.116 Sum_probs=158.4
Q ss_pred CCCEEEeCCCCCc--c---cHHHHHHHHHCCCeEeCCCHHHHHHhcCH----HHHHHHHHHCCC---CCCCcccCCCCCH
Q psy15251 80 QCQAIHPGYGFLS--E---NAEFANAVEGNRLIFVGPSSEAIRNMGIK----STSKEIMIKAEV---PVIPGYHGEDQNE 147 (720)
Q Consensus 80 ~~daI~pg~g~ls--E---~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK----~~~r~~l~~~Gv---p~p~~~~~~~~s~ 147 (720)
..|++++..+... + .-.+.+.++..|++.+ ++++++..++|| ..+-++++++|+ |.++... ..+.
T Consensus 180 ~~DaviiR~~~~~~~~~~~yr~vlr~lE~~Gvpvi-Ns~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~t~--~~~~ 256 (422)
T 1pk8_A 180 KPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSV-NSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTF--YPNH 256 (422)
T ss_dssp CCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEE--ESSG
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCceEe--cCch
Confidence 5799998875332 2 2355677899999988 899999999999 567788889998 8555543 2232
Q ss_pred HHHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCCceEEEEEEEcccccE
Q psy15251 148 EILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSPRHIEVQIIGDRYGNY 227 (720)
Q Consensus 148 ~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~~ 227 (720)
.+ +.+..|||+|+||..|+.|+||.++++.++++..++..... ...+++||||+.++++.|.++++ ++
T Consensus 257 ~~---~i~~~g~PvVvKp~~GS~G~GV~lve~~~~l~~ii~~~~~~------~~~~~vQEfI~~g~DIRv~VVGg---~v 324 (422)
T 1pk8_A 257 KE---MLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALT------KTYATAEPFIDAKYDVRVQKIGQ---NY 324 (422)
T ss_dssp GG---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TSCEEEEECCCEEEEEEEEEETT---EE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEeCCHHHHHHHHHHHhcc------CceEEEEeecCCCceEEEEEECC---EE
Confidence 22 33568999999999999999999999999999888765432 46789999999788888888875 56
Q ss_pred EEEEeee-ccccccc--eeEEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCcEEEEEecC--CCC
Q psy15251 228 VYLYERD-CSVQRRH--QKIIEEAPAPGISSEFRSRLGSTGVQVARAV-RYHNAGTVEFIMDPSSGEFYFMEMNT--RLQ 301 (720)
Q Consensus 228 v~~~~r~-~s~~r~~--~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~al-g~~G~~~vEf~~~~~~g~~~~iEiNp--R~~ 301 (720)
+...-|- ..-.+-+ .-..+..+ ++ +++.+.+.++++++ |+ +.+.||++.+ ++|.+|++|+|. .++
T Consensus 325 va~~Rr~~~g~WrtNvg~g~~e~i~---lt----~e~~elA~kAaka~gGl-diaGVDlL~s-~dG~~~VlEVN~s~~P~ 395 (422)
T 1pk8_A 325 KAYMRTSVSGNWKTNTGSAMLEQIA---MS----DRYKLWVDTCSEIFGGL-DICAVEALHG-KDGRDHIIEVVGSSMPL 395 (422)
T ss_dssp EEEEEEESSSCSSTTSSCEEEEEEC---CC----HHHHHHHHHHTTGGGCC-SEEEEEEEEE-TTSCEEEEEEECTTCCC
T ss_pred EEEEEEcCCCCceeccCceeeeeeC---CC----HHHHHHHHHHHHHhCCC-CEEEEEEEEc-CCCCEEEEEECCCCCCC
Confidence 6443321 0011111 11112222 33 46888999999999 56 8999999999 788899999999 665
Q ss_pred cccccccccccCcHHHHHHHHH
Q psy15251 302 VEHPVSEMITGVDLVQWQLMVA 323 (720)
Q Consensus 302 ~~~~~~e~~tGvdl~~~~l~~a 323 (720)
-+ -++..++.|+.+..++..
T Consensus 396 ~~--g~~~~~~~~IA~~ii~~i 415 (422)
T 1pk8_A 396 IG--DHQDEDKQLIVELVVNKM 415 (422)
T ss_dssp CT--TCHHHHHHHHHHHHHHHH
T ss_pred cc--chhhhHHHHHHHHHHHHH
Confidence 33 333456888888887755
No 67
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=1.3e-17 Score=148.06 Aligned_cols=104 Identities=43% Similarity=0.672 Sum_probs=91.2
Q ss_pred HHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHh
Q psy15251 117 RNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQS 196 (720)
Q Consensus 117 ~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~ 196 (720)
.+++||..++++|+++|||+|+++...+.+.+++.++++++|||+|+||..|+||+|++++++.+|+.++++.+...+..
T Consensus 4 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~~~~~~gv~~v~~~~el~~~~~~~~~~~~~ 83 (108)
T 2cqy_A 4 GSSGDKIESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAAS 83 (108)
T ss_dssp CCCCCCCCSTTCCCSSCCCCCSCCCSCBSSHHHHHHHHHHHCSSEEEEETTSCCTTTCEEESSHHHHHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHhcCCCEEEEECCCCCCccEEEeCCHHHHHHHHHHHHHHHHh
Confidence 45789999999999999999998711278999999999999999999999999999999999999999999988765555
Q ss_pred cCCCCcEEEeccccCCceEEEEEE
Q psy15251 197 AFNDSKVLLEKYIQSPRHIEVQII 220 (720)
Q Consensus 197 ~f~~~~~lvEeyI~g~~~~~v~v~ 220 (720)
.+++..++||+||+|.+|++++++
T Consensus 84 ~~~~~~~lvee~i~g~~E~~v~v~ 107 (108)
T 2cqy_A 84 SFGDDRLLIEKFIDNPRHISGPSS 107 (108)
T ss_dssp HTSSCCEEEEECCSSSSCCCSCCC
T ss_pred hcCCCcEEEeeccCCCcEEEEEec
Confidence 566689999999998779888764
No 68
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=99.66 E-value=2.5e-15 Score=161.20 Aligned_cols=230 Identities=14% Similarity=0.127 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCCCC-Ccc---
Q psy15251 18 EIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGYGF-LSE--- 93 (720)
Q Consensus 18 ~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~g~-lsE--- 93 (720)
.+..++++++++.|++++.++. +...... ...|+|++..+. ..|
T Consensus 33 ~~~~~l~~al~~~G~~~~~iD~--~~~~~~~------------------------------~~~Dvvi~~l~~~~~ea~~ 80 (346)
T 2q7d_A 33 LNFQAFAELCRKRGMEVVQLNL--SRPIEEQ------------------------------GPLDVIIHKLTDVILEADQ 80 (346)
T ss_dssp HTHHHHHHHHHTTTCEEEECCT--TSCSGGG------------------------------CCCSEEEECCHHHHHHHHT
T ss_pred hhHHHHHHHHHhCCcEEEEccc--ccchhhc------------------------------CCCCEEEeCCccccccccc
Confidence 3467899999999999887742 2111000 246666665431 111
Q ss_pred -----cHHHHHH--HH--HCCCeEeCCCHHHHHHhcCHHHHHHHHHHC-------CCCCCCcccCCCCC--HHHHHHHHH
Q psy15251 94 -----NAEFANA--VE--GNRLIFVGPSSEAIRNMGIKSTSKEIMIKA-------EVPVIPGYHGEDQN--EEILMEQAE 155 (720)
Q Consensus 94 -----~~~~a~~--~~--~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~-------Gvp~p~~~~~~~~s--~~e~~~~~~ 155 (720)
......+ ++ ..|++++ +++.++..+.||..|.+++.++ |||+|++.. +.+ .+++.+..+
T Consensus 81 ~d~~~~~~~~~l~~~~~~~~gv~vi-np~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t~~--~~~~~~~~~~~~~~ 157 (346)
T 2q7d_A 81 NDSQSLELVHRFQEYIDAHPETIVL-DPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPFME--LTSLCGDDTMRLLE 157 (346)
T ss_dssp TCHHHHHHHHHHHHHHHHCTTSEEE-SCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCEEE--ECSCCCTTHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHCCCeEEc-CCHHHHHHhhhHHHHHHHHHhhcccccCCCCCCCCEEE--EeCCCHHHHHHHHH
Confidence 1111111 11 2478766 8999999999999999999997 999999987 443 244544443
Q ss_pred --HhCCcEEEeecCCCC--CcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEecccc-CCceEEEEEEEcccccEEEE
Q psy15251 156 --RIGYPLMIKAVRGGG--GKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQ-SPRHIEVQIIGDRYGNYVYL 230 (720)
Q Consensus 156 --~ig~PvvvKp~~g~G--g~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~-g~~~~~v~v~~d~~G~~v~~ 230 (720)
.+|||+|+||..|.| +.||.++.+.++|... +.+++|||||+ +++++.|-++++ +++..
T Consensus 158 ~~~lg~P~VvKP~~g~Gs~s~~v~~v~~~~~l~~~-------------~~~~lvQefI~~~G~dirv~VvG~---~v~~~ 221 (346)
T 2q7d_A 158 KNGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNAI-------------QPPCVVQNFINHNAVLYKVFVVGE---SYTVV 221 (346)
T ss_dssp HTTCCSSEEEECSBCSSTTCCEEEEECSGGGTTC---------------CCEEEEECCCCTTEEEEEEEETT---EEEEE
T ss_pred hcCCCCCEEEEecCCCcceeeeeEEecCHHHHHhc-------------CCCEEEEEeeCCCCeEEEEEEECC---EEEEE
Confidence 578999999998643 6799999999987641 46899999997 467888888764 45544
Q ss_pred Eeeecc---cc------------ccc--eeEEEEcC------CCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCC
Q psy15251 231 YERDCS---VQ------------RRH--QKIIEEAP------APGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPS 287 (720)
Q Consensus 231 ~~r~~s---~~------------r~~--~k~~e~~P------a~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~ 287 (720)
..+-.. .. +.+ ...-..+| ...+++ .+++.+.|.++.++||+..+ .+|++++..
T Consensus 222 ~r~sl~~~~~~~~~~~~~~f~s~~~~~~g~~~~~~~~~~~~~~~~~~~--~~el~~lA~~a~~alGl~~~-gvDii~~~~ 298 (346)
T 2q7d_A 222 QRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFERPS--DEVIRELSRALRQALGVSLF-GIDIIINNQ 298 (346)
T ss_dssp EEECCCCCC----CCCCEEEEGGGTSSTTCCCGGGCCSCCCSCCCCCC--HHHHHHHHHHHHHHHCCCEE-EEEEEECTT
T ss_pred EEecCCCcCcCccccccccccceeeccCCccccccccccccccccCCC--hHHHHHHHHHHHHHhCCceE-eeEEEeecC
Confidence 322100 00 000 00000011 011222 57899999999999999866 599999832
Q ss_pred CCcEEEEEecCCCC
Q psy15251 288 SGEFYFMEMNTRLQ 301 (720)
Q Consensus 288 ~g~~~~iEiNpR~~ 301 (720)
+|++|+||+|+=++
T Consensus 299 ~g~~~VlEVN~~PG 312 (346)
T 2q7d_A 299 TGQHAVIDINAFPG 312 (346)
T ss_dssp TCCEEEEEEEESCC
T ss_pred CCCEEEEEEeCCcc
Confidence 57899999999665
No 69
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=99.62 E-value=5.9e-16 Score=131.02 Aligned_cols=71 Identities=21% Similarity=0.329 Sum_probs=67.9
Q ss_pred CCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 648 DPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 648 ~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
++..|.||++|+|++|+|++||.|++||+|++||+|||+++|+||++|+|.++. ++|+.|..|++|++|.+
T Consensus 4 ~~~~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~-~~G~~V~~G~~l~~i~~ 74 (84)
T 2kcc_A 4 DPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKYIK-RPGAVLEAGCVVARLEL 74 (84)
T ss_dssp CTTEECCSSSCCEEEESSCTTEEECTTCEEEEEECSSCEEEEECSSSEEEEECS-CTTCCCCTTCCCEEEEC
T ss_pred CCceEECCCCEEEEEEECCCCCEECCCCEEEEEEecceeEEEECCCCEEEEEEc-CCCCEECCCCEEEEEeC
Confidence 345799999999999999999999999999999999999999999999999999 99999999999999975
No 70
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=5.6e-15 Score=129.39 Aligned_cols=71 Identities=20% Similarity=0.330 Sum_probs=67.9
Q ss_pred CCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 648 DPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 648 ~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
....|.||++|+|++|+|++||.|++||+|++||+|||+++|+||++|+|. +.+++|+.|..|++|++|.+
T Consensus 16 ~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le~~k~~~~i~Ap~~G~V~-~~v~~G~~V~~G~~l~~i~~ 86 (100)
T 2dn8_A 16 DPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVK-YIKRPGAVLEAGCVVARLEL 86 (100)
T ss_dssp CTTEEECSSCEEEEEESSCTTEEECTTCEEEEEEETTEEEEEECSSSEEEE-ECSCTTCEECSSCEEEEECC
T ss_pred CCcEEeCCCCEEEEEEEcCCcCEECCCCEEEEEEecceEEEEEcCCCEEEE-EEeCCCCEECCCCEEEEEEc
Confidence 445899999999999999999999999999999999999999999999999 99999999999999999864
No 71
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.57 E-value=4e-15 Score=124.80 Aligned_cols=69 Identities=33% Similarity=0.519 Sum_probs=66.6
Q ss_pred CeeecCCcceeeEE-------ecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 650 SKVVSPMPGMVDKV-------LVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 650 ~~v~ap~~g~v~~~-------~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
..|+||++|+|.++ +|++||.|++||+|+.||+|||+++|+||++|+|.++++++|+.|.+|++|++|+
T Consensus 5 ~~v~a~~~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 5 HIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp EEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred eEEEcCCCeEEEEecccCcccccCCcCEECCCCEEEEEEeccEEEEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 46999999999997 9999999999999999999999999999999999999999999999999999884
No 72
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=99.57 E-value=6.7e-15 Score=120.77 Aligned_cols=68 Identities=28% Similarity=0.461 Sum_probs=66.4
Q ss_pred eecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 652 VVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 652 v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
|.||++|+|.+|+|++||.|++||+|+.||+|||+.+|+||++|+|.++.+++|+.|.+|++|++|.+
T Consensus 2 v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~v~~G~~V~~G~~l~~i~~ 69 (72)
T 1z6h_A 2 VSIQMAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEGDFVNEGDVLLELSN 69 (72)
T ss_dssp EECCSSEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEESSCTTCEECTTCEEEEEGG
T ss_pred EECcccEEEEEEEcCCcCEECCCCEEEEEECCccEEEEECCCCcEEEEEecCCCCEECCCCEEEEEeC
Confidence 78999999999999999999999999999999999999999999999999999999999999999875
No 73
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=99.56 E-value=6.5e-15 Score=125.56 Aligned_cols=66 Identities=18% Similarity=0.225 Sum_probs=63.4
Q ss_pred cCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCC-cccCCCeEEEEec
Q psy15251 654 SPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQ-SIQKNQNLVKIVP 719 (720)
Q Consensus 654 ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~-~v~~g~~l~~i~~ 719 (720)
++.+|+|++|+|++||.|++||+|++||+|||+++|+||++|+|.++++++|+ .|..|++|++|++
T Consensus 16 ~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~~ 82 (87)
T 3crk_C 16 TMTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVE 82 (87)
T ss_dssp TCCEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCCEETTCEEEEEES
T ss_pred CCCcEEEEEEEcCCCCEEcCCCEEEEEECCcccceeecCcCcEEEEEEECCCCeEECCCCEEEEEEc
Confidence 35899999999999999999999999999999999999999999999999999 8999999999975
No 74
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=99.55 E-value=7e-15 Score=122.99 Aligned_cols=66 Identities=27% Similarity=0.347 Sum_probs=64.0
Q ss_pred cCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 654 SPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 654 ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
++++|+|++|+|++||.|++||+|+++|+|||+++|+||++|+|.++++++|+.|..|++|++|.+
T Consensus 12 ~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 12 SIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp SCSCEEECCCSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred CCCCEEEEEEEcCCCCEECCCCEEEEEEccceeEEEEcCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 568999999999999999999999999999999999999999999999999999999999999875
No 75
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=99.53 E-value=1.1e-14 Score=125.51 Aligned_cols=65 Identities=25% Similarity=0.281 Sum_probs=63.0
Q ss_pred CCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 655 PMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 655 p~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
..+|+|++|+|++||.|++||+|++||+|||+++|+||++|+|.++++++|+.|..|++|++|++
T Consensus 16 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K~~~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~~ 80 (93)
T 1k8m_A 16 IREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIET 80 (93)
T ss_dssp SCCEEEEEECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSSCEECTTSEEEEEEC
T ss_pred CCCEEEEEEEcCCcCEECCCCEEEEEEcCCcEEEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEec
Confidence 47999999999999999999999999999999999999999999999999999999999999975
No 76
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=99.52 E-value=4.9e-14 Score=117.18 Aligned_cols=72 Identities=35% Similarity=0.600 Sum_probs=68.5
Q ss_pred CCCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 647 SDPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 647 ~~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
.....|.||++|+|.+|++++||.|++||+|+.||+|||+.+|+||++|+|.++.+++|+.|..|++|++|+
T Consensus 6 ~~~~~v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~~~~~~~~i~Ap~~G~v~~~~~~~G~~v~~G~~l~~i~ 77 (77)
T 1dcz_A 6 AGEGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG 77 (77)
T ss_dssp CCSSEEEBSSSCEEEEECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTTCBCCBTSEEEEEC
T ss_pred CCCeEEECCCCEEEEEEEcCCcCEEcCCCEEEEEEccceeEEEECCCCEEEEEEecCCcCEECCCCEEEEEC
Confidence 345679999999999999999999999999999999999999999999999999999999999999999885
No 77
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.8e-14 Score=125.39 Aligned_cols=65 Identities=25% Similarity=0.290 Sum_probs=62.7
Q ss_pred CCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcc-cCCCeEEEEec
Q psy15251 655 PMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSI-QKNQNLVKIVP 719 (720)
Q Consensus 655 p~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v-~~g~~l~~i~~ 719 (720)
.++|+|++|+|++||.|++||+|++||+|||+++|+||++|+|.++++++|+.| ..|++|++|..
T Consensus 19 ~~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K~~~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i~~ 84 (98)
T 2dnc_A 19 MEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVE 84 (98)
T ss_dssp CSEECEEEESSCTTCEECTTSEEEEEECSSCEEEEECSSCEEEEECSSCTTCCCEESSCEEEEEEC
T ss_pred CccEEEEEEEcCCCCEeCCCCEEEEEEcccceeEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEEec
Confidence 379999999999999999999999999999999999999999999999999999 99999999874
No 78
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=99.51 E-value=5.3e-14 Score=115.93 Aligned_cols=70 Identities=36% Similarity=0.617 Sum_probs=67.3
Q ss_pred CCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 649 PSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 649 ~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
...|.||++|+|.+|++++||.|++||+|+.+|+|||+.+|+||.+|+|.++.+++|+.|..|++|++|+
T Consensus 5 ~~~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 74 (74)
T 2d5d_A 5 ENVVSAPMPGKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEGEAVDTGQPLIELG 74 (74)
T ss_dssp CCEEECSSCEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred CeEEecCCCEEEEEEEcCCCCEeCCCCEEEEEecccceEEEeCCCCEEEEEEEcCCcCEECCCCEEEEEC
Confidence 3579999999999999999999999999999999999999999999999999999999999999999874
No 79
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=99.51 E-value=1.6e-14 Score=120.19 Aligned_cols=67 Identities=22% Similarity=0.324 Sum_probs=64.2
Q ss_pred ecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 653 VSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 653 ~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
.+|++|+|++|+|++||.|++||+|+.+|+|||+.+|+||++|+|.++++++|+.|.+|++|++|+.
T Consensus 11 ~~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (77)
T 2l5t_A 11 EGVTEGEIVRWDVKEGDMVEKDQDLVEVMTDKVTVKIPSPVRGKIVKILYREGQVVPVGSTLLQIDT 77 (77)
T ss_dssp SSCCCEEEEECSCCTTCEECSCCCCCEEESSSCEEECCCCCCEEEEEECCCTTCEECSCSEEEEEEC
T ss_pred CCCccEEEEEEEeCCCCEECCCCEEEEEEccceEEEEECCCCEEEEEEEeCCcCEECCCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999999999999999999999863
No 80
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=99.50 E-value=2.2e-14 Score=126.93 Aligned_cols=65 Identities=17% Similarity=0.176 Sum_probs=62.6
Q ss_pred CCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCC-cccCCCeEEEEec
Q psy15251 655 PMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQ-SIQKNQNLVKIVP 719 (720)
Q Consensus 655 p~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~-~v~~g~~l~~i~~ 719 (720)
..+|+|++|+|++||.|++||+|++||+|||+++|+||++|+|.++++++|+ .|..|++|++|+.
T Consensus 19 ~~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K~~~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~i~~ 84 (108)
T 2dne_A 19 MQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICITVG 84 (108)
T ss_dssp CCEEEEEECSSCTTCEECTTSEEEEEECSSCEEEEECSSSEEEEECSSCTTCCSEETTCEEEEEES
T ss_pred cccEEEEEEEcCCCCEecCCCEEEEEEcCcceeEEeCCCCEEEEEEEeCCCCeeecCCCEEEEEec
Confidence 4789999999999999999999999999999999999999999999999999 9999999999974
No 81
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=99.48 E-value=5.5e-14 Score=127.54 Aligned_cols=64 Identities=20% Similarity=0.257 Sum_probs=61.9
Q ss_pred CcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCC-cccCCCeEEEEec
Q psy15251 656 MPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQ-SIQKNQNLVKIVP 719 (720)
Q Consensus 656 ~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~-~v~~g~~l~~i~~ 719 (720)
.+|+|++|+|++||.|++||+|++||+|||+++|+||++|+|.++++++|+ .|..|++|++|+.
T Consensus 40 ~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~~~~I~Ap~~G~V~~i~v~~Gd~~V~~G~~L~~i~~ 104 (128)
T 1y8o_B 40 TMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVE 104 (128)
T ss_dssp SEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCSEETTCEEEEEES
T ss_pred ccEEEEEEecCCCCEecCCCEEEEEEcCcceeEEeCCCCeEEEEEEeCCCCeeecCCCEEEEEec
Confidence 579999999999999999999999999999999999999999999999998 8999999999975
No 82
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=99.48 E-value=9.6e-15 Score=126.28 Aligned_cols=71 Identities=39% Similarity=0.635 Sum_probs=32.9
Q ss_pred CCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 648 DPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 648 ~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
....|.||++|+|.+|+|++||.|++||+|++||+|||+.+|+||++|+|.++.+++|+.|.+|++|++|+
T Consensus 24 ~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~ie 94 (94)
T 2jku_A 24 TSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVGEGDLLVELE 94 (94)
T ss_dssp CCCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC------------------------------------
T ss_pred CceEEECCCCEEEEEEECCCCCEEcCCCEEEEEecccccEEEECCCCEEEEEEcCCCcCEECCCCEEEEEC
Confidence 34579999999999999999999999999999999999999999999999999999999999999999874
No 83
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=99.48 E-value=4.5e-14 Score=153.43 Aligned_cols=169 Identities=18% Similarity=0.217 Sum_probs=123.2
Q ss_pred CHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCC-cEEEeec--CCCCCcc---------eEEeCCHHHHHHHHH
Q psy15251 121 IKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGY-PLMIKAV--RGGGGKG---------MRIVRDSANFLAQLR 188 (720)
Q Consensus 121 DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~-PvvvKp~--~g~Gg~G---------v~~v~~~~el~~~~~ 188 (720)
+++.+|++|+++|||+|++.. +.+.+++.++++++|| |+|+||. .|+.|+| |+++++.+|+.++++
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~~--~~s~~ea~~~a~~lg~~PvVvK~~i~~GGrGKg~~ks~~~GGV~l~~s~~e~~~a~~ 81 (395)
T 2fp4_B 4 QEYQSKKLMSDNGVKVQRFFV--ADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAK 81 (395)
T ss_dssp CHHHHHHHHHHTTCCCCCEEE--ESSHHHHHHHHHHHTCSSEEEEECCSSSCGGGCEETTSCBCSEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcCCCCeEE--ECCHHHHHHHHHHcCCCcEEEEEeeccCCCccCccccCCcCCEEEECCHHHHHHHHH
Confidence 678999999999999999987 8999999999999999 8999995 5555555 999999999999988
Q ss_pred HHHHHHH--hcC---C--CCcEEEeccccCCceEEEEEEEccc-c-cEEEEE-eeecccccc----ceeEEEEc--CCCC
Q psy15251 189 SAQRESQ--SAF---N--DSKVLLEKYIQSPRHIEVQIIGDRY-G-NYVYLY-ERDCSVQRR----HQKIIEEA--PAPG 252 (720)
Q Consensus 189 ~~~~~~~--~~f---~--~~~~lvEeyI~g~~~~~v~v~~d~~-G-~~v~~~-~r~~s~~r~----~~k~~e~~--Pa~~ 252 (720)
++..... ..+ + .+.++||+|++.++|+.+.++.|.. | .++.+. ...+.++.- ..++.... |...
T Consensus 82 ~~l~~~~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~i~~D~~~~~pvi~~s~~GG~~iE~va~~~~d~i~~~~idp~~~ 161 (395)
T 2fp4_B 82 QMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEG 161 (395)
T ss_dssp TTTTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEETTTTEEEEEEESSCSSCHHHHHHHCGGGCEEEECCTTTC
T ss_pred HHhhcchhhhccCCCCCccceEEEEEccCCceeEEEEEEEccccCceEEEEECCCCccceeccccCCceEEEEecCCCCC
Confidence 7754320 011 1 2479999999988999999999975 2 445554 333444421 34444443 5445
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCcceeEEE----------EEEeCCCCcEEEEEecCCCC
Q psy15251 253 ISSEFRSRLGSTGVQVARAVRYHNAGTVE----------FIMDPSSGEFYFMEMNTRLQ 301 (720)
Q Consensus 253 l~~~~~~~l~~~a~~i~~alg~~G~~~vE----------f~~~~~~g~~~~iEiNpR~~ 301 (720)
+++ ..++++++.+|+.+...-+ ++.+ . +++++||||++-
T Consensus 162 l~~-------~~a~~l~~~lg~~~~~~~~~~~~l~~l~~l~~~--~-d~~~lEINPl~~ 210 (395)
T 2fp4_B 162 IKD-------SQAQRMAENLGFLGPLQNQAADQIKKLYNLFLK--I-DATQVEVNPFGE 210 (395)
T ss_dssp CCH-------HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH--T-TEEEEEEEEEEE
T ss_pred CCH-------HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhhh--C-CeEEEEeeeEEE
Confidence 665 4567777788886542221 2234 3 599999999984
No 84
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=99.44 E-value=2.3e-14 Score=120.47 Aligned_cols=68 Identities=15% Similarity=0.226 Sum_probs=64.9
Q ss_pred eecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 652 VVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 652 v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
+.++++|+|++|+|++||.|++||+|++||+|||+++|+||++|+|.++++++|+.|..|++|++|.+
T Consensus 10 ~g~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (81)
T 1gjx_A 10 IGGHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEA 77 (81)
T ss_dssp CSSCSSEEEEEECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSSCEECSSSCCCEECC
T ss_pred CCCCCcEEEEEEEcCCCCEECCCCEEEEEEeCCcEEEEECCCCEEEEEEecCCCCEeCCCCEEEEEEe
Confidence 33689999999999999999999999999999999999999999999999999999999999999875
No 85
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=99.44 E-value=1.3e-13 Score=120.37 Aligned_cols=72 Identities=38% Similarity=0.682 Sum_probs=68.6
Q ss_pred CCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 648 DPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 648 ~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
....|.||++|+|++|+|++||.|++||+|+.||+|||+.+|+||++|+|.++.+++|+.|..|++|++|.+
T Consensus 13 ~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~i~~ 84 (99)
T 2ejm_A 13 TQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFEE 84 (99)
T ss_dssp CCSSCBCSSSEEEEEECCCTTEEECSSCEEEEEESSSSEEEEECSSCEEEEEESCCTTEEECTTCBCEEECC
T ss_pred CceEEecCCCEEEEEEECCCCCEECCCCEEEEEEccceeEEEECCCCeEEEEEEcCCCCEECCCCEEEEEEC
Confidence 345799999999999999999999999999999999999999999999999999999999999999999864
No 86
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=99.44 E-value=9.9e-14 Score=150.64 Aligned_cols=169 Identities=15% Similarity=0.211 Sum_probs=120.6
Q ss_pred CHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCc-EEEeecCCCCCc----ceEEeCCHHHHHHHHHHHHHHHH
Q psy15251 121 IKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYP-LMIKAVRGGGGK----GMRIVRDSANFLAQLRSAQRESQ 195 (720)
Q Consensus 121 DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~P-vvvKp~~g~Gg~----Gv~~v~~~~el~~~~~~~~~~~~ 195 (720)
+|+.+|++|+++|||+|++.. +.+.+++.++++++||| +|+||..+.||+ ||+++++.+|+.++++++.....
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~~--~~s~eea~~aa~~lG~P~vVvK~~~~~ggrg~~gGV~l~~s~eel~~a~~~~~~~~~ 81 (388)
T 2nu8_B 4 HEYQAKQLFARYGLPAPVGYA--CTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRL 81 (388)
T ss_dssp CHHHHHHHHHHTTCCCCCEEE--ESSHHHHHHHHHHHCSSCEEEEECCSSSCTTTTTCEEEECSHHHHHHHHHHHTTSEE
T ss_pred CHHHHHHHHHHCCcCCCCeeE--ECCHHHHHHHHHHhCCCeEEEEEecCCCCCCccCCEEEECCHHHHHHHHHHHhhhhh
Confidence 789999999999999999987 89999999999999999 999999876555 99999999999999988764211
Q ss_pred -------hcCCCCcEEEeccccCCceEEEEEEEccc-c-cEEEEE-ee--eccc-cccc-eeEEE--EcCCCCCCHHHHH
Q psy15251 196 -------SAFNDSKVLLEKYIQSPRHIEVQIIGDRY-G-NYVYLY-ER--DCSV-QRRH-QKIIE--EAPAPGISSEFRS 259 (720)
Q Consensus 196 -------~~f~~~~~lvEeyI~g~~~~~v~v~~d~~-G-~~v~~~-~r--~~s~-~r~~-~k~~e--~~Pa~~l~~~~~~ 259 (720)
.......++||+|++.++|+.+.++.|.. | .++.+. .. ++.. ...+ .++.. ..|+..+++..
T Consensus 82 ~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~v~~D~~~g~pvi~~~~~GGv~iE~v~~~~pd~i~~~~i~P~~gl~~~~-- 159 (388)
T 2nu8_B 82 VTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQ-- 159 (388)
T ss_dssp CCTTSCTTCEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEESCTTSCHHHHHHHCGGGEEEEECBTTTBCCHHH--
T ss_pred hccccCCCCcccceEEEEEccccCCcEEEEEEEecccCCcEEEEeCCCCcchhhccccCCceEEEEecCCCCCCCHHH--
Confidence 00113579999999988999999999986 3 344443 11 2221 2211 34444 56766677654
Q ss_pred HHHHHHHHHHHHcCCcceeE---------E-EEEEeCCCCcEEEEEecCCCC
Q psy15251 260 RLGSTGVQVARAVRYHNAGT---------V-EFIMDPSSGEFYFMEMNTRLQ 301 (720)
Q Consensus 260 ~l~~~a~~i~~alg~~G~~~---------v-Ef~~~~~~g~~~~iEiNpR~~ 301 (720)
+.++++.+|+.+... + +++.+ . +++++||||++-
T Consensus 160 -----a~~~~~~lG~~~~~~~~~~~~l~~l~~~~~~--~-d~~~lEINPl~~ 203 (388)
T 2nu8_B 160 -----GRELAFKLGLEGKLVQQFTKIFMGLATIFLE--R-DLALIEINPLVI 203 (388)
T ss_dssp -----HHHHHHHTTCCTHHHHHHHHHHHHHHHHHHH--T-TEEEEEEEEEEE
T ss_pred -----HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHh--C-CEEEEEecceEE
Confidence 344444566654210 0 22334 3 599999999885
No 87
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=99.43 E-value=2.3e-14 Score=121.64 Aligned_cols=69 Identities=16% Similarity=0.262 Sum_probs=66.0
Q ss_pred eeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 651 KVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 651 ~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
.+++|..|+|++|+|++||.|++||+|++||+|||+++|+||++|+|.++++++|+.|..|++|++|.+
T Consensus 4 ~i~~p~~G~v~~~~v~~Gd~V~~G~~L~~ie~~k~~~~i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~~ 72 (85)
T 2k7v_A 4 EVNVPDIVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEV 72 (85)
T ss_dssp CCCCCSCCCCCSCCCSSSCCCCCSSSCCCCSCCCSEEEEECSSCBCCCEECSCTTCCBCTTSEEEEEEC
T ss_pred EEECCCeEEEEEEEcCCCCEEcCCCEEEEEEccccEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEEc
Confidence 367888899999999999999999999999999999999999999999999999999999999999974
No 88
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.43 E-value=1.5e-13 Score=115.18 Aligned_cols=63 Identities=14% Similarity=0.266 Sum_probs=61.8
Q ss_pred cceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 657 PGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 657 ~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
+|+|.+|+|++||.|++||+|++||+|||+.+|+||++|+|.++++++|+.|.+|++|++|.+
T Consensus 14 ~G~v~~~~v~~G~~V~~G~~l~~ie~~~~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~ 76 (80)
T 1qjo_A 14 EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEV 76 (80)
T ss_dssp CEEEEECCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTTCEECTTCCCEEEES
T ss_pred CEEEEEEEcCCCCEECCCCEEEEEEcCCceEEEeCCCCEEEEEEecCCCCEECCCCEEEEEEc
Confidence 999999999999999999999999999999999999999999999999999999999999975
No 89
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=99.42 E-value=1.9e-13 Score=167.18 Aligned_cols=70 Identities=27% Similarity=0.386 Sum_probs=67.5
Q ss_pred CCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEE
Q psy15251 648 DPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKI 717 (720)
Q Consensus 648 ~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i 717 (720)
+...|.|||+|+|++|+|++||+|++||+|++||+|||+++|+||.+|+|+++.+++||.|..|++|++|
T Consensus 1166 ~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~v~ap~~G~v~~i~v~~G~~V~~G~~l~~i 1235 (1236)
T 3va7_A 1166 DAELLYSEYTGRFWKPVAAVGDHVEAGDGVIIIEAMKTEMVVGATKSGKVYKILHKNGDMVEAGDLVAVI 1235 (1236)
T ss_dssp TCEEEECSSCEEEEEESSCTTCEECSSCEEEEEEETTEEEEEECSSCEEEEEECCCTTCEECTTCEEEEE
T ss_pred CCcEEeCCCcEEEEEEEcCCCCEECCCCEEEEEEecCcceeEecCCCeEEEEEEeCCcCEeCCCCEEEEe
Confidence 3457999999999999999999999999999999999999999999999999999999999999999987
No 90
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.41 E-value=8.9e-15 Score=122.65 Aligned_cols=65 Identities=18% Similarity=0.293 Sum_probs=62.9
Q ss_pred CCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 655 PMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 655 p~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
..+|+|++|+|++||.|++||+|++||+|||+++|+||++|+|.++++++|+.|..|++|++|++
T Consensus 14 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 14 VADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CSCEECCBCCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred CccEEEEEEECCCcCEECCCCEEEEEEccceEEEEECCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 57999999999999999999999999999999999999999999999999999999999999875
No 91
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=99.41 E-value=4.8e-13 Score=111.76 Aligned_cols=62 Identities=16% Similarity=0.391 Sum_probs=60.4
Q ss_pred cceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 657 PGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 657 ~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
+ +|.+|+|++||.|++||+|++||+|||+++|+||++|+|.++++++|+.|..|++|++|.+
T Consensus 13 ~-~i~~~~v~~Gd~V~~G~~l~~le~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~~ 74 (79)
T 1iyu_A 13 G-EVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEP 74 (79)
T ss_dssp E-EEEEECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTTCEEETTSEEEEEEC
T ss_pred C-EEEEEecCCCCEEcCCCEEEEEEccceEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEec
Confidence 6 9999999999999999999999999999999999999999999999999999999999875
No 92
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=99.36 E-value=3.3e-13 Score=137.80 Aligned_cols=200 Identities=15% Similarity=0.159 Sum_probs=133.7
Q ss_pred CCEEEeCC--CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCH-----------
Q psy15251 81 CQAIHPGY--GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNE----------- 147 (720)
Q Consensus 81 ~daI~pg~--g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~----------- 147 (720)
+|.+++-| ||-. ....+.++..+. |.-++..++..++||..+.++|+++|||+|++.. +...
T Consensus 58 ~d~lisf~s~gfpl--~kai~y~~lr~p-~~INd~~~q~~~~DK~~~~~iL~~~gIPtP~t~~--~~rd~~~~~~~~~~e 132 (330)
T 3t7a_A 58 CDCLISFHSKGFPL--DKAVAYAKLRNP-FVINDLNMQYLIQDRREVYSILQAEGILLPRYAI--LNRDPNNPKECNLIE 132 (330)
T ss_dssp CSEEEECCCTTCCH--HHHHHHHHHHCC-EESBCSTHHHHHTBHHHHHHHHHHTTCCCCCEEE--ECCBTTBGGGSSEEE
T ss_pred CCEEEEeccCCCcH--HHHHHHHHHhCC-ceeCCHHHHHHHHHHHHHHHHHHHcCCCCCCEEE--EeCCCCCccccceec
Confidence 67777765 4432 233444555554 4558999999999999999999999999999876 3321
Q ss_pred -HHHHH-HHHHhCCcEEEeecCCC---------------CCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEecccc
Q psy15251 148 -EILME-QAERIGYPLMIKAVRGG---------------GGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQ 210 (720)
Q Consensus 148 -~e~~~-~~~~ig~PvvvKp~~g~---------------Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~ 210 (720)
++..+ ....+++|+|+||..|. +++-++++.|.+.....-... + .+..+|+||||+
T Consensus 133 ~~d~i~~~g~~l~kPfVeKPv~Gsdhni~iyyp~s~GgG~~RLfrki~n~sS~~~~~~~v-r------~~~~~i~QEFI~ 205 (330)
T 3t7a_A 133 GEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNV-R------KTGSYIYEEFMP 205 (330)
T ss_dssp CSSEEEETTEEEESSEEEEESBTTCCCCEEECCGGGTCCEEEEEEEETTEEEEEESCCSC-C------SSSCEEEEECCC
T ss_pred cchhhhhccccccCCeeEcccccccCcceeecccccCCchhhhhhhhCCcccccChhhhh-c------cCCcEEEEeccC
Confidence 11111 23456899999999995 224455666554321000001 1 157899999997
Q ss_pred -CCceEEEEEEEcccccEEEEEeeeccc----cccceeEEE-EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEE
Q psy15251 211 -SPRHIEVQIIGDRYGNYVYLYERDCSV----QRRHQKIIE-EAPAPGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIM 284 (720)
Q Consensus 211 -g~~~~~v~v~~d~~G~~v~~~~r~~s~----~r~~~k~~e-~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~ 284 (720)
.++.+.+-++++ ++++...|..+. .|++..-.+ ..|. .++ ++..+.|.++++++|. +.+.||++.
T Consensus 206 ~~G~DIRv~vVG~---~vv~Am~R~sp~~~G~~r~N~~gG~~~~~v-~Lt----~eek~iA~kaa~a~G~-~v~GVDlLr 276 (330)
T 3t7a_A 206 TDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEVRYPV-ILN----AREKLIAWKVCLAFKQ-TVCGFDLLR 276 (330)
T ss_dssp CSSEEEEEEEEST---TCEEEEEEECTTSSCBCCBCTTSCBCCEEC-CCC----HHHHHHHHHHHHHTTB-SEEEEEEEE
T ss_pred CCCceEEEEEECC---EEEEEEEEeCCCCCCcEEEcCCCCceeeee-cCC----HHHHHHHHHHHHHhCC-ceEEEEEEE
Confidence 467888877774 788888775431 122211111 1233 355 4668899999999999 889999999
Q ss_pred eCCCCcEEEEEecCCCCcc
Q psy15251 285 DPSSGEFYFMEMNTRLQVE 303 (720)
Q Consensus 285 ~~~~g~~~~iEiNpR~~~~ 303 (720)
+ + +.+|++|+|.+..+.
T Consensus 277 s-~-~~~~V~EVNg~~fvk 293 (330)
T 3t7a_A 277 A-N-GQSYVCDVNGFSFVK 293 (330)
T ss_dssp E-T-TEEEEEEEEESCCCS
T ss_pred E-C-CccEEEEeCCCcccc
Confidence 9 4 569999999999755
No 93
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=99.32 E-value=4.5e-13 Score=154.76 Aligned_cols=71 Identities=30% Similarity=0.506 Sum_probs=68.0
Q ss_pred CCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 648 DPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 648 ~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
+...|.|||+|+|++|+|++||.|++||+|++||+||||++|+||.+|+|.++.+++|+.|..|++|++|+
T Consensus 648 ~~~~v~ap~~G~V~~v~V~~Gd~V~~Gq~L~~iEamKme~~I~Ap~~G~V~~i~v~~G~~V~~G~~L~~i~ 718 (718)
T 3bg3_A 648 VKGQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDMTLEGDDLILEIE 718 (718)
T ss_dssp SSSCEECSSCEEEEEECSCTTCCBCTTCCCEEEESSSCEEEECCCCCBCBCCCCCCSEEEECSSCEEECBC
T ss_pred CCceEeCCCCeEEEEEEeCCCCeeCCCCEEEEEecccceeEEecCCCeEEEEEecCCCCEeCCCCEEEEeC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999874
No 94
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=99.30 E-value=3.7e-12 Score=155.87 Aligned_cols=72 Identities=38% Similarity=0.600 Sum_probs=62.6
Q ss_pred CCCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 647 SDPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 647 ~~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
.+...|.|||+|+|++|+|++||.|++||+|++||+||||++|+||.+|+|+++.+++|+.|..|++|++|+
T Consensus 1093 ~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~iEamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~l~~i~ 1164 (1165)
T 2qf7_A 1093 GNAAHVGAPMPGVISRVFVSSGQAVNAGDVLVSIEAMKMETAIHAEKDGTIAEVLVKAGDQIDAKDLLAVYG 1164 (1165)
T ss_dssp TCTTEEECSSCEEEEEECCSSCCCC---CEEEEEEC---CEEEECCSSCCCCEECCCSSCEECTTBEEEEC-
T ss_pred CCCceeeCCCCeEEEEEEcCCcCEeCCCCEEEEEEcccceEEEEcCCCEEEEEEEeCCCCEECCCCEEEEec
Confidence 355789999999999999999999999999999999999999999999999999999999999999999986
No 95
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=99.20 E-value=1.1e-11 Score=113.18 Aligned_cols=69 Identities=23% Similarity=0.224 Sum_probs=64.0
Q ss_pred eeecCCcceeeEEec-CCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEE---EcCCCCccc---CCC-eEEEEec
Q psy15251 651 KVVSPMPGMVDKVLV-QPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEI---FYAAGQSIQ---KNQ-NLVKIVP 719 (720)
Q Consensus 651 ~v~ap~~g~v~~~~v-~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~---~~~~g~~v~---~g~-~l~~i~~ 719 (720)
...+|++|.|+.+.+ ++||+|++||+|++||||||+++|.||.+|+|+++ +++.|+.|+ .|+ .|++|++
T Consensus 38 ~~a~~~lG~i~~V~lp~vGd~V~~Gd~l~~VEs~K~~~eI~aPvsG~V~eiN~~l~~~p~~Vn~dp~g~GwL~~i~~ 114 (136)
T 1zko_A 38 NHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEI 114 (136)
T ss_dssp HHHHHHHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCEEEEE
T ss_pred hhhcccCCCcEEEEecCCCCEEeCCCEEEEEEEccEeEEEecCCCeEEEEEehhhccCccCcccCCCCCeEEEEEEE
Confidence 367899999999888 99999999999999999999999999999999999 778999999 888 8998874
No 96
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=99.14 E-value=2.9e-10 Score=123.68 Aligned_cols=109 Identities=23% Similarity=0.293 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecCCCCCc----ceEEeCCHHHHHHHHHHHHHHHHh
Q psy15251 121 IKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVRGGGGK----GMRIVRDSANFLAQLRSAQRESQS 196 (720)
Q Consensus 121 DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~g~Gg~----Gv~~v~~~~el~~~~~~~~~~~~~ 196 (720)
+-+.+|++|+++|||+|++.. +.+.+++.++++++|||+|+||....||+ ||+++.+.+|+.++++++......
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~~--~~s~eea~~aa~~lG~PvVvKa~~~~ggkg~~GGV~l~~s~ee~~~a~~~~~~~~~~ 81 (397)
T 3ufx_B 4 HEYQAKEILARYGVPVPPGKV--AYTPEEAKRIAEEFGKRVVIKAQVHVGGRGKAGGVKLADTPQEAYEKAQAILGMNIK 81 (397)
T ss_dssp CHHHHHHHHHHTTCCCCCEEE--ESSHHHHHHHHHHHTSCEEEEECCSSSCTTTTTCEEEESSHHHHHHHHHHHTTCEET
T ss_pred CHHHHHHHHHHCCCCCCCeEE--ECCHHHHHHHHHHcCCCEEEEEccccCCCCccceEEEeCCHHHHHHHHHHhhhhhcc
Confidence 457899999999999999988 89999999999999999999999865555 999999999999999887643221
Q ss_pred cCCCCcEEEeccccCCceEEEEEEEccccc-EEEEE
Q psy15251 197 AFNDSKVLLEKYIQSPRHIEVQIIGDRYGN-YVYLY 231 (720)
Q Consensus 197 ~f~~~~~lvEeyI~g~~~~~v~v~~d~~G~-~v~~~ 231 (720)
.+....+++|+|++.++|+.+.++.|..-. .+.++
T Consensus 82 g~~~~~vlVEe~v~~g~El~vgv~~D~~~g~pvi~~ 117 (397)
T 3ufx_B 82 GLTVKKVLVAEAVDIAKEYYAGLILDRAKKRVVLML 117 (397)
T ss_dssp TEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEE
T ss_pred CCccceEEEEEeecCCeeEEEEEEecCCCCCcEEEE
Confidence 222468999999998899999999997533 44443
No 97
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=99.08 E-value=1.1e-11 Score=135.92 Aligned_cols=63 Identities=25% Similarity=0.329 Sum_probs=0.0
Q ss_pred cceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 657 PGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 657 ~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
.|+|++|+|++||.|++||+|++||+|||+++|.||.+|+|.++++++|+.|..|++|+.|+.
T Consensus 16 eg~i~~w~v~~Gd~V~~gd~l~~vEt~K~~~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~ 78 (428)
T 3dva_I 16 EGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTVATVGQTLITLDA 78 (428)
T ss_dssp ---------------------------------------------------------------
T ss_pred cEEEEEEEcCCCCEECCCCEEEEEEeCCeeEEEecCCCeEEEEEEeCCCCEeCCCCEEEEEec
Confidence 699999999999999999999999999999999999999999999999999999999999864
No 98
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=99.06 E-value=1.5e-11 Score=123.03 Aligned_cols=63 Identities=27% Similarity=0.350 Sum_probs=0.0
Q ss_pred CcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCc-ccCCCeEEEEe
Q psy15251 656 MPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQS-IQKNQNLVKIV 718 (720)
Q Consensus 656 ~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~-v~~g~~l~~i~ 718 (720)
..|+|++|+|++||.|++||+|++||+|||+++|.||++|+|.++++++|+. |..|++|++|+
T Consensus 16 ~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~~~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~ 79 (229)
T 1zy8_K 16 EEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIV 79 (229)
T ss_dssp ----------------------------------------------------------------
T ss_pred CcEEEEEEecCCCCEeCCCCEEEEEecCCceeEEecCCCeEEEEEEecCCCeeecCCCEEEEEe
Confidence 5899999999999999999999999999999999999999999999999997 99999999985
No 99
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=99.05 E-value=1e-10 Score=105.10 Aligned_cols=69 Identities=19% Similarity=0.361 Sum_probs=64.3
Q ss_pred eeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeE-----------------------------EEEEcCCCeEEEEEE
Q psy15251 651 KVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKME-----------------------------YVITSGTSGIIEEIF 701 (720)
Q Consensus 651 ~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~-----------------------------~~i~a~~~G~v~~~~ 701 (720)
.|.||++|+|.+++|++||.|++||+|+.|++.+.+ ..|+||++|+|.++.
T Consensus 3 ~v~a~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~a~~~~~r~~~L~~~~~~s~~~~~~~~~~~~~~~i~AP~~G~V~~~~ 82 (116)
T 2k32_A 3 IIKPQVSGVIVNKLFKAGDKVKKGQTLFIIEQDQASKDFNRSKALFSQSAISQKEYDSSLATLDHTEIKAPFDGTIGDAL 82 (116)
T ss_dssp EECCSSCEEEEEECSCTTSEECTTCEEEEEECTTTSHHHHHHHHHTGGGCCSTTTTTHHHHTTTEEEEECSSSEEECCCS
T ss_pred EEeCcCCEEEEEEECCCcCEECCCCEEEEECHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHhhcCCEEEcCCCEEEEEEE
Confidence 588999999999999999999999999999988655 499999999999999
Q ss_pred cCCCCcccCC-CeEEEEec
Q psy15251 702 YAAGQSIQKN-QNLVKIVP 719 (720)
Q Consensus 702 ~~~g~~v~~g-~~l~~i~~ 719 (720)
+++|+.|.+| ++|+.|.+
T Consensus 83 ~~~G~~v~~g~~~l~~i~~ 101 (116)
T 2k32_A 83 VNIGDYVSASTTELVRVTN 101 (116)
T ss_dssp CCTTCEECTTTSCCEEEEC
T ss_pred CCCCCEEcCCCcEEEEEEC
Confidence 9999999999 99999864
No 100
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=98.82 E-value=1.4e-09 Score=98.87 Aligned_cols=68 Identities=24% Similarity=0.234 Sum_probs=58.4
Q ss_pred eecCCcceeeEEec-CCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCC---CCccc---CCC-eEEEEec
Q psy15251 652 VVSPMPGMVDKVLV-QPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAA---GQSIQ---KNQ-NLVKIVP 719 (720)
Q Consensus 652 v~ap~~g~v~~~~v-~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~---g~~v~---~g~-~l~~i~~ 719 (720)
...|+.|.|+.+.+ ++||+|++||+|++||||||..+|.||.+|+|++++.+. .+.|+ .|+ -|++|++
T Consensus 30 ~a~~~lG~i~~v~lp~~G~~V~~g~~l~~vEs~K~~~~I~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i~~ 105 (131)
T 1hpc_A 30 HAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKP 105 (131)
T ss_dssp HHHHHHCSEEEEECCCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHHHHCTTHHHHCTTTTTCCEEEEE
T ss_pred hhcccCCCceEEEecCCCCEEeCCCEEEEEEecceeEEEecCCCeEEEEEhhhhhcChhhhccCCCCCceEEEEEE
Confidence 55789999999988 999999999999999999999999999999999998654 44664 455 6777763
No 101
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=98.71 E-value=1.2e-08 Score=92.38 Aligned_cols=68 Identities=22% Similarity=0.162 Sum_probs=58.5
Q ss_pred eecCCcceeeEEec-CCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcC---CCCccc---CCC-eEEEEec
Q psy15251 652 VVSPMPGMVDKVLV-QPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYA---AGQSIQ---KNQ-NLVKIVP 719 (720)
Q Consensus 652 v~ap~~g~v~~~~v-~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~---~g~~v~---~g~-~l~~i~~ 719 (720)
...|+.|.|+.+.+ ++|++|++||++++||||||..+|.||.+|+|++++.+ ..+.|+ .|+ -|++|++
T Consensus 31 ~a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evN~~l~~~P~lvn~dpy~~gWl~~i~~ 106 (128)
T 3a7l_A 31 HAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKA 106 (128)
T ss_dssp HHHHHHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGTCTTHHHHCTTTTTCCEEEEE
T ss_pred HHhccCCceEEEEecCCCCEEeCCCEEEEEEecceeeEEecCCCeEEEEEhhhhccChHHhccCCCCCccEEEEEE
Confidence 45689999999987 99999999999999999999999999999999999864 456676 565 6777753
No 102
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=98.71 E-value=1.2e-08 Score=92.31 Aligned_cols=68 Identities=21% Similarity=0.276 Sum_probs=58.3
Q ss_pred eecCCcceeeEEec-CCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcC---CCCcc---cCCC-eEEEEec
Q psy15251 652 VVSPMPGMVDKVLV-QPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYA---AGQSI---QKNQ-NLVKIVP 719 (720)
Q Consensus 652 v~ap~~g~v~~~~v-~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~---~g~~v---~~g~-~l~~i~~ 719 (720)
...|+.|.|+.+.+ ++|++|++||++++||||||..+|.||.+|+|++++.+ ..+.| ..|+ -|++|++
T Consensus 30 ~a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i~~ 105 (128)
T 1onl_A 30 YAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLKP 105 (128)
T ss_dssp HHHHHHCSEEEEECBCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEECTHHHHCTTHHHHCTTTTTCCEEEEE
T ss_pred HHhhcCCCceEEEecCCCCEEeCCCEEEEEEEcceeeEEecCCCeEEEEEhhhhccChhhhccCCCCCccEEEEEE
Confidence 45688999998887 99999999999999999999999999999999999864 56666 5565 7777763
No 103
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=98.24 E-value=1.2e-06 Score=96.21 Aligned_cols=69 Identities=25% Similarity=0.460 Sum_probs=62.5
Q ss_pred CeeecCCcceeeEEec-CCCCeeeCCCeEEEEEe----------------------------------------------
Q psy15251 650 SKVVSPMPGMVDKVLV-QPGQAVKTGDPIMVIIA---------------------------------------------- 682 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v-~~G~~V~~g~~l~~~ea---------------------------------------------- 682 (720)
..|.++.+|+|.+++| ++||.|++||+|+.|++
T Consensus 122 ~~v~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~l~~aq~~~~~a~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~~~ 201 (413)
T 3ne5_B 122 AIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIAT 201 (413)
T ss_dssp EEECCSSCEEEEEECSCCTTCEECTTCEEEEEECCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEEecccCEEEEEEEeCCCCCEEcCCCEEEEEcCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 3689999999999999 99999999999999994
Q ss_pred --eeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 683 --MKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 683 --mkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
..-...|+||++|+|.++.+++|+.|.+|++|++|.
T Consensus 202 ~~~~~~~~I~AP~~G~V~~~~v~~G~~V~~G~~l~~I~ 239 (413)
T 3ne5_B 202 QKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQ 239 (413)
T ss_dssp TSCCCEEEEECSSSEEEEECCCCTTCEECTTSCSEEEE
T ss_pred ccccccEEEEcCCCeEEEEEEcCCCCEECCCCcEEEEe
Confidence 122568999999999999999999999999999885
No 104
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=98.20 E-value=3.3e-07 Score=94.96 Aligned_cols=69 Identities=20% Similarity=0.240 Sum_probs=61.3
Q ss_pred eeecCCcceeeEEecCCCCeeeCCCeEEEEEeee----------------------------------------------
Q psy15251 651 KVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMK---------------------------------------------- 684 (720)
Q Consensus 651 ~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamk---------------------------------------------- 684 (720)
.|.||++|+|.+++|++||.|++||+|+.|+.-.
T Consensus 24 ~v~a~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~~a 103 (277)
T 2f1m_A 24 EVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQA 103 (277)
T ss_dssp EECCSSCEEEEEECSCTTCEECTTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHHHH
T ss_pred EEEccccEEEEEEEcCCCCEecCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHH
Confidence 6899999999999999999999999999998631
Q ss_pred -------------------------eEEEEEcCCCeEEEEEEcCCCCcccCC--CeEEEEec
Q psy15251 685 -------------------------MEYVITSGTSGIIEEIFYAAGQSIQKN--QNLVKIVP 719 (720)
Q Consensus 685 -------------------------m~~~i~a~~~G~v~~~~~~~g~~v~~g--~~l~~i~~ 719 (720)
-...|+||++|+|..+.+++|+.|.+| ++|++|.+
T Consensus 104 ~~~~~~a~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~~~~~G~~v~~g~~~~l~~i~~ 165 (277)
T 2f1m_A 104 LADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQ 165 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCCSSCBTCEECTTCSSCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeEEcCCCCEEcCCCCceeEEEec
Confidence 024899999999999999999999999 58888753
No 105
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=98.20 E-value=1.4e-06 Score=93.73 Aligned_cols=70 Identities=23% Similarity=0.367 Sum_probs=63.1
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeee--------------------------------------------
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKM-------------------------------------------- 685 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm-------------------------------------------- 685 (720)
..|.||.+|+|.+++|++||.|++||+|+.|+.-..
T Consensus 58 ~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~l~~a~~~l~~a~a~l~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~ 137 (359)
T 3lnn_A 58 VKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSD 137 (359)
T ss_dssp EEECCSSCEEEEECCSCTTCEECTTCEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCTTHHHHHHH
T ss_pred EEEeccCCEEEEEEEcCCCCEEcCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 469999999999999999999999999999996421
Q ss_pred --------------------------------EEEEEcCCCeEEEEEEcCCCCcccC-CCeEEEEec
Q psy15251 686 --------------------------------EYVITSGTSGIIEEIFYAAGQSIQK-NQNLVKIVP 719 (720)
Q Consensus 686 --------------------------------~~~i~a~~~G~v~~~~~~~g~~v~~-g~~l~~i~~ 719 (720)
...|+||++|+|.++.+.+|+.|.+ |++|++|..
T Consensus 138 ~~~a~a~l~~a~~~l~~~~~~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~~v~~~g~~l~~i~~ 204 (359)
T 3lnn_A 138 YDQAASESQRADARLAQLGAKGGGTLQAGGGHILAVRSPINGRVVDLNAATGAYWNDTTASLMTVAD 204 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGBCSSTTSEEEEECSSCEEEEECCCCBTCEECCSSCCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCcchhhhhcccceEEEECCCCEEEEEeecCCCceeCCCCcceEEEec
Confidence 3689999999999999999999999 999998854
No 106
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A
Probab=98.18 E-value=2.4e-06 Score=76.48 Aligned_cols=50 Identities=20% Similarity=0.137 Sum_probs=45.5
Q ss_pred CCcceeeEEec-CCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCC
Q psy15251 655 PMPGMVDKVLV-QPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAA 704 (720)
Q Consensus 655 p~~g~v~~~~v-~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~ 704 (720)
.+.|.|+.+.. ++|++|++||++++||||||..+|.||.+|+|.+++-+.
T Consensus 29 ~~lGdiv~velp~vG~~v~~G~~~~~VES~K~~sdi~aPvsG~VvevN~~l 79 (125)
T 3klr_A 29 EALGDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKAL 79 (125)
T ss_dssp HHHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGG
T ss_pred hhCCCeEEEEeCCCCCEEcCCCEEEEEEEcceeeeeecCCCEEEEEEhhhh
Confidence 46788988877 899999999999999999999999999999999997654
No 107
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=98.15 E-value=1.3e-06 Score=93.23 Aligned_cols=70 Identities=20% Similarity=0.247 Sum_probs=61.5
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeee--------------------------------------------
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKM-------------------------------------------- 685 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm-------------------------------------------- 685 (720)
..|.+|.+|+|.+++|++||.|++||+|+.|+.-..
T Consensus 32 ~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~ 111 (341)
T 3fpp_A 32 VDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAV 111 (341)
T ss_dssp EECCCSSCEEEEEECCCTTCEECTTCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSS
T ss_pred EEEeccCCcEEEEEEeCCCCEECCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 368999999999999999999999999999986310
Q ss_pred -----------------------------------------EEEEEcCCCeEEEEEEcCCCCcccCCCe---EEEEec
Q psy15251 686 -----------------------------------------EYVITSGTSGIIEEIFYAAGQSIQKNQN---LVKIVP 719 (720)
Q Consensus 686 -----------------------------------------~~~i~a~~~G~v~~~~~~~g~~v~~g~~---l~~i~~ 719 (720)
...|+||++|+|.++.+.+|+.|.+|++ |+.|..
T Consensus 112 s~~~~~~a~~~~~~~~a~l~~~~a~l~~a~a~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~~ 189 (341)
T 3fpp_A 112 SQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLAD 189 (341)
T ss_dssp TTHHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHTTTTTTTTSSEEECSSSEEEEEESSCTTCEECCTTSCCCCEEEEC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCEEECCCCeEEEEEecCCCCEEecCCCCceEEEEec
Confidence 1569999999999999999999999987 887753
No 108
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=97.99 E-value=1.8e-06 Score=93.37 Aligned_cols=69 Identities=20% Similarity=0.263 Sum_probs=61.2
Q ss_pred eeecCCcceeeEEecCCCCeeeCCCeEEEEEeeee---------------------------------------------
Q psy15251 651 KVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKM--------------------------------------------- 685 (720)
Q Consensus 651 ~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm--------------------------------------------- 685 (720)
.|.+|++|+|.+++|++||.|++||+|+.|+.-..
T Consensus 45 ~v~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~~~~~R~~~L~~~g~is~~~~~~a~~~~~~a 124 (369)
T 1vf7_A 45 EVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQS 124 (369)
T ss_dssp EECCSSCEEEEECCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred EEEeeCceEEEEEEcCCCCEEcCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999985211
Q ss_pred ------------EEEEEcCCCeEEEEEEcCCCCcccCC--CeEEEEec
Q psy15251 686 ------------EYVITSGTSGIIEEIFYAAGQSIQKN--QNLVKIVP 719 (720)
Q Consensus 686 ------------~~~i~a~~~G~v~~~~~~~g~~v~~g--~~l~~i~~ 719 (720)
...|+||++|+|.++.+++|+.|.+| ++|++|..
T Consensus 125 ~a~l~~a~~~l~~~~I~AP~~G~V~~~~v~~G~~V~~g~g~~l~~i~~ 172 (369)
T 1vf7_A 125 KAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQ 172 (369)
T ss_dssp HHHHHHHHHHHHTTEEECSSSEEECCCSSCBTCEECTTCSSCSEEEEC
T ss_pred HHHHHHHHHhhcCCEEECCCCeEEEEEEcCCCCeEcCCCCceeEEEec
Confidence 25899999999999999999999995 88988753
No 109
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=97.97 E-value=1e-05 Score=73.78 Aligned_cols=50 Identities=22% Similarity=0.203 Sum_probs=44.3
Q ss_pred CcceeeEEec-CCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCC
Q psy15251 656 MPGMVDKVLV-QPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAG 705 (720)
Q Consensus 656 ~~g~v~~~~v-~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g 705 (720)
.-|.|+-+.. ++|++|++||++++|||||+..+|.||.+|+|++++-+..
T Consensus 52 ~LGdIvfVelP~vG~~v~~Gd~~~~VES~Ka~sdi~sPvsG~VvevN~~L~ 102 (143)
T 3mxu_A 52 QLGDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAALA 102 (143)
T ss_dssp HHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGG
T ss_pred hcCCeEEEEcCCCCCEeeCCCEEEEEEecceeeeeecCcceEEEEEhhhhh
Confidence 4577877765 8999999999999999999999999999999999986543
No 110
>3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum}
Probab=97.95 E-value=8.6e-06 Score=73.95 Aligned_cols=49 Identities=20% Similarity=0.167 Sum_probs=44.2
Q ss_pred cCCcceeeEEec-CCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEc
Q psy15251 654 SPMPGMVDKVLV-QPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFY 702 (720)
Q Consensus 654 ap~~g~v~~~~v-~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~ 702 (720)
...-|.|+-+.. ++|++|++||++++||+||+..+|.||.+|+|++++-
T Consensus 45 q~~lGdiv~VelP~vG~~v~~G~~~~~VES~K~~sdi~sPvsG~VvevN~ 94 (137)
T 3tzu_A 45 VEALGDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVNT 94 (137)
T ss_dssp HHHHCSEEEEECCCTTCEECTTSEEEEEEESSEEEEEECSEEEEEEEECH
T ss_pred HhhcCCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEehh
Confidence 346788988766 8999999999999999999999999999999999864
No 111
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=97.88 E-value=8.4e-06 Score=76.54 Aligned_cols=67 Identities=22% Similarity=0.421 Sum_probs=59.8
Q ss_pred CCCeeecCCcceeeEEecCCCCeeeC----CCeEEEEEeeeeEEEEEcCCCeEEEEE-----------------------
Q psy15251 648 DPSKVVSPMPGMVDKVLVQPGQAVKT----GDPIMVIIAMKMEYVITSGTSGIIEEI----------------------- 700 (720)
Q Consensus 648 ~~~~v~ap~~g~v~~~~v~~G~~V~~----g~~l~~~eamkm~~~i~a~~~G~v~~~----------------------- 700 (720)
....|.||+.|+|+.+ -+..|.|-+ |+.+++..+ ++.++||++|+|+.+
T Consensus 11 ~~~~i~aP~~G~vv~l-~~v~D~vfs~~~~G~Giai~p~---~~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHIGi 86 (162)
T 1ax3_A 11 GEEVFVSPITGEIHPI-TDVPDQVFSGKMMGDGFAILPS---EGIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGI 86 (162)
T ss_dssp CCSSCCCCCSEEEEEG-GGSSSHHHHTCTTSEEEEEEEC---SSEEEESCCEEEEECCSSSSEEEEESSSSCEEEEECSS
T ss_pred CCCEEEecCceEEEEe-EECCCccccccceeceEEEEeC---CCcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECc
Confidence 4457999999999998 778888877 899998887 789999999999988
Q ss_pred ------------EcCCCCcccCCCeEEEEe
Q psy15251 701 ------------FYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 701 ------------~~~~g~~v~~g~~l~~i~ 718 (720)
++++||.|.+|++|+++.
T Consensus 87 dTV~l~G~gF~~~V~~Gd~V~~G~~L~~~d 116 (162)
T 1ax3_A 87 DTVSLKGEGFTSFVSEGDRVEPGQKLLEVD 116 (162)
T ss_dssp STTTTTTTTEEESCCCCSEECSEEEEEEEC
T ss_pred cchhcCCCccEEEEeCCCEEcCCCEEEEEC
Confidence 889999999999999885
No 112
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=97.82 E-value=1.5e-05 Score=74.76 Aligned_cols=65 Identities=17% Similarity=0.332 Sum_probs=58.5
Q ss_pred CeeecCCcceeeEEecCCCCeeeC----CCeEEEEEeeeeEEEEEcCCCeEEEEE-------------------------
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKT----GDPIMVIIAMKMEYVITSGTSGIIEEI------------------------- 700 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~----g~~l~~~eamkm~~~i~a~~~G~v~~~------------------------- 700 (720)
..|.||++|+|+.+. +..|.|-+ |+.+++..+ ++.++||++|+|+.+
T Consensus 13 ~~i~aP~~G~vv~l~-~v~D~vfs~~~~G~Giai~p~---~~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidT 88 (161)
T 1f3z_A 13 IEIIAPLSGEIVNIE-DVPDVVFAEKIVGDGIAIKPT---GNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDT 88 (161)
T ss_dssp EEEECSSCEEEEEGG-GSSSHHHHTTSSCEEEEEEEC---SSEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSG
T ss_pred cEEEecCCeEEEEeE-ECCCccccccceeCeEEEEeC---CCcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccc
Confidence 469999999999987 78888877 899988887 478999999999999
Q ss_pred ----------EcCCCCcccCCCeEEEEe
Q psy15251 701 ----------FYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 701 ----------~~~~g~~v~~g~~l~~i~ 718 (720)
++++||.|.+|++|+++.
T Consensus 89 V~l~G~gF~~~V~~Gd~V~~G~~L~~~d 116 (161)
T 1f3z_A 89 VELKGEGFKRIAEEGQRVKVGDTVIEFD 116 (161)
T ss_dssp GGGTTTTEEECSCTTCEECTTCEEEEEC
T ss_pred hhcCCCccEEEEeCcCEECCCCEEEEEC
Confidence 899999999999999885
No 113
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=97.80 E-value=1.4e-05 Score=74.37 Aligned_cols=65 Identities=20% Similarity=0.250 Sum_probs=58.2
Q ss_pred CeeecCCcceeeEEecCCCCeeeC----CCeEEEEEeeeeEEEEEcCCCeEEEE--------------------------
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKT----GDPIMVIIAMKMEYVITSGTSGIIEE-------------------------- 699 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~----g~~l~~~eamkm~~~i~a~~~G~v~~-------------------------- 699 (720)
..|.||++|+|+.+. ++.|.|-+ |+.+++..+ ++.++||++|+|+.
T Consensus 8 ~~i~aP~~G~vv~l~-~v~D~vf~~~~~G~Giai~p~---~~~v~AP~~G~V~~v~~t~HAigi~~~~G~evLiHiGidT 83 (154)
T 2gpr_A 8 LKVLAPCDGTIITLD-EVEDEVFKERMLGDGFAINPK---SNDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILLHIGLDT 83 (154)
T ss_dssp EEEECSSSEEEECGG-GSSCHHHHTTSSCEEEEEEES---SSEEECSSCEEEEECCTTCSEEEEECTTSCEEEEECSSSG
T ss_pred CEEEecCCeEEEEee-ECCCccccccceeCeEEEEeC---CCcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECcch
Confidence 469999999999985 88898887 899998887 47999999999998
Q ss_pred ---------EEcCCCCcccCCCeEEEEe
Q psy15251 700 ---------IFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 700 ---------~~~~~g~~v~~g~~l~~i~ 718 (720)
+++++||.|++|++|+++.
T Consensus 84 v~l~G~gF~~~V~~Gd~V~~G~~L~~~d 111 (154)
T 2gpr_A 84 VSLDGNGFESFVTQDQEVNAGDKLVTVD 111 (154)
T ss_dssp GGGTTCSEEECCCTTCEECTTCEEEEEC
T ss_pred hhcCCCceEEEEcCCCEEcCCCEEEEEC
Confidence 4899999999999999885
No 114
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=97.74 E-value=2.2e-06 Score=92.56 Aligned_cols=68 Identities=29% Similarity=0.393 Sum_probs=59.7
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeee--------------------------------------------
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKM-------------------------------------------- 685 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm-------------------------------------------- 685 (720)
..|.+|.+|+|.+++|++||.|++||+|+.|+.-..
T Consensus 33 ~~v~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~ 112 (369)
T 4dk0_A 33 VDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQKAT 112 (369)
T ss_dssp CCBCCCSCSBCCEECCCTTSCCCSSCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSSCS
T ss_pred EEEecCCCcEEEEEEECCCCEECCCCEEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999999999999986320
Q ss_pred -----------------------------------------EEEEEcCCCeEEEEEEcCCCCcccCCCe---EEEE
Q psy15251 686 -----------------------------------------EYVITSGTSGIIEEIFYAAGQSIQKNQN---LVKI 717 (720)
Q Consensus 686 -----------------------------------------~~~i~a~~~G~v~~~~~~~g~~v~~g~~---l~~i 717 (720)
...|+||++|+|.++.+++|+.|.+|++ |+.|
T Consensus 113 s~~~~~~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i 188 (369)
T 4dk0_A 113 SLDTLNTAKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKV 188 (369)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCSCCSCCCBCCCCTTCBCCTTTSCCCCBBC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEEeeCCCCCCccCCCCcceEEEE
Confidence 1359999999999999999999999998 6655
No 115
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*
Probab=97.74 E-value=0.00025 Score=75.82 Aligned_cols=157 Identities=22% Similarity=0.355 Sum_probs=91.9
Q ss_pred CCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccC-------Cc--eEEEEEEEcccccEE
Q psy15251 158 GYPLMIKAVRGGGGKGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQS-------PR--HIEVQIIGDRYGNYV 228 (720)
Q Consensus 158 g~PvvvKp~~g~Gg~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g-------~~--~~~v~v~~d~~G~~v 228 (720)
+.++|+||..|+.|+|++++++.+++.+.++.. ...+++|+||+. ++ ++.+-++..+--. +
T Consensus 147 ~~~wI~KP~~~srG~GI~l~~~~~~i~~~~~~~---------~~~~VvQkYI~~PlLi~~~grKFDlR~Yvlvts~l~-v 216 (380)
T 3tig_A 147 GNVWIAKSSSGAKGEGILISSDATELLDFIDNQ---------GQVHVIQKYLESPLLLEPGHRKFDIRSWVLVDNQYN-I 216 (380)
T ss_dssp CCCEEEEESCC----CCBCCSCSHHHHHHHHHH---------TSCEEEEECCSSBCCBTTTTBCEEEEEEEEECTTCC-E
T ss_pred CCeEEEeCCccCCCCCEEEeCCHHHHHHHHhcc---------CCcEEEEecccCceeecCCCceeEEEEEEEEcCCCE-E
Confidence 578999999999999999999999988776531 468999999973 44 3444444433111 2
Q ss_pred EEE----eeecc-------------------cccccee-EE--EEcCC---------------CCCCHHHHHHHHHHHHH
Q psy15251 229 YLY----ERDCS-------------------VQRRHQK-II--EEAPA---------------PGISSEFRSRLGSTGVQ 267 (720)
Q Consensus 229 ~~~----~r~~s-------------------~~r~~~k-~~--e~~Pa---------------~~l~~~~~~~l~~~a~~ 267 (720)
+++ -|-|+ +|..+.. .. +..-- ......+..+|.+....
T Consensus 217 y~y~~g~~Rfa~~~y~~~~~~~~~~HLTN~~iqk~~~~~y~~~~~g~~~~~~~f~~yL~~~~~~~~~~~i~~~I~~ii~~ 296 (380)
T 3tig_A 217 YLYREGVLRTSSEPYSDTNFQDMTSHLTNHCIQKEHSKNYGRYEEGNEMFFEEFNQYLVTSLNINLENSILCQIKEIIRV 296 (380)
T ss_dssp EECSCCEEEECC----------------------------------CCBCHHHHHHHHSTTSSCCHHHHTHHHHHHHHHH
T ss_pred EEEcCCEEEecCCCcCccchhhhhhhccccccccccccccccccCCCcCcHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 221 11121 1111100 00 00000 00113455566666655
Q ss_pred HHHH----c-----CC--cceeEEEEEEeCCCCcEEEEEecCCCCcccccccccccCcHHHHHHHHHcCCCCCC
Q psy15251 268 VARA----V-----RY--HNAGTVEFIMDPSSGEFYFMEMNTRLQVEHPVSEMITGVDLVQWQLMVASGQELPL 330 (720)
Q Consensus 268 i~~a----l-----g~--~G~~~vEf~~~~~~g~~~~iEiNpR~~~~~~~~e~~tGvdl~~~~l~~a~G~~l~~ 330 (720)
.+.+ + ++ .....+||++| ++.++++||||..++-...++ -+|++..++++...-.+.
T Consensus 297 ~l~a~~~~i~~~~~~~~~FEl~G~D~lid-~~l~~wllEVN~~P~~~q~~i-----~~l~~~~~~iavdp~f~~ 364 (380)
T 3tig_A 297 CLSCLEPAISTKYLPYHSFQLFGFDFMVD-KNLKVWLIEVNGAPACAQKLY-----AELCKGIVDLAISSVFPL 364 (380)
T ss_dssp HHHHHHHHHCCTTSSSEECEEEEEEEEEB-TTCCEEEEEEESSCCCCTTTH-----HHHHHHHHHHTTTTTSCC
T ss_pred HHHHHHHHhhhcccCCceEEEEeEEEEEc-CCCcEEEEEEeCCCCccHHhH-----HHHHHHHHHHhcccccCC
Confidence 5543 2 12 35888999999 889999999999998654333 357888899888765543
No 116
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=97.56 E-value=0.00015 Score=77.72 Aligned_cols=66 Identities=15% Similarity=0.164 Sum_probs=59.3
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEEee----eeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAM----KMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eam----km~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
.-++||.+| +++..++.||.|++||+|+.++.| +++.+|+||.+|+|.... ....|..|+.|+.|.
T Consensus 268 ~~v~A~~~G-~~~~~~~~g~~V~~G~~La~i~d~~~~g~~~~~v~Ap~dG~v~~~~--~~~~V~~Gd~l~~ia 337 (354)
T 3cdx_A 268 AYVMAPRTG-LFEPTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFGA--GPGRVTRGDAVAVVM 337 (354)
T ss_dssp GEEECSSCE-EEEESCCTTCEECTTSEEEEEECTTSSSCCCEEEECCSCEEEEEEE--CSSEECTTCEEEEEE
T ss_pred EEEECCCCE-EEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEcCCCeEEEEEe--CCCccCCCCEEEEEe
Confidence 468999999 677789999999999999999996 899999999999998664 788999999999885
No 117
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=97.56 E-value=0.00011 Score=67.76 Aligned_cols=47 Identities=23% Similarity=0.164 Sum_probs=41.9
Q ss_pred CcceeeEEec-CCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEc
Q psy15251 656 MPGMVDKVLV-QPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFY 702 (720)
Q Consensus 656 ~~g~v~~~~v-~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~ 702 (720)
.-|.|+-|.. ++|++|++|+++++||++|.-.+|.||.+|+|++++-
T Consensus 57 ~LGdIvfVeLP~vG~~v~~Gd~~~~VESvKa~sdi~sPvsG~VvevN~ 104 (155)
T 3hgb_A 57 ALGDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVNS 104 (155)
T ss_dssp HHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECT
T ss_pred hcCCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEEhh
Confidence 4577776655 8999999999999999999999999999999999874
No 118
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=97.36 E-value=0.00049 Score=72.86 Aligned_cols=69 Identities=14% Similarity=0.172 Sum_probs=58.7
Q ss_pred CCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEee----eeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 648 DPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAM----KMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 648 ~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eam----km~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
...-|+||.+| ++...|+.||.|++||+|+.|..+ +.+.+|+||.+|+|.... ..-.|.+|+.|+.|..
T Consensus 256 ~~~~v~A~~~G-l~~~~v~~Gd~V~~G~~la~I~dp~~~g~~~~~v~Ap~dGiVi~~~--~~~~V~~G~~l~~Ia~ 328 (331)
T 3na6_A 256 GDCYLFSEHDG-LFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRH--FPGMIKSGDCAAVIGV 328 (331)
T ss_dssp SCCCEECSSCE-EEEESSCTTCEECTTCEEEEEECSSCSSCCCEEEECSSSEEEEEEE--CSSEECTTCEEEEEEC
T ss_pred CcEEEeCCCCe-EEEEcCCCCCEEcCCCEEEEEEcCccCCCeeEEEEcCCCEEEEEEe--CCCccCCCCEEEEEec
Confidence 34579999999 555679999999999999999996 568999999999998764 4578899999998853
No 119
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.98 E-value=0.00022 Score=61.72 Aligned_cols=46 Identities=11% Similarity=0.130 Sum_probs=42.2
Q ss_pred CCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 674 GDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 674 g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
|+.++.+|.|+....|.||.+|+|.++.+++||.|++|++|++|+.
T Consensus 5 ~g~~~~~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le~ 50 (100)
T 2dn8_A 5 SSGTCVFEKENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEV 50 (100)
T ss_dssp CCCCCCCCCCCCTTEEECSSCEEEEEESSCTTEEECTTCEEEEEEE
T ss_pred CCEEEEEEcCCCCcEEeCCCCEEEEEEEcCCcCEECCCCEEEEEEe
Confidence 4556888999999999999999999999999999999999999973
No 120
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=96.95 E-value=0.0015 Score=70.01 Aligned_cols=67 Identities=24% Similarity=0.323 Sum_probs=57.8
Q ss_pred CCeeecCCcceeeEEecCCCCeeeCCCeEEEEEe------eeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 649 PSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIA------MKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 649 ~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~ea------mkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
..-|+||.+|.+. ..|+.||.|++||+|+.|.. -....+|+||.+|+|... ...-.|.+|+.|+.|-
T Consensus 290 ~~~v~A~~~Gl~~-~~v~lGd~V~kG~~la~I~d~~~~g~g~~~~~v~Ap~dGiVi~~--~~~p~V~~G~~l~~i~ 362 (368)
T 3fmc_A 290 YRKFHAPKAGMVE-YLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVPILH--FASASVHQGTELYKVM 362 (368)
T ss_dssp EEEEECSSCEEEE-ECSCTTCCBCTTCEEEEEECGGGTTSSCSEEEEECSSSEEEEEE--CSSSEECTTCEEEEEE
T ss_pred cEEEecCCCEEEE-EeCCCCCEeCCCCEEEEEEcCCCCCCCCeeEEEEcCCCEEEEEE--eCCCccCCCCEEEEEe
Confidence 3468999999665 78999999999999999998 457799999999999765 4668999999999875
No 121
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=96.95 E-value=0.00083 Score=73.08 Aligned_cols=110 Identities=15% Similarity=0.111 Sum_probs=78.7
Q ss_pred HHHHHHHHHHCCC---C-CCC--ccc-CCCCCHHHHHHHHHHhC-CcEEEeecCCCCC----cceEEeCCHHHHHHHHHH
Q psy15251 122 KSTSKEIMIKAEV---P-VIP--GYH-GEDQNEEILMEQAERIG-YPLMIKAVRGGGG----KGMRIVRDSANFLAQLRS 189 (720)
Q Consensus 122 K~~~r~~l~~~Gv---p-~p~--~~~-~~~~s~~e~~~~~~~ig-~PvvvKp~~g~Gg----~Gv~~v~~~~el~~~~~~ 189 (720)
-+..|+++.++++ | +.| +.. ....+.+++.+.++++| ||||+|+..-.|+ -||++..+.+|+.+++.+
T Consensus 8 Ey~~K~ll~~~~~~~~~~~~~~~~~~~~~~~~~~eA~~~a~~lg~~pvVvKaqv~~ggRgk~GGV~l~~s~eev~~aa~~ 87 (425)
T 3mwd_A 8 EQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKP 87 (425)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCGGGGTSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHHTT
T ss_pred HHHHHHHHHHhccccCCccCCcceEEeCCCCCHHHHHHHHHHhCCCCEEEEeccccCCCCcCCeEEEECCHHHHHHHHHH
Confidence 3678999999999 4 222 322 12456789988899998 9999999773322 389999999999988877
Q ss_pred HHHHHHhcCC----CCcEEEeccccC--CceEEEEEEEcccccEEEEE
Q psy15251 190 AQRESQSAFN----DSKVLLEKYIQS--PRHIEVQIIGDRYGNYVYLY 231 (720)
Q Consensus 190 ~~~~~~~~f~----~~~~lvEeyI~g--~~~~~v~v~~d~~G~~v~~~ 231 (720)
+......... -..++||++++. .+|+-+.+..|..|.++.+.
T Consensus 88 ml~~~~~~~~~~~~v~~vlVe~~~~~~~~~E~ylgi~~Dr~gpvI~~s 135 (425)
T 3mwd_A 88 RLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFH 135 (425)
T ss_dssp TTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEE
T ss_pred HHhhhhhccCCCceEEEEEEEecccCCCCceEEEEEEecCCCCEEEEE
Confidence 6533221100 146999999974 48999999999887666553
No 122
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=96.63 E-value=0.0016 Score=76.20 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=79.9
Q ss_pred HHHHHHHHHHCCCC------CCCccc-CCCCCHHHHHHHHHHhC-CcEEEeecCCCCCc----ceEEeCCHHHHHHHHHH
Q psy15251 122 KSTSKEIMIKAEVP------VIPGYH-GEDQNEEILMEQAERIG-YPLMIKAVRGGGGK----GMRIVRDSANFLAQLRS 189 (720)
Q Consensus 122 K~~~r~~l~~~Gvp------~p~~~~-~~~~s~~e~~~~~~~ig-~PvvvKp~~g~Gg~----Gv~~v~~~~el~~~~~~ 189 (720)
-+..|+++.++++| .+++.. ...++.+++.+.++.+| +|+|+|+..-.||| ||++..|.+|+.+++.+
T Consensus 8 Ey~aK~ll~~~~~~~~~~~~~~~~~~v~~~~~~~eA~~aa~~lg~~pvVvKaQv~~GgRGKaGGVkL~~s~eEa~~aa~~ 87 (829)
T 3pff_A 8 EQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKP 87 (829)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCTHHHHSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHHTT
T ss_pred HHHHHHHHHHhCccccccccCCceEEeCCCCCHHHHHHHHHHhCCCCEEEEecccccCCCcCCeEEEECCHHHHHHHHHH
Confidence 46789999999998 345433 12345678887888887 99999997765544 78999999999998877
Q ss_pred HHHHHHhc-CC---CCcEEEeccccC--CceEEEEEEEcccccEEEEE
Q psy15251 190 AQRESQSA-FN---DSKVLLEKYIQS--PRHIEVQIIGDRYGNYVYLY 231 (720)
Q Consensus 190 ~~~~~~~~-f~---~~~~lvEeyI~g--~~~~~v~v~~d~~G~~v~~~ 231 (720)
+....... .. -..++||++++. .+|+-+.+..|..|.++.+.
T Consensus 88 iLg~~~~~~~p~~~V~gvLVE~m~~~~~~~ElYvgI~~Dr~gpvIm~s 135 (829)
T 3pff_A 88 RLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFH 135 (829)
T ss_dssp TTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhcCCCceEEEEEEEecccCCCccEEEEEEEecCCCCEEEEE
Confidence 65432210 00 146999999974 48999999999887666553
No 123
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=96.17 E-value=0.0041 Score=49.77 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=29.9
Q ss_pred EEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 688 VITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 688 ~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
.|+||.+|+|.++.+++||.|++|++|++|+.
T Consensus 1 ~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~ 32 (72)
T 1z6h_A 1 TVSIQMAGNLWKVHVKAGDQIEKGQEVAILES 32 (72)
T ss_dssp CEECCSSEEEEEECCCTTCEECTTCEEEEEEE
T ss_pred CEECcccEEEEEEEcCCcCEECCCCEEEEEEC
Confidence 37899999999999999999999999999974
No 124
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=96.10 E-value=0.002 Score=53.60 Aligned_cols=32 Identities=13% Similarity=0.264 Sum_probs=30.3
Q ss_pred EEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 688 VITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 688 ~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
.|+||.+|+|.++.+++|+.|.+|++|++|+.
T Consensus 7 ~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie~ 38 (84)
T 2kcc_A 7 VLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEV 38 (84)
T ss_dssp EECCSSSCCEEEESSCTTEEECTTCEEEEEEC
T ss_pred eEECCCCEEEEEEECCCCCEECCCCEEEEEEe
Confidence 49999999999999999999999999999974
No 125
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=96.09 E-value=0.0045 Score=50.80 Aligned_cols=32 Identities=31% Similarity=0.590 Sum_probs=29.9
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEE
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVII 681 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~e 681 (720)
..|+||..|+|.++++++|+.|.+||+|+.|+
T Consensus 49 ~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 49 NQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp EEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred EEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 36999999999999999999999999999875
No 126
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=96.05 E-value=0.0062 Score=48.91 Aligned_cols=33 Identities=15% Similarity=0.341 Sum_probs=30.9
Q ss_pred EEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 687 YVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 687 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
..|.||.+|+|.++.+++||.|++|++|++++.
T Consensus 6 ~~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~ 38 (74)
T 2d5d_A 6 NVVSAPMPGKVLRVLVRVGDRVRVGQGLLVLEA 38 (74)
T ss_dssp CEEECSSCEEEEEECCCTTCEECTTCEEEEEEE
T ss_pred eEEecCCCEEEEEEEcCCCCEeCCCCEEEEEec
Confidence 468999999999999999999999999999974
No 127
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.04 E-value=0.05 Score=57.36 Aligned_cols=102 Identities=12% Similarity=0.022 Sum_probs=64.0
Q ss_pred CCCccCC--CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccc-------cccEEEEeCCCCCcccccCHH
Q psy15251 1 MTIASCV--LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVK-------MADEAYRLEGKSSLDTYLNQA 70 (720)
Q Consensus 1 m~~~~~~--~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~-------~aD~~~~i~~~~~~~~~~~~~ 70 (720)
|+++..+ +++|||.|+ |.++..+++.+.+.|++++++..+......... .--+.+. .++.|.+
T Consensus 1 M~~s~~~M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~-------~Dl~d~~ 73 (346)
T 3i6i_A 1 MTVSPVPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVY-------GLINEQE 73 (346)
T ss_dssp ----------CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEE-------CCTTCHH
T ss_pred CCCCCCCCCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEE-------eecCCHH
Confidence 6655433 358999997 999999999999999999888654422111110 1112222 2667889
Q ss_pred HHHHHHHHcCCCEEEeCCCCC--cccHHHHHHHHHCC-CeEe
Q psy15251 71 KILDIAVRSQCQAIHPGYGFL--SENAEFANAVEGNR-LIFV 109 (720)
Q Consensus 71 ~i~~~a~~~~~daI~pg~g~l--sE~~~~a~~~~~~g-l~~~ 109 (720)
.+.++.++.++|+|+-..+.. .....+.+++.+.| +..+
T Consensus 74 ~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 74 AMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp HHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred HHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 999999988999998776642 11235667777777 6543
No 128
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=95.99 E-value=0.0054 Score=49.88 Aligned_cols=32 Identities=34% Similarity=0.556 Sum_probs=30.3
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEE
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVII 681 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~e 681 (720)
..|+||.+|+|.++++++||.|..||+|+.|+
T Consensus 45 ~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 45 VKIPSPVRGKIVKILYREGQVVPVGSTLLQID 76 (77)
T ss_dssp EECCCCCCEEEEEECCCTTCEECSCSEEEEEE
T ss_pred EEEECCCCEEEEEEEeCCcCEECCCCEEEEEE
Confidence 47999999999999999999999999999986
No 129
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=95.86 E-value=0.0052 Score=50.38 Aligned_cols=33 Identities=36% Similarity=0.587 Sum_probs=31.1
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEEe
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIA 682 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~ea 682 (720)
..|+||.+|+|.++++++||.|.+||+|+.|+.
T Consensus 44 ~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~ 76 (80)
T 1qjo_A 44 MEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEV 76 (80)
T ss_dssp EEEEBSSCEEEEECCCCTTCEECTTCCCEEEES
T ss_pred EEEeCCCCEEEEEEecCCCCEECCCCEEEEEEc
Confidence 479999999999999999999999999999974
No 130
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=95.86 E-value=0.0081 Score=49.12 Aligned_cols=33 Identities=36% Similarity=0.554 Sum_probs=30.9
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEEe
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIA 682 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~ea 682 (720)
..|+||.+|+|.++++++|+.|..|++|+.|+.
T Consensus 42 ~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~~ 74 (79)
T 1iyu_A 42 MEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEP 74 (79)
T ss_dssp EEEECSSSSEEEEESCCTTCEEETTSEEEEEEC
T ss_pred EEEECCCCEEEEEEEeCCCCEECCCCEEEEEec
Confidence 469999999999999999999999999999875
No 131
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=95.86 E-value=0.0063 Score=49.38 Aligned_cols=34 Identities=18% Similarity=0.354 Sum_probs=31.4
Q ss_pred EEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 686 EYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 686 ~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
+..|.||.+|+|.++.+++|+.|++|++|++|+.
T Consensus 8 ~~~v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~~ 41 (77)
T 1dcz_A 8 EGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEA 41 (77)
T ss_dssp SSEEEBSSSCEEEEECCCTTCEECTTSEEEEEEE
T ss_pred CeEEECCCCEEEEEEEcCCcCEEcCCCEEEEEEc
Confidence 3578999999999999999999999999999974
No 132
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=95.81 E-value=0.019 Score=60.63 Aligned_cols=65 Identities=18% Similarity=0.264 Sum_probs=55.6
Q ss_pred eeecCCcceeeEEecCCCCeeeCCCeEEEEEe----eeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 651 KVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIA----MKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 651 ~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~ea----mkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
-++||..|.+. ..++.|+.|++||+|+.+-. .+...+|+||.+|+|.-.. ..-.|..|+.|+.|.
T Consensus 259 ~~~a~~~G~~~-~~~~~g~~V~~G~~la~i~dp~~~G~~~~~v~Ap~dGiv~~~~--~~p~V~~Gd~l~~ia 327 (332)
T 2qj8_A 259 QLKSPSPGIFE-PRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAIR--SAMYVQGNEEVAILA 327 (332)
T ss_dssp EEECSSSEEEE-ECSCTTCEECTTCEEEEEECTTCSSSCCEEEECSSSEEEEEEE--CSEEECTTCEEEEEE
T ss_pred EEeCCCCeEEE-EeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEeCCCeEEEEEe--CCCeeCCCCEEEEEe
Confidence 57899999665 77999999999999999976 6788999999999997654 667889999998874
No 133
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.67 E-value=0.03 Score=48.57 Aligned_cols=97 Identities=15% Similarity=0.113 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcC-CcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMG-IRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G-~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.|+++|+|+|.|.++..+++.+.+.| +++++++.+++........--..+.. +..+.+.+.++.+ ++|.|
T Consensus 3 ~~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-------d~~~~~~~~~~~~--~~d~v 73 (118)
T 3ic5_A 3 AMRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQV-------DAKDEAGLAKALG--GFDAV 73 (118)
T ss_dssp TTCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEEC-------CTTCHHHHHHHTT--TCSEE
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEe-------cCCCHHHHHHHHc--CCCEE
Confidence 35679999999999999999999999 88777754332111101011122221 4456666666553 78988
Q ss_pred EeCCCCCcccHHHHHHHHHCCCeEeCCC
Q psy15251 85 HPGYGFLSENAEFANAVEGNRLIFVGPS 112 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~gl~~~Gp~ 112 (720)
+-..+.. ....+...+.+.|+.++..+
T Consensus 74 i~~~~~~-~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 74 ISAAPFF-LTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp EECSCGG-GHHHHHHHHHHTTCEEECCC
T ss_pred EECCCch-hhHHHHHHHHHhCCCEEEec
Confidence 8766533 23567778888888876533
No 134
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=95.65 E-value=0.0079 Score=50.01 Aligned_cols=35 Identities=34% Similarity=0.539 Sum_probs=32.2
Q ss_pred CCeeecCCcceeeEEecCCCCeeeCCCeEEEEEee
Q psy15251 649 PSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAM 683 (720)
Q Consensus 649 ~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eam 683 (720)
...|+||+.|+|.++++++|+.|..|++|+.|+..
T Consensus 39 ~~~i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~~~ 73 (85)
T 2k7v_A 39 SMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVE 73 (85)
T ss_dssp EEEEECSSCBCCCEECSCTTCCBCTTSEEEEEECC
T ss_pred EEEEECCCCEEEEEEEeCCCCEECCCCEEEEEEcC
Confidence 34799999999999999999999999999999864
No 135
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=95.53 E-value=0.01 Score=48.51 Aligned_cols=33 Identities=15% Similarity=0.380 Sum_probs=30.7
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEEe
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIA 682 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~ea 682 (720)
..|+||.+|+|.++++++||.|..||+|+.|+.
T Consensus 45 ~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 45 MEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp EEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred EEEEcCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 469999999999999999999999999999863
No 136
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=95.52 E-value=0.011 Score=54.95 Aligned_cols=52 Identities=12% Similarity=0.178 Sum_probs=33.8
Q ss_pred EecCCCCeeeCCCeEEEEEeee---------eEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEE
Q psy15251 663 VLVQPGQAVKTGDPIMVIIAMK---------MEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKI 717 (720)
Q Consensus 663 ~~v~~G~~V~~g~~l~~~eamk---------m~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i 717 (720)
++|++||+|++||+|+.+.-.+ .-..++- .+ ...+....+..|..|+.|+.+
T Consensus 93 ~~V~~Gd~V~~G~~L~~~d~~~i~~~g~~~~t~vvvtn-~~--~~~~~~~~~~~v~~g~~~~~~ 153 (154)
T 2gpr_A 93 SFVTQDQEVNAGDKLVTVDLKSVAKKVPSIKSPIIFTN-NG--GKTLEIVKMGEVKQGDVVAIL 153 (154)
T ss_dssp ECCCTTCEECTTCEEEEECHHHHHHHSSCCCEEEEEEE-CS--SCCCSCBCCEEECTTCEEEEE
T ss_pred EEEcCCCEEcCCCEEEEECHHHHHhcCCCCeEEEEEEC-CC--cceEEEccCceEcCCCEEEEe
Confidence 5899999999999999887322 1122222 11 122333456778899998876
No 137
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=95.40 E-value=0.065 Score=62.16 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=30.3
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEE
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVII 681 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~e 681 (720)
..|+||..|+|.+++|++||.|+.||+|++||
T Consensus 650 ~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~ 681 (681)
T 3n6r_A 650 NILRAEKKGVVAKINASAGNSLAVDDVIMEFE 681 (681)
T ss_dssp EEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred eEEECCCCeEEEEEEeCCcCEeCCCCEEEEEC
Confidence 46999999999999999999999999999986
No 138
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.37 E-value=0.063 Score=55.71 Aligned_cols=123 Identities=12% Similarity=0.175 Sum_probs=73.8
Q ss_pred cCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCccc---cccc-EEEEeCCCCCcccccCHHHHHHHHHHc
Q psy15251 5 SCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHV---KMAD-EAYRLEGKSSLDTYLNQAKILDIAVRS 79 (720)
Q Consensus 5 ~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~---~~aD-~~~~i~~~~~~~~~~~~~~i~~~a~~~ 79 (720)
+.|+++|||.|+ |.++..+++.+.+.|++++++..++....... .... +.+. .++.|.+.+.++++
T Consensus 8 ~~m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~-------~Dl~d~~~l~~a~~-- 78 (318)
T 2r6j_A 8 NGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVK-------GELDEHEKLVELMK-- 78 (318)
T ss_dssp -CCCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEE-------CCTTCHHHHHHHHT--
T ss_pred cCCCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEE-------ecCCCHHHHHHHHc--
Confidence 446689999995 89999999999999999988865543111100 0011 2222 26677788877775
Q ss_pred CCCEEEeCCCCC--cccHHHHHHHHHCC-Ce-Ee----CCC-------HHHHHHhcCHHHHHHHHHHCCCCC
Q psy15251 80 QCQAIHPGYGFL--SENAEFANAVEGNR-LI-FV----GPS-------SEAIRNMGIKSTSKEIMIKAEVPV 136 (720)
Q Consensus 80 ~~daI~pg~g~l--sE~~~~a~~~~~~g-l~-~~----Gp~-------~~~i~~~~DK~~~r~~l~~~Gvp~ 136 (720)
++|+|+-..+.. .....+.+++.+.| +. |+ |.+ .........|..+.+++++.|++.
T Consensus 79 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~ 150 (318)
T 2r6j_A 79 KVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPY 150 (318)
T ss_dssp TCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred CCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCCe
Confidence 588888665432 11235566777766 53 33 210 001112246777777777777765
No 139
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=95.09 E-value=0.017 Score=48.98 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=30.9
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEEe
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIA 682 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~ea 682 (720)
..|.||..|+|.++++++|+.|..||+|+.|+.
T Consensus 48 ~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~~ 80 (93)
T 1k8m_A 48 VTITSRYDGVIKKLYYNLDDIAYVGKPLVDIET 80 (93)
T ss_dssp EECCCSSCEEEEEECCCSSCEECTTSEEEEEEC
T ss_pred EEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEec
Confidence 468999999999999999999999999999974
No 140
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.07 E-value=0.019 Score=52.20 Aligned_cols=92 Identities=10% Similarity=-0.048 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
.+|++++|+|.|.++..+++.+.+.|+++++++.+++........--..+. + +..+.+.+.+ +.-.++|+++
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~-g------d~~~~~~l~~-~~~~~~d~vi 75 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVI-A------DPTDESFYRS-LDLEGVSAVL 75 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE-C------CTTCHHHHHH-SCCTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEE-C------CCCCHHHHHh-CCcccCCEEE
Confidence 346799999999999999999999999999996544321111111112222 2 3344443333 2234688888
Q ss_pred eCCCCCcccHHHHHHHHHCC
Q psy15251 86 PGYGFLSENAEFANAVEGNR 105 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~~g 105 (720)
...+....|......+.+.+
T Consensus 76 ~~~~~~~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 76 ITGSDDEFNLKILKALRSVS 95 (141)
T ss_dssp ECCSCHHHHHHHHHHHHHHC
T ss_pred EecCCHHHHHHHHHHHHHhC
Confidence 76663322444444454444
No 141
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=95.07 E-value=0.021 Score=47.66 Aligned_cols=33 Identities=27% Similarity=0.472 Sum_probs=30.8
Q ss_pred CeeecCCcceeeEEecCCCC-eeeCCCeEEEEEe
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQ-AVKTGDPIMVIIA 682 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~-~V~~g~~l~~~ea 682 (720)
..|.||..|+|.++++++|+ .|..||+|+.|+.
T Consensus 49 ~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~~ 82 (87)
T 3crk_C 49 IGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVE 82 (87)
T ss_dssp EEEECCSCEEEEEESSCTTCCCEETTCEEEEEES
T ss_pred ceeecCcCcEEEEEEECCCCeEECCCCEEEEEEc
Confidence 46999999999999999999 8999999999974
No 142
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=94.79 E-value=0.031 Score=52.82 Aligned_cols=64 Identities=17% Similarity=0.364 Sum_probs=43.7
Q ss_pred eeecCCcceeeEEecCCCCeeeC----CCeEEEEEeeeeEEEEEcCCCeEEEEE--------------------------
Q psy15251 651 KVVSPMPGMVDKVLVQPGQAVKT----GDPIMVIIAMKMEYVITSGTSGIIEEI-------------------------- 700 (720)
Q Consensus 651 ~v~ap~~g~v~~~~v~~G~~V~~----g~~l~~~eamkm~~~i~a~~~G~v~~~-------------------------- 700 (720)
.|.||+.|+++.+. ++-|.|=+ |+-+++.=+ +..|.||++|+|+.+
T Consensus 36 ~i~aPv~G~vi~L~-eV~D~vFs~~~mGdG~AI~P~---~g~v~AP~dG~V~~vfpT~HAigi~s~~G~EvLIHIGiDTV 111 (183)
T 3our_B 36 EIIAPLSGEIVNIE-DVPDVVFAEKIVGDGIAIKPT---GNKMVAPVNGTIGKIFETNHAFSIESDDGVELFVHFGIDTV 111 (183)
T ss_dssp EEECSSCEEEEEGG-GSSCHHHHTTSSCEEEEEEEC---SSEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGG
T ss_pred EEEeecceEEEEch-hCcChHhcccCccCeEEEEcC---CCEEEeCCCeEEEEECCCCCEEEEEeCCCCEEEEEeccccc
Confidence 57777777776553 44454432 666666543 446777777777654
Q ss_pred ---------EcCCCCcccCCCeEEEEe
Q psy15251 701 ---------FYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 701 ---------~~~~g~~v~~g~~l~~i~ 718 (720)
++++||.|++|++|++++
T Consensus 112 ~L~G~gF~~~V~~Gd~Vk~Gd~L~~fD 138 (183)
T 3our_B 112 ELKGEGFTRIAEEGQTVKAGDTVIEFD 138 (183)
T ss_dssp GGTTTTEEECSCTTCEECTTCEEEEEC
T ss_pred ccCCccceEEEeCcCEEcCCCEEEEEC
Confidence 455899999999999885
No 143
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=94.66 E-value=0.014 Score=49.51 Aligned_cols=34 Identities=18% Similarity=0.344 Sum_probs=31.3
Q ss_pred EEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 686 EYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 686 ~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
+..|.||.+|+|.++.+++||.|++|++|++|+.
T Consensus 25 ~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~ 58 (94)
T 2jku_A 25 SSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEA 58 (94)
T ss_dssp CCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC
T ss_pred ceEEECCCCEEEEEEECCCCCEEcCCCEEEEEec
Confidence 4568999999999999999999999999999974
No 144
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=94.60 E-value=0.019 Score=53.73 Aligned_cols=55 Identities=22% Similarity=0.253 Sum_probs=32.1
Q ss_pred ecCCCCeeeCCCeEEEEEeee-------eEEEEEcCCCeEEEEEEcCCCCcccCCC-eEEEEe
Q psy15251 664 LVQPGQAVKTGDPIMVIIAMK-------MEYVITSGTSGIIEEIFYAAGQSIQKNQ-NLVKIV 718 (720)
Q Consensus 664 ~v~~G~~V~~g~~l~~~eamk-------m~~~i~a~~~G~v~~~~~~~g~~v~~g~-~l~~i~ 718 (720)
+|++||+|++||+|+.+.-.+ +...+--.-+.....+....+..|..|+ +|+.+.
T Consensus 99 ~V~~Gd~V~~G~~L~~~d~~~i~~~g~~~~t~vvvtn~~~~~~~~~~~~~~v~~g~~~i~~~~ 161 (162)
T 1ax3_A 99 FVSEGDRVEPGQKLLEVDLDAVKPNVPSLMTPIVFTNLAEGETVSIKASGSVNREQEDIVKIE 161 (162)
T ss_dssp SCCCCSEECSEEEEEEECHHHHGGGSSCCCEEEEESSGGGTCEEEECCCSEECTTCSSSEEEE
T ss_pred EEeCCCEEcCCCEEEEECHHHHHhcCCCCEEEEEEECCcccceEEeccCceEecCCEEEEEEe
Confidence 999999999999999887322 1222222111112223344455677777 556553
No 145
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=94.55 E-value=0.02 Score=49.05 Aligned_cols=34 Identities=21% Similarity=0.398 Sum_probs=31.3
Q ss_pred EEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 686 EYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 686 ~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
+..|+||.+|+|.++++++||.|++|++|++|+.
T Consensus 14 ~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~ 47 (99)
T 2ejm_A 14 QGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIA 47 (99)
T ss_dssp CSSCBCSSSEEEEEECCCTTEEECSSCEEEEEES
T ss_pred ceEEecCCCEEEEEEECCCCCEECCCCEEEEEEc
Confidence 4568999999999999999999999999999974
No 146
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.45 E-value=0.065 Score=48.21 Aligned_cols=34 Identities=18% Similarity=0.289 Sum_probs=29.7
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
++++++|+|.|.++..+++.+.+.|+++++++.+
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999999999999999999999998888544
No 147
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=94.38 E-value=0.058 Score=50.32 Aligned_cols=32 Identities=34% Similarity=0.687 Sum_probs=29.1
Q ss_pred CeeecCCcceeeEE-----------------------------------ecCCCCeeeCCCeEEEEE
Q psy15251 650 SKVVSPMPGMVDKV-----------------------------------LVQPGQAVKTGDPIMVII 681 (720)
Q Consensus 650 ~~v~ap~~g~v~~~-----------------------------------~v~~G~~V~~g~~l~~~e 681 (720)
+.++||+.|+|..+ +|++||+|++||+|+.+.
T Consensus 50 ~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidTV~l~G~gF~~~V~~Gd~V~~G~~L~~~d 116 (161)
T 1f3z_A 50 NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFD 116 (161)
T ss_dssp SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTTTEEECSCTTCEECTTCEEEEEC
T ss_pred CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccchhcCCCccEEEEeCcCEECCCCEEEEEC
Confidence 57889999999877 899999999999999887
No 148
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=94.27 E-value=0.012 Score=48.23 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=30.6
Q ss_pred CCeeecCCcceeeEEecCCCCeeeCCCeEEEEE
Q psy15251 649 PSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVII 681 (720)
Q Consensus 649 ~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~e 681 (720)
...|+||..|+|.++++++||.|..||+|+.|+
T Consensus 45 ~~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~ 77 (80)
T 1pmr_A 45 VLEVPASADGILDAVLEDEGTTVTSRQILGRLR 77 (80)
T ss_dssp CCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCC
T ss_pred EEEEECCCCEEEEEEEcCCcCEECCCCEEEEEe
Confidence 457999999999999999999999999999876
No 149
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.21 E-value=0.034 Score=47.52 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=31.4
Q ss_pred CeeecCCcceeeEEecCCCCee-eCCCeEEEEEee
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAV-KTGDPIMVIIAM 683 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V-~~g~~l~~~eam 683 (720)
..|.||..|+|.++++++|+.| ..||+|+.|+..
T Consensus 51 ~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i~~~ 85 (98)
T 2dnc_A 51 VTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEE 85 (98)
T ss_dssp EEEECSSCEEEEECSSCTTCCCEESSCEEEEEECT
T ss_pred eEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEEecC
Confidence 4699999999999999999999 999999999853
No 150
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=94.15 E-value=0.037 Score=58.37 Aligned_cols=55 Identities=24% Similarity=0.295 Sum_probs=41.1
Q ss_pred ecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 664 LVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 664 ~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
.|+.|+.-..=..-..+++. -+..|.++.+|+|.++++++||.|++|++|++|++
T Consensus 10 ~v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld~ 64 (341)
T 3fpp_A 10 IVRPGDLQQSVLATGKLDAL-RKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDP 64 (341)
T ss_dssp ---CCCCCCEEEEEEEEEES-SEEECCCSSCEEEEEECCCTTCEECTTCEEEEECC
T ss_pred EEEEeceeEEEEEEEEEEee-EEEEEeccCCcEEEEEEeCCCCEECCCCEEEEECh
Confidence 34444433333445566665 46789999999999999999999999999999975
No 151
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=94.11 E-value=0.015 Score=47.78 Aligned_cols=33 Identities=30% Similarity=0.479 Sum_probs=30.6
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEEe
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIA 682 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~ea 682 (720)
..|+||.+|+|.++++++|+.|..|++|+.|+.
T Consensus 45 ~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (81)
T 1gjx_A 45 MDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEA 77 (81)
T ss_dssp EEECCCCSSBBCCCCCCSSCEECSSSCCCEECC
T ss_pred EEEECCCCEEEEEEecCCCCEeCCCCEEEEEEe
Confidence 469999999999999999999999999998864
No 152
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.10 E-value=0.26 Score=43.79 Aligned_cols=99 Identities=14% Similarity=0.015 Sum_probs=66.8
Q ss_pred CCCCEEEEEcCcH----HHHHHHHHHHHcCCcEEEEeeCCCCCC---ccccc-----ccEEEEeCCCCCcccccCHHHHH
Q psy15251 6 CVLDSILIANRGE----IACRIMRTAKKMGIRVVSVYSDIDADA---LHVKM-----ADEAYRLEGKSSLDTYLNQAKIL 73 (720)
Q Consensus 6 ~~~~~iLI~~~G~----~a~~iira~~~~G~~~v~v~s~~d~~~---~~~~~-----aD~~~~i~~~~~~~~~~~~~~i~ 73 (720)
+..++|.|+|.+. .+..+++.+++.||+++.|....+.-. .+.++ .|-++..- .-.....++
T Consensus 2 ~~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~------p~~~v~~~v 75 (122)
T 3ff4_A 2 NAMKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYI------NPQNQLSEY 75 (122)
T ss_dssp CCCCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECS------CHHHHGGGH
T ss_pred CCCCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEe------CHHHHHHHH
Confidence 3468999999754 589999999999999999854332110 01111 34433321 112234456
Q ss_pred HHHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCC
Q psy15251 74 DIAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPS 112 (720)
Q Consensus 74 ~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~ 112 (720)
+.|.+.++.+|+-..|+. +..+.+.+++.|+.++|+.
T Consensus 76 ~e~~~~g~k~v~~~~G~~--~~e~~~~a~~~Girvv~nC 112 (122)
T 3ff4_A 76 NYILSLKPKRVIFNPGTE--NEELEEILSENGIEPVIGC 112 (122)
T ss_dssp HHHHHHCCSEEEECTTCC--CHHHHHHHHHTTCEEEESC
T ss_pred HHHHhcCCCEEEECCCCC--hHHHHHHHHHcCCeEECCc
Confidence 667778889999888874 5789999999999999743
No 153
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.06 E-value=0.37 Score=46.85 Aligned_cols=92 Identities=11% Similarity=0.126 Sum_probs=57.3
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHH-HcCCcEEEEeeCCC-CCCccc-cccc-EEEEeCCCCCcccccCHHHHHHHHHHcC
Q psy15251 6 CVLDSILIAN-RGEIACRIMRTAK-KMGIRVVSVYSDID-ADALHV-KMAD-EAYRLEGKSSLDTYLNQAKILDIAVRSQ 80 (720)
Q Consensus 6 ~~~~~iLI~~-~G~~a~~iira~~-~~G~~~v~v~s~~d-~~~~~~-~~aD-~~~~i~~~~~~~~~~~~~~i~~~a~~~~ 80 (720)
+|||++||.| .|.++..+++.+. +.|++++++..+++ ...... .... ..+. .+..|.+.+.++++ +
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------~D~~d~~~~~~~~~--~ 73 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIE-------GSFQNPGXLEQAVT--N 73 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEE-------CCTTCHHHHHHHHT--T
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEE-------CCCCCHHHHHHHHc--C
Confidence 3578899999 5899999999999 89999988865433 211100 0111 1222 25567777777774 6
Q ss_pred CCEEEeCCCCCc-ccHHHHHHHHHCCC
Q psy15251 81 CQAIHPGYGFLS-ENAEFANAVEGNRL 106 (720)
Q Consensus 81 ~daI~pg~g~ls-E~~~~a~~~~~~gl 106 (720)
+|+++-..|... +...+...+.+.|.
T Consensus 74 ~d~vv~~ag~~n~~~~~~~~~~~~~~~ 100 (221)
T 3r6d_A 74 AEVVFVGAMESGSDMASIVKALSRXNI 100 (221)
T ss_dssp CSEEEESCCCCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCCCChhHHHHHHHHHhcCC
Confidence 898886655310 12344556666664
No 154
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=93.97 E-value=0.042 Score=47.84 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=31.4
Q ss_pred CeeecCCcceeeEEecCCCC-eeeCCCeEEEEEee
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQ-AVKTGDPIMVIIAM 683 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~-~V~~g~~l~~~eam 683 (720)
..|.||..|+|.+++|++|+ .|..||+|++|+..
T Consensus 51 ~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~i~~~ 85 (108)
T 2dne_A 51 VGFESLEECYMAKILVAEGTRDVPIGAIICITVGK 85 (108)
T ss_dssp EEEECSSSEEEEECSSCTTCCSEETTCEEEEEESC
T ss_pred eEEeCCCCEEEEEEEeCCCCeeecCCCEEEEEecC
Confidence 46999999999999999999 89999999999853
No 155
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=93.87 E-value=0.05 Score=48.83 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=31.4
Q ss_pred CeeecCCcceeeEEecCCCC-eeeCCCeEEEEEee
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQ-AVKTGDPIMVIIAM 683 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~-~V~~g~~l~~~eam 683 (720)
..|.||..|+|.+++|++|| .|..||+|++|+.-
T Consensus 71 ~~I~Ap~~G~V~~i~v~~Gd~~V~~G~~L~~i~~~ 105 (128)
T 1y8o_B 71 IGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEK 105 (128)
T ss_dssp EEEECCSCEEEEEESSCTTCCSEETTCEEEEEESS
T ss_pred eEEeCCCCeEEEEEEeCCCCeeecCCCEEEEEecC
Confidence 46999999999999999998 89999999999863
No 156
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=93.70 E-value=0.054 Score=51.72 Aligned_cols=47 Identities=26% Similarity=0.357 Sum_probs=37.4
Q ss_pred EecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEE-----------------------------cCCCCcccCCCe
Q psy15251 663 VLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIF-----------------------------YAAGQSIQKNQN 713 (720)
Q Consensus 663 ~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~-----------------------------~~~g~~v~~g~~ 713 (720)
++|++|+.|++||.|+.-. +|.|..+|+|.+.. ++.|+.|.+|++
T Consensus 23 L~V~dG~~VkkG~~laeWD------PIitE~~G~V~d~k~lP~I~I~d~~G~~~~~Y~LPvgA~l~~~V~dG~~V~~Gdv 96 (193)
T 2xha_A 23 LHVNNGKDVNKGDLIAEEP------PIYARRSGVIVDVKNVRKIVVETIDRKYTKTYYIPESAGIEPGLRVGTKVKQGLP 96 (193)
T ss_dssp ESCCTTCEECTTCEEEEEC------CEECSSCEEEEEEEEEEEEEEECTTSSCEEEEEEEGGGCCCTTCCTTCEECTTSB
T ss_pred EEECCCCEEcCCCEEEEeC------cEEEccCEEEEeeccCcEEEEEcCCCCEeEEEEcCCCCEEEEEcCCCCEEcCCCE
Confidence 6899999999999999766 78888888876543 666777777777
Q ss_pred EE
Q psy15251 714 LV 715 (720)
Q Consensus 714 l~ 715 (720)
|+
T Consensus 97 LA 98 (193)
T 2xha_A 97 LS 98 (193)
T ss_dssp SS
T ss_pred Ee
Confidence 64
No 157
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=93.42 E-value=0.59 Score=42.74 Aligned_cols=101 Identities=15% Similarity=0.108 Sum_probs=65.2
Q ss_pred CCEEEEEcC----cHHHHHHHHHHHHcCCcEEEEeeCC--CCC---Ccc------cccccEEEEeCCCCCcccccCHHHH
Q psy15251 8 LDSILIANR----GEIACRIMRTAKKMGIRVVSVYSDI--DAD---ALH------VKMADEAYRLEGKSSLDTYLNQAKI 72 (720)
Q Consensus 8 ~~~iLI~~~----G~~a~~iira~~~~G~~~v~v~s~~--d~~---~~~------~~~aD~~~~i~~~~~~~~~~~~~~i 72 (720)
.++|.|+|. |..+..+++.+.+.|++++.+.... ... ..+ ..-+|-.+..-| ......+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp------~~~v~~v 86 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN------SEAAWGV 86 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC------STHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC------HHHHHHH
Confidence 568999998 6689999999999999977775443 100 000 112343332211 1334555
Q ss_pred HHHHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHH
Q psy15251 73 LDIAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAI 116 (720)
Q Consensus 73 ~~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i 116 (720)
++-+.+.++.+|+...+.. ...+.+.+++.|+.++||.---+
T Consensus 87 ~~~~~~~g~~~i~i~~~~~--~~~l~~~a~~~Gi~~igpnc~g~ 128 (145)
T 2duw_A 87 AQEAIAIGAKTLWLQLGVI--NEQAAVLAREAGLSVVMDRCPAI 128 (145)
T ss_dssp HHHHHHHTCCEEECCTTCC--CHHHHHHHHTTTCEEECSCCHHH
T ss_pred HHHHHHcCCCEEEEcCChH--HHHHHHHHHHcCCEEEcCCeeeE
Confidence 5555567888887655433 57888899999999999774443
No 158
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=93.40 E-value=0.079 Score=48.79 Aligned_cols=52 Identities=17% Similarity=0.139 Sum_probs=46.3
Q ss_pred eeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEE-EEEcCCCeEEEEEEc
Q psy15251 651 KVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEY-VITSGTSGIIEEIFY 702 (720)
Q Consensus 651 ~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~-~i~a~~~G~v~~~~~ 702 (720)
-..=|..|..+-+.+.+|++|.+|+.|+-|.+-|-|. -++||++|+|.-+.=
T Consensus 102 L~lvpaeG~~V~~i~~~G~rV~kgd~lA~i~T~KGEVR~i~spv~G~Vv~v~e 154 (169)
T 3d4r_A 102 LISVPAEGYKVYPIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVIFMNE 154 (169)
T ss_dssp CEEEEECSSEEEECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEEEEEE
T ss_pred EEEEEeCceEEEEEcCcCcEeccCCeEEEEEecCceEEEecCCCcEEEEEEEe
Confidence 4556889999999999999999999999999999985 599999999987653
No 159
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=93.32 E-value=0.09 Score=60.89 Aligned_cols=117 Identities=14% Similarity=0.112 Sum_probs=26.8
Q ss_pred EEEEEECCEEEEEEEEEeCcEEEEEEeCCCeeEEEEeeccccc--ccCCceeEEEeeecCeEEEEEEEECCeEEEEEcCc
Q psy15251 549 TVQIQHLNKEYNVQVTLSAHTYRVSIRGDPSSELCIKNASLTQ--VSKYGYELVAEGEKGRIRSSVVCLDGSVSVFTKTG 626 (720)
Q Consensus 549 ~~~~~~~~~~~~v~v~~~~~~~~v~i~~~~~~~v~~~~~~~~~--~~~~~~~l~~~~i~g~~~~~~~~~~~~~~~~~~~g 626 (720)
.+.+.++|..+.+.+....+.+.|.. +|..+.+......... ..+....+... +.|......+..++++.- |
T Consensus 554 ~~~~~~~G~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~v~ap-~~G~v~~~~v~~Gd~V~~----g 627 (675)
T 3u9t_A 554 DLVSRVDGVTRRSAALRRGRQLFLEW-EGELLAIEAVDPIAEAEAAHAHQGGLSAP-MNGSIVRVLVEPGQTVEA----G 627 (675)
T ss_dssp EEEEEETTEEEEEEEEEETTEEEEEC-SSSEEEEEECCHHHHHC------------------------------------
T ss_pred eEEEEECCEEEEEEEEEeCCEEEEEE-CCeEEEEEEcCcccccccccCCCCeEECC-CCEEEEEEEeCCCCEEcC----C
Confidence 36677788888887776566788887 7877777642100000 00111123333 444411111222222211 1
Q ss_pred eEEEEecCCCCCCCCCCCCCCCCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEe
Q psy15251 627 SYQFNLPGKSYSLEPEDSALSDPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIA 682 (720)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~ea 682 (720)
+.-.... +..-...|+||..|+|.+++|++||.|+.||+|++||.
T Consensus 628 ~~l~~iE-----------amK~~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~~ 672 (675)
T 3u9t_A 628 ATLVVLE-----------AMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELDE 672 (675)
T ss_dssp --------------------------------------------------------
T ss_pred CEEEEEE-----------ecceeEEEECCCCeEEEEEEeCCcCCcCCCCEEEEEec
Confidence 0000000 00123469999999999999999999999999999985
No 160
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=93.29 E-value=0.47 Score=42.65 Aligned_cols=97 Identities=7% Similarity=0.047 Sum_probs=63.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
..++++|+|.|..+..+++.+++. ||+++.+..+... .........-+. ..+.+.+++++.++|.|+
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~-~~g~~i~g~pV~-----------g~~~l~~~~~~~~id~vi 70 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRK-KHKTTMQGITIY-----------RPKYLERLIKKHCISTVL 70 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGG-GTTCEETTEEEE-----------CGGGHHHHHHHHTCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcc-cCCCEecCeEEE-----------CHHHHHHHHHHCCCCEEE
Confidence 457999999999999999999876 8998888654321 111112222221 134577888899999888
Q ss_pred eCCCCCcc--cHHHHHHHHHCCCeE-eCCCHHH
Q psy15251 86 PGYGFLSE--NAEFANAVEGNRLIF-VGPSSEA 115 (720)
Q Consensus 86 pg~g~lsE--~~~~a~~~~~~gl~~-~Gp~~~~ 115 (720)
...+.... ...+...|...|+.+ +-|+...
T Consensus 71 ia~~~~~~~~~~~i~~~l~~~gv~v~~vP~~~~ 103 (141)
T 3nkl_A 71 LAVPSASQVQKKVIIESLAKLHVEVLTIPNLDD 103 (141)
T ss_dssp ECCTTSCHHHHHHHHHHHHTTTCEEEECCCHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCeEEECCCHHH
Confidence 66543321 235677888889886 3355443
No 161
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.14 E-value=0.99 Score=42.80 Aligned_cols=72 Identities=15% Similarity=0.093 Sum_probs=47.0
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 9 DSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 9 ~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
++|||.|+ |.++..+++.+.+.|++++++..+++........--+.+. .+..+.+.+.++.+ ++|+|+-.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-------~D~~~~~~~~~~~~--~~d~vi~~ 74 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVV-------GDVLQAADVDKTVA--GQDAVIVL 74 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEE-------SCTTSHHHHHHHHT--TCSEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEE-------ecCCCHHHHHHHHc--CCCEEEEC
Confidence 58999996 9999999999999999998886543322110000011222 25567777777664 57888765
Q ss_pred CC
Q psy15251 88 YG 89 (720)
Q Consensus 88 ~g 89 (720)
.+
T Consensus 75 a~ 76 (206)
T 1hdo_A 75 LG 76 (206)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 162
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.67 E-value=0.13 Score=46.68 Aligned_cols=78 Identities=9% Similarity=-0.022 Sum_probs=49.3
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 5 SCVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 5 ~~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
..+.++++|+|.|.++..+++.+++.|+++++++.+++....... .+..+..+ +..+.+.+ +.+.-.++|++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~g------d~~~~~~l-~~a~i~~ad~v 75 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLG------NAANEEIM-QLAHLECAKWL 75 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEES------CTTSHHHH-HHTTGGGCSEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEEC------CCCCHHHH-HhcCcccCCEE
Confidence 456679999999999999999999999999999665442211111 12222222 23344333 33334568888
Q ss_pred EeCCCC
Q psy15251 85 HPGYGF 90 (720)
Q Consensus 85 ~pg~g~ 90 (720)
+...+.
T Consensus 76 i~~~~~ 81 (140)
T 3fwz_A 76 ILTIPN 81 (140)
T ss_dssp EECCSC
T ss_pred EEECCC
Confidence 866553
No 163
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=92.62 E-value=0.98 Score=41.13 Aligned_cols=101 Identities=13% Similarity=0.081 Sum_probs=66.1
Q ss_pred CCEEEEEcC----cHHHHHHHHHHHHcCCcEEEEeeCCCCC---Ccccc------cccEEEEeCCCCCcccccCHHHHHH
Q psy15251 8 LDSILIANR----GEIACRIMRTAKKMGIRVVSVYSDIDAD---ALHVK------MADEAYRLEGKSSLDTYLNQAKILD 74 (720)
Q Consensus 8 ~~~iLI~~~----G~~a~~iira~~~~G~~~v~v~s~~d~~---~~~~~------~aD~~~~i~~~~~~~~~~~~~~i~~ 74 (720)
.++|.|+|. |..+.++++.+++.|++++.+.+....- ..+.. -.|-.+..- .......+++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~v------p~~~~~~vv~ 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFV------KPKLTMEYVE 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECS------CHHHHHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEe------CHHHHHHHHH
Confidence 578999998 5679999999999999977774432110 00001 124333321 1123445666
Q ss_pred HHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHH
Q psy15251 75 IAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAI 116 (720)
Q Consensus 75 ~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i 116 (720)
.|.+.++.+++-..|+. ...+.+.+++.|++++||.---+
T Consensus 96 ~~~~~gi~~i~~~~g~~--~~~l~~~a~~~Gi~vvGpnc~gv 135 (144)
T 2d59_A 96 QAIKKGAKVVWFQYNTY--NREASKKADEAGLIIVANRCMMR 135 (144)
T ss_dssp HHHHHTCSEEEECTTCC--CHHHHHHHHHTTCEEEESCCHHH
T ss_pred HHHHcCCCEEEECCCch--HHHHHHHHHHcCCEEEcCCchhh
Confidence 66778888888666653 57888999999999999764433
No 164
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=92.39 E-value=0.9 Score=41.11 Aligned_cols=102 Identities=14% Similarity=0.066 Sum_probs=65.3
Q ss_pred CCCEEEEEcC----cHHHHHHHHHHHHcCCcEEEEeeCCCCC--C-cc------cccccEEEEeCCCCCcccccCHHHHH
Q psy15251 7 VLDSILIANR----GEIACRIMRTAKKMGIRVVSVYSDIDAD--A-LH------VKMADEAYRLEGKSSLDTYLNQAKIL 73 (720)
Q Consensus 7 ~~~~iLI~~~----G~~a~~iira~~~~G~~~v~v~s~~d~~--~-~~------~~~aD~~~~i~~~~~~~~~~~~~~i~ 73 (720)
..++|.|+|. |..+..+++.+++.|++++.+....... . .+ ..-+|-.+..- .......++
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~v------p~~~v~~v~ 86 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVV------PPKVGLQVA 86 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECS------CHHHHHHHH
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEe------CHHHHHHHH
Confidence 3578999998 8899999999999999977774432210 0 00 01134443321 112344455
Q ss_pred HHHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHH
Q psy15251 74 DIAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAI 116 (720)
Q Consensus 74 ~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i 116 (720)
+-+.+.++.+++.-.+. +...+.+.+++.|+.++||.---+
T Consensus 87 ~~~~~~g~~~i~~~~~~--~~~~l~~~a~~~Gi~~igpnc~g~ 127 (138)
T 1y81_A 87 KEAVEAGFKKLWFQPGA--ESEEIRRFLEKAGVEYSFGRCIMV 127 (138)
T ss_dssp HHHHHTTCCEEEECTTS--CCHHHHHHHHHHTCEEECSCCHHH
T ss_pred HHHHHcCCCEEEEcCcc--HHHHHHHHHHHCCCEEEcCCcceE
Confidence 55556788888765543 357888889999999999764443
No 165
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=92.28 E-value=0.065 Score=47.11 Aligned_cols=34 Identities=18% Similarity=0.449 Sum_probs=31.2
Q ss_pred CeeecCCcceeeEEecCCCCeeeCC-CeEEEEEee
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTG-DPIMVIIAM 683 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g-~~l~~~eam 683 (720)
..|+||+.|+|.++.+++|+.|..| ++|+.|..+
T Consensus 68 ~~i~AP~~G~V~~~~~~~G~~v~~g~~~l~~i~~~ 102 (116)
T 2k32_A 68 TEIKAPFDGTIGDALVNIGDYVSASTTELVRVTNL 102 (116)
T ss_dssp EEEECSSSEEECCCSCCTTCEECTTTSCCEEEECS
T ss_pred CEEEcCCCEEEEEEECCCCCEEcCCCcEEEEEECC
Confidence 4799999999999999999999999 999998754
No 166
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=92.13 E-value=0.068 Score=56.78 Aligned_cols=60 Identities=12% Similarity=0.014 Sum_probs=46.7
Q ss_pred eeEEecCCCCeeeCCCeEEEEEee-eeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 660 VDKVLVQPGQAVKTGDPIMVIIAM-KMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 660 v~~~~v~~G~~V~~g~~l~~~eam-km~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
|.-..|+.|+....=..-..+++. .-+..|.++.+|+|.++++++||.|++|++|++|++
T Consensus 30 v~~~~v~~~~~~~~~~~~G~v~~~p~~~~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~ 90 (359)
T 3lnn_A 30 LAVAPATRETVAAPFNLPAMIEADPAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDS 90 (359)
T ss_dssp CCEEECEEEEECCEEEEEEEEECCSSSEEEECCSSCEEEEECCSCTTCEECTTCEEEEEEC
T ss_pred eEEEEeeecccceeEEEEEEEEECCCcEEEEeccCCEEEEEEEcCCCCEEcCCCEEEEECh
Confidence 333445555544444556677775 567899999999999999999999999999999975
No 167
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=92.10 E-value=0.28 Score=48.46 Aligned_cols=75 Identities=12% Similarity=0.081 Sum_probs=48.3
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcC-CcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCE
Q psy15251 6 CVLDSILIAN-RGEIACRIMRTAKKMG-IRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQA 83 (720)
Q Consensus 6 ~~~~~iLI~~-~G~~a~~iira~~~~G-~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~da 83 (720)
+||++|||.| .|.++..+++.+.+.| ++++++..+++........--+.+. .+..|.+.+.++.+ ++|+
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~-------~Dl~d~~~~~~~~~--~~D~ 91 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIM-------GDVLNHAALKQAMQ--GQDI 91 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEE-------CCTTCHHHHHHHHT--TCSE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEE-------ecCCCHHHHHHHhc--CCCE
Confidence 3578999999 5899999999999999 8888876543322111110111222 25567777777765 5788
Q ss_pred EEeCCC
Q psy15251 84 IHPGYG 89 (720)
Q Consensus 84 I~pg~g 89 (720)
|+-..+
T Consensus 92 vv~~a~ 97 (236)
T 3qvo_A 92 VYANLT 97 (236)
T ss_dssp EEEECC
T ss_pred EEEcCC
Confidence 874433
No 168
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=91.60 E-value=1.5 Score=45.65 Aligned_cols=77 Identities=12% Similarity=0.072 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcC--CcEEEEeeCCCCCCc-cc-cc---ccEEEEeCCCCCcccccCHHHHHHHHHH
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMG--IRVVSVYSDIDADAL-HV-KM---ADEAYRLEGKSSLDTYLNQAKILDIAVR 78 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G--~~~v~v~s~~d~~~~-~~-~~---aD~~~~i~~~~~~~~~~~~~~i~~~a~~ 78 (720)
++++|||.|+ |.++..+++.+.+.| ++++++......... .. .+ ..-.+.. .+..|.+.+.++++.
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~------~Dl~d~~~~~~~~~~ 96 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVK------GEIQNGELLEHVIKE 96 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEE------CCTTCHHHHHHHHHH
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEE------cCCCCHHHHHHHHhh
Confidence 3568999996 899999999999999 666666433211111 00 00 1112221 266788889899988
Q ss_pred cCCCEEEeCCC
Q psy15251 79 SQCQAIHPGYG 89 (720)
Q Consensus 79 ~~~daI~pg~g 89 (720)
.++|+|+-..+
T Consensus 97 ~~~d~Vih~A~ 107 (346)
T 4egb_A 97 RDVQVIVNFAA 107 (346)
T ss_dssp HTCCEEEECCC
T ss_pred cCCCEEEECCc
Confidence 88998885544
No 169
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=91.60 E-value=0.56 Score=49.51 Aligned_cols=77 Identities=17% Similarity=0.116 Sum_probs=49.0
Q ss_pred cCCCCEEEEEc-CcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCccccc-CHHHHHHHHHHcCC
Q psy15251 5 SCVLDSILIAN-RGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYL-NQAKILDIAVRSQC 81 (720)
Q Consensus 5 ~~~~~~iLI~~-~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~-~~~~i~~~a~~~~~ 81 (720)
..+|++|||.| .|-++..+++.+.+. |++|+++...............-.+.. .+.. +.+.+.++++ ++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~------~Dl~~d~~~~~~~~~--~~ 92 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFE------GDITINKEWVEYHVK--KC 92 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEE------CCTTTCHHHHHHHHH--HC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEe------CccCCCHHHHHHHhc--cC
Confidence 34567999999 599999999999998 999998865443322211111222222 1455 6777777766 58
Q ss_pred CEEEeCCC
Q psy15251 82 QAIHPGYG 89 (720)
Q Consensus 82 daI~pg~g 89 (720)
|+|+-.-+
T Consensus 93 d~Vih~A~ 100 (372)
T 3slg_A 93 DVILPLVA 100 (372)
T ss_dssp SEEEECBC
T ss_pred CEEEEcCc
Confidence 88874433
No 170
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=91.55 E-value=0.79 Score=46.81 Aligned_cols=91 Identities=11% Similarity=0.180 Sum_probs=57.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCC-Ccc-c----c--ccc-EEEEeCCCCCcccccCHHHHHHHHH
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDAD-ALH-V----K--MAD-EAYRLEGKSSLDTYLNQAKILDIAV 77 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~-~~~-~----~--~aD-~~~~i~~~~~~~~~~~~~~i~~~a~ 77 (720)
|++|||.|+ |.++..+++.+.+.|++++++..+.... ... . . ... +.+. .++.|.+.+.++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d~~~l~~~~~ 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH-------GSIDDHASLVEAVK 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEEC-------CCTTCHHHHHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEE-------eccCCHHHHHHHHc
Confidence 468999996 9999999999999999988875433221 000 0 0 011 1221 26677788877775
Q ss_pred HcCCCEEEeCCCCC--cccHHHHHHHHHCC-Ce
Q psy15251 78 RSQCQAIHPGYGFL--SENAEFANAVEGNR-LI 107 (720)
Q Consensus 78 ~~~~daI~pg~g~l--sE~~~~a~~~~~~g-l~ 107 (720)
++|+|+-..+.. .....+.+++.+.| +.
T Consensus 77 --~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 77 --NVDVVISTVGSLQIESQVNIIKAIKEVGTVK 107 (308)
T ss_dssp --TCSEEEECCCGGGSGGGHHHHHHHHHHCCCS
T ss_pred --CCCEEEECCcchhhhhHHHHHHHHHhcCCCc
Confidence 588888665532 12345667777776 53
No 171
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=91.30 E-value=0.11 Score=55.54 Aligned_cols=56 Identities=18% Similarity=0.214 Sum_probs=39.5
Q ss_pred EecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 663 VLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 663 ~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
..|+.++....=..-..|++. -+..|.++.+|+|.++++++||.|++|++|++|++
T Consensus 21 ~~v~~~~~~~~~~~~G~v~~~-~~~~v~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld~ 76 (369)
T 1vf7_A 21 VTLEAQTVTLNTELPGRTNAF-RIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDP 76 (369)
T ss_dssp --------CCEEEEEEECEES-CEEEECCSSCEEEEECCSCSSEEECTTSEEEEECC
T ss_pred EEEEeeccceEEEEEEEEEee-eEEEEEeeCceEEEEEEcCCCCEEcCCCEEEEECc
Confidence 344555544444455666764 46789999999999999999999999999999974
No 172
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=91.16 E-value=0.8 Score=41.57 Aligned_cols=101 Identities=14% Similarity=0.069 Sum_probs=65.3
Q ss_pred CCEEEEEcC----cHHHHHHHHHHHHcCCcEEEEeeC--CCCC---Ccccc------cccEEEEeCCCCCcccccCHHHH
Q psy15251 8 LDSILIANR----GEIACRIMRTAKKMGIRVVSVYSD--IDAD---ALHVK------MADEAYRLEGKSSLDTYLNQAKI 72 (720)
Q Consensus 8 ~~~iLI~~~----G~~a~~iira~~~~G~~~v~v~s~--~d~~---~~~~~------~aD~~~~i~~~~~~~~~~~~~~i 72 (720)
.++|.|+|. |..+..+++.+++.||+++.+... .+.- ..+.+ -.|-++..-| ......+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp------~~~~~~v 86 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRP------PSALMDH 86 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSC------HHHHTTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeC------HHHHHHH
Confidence 578999998 577999999999999997777544 2110 00111 1343333211 1122334
Q ss_pred HHHHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHH
Q psy15251 73 LDIAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAI 116 (720)
Q Consensus 73 ~~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i 116 (720)
++.+.+.++.+++...|+. +..+.+.+++.|+.++||.---+
T Consensus 87 ~~~~~~~gi~~i~~~~g~~--~~~~~~~a~~~Gir~vgpnc~g~ 128 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSGIR--HPEFEKALKEAGIPVVADRCLMV 128 (140)
T ss_dssp HHHHHHHCCSCEEECTTCC--CHHHHHHHHHTTCCEEESCCHHH
T ss_pred HHHHHHcCCCEEEEcCCcC--HHHHHHHHHHcCCEEEcCCccce
Confidence 5556667888888766664 47888999999999999764433
No 173
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.02 E-value=0.95 Score=41.44 Aligned_cols=36 Identities=25% Similarity=0.183 Sum_probs=31.0
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCC
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDID 42 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d 42 (720)
..++|+|+|.|.++..+++.+++.|++++++..++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 356899999999999999999999999888865443
No 174
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=91.00 E-value=1.2 Score=45.53 Aligned_cols=92 Identities=13% Similarity=0.168 Sum_probs=57.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-c----cc--ccEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALH-V----KM--ADEAYRLEGKSSLDTYLNQAKILDIAVRS 79 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-~----~~--aD~~~~i~~~~~~~~~~~~~~i~~~a~~~ 79 (720)
+++|||.|+ |.++..+++.+.+.|++++++..+....... . .+ ..-.+.. .++.|.+.+.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~------~D~~d~~~l~~~~~-- 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE------ASLDDHQRLVDALK-- 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEEC------CCSSCHHHHHHHHT--
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEe------CCCCCHHHHHHHHh--
Confidence 458999995 8999999999999999998885443221010 0 00 1111111 26677787777765
Q ss_pred CCCEEEeCCCCCc------ccHHHHHHHHHCC-Ce
Q psy15251 80 QCQAIHPGYGFLS------ENAEFANAVEGNR-LI 107 (720)
Q Consensus 80 ~~daI~pg~g~ls------E~~~~a~~~~~~g-l~ 107 (720)
++|+|+-..+... ....+.+++.+.| +.
T Consensus 76 ~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 76 QVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIK 110 (313)
T ss_dssp TCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCS
T ss_pred CCCEEEECCccccchhhHHHHHHHHHHHHhcCCCc
Confidence 6888876554321 1234667777787 53
No 175
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=91.00 E-value=0.043 Score=52.40 Aligned_cols=46 Identities=22% Similarity=0.246 Sum_probs=38.3
Q ss_pred ecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEE--------------------------E--EcCCCCcccCCCeEE
Q psy15251 664 LVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEE--------------------------I--FYAAGQSIQKNQNLV 715 (720)
Q Consensus 664 ~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~--------------------------~--~~~~g~~v~~g~~l~ 715 (720)
.|++|+.|++||+|+ -+..|-|..+|+|.- + +|++||.|.+|++|+
T Consensus 84 ~V~dG~~V~~GdvLA------Kd~AIiaEIdG~V~fgkgkrrivI~~~~Ge~~eylIPk~k~i~~~V~eGd~V~~Ge~L~ 157 (193)
T 2xha_A 84 GLRVGTKVKQGLPLS------KNEEYICELDGKIVEIERMKKVVVQTPDGEQDVYYIPLDVFDRDRIKKGKEVKQGEMLA 157 (193)
T ss_dssp TCCTTCEECTTSBSS------TTSCSBCCSSEEEEEEEEEEEEEEECTTSCEEEEEEEGGGCCTTTSCTTCEECTTCEEE
T ss_pred EcCCCCEEcCCCEEe------cCCeEEEccceEEEECCCeEEEEEECCCCCEEEEEeCCCCccccccCCCCEECCCCCcc
Confidence 489999999999998 466777888887752 3 789999999999987
No 176
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=90.67 E-value=0.28 Score=53.24 Aligned_cols=56 Identities=14% Similarity=0.208 Sum_probs=43.1
Q ss_pred ecCCCCeeeCCCeEEEEEee-eeEEEEEcCCCeEEEEEEc-CCCCcccCCCeEEEEec
Q psy15251 664 LVQPGQAVKTGDPIMVIIAM-KMEYVITSGTSGIIEEIFY-AAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 664 ~v~~G~~V~~g~~l~~~eam-km~~~i~a~~~G~v~~~~~-~~g~~v~~g~~l~~i~~ 719 (720)
.|+.|+.-..=.....|++. .-+..|.++.+|+|.++.+ ++||.|++|++|++|+.
T Consensus 98 ~v~~~~~~~~v~~~G~V~~~~~~~~~v~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld~ 155 (413)
T 3ne5_B 98 TVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTI 155 (413)
T ss_dssp ECEEECCEEEEEEEEEEEEEEEEEEEECCSSCEEEEEECSCCTTCEECTTCEEEEEEC
T ss_pred EEEEeecceEEEEEEEEEECCCceEEEecccCEEEEEEEeCCCCCEEcCCCEEEEEcC
Confidence 34444444444455666653 4578899999999999998 99999999999999974
No 177
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.66 E-value=0.78 Score=44.54 Aligned_cols=72 Identities=10% Similarity=0.198 Sum_probs=48.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
|++|||.| .|.++..+++.+.+.|++++++...+..... +.+..-.+. .+..|.+.+.++.+ ++|+|+-
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~-----~Dl~d~~~~~~~~~--~~d~vi~ 73 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI---ENEHLKVKK-----ADVSSLDEVCEVCK--GADAVIS 73 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC---CCTTEEEEC-----CCTTCHHHHHHHHT--TCSEEEE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh---ccCceEEEE-----ecCCCHHHHHHHhc--CCCEEEE
Confidence 56999999 4899999999999999999888544332211 111111121 25667788877775 5888875
Q ss_pred CCC
Q psy15251 87 GYG 89 (720)
Q Consensus 87 g~g 89 (720)
..+
T Consensus 74 ~a~ 76 (227)
T 3dhn_A 74 AFN 76 (227)
T ss_dssp CCC
T ss_pred eCc
Confidence 544
No 178
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=90.60 E-value=0.8 Score=48.56 Aligned_cols=101 Identities=14% Similarity=0.003 Sum_probs=54.4
Q ss_pred CCCEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEeeCCCCCCccccccc-EEEEeCCCC-----CcccccC-------
Q psy15251 7 VLDSILIANRGEI-----ACRIMRTAKKMGIRVVSVYSDIDADALHVKMAD-EAYRLEGKS-----SLDTYLN------- 68 (720)
Q Consensus 7 ~~~~iLI~~~G~~-----a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD-~~~~i~~~~-----~~~~~~~------- 68 (720)
|.+||||+++|.- ++.+++++++.|+++..+.+........+..+. ....++... .......
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKS 80 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHH
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHH
Confidence 5679999998753 788999999999999887643211011111111 122232110 0011111
Q ss_pred HHHHHHHHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 69 QAKILDIAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 69 ~~~i~~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
......+.++.++|.|+...++.+ ....-++...|+|++
T Consensus 81 ~~~~~~~l~~~~PDvVi~~g~~~s--~p~~laA~~~~iP~v 119 (365)
T 3s2u_A 81 LFQALRVIRQLRPVCVLGLGGYVT--GPGGLAARLNGVPLV 119 (365)
T ss_dssp HHHHHHHHHHHCCSEEEECSSSTH--HHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhcCCCEEEEcCCcch--HHHHHHHHHcCCCEE
Confidence 123455778899999986666544 222334556777765
No 179
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=90.47 E-value=0.4 Score=45.27 Aligned_cols=28 Identities=25% Similarity=0.345 Sum_probs=23.5
Q ss_pred CCcceeeEEecCCCCeeeCCCeEEEEEe
Q psy15251 655 PMPGMVDKVLVQPGQAVKTGDPIMVIIA 682 (720)
Q Consensus 655 p~~g~v~~~~v~~G~~V~~g~~l~~~ea 682 (720)
-+.|+=-+++|++||+|++||+|+.+.-
T Consensus 112 ~L~G~gF~~~V~~Gd~Vk~Gd~L~~fD~ 139 (183)
T 3our_B 112 ELKGEGFTRIAEEGQTVKAGDTVIEFDL 139 (183)
T ss_dssp GGTTTTEEECSCTTCEECTTCEEEEECH
T ss_pred ccCCccceEEEeCcCEEcCCCEEEEECH
Confidence 4556666889999999999999999873
No 180
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=90.40 E-value=0.6 Score=47.23 Aligned_cols=62 Identities=8% Similarity=0.150 Sum_probs=47.3
Q ss_pred CCC-EEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 7 VLD-SILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 7 ~~~-~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.|+ +|||.|+ |.++..+++.+.+.|++++++... ..+..|.+.+.++.+..++|+|
T Consensus 3 ~M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~~~d~v 60 (287)
T 3sc6_A 3 AMKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEIRPHII 60 (287)
T ss_dssp --CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHHCCSEE
T ss_pred cceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhcCCCEE
Confidence 355 9999995 899999999999999998888430 1245677888888888899998
Q ss_pred EeCCCC
Q psy15251 85 HPGYGF 90 (720)
Q Consensus 85 ~pg~g~ 90 (720)
+-..+.
T Consensus 61 i~~a~~ 66 (287)
T 3sc6_A 61 IHCAAY 66 (287)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 865543
No 181
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=90.37 E-value=0.22 Score=52.53 Aligned_cols=48 Identities=27% Similarity=0.372 Sum_probs=38.5
Q ss_pred EEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEE-----------------------------cCCCCcccCCC
Q psy15251 662 KVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIF-----------------------------YAAGQSIQKNQ 712 (720)
Q Consensus 662 ~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~-----------------------------~~~g~~v~~g~ 712 (720)
.++|++|+.|++||.|+.=. +|.|..+|+|.+.. ++.|+.|.+|+
T Consensus 62 ~l~v~~g~~V~~g~~la~wd------pii~e~~G~v~~~~~~~~p~i~i~d~~g~~~y~lp~ga~l~~~v~~g~~v~~G~ 135 (352)
T 2xhc_A 62 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVDVKNVRKIVVETIDRKYTKTYYIPESAGIEPGLRVGTKVKQGL 135 (352)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEEEEEEEEEEEECTTCSSEEEEEEEGGGCBCTTCCTTCEECTTC
T ss_pred EEEecCCCEEcCCCEEEEec------cEEEecceEEEeeccCCceEEEEEcCCCCEEEEcCCCcEEEEecCCCCEEccCc
Confidence 36899999999999999876 77788888775433 66788888888
Q ss_pred eEE
Q psy15251 713 NLV 715 (720)
Q Consensus 713 ~l~ 715 (720)
+|+
T Consensus 136 vla 138 (352)
T 2xhc_A 136 PLS 138 (352)
T ss_dssp BSB
T ss_pred EEe
Confidence 775
No 182
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=90.21 E-value=1 Score=45.90 Aligned_cols=91 Identities=14% Similarity=0.141 Sum_probs=56.9
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCC-CCCCc-c-c----cc--cc-EEEEeCCCCCcccccCHHHHHHHH
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDI-DADAL-H-V----KM--AD-EAYRLEGKSSLDTYLNQAKILDIA 76 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~-d~~~~-~-~----~~--aD-~~~~i~~~~~~~~~~~~~~i~~~a 76 (720)
|++|||.|+ |.++..+++.+.+.|++++++..++ ....+ . . .+ .. +.+. .++.|.+.+.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d~~~l~~~~ 74 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE-------GDINDHETLVKAI 74 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEE-------CCTTCHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEE-------eCCCCHHHHHHHH
Confidence 458999996 8999999999999999998885443 11100 0 0 00 01 2222 2567777777776
Q ss_pred HHcCCCEEEeCCCCCc--ccHHHHHHHHHCC-Ce
Q psy15251 77 VRSQCQAIHPGYGFLS--ENAEFANAVEGNR-LI 107 (720)
Q Consensus 77 ~~~~~daI~pg~g~ls--E~~~~a~~~~~~g-l~ 107 (720)
+ ++|+|+-..+... ....+.+++.+.| +.
T Consensus 75 ~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 106 (307)
T 2gas_A 75 K--QVDIVICAAGRLLIEDQVKIIKAIKEAGNVK 106 (307)
T ss_dssp T--TCSEEEECSSSSCGGGHHHHHHHHHHHCCCS
T ss_pred h--CCCEEEECCcccccccHHHHHHHHHhcCCce
Confidence 5 6888876555321 1234566777776 53
No 183
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=90.20 E-value=1.6 Score=44.69 Aligned_cols=69 Identities=16% Similarity=0.219 Sum_probs=44.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
+++|||.| .|-++..+++.+.+.|++++++...+.... . ..-.+.. .+.. .+.+.++.+ ++|+|+-
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~--~~~~~~~------~Dl~-~~~~~~~~~--~~d~Vih 68 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--I--NDYEYRV------SDYT-LEDLINQLN--DVDAVVH 68 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEE------CCCC-HHHHHHHTT--TCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--C--CceEEEE------cccc-HHHHHHhhc--CCCEEEE
Confidence 46999999 589999999999999999988865422211 1 1111221 1444 566666665 7898875
Q ss_pred CCC
Q psy15251 87 GYG 89 (720)
Q Consensus 87 g~g 89 (720)
..+
T Consensus 69 ~a~ 71 (311)
T 3m2p_A 69 LAA 71 (311)
T ss_dssp CCC
T ss_pred ccc
Confidence 544
No 184
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=90.18 E-value=0.27 Score=53.96 Aligned_cols=71 Identities=15% Similarity=0.271 Sum_probs=50.2
Q ss_pred CCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecCCCCCcceEE--eCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccc
Q psy15251 132 AEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVRGGGGKGMRI--VRDSANFLAQLRSAQRESQSAFNDSKVLLEKYI 209 (720)
Q Consensus 132 ~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~g~Gg~Gv~~--v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI 209 (720)
.=+|.+|++. +.+.++.....+.+. -+|+||..|.||.||.+ --+.++..+..+++... ...++.|+++
T Consensus 339 ~il~~VpT~~--c~~~~~~~~vl~~l~-~lViKp~~g~gg~gv~iG~~~s~~e~~~~~~~i~~~------p~~yIaQe~v 409 (474)
T 3n6x_A 339 PILSNVPTYQ--LSKADDLKYVLDNLA-ELVVKEVQGSGGYGMLVGPAASKQELEDFRQRILAN------PANYIAQPTL 409 (474)
T ss_dssp CSSEECCCEE--TTSHHHHHHHHHSGG-GEEEEECCCE-----EEGGGCCHHHHHHHHHHHHHS------GGGEEEEECC
T ss_pred hhccCCCcee--cCCHHHHHHHHhchh-heEEEecCCCCCCceEECCcCCHHHHHHHHHHHHhC------CCCEEEeecc
Confidence 3356667777 778888887777765 89999999999999988 45677888877777642 3469999999
Q ss_pred cC
Q psy15251 210 QS 211 (720)
Q Consensus 210 ~g 211 (720)
+-
T Consensus 410 ~l 411 (474)
T 3n6x_A 410 AL 411 (474)
T ss_dssp CC
T ss_pred CC
Confidence 73
No 185
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=89.50 E-value=2.9 Score=42.79 Aligned_cols=121 Identities=14% Similarity=0.180 Sum_probs=73.2
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCC-CCCCcc-c------cccc-EEEEeCCCCCcccccCHHHHHHHH
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDI-DADALH-V------KMAD-EAYRLEGKSSLDTYLNQAKILDIA 76 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~-d~~~~~-~------~~aD-~~~~i~~~~~~~~~~~~~~i~~~a 76 (720)
+|++|||.|+ |.++..+++.+.+.|++++++..++ +..... . .... +.+. .++.|.+.+.+++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~-------~D~~d~~~l~~a~ 75 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIE-------GEMEEHEKMVSVL 75 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEE-------CCTTCHHHHHHHH
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEE-------ecCCCHHHHHHHH
Confidence 4568999995 8999999999999999998886543 211000 0 0001 2222 2667778887777
Q ss_pred HHcCCCEEEeCCCCC--cccHHHHHHHHHCC-Ce-Ee----CCCH-------HHHHHhcCHHHHHHHHHHCCCCC
Q psy15251 77 VRSQCQAIHPGYGFL--SENAEFANAVEGNR-LI-FV----GPSS-------EAIRNMGIKSTSKEIMIKAEVPV 136 (720)
Q Consensus 77 ~~~~~daI~pg~g~l--sE~~~~a~~~~~~g-l~-~~----Gp~~-------~~i~~~~DK~~~r~~l~~~Gvp~ 136 (720)
+ ++|+|+-..+.. .-...+.+++.+.| +. |+ |.+. ........|....+++++.|++.
T Consensus 76 ~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~ 148 (321)
T 3c1o_A 76 K--QVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPY 148 (321)
T ss_dssp T--TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHHHHTCCB
T ss_pred c--CCCEEEECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHHHHHHHHHHHHHHcCCCe
Confidence 5 588888665532 12345677777777 53 33 1100 00112256777888888888775
No 186
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=89.44 E-value=0.068 Score=56.97 Aligned_cols=56 Identities=21% Similarity=0.220 Sum_probs=42.4
Q ss_pred EecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 663 VLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 663 ~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
..|+.|+.-..=..-..|++- -+..|.++.+|+|.++++++||.|++|++|++|+.
T Consensus 10 ~~v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld~ 65 (369)
T 4dk0_A 10 EEVKRGNIEKNVVATGSIESI-NTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDS 65 (369)
T ss_dssp CCCCEECCCCCCEEEEEEECS-SCCCBCCCSCSBCCEECCCTTSCCCSSCCCEECCC
T ss_pred EEEEecceeEEEEEeEEEEee-eeEEEecCCCcEEEEEEECCCCEECCCCEEEEEcC
Confidence 334444444444455666654 35679999999999999999999999999999974
No 187
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=89.40 E-value=1.5 Score=46.21 Aligned_cols=80 Identities=9% Similarity=-0.029 Sum_probs=51.2
Q ss_pred cCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCC--cccccc--------cEEEEeCCCCCcccccCHHHHH
Q psy15251 5 SCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADA--LHVKMA--------DEAYRLEGKSSLDTYLNQAKIL 73 (720)
Q Consensus 5 ~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~--~~~~~a--------D~~~~i~~~~~~~~~~~~~~i~ 73 (720)
.+|+++|||.|+ |.++..+++.+.+.|++++++........ ....+. .....+. .+..|.+.+.
T Consensus 21 ~~M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~Dl~d~~~~~ 95 (375)
T 1t2a_A 21 GHMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHY-----GDLTDSTCLV 95 (375)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEE-----CCTTCHHHHH
T ss_pred hhcCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEE-----ccCCCHHHHH
Confidence 345689999994 89999999999999999988865433210 001110 1111111 2556778888
Q ss_pred HHHHHcCCCEEEeCCC
Q psy15251 74 DIAVRSQCQAIHPGYG 89 (720)
Q Consensus 74 ~~a~~~~~daI~pg~g 89 (720)
++++..++|+|+-.-+
T Consensus 96 ~~~~~~~~d~vih~A~ 111 (375)
T 1t2a_A 96 KIINEVKPTEIYNLGA 111 (375)
T ss_dssp HHHHHHCCSEEEECCS
T ss_pred HHHHhcCCCEEEECCC
Confidence 8888778898886554
No 188
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=89.05 E-value=0.77 Score=46.82 Aligned_cols=73 Identities=14% Similarity=0.067 Sum_probs=48.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcC-CcEEEEeeCCCCCCc-cccccc-EEEEeCCCCCcccccCHHHHHHHHHHcCCCE
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMG-IRVVSVYSDIDADAL-HVKMAD-EAYRLEGKSSLDTYLNQAKILDIAVRSQCQA 83 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G-~~~v~v~s~~d~~~~-~~~~aD-~~~~i~~~~~~~~~~~~~~i~~~a~~~~~da 83 (720)
+++|||.|+ |.++..+++.+.+.| ++++++..+++.... ...... +.+. .++.|.+.+.++.+ ++|+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~-------~D~~d~~~l~~~~~--~~d~ 75 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQ-------GDQDDQVIMELALN--GAYA 75 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEE-------CCTTCHHHHHHHHT--TCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEE-------ecCCCHHHHHHHHh--cCCE
Confidence 568999996 899999999999999 999888654432110 000001 2222 25667777777664 5888
Q ss_pred EEeCCC
Q psy15251 84 IHPGYG 89 (720)
Q Consensus 84 I~pg~g 89 (720)
|+-..+
T Consensus 76 vi~~a~ 81 (299)
T 2wm3_A 76 TFIVTN 81 (299)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 876544
No 189
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A*
Probab=88.51 E-value=0.56 Score=53.37 Aligned_cols=97 Identities=15% Similarity=0.219 Sum_probs=67.5
Q ss_pred HHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCC-CC---CcccCCCCCHHHHHHHHHHhCCcEEEeecCCCCC
Q psy15251 96 EFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVP-VI---PGYHGEDQNEEILMEQAERIGYPLMIKAVRGGGG 171 (720)
Q Consensus 96 ~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp-~p---~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~g~Gg 171 (720)
.+.+++++.++.++.|....+ +.||..+.-+.+.+ | .| |++. ..+. ++ ..- .+|+||..|..|
T Consensus 474 ~ll~~l~~~~v~iieP~~~~l--lsNKailalLw~l~--p~hp~LLpT~f--~~~~-~l----~~~--~yV~KPi~gReG 540 (619)
T 2io8_A 474 RLIDVLLRPEVLVFEPLWTVI--PGNKAILPILWSLF--PHHRYLLDTDF--TVND-EL----VKT--GYAVKPIAGRCG 540 (619)
T ss_dssp CHHHHHTCTTCEEESCGGGGT--TTSTTHHHHHHHHS--TTCTTCCCEES--SCCH-HH----HHH--CEEEEETTCCTT
T ss_pred HHHHHHHhCCCEEECHHHHHH--hhhHHHHHHHHHhC--CCCCCCCCeee--cCCc-cc----ccC--CEEEccCCCCCC
Confidence 567788888899998877766 89999999888865 3 33 6654 2333 22 111 599999999999
Q ss_pred cceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccCC
Q psy15251 172 KGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQSP 212 (720)
Q Consensus 172 ~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g~ 212 (720)
.||.+++..++.. .+....|++.+++.|+|++-+
T Consensus 541 ~nV~i~~~~~~~~-------~~~~~~y~~~~~IyQe~~~lp 574 (619)
T 2io8_A 541 SNIDLVSHHEEVL-------DKTSGKFAEQKNIYQQLWCLP 574 (619)
T ss_dssp TTCEEECTTSCEE-------EECCCTTTTSCEEEEECCCCC
T ss_pred CCEEEEeCCChhH-------hhccccccCCCeEEEEecCCC
Confidence 9999997622210 111233556789999999843
No 190
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.40 E-value=0.84 Score=41.67 Aligned_cols=90 Identities=13% Similarity=0.114 Sum_probs=52.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCC--Cccccc-ccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDAD--ALHVKM-ADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~--~~~~~~-aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.++++|+|.|.++..+++.+.+.|++++++..++... ...... .+..+..+ +..+.+.+.+ +.-.++|+|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~g------d~~~~~~l~~-a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPG------DSNDSSVLKK-AGIDRCRAI 75 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEES------CTTSHHHHHH-HTTTTCSEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEc------CCCCHHHHHH-cChhhCCEE
Confidence 3589999999999999999999999999996542110 000001 11222222 3345544433 333578888
Q ss_pred EeCCCCCcccHHHHHHHHHC
Q psy15251 85 HPGYGFLSENAEFANAVEGN 104 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~ 104 (720)
+...+.-..|...+..+.+.
T Consensus 76 i~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 76 LALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp EECSSCHHHHHHHHHHHHHH
T ss_pred EEecCChHHHHHHHHHHHHH
Confidence 87665333344444444443
No 191
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=88.40 E-value=1.9 Score=45.57 Aligned_cols=77 Identities=6% Similarity=-0.105 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCC--cccccc---------cEEEEeCCCCCcccccCHHHHHH
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADA--LHVKMA---------DEAYRLEGKSSLDTYLNQAKILD 74 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~--~~~~~a---------D~~~~i~~~~~~~~~~~~~~i~~ 74 (720)
|+++|||.|+ |.++..+++.+.+.|++|+++........ ....+. ...+.. .+..+.+.+.+
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~Dl~d~~~~~~ 100 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY------ADLTDASSLRR 100 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEE------CCTTCHHHHHH
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEE------CCCCCHHHHHH
Confidence 4589999996 89999999999999999988865433210 001111 111111 25567778888
Q ss_pred HHHHcCCCEEEeCCC
Q psy15251 75 IAVRSQCQAIHPGYG 89 (720)
Q Consensus 75 ~a~~~~~daI~pg~g 89 (720)
+++..++|+|+-..+
T Consensus 101 ~~~~~~~d~Vih~A~ 115 (381)
T 1n7h_A 101 WIDVIKPDEVYNLAA 115 (381)
T ss_dssp HHHHHCCSEEEECCS
T ss_pred HHHhcCCCEEEECCc
Confidence 887778898875544
No 192
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=88.02 E-value=1.2 Score=46.22 Aligned_cols=93 Identities=8% Similarity=-0.011 Sum_probs=62.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHH-----HHcCC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIA-----VRSQC 81 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a-----~~~~~ 81 (720)
|.|+.|+|. |.++...++++++.+.+++++++...... ..+.. + +...-|.+.+.+++.+ ...++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~---~~~~~-~-----~~~~~~~~~~~ll~~~~~l~~~~~~v 73 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVG---LVDSF-F-----PEAEFFTEPEAFEAYLEDLRDRGEGV 73 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG---GGGGT-C-----TTCEEESCHHHHHHHHHHHHHTTCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH---HHHhh-C-----CCCceeCCHHHHHHHhhhhcccCCCC
Confidence 569999998 67999999999999999998874322221 11111 1 1223467788887655 45679
Q ss_pred CEEEeCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 82 QAIHPGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 82 daI~pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
|+|+...-. .-....+..+.++|..++.
T Consensus 74 D~V~I~tP~-~~H~~~~~~al~aGkhVl~ 101 (312)
T 3o9z_A 74 DYLSIASPN-HLHYPQIRMALRLGANALS 101 (312)
T ss_dssp SEEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred cEEEECCCc-hhhHHHHHHHHHCCCeEEE
Confidence 998865432 2346778888888988764
No 193
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=87.98 E-value=2.1 Score=44.41 Aligned_cols=68 Identities=12% Similarity=0.070 Sum_probs=46.9
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
..++|||.|+ |.++..+++.+.+.|++|+++....... -. +.+. .+..|.+.+.++++ ++|+|+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-----~~-~~~~-------~Dl~d~~~~~~~~~--~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGT-----GG-EEVV-------GSLEDGQALSDAIM--GVSAVL 82 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSS-----CC-SEEE-------SCTTCHHHHHHHHT--TCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCC-----Cc-cEEe-------cCcCCHHHHHHHHh--CCCEEE
Confidence 4678999996 8999999999999999999986544331 01 1222 25567777777765 789887
Q ss_pred eCCC
Q psy15251 86 PGYG 89 (720)
Q Consensus 86 pg~g 89 (720)
-.-+
T Consensus 83 h~A~ 86 (347)
T 4id9_A 83 HLGA 86 (347)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 5543
No 194
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=87.81 E-value=1.7 Score=44.78 Aligned_cols=73 Identities=19% Similarity=0.219 Sum_probs=49.8
Q ss_pred CEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCCCCccccccc--EEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 9 DSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMAD--EAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 9 ~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD--~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
++|||.| .|.++..+++.+.+.|++++++........ ..+.+ +.+. .+..+.+.+.++.++.++|+|+
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~-------~D~~~~~~~~~~~~~~~~d~vi 72 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE--DAITEGAKFYN-------GDLRDKAFLRDVFTQENIEAVM 72 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGSCTTSEEEE-------CCTTCHHHHHHHHHHSCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch--hhcCCCcEEEE-------CCCCCHHHHHHHHhhcCCCEEE
Confidence 5899998 589999999999999999988854332211 11111 2222 2556777888888777899888
Q ss_pred eCCCC
Q psy15251 86 PGYGF 90 (720)
Q Consensus 86 pg~g~ 90 (720)
-..+.
T Consensus 73 h~a~~ 77 (330)
T 2c20_A 73 HFAAD 77 (330)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 65543
No 195
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=87.06 E-value=1.2 Score=45.53 Aligned_cols=34 Identities=9% Similarity=0.062 Sum_probs=30.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|+.+|+|+|+|..++.++..+++.|++++++...
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 4579999999999999999999999998888543
No 196
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=86.79 E-value=2.6 Score=44.62 Aligned_cols=74 Identities=18% Similarity=0.049 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
+|++|||.|+ |.++..+++.+.+.|++++++..............-+.+. .+..|.+.+.++++ ++|+|+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~-------~Dl~d~~~~~~~~~--~~d~Vi 98 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHL-------VDLRVMENCLKVTE--GVDHVF 98 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEE-------CCTTSHHHHHHHHT--TCSEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEE-------CCCCCHHHHHHHhC--CCCEEE
Confidence 4679999996 8999999999999999998886544322111100112222 15566777776664 789887
Q ss_pred eCCC
Q psy15251 86 PGYG 89 (720)
Q Consensus 86 pg~g 89 (720)
-..+
T Consensus 99 h~A~ 102 (379)
T 2c5a_A 99 NLAA 102 (379)
T ss_dssp ECCC
T ss_pred ECce
Confidence 5544
No 197
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=86.33 E-value=0.83 Score=48.48 Aligned_cols=94 Identities=11% Similarity=0.098 Sum_probs=54.9
Q ss_pred CCCccCCCCEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHH
Q psy15251 1 MTIASCVLDSILIANRGEIACR-IMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVR 78 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~G~~a~~-iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~ 78 (720)
|+|+++ +-||.|+|.|.++.. .++.+++. +++++++++. +.......+ .....|.+.+.++ ..
T Consensus 1 M~~~~~-~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~-~~~~~~~~~----------~~~~~~~~~~~ll---~~ 65 (364)
T 3e82_A 1 MSLSNN-TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR-DEEKVKRDL----------PDVTVIASPEAAV---QH 65 (364)
T ss_dssp -------CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS-CHHHHHHHC----------TTSEEESCHHHHH---TC
T ss_pred CCCCCC-cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC-CHHHHHhhC----------CCCcEECCHHHHh---cC
Confidence 666544 358999999999987 77888776 8888877642 221110101 0112456666544 45
Q ss_pred cCCCEEEeCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 79 SQCQAIHPGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 79 ~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
.++|+|+...-. ......+..+.++|..++.
T Consensus 66 ~~~D~V~i~tp~-~~H~~~~~~al~aGk~Vl~ 96 (364)
T 3e82_A 66 PDVDLVVIASPN-ATHAPLARLALNAGKHVVV 96 (364)
T ss_dssp TTCSEEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEeCCh-HHHHHHHHHHHHCCCcEEE
Confidence 679998865421 2345667777788887764
No 198
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=86.28 E-value=1.4 Score=44.86 Aligned_cols=73 Identities=15% Similarity=0.073 Sum_probs=50.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHc--CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKM--GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~--G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.++|||.|+ |.++..+++.+.+. |++++++......... ..-. +.+. .+..|.+.+.++.++.++|+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~-~~~~-------~D~~d~~~~~~~~~~~~~d~v 72 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDV-VNSG-PFEV-------VNALDFNQIEHLVEVHKITDI 72 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHH-HHSS-CEEE-------CCTTCHHHHHHHHHHTTCCEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccc-cCCC-ceEE-------ecCCCHHHHHHHHhhcCCCEE
Confidence 358999996 89999999999998 8999888644332111 0001 1222 255677888888887889988
Q ss_pred EeCCC
Q psy15251 85 HPGYG 89 (720)
Q Consensus 85 ~pg~g 89 (720)
+-..+
T Consensus 73 ih~a~ 77 (312)
T 2yy7_A 73 YLMAA 77 (312)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 85544
No 199
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=86.12 E-value=1.7 Score=44.54 Aligned_cols=67 Identities=10% Similarity=0.028 Sum_probs=39.9
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
.++|||.|+ |.++..+++.+.+.|++++++...... ...+. .+..+.+.+.++.+..++|+|+-
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~-------~Dl~d~~~~~~~~~~~~~d~vih 66 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------PKFEQ-------VNLLDSNAVHHIIHDFQPHVIVH 66 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHHCCSEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------CCeEE-------ecCCCHHHHHHHHHhhCCCEEEE
Confidence 458999996 899999999999999999888532221 01121 13445556666666668898875
Q ss_pred CCC
Q psy15251 87 GYG 89 (720)
Q Consensus 87 g~g 89 (720)
..+
T Consensus 67 ~A~ 69 (315)
T 2ydy_A 67 CAA 69 (315)
T ss_dssp CC-
T ss_pred CCc
Confidence 544
No 200
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=86.09 E-value=2.4 Score=43.75 Aligned_cols=77 Identities=13% Similarity=0.032 Sum_probs=51.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCCCCccccc-----ccEEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKM-----ADEAYRLEGKSSLDTYLNQAKILDIAVRSQC 81 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~-----aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 81 (720)
.++|||.| .|.++..+++.+.+.|+++++++............ ......+. .+..|.+.+.++++..++
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~~~~~~~~~~~ 79 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHE-----TDVSDERALARIFDAHPI 79 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEEC-----CCTTCHHHHHHHHHHSCC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEE-----eecCCHHHHHHHHhccCC
Confidence 45899998 58999999999999999998885443322211100 00111111 256678888888888889
Q ss_pred CEEEeCCC
Q psy15251 82 QAIHPGYG 89 (720)
Q Consensus 82 daI~pg~g 89 (720)
|.|+-.-+
T Consensus 80 d~vih~A~ 87 (341)
T 3enk_A 80 TAAIHFAA 87 (341)
T ss_dssp CEEEECCC
T ss_pred cEEEECcc
Confidence 98875444
No 201
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=85.95 E-value=2.6 Score=43.59 Aligned_cols=77 Identities=16% Similarity=0.166 Sum_probs=50.5
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccc-cccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 7 VLDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDADALHVK-MADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 7 ~~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~-~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.|++|||.| .|.++..+++.+.+.|++++++............ +..-.+.. .+..|.+.+.++++..++|+|
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~------~Dl~d~~~~~~~~~~~~~D~v 93 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVE------GSIADHALVNQLIGDLQPDAV 93 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEE------CCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEE------EeCCCHHHHHHHHhccCCcEE
Confidence 456899998 5899999999999999999888644322111110 11111211 255677778888877779988
Q ss_pred EeCCC
Q psy15251 85 HPGYG 89 (720)
Q Consensus 85 ~pg~g 89 (720)
+-..+
T Consensus 94 ih~A~ 98 (333)
T 2q1w_A 94 VHTAA 98 (333)
T ss_dssp EECCC
T ss_pred EECce
Confidence 85544
No 202
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=85.92 E-value=4.7 Score=40.19 Aligned_cols=77 Identities=10% Similarity=0.117 Sum_probs=46.6
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc-CCcEEEEeeCCCCCCccc-ccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 10 SILIANR-GEIACRIMRTAKKM-GIRVVSVYSDIDADALHV-KMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~-~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
||+|+|. |.++..+++.+.+. |++++++....+...... .-+|-.+... +.......+..|.+.+.+.|+-
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT------~p~a~~~~~~~a~~~g~~~Vig 75 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFT------HPDVVMGNLEFLIDNGIHAVVG 75 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECS------CTTTHHHHHHHHHHTTCEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEcc------ChHHHHHHHHHHHHcCCCEEEc
Confidence 7999995 99999999999876 999988764322111111 1345444221 1123345556667777777765
Q ss_pred CCCCCc
Q psy15251 87 GYGFLS 92 (720)
Q Consensus 87 g~g~ls 92 (720)
+.|+..
T Consensus 76 TTG~~~ 81 (245)
T 1p9l_A 76 TTGFTA 81 (245)
T ss_dssp CCCCCH
T ss_pred CCCCCH
Confidence 555443
No 203
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.89 E-value=0.79 Score=44.65 Aligned_cols=87 Identities=14% Similarity=-0.054 Sum_probs=52.5
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCCC
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGYG 89 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~g 89 (720)
||+|+|.|.++..+++.+.+.|+++++++.+++.........+..+..+ +..+.+.+. .+.-.++|+++...+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~g------d~~~~~~l~-~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHG------DGSHKEILR-DAEVSKNDVVVILTP 74 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEES------CTTSHHHHH-HHTCCTTCEEEECCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEc------CCCCHHHHH-hcCcccCCEEEEecC
Confidence 6999999999999999999999999999655432211111112223322 334544433 333457898887665
Q ss_pred CCcccHHHHHHHHH
Q psy15251 90 FLSENAEFANAVEG 103 (720)
Q Consensus 90 ~lsE~~~~a~~~~~ 103 (720)
.-..|...+..+.+
T Consensus 75 ~d~~n~~~~~~a~~ 88 (218)
T 3l4b_C 75 RDEVNLFIAQLVMK 88 (218)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 43334444444444
No 204
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=85.66 E-value=1.5 Score=47.32 Aligned_cols=94 Identities=4% Similarity=-0.030 Sum_probs=60.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCC---cEEEEeeCCCCCCcc-cccc------cEEEEeCCCCCcccccCHHHHHHHHH
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGI---RVVSVYSDIDADALH-VKMA------DEAYRLEGKSSLDTYLNQAKILDIAV 77 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~---~~v~v~s~~d~~~~~-~~~a------D~~~~i~~~~~~~~~~~~~~i~~~a~ 77 (720)
|+||||+|.|.++..+++.+.+.|- .+++++.+.+..... ..+. -..+.+ +..+.+.+.++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~-------D~~d~~~l~~~l~ 73 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTV-------DADSIEELVALIN 73 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEEC-------CTTCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEe-------cCCCHHHHHHHHH
Confidence 3689999999999999999999983 555554332211000 0000 012222 4456778888888
Q ss_pred HcCCCEEEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 78 RSQCQAIHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 78 ~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
+.++|+|+-..+.. .+..+...|.+.|..++
T Consensus 74 ~~~~DvVin~ag~~-~~~~v~~a~l~~g~~vv 104 (405)
T 4ina_A 74 EVKPQIVLNIALPY-QDLTIMEACLRTGVPYL 104 (405)
T ss_dssp HHCCSEEEECSCGG-GHHHHHHHHHHHTCCEE
T ss_pred hhCCCEEEECCCcc-cChHHHHHHHHhCCCEE
Confidence 88899988665543 24667788888888876
No 205
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=85.43 E-value=18 Score=38.48 Aligned_cols=36 Identities=14% Similarity=0.120 Sum_probs=32.2
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCC
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDID 42 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d 42 (720)
+..+++|.|.|..+..+++-++.+||+|+++++.++
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 456999999999999999999999999999976554
No 206
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=85.35 E-value=4.8 Score=40.20 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=49.1
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS 79 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~ 79 (720)
|.+.....|++||.|+ |.++..+++.+.+.|+++++++.+.+.. .+ + ..+.. +..|.+.+.+++++.
T Consensus 1 m~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~-~-~~~~~-------Dl~~~~~v~~~~~~~ 68 (264)
T 2dtx_A 1 MGFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE---AK-Y-DHIEC-------DVTNPDQVKASIDHI 68 (264)
T ss_dssp -CCGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS---CS-S-EEEEC-------CTTCHHHHHHHHHHH
T ss_pred CCccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccC---Cc-e-EEEEe-------cCCCHHHHHHHHHHH
Confidence 5555445679999984 7899999999999999998886544331 00 1 22222 445555555544432
Q ss_pred -----CCCEEEeCCC
Q psy15251 80 -----QCQAIHPGYG 89 (720)
Q Consensus 80 -----~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 69 ~~~~g~iD~lv~~Ag 83 (264)
T 2dtx_A 69 FKEYGSISVLVNNAG 83 (264)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 6898886554
No 207
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=85.12 E-value=0.33 Score=52.71 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=30.8
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCC
Q psy15251 9 DSILIANRGEIACRIMRTAKKMGIRVVSVYSDID 42 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d 42 (720)
.+|+|+|.|..+..+++.+++.|+++++++.+++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3799999999999999999999999999976654
No 208
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=85.10 E-value=0.84 Score=44.96 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=29.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
.+++||+|+|+.|.+.++.+.+.|.+++++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 57999999999999999999999999988854
No 209
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=84.73 E-value=3.5 Score=40.03 Aligned_cols=36 Identities=17% Similarity=0.289 Sum_probs=31.1
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 5 SCVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 5 ~~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.+.+|++||+|.|..+..+++.+++.||+++.+..|
T Consensus 9 ~~~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd 44 (220)
T 4ea9_A 9 SLAIGGVVIIGGGGHAKVVIESLRACGETVAAIVDA 44 (220)
T ss_dssp CCCSSCEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred ccCCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeC
Confidence 346789999999999999999999999998887543
No 210
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=84.64 E-value=1.8 Score=43.54 Aligned_cols=89 Identities=10% Similarity=0.119 Sum_probs=53.8
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHc--CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 9 DSILIANR-GEIACRIMRTAKKM--GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 9 ~~iLI~~~-G~~a~~iira~~~~--G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
++|||.|+ |.++..+++.+.+. |++++++..++.........--+.+. .+..|.+.+.++.+ ++|+|+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~-------~D~~d~~~l~~~~~--~~d~vi 71 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRH-------GDYNQPESLQKAFA--GVSKLL 71 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEE-------CCTTCHHHHHHHTT--TCSEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEE-------eccCCHHHHHHHHh--cCCEEE
Confidence 37899986 99999999999998 99999886543321100000112222 25667777777665 588887
Q ss_pred eCCCCCcc---c----HHHHHHHHHCCC
Q psy15251 86 PGYGFLSE---N----AEFANAVEGNRL 106 (720)
Q Consensus 86 pg~g~lsE---~----~~~a~~~~~~gl 106 (720)
-..+...+ | ..+.+++.+.|+
T Consensus 72 ~~a~~~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 72 FISGPHYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp ECCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred EcCCCCcCchHHHHHHHHHHHHHHHcCC
Confidence 54442111 1 123556666665
No 211
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=84.45 E-value=0.94 Score=45.83 Aligned_cols=34 Identities=24% Similarity=0.372 Sum_probs=30.0
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCC
Q psy15251 9 DSILIANRGEIACRIMRTAKKMGIRVVSVYSDID 42 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d 42 (720)
++|||.|.|-++..+++.+.+.|++++++.....
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5899999999999999999999999999865443
No 212
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=84.37 E-value=2.2 Score=45.14 Aligned_cols=76 Identities=11% Similarity=0.132 Sum_probs=46.9
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcC-CcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMG-IRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G-~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.+++|||.|+ |.++..+++.+.+.| ++++++...................+. .+..+.+.+.++++ ++|+|
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~-----~Dl~d~~~l~~~~~--~~d~V 103 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSE-----TSITDDALLASLQD--EYDYV 103 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEEC-----SCTTCHHHHHHCCS--CCSEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEE-----CCCCCHHHHHHHhh--CCCEE
Confidence 3568999995 899999999999999 999888543322111110011111111 24556666665554 78988
Q ss_pred EeCCC
Q psy15251 85 HPGYG 89 (720)
Q Consensus 85 ~pg~g 89 (720)
+-..+
T Consensus 104 ih~A~ 108 (377)
T 2q1s_A 104 FHLAT 108 (377)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 75544
No 213
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=84.29 E-value=1.2 Score=39.33 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=28.0
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
+|+|+|.|.++..+++.+.+.|+++++++.+
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 7999999999999999999999998888543
No 214
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=84.27 E-value=3.5 Score=40.88 Aligned_cols=84 Identities=10% Similarity=0.069 Sum_probs=46.8
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccc-cccEEEEeCCCCCcccccCHHHHHHHHHH
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVK-MADEAYRLEGKSSLDTYLNQAKILDIAVR 78 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~-~aD~~~~i~~~~~~~~~~~~~~i~~~a~~ 78 (720)
|+|.. ..|++||.|+ +.++..+++.+.+.|+++++++.+.+....... +......+. -+..+.+.+.+++++
T Consensus 1 M~~~l-~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~~~~~v~~~~~~ 74 (257)
T 3tpc_A 1 MVMQL-KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRN-----ADVTNEADATAALAF 74 (257)
T ss_dssp ---CC-TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEE-----CCTTCHHHHHHHHHH
T ss_pred Ccccc-CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEE-----ccCCCHHHHHHHHHH
Confidence 56543 3578999985 789999999999999999888654432211111 111111111 244555555555443
Q ss_pred c-----CCCEEEeCCCC
Q psy15251 79 S-----QCQAIHPGYGF 90 (720)
Q Consensus 79 ~-----~~daI~pg~g~ 90 (720)
. ++|.++-.-|.
T Consensus 75 ~~~~~g~id~lv~nAg~ 91 (257)
T 3tpc_A 75 AKQEFGHVHGLVNCAGT 91 (257)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 3 68988865553
No 215
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=84.10 E-value=1.3 Score=46.93 Aligned_cols=115 Identities=14% Similarity=0.059 Sum_probs=70.9
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCCC
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGYG 89 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~g 89 (720)
||||+|.|.++..+++.+.+ .+++.+++.+..........+ ..+.+ +..|.+.+.++++ ++|+|+-..+
T Consensus 18 kilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~-~~~~~-------d~~d~~~l~~~~~--~~DvVi~~~p 86 (365)
T 3abi_A 18 KVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFA-TPLKV-------DASNFDKLVEVMK--EFELVIGALP 86 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTS-EEEEC-------CTTCHHHHHHHHT--TCSEEEECCC
T ss_pred EEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccC-CcEEE-------ecCCHHHHHHHHh--CCCEEEEecC
Confidence 69999999999999999976 467665533221111111112 22332 4467788888776 5688886665
Q ss_pred CCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcc
Q psy15251 90 FLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGY 140 (720)
Q Consensus 90 ~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~ 140 (720)
.. -+..++++|.+.|..++-.+... ..-..+.+.++++|+...+..
T Consensus 87 ~~-~~~~v~~~~~~~g~~yvD~s~~~----~~~~~l~~~a~~~g~~~i~~~ 132 (365)
T 3abi_A 87 GF-LGFKSIKAAIKSKVDMVDVSFMP----ENPLELRDEAEKAQVTIVFDA 132 (365)
T ss_dssp GG-GHHHHHHHHHHHTCEEEECCCCS----SCGGGGHHHHHHTTCEEECCC
T ss_pred Cc-ccchHHHHHHhcCcceEeeeccc----hhhhhhhhhhccCCceeeecC
Confidence 32 24788999999999987543211 011123556677777766643
No 216
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=83.90 E-value=3.8 Score=42.27 Aligned_cols=75 Identities=8% Similarity=-0.021 Sum_probs=49.9
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCc-ccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 9 DSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADAL-HVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 9 ~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~-~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
++|||.|+ |.++..+++.+.+.|++++++......... ...+..-.+.. .+..|.+.+.+++++.++|+|+-
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~------~Dl~d~~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIE------GSVTDAGLLERAFDSFKPTHVVH 94 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEE------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEE------eeCCCHHHHHHHHhhcCCCEEEE
Confidence 58999986 899999999999999999888643322110 01111111211 25567777878877778998886
Q ss_pred CCC
Q psy15251 87 GYG 89 (720)
Q Consensus 87 g~g 89 (720)
.-+
T Consensus 95 ~A~ 97 (330)
T 2pzm_A 95 SAA 97 (330)
T ss_dssp CCC
T ss_pred CCc
Confidence 554
No 217
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=83.85 E-value=0.78 Score=46.53 Aligned_cols=33 Identities=30% Similarity=0.522 Sum_probs=29.8
Q ss_pred CeeecCCcceeeEEecCCCCeeeCC--CeEEEEEe
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTG--DPIMVIIA 682 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g--~~l~~~ea 682 (720)
..|+||+.|+|..+.+++|+.|..| ++|+.|..
T Consensus 131 ~~I~AP~~G~V~~~~~~~G~~v~~g~~~~l~~i~~ 165 (277)
T 2f1m_A 131 TKVTSPISGRIGKSNVTEGALVQNGQATALATVQQ 165 (277)
T ss_dssp TEECCSSCEEECCCSSCBTCEECTTCSSCSEEEEE
T ss_pred CEEECCCCeEEEeEEcCCCCEEcCCCCceeEEEec
Confidence 3699999999999999999999999 58888864
No 218
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=83.85 E-value=4.5 Score=38.84 Aligned_cols=71 Identities=8% Similarity=-0.004 Sum_probs=48.0
Q ss_pred EEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccC-HHHHHHHHHHcCCCEEEeC
Q psy15251 10 SILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLN-QAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 10 ~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~-~~~i~~~a~~~~~daI~pg 87 (720)
||||.| .|.++..+++.+.+.|++++++..+++..... ..-.+.. -+..| .+.+.++++ ++|+|+-.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~------~D~~d~~~~~~~~~~--~~d~vi~~ 70 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVH------FDVDWTPEEMAKQLH--GMDAIINV 70 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEE------CCTTSCHHHHHTTTT--TCSEEEEC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEE------ecccCCHHHHHHHHc--CCCEEEEC
Confidence 799998 68999999999999999999886544322211 1222221 25566 677766665 68988866
Q ss_pred CCCC
Q psy15251 88 YGFL 91 (720)
Q Consensus 88 ~g~l 91 (720)
.+..
T Consensus 71 ag~~ 74 (219)
T 3dqp_A 71 SGSG 74 (219)
T ss_dssp CCCT
T ss_pred CcCC
Confidence 6543
No 219
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=83.46 E-value=0.63 Score=53.85 Aligned_cols=33 Identities=24% Similarity=0.260 Sum_probs=30.9
Q ss_pred EEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 687 YVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 687 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
..|.||.+|+|.++.+++||.|++||+|++|+.
T Consensus 650 ~~v~ap~~G~V~~v~V~~Gd~V~~Gq~L~~iEa 682 (718)
T 3bg3_A 650 GQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSA 682 (718)
T ss_dssp SCEECSSCEEEEEECSCTTCCBCTTCCCEEEES
T ss_pred ceEeCCCCeEEEEEEeCCCCeeCCCCEEEEEec
Confidence 359999999999999999999999999999974
No 220
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=82.96 E-value=3.5 Score=40.79 Aligned_cols=71 Identities=13% Similarity=0.237 Sum_probs=47.1
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc-----
Q psy15251 6 CVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS----- 79 (720)
Q Consensus 6 ~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~----- 79 (720)
.|.|++||.|+ |.++..+++.+.+.|+++++++.+..... ...+.+ +..|.+.+.+++++.
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~-------d~~d~~~v~~~~~~~~~~~g 86 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTI-------KDSGEEEIKSVIEKINSKSI 86 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEEC-------SCSSHHHHHHHHHHHHTTTC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEE-------EeCCHHHHHHHHHHHHHHcC
Confidence 46789999985 68999999999999999988865544322 223333 234555555555543
Q ss_pred CCCEEEeCCC
Q psy15251 80 QCQAIHPGYG 89 (720)
Q Consensus 80 ~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 87 ~iD~li~~Ag 96 (251)
T 3orf_A 87 KVDTFVCAAG 96 (251)
T ss_dssp CEEEEEECCC
T ss_pred CCCEEEECCc
Confidence 5787775554
No 221
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=82.88 E-value=1.4 Score=44.08 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=30.5
Q ss_pred CCCccCCCCEEEEEcC---cHHHHHHHHHHHHcCCcEEEEeeCC
Q psy15251 1 MTIASCVLDSILIANR---GEIACRIMRTAKKMGIRVVSVYSDI 41 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~---G~~a~~iira~~~~G~~~v~v~s~~ 41 (720)
|||.....|++||.|+ |.++..+++.+.+.|+++++++.+.
T Consensus 2 ~mm~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 2 SHMGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp ---CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred ccccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 3444334578999996 5899999999999999988886443
No 222
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=82.78 E-value=1.4 Score=45.83 Aligned_cols=40 Identities=10% Similarity=0.176 Sum_probs=31.9
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|+|.....|++||.|+ |.|+..+++.+.+.|++++++..+
T Consensus 1 M~m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 1 MSLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp --CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECC
Confidence 7776656789999985 789999999999999998887543
No 223
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=82.77 E-value=4.2 Score=44.48 Aligned_cols=85 Identities=13% Similarity=0.026 Sum_probs=58.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
-||+.|.+.+..+..+++.++++|.+++.+.+............++.+ + .|...+.+++++.++|.++.+
T Consensus 313 Gkrv~i~~~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~~~~v~-~---------~D~~~le~~i~~~~pDllig~ 382 (458)
T 3pdi_B 313 SARTAIAADPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPLPSVR-V---------GDLEDLEHAARAGQAQLVIGN 382 (458)
T ss_dssp TCEEEEECCHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTTSSCEE-E---------SHHHHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCccCcEE-e---------CCHHHHHHHHHhcCCCEEEEC
Confidence 489999999999999999999999999988664322211111123322 2 355667788889999998854
Q ss_pred CCCCcccHHHHHHHHHCCCeEe
Q psy15251 88 YGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 88 ~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
.- | ....++.|+|++
T Consensus 383 ~~---~----~~~a~k~gip~~ 397 (458)
T 3pdi_B 383 SH---A----LASARRLGVPLL 397 (458)
T ss_dssp TT---H----HHHHHHTTCCEE
T ss_pred hh---H----HHHHHHcCCCEE
Confidence 32 1 245667888876
No 224
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=82.73 E-value=2.5 Score=43.95 Aligned_cols=90 Identities=16% Similarity=0.060 Sum_probs=54.8
Q ss_pred CEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 9 DSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
.||.|+|.|.++...++++++. +++++++++.....+ ..++++. -+ ...|.+.+.++ ...++|+|+..
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~--~~~a~~~-~~-----~~~~~~~~~ll---~~~~~D~V~i~ 74 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESA--QAFANKY-HL-----PKAYDKLEDML---ADESIDVIYVA 74 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTT--CC---CC-CC-----SCEESCHHHHH---TCTTCCEEEEC
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHH--HHHHHHc-CC-----CcccCCHHHHh---cCCCCCEEEEC
Confidence 4899999999999999998876 567777754322221 1222221 11 12456666544 45678988855
Q ss_pred CCCCcccHHHHHHHHHCCCeEeC
Q psy15251 88 YGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 88 ~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
.-. ......+..+.+.|..++.
T Consensus 75 tp~-~~h~~~~~~al~aGk~Vl~ 96 (329)
T 3evn_A 75 TIN-QDHYKVAKAALLAGKHVLV 96 (329)
T ss_dssp SCG-GGHHHHHHHHHHTTCEEEE
T ss_pred CCc-HHHHHHHHHHHHCCCeEEE
Confidence 421 2345667777788877664
No 225
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=82.72 E-value=5.1 Score=40.86 Aligned_cols=74 Identities=8% Similarity=-0.015 Sum_probs=50.6
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 6 CVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 6 ~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
+.+++|||.|+ |.++..+++.+.+.|++|+++........ + .-.+.. .+..|.+.+.++.+..++|+|
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~----l-~~~~~~------~Dl~d~~~~~~~~~~~~~d~v 78 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKL----P-NVEMIS------LDIMDSQRVKKVISDIKPDYI 78 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCC----T-TEEEEE------CCTTCHHHHHHHHHHHCCSEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccc----c-eeeEEE------CCCCCHHHHHHHHHhcCCCEE
Confidence 35679999984 88999999999999999998865443311 1 212221 255677888888877779988
Q ss_pred EeCCCC
Q psy15251 85 HPGYGF 90 (720)
Q Consensus 85 ~pg~g~ 90 (720)
+-..+.
T Consensus 79 ih~A~~ 84 (321)
T 2pk3_A 79 FHLAAK 84 (321)
T ss_dssp EECCSC
T ss_pred EEcCcc
Confidence 865543
No 226
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=82.70 E-value=2.9 Score=43.36 Aligned_cols=93 Identities=17% Similarity=0.051 Sum_probs=62.1
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHH------HcC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAV------RSQ 80 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~------~~~ 80 (720)
|.|+.|+|. |.++...++++++.|.+++++++...... ..+.. + +....|.+.+.+++... ..+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~---~~~~~-~-----~~~~~~~~~~~ll~~~~~l~~~~~~~ 73 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVG---IIDSI-S-----PQSEFFTEFEFFLDHASNLKRDSATA 73 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG---GGGGT-C-----TTCEEESSHHHHHHHHHHHTTSTTTS
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHH---HHHhh-C-----CCCcEECCHHHHHHhhhhhhhccCCC
Confidence 469999998 67999999999999999998874332221 11211 1 12235677887776442 467
Q ss_pred CCEEEeCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 81 CQAIHPGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 81 ~daI~pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
+|+|+...-. .-....+..+.++|..++.
T Consensus 74 vD~V~I~tP~-~~H~~~~~~al~aGkhVl~ 102 (318)
T 3oa2_A 74 LDYVSICSPN-YLHYPHIAAGLRLGCDVIC 102 (318)
T ss_dssp CCEEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred CcEEEECCCc-HHHHHHHHHHHHCCCeEEE
Confidence 9998865432 2346777888888888764
No 227
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=82.68 E-value=2.2 Score=44.19 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=48.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCC------CCccc-cc----c-c-EEEEeCCCCCcccccCHHHHH
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDA------DALHV-KM----A-D-EAYRLEGKSSLDTYLNQAKIL 73 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~------~~~~~-~~----a-D-~~~~i~~~~~~~~~~~~~~i~ 73 (720)
.++|||.| .|.++..+++.+.+.|++++++...... ..... .+ . . +.+. .+..+.+.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-------~D~~~~~~~~ 74 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE-------MDILDQGALQ 74 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEE-------CCTTCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEE-------CCCCCHHHHH
Confidence 46899998 4899999999999999999888543221 00000 00 0 1 2222 2556777777
Q ss_pred HHHHHcCCCEEEeCCC
Q psy15251 74 DIAVRSQCQAIHPGYG 89 (720)
Q Consensus 74 ~~a~~~~~daI~pg~g 89 (720)
+++++.++|+|+-..+
T Consensus 75 ~~~~~~~~d~vih~A~ 90 (348)
T 1ek6_A 75 RLFKKYSFMAVIHFAG 90 (348)
T ss_dssp HHHHHCCEEEEEECCS
T ss_pred HHHHhcCCCEEEECCC
Confidence 7777668888875544
No 228
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=82.57 E-value=1.3 Score=42.39 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=38.7
Q ss_pred EecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCccc
Q psy15251 663 VLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQ 709 (720)
Q Consensus 663 ~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~ 709 (720)
++|++||.|++||.|+.. .+-..+|-+..+|+|.-..+.+|.++.
T Consensus 64 L~V~dG~~V~~G~~laew--Dp~t~pIisE~~G~V~f~dii~G~t~~ 108 (190)
T 2auk_A 64 LAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVRFTDMIDGQTIT 108 (190)
T ss_dssp ESSCTTCEECTTCEEEEC--CSSEEEEECSSCEEEEEESCCBTTTEE
T ss_pred EEecCCCEEcCCCEEEEE--cCcCCcEEeccccEEEEEeccCCcceE
Confidence 689999999999999966 477899999999999988877776554
No 229
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=82.44 E-value=0.88 Score=55.73 Aligned_cols=68 Identities=31% Similarity=0.556 Sum_probs=63.2
Q ss_pred CCCCeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEE-----EEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 647 SDPSKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYV-----ITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 647 ~~~~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~-----i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
.+...|.|||+|+|++|+|++||+|++||+|++||| . |+||.+|+|+++.+++||.|..|++|++|++
T Consensus 1075 ~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~iea-----mK~~~~i~ap~~G~v~~i~v~~G~~V~~g~~l~~i~~ 1147 (1150)
T 3hbl_A 1075 SNPSHIGAQMPGSVTEVKVSVGETVKANQPLLITEA-----MKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIEK 1147 (1150)
T ss_dssp TCSSEEECSSSEEEEEECCCTTCEECTTCEEEEEES-----SSCEEEEECSSSEEEEEECCCTTCEECTTBEEEEEC-
T ss_pred CCCceeecCceEEEEEEEeCCCCEECCCCEEEEEEe-----ccceeEEecCCCeEEEEEEeCCCCEeCCCCEEEEEec
Confidence 456789999999999999999999999999999873 5 8999999999999999999999999999975
No 230
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=82.06 E-value=3 Score=43.36 Aligned_cols=75 Identities=8% Similarity=0.061 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccc-c---------ccEEEEeCCCCCcccccCHHHHHHH
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVK-M---------ADEAYRLEGKSSLDTYLNQAKILDI 75 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~-~---------aD~~~~i~~~~~~~~~~~~~~i~~~ 75 (720)
++++|||.|+ |-++..+++.+.+.|++|+++............ + ..-.+.. .+..|.+.+.++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~Dl~d~~~~~~~ 97 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE------GDIRDLTTCEQV 97 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEE------CCTTCHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEE------ccCCCHHHHHHH
Confidence 3579999995 899999999999999999888654332211100 0 1112221 255677777777
Q ss_pred HHHcCCCEEEeCCC
Q psy15251 76 AVRSQCQAIHPGYG 89 (720)
Q Consensus 76 a~~~~~daI~pg~g 89 (720)
++ ++|+|+-..+
T Consensus 98 ~~--~~d~Vih~A~ 109 (351)
T 3ruf_A 98 MK--GVDHVLHQAA 109 (351)
T ss_dssp TT--TCSEEEECCC
T ss_pred hc--CCCEEEECCc
Confidence 65 7898885544
No 231
>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A
Probab=82.01 E-value=1 Score=47.69 Aligned_cols=60 Identities=7% Similarity=-0.109 Sum_probs=47.5
Q ss_pred eeecCCcceeeE--EecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEE
Q psy15251 651 KVVSPMPGMVDK--VLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKI 717 (720)
Q Consensus 651 ~v~ap~~g~v~~--~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i 717 (720)
.|.+|..|.+.. -.++.|+.|++||+|+.+-. .+|+||.+|.+.-. +.-.|..|+.++.+
T Consensus 265 ~v~a~~~g~~~~~~~~~~~g~~V~~G~~La~i~d----~~v~a~~dG~~i~~---p~p~V~~G~~~~~i 326 (350)
T 2bco_A 265 TIVRLHDDFDFMFDDNVENFTSFVHGEVFGHDGD----KPLMAKNDNEAIVF---PNRHVAIGQRAALM 326 (350)
T ss_dssp EEECCSSSEEESSCTTCCBTEECCTTCEEEEETT----EEEECSSSSCEEES---CCTTCCTTSEEEEE
T ss_pred EEEcCCCCeEEeccccccCCCEeCCCCEEEEECC----EEEEeCCCCEEEEe---cCCCCCCCcEEEEE
Confidence 578998885542 44799999999999999854 78999999986532 26788999977765
No 232
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=82.00 E-value=5.6 Score=40.85 Aligned_cols=78 Identities=14% Similarity=0.194 Sum_probs=50.3
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCc-cc-cc---ccEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy15251 6 CVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADAL-HV-KM---ADEAYRLEGKSSLDTYLNQAKILDIAVRS 79 (720)
Q Consensus 6 ~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~-~~-~~---aD~~~~i~~~~~~~~~~~~~~i~~~a~~~ 79 (720)
.++++|||.|+ |.++..+++.+.+.|++++++......... .. .+ ..-.+.. .+..+.+.+.++++..
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~Dl~d~~~~~~~~~~~ 85 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYED------GDMADACSVQRAVIKA 85 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEE------CCTTCHHHHHHHHHHH
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEE------CCCCCHHHHHHHHHHc
Confidence 36789999985 899999999999999999888654332110 00 00 1111211 2556778888888877
Q ss_pred CCCEEEeCCC
Q psy15251 80 QCQAIHPGYG 89 (720)
Q Consensus 80 ~~daI~pg~g 89 (720)
++|+|+-..+
T Consensus 86 ~~d~Vih~A~ 95 (335)
T 1rpn_A 86 QPQEVYNLAA 95 (335)
T ss_dssp CCSEEEECCS
T ss_pred CCCEEEECcc
Confidence 8898875544
No 233
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=81.87 E-value=1.1 Score=45.32 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=29.9
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.||+||||.|.|.++..+++.+.+.|++++++...
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 35679999999999999999999999999888543
No 234
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=81.87 E-value=9.5 Score=37.83 Aligned_cols=82 Identities=15% Similarity=0.128 Sum_probs=52.8
Q ss_pred CCCccCC--CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHH
Q psy15251 1 MTIASCV--LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAV 77 (720)
Q Consensus 1 m~~~~~~--~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~ 77 (720)
|+....+ -|++||.|+ +.|+..+++.+.+.|.+|++++.+.+...... ......+. -+..|.+.+.++.+
T Consensus 2 M~f~~dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~--~~~~~~~~-----~Dv~~~~~v~~~~~ 74 (242)
T 4b79_A 2 MVFQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR--HPRIRREE-----LDITDSQRLQRLFE 74 (242)
T ss_dssp CCBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC--CTTEEEEE-----CCTTCHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh--cCCeEEEE-----ecCCCHHHHHHHHH
Confidence 5554444 479999985 57999999999999999999876554332211 11222211 24556677777777
Q ss_pred HcC-CCEEEeCCC
Q psy15251 78 RSQ-CQAIHPGYG 89 (720)
Q Consensus 78 ~~~-~daI~pg~g 89 (720)
+.+ +|.++-.-|
T Consensus 75 ~~g~iDiLVNNAG 87 (242)
T 4b79_A 75 ALPRLDVLVNNAG 87 (242)
T ss_dssp HCSCCSEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 765 677664433
No 235
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=81.72 E-value=1.8 Score=45.70 Aligned_cols=90 Identities=10% Similarity=0.002 Sum_probs=54.7
Q ss_pred CEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 9 DSILIANRGEIACR-IMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 9 ~~iLI~~~G~~a~~-iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
-||.|+|.|.++.. .++++++. +++++++++.....+ ..+++.. + ....|.+.+.+ +...++|+|+.
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~--~~~a~~~---~---~~~~~~~~~~l---l~~~~vD~V~i 74 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERA--RRVHRFI---S---DIPVLDNVPAM---LNQVPLDAVVM 74 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHH--GGGGGTS---C---SCCEESSHHHH---HHHSCCSEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHH--HHHHHhc---C---CCcccCCHHHH---hcCCCCCEEEE
Confidence 48999999999986 88999887 788887764321111 1222221 0 11235566554 44568999885
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
..- -......+..+.++|..++.
T Consensus 75 ~tp-~~~H~~~~~~al~aGkhVl~ 97 (359)
T 3m2t_A 75 AGP-PQLHFEMGLLAMSKGVNVFV 97 (359)
T ss_dssp CSC-HHHHHHHHHHHHHTTCEEEE
T ss_pred cCC-cHHHHHHHHHHHHCCCeEEE
Confidence 442 11234556667778877664
No 236
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=81.53 E-value=7.3 Score=39.04 Aligned_cols=71 Identities=10% Similarity=0.029 Sum_probs=47.7
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 10 SILIANR-GEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
||||.|+ |.++..+++.+.+. |++++++..+++........--+.+. .++.|.+.+.++.+ ++|+|+-.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~-------~D~~d~~~l~~~~~--~~d~vi~~ 72 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQ-------LDYFNQESMVEAFK--GMDTVVFI 72 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEE-------CCTTCHHHHHHHTT--TCSEEEEC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEE-------cCCCCHHHHHHHHh--CCCEEEEe
Confidence 5899995 89999999999998 99999986554432211111112232 26677777777664 68988755
Q ss_pred CC
Q psy15251 88 YG 89 (720)
Q Consensus 88 ~g 89 (720)
.+
T Consensus 73 a~ 74 (289)
T 3e48_A 73 PS 74 (289)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 237
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=81.33 E-value=3.7 Score=42.73 Aligned_cols=83 Identities=13% Similarity=0.051 Sum_probs=54.4
Q ss_pred CCEEEEEcCcHHHH-HHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHH-cCCCEE
Q psy15251 8 LDSILIANRGEIAC-RIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVR-SQCQAI 84 (720)
Q Consensus 8 ~~~iLI~~~G~~a~-~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~-~~~daI 84 (720)
+-||.|+|.|.++. ..++++++. +++++++++. +.... ....|.+.+.++ .. .++|+|
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~-~~~~~---------------g~~~~~~~~~ll---~~~~~vD~V 85 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASR-HGTVE---------------GVNSYTTIEAML---DAEPSIDAV 85 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECS-SCCCT---------------TSEEESSHHHHH---HHCTTCCEE
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeC-Chhhc---------------CCCccCCHHHHH---hCCCCCCEE
Confidence 34899999999998 689999886 7888888643 22110 011356666554 34 679998
Q ss_pred EeCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 85 HPGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
+...- .......+..+.++|..++.
T Consensus 86 ~i~tp-~~~H~~~~~~al~aGkhVl~ 110 (330)
T 4ew6_A 86 SLCMP-PQYRYEAAYKALVAGKHVFL 110 (330)
T ss_dssp EECSC-HHHHHHHHHHHHHTTCEEEE
T ss_pred EEeCC-cHHHHHHHHHHHHcCCcEEE
Confidence 85543 12245667777778887763
No 238
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=81.33 E-value=4.6 Score=41.58 Aligned_cols=70 Identities=10% Similarity=0.035 Sum_probs=45.1
Q ss_pred EEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 10 SILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
+|||.|+ |.++..+++.+.+.|++++++...+.........--+.+. .+..|.+.+.++.+ ++|+|+-..
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~-------~Dl~d~~~~~~~~~--~~d~vih~a 85 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRV-------AEMLDHAGLERALR--GLDGVIFSA 85 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEE-------CCTTCHHHHHHHTT--TCSEEEEC-
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEE-------ecCCCHHHHHHHHc--CCCEEEECC
Confidence 8999995 8999999999999999998886543321110000012222 25567777766664 588887443
No 239
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=81.29 E-value=0.88 Score=42.84 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=29.5
Q ss_pred CEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCC
Q psy15251 9 DSILIANRGEIACRIMRTAKKM-GIRVVSVYSDI 41 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~ 41 (720)
++++|+|.|.++..+++.+++. |+++++++.++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4899999999999999999999 99999886544
No 240
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=81.17 E-value=3 Score=40.85 Aligned_cols=69 Identities=13% Similarity=0.102 Sum_probs=47.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc--CCCEE
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS--QCQAI 84 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~--~~daI 84 (720)
||++||.|+ |.++..+++.+.+.|++++++..+.+... .+ ...+..+.+.+.+++++. ++|.|
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~---------~~~D~~~~~~~~~~~~~~~~~~d~v 66 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----AD---------LSTPGGRETAVAAVLDRCGGVLDGL 66 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----CC---------TTSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----cc---------ccCCcccHHHHHHHHHHcCCCccEE
Confidence 478999985 89999999999999999988854432211 00 112444556677777665 79988
Q ss_pred EeCCCC
Q psy15251 85 HPGYGF 90 (720)
Q Consensus 85 ~pg~g~ 90 (720)
+-.-|.
T Consensus 67 i~~Ag~ 72 (255)
T 2dkn_A 67 VCCAGV 72 (255)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 866553
No 241
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=80.82 E-value=2.7 Score=42.01 Aligned_cols=70 Identities=11% Similarity=0.110 Sum_probs=48.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
||+|||.| .|.++..+++.+.+.|+++++++....... . ..-+.+.. +..|.+.+.++++ ++|.|+-
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-~--~~~~~~~~-------Dl~d~~~~~~~~~--~~D~vi~ 70 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-G--PNEECVQC-------DLADANAVNAMVA--GCDGIVH 70 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-C--TTEEEEEC-------CTTCHHHHHHHHT--TCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-C--CCCEEEEc-------CCCCHHHHHHHHc--CCCEEEE
Confidence 47899998 588999999999999999888865443322 0 11122222 4567777777776 6888875
Q ss_pred CCC
Q psy15251 87 GYG 89 (720)
Q Consensus 87 g~g 89 (720)
.-+
T Consensus 71 ~Ag 73 (267)
T 3rft_A 71 LGG 73 (267)
T ss_dssp CCS
T ss_pred CCC
Confidence 544
No 242
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=80.68 E-value=1.4 Score=47.73 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=29.0
Q ss_pred CCccCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 2 TIASCVLDSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 2 ~~~~~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
....+|+++|+|+|+|..++.++..|.+.|++|+++..
T Consensus 16 ~~~~~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~ 53 (430)
T 3ihm_A 16 PRGSHMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTD 53 (430)
T ss_dssp -------CEEEEECCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred cccCcCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcC
Confidence 33445778999999999999999999999999988854
No 243
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=80.60 E-value=1.3 Score=44.18 Aligned_cols=71 Identities=14% Similarity=0.126 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
||++|||.|+ |.++..+++.+.+.|++++++...+.... ......+. -+..+.+.+.++++ ++|+|+
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~-----~Dl~d~~~~~~~~~--~~d~vi 68 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----EAHEEIVA-----CDLADAQAVHDLVK--DCDGII 68 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----CTTEEECC-----CCTTCHHHHHHHHT--TCSEEE
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----CCCccEEE-----ccCCCHHHHHHHHc--CCCEEE
Confidence 3579999996 89999999999999999888754433211 01111121 25566777777665 588887
Q ss_pred eCCC
Q psy15251 86 PGYG 89 (720)
Q Consensus 86 pg~g 89 (720)
-..+
T Consensus 69 ~~a~ 72 (267)
T 3ay3_A 69 HLGG 72 (267)
T ss_dssp ECCS
T ss_pred ECCc
Confidence 5544
No 244
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=80.30 E-value=0.34 Score=52.72 Aligned_cols=35 Identities=26% Similarity=0.435 Sum_probs=0.0
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEEeee
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMK 684 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamk 684 (720)
..|.||..|+|.+++|++||.|..||+|++|+...
T Consensus 46 ~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~~~ 80 (428)
T 3dva_I 46 VEIPSPVKGKVLEILVPEGTVATVGQTLITLDAPG 80 (428)
T ss_dssp -----------------------------------
T ss_pred EEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecCC
Confidence 46999999999999999999999999999998643
No 245
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=80.14 E-value=6.3 Score=38.22 Aligned_cols=69 Identities=14% Similarity=0.084 Sum_probs=46.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc----CCC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS----QCQ 82 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~----~~d 82 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+.. .. .. ..+.. +..+.+.+.+++++. ++|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--~~--~~--~~~~~-------D~~~~~~~~~~~~~~~~~~~~d 68 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--GE--DL--IYVEG-------DVTREEDVRRAVARAQEEAPLF 68 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--SS--SS--EEEEC-------CTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--cc--ce--EEEeC-------CCCCHHHHHHHHHHHHhhCCce
Confidence 478999984 78999999999999999988865443 11 11 23332 445666666555543 678
Q ss_pred EEEeCCC
Q psy15251 83 AIHPGYG 89 (720)
Q Consensus 83 aI~pg~g 89 (720)
.++-..|
T Consensus 69 ~li~~ag 75 (242)
T 1uay_A 69 AVVSAAG 75 (242)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 8775544
No 246
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=79.88 E-value=1.8 Score=44.02 Aligned_cols=39 Identities=13% Similarity=0.090 Sum_probs=30.4
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEee
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s 39 (720)
|+|.....|++||.|+ +.++..+++.+.+.|+++++++.
T Consensus 1 M~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r 40 (280)
T 3tox_A 1 MVMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTAR 40 (280)
T ss_dssp ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCS
T ss_pred CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 7776666789999985 68999999999999999887743
No 247
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=79.79 E-value=3 Score=41.23 Aligned_cols=40 Identities=15% Similarity=0.157 Sum_probs=31.4
Q ss_pred CCCccC--CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 1 MTIASC--VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 1 m~~~~~--~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|+|... ..|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 4 ~~~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 4 MYMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CTTGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 555432 2478999985 789999999999999998888543
No 248
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=79.67 E-value=2.5 Score=44.68 Aligned_cols=87 Identities=7% Similarity=-0.095 Sum_probs=55.2
Q ss_pred CEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 9 DSILIANRGEIACR-IMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 9 ~~iLI~~~G~~a~~-iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
-||.|+|.|.++.. .++.+++. +++++++++. +... .+... + ....|.+.+.++ ...++|+|+.
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~-~~~~----~~~~~---~---~~~~~~~~~~ll---~~~~vD~V~i 71 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVER-SKEL----SKERY---P---QASIVRSFKELT---EDPEIDLIVV 71 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECS-SCCG----GGTTC---T---TSEEESCSHHHH---TCTTCCEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC-CHHH----HHHhC---C---CCceECCHHHHh---cCCCCCEEEE
Confidence 48999999999987 67888776 8888888643 2221 11110 0 112345655544 4567999886
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
..-. ......+..+.++|..++.
T Consensus 72 ~tp~-~~H~~~~~~al~aGkhVl~ 94 (362)
T 3fhl_A 72 NTPD-NTHYEYAGMALEAGKNVVV 94 (362)
T ss_dssp CSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred eCCh-HHHHHHHHHHHHCCCeEEE
Confidence 5432 2346677778888887764
No 249
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=79.62 E-value=3.1 Score=40.77 Aligned_cols=81 Identities=12% Similarity=-0.002 Sum_probs=51.1
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCccc-cc-ccEEEEeCCCCCcccccCHHHHHHHHH
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHV-KM-ADEAYRLEGKSSLDTYLNQAKILDIAV 77 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~-~~-aD~~~~i~~~~~~~~~~~~~~i~~~a~ 77 (720)
|+|+. ..|++||.|+ |.++..+++.+.+.|++++++..+.+...... .+ ..+.+. -+..+.+.+.++++
T Consensus 1 M~~~l-~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------~D~~~~~~~~~~~~ 72 (244)
T 3d3w_A 1 MELFL-AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVC-------VDLGDWEATERALG 72 (244)
T ss_dssp CCCCC-TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEE-------CCTTCHHHHHHHHT
T ss_pred Ccccc-CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEE-------EeCCCHHHHHHHHH
Confidence 66643 3578999986 78999999999999999888754322110000 00 112222 25567777777776
Q ss_pred Hc-CCCEEEeCCC
Q psy15251 78 RS-QCQAIHPGYG 89 (720)
Q Consensus 78 ~~-~~daI~pg~g 89 (720)
+. ++|.++-.-|
T Consensus 73 ~~~~id~vi~~Ag 85 (244)
T 3d3w_A 73 SVGPVDLLVNNAA 85 (244)
T ss_dssp TCCCCCEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 54 4788876554
No 250
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=79.46 E-value=5.4 Score=41.66 Aligned_cols=74 Identities=11% Similarity=0.069 Sum_probs=46.9
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHH--cCCcEEEEeeCCCCC----------Cccccccc---EEEEeCCCCCcccccCHHH
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKK--MGIRVVSVYSDIDAD----------ALHVKMAD---EAYRLEGKSSLDTYLNQAK 71 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~--~G~~~v~v~s~~d~~----------~~~~~~aD---~~~~i~~~~~~~~~~~~~~ 71 (720)
+++|||.| .|.++..+++.+.+ .|++|++++...... ........ ..+. .+..+.+.
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~Dl~d~~~ 82 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIA-------ADINNPLD 82 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEE-------CCTTCHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEE-------CCCCCHHH
Confidence 57899997 58999999999999 999999986433210 00011111 2232 25566666
Q ss_pred HHHHHHHcCCCEEEeCCC
Q psy15251 72 ILDIAVRSQCQAIHPGYG 89 (720)
Q Consensus 72 i~~~a~~~~~daI~pg~g 89 (720)
+.++ ...++|+|+-.-+
T Consensus 83 ~~~~-~~~~~D~vih~A~ 99 (362)
T 3sxp_A 83 LRRL-EKLHFDYLFHQAA 99 (362)
T ss_dssp HHHH-TTSCCSEEEECCC
T ss_pred HHHh-hccCCCEEEECCc
Confidence 6655 4467898875444
No 251
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=78.86 E-value=0.35 Score=51.03 Aligned_cols=46 Identities=20% Similarity=0.223 Sum_probs=32.0
Q ss_pred ecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEE----------------------------EEEcCCCCcccCCCeEE
Q psy15251 664 LVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIE----------------------------EIFYAAGQSIQKNQNLV 715 (720)
Q Consensus 664 ~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~----------------------------~~~~~~g~~v~~g~~l~ 715 (720)
.|++|+.|++||+|+ -+..|-|..+|+|. ++++++||.|.+|++|+
T Consensus 124 ~v~~g~~v~~G~vla------k~~aiiaeidG~V~fg~~kr~i~i~~~~g~~~eylip~~~~k~~~v~~Gd~V~~G~~l~ 197 (352)
T 2xhc_A 124 GLRVGTKVKQGLPLS------KNEEYICELDGKIVEIERMKKVVVQTPDGEQDVYYIPLDVFDRDRIKKGKEVKQGEMLA 197 (352)
T ss_dssp TCCTTCEECTTCBSB------SSSSCBCCSCEEEEEEEEEEEEEEECTTSCEEEEEEEGGGCCTTTSCTTCEECTTCEEE
T ss_pred ecCCCCEEccCcEEe------cCceEEeccceEEEECCcEEEEEEECCCCCEEEEEEcCCCCcCeeeCCCCEEeCCCCcc
Confidence 489999999999887 23334444444443 22377899999999987
No 252
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=78.68 E-value=2.4 Score=42.21 Aligned_cols=83 Identities=10% Similarity=0.136 Sum_probs=47.7
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-----cccccEEEEeCCCCCcccccCHHHHHH
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALH-----VKMADEAYRLEGKSSLDTYLNQAKILD 74 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-----~~~aD~~~~i~~~~~~~~~~~~~~i~~ 74 (720)
|.|.. ++|++||.|+ +.++..+++.+.+.|+++++++......... .........+. -+..+.+.+.+
T Consensus 1 M~~~~-~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~~~~~v~~ 74 (264)
T 3i4f_A 1 MSLGR-FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ-----ADVTKKEDLHK 74 (264)
T ss_dssp ------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEE-----CCTTSHHHHHH
T ss_pred CCccc-ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEE-----ecCCCHHHHHH
Confidence 55544 5689999985 6899999999999999998885432211000 00011122111 14456666666
Q ss_pred HHHHc-----CCCEEEeCCC
Q psy15251 75 IAVRS-----QCQAIHPGYG 89 (720)
Q Consensus 75 ~a~~~-----~~daI~pg~g 89 (720)
++++. ++|.++-.-|
T Consensus 75 ~~~~~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 75 IVEEAMSHFGKIDFLINNAG 94 (264)
T ss_dssp HHHHHHHHHSCCCEEECCCC
T ss_pred HHHHHHHHhCCCCEEEECCc
Confidence 55544 7898885555
No 253
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=78.57 E-value=2.8 Score=41.74 Aligned_cols=40 Identities=10% Similarity=0.106 Sum_probs=31.3
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|+|.....|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 1 M~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 1 MVMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp ---CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 7776656789999985 689999999999999998888543
No 254
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=78.54 E-value=6 Score=41.01 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=31.5
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCC
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADA 45 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~ 45 (720)
||++.|..+.|+..++++.+.|+++++|.+.+|.+.
T Consensus 9 rivf~Gt~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~ 44 (318)
T 3q0i_A 9 RIVFAGTPDFAARHLAALLSSEHEIIAVYTQPERPA 44 (318)
T ss_dssp EEEEECCSHHHHHHHHHHHTSSSEEEEEECCCC---
T ss_pred EEEEEecCHHHHHHHHHHHHCCCcEEEEEcCCCCcc
Confidence 899999999999999999999999999999887654
No 255
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=78.51 E-value=2.9 Score=45.95 Aligned_cols=91 Identities=11% Similarity=0.128 Sum_probs=54.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCccccccc----EEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMAD----EAYRLEGKSSLDTYLNQAKILDIAVRSQC 81 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD----~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 81 (720)
++++|||+|.|.++..+++.+.+. |++++++..+.+.. ..+++ ..+.+ +..+.+.+.++++ ++
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka---~~la~~~~~~~~~~-------D~~d~~~l~~~l~--~~ 89 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANA---QALAKPSGSKAISL-------DVTDDSALDKVLA--DN 89 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHH---HHHHGGGTCEEEEC-------CTTCHHHHHHHHH--TS
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHH---HHHHHhcCCcEEEE-------ecCCHHHHHHHHc--CC
Confidence 467999999999999999999998 77766554322111 11111 12222 3455666666554 68
Q ss_pred CEEEeCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 82 QAIHPGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 82 daI~pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
|+|+-..+... ...+...|.+.|..++-
T Consensus 90 DvVIn~tp~~~-~~~v~~a~l~~g~~vvd 117 (467)
T 2axq_A 90 DVVISLIPYTF-HPNVVKSAIRTKTDVVT 117 (467)
T ss_dssp SEEEECSCGGG-HHHHHHHHHHHTCEEEE
T ss_pred CEEEECCchhh-hHHHHHHHHhcCCEEEE
Confidence 88886655321 23455566666666554
No 256
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=78.49 E-value=2.1 Score=43.72 Aligned_cols=36 Identities=22% Similarity=0.184 Sum_probs=29.9
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCC
Q psy15251 6 CVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDI 41 (720)
Q Consensus 6 ~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~ 41 (720)
.|+++|||.|+ |.++..+++.+.+.|++++++....
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence 35679999997 8999999999999999998885433
No 257
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=78.45 E-value=1.3 Score=46.89 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=56.9
Q ss_pred CCCccCCCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy15251 1 MTIASCVLDSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS 79 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~ 79 (720)
|+|. +-||.|+|.|.++...++.+++. +++++++++. +.... ..+.+ .....|.+.+.++ ...
T Consensus 1 M~m~---~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~-~~~~~--~~a~~-------~g~~~~~~~~~ll---~~~ 64 (359)
T 3e18_A 1 MSLK---KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI-LAEKR--EAAAQ-------KGLKIYESYEAVL---ADE 64 (359)
T ss_dssp --CC---CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS-SHHHH--HHHHT-------TTCCBCSCHHHHH---HCT
T ss_pred CCCC---cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC-CHHHH--HHHHh-------cCCceeCCHHHHh---cCC
Confidence 5553 24899999999999999999987 7888887542 21111 11211 0112456666544 456
Q ss_pred CCCEEEeCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 80 QCQAIHPGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 80 ~~daI~pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
++|+|+...-. ......+..+.++|..++.
T Consensus 65 ~~D~V~i~tp~-~~h~~~~~~al~aGkhVl~ 94 (359)
T 3e18_A 65 KVDAVLIATPN-DSHKELAISALEAGKHVVC 94 (359)
T ss_dssp TCCEEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEcCCc-HHHHHHHHHHHHCCCCEEe
Confidence 78988865431 2345667777778877654
No 258
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=78.06 E-value=4.3 Score=39.91 Aligned_cols=75 Identities=12% Similarity=0.096 Sum_probs=46.0
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-ccc-cc--EEEEeCCCCCcccccCHHHHHHHHHH----
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALH-VKM-AD--EAYRLEGKSSLDTYLNQAKILDIAVR---- 78 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-~~~-aD--~~~~i~~~~~~~~~~~~~~i~~~a~~---- 78 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+.+..... ..+ .+ ..+.. +..+.+.+.+++++
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVA-------DVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEE-------ecCCHHHHHHHHHHHHhh
Confidence 378999985 7899999999999999988885432211000 000 11 22222 44566666555544
Q ss_pred cCCCEEEeCCC
Q psy15251 79 SQCQAIHPGYG 89 (720)
Q Consensus 79 ~~~daI~pg~g 89 (720)
.++|.++-.-|
T Consensus 84 ~~id~li~~Ag 94 (254)
T 2wsb_A 84 APVSILVNSAG 94 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCc
Confidence 36898876554
No 259
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=78.03 E-value=2.3 Score=44.74 Aligned_cols=91 Identities=9% Similarity=0.021 Sum_probs=54.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHc--CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKM--GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~--G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
++.||.|+|.|.++...++.+++. +++++++++. +.... ..++++. -+ ..|.+.+.+ +...++|+|
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~-~~~~~-~~~~~~~-~~------~~~~~~~~l---l~~~~~D~V 79 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDI-DPAAL-KAAVERT-GA------RGHASLTDM---LAQTDADIV 79 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS-SHHHH-HHHHHHH-CC------EEESCHHHH---HHHCCCSEE
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC-CHHHH-HHHHHHc-CC------ceeCCHHHH---hcCCCCCEE
Confidence 346899999999999999999987 7888877532 21110 1111110 00 134555544 445678888
Q ss_pred EeCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 85 HPGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
+...-. ......+..+.+.|..++.
T Consensus 80 ~i~tp~-~~h~~~~~~al~~gk~v~~ 104 (354)
T 3q2i_A 80 ILTTPS-GLHPTQSIECSEAGFHVMT 104 (354)
T ss_dssp EECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred EECCCc-HHHHHHHHHHHHCCCCEEE
Confidence 754421 1234556666667776653
No 260
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=77.97 E-value=5.4 Score=41.27 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=31.6
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCC
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADA 45 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~ 45 (720)
||++.|..+.|+..++++.+.|+++++|.+.+|.+.
T Consensus 4 rivf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~~ 39 (314)
T 3tqq_A 4 KIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRPS 39 (314)
T ss_dssp EEEEEECSGGGHHHHHHHHHSSSEEEEEECCCC---
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCCCcc
Confidence 999999999999999999999999999999887654
No 261
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=77.92 E-value=0.45 Score=47.13 Aligned_cols=33 Identities=21% Similarity=0.447 Sum_probs=0.0
Q ss_pred CeeecCCcceeeEEecCCCCe-eeCCCeEEEEEe
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQA-VKTGDPIMVIIA 682 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~-V~~g~~l~~~ea 682 (720)
..|.||..|+|.+++|++||. |..|++|++|+.
T Consensus 47 ~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~~ 80 (229)
T 1zy8_K 47 VTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVE 80 (229)
T ss_dssp ----------------------------------
T ss_pred eEEecCCCeEEEEEEecCCCeeecCCCEEEEEec
Confidence 468999999999999999997 999999999973
No 262
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=77.87 E-value=3.4 Score=45.12 Aligned_cols=92 Identities=11% Similarity=0.113 Sum_probs=52.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-ccccc-EEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALH-VKMAD-EAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-~~~aD-~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
+++|||+|.|.++..+++.+.+.|++++++..+.+..... ..+.. ..+.+ +..+.+.+.+++. ++|+|+
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~-------Dv~d~~~l~~~l~--~~DvVI 73 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISL-------DVNDDAALDAEVA--KHDLVI 73 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEEC-------CTTCHHHHHHHHT--TSSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEe-------ecCCHHHHHHHHc--CCcEEE
Confidence 4689999999999999999999999876664332111000 00111 12221 3445556655553 789888
Q ss_pred eCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 86 PGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
-..+... ...++..+.+.|..++
T Consensus 74 n~a~~~~-~~~i~~a~l~~g~~vv 96 (450)
T 1ff9_A 74 SLIPYTF-HATVIKSAIRQKKHVV 96 (450)
T ss_dssp ECCC--C-HHHHHHHHHHHTCEEE
T ss_pred ECCcccc-chHHHHHHHhCCCeEE
Confidence 6654311 2334444555555554
No 263
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=77.51 E-value=4.1 Score=45.04 Aligned_cols=89 Identities=9% Similarity=0.113 Sum_probs=53.9
Q ss_pred CCCEEEEEcCcHHHHH-HHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANRGEIACR-IMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~-iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
.+|+|+|+|-|.++.. +++.++++|++|.+.+..........+...-.+.++. +.+.+ .++|.|+
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~--------~~~~~------~~~d~vV 86 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHH--------RPENV------LDASVVV 86 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSC--------CGGGG------TTCSEEE
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCC--------CHHHc------CCCCEEE
Confidence 3689999999999985 8999999999987764332211111111122233321 11111 2588888
Q ss_pred eCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 86 PGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
...|.-..++.+.. +.+.|+++++
T Consensus 87 ~Spgi~~~~p~~~~-a~~~gi~v~~ 110 (494)
T 4hv4_A 87 VSTAISADNPEIVA-AREARIPVIR 110 (494)
T ss_dssp ECTTSCTTCHHHHH-HHHTTCCEEE
T ss_pred ECCCCCCCCHHHHH-HHHCCCCEEc
Confidence 77765555666544 5677999873
No 264
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=77.49 E-value=5.8 Score=41.17 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccc-c---------ccEEEEeCCCCCcccccCHHHHHHH
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVK-M---------ADEAYRLEGKSSLDTYLNQAKILDI 75 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~-~---------aD~~~~i~~~~~~~~~~~~~~i~~~ 75 (720)
++++|||.|+ |.++..+++.+.+.|++++++............ + ..-.+.. .+..+.+.+.++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~Dl~d~~~~~~~ 99 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ------GDIRNLDDCNNA 99 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEE------CCTTSHHHHHHH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEE------CCCCCHHHHHHH
Confidence 3568999996 899999999999999999888543321110000 0 1111211 245566777666
Q ss_pred HHHcCCCEEEeCCC
Q psy15251 76 AVRSQCQAIHPGYG 89 (720)
Q Consensus 76 a~~~~~daI~pg~g 89 (720)
++ ++|+|+-..+
T Consensus 100 ~~--~~d~vih~A~ 111 (352)
T 1sb8_A 100 CA--GVDYVLHQAA 111 (352)
T ss_dssp HT--TCSEEEECCS
T ss_pred hc--CCCEEEECCc
Confidence 65 7898876554
No 265
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=77.44 E-value=3.9 Score=40.81 Aligned_cols=120 Identities=18% Similarity=0.266 Sum_probs=61.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCc-EEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCE-EE
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIR-VVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQA-IH 85 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~-~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~da-I~ 85 (720)
.++|||+|.|.++..+++.+.+.|+. +++++ .|.-.. +.+.-+.+.-.. .-...-.+.+.+.+++.+.+. |.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD--~d~v~~-sNl~Rq~l~~~~---diG~~Ka~~~~~~l~~~np~~~v~ 104 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLD--FDTVSL-SNLQRQTLHSDA---TVGQPKVESARDALTRINPHIAIT 104 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEEC--CCBCCG-GGGGTCTTCCGG---GTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEc--CCCccc-ccCCcccccChh---hcCcHHHHHHHHHHHHHCCCcEEE
Confidence 36899999999999999999999995 44553 232111 001100000000 000012344555555554432 22
Q ss_pred eCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCc
Q psy15251 86 PGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPG 139 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~ 139 (720)
+-...+.+ ..+...+....+.+...+... .+....+.+.+.|+|..-+
T Consensus 105 ~~~~~~~~-~~~~~~~~~~DvVi~~~d~~~-----~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 105 PVNALLDD-AELAALIAEHDLVLDCTDNVA-----VRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp EECSCCCH-HHHHHHHHTSSEEEECCSSHH-----HHHHHHHHHHHHTCCEEEE
T ss_pred EEeccCCH-hHHHHHHhCCCEEEEeCCCHH-----HHHHHHHHHHHcCCCEEEe
Confidence 21222322 233455666666665433222 2445666777788876553
No 266
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=77.08 E-value=3.4 Score=41.76 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=28.4
Q ss_pred CCEEEEEcC---cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR---GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~---G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~ 56 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYAT 56 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 478999996 589999999999999998888644
No 267
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=76.98 E-value=8.3 Score=40.00 Aligned_cols=75 Identities=13% Similarity=0.038 Sum_probs=50.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCCCCccccc---cc--EEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKM---AD--EAYRLEGKSSLDTYLNQAKILDIAVRSQC 81 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~---aD--~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 81 (720)
.++|||.| .|.++..+++.+.+.|++++++............. .+ +.+. .+..+.+.+.++++..++
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------~Dl~d~~~~~~~~~~~~~ 81 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEI-------GDIRDQNKLLESIREFQP 81 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEE-------CCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEE-------ccccCHHHHHHHHHhcCC
Confidence 35899999 58999999999999999998886544322111100 01 2222 255677788888877789
Q ss_pred CEEEeCCC
Q psy15251 82 QAIHPGYG 89 (720)
Q Consensus 82 daI~pg~g 89 (720)
|+|+-..+
T Consensus 82 d~vih~A~ 89 (357)
T 1rkx_A 82 EIVFHMAA 89 (357)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 98885544
No 268
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=76.92 E-value=6 Score=40.75 Aligned_cols=74 Identities=14% Similarity=0.091 Sum_probs=48.6
Q ss_pred CEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCCCCc--cccc--cc--EEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy15251 9 DSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDADAL--HVKM--AD--EAYRLEGKSSLDTYLNQAKILDIAVRSQC 81 (720)
Q Consensus 9 ~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~~~~--~~~~--aD--~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 81 (720)
++|||.| .|.++..+++.+.+.|++|++++........ ...+ .. +.+. .+..|.+.+.++.+..++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~-------~Dl~d~~~~~~~~~~~~~ 74 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVH-------GDIRNKNDVTRLITKYMP 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEE-------CCTTCHHHHHHHHHHHCC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEE-------cCCCCHHHHHHHHhccCC
Confidence 5899999 5899999999999999999888532211110 0000 01 1222 255677778788777778
Q ss_pred CEEEeCCC
Q psy15251 82 QAIHPGYG 89 (720)
Q Consensus 82 daI~pg~g 89 (720)
|+|+-..+
T Consensus 75 d~vih~A~ 82 (347)
T 1orr_A 75 DSCFHLAG 82 (347)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 98885554
No 269
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=76.88 E-value=5.3 Score=41.49 Aligned_cols=91 Identities=11% Similarity=0.028 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCcHHHHH-HHHHHHHcCCcEEEEeeCCCCCCc-ccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCE
Q psy15251 6 CVLDSILIANRGEIACR-IMRTAKKMGIRVVSVYSDIDADAL-HVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQA 83 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~-iira~~~~G~~~v~v~s~~d~~~~-~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~da 83 (720)
+.+++|+++|-|.++.. +++-++++|++|.+.+........ ..+...-.+..+. +.+.+.+ .++|.
T Consensus 2 ~~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~--------~~~~l~~----~~~d~ 69 (326)
T 3eag_A 2 NAMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGF--------DAAQLDE----FKADV 69 (326)
T ss_dssp -CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESC--------CGGGGGS----CCCSE
T ss_pred CCCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCC--------CHHHcCC----CCCCE
Confidence 34689999999999995 899999999998877544322110 1111122233321 1111100 34777
Q ss_pred EEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 84 IHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 84 I~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
|+...|.-..++.+.. +.+.|++++
T Consensus 70 vV~Spgi~~~~p~~~~-a~~~gi~v~ 94 (326)
T 3eag_A 70 YVIGNVAKRGMDVVEA-ILNLGLPYI 94 (326)
T ss_dssp EEECTTCCTTCHHHHH-HHHTTCCEE
T ss_pred EEECCCcCCCCHHHHH-HHHcCCcEE
Confidence 7766554444555443 456677766
No 270
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=76.70 E-value=7.1 Score=38.63 Aligned_cols=74 Identities=7% Similarity=0.078 Sum_probs=46.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCccc-ccccEEEEeCCCCCcccccCHHHHHHHHHHc-----C
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHV-KMADEAYRLEGKSSLDTYLNQAKILDIAVRS-----Q 80 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~-~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~ 80 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+.+. .... .+....+.. +..+.+.+.+++++. +
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQV-------DLEDERERVRFVEEAAYALGR 77 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEEC-------CTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEe-------eCCCHHHHHHHHHHHHHHcCC
Confidence 478999985 789999999999999998888654432 1100 011133332 445555555544432 6
Q ss_pred CCEEEeCCC
Q psy15251 81 CQAIHPGYG 89 (720)
Q Consensus 81 ~daI~pg~g 89 (720)
+|.++-.-|
T Consensus 78 iD~lv~~Ag 86 (256)
T 2d1y_A 78 VDVLVNNAA 86 (256)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 898875544
No 271
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=76.61 E-value=12 Score=37.02 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=45.5
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc-----C
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS-----Q 80 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~ 80 (720)
+.|++||.|+ |.++..+++.+.+.|++++++..+.+.... -..+.. +..|.+.+.+++++. +
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~-------Dl~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-----FLAVKC-------DITDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----SEEEEC-------CTTSHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-----ceEEEe-------cCCCHHHHHHHHHHHHHHcCC
Confidence 3578999985 789999999999999999888654432211 122222 344555555544432 4
Q ss_pred CCEEEeCCC
Q psy15251 81 CQAIHPGYG 89 (720)
Q Consensus 81 ~daI~pg~g 89 (720)
+|.++-.-|
T Consensus 88 iD~lv~nAg 96 (253)
T 2nm0_A 88 VEVLIANAG 96 (253)
T ss_dssp CSEEEEECS
T ss_pred CCEEEECCC
Confidence 788775444
No 272
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=76.59 E-value=7.1 Score=40.71 Aligned_cols=77 Identities=9% Similarity=-0.039 Sum_probs=47.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCC--Ccccccc-------cEEEEeCCCCCcccccCHHHHHHHHH
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDAD--ALHVKMA-------DEAYRLEGKSSLDTYLNQAKILDIAV 77 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~--~~~~~~a-------D~~~~i~~~~~~~~~~~~~~i~~~a~ 77 (720)
|++|||.|+ |.++..+++.+.+.|++++++....... .....+. .....+ ..+..+.+.+.++++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~ 75 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH-----YGDLSDTSNLTRILR 75 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEEC-----CCCSSCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEE-----ECCCCCHHHHHHHHH
Confidence 468999984 8999999999999999988885433211 0000110 111111 125567778888887
Q ss_pred HcCCCEEEeCCC
Q psy15251 78 RSQCQAIHPGYG 89 (720)
Q Consensus 78 ~~~~daI~pg~g 89 (720)
..++|.|+-.-+
T Consensus 76 ~~~~d~vih~A~ 87 (372)
T 1db3_A 76 EVQPDEVYNLGA 87 (372)
T ss_dssp HHCCSEEEECCC
T ss_pred hcCCCEEEECCc
Confidence 778898875443
No 273
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=76.40 E-value=4.1 Score=41.60 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=45.8
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 9 DSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 9 ~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
++|||.|+ |.++..+++.+.+.|++++++.... ..+..+.+.+.++++..++|+|+-.
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~~~d~vih~ 62 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASERIDQVYLA 62 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhcCCCEEEEc
Confidence 58999995 8999999999999999977763211 0144567778888877789988865
Q ss_pred CCC
Q psy15251 88 YGF 90 (720)
Q Consensus 88 ~g~ 90 (720)
.+.
T Consensus 63 a~~ 65 (321)
T 1e6u_A 63 AAK 65 (321)
T ss_dssp CCC
T ss_pred Cee
Confidence 543
No 274
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=76.32 E-value=2.2 Score=43.78 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=32.2
Q ss_pred CCCccCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 1 MTIASCVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|..++.+..+|+|+|+|..++.++..+++.|++++++...
T Consensus 1 m~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 1 MTAPTAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp -CCCCCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 5444444568999999999999999999999999888543
No 275
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=76.27 E-value=2.7 Score=41.90 Aligned_cols=34 Identities=18% Similarity=0.197 Sum_probs=28.9
Q ss_pred CCCEEEEEcC---cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR---GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~---G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 4578999996 589999999999999998887543
No 276
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=76.19 E-value=9.7 Score=37.84 Aligned_cols=73 Identities=14% Similarity=0.111 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc-----C
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS-----Q 80 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~ 80 (720)
+.|++||.|+ |.++..+++.+.+.|+++++++.+....... .-..+.. +..+.+.+.+++++. +
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~-------Dv~d~~~v~~~~~~~~~~~g~ 96 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---DIHTVAG-------DISKPETADRIVREGIERFGR 96 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---TEEEEES-------CTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---ceEEEEc-------cCCCHHHHHHHHHHHHHHCCC
Confidence 4578999985 7899999999999999998886544322111 1122221 445666665555443 7
Q ss_pred CCEEEeCCC
Q psy15251 81 CQAIHPGYG 89 (720)
Q Consensus 81 ~daI~pg~g 89 (720)
+|.++-.-|
T Consensus 97 iD~lv~nAg 105 (260)
T 3un1_A 97 IDSLVNNAG 105 (260)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 998886554
No 277
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=76.19 E-value=4.8 Score=39.99 Aligned_cols=75 Identities=15% Similarity=0.124 Sum_probs=45.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-cccc-c-EEEEeCCCCCcccccCHHHHHHHHHHc----
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALH-VKMA-D-EAYRLEGKSSLDTYLNQAKILDIAVRS---- 79 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-~~~a-D-~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 79 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+.+..... ..+. . ..+.. +..|.+.+.+++++.
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEV-------DVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEE-------eCCCHHHHHHHHHHHHHHc
Confidence 378999984 7899999999999999988875432211000 0010 1 12222 445556555555433
Q ss_pred -CCCEEEeCCC
Q psy15251 80 -QCQAIHPGYG 89 (720)
Q Consensus 80 -~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 85 g~iD~lv~~Ag 95 (263)
T 3ak4_A 85 GGFDLLCANAG 95 (263)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 6898876554
No 278
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=76.16 E-value=2 Score=41.82 Aligned_cols=91 Identities=10% Similarity=0.076 Sum_probs=56.9
Q ss_pred CCCEEEEEcCcHHHHHHHHH--HHHcCCcEEEEeeCCCCCCccc-ccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCE
Q psy15251 7 VLDSILIANRGEIACRIMRT--AKKMGIRVVSVYSDIDADALHV-KMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQA 83 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira--~~~~G~~~v~v~s~~d~~~~~~-~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~da 83 (720)
..++++|+|.|..+..+++. .++.|++++++..+........ ....--+ ...+.+.+++++.++|.
T Consensus 83 ~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV-----------~~~~dL~~~v~~~~Id~ 151 (212)
T 3keo_A 83 STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPV-----------YGISTINDHLIDSDIET 151 (212)
T ss_dssp SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBE-----------EEGGGHHHHC-CCSCCE
T ss_pred CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEE-----------eCHHHHHHHHHHcCCCE
Confidence 45799999999999999998 4567999998864332202112 2222111 12356778888999998
Q ss_pred EEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 84 IHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 84 I~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
++-..-.. .....++.|.++|+.-+
T Consensus 152 vIIAvPs~-~aq~v~d~lv~~GIk~I 176 (212)
T 3keo_A 152 AILTVPST-EAQEVADILVKAGIKGI 176 (212)
T ss_dssp EEECSCGG-GHHHHHHHHHHHTCCEE
T ss_pred EEEecCch-hHHHHHHHHHHcCCCEE
Confidence 77554221 22356777777776643
No 279
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=76.13 E-value=6.6 Score=38.52 Aligned_cols=78 Identities=12% Similarity=0.029 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC-CCCCCccc-cc---ccEEEEeCCCCCcccccCHHHHHHHHHHc-
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD-IDADALHV-KM---ADEAYRLEGKSSLDTYLNQAKILDIAVRS- 79 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~-~d~~~~~~-~~---aD~~~~i~~~~~~~~~~~~~~i~~~a~~~- 79 (720)
..|++||.|+ |.++..+++.+.+.|+++++++.+ .+...... .+ ......+. -+..+.+.+.+++++.
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~ 80 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA-----ADLATSEACQQLVDEFV 80 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEE-----CCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEE-----CCCCCHHHHHHHHHHHH
Confidence 4578999985 789999999999999998888654 22111000 00 11222221 1445666665555443
Q ss_pred ----CCCEEEeCCC
Q psy15251 80 ----QCQAIHPGYG 89 (720)
Q Consensus 80 ----~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 81 ~~~g~id~vi~~Ag 94 (258)
T 3afn_B 81 AKFGGIDVLINNAG 94 (258)
T ss_dssp HHHSSCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 6898886554
No 280
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=76.01 E-value=1.5 Score=43.17 Aligned_cols=89 Identities=9% Similarity=0.029 Sum_probs=51.0
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
..++++|+|.|.++..+++.+.+.|+ ++++..+++.... .. .+..+..+ +..+.+.+.+ +.-.++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~-~~-~~~~~i~g------d~~~~~~l~~-a~i~~ad~vi~ 77 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKV-LR-SGANFVHG------DPTRVSDLEK-ANVRGARAVIV 77 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHH-HH-TTCEEEES------CTTCHHHHHH-TTCTTCSEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHH-Hh-cCCeEEEc------CCCCHHHHHh-cCcchhcEEEE
Confidence 35689999999999999999999999 8888544332111 11 12222222 3345443333 33346888886
Q ss_pred CCCCCcccHHHHHHHHHCC
Q psy15251 87 GYGFLSENAEFANAVEGNR 105 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~g 105 (720)
..+.-..|...+..+.+.+
T Consensus 78 ~~~~d~~n~~~~~~a~~~~ 96 (234)
T 2aef_A 78 DLESDSETIHCILGIRKID 96 (234)
T ss_dssp CCSCHHHHHHHHHHHHHHC
T ss_pred cCCCcHHHHHHHHHHHHHC
Confidence 6543222344445555543
No 281
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=75.79 E-value=4.1 Score=40.21 Aligned_cols=76 Identities=8% Similarity=0.025 Sum_probs=45.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCccc-ccccE-EEEeCCCCCcccccCHHHHHHHHHHc----
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHV-KMADE-AYRLEGKSSLDTYLNQAKILDIAVRS---- 79 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~-~~aD~-~~~i~~~~~~~~~~~~~~i~~~a~~~---- 79 (720)
|.|++||.|+ +.++..+++.+.+.|+++++++.+.+...... ...+. .+.. +..|.+.+.+++++.
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~ 73 (247)
T 3dii_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHG-------DVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEEC-------CTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEe-------eCCCHHHHHHHHHHHHHHc
Confidence 4578999985 68999999999999999888854322111000 01111 2222 445555555554432
Q ss_pred -CCCEEEeCCC
Q psy15251 80 -QCQAIHPGYG 89 (720)
Q Consensus 80 -~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 74 g~id~lv~nAg 84 (247)
T 3dii_A 74 QRIDVLVNNAC 84 (247)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 6898875554
No 282
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=75.78 E-value=2.8 Score=42.04 Aligned_cols=34 Identities=29% Similarity=0.300 Sum_probs=29.1
Q ss_pred CCCEEEEEcC---cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR---GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~---G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~ 42 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD 42 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 4578999994 789999999999999998887644
No 283
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=75.54 E-value=3.5 Score=42.15 Aligned_cols=90 Identities=8% Similarity=0.020 Sum_probs=56.0
Q ss_pred CCCccCCCCEEEEEcCcHHHHHHHHHHHH----cCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHH
Q psy15251 1 MTIASCVLDSILIANRGEIACRIMRTAKK----MGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIA 76 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~G~~a~~iira~~~----~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a 76 (720)
|+++++| -||.|+|.|.++...++.+.+ .+++++++++. +. .++. +-+ .+.+.+. ++
T Consensus 1 M~~~~~~-~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~-~~------~a~~-~g~-------~~~~~~e---ll 61 (294)
T 1lc0_A 1 MITNSGK-FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSR-RE------LGSL-DEV-------RQISLED---AL 61 (294)
T ss_dssp CCCCCCS-EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECS-SC------CCEE-TTE-------EBCCHHH---HH
T ss_pred CCCCCCc-ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECc-hH------HHHH-cCC-------CCCCHHH---Hh
Confidence 6665544 489999999999988888765 47788887653 21 1211 101 1345554 44
Q ss_pred HHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 77 VRSQCQAIHPGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 77 ~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
...++|+|+..... ..+...+..+.++|..++.
T Consensus 62 ~~~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~ 94 (294)
T 1lc0_A 62 RSQEIDVAYICSES-SSHEDYIRQFLQAGKHVLV 94 (294)
T ss_dssp HCSSEEEEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCEEEEeCCc-HhHHHHHHHHHHCCCcEEE
Confidence 45678988865431 2345667777777877663
No 284
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=75.48 E-value=1.7 Score=44.54 Aligned_cols=33 Identities=15% Similarity=-0.013 Sum_probs=29.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
++++|+|+|+|..++.++..+++.|++++++..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 38 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIES 38 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEc
Confidence 457999999999999999999999999988843
No 285
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=75.44 E-value=11 Score=36.92 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=30.2
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCC
Q psy15251 6 CVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDID 42 (720)
Q Consensus 6 ~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d 42 (720)
.+.|++||.|+ |.++..+++.+.+.|+++++++.+.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 34678999984 78999999999999999988865543
No 286
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=75.16 E-value=13 Score=38.37 Aligned_cols=99 Identities=11% Similarity=-0.034 Sum_probs=52.1
Q ss_pred CEEEEEcCcH--H---HHHHHHHHHHcCCcEEEEeeCCCCCCccccc-ccEEEEeCCCCCcc------------cccCHH
Q psy15251 9 DSILIANRGE--I---ACRIMRTAKKMGIRVVSVYSDIDADALHVKM-ADEAYRLEGKSSLD------------TYLNQA 70 (720)
Q Consensus 9 ~~iLI~~~G~--~---a~~iira~~~~G~~~v~v~s~~d~~~~~~~~-aD~~~~i~~~~~~~------------~~~~~~ 70 (720)
.|||++..|. . +..+++.+++.|+++.++............. --..+.++...... ......
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWR 86 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHHHHH
Confidence 4788776442 1 3478999999999998886543211111111 11233333211000 001234
Q ss_pred HHHHHHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 71 KILDIAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 71 ~i~~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
.+.+++++.++|.||....+.+ .....++...|+|++
T Consensus 87 ~l~~~l~~~~pDvv~~~~~~~~--~~~~~~~~~~~~p~v 123 (364)
T 1f0k_A 87 QARAIMKAYKPDVVLGMGGYVS--GPGGLAAWSLGIPVV 123 (364)
T ss_dssp HHHHHHHHHCCSEEEECSSTTH--HHHHHHHHHTTCCEE
T ss_pred HHHHHHHhcCCCEEEEeCCcCc--hHHHHHHHHcCCCEE
Confidence 5677788889999997543211 222334455677765
No 287
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=75.16 E-value=4.6 Score=38.27 Aligned_cols=55 Identities=15% Similarity=0.039 Sum_probs=39.3
Q ss_pred CeeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 650 SKVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 650 ~~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
..|.|+..|+|+.+- |. .++|+--.-...+.+.. .++.|++||.|++||+|..+.
T Consensus 49 tpV~A~~~G~V~~~~---------G~-~V~I~H~~g~~t~Y~HL----~~i~V~~G~~V~~Gq~IG~vG 103 (182)
T 3it5_A 49 YSVVAAHAGTVRVLS---------RC-QVRVTHPSGWATNYYHM----DQIQVSNGQQVSADTKLGVYA 103 (182)
T ss_dssp CEEECSSSEEEEEEE---------TT-EEEEECTTSEEEEEESE----ESCCCCTTCEECTTCEEEEEC
T ss_pred CEEEeccCEEEEEEC---------Ce-EEEEEECCcEEEEEEcC----CccccCCCCEEcCCCEEEeec
Confidence 589999999998864 33 44555443344444443 356799999999999999874
No 288
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=75.03 E-value=9.3 Score=39.15 Aligned_cols=76 Identities=12% Similarity=0.093 Sum_probs=50.3
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCc-cc-ccc--cEEEEeCCCCCcccccCHHHHHHHHHHcCCCE
Q psy15251 9 DSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADAL-HV-KMA--DEAYRLEGKSSLDTYLNQAKILDIAVRSQCQA 83 (720)
Q Consensus 9 ~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~-~~-~~a--D~~~~i~~~~~~~~~~~~~~i~~~a~~~~~da 83 (720)
++|||.|+ |.++..+++.+.+.|++++++......... .. .+. .....+. .+..|.+.+.++++..++|+
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~~~~~~~~~~~d~ 78 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIH-----MDLLEFSNIIRTIEKVQPDE 78 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECC-----CCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEE-----CCCCCHHHHHHHHHhcCCCE
Confidence 58999996 899999999999999999888544322110 00 000 1111221 25567788888887778898
Q ss_pred EEeCCC
Q psy15251 84 IHPGYG 89 (720)
Q Consensus 84 I~pg~g 89 (720)
|+-..+
T Consensus 79 vih~A~ 84 (345)
T 2z1m_A 79 VYNLAA 84 (345)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 886554
No 289
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=74.76 E-value=9.2 Score=37.45 Aligned_cols=100 Identities=10% Similarity=0.100 Sum_probs=62.0
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCCC
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGYG 89 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~g 89 (720)
||.|+|.|.++..+++.+.+.|+++++++... ... +. .+.+.+.+++ .++|+|+-...
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~-~~~------~~-----------~~~~~~~l~~----~~~DvVv~~~~ 59 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR-GEH------EK-----------MVRGIDEFLQ----REMDVAVEAAS 59 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS-CCC------TT-----------EESSHHHHTT----SCCSEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC-cch------hh-----------hcCCHHHHhc----CCCCEEEECCC
Confidence 79999999999999999998999987775422 211 11 1245554442 57899886543
Q ss_pred CCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCH---HHHHHHHHHCCCC
Q psy15251 90 FLSENAEFANAVEGNRLIFVGPSSEAIRNMGIK---STSKEIMIKAEVP 135 (720)
Q Consensus 90 ~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK---~~~r~~l~~~Gvp 135 (720)
.- ........+.+.|..++.-++-... +. ..+.+.+++.|+.
T Consensus 60 ~~-~~~~~~~~~l~~G~~vv~~~~~~~~---~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 60 QQ-AVKDYAEKILKAGIDLIVLSTGAFA---DRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp HH-HHHHHHHHHHHTTCEEEESCGGGGG---SHHHHHHHHHHHHHHCCC
T ss_pred HH-HHHHHHHHHHHCCCcEEEECcccCC---hHHHHHHHHHHHHhcCCe
Confidence 11 1234455566778877754443211 11 3456667777766
No 290
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=74.63 E-value=1.9 Score=44.96 Aligned_cols=91 Identities=13% Similarity=-0.010 Sum_probs=54.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 8 LDSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
+.||.|+|.|.++...++.+++. +++++++++. +... ...+++.. -+ ...|.+.+.+ +...++|+|+.
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~-~~~~-~~~~~~~~-~~-----~~~~~~~~~l---l~~~~~D~V~i 73 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR-RLEN-AQKMAKEL-AI-----PVAYGSYEEL---CKDETIDIIYI 73 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS-SSHH-HHHHHHHT-TC-----CCCBSSHHHH---HHCTTCSEEEE
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC-CHHH-HHHHHHHc-CC-----CceeCCHHHH---hcCCCCCEEEE
Confidence 35999999999999999999985 7788877532 2111 11122211 01 1245565544 44567898875
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
..-. ......+..+.+.|..++.
T Consensus 74 ~tp~-~~h~~~~~~al~~gk~vl~ 96 (330)
T 3e9m_A 74 PTYN-QGHYSAAKLALSQGKPVLL 96 (330)
T ss_dssp CCCG-GGHHHHHHHHHHTTCCEEE
T ss_pred cCCC-HHHHHHHHHHHHCCCeEEE
Confidence 5421 2345566667777776553
No 291
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=74.50 E-value=7.3 Score=38.70 Aligned_cols=39 Identities=21% Similarity=0.275 Sum_probs=30.2
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEee
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s 39 (720)
|.|.....|++||.|+ +.++..+++.+.+.|+++++++.
T Consensus 1 M~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 1 MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 6665555689999985 68999999999999999888743
No 292
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=74.44 E-value=5.3 Score=40.71 Aligned_cols=33 Identities=18% Similarity=0.157 Sum_probs=28.7
Q ss_pred CCEEEEEcCc---HHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANRG---EIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~G---~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|++ .++..+++.+.+.|+++++++.+
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999975 89999999999999998888644
No 293
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=74.29 E-value=4.2 Score=39.70 Aligned_cols=76 Identities=11% Similarity=0.116 Sum_probs=48.2
Q ss_pred CEEEEE--cCcHHHHHHHHHHHHcCC--cEEEEeeCCCCCCcccccccE----EEEeCCCCCcccccC----HHHHHHHH
Q psy15251 9 DSILIA--NRGEIACRIMRTAKKMGI--RVVSVYSDIDADALHVKMADE----AYRLEGKSSLDTYLN----QAKILDIA 76 (720)
Q Consensus 9 ~~iLI~--~~G~~a~~iira~~~~G~--~~v~v~s~~d~~~~~~~~aD~----~~~i~~~~~~~~~~~----~~~i~~~a 76 (720)
+||+++ |.|..+..+++++.+.++ ++++|.++++.... ...|.+ .+.+.+ .++.+ -+.+++..
T Consensus 2 ~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~-~~~A~~~gIp~~~~~~----~~~~~r~~~~~~~~~~l 76 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYA-IERCKKHNVECKVIQR----KEFPSKKEFEERMALEL 76 (216)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHH-HHHHHHHTCCEEECCG----GGSSSHHHHHHHHHHHH
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHH-HHHHHHcCCCEEEeCc----ccccchhhhhHHHHHHH
Confidence 588888 999999999999998887 88888887643321 222221 122221 12222 24577788
Q ss_pred HHcCCCEEE-eCCC
Q psy15251 77 VRSQCQAIH-PGYG 89 (720)
Q Consensus 77 ~~~~~daI~-pg~g 89 (720)
++.++|.|+ .+|+
T Consensus 77 ~~~~~Dliv~a~y~ 90 (216)
T 2ywr_A 77 KKKGVELVVLAGFM 90 (216)
T ss_dssp HHTTCCEEEESSCC
T ss_pred HhcCCCEEEEeCch
Confidence 888888655 3554
No 294
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=74.25 E-value=6.3 Score=41.75 Aligned_cols=76 Identities=13% Similarity=0.102 Sum_probs=50.0
Q ss_pred CCEEEEE--cCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccc-cccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 8 LDSILIA--NRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVK-MADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 8 ~~~iLI~--~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~-~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
-+++||. +.|.++.-+++.|+.+|.+++++..+++......+ =+|+.+... +....+.+.++....++|.+
T Consensus 171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~------~~~~~~~v~~~t~~~g~d~v 244 (379)
T 3iup_A 171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAA------SPTFMQDLTEALVSTGATIA 244 (379)
T ss_dssp TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETT------STTHHHHHHHHHHHHCCCEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCC------ChHHHHHHHHHhcCCCceEE
Confidence 4678998 78999999999999999998888643322111111 145554311 11224567777777799999
Q ss_pred EeCCC
Q psy15251 85 HPGYG 89 (720)
Q Consensus 85 ~pg~g 89 (720)
+=..|
T Consensus 245 ~d~~g 249 (379)
T 3iup_A 245 FDATG 249 (379)
T ss_dssp EESCE
T ss_pred EECCC
Confidence 86665
No 295
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=74.06 E-value=2.8 Score=41.46 Aligned_cols=87 Identities=7% Similarity=0.011 Sum_probs=53.7
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHH-HcCCCEEEe-
Q psy15251 9 DSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAV-RSQCQAIHP- 86 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~-~~~~daI~p- 86 (720)
.||.|+|.|.++..+.+.+++.|++++.++... ...-+| .+.+|. ..+..+++-.. ....+.++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~-----~~~~aD-ilavP~-------~ai~~vl~~l~~~l~~g~ivvd 73 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE-----DIRDFE-LVVIDA-------HGVEGYVEKLSAFARRGQMFLH 73 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG-----GGGGCS-EEEECS-------SCHHHHHHHHHTTCCTTCEEEE
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH-----HhccCC-EEEEcH-------HHHHHHHHHHHHhcCCCCEEEE
Confidence 389999999999999999999999887765421 145688 777753 23444443333 233443432
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
..|... ....+.+...|..|++
T Consensus 74 ~sgs~~--~~vl~~~~~~g~~fvg 95 (232)
T 3dfu_A 74 TSLTHG--ITVMDPLETSGGIVMS 95 (232)
T ss_dssp CCSSCC--GGGGHHHHHTTCEEEE
T ss_pred ECCcCH--HHHHHHHHhCCCcEEE
Confidence 334332 2333444567777765
No 296
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=73.91 E-value=5.1 Score=40.12 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=28.9
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
+.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3578999985 789999999999999999888644
No 297
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=73.81 E-value=7.6 Score=38.53 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=30.6
Q ss_pred CCCccCCCCEEEEEcC-cH--HHHHHHHHHHHcCCcEEEEeeC
Q psy15251 1 MTIASCVLDSILIANR-GE--IACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~--~a~~iira~~~~G~~~v~v~s~ 40 (720)
|+|+. ..|++||.|+ |. ++..+++.+.+.|+++++++.+
T Consensus 1 M~~~l-~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 1 MNFSL-EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp CCSCC-TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred Ccccc-CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 55543 3578999986 44 9999999999999998888543
No 298
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=73.79 E-value=3 Score=44.25 Aligned_cols=116 Identities=14% Similarity=0.027 Sum_probs=68.0
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccE--EEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADE--AYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~--~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
..++|+|+|.|.++..+++.+.+. +++.+.+.+.+.. ..+++. ...+ +..+.+.+.++++ ++|+|
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a---~~la~~~~~~~~-------d~~~~~~l~~ll~--~~DvV 81 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENL---EKVKEFATPLKV-------DASNFDKLVEVMK--EFELV 81 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHH---HHHTTTSEEEEC-------CTTCHHHHHHHHT--TCSCE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHH---HHHHhhCCeEEE-------ecCCHHHHHHHHh--CCCEE
Confidence 357999999999999999999888 7765553322111 112221 1222 2345666767665 57878
Q ss_pred EeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcc
Q psy15251 85 HPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGY 140 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~ 140 (720)
+-...+ .-+..+...|.+.|..++-.+... .+=..+.+.++++|+...++.
T Consensus 82 In~~P~-~~~~~v~~a~l~~G~~~vD~s~~~----~~~~~l~~~Ak~aG~~~l~g~ 132 (365)
T 2z2v_A 82 IGALPG-FLGFKSIKAAIKSKVDMVDVSFMP----ENPLELRDEAEKAQVTIVFDA 132 (365)
T ss_dssp EECCCH-HHHHHHHHHHHHTTCCEEECCCCS----SCGGGGHHHHHHTTCEEECSC
T ss_pred EECCCh-hhhHHHHHHHHHhCCeEEEccCCc----HHHHHHHHHHHHcCCEEEECC
Confidence 765321 123456778888888876533210 111234566677777766543
No 299
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=73.59 E-value=3.6 Score=41.23 Aligned_cols=33 Identities=6% Similarity=-0.024 Sum_probs=29.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
|+.+|+|+|+|..++.++..+++.|++++++..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 346999999999999999999999999888853
No 300
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=73.40 E-value=5.1 Score=40.18 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=28.1
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD 42 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999985 789999999999999998887543
No 301
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=73.39 E-value=6 Score=39.57 Aligned_cols=81 Identities=19% Similarity=0.164 Sum_probs=47.1
Q ss_pred cCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-----cccccEEEEeCCCCCcccccCHHHHHHHHHH
Q psy15251 5 SCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALH-----VKMADEAYRLEGKSSLDTYLNQAKILDIAVR 78 (720)
Q Consensus 5 ~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-----~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~ 78 (720)
+.+.|++||.|+ |.++..+++.+.+.|+++++++......... .........+. -+..+.+.+.+++++
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~~~~~v~~~~~~ 97 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIP-----GDVGNAADIAAMFSA 97 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEE-----CCTTCHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEE-----cCCCCHHHHHHHHHH
Confidence 334678999985 7899999999999999987764322111000 00012222222 144555555555544
Q ss_pred c-----CCCEEEeCCCC
Q psy15251 79 S-----QCQAIHPGYGF 90 (720)
Q Consensus 79 ~-----~~daI~pg~g~ 90 (720)
. ++|.++-.-|.
T Consensus 98 ~~~~~g~id~li~nAg~ 114 (272)
T 4e3z_A 98 VDRQFGRLDGLVNNAGI 114 (272)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhCCCCCEEEECCCC
Confidence 3 68988765543
No 302
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=73.24 E-value=7.3 Score=39.04 Aligned_cols=78 Identities=15% Similarity=0.099 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCccc-ccccEEEEeCCCCCcccccCHHHHHHHHHHc-----
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHV-KMADEAYRLEGKSSLDTYLNQAKILDIAVRS----- 79 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~-~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~----- 79 (720)
++|++||.|+ |.++..+++.+.+.|++++++..+.+...... .+.+....+. -+..+.+.+.+++.+.
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~~~~~~~~~~~~~~~~~g 78 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAIS-----LDVTDGERIDVVAADVLARYG 78 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEE-----CCTTCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEE-----eeCCCHHHHHHHHHHHHHhCC
Confidence 4579999985 78999999999999999988864432211100 0111111111 1445666666655544
Q ss_pred CCCEEEeCCC
Q psy15251 80 QCQAIHPGYG 89 (720)
Q Consensus 80 ~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 79 ~id~lv~~Ag 88 (281)
T 3m1a_A 79 RVDVLVNNAG 88 (281)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898875544
No 303
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=73.19 E-value=1.6 Score=39.28 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=30.0
Q ss_pred CeeecCCcceeeEE---ecCCCCeee---CCC-eEEEEEe
Q psy15251 650 SKVVSPMPGMVDKV---LVQPGQAVK---TGD-PIMVIIA 682 (720)
Q Consensus 650 ~~v~ap~~g~v~~~---~v~~G~~V~---~g~-~l~~~ea 682 (720)
..|.||.+|+|+++ +++.|+.|+ .|| .|+.|+.
T Consensus 75 ~eI~aPvsG~V~eiN~~l~~~p~~Vn~dp~g~GwL~~i~~ 114 (136)
T 1zko_A 75 ADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEI 114 (136)
T ss_dssp EEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCEEEEE
T ss_pred EEEecCCCeEEEEEehhhccCccCcccCCCCCeEEEEEEE
Confidence 46999999999999 888999999 898 9999884
No 304
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=73.18 E-value=5.9 Score=39.33 Aligned_cols=78 Identities=15% Similarity=0.097 Sum_probs=46.2
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-cccccEEEEeCCCCCcccccCHHHHHHHHHHc-----
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALH-VKMADEAYRLEGKSSLDTYLNQAKILDIAVRS----- 79 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~----- 79 (720)
..|++||.|+ |.++..+++.+.+.|+++++++.+.+..... ..+......+. -+..+.+.+.+++++.
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQ-----MDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEE-----CCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEE-----eeCCCHHHHHHHHHHHHHHcC
Confidence 4578999985 7899999999999999988875432211000 00111111111 1445555555554443
Q ss_pred CCCEEEeCCC
Q psy15251 80 QCQAIHPGYG 89 (720)
Q Consensus 80 ~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 82 ~id~lv~~Ag 91 (259)
T 4e6p_A 82 GLDILVNNAA 91 (259)
T ss_dssp SCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898875554
No 305
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=73.02 E-value=5.6 Score=38.71 Aligned_cols=73 Identities=10% Similarity=0.031 Sum_probs=46.8
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHc--CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCE
Q psy15251 7 VLDSILIAN-RGEIACRIMRTAKKM--GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQA 83 (720)
Q Consensus 7 ~~~~iLI~~-~G~~a~~iira~~~~--G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~da 83 (720)
++++|||.| .|.++..+++.+.+. |++++++..+++.......-. +.+. .+..+.+.+.++.+ ++|.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~-~~~~-------~D~~d~~~~~~~~~--~~d~ 72 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEA-DVFI-------GDITDADSINPAFQ--GIDA 72 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCT-TEEE-------CCTTSHHHHHHHHT--TCSE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCe-eEEE-------ecCCCHHHHHHHHc--CCCE
Confidence 457999998 589999999999999 899888854322110000001 1222 25567777777764 5888
Q ss_pred EEeCCC
Q psy15251 84 IHPGYG 89 (720)
Q Consensus 84 I~pg~g 89 (720)
|+-..+
T Consensus 73 vi~~a~ 78 (253)
T 1xq6_A 73 LVILTS 78 (253)
T ss_dssp EEECCC
T ss_pred EEEecc
Confidence 875544
No 306
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=72.79 E-value=5.5 Score=39.71 Aligned_cols=75 Identities=15% Similarity=0.119 Sum_probs=46.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCccccc-ccEEEEeCCCCCcccccCHHHHHHHHHHc-----C
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKM-ADEAYRLEGKSSLDTYLNQAKILDIAVRS-----Q 80 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~-aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~ 80 (720)
.|++||.|+ +.++..+++.+.+.|+++++++.+.+........ .-..+.. +..+.+.+.+++++. +
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYG-------DFSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEEC-------CTTSHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEEC-------CCCCHHHHHHHHHHHHHhcCC
Confidence 468999985 7899999999999999998886554321111100 1122322 444555555544432 6
Q ss_pred CCEEEeCCC
Q psy15251 81 CQAIHPGYG 89 (720)
Q Consensus 81 ~daI~pg~g 89 (720)
+|.++-.-|
T Consensus 100 iD~lv~nAg 108 (260)
T 3gem_A 100 LRAVVHNAS 108 (260)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 898876554
No 307
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=72.79 E-value=3.3 Score=39.96 Aligned_cols=29 Identities=17% Similarity=0.110 Sum_probs=27.3
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVY 38 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~ 38 (720)
.|+|+|+|+.++.++..|++.|++|+++.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 69999999999999999999999998884
No 308
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=72.78 E-value=7.8 Score=40.53 Aligned_cols=72 Identities=10% Similarity=0.095 Sum_probs=45.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCC-cccc-cccEEEEeCCCCCccc-ccCHHHHHHHHHHcCCCE
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADA-LHVK-MADEAYRLEGKSSLDT-YLNQAKILDIAVRSQCQA 83 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~-~~~~-~aD~~~~i~~~~~~~~-~~~~~~i~~~a~~~~~da 83 (720)
.++|||.|+ |.++..+++.+.+.|++++++..+++... .... .....+.. .+ ..|.+.+.++.+ ++|+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~------~D~l~d~~~l~~~~~--~~d~ 76 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQ------GPLLNNVPLMDTLFE--GAHL 76 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEE------SCCTTCHHHHHHHHT--TCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEE------CCccCCHHHHHHHHh--cCCE
Confidence 358999984 89999999999999999988864433210 0000 00111211 25 567777777664 5787
Q ss_pred EEeC
Q psy15251 84 IHPG 87 (720)
Q Consensus 84 I~pg 87 (720)
|+-.
T Consensus 77 Vi~~ 80 (352)
T 1xgk_A 77 AFIN 80 (352)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7743
No 309
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=72.46 E-value=24 Score=34.46 Aligned_cols=71 Identities=10% Similarity=0.113 Sum_probs=46.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc-----CC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS-----QC 81 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~~ 81 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+.+.... . -..+.. +..|.+.+.+++++. ++
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~--~--~~~~~~-------D~~d~~~~~~~~~~~~~~~g~i 75 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY--P--FATEVM-------DVADAAQVAQVCQRLLAETERL 75 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCC--S--SEEEEC-------CTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcC--C--ceEEEc-------CCCCHHHHHHHHHHHHHHcCCC
Confidence 468999985 789999999999999999888654432111 1 122222 445566665555442 68
Q ss_pred CEEEeCCC
Q psy15251 82 QAIHPGYG 89 (720)
Q Consensus 82 daI~pg~g 89 (720)
|.++-.-|
T Consensus 76 d~lv~~Ag 83 (250)
T 2fwm_X 76 DALVNAAG 83 (250)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98876554
No 310
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=72.39 E-value=4.6 Score=40.22 Aligned_cols=34 Identities=24% Similarity=0.179 Sum_probs=29.0
Q ss_pred CCCEEEEEcC-c-HHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-G-EIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G-~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..|++||.|+ | .++..+++.+.+.|+++++++.+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 3578999998 6 69999999999999998888543
No 311
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=72.25 E-value=9.2 Score=39.60 Aligned_cols=38 Identities=13% Similarity=0.267 Sum_probs=33.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADA 45 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~ 45 (720)
|.||++.|..+.|+..++++.+.|+++++|.+.+|.+.
T Consensus 4 mmrIvf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~~ 41 (317)
T 3rfo_A 4 MIKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPV 41 (317)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCEEEEEECCCCCEE
T ss_pred ceEEEEEeCCHHHHHHHHHHHHCCCcEEEEEeCCCccc
Confidence 45899999999999999999999999999999877653
No 312
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=72.06 E-value=8.1 Score=44.53 Aligned_cols=77 Identities=10% Similarity=0.097 Sum_probs=50.8
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCCCCccc-cc----cc--EEEEeCCCCCcccccCHHHHHHHHHH
Q psy15251 7 VLDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDADALHV-KM----AD--EAYRLEGKSSLDTYLNQAKILDIAVR 78 (720)
Q Consensus 7 ~~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~-~~----aD--~~~~i~~~~~~~~~~~~~~i~~~a~~ 78 (720)
++++|||.| .|.++..+++.+.+.|++|+++........... .+ .. +.+. .+..+.+.+.+++++
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~-------~Dl~d~~~l~~~~~~ 82 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYE-------VDLCDRKGLEKVFKE 82 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEE-------CCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEE-------cCCCCHHHHHHHHHh
Confidence 357999998 589999999999999999988854332211000 00 01 1222 255677788888877
Q ss_pred cCCCEEEeCCCC
Q psy15251 79 SQCQAIHPGYGF 90 (720)
Q Consensus 79 ~~~daI~pg~g~ 90 (720)
.++|+|+-..+.
T Consensus 83 ~~~D~Vih~A~~ 94 (699)
T 1z45_A 83 YKIDSVIHFAGL 94 (699)
T ss_dssp SCCCEEEECCSC
T ss_pred CCCCEEEECCcc
Confidence 789988865543
No 313
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=71.87 E-value=2.8 Score=43.06 Aligned_cols=137 Identities=12% Similarity=0.158 Sum_probs=77.8
Q ss_pred CCEEEEEcCcHHHHH-HHHHHHH-cCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 8 LDSILIANRGEIACR-IMRTAKK-MGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~-iira~~~-~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
+.||.|+|.|.++.. .++.+++ .+++++++++.....+ ..++++ +-+ ..|.+.+.+++ ++|+|+
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~--~~~a~~-~~~------~~~~~~~~ll~-----~~D~V~ 71 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKR--EKICSD-YRI------MPFDSIESLAK-----KCDCIF 71 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHH--HHHHHH-HTC------CBCSCHHHHHT-----TCSEEE
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHH--HHHHHH-cCC------CCcCCHHHHHh-----cCCEEE
Confidence 358999999999996 8888887 4788887754321111 112221 101 12667776665 799888
Q ss_pred eCCCCCcccHHHHHHHHHCCCeEeC--CCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEE
Q psy15251 86 PGYGFLSENAEFANAVEGNRLIFVG--PSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMI 163 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~~gl~~~G--p~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~Pvvv 163 (720)
...-. ......+..+.+.|.+++. |-....+ +=..+.+++++.|+..--++. ..-......+.+.+|-+.++
T Consensus 72 i~tp~-~~h~~~~~~al~~gk~vl~EKP~~~~~~---~~~~l~~~a~~~g~~~~v~~~--~r~~p~~~~~~~~ig~~~~~ 145 (308)
T 3uuw_A 72 LHSST-ETHYEIIKILLNLGVHVYVDKPLASTVS---QGEELIELSTKKNLNLMVGFN--RRFCPMYKEIKNNATEIVSI 145 (308)
T ss_dssp ECCCG-GGHHHHHHHHHHTTCEEEECSSSSSSHH---HHHHHHHHHHHHTCCEEECCG--GGGCHHHHHHHHHCCSEEEE
T ss_pred EeCCc-HhHHHHHHHHHHCCCcEEEcCCCCCCHH---HHHHHHHHHHHcCCEEEEeec--cccCHHHHHHHHHcCCCcEE
Confidence 65432 2346677778888988765 2221211 122356677888887655443 11122333333456655443
Q ss_pred e
Q psy15251 164 K 164 (720)
Q Consensus 164 K 164 (720)
.
T Consensus 146 ~ 146 (308)
T 3uuw_A 146 N 146 (308)
T ss_dssp E
T ss_pred E
Confidence 3
No 314
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=71.58 E-value=2.5 Score=44.20 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=31.5
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCC
Q psy15251 9 DSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDAD 44 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~ 44 (720)
.||+++|....+..+++++.+.|+++++|.+.+|.+
T Consensus 23 mrIvf~G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~ 58 (329)
T 2bw0_A 23 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKD 58 (329)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEEECCCCS
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEEeCCCcC
Confidence 389999988899999999999999999999876653
No 315
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=71.55 E-value=14 Score=36.94 Aligned_cols=62 Identities=10% Similarity=0.185 Sum_probs=45.7
Q ss_pred EEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 10 SILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
||||.|+ |.++..+++.+. .|++++++..... .+ ..+..|.+.+.++.+..++|+|+-..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~-------~~D~~d~~~~~~~~~~~~~d~vih~a 62 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EF-------CGDFSNPKGVAETVRKLRPDVIVNAA 62 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SS-------CCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------cc-------cccCCCHHHHHHHHHhcCCCEEEECc
Confidence 7999986 899999999999 8999888743220 01 12456777888888777899888655
Q ss_pred CC
Q psy15251 89 GF 90 (720)
Q Consensus 89 g~ 90 (720)
+.
T Consensus 63 ~~ 64 (299)
T 1n2s_A 63 AH 64 (299)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 316
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=71.53 E-value=12 Score=36.67 Aligned_cols=76 Identities=11% Similarity=0.006 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCccccccc-EEEEeCCCCCcccccCHHHHHHHHHHc-CCCE
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMAD-EAYRLEGKSSLDTYLNQAKILDIAVRS-QCQA 83 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD-~~~~i~~~~~~~~~~~~~~i~~~a~~~-~~da 83 (720)
..|++||.|+ |.++..+++.+.+.|+++++++.+.+.......+.. ..+. -+..+.+.+.++.++. ++|.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~D~~~~~~~~~~~~~~~~id~ 77 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV-------LDVTKKKQIDQFANEVERLDV 77 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEE-------CCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEE-------eeCCCHHHHHHHHHHhCCCCE
Confidence 3478999985 789999999999999998888543221110011111 1222 2456677777776665 5898
Q ss_pred EEeCCC
Q psy15251 84 IHPGYG 89 (720)
Q Consensus 84 I~pg~g 89 (720)
++-.-|
T Consensus 78 lv~~Ag 83 (246)
T 2ag5_A 78 LFNVAG 83 (246)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 875544
No 317
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=71.47 E-value=6.1 Score=43.17 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=29.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.+++||+|+|..|.+.++.+.+.|.+++++..+
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 479999999999999999999999998888543
No 318
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=71.42 E-value=6.8 Score=38.87 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=30.5
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|.|+. ..|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 1 m~~~l-~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 1 MDMGI-SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CCCCC-TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCC-CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 44433 2478999985 789999999999999998887543
No 319
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=71.20 E-value=15 Score=37.77 Aligned_cols=76 Identities=12% Similarity=0.082 Sum_probs=46.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHc--CCcEEEEeeCCCCCC-cc-cccc-cEEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKKM--GIRVVSVYSDIDADA-LH-VKMA-DEAYRLEGKSSLDTYLNQAKILDIAVRSQC 81 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~~--G~~~v~v~s~~d~~~-~~-~~~a-D~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 81 (720)
|++|||.| .|.++..+++.+.+. |++++++........ .. ..+. +....+. .+..|.+.+.++++ ++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~~~~~~~--~~ 76 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVV-----GDIADAELVDKLAA--KA 76 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEE-----CCTTCHHHHHHHHT--TC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEE-----CCCCCHHHHHHHhh--cC
Confidence 56999999 589999999999998 899888864332111 00 0110 1111111 25567777777665 45
Q ss_pred CEEEeCCCC
Q psy15251 82 QAIHPGYGF 90 (720)
Q Consensus 82 daI~pg~g~ 90 (720)
|+|+-..+.
T Consensus 77 d~vih~A~~ 85 (348)
T 1oc2_A 77 DAIVHYAAE 85 (348)
T ss_dssp SEEEECCSC
T ss_pred CEEEECCcc
Confidence 888755543
No 320
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=71.15 E-value=8.6 Score=38.02 Aligned_cols=40 Identities=13% Similarity=0.152 Sum_probs=29.5
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCC
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDI 41 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~ 41 (720)
|.|+. ..|++||.|+ +.++..+++.+.+.|+++++++.+.
T Consensus 1 M~~~~-~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 1 MSLTP-RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp ----C-CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCcCC-CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 44433 3578999985 6899999999999999988886543
No 321
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=70.97 E-value=11 Score=38.23 Aligned_cols=73 Identities=8% Similarity=0.035 Sum_probs=47.1
Q ss_pred EEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 10 SILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
+|||.|+ |.++..+++.+.+.|++++++........ ..+.+....+ ..+..+.+.+.++.++.++|.|+-..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~-----~~Dl~~~~~~~~~~~~~~~d~vi~~a 74 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR--ENVPKGVPFF-----RVDLRDKEGVERAFREFRPTHVSHQA 74 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG--GGSCTTCCEE-----CCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch--hhcccCeEEE-----ECCCCCHHHHHHHHHhcCCCEEEECc
Confidence 7999985 89999999999999999888743221111 1111111111 12556777777777777899887554
Q ss_pred C
Q psy15251 89 G 89 (720)
Q Consensus 89 g 89 (720)
+
T Consensus 75 ~ 75 (311)
T 2p5y_A 75 A 75 (311)
T ss_dssp S
T ss_pred c
Confidence 4
No 322
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=70.77 E-value=5.5 Score=39.69 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=28.8
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|.|++||.|+ +.|+..+++.+.+.|.++++++.+
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999984 679999999999999999888654
No 323
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=70.32 E-value=4.2 Score=41.72 Aligned_cols=33 Identities=15% Similarity=-0.009 Sum_probs=29.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..+|+|+|+|..++.++..+++.|++++++...
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPL 37 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 458999999999999999999999999888543
No 324
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=70.28 E-value=22 Score=35.35 Aligned_cols=72 Identities=14% Similarity=0.277 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc-----C
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS-----Q 80 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~ 80 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.+...... .+ ..+.+ +..|.+.+.+++++. +
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~-------Dv~~~~~v~~~~~~~~~~~g~ 81 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN---VS-DHFKI-------DVTNEEEVKEAVEKTTKKYGR 81 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT---SS-EEEEC-------CTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC---ce-eEEEe-------cCCCHHHHHHHHHHHHHHcCC
Confidence 4689999985 689999999999999999888654433211 11 22332 445555555555443 6
Q ss_pred CCEEEeCCC
Q psy15251 81 CQAIHPGYG 89 (720)
Q Consensus 81 ~daI~pg~g 89 (720)
+|.++-.-|
T Consensus 82 iD~lv~nAg 90 (269)
T 3vtz_A 82 IDILVNNAG 90 (269)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 898875554
No 325
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=70.22 E-value=4 Score=42.05 Aligned_cols=86 Identities=8% Similarity=0.076 Sum_probs=49.8
Q ss_pred CEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 9 DSILIANRGEIACR-IMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 9 ~~iLI~~~G~~a~~-iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
.||.|+|.|.++.. +++.+++. |++++++++. +.... ..+++.. + . ..|.+.+.+ ..++|+|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~-~~~~~-~~~~~~~---g-~---~~~~~~~~l-----~~~~D~V~i 71 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP-TRAKA-LPICESW---R-I---PYADSLSSL-----AASCDAVFV 71 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS-SCTTH-HHHHHHH---T-C---CBCSSHHHH-----HTTCSEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC-CHHHH-HHHHHHc---C-C---CccCcHHHh-----hcCCCEEEE
Confidence 48999999999987 88888774 7888877542 22211 1122210 1 0 124455433 357898885
Q ss_pred CCCCCcccHHHHHHHHHCCCeEe
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
.... ......+..+.+.|..++
T Consensus 72 ~tp~-~~h~~~~~~al~~G~~v~ 93 (319)
T 1tlt_A 72 HSST-ASHFDVVSTLLNAGVHVC 93 (319)
T ss_dssp CSCT-THHHHHHHHHHHTTCEEE
T ss_pred eCCc-hhHHHHHHHHHHcCCeEE
Confidence 4421 123455666666777654
No 326
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=70.17 E-value=4.5 Score=39.31 Aligned_cols=34 Identities=24% Similarity=0.236 Sum_probs=28.7
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 457899998 4789999999999999998888543
No 327
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=70.14 E-value=9.3 Score=37.70 Aligned_cols=40 Identities=18% Similarity=0.126 Sum_probs=31.4
Q ss_pred CCCccC----CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 1 MTIASC----VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 1 m~~~~~----~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|+|+.+ ..|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 665433 2478999985 689999999999999998888543
No 328
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=70.11 E-value=4.8 Score=43.09 Aligned_cols=35 Identities=9% Similarity=0.129 Sum_probs=28.7
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCc--EEEEeeCC
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIR--VVSVYSDI 41 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~--~v~v~s~~ 41 (720)
|+++|+|+|+|..++..++.+++.|++ ++++..++
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 346999999999999999999999998 77775443
No 329
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=69.98 E-value=8.6 Score=38.73 Aligned_cols=35 Identities=26% Similarity=0.233 Sum_probs=29.3
Q ss_pred cCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEee
Q psy15251 5 SCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 5 ~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s 39 (720)
+.+.|++||.|+ +.++..+++.+.+.|+++++++.
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 345689999985 78999999999999999888743
No 330
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=69.90 E-value=58 Score=35.49 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=26.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CC---cEEEEeeCC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKM-GI---RVVSVYSDI 41 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~-G~---~~v~v~s~~ 41 (720)
.+||||+|.|.++..+++.|.+. ++ ++++++.+.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~ 50 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEG 50 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccch
Confidence 36899999999999999888664 56 577775443
No 331
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=69.82 E-value=4.8 Score=42.74 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=29.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
+..+|+|+|+|..++.++..|++.|++++++...
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 3458999999999999999999999998888543
No 332
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=69.64 E-value=6.9 Score=39.26 Aligned_cols=62 Identities=13% Similarity=0.068 Sum_probs=46.5
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
+-++|||.|+ |-++..+++.+.+.|++++++... ..+..|.+.+.++.+..++|+|+
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~~~~d~vi 68 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDITNVLAVNKFFNEKKPNVVI 68 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence 4579999985 899999999999999998887321 01445677777777777899888
Q ss_pred eCCCC
Q psy15251 86 PGYGF 90 (720)
Q Consensus 86 pg~g~ 90 (720)
-..+.
T Consensus 69 h~A~~ 73 (292)
T 1vl0_A 69 NCAAH 73 (292)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 65543
No 333
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=69.49 E-value=6.6 Score=39.36 Aligned_cols=35 Identities=20% Similarity=0.133 Sum_probs=29.6
Q ss_pred CCCEEEEEcC---cHHHHHHHHHHHHcCCcEEEEeeCC
Q psy15251 7 VLDSILIANR---GEIACRIMRTAKKMGIRVVSVYSDI 41 (720)
Q Consensus 7 ~~~~iLI~~~---G~~a~~iira~~~~G~~~v~v~s~~ 41 (720)
..|++||.|+ |.++..+++.+.+.|+++++++.+.
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999996 5899999999999999988886544
No 334
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=69.45 E-value=32 Score=34.27 Aligned_cols=34 Identities=9% Similarity=-0.027 Sum_probs=29.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 4579999984 789999999999999998888654
No 335
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=69.33 E-value=9.7 Score=35.80 Aligned_cols=61 Identities=15% Similarity=0.164 Sum_probs=43.6
Q ss_pred EEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc-CCCEEEeC
Q psy15251 10 SILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS-QCQAIHPG 87 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-~~daI~pg 87 (720)
|+||.|+ |.++..+++.+. .|++++++..+.. .+. -+..+.+.+.++.++. ++|.++-.
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~-------~D~~~~~~~~~~~~~~~~~d~vi~~ 65 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVT-------VDITNIDSIKKMYEQVGKVDAIVSA 65 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEE-------CCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------cee-------eecCCHHHHHHHHHHhCCCCEEEEC
Confidence 6999984 789999999999 9999888854432 122 1456677777777665 57888755
Q ss_pred CC
Q psy15251 88 YG 89 (720)
Q Consensus 88 ~g 89 (720)
-|
T Consensus 66 ag 67 (202)
T 3d7l_A 66 TG 67 (202)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 336
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=69.20 E-value=5.3 Score=41.29 Aligned_cols=37 Identities=19% Similarity=0.093 Sum_probs=29.3
Q ss_pred ccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 4 ASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 4 ~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
+...+++|||.|+ |.++..+++.+.+.|++++++...
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3445679999996 899999999999999999888643
No 337
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=69.17 E-value=27 Score=36.31 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=29.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDID 42 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d 42 (720)
.|++||.|+ +.|+..+++.+.+.|+++++++.+.+
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~ 80 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQ 80 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChh
Confidence 478999985 78999999999999999988865544
No 338
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=69.09 E-value=4.9 Score=40.59 Aligned_cols=33 Identities=15% Similarity=0.095 Sum_probs=29.5
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEE-Ee
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMGIRVVS-VY 38 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G~~~v~-v~ 38 (720)
+.+++|+|+|+|..++.++..+++.|+++++ +.
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e 35 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFE 35 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHTCSCEEEEC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Confidence 3467999999999999999999999999988 63
No 339
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=69.08 E-value=9.6 Score=38.80 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=28.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..|++||.|+ |.++..+++.+.+.|++++++..+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3478999985 789999999999999998887543
No 340
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=68.74 E-value=13 Score=36.08 Aligned_cols=77 Identities=9% Similarity=0.075 Sum_probs=46.0
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcC--CcEEEEeeCCCCCCccccc-ccEEEEeCCCCCcccccCHHHHHHHHHHc----
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMG--IRVVSVYSDIDADALHVKM-ADEAYRLEGKSSLDTYLNQAKILDIAVRS---- 79 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G--~~~v~v~s~~d~~~~~~~~-aD~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 79 (720)
.|++||.|+ |.++..+++.+.+.| ++++++..+.+.......+ ......+. -+..+.+.+.+++++.
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLP-----LTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEE-----CCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEE-----eecCCHHHHHHHHHHHHHhc
Confidence 468999985 789999999999999 9988886543322110000 01111111 1445555555554432
Q ss_pred ---CCCEEEeCCC
Q psy15251 80 ---QCQAIHPGYG 89 (720)
Q Consensus 80 ---~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 78 g~~~id~li~~Ag 90 (250)
T 1yo6_A 78 GSDGLSLLINNAG 90 (250)
T ss_dssp GGGCCCEEEECCC
T ss_pred CCCCCcEEEECCc
Confidence 7998886554
No 341
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=68.61 E-value=5.1 Score=42.24 Aligned_cols=116 Identities=10% Similarity=-0.089 Sum_probs=65.6
Q ss_pred EEEEEcCcHHHHHHHHHHHHc--------CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy15251 10 SILIANRGEIACRIMRTAKKM--------GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQC 81 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~--------G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 81 (720)
||.|+|.|.++..-+++++++ +.++++|++.....+ ..++++. -+ ...|.|.+.+ +...++
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a--~~~a~~~-g~-----~~~y~d~~el---l~~~~i 95 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLA--EARAGEF-GF-----EKATADWRAL---IADPEV 95 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTH--HHHHHHH-TC-----SEEESCHHHH---HHCTTC
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHH--HHHHHHh-CC-----CeecCCHHHH---hcCCCC
Confidence 899999999988766666553 678888864322222 1222221 00 1245666654 445689
Q ss_pred CEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCC
Q psy15251 82 QAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIP 138 (720)
Q Consensus 82 daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~ 138 (720)
|+|+...- -.-....+..+.++|..++.-.|-+.. +.+=..+.+++++.|+..--
T Consensus 96 DaV~IatP-~~~H~~~a~~al~aGkhVl~EKPla~~-~~ea~~l~~~a~~~g~~l~v 150 (393)
T 4fb5_A 96 DVVSVTTP-NQFHAEMAIAALEAGKHVWCEKPMAPA-YADAERMLATAERSGKVAAL 150 (393)
T ss_dssp CEEEECSC-GGGHHHHHHHHHHTTCEEEECSCSCSS-HHHHHHHHHHHHHSSSCEEE
T ss_pred cEEEECCC-hHHHHHHHHHHHhcCCeEEEccCCccc-HHHHHHhhhhHHhcCCcccc
Confidence 99876542 123567788888899887752221111 01222445566666665533
No 342
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=68.52 E-value=8.9 Score=37.67 Aligned_cols=69 Identities=16% Similarity=0.166 Sum_probs=46.9
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc--CCCEE
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS--QCQAI 84 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~--~~daI 84 (720)
||++||.|+ |.++..+++.+.+.|++++++..+.+... .+ + .-+..+.+.+.+++++. ++|.+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~----~-----~~Dl~~~~~v~~~~~~~~~~id~l 66 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----AD----L-----STAEGRKQAIADVLAKCSKGMDGL 66 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----CC----T-----TSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----cc----c-----ccCCCCHHHHHHHHHHhCCCCCEE
Confidence 478999985 78999999999999999888854432211 00 1 12445566677777665 57988
Q ss_pred EeCCCC
Q psy15251 85 HPGYGF 90 (720)
Q Consensus 85 ~pg~g~ 90 (720)
+-.-|.
T Consensus 67 v~~Ag~ 72 (257)
T 1fjh_A 67 VLCAGL 72 (257)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 765553
No 343
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=68.39 E-value=3.4 Score=43.48 Aligned_cols=87 Identities=7% Similarity=-0.027 Sum_probs=54.2
Q ss_pred CEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 9 DSILIANRGEIACR-IMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 9 ~~iLI~~~G~~a~~-iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
-||.|+|.|.++.. .++.+++. +++++++++. +... .+.. + + ....|.+.+.+ +...++|+|+.
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~-~~~~----~~~~-~--~---~~~~~~~~~~l---l~~~~vD~V~i 71 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS-RTEE----VKRD-F--P---DAEVVHELEEI---TNDPAIELVIV 71 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS-CHHH----HHHH-C--T---TSEEESSTHHH---HTCTTCCEEEE
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC-CHHH----HHhh-C--C---CCceECCHHHH---hcCCCCCEEEE
Confidence 48999999999987 67888776 8888888643 2211 1111 0 0 11234555544 44567998886
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
.... ......+..+.++|..++.
T Consensus 72 ~tp~-~~H~~~~~~al~aGkhVl~ 94 (358)
T 3gdo_A 72 TTPS-GLHYEHTMACIQAGKHVVM 94 (358)
T ss_dssp CSCT-TTHHHHHHHHHHTTCEEEE
T ss_pred cCCc-HHHHHHHHHHHHcCCeEEE
Confidence 5532 2346677777888887664
No 344
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=68.38 E-value=4.2 Score=41.42 Aligned_cols=30 Identities=13% Similarity=0.310 Sum_probs=24.0
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVY 38 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~ 38 (720)
|++|||.|+ |.++..+++.+.+.| .++++.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~ 31 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVID 31 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEE
Confidence 358999995 899999999999999 556653
No 345
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=68.32 E-value=21 Score=35.43 Aligned_cols=113 Identities=12% Similarity=0.120 Sum_probs=64.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCc-----c--cccccEEEEeCCCCCcccccCHHHHHHHHHHcC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADAL-----H--VKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQ 80 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~-----~--~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~ 80 (720)
.++|||+|.|..+..+++.+.+.|+..+.+. |.|.-.. . ....| ++ ..-.+.+.+.+++.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lv-D~d~v~~sNL~Rq~l~~~~d----iG-------~~Ka~~~~~~l~~~n 95 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLA-DDDDVHLSNLQRQILFTTED----ID-------RPKSQVSQQRLTQLN 95 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEE-CCCBCCGGGTTTCTTCCGGG----TT-------SBHHHHHHHHHHHHC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEE-eCCCcccccCCCCccCChhh----CC-------CHHHHHHHHHHHHHC
Confidence 4699999999999999999999999766553 2222111 0 11111 11 122455556666655
Q ss_pred CCE-EEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCC
Q psy15251 81 CQA-IHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIP 138 (720)
Q Consensus 81 ~da-I~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~ 138 (720)
.+. |..-...+.+ ..+...+....+.+-..+... .|....+.+.+.|+|..-
T Consensus 96 p~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~d~~~-----~r~~l~~~~~~~~~p~i~ 148 (251)
T 1zud_1 96 PDIQLTALQQRLTG-EALKDAVARADVVLDCTDNMA-----TRQEINAACVALNTPLIT 148 (251)
T ss_dssp TTSEEEEECSCCCH-HHHHHHHHHCSEEEECCSSHH-----HHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEeccCCH-HHHHHHHhcCCEEEECCCCHH-----HHHHHHHHHHHhCCCEEE
Confidence 442 2221122322 234556677777665433222 245666777788888654
No 346
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=68.28 E-value=7.6 Score=37.95 Aligned_cols=34 Identities=12% Similarity=0.049 Sum_probs=28.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999985 789999999999999998888543
No 347
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=68.26 E-value=5 Score=42.98 Aligned_cols=36 Identities=11% Similarity=0.179 Sum_probs=30.5
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCc--EEEEeeCC
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMGIR--VVSVYSDI 41 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G~~--~v~v~s~~ 41 (720)
.+.++|+|+|+|..++.++..+++.|++ ++++..++
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 44 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREP 44 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSS
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCC
Confidence 3457999999999999999999999998 77775443
No 348
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=68.25 E-value=14 Score=37.14 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=28.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDI 41 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~ 41 (720)
.|++||.|+ +.++..+++.+.+.|+++++++.+.
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 66 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHS 66 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 478999985 7899999999999999988886543
No 349
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=68.25 E-value=6.2 Score=39.34 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=30.4
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|+......|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 1 M~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 1 MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp --CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4433334678999985 689999999999999998888543
No 350
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=68.20 E-value=18 Score=38.04 Aligned_cols=74 Identities=19% Similarity=0.154 Sum_probs=48.8
Q ss_pred EEEEEcC-cHHHHHHHHHHH-HcCCcEEEEeeCCCCC--------Ccccc-----c-------c---cEEEEeCCCCCcc
Q psy15251 10 SILIANR-GEIACRIMRTAK-KMGIRVVSVYSDIDAD--------ALHVK-----M-------A---DEAYRLEGKSSLD 64 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~-~~G~~~v~v~s~~d~~--------~~~~~-----~-------a---D~~~~i~~~~~~~ 64 (720)
+|||.|+ |.++..+++.+. +.|++++++....... ..... + . -+.+. .
T Consensus 4 ~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 76 (397)
T 1gy8_A 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEV-------G 76 (397)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEE-------S
T ss_pred EEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEE-------C
Confidence 8999984 899999999999 9999998886433321 00000 0 0 11222 2
Q ss_pred cccCHHHHHHHHHHcC-CCEEEeCCCC
Q psy15251 65 TYLNQAKILDIAVRSQ-CQAIHPGYGF 90 (720)
Q Consensus 65 ~~~~~~~i~~~a~~~~-~daI~pg~g~ 90 (720)
+..+.+.+.++.++.+ +|+|+-..+.
T Consensus 77 Dl~d~~~~~~~~~~~~~~d~vih~A~~ 103 (397)
T 1gy8_A 77 DVRNEDFLNGVFTRHGPIDAVVHMCAF 103 (397)
T ss_dssp CTTCHHHHHHHHHHSCCCCEEEECCCC
T ss_pred CCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 5567777878877777 9988865543
No 351
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=68.08 E-value=22 Score=34.71 Aligned_cols=70 Identities=11% Similarity=0.078 Sum_probs=45.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc-----CC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS-----QC 81 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~~ 81 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+.+.... .. .+.+ +..+.+.+.+++++. ++
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~--~~~~-------D~~~~~~~~~~~~~~~~~~g~i 82 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---LF--GVEV-------DVTDSDAVDRAFTAVEEHQGPV 82 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT---SE--EEEC-------CTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH---hc--Ceec-------cCCCHHHHHHHHHHHHHHcCCC
Confidence 478999984 789999999999999999888654432211 11 1322 345555555544432 58
Q ss_pred CEEEeCCC
Q psy15251 82 QAIHPGYG 89 (720)
Q Consensus 82 daI~pg~g 89 (720)
|.++-.-|
T Consensus 83 d~lv~~Ag 90 (247)
T 1uzm_A 83 EVLVSNAG 90 (247)
T ss_dssp SEEEEECS
T ss_pred CEEEECCC
Confidence 88875544
No 352
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=68.03 E-value=5.5 Score=42.26 Aligned_cols=31 Identities=13% Similarity=0.060 Sum_probs=28.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVY 38 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~ 38 (720)
..+|+|+|+|..++.++..|++.|++++++.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E 35 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYE 35 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEe
Confidence 3589999999999999999999999988884
No 353
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=68.02 E-value=6.1 Score=36.50 Aligned_cols=33 Identities=9% Similarity=0.152 Sum_probs=29.3
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCC
Q psy15251 9 DSILIANRGEIACRIMRTAKKMGIRVVSVYSDI 41 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~ 41 (720)
.+++|+|+|..++.++..++++|.+++++...+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 489999999999999999999999998886443
No 354
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=67.97 E-value=5.1 Score=43.64 Aligned_cols=89 Identities=9% Similarity=-0.003 Sum_probs=52.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCc---ccccccEEEEeCCCCCcccccCHHHHHHHHHHcC-CC
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADAL---HVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQ-CQ 82 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~---~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~-~d 82 (720)
..|+|+|+|-|..+..+++.++++|++|.+.+........ ..+...-.+.++..+ +.++ .+ +|
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~--------~~~~-----~~~~d 74 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHP--------LELL-----DEDFC 74 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCC--------GGGG-----GSCEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCCh--------HHhh-----cCCCC
Confidence 3589999999999999999999999998887543321111 011112223333210 0010 13 67
Q ss_pred EEEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 83 AIHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 83 aI~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
.|+...|.-..++.+ ..+.+.|++++
T Consensus 75 ~vv~spgi~~~~p~~-~~a~~~gi~v~ 100 (451)
T 3lk7_A 75 YMIKNPGIPYNNPMV-KKALEKQIPVL 100 (451)
T ss_dssp EEEECTTSCTTSHHH-HHHHHTTCCEE
T ss_pred EEEECCcCCCCChhH-HHHHHCCCcEE
Confidence 777666654455554 34566788877
No 355
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=67.97 E-value=16 Score=40.47 Aligned_cols=86 Identities=16% Similarity=0.061 Sum_probs=56.3
Q ss_pred CCEEEEEcCcHHHHHHHHHH-HHcCCcEEEEeeCCCCCCc-----ccccccEEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy15251 8 LDSILIANRGEIACRIMRTA-KKMGIRVVSVYSDIDADAL-----HVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQC 81 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~-~~~G~~~v~v~s~~d~~~~-----~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 81 (720)
-||++|.+.+..+..+++.+ +++|.+++.+.+.-..... ...+.|+.+. . .|...+.+.+++.++
T Consensus 303 Gkrv~i~gd~~~~~~l~~~L~~elGm~vv~~gt~~~~~~~~~~~~l~~~~~~v~~-~--------~D~~el~~~i~~~~p 373 (511)
T 2xdq_B 303 GKKAVVFGDNTHAAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVAGFCDEVLI-T--------DDHTVVGDAIARVEP 373 (511)
T ss_dssp TCEEEEEECHHHHHHHHHHHHHHHCCEEEEEEESCGGGHHHHHHHHTTTSSEEEE-C--------CCHHHHHHHHHHHCC
T ss_pred CCEEEEEcCChHHHHHHHHHHHhCCCEEEEeecCCCCchHHHHHHHHhcCCcEEE-e--------CCHHHHHHHHHhcCC
Confidence 47999999999999999999 8999999887543211110 1123454433 2 256678888888899
Q ss_pred CEEEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 82 QAIHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 82 daI~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
|.++-+ ..-....++.|+|++
T Consensus 374 Dl~ig~-------~~~r~~a~k~gip~~ 394 (511)
T 2xdq_B 374 AAIFGT-------QMERHVGKRLNIPCG 394 (511)
T ss_dssp SEEEEC-------HHHHHHHHHHTCCEE
T ss_pred CEEEec-------cchHHHHHhcCCCeE
Confidence 987732 222334455677653
No 356
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=67.94 E-value=10 Score=39.52 Aligned_cols=87 Identities=14% Similarity=0.082 Sum_probs=55.6
Q ss_pred CEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 9 DSILIANRGEIACR-IMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 9 ~~iLI~~~G~~a~~-iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
-||.|+|.|.++.. .++.+++. +++++++++. +..... +. + .....|.+.+.++ ...++|+|+.
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~-~~~~~~---~~--~-----~~~~~~~~~~~ll---~~~~vD~V~i 73 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS-DASKVH---AD--W-----PAIPVVSDPQMLF---NDPSIDLIVI 73 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS-CHHHHH---TT--C-----SSCCEESCHHHHH---HCSSCCEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC-CHHHHH---hh--C-----CCCceECCHHHHh---cCCCCCEEEE
Confidence 48999999999987 78888877 8888888643 211111 11 0 1123456666554 4567999886
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
..- -......+..+.++|..++.
T Consensus 74 ~tp-~~~H~~~~~~al~aGkhV~~ 96 (352)
T 3kux_A 74 PTP-NDTHFPLAQSALAAGKHVVV 96 (352)
T ss_dssp CSC-TTTHHHHHHHHHHTTCEEEE
T ss_pred eCC-hHHHHHHHHHHHHCCCcEEE
Confidence 542 22346677778888887664
No 357
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=67.89 E-value=7.6 Score=37.85 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=28.1
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ |.++..+++.+.+.|++++++..+
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999984 789999999999999998888543
No 358
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=67.86 E-value=3.3 Score=50.32 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=26.6
Q ss_pred EEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEE
Q psy15251 662 KVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIE 698 (720)
Q Consensus 662 ~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~ 698 (720)
.++|++||.|++||.|+.-. --.++|.|..+|+|.
T Consensus 1002 ~l~v~~g~~V~~g~~ia~wD--p~~~piise~~G~v~ 1036 (1407)
T 3lu0_D 1002 VLAKGDGEQVAGGETVANWD--PHTMPVITEVSGFVR 1036 (1407)
T ss_dssp EESSCSSCEECTTCEEEECC--SSCCCEECSSCEEEE
T ss_pred EEEEcCCCEecCCCEEEEEe--cCceeEEeccceEEE
Confidence 46799999999999998764 345666677777664
No 359
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=67.83 E-value=11 Score=38.39 Aligned_cols=77 Identities=12% Similarity=0.074 Sum_probs=46.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccc-c---c-cEEEEeCCCCCcccccCHHHHHHHHHHc--
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVK-M---A-DEAYRLEGKSSLDTYLNQAKILDIAVRS-- 79 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~-~---a-D~~~~i~~~~~~~~~~~~~~i~~~a~~~-- 79 (720)
.|++||.|+ |.|+..+++.+.+.|+++++++.+.+....... + . .....+. -+..|.+.+.+++++.
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-----~Dv~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR-----LDVSDPGSCADAARTVVD 115 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEE-----CCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEE-----EeCCCHHHHHHHHHHHHH
Confidence 478999985 689999999999999999888654332111000 0 0 1222221 1445665555555443
Q ss_pred ---CCCEEEeCCC
Q psy15251 80 ---QCQAIHPGYG 89 (720)
Q Consensus 80 ---~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 116 ~~g~iD~lvnnAg 128 (293)
T 3rih_A 116 AFGALDVVCANAG 128 (293)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 6888875544
No 360
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=67.79 E-value=8.3 Score=37.39 Aligned_cols=35 Identities=17% Similarity=0.241 Sum_probs=29.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCC--cEEEEeeCCC
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKKMGI--RVVSVYSDID 42 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~~G~--~~v~v~s~~d 42 (720)
.+++||.| .|.++..+++.+.+.|+ +++++..+++
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~ 55 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL 55 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCC
Confidence 46899999 58999999999999999 8888865543
No 361
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=67.77 E-value=64 Score=32.57 Aligned_cols=110 Identities=9% Similarity=-0.079 Sum_probs=63.8
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
...||+|+|. |..+..+++.+++.|+++++. .++.... ..... ..-|.+++.+ ..+.++|+++
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~-V~p~~~g--~~~~G----------~~vy~sl~el---~~~~~~D~vi 69 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGG-VTPGKGG--TTHLG----------LPVFNTVREA---VAATGATASV 69 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEE-ECTTCTT--CEETT----------EEEESSHHHH---HHHHCCCEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEE-eCCCccc--ceeCC----------eeccCCHHHH---hhcCCCCEEE
Confidence 3469999997 999999999999999985533 2332110 00111 1134555544 3345788776
Q ss_pred eCCCCCcccHHHHHHHHHCCCeE-e-CCCHHHHHHhcCHHHHHHHHHHCCCCC
Q psy15251 86 PGYGFLSENAEFANAVEGNRLIF-V-GPSSEAIRNMGIKSTSKEIMIKAEVPV 136 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~~gl~~-~-Gp~~~~i~~~~DK~~~r~~l~~~Gvp~ 136 (720)
-..-. .........|.+.|++. + .+..-.. .+..++.+.+++.|+..
T Consensus 70 I~tP~-~~~~~~~~ea~~~Gi~~iVi~t~G~~~---~~~~~l~~~A~~~gv~l 118 (288)
T 2nu8_A 70 IYVPA-PFCKDSILEAIDAGIKLIITITEGIPT---LDMLTVKVKLDEAGVRM 118 (288)
T ss_dssp ECCCG-GGHHHHHHHHHHTTCSEEEECCCCCCH---HHHHHHHHHHHHHTCEE
T ss_pred EecCH-HHHHHHHHHHHHCCCCEEEEECCCCCH---HHHHHHHHHHHHcCCEE
Confidence 43321 12356677788888874 2 2221011 12346777888888844
No 362
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=67.73 E-value=12 Score=37.57 Aligned_cols=65 Identities=11% Similarity=-0.023 Sum_probs=45.2
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
++++|||.|+ |.++..+++.+.+.|+ . .. .....+ .....+..|.+.+.++.+..++|+|+
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~--~~-------~~~~~~--~~~~~D~~d~~~~~~~~~~~~~d~Vi 66 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG-------L--PG-------EDWVFV--SSKDADLTDTAQTRALFEKVQPTHVI 66 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC-------C--TT-------CEEEEC--CTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC-------c--cc-------cccccc--CceecccCCHHHHHHHHhhcCCCEEE
Confidence 4568999985 8999999999999998 0 00 011111 11223667888898999888899888
Q ss_pred eCCC
Q psy15251 86 PGYG 89 (720)
Q Consensus 86 pg~g 89 (720)
-.-+
T Consensus 67 h~A~ 70 (319)
T 4b8w_A 67 HLAA 70 (319)
T ss_dssp ECCC
T ss_pred ECce
Confidence 5544
No 363
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=67.69 E-value=6.6 Score=39.57 Aligned_cols=76 Identities=16% Similarity=0.202 Sum_probs=46.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-cccc--cEEEEeCCCCCcccccCHHHHHHHHHHc---
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALH-VKMA--DEAYRLEGKSSLDTYLNQAKILDIAVRS--- 79 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-~~~a--D~~~~i~~~~~~~~~~~~~~i~~~a~~~--- 79 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.+.+..... ..+. -..+.+ +..|.+.+.+++++.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRV-------DVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEe-------cCCCHHHHHHHHHHHHHH
Confidence 3578999984 6899999999999999998886432211000 0000 122222 445555555554443
Q ss_pred --CCCEEEeCCC
Q psy15251 80 --QCQAIHPGYG 89 (720)
Q Consensus 80 --~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 101 ~g~iD~lvnnAg 112 (277)
T 3gvc_A 101 FGGVDKLVANAG 112 (277)
T ss_dssp HSSCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 6898876554
No 364
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=67.03 E-value=3.9 Score=41.86 Aligned_cols=34 Identities=15% Similarity=0.102 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
.++++|+|+|+|..++.++..|++.|++++++..
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEec
Confidence 4568999999999999999999999999888844
No 365
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=66.91 E-value=43 Score=33.19 Aligned_cols=34 Identities=6% Similarity=-0.063 Sum_probs=29.1
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..|++||.|+ +.++..+++.+.+.|+++++++..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 4578999985 689999999999999999888644
No 366
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=66.87 E-value=27 Score=34.85 Aligned_cols=41 Identities=15% Similarity=0.079 Sum_probs=32.3
Q ss_pred CCCccC--CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCC
Q psy15251 1 MTIASC--VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDI 41 (720)
Q Consensus 1 m~~~~~--~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~ 41 (720)
|||+.. .-|++||.|+ +.|+..+++.+.+.|.++++++.+.
T Consensus 2 Mm~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~ 45 (261)
T 4h15_A 2 MMIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARAR 45 (261)
T ss_dssp CCCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cchhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCc
Confidence 777642 3478899885 5789999999999999998886543
No 367
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=66.52 E-value=8.4 Score=37.96 Aligned_cols=33 Identities=12% Similarity=0.082 Sum_probs=28.1
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 7 VLDSILIAN-RGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 7 ~~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s 39 (720)
..|++||.| .|.++..+++.+.+.|++++++..
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 357899998 478999999999999999888754
No 368
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=66.38 E-value=9.3 Score=42.81 Aligned_cols=85 Identities=13% Similarity=0.017 Sum_probs=57.3
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 9 DSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
++++|+|.|..+..+++.+.+.|+++++++.+++..... . ..+. + +..+. .+++-+.-.++|+++...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---~-~~i~-g------D~t~~-~~L~~agi~~ad~vi~~~ 416 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCND---H-VVVY-G------DATVG-QTLRQAGIDRASGIIVTT 416 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS---S-CEEE-S------CSSSS-THHHHHTTTSCSEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhc---C-CEEE-e------CCCCH-HHHHhcCccccCEEEEEC
Confidence 789999999999999999999999999998776654321 2 3333 2 22333 344556667789888777
Q ss_pred CCCcccHHHHHHHHHCC
Q psy15251 89 GFLSENAEFANAVEGNR 105 (720)
Q Consensus 89 g~lsE~~~~a~~~~~~g 105 (720)
+.-.+|......+++.|
T Consensus 417 ~~d~~ni~~~~~ak~l~ 433 (565)
T 4gx0_A 417 NDDSTNIFLTLACRHLH 433 (565)
T ss_dssp SCHHHHHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHHHHC
Confidence 64333444444555544
No 369
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=66.00 E-value=31 Score=35.33 Aligned_cols=33 Identities=12% Similarity=0.318 Sum_probs=28.8
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCC--cEEEEe
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMGI--RVVSVY 38 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G~--~~v~v~ 38 (720)
.|++||.|+|.|.++..+++.+++.|+ ++++++
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~d 65 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYD 65 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEE
Confidence 356899999999999999999999999 776664
No 370
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=65.74 E-value=13 Score=37.57 Aligned_cols=68 Identities=15% Similarity=0.066 Sum_probs=47.8
Q ss_pred EEEEEc-CcHHHHHHHHHHHHc--CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 10 SILIAN-RGEIACRIMRTAKKM--GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 10 ~iLI~~-~G~~a~~iira~~~~--G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
||||.| .|.++..+++.+.+. |++++++........ -. +.+. .+..|.+.+.+++++.++|+|+-
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~~-~~~~-------~D~~d~~~~~~~~~~~~~d~vih 68 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----GI-KFIT-------LDVSNRDEIDRAVEKYSIDAIFH 68 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----TC-CEEE-------CCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----Cc-eEEE-------ecCCCHHHHHHHHhhcCCcEEEE
Confidence 589998 589999999999998 899888854332211 01 2222 25567788888888778998885
Q ss_pred CCC
Q psy15251 87 GYG 89 (720)
Q Consensus 87 g~g 89 (720)
..+
T Consensus 69 ~a~ 71 (317)
T 3ajr_A 69 LAG 71 (317)
T ss_dssp CCC
T ss_pred CCc
Confidence 544
No 371
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=65.68 E-value=24 Score=35.83 Aligned_cols=109 Identities=9% Similarity=-0.023 Sum_probs=61.3
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEE-EEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVV-SVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v-~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
..+||+|+|. |..+..+++.+++.|++++ .| ++.... ...... .-|.+++.+ ..+.++|.+
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~V--nP~~~g--~~i~G~----------~vy~sl~el---~~~~~~Dv~ 68 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGV--TPGKGG--MEVLGV----------PVYDTVKEA---VAHHEVDAS 68 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE--CTTCTT--CEETTE----------EEESSHHHH---HHHSCCSEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEE--CCCCCC--ceECCE----------EeeCCHHHH---hhcCCCCEE
Confidence 3569999996 8889999999999999954 33 333210 111111 123454443 345678876
Q ss_pred EeCCCCCcccHHHHHHHHHCCCe-E-eCCCHHHHHHhcCHHHHHHHHHHCCCCC
Q psy15251 85 HPGYGFLSENAEFANAVEGNRLI-F-VGPSSEAIRNMGIKSTSKEIMIKAEVPV 136 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~gl~-~-~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~ 136 (720)
+-..-. .......+.|.+.|++ . +...--.. .+...+++.+++.|+.+
T Consensus 69 Ii~vp~-~~~~~~~~ea~~~Gi~~vVi~t~G~~~---~~~~~l~~~a~~~gi~v 118 (288)
T 1oi7_A 69 IIFVPA-PAAADAALEAAHAGIPLIVLITEGIPT---LDMVRAVEEIKALGSRL 118 (288)
T ss_dssp EECCCH-HHHHHHHHHHHHTTCSEEEECCSCCCH---HHHHHHHHHHHHHTCEE
T ss_pred EEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCH---HHHHHHHHHHHHcCCEE
Confidence 632211 1124556677778877 2 22210000 12456777888888844
No 372
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=65.58 E-value=6 Score=40.93 Aligned_cols=117 Identities=9% Similarity=0.017 Sum_probs=66.4
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
|+.||.|+|.|.++...++.+++. +++++++++. +... ...++++. + .. |.+.+.+ +...++|+|+
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~-~~~~-~~~~~~~~---~----~~-~~~~~~~---l~~~~~D~V~ 68 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA-FPAA-AEAIAGAY---G----CE-VRTIDAI---EAAADIDAVV 68 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS-SHHH-HHHHHHHT---T----CE-ECCHHHH---HHCTTCCEEE
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC-CHHH-HHHHHHHh---C----CC-cCCHHHH---hcCCCCCEEE
Confidence 345999999999999999999986 8888877532 2111 11122211 0 01 4565544 4455789888
Q ss_pred eCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCC
Q psy15251 86 PGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIP 138 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~ 138 (720)
...-. ......+..+.+.|..++.-.|-+.. ..+-..+.+++++.|+..--
T Consensus 69 i~tp~-~~h~~~~~~al~~gk~v~~EKP~~~~-~~~~~~l~~~a~~~g~~~~v 119 (331)
T 4hkt_A 69 ICTPT-DTHADLIERFARAGKAIFCEKPIDLD-AERVRACLKVVSDTKAKLMV 119 (331)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEECSCSCSS-HHHHHHHHHHHHHTTCCEEE
T ss_pred EeCCc-hhHHHHHHHHHHcCCcEEEecCCCCC-HHHHHHHHHHHHHcCCeEEE
Confidence 65421 23456677777888776642211110 01122345666777766543
No 373
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=65.52 E-value=9 Score=38.45 Aligned_cols=34 Identities=15% Similarity=0.093 Sum_probs=28.7
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999985 789999999999999998888543
No 374
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=65.08 E-value=8.9 Score=42.29 Aligned_cols=88 Identities=10% Similarity=0.084 Sum_probs=59.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCccccc----ccEEEEeCCCCCcccccCHHHHHHHHHHcCCCE
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKM----ADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQA 83 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~----aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~da 83 (720)
-||+.|.+.+..+..+++.++++|.+++.+.+.-.......++ .+..+.+ +..|...+.+.+++.++|.
T Consensus 348 GKrv~i~g~~~~~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~~~~~~~~i~-------~~~d~~el~~~i~~~~pDL 420 (492)
T 3u7q_A 348 GKRVMLYIGGLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLLY-------DDVTGYEFEEFVKRIKPDL 420 (492)
T ss_dssp TCEEEECBSSSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHTTSCTTCEEE-------ESCBHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHHhCCCCcEEE-------cCCCHHHHHHHHHhcCCcE
Confidence 4799999988899999999999999998875432111111111 1112222 2246778889999999999
Q ss_pred EEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 84 IHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 84 I~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
++.+ ..-....++.|+|++
T Consensus 421 ~ig~-------~~~~~ia~k~gIP~~ 439 (492)
T 3u7q_A 421 IGSG-------IKEKFIFQKMGIPFR 439 (492)
T ss_dssp EEEC-------HHHHHHHHHTTCCEE
T ss_pred EEeC-------cchhHHHHHcCCCEE
Confidence 8843 222456778899987
No 375
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=65.00 E-value=9.6 Score=37.49 Aligned_cols=76 Identities=13% Similarity=0.096 Sum_probs=46.2
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-ccccc--EEEEeCCCCCcccccCHHHHHHHHHHc---
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALH-VKMAD--EAYRLEGKSSLDTYLNQAKILDIAVRS--- 79 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-~~~aD--~~~~i~~~~~~~~~~~~~~i~~~a~~~--- 79 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.+.+..... ..+.+ ..+.+ +..|.+.+.+++++.
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL-------NVTNPESIEAVLKAITDE 80 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEE-------eCCCHHHHHHHHHHHHHH
Confidence 3578999985 6899999999999999998886443211100 00111 22222 445555555554433
Q ss_pred --CCCEEEeCCC
Q psy15251 80 --QCQAIHPGYG 89 (720)
Q Consensus 80 --~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 81 ~g~iD~lv~nAg 92 (248)
T 3op4_A 81 FGGVDILVNNAG 92 (248)
T ss_dssp HCCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 6898876554
No 376
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=64.96 E-value=9.3 Score=38.07 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=28.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3478999985 789999999999999998888543
No 377
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=64.95 E-value=6.1 Score=42.75 Aligned_cols=33 Identities=12% Similarity=0.044 Sum_probs=29.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCC--cEEEEee
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGI--RVVSVYS 39 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~--~~v~v~s 39 (720)
+.++|+|+|+|..++.+++.|++.|+ +++++..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~ 39 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFER 39 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEec
Confidence 45799999999999999999999999 8887743
No 378
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=64.91 E-value=7 Score=40.60 Aligned_cols=32 Identities=19% Similarity=0.319 Sum_probs=27.3
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcC-CcEEEEeeC
Q psy15251 9 DSILIANR-GEIACRIMRTAKKMG-IRVVSVYSD 40 (720)
Q Consensus 9 ~~iLI~~~-G~~a~~iira~~~~G-~~~v~v~s~ 40 (720)
++|||.|+ |.++..+++.+.+.| ++++++...
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 68999986 899999999999999 888888543
No 379
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=64.85 E-value=39 Score=33.25 Aligned_cols=144 Identities=11% Similarity=0.069 Sum_probs=74.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE-e
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH-P 86 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~-p 86 (720)
||-++...+|--..-.+.-|++.|++++++...-.... |.... ...+.+.+...|+..++.... .
T Consensus 5 MKvvvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~~------~s~~~--------h~~~~e~a~~~A~~LGIpl~~v~ 70 (237)
T 3rjz_A 5 ADVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENE------ESYMY--------HTINANLTDLQARALGIPLVKGF 70 (237)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC----------------------CCSSSHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCCC------Ccccc--------CCccHHHHHHHHHHcCCCEEEEE
Confidence 45555555665444445557788999988753221110 11000 012334566678888876543 2
Q ss_pred CCCC-CcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHHHHHhCCcEEEee
Q psy15251 87 GYGF-LSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQAERIGYPLMIKA 165 (720)
Q Consensus 87 g~g~-lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp 165 (720)
..+. -.|...+.+++.+.|+.-+ ..-.+..---|.+....|.++|+...-..- -.+.+++.+..-..||-.+|--
T Consensus 71 ~~g~~~~e~e~l~~~l~~~~i~~v--v~Gdi~s~yqr~r~e~vc~~~gl~~~~PLW--~~d~~~Ll~e~i~~G~~aiiv~ 146 (237)
T 3rjz_A 71 TQGEKEKEVEDLKRVLSGLKIQGI--VAGALASKYQRKRIEKVAKELGLEVYTPAW--GRDAKEYMRELLNLGFKIMVVG 146 (237)
T ss_dssp C------CHHHHHHHHTTSCCSEE--ECC---CCSHHHHHHHHHHHTTCEEECSSS--SCCHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCchHHHHHHHHHHHhcCCcEE--EECCcchHHHHHHHHHHHHHcCCEEEcccc--CCCHHHHHHHHHHCCCEEEEEE
Confidence 2221 1123455666666565432 122233233466778888999876433221 2466777666667899866655
Q ss_pred cCCC
Q psy15251 166 VRGG 169 (720)
Q Consensus 166 ~~g~ 169 (720)
++..
T Consensus 147 v~~~ 150 (237)
T 3rjz_A 147 VSAY 150 (237)
T ss_dssp EEST
T ss_pred EecC
Confidence 5443
No 380
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=64.75 E-value=7 Score=38.04 Aligned_cols=81 Identities=11% Similarity=-0.029 Sum_probs=49.2
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccc-ccc-EEEEeCCCCCcccccCHHHHHHHHH
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVK-MAD-EAYRLEGKSSLDTYLNQAKILDIAV 77 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~-~aD-~~~~i~~~~~~~~~~~~~~i~~~a~ 77 (720)
|+++. ..|++||.|+ |.++..+++.+.+.|++++++..+.+....... ... +.+. -+..+.+.+.++++
T Consensus 1 m~~~~-~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------~D~~~~~~~~~~~~ 72 (244)
T 1cyd_A 1 MKLNF-SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVC-------VDLGDWDATEKALG 72 (244)
T ss_dssp --CCC-TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEE-------CCTTCHHHHHHHHT
T ss_pred CccCC-CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEE-------ecCCCHHHHHHHHH
Confidence 44433 3468999985 789999999999999998887543221100000 011 2222 25567777777776
Q ss_pred Hc-CCCEEEeCCC
Q psy15251 78 RS-QCQAIHPGYG 89 (720)
Q Consensus 78 ~~-~~daI~pg~g 89 (720)
+. ++|.++-.-|
T Consensus 73 ~~~~id~vi~~Ag 85 (244)
T 1cyd_A 73 GIGPVDLLVNNAA 85 (244)
T ss_dssp TCCCCSEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 54 4788875554
No 381
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=64.15 E-value=23 Score=35.20 Aligned_cols=76 Identities=13% Similarity=0.063 Sum_probs=46.5
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCccc-ccc--cEEEEeCCCCCcccccCHHHHHHHHHHc---
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHV-KMA--DEAYRLEGKSSLDTYLNQAKILDIAVRS--- 79 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~-~~a--D~~~~i~~~~~~~~~~~~~~i~~~a~~~--- 79 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.+.+...... .+. -..+.+ +..+.+.+.+++++.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVV-------DLTNEVSVRALIDFTIDT 82 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEEC-------CCCCHHHHHHHHHHHHHH
Confidence 3578999985 78999999999999999888865443211100 000 112222 445555555555433
Q ss_pred --CCCEEEeCCC
Q psy15251 80 --QCQAIHPGYG 89 (720)
Q Consensus 80 --~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 83 ~g~id~lv~nAg 94 (271)
T 3tzq_B 83 FGRLDIVDNNAA 94 (271)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 6888875544
No 382
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=64.15 E-value=8.8 Score=37.49 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=28.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
+|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 478999985 789999999999999998888543
No 383
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=64.12 E-value=5.6 Score=41.43 Aligned_cols=75 Identities=15% Similarity=0.072 Sum_probs=48.2
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEeeCCCCCCcccccccEEEEeCCCCCcccccC-HHHHHHHHHHcCCCEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGI-RVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLN-QAKILDIAVRSQCQAI 84 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~-~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~-~~~i~~~a~~~~~daI 84 (720)
.-++|||.|.|.++..+++.++.+|. +++++..+++.......++|+.+.. . + .+ .+.+.++. ..++|.+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~----~--~-~~~~~~~~~~~-~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNP----L--E-EDLLEVVRRVT-GSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECT----T--T-SCHHHHHHHHH-SSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCc----C--c-cCHHHHHHHhc-CCCCCEE
Confidence 34689999999999999999999999 8888854433221112226665421 1 1 12 23444444 5578998
Q ss_pred EeCCC
Q psy15251 85 HPGYG 89 (720)
Q Consensus 85 ~pg~g 89 (720)
+-..|
T Consensus 236 id~~g 240 (343)
T 2dq4_A 236 LEFSG 240 (343)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 86665
No 384
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=63.91 E-value=13 Score=36.91 Aligned_cols=33 Identities=15% Similarity=0.046 Sum_probs=28.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.| .|.++..+++.+.+.|+++++++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899998 4789999999999999998887543
No 385
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=63.81 E-value=12 Score=40.74 Aligned_cols=150 Identities=19% Similarity=0.139 Sum_probs=86.6
Q ss_pred CEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCccc--cc-c--cEEEE------eCC---CCCcccccCHHHHH
Q psy15251 9 DSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHV--KM-A--DEAYR------LEG---KSSLDTYLNQAKIL 73 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~--~~-a--D~~~~------i~~---~~~~~~~~~~~~i~ 73 (720)
-||-|+|.|.++..+++.+.+. |++++++++.....+... ++ - +.... ++. .....-|.|.+.
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ee-- 101 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDL-- 101 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHH--
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHH--
Confidence 4899999999999999888765 788888864322111100 00 0 00000 000 000113456554
Q ss_pred HHHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCCCHHHHHHH
Q psy15251 74 DIAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQNEEILMEQ 153 (720)
Q Consensus 74 ~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~s~~e~~~~ 153 (720)
++...++|+|+-..+...-....+..+.++|..++.-+.+.. ...-..+.++++++|+..-..+-......-++.++
T Consensus 102 -LL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~--~~eg~eL~~~A~e~Gvvl~~~~gdqp~~~~eLv~~ 178 (446)
T 3upl_A 102 -ILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEAD--VTIGPYLKAQADKQGVIYSLGAGDEPSSCMELIEF 178 (446)
T ss_dssp -HHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHH--HHHHHHHHHHHHHHTCCEEECTTSHHHHHHHHHHH
T ss_pred -HhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCcccC--HHHHHHHHHHHHHhCCeeeecCCcchHHHHHHHHH
Confidence 444567999985543211124667788889999885344322 12345788889999987643321001224577888
Q ss_pred HHHhCCcEEE
Q psy15251 154 AERIGYPLMI 163 (720)
Q Consensus 154 ~~~ig~Pvvv 163 (720)
++.+||.+|.
T Consensus 179 a~~~G~~~v~ 188 (446)
T 3upl_A 179 VSALGYEVVS 188 (446)
T ss_dssp HHHTTCEEEE
T ss_pred HHhCCCeEEE
Confidence 8899998665
No 386
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=63.71 E-value=22 Score=34.85 Aligned_cols=77 Identities=6% Similarity=-0.016 Sum_probs=46.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCccc-ccccEEEEeCCCCCcccccCHHHHHHHHHHc-----C
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHV-KMADEAYRLEGKSSLDTYLNQAKILDIAVRS-----Q 80 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~-~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~ 80 (720)
.|++||.|+ |.++..+++.+.+.|++++++..+........ .+......+. -+..+.+.+.+++++. +
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAP-----ADVTSEKDVQTALALAKGKFGR 86 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEE-----CCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEE-----cCCCCHHHHHHHHHHHHHHCCC
Confidence 478999984 78999999999999999988865433211000 0011111111 1445555555555433 6
Q ss_pred CCEEEeCCC
Q psy15251 81 CQAIHPGYG 89 (720)
Q Consensus 81 ~daI~pg~g 89 (720)
+|.++-..|
T Consensus 87 id~li~~Ag 95 (265)
T 2o23_A 87 VDVAVNCAG 95 (265)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 898886554
No 387
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=63.71 E-value=42 Score=32.78 Aligned_cols=65 Identities=15% Similarity=0.308 Sum_probs=47.2
Q ss_pred EEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 10 SILIAN-RGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 10 ~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
++||.| .|.++..+++.+.+ |++++++...+... .. +. .+..+.+.+.++.+..++|.|+-..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-------~~-~~-------~Dl~~~~~~~~~~~~~~~d~vi~~a 65 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-------GG-YK-------LDLTDFPRLEDFIIKKRPDVIINAA 65 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-------TC-EE-------CCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-------CC-ce-------eccCCHHHHHHHHHhcCCCEEEECC
Confidence 689998 58999999999995 99988886544211 11 22 2556777888888777899888665
Q ss_pred CC
Q psy15251 89 GF 90 (720)
Q Consensus 89 g~ 90 (720)
+.
T Consensus 66 ~~ 67 (273)
T 2ggs_A 66 AM 67 (273)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 388
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=63.70 E-value=22 Score=35.29 Aligned_cols=72 Identities=17% Similarity=0.145 Sum_probs=44.5
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc-----C
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS-----Q 80 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~ 80 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.+..... .+. .+. .+..+.+.+.+++++. +
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----~~~--~~~-----~Dv~~~~~~~~~~~~~~~~~g~ 94 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----ADL--HLP-----GDLREAAYADGLPGAVAAGLGR 94 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----CSE--ECC-----CCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----hhh--ccC-----cCCCCHHHHHHHHHHHHHhcCC
Confidence 3478999985 68999999999999999887754322211 111 111 2344555544444332 6
Q ss_pred CCEEEeCCCC
Q psy15251 81 CQAIHPGYGF 90 (720)
Q Consensus 81 ~daI~pg~g~ 90 (720)
+|.++-.-|.
T Consensus 95 iD~lvnnAg~ 104 (266)
T 3uxy_A 95 LDIVVNNAGV 104 (266)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8988865553
No 389
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=63.67 E-value=13 Score=40.65 Aligned_cols=87 Identities=6% Similarity=0.000 Sum_probs=54.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-------ccc--ccEEEEeCCCCCcccccCHHHHHHHHHH
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALH-------VKM--ADEAYRLEGKSSLDTYLNQAKILDIAVR 78 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-------~~~--aD~~~~i~~~~~~~~~~~~~~i~~~a~~ 78 (720)
-||++|.+.+..+..+.+.++++|++++.+.+........ ... .+-.+..+ .|...+.+++++
T Consensus 312 gkrv~i~~~~~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~--------~d~~~l~~~i~~ 383 (458)
T 1mio_B 312 GKKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVE--------GDFFDVHQWIKN 383 (458)
T ss_dssp TCEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEES--------CBHHHHHHHHHH
T ss_pred CCEEEEEcCchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEEC--------CCHHHHHHHHHh
Confidence 5799999999999999999999999999886543211100 000 11122211 366677777888
Q ss_pred cCCCEEEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 79 SQCQAIHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 79 ~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
.++|.++.+.. + ...+.+.|++++
T Consensus 384 ~~pDl~ig~~~---~----~~~a~k~gip~~ 407 (458)
T 1mio_B 384 EGVDLLISNTY---G----KFIAREENIPFV 407 (458)
T ss_dssp SCCSEEEESGG---G----HHHHHHHTCCEE
T ss_pred cCCCEEEeCcc---h----HHHHHHcCCCEE
Confidence 88887774331 1 223345566664
No 390
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=63.56 E-value=17 Score=37.97 Aligned_cols=104 Identities=10% Similarity=-0.014 Sum_probs=50.0
Q ss_pred ccCCCCEEEEEcC------cH---HHHHHHHHHHHcCCcEEEEeeCCCCCC-ccc-ccccEEEEeCCCCCcc-ccc---C
Q psy15251 4 ASCVLDSILIANR------GE---IACRIMRTAKKMGIRVVSVYSDIDADA-LHV-KMADEAYRLEGKSSLD-TYL---N 68 (720)
Q Consensus 4 ~~~~~~~iLI~~~------G~---~a~~iira~~~~G~~~v~v~s~~d~~~-~~~-~~aD~~~~i~~~~~~~-~~~---~ 68 (720)
...+|.|||++.. |. ....+++.+++.|+++.++........ ... ......+.++...... -.. .
T Consensus 16 ~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPAT 95 (406)
T ss_dssp -----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHH
T ss_pred cCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHH
Confidence 3333447777763 22 366889999999999988865543320 000 0000111121000000 011 1
Q ss_pred HHHHHHHHHHcCCCEEEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 69 QAKILDIAVRSQCQAIHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 69 ~~~i~~~a~~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
...+.+++++.++|.||.......- . ...++...+++++
T Consensus 96 ~~~l~~~l~~~~~Dii~~~~~~~~~-~-~~~~~~~~~~~~i 134 (406)
T 2gek_A 96 HRKVKKWIAEGDFDVLHIHEPNAPS-L-SMLALQAAEGPIV 134 (406)
T ss_dssp HHHHHHHHHHHCCSEEEEECCCSSS-H-HHHHHHHEESSEE
T ss_pred HHHHHHHHHhcCCCEEEECCccchH-H-HHHHHHhcCCCEE
Confidence 2567888888999999865543221 1 2233444466654
No 391
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=63.54 E-value=14 Score=36.31 Aligned_cols=77 Identities=18% Similarity=0.169 Sum_probs=48.4
Q ss_pred CCEEEEE--cCcHHHHHHHHHHHHc--CCcEEEEeeCCCCCCccccccc----EEEEeCCCCCcccccC----HHHHHHH
Q psy15251 8 LDSILIA--NRGEIACRIMRTAKKM--GIRVVSVYSDIDADALHVKMAD----EAYRLEGKSSLDTYLN----QAKILDI 75 (720)
Q Consensus 8 ~~~iLI~--~~G~~a~~iira~~~~--G~~~v~v~s~~d~~~~~~~~aD----~~~~i~~~~~~~~~~~----~~~i~~~ 75 (720)
|+||+++ |.|..+..+++++.+. ++++++|.++.+... ....|. ..+.+.+ .++.+ -+.+++.
T Consensus 22 ~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~-~~~~A~~~gIp~~~~~~----~~~~~r~~~~~~~~~~ 96 (229)
T 3auf_A 22 MIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAY-GLERARRAGVDALHMDP----AAYPSRTAFDAALAER 96 (229)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCH-HHHHHHHTTCEEEECCG----GGSSSHHHHHHHHHHH
T ss_pred CcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchH-HHHHHHHcCCCEEEECc----ccccchhhccHHHHHH
Confidence 4578888 8999999999999876 678888888743221 122222 1222221 12222 2567788
Q ss_pred HHHcCCCEEEe-CCC
Q psy15251 76 AVRSQCQAIHP-GYG 89 (720)
Q Consensus 76 a~~~~~daI~p-g~g 89 (720)
.++.++|.|+- +|+
T Consensus 97 l~~~~~Dliv~agy~ 111 (229)
T 3auf_A 97 LQAYGVDLVCLAGYM 111 (229)
T ss_dssp HHHTTCSEEEESSCC
T ss_pred HHhcCCCEEEEcChh
Confidence 88889996653 554
No 392
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=63.54 E-value=8.6 Score=38.82 Aligned_cols=77 Identities=13% Similarity=0.122 Sum_probs=50.0
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-cccccEEEEeCCCCCcccccCHHHHHHHHHHc-CCCEE
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALH-VKMADEAYRLEGKSSLDTYLNQAKILDIAVRS-QCQAI 84 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-~~daI 84 (720)
.|++||.|+ |.|+..+++.+.+.|+++++++.+.+..... ..+......+. -+..+.+.+.+++++. ++|.+
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~v~~~~~~~~~iD~l 90 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRE-----LDLQDLSSVRRFADGVSGADVL 90 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEE-----CCTTCHHHHHHHHHTCCCEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEE-----cCCCCHHHHHHHHHhcCCCCEE
Confidence 478999985 7899999999999999988886443211100 01111222221 2556788888888876 67877
Q ss_pred EeCCC
Q psy15251 85 HPGYG 89 (720)
Q Consensus 85 ~pg~g 89 (720)
+-.-|
T Consensus 91 v~nAg 95 (291)
T 3rd5_A 91 INNAG 95 (291)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 75544
No 393
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=63.52 E-value=12 Score=37.24 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=27.5
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q psy15251 6 CVLDSILIANR-GEIACRIMRTAKKMGIRVVSVY 38 (720)
Q Consensus 6 ~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~ 38 (720)
.|.|++||.|+ +.++..+++.+.+.|+++++++
T Consensus 24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~ 57 (267)
T 4iiu_A 24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHY 57 (267)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 35678999985 7899999999999999987764
No 394
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=63.37 E-value=11 Score=37.57 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=28.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ |.++..+++.+.+.|++++++..+
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~ 65 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCART 65 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 478999984 789999999999999998887543
No 395
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=63.27 E-value=3.8 Score=44.94 Aligned_cols=72 Identities=13% Similarity=-0.006 Sum_probs=45.8
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
||+|+|.|..+..+++.|.+.|+++++++.+++.-.......|-.+..+ +-.+. .+++-|.-.++|+++...
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~G------d~~~~-~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNG------HASHP-DVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEES------CTTCH-HHHHHHTTTTCSEEEECC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEE------cCCCH-HHHHhcCCCcCCEEEEEc
Confidence 7999999999999999999999999999655443221111124333333 22333 344445555677776443
No 396
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=63.17 E-value=18 Score=37.35 Aligned_cols=72 Identities=8% Similarity=-0.098 Sum_probs=48.6
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcC-----CcEEEEeeCCCCCCccccccc-EEEEeCCCCCcccccCHHHHHHHHHHcC-
Q psy15251 9 DSILIANR-GEIACRIMRTAKKMG-----IRVVSVYSDIDADALHVKMAD-EAYRLEGKSSLDTYLNQAKILDIAVRSQ- 80 (720)
Q Consensus 9 ~~iLI~~~-G~~a~~iira~~~~G-----~~~v~v~s~~d~~~~~~~~aD-~~~~i~~~~~~~~~~~~~~i~~~a~~~~- 80 (720)
++|||.|+ |.++..+++.+.+.| ++++++......... .... +.+. .+..|.+.+.++.+..+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~--~~~~~~~~~-------~Dl~d~~~~~~~~~~~~~ 72 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWH--EDNPINYVQ-------CDISDPDDSQAKLSPLTD 72 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCC--CSSCCEEEE-------CCTTSHHHHHHHHTTCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcccc--ccCceEEEE-------eecCCHHHHHHHHhcCCC
Confidence 48999985 899999999999999 998888654433220 0011 2222 25567777877776655
Q ss_pred CCEEEeCCC
Q psy15251 81 CQAIHPGYG 89 (720)
Q Consensus 81 ~daI~pg~g 89 (720)
+|+|+-..+
T Consensus 73 ~d~vih~a~ 81 (364)
T 2v6g_A 73 VTHVFYVTW 81 (364)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 898875544
No 397
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=63.16 E-value=16 Score=36.04 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=28.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999985 789999999999999998887543
No 398
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=63.15 E-value=58 Score=34.95 Aligned_cols=88 Identities=11% Similarity=0.111 Sum_probs=54.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCC-cccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADA-LHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~-~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
.|||+|+|.|..+...++.++++|++++..++....+. .... ....+.++ . .+.+.+ . ++|.|+.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g------~-~~~~~~----~--~~d~vV~ 70 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTG------S-LNDEWL----M--AADLIVA 70 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEES------S-CCHHHH----H--TCSEEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEEC------C-CcHHHh----c--cCCEEEe
Confidence 46899999999999999999999999988865443321 1111 12223222 1 122222 2 6888887
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
..+....++.+. .+.+.++++++
T Consensus 71 s~gi~~~~p~~~-~a~~~~~~v~~ 93 (439)
T 2x5o_A 71 SPGIALAHPSLS-AAADAGIEIVG 93 (439)
T ss_dssp CTTSCTTCHHHH-HHHHTTCEEEC
T ss_pred CCCCCCCCHHHH-HHHHCCCcEEE
Confidence 766543455433 34567888773
No 399
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=63.14 E-value=12 Score=37.60 Aligned_cols=76 Identities=20% Similarity=0.231 Sum_probs=45.6
Q ss_pred CCEEEEEcC-cH--HHHHHHHHHHHcCCcEEEEeeCCCCCCc---cccccc-EEEEeCCCCCcccccCHHHHHHHHHHc-
Q psy15251 8 LDSILIANR-GE--IACRIMRTAKKMGIRVVSVYSDIDADAL---HVKMAD-EAYRLEGKSSLDTYLNQAKILDIAVRS- 79 (720)
Q Consensus 8 ~~~iLI~~~-G~--~a~~iira~~~~G~~~v~v~s~~d~~~~---~~~~aD-~~~~i~~~~~~~~~~~~~~i~~~a~~~- 79 (720)
.|++||.|+ |. ++..+++.+.+.|+++++++.+...... .....+ ..+.+ +..+.+.+.+++++.
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~-------Dl~~~~~v~~~~~~~~ 98 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPC-------DVISDQEIKDLFVELG 98 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEEC-------CTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEe-------ecCCHHHHHHHHHHHH
Confidence 478999984 33 9999999999999998888654410000 000111 22222 445555555555443
Q ss_pred ----CCCEEEeCCCC
Q psy15251 80 ----QCQAIHPGYGF 90 (720)
Q Consensus 80 ----~~daI~pg~g~ 90 (720)
++|.++-..|.
T Consensus 99 ~~~g~id~li~nAg~ 113 (280)
T 3nrc_A 99 KVWDGLDAIVHSIAF 113 (280)
T ss_dssp HHCSSCCEEEECCCC
T ss_pred HHcCCCCEEEECCcc
Confidence 58888866554
No 400
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=63.07 E-value=6.4 Score=40.29 Aligned_cols=32 Identities=16% Similarity=0.058 Sum_probs=28.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
+..|+|+|+|..++.++..|++.|++|+++..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~ 33 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEEC
Confidence 35899999999999999999999999888843
No 401
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=63.05 E-value=17 Score=39.41 Aligned_cols=111 Identities=14% Similarity=0.055 Sum_probs=63.7
Q ss_pred EEEEEcCcHHHHHHHHHHHH----------cCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy15251 10 SILIANRGEIACRIMRTAKK----------MGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS 79 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~----------~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~ 79 (720)
||.|+|.|.++..+++.+++ .+++++++........ ...++. ..-|.|.+.+ +...
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~--~~~~~~---------~~~~~d~~el---l~d~ 77 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKA--EALAGG---------LPLTTNPFDV---VDDP 77 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHH--HHHHTT---------CCEESCTHHH---HTCT
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHh--hhhccc---------CcccCCHHHH---hcCC
Confidence 89999999999988877653 4677777753221111 111110 1123455544 4456
Q ss_pred CCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCC
Q psy15251 80 QCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPV 136 (720)
Q Consensus 80 ~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~ 136 (720)
++|+|+-..+...-...+...+.++|..++...+... ..+=..+.+++++.|+..
T Consensus 78 diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenkal~--a~~~~eL~~~A~~~gv~l 132 (444)
T 3mtj_A 78 EIDIVVELIGGLEPARELVMQAIANGKHVVTANKHLV--AKYGNEIFAAAQAKGVMV 132 (444)
T ss_dssp TCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHHHH--HHHHHHHHHHHHHHTCCE
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCcccC--HHHHHHHHHHHHHhCCeE
Confidence 7899886544222235677788889999887666322 112234445555555543
No 402
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=63.03 E-value=6.1 Score=42.59 Aligned_cols=32 Identities=3% Similarity=0.137 Sum_probs=27.2
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcC--CcEEEEe
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMG--IRVVSVY 38 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G--~~~v~v~ 38 (720)
|.|||+|+|+|..++.+++.+++++ ++++++.
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~ 34 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLIS 34 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHhccCcCCeEEEEc
Confidence 4579999999999999999999976 7777773
No 403
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=62.91 E-value=14 Score=36.38 Aligned_cols=39 Identities=8% Similarity=0.083 Sum_probs=30.5
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|.|+. ..|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 1 m~~~l-~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 1 MDLGI-QGKLAVVTAGSSGLGFASALELARNGARLLLFSRN 40 (260)
T ss_dssp CCCCC-TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCC-CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 44432 3478999985 789999999999999998887543
No 404
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=62.89 E-value=13 Score=37.04 Aligned_cols=77 Identities=10% Similarity=0.035 Sum_probs=47.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccc-----c-ccEEEEeCCCCCcccccCHHHHHHHHHHc-
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVK-----M-ADEAYRLEGKSSLDTYLNQAKILDIAVRS- 79 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~-----~-aD~~~~i~~~~~~~~~~~~~~i~~~a~~~- 79 (720)
.|++||.|+ +.++..+++.+.+.|+++++++.+.+....... . ......+. .+..+.+.+.++.++.
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV-----ADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEE-----CCTTSHHHHHHHHHHCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEe-----cCCCCHHHHHHHHHhcC
Confidence 478999985 789999999999999999888543321100000 0 01111111 2455667777777776
Q ss_pred CCCEEEeCCC
Q psy15251 80 QCQAIHPGYG 89 (720)
Q Consensus 80 ~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 85 ~id~lv~nAg 94 (267)
T 3t4x_A 85 KVDILINNLG 94 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 5888775544
No 405
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=62.69 E-value=5.9 Score=40.81 Aligned_cols=32 Identities=6% Similarity=0.103 Sum_probs=28.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVY 38 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~ 38 (720)
+..+|+|+|+|..++.++..+++.|++++++.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie 44 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFE 44 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 34689999999999999999999999988884
No 406
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=62.67 E-value=6.9 Score=40.89 Aligned_cols=90 Identities=9% Similarity=-0.026 Sum_probs=55.0
Q ss_pred CEEEEEcCcHHHH-HHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 9 DSILIANRGEIAC-RIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 9 ~~iLI~~~G~~a~-~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
-||.|+|.|.++. ..++.+++. ++++++|++.. . ...++++. .+ +....|.+.+.++ ...++|+|+.
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~--~~~~a~~~-~~---~~~~~~~~~~~ll---~~~~~D~V~i 71 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--V--NEKAAAPF-KE---KGVNFTADLNELL---TDPEIELITI 71 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--C--CHHHHHHH-HT---TTCEEESCTHHHH---SCTTCCEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--H--HHHHHHhh-CC---CCCeEECCHHHHh---cCCCCCEEEE
Confidence 3999999999998 567777666 88888886533 1 12222210 00 0112345655544 3557998886
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
.... ......+..+.++|..++.
T Consensus 72 ~tp~-~~h~~~~~~al~aGk~Vl~ 94 (349)
T 3i23_A 72 CTPA-HTHYDLAKQAILAGKSVIV 94 (349)
T ss_dssp CSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred eCCc-HHHHHHHHHHHHcCCEEEE
Confidence 5432 2345677777888887764
No 407
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=62.56 E-value=4.1 Score=42.72 Aligned_cols=89 Identities=11% Similarity=0.023 Sum_probs=53.9
Q ss_pred CEEEEEcCcHHHH-HHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 9 DSILIANRGEIAC-RIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 9 ~~iLI~~~G~~a~-~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
.||.|+|.|.++. ..++++++. |++++++++.....+ ..++++. -+ ..|.+.+. ++...++|+|+.
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~--~~~a~~~-g~------~~~~~~~~---ll~~~~~D~V~i 95 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRA--KRFTERF-GG------EPVEGYPA---LLERDDVDAVYV 95 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHH--HHHHHHH-CS------EEEESHHH---HHTCTTCSEEEE
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHH--HHHHHHc-CC------CCcCCHHH---HhcCCCCCEEEE
Confidence 4899999999998 689999888 888887764321111 1122211 01 12345444 344567898886
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
..- -......+..+.++|..++.
T Consensus 96 ~tp-~~~h~~~~~~al~aGk~Vl~ 118 (350)
T 3rc1_A 96 PLP-AVLHAEWIDRALRAGKHVLA 118 (350)
T ss_dssp CCC-GGGHHHHHHHHHHTTCEEEE
T ss_pred CCC-cHHHHHHHHHHHHCCCcEEE
Confidence 542 12345667777778877654
No 408
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=62.47 E-value=14 Score=38.34 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=56.9
Q ss_pred CCCEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 7 VLDSILIANRGEIACR-IMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~-iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.|-||-|+|.|.++.. .+.++++. ++++++|++ .+... ...++++. -+ ...|.|.+.++ ...++|+|
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d-~~~~~-a~~~a~~~-g~-----~~~y~d~~ell---~~~~iDaV 90 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIAS-RDLTR-AREMADRF-SV-----PHAFGSYEEML---ASDVIDAV 90 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEEC-SSHHH-HHHHHHHH-TC-----SEEESSHHHHH---HCSSCSEE
T ss_pred CccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEEC-CCHHH-HHHHHHHc-CC-----CeeeCCHHHHh---cCCCCCEE
Confidence 3559999999999975 67888876 788888864 22111 11223221 01 12356666544 45678988
Q ss_pred EeCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 85 HPGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
+...- -.....++..+.++|..++.
T Consensus 91 ~I~tP-~~~H~~~~~~al~aGkhVl~ 115 (350)
T 4had_A 91 YIPLP-TSQHIEWSIKAADAGKHVVC 115 (350)
T ss_dssp EECSC-GGGHHHHHHHHHHTTCEEEE
T ss_pred EEeCC-CchhHHHHHHHHhcCCEEEE
Confidence 86542 22346777788888888764
No 409
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=62.46 E-value=27 Score=35.58 Aligned_cols=73 Identities=12% Similarity=0.099 Sum_probs=47.0
Q ss_pred EEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCccc-cc----cc--EEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy15251 10 SILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHV-KM----AD--EAYRLEGKSSLDTYLNQAKILDIAVRSQC 81 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~-~~----aD--~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 81 (720)
+|||.|+ |.++..+++.+.+.|++++++........... .+ .. ..+. .+..+.+.+.++.+..++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~Dl~~~~~~~~~~~~~~~ 74 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVE-------GDIRNEALMTEILHDHAI 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEE-------CCTTCHHHHHHHHHHTTC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEE-------ccCCCHHHHHHHhhccCC
Confidence 7899985 89999999999999999988753221111000 00 01 1222 255677777777777789
Q ss_pred CEEEeCCC
Q psy15251 82 QAIHPGYG 89 (720)
Q Consensus 82 daI~pg~g 89 (720)
|+|+-.-+
T Consensus 75 D~vih~A~ 82 (338)
T 1udb_A 75 DTVIHFAG 82 (338)
T ss_dssp SEEEECCS
T ss_pred CEEEECCc
Confidence 98875444
No 410
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=62.31 E-value=1e+02 Score=31.04 Aligned_cols=116 Identities=14% Similarity=0.189 Sum_probs=75.6
Q ss_pred CcccccCHHHHHHHHHHcCCCEEE--eCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCc
Q psy15251 62 SLDTYLNQAKILDIAVRSQCQAIH--PGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPG 139 (720)
Q Consensus 62 ~~~~~~~~~~i~~~a~~~~~daI~--pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~ 139 (720)
..+.+.+...+++.+++.++.++. |+.|... ..|...+++.|+.| .+-..+-+.+++.|+-+.++
T Consensus 103 ~~DP~~~~g~~Le~lk~~Gf~Gv~N~ptvglid--G~fr~~LEE~gm~~-----------~~eve~I~~A~~~gL~Ti~~ 169 (286)
T 2p10_A 103 GTDPFMVMSTFLRELKEIGFAGVQNFPTVGLID--GLFRQNLEETGMSY-----------AQEVEMIAEAHKLDLLTTPY 169 (286)
T ss_dssp TTCTTCCHHHHHHHHHHHTCCEEEECSCGGGCC--HHHHHHHHHTTCCH-----------HHHHHHHHHHHHTTCEECCE
T ss_pred CcCCCcCHHHHHHHHHHhCCceEEECCCccccc--chhhhhHhhcCCCH-----------HHHHHHHHHHHHCCCeEEEe
Confidence 456778889999999999999884 5555544 78999999999863 13335667889999999986
Q ss_pred ccCCCCCHHHHHHHHHHhCCc-EEEeecC-CCCCcceEEeCCHHHHHHHHHHHHHHHH
Q psy15251 140 YHGEDQNEEILMEQAERIGYP-LMIKAVR-GGGGKGMRIVRDSANFLAQLRSAQRESQ 195 (720)
Q Consensus 140 ~~~~~~s~~e~~~~~~~ig~P-vvvKp~~-g~Gg~Gv~~v~~~~el~~~~~~~~~~~~ 195 (720)
+.|.+++.+.+ +.|-- +++-|-. -+|..|....-+.++..+.++++.+.++
T Consensus 170 ----v~~~eeA~amA-~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~ 222 (286)
T 2p10_A 170 ----VFSPEDAVAMA-KAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAAR 222 (286)
T ss_dssp ----ECSHHHHHHHH-HHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHH
T ss_pred ----cCCHHHHHHHH-HcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHH
Confidence 45889988765 45522 4444442 2345666666677776666666555444
No 411
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=62.30 E-value=3.5 Score=43.25 Aligned_cols=90 Identities=13% Similarity=0.117 Sum_probs=55.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 8 LDSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
+.||.|+|.|.++...++.+++. |++++++++. +... ...+++. +-+ ..|.+.+.+ +...++|+|+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~-~~~~-~~~~~~~-~g~------~~~~~~~~~---l~~~~~D~V~i 72 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR-TEDK-REKFGKR-YNC------AGDATMEAL---LAREDVEMVII 72 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS-SHHH-HHHHHHH-HTC------CCCSSHHHH---HHCSSCCEEEE
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC-CHHH-HHHHHHH-cCC------CCcCCHHHH---hcCCCCCEEEE
Confidence 34899999999999999999988 8888877542 2111 1112221 101 125565544 44567898875
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
..-. ......+..+.+.|..++.
T Consensus 73 ~tp~-~~h~~~~~~al~~gk~vl~ 95 (354)
T 3db2_A 73 TVPN-DKHAEVIEQCARSGKHIYV 95 (354)
T ss_dssp CSCT-TSHHHHHHHHHHTTCEEEE
T ss_pred eCCh-HHHHHHHHHHHHcCCEEEE
Confidence 5422 2345666667777776653
No 412
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=62.29 E-value=16 Score=37.28 Aligned_cols=34 Identities=6% Similarity=0.211 Sum_probs=27.7
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHH-cCCcEEEEeeC
Q psy15251 7 VLDSILIAN-RGEIACRIMRTAKK-MGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~-~G~~a~~iira~~~-~G~~~v~v~s~ 40 (720)
++-||.|+| .|..+..+++++.+ -+++.+++...
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~ 55 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVR 55 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCC
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 445999999 89999999999875 48898888644
No 413
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=62.24 E-value=39 Score=33.36 Aligned_cols=31 Identities=29% Similarity=0.438 Sum_probs=26.3
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 9 DSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
-||.|+|.|.++..+++.+.+.+.++++++.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d 34 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIE 34 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEe
Confidence 4899999999999999999998777776543
No 414
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=62.14 E-value=11 Score=38.24 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=27.7
Q ss_pred CCEEEEEcC-cH--HHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GE--IACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~--~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ |. ++..+++.+.+.|+++++++.+
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~ 66 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG 66 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 578999986 34 9999999999999998887544
No 415
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=62.02 E-value=12 Score=36.85 Aligned_cols=34 Identities=15% Similarity=0.064 Sum_probs=28.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
+.|++||.|+ |.++..+++.+.+.|++++++..+
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999984 789999999999999998888543
No 416
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=61.93 E-value=6.9 Score=42.97 Aligned_cols=31 Identities=10% Similarity=0.079 Sum_probs=28.3
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcC---CcEEEEee
Q psy15251 9 DSILIANRGEIACRIMRTAKKMG---IRVVSVYS 39 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G---~~~v~v~s 39 (720)
.+|+|+|+|..++.++..+++.| ++++++..
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~ 69 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQ 69 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEC
Confidence 79999999999999999999998 99888843
No 417
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=61.83 E-value=11 Score=37.61 Aligned_cols=34 Identities=12% Similarity=0.048 Sum_probs=28.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
+.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999985 789999999999999998888543
No 418
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=61.58 E-value=12 Score=39.35 Aligned_cols=50 Identities=16% Similarity=0.071 Sum_probs=37.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCC-CcccccccEEEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDAD-ALHVKMADEAYR 56 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~-~~~~~~aD~~~~ 56 (720)
+..+++|.|.|..+..+++-++.+||+|+++++.++.. ...+.-+|+.+.
T Consensus 198 p~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~~~~fp~a~~v~~ 248 (362)
T 3on5_A 198 PKERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCEKHFFPDADEIIV 248 (362)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGCGGGCTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccccccCCCceEEec
Confidence 45689999999999999999999999999997654322 222334565543
No 419
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=61.52 E-value=22 Score=39.57 Aligned_cols=32 Identities=13% Similarity=0.067 Sum_probs=28.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
-||+.|.+.+..+..+++.++++|++++.+.+
T Consensus 335 GKrv~i~~~~~~~~~l~~~l~ElGm~vv~~~t 366 (533)
T 1mio_A 335 GKTACLYVGGSRSHTYMNMLKSFGVDSLVAGF 366 (533)
T ss_dssp TCEEEEEESSSHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHCCCEEEEEEe
Confidence 47999999999999999999999999998864
No 420
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=61.47 E-value=12 Score=37.35 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=28.1
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEee
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s 39 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3578999985 78999999999999999888754
No 421
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=61.47 E-value=7.8 Score=42.69 Aligned_cols=88 Identities=16% Similarity=0.191 Sum_probs=57.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc----cccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCE
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALH----VKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQA 83 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~----~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~da 83 (720)
-||+.|.+.+..+..+++.++++|.+++.+.+........ ..+.+..+.+ +..|...+.+.+++.++|.
T Consensus 332 GKrv~i~~~~~~~~~l~~~L~ElGmevv~~gt~~~~~~d~~~~~~~l~~~~~i~-------~d~d~~el~~~i~~~~pDL 404 (483)
T 3pdi_A 332 GKRVLLYTGGVKSWSVVSALQDLGMKVVATGTKKSTEEDKARIRELMGDDVKML-------DEGNARVLLKTVDEYQADI 404 (483)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHTCEEEEECBSSSCHHHHHHHHHHSCSSCCBC-------CSCSHHHHHHHHHHTTCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHCCCEEEEEecCCCCHHHHHHHHHhcCCCCEEE-------eCCCHHHHHHHHHhcCCCE
Confidence 4799999988889999999999999998875432111000 0011221111 2246788889999999998
Q ss_pred EEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 84 IHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 84 I~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
++.+.- + ....++.|+|++
T Consensus 405 ~ig~~~---~----~~~a~k~gIP~~ 423 (483)
T 3pdi_A 405 LIAGGR---N----MYTALKGRVPFL 423 (483)
T ss_dssp EECCGG---G----HHHHHHTTCCBC
T ss_pred EEECCc---h----hHHHHHcCCCEE
Confidence 884321 1 234567888875
No 422
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=61.45 E-value=12 Score=37.15 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=28.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 478999985 789999999999999998887543
No 423
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=61.43 E-value=5.9 Score=43.37 Aligned_cols=32 Identities=13% Similarity=0.120 Sum_probs=29.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
||+|+|+|+|..++..+..|.+.|++|.++..
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEcc
Confidence 78999999999999999999999999888843
No 424
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=61.28 E-value=10 Score=37.64 Aligned_cols=69 Identities=10% Similarity=0.117 Sum_probs=44.3
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc--CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 10 SILIANR-GEIACRIMRTAKKM--GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~~~--G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
+|||.|+ |.++..+++.+.+. |++++++..++.........--+.+. .+..|.+.+.++.+ ++|+|+-
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-------~D~~d~~~~~~~~~--~~d~vi~ 71 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQ-------ADYGDEAALTSALQ--GVEKLLL 71 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEE-------CCTTCHHHHHHHTT--TCSEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEE-------cCCCCHHHHHHHHh--CCCEEEE
Confidence 5899986 89999999999998 99999886543322100000012222 25567777776664 5788774
Q ss_pred C
Q psy15251 87 G 87 (720)
Q Consensus 87 g 87 (720)
.
T Consensus 72 ~ 72 (286)
T 2zcu_A 72 I 72 (286)
T ss_dssp C
T ss_pred e
Confidence 3
No 425
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=61.23 E-value=19 Score=35.25 Aligned_cols=40 Identities=15% Similarity=-0.036 Sum_probs=30.0
Q ss_pred CCCccCCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCC
Q psy15251 1 MTIASCVLDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDI 41 (720)
Q Consensus 1 m~~~~~~~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~ 41 (720)
|+++. ..|++||.| .|.++..+++.+.+.|+++++++.+.
T Consensus 1 M~~~l-~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 1 MTQRL-KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp --CTT-TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCC-CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 44432 347899998 47899999999999999988886443
No 426
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=61.19 E-value=12 Score=36.99 Aligned_cols=33 Identities=18% Similarity=0.078 Sum_probs=28.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.| .|.++..+++.+.+.|+++++++.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN 35 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899998 4789999999999999998887543
No 427
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=61.07 E-value=9.1 Score=38.68 Aligned_cols=30 Identities=13% Similarity=0.260 Sum_probs=27.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEE
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSV 37 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v 37 (720)
++||.|+|.|.++..+++.+.+.|++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~ 33 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAY 33 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 679999999999999999999999998776
No 428
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=61.03 E-value=12 Score=37.38 Aligned_cols=33 Identities=24% Similarity=0.231 Sum_probs=28.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 478999985 689999999999999998888543
No 429
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=60.93 E-value=9.3 Score=39.21 Aligned_cols=36 Identities=14% Similarity=0.133 Sum_probs=29.2
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEeeCC
Q psy15251 6 CVLDSILIAN-RGEIACRIMRTAKKMGIRVVSVYSDI 41 (720)
Q Consensus 6 ~~~~~iLI~~-~G~~a~~iira~~~~G~~~v~v~s~~ 41 (720)
.|.++|||.| .|-++..+++.+.+.|++|+++..+.
T Consensus 7 ~~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~ 43 (338)
T 2rh8_A 7 IGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDP 43 (338)
T ss_dssp --CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 3568999999 58999999999999999988765443
No 430
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=60.90 E-value=14 Score=37.14 Aligned_cols=33 Identities=9% Similarity=0.078 Sum_probs=28.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999985 789999999999999998888543
No 431
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=60.86 E-value=11 Score=37.80 Aligned_cols=78 Identities=9% Similarity=0.109 Sum_probs=45.8
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-cccccEEEEeCCCCCcccccCHHHHHHHHHHc-----
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALH-VKMADEAYRLEGKSSLDTYLNQAKILDIAVRS----- 79 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~----- 79 (720)
+.|++||.|+ +.++..+++.+.+.|+++++++.+.+..... ..+......+. -+..|.+.+.+++++.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~d~~~v~~~~~~~~~~~g 101 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVP-----TDVTDPDSVRALFTATVEKFG 101 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEE-----CCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEE-----ecCCCHHHHHHHHHHHHHHcC
Confidence 4578899885 6899999999999999988885432211000 00011111111 1445555555555443
Q ss_pred CCCEEEeCCC
Q psy15251 80 QCQAIHPGYG 89 (720)
Q Consensus 80 ~~daI~pg~g 89 (720)
++|.++-.-|
T Consensus 102 ~iD~lVnnAg 111 (272)
T 4dyv_A 102 RVDVLFNNAG 111 (272)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898876554
No 432
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=60.84 E-value=7.3 Score=37.81 Aligned_cols=85 Identities=4% Similarity=-0.054 Sum_probs=50.2
Q ss_pred CCEEEEEcCcHHHHHHHHH--HHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 8 LDSILIANRGEIACRIMRT--AKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira--~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
.++++|+|.|.++..+++. ... |++++++..+.. ........+.-+. . .+.+.+++++ ++|.++
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp-~k~g~~i~gv~V~--------~---~~dl~ell~~-~ID~Vi 145 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDP-EKVGRPVRGGVIE--------H---VDLLPQRVPG-RIEIAL 145 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCT-TTTTCEETTEEEE--------E---GGGHHHHSTT-TCCEEE
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCH-HHHhhhhcCCeee--------c---HHhHHHHHHc-CCCEEE
Confidence 4689999999999999985 334 888888865422 2221222222221 1 2335567777 899887
Q ss_pred eCCCCCcccHHHHHHHHHCCCe
Q psy15251 86 PGYGFLSENAEFANAVEGNRLI 107 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~~gl~ 107 (720)
...... ....++..|.++|+.
T Consensus 146 IA~Ps~-~~~ei~~~l~~aGi~ 166 (211)
T 2dt5_A 146 LTVPRE-AAQKAADLLVAAGIK 166 (211)
T ss_dssp ECSCHH-HHHHHHHHHHHHTCC
T ss_pred EeCCch-hHHHHHHHHHHcCCC
Confidence 544211 123455566666654
No 433
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=60.69 E-value=13 Score=38.06 Aligned_cols=84 Identities=7% Similarity=0.013 Sum_probs=48.8
Q ss_pred CEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 9 DSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
-||.|+|.|.++..+++.+++. ++++++++. .+.... .. .+ .. ..++.+ +.+. .++|+|+-.
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d-~~~~~~-----~~---~g-~~-~~~~~~---l~~~---~~~DvViia 72 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVR-RNPAEV-----PF---EL-QP-FRVVSD---IEQL---ESVDVALVC 72 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC-C---------------CC-TT-SCEESS---GGGS---SSCCEEEEC
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEc-CCHHHH-----HH---cC-CC-cCCHHH---HHhC---CCCCEEEEC
Confidence 4899999999999999999884 788887653 222211 11 11 01 122333 2222 578988855
Q ss_pred CCCCcccHHHHHHHHHCCCeEeC
Q psy15251 88 YGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 88 ~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
... ..+...+..+.+.|..++.
T Consensus 73 tp~-~~h~~~~~~al~aG~~Vi~ 94 (304)
T 3bio_A 73 SPS-REVERTALEILKKGICTAD 94 (304)
T ss_dssp SCH-HHHHHHHHHHHTTTCEEEE
T ss_pred CCc-hhhHHHHHHHHHcCCeEEE
Confidence 431 1234556667777887764
No 434
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=60.67 E-value=26 Score=33.80 Aligned_cols=35 Identities=17% Similarity=0.311 Sum_probs=29.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDID 42 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d 42 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+.+
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~ 38 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN 38 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcc
Confidence 368999984 78999999999999999988865543
No 435
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=60.65 E-value=29 Score=35.66 Aligned_cols=144 Identities=8% Similarity=-0.008 Sum_probs=82.8
Q ss_pred CEEEEEcCcHHHH-HHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 9 DSILIANRGEIAC-RIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 9 ~~iLI~~~G~~a~-~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
-||.|+|.|.++. ..++.++..|+++++|++.....+ ..++++. + ....|.+.+.+ +...++|+|+..
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~--~~~a~~~---~---~~~~~~~~~~l---l~~~~~D~V~i~ 73 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNR--AKFTSLF---P---SVPFAASAEQL---ITDASIDLIACA 73 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSC--HHHHHHS---T---TCCBCSCHHHH---HTCTTCCEEEEC
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHH--HHHHHhc---C---CCcccCCHHHH---hhCCCCCEEEEe
Confidence 3899999987775 677888778999888865322222 1122221 1 11245666654 445579998865
Q ss_pred CCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCCCC-C-HHHHHHHHH--HhCCcEEE
Q psy15251 88 YGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGEDQ-N-EEILMEQAE--RIGYPLMI 163 (720)
Q Consensus 88 ~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~~~-s-~~e~~~~~~--~ig~Pvvv 163 (720)
.-. ......+..+.++|..++.-.|-+... .+=..+.+++++.|+..--++..... . ...+.+..+ .+|-+..+
T Consensus 74 tp~-~~h~~~~~~al~aGkhVl~EKP~a~~~-~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~~~~i~~g~iG~i~~v 151 (336)
T 2p2s_A 74 VIP-CDRAELALRTLDAGKDFFTAKPPLTTL-EQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELVQRGEIGRVIQT 151 (336)
T ss_dssp SCG-GGHHHHHHHHHHTTCEEEECSSCCSCH-HHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHHHHHHHTTTTSSEEEE
T ss_pred CCh-hhHHHHHHHHHHCCCcEEEeCCCCCCH-HHHHHHHHHHHHcCCEEEEeeccccCcHHHHHHHHHHhCCCCCceEEE
Confidence 431 234667777888898766522211110 12234567778888876544331122 2 456666665 46767666
Q ss_pred ee
Q psy15251 164 KA 165 (720)
Q Consensus 164 Kp 165 (720)
..
T Consensus 152 ~~ 153 (336)
T 2p2s_A 152 MG 153 (336)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 436
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=60.57 E-value=59 Score=33.03 Aligned_cols=111 Identities=9% Similarity=-0.012 Sum_probs=61.0
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEE-EEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcC-CC
Q psy15251 6 CVLDSILIANR-GEIACRIMRTAKKMGIRVV-SVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQ-CQ 82 (720)
Q Consensus 6 ~~~~~iLI~~~-G~~a~~iira~~~~G~~~v-~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~-~d 82 (720)
++..+++|.|. |..+..+++.+.+.|++.+ .| ++.... ...... .-|.+++.+. .+.+ +|
T Consensus 11 ~~~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~V--nP~~~g--~~i~G~----------~vy~sl~el~---~~~~~~D 73 (297)
T 2yv2_A 11 DSETRVLVQGITGREGSFHAKAMLEYGTKVVAGV--TPGKGG--SEVHGV----------PVYDSVKEAL---AEHPEIN 73 (297)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE--CTTCTT--CEETTE----------EEESSHHHHH---HHCTTCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHhCCCcEEEEe--CCCCCC--ceECCE----------eeeCCHHHHh---hcCCCCC
Confidence 34557888896 7778899999999999843 33 333211 111111 1344554443 3444 78
Q ss_pred EEEeCCCCCcccHHHHHHHHHCCCe-Ee-CCCHHHHHHhcCHHHHHHHHHHCCCCCC
Q psy15251 83 AIHPGYGFLSENAEFANAVEGNRLI-FV-GPSSEAIRNMGIKSTSKEIMIKAEVPVI 137 (720)
Q Consensus 83 aI~pg~g~lsE~~~~a~~~~~~gl~-~~-Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p 137 (720)
.++-..-. .......+.|.+.|++ .+ ....-.- .+..+.++.+++.|+.+.
T Consensus 74 vaIi~vp~-~~~~~~v~ea~~~Gi~~vVi~t~G~~~---~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 74 TSIVFVPA-PFAPDAVYEAVDAGIRLVVVITEGIPV---HDTMRFVNYARQKGATII 126 (297)
T ss_dssp EEEECCCG-GGHHHHHHHHHHTTCSEEEECCCCCCH---HHHHHHHHHHHHHTCEEE
T ss_pred EEEEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCH---HHHHHHHHHHHHcCCEEE
Confidence 76633211 1235667777888887 32 2211000 124566778888888543
No 437
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=60.54 E-value=33 Score=35.25 Aligned_cols=36 Identities=28% Similarity=0.392 Sum_probs=32.3
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCC
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADA 45 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~ 45 (720)
||+++|.++.|...++++.+.|+++++|.+.+|.+.
T Consensus 5 rIvf~Gt~~fa~~~L~~L~~~~~~i~~Vvt~pd~p~ 40 (314)
T 1fmt_A 5 RIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPA 40 (314)
T ss_dssp EEEEEECSHHHHHHHHHHHHTTCEEEEEECCCCBC-
T ss_pred EEEEEecCHHHHHHHHHHHHCCCcEEEEEeCCCCcc
Confidence 899999999999999999999999999999877653
No 438
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=60.48 E-value=6.9 Score=40.57 Aligned_cols=36 Identities=22% Similarity=0.153 Sum_probs=28.4
Q ss_pred CccCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q psy15251 3 IASCVLDSILIANRGEIACRIMRTAKKMGIRVVSVY 38 (720)
Q Consensus 3 ~~~~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~ 38 (720)
|.++..+||.|+|.|.++..|+..+...|++|++++
T Consensus 1 Ma~p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D 36 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEE
Confidence 455667899999999999999999999999998874
No 439
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=60.43 E-value=16 Score=36.45 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=28.2
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEee
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s 39 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~ 63 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYV 63 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3578999985 68999999999999999888754
No 440
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=60.37 E-value=5.9 Score=40.13 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=30.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDI 41 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~ 41 (720)
-+++||+|+|..|.+.++.+.+.|.+++++..+.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4799999999999999999999999998886543
No 441
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=60.35 E-value=67 Score=27.28 Aligned_cols=61 Identities=11% Similarity=0.018 Sum_probs=34.7
Q ss_pred CCCccCCCCEEEEEcCcHHHHH-HHHHHHH-cCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHH
Q psy15251 1 MTIASCVLDSILIANRGEIACR-IMRTAKK-MGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVR 78 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~G~~a~~-iira~~~-~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~ 78 (720)
|.|.+.++.+|||+........ +.+.+++ .|++++... .+.+..++.+++
T Consensus 1 M~~~~~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~----------------------------~~~~~a~~~l~~ 52 (143)
T 3cnb_A 1 MSLNVKNDFSILIIEDDKEFADMLTQFLENLFPYAKIKIA----------------------------YNPFDAGDLLHT 52 (143)
T ss_dssp --------CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEE----------------------------CSHHHHHHHHHH
T ss_pred CcccccCCceEEEEECCHHHHHHHHHHHHhccCccEEEEE----------------------------CCHHHHHHHHHh
Confidence 6666666779999988776554 5556677 898843331 234455666777
Q ss_pred cCCCEEEeCCC
Q psy15251 79 SQCQAIHPGYG 89 (720)
Q Consensus 79 ~~~daI~pg~g 89 (720)
..+|.|+-.+.
T Consensus 53 ~~~dlii~d~~ 63 (143)
T 3cnb_A 53 VKPDVVMLDLM 63 (143)
T ss_dssp TCCSEEEEETT
T ss_pred cCCCEEEEecc
Confidence 77888875543
No 442
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=60.34 E-value=6.9 Score=42.83 Aligned_cols=94 Identities=11% Similarity=0.005 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-cccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALH-VKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
+..++++|+|+|.++..+++.+.+ ++.+.++..+.+..... ..+-+..+..+ +..|.+ ++.-+.-..+|++
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~d~~r~~~la~~l~~~~Vi~G------D~td~~-~L~ee~i~~~D~~ 304 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIERNLQRAEKLSEELENTIVFCG------DAADQE-LLTEENIDQVDVF 304 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHCTTSEEEES------CTTCHH-HHHHTTGGGCSEE
T ss_pred ccccEEEEEcchHHHHHHHHHhhh-cCceEEEecCHHHHHHHHHHCCCceEEec------cccchh-hHhhcCchhhcEE
Confidence 467899999999999999999965 68888885443322111 11222233322 344543 3344444557888
Q ss_pred EeCCCCCcccHHHHHHHHHCCCe
Q psy15251 85 HPGYGFLSENAEFANAVEGNRLI 107 (720)
Q Consensus 85 ~pg~g~lsE~~~~a~~~~~~gl~ 107 (720)
+...+.--.|.-.+-.+.+.|.+
T Consensus 305 ia~T~~De~Ni~~~llAk~~gv~ 327 (461)
T 4g65_A 305 IALTNEDETNIMSAMLAKRMGAK 327 (461)
T ss_dssp EECCSCHHHHHHHHHHHHHTTCS
T ss_pred EEcccCcHHHHHHHHHHHHcCCc
Confidence 76655322244444555555543
No 443
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=60.33 E-value=10 Score=36.44 Aligned_cols=61 Identities=5% Similarity=-0.003 Sum_probs=44.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc-CCCEEE
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS-QCQAIH 85 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~-~~daI~ 85 (720)
.|++||.|+ +.++..+++.+.+.|+++++++.+.+ + +..|.+.+.+++++. ++|.++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------~-------------D~~~~~~v~~~~~~~g~id~lv 64 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------L-------------DISDEKSVYHYFETIGAFDHLI 64 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------C-------------CTTCHHHHHHHHHHHCSEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------c-------------CCCCHHHHHHHHHHhCCCCEEE
Confidence 478999985 78999999999999999888743322 1 345666777777665 578777
Q ss_pred eCCC
Q psy15251 86 PGYG 89 (720)
Q Consensus 86 pg~g 89 (720)
-.-|
T Consensus 65 ~nAg 68 (223)
T 3uce_A 65 VTAG 68 (223)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 5444
No 444
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=60.29 E-value=3.7 Score=42.72 Aligned_cols=90 Identities=12% Similarity=0.045 Sum_probs=53.9
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcC---CcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 9 DSILIANRGEIACRIMRTAKKMG---IRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G---~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
-|+.|+|.|.++...++.+++.+ ++++++++.....+ ..++++ +-++ ..|.+.+.+ +...++|+|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a--~~~a~~-~~~~-----~~~~~~~~l---l~~~~vD~V~ 71 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRA--KEFAQK-HDIP-----KAYGSYEEL---AKDPNVEVAY 71 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHH--HHHHHH-HTCS-----CEESSHHHH---HHCTTCCEEE
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHH--HHHHHH-cCCC-----cccCCHHHH---hcCCCCCEEE
Confidence 49999999999999999998774 56777754221111 112221 1010 134565544 4456789887
Q ss_pred eCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 86 PGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 86 pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
...- -......+..+.++|..++.
T Consensus 72 i~tp-~~~H~~~~~~al~~GkhVl~ 95 (334)
T 3ohs_X 72 VGTQ-HPQHKAAVMLCLAAGKAVLC 95 (334)
T ss_dssp ECCC-GGGHHHHHHHHHHTTCEEEE
T ss_pred ECCC-cHHHHHHHHHHHhcCCEEEE
Confidence 6542 12345667777778877654
No 445
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=60.28 E-value=4.6 Score=41.38 Aligned_cols=31 Identities=13% Similarity=0.075 Sum_probs=28.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVY 38 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~ 38 (720)
..+|+|+|+|..++.++..|++.|++++++.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie 38 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFE 38 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEe
Confidence 3589999999999999999999999988884
No 446
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=60.20 E-value=27 Score=35.48 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=29.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
-++|.|+|-|.++..+++.++.+|+++++.+..
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~ 154 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAFGMRVIAYTRS 154 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred cchheeeccCchhHHHHHHHHhhCcEEEEEecc
Confidence 479999999999999999999999998777443
No 447
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=60.16 E-value=21 Score=36.46 Aligned_cols=31 Identities=16% Similarity=0.133 Sum_probs=27.3
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc-CCcEEEEeeC
Q psy15251 10 SILIANR-GEIACRIMRTAKKM-GIRVVSVYSD 40 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~~~-G~~~v~v~s~ 40 (720)
+|||.|+ |.++..+++.+.+. |++++++...
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 34 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIG 34 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 7999986 89999999999998 8999888644
No 448
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=60.00 E-value=11 Score=37.48 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=27.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVY 38 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~ 38 (720)
.|++||.|+ +.++..+++.+.+.|+++++++
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~ 42 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHY 42 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 478999985 6899999999999999988875
No 449
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=59.85 E-value=2.6e+02 Score=32.58 Aligned_cols=46 Identities=15% Similarity=0.255 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCcEEEEEecC
Q psy15251 251 PGISSEFRSRLGSTGVQVARAVRYHNAGTVEFIMDPSSGEFYFMEMNT 298 (720)
Q Consensus 251 ~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiNp 298 (720)
+.++++...+|.+.+.++=+..| .+-.+||-++..+|++|++-.-|
T Consensus 290 ~~L~d~~~~~L~~~~~~lE~~yg--~pqDIEwai~~~~g~L~iLQaRP 335 (794)
T 2ols_A 290 FSITDEEITELAHYALTIEKHYG--RPMDIEWGRDGLDGKLYILQARP 335 (794)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHT--SCEEEEEEECTTTCCEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHcC--CCeEEEEEEECCCCeEEEEEecC
Confidence 35788899999999999888876 48999999992256899987644
No 450
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=59.76 E-value=13 Score=37.30 Aligned_cols=34 Identities=18% Similarity=0.136 Sum_probs=28.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3478999985 689999999999999998888543
No 451
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=59.74 E-value=10 Score=37.68 Aligned_cols=59 Identities=19% Similarity=0.213 Sum_probs=40.3
Q ss_pred eeecCCcceeeEEecCCCCeeeCCCeEEEEEeeeeEEEEEcCCCeEEEEEEcCCCCcccCCCeEEEEe
Q psy15251 651 KVVSPMPGMVDKVLVQPGQAVKTGDPIMVIIAMKMEYVITSGTSGIIEEIFYAAGQSIQKNQNLVKIV 718 (720)
Q Consensus 651 ~v~ap~~g~v~~~~v~~G~~V~~g~~l~~~eamkm~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 718 (720)
.|.|+..|+|+.+--..| -| -+++|+--.--..+.+. +.++.|++||.|.+|++|..+.
T Consensus 95 pV~A~~~G~V~~~g~~~~----~G-~~ViI~Hg~G~~t~Y~H----L~~i~Vk~Gd~V~~Gq~IG~vG 153 (245)
T 3tuf_B 95 DVSASLSGTVVKAEKDPV----LG-YVVEVEHADGLSTVYQS----LSEVSVEQGDKVKQNQVIGKSG 153 (245)
T ss_dssp EEECSSCEEEEEEEEETT----TE-EEEEEECSTTEEEEEEE----ESEESCCTTCEECTTCEEEECB
T ss_pred eEEeCcCeEEEEEEecCC----Cc-eEEEEEeCCCEEEEEec----CCccccCCCCEECCCCEEEEeC
Confidence 699999999987754332 12 34555544434445444 3357899999999999998764
No 452
>2vob_A Trypanothione synthetase; ligase; 2.3A {Leishmania major} PDB: 2vps_A 2vpm_A
Probab=59.60 E-value=9.1 Score=43.67 Aligned_cols=98 Identities=12% Similarity=0.210 Sum_probs=47.8
Q ss_pred HHHHHHHHC--CCeEeCCCHHHHHHhcCHHHHHHHHHHC--CCCCCCcccCCCCCHHHHHHHHHHhCCcEEEeecCCCCC
Q psy15251 96 EFANAVEGN--RLIFVGPSSEAIRNMGIKSTSKEIMIKA--EVPVIPGYHGEDQNEEILMEQAERIGYPLMIKAVRGGGG 171 (720)
Q Consensus 96 ~~a~~~~~~--gl~~~Gp~~~~i~~~~DK~~~r~~l~~~--Gvp~p~~~~~~~~s~~e~~~~~~~ig~PvvvKp~~g~Gg 171 (720)
.+..++.+. .+.++.|....+ +.||..+.-+-+.. .-..+|++. ..+. .+ .+- .+|+||..|.+|
T Consensus 487 ~~~~~l~~~~~~v~~ieP~wk~L--lsNKaiLalLW~l~p~hp~LLpt~f--~~~~-~~----~~~--~yV~KPi~gReG 555 (652)
T 2vob_A 487 RLCDLLLGDDWEILYFEPMWKVI--PSNKAILPMIYHNHPEHPAILKAEY--ELTD-EL----RKH--GYAKKPIVGRVG 555 (652)
T ss_dssp CHHHHHSSSCTTSEEESCGGGGT--TTSTTHHHHHHHHCTTCTTBCCEES--SCCH-HH----HHH--CEEEEECC----
T ss_pred HHHHHHhcCCCceEEeChhHHHh--hcCHHHHHHHHhcccCCCCCCchhh--cCCC-cc----ccC--CeEeccCCCCCC
Confidence 467778888 888997776654 68999888777742 223445543 2222 11 111 599999999999
Q ss_pred cceEEeCCHHHHHHHHHHHHHHHHhcCCCCcEEEeccccC
Q psy15251 172 KGMRIVRDSANFLAQLRSAQRESQSAFNDSKVLLEKYIQS 211 (720)
Q Consensus 172 ~Gv~~v~~~~el~~~~~~~~~~~~~~f~~~~~lvEeyI~g 211 (720)
.||.+.....+.. + .....+++.++++|+|++=
T Consensus 556 ~nV~I~~~~~~~~---~----~~~g~y~~~~~IyQe~~~l 588 (652)
T 2vob_A 556 SNVIITSGDGVVH---A----ESGGKYGKRNMIYQQLFEL 588 (652)
T ss_dssp ------------------------------CEEEEECCC-
T ss_pred CCEEEEcCCchhh---h----hcccccCCCCeEEEecccC
Confidence 9999986533221 1 1223355789999999974
No 453
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=59.52 E-value=9.6 Score=40.02 Aligned_cols=29 Identities=21% Similarity=0.172 Sum_probs=27.3
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q psy15251 10 SILIANRGEIACRIMRTAKKMGIRVVSVY 38 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~G~~~v~v~ 38 (720)
||+|+|+|..++-++..|++.|++++++.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEe
Confidence 89999999999999999999999988884
No 454
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=59.50 E-value=17 Score=39.24 Aligned_cols=32 Identities=16% Similarity=0.082 Sum_probs=28.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCC--cEEEEee
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGI--RVVSVYS 39 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~--~~v~v~s 39 (720)
+++|+|+|+|..++..+..|++.|+ +|+++..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa 35 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVES 35 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECS
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 4699999999999999999999999 8877743
No 455
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=59.26 E-value=18 Score=35.66 Aligned_cols=36 Identities=11% Similarity=0.236 Sum_probs=30.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcC---CcEEEEeeCCC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMG---IRVVSVYSDID 42 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G---~~~v~v~s~~d 42 (720)
++|++||.|+ |.++..+++.+.+.| ++++++..+.+
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~ 59 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNRE 59 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTT
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChh
Confidence 4679999984 789999999999999 99888865543
No 456
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=59.23 E-value=8.6 Score=41.29 Aligned_cols=33 Identities=3% Similarity=0.122 Sum_probs=28.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHH--cCCcEEEEee
Q psy15251 7 VLDSILIANRGEIACRIMRTAKK--MGIRVVSVYS 39 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~--~G~~~v~v~s 39 (720)
|+++|+|+|+|..++..+..+++ .|++++++..
T Consensus 1 M~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~ 35 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CCCCEEEECccHHHHHHHHHHHcCCCCCeEEEECC
Confidence 35799999999999999999999 7899988843
No 457
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=59.22 E-value=9.1 Score=37.40 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=28.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 478999985 789999999999999998888543
No 458
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=59.18 E-value=8.1 Score=40.65 Aligned_cols=73 Identities=16% Similarity=0.099 Sum_probs=47.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCccc-c-cccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHV-K-MADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~-~-~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.-++|||.|.|.++..+++.++.+|.+++++...++...... . -+|..+. +.+.+.+.++. .++|.+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~---------~~~~~~~~~~~--~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLV---------SRDQEQMQAAA--GTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEE---------TTCHHHHHHTT--TCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEe---------ccCHHHHHHhh--CCCCEE
Confidence 457999999999999999999999999887764443221111 1 1455442 23444444433 378988
Q ss_pred EeCCCC
Q psy15251 85 HPGYGF 90 (720)
Q Consensus 85 ~pg~g~ 90 (720)
+-..|.
T Consensus 256 id~~g~ 261 (366)
T 1yqd_A 256 IDTVSA 261 (366)
T ss_dssp EECCSS
T ss_pred EECCCc
Confidence 876653
No 459
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=59.17 E-value=27 Score=33.91 Aligned_cols=72 Identities=11% Similarity=0.109 Sum_probs=45.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHH-cCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHc---CC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKK-MGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRS---QC 81 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~-~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~---~~ 81 (720)
.+|++||.|+ +.++..+++.+.+ .|..++++..+........ ..+.+ +..+.+.+.++++.. ++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~----~~~~~-------Dv~~~~~v~~~~~~~~~~~i 71 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL----KFIKA-------DLTKQQDITNVLDIIKNVSF 71 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE----EEEEC-------CTTCHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc----eEEec-------CcCCHHHHHHHHHHHHhCCC
Confidence 4689999985 6899999999988 7888777754433111111 22322 445566666555433 67
Q ss_pred CEEEeCCC
Q psy15251 82 QAIHPGYG 89 (720)
Q Consensus 82 daI~pg~g 89 (720)
|.++-.-|
T Consensus 72 d~lv~nAg 79 (244)
T 4e4y_A 72 DGIFLNAG 79 (244)
T ss_dssp EEEEECCC
T ss_pred CEEEECCc
Confidence 87775444
No 460
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=59.14 E-value=9.3 Score=39.73 Aligned_cols=74 Identities=8% Similarity=0.088 Sum_probs=45.9
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHc-CC-cEEEEeeCCCCCC-ccccc--ccEEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKM-GI-RVVSVYSDIDADA-LHVKM--ADEAYRLEGKSSLDTYLNQAKILDIAVRSQC 81 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~-G~-~~v~v~s~~d~~~-~~~~~--aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 81 (720)
.++|||.|+ |.++..+++.+.+. |+ +++++..+..... ....+ ..-.+.. .+..|.+.+.++.+ ++
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~------~Dl~d~~~l~~~~~--~~ 92 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFI------GDVRDLERLNYALE--GV 92 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEE------CCTTCHHHHHHHTT--TC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEE------CCCCCHHHHHHHHh--cC
Confidence 479999995 89999999999999 98 7777644321100 00000 1111221 25567777777664 68
Q ss_pred CEEEeCCC
Q psy15251 82 QAIHPGYG 89 (720)
Q Consensus 82 daI~pg~g 89 (720)
|+|+-..+
T Consensus 93 D~Vih~Aa 100 (344)
T 2gn4_A 93 DICIHAAA 100 (344)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 98886554
No 461
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=59.08 E-value=7.4 Score=40.80 Aligned_cols=72 Identities=19% Similarity=0.084 Sum_probs=47.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCccc-cc-ccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHV-KM-ADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~-~~-aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.-++|||.|.|.++.-+++.++.+|.+++++...++...... ++ +|+.+. +.+.+.+.++. .++|.+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~---------~~~~~~~~~~~--~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVI---------GSDQAKMSELA--DSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEE---------TTCHHHHHHST--TTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeec---------cccHHHHHHhc--CCCCEE
Confidence 457999999999999999999999999888765544321111 11 455442 23444444332 368888
Q ss_pred EeCCC
Q psy15251 85 HPGYG 89 (720)
Q Consensus 85 ~pg~g 89 (720)
+-..|
T Consensus 249 id~~g 253 (357)
T 2cf5_A 249 IDTVP 253 (357)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86665
No 462
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=59.05 E-value=8 Score=39.62 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=30.6
Q ss_pred CCCccC-CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEE
Q psy15251 1 MTIASC-VLDSILIANRGEIACRIMRTAKKMGIRVVSV 37 (720)
Q Consensus 1 m~~~~~-~~~~iLI~~~G~~a~~iira~~~~G~~~v~v 37 (720)
|.|... +++||.|+|-|.++..+++.+.+.|+++++.
T Consensus 1 m~m~~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~ 38 (306)
T 3l6d_A 1 MSLSDESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIW 38 (306)
T ss_dssp -CCCCCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCcccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 666543 4678999999999999999999999987665
No 463
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=59.03 E-value=7.2 Score=41.33 Aligned_cols=32 Identities=16% Similarity=0.337 Sum_probs=28.4
Q ss_pred EEEEcCCCeEEEEEEcCCCCcccCCCeEEEEec
Q psy15251 687 YVITSGTSGIIEEIFYAAGQSIQKNQNLVKIVP 719 (720)
Q Consensus 687 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 719 (720)
.-|+||.+|.+. ..++.||.|++||+|++|.+
T Consensus 291 ~~v~A~~~Gl~~-~~v~lGd~V~kG~~la~I~d 322 (368)
T 3fmc_A 291 RKFHAPKAGMVE-YLGKVGVPMKATDPLVNLLR 322 (368)
T ss_dssp EEEECSSCEEEE-ECSCTTCCBCTTCEEEEEEC
T ss_pred EEEecCCCEEEE-EeCCCCCEeCCCCEEEEEEc
Confidence 458999999887 67899999999999999864
No 464
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=59.02 E-value=13 Score=37.20 Aligned_cols=34 Identities=12% Similarity=0.063 Sum_probs=28.5
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
+.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999984 789999999999999998888543
No 465
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=59.00 E-value=92 Score=33.61 Aligned_cols=113 Identities=14% Similarity=0.164 Sum_probs=69.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHH-----------
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIA----------- 76 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a----------- 76 (720)
-+++.|-|-|..+..+++.+.++|.++|++... +..+. .+ +=+|.+.+..+.
T Consensus 235 Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~-----------~G~i~-d~-----~Gid~e~l~~l~e~k~~~~g~v~ 297 (450)
T 4fcc_A 235 GMRVSVSGSGNVAQYAIEKAMEFGARVITASDS-----------SGTVV-DE-----SGFTKEKLARLIEIKSSRDGRVA 297 (450)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEEET-----------TEEEE-CT-----TCCCHHHHHHHHHHHTSTTCCHH
T ss_pred CCEEEEeCCChHHHHHHHHHHhcCCeEEEEecC-----------CceEE-eC-----CCCCHHHHHHHHHHhcccCCccc
Confidence 579999999999999999999999999888421 11111 11 113333333221
Q ss_pred ---H-------------HcCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcc
Q psy15251 77 ---V-------------RSQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGY 140 (720)
Q Consensus 77 ---~-------------~~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~ 140 (720)
+ ..++|..+|+-.--.=+..-+..+.+.++.++...+.. ---....++|++.||-..|.+
T Consensus 298 ~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~IaEgAN~----p~t~eA~~iL~~rGIl~~PD~ 373 (450)
T 4fcc_A 298 DYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANM----PTTIEATELFQQAGVLFAPGK 373 (450)
T ss_dssp HHHHHHTCEEEETCCGGGSCCSEEEECSCTTCBCHHHHHHHHHTTCCEEECCSSS----CBCHHHHHHHHHTTCEEECHH
T ss_pred cccccCCcEEecCcccccCCccEEeeccccccccHHHHHHHHhcCceEEecCCCC----CCCHHHHHHHHHCCCEEEChH
Confidence 1 23589999986321124566777777776655421110 001123467889999999976
Q ss_pred c
Q psy15251 141 H 141 (720)
Q Consensus 141 ~ 141 (720)
.
T Consensus 374 ~ 374 (450)
T 4fcc_A 374 A 374 (450)
T ss_dssp H
T ss_pred H
Confidence 5
No 466
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=58.98 E-value=7.1 Score=42.10 Aligned_cols=32 Identities=16% Similarity=0.136 Sum_probs=28.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHH---cCCcEEEEee
Q psy15251 8 LDSILIANRGEIACRIMRTAKK---MGIRVVSVYS 39 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~---~G~~~v~v~s 39 (720)
|++|+|+|+|..++.++..+++ .|++++++..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~ 38 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISA 38 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeC
Confidence 6899999999999999999999 8999988843
No 467
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=58.95 E-value=8.2 Score=41.07 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=28.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHH---cCCcEEEEeeC
Q psy15251 8 LDSILIANRGEIACRIMRTAKK---MGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~---~G~~~v~v~s~ 40 (720)
|++|+|+|+|..++.++..+++ .|++++++...
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~ 36 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKS 36 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCC
Confidence 4689999999999999999999 89999888543
No 468
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=58.94 E-value=18 Score=40.10 Aligned_cols=86 Identities=16% Similarity=0.016 Sum_probs=53.2
Q ss_pred CCEEEEEcCcHHHHHHHHHH-HHcCCcEEEEeeCCCCCCcc-----cccccEEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy15251 8 LDSILIANRGEIACRIMRTA-KKMGIRVVSVYSDIDADALH-----VKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQC 81 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~-~~~G~~~v~v~s~~d~~~~~-----~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 81 (720)
-||+.|.+.+..+..+++.+ +++|++++.+.+........ ..+.++.+.. .|...+.+.+++.++
T Consensus 280 GKrv~i~gd~~~~~~la~~L~~ElGm~vv~~gt~~~~~~~~~~~~~~~~~~~v~i~---------~D~~el~~~i~~~~p 350 (525)
T 3aek_B 280 GKRVFIFGDGTHVIAAARIAAKEVGFEVVGMGCYNREMARPLRTAAAEYGLEALIT---------DDYLEVEKAIEAAAP 350 (525)
T ss_dssp TCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEESCGGGHHHHHHHHHHTTCCCEEC---------SCHHHHHHHHHHHCC
T ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCeeEEEecCchhHHHHHHHHHHhcCCcEEEe---------CCHHHHHHHHhhcCC
Confidence 57999999889999999999 89999998775532111100 1112222221 255677778888888
Q ss_pred CEEEeCCCCCcccHHHHHHHHHCCCeEe
Q psy15251 82 QAIHPGYGFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 82 daI~pg~g~lsE~~~~a~~~~~~gl~~~ 109 (720)
|.++.+ ..-...+.+.|+|++
T Consensus 351 DL~ig~-------~~~~~~a~~~giP~~ 371 (525)
T 3aek_B 351 ELILGT-------QMERNIAKKLGLPCA 371 (525)
T ss_dssp SEEEEC-------HHHHHHHHHHTCCEE
T ss_pred CEEEec-------chhHHHHHHcCCCEE
Confidence 877632 222334455666653
No 469
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=58.87 E-value=22 Score=37.83 Aligned_cols=77 Identities=10% Similarity=-0.026 Sum_probs=47.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcC-CcEEEEeeCCCCCCcccc-c-------ccEEEEeCCCCCcccccCHHHHHHHHH
Q psy15251 8 LDSILIAN-RGEIACRIMRTAKKMG-IRVVSVYSDIDADALHVK-M-------ADEAYRLEGKSSLDTYLNQAKILDIAV 77 (720)
Q Consensus 8 ~~~iLI~~-~G~~a~~iira~~~~G-~~~v~v~s~~d~~~~~~~-~-------aD~~~~i~~~~~~~~~~~~~~i~~~a~ 77 (720)
.++|||.| .|.++..+++.+.+.| ++++++............ + ......+. .+..|.+.+..+..
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~-----~Dl~d~~~~~~~~~ 109 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFA-----LDIGSIEYDAFIKA 109 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEEC-----CCTTSHHHHHHHHH
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEE-----EeCCCHHHHHHHHH
Confidence 47899999 5899999999999999 677777432111000000 0 01222222 25567666666666
Q ss_pred HcCCCEEEeCCC
Q psy15251 78 RSQCQAIHPGYG 89 (720)
Q Consensus 78 ~~~~daI~pg~g 89 (720)
..++|.|+-..+
T Consensus 110 ~~~~D~Vih~Aa 121 (399)
T 3nzo_A 110 DGQYDYVLNLSA 121 (399)
T ss_dssp CCCCSEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 688998885443
No 470
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=58.78 E-value=34 Score=35.03 Aligned_cols=34 Identities=18% Similarity=0.124 Sum_probs=29.7
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcC-CcEEEEeeC
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMG-IRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G-~~~v~v~s~ 40 (720)
|+.||.|+|.|.++..+++.+.+.| +++++.+.+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5579999999999999999999999 988777544
No 471
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=58.61 E-value=15 Score=38.72 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=24.7
Q ss_pred CCCEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEee
Q psy15251 7 VLDSILIANRGEI-----ACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 7 ~~~~iLI~~~G~~-----a~~iira~~~~G~~~v~v~s 39 (720)
.|.|||++..+.. .+.+++++++.|++|.++.+
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~ 56 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTA 56 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeC
Confidence 3457888764432 67899999999999888763
No 472
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=58.59 E-value=32 Score=33.21 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=27.1
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVY 38 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~ 38 (720)
.|++||.|+ |.++..+++.+.+.|+++++++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 468999985 7899999999999999988874
No 473
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=58.40 E-value=16 Score=37.95 Aligned_cols=78 Identities=15% Similarity=0.076 Sum_probs=49.7
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcc-cccccEEEEeCCCCCcccccCHHHHHHHHH---HcCCC
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALH-VKMADEAYRLEGKSSLDTYLNQAKILDIAV---RSQCQ 82 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~-~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~---~~~~d 82 (720)
.-++|||.|.|.++..+++.++.+|.+++++..+++..... .--+|..+... +.....+.+.+... ..++|
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~-----~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVD-----PAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECC-----TTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCc-----ccccHHHHHHHHhccccCCCCC
Confidence 45799999999999999999999999977765433221111 11246554321 00223556666554 35799
Q ss_pred EEEeCCC
Q psy15251 83 AIHPGYG 89 (720)
Q Consensus 83 aI~pg~g 89 (720)
.++-..|
T Consensus 243 ~vid~~g 249 (352)
T 1e3j_A 243 VTIDCSG 249 (352)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9986665
No 474
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=58.33 E-value=7.8 Score=40.15 Aligned_cols=34 Identities=24% Similarity=0.165 Sum_probs=27.5
Q ss_pred ccCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEE
Q psy15251 4 ASCVLDSILIANRGEIACRIMRTAKKMGIRVVSV 37 (720)
Q Consensus 4 ~~~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v 37 (720)
++..++||.|+|.|.++..++..+.+.|++|++.
T Consensus 2 ~~~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~ 35 (319)
T 2dpo_A 2 ASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLY 35 (319)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCceEEEEeeCHHHHHHHHHHHHCCCEEEEE
Confidence 4445789999999999999999999999998776
No 475
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=58.11 E-value=8.6 Score=39.60 Aligned_cols=87 Identities=13% Similarity=0.144 Sum_probs=51.6
Q ss_pred EEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeCC
Q psy15251 10 SILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPGY 88 (720)
Q Consensus 10 ~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg~ 88 (720)
||.|+|.|.++...++.+++. +++++++++. +... ...+++.. + ....|.+.+.+ + ..++|+|+...
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~-~~~~-~~~~~~~~---~---~~~~~~~~~~~---l-~~~~D~V~i~t 70 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR-KLET-AATFASRY---Q---NIQLFDQLEVF---F-KSSFDLVYIAS 70 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECS-SHHH-HHHHGGGS---S---SCEEESCHHHH---H-TSSCSEEEECS
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC-CHHH-HHHHHHHc---C---CCeEeCCHHHH---h-CCCCCEEEEeC
Confidence 899999999999999999887 6777777532 2111 11122210 0 01134565544 3 56789888654
Q ss_pred CCCcccHHHHHHHHHCCCeEe
Q psy15251 89 GFLSENAEFANAVEGNRLIFV 109 (720)
Q Consensus 89 g~lsE~~~~a~~~~~~gl~~~ 109 (720)
-. ......+..+.+.|..++
T Consensus 71 p~-~~h~~~~~~al~~gk~V~ 90 (325)
T 2ho3_A 71 PN-SLHFAQAKAALSAGKHVI 90 (325)
T ss_dssp CG-GGHHHHHHHHHHTTCEEE
T ss_pred Ch-HHHHHHHHHHHHcCCcEE
Confidence 31 123456666667777654
No 476
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=58.10 E-value=7.6 Score=40.81 Aligned_cols=77 Identities=16% Similarity=0.081 Sum_probs=50.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccc-cccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVK-MADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~-~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
.-++|||.|.|.++..+++.|+.+|.+++++..++.......+ -+|..+. . ......+.+.++....++|.++
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~-~-----~~~~~~~~v~~~~~g~g~D~vi 262 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGIN-R-----LEEDWVERVYALTGDRGADHIL 262 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEE-T-----TTSCHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEc-C-----CcccHHHHHHHHhCCCCceEEE
Confidence 4579999999999999999999999998888644322211111 2455543 1 0111234566666556899888
Q ss_pred eCCC
Q psy15251 86 PGYG 89 (720)
Q Consensus 86 pg~g 89 (720)
-..|
T Consensus 263 d~~g 266 (363)
T 3uog_A 263 EIAG 266 (363)
T ss_dssp EETT
T ss_pred ECCC
Confidence 6665
No 477
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=58.08 E-value=57 Score=32.28 Aligned_cols=35 Identities=17% Similarity=0.122 Sum_probs=29.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCCC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSDID 42 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~d 42 (720)
.|++||.|+ +.++..+++.+.+.|+++++++.+.+
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 41 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAV 41 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCS
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccch
Confidence 478999985 68999999999999999888865543
No 478
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=58.08 E-value=5.8 Score=41.63 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=47.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccc-cccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVK-MADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAI 84 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~-~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI 84 (720)
.-++|||.|.|.++.-+++.++.+ |.+++++..+++......+ =+|+.+... +. ..+.+.++....++|.+
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~-----~~--~~~~v~~~~~g~g~Dvv 258 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR-----RD--PVKQVMELTRGRGVNVA 258 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT-----SC--HHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEecc-----ch--HHHHHHHHhCCCCCcEE
Confidence 457999999999999999999999 9998887644332111111 156655311 11 22344444333478988
Q ss_pred EeCCC
Q psy15251 85 HPGYG 89 (720)
Q Consensus 85 ~pg~g 89 (720)
+=..|
T Consensus 259 id~~G 263 (359)
T 1h2b_A 259 MDFVG 263 (359)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 86655
No 479
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=57.86 E-value=8.8 Score=36.41 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=25.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
||++++|+|.|..+..++..++..+|+++++..
T Consensus 2 ~m~~~~I~Gagg~gk~v~~~~~~~~~~v~~f~D 34 (194)
T 3bfp_A 2 RTEKIYIYGASGHGLVCEDVAKNMGYKECIFLD 34 (194)
T ss_dssp CCSEEEEEC--CHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCccEEEEeCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 357899999999999999999888899877643
No 480
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=57.60 E-value=8.8 Score=37.36 Aligned_cols=77 Identities=16% Similarity=0.240 Sum_probs=48.1
Q ss_pred CCCEEEEE--cCcHHHHHHHHHHHH-cCCcEEEEeeCCCCCCcccccccE----EEEeCCCCCcccccC----HHHHHHH
Q psy15251 7 VLDSILIA--NRGEIACRIMRTAKK-MGIRVVSVYSDIDADALHVKMADE----AYRLEGKSSLDTYLN----QAKILDI 75 (720)
Q Consensus 7 ~~~~iLI~--~~G~~a~~iira~~~-~G~~~v~v~s~~d~~~~~~~~aD~----~~~i~~~~~~~~~~~----~~~i~~~ 75 (720)
+++||.|+ |+|.....++++++. +++++++|.++++.. ....|.+ .+.++ ..+|.+ -+.+++.
T Consensus 11 ~~~ri~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~a~--~~~~A~~~gIp~~~~~----~~~~~~r~~~d~~~~~~ 84 (215)
T 3da8_A 11 APARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECR--AAEIAAEASVPVFTVR----LADHPSRDAWDVAITAA 84 (215)
T ss_dssp SSEEEEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSCCH--HHHHHHHTTCCEEECC----GGGSSSHHHHHHHHHHH
T ss_pred CCcEEEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCchH--HHHHHHHcCCCEEEeC----cccccchhhhhHHHHHH
Confidence 45678777 889999999998854 456899999988732 2222221 22221 111222 2467888
Q ss_pred HHHcCCCEEE-eCCC
Q psy15251 76 AVRSQCQAIH-PGYG 89 (720)
Q Consensus 76 a~~~~~daI~-pg~g 89 (720)
.++.++|.|+ .+|+
T Consensus 85 l~~~~~Dlivlagy~ 99 (215)
T 3da8_A 85 TAAHEPDLVVSAGFM 99 (215)
T ss_dssp HHTTCCSEEEEEECC
T ss_pred HHhhCCCEEEEcCch
Confidence 8889999655 4565
No 481
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=57.59 E-value=2.8 Score=43.71 Aligned_cols=92 Identities=10% Similarity=0.026 Sum_probs=55.6
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCC-CCCc-ccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 9 DSILIANRGEIACRIMRTAKKMGIRVVSVYSDID-ADAL-HVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 9 ~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d-~~~~-~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
-||.|+|.|.++...++++ ..+++++++++... .... ....+.+ +-+ ....|.|.+.+++ ..++|+|+.
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~ll~---~~~vD~V~I 73 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISE-MNI----KPKKYNNWWEMLE---KEKPDILVI 73 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHT-TTC----CCEECSSHHHHHH---HHCCSEEEE
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHH-cCC----CCcccCCHHHHhc---CCCCCEEEE
Confidence 4999999988887888888 77899998874322 1221 1111111 000 0124567666544 567999886
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
..- -......+..+.++|..++.
T Consensus 74 ~tp-~~~H~~~~~~al~aGkhVl~ 96 (337)
T 3ip3_A 74 NTV-FSLNGKILLEALERKIHAFV 96 (337)
T ss_dssp CSS-HHHHHHHHHHHHHTTCEEEE
T ss_pred eCC-cchHHHHHHHHHHCCCcEEE
Confidence 542 12245667778888988765
No 482
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=57.58 E-value=12 Score=36.61 Aligned_cols=33 Identities=21% Similarity=0.128 Sum_probs=28.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ |.++..+++.+.+.|++++++..+
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence 478999985 789999999999999998888543
No 483
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=57.51 E-value=18 Score=37.72 Aligned_cols=121 Identities=12% Similarity=0.050 Sum_probs=65.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEeC
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHPG 87 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~pg 87 (720)
.+||||+|.|..+..+++.+.+.|+..+.+.. .|.-.. +.+.-+.+.-. ..-...-.+.+.+.+++.+.+.-+-.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD-~D~Ve~-SNL~RQ~l~~~---~diG~~Ka~aaa~~L~~inP~v~v~~ 108 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVD-NGTVSY-SNPVRQALYNF---EDCGKPKAELAAASLKRIFPLMDATG 108 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEC-CCBCCT-TSTTTSTTCCG---GGTTSBHHHHHHHHHHHHCTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEec-CCEecc-ccccccccCCh---hhcChHHHHHHHHHHHHhCCCCEEEE
Confidence 46999999999999999999999998776642 221110 00000000000 00011224556666666665432222
Q ss_pred CC--------CCcc-------cHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCC
Q psy15251 88 YG--------FLSE-------NAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIP 138 (720)
Q Consensus 88 ~g--------~lsE-------~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~ 138 (720)
+. +.++ ...+...+....+.+-+.+.-. .+....+.+.++|+|..-
T Consensus 109 ~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~-----tR~lin~~c~~~~~plI~ 169 (340)
T 3rui_A 109 VKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE-----SRWLPSLLSNIENKTVIN 169 (340)
T ss_dssp ECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG-----GGHHHHHHHHHTTCEEEE
T ss_pred EeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH-----HHHHHHHHHHHcCCcEEE
Confidence 21 0110 1123456677777765543222 345667788889988754
No 484
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=57.43 E-value=6 Score=41.22 Aligned_cols=90 Identities=10% Similarity=0.086 Sum_probs=53.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEEe
Q psy15251 8 LDSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIHP 86 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~p 86 (720)
+.||.|+|.|.++...++.+++. +++++++++. +.... ..++++. + ...|.+.+.+ +...++|+|+.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~-~~~~~-~~~a~~~---g----~~~~~~~~~~---l~~~~~D~V~i 71 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADP-FIEGA-QRLAEAN---G----AEAVASPDEV---FARDDIDGIVI 71 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS-SHHHH-HHHHHTT---T----CEEESSHHHH---TTCSCCCEEEE
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC-CHHHH-HHHHHHc---C----CceeCCHHHH---hcCCCCCEEEE
Confidence 35899999999999999999987 7888877532 21110 1111110 0 1134555543 44567898876
Q ss_pred CCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 87 GYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 87 g~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
..-. ......+..+.++|..++.
T Consensus 72 ~tp~-~~h~~~~~~al~~gk~v~~ 94 (344)
T 3euw_A 72 GSPT-STHVDLITRAVERGIPALC 94 (344)
T ss_dssp CSCG-GGHHHHHHHHHHTTCCEEE
T ss_pred eCCc-hhhHHHHHHHHHcCCcEEE
Confidence 5421 2345566667777776553
No 485
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=57.41 E-value=8.4 Score=38.05 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=28.8
Q ss_pred CCCccCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 1 MTIASCVLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
|.|+. ..|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 1 M~~~~-~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 40 (250)
T 3nyw_A 1 MSLEK-QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARS 40 (250)
T ss_dssp ----C-CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC
T ss_pred CcccC-CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 44432 3578999985 789999999999999998888543
No 486
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=57.34 E-value=4.5 Score=41.65 Aligned_cols=149 Identities=13% Similarity=0.063 Sum_probs=73.7
Q ss_pred CCCccC-CCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHH
Q psy15251 1 MTIASC-VLDSILIANRGEIACRIMRTAKKM-GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVR 78 (720)
Q Consensus 1 m~~~~~-~~~~iLI~~~G~~a~~iira~~~~-G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~ 78 (720)
|+.+.+ ++.||.|+|.|.++...++.+++. +++++++++...... ..++++ +. .|.+.+. ++..
T Consensus 2 m~~p~~~~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~--~~~~~~-~~--------~~~~~~~---~l~~ 67 (315)
T 3c1a_A 2 MSIPANNSPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNL--ALVPPG-CV--------IESDWRS---VVSA 67 (315)
T ss_dssp -------CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHH--TTCCTT-CE--------EESSTHH---HHTC
T ss_pred CCCCCCCCcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHH--HHHHhh-Cc--------ccCCHHH---HhhC
Confidence 553332 235899999999999999999886 788777754321111 112222 11 2344443 3434
Q ss_pred cCCCEEEeCCCCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcccCC-CCCHHHHHHHHHHh
Q psy15251 79 SQCQAIHPGYGFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIPGYHGE-DQNEEILMEQAERI 157 (720)
Q Consensus 79 ~~~daI~pg~g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~~~~~~-~~s~~e~~~~~~~i 157 (720)
.++|+|+...-. ......+..+.+.|..++.-.+-++. ..+-..+.+++++.|+..-.++... ......+.+..+.+
T Consensus 68 ~~~D~V~i~tp~-~~h~~~~~~al~~Gk~v~~eKP~~~~-~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~l 145 (315)
T 3c1a_A 68 PEVEAVIIATPP-ATHAEITLAAIASGKAVLVEKPLTLD-LAEAEAVAAAAKATGVMVWVEHTQLFNPAWEALKADLTSI 145 (315)
T ss_dssp TTCCEEEEESCG-GGHHHHHHHHHHTTCEEEEESSSCSC-HHHHHHHHHHHHHHCCCEEEECGGGGCHHHHHHHHTHHHH
T ss_pred CCCCEEEEeCCh-HHHHHHHHHHHHCCCcEEEcCCCcCC-HHHHHHHHHHHHHcCCEEEEeechhcCHHHHHHHHHHHHc
Confidence 578988755421 22356666677778765532111110 0112234556666776643322100 11233344444456
Q ss_pred CCcEEEee
Q psy15251 158 GYPLMIKA 165 (720)
Q Consensus 158 g~PvvvKp 165 (720)
|-+..+..
T Consensus 146 G~i~~v~~ 153 (315)
T 3c1a_A 146 GPILAVRS 153 (315)
T ss_dssp CSEEEEEE
T ss_pred CCeEEEEE
Confidence 65555543
No 487
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=57.26 E-value=5.9 Score=41.31 Aligned_cols=95 Identities=9% Similarity=0.003 Sum_probs=55.2
Q ss_pred ccCCCCEEEEEcCc-HHHHHHHHHHHHc--CCcEEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcC
Q psy15251 4 ASCVLDSILIANRG-EIACRIMRTAKKM--GIRVVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQ 80 (720)
Q Consensus 4 ~~~~~~~iLI~~~G-~~a~~iira~~~~--G~~~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~ 80 (720)
.+..+-||.|+|.| .++...++++++. +++++++++. +... ...++++. -+ ...|.|.+.+ +...+
T Consensus 14 ~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~-~~~~-~~~~a~~~-~~-----~~~~~~~~~l---l~~~~ 82 (340)
T 1zh8_A 14 KPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR-TRSH-AEEFAKMV-GN-----PAVFDSYEEL---LESGL 82 (340)
T ss_dssp --CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS-SHHH-HHHHHHHH-SS-----CEEESCHHHH---HHSSC
T ss_pred CCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC-CHHH-HHHHHHHh-CC-----CcccCCHHHH---hcCCC
Confidence 33445599999999 7888889999887 5788777542 2111 11112210 00 1134565544 44567
Q ss_pred CCEEEeCCCCCcccHHHHHHHHHCCCeEeC
Q psy15251 81 CQAIHPGYGFLSENAEFANAVEGNRLIFVG 110 (720)
Q Consensus 81 ~daI~pg~g~lsE~~~~a~~~~~~gl~~~G 110 (720)
+|+|+..... ......+..+.++|..++.
T Consensus 83 vD~V~i~tp~-~~H~~~~~~al~aGkhVl~ 111 (340)
T 1zh8_A 83 VDAVDLTLPV-ELNLPFIEKALRKGVHVIC 111 (340)
T ss_dssp CSEEEECCCG-GGHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCc-hHHHHHHHHHHHCCCcEEE
Confidence 8988865421 2345667777778877654
No 488
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=57.21 E-value=13 Score=38.61 Aligned_cols=32 Identities=13% Similarity=0.130 Sum_probs=28.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 8 LDSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 8 ~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
...|+|+|+|.+++.++..|.+.|++|+++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEec
Confidence 35899999999999999999999999988853
No 489
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=57.17 E-value=4.9 Score=42.21 Aligned_cols=82 Identities=20% Similarity=0.114 Sum_probs=47.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCc-EEEEeeCCCCCCcccccccEEEEeCCCCCcccccCHHHHHHHHHHcCCCEEE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGIR-VVSVYSDIDADALHVKMADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQAIH 85 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~~-~v~v~s~~d~~~~~~~~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~daI~ 85 (720)
.-++|||.|.|.++.-+++.+|.+|.+ ++++..++.......+++|..+...-. ...+....+.+.++....++|.++
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~-~~~~~~~~~~v~~~t~g~g~Dvvi 257 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVE-RLSAEESAKKIVESFGGIEPAVAL 257 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECC-SCCHHHHHHHHHHHTSSCCCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhccccccc-ccchHHHHHHHHHHhCCCCCCEEE
Confidence 457899999999999999999999998 777754443322222335443321100 000001122333333345799998
Q ss_pred eCCC
Q psy15251 86 PGYG 89 (720)
Q Consensus 86 pg~g 89 (720)
-..|
T Consensus 258 d~~g 261 (363)
T 3m6i_A 258 ECTG 261 (363)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 6665
No 490
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=57.13 E-value=7.3 Score=41.62 Aligned_cols=79 Identities=16% Similarity=0.089 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEeeCCCCCCcccc-cccEEEEeCCCCCcccccCHHHHHHHHHHcCCCE
Q psy15251 6 CVLDSILIANRGEIACRIMRTAKKMGI-RVVSVYSDIDADALHVK-MADEAYRLEGKSSLDTYLNQAKILDIAVRSQCQA 83 (720)
Q Consensus 6 ~~~~~iLI~~~G~~a~~iira~~~~G~-~~v~v~s~~d~~~~~~~-~aD~~~~i~~~~~~~~~~~~~~i~~~a~~~~~da 83 (720)
+.-++|||.|.|.++.-+++.|+.+|. +++++...+.......+ =+|+.+.. .+....+.+.++....++|.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~------~~~~~~~~i~~~t~g~g~D~ 285 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDP------TKENFVEAVLDYTNGLGAKL 285 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECT------TTSCHHHHHHHHTTTCCCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcC------CCCCHHHHHHHHhCCCCCCE
Confidence 345799999999999999999999999 67776433322111111 15555421 11122345556555568999
Q ss_pred EEeCCCC
Q psy15251 84 IHPGYGF 90 (720)
Q Consensus 84 I~pg~g~ 90 (720)
++-..|.
T Consensus 286 vid~~g~ 292 (404)
T 3ip1_A 286 FLEATGV 292 (404)
T ss_dssp EEECSSC
T ss_pred EEECCCC
Confidence 9876653
No 491
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=57.06 E-value=11 Score=38.02 Aligned_cols=33 Identities=15% Similarity=0.067 Sum_probs=27.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 66 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRR 66 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 478999985 789999999999999998888543
No 492
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=57.01 E-value=7.1 Score=39.57 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=28.0
Q ss_pred EEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeCC
Q psy15251 10 SILIANR-GEIACRIMRTAKKMGIRVVSVYSDI 41 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~~ 41 (720)
||||.|+ |.++..+++.+.+.|++|++++...
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 34 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLS 34 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 7999996 8999999999999999998885433
No 493
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=57.00 E-value=13 Score=36.75 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=28.7
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999984 789999999999999998888543
No 494
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=56.97 E-value=11 Score=39.72 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=48.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEeeCCCCCCccccc-ccEEEEeCCCCCcccccC-HHHHHHHHHHcCCCE
Q psy15251 7 VLDSILIANRGEIACRIMRTAKKMGI-RVVSVYSDIDADALHVKM-ADEAYRLEGKSSLDTYLN-QAKILDIAVRSQCQA 83 (720)
Q Consensus 7 ~~~~iLI~~~G~~a~~iira~~~~G~-~~v~v~s~~d~~~~~~~~-aD~~~~i~~~~~~~~~~~-~~~i~~~a~~~~~da 83 (720)
.-++|||.|.|.++.-+++.++.+|. +++++..++.......++ +|+.+.. .+...+ .+.+.++... ++|.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~-----~~~~~~~~~~i~~~~~g-g~D~ 266 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNP-----KDHDKPIQEVIVDLTDG-GVDY 266 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECG-----GGCSSCHHHHHHHHTTS-CBSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEcc-----ccCchhHHHHHHHhcCC-CCCE
Confidence 45789999999999999999999999 787775444332222222 4554421 000122 3344444444 7999
Q ss_pred EEeCCC
Q psy15251 84 IHPGYG 89 (720)
Q Consensus 84 I~pg~g 89 (720)
++-..|
T Consensus 267 vid~~g 272 (378)
T 3uko_A 267 SFECIG 272 (378)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 986665
No 495
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=56.92 E-value=7 Score=43.19 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=28.9
Q ss_pred CCCccCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEee
Q psy15251 1 MTIASCVLDSILIANRGEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 1 m~~~~~~~~~iLI~~~G~~a~~iira~~~~G~~~v~v~s 39 (720)
|+|.+ +..+|+|+|+|..++.++..|++.|++|+++..
T Consensus 1 M~~~~-~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~ 38 (512)
T 3e1t_A 1 MSTRP-EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLER 38 (512)
T ss_dssp ----C-EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CCCCC-ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEcc
Confidence 55432 235899999999999999999999999888843
No 496
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=56.92 E-value=24 Score=34.98 Aligned_cols=32 Identities=19% Similarity=0.305 Sum_probs=27.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEee
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYS 39 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s 39 (720)
.|++||.|+ +.++..+++.+.+.|+++++++.
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~ 50 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYA 50 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 478999985 68999999999999999888754
No 497
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=56.90 E-value=15 Score=36.49 Aligned_cols=34 Identities=12% Similarity=0.179 Sum_probs=28.5
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
..|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 3578999985 679999999999999998888543
No 498
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=56.88 E-value=17 Score=36.35 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=28.0
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEeeC
Q psy15251 8 LDSILIANR-GEIACRIMRTAKKMGIRVVSVYSD 40 (720)
Q Consensus 8 ~~~iLI~~~-G~~a~~iira~~~~G~~~v~v~s~ 40 (720)
.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999984 789999999999999998887543
No 499
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=56.84 E-value=71 Score=33.80 Aligned_cols=127 Identities=9% Similarity=0.115 Sum_probs=71.1
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHc-C-CcEEEEeeCCCCCCcc---cccccEEEEeCCCC------------CcccccC
Q psy15251 7 VLDSILIANR-GEIACRIMRTAKKM-G-IRVVSVYSDIDADALH---VKMADEAYRLEGKS------------SLDTYLN 68 (720)
Q Consensus 7 ~~~~iLI~~~-G~~a~~iira~~~~-G-~~~v~v~s~~d~~~~~---~~~aD~~~~i~~~~------------~~~~~~~ 68 (720)
+|+||.|+|. |.++...++-+++. + ++++++..+.+..... ..+--..+.+.... ...-+..
T Consensus 3 ~m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~v~~g 82 (388)
T 1r0k_A 3 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAG 82 (388)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEES
T ss_pred CceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcEEEeC
Confidence 3589999999 99999988888886 3 7887774443321000 00000112111000 0000112
Q ss_pred HHHHHHHHHHcCCCEEEeCC-CCCcccHHHHHHHHHCCCeEeCCCHHHHHHhcCHHHHHHHHHHCCCCCCC
Q psy15251 69 QAKILDIAVRSQCQAIHPGY-GFLSENAEFANAVEGNRLIFVGPSSEAIRNMGIKSTSKEIMIKAEVPVIP 138 (720)
Q Consensus 69 ~~~i~~~a~~~~~daI~pg~-g~lsE~~~~a~~~~~~gl~~~Gp~~~~i~~~~DK~~~r~~l~~~Gvp~p~ 138 (720)
.+.+.+++... +|.|+-.. |... ......+.++|..++-.+.+++-. .=..+.++++++|+...|
T Consensus 83 ~~~~~el~~~~-iDvVV~ai~G~aG--l~ptlaAi~aGK~VvlANKE~lv~--~G~~l~~~A~~~gv~liP 148 (388)
T 1r0k_A 83 ADALVEAAMMG-ADWTMAAIIGCAG--LKATLAAIRKGKTVALANKESLVS--AGGLMIDAVREHGTTLLP 148 (388)
T ss_dssp HHHHHHHHTSC-CSEEEECCCSGGG--HHHHHHHHHTTSEEEECCSHHHHT--THHHHHHHHHHHTCEEEE
T ss_pred ccHHHHHHcCC-CCEEEEeCCCHHH--HHHHHHHHHCCCEEEEeCcHHHHh--hHHHHHHHHHHcCCEEEE
Confidence 45566777666 99998776 5322 344555667888877655565442 334455666777766644
No 500
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=56.80 E-value=39 Score=34.71 Aligned_cols=76 Identities=20% Similarity=0.091 Sum_probs=48.4
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc-CCcEEEEeeCCCC-CCccc-ccc--cEEEEeCCCCCcccccCHHHHHHHHHHcCCCE
Q psy15251 10 SILIANR-GEIACRIMRTAKKM-GIRVVSVYSDIDA-DALHV-KMA--DEAYRLEGKSSLDTYLNQAKILDIAVRSQCQA 83 (720)
Q Consensus 10 ~iLI~~~-G~~a~~iira~~~~-G~~~v~v~s~~d~-~~~~~-~~a--D~~~~i~~~~~~~~~~~~~~i~~~a~~~~~da 83 (720)
||||.|+ |.++..+++.+.+. |++++++...... ..... .+. .....+. .+..|.+.+.+++++.++|+
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~~~~~~~~~~~d~ 76 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEH-----ADICDSAEITRIFEQYQPDA 76 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEE-----CCTTCHHHHHHHHHHHCCSE
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEE-----CCCCCHHHHHHHHhhcCCCE
Confidence 6999985 89999999999888 7998888543211 10000 110 1111111 25567778888887778998
Q ss_pred EEeCCCC
Q psy15251 84 IHPGYGF 90 (720)
Q Consensus 84 I~pg~g~ 90 (720)
|+-.-+.
T Consensus 77 vih~A~~ 83 (361)
T 1kew_A 77 VMHLAAE 83 (361)
T ss_dssp EEECCSC
T ss_pred EEECCCC
Confidence 8865543
Done!