BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15257
(65 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BYZ6|RHBT2_HUMAN Rho-related BTB domain-containing protein 2 OS=Homo sapiens
GN=RHOBTB2 PE=2 SV=2
Length = 727
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 51/62 (82%)
Query: 4 DNEQPHQELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRIYKDT 63
D E+P+ E +KCVVVGD AVGKTRLICARACN ++ QLL THVPTVWAIDQYR+ ++
Sbjct: 6 DYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEV 65
Query: 64 LE 65
LE
Sbjct: 66 LE 67
>sp|Q91V93|RHBT2_MOUSE Rho-related BTB domain-containing protein 2 OS=Mus musculus
GN=Rhobtb2 PE=2 SV=2
Length = 728
Score = 96.7 bits (239), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 51/62 (82%)
Query: 4 DNEQPHQELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRIYKDT 63
D E+P+ E +KCVVVGD AVGKTRLICARACN ++ QLL THVPTVWAIDQYR+ ++
Sbjct: 6 DYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEV 65
Query: 64 LE 65
LE
Sbjct: 66 LE 67
>sp|Q9DAK3|RHBT1_MOUSE Rho-related BTB domain-containing protein 1 OS=Mus musculus
GN=Rhobtb1 PE=1 SV=2
Length = 695
Score = 96.3 bits (238), Expect = 5e-20, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 51/62 (82%)
Query: 4 DNEQPHQELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRIYKDT 63
D E+P+ E +KCVVVGD AVGKTRLICARACN ++ QLL THVPTVWAIDQYR+ ++
Sbjct: 6 DYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEV 65
Query: 64 LE 65
LE
Sbjct: 66 LE 67
>sp|O94844|RHBT1_HUMAN Rho-related BTB domain-containing protein 1 OS=Homo sapiens
GN=RHOBTB1 PE=1 SV=2
Length = 696
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%)
Query: 4 DNEQPHQELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRIYKDT 63
D E+P+ E +KCVVVGD AVGKTRLICARACN ++ QLL THVPTVWAIDQYR+ ++
Sbjct: 6 DYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEV 65
Query: 64 LE 65
LE
Sbjct: 66 LE 67
>sp|O94103|CDC42_COLGL Cell division control protein 42 homolog OS=Colletotrichum
gloeosporioides GN=CDC42 PE=3 SV=1
Length = 190
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 44
>sp|P40793|CDC42_DROME Cdc42 homolog OS=Drosophila melanogaster GN=Cdc42 PE=1 SV=1
Length = 191
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|Q16YG0|CDC42_AEDAE Cdc42 homolog OS=Aedes aegypti GN=Cdc42 PE=3 SV=1
Length = 191
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|Q29HY3|CDC42_DROPS Cdc42 homolog OS=Drosophila pseudoobscura pseudoobscura GN=Cdc42
PE=3 SV=1
Length = 191
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|Q17031|CDC42_ANOGA Cdc42 homolog OS=Anopheles gambiae GN=Cdc42 PE=2 SV=2
Length = 191
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|P53879|RHO5_YEAST GTP-binding protein RHO5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RHO5 PE=1 SV=2
Length = 331
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 8/45 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQY 57
+KCV++GD AVGKT L+ + N T +VPTV+ D Y
Sbjct: 4 IKCVIIGDGAVGKTSLLISYTTN------SFPTDYVPTVF--DNY 40
>sp|Q05062|CDC42_CAEEL Cell division control protein 42 homolog OS=Caenorhabditis
elegans GN=cdc-42 PE=1 SV=2
Length = 191
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|Q9SSX0|RAC1_ORYSJ Rac-like GTP-binding protein 1 OS=Oryza sativa subsp. japonica
GN=RAC1 PE=1 SV=1
Length = 214
Score = 36.2 bits (82), Expect = 0.058, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 12 LVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+KCV VGD AVGKT ++ CNK T ++PTV+
Sbjct: 10 FIKCVTVGDGAVGKTCMLICYTCNK------FPTDYIPTVF 44
>sp|Q8CFN2|CDC42_RAT Cell division control protein 42 homolog OS=Rattus norvegicus
GN=Cdc42 PE=1 SV=2
Length = 191
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|Q007T2|CDC42_PIG Cell division control protein 42 homolog OS=Sus scrofa GN=CDC42
PE=2 SV=2
Length = 191
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|P60766|CDC42_MOUSE Cell division control protein 42 homolog OS=Mus musculus GN=Cdc42
PE=1 SV=2
Length = 191
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|P60953|CDC42_HUMAN Cell division control protein 42 homolog OS=Homo sapiens GN=CDC42
PE=1 SV=2
Length = 191
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|P60952|CDC42_CANFA Cell division control protein 42 homolog OS=Canis familiaris
GN=CDC42 PE=2 SV=2
Length = 191
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|Q2KJ93|CDC42_BOVIN Cell division control protein 42 homolog OS=Bos taurus GN=CDC42
PE=1 SV=1
Length = 191
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|Q90694|CDC42_CHICK Cell division control protein 42 homolog OS=Gallus gallus
GN=CDC42 PE=2 SV=1
Length = 191
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV 42
>sp|Q01112|CDC42_SCHPO Cell division control protein 42 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cdc42 PE=1 SV=1
Length = 192
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + NK + +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSDYVPTVF--DNYAV 42
>sp|Q4R4R6|CDC42_MACFA Cell division control protein 42 homolog OS=Macaca fascicularis
GN=CDC42 PE=2 SV=1
Length = 191
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+KCVVVGD AVGKT L+ + NK + +VPTV+
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF 37
>sp|Q9HF56|CDC42_ASHGO Cell division control protein 42 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CDC42
PE=3 SV=1
Length = 191
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + N Q +VPTV+ D Y +
Sbjct: 4 LKCVVVGDGAVGKTCLLISYTTN------QFPADYVPTVF--DNYAV 42
>sp|P19073|CDC42_YEAST Cell division control protein 42 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC42 PE=1 SV=2
Length = 191
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + N Q +VPTV+ D Y +
Sbjct: 4 LKCVVVGDGAVGKTCLLISYTTN------QFPADYVPTVF--DNYAV 42
>sp|Q17QI8|RHOV_BOVIN Rho-related GTP-binding protein RhoV OS=Bos taurus GN=Rhov PE=2
SV=1
Length = 236
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 13 VKCVVVGDTAVGKTRLICARACN 35
+KCV+VGD AVGK+ LI + CN
Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCN 54
>sp|Q9Z1Y0|RHOV_RAT Rho-related GTP-binding protein RhoV OS=Rattus norvegicus GN=Rhov
PE=1 SV=1
Length = 236
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 13 VKCVVVGDTAVGKTRLICARACN 35
+KCV+VGD AVGK+ LI + CN
Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCN 54
>sp|Q8VDU1|RHOV_MOUSE Rho-related GTP-binding protein RhoV OS=Mus musculus GN=Rhov PE=2
SV=1
Length = 236
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 13 VKCVVVGDTAVGKTRLICARACN 35
+KCV+VGD AVGK+ LI + CN
Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCN 54
>sp|Q96L33|RHOV_HUMAN Rho-related GTP-binding protein RhoV OS=Homo sapiens GN=RHOV PE=2
SV=1
Length = 236
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 13 VKCVVVGDTAVGKTRLICARACN 35
+KCV+VGD AVGK+ LI + CN
Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCN 54
>sp|P19892|RAA5E_ARATH Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2
SV=1
Length = 218
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 1 MLSDNEQPHQELVKCVVVGDTAVGKTRLICARACNK 36
M SD+E + L K VV+GD+AVGK+ L+ A N+
Sbjct: 1 MSSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNE 36
>sp|Q9SIP0|RAA5D_ARATH Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=2
SV=1
Length = 219
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 1 MLSDNEQPHQELVKCVVVGDTAVGKTRLICARACNK 36
M SD+E + L K V++GD+AVGK+ L+ A N+
Sbjct: 1 MSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNE 36
>sp|C4YDI6|CDC42_CANAW Cell division control protein 42 homolog OS=Candida albicans
(strain WO-1) GN=CDC42 PE=3 SV=1
Length = 191
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + + S+ +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLIS------YTTSKFPADYVPTVF--DNYAV 42
>sp|P0CY33|CDC42_CANAL Cell division control protein 42 homolog OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=CDC42 PE=3 SV=1
Length = 191
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 13 VKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
+KCVVVGD AVGKT L+ + + S+ +VPTV+ D Y +
Sbjct: 4 IKCVVVGDGAVGKTCLLIS------YTTSKFPADYVPTVF--DNYAV 42
>sp|Q9JJL4|RHOQ_RAT Rho-related GTP-binding protein RhoQ OS=Rattus norvegicus GN=Rhoq
PE=2 SV=1
Length = 205
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Query: 8 PHQELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
P ++KCVVVGD AVGKT L+ + A + +VPTV+ D Y +
Sbjct: 5 PGALMLKCVVVGDGAVGKTCLLMSYAND------AFPEEYVPTVF--DHYAV 48
>sp|Q8R527|RHOQ_MOUSE Rho-related GTP-binding protein RhoQ OS=Mus musculus GN=Rhoq PE=1
SV=2
Length = 205
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Query: 8 PHQELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
P ++KCVVVGD AVGKT L+ + A + +VPTV+ D Y +
Sbjct: 5 PGALMLKCVVVGDGAVGKTCLLMSYAND------AFPEEYVPTVF--DHYAV 48
>sp|P17081|RHOQ_HUMAN Rho-related GTP-binding protein RhoQ OS=Homo sapiens GN=RHOQ PE=1
SV=2
Length = 205
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Query: 8 PHQELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
P ++KCVVVGD AVGKT L+ + A + +VPTV+ D Y +
Sbjct: 5 PGALMLKCVVVGDGAVGKTCLLMSYAND------AFPEEYVPTVF--DHYAV 48
>sp|Q9SU67|RAC8_ARATH Rac-like GTP-binding protein ARAC8 OS=Arabidopsis thaliana
GN=ARAC8 PE=1 SV=2
Length = 208
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 11 ELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+ +KCV VGD AVGKT ++ NK T ++PTV+
Sbjct: 7 KFIKCVTVGDGAVGKTCMLICYTSNK------FPTDYIPTVF 42
>sp|P92978|RAC11_ARATH Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana
GN=ARAC11 PE=1 SV=2
Length = 197
Score = 33.1 bits (74), Expect = 0.54, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 12 LVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
VKCV VGD AVGKT L+ + N T +VPTV+
Sbjct: 6 FVKCVTVGDGAVGKTCLLISYTSN------TFPTDYVPTVF 40
>sp|Q38912|RAC3_ARATH Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana
GN=ARAC3 PE=1 SV=1
Length = 198
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 12 LVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+KCV VGD AVGKT L+ + N T +VPTV+
Sbjct: 6 FIKCVTVGDGAVGKTCLLISYTSNT------FPTDYVPTVF 40
>sp|P28187|RAA5C_ARATH Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1
SV=1
Length = 214
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 1 MLSDNEQPHQELVKCVVVGDTAVGKTRLICARACNK 36
M D+E+ + L K V++GD+AVGK+ L+ A N+
Sbjct: 1 MSDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNE 36
>sp|Q9H4E5|RHOJ_HUMAN Rho-related GTP-binding protein RhoJ OS=Homo sapiens GN=RHOJ PE=2
SV=1
Length = 214
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 8/50 (16%)
Query: 10 QELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
++++KCVVVGD AVGKT L+ + A + +VPTV+ D Y +
Sbjct: 19 KKMLKCVVVGDGAVGKTCLLMSYAND------AFPEEYVPTVF--DHYAV 60
>sp|Q9SBJ6|RAC6_ARATH Rac-like GTP-binding protein ARAC6 OS=Arabidopsis thaliana
GN=ARAC6 PE=1 SV=2
Length = 197
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 12 LVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+KCV VGD AVGKT L+ + N T +VPTV+
Sbjct: 6 FIKCVTVGDGAVGKTCLLISYTSNT------FPTDYVPTVF 40
>sp|Q9ER71|RHOJ_MOUSE Rho-related GTP-binding protein RhoJ OS=Mus musculus GN=Rhoj PE=1
SV=2
Length = 214
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 5 NEQPHQELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQYRI 59
N ++KCVVVGD AVGKT L+ + A + +VPTV+ D Y +
Sbjct: 14 NGHEENRILKCVVVGDGAVGKTCLLMSYANDA------FPEEYVPTVF--DHYAV 60
>sp|O82481|RAC10_ARATH Rac-like GTP-binding protein ARAC10 OS=Arabidopsis thaliana
GN=ARAC10 PE=1 SV=1
Length = 215
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 11 ELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+ +KCV VGD AVGKT ++ NK T ++PTV+
Sbjct: 7 KFIKCVTVGDGAVGKTCMLICYTSNK------FPTDYIPTVF 42
>sp|Q38902|RAC1_ARATH Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana
GN=ARAC1 PE=2 SV=1
Length = 197
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 12 LVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+KCV VGD AVGKT L+ + N T +VPTV+
Sbjct: 6 FIKCVTVGDGAVGKTCLLISYTSNT------FPTDYVPTVF 40
>sp|Q67VP4|RAC4_ORYSJ Rac-like GTP-binding protein 4 OS=Oryza sativa subsp. japonica
GN=RAC4 PE=2 SV=1
Length = 215
Score = 32.7 bits (73), Expect = 0.68, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 12 LVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+KCV VGD AVGKT ++ NK T +VPTV+
Sbjct: 8 FIKCVTVGDGAVGKTCMLICYTSNK------FPTDYVPTVF 42
>sp|Q9XGU0|RAC9_ARATH Rac-like GTP-binding protein ARAC9 OS=Arabidopsis thaliana
GN=ARAC9 PE=2 SV=1
Length = 209
Score = 32.7 bits (73), Expect = 0.68, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 12 LVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+KCV VGD AVGKT L+ + N T +VPTV+
Sbjct: 18 FIKCVTVGDGAVGKTCLLISYTSN------TFPTDYVPTVF 52
>sp|Q39435|RAC1_BETVU Rac-like GTP-binding protein RHO1 OS=Beta vulgaris GN=RHO1 PE=2
SV=1
Length = 197
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 12 LVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+KCV VGD AVGKT L+ + N T +VPTV+
Sbjct: 6 FIKCVTVGDGAVGKTCLLISYTSN------TFPTDYVPTVF 40
>sp|Q35638|RHO1_PEA Rac-like GTP-binding protein RHO1 OS=Pisum sativum GN=RHO1 PE=2
SV=1
Length = 197
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 12 LVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+KCV VGD AVGKT L+ + N T +VPTV+
Sbjct: 6 FIKCVTVGDGAVGKTCLLISYTSN------TFPTDYVPTVF 40
>sp|Q38919|RAC4_ARATH Rac-like GTP-binding protein ARAC4 OS=Arabidopsis thaliana
GN=ARAC4 PE=1 SV=1
Length = 195
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Query: 10 QELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+KCV VGD AVGKT ++ + N T +VPTV+
Sbjct: 3 SRFIKCVTVGDGAVGKTCMLISYTSN------TFPTDYVPTVF 39
>sp|P34149|RACC_DICDI Rho-related protein racC OS=Dictyostelium discoideum GN=racC PE=1
SV=1
Length = 192
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 11 ELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVWAIDQY 57
E++K VV+GD AVGKT L+ + A N+ ++PTV+ D Y
Sbjct: 5 EVIKLVVIGDGAVGKTCLLISYANNR------FPEDYIPTVF--DNY 43
>sp|Q68Y52|RAC2_ORYSJ Rac-like GTP-binding protein 2 OS=Oryza sativa subsp. japonica
GN=RAC2 PE=2 SV=1
Length = 214
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 11 ELVKCVVVGDTAVGKTRLICARACNKQVSLSQLLTTHVPTVW 52
+ +KCV VGD AVGKT ++ NK T ++PTV+
Sbjct: 6 KFIKCVTVGDGAVGKTCMLICYTSNK------FPTDYIPTVF 41
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,396,044
Number of Sequences: 539616
Number of extensions: 598819
Number of successful extensions: 2241
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2148
Number of HSP's gapped (non-prelim): 98
length of query: 65
length of database: 191,569,459
effective HSP length: 37
effective length of query: 28
effective length of database: 171,603,667
effective search space: 4804902676
effective search space used: 4804902676
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)