Query psy15259
Match_columns 257
No_of_seqs 243 out of 1672
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 16:25:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ib7_A ICC protein; metallopho 99.5 1E-12 3.4E-17 117.1 16.0 89 64-189 23-112 (330)
2 2xmo_A LMO2642 protein; phosph 99.4 8.7E-13 3E-17 123.3 10.4 166 62-254 35-202 (443)
3 3d03_A Phosphohydrolase; glyce 99.4 3.9E-12 1.3E-16 110.3 13.5 123 67-254 1-125 (274)
4 2nxf_A Putative dimetal phosph 99.4 8.7E-13 3E-17 116.3 8.3 145 64-253 3-152 (322)
5 4fbw_A DNA repair protein RAD3 99.0 1.1E-09 3.6E-14 102.6 10.7 60 62-153 9-68 (417)
6 4fbk_A DNA repair and telomere 99.0 2E-09 6.7E-14 102.0 10.7 91 62-190 72-196 (472)
7 3t1i_A Double-strand break rep 98.9 2.8E-09 9.6E-14 100.2 10.6 90 62-189 28-151 (431)
8 2q8u_A Exonuclease, putative; 98.9 1.6E-09 5.3E-14 97.9 8.4 61 123-190 48-109 (336)
9 1ute_A Protein (II purple acid 98.9 2.5E-10 8.6E-15 100.2 2.5 89 65-190 5-95 (313)
10 3av0_A DNA double-strand break 98.9 1.8E-09 6.2E-14 99.7 7.0 94 62-191 16-109 (386)
11 1uf3_A Hypothetical protein TT 98.9 3.4E-09 1.1E-13 89.0 7.5 55 125-189 21-75 (228)
12 1ii7_A MRE11 nuclease; RAD50, 98.9 9.8E-09 3.3E-13 92.7 10.4 62 123-190 27-88 (333)
13 2yvt_A Hypothetical protein AQ 98.8 4.3E-09 1.5E-13 90.6 7.4 63 125-190 21-102 (260)
14 3tho_B Exonuclease, putative; 98.8 5.2E-09 1.8E-13 96.6 7.8 61 123-190 30-91 (379)
15 2qfp_A Purple acid phosphatase 98.8 2E-08 6.8E-13 93.4 11.7 110 128-253 137-247 (424)
16 1xzw_A Purple acid phosphatase 98.7 7.4E-08 2.5E-12 89.7 12.8 111 127-253 143-254 (426)
17 1xm7_A Hypothetical protein AQ 98.5 5.7E-08 2E-12 80.9 4.8 56 123-190 28-84 (195)
18 1nnw_A Hypothetical protein; s 98.4 1.8E-07 6.3E-12 80.3 5.6 57 124-190 16-76 (252)
19 1s3l_A Hypothetical protein MJ 98.4 5E-07 1.7E-11 75.4 7.3 50 123-190 39-88 (190)
20 3qfm_A SAPH, putative uncharac 98.4 8.5E-07 2.9E-11 78.0 9.1 128 62-249 7-136 (270)
21 1su1_A Hypothetical protein YF 98.4 3.5E-07 1.2E-11 77.4 5.9 62 123-190 39-101 (208)
22 2a22_A Vacuolar protein sortin 98.4 1.1E-06 3.9E-11 74.4 9.2 39 136-191 54-92 (215)
23 1z2w_A Vacuolar protein sortin 98.4 7E-07 2.4E-11 74.2 7.3 38 136-190 39-76 (192)
24 3rl5_A Metallophosphoesterase 98.3 1.8E-06 6.2E-11 77.2 8.1 46 136-190 78-123 (296)
25 3tgh_A Glideosome-associated p 98.3 2.5E-07 8.5E-12 84.4 2.1 67 123-191 21-87 (342)
26 3rqz_A Metallophosphoesterase; 98.2 7.7E-07 2.6E-11 76.7 3.8 54 124-193 18-71 (246)
27 2kkn_A Uncharacterized protein 98.1 5.1E-06 1.7E-10 68.6 6.9 44 128-190 43-86 (178)
28 1g5b_A Serine/threonine protei 97.9 1.5E-05 5.1E-10 67.4 6.0 54 123-190 26-79 (221)
29 3ck2_A Conserved uncharacteriz 97.9 1.5E-05 5.1E-10 65.1 5.8 44 124-190 21-64 (176)
30 2qjc_A Diadenosine tetraphosph 97.8 2.9E-05 9.7E-10 67.9 5.8 55 123-191 32-86 (262)
31 2dfj_A Diadenosinetetraphospha 97.6 4.7E-05 1.6E-09 67.3 5.3 55 124-190 15-69 (280)
32 4h2g_A 5'-nucleotidase; dimer, 97.5 0.00021 7.1E-09 68.7 8.8 60 122-189 58-117 (546)
33 2z1a_A 5'-nucleotidase; metal- 97.5 0.00014 4.7E-09 70.1 7.0 59 122-189 59-118 (552)
34 2yeq_A Apased, PHOD, alkaline 97.5 0.0025 8.7E-08 61.0 15.6 123 128-253 134-281 (527)
35 3qfk_A Uncharacterized protein 97.4 0.00092 3.1E-08 63.9 11.9 65 122-189 48-112 (527)
36 3ive_A Nucleotidase; structura 97.3 0.0003 1E-08 67.0 6.5 58 122-189 37-96 (509)
37 1hp1_A 5'-nucleotidase; metall 97.2 0.00065 2.2E-08 64.6 8.2 59 123-189 32-94 (516)
38 2z72_A Protein-tyrosine-phosph 97.0 0.0013 4.3E-08 59.6 7.4 59 124-190 85-153 (342)
39 2ie4_C PP2A-alpha;, serine/thr 97.0 0.0019 6.5E-08 57.9 7.9 60 124-192 64-123 (309)
40 1wao_1 Serine/threonine protei 97.0 0.002 6.9E-08 60.4 8.5 59 124-190 227-285 (477)
41 2wdc_A SOXB, sulfur oxidation 97.0 0.0014 4.7E-08 63.4 7.4 63 118-189 100-166 (562)
42 3h63_A Serine/threonine-protei 96.9 0.0037 1.3E-07 56.2 8.9 59 124-190 74-132 (315)
43 3e0j_A DNA polymerase subunit 96.8 0.0046 1.6E-07 58.5 9.6 55 136-190 243-309 (476)
44 3icf_A PPT, serine/threonine-p 96.8 0.0047 1.6E-07 55.9 8.9 59 124-190 78-136 (335)
45 1fjm_A Protein serine/threonin 96.8 0.0035 1.2E-07 56.7 8.0 59 123-190 70-128 (330)
46 3ztv_A NAD nucleotidase, NADN; 96.6 0.0042 1.4E-07 60.1 7.5 60 122-189 46-105 (579)
47 3e7a_A PP-1A, serine/threonine 96.6 0.0064 2.2E-07 54.2 8.1 59 123-190 69-127 (299)
48 4h1s_A 5'-nucleotidase; hydrol 96.4 0.01 3.5E-07 56.5 9.4 60 122-189 36-95 (530)
49 3ll8_A Serine/threonine-protei 96.2 0.012 4.1E-07 53.7 8.0 58 124-190 84-141 (357)
50 3gve_A YFKN protein; alpha-bet 96.0 0.014 4.9E-07 52.7 7.5 65 122-189 40-111 (341)
51 3c9f_A 5'-nucleotidase; 2',3'- 95.9 0.0063 2.2E-07 58.7 4.9 92 63-189 12-106 (557)
52 1aui_A Calcineurin, serine/thr 95.8 0.025 8.4E-07 54.0 8.4 58 124-190 97-154 (521)
53 3jyf_A 2',3'-cyclic nucleotide 95.4 0.052 1.8E-06 49.0 8.5 32 122-153 37-68 (339)
54 1t71_A Phosphatase, conserved 92.4 0.17 5.8E-06 44.6 5.5 56 123-190 20-75 (281)
55 3flo_A DNA polymerase alpha su 88.3 0.82 2.8E-05 42.9 6.5 87 108-199 153-257 (460)
56 2z06_A Putative uncharacterize 74.4 8.6 0.00029 33.0 7.2 53 123-189 16-68 (252)
57 1t70_A Phosphatase; crystal, X 70.2 12 0.0004 32.2 7.1 54 123-190 16-69 (255)
58 4h08_A Putative hydrolase; GDS 60.3 52 0.0018 25.5 8.9 58 123-184 61-118 (200)
59 3jte_A Response regulator rece 36.9 1E+02 0.0036 21.9 6.7 52 126-189 37-89 (143)
60 1es9_A PAF-AH, platelet-activa 36.6 1.4E+02 0.0048 23.6 8.0 45 136-183 92-136 (232)
61 3hv2_A Response regulator/HD d 35.8 1.1E+02 0.0037 22.3 6.7 50 126-188 48-97 (153)
62 3eod_A Protein HNR; response r 34.2 1.1E+02 0.0037 21.3 6.3 50 126-188 41-90 (130)
63 4e7p_A Response regulator; DNA 34.2 95 0.0033 22.5 6.1 50 126-188 56-105 (150)
64 3hdg_A Uncharacterized protein 33.6 91 0.0031 22.0 5.8 50 126-188 41-90 (137)
65 1y5e_A Molybdenum cofactor bio 33.5 90 0.0031 24.4 6.1 30 119-149 55-84 (169)
66 3iwt_A 178AA long hypothetical 32.2 97 0.0033 24.2 6.1 30 119-149 64-93 (178)
67 3hzh_A Chemotaxis response reg 31.8 1.2E+02 0.0042 22.1 6.5 51 126-188 71-122 (157)
68 3cz5_A Two-component response 31.0 1.5E+02 0.0051 21.4 7.1 50 126-188 41-90 (153)
69 2pbq_A Molybdenum cofactor bio 27.6 1.2E+02 0.0042 23.9 6.0 30 119-149 51-80 (178)
70 2qr3_A Two-component system re 27.6 1.2E+02 0.0041 21.3 5.6 50 126-188 37-91 (140)
71 3pzy_A MOG; ssgcid, seattle st 27.3 1E+02 0.0035 24.1 5.4 26 123-149 53-78 (164)
72 3fcs_B Integrin beta-3; beta p 26.5 22 0.00077 34.8 1.5 34 117-150 215-255 (690)
73 3i42_A Response regulator rece 26.4 1.6E+02 0.0054 20.3 6.0 51 126-189 37-89 (127)
74 1fxw_F Alpha2, platelet-activa 26.3 2.4E+02 0.0082 22.2 8.0 45 136-183 93-137 (229)
75 3dc7_A Putative uncharacterize 26.0 1.5E+02 0.0052 23.3 6.4 57 128-184 72-136 (232)
76 1mkz_A Molybdenum cofactor bio 25.6 1.8E+02 0.0063 22.6 6.7 30 119-149 52-81 (172)
77 3kcn_A Adenylate cyclase homol 25.4 1.7E+02 0.0057 21.1 6.2 52 126-189 37-88 (151)
78 2rjn_A Response regulator rece 25.2 1.4E+02 0.0049 21.5 5.7 50 126-188 41-90 (154)
79 2qsj_A DNA-binding response re 24.9 1.5E+02 0.0052 21.3 5.8 51 126-188 39-89 (154)
80 2r4f_A 3-hydroxy-3-methylgluta 24.8 65 0.0022 29.8 4.2 45 138-189 211-255 (441)
81 3w01_A Heptaprenylglyceryl pho 24.5 96 0.0033 26.1 4.9 48 130-190 30-77 (235)
82 3f6c_A Positive transcription 24.4 87 0.003 22.0 4.2 49 128-189 38-86 (134)
83 2qxy_A Response regulator; reg 24.0 1.9E+02 0.0065 20.3 6.6 49 126-188 38-86 (142)
84 2hsj_A Putative platelet activ 23.8 1.3E+02 0.0043 23.3 5.4 44 136-183 84-130 (214)
85 3eul_A Possible nitrate/nitrit 23.8 1.6E+02 0.0053 21.2 5.7 50 126-188 51-100 (152)
86 3cnb_A DNA-binding response re 23.4 1.9E+02 0.0064 20.2 6.0 50 126-188 44-95 (143)
87 2zay_A Response regulator rece 22.8 1.7E+02 0.006 20.7 5.7 50 126-188 42-93 (147)
88 1jlj_A Gephyrin; globular alph 22.0 2.6E+02 0.009 22.2 7.0 30 119-149 61-90 (189)
89 3nhm_A Response regulator; pro 21.9 2E+02 0.0069 19.8 6.7 51 126-189 37-89 (133)
90 3k6s_B Integrin beta-2; cell r 21.7 25 0.00086 34.5 0.8 34 117-150 207-246 (687)
91 3grc_A Sensor protein, kinase; 21.5 1.6E+02 0.0055 20.7 5.3 50 126-188 40-91 (140)
92 2rdm_A Response regulator rece 20.7 2.1E+02 0.0073 19.6 7.2 52 126-189 39-91 (132)
93 3kht_A Response regulator; PSI 20.5 2E+02 0.0069 20.3 5.7 84 126-222 41-131 (144)
94 2gkg_A Response regulator homo 20.5 1.6E+02 0.0054 20.0 4.9 49 126-188 39-90 (127)
95 2kqs_B Death domain-associated 20.3 59 0.002 17.8 1.8 17 62-78 8-24 (26)
No 1
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.47 E-value=1e-12 Score=117.14 Aligned_cols=89 Identities=20% Similarity=0.275 Sum_probs=63.1
Q ss_pred CCceeEEEecccCCCCCCCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHh-cCCccEEE
Q psy15259 64 GDEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKK-HKNISMVY 142 (257)
Q Consensus 64 ~~~~kvlhlSDiH~D~~Y~~g~~a~C~~~~CCr~~~~~~~~~~~~ag~~G~y~~CD~P~~l~~s~l~~i~~-~~~~dfii 142 (257)
.+.+||+|+||+|++.... +.+|. ..+...++.+++.+++ ..++||||
T Consensus 23 ~~~~ri~~iSD~H~~~~~~---------------------------~~~~~----~~~~~~l~~~l~~i~~~~~~~d~vi 71 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDR---------------------------RLYGA----VDADDRLGELLEQLNQSGLRPDAIV 71 (330)
T ss_dssp CCSEEEEEECCCCBCSSSC---------------------------CBTTT----BCHHHHHHHHHHHHHHHTCCCSEEE
T ss_pred CCCeEEEEEeCCccCCCCc---------------------------ccccc----cCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 4579999999999965321 12232 2367889999999987 46899999
Q ss_pred EcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 143 MTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 143 ~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
++||++++... .....+..+++.+.+.+ ++|||.++||||.
T Consensus 72 ~~GDl~~~~~~-----~~~~~~~~~l~~l~~~~-~~pv~~v~GNHD~ 112 (330)
T 3ib7_A 72 FTGDLADKGEP-----AAYRKLRGLVEPFAAQL-GAELVWVMGNHDD 112 (330)
T ss_dssp ECSCCBTTCCH-----HHHHHHHHHHHHHHHHH-TCEEEECCCTTSC
T ss_pred ECCCCCCCCCH-----HHHHHHHHHHHHHHhhc-CCCEEEeCCCCCC
Confidence 99999987642 22233344444444444 5899999999996
No 2
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.39 E-value=8.7e-13 Score=123.28 Aligned_cols=166 Identities=16% Similarity=0.196 Sum_probs=86.7
Q ss_pred CCCCceeEEEecccCCCCCCCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCccEE
Q psy15259 62 ASGDEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKKHKNISMV 141 (257)
Q Consensus 62 ~~~~~~kvlhlSDiH~D~~Y~~g~~a~C~~~~CCr~~~~~~~~~~~~ag~~G~y~~CD~P~~l~~s~l~~i~~~~~~dfi 141 (257)
...+.+||+|+||+|++..+..... ..... .....-|. ....+...++++++.+++ .++|+|
T Consensus 35 ~~~~~~~i~~iSD~H~~~~~~~~~~------~~~~~---------~~~~~~~~--~~~~~~~~l~~~~~~~~~-~~~d~v 96 (443)
T 2xmo_A 35 EKDRNLSMVVTTDVHYFAPSLTDNG------KAFEK---------YVAAGDGK--QLAYSDEITDAFLADVES-KKTDVL 96 (443)
T ss_dssp CSCCCEEEEEECCCCBCCGGGBCCC------HHHHH---------HHHTSTTC--CGGGHHHHHHHHHHHHHH-HTCSEE
T ss_pred cCCCCeEEEEEeCCCCCCccccccc------hhhhc---------cccccccc--ccccHHHHHHHHHHHHHH-cCCCEE
Confidence 3456799999999999754311000 00000 00000011 122367889999998876 478999
Q ss_pred EEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCCCCCCCCCCCCCC-CCh-hhHHHHHHHHHhc
Q psy15259 142 YMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHPVNVFSPYFVQGP-TST-SWVYESFIQYWGW 219 (257)
Q Consensus 142 i~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P~n~f~~~~~~~~-~~~-~w~~~~l~~~w~~ 219 (257)
|++||++++..+. ....+..+.+.+.+ .++||+.++||||.... +........ ... .+-.+.+.+.|..
T Consensus 97 i~~GDl~~~~~~~-----~~~~~~~~l~~l~~--~~~~~~~v~GNHD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (443)
T 2xmo_A 97 IISGDLTNNGEKT-----SHEELAKKLTQVEK--NGTQVFVVPGNHDINNP--WARKFEKDKQLPTDTISPTDFSKIYSD 167 (443)
T ss_dssp EEESCCBSSCCHH-----HHHHHHHHHHHHHH--TTCEEEEECCTTTSSCT--TCEEEETTEEEECCCCCHHHHHHHTCC
T ss_pred EECCCCCCCCCHH-----HHHHHHHHHHHHHh--CCCeEEEECCcCCCCCc--cccccCCcccccccccCHHHHHHHhhh
Confidence 9999999877532 11222223333321 26899999999998532 111100000 000 0111222233332
Q ss_pred cCChhHHhhhhcCceEEEeecCCeEEEEEcCcccc
Q psy15259 220 SLPESARQTFLKGGYYSFLTEKNLRIIVLNTNVYQ 254 (257)
Q Consensus 220 wl~~~~~~~~~~~GyYs~~~~~glriIsLNtn~~y 254 (257)
+-.......-..+..|.+...+++|||+|||+.+.
T Consensus 168 ~~~~~~~~~~~~~~~y~~~~~~~~~~i~Lds~~~~ 202 (443)
T 2xmo_A 168 FGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYK 202 (443)
T ss_dssp CCCTTCSEECSSSSCEEECSBSSEEEEECCCBCCT
T ss_pred cChhhhhccCCCCceEEEecCCCEEEEEeeCCCcC
Confidence 11111100011245677777889999999999764
No 3
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.39 E-value=3.9e-12 Score=110.27 Aligned_cols=123 Identities=16% Similarity=0.256 Sum_probs=78.4
Q ss_pred eeEEEecccCCCCCCCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHh-cCCccEEEEcC
Q psy15259 67 ISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKK-HKNISMVYMTG 145 (257)
Q Consensus 67 ~kvlhlSDiH~D~~Y~~g~~a~C~~~~CCr~~~~~~~~~~~~ag~~G~y~~CD~P~~l~~s~l~~i~~-~~~~dfii~TG 145 (257)
|||+|+||+|++... ...+| +..+...++.+++.+++ .+++|+||++|
T Consensus 1 mri~~iSD~H~~~~~---------------------------~~~~g----~~~~~~~l~~~l~~~~~~~~~~d~vi~~G 49 (274)
T 3d03_A 1 MLLAHISDTHFRSRG---------------------------EKLYG----FIDVNAANADVVSQLNALRERPDAVVVSG 49 (274)
T ss_dssp CEEEEECCCCBCSTT---------------------------CCBTT----TBCHHHHHHHHHHHHHTCSSCCSEEEEES
T ss_pred CEEEEEecCCcCCCC---------------------------ccccc----ccCHHHHHHHHHHHHHhcCCCCCEEEECC
Confidence 689999999997421 01222 34477889999999987 45799999999
Q ss_pred CCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHhc-cCChh
Q psy15259 146 DLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHPVNVFSPYFVQGPTSTSWVYESFIQYWGW-SLPES 224 (257)
Q Consensus 146 D~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P~n~f~~~~~~~~~~~~w~~~~l~~~w~~-wl~~~ 224 (257)
|++++... ...+.+.+.|++ + ++|+|.++||||... .+.+.+.. |++..
T Consensus 50 Dl~~~~~~--------~~~~~~~~~l~~-l-~~p~~~v~GNHD~~~--------------------~~~~~~~~~~~~~~ 99 (274)
T 3d03_A 50 DIVNCGRP--------EEYQVARQILGS-L-NYPLYLIPGNHDDKA--------------------LFLEYLQPLCPQLG 99 (274)
T ss_dssp CCBSSCCH--------HHHHHHHHHHTT-C-SSCEEEECCTTSCHH--------------------HHHHHHGGGSGGGC
T ss_pred CCCCCCCH--------HHHHHHHHHHHh-c-CCCEEEECCCCCCHH--------------------HHHHHhhhhhcCcc
Confidence 99987642 122344444543 3 589999999999621 01122222 33100
Q ss_pred HHhhhhcCceEEEeecCCeEEEEEcCcccc
Q psy15259 225 ARQTFLKGGYYSFLTEKNLRIIVLNTNVYQ 254 (257)
Q Consensus 225 ~~~~~~~~GyYs~~~~~glriIsLNtn~~y 254 (257)
.. ....+|++. ..++|||+|||..+.
T Consensus 100 ~~---~~~~~~~~~-~~~~~~i~ld~~~~~ 125 (274)
T 3d03_A 100 SD---ANNMRCAVD-DFATRLLFIDSSRAG 125 (274)
T ss_dssp SC---GGGCCEEEC-SSSSEEEECCCCCTT
T ss_pred cC---CCceEEEEE-eCCEEEEEEeCCCCC
Confidence 00 011356665 578999999998653
No 4
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.37 E-value=8.7e-13 Score=116.29 Aligned_cols=145 Identities=17% Similarity=0.175 Sum_probs=84.1
Q ss_pred CCceeEEEecccCCCCCCCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCccEEEE
Q psy15259 64 GDEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKKHKNISMVYM 143 (257)
Q Consensus 64 ~~~~kvlhlSDiH~D~~Y~~g~~a~C~~~~CCr~~~~~~~~~~~~ag~~G~y~~CD~P~~l~~s~l~~i~~~~~~dfii~ 143 (257)
.+.+||+||||+|++........ .+.-..+ ...+...++.+++.+++ .++||||+
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~----------------------~~~~~~~--~~~~~~~l~~~~~~~~~-~~~d~vi~ 57 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENY----------------------LRTRRRY--YRGSADLLRDAVLQWRR-ERVQCVVQ 57 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECT----------------------TSSSEEC--TTHHHHHHHHHHHHHHH-TTCSEEEE
T ss_pred CCceEEEEEeeccccccCccccc----------------------ccchHHH--HHHHHHHHHHHHHHHHh-cCCCEEEE
Confidence 35699999999999864221000 0000011 22356788888988876 68999999
Q ss_pred cCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHhccC--
Q psy15259 144 TGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHPVNVFSPYFVQGPTSTSWVYESFIQYWGWSL-- 221 (257)
Q Consensus 144 TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P~n~f~~~~~~~~~~~~w~~~~l~~~w~~wl-- 221 (257)
+||++++...... ...+.++.+.+.|++ + ++|||+++||||.+.. .. +.+.+.+....
T Consensus 58 ~GD~~~~~~~~~~--~~~~~~~~~~~~l~~-~-~~p~~~v~GNHD~~~~---~~-------------~~~~~~~~~~~~~ 117 (322)
T 2nxf_A 58 LGDIIDGHNRRRD--ASDRALDTVMAELDA-C-SVDVHHVWGNHEFYNF---SR-------------PSLLSSRLNSAQR 117 (322)
T ss_dssp CSCCBCTHHHHTT--CHHHHHHHHHHHHHT-T-CSEEEECCCHHHHHHC---CH-------------HHHHTSTTCCCC-
T ss_pred CCCccCCCCCcch--HHHHHHHHHHHHHHh-c-CCcEEEecCCCCcccC---CH-------------HHHhhhhCCcccc
Confidence 9999987642110 012334555666654 3 5899999999998411 10 00111111000
Q ss_pred -ChhHHhhh--hcCceEEEeecCCeEEEEEcCccc
Q psy15259 222 -PESARQTF--LKGGYYSFLTEKNLRIIVLNTNVY 253 (257)
Q Consensus 222 -~~~~~~~~--~~~GyYs~~~~~glriIsLNtn~~ 253 (257)
.......+ ....||++...+++|+|+|||+.+
T Consensus 118 ~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ld~~~~ 152 (322)
T 2nxf_A 118 TGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDL 152 (322)
T ss_dssp -----CEECGGGTCCCEEEEEETTEEEEECCTTSB
T ss_pred cccccccccCCCCceEEEEecCCCEEEEEEcCcee
Confidence 00000011 234678887658999999999875
No 5
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.02 E-value=1.1e-09 Score=102.65 Aligned_cols=60 Identities=15% Similarity=0.193 Sum_probs=43.3
Q ss_pred CCCCceeEEEecccCCCCCCCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCccEE
Q psy15259 62 ASGDEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKKHKNISMV 141 (257)
Q Consensus 62 ~~~~~~kvlhlSDiH~D~~Y~~g~~a~C~~~~CCr~~~~~~~~~~~~ag~~G~y~~CD~P~~l~~s~l~~i~~~~~~dfi 141 (257)
...+.+||+|+||+|++.... |..+ -+.....++.+++.+.+ .++|+|
T Consensus 9 ~~~~~mrilhiSDlHLg~~~~------------------------------~~~~-~~d~~~~l~~lv~~~~~-~~~D~V 56 (417)
T 4fbw_A 9 HNENTIRILISSDPHVGYGEK------------------------------DPVR-GNDSFVSFNEILEIARE-RDVDMI 56 (417)
T ss_dssp -CTTCEEEEEECCCCBTTTTT------------------------------CTTT-TTHHHHHHHHHHHHHHH-TTCSEE
T ss_pred CCCCCeEEEEEEcCCCCCccc------------------------------cccc-chhHHHHHHHHHHHHHh-cCCCEE
Confidence 456789999999999974321 0111 12256788889988887 589999
Q ss_pred EEcCCCCcCccc
Q psy15259 142 YMTGDLVAHAIW 153 (257)
Q Consensus 142 i~TGD~v~H~~~ 153 (257)
|+|||+++....
T Consensus 57 liaGDLfd~~~p 68 (417)
T 4fbw_A 57 LLGGDIFHDNKP 68 (417)
T ss_dssp EECSCCBSSSSC
T ss_pred EEcCccccCCCC
Confidence 999999977654
No 6
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=98.98 E-value=2e-09 Score=102.01 Aligned_cols=91 Identities=21% Similarity=0.276 Sum_probs=61.9
Q ss_pred CCCCceeEEEecccCCCCCCCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCccEE
Q psy15259 62 ASGDEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKKHKNISMV 141 (257)
Q Consensus 62 ~~~~~~kvlhlSDiH~D~~Y~~g~~a~C~~~~CCr~~~~~~~~~~~~ag~~G~y~~CD~P~~l~~s~l~~i~~~~~~dfi 141 (257)
.....+||+|+||+|++.... |..+ -+.....++.+++.+.+ .++|+|
T Consensus 72 ~~~~~mrilhiSDlHLG~~~~------------------------------~~~~-~~d~~~~l~~lv~~~~~-~~~D~V 119 (472)
T 4fbk_A 72 GSENTIRILISSDPHVGYGEK------------------------------DPVR-GNDSFVSFNEILEIARE-RDVDMI 119 (472)
T ss_dssp -CTTCEEEEEECCCCBTTTTT------------------------------CTTT-TTHHHHHHHHHHHHHHH-TTCSEE
T ss_pred CCCCCeEEEEEecccCCCccc------------------------------Cccc-chhHHHHHHHHHHHHHh-cCCCEE
Confidence 446789999999999975321 0011 12256788888988887 589999
Q ss_pred EEcCCCCcCcccccCHHHHHHHHHHHHHHHHHH-----------------------h-----------CCCCEEEecCCC
Q psy15259 142 YMTGDLVAHAIWETSRAKNIEVMKVVAELFREY-----------------------L-----------GDIPVIPIIGNH 187 (257)
Q Consensus 142 i~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~-----------------------~-----------~~~pv~~~lGNH 187 (257)
|+|||++++.... .+ ++..+.+.|+++ | .++|||.+.|||
T Consensus 120 liaGDLfd~~~ps--~~----a~~~~~~~Lr~~~~g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNH 193 (472)
T 4fbk_A 120 LLGGDIFHDNKPS--RK----ALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNH 193 (472)
T ss_dssp EECSCSBSSSSCC--HH----HHHHHHHHHHHHHBSSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCC
T ss_pred EEcCccccCCCCC--HH----HHHHHHHHHHHhcccCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCC
Confidence 9999999876542 22 333334444431 1 279999999999
Q ss_pred CCC
Q psy15259 188 ETH 190 (257)
Q Consensus 188 D~~ 190 (257)
|..
T Consensus 194 D~~ 196 (472)
T 4fbk_A 194 DDP 196 (472)
T ss_dssp CSC
T ss_pred CCc
Confidence 974
No 7
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=98.95 E-value=2.8e-09 Score=100.15 Aligned_cols=90 Identities=23% Similarity=0.374 Sum_probs=60.7
Q ss_pred CCCCceeEEEecccCCCCCCCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCccEE
Q psy15259 62 ASGDEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKKHKNISMV 141 (257)
Q Consensus 62 ~~~~~~kvlhlSDiH~D~~Y~~g~~a~C~~~~CCr~~~~~~~~~~~~ag~~G~y~~CD~P~~l~~s~l~~i~~~~~~dfi 141 (257)
.....+||+|+||+|++..... ..+ -+.....++.+++.+++ .++|+|
T Consensus 28 ~~~~~mrilhiSDlHLg~~~~~------------------------------~~~-~~d~~~~l~~ll~~~~~-~~~D~V 75 (431)
T 3t1i_A 28 DDENTFKILVATDIHLGFMEKD------------------------------AVR-GNDTFVTLDEILRLAQE-NEVDFI 75 (431)
T ss_dssp CGGGEEEEEEECCCCBTTTSSC------------------------------TTT-TTHHHHHHHHHHHHHHH-TTCSEE
T ss_pred CCCCCEEEEEEeccCCCCcccc------------------------------cch-hhhHHHHHHHHHHHHhh-cCCCEE
Confidence 3457899999999999753110 000 12245678888888876 589999
Q ss_pred EEcCCCCcCcccccCHHHHHHHHHHHHHHHHHH-----------------------h-----------CCCCEEEecCCC
Q psy15259 142 YMTGDLVAHAIWETSRAKNIEVMKVVAELFREY-----------------------L-----------GDIPVIPIIGNH 187 (257)
Q Consensus 142 i~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~-----------------------~-----------~~~pv~~~lGNH 187 (257)
|++||+++..... . +++..+.+.|+++ | .++|||.+.|||
T Consensus 76 liaGDlfd~~~~~--~----~~~~~~~~~L~r~~~~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNH 149 (431)
T 3t1i_A 76 LLGGDLFHENKPS--R----KTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNH 149 (431)
T ss_dssp EECSCCBSSSSCC--H----HHHHHHHHHHHHHHBCSSCCCCEECSCC------------------CCBCSCEEECCCSS
T ss_pred EEcCccccCCCCC--H----HHHHHHHHHHHHHhccCCcccceeccchhhccccccccccccccccccCCCcEEEEccCC
Confidence 9999999766532 2 2333444444432 1 269999999999
Q ss_pred CC
Q psy15259 188 ET 189 (257)
Q Consensus 188 D~ 189 (257)
|.
T Consensus 150 D~ 151 (431)
T 3t1i_A 150 DD 151 (431)
T ss_dssp SC
T ss_pred CC
Confidence 96
No 8
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=98.94 E-value=1.6e-09 Score=97.94 Aligned_cols=61 Identities=18% Similarity=0.321 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCC-CCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGD-LVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD-~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
..++.+++.+++ .++|+||++|| +++..... .+ .......+++.|.+. +|||.++||||..
T Consensus 48 ~~l~~lv~~~~~-~~~D~vliaGD~l~d~~~~~--~~-~~~~~~~~l~~L~~~---~pv~~i~GNHD~~ 109 (336)
T 2q8u_A 48 KALDKVVEEAEK-REVDLILLTGDLLHSRNNPS--VV-ALHDLLDYLKRMMRT---APVVVLPGNHDWK 109 (336)
T ss_dssp HHHHHHHHHHHH-HTCSEEEEESCSBSCSSCCC--HH-HHHHHHHHHHHHHHH---SCEEECCC-----
T ss_pred HHHHHHHHHHHH-hCCCEEEECCccccCCCCCC--HH-HHHHHHHHHHHHHhc---CCEEEECCCCCcc
Confidence 566777777765 47999999999 88765432 11 122223334444432 7899999999974
No 9
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=98.93 E-value=2.5e-10 Score=100.16 Aligned_cols=89 Identities=13% Similarity=0.197 Sum_probs=49.4
Q ss_pred CceeEEEecccCCCCCCCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCccEEEEc
Q psy15259 65 DEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKKHKNISMVYMT 144 (257)
Q Consensus 65 ~~~kvlhlSDiH~D~~Y~~g~~a~C~~~~CCr~~~~~~~~~~~~ag~~G~y~~CD~P~~l~~s~l~~i~~~~~~dfii~T 144 (257)
..+||+|+||+|+.... .|+ .+....+.+.+.+.+++ .++||||++
T Consensus 5 ~~~~~~~isD~h~~~~~-----------------------------~~~----~~~~~~~~~~l~~~~~~-~~~d~vv~~ 50 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNA-----------------------------PFH----TAREMANAKAIATTVKT-LGADFILSL 50 (313)
T ss_dssp CCEEEEEECSCCCCSST-----------------------------TSS----CHHHHHHHHHHHHHHHH-HCCSEEEEC
T ss_pred CceEEEEEcccCCCCCc-----------------------------ccc----CchHHHHHHHHHHHHHh-cCCCEEEEC
Confidence 57999999999986421 111 11122444444444544 489999999
Q ss_pred CCCCcCcc-cccCHHHHHHHHHHHHHHHH-HHhCCCCEEEecCCCCCC
Q psy15259 145 GDLVAHAI-WETSRAKNIEVMKVVAELFR-EYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 145 GD~v~H~~-~~~s~~~~~~~~~~~~~~l~-~~~~~~pv~~~lGNHD~~ 190 (257)
||++.... .....+...+.++. .+. ..+.++|+|+++||||..
T Consensus 51 GD~~~~~g~~~~~~~~~~~~~~~---~~~~~~l~~~p~~~v~GNHD~~ 95 (313)
T 1ute_A 51 GDNFYFTGVHDAKDKRFQETFED---VFSDPSLRNVPWHVLAGNHDHL 95 (313)
T ss_dssp SCCSTTTCCSSTTCTHHHHHTTT---TSCSGGGTTCCEEECCCHHHHH
T ss_pred CCccCcCCCCCcchHHHHHHHHH---HcCchhhcCCCEEEECCCCccC
Confidence 99965321 11111111111111 111 123368999999999974
No 10
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=98.89 E-value=1.8e-09 Score=99.68 Aligned_cols=94 Identities=17% Similarity=0.244 Sum_probs=56.5
Q ss_pred CCCCceeEEEecccCCCCCCCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCccEE
Q psy15259 62 ASGDEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKKHKNISMV 141 (257)
Q Consensus 62 ~~~~~~kvlhlSDiH~D~~Y~~g~~a~C~~~~CCr~~~~~~~~~~~~ag~~G~y~~CD~P~~l~~s~l~~i~~~~~~dfi 141 (257)
+....|||+|+||+|++.... +... +. .-....++.+++.+.+ .++|+|
T Consensus 16 ~~~~~mrilhiSD~Hlg~~~~-~~~~----------------------------r~-~~~~~~l~~~v~~~~~-~~~D~V 64 (386)
T 3av0_A 16 PRGSHMMFVHIADNHLGYRQY-NLDD----------------------------RE-KDIYDSFKLCIKKILE-IKPDVV 64 (386)
T ss_dssp --CCCCEEEEECCCCBTCCGG-GCHH----------------------------HH-HHHHHHHHHHHHHHHT-TCCSEE
T ss_pred cCCCCeEEEEEccCCCCcccc-Ccch----------------------------hh-HHHHHHHHHHHHHHHH-cCCCEE
Confidence 455679999999999974210 0000 00 0013456777777765 589999
Q ss_pred EEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCC
Q psy15259 142 YMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHP 191 (257)
Q Consensus 142 i~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P 191 (257)
|++||+++..... .+ ....+..+++.|++ .++|||.++||||...
T Consensus 65 liaGDl~d~~~p~--~~-~~~~~~~~l~~L~~--~~~pv~~v~GNHD~~~ 109 (386)
T 3av0_A 65 LHSGDLFNDLRPP--VK-ALRIAMQAFKKLHE--NNIKVYIVAGNHEMPR 109 (386)
T ss_dssp EECSCSBSSSSCC--HH-HHHHHHHHHHHHHH--TTCEEEECCCGGGSCS
T ss_pred EECCCCCCCCCCC--HH-HHHHHHHHHHHHHh--cCCcEEEEcCCCCCCc
Confidence 9999999876422 11 11122223333332 2589999999999753
No 11
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=98.88 E-value=3.4e-09 Score=88.98 Aligned_cols=55 Identities=11% Similarity=0.221 Sum_probs=37.9
Q ss_pred HHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 125 IRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 125 ~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
++.+++.+++ .++|+||++||+++.... . +....+.+.|++. +.|||.++||||.
T Consensus 21 ~~~~~~~~~~-~~~D~vi~~GDl~~~~~~---~----~~~~~~~~~l~~~--~~pv~~v~GNHD~ 75 (228)
T 1uf3_A 21 LEKFVKLAPD-TGADAIALIGNLMPKAAK---S----RDYAAFFRILSEA--HLPTAYVPGPQDA 75 (228)
T ss_dssp HHHHHTHHHH-HTCSEEEEESCSSCTTCC---H----HHHHHHHHHHGGG--CSCEEEECCTTSC
T ss_pred HHHHHHHHhh-cCCCEEEECCCCCCCCCC---H----HHHHHHHHHHHhc--CCcEEEECCCCCc
Confidence 5566666655 379999999999976521 1 1233445555543 4799999999996
No 12
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.86 E-value=9.8e-09 Score=92.71 Aligned_cols=62 Identities=26% Similarity=0.452 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
..++.+++.+.+ .++|+||++||++++... +.+ .......+++.+++ .++|||.++||||..
T Consensus 27 ~~~~~~~~~~~~-~~~D~vl~~GDl~d~~~~--~~~-~~~~~~~~l~~l~~--~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 27 EAFKNALEIAVQ-ENVDFILIAGDLFHSSRP--SPG-TLKKAIALLQIPKE--HSIPVFAIEGNHDRT 88 (333)
T ss_dssp HHHHHHHHHHHH-TTCSEEEEESCSBSSSSC--CHH-HHHHHHHHHHHHHT--TTCCEEEECCTTTCC
T ss_pred HHHHHHHHHHHh-cCCCEEEECCCcCCCCCC--CHH-HHHHHHHHHHHHHH--CCCcEEEeCCcCCCc
Confidence 345556665554 589999999999986532 221 12222223333332 258999999999974
No 13
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=98.85 E-value=4.3e-09 Score=90.59 Aligned_cols=63 Identities=14% Similarity=0.246 Sum_probs=38.6
Q ss_pred HHHHHHHHHhcCCccEEEEcCCCCcCccccc------------CHHHH-------HHHHHHHHHHHHHHhCCCCEEEecC
Q psy15259 125 IRSALEQIKKHKNISMVYMTGDLVAHAIWET------------SRAKN-------IEVMKVVAELFREYLGDIPVIPIIG 185 (257)
Q Consensus 125 ~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~------------s~~~~-------~~~~~~~~~~l~~~~~~~pv~~~lG 185 (257)
++.+++.+++ .++|+||++||+++...... .++.. .+....+.+.|++. +.|||.++|
T Consensus 21 ~~~~l~~~~~-~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~l~~~--~~pv~~v~G 97 (260)
T 2yvt_A 21 LPKLKGVIAE-KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFREIGEL--GVKTFVVPG 97 (260)
T ss_dssp HHHHHHHHHH-HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECC
T ss_pred HHHHHHHHHh-cCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHHHHhc--CCcEEEEcC
Confidence 4556666665 47999999999997653200 00000 12233444445432 489999999
Q ss_pred CCCCC
Q psy15259 186 NHETH 190 (257)
Q Consensus 186 NHD~~ 190 (257)
|||..
T Consensus 98 NHD~~ 102 (260)
T 2yvt_A 98 KNDAP 102 (260)
T ss_dssp TTSCC
T ss_pred CCCch
Confidence 99973
No 14
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=98.83 E-value=5.2e-09 Score=96.55 Aligned_cols=61 Identities=18% Similarity=0.316 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCC-cCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLV-AHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v-~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
..++.+++.+.+ .++|+||++||++ +.... +. .....+..+...|++. +|||.+.||||..
T Consensus 30 ~~l~~l~~~~~~-~~~D~vliaGDl~hd~~~~--~~-~~~~~~~~~l~~l~~~---~~v~~i~GNHD~~ 91 (379)
T 3tho_B 30 KALDKVVEEAEK-REVDLILLTGDLLHSRNNP--SV-VALHDLLDYLKRMMRT---APVVVLPGNQDWK 91 (379)
T ss_dssp HHHHHHHHHHHH-HTCSEEEECSCCBSCSSSC--CH-HHHHHHHHHHHHHHHH---SCEEECCCTTSCT
T ss_pred HHHHHHHHHHHh-cCCCEEEECCCccccCCCC--CH-HHHHHHHHHHHHHHhC---CCEEEEcCCCccc
Confidence 455555555554 4899999999999 54432 22 2222334444555543 7899999999953
No 15
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=98.83 E-value=2e-08 Score=93.44 Aligned_cols=110 Identities=20% Similarity=0.207 Sum_probs=61.1
Q ss_pred HHHHHHh-cCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCCCCCCCCCCCCCCCCh
Q psy15259 128 ALEQIKK-HKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHPVNVFSPYFVQGPTST 206 (257)
Q Consensus 128 ~l~~i~~-~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P~n~f~~~~~~~~~~~ 206 (257)
+++++++ ..++||||++||++..+.+....+...+....+.+.+ ...+|+|+++||||...... .... .
T Consensus 137 ~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~---~~~~P~~~v~GNHD~~~~~~-----~~~~--~ 206 (424)
T 2qfp_A 137 TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS---VAYQPWIWTAGNHEIEFAPE-----INET--E 206 (424)
T ss_dssp HHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHH---HTTSCEEECCCHHHHCCBGG-----GTBC--S
T ss_pred HHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHH---HhcCCeEeecCCcccccCCc-----cccc--c
Confidence 5667766 3489999999999987643211111122233333333 34689999999999852110 0000 0
Q ss_pred hhHHHHHHHHHhccCChhHHhhhhcCceEEEeecCCeEEEEEcCccc
Q psy15259 207 SWVYESFIQYWGWSLPESARQTFLKGGYYSFLTEKNLRIIVLNTNVY 253 (257)
Q Consensus 207 ~w~~~~l~~~w~~wl~~~~~~~~~~~GyYs~~~~~glriIsLNtn~~ 253 (257)
. |......| .++.... ......||++... +++||+|||...
T Consensus 207 ~--~~~~~~~f--~~P~~~~-~~~~~~~ys~~~g-~~~~i~Ldt~~~ 247 (424)
T 2qfp_A 207 P--FKPFSYRY--HVPYEAS-QSTSPFWYSIKRA-SAHIIVLSSYSA 247 (424)
T ss_dssp T--THHHHHHC--CCCGGGG-TCSSTTSEEEEET-TEEEEECCTTSC
T ss_pred c--chhhhhhc--cCCcccc-CCCCCcEEEEEEC-CEEEEEecCCcc
Confidence 1 11122222 2443211 1223468998865 899999999753
No 16
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=98.75 E-value=7.4e-08 Score=89.67 Aligned_cols=111 Identities=18% Similarity=0.196 Sum_probs=60.2
Q ss_pred HHHHHHHh-cCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCCCCCCCCCCCCCCCC
Q psy15259 127 SALEQIKK-HKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHPVNVFSPYFVQGPTS 205 (257)
Q Consensus 127 s~l~~i~~-~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P~n~f~~~~~~~~~~ 205 (257)
.++++|.+ ..++||||++||++..+......+...... .+.++.....+|+|+++||||....... .. .
T Consensus 143 ~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~---~~~l~~l~~~~P~~~v~GNHD~~~~~~~--~~---~-- 212 (426)
T 1xzw_A 143 TTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTW---GRFSERSVAYQPWIWTAGNHEIDYAPDI--GE---Y-- 212 (426)
T ss_dssp HHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHH---HHHHHHHHTTSCEECCCCGGGCCCBGGG--TB---C--
T ss_pred HHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHH---HHHHHHHHhcCCEEEeccccccccCCcc--cc---c--
Confidence 35666766 348999999999997543211001111222 2333333347899999999998532110 00 0
Q ss_pred hhhHHHHHHHHHhccCChhHHhhhhcCceEEEeecCCeEEEEEcCccc
Q psy15259 206 TSWVYESFIQYWGWSLPESARQTFLKGGYYSFLTEKNLRIIVLNTNVY 253 (257)
Q Consensus 206 ~~w~~~~l~~~w~~wl~~~~~~~~~~~GyYs~~~~~glriIsLNtn~~ 253 (257)
.. +......|. ++.... ......||++.. .+++||+|||...
T Consensus 213 ~~--~~~~~~~f~--~p~~~~-~~~~~~~ys~~~-g~~~~i~Ldt~~~ 254 (426)
T 1xzw_A 213 QP--FVPFTNRYP--TPHEAS-GSGDPLWYAIKR-ASAHIIVLSSYSG 254 (426)
T ss_dssp ST--THHHHHHSC--CCCGGG-TCSSTTSEEEEE-TTEEEEECCTTSC
T ss_pred cC--ChhheEEEe--CCcccC-CCCCCCeEEEEE-CCEEEEEeeCccc
Confidence 01 122222231 332211 112346888875 5699999999753
No 17
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.54 E-value=5.7e-08 Score=80.92 Aligned_cols=56 Identities=21% Similarity=0.299 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHh-cCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 123 DVIRSALEQIKK-HKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 123 ~l~~s~l~~i~~-~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
.+++.+++.+++ ..++|+|+++||++... .+ . ..+.+.|++ ++ .|++.++||||..
T Consensus 28 ~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~-~~--~-------~~~~~~l~~-l~-~~~~~v~GNhD~~ 84 (195)
T 1xm7_A 28 GFEIVILTNLLKVLKPEDTLYHLGDFTWHF-ND--K-------NEYLRIWKA-LP-GRKILVMGNHDKD 84 (195)
T ss_dssp THHHHHHHHHHTTCCTTCEEEECSCCBSCS-CC--T-------TSHHHHHHH-SS-SEEEEECCTTCCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCCCCc-hh--H-------HHHHHHHHH-CC-CCEEEEeCCCCCc
Confidence 466777777776 46899999999999754 11 1 112334443 33 5899999999974
No 18
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=98.44 E-value=1.8e-07 Score=80.33 Aligned_cols=57 Identities=23% Similarity=0.343 Sum_probs=36.8
Q ss_pred HHHHHHHHHH---hc-CCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 124 VIRSALEQIK---KH-KNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 124 l~~s~l~~i~---~~-~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
.++.+++.++ .. .++|+||++||+++.+.. .. +.++.+. .+.+ ..+|+.++||||..
T Consensus 16 ~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~---~~---~~~~~l~-~l~~---~~~~~~v~GNhD~~ 76 (252)
T 1nnw_A 16 ALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY---PK---EVIEVIK-DLTK---KENVKIIRGKYDQI 76 (252)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC---HH---HHHHHHH-HHHH---HSCEEEECCHHHHH
T ss_pred HHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCC---HH---HHHHHHH-hhHh---hcCeeEEecchHHH
Confidence 4667777776 52 279999999999986542 11 1222222 2222 14699999999974
No 19
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.40 E-value=5e-07 Score=75.44 Aligned_cols=50 Identities=30% Similarity=0.489 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
..++.+++.+++ .++|+||++||+++- .+.+.|++ + +.|++.++||||..
T Consensus 39 ~~l~~~l~~~~~-~~~D~ii~~GDl~~~---------------~~~~~l~~-l-~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 39 PNIRKAIEIFND-ENVETVIHCGDFVSL---------------FVIKEFEN-L-NANIIATYGNNDGE 88 (190)
T ss_dssp HHHHHHHHHHHH-SCCSEEEECSCCCST---------------HHHHHGGG-C-SSEEEEECCTTCCC
T ss_pred HHHHHHHHHHhh-cCCCEEEECCCCCCH---------------HHHHHHHh-c-CCCEEEEeCCCcch
Confidence 356777777765 579999999999851 12333443 2 47999999999974
No 20
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=98.40 E-value=8.5e-07 Score=77.99 Aligned_cols=128 Identities=12% Similarity=0.148 Sum_probs=72.1
Q ss_pred CCCCceeEEEecccCCCCCCCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCccEE
Q psy15259 62 ASGDEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKKHKNISMV 141 (257)
Q Consensus 62 ~~~~~~kvlhlSDiH~D~~Y~~g~~a~C~~~~CCr~~~~~~~~~~~~ag~~G~y~~CD~P~~l~~s~l~~i~~~~~~dfi 141 (257)
...+..||++|||||-. ...++.+++.+++ .++|.|
T Consensus 7 ~~~~~~~i~~iSDiHg~-------------------------------------------~~~l~~vl~~~~~-~~~D~i 42 (270)
T 3qfm_A 7 HHMDMTKIALLSDIHGN-------------------------------------------TTALEAVLADARQ-LGVDEY 42 (270)
T ss_dssp ----CEEEEEECCCTTC-------------------------------------------HHHHHHHHHHHHH-TTCCEE
T ss_pred ccccccEEEEEecCCCC-------------------------------------------HHHHHHHHHHHHh-cCCCEE
Confidence 45678999999999942 1457778888876 479999
Q ss_pred EEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCCCCCCCCCCCCC-CCChhhHHHHHHHHHh-c
Q psy15259 142 YMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHPVNVFSPYFVQG-PTSTSWVYESFIQYWG-W 219 (257)
Q Consensus 142 i~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P~n~f~~~~~~~-~~~~~w~~~~l~~~w~-~ 219 (257)
+++||+++.+.+. ..+.+.|++. .|++.+.||||..-.+..... ... .....|.... ..|. .
T Consensus 43 i~~GDlv~~g~~~----------~~~~~~l~~~---~~~~~v~GNhD~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~ 106 (270)
T 3qfm_A 43 WLLGDILMPGTGR----------RRILDLLDQL---PITARVLGNWEDSLWHGVRKE-LDSTRPSQRYLLRQ--CQYVLE 106 (270)
T ss_dssp EECSCCSSSSSCS----------HHHHHHHHTS---CEEEECCCHHHHHHHHHHTTC-SCTTSHHHHHHHHH--HHHHHT
T ss_pred EEcCCCCCCCCCH----------HHHHHHHHcc---CCEEEEcCChHHHHHHhhccc-cCCCcHHHHHHHHH--HHHHHH
Confidence 9999999877531 2334455543 379999999997532211100 000 0011232221 2343 3
Q ss_pred cCChhHHhhhhcCceEEEeecCCeEEEEEc
Q psy15259 220 SLPESARQTFLKGGYYSFLTEKNLRIIVLN 249 (257)
Q Consensus 220 wl~~~~~~~~~~~GyYs~~~~~glriIsLN 249 (257)
-|.++..+.++.--........|+||...-
T Consensus 107 ~L~~~~~~~L~~LP~~~~~~~~g~~i~lvH 136 (270)
T 3qfm_A 107 EISLEEIEVLHNQPLQIHRQFGDLTVGISH 136 (270)
T ss_dssp TSCHHHHHHHHSCCSEEEEEETTEEEEEES
T ss_pred HcCHHHHHHHHhCCCceEEEECCcEEEEEE
Confidence 566666665554333222223567776554
No 21
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.39 E-value=3.5e-07 Score=77.39 Aligned_cols=62 Identities=19% Similarity=0.270 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCccccc-CHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWET-SRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~-s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
..++.+++.+++ .++|+||++||+++...... ..+. ....+.+.|++. +.||+.+.||||..
T Consensus 39 ~~l~~~l~~~~~-~~~d~vi~~GDl~~~g~~~~~~~~~---~~~~~~~~l~~~--~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 39 PATERVLELFAQ-SGAQWLVILGDVLNHGPRNALPEGY---APAKVVERLNEV--AHKVIAVRGNCDSE 101 (208)
T ss_dssp HHHHHHHHHHHH-HTCSEEEECSCCSCCCTTSCCCTTB---CHHHHHHHHHTT--GGGEEECCCTTCCH
T ss_pred HHHHHHHHHHHh-cCCCEEEECCCccccCccccccccc---CHHHHHHHHHhc--CCceEEEECCCchH
Confidence 356777777765 36899999999998754311 1110 012334445542 25899999999973
No 22
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=98.39 E-value=1.1e-06 Score=74.42 Aligned_cols=39 Identities=18% Similarity=0.332 Sum_probs=28.9
Q ss_pred CCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCC
Q psy15259 136 KNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHP 191 (257)
Q Consensus 136 ~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P 191 (257)
.++|+||++||+++ ..+.+.|++. ..||+.++||||...
T Consensus 54 ~~~D~vi~~GDl~~---------------~~~l~~l~~~--~~~v~~V~GNHD~~~ 92 (215)
T 2a22_A 54 DKINYVLCTGNVCS---------------QEYVEMLKNI--TKNVYIVSGDLDSAI 92 (215)
T ss_dssp TTCCEEEECSCCCC---------------HHHHHHHHHH--CSCEEECCCTTCCSC
T ss_pred CCCCEEEECCCCCC---------------HHHHHHHHHc--CCCEEEecCCCcCcc
Confidence 57999999999985 1223445543 368999999999754
No 23
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=98.37 E-value=7e-07 Score=74.22 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=27.9
Q ss_pred CCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 136 KNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 136 ~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
.++|+||++||+++ ..+.+.|++. ..|++.++||||..
T Consensus 39 ~~~d~ii~~GDl~~---------------~~~~~~l~~~--~~~~~~v~GNhD~~ 76 (192)
T 1z2w_A 39 GKIQHILCTGNLCT---------------KESYDYLKTL--AGDVHIVRGDFDEN 76 (192)
T ss_dssp TSCSEEEECSCCBS---------------HHHHHHHHHH--CSEEEECCCTTCCC
T ss_pred CCCCEEEEcCCCCC---------------HHHHHHHHhc--CCCEEEEcCCcCcc
Confidence 47999999999984 1223445543 25899999999974
No 24
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=98.27 E-value=1.8e-06 Score=77.24 Aligned_cols=46 Identities=24% Similarity=0.221 Sum_probs=33.5
Q ss_pred CCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 136 KNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 136 ~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
+++|+||++||+++.+.. +.++.+.+.|++ ++..+++.++||||..
T Consensus 78 ~~~D~vi~aGDl~~~g~~--------~e~~~~~~~L~~-l~~~~v~~V~GNHD~~ 123 (296)
T 3rl5_A 78 PYGDILLHTGDFTELGLP--------SEVKKFNDWLGN-LPYEYKIVIAGNHELT 123 (296)
T ss_dssp CSCSEEEECSCCSSSCCH--------HHHHHHHHHHHT-SCCSEEEECCCTTCGG
T ss_pred CCCCEEEECCcccCCCCH--------HHHHHHHHHHHh-CCCCeEEEEcCCcccc
Confidence 368999999999986642 234455566654 4445799999999974
No 25
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=98.25 E-value=2.5e-07 Score=84.42 Aligned_cols=67 Identities=9% Similarity=0.062 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHP 191 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P 191 (257)
...+.|.+.+++ .++||||+|||++..+........-.+.++.+++.++.. -++|+|+++||||...
T Consensus 21 ~va~~m~~~~~~-~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~-~~~P~~~vlGNHD~~~ 87 (342)
T 3tgh_A 21 LNAKYFKQFIKN-ERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGD-MYMPFFTVLGTRDWTG 87 (342)
T ss_dssp HHHHHHHHHHHH-TTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGT-TCSEEEECCCHHHHTS
T ss_pred HHHHHHHHHHhh-cCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhh-hCCCEEEeCCCCccCC
Confidence 344444444443 689999999999976542211111112222222222112 2689999999999753
No 26
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=98.19 E-value=7.7e-07 Score=76.71 Aligned_cols=54 Identities=24% Similarity=0.423 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCCCC
Q psy15259 124 VIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHPVN 193 (257)
Q Consensus 124 l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P~n 193 (257)
.++.+++.+. ++|.++++||+++.+.. . ..+.+.|++. + .|+.+.||||..-.+
T Consensus 18 ~l~~~l~~~~---~~d~ii~~GDl~~~g~~---~-------~~~~~~l~~~-~--~~~~v~GNhD~~~~~ 71 (246)
T 3rqz_A 18 ALEAVLSDAG---RVDDIWSLGDIVGYGPR---P-------RECVELVRVL-A--PNISVIGNHDWACIG 71 (246)
T ss_dssp HHHHHHHHHC---SCSEEEECSCCSSSSSC---H-------HHHHHHHHHH-C--SSEECCCHHHHHHTC
T ss_pred HHHHHHHhcc---CCCEEEECCCcCCCCCC---H-------HHHHHHHHhc-C--CCEEEeCchHHHHhc
Confidence 4566666664 78999999999986642 1 1233444443 2 379999999985433
No 27
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.11 E-value=5.1e-06 Score=68.59 Aligned_cols=44 Identities=18% Similarity=0.155 Sum_probs=30.5
Q ss_pred HHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 128 ALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 128 ~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
+++.+. .++|+||++||+++- .+.+.|++. ..|++.+.||||..
T Consensus 43 ~l~~~~--~~~D~ii~~GD~~~~---------------~~~~~l~~~--~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 43 EILNSL--KEYDGVIGLGDYVDL---------------DTVILLEKF--SKEFYGVHGNMDYP 86 (178)
T ss_dssp HHHHGG--GGCSEEEESSCBSCH---------------HHHHHHHHH--TSSEEECCCSSSCG
T ss_pred HHHHHh--cCCCEEEECCCCCCH---------------HHHHHHHhc--CCCEEEEECCCCcH
Confidence 344443 378999999999861 233445543 36899999999973
No 28
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=97.89 E-value=1.5e-05 Score=67.37 Aligned_cols=54 Identities=24% Similarity=0.268 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
..++.+++.+...+++|.+|++||+++.+... .+ +.+.++ ..+|+.+.||||..
T Consensus 26 ~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~------~~----~~~~l~----~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 26 TNLMNKLDTIGFDNKKDLLISVGDLVDRGAEN------VE----CLELIT----FPWFRAVRGNHEQM 79 (221)
T ss_dssp HHHHHHHHHHTCCTTTCEEEECSCCSSSSSCH------HH----HHGGGG----STTEEECCCHHHHH
T ss_pred HHHHHHHHHccCCCCCCEEEEeCCccCCCCCh------HH----HHHHHh----cCCEEEEccCcHHH
Confidence 35667777775434789999999999876431 11 222222 25899999999964
No 29
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=97.89 E-value=1.5e-05 Score=65.09 Aligned_cols=44 Identities=11% Similarity=0.180 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 124 VIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 124 l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
.++.+++.+++ ++|+|+++||+.. + .++... . |++.+.||||..
T Consensus 21 ~~~~~~~~~~~--~~d~i~~~GD~~~----~---------------~l~~l~-~-~~~~v~GNhD~~ 64 (176)
T 3ck2_A 21 IVEEVRDRYVG--KVDAVFHNGDSEL----R---------------PDSPLW-E-GIRVVKGNMDFY 64 (176)
T ss_dssp HHHHHHHHHTT--TSSEEEECSCCCS----C---------------TTCGGG-T-TEEECCCTTCCS
T ss_pred HHHHHHHHhhc--CCCEEEECCCCch----H---------------HHHhhh-C-CeEEecCcccch
Confidence 46667777653 7999999999731 0 011112 2 899999999974
No 30
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.76 E-value=2.9e-05 Score=67.87 Aligned_cols=55 Identities=18% Similarity=0.337 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHP 191 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P 191 (257)
..++.+++.+...+..|.+|++||+++.+... .+ +.+.+++ .+|+.+.||||..-
T Consensus 32 ~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~------~~----~l~~l~~----~~~~~v~GNHd~~~ 86 (262)
T 2qjc_A 32 AQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDS------FG----VVRLLKR----LGAYSVLGNHDAKL 86 (262)
T ss_dssp HHHHHHHHHHTCCTTTSEEEECSCCSSSSSCH------HH----HHHHHHH----HTCEECCCHHHHHH
T ss_pred HHHHHHHHHHhccCCCCEEEEecCCCCCCCCH------HH----HHHHHHH----CCCEEEeCcChHHH
Confidence 35677777776532359999999999866421 12 2333333 26999999999743
No 31
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.64 E-value=4.7e-05 Score=67.34 Aligned_cols=55 Identities=27% Similarity=0.463 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 124 VIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 124 l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
.++.+++.+...++.|.+|++||+++.+..+ .+ +.+.+++ ++ .+++.+.||||..
T Consensus 15 ~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s------~~----~l~~l~~-l~-~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 15 ELIALLHKVEFTPGKDTLWLTGDLVARGPGS------LD----VLRYVKS-LG-DSVRLVLGNHDLH 69 (280)
T ss_dssp HHHHHHHHTTCCTTTCEEEECSCCSSSSSCH------HH----HHHHHHH-TG-GGEEECCCHHHHH
T ss_pred HHHHHHHHhCCCCCCCEEEEeCCcCCCCCcc------HH----HHHHHHh-CC-CceEEEECCCcHH
Confidence 4666777665434689999999999876431 12 2333443 23 3799999999964
No 32
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=97.54 E-value=0.00021 Score=68.74 Aligned_cols=60 Identities=22% Similarity=0.300 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 122 LDVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 122 ~~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
...+..+++.+++....+++|.+||++....+.. ...-+.+.+.|.+. +. -+.++||||+
T Consensus 58 ~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~-----~~~g~~~~~~ln~l--g~-d~~~~GNHEf 117 (546)
T 4h2g_A 58 VARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFT-----VYKGAEVAHFMNAL--RY-DAMALGNHEF 117 (546)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHH-----HHTTHHHHHHHHHH--TC-SEEECCGGGG
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCccCCCchhhh-----hhCChHHHHHHHhc--CC-cEEeccCccc
Confidence 3678888888887323479999999998765421 11113445556554 22 3688999997
No 33
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=97.51 E-value=0.00014 Score=70.06 Aligned_cols=59 Identities=10% Similarity=0.065 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhcCCcc-EEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 122 LDVIRSALEQIKKHKNIS-MVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 122 ~~l~~s~l~~i~~~~~~d-fii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
...+...++.+++. .+| +++.+||++....+.. ...-+.+.+.|.+. .+.+.++||||+
T Consensus 59 ~~~~~~~v~~~r~~-~~~~l~l~~GD~~~gs~~~~-----~~~~~~~~~~ln~l---g~d~~~lGNHEf 118 (552)
T 2z1a_A 59 VARRVALFDRVWAR-AKNPLFLDAGDVFQGTLYFN-----QYRGLADRYFMHRL---RYRAMALGNHEF 118 (552)
T ss_dssp HHHHHHHHHHHHHH-SSSEEEEECSCCSSSSHHHH-----HHTTHHHHHHHHHT---TCCEEECCGGGG
T ss_pred HHHHHHHHHHHHhh-CCCEEEEeCCCCCCCcHHHH-----HhCCcHHHHHHHhc---CCCccccccccc
Confidence 36778888888873 456 9999999998654321 11112344555543 234789999997
No 34
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=97.49 E-value=0.0025 Score=60.99 Aligned_cols=123 Identities=16% Similarity=0.192 Sum_probs=62.7
Q ss_pred HHHHHHhcCCccEEEEcCCCCcCccccc-C------H-----H-HHHHHHHHHHH------HHHHHhCCCCEEEecCCCC
Q psy15259 128 ALEQIKKHKNISMVYMTGDLVAHAIWET-S------R-----A-KNIEVMKVVAE------LFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 128 ~l~~i~~~~~~dfii~TGD~v~H~~~~~-s------~-----~-~~~~~~~~~~~------~l~~~~~~~pv~~~lGNHD 188 (257)
++++|.+ .++||||+.||.+--+.... . + + ..+..++..+. .|+.....+|++.+.||||
T Consensus 134 ~~~~ia~-~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE 212 (527)
T 2yeq_A 134 AYKHMAK-EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHE 212 (527)
T ss_dssp HHHHHTT-SCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTT
T ss_pred HHHHHHh-cCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEeccccc
Confidence 4566765 58999999999995432210 0 0 0 01112222221 2333334589999999999
Q ss_pred CCCCCCCCCCCCC-CCCChhhHHHH--HHHHHhccCChhHHh---hhhcCceEEEeecCCeEEEEEcCccc
Q psy15259 189 THPVNVFSPYFVQ-GPTSTSWVYES--FIQYWGWSLPESARQ---TFLKGGYYSFLTEKNLRIIVLNTNVY 253 (257)
Q Consensus 189 ~~P~n~f~~~~~~-~~~~~~w~~~~--l~~~w~~wl~~~~~~---~~~~~GyYs~~~~~glriIsLNtn~~ 253 (257)
+.. | +...... ......|+-.. -...|-.|++..... .-..+-||++...+.++||+|+|..|
T Consensus 213 ~~n-n-~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~y 281 (527)
T 2yeq_A 213 VEN-N-YANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQY 281 (527)
T ss_dssp TST-T-CBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSS
T ss_pred ccC-C-CCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEecccc
Confidence 963 2 3332111 11112333111 112222355432111 01123478888766689999999865
No 35
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=97.45 E-value=0.00092 Score=63.87 Aligned_cols=65 Identities=15% Similarity=0.224 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 122 LDVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 122 ~~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
+..+.++++.+++.....++|.+||++....+..........-+.+.+.|.+. +. -+.++||||+
T Consensus 48 ~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ln~l--g~-D~~t~GNHef 112 (527)
T 3qfk_A 48 LLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRM--AF-DFGTLGNHEF 112 (527)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHHHHT--CC-CEECCCGGGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHHHhc--CC-cEEecccccc
Confidence 46788888988873223478889999976533110000000013445556543 23 3678999996
No 36
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=97.30 E-value=0.0003 Score=67.01 Aligned_cols=58 Identities=22% Similarity=0.271 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhcCCccEEEE-cCCCCcCcccc-cCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 122 LDVIRSALEQIKKHKNISMVYM-TGDLVAHAIWE-TSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 122 ~~l~~s~l~~i~~~~~~dfii~-TGD~v~H~~~~-~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
+..+...++++++ ..++.+++ +||++....+. .++ -+.+.+.|... .+-+.++||||+
T Consensus 37 ~a~la~~i~~~r~-~~~~~llldaGD~~~g~~~~~~~~------g~~~~~~ln~l---g~D~~tlGNHEf 96 (509)
T 3ive_A 37 WANITTLVKQEKA-KNKATWFFDAGDYFTGPYISSLTK------GKAIIDIMNTM---PFDAVTIGNHEF 96 (509)
T ss_dssp HHHHHHHHHHHHH-HCSSEEEEECSCCSSSSHHHHTTT------THHHHHHHTTS---CCSEECCCGGGG
T ss_pred HHHHHHHHHHHHh-cCCCeEEEECCCCCCCchhhhhcC------ChHHHHHHHhc---CCcEEeeccccc
Confidence 4678888888887 35677766 99999865332 111 12234444432 244778999996
No 37
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=97.24 E-value=0.00065 Score=64.61 Aligned_cols=59 Identities=15% Similarity=0.093 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHh-c--CCc-cEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 123 DVIRSALEQIKK-H--KNI-SMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 123 ~l~~s~l~~i~~-~--~~~-dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
..+.++++.+++ . .++ ++++.+||++....+.. ...-+.+.+.|.+. + +.+.++||||+
T Consensus 32 ~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~-----~~~~~~~~~~ln~l--g-~d~~~~GNHEf 94 (516)
T 1hp1_A 32 AAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESD-----LQDAEPDFRGMNLV--G-YDAMAIGNHEF 94 (516)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHH-----TTTTHHHHHHHHHH--T-CCEEECCGGGG
T ss_pred HHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhh-----hcCCcHHHHHHhcc--C-CCEEeeccccc
Confidence 456777887775 2 134 79999999986443211 00112334445543 2 34789999997
No 38
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=97.03 E-value=0.0013 Score=59.60 Aligned_cols=59 Identities=25% Similarity=0.263 Sum_probs=37.0
Q ss_pred HHHHHHHHHHh-c------CCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHH---HhCCCCEEEecCCCCCC
Q psy15259 124 VIRSALEQIKK-H------KNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFRE---YLGDIPVIPIIGNHETH 190 (257)
Q Consensus 124 l~~s~l~~i~~-~------~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~---~~~~~pv~~~lGNHD~~ 190 (257)
.+..+++.+.. . ...|.++++||+++.+..+ .+.+..+.. ++. ..| ..|+.+.||||..
T Consensus 85 ~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s------~evl~~l~~-l~~~~~~~~-~~v~~v~GNHE~~ 153 (342)
T 2z72_A 85 VLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQV------NEVLWFMYQ-LDQQARDAG-GMVHLLMGNHEQM 153 (342)
T ss_dssp HHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCH------HHHHHHHHH-HHHHHHHTT-CEEEECCCHHHHH
T ss_pred HHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCH------HHHHHHHHH-HHHHHhhCC-CeEEEEecCCcHH
Confidence 45566665542 1 1479999999999877542 123333332 221 334 5799999999973
No 39
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=96.97 E-value=0.0019 Score=57.88 Aligned_cols=60 Identities=15% Similarity=0.240 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCCCC
Q psy15259 124 VIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETHPV 192 (257)
Q Consensus 124 l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~P~ 192 (257)
.+..+|+.+.. ...+-++|+||+|+.+..+ .+.+..+.. ++..+| ..|+.+.||||..-.
T Consensus 64 ~L~~ll~~~~~-~~~~~~vflGD~VDRG~~s------~evl~lL~~-lk~~~p-~~v~~lrGNHE~~~l 123 (309)
T 2ie4_C 64 DLMELFRIGGK-SPDTNYLFMGDYVDRGYYS------VETVTLLVA-LKVRYR-ERITILRGNHESRQI 123 (309)
T ss_dssp HHHHHHHHHCC-TTTSCEEECSCCSSSSTTH------HHHHHHHHH-HHHHCT-TTEEECCCTTSSTTG
T ss_pred HHHHHHHHcCC-CCCCEEEEeCCccCCCCCh------HHHHHHHHH-HHhhCC-CcEEEEeCCCCHHHH
Confidence 45566766543 3457789999999987532 233433332 344455 469999999998643
No 40
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.97 E-value=0.002 Score=60.41 Aligned_cols=59 Identities=20% Similarity=0.238 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 124 VIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 124 l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
.+..+|+.+...+.-|-+||.||+|+.+.+. .+.+..+.. ++..+| ..|+.+.||||..
T Consensus 227 ~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s------~e~~~~l~~-l~~~~~-~~~~~lrGNHE~~ 285 (477)
T 1wao_1 227 DLLNIFELNGLPSETNPYIFNGDFVDRGSFS------VEVILTLFG-FKLLYP-DHFHLLRGNHETD 285 (477)
T ss_dssp HHHHHHHHHCCCBTTBCEEEESCCSSSSTTH------HHHHHHHHH-HHHHST-TTEEEECCTTSSH
T ss_pred HHHHHHHHcCCCCCcCeEEEeccccCCCcch------HHHHHHHHH-HHhhCC-CceEeecCCccHH
Confidence 4556676664322346799999999987642 233433332 333455 5799999999953
No 41
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=96.96 E-value=0.0014 Score=63.36 Aligned_cols=63 Identities=10% Similarity=0.020 Sum_probs=39.8
Q ss_pred CCChHHHHHHHHHHHHhc---CCcc-EEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 118 CDMPLDVIRSALEQIKKH---KNIS-MVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 118 CD~P~~l~~s~l~~i~~~---~~~d-fii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
|---...+..+++++++. ..+| +++.+||++....+. ....-+.+.+.|++. +.+++ + ||||+
T Consensus 100 ~~GG~arla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~~-----~~~~g~~~~~~ln~l--g~d~~-~-GNHEf 166 (562)
T 2wdc_A 100 PIGGMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLS-----LLTRGEAVVRWQNLV--GVDHM-V-SHWEW 166 (562)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSHHH-----HHHTTHHHHHHHHHH--TCCEE-C-CSGGG
T ss_pred CcCCHHHHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcchhh-----hhhCCHHHHHHHHhh--CCcEE-e-cchhc
Confidence 555667888899998862 1278 999999999755421 110112344455543 36665 7 99996
No 42
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=96.86 E-value=0.0037 Score=56.15 Aligned_cols=59 Identities=20% Similarity=0.218 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 124 VIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 124 l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
.+..+|+.+...+.-+.++|.||+|+.+.++ .+.+..+. .++..+| -.|+.+.||||..
T Consensus 74 ~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s------~evl~lL~-~lk~~~p-~~v~~lrGNHE~~ 132 (315)
T 3h63_A 74 DLLNIFELNGLPSETNPYIFNGDFVDRGSFS------VEVILTLF-GFKLLYP-DHFHLLRGNHETD 132 (315)
T ss_dssp HHHHHHHHHCCCBTTBCEEEESCCSSSSTTH------HHHHHHHH-HHHHHST-TTEEEECCTTSSH
T ss_pred HHHHHHHHhCCCCCCCEEEEeCCccCCCcCh------HHHHHHHH-HhhhhcC-CcEEEEecCcccc
Confidence 4555666554322345699999999988642 23333333 3344455 4699999999964
No 43
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=96.83 E-value=0.0046 Score=58.47 Aligned_cols=55 Identities=22% Similarity=0.467 Sum_probs=37.8
Q ss_pred CCccEEEEcCCCCcCccccc---------CH---HHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 136 KNISMVYMTGDLVAHAIWET---------SR---AKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 136 ~~~dfii~TGD~v~H~~~~~---------s~---~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
.++..+|+.||+++...... ++ ....+.++.+-+.|.+..+.+||..++||||..
T Consensus 243 s~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~ 309 (476)
T 3e0j_A 243 AHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPT 309 (476)
T ss_dssp TTEEEEEEESCSBCC-------------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSS
T ss_pred hceeEEEEECCccccccccchhhhhhhccccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcc
Confidence 47999999999998752110 00 122345666667777767889999999999964
No 44
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=96.78 E-value=0.0047 Score=55.93 Aligned_cols=59 Identities=19% Similarity=0.231 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 124 VIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 124 l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
.+..+|+.+...+.-+.+||.||+|+.+.++ .+.+..+. .++..+| -.|+.+.||||..
T Consensus 78 ~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s------~evl~lL~-~lk~~~p-~~v~llrGNHE~~ 136 (335)
T 3icf_A 78 DVLNLFRKFGKVGPKHTYLFNGDFVDRGSWS------CEVALLFY-CLKILHP-NNFFLNRGNHESD 136 (335)
T ss_dssp HHHHHHHHHCCCBTTEEEEECSCCSSSSTTH------HHHHHHHH-HHHHHCT-TTEEECCCTTSSH
T ss_pred HHHHHHHHcCCCCCCcEEEEeCCccCCCcCh------HHHHHHHH-HHhhhCC-CcEEEecCchhhh
Confidence 4556777664322335799999999988642 23343333 3344455 4699999999964
No 45
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=96.77 E-value=0.0035 Score=56.66 Aligned_cols=59 Identities=17% Similarity=0.107 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
..+..+|+.+.. ...+-+||.||+|+.+..+ .+.+..+.. ++..+| ..|+.+.||||..
T Consensus 70 ~~L~~ll~~~g~-~~~~~~vflGD~VDRG~~s------~evl~lL~~-lk~~~p-~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 70 YDLLRLFEYGGF-PPESNYLFLGDYVDRGKQS------LETICLLLA-YKIKYP-ENFFLLRGNHECA 128 (330)
T ss_dssp HHHHHHHHHHCS-TTSSCEEECSCCSSSSSCH------HHHHHHHHH-HHHHST-TTEEECCCTTSSH
T ss_pred HHHHHHHHHhCC-CCcceEEeCCCcCCCCCCh------HHHHHHHHH-hhhhcC-CceEEecCCchHh
Confidence 356667776653 3457799999999987642 233433332 333445 4699999999974
No 46
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=96.57 E-value=0.0042 Score=60.10 Aligned_cols=60 Identities=18% Similarity=0.295 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 122 LDVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 122 ~~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
+..+..+++.+++.....++|.+||++....+..-... +.+.+.|.+. +. -+.++||||+
T Consensus 46 ~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g-----~~~~~~ln~l--g~-D~~tlGNHEf 105 (579)
T 3ztv_A 46 FSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGG-----SADAAVMNAG--NF-HYFTLGNHEF 105 (579)
T ss_dssp HHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTT-----HHHHHHHHHH--TC-SEEECCSGGG
T ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCC-----HHHHHHHHhc--Cc-Ceeecccccc
Confidence 46788888988873233599999999987644211000 1234455543 22 3578999996
No 47
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=96.56 E-value=0.0064 Score=54.20 Aligned_cols=59 Identities=17% Similarity=0.100 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
..+..+++.+.. ...+-++|.||+|+.+.+. .+.+..+. .++..+| ..|+.+.||||..
T Consensus 69 ~~L~~ll~~~g~-~~~~~~vfLGD~VDrG~~s------~evl~lL~-~lk~~~p-~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 69 YDLLRLFEYGGF-PPESNYLFLGDYVDRGKQS------LETICLLL-AYKIKYP-ENFFLLRGNHECA 127 (299)
T ss_dssp HHHHHHHHHHCS-TTSSCEEECSCCSSSSSCH------HHHHHHHH-HHHHHST-TTEEECCCTTSSH
T ss_pred HHHHHHHHHhCC-CCCccEEeCCcccCCCCCc------HHHHHHHH-HHHhhCC-CcEEEEecCchhh
Confidence 345667766543 3457799999999988642 23333333 2344455 4699999999974
No 48
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=96.45 E-value=0.01 Score=56.49 Aligned_cols=60 Identities=22% Similarity=0.283 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 122 LDVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 122 ~~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
...+.+.++++++...--++|-.||.+.-..+.. ...-+.+.+.|... + .=..++||||+
T Consensus 36 ~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~-----~~~g~~~i~~mN~l-g--yDa~~lGNHEF 95 (530)
T 4h1s_A 36 VARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFT-----VYKGAEVAHFMNAL-R--YDAMALGNHEF 95 (530)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHH-----HHTTHHHHHHHHHT-T--CCEEECCGGGG
T ss_pred HHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHH-----HhCChHHHHHHhcc-C--CCEEEEchhhh
Confidence 3567788888887222357788999997665421 11112233444432 1 23679999997
No 49
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=96.22 E-value=0.012 Score=53.69 Aligned_cols=58 Identities=17% Similarity=0.186 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 124 VIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 124 l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
.+..+++.... +..+-+++.||+|+.+.+. .+.+..+. .++..+| ..|+.+.||||..
T Consensus 84 dL~~ll~~~g~-~~~~~~vfLGD~VDRG~~s------~Evl~lL~-~lk~~~p-~~v~llrGNHE~~ 141 (357)
T 3ll8_A 84 DLMKLFEVGGS-PANTRYLFLGDYVDRGYFS------IECVLYLW-ALKILYP-KTLFLLRGNHECR 141 (357)
T ss_dssp HHHHHHHHHCC-TTTCCEEECSCCSSSSTTH------HHHHHHHH-HHHHHCT-TTEEECCCTTSSH
T ss_pred HHHHHHHhcCC-CCCcEEEECCCccCCCcCh------HHHHHHHH-HhhhhcC-CcEEEEeCchhhh
Confidence 34456664433 4568899999999988642 23333332 3344455 4599999999974
No 50
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=96.03 E-value=0.014 Score=52.68 Aligned_cols=65 Identities=14% Similarity=0.236 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHH--HHH-----HHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 122 LDVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNI--EVM-----KVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 122 ~~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~--~~~-----~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
+..+.++++++++...-.++|-.||++....+........ +.+ ..+.+.|... +. =+.++||||+
T Consensus 40 ~ar~at~i~~~r~~~~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~g~~~~~~~~ln~l--g~-Da~tlGNHEf 111 (341)
T 3gve_A 40 LARTAQLIQKHREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKTHPIISVMNAL--KY-DAGTLGNHEF 111 (341)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSCCHHHHHHHHT--TC-CBEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEecCccCCCcHHHHHhhhcccccccccccccHHHHHHHhh--CC-Ceeeccchhh
Confidence 4678888888887323357788999997654321000000 000 1244555543 22 2578999997
No 51
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=95.92 E-value=0.0063 Score=58.68 Aligned_cols=92 Identities=17% Similarity=0.182 Sum_probs=48.1
Q ss_pred CCCceeEEEecccCCCCCCCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCcc-EE
Q psy15259 63 SGDEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKKHKNIS-MV 141 (257)
Q Consensus 63 ~~~~~kvlhlSDiH~D~~Y~~g~~a~C~~~~CCr~~~~~~~~~~~~ag~~G~y~~CD~P~~l~~s~l~~i~~~~~~d-fi 141 (257)
...+++|||++|+|--..-.. .+. .-.+.||. ...+...++..++...++ ++
T Consensus 12 ~~~~l~ILhtnD~Hg~~~~~~-~~~-------------------~~~~~~Gg-------~a~l~~~i~~~~~~~~~~~Ll 64 (557)
T 3c9f_A 12 TWNDINFVHTTDTHGWYSGHI-NQP-------------------LYHANWGD-------FISFTTHMRRIAHSRNQDLLL 64 (557)
T ss_dssp CCCSEEEEEECCCTTCTTCCS-SCG-------------------GGCCCHHH-------HHHHHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEEEcccccCccCcc-ccc-------------------ccccccch-------HHHHHHHHHHHHHhcCCCEEE
Confidence 346799999999998532100 000 00112332 234444555544324567 57
Q ss_pred EEcCCCCcCccccc-C-HHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 142 YMTGDLVAHAIWET-S-RAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 142 i~TGD~v~H~~~~~-s-~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
+.+||++....+.. + ... +.+.+.|++. + .-+.++||||+
T Consensus 65 ldaGD~~~Gs~~~~~~~~~g-----~~~~~~ln~l--g-~Da~tlGNHEf 106 (557)
T 3c9f_A 65 IDSGDRHDGNGLSDITSPNG-----LKSTPIFIKQ--D-YDLLTIGNHEL 106 (557)
T ss_dssp EECSCCCSSCHHHHSSSSTT-----TTTHHHHTTS--C-CSEECCCGGGS
T ss_pred EecCCCCCCccchhhcccCC-----HHHHHHHHhc--C-CCEEeecchhc
Confidence 99999996543321 1 000 1223444432 2 33678999997
No 52
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=95.83 E-value=0.025 Score=54.00 Aligned_cols=58 Identities=17% Similarity=0.237 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 124 VIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 124 l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
.+..+|+ +...+..+-+||.||+|+.+.+. .+.+..+.. ++..+| -.|+.+.||||..
T Consensus 97 dL~~LL~-~~g~p~~d~yVFLGDyVDRGp~S------~Evl~lL~a-Lk~~~P-~~v~lLRGNHE~~ 154 (521)
T 1aui_A 97 DLMKLFE-VGGSPANTRYLFLGDYVDRGYFS------IECVLYLWA-LKILYP-KTLFLLRGNHECR 154 (521)
T ss_dssp HHHHHHH-HHCCTTTCCEEECSCCSSSSSCH------HHHHHHHHH-HHHHST-TTEEECCCTTSSH
T ss_pred HHHHHHH-hcCCCCcceEEEcCCcCCCCCCH------HHHHHHHHH-HhhhCC-CeEEEecCCccHH
Confidence 4555666 33234568899999999988642 233333332 343455 4699999999964
No 53
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=95.38 E-value=0.052 Score=48.99 Aligned_cols=32 Identities=22% Similarity=0.216 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhcCCccEEEEcCCCCcCccc
Q psy15259 122 LDVIRSALEQIKKHKNISMVYMTGDLVAHAIW 153 (257)
Q Consensus 122 ~~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~ 153 (257)
+..+.++++++++...-.++|-.||++....+
T Consensus 37 ~ar~at~i~~~r~~~~n~llld~GD~~qGs~~ 68 (339)
T 3jyf_A 37 LVRTASLIEQARAEVKNSVLVDNGDVIQGSPL 68 (339)
T ss_dssp HHHHHHHHHHHHHTCSCEEEEECSCCSSSSHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCCCCCchh
Confidence 46788888998873223488899999975543
No 54
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=92.39 E-value=0.17 Score=44.56 Aligned_cols=56 Identities=21% Similarity=0.298 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
..+...++.+++..++|++|.-||...++..- + ...++.|.+. +.- ..++|||++-
T Consensus 20 ~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~-~--------~~~~~~ln~~--G~D-a~TlGNHefD 75 (281)
T 1t71_A 20 NIIKNNLAQLKSKYQADLVIVNAENTTHGKGL-S--------LKHYEFLKEA--GVN-YITMGNHTWF 75 (281)
T ss_dssp HHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC-C--------HHHHHHHHHH--TCC-EEECCTTTTC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc-C--------HHHHHHHHhc--CCC-EEEEccCccc
Confidence 34666778887622579999999999887421 2 1233444443 233 5678999973
No 55
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=88.35 E-value=0.82 Score=42.94 Aligned_cols=87 Identities=9% Similarity=0.151 Sum_probs=51.0
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHhcCCccEEEEcCCCCcCccc----------------ccCHHHHHHHHHHH-HHH
Q psy15259 108 RATKYGHYDNCDMPLDVIRSALEQIKKHKNISMVYMTGDLVAHAIW----------------ETSRAKNIEVMKVV-AEL 170 (257)
Q Consensus 108 ~ag~~G~y~~CD~P~~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~----------------~~s~~~~~~~~~~~-~~~ 170 (257)
++|+|-.-. +.-+.-+..+++.+++..+||.+|++|.+++-.-. ..|.++. ++.+ ...
T Consensus 153 AsGPyT~sd--nl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~l---F~~~i~~i 227 (460)
T 3flo_A 153 TCGPYFAND--NFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDEL---FLKLFTPI 227 (460)
T ss_dssp EESCCSCSS--CCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHH---HHHHTHHH
T ss_pred EeCCccCCC--ccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHH---HHHHHHHH
Confidence 455554331 23345677788888763379999999999964311 1122222 2222 223
Q ss_pred HHHHhCCCCEEEecCCCCCC-CCCCCCCCC
Q psy15259 171 FREYLGDIPVIPIIGNHETH-PVNVFSPYF 199 (257)
Q Consensus 171 l~~~~~~~pv~~~lGNHD~~-P~n~f~~~~ 199 (257)
+++.-+.+.|+.++|+||.. ....|+...
T Consensus 228 l~~l~~~t~VVlVPS~rD~~~~~~v~PQPp 257 (460)
T 3flo_A 228 LKTISPHIQTVLIPSTKDAISNHAAYPQAS 257 (460)
T ss_dssp HTTSCTTSEEEEECCTTBTTCSCCSBSBCC
T ss_pred HHhccCCCEEEEeCCcccccCCCCCcCCCC
Confidence 33323578899999999985 234555544
No 56
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=74.44 E-value=8.6 Score=33.01 Aligned_cols=53 Identities=21% Similarity=0.315 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
..+...++.+++. . |++|.-|....|+.- .+ ...++.|.+. +.-+. ++|||++
T Consensus 16 ~~v~~~l~~lr~~-~-d~vi~ngen~~~G~g-~~--------~~~~~~l~~~--G~D~~-T~GNHef 68 (252)
T 2z06_A 16 RAVGLHLPDIRDR-Y-DLVIANGENAARGKG-LD--------RRSYRLLREA--GVDLV-SLGNHAW 68 (252)
T ss_dssp HHHHHHHHHHGGG-C-SEEEEECTTTTTTSS-CC--------HHHHHHHHHH--TCCEE-ECCTTTT
T ss_pred HHHHHHHHHHHhh-C-CEEEEeCCCccCCCC-cC--------HHHHHHHHhC--CCCEE-EeccEee
Confidence 4678888888873 4 999999998888753 22 1233444443 45554 8899997
No 57
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=70.22 E-value=12 Score=32.16 Aligned_cols=54 Identities=22% Similarity=0.164 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
+.+...++.+++. . |++|.-|+...++..- +. ..++.|.+. +.- ..++|||++-
T Consensus 16 ~~~~~~l~~lr~~-~-d~vi~nge~~~~G~g~-~~--------~~~~~l~~~--G~D-a~TlGNHefD 69 (255)
T 1t70_A 16 RVLQNHLPTIRPQ-F-DFVIVNMENSAGGFGM-HR--------DAARGALEA--GAG-CLTLGNHAWH 69 (255)
T ss_dssp HHHHHHHHHHGGG-C-SEEEEECTBTTTTSSC-CH--------HHHHHHHHH--TCS-EEECCTTTTS
T ss_pred HHHHHHHHHHHhh-C-CEEEECCCCccCCcCC-CH--------HHHHHHHhC--CCC-EEEecccccc
Confidence 4677788888763 4 9999999999887421 21 234444443 233 4578999973
No 58
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=60.34 E-value=52 Score=25.54 Aligned_cols=58 Identities=12% Similarity=0.232 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEec
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPII 184 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~l 184 (257)
.+++..-+.+.. .++|+|++..-. ++ +..+.++..+.++.+.+.+++..|+.+|+.+.
T Consensus 61 ~~~~~~~~~~~~-~~pd~Vvi~~G~--ND-~~~~~~~~~~~l~~ii~~l~~~~p~~~ii~~~ 118 (200)
T 4h08_A 61 ALIEELAVVLKN-TKFDVIHFNNGL--HG-FDYTEEEYDKSFPKLIKIIRKYAPKAKLIWAN 118 (200)
T ss_dssp HHHHHHHHHHHH-SCCSEEEECCCS--SC-TTSCHHHHHHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHHHHHHHHHhc-CCCCeEEEEeee--CC-CCCCHHHHHHHHHHHHHHHhhhCCCccEEEec
Confidence 344433333333 579999884322 12 23456777778889999999998888877653
No 59
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=36.86 E-value=1e+02 Score=21.86 Aligned_cols=52 Identities=12% Similarity=0.135 Sum_probs=33.3
Q ss_pred HHHHHHHHh-cCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 126 RSALEQIKK-HKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 126 ~s~l~~i~~-~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
+.+++.+.+ ...+|+||.--++.+.+. ..+.+.+++..+++||..+-+..+.
T Consensus 37 ~~a~~~~~~~~~~~dlvi~d~~l~~~~g------------~~~~~~l~~~~~~~~ii~ls~~~~~ 89 (143)
T 3jte_A 37 TEGLRIFTENCNSIDVVITDMKMPKLSG------------MDILREIKKITPHMAVIILTGHGDL 89 (143)
T ss_dssp HHHHHHHHHTTTTCCEEEEESCCSSSCH------------HHHHHHHHHHCTTCEEEEEECTTCH
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCCcH------------HHHHHHHHHhCCCCeEEEEECCCCH
Confidence 445556653 357999998766554221 1344556667788999988876653
No 60
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=36.55 E-value=1.4e+02 Score=23.60 Aligned_cols=45 Identities=11% Similarity=0.010 Sum_probs=31.0
Q ss_pred CCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEe
Q psy15259 136 KNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPI 183 (257)
Q Consensus 136 ~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~ 183 (257)
.++|+|++..-.=+ .. .+.+...+.++.+.+.+++..|+.+|+.+
T Consensus 92 ~~pd~vvi~~G~ND--~~-~~~~~~~~~l~~~i~~l~~~~p~~~ii~~ 136 (232)
T 1es9_A 92 IRPKIVVVWVGTNN--HG-HTAEQVTGGIKAIVQLVNERQPQARVVVL 136 (232)
T ss_dssp CCCSEEEEECCTTC--TT-SCHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCCCEEEEEeecCC--CC-CCHHHHHHHHHHHHHHHHHHCCCCeEEEe
Confidence 37888877542211 11 45666777888999999998888877764
No 61
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=35.76 E-value=1.1e+02 Score=22.28 Aligned_cols=50 Identities=12% Similarity=0.187 Sum_probs=32.9
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||+-=++.+.+. ..+.+.|++..+++||+.+-+..+
T Consensus 48 ~~a~~~l~~-~~~dlvi~D~~l~~~~g------------~~~~~~l~~~~~~~~ii~~s~~~~ 97 (153)
T 3hv2_A 48 TQALQLLAS-REVDLVISAAHLPQMDG------------PTLLARIHQQYPSTTRILLTGDPD 97 (153)
T ss_dssp HHHHHHHHH-SCCSEEEEESCCSSSCH------------HHHHHHHHHHCTTSEEEEECCCCC
T ss_pred HHHHHHHHc-CCCCEEEEeCCCCcCcH------------HHHHHHHHhHCCCCeEEEEECCCC
Confidence 445556665 47999998766654221 134455677778899998887665
No 62
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=34.18 E-value=1.1e+02 Score=21.35 Aligned_cols=50 Identities=16% Similarity=0.074 Sum_probs=29.7
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ .++|.||.-=++.+.+. ..+.+.+++..+.+||+.+-|..+
T Consensus 41 ~~a~~~l~~-~~~dlvi~d~~l~~~~g------------~~~~~~l~~~~~~~~ii~~t~~~~ 90 (130)
T 3eod_A 41 VDALELLGG-FTPDLMICDIAMPRMNG------------LKLLEHIRNRGDQTPVLVISATEN 90 (130)
T ss_dssp HHHHHHHTT-CCCSEEEECCC-----C------------HHHHHHHHHTTCCCCEEEEECCCC
T ss_pred HHHHHHHhc-CCCCEEEEecCCCCCCH------------HHHHHHHHhcCCCCCEEEEEcCCC
Confidence 345566655 47899988655443221 233455666778899998877554
No 63
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=34.17 E-value=95 Score=22.48 Aligned_cols=50 Identities=12% Similarity=0.169 Sum_probs=32.5
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||+--++.+-+. ..+.+.|++..+++||+.+-+..+
T Consensus 56 ~~al~~l~~-~~~dlii~D~~l~~~~g------------~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 56 QEAIQLLEK-ESVDIAILDVEMPVKTG------------LEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HHHHHHHTT-SCCSEEEECSSCSSSCH------------HHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHhhc-cCCCEEEEeCCCCCCcH------------HHHHHHHHHhCCCCeEEEEeCCCC
Confidence 445666665 47999998666543221 234456667778899988877665
No 64
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=33.58 E-value=91 Score=22.00 Aligned_cols=50 Identities=8% Similarity=-0.114 Sum_probs=31.8
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||.--++.+.+. ..+.+.+++..+.+||+.+-+..+
T Consensus 41 ~~a~~~l~~-~~~dlvi~d~~l~~~~g------------~~~~~~l~~~~~~~~ii~~s~~~~ 90 (137)
T 3hdg_A 41 EEGERLFGL-HAPDVIITDIRMPKLGG------------LEMLDRIKAGGAKPYVIVISAFSE 90 (137)
T ss_dssp HHHHHHHHH-HCCSEEEECSSCSSSCH------------HHHHHHHHHTTCCCEEEECCCCCC
T ss_pred HHHHHHHhc-cCCCEEEEeCCCCCCCH------------HHHHHHHHhcCCCCcEEEEecCcC
Confidence 345555655 36899998666554221 234456677778899888777655
No 65
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=33.48 E-value=90 Score=24.37 Aligned_cols=30 Identities=17% Similarity=0.196 Sum_probs=18.1
Q ss_pred CChHHHHHHHHHHHHhcCCccEEEEcCCCCc
Q psy15259 119 DMPLDVIRSALEQIKKHKNISMVYMTGDLVA 149 (257)
Q Consensus 119 D~P~~l~~s~l~~i~~~~~~dfii~TGD~v~ 149 (257)
|-+ ..+.++++...+..+.|+||.||-.-.
T Consensus 55 Dd~-~~i~~~l~~~~~~~~~DlVittGG~g~ 84 (169)
T 1y5e_A 55 DDK-ESIQQAVLAGYHKEDVDVVLTNGGTGI 84 (169)
T ss_dssp SSH-HHHHHHHHHHHTCTTCSEEEEECCCSS
T ss_pred CCH-HHHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 434 344445555443236899999998643
No 66
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=32.20 E-value=97 Score=24.21 Aligned_cols=30 Identities=13% Similarity=0.175 Sum_probs=18.2
Q ss_pred CChHHHHHHHHHHHHhcCCccEEEEcCCCCc
Q psy15259 119 DMPLDVIRSALEQIKKHKNISMVYMTGDLVA 149 (257)
Q Consensus 119 D~P~~l~~s~l~~i~~~~~~dfii~TGD~v~ 149 (257)
|-+..+ ..+++...+..+.|+||.||-+-.
T Consensus 64 Dd~~~i-~~al~~~~a~~~~DlVittGG~g~ 93 (178)
T 3iwt_A 64 DDKIKI-LKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp SCHHHH-HHHHHHHHTCTTCCEEEEESCCSS
T ss_pred CCHHHH-HHHHHHHHhcCCCCEEEecCCccc
Confidence 445444 444443333357899999998643
No 67
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=31.79 E-value=1.2e+02 Score=22.14 Aligned_cols=51 Identities=18% Similarity=0.051 Sum_probs=31.5
Q ss_pred HHHHHHHHh-cCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKK-HKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~-~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ .+.+|+||+--++.+-+. ..+.+.|++..+++||+.+-+..+
T Consensus 71 ~~al~~l~~~~~~~dliilD~~l~~~~g------------~~~~~~lr~~~~~~~ii~ls~~~~ 122 (157)
T 3hzh_A 71 EEAVIKYKNHYPNIDIVTLXITMPKMDG------------ITCLSNIMEFDKNARVIMISALGK 122 (157)
T ss_dssp HHHHHHHHHHGGGCCEEEECSSCSSSCH------------HHHHHHHHHHCTTCCEEEEESCCC
T ss_pred HHHHHHHHhcCCCCCEEEEeccCCCccH------------HHHHHHHHhhCCCCcEEEEeccCc
Confidence 345555655 236899998655543221 234556677778899988776544
No 68
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=31.00 E-value=1.5e+02 Score=21.38 Aligned_cols=50 Identities=12% Similarity=0.092 Sum_probs=32.1
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||.--++.+.+. ..+.+.+++..+++||+.+-+..+
T Consensus 41 ~~a~~~l~~-~~~dlii~D~~l~~~~g------------~~~~~~l~~~~~~~~ii~ls~~~~ 90 (153)
T 3cz5_A 41 GEAYRLYRE-TTPDIVVMDLTLPGPGG------------IEATRHIRQWDGAARILIFTMHQG 90 (153)
T ss_dssp HHHHHHHHT-TCCSEEEECSCCSSSCH------------HHHHHHHHHHCTTCCEEEEESCCS
T ss_pred HHHHHHHhc-CCCCEEEEecCCCCCCH------------HHHHHHHHHhCCCCeEEEEECCCC
Confidence 445566665 46899998655543221 234556677778899988877655
No 69
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=27.61 E-value=1.2e+02 Score=23.87 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=18.3
Q ss_pred CChHHHHHHHHHHHHhcCCccEEEEcCCCCc
Q psy15259 119 DMPLDVIRSALEQIKKHKNISMVYMTGDLVA 149 (257)
Q Consensus 119 D~P~~l~~s~l~~i~~~~~~dfii~TGD~v~ 149 (257)
|-+. .+.++++...+..+.|+||.||-+-.
T Consensus 51 Dd~~-~I~~~l~~~~~~~~~DlVittGG~g~ 80 (178)
T 2pbq_A 51 DERD-LIEKTLIELADEKGCSLILTTGGTGP 80 (178)
T ss_dssp SCHH-HHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred CCHH-HHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 4454 44445555443226899999998643
No 70
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=27.59 E-value=1.2e+02 Score=21.30 Aligned_cols=50 Identities=12% Similarity=0.163 Sum_probs=31.0
Q ss_pred HHHHHHHHhcCCccEEEEcCCCC-----cCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLV-----AHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v-----~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||+--++. +.+. ..+.+.+++..+++||..+-+..+
T Consensus 37 ~~a~~~l~~-~~~dlvi~d~~~~~~~~~~~~g------------~~~~~~l~~~~~~~~ii~ls~~~~ 91 (140)
T 2qr3_A 37 VSLSTVLRE-ENPEVVLLDMNFTSGINNGNEG------------LFWLHEIKRQYRDLPVVLFTAYAD 91 (140)
T ss_dssp HHHHHHHHH-SCEEEEEEETTTTC-----CCH------------HHHHHHHHHHCTTCCEEEEEEGGG
T ss_pred HHHHHHHHc-CCCCEEEEeCCcCCCCCCCccH------------HHHHHHHHhhCcCCCEEEEECCCC
Confidence 445566665 4699999865554 2111 133455666678899998876554
No 71
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=27.32 E-value=1e+02 Score=24.09 Aligned_cols=26 Identities=12% Similarity=0.259 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhcCCccEEEEcCCCCc
Q psy15259 123 DVIRSALEQIKKHKNISMVYMTGDLVA 149 (257)
Q Consensus 123 ~l~~s~l~~i~~~~~~dfii~TGD~v~ 149 (257)
+.+.++++...+ .+.|+||.||-.-.
T Consensus 53 ~~i~~al~~a~~-~~~DlVittGG~s~ 78 (164)
T 3pzy_A 53 SPVGEALRKAID-DDVDVILTSGGTGI 78 (164)
T ss_dssp HHHHHHHHHHHH-TTCSEEEEESCCSS
T ss_pred HHHHHHHHHHHh-CCCCEEEECCCCCC
Confidence 344555554433 36899999998644
No 72
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=26.54 E-value=22 Score=34.84 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=27.6
Q ss_pred CCCChHHHHHHHHHHHH---h---c-CCccEEEEcCCCCcC
Q psy15259 117 NCDMPLDVIRSALEQIK---K---H-KNISMVYMTGDLVAH 150 (257)
Q Consensus 117 ~CD~P~~l~~s~l~~i~---~---~-~~~dfii~TGD~v~H 150 (257)
+=|+|+..++++++++. + . ..--+||+++|...|
T Consensus 215 n~D~PE~g~dAl~qa~~c~~~igWr~~a~rllv~~TDa~~H 255 (690)
T 3fcs_B 215 NRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTH 255 (690)
T ss_dssp CSSSSBCHHHHHHHHHHCHHHHTCCSSSEEEEEEEESSCBC
T ss_pred CCCCCchHHHHHHHHhhcccccCCCCCceEEEEEECCCccc
Confidence 56899999999999983 2 2 245799999999999
No 73
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=26.42 E-value=1.6e+02 Score=20.32 Aligned_cols=51 Identities=12% Similarity=0.184 Sum_probs=32.3
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHH--hCCCCEEEecCCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREY--LGDIPVIPIIGNHET 189 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~--~~~~pv~~~lGNHD~ 189 (257)
+.+++.+.+ ..+|+||.--++.+.+. ..+.+.+++. .+++||+.+-+..+.
T Consensus 37 ~~a~~~l~~-~~~dlii~D~~l~~~~g------------~~~~~~l~~~~~~~~~~ii~~s~~~~~ 89 (127)
T 3i42_A 37 TDALHAMST-RGYDAVFIDLNLPDTSG------------LALVKQLRALPMEKTSKFVAVSGFAKN 89 (127)
T ss_dssp HHHHHHHHH-SCCSEEEEESBCSSSBH------------HHHHHHHHHSCCSSCCEEEEEECC-CT
T ss_pred HHHHHHHHh-cCCCEEEEeCCCCCCCH------------HHHHHHHHhhhccCCCCEEEEECCcch
Confidence 445666665 46999998666554221 2345566666 678999988876664
No 74
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=26.25 E-value=2.4e+02 Score=22.20 Aligned_cols=45 Identities=9% Similarity=0.095 Sum_probs=31.4
Q ss_pred CCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEe
Q psy15259 136 KNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPI 183 (257)
Q Consensus 136 ~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~ 183 (257)
.++|+|++..-.=+- ..+.+...+.+..+.+.+++..|+.+|+.+
T Consensus 93 ~~pd~vvi~~G~ND~---~~~~~~~~~~l~~~i~~l~~~~p~~~iil~ 137 (229)
T 1fxw_F 93 IKPKVIVVWVGTNNH---ENTAEEVAGGIEAIVQLINTRQPQAKIIVL 137 (229)
T ss_dssp CCCSEEEEECCTTCT---TSCHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEEecCCC---CCCHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 368887775422111 245667777888999999998888888764
No 75
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=26.03 E-value=1.5e+02 Score=23.26 Aligned_cols=57 Identities=7% Similarity=0.075 Sum_probs=33.9
Q ss_pred HHHHHHh-cCCccEEEEcC---CCCcCccc----ccCHHHHHHHHHHHHHHHHHHhCCCCEEEec
Q psy15259 128 ALEQIKK-HKNISMVYMTG---DLVAHAIW----ETSRAKNIEVMKVVAELFREYLGDIPVIPII 184 (257)
Q Consensus 128 ~l~~i~~-~~~~dfii~TG---D~v~H~~~----~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~l 184 (257)
+++.+.+ ..++|+|++.. |+...... ..+.+.-...++.+.+.+++..|+.+|+.+.
T Consensus 72 ~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~~~~~f~~~l~~li~~l~~~~P~~~iil~~ 136 (232)
T 3dc7_A 72 MAVRYQAIPEDADFIAVFGGVNDYGRDQPLGQYGDCDMTTFYGALMMLLTGLQTNWPTVPKLFIS 136 (232)
T ss_dssp HHHHGGGSCTTCSEEEEECCHHHHHTTCCCCCTTCCSTTSHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred HHHHHHhcCCCCCEEEEEEeccccccCcCCccccccchHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 3344444 34789887754 43321111 1122333446788889999999999998754
No 76
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=25.57 E-value=1.8e+02 Score=22.64 Aligned_cols=30 Identities=17% Similarity=0.263 Sum_probs=18.3
Q ss_pred CChHHHHHHHHHHHHhcCCccEEEEcCCCCc
Q psy15259 119 DMPLDVIRSALEQIKKHKNISMVYMTGDLVA 149 (257)
Q Consensus 119 D~P~~l~~s~l~~i~~~~~~dfii~TGD~v~ 149 (257)
|-+. .+.++++...+..+.|+||.||-+-.
T Consensus 52 Dd~~-~i~~~l~~a~~~~~~DlVittGG~g~ 81 (172)
T 1mkz_A 52 ENRY-AIRAQVSAWIASDDVQVVLITGGTGL 81 (172)
T ss_dssp SCHH-HHHHHHHHHHHSSSCCEEEEESCCSS
T ss_pred CCHH-HHHHHHHHHHhcCCCCEEEeCCCCCC
Confidence 4443 44445555544225899999998643
No 77
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=25.36 E-value=1.7e+02 Score=21.07 Aligned_cols=52 Identities=19% Similarity=0.149 Sum_probs=32.7
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
+.+++.+.+...+|+||.-=++.+.+. ..+.+.+++..+++||..+-+..|.
T Consensus 37 ~~a~~~l~~~~~~dlvi~D~~l~~~~g------------~~~~~~l~~~~~~~~ii~~s~~~~~ 88 (151)
T 3kcn_A 37 PEALACIKKSDPFSVIMVDMRMPGMEG------------TEVIQKARLISPNSVYLMLTGNQDL 88 (151)
T ss_dssp HHHHHHHHHSCCCSEEEEESCCSSSCH------------HHHHHHHHHHCSSCEEEEEECGGGH
T ss_pred HHHHHHHHcCCCCCEEEEeCCCCCCcH------------HHHHHHHHhcCCCcEEEEEECCCCH
Confidence 445566665323599998766654221 1334556677788999888877663
No 78
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=25.24 E-value=1.4e+02 Score=21.53 Aligned_cols=50 Identities=22% Similarity=0.220 Sum_probs=31.9
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||+--++.+.+. ..+.+.+++..+.+||+.+-+..+
T Consensus 41 ~~a~~~l~~-~~~dlvi~d~~l~~~~g------------~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 41 LDALEALKG-TSVQLVISDMRMPEMGG------------EVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp HHHHHHHTT-SCCSEEEEESSCSSSCH------------HHHHHHHHHHCTTSEEEEEECGGG
T ss_pred HHHHHHHhc-CCCCEEEEecCCCCCCH------------HHHHHHHHHhCCCCcEEEEecCCC
Confidence 445566655 46999998655543221 134556666778899988877665
No 79
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=24.86 E-value=1.5e+02 Score=21.30 Aligned_cols=51 Identities=12% Similarity=0.148 Sum_probs=26.0
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+...+|+||+--++.+.+. ..+.+.+++..+++||+.+-+..+
T Consensus 39 ~~a~~~l~~~~~~dlvi~d~~l~~~~g------------~~~~~~l~~~~~~~~ii~ls~~~~ 89 (154)
T 2qsj_A 39 SDALAFLEADNTVDLILLDVNLPDAEA------------IDGLVRLKRFDPSNAVALISGETD 89 (154)
T ss_dssp HHHHHHHHTTCCCSEEEECC------C------------HHHHHHHHHHCTTSEEEEC-----
T ss_pred HHHHHHHhccCCCCEEEEeCCCCCCch------------HHHHHHHHHhCCCCeEEEEeCCCC
Confidence 445555654247999988655543211 234456666778899988877654
No 80
>2r4f_A 3-hydroxy-3-methylglutaryl-coenzyme A reductase; oxidoreductase, cholesterol, biocynthesis, HMG-COA, NADPH, statin, alternative splicing; HET: RIE; 1.70A {Homo sapiens} PDB: 2q1l_A* 2q6c_A* 2q6b_A* 3bgl_A* 3cct_A* 3ccw_A* 3ccz_A* 3cd0_A* 3cd5_A* 3cd7_A* 3cda_A* 3cdb_A* 1dqa_A* 1dq9_A* 1dq8_A* 1hw8_A* 1hw9_A* 1hwi_A* 1hwj_A* 1hwk_A* ...
Probab=24.81 E-value=65 Score=29.84 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=35.6
Q ss_pred ccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 138 ISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 138 ~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
+.|.+-|||-..+. .+....+.+.+.|++.|++..++.++||--+
T Consensus 211 lrf~~~TgDAMG~N-------Mvn~~~E~v~~~l~~~~~~~~~~sIsgN~~t 255 (441)
T 2r4f_A 211 IRFQSRSGDAMGMN-------MISKGTEKALSKLHEYFPEMQILAVSGNYCT 255 (441)
T ss_dssp EEEEEECTTBCCHH-------HHHHHHHHHHHHHHHHCTTCEEEESCCSCSC
T ss_pred EEEEEecchhhcch-------hHHHHHHHHHHHHHhhCCCCeEEEEecCCcc
Confidence 46788889987654 3445667788888888999999999999876
No 81
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=24.54 E-value=96 Score=26.13 Aligned_cols=48 Identities=15% Similarity=0.203 Sum_probs=31.9
Q ss_pred HHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCCC
Q psy15259 130 EQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHETH 190 (257)
Q Consensus 130 ~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~~ 190 (257)
+.+.+ ...|+|++.|.. ++ +.+ .+..+.+.+++ .++||+.-+||.|.+
T Consensus 30 ~~~~~-~GtDaI~vGgs~---gv---t~~----~~~~~v~~ik~--~~~Piil~p~~~~~~ 77 (235)
T 3w01_A 30 DAICM-SQTDAIMIGGTD---DV---TED----NVIHLMSKIRR--YPLPLVLEISNIESV 77 (235)
T ss_dssp HHHHT-SSCSEEEECCSS---CC---CHH----HHHHHHHHHTT--SCSCEEEECCCSTTC
T ss_pred HHHHH-cCCCEEEECCcC---Cc---CHH----HHHHHHHHhcC--cCCCEEEecCCHHHh
Confidence 33444 468999999932 11 223 34455666776 479999999999764
No 82
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=24.41 E-value=87 Score=21.97 Aligned_cols=49 Identities=14% Similarity=0.123 Sum_probs=29.6
Q ss_pred HHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 128 ALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 128 ~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
+++.+.+ ..||+||.--++.+.+. ..+.+.+++..+++||..+-+..+.
T Consensus 38 a~~~~~~-~~~dlii~d~~l~~~~g------------~~~~~~l~~~~~~~~ii~~s~~~~~ 86 (134)
T 3f6c_A 38 AVQRVET-LKPDIVIIDVDIPGVNG------------IQVLETLRKRQYSGIIIIVSAKNDH 86 (134)
T ss_dssp HHHHHHH-HCCSEEEEETTCSSSCH------------HHHHHHHHHTTCCSEEEEEECC---
T ss_pred HHHHHHh-cCCCEEEEecCCCCCCh------------HHHHHHHHhcCCCCeEEEEeCCCCh
Confidence 4445554 36899988666544221 2345566777788999887776663
No 83
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=23.98 E-value=1.9e+02 Score=20.31 Aligned_cols=49 Identities=14% Similarity=0.219 Sum_probs=30.6
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||.-- +.+ . .-..+.+.+++..+++||+.+-+..+
T Consensus 38 ~~a~~~l~~-~~~dlvi~d~-~~~--------~----~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (142)
T 2qxy_A 38 QEAFTFLRR-EKIDLVFVDV-FEG--------E----ESLNLIRRIREEFPDTKVAVLSAYVD 86 (142)
T ss_dssp HHHHHHHTT-SCCSEEEEEC-TTT--------H----HHHHHHHHHHHHCTTCEEEEEESCCC
T ss_pred HHHHHHHhc-cCCCEEEEeC-CCC--------C----cHHHHHHHHHHHCCCCCEEEEECCCC
Confidence 445556655 4789988854 321 0 11234556677778899998877655
No 84
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=23.85 E-value=1.3e+02 Score=23.28 Aligned_cols=44 Identities=2% Similarity=0.085 Sum_probs=30.8
Q ss_pred CCccEEEEcC---CCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEe
Q psy15259 136 KNISMVYMTG---DLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPI 183 (257)
Q Consensus 136 ~~~dfii~TG---D~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~ 183 (257)
.++|+|++.. |+.. ..+.+...+.+..+.+.+++..|+.+|+.+
T Consensus 84 ~~pd~vvi~~G~ND~~~----~~~~~~~~~~l~~~i~~l~~~~p~~~iil~ 130 (214)
T 2hsj_A 84 GAVDKIFLLIGTNDIGK----DVPVNEALNNLEAIIQSVARDYPLTEIKLL 130 (214)
T ss_dssp SCCCEEEEECCHHHHHT----TCCHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred cCCCEEEEEEecCcCCc----CCCHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 4688887754 4432 234566677888899999998887776654
No 85
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=23.76 E-value=1.6e+02 Score=21.24 Aligned_cols=50 Identities=24% Similarity=0.167 Sum_probs=31.4
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||.-=++.+-+. ..+.+.+++..+.+||+.+-+..+
T Consensus 51 ~~a~~~l~~-~~~dlii~d~~l~~~~g------------~~~~~~l~~~~~~~~ii~~s~~~~ 100 (152)
T 3eul_A 51 AAALELIKA-HLPDVALLDYRMPGMDG------------AQVAAAVRSYELPTRVLLISAHDE 100 (152)
T ss_dssp HHHHHHHHH-HCCSEEEEETTCSSSCH------------HHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHHHh-cCCCEEEEeCCCCCCCH------------HHHHHHHHhcCCCCeEEEEEccCC
Confidence 345556655 36899988655543211 234456677778899988877655
No 86
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=23.38 E-value=1.9e+02 Score=20.22 Aligned_cols=50 Identities=14% Similarity=0.093 Sum_probs=31.2
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHH--HhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFRE--YLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~--~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||.--++.+.+. ..+.+.+++ ..+++||+.+-+..+
T Consensus 44 ~~a~~~l~~-~~~dlii~d~~l~~~~g------------~~~~~~l~~~~~~~~~~ii~~s~~~~ 95 (143)
T 3cnb_A 44 FDAGDLLHT-VKPDVVMLDLMMVGMDG------------FSICHRIKSTPATANIIVIAMTGALT 95 (143)
T ss_dssp HHHHHHHHH-TCCSEEEEETTCTTSCH------------HHHHHHHHTSTTTTTSEEEEEESSCC
T ss_pred HHHHHHHHh-cCCCEEEEecccCCCcH------------HHHHHHHHhCccccCCcEEEEeCCCC
Confidence 345556655 46899998766643221 234455666 467889988777655
No 87
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=22.80 E-value=1.7e+02 Score=20.69 Aligned_cols=50 Identities=14% Similarity=0.173 Sum_probs=31.2
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHH--HhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFRE--YLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~--~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||+--++.+.+. ..+.+.|++ ..+++||+.+-+..+
T Consensus 42 ~~a~~~l~~-~~~dlii~d~~l~~~~g------------~~~~~~l~~~~~~~~~pii~ls~~~~ 93 (147)
T 2zay_A 42 IEAVPVAVK-THPHLIITEANMPKISG------------MDLFNSLKKNPQTASIPVIALSGRAT 93 (147)
T ss_dssp HHHHHHHHH-HCCSEEEEESCCSSSCH------------HHHHHHHHTSTTTTTSCEEEEESSCC
T ss_pred HHHHHHHHc-CCCCEEEEcCCCCCCCH------------HHHHHHHHcCcccCCCCEEEEeCCCC
Confidence 344555555 36899998666543221 134556666 567899998877655
No 88
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=21.99 E-value=2.6e+02 Score=22.19 Aligned_cols=30 Identities=20% Similarity=0.189 Sum_probs=18.6
Q ss_pred CChHHHHHHHHHHHHhcCCccEEEEcCCCCc
Q psy15259 119 DMPLDVIRSALEQIKKHKNISMVYMTGDLVA 149 (257)
Q Consensus 119 D~P~~l~~s~l~~i~~~~~~dfii~TGD~v~ 149 (257)
|-+. .+.++++...+..+.|+||.||-.-.
T Consensus 61 Dd~~-~I~~al~~a~~~~~~DlVIttGGtg~ 90 (189)
T 1jlj_A 61 DEIE-EIKETLIDWCDEKELNLILTTGGTGF 90 (189)
T ss_dssp SCHH-HHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred CCHH-HHHHHHHHHhhcCCCCEEEEcCCCCC
Confidence 4454 44445555443236899999998644
No 89
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=21.88 E-value=2e+02 Score=19.83 Aligned_cols=51 Identities=22% Similarity=0.195 Sum_probs=31.2
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHHH--hCCCCEEEecCCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFREY--LGDIPVIPIIGNHET 189 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~~--~~~~pv~~~lGNHD~ 189 (257)
+.+++.+.+ ..+|+||.--++.+.+. ..+.+.+++. ++++||+.+-+..+.
T Consensus 37 ~~a~~~l~~-~~~dlvi~d~~l~~~~g------------~~~~~~l~~~~~~~~~pii~~s~~~~~ 89 (133)
T 3nhm_A 37 ASGLQQALA-HPPDVLISDVNMDGMDG------------YALCGHFRSEPTLKHIPVIFVSGYAPR 89 (133)
T ss_dssp HHHHHHHHH-SCCSEEEECSSCSSSCH------------HHHHHHHHHSTTTTTCCEEEEESCCC-
T ss_pred HHHHHHHhc-CCCCEEEEeCCCCCCCH------------HHHHHHHHhCCccCCCCEEEEeCCCcH
Confidence 445556665 47999998655543221 1234455654 568999998887654
No 90
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=21.65 E-value=25 Score=34.48 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=27.8
Q ss_pred CCCChHHHHHHHHHHHH---h---cCCccEEEEcCCCCcC
Q psy15259 117 NCDMPLDVIRSALEQIK---K---HKNISMVYMTGDLVAH 150 (257)
Q Consensus 117 ~CD~P~~l~~s~l~~i~---~---~~~~dfii~TGD~v~H 150 (257)
+=|+|+.-++++++++. + ...--+||+++|...|
T Consensus 207 n~D~PE~g~dAl~qa~vc~~~igWr~a~rllV~~TDa~~H 246 (687)
T 3k6s_B 207 NLDAPEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFH 246 (687)
T ss_dssp CSSSSCCHHHHHHHHTTCHHHHCCCSSCCEEEEECSSCCC
T ss_pred CCCCCchHHHHHHHHhhcccccCCccceEEEEEECCCccc
Confidence 56899999999999882 2 2256799999999999
No 91
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=21.55 E-value=1.6e+02 Score=20.67 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=31.6
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHH--HhCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFRE--YLGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~--~~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||.-=++..-+. ..+.+.|++ ..+++||+.+-+..+
T Consensus 40 ~~a~~~l~~-~~~dlvi~d~~l~~~~g------------~~~~~~l~~~~~~~~~~ii~~s~~~~ 91 (140)
T 3grc_A 40 AQALEQVAR-RPYAAMTVDLNLPDQDG------------VSLIRALRRDSRTRDLAIVVVSANAR 91 (140)
T ss_dssp HHHHHHHHH-SCCSEEEECSCCSSSCH------------HHHHHHHHTSGGGTTCEEEEECTTHH
T ss_pred HHHHHHHHh-CCCCEEEEeCCCCCCCH------------HHHHHHHHhCcccCCCCEEEEecCCC
Confidence 455666665 47899988544433211 234455666 567899999888764
No 92
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=20.73 E-value=2.1e+02 Score=19.62 Aligned_cols=52 Identities=23% Similarity=0.201 Sum_probs=31.6
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCc-CcccccCHHHHHHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVA-HAIWETSRAKNIEVMKVVAELFREYLGDIPVIPIIGNHET 189 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~-H~~~~~s~~~~~~~~~~~~~~l~~~~~~~pv~~~lGNHD~ 189 (257)
+.+++.+.+...+|+||.--++.+ .+. ..+.+.+++..+.+||..+-+..+.
T Consensus 39 ~~a~~~l~~~~~~dlvi~d~~l~~~~~g------------~~~~~~l~~~~~~~~ii~~s~~~~~ 91 (132)
T 2rdm_A 39 AKAIEMLKSGAAIDGVVTDIRFCQPPDG------------WQVARVAREIDPNMPIVYISGHAAL 91 (132)
T ss_dssp HHHHHHHHTTCCCCEEEEESCCSSSSCH------------HHHHHHHHHHCTTCCEEEEESSCCT
T ss_pred HHHHHHHHcCCCCCEEEEeeeCCCCCCH------------HHHHHHHHhcCCCCCEEEEeCCccH
Confidence 445556655227999988554432 111 1244556666788999988776654
No 93
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=20.55 E-value=2e+02 Score=20.31 Aligned_cols=84 Identities=13% Similarity=0.174 Sum_probs=43.8
Q ss_pred HHHHHHHHhcCCccEEEEcCCCCcCcccccCHHHHHHHHHHHHHHHHH--HhCCCCEEEecCCCCCCCCC-CC---CCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLVAHAIWETSRAKNIEVMKVVAELFRE--YLGDIPVIPIIGNHETHPVN-VF---SPYF 199 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v~H~~~~~s~~~~~~~~~~~~~~l~~--~~~~~pv~~~lGNHD~~P~n-~f---~~~~ 199 (257)
+.+++.+.+ ..+|+||.-=++.+-+ -..+.+.|++ ..+++||+.+-+..+..-.. .+ +...
T Consensus 41 ~~a~~~l~~-~~~dlii~D~~l~~~~------------g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~ 107 (144)
T 3kht_A 41 AKALYQVQQ-AKYDLIILDIGLPIAN------------GFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSV 107 (144)
T ss_dssp HHHHHHHTT-CCCSEEEECTTCGGGC------------HHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHhhc-CCCCEEEEeCCCCCCC------------HHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEE
Confidence 445556655 4789988854443211 1234456666 56789999888866532100 00 1111
Q ss_pred CCCCC-ChhhHHHHHHHHHhccCC
Q psy15259 200 VQGPT-STSWVYESFIQYWGWSLP 222 (257)
Q Consensus 200 ~~~~~-~~~w~~~~l~~~w~~wl~ 222 (257)
+.... +..-+.+.+..+.+.|.+
T Consensus 108 l~Kp~~~~~~l~~~i~~~l~~~~~ 131 (144)
T 3kht_A 108 VDKSSNNVTDFYGRIYAIFSYWLT 131 (144)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHHHHHHHHh
Confidence 22223 445555666666655544
No 94
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=20.46 E-value=1.6e+02 Score=20.02 Aligned_cols=49 Identities=22% Similarity=0.471 Sum_probs=29.2
Q ss_pred HHHHHHHHhcCCccEEEEcCCCC-cCcccccCHHHHHHHHHHHHHHHHHH--hCCCCEEEecCCCC
Q psy15259 126 RSALEQIKKHKNISMVYMTGDLV-AHAIWETSRAKNIEVMKVVAELFREY--LGDIPVIPIIGNHE 188 (257)
Q Consensus 126 ~s~l~~i~~~~~~dfii~TGD~v-~H~~~~~s~~~~~~~~~~~~~~l~~~--~~~~pv~~~lGNHD 188 (257)
+.+++.+.+ ..+|+||.--++. ..+. ..+.+.+++. .+++||..+ +..+
T Consensus 39 ~~a~~~~~~-~~~dlvi~d~~~~~~~~g------------~~~~~~l~~~~~~~~~~ii~~-~~~~ 90 (127)
T 2gkg_A 39 KGSVEQIRR-DRPDLVVLAVDLSAGQNG------------YLICGKLKKDDDLKNVPIVII-GNPD 90 (127)
T ss_dssp HHHHHHHHH-HCCSEEEEESBCGGGCBH------------HHHHHHHHHSTTTTTSCEEEE-ECGG
T ss_pred HHHHHHHHh-cCCCEEEEeCCCCCCCCH------------HHHHHHHhcCccccCCCEEEE-ecCC
Confidence 344555554 3689998865544 2111 1345566665 578999988 7655
No 95
>2kqs_B Death domain-associated protein 6; SUMO, SIM, DAXX, nucleus, phosphoprotein, UBL conjugation PA apoptosis, transcription, transcription regulation; NMR {Homo sapiens}
Probab=20.32 E-value=59 Score=17.79 Aligned_cols=17 Identities=29% Similarity=0.323 Sum_probs=14.0
Q ss_pred CCCCceeEEEecccCCC
Q psy15259 62 ASGDEISIIQLTDIHYD 78 (257)
Q Consensus 62 ~~~~~~kvlhlSDiH~D 78 (257)
..-.+++|..+||.|..
T Consensus 8 tqcdP~evivlsds~~~ 24 (26)
T 2kqs_B 8 TQCDPEEIIVLSDSDXX 24 (26)
T ss_pred ccCCcceEEEccccccc
Confidence 45678999999999974
Done!