Query psy15260
Match_columns 128
No_of_seqs 129 out of 1116
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 16:27:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15260.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15260hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01383 MYSc_type_VIII Myosin 100.0 1.5E-40 3.3E-45 282.2 7.3 121 1-121 383-507 (677)
2 PTZ00014 myosin-A; Provisional 100.0 2.1E-40 4.6E-45 285.4 7.4 121 1-121 480-607 (821)
3 cd01387 MYSc_type_XV Myosin mo 100.0 2.4E-40 5.1E-45 281.1 7.3 121 1-121 379-505 (677)
4 cd01384 MYSc_type_XI Myosin mo 100.0 2.7E-40 5.8E-45 280.6 7.6 121 1-121 385-511 (674)
5 cd01385 MYSc_type_IX Myosin mo 100.0 3E-40 6.6E-45 281.0 7.4 121 1-121 395-521 (692)
6 cd01381 MYSc_type_VII Myosin m 100.0 4.1E-40 8.9E-45 279.4 7.6 120 1-120 380-506 (671)
7 cd01382 MYSc_type_VI Myosin mo 100.0 3.9E-40 8.4E-45 281.2 7.2 121 1-121 415-551 (717)
8 COG5022 Myosin heavy chain [Cy 100.0 4.8E-40 1.1E-44 288.5 7.2 120 1-120 446-574 (1463)
9 cd01378 MYSc_type_I Myosin mot 100.0 9.9E-40 2.1E-44 277.3 8.4 120 1-120 384-511 (674)
10 cd01379 MYSc_type_III Myosin m 100.0 1E-39 2.2E-44 276.3 8.4 121 1-121 391-516 (653)
11 cd01377 MYSc_type_II Myosin mo 100.0 1.7E-39 3.6E-44 276.6 7.8 121 1-121 392-521 (693)
12 cd01380 MYSc_type_V Myosin mot 100.0 2.5E-39 5.3E-44 275.5 6.8 119 1-120 386-512 (691)
13 smart00242 MYSc Myosin. Large 100.0 5.9E-39 1.3E-43 272.9 7.0 121 1-121 387-514 (677)
14 cd00124 MYSc Myosin motor doma 100.0 1.7E-38 3.7E-43 270.2 7.0 121 1-121 380-507 (679)
15 PF00063 Myosin_head: Myosin h 100.0 1.9E-37 4.2E-42 263.9 5.0 121 1-121 382-514 (689)
16 cd01386 MYSc_type_XVIII Myosin 100.0 6.1E-37 1.3E-41 262.8 7.5 119 1-119 397-544 (767)
17 KOG0164|consensus 100.0 1.2E-35 2.6E-40 247.9 3.8 119 1-119 393-525 (1001)
18 KOG0161|consensus 100.0 8.9E-34 1.9E-38 256.7 4.5 118 1-119 466-593 (1930)
19 KOG0162|consensus 100.0 3.9E-32 8.4E-37 227.5 4.2 120 1-120 401-528 (1106)
20 KOG0160|consensus 100.0 6.4E-32 1.4E-36 231.5 4.2 123 1-124 386-514 (862)
21 KOG0163|consensus 100.0 2E-31 4.3E-36 223.9 5.6 118 1-118 469-602 (1259)
22 KOG4229|consensus 99.9 1.6E-27 3.5E-32 208.3 4.4 119 1-119 445-570 (1062)
23 COG2153 ElaA Predicted acyltra 32.2 20 0.00044 25.7 0.6 29 8-36 117-145 (155)
24 COG4474 Uncharacterized protei 22.6 1.1E+02 0.0024 22.5 3.0 93 16-108 25-140 (180)
No 1
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=100.00 E-value=1.5e-40 Score=282.22 Aligned_cols=121 Identities=39% Similarity=0.585 Sum_probs=111.6
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
||||||||||||||++|++++|..|+++|.+|||.|..|+|.||++|+|||+++|.|||++|||||++|+++|++|++|+
T Consensus 383 fEQLcINyaNEkLQ~~f~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLdee~~~p~~tD~~f~~kl 462 (677)
T cd01383 383 FEQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFEDNQECLDLFEKKPLGLLSLLDEESTFPNATDLTFANKL 462 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHHcCCCCCHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcc---Cccccc-cccceeEEeEEeecccccccHHHHhcccCCCC
Q psy15260 81 YLT---NPAQTT-LLCQYLLSLARYDQNYDIRDRARLLRQLLFPA 121 (128)
Q Consensus 81 ~~~---~~~~~~-~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~ 121 (128)
+.. ||.... ....|+|+||||+|+|++.||++||||.|+.+
T Consensus 463 ~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKNrD~l~~~ 507 (677)
T cd01383 463 KQHLKTNSCFRGERGGAFTVRHYAGEVTYDTTGFLEKNRDLLHSD 507 (677)
T ss_pred HHHhCCCCCCCCCCCCceEEEEeccceeecCCChHHhccccccHH
Confidence 764 443322 34589999999999999999999999998753
No 2
>PTZ00014 myosin-A; Provisional
Probab=100.00 E-value=2.1e-40 Score=285.37 Aligned_cols=121 Identities=27% Similarity=0.336 Sum_probs=111.6
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
||||||||||||||++|++++|..|+++|.+|||.|..++|.||++|+|||+++|.|||+||||||++|+++|++|++|+
T Consensus 480 fEQLcINy~NEkLQq~F~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~idLie~k~~GIl~lLDEec~~p~~tD~~f~~kl 559 (821)
T PTZ00014 480 LEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTEELEYTSNESVIDLLCGKGKSVLSILEDQCLAPGGTDEKFVSSC 559 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCcHHHHHHHhcCCccHHHHHHHHhCCCCCCHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcc---Cccccc----cccceeEEeEEeecccccccHHHHhcccCCCC
Q psy15260 81 YLT---NPAQTT----LLCQYLLSLARYDQNYDIRDRARLLRQLLFPA 121 (128)
Q Consensus 81 ~~~---~~~~~~----~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~ 121 (128)
+.+ ||.... ....|+|+||||+|+|++.+|++||||.|+++
T Consensus 560 ~~~~~~~~~f~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~ 607 (821)
T PTZ00014 560 NTNLKNNPKYKPAKVDSNKNFVIKHTIGDIQYCASGFLFKNKDVLRPE 607 (821)
T ss_pred HHHhcCCCCccCCCCCCCCceEEEEeceeeeeccCcHHHhccccchHH
Confidence 874 443322 24589999999999999999999999998754
No 3
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=100.00 E-value=2.4e-40 Score=281.12 Aligned_cols=121 Identities=36% Similarity=0.505 Sum_probs=111.2
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
||||||||||||||++|++++|..|+++|.+|||.|..++|.||++|+|||+++|.|||++|||||++|+++|++|++|+
T Consensus 379 fEQLcINyaNEkLQ~~f~~~vF~~eq~eY~~EgI~~~~i~f~dN~~~ldLi~~kp~Gil~lLdee~~~p~~td~~~~~kl 458 (677)
T cd01387 379 FEQLCINYANENLQYLFNKIVFQEEQEEYIREQLDWTEIAFADNQPVINLISLKPYGILRILDDQCCFPQATDHTFLQKC 458 (677)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCcCChHHHHHHHhcCCCchHHHHHHHhcCCCCchHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccC---ccccc---cccceeEEeEEeecccccccHHHHhcccCCCC
Q psy15260 81 YLTN---PAQTT---LLCQYLLSLARYDQNYDIRDRARLLRQLLFPA 121 (128)
Q Consensus 81 ~~~~---~~~~~---~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~ 121 (128)
...+ |...+ ....|+|+||||+|+|++.+|++||||.|+++
T Consensus 459 ~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~ 505 (677)
T cd01387 459 HYHHGANPLYSKPKMPLPEFTIKHYAGKVTYQVHKFLDKNHDQVRQD 505 (677)
T ss_pred HHhccCCccccCCCCCCCeeEEEEeCceeeecCCChHHhccchhhHH
Confidence 8753 32221 23479999999999999999999999998754
No 4
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=100.00 E-value=2.7e-40 Score=280.60 Aligned_cols=121 Identities=36% Similarity=0.528 Sum_probs=111.7
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
|||||||||||+||++|++++|..|+++|.+|||.|..++|.||++|+|||+++|.|||++|||||++|+++|++|++|+
T Consensus 385 fEQLcINyaNEkLQ~~f~~~if~~eq~eY~~EgI~~~~i~~~DN~~~ldLie~~~~Gil~lLdee~~~p~~td~~f~~kl 464 (674)
T cd01384 385 FEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKL 464 (674)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccCCChHHHHHHHhcCCccHHHHHHHHHcCCCCCHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcc---Cccccc---cccceeEEeEEeecccccccHHHHhcccCCCC
Q psy15260 81 YLT---NPAQTT---LLCQYLLSLARYDQNYDIRDRARLLRQLLFPA 121 (128)
Q Consensus 81 ~~~---~~~~~~---~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~ 121 (128)
+.. ||...+ ....|+|+||||+|+|++.||++||||.|+++
T Consensus 465 ~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~~ 511 (674)
T cd01384 465 YQTFKDHKRFEKPKLSRTAFTIDHYAGDVTYQTDQFLDKNKDYVVAE 511 (674)
T ss_pred HHHhcCCCCCCCCCCCCCeeEEEEecceeeecCCCHHHhcCCcccHH
Confidence 764 333322 24589999999999999999999999999764
No 5
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=100.00 E-value=3e-40 Score=281.00 Aligned_cols=121 Identities=40% Similarity=0.642 Sum_probs=111.5
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
||||||||||||||++|++++|..|+++|.+|||.|..++|.||++|+|||+++|.|||++|||||++|+++|++|+.|+
T Consensus 395 fEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~f~dN~~~ldLie~k~~Gil~lLdee~~~p~~td~~~l~kl 474 (692)
T cd01385 395 FEQLCINYANEQLQYYFNQHIFKLEQEEYQGEGITWTNIEYTDNVGCIQLFSKKPTGLLYLLDEESNFPHATSQTLLAKF 474 (692)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHhcCCCCCHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccC---cccc---ccccceeEEeEEeecccccccHHHHhcccCCCC
Q psy15260 81 YLTN---PAQT---TLLCQYLLSLARYDQNYDIRDRARLLRQLLFPA 121 (128)
Q Consensus 81 ~~~~---~~~~---~~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~ 121 (128)
...+ +... .....|+|+||||+|+|++.||++||||.|+++
T Consensus 475 ~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~ 521 (692)
T cd01385 475 NQQHKDNKYYEGPQVKEPAFIIQHYAGKVKYQIKDFREKNMDLMRQD 521 (692)
T ss_pred HHHhCCCCCccCCCCCCCeEEEEEecceeeecCCCHHHhccccccHH
Confidence 8754 2211 134579999999999999999999999999754
No 6
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=100.00 E-value=4.1e-40 Score=279.43 Aligned_cols=120 Identities=37% Similarity=0.494 Sum_probs=110.8
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
||||||||||||||++|++++|..|+++|.+|||.|..++|.||++|+|||+++|.|||++|||||++|+++|++|++|+
T Consensus 380 fEQLcINy~NEkLQ~~f~~~vf~~eq~eY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLDee~~~p~~td~~f~~kl 459 (671)
T cd01381 380 FEQLCINFANENLQQFFVQHIFKLEQEEYNLEHINWQHIEFVDNQDALDLIAIKPLNIMSLIDEESKFPKGTDQTMLEKL 459 (671)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccCccCcHHHHHHHhcCCCCcceechHhhcCCCCCHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccC---ccccc----cccceeEEeEEeecccccccHHHHhcccCCC
Q psy15260 81 YLTN---PAQTT----LLCQYLLSLARYDQNYDIRDRARLLRQLLFP 120 (128)
Q Consensus 81 ~~~~---~~~~~----~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~ 120 (128)
+..+ +.... ....|+|+||||+|+|++.+|++||||.|++
T Consensus 460 ~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~ 506 (671)
T cd01381 460 HSQHGLHSNYLKPKSTQETQFGINHFAGVVFYDTRGFLEKNRDTFSG 506 (671)
T ss_pred HHHhcCCCCcccCCCCCCCceEEEEecceEeeccCCHHHhccchhhH
Confidence 7753 32221 2458999999999999999999999999875
No 7
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=100.00 E-value=3.9e-40 Score=281.19 Aligned_cols=121 Identities=28% Similarity=0.452 Sum_probs=110.3
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
||||||||||||||++|++++|..|+++|++|||.|..+.|.||++|+|||+++|.|||++|||||++|+++|++|++|+
T Consensus 415 fEQLcINyaNEkLQ~~f~~~if~~Eq~~Y~~EgI~~~~i~~~DN~~~ldLie~k~~Gil~lLDee~~~p~~tD~~f~~kl 494 (717)
T cd01382 415 FEQFCINYCNEKLQQFFNERILKEEQELYQREGLGVNEVHYVDNQDCIDLIEAKLNGILDILDEENRLPQPSDQHFTSVV 494 (717)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccHHHHHHHhcCCccHHHHhHHHhcCCCCCHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCccc---cc-------------cccceeEEeEEeecccccccHHHHhcccCCCC
Q psy15260 81 YLTNPAQ---TT-------------LLCQYLLSLARYDQNYDIRDRARLLRQLLFPA 121 (128)
Q Consensus 81 ~~~~~~~---~~-------------~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~ 121 (128)
+..+... .. ....|+|+||||+|+|++.+|++||||.|+.+
T Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKNkD~l~~~ 551 (717)
T cd01382 495 HQKHKDHFRLTIPRKSKLAVHRNLRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS 551 (717)
T ss_pred HHHhcCCcCccCCCccccccccccCCCCCEEEEecceeEeecCCChHHhcCccccHH
Confidence 8653211 10 12479999999999999999999999999763
No 8
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=100.00 E-value=4.8e-40 Score=288.52 Aligned_cols=120 Identities=38% Similarity=0.627 Sum_probs=109.5
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhc-CCCcccccchhhhhccCCCchhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDDQAKSLGPLRAYTRVK 79 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~-~p~Gll~lLDee~~~p~~td~~f~~k 79 (128)
|||||||||||||||+|++++|+.||++|.+|||.|.+|+|.||++|+|||++ .|.|||++|||||..|.++|++|..|
T Consensus 446 FEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sK 525 (1463)
T COG5022 446 FEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSK 525 (1463)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHH
Confidence 79999999999999999999999999999999999999999999999999997 47899999999999999999999999
Q ss_pred hhcc-----Ccccc--cc-ccceeEEeEEeecccccccHHHHhcccCCC
Q psy15260 80 LYLT-----NPAQT--TL-LCQYLLSLARYDQNYDIRDRARLLRQLLFP 120 (128)
Q Consensus 80 l~~~-----~~~~~--~~-~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~ 120 (128)
|.+. ++... .+ ...|+|+||||+|+|++.||++||||.|+.
T Consensus 526 L~~~l~~~~~~~f~~~rf~~~~FvvkHYAgDVeY~veg~ldKNkD~l~~ 574 (1463)
T COG5022 526 LAQRLNKNSNPKFKKSRFRDNKFVVKHYAGDVEYDVEGFLDKNKDPLND 574 (1463)
T ss_pred HHHHhccccCccccccccCCCceEEEeecccceeeccchhhhCcchhhH
Confidence 9774 23322 12 448999999999999999999999998864
No 9
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=100.00 E-value=9.9e-40 Score=277.29 Aligned_cols=120 Identities=33% Similarity=0.521 Sum_probs=110.9
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhc-CCCcccccchhhhhcc-CCCchhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDDQAKSL-GPLRAYTRV 78 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~-~p~Gll~lLDee~~~p-~~td~~f~~ 78 (128)
||||||||||||||++|++++|..|+++|.+|||.|..++|.||++|+|||++ +|.|||++|||||++| +++|++|++
T Consensus 384 fEQLcINyaNEkLQ~~f~~~~F~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~~~~~Gil~lLdee~~~p~~~tD~~~~~ 463 (674)
T cd01378 384 FEQFCINYVNEKLQQIFIELTLKAEQEEYVREGIKWTPIEYFNNKIVCDLIEGKRPPGIFSILDDVCATPHEGTDQTFLE 463 (674)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCcCChHHHHHHHhcCCCcchHHHHHHHHcCCCCCChHHHHH
Confidence 79999999999999999999999999999999999999999999999999999 8999999999999999 999999999
Q ss_pred hhhccC---cc---ccccccceeEEeEEeecccccccHHHHhcccCCC
Q psy15260 79 KLYLTN---PA---QTTLLCQYLLSLARYDQNYDIRDRARLLRQLLFP 120 (128)
Q Consensus 79 kl~~~~---~~---~~~~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~ 120 (128)
|++..+ |. .......|+|+||||+|+|++.||++||||.|+.
T Consensus 464 kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNrD~l~~ 511 (674)
T cd01378 464 KLNKKFSSHPHSDHFSSGSDEFRIKHYAGDVTYSVEGFCDKNKDTLFK 511 (674)
T ss_pred HHHHHhccCCCCCCCCCCCCcEEEEEeceeeeecCcCHHHhhcchhhH
Confidence 998753 32 1123558999999999999999999999999875
No 10
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=100.00 E-value=1e-39 Score=276.29 Aligned_cols=121 Identities=33% Similarity=0.469 Sum_probs=111.1
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
||||||||||||||++|++++|..|+++|.+|||+|..++|.||++|+|||+++|.|||++|||||++|+++|++|++|+
T Consensus 391 fEQLcINyaNEkLQ~~f~~~vf~~Eq~eY~~EgI~~~~i~~~dN~~~ldli~~kp~Gil~lLdee~~~~~~td~~~~~kl 470 (653)
T cd01379 391 FEQLCINIANEQIQYYFNQHIFAWEQQEYLNEGVDARLVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQTLVEKF 470 (653)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHhHccCCCcHHHHHHHHhcCCCCCHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCcccc-----ccccceeEEeEEeecccccccHHHHhcccCCCC
Q psy15260 81 YLTNPAQT-----TLLCQYLLSLARYDQNYDIRDRARLLRQLLFPA 121 (128)
Q Consensus 81 ~~~~~~~~-----~~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~ 121 (128)
+.++.... .....|+|+||||+|+|++.+|++||||.|+.+
T Consensus 471 ~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~ 516 (653)
T cd01379 471 EDNLKSKFFWRPKRVELSFGIHHYAGKVLYNASGFLEKNRDFLPAD 516 (653)
T ss_pred HHhcCCCCccCCCCCCCceEEEEeceeEeecCCCHHHhccccccHH
Confidence 87643211 124579999999999999999999999998753
No 11
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=100.00 E-value=1.7e-39 Score=276.60 Aligned_cols=121 Identities=35% Similarity=0.540 Sum_probs=110.7
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCcccccc-CChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVK 79 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~k 79 (128)
|||||||||||+||++|++++|..|+++|.+|||.|..++| .||++|++||+++|.|||++|||||++|+++|++|++|
T Consensus 392 fEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~~~~dn~~~ldLie~~~~Gil~lLdee~~~~~~tD~~~~~k 471 (693)
T cd01377 392 FEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGLDLQPTIDLIEKNPMGILSLLDEECVFPKATDKTFVEK 471 (693)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCCcHHHHHHHhcCCCchHhhhhHHhcCCCCCHHHHHHH
Confidence 79999999999999999999999999999999999999999 59999999999999999999999999999999999999
Q ss_pred hhccC---ccc-----cccccceeEEeEEeecccccccHHHHhcccCCCC
Q psy15260 80 LYLTN---PAQ-----TTLLCQYLLSLARYDQNYDIRDRARLLRQLLFPA 121 (128)
Q Consensus 80 l~~~~---~~~-----~~~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~ 121 (128)
++..+ +.. ......|+|+||||+|+|++.+|++||||.|+++
T Consensus 472 l~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~ 521 (693)
T cd01377 472 LYDNHLGKSKFKKPKKGKAKAHFSLVHYAGTVDYNIDGWLEKNKDPLNDN 521 (693)
T ss_pred HHHHhcCCCcccccCCCCCCCcEEEEeeceeEeeccccHHHhccccccHH
Confidence 98753 221 1224589999999999999999999999999863
No 12
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=100.00 E-value=2.5e-39 Score=275.48 Aligned_cols=119 Identities=39% Similarity=0.591 Sum_probs=109.0
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
|||||||||||+||++|++++|..|+++|.+|||.|+.++|.||++|+|||++ |.|||++|||||++|+++|++|++|+
T Consensus 386 fEQLcINyaNEkLQ~~f~~~iF~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~-~~Gil~lLdee~~~p~~td~~f~~kl 464 (691)
T cd01380 386 FEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGIEWTFIDFYDNQPCIDLIES-KLGILSLLDEECRLPKGSDESWAQKL 464 (691)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCHHHHHHHhC-CCchHHHhHHhhcCCCCChHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999997 68999999999999999999999999
Q ss_pred hccCc-----cccc---cccceeEEeEEeecccccccHHHHhcccCCC
Q psy15260 81 YLTNP-----AQTT---LLCQYLLSLARYDQNYDIRDRARLLRQLLFP 120 (128)
Q Consensus 81 ~~~~~-----~~~~---~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~ 120 (128)
+..+. ...+ ....|+|+||||+|+|++.||++||||.|+.
T Consensus 465 ~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKNrD~l~~ 512 (691)
T cd01380 465 YNKLPKKKNPHFEKPRFGQTSFTVKHFADDVEYDVDGFLEKNRDTVSD 512 (691)
T ss_pred HHHhcccCCCCccCCCCCCCeeEEEEccCCcccccccHHHhccccccH
Confidence 87543 2211 2458999999999999999999999999864
No 13
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=100.00 E-value=5.9e-39 Score=272.87 Aligned_cols=121 Identities=41% Similarity=0.683 Sum_probs=111.7
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
||||||||||||||++|++++|..++++|.+|||.|+.+.|.||++|++||+++|.|||++|||||++|+++|++|++|+
T Consensus 387 fEQLcINyaNEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dN~~~l~li~~~~~Gil~lLdee~~~~~~td~~~~~kl 466 (677)
T smart00242 387 FEQLCINYANEKLQQFFNQHVFKLEQEEYEREGIDWTFIDFFDNQDCIDLIEKKPPGILSLLDEECRFPKATDQTFLEKL 466 (677)
T ss_pred HHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHcCCccHHHHHHHHhcCCCCCHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccC---ccccc----cccceeEEeEEeecccccccHHHHhcccCCCC
Q psy15260 81 YLTN---PAQTT----LLCQYLLSLARYDQNYDIRDRARLLRQLLFPA 121 (128)
Q Consensus 81 ~~~~---~~~~~----~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~ 121 (128)
...+ +...+ ....|+|+||||+|+|++.+|++||||.|+++
T Consensus 467 ~~~~~~~~~~~~~~~~~~~~F~I~H~AG~V~Y~~~gfleKN~D~l~~~ 514 (677)
T smart00242 467 NQTHEKHPHFSKPRKKGRTEFIIKHYAGDVTYDVTGFLEKNKDTLFKD 514 (677)
T ss_pred HHHhcCCCCccCCCCCCCCeEEEEecceeEeecCccHHHHccchhhHH
Confidence 8753 32222 35579999999999999999999999999764
No 14
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=100.00 E-value=1.7e-38 Score=270.17 Aligned_cols=121 Identities=40% Similarity=0.624 Sum_probs=111.6
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
|||||||||||+||++|++++|..++++|.+|||.|..+.|.||++|+|||+++|.|||++|||||++|+++|++|++|+
T Consensus 380 fEQLcINy~NEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dn~~~ldli~~~~~Gi~~lLdee~~~~~~~d~~~~~kl 459 (679)
T cd00124 380 FEQLCINYANEKLQQFFNQHVFKLEQEEYQEEGIDWESIDFTDNQEVIDLIEKKPGGLLSLLDEECLFPKGTDETFLEKL 459 (679)
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHhcCCCccCCcCCCCHHHHHHHhcCCCcHHHHHHHHhCCCCCCHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCccc-------cccccceeEEeEEeecccccccHHHHhcccCCCC
Q psy15260 81 YLTNPAQ-------TTLLCQYLLSLARYDQNYDIRDRARLLRQLLFPA 121 (128)
Q Consensus 81 ~~~~~~~-------~~~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~ 121 (128)
...+... ......|+|+||||+|+|++.+|++||||.|+++
T Consensus 460 ~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~~ 507 (679)
T cd00124 460 NNKLKSNNAFYPAKKNAPTEFTIKHYAGDVTYDARGFLEKNKDVLSPE 507 (679)
T ss_pred HHHhcCCcccccCCCCCCCceEEEeeceeEEecCCCHHHhcCCcccHH
Confidence 8754322 1235589999999999999999999999998753
No 15
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=100.00 E-value=1.9e-37 Score=263.92 Aligned_cols=121 Identities=41% Similarity=0.648 Sum_probs=106.7
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCcccccc-CChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVK 79 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~k 79 (128)
||||||||||||||++|++++|..++++|++|||.|+.++| .||.+|+|||+++|.|||++|||||+.|+++|++|++|
T Consensus 382 fEQLciNyanErLq~~f~~~~f~~e~~~y~~EgI~~~~i~~~~dn~~~ldLi~~~~~Gil~lLdee~~~~~~sd~~fl~k 461 (689)
T PF00063_consen 382 FEQLCINYANERLQQFFNQHIFKSEQEEYKEEGIDWPFIDFNPDNQPCLDLIEKKPKGILSLLDEECLLPRGSDESFLEK 461 (689)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCS-GCGHHHHHHHHHHSSTTSHHHHHHHHCTSTTS-HHHHHHH
T ss_pred cccceeeeccccccceeeeecccccccccccccccccccccccCchhhhhhhccccCCHHHHhhhhhhcccchhhHHHHH
Confidence 69999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhccC----cccc-------ccccceeEEeEEeecccccccHHHHhcccCCCC
Q psy15260 80 LYLTN----PAQT-------TLLCQYLLSLARYDQNYDIRDRARLLRQLLFPA 121 (128)
Q Consensus 80 l~~~~----~~~~-------~~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~ 121 (128)
+...+ +... .....|+|+||+|+|+|++.+|++||||.|+++
T Consensus 462 l~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKNrD~l~~~ 514 (689)
T PF00063_consen 462 LLKRHSGKHPSFVKPRFSRSTSKSSFTIKHYAGDVTYDVEGFLEKNRDPLSQD 514 (689)
T ss_dssp HHHHHTTTSTTEECTSSSTSSTTSCEEEEETTEEEEEE-TTHHHHHHE-S-HH
T ss_pred HHhhcccCCCcccccccccccCCCceEeecccCcceeccccccccccchHHHH
Confidence 87654 3321 245689999999999999999999999998853
No 16
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=100.00 E-value=6.1e-37 Score=262.77 Aligned_cols=119 Identities=27% Similarity=0.346 Sum_probs=104.9
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCcccccc-CChHHHHHHHhcCC--------------Ccccccchhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKP--------------NGLLCVLDDQ 65 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~p--------------~Gll~lLDee 65 (128)
||||||||||||||++|++++|..|+++|.+|||+|+.+.+ .||.+|++||+++| .|||++||||
T Consensus 397 fEQLcINyaNEkLQq~f~~~vF~~Eq~eY~~EGI~~~~~~~~~dn~~~i~lid~~p~~~~~~~~~~~~~~~GIl~lLDEe 476 (767)
T cd01386 397 FEELCHNYLQERLQLLFHHRTFVQPLERYAEEGVEVEFDLAEPSPGTTVALVDQAPQQVVVPAGLRAEDARGLLWLLDEE 476 (767)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCchhhHHHhhcccccccccchhhccCCCchhhhhhHh
Confidence 79999999999999999999999999999999999986555 79999999999865 5999999999
Q ss_pred hhccCCCchhhhhhhhccC---ccccc---------cccceeEEeEEee--cccccccHHHHhcccCC
Q psy15260 66 AKSLGPLRAYTRVKLYLTN---PAQTT---------LLCQYLLSLARYD--QNYDIRDRARLLRQLLF 119 (128)
Q Consensus 66 ~~~p~~td~~f~~kl~~~~---~~~~~---------~~~~f~i~H~~g~--V~Y~~~~f~~kN~D~l~ 119 (128)
|++|++||++|++|++..+ +...+ ....|+|+||||+ |+|++.+|++||||.+.
T Consensus 477 c~~p~~tD~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~~~V~Y~~~gfleKNkD~~~ 544 (767)
T cd01386 477 ALVPGSSDDTFLERLFAAYGDRETRETGLSRLRTCEGPLQFVLFHLLGTNPVLYDVTGWLRRAKPNPA 544 (767)
T ss_pred hcCCCCcHHHHHHHHHHHhccCCCcccCccccccCCCCCcEEEEEcCCCCceEecCCCHHHhcCCCCC
Confidence 9999999999999997642 22211 2357999999995 99999999999999653
No 17
>KOG0164|consensus
Probab=100.00 E-value=1.2e-35 Score=247.95 Aligned_cols=119 Identities=35% Similarity=0.576 Sum_probs=108.6
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccC-CCchhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLG-PLRAYTRVK 79 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~-~td~~f~~k 79 (128)
|||||||||||+||+.|++.+++.|||||.+|||.|..|+|.+|..++||++.+-.|||+||||||+.|+ .||.+|+++
T Consensus 393 FEQfcINYCNEKLQQlFIel~LKqEQEEY~rEgI~W~~i~YFnN~iIcdLvE~~~~GIlailDe~Cl~~G~vtD~tfL~~ 472 (1001)
T KOG0164|consen 393 FEQFCINYCNEKLQQLFIELVLKQEQEEYEREGIEWTHIDYFNNKIICDLVEQPHKGILAILDEACLRPGTVTDETFLEK 472 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCCceehhhcCCceeeehhccCccchhhhhhHHhcCCCccchHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999999999999999999996 679999988
Q ss_pred hhc---cCcccccc----------ccceeEEeEEeecccccccHHHHhcccCC
Q psy15260 80 LYL---TNPAQTTL----------LCQYLLSLARYDQNYDIRDRARLLRQLLF 119 (128)
Q Consensus 80 l~~---~~~~~~~~----------~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~ 119 (128)
|.+ +||..+++ ...|-|.||||+|+|++.+|++||+|+|.
T Consensus 473 l~~~~~~H~Hy~sr~~~~~dksl~~~~Fri~HYAG~V~YsV~gFidKN~D~Lf 525 (1001)
T KOG0164|consen 473 LNQKLKKHPHYTSRKLKQTDKSLGFSDFRITHYAGDVTYSVEGFIDKNNDLLF 525 (1001)
T ss_pred HHHHhhhCCcchhhhccccccccCccceeEEEeccceEEEEEeeeccCccHHH
Confidence 865 46554321 24699999999999999999999999984
No 18
>KOG0161|consensus
Probab=99.98 E-value=8.9e-34 Score=256.75 Aligned_cols=118 Identities=35% Similarity=0.555 Sum_probs=108.5
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCcccccc-CChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVK 79 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~k 79 (128)
||||||||+||+||++|++++|..++++|.+|||.|.+|+| .|-++|++||++ |.||+|+|||||++|++||.+|+.|
T Consensus 466 FEQLciNytnEkLQqfFnh~mFvlEqeeY~~EgIew~fidfG~Dlq~~idLIEk-p~Gi~slLdEEc~~PkAtd~tf~~k 544 (1930)
T KOG0161|consen 466 FEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWDFIDFGLDLQPTIDLIEK-PMGILSLLDEECVVPKATDKTFLEK 544 (1930)
T ss_pred HHHHHHHHHHHHHHhhhcchhhhhhHHHHHHhCCceeeeccccchhhhHHHHhc-hhhHHHHHHHHHhcCCCccchHHHH
Confidence 79999999999999999999999999999999999999999 899999999996 7899999999999999999999999
Q ss_pred hhccC----ccccc-----cccceeEEeEEeecccccccHHHHhcccCC
Q psy15260 80 LYLTN----PAQTT-----LLCQYLLSLARYDQNYDIRDRARLLRQLLF 119 (128)
Q Consensus 80 l~~~~----~~~~~-----~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~ 119 (128)
++..+ |...+ ....|.+.||||+|-|++.+|++||+|.|.
T Consensus 545 L~~~~~gk~~~f~~~k~~~~~~~F~l~HyaG~V~Y~~~~WL~Knkdpln 593 (1930)
T KOG0161|consen 545 LCDQHLGKHPKFQKPKGKKAEAHFALVHYAGTVDYNVDGWLEKNKDPLN 593 (1930)
T ss_pred HHHHhhccCccccCcccccchhhhheeeecceeccCccchhhcCCCCch
Confidence 98864 33222 244799999999999999999999999875
No 19
>KOG0162|consensus
Probab=99.97 E-value=3.9e-32 Score=227.48 Aligned_cols=120 Identities=32% Similarity=0.533 Sum_probs=109.8
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhc-CCCcccccchhhhhccCC----Cchh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDDQAKSLGP----LRAY 75 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~-~p~Gll~lLDee~~~p~~----td~~ 75 (128)
||||||||.||+||+.|++.+++.|||+|.+|||.|.+|.|.||+-++|||+. +|.|||++|||.|....+ .|..
T Consensus 401 FEQ~CINfVNEKLQQIFIeLTLKaEQEeYvrE~I~WTpIkYFnNKvVCDLIE~K~PPGims~ldD~~At~Ha~~~~aDqa 480 (1106)
T KOG0162|consen 401 FEQFCINFVNEKLQQIFIELTLKAEQEEYVREGIKWTPIKYFNNKVVCDLIENKRPPGIMSALDDVCATAHADSEGADQA 480 (1106)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccccchhhcCCeeeeehhhccCCchHHHHHHHHHHHhccccchhHHH
Confidence 79999999999999999999999999999999999999999999999999996 588999999999998754 3566
Q ss_pred hhhhhh---ccCccccccccceeEEeEEeecccccccHHHHhcccCCC
Q psy15260 76 TRVKLY---LTNPAQTTLLCQYLLSLARYDQNYDIRDRARLLRQLLFP 120 (128)
Q Consensus 76 f~~kl~---~~~~~~~~~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~ 120 (128)
|+.+|. ..||.....+..|+|+||||+|+||+.+|.+||||.|.+
T Consensus 481 ~~qrLn~~~~s~phF~~~s~~FvIkHYAGdVtYdi~G~~drNrD~L~~ 528 (1106)
T KOG0162|consen 481 LLQRLNKLFGSHPHFESRSNGFVIKHYAGDVTYDIDGFCDRNRDVLFK 528 (1106)
T ss_pred HHHHHHHHhcCCCccccccCceEEEEeccceeeecccccccchhHHHH
Confidence 766654 578998888999999999999999999999999998854
No 20
>KOG0160|consensus
Probab=99.97 E-value=6.4e-32 Score=231.47 Aligned_cols=123 Identities=41% Similarity=0.574 Sum_probs=113.2
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
||||||||+||+||+.|++|+|..++++|..|+|.|..++|.||++|+++|+. |.|++++|||+|++|.+++++|..||
T Consensus 386 feQfcINyanEkLqq~fnqHvfk~Eqeey~~e~i~Ws~ief~dNq~~~~lie~-~~Gi~~Llde~c~lp~~t~~~~a~KL 464 (862)
T KOG0160|consen 386 FEQFCINYANEKLQQQFNQHVFKLEQEEYTKEEIDWSGIEFRDNQECLDLIEK-PLGILALLDEECMLPKGTDETLAQKL 464 (862)
T ss_pred HHHhhhhhHHHHhhHHHHHHHHHHHHHHHHhhccccccccCcCccchhhhhcc-ccchhhccchhccCCCCCcchHHHHH
Confidence 68999999999999999999999999999999999999999999999999997 89999999999999999999999999
Q ss_pred hcc---Ccccccc---ccceeEEeEEeecccccccHHHHhcccCCCCCCC
Q psy15260 81 YLT---NPAQTTL---LCQYLLSLARYDQNYDIRDRARLLRQLLFPAPGA 124 (128)
Q Consensus 81 ~~~---~~~~~~~---~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~~~~~~ 124 (128)
+.. ++..++. ...|.|.||||+|+|++.+|++||||.+++++.+
T Consensus 465 ~~~~~~~~~f~kpr~~~~~f~v~hyAg~v~y~~~~fL~knrd~v~~el~~ 514 (862)
T KOG0160|consen 465 YQTLKRNKRFTKPRLSRTDFRVAHYAGDVTYDTEGFLEKNRDYVSDELID 514 (862)
T ss_pred HHHhccCCccCCCCCCcCCcccccccCccccchhhhccCCccccCHHHHh
Confidence 873 4433332 3469999999999999999999999999998754
No 21
>KOG0163|consensus
Probab=99.97 E-value=2e-31 Score=223.91 Aligned_cols=118 Identities=35% Similarity=0.537 Sum_probs=107.9
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
|||||||||||+||++|+++++..||+.|.+||+.++.|.|.||++|++||+.|..|||.|||||+++|+++++.|..+.
T Consensus 469 FEQFCINyCNEKLQ~FFNerILkeEQElYekEGLnv~ei~f~DNqDcIeL~E~K~~GifdlLDEEaklP~~s~qhFT~~v 548 (1259)
T KOG0163|consen 469 FEQFCINYCNEKLQKFFNERILKEEQELYEKEGLNVPEIEFTDNQDCIELIEAKSNGIFDLLDEEAKLPKPSYQHFTARV 548 (1259)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEeccchhHHHHHHHhccchhhhhhhhccCCCcchHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hccCcccc--------cc--------ccceeEEeEEeecccccccHHHHhcccC
Q psy15260 81 YLTNPAQT--------TL--------LCQYLLSLARYDQNYDIRDRARLLRQLL 118 (128)
Q Consensus 81 ~~~~~~~~--------~~--------~~~f~i~H~~g~V~Y~~~~f~~kN~D~l 118 (128)
+..+..+. +. .-.|.|+||||.|-|.+..|++||.|.|
T Consensus 549 He~~k~HfRL~~PRkSklksHR~lRDdEG~liRHfAGaVCYeT~~FvEKNnD~L 602 (1259)
T KOG0163|consen 549 HESNKNHFRLDLPRKSKLKSHRELRDDEGFLIRHFAGAVCYETEQFVEKNNDAL 602 (1259)
T ss_pred HHhhhcceeecCCchhhhhhhhhhccccceeeeecccceeechHHHHHhccHHH
Confidence 77543221 11 2269999999999999999999999986
No 22
>KOG4229|consensus
Probab=99.94 E-value=1.6e-27 Score=208.29 Aligned_cols=119 Identities=39% Similarity=0.633 Sum_probs=109.9
Q ss_pred CccchhhhhhHHHHHHHHHHHhHhHHHHHhhhCCCccccccCChHHHHHHHhcCCCcccccchhhhhccCCCchhhhhhh
Q psy15260 1 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKSLGPLRAYTRVKL 80 (128)
Q Consensus 1 feqlciN~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLDee~~~p~~td~~f~~kl 80 (128)
|||+|||+|||+||.+|++++|..|+++|..|+|.|..+.|.||..|+++|..+|+|||.+||||+.+|+++|.+.+.|+
T Consensus 445 fEq~~in~Ane~lQ~~fnqhIf~~Eq~ey~~e~I~w~~i~~~dN~~~ldli~~kp~gil~liDees~fP~~td~tl~~k~ 524 (1062)
T KOG4229|consen 445 FEQLCINLANEQLQYYFNQHIFALEQEEYDNESIDWRNIEFADNRRRLDLISPKPMGILSLIDEESRFPKATDQTLLLKL 524 (1062)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhcCCCeeeeeeeeccchhhhhccCccchhheecccCcCCchHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCccc-----cc--cccceeEEeEEeecccccccHHHHhcccCC
Q psy15260 81 YLTNPAQ-----TT--LLCQYLLSLARYDQNYDIRDRARLLRQLLF 119 (128)
Q Consensus 81 ~~~~~~~-----~~--~~~~f~i~H~~g~V~Y~~~~f~~kN~D~l~ 119 (128)
...+... ++ ....|+|.||+|.|.|++.+|++||+|.++
T Consensus 525 ~~q~~~~~~y~~~k~~~e~~f~I~Hyagkv~y~~~~flekNrD~~~ 570 (1062)
T KOG4229|consen 525 NMQHGSNNLYVFPKSRVETVFGITHYAGKVQYNIRGFLEKNRDTVR 570 (1062)
T ss_pred hhhhhcccccccccccccceeeeeeecceehhhhhhHHHhhhhhhh
Confidence 8765421 11 234799999999999999999999999876
No 23
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=32.23 E-value=20 Score=25.73 Aligned_cols=29 Identities=34% Similarity=0.476 Sum_probs=26.2
Q ss_pred hhhHHHHHHHHHHHhHhHHHHHhhhCCCc
Q psy15260 8 YANEHLQYYFNQHVFQYEQEEYNKEGIRW 36 (128)
Q Consensus 8 ~~nE~Lq~~~~~~~f~~e~~~y~~EgI~~ 36 (128)
-|++.||.+|-+.-|..-.++|.+.||+-
T Consensus 117 ~AQahLq~fYa~~GFv~~~e~yledGIpH 145 (155)
T COG2153 117 GAQAHLQDFYASFGFVRVGEEYLEDGIPH 145 (155)
T ss_pred ehHHHHHHHHHHhCcEEcCchhhcCCCCc
Confidence 37889999999999999999999999963
No 24
>COG4474 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.63 E-value=1.1e+02 Score=22.50 Aligned_cols=93 Identities=18% Similarity=0.251 Sum_probs=54.7
Q ss_pred HHHHHHhHhHHHHHhhhCCCcccccc--C-C--hHHHHHHH-hcCC---CcccccchhhhhccCCCchhhhhhhhc----
Q psy15260 16 YFNQHVFQYEQEEYNKEGIRWRHIEF--S-D--NTLCLQLV-EGKP---NGLLCVLDDQAKSLGPLRAYTRVKLYL---- 82 (128)
Q Consensus 16 ~~~~~~f~~e~~~y~~EgI~~~~i~~--~-d--n~~~ldli-~~~p---~Gll~lLDee~~~p~~td~~f~~kl~~---- 82 (128)
.++...+....+.+.+||+.|..+.= . + -..|+-.| ..-| .+++.-..+....-........+++..
T Consensus 25 ~~IKkai~~~l~~lleeGleW~litGqLG~E~WA~Evv~eLk~eyp~ik~avitpFe~q~~~WnE~nq~ky~~~l~~aD~ 104 (180)
T COG4474 25 SYIKKAIKKKLEALLEEGLEWVLITGQLGFELWAAEVVIELKEEYPHIKLAVITPFEEQGKNWNEDNQMKYARILKAADF 104 (180)
T ss_pred HHHHHHHHHHHHHHHhcCceEEEEeccccHHHHHHHHHHHHHhhCCCeeEEEEechhhhccccCchhHHHHHHHHhhhhh
Confidence 46778888889999999999954421 0 1 11222222 2223 244444555555444444333332221
Q ss_pred ---------cCccccccccceeEEeEEeec-ccccc
Q psy15260 83 ---------TNPAQTTLLCQYLLSLARYDQ-NYDIR 108 (128)
Q Consensus 83 ---------~~~~~~~~~~~f~i~H~~g~V-~Y~~~ 108 (128)
.+|.+.....+|.|.|.-|.+ .||..
T Consensus 105 v~~i~~~~YesPaQf~q~nqf~le~sdg~ll~YD~e 140 (180)
T COG4474 105 VKSITERPYESPAQFRQYNQFLLEKSDGALLFYDEE 140 (180)
T ss_pred hhhhccCCccCHHHHHHhhhhhhccCceeEEEEcCc
Confidence 145666667799999999995 89876
Done!