BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15268
(256 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULT8|HECD1_HUMAN E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1
SV=3
Length = 2610
Score = 322 bits (826), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/249 (67%), Positives = 198/249 (79%), Gaps = 3/249 (1%)
Query: 1 MLDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDL 60
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DL
Sbjct: 61 FLDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDL 119
Query: 61 AEQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEP 120
AEQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSAMAVVSRLC KMEP
Sbjct: 120 AEQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEP 179
Query: 121 QDPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIR 180
QD L VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R
Sbjct: 180 QDSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSR 239
Query: 181 LSNAAGSNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSDL 240
++ A G+ +S ST A T A ++K S+ VSTIVSLLS LCRGSP +T DL
Sbjct: 240 MAAAGGTVSGPSSACKPGRSTTGAPSTTA-DSKLSN-QVSTIVSLLSTLCRGSPVVTHDL 297
Query: 241 LHSDLPDAI 249
L S+LPD+I
Sbjct: 298 LRSELPDSI 306
>sp|Q69ZR2|HECD1_MOUSE E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus GN=Hectd1 PE=1
SV=2
Length = 2618
Score = 321 bits (822), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/251 (66%), Positives = 200/251 (79%), Gaps = 7/251 (2%)
Query: 1 MLDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDL 60
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DL
Sbjct: 61 FLDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDL 119
Query: 61 AEQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEP 120
AEQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSAMAVVSRLC KMEP
Sbjct: 120 AEQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEP 179
Query: 121 QDPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIR 180
QD L VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R
Sbjct: 180 QDSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSR 239
Query: 181 LSNAAG--SNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITS 238
++ A G S P + G + + A ++ A ++K S+ VSTIVSLLS LCRGSP +T
Sbjct: 240 MAAAGGTVSGPSSACKPGRSTTGAPSA---AADSKLSN-QVSTIVSLLSTLCRGSPLVTH 295
Query: 239 DLLHSDLPDAI 249
DLL S+LPD+I
Sbjct: 296 DLLRSELPDSI 306
>sp|Q9LYZ7|UPL4_ARATH E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4
PE=1 SV=1
Length = 1502
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ + RA+TY DV +V D + A+C RL + D+AEQC++ L
Sbjct: 169 DIMLLAIRAITYLCDVYPPSVEFLVRHD-TIPALCQRL------LTIEYLDVAEQCLQAL 221
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E I E + AG + +VL FI S+ + A++ V +C ++ + P +
Sbjct: 222 EKISRDEPVACLNAGAIMAVLSFIDFFSTSIQR----VAISTVVNICKQLSSESPSPFMD 277
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASE 176
AV L LL++ED + + C ++D+ + L +HGL +E
Sbjct: 278 AVPILCTLLQYEDRQLVENVAICLTKIADQASESPAMLDQLCRHGLINE 326
>sp|F1RCR6|TRIPC_DANRE E3 ubiquitin-protein ligase TRIP12 OS=Danio rerio GN=trip12 PE=2
SV=1
Length = 2026
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 14/151 (9%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ +RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 536 DIMNHASRALTYMMEALPRSS--AVVVD-AIPVFLEKLQVIQFI------DVAEQALTAL 586
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQL-PE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + +
Sbjct: 587 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 642
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRF 158
++ L+ L H+D ++ CFA L D F
Sbjct: 643 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF 673
>sp|G5E870|TRIPC_MOUSE E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus GN=Trip12 PE=1
SV=1
Length = 2025
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 40/242 (16%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 502 DIMNHACRALTYMMEALPRSS--AVVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 552
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQL-PE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + +
Sbjct: 553 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 608
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRLSNAAGS 187
++ L+ L H+D ++ CFA L D F QH E L++
Sbjct: 609 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF-----------QH---EENLLQ------- 647
Query: 188 NPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSDLLHSDLPD 247
+ ++ T + T SSG +V + S +C P++ L+ ++ +
Sbjct: 648 -----QVASKDLLTNVQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAE 702
Query: 248 AI 249
+
Sbjct: 703 TL 704
>sp|E1B7Q7|TRIPC_BOVIN E3 ubiquitin-protein ligase TRIP12 OS=Bos taurus GN=TRIP12 PE=2
SV=2
Length = 1992
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 40/242 (16%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 496 DIMNHACRALTYMMEALPRSS--AVVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 546
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQL-PE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + +
Sbjct: 547 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 602
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRLSNAAGS 187
++ L+ L H+D ++ CFA L D F QH E L++
Sbjct: 603 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF-----------QH---EENLLQ------- 641
Query: 188 NPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSDLLHSDLPD 247
+ ++ T + T SSG +V + S +C P++ L+ ++ +
Sbjct: 642 -----QVASKDLLTNVQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAE 696
Query: 248 AI 249
+
Sbjct: 697 TL 698
>sp|B4F6W9|TRIPC_XENTR E3 ubiquitin-protein ligase TRIP12 OS=Xenopus tropicalis GN=trip12
PE=2 SV=1
Length = 2056
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 538 DIMNHACRALTYMMEALPRSS--AVVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 588
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQL-PE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + +
Sbjct: 589 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSISPDEFHFVAD 644
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRF 158
++ L+ L H+D ++ CFA L D F
Sbjct: 645 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF 675
>sp|F1LP64|TRIPC_RAT E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus GN=Trip12
PE=2 SV=1
Length = 2025
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 40/242 (16%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 502 DIMNHACRALTYMMEALPRSS--AVVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 552
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQL-PE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + +
Sbjct: 553 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 608
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRLSNAAGS 187
++ L+ L H+D ++ CFA L D F QH E L++
Sbjct: 609 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF-----------QH---EENLLQ------- 647
Query: 188 NPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSDLLHSDLPD 247
+ ++ T + T SSG +V + S +C P++ L+ ++ +
Sbjct: 648 -----QVASKDLLTNVQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAE 702
Query: 248 AI 249
+
Sbjct: 703 TL 704
>sp|Q14669|TRIPC_HUMAN E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1
SV=1
Length = 1992
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 40/242 (16%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 496 DIMNHACRALTYMMEALPRSS--AVVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 546
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQL-PE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + +
Sbjct: 547 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 602
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRLSNAAGS 187
++ L+ L H+D ++ CFA L D F QH E L++
Sbjct: 603 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF-----------QH---EENLLQ------- 641
Query: 188 NPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSDLLHSDLPD 247
+ ++ T + T SSG +V + S +C P++ L+ ++ +
Sbjct: 642 -----QVASKDLLTNVQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAE 696
Query: 248 AI 249
+
Sbjct: 697 TL 698
>sp|Q6WWW4|UPL3_ARATH E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3
PE=1 SV=1
Length = 1888
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 39/238 (16%)
Query: 1 MLDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDL 60
+L+ + +++ + ARA+T+ DV +V GA+ + +RL + DL
Sbjct: 245 LLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHY-GAVSCLVARL------LTIEYMDL 297
Query: 61 AEQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEP 120
AEQ ++ L+ I + AG L +VL ++ V + A++ + +C K+ P
Sbjct: 298 AEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQR----VALSTAANMCKKL-P 352
Query: 121 QDPQ--LPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASEL- 177
D + EAV L+ LL++ D+ + + A C +++ F L HGL ++
Sbjct: 353 SDASDYVMEAVPLLTNLLQYHDSKVLEYASICLTRIAEAFAPYPEKLDELCNHGLVTQAA 412
Query: 178 -LIRLSNAAGSNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSP 234
LI SN+ G G A++S ++ +G ++ LLS GSP
Sbjct: 413 SLISTSNSGG--------GQASLSVSTYTG---------------LIRLLSTCASGSP 447
>sp|A1A0U4|ARC_BIFAA AAA ATPase forming ring-shaped complexes OS=Bifidobacterium
adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814
/ E194a) GN=arc PE=3 SV=1
Length = 515
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 195 GGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSDLLHSDLPD 247
GG NV+ SGTLA +A ++ V+ SL AL P DL+ ++PD
Sbjct: 140 GGGNVTLVRCSGTLAKQAISAGDRVNVDASLRFALSLVPPENDDDLVLEEVPD 192
>sp|Q10435|YDE1_SCHPO Probable ubiquitin fusion degradation protein C12B10.01c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC12B10.01c PE=3 SV=2
Length = 1647
Score = 33.9 bits (76), Expect = 1.1, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 84/192 (43%), Gaps = 30/192 (15%)
Query: 59 DLAEQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKM 118
D+AEQ + VLE + + E G+ + L + +V + +A+++ + C +
Sbjct: 478 DIAEQALGVLERLSKDFGICILEHRGMLAALQYFDFFYTTVQR----TAISLAANCCKFL 533
Query: 119 EPQDPQLPEAV-EALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASEL 177
+ + E + LS +L+ DT + A C ++ + + +P + SE
Sbjct: 534 DESNASAAEEIIPLLSNILQSSDTIVVSKAYSCLETIIE-----SLKTSPNIIETIISED 588
Query: 178 LIRLSNAAGSNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSIT 237
LI T++ A ++ S + ++ + + ++ ++S+LC+ S ++
Sbjct: 589 LI------------TTIVNALTNSTSQNKSMHLQVQ--------LLHIISSLCQSSSALI 628
Query: 238 SDLLHSDLPDAI 249
L+ +LPD +
Sbjct: 629 LPFLNHNLPDVM 640
>sp|P11922|INVA_YERPS Invasin OS=Yersinia pseudotuberculosis serotype I (strain IP32953)
GN=YPTB1668 PE=1 SV=2
Length = 985
Score = 33.1 bits (74), Expect = 2.2, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Query: 140 DTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRLSNA-----AGSN-PLNTS 193
DTH + +D+ T V + +A +AS + + L + AG+N +T+
Sbjct: 589 DTHFVKGTIA-----ADKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTT 643
Query: 194 LGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDA 248
LG V T GT + +++ V+T+ + PS+T + +PDA
Sbjct: 644 LGNMGVITDHNDGTYSAPLTSTTLGVATVTVKVDGAAFSVPSVTVNFTADPIPDA 698
>sp|Q0VGE8|ZN816_HUMAN Zinc finger protein 816 OS=Homo sapiens GN=ZNF816 PE=2 SV=2
Length = 651
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 101 KDTLHSAMAVVSRLCSKMEP-QDPQLPEAVEALSLLLRHEDTHISDAALRC 150
K+ LHS+ + +C + +P Q + +A SLL RH TH + +C
Sbjct: 209 KNFLHSSFTQIQEICMREKPCQSNECGKAFNYSSLLRRHHITHSREREYKC 259
>sp|Q8MVR1|GBPC_DICDI Cyclic GMP-binding protein C OS=Dictyostelium discoideum GN=gbpC PE=1
SV=1
Length = 2631
Score = 32.0 bits (71), Expect = 3.9, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 173 LASELLIRLSNAAGSNPLNTSLGGANVSTASAS-----GTLATEAKASSGSVSTIVS 224
+A++L IRL N S P NT+ GG++ S SA GT T +S G ++++++
Sbjct: 2130 MANQLAIRLKNLPWSKPKNTT-GGSSSSNQSAGPDNILGTTPTGISSSGGGLTSLLN 2185
>sp|Q8R4P9|MRP7_MOUSE Multidrug resistance-associated protein 7 OS=Mus musculus GN=Abcc10
PE=2 SV=1
Length = 1501
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 82 AGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQLPEAVEALSLL 135
AGG + Q+G+ V K TL + +AV+S L K P P E L+LL
Sbjct: 332 AGGTVISAVLQNQYGYEVRKVTLQARVAVLSTLYRKALKLGPSRPPTGEVLNLL 385
>sp|C1CWB5|HUTI_DEIDV Imidazolonepropionase OS=Deinococcus deserti (strain VCD115 / DSM
17065 / LMG 22923) GN=hutI PE=3 SV=1
Length = 399
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 13/81 (16%)
Query: 170 QHGLASELLIRLSNAAGSNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSAL 229
QHGL ++ A G L LG +V ASG EA A+S +V+TI+
Sbjct: 230 QHGLQVKVHADQFQAIGGTELACQLGALSVDHLEASGQAQIEALAASDTVATIL------ 283
Query: 230 CRGSPSITSDLLHSDLPDAIG 250
P +T LH LP A G
Sbjct: 284 ----PGVT---LHLGLPAAPG 297
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.129 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,057,565
Number of Sequences: 539616
Number of extensions: 2947537
Number of successful extensions: 10570
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 10483
Number of HSP's gapped (non-prelim): 125
length of query: 256
length of database: 191,569,459
effective HSP length: 115
effective length of query: 141
effective length of database: 129,513,619
effective search space: 18261420279
effective search space used: 18261420279
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)