Your job contains 1 sequence.
>psy15268
MLDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDL
AEQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEP
QDPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIR
LSNAAGSNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSDL
LHSDLPDAIGCPRIYA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15268
(256 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|G3V4V5 - symbol:HECTD1 "E3 ubiquitin-protein li... 814 4.1e-81 1
ZFIN|ZDB-GENE-030616-153 - symbol:hectd1 "HECT domain con... 820 4.1e-80 1
UNIPROTKB|F1SHF6 - symbol:HECTD1 "Uncharacterized protein... 815 1.4e-79 1
UNIPROTKB|E1BLD1 - symbol:HECTD1 "Uncharacterized protein... 814 1.8e-79 1
UNIPROTKB|Q9ULT8 - symbol:HECTD1 "E3 ubiquitin-protein li... 814 1.8e-79 1
UNIPROTKB|E1C1E6 - symbol:HECTD1 "Uncharacterized protein... 811 3.8e-79 1
UNIPROTKB|E1C040 - symbol:HECTD1 "Uncharacterized protein... 811 3.8e-79 1
RGD|1561653 - symbol:Hectd1 "HECT domain containing E3 ub... 810 4.9e-79 1
MGI|MGI:2384768 - symbol:Hectd1 "HECT domain containing 1... 810 4.9e-79 1
UNIPROTKB|E2RGH9 - symbol:HECTD1 "Uncharacterized protein... 792 4.0e-77 1
FB|FBgn0032208 - symbol:CG5604 species:7227 "Drosophila m... 677 7.3e-65 1
WB|WBGene00016405 - symbol:hecd-1 species:6239 "Caenorhab... 586 3.5e-55 1
UNIPROTKB|Q18447 - symbol:hecd-1 "Protein HECD-1" species... 586 3.5e-55 1
TAIR|locus:2151306 - symbol:UPL4 "AT5G02880" species:3702... 158 2.1e-08 1
TAIR|locus:2121224 - symbol:KAK "AT4G38600" species:3702 ... 158 2.7e-08 1
DICTYBASE|DDB_G0287221 - symbol:DDB_G0287221 "armadillo r... 131 2.6e-07 2
UNIPROTKB|B4F6W9 - symbol:trip12 "E3 ubiquitin-protein li... 134 7.4e-06 2
UNIPROTKB|E1B7Q7 - symbol:TRIP12 "E3 ubiquitin-protein li... 133 1.1e-05 2
UNIPROTKB|Q14669 - symbol:TRIP12 "E3 ubiquitin-protein li... 133 1.1e-05 2
UNIPROTKB|J9NRQ4 - symbol:TRIP12 "Uncharacterized protein... 133 1.2e-05 2
MGI|MGI:1309481 - symbol:Trip12 "thyroid hormone receptor... 133 1.2e-05 2
RGD|1306607 - symbol:Trip12 "thyroid hormone receptor int... 133 1.2e-05 2
UNIPROTKB|E1BZV7 - symbol:TRIP12 "Uncharacterized protein... 133 1.2e-05 2
ZFIN|ZDB-GENE-041111-262 - symbol:trip12 "thyroid hormone... 134 1.6e-05 2
UNIPROTKB|E2R657 - symbol:TRIP12 "Uncharacterized protein... 124 0.00013 2
UNIPROTKB|I3LK74 - symbol:TRIP12 "Uncharacterized protein... 122 0.00017 2
UNIPROTKB|F6X7F9 - symbol:TRIP12 "Uncharacterized protein... 121 0.00028 2
>UNIPROTKB|G3V4V5 [details] [associations]
symbol:HECTD1 "E3 ubiquitin-protein ligase HECTD1"
species:9606 "Homo sapiens" [GO:0001843 "neural tube closure"
evidence=IEA] InterPro:IPR002110 InterPro:IPR016024 PROSITE:PS50088
SMART:SM00248 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0001843 EMBL:AL121808 EMBL:AL136418
HGNC:HGNC:20157 ChiTaRS:HECTD1 ProteinModelPortal:G3V4V5 SMR:G3V4V5
Ensembl:ENST00000556224 ArrayExpress:G3V4V5 Bgee:G3V4V5
Uniprot:G3V4V5
Length = 926
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 169/250 (67%), Positives = 199/250 (79%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DLA
Sbjct: 62 LDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSAMAVVSRLC KMEPQ
Sbjct: 121 EQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQ 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
D L VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R+
Sbjct: 181 DSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRM 240
Query: 182 SNAAG--SNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSD 239
+ A G S P + G ST A T A ++K S+ VSTIVSLLS LCRGSP +T D
Sbjct: 241 AAAGGTVSGPSSACKPGR--STTGAPSTTA-DSKLSN-QVSTIVSLLSTLCRGSPVVTHD 296
Query: 240 LLHSDLPDAI 249
LL S+LPD+I
Sbjct: 297 LLRSELPDSI 306
>ZFIN|ZDB-GENE-030616-153 [details] [associations]
symbol:hectd1 "HECT domain containing 1"
species:7955 "Danio rerio" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IBA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0016740 "transferase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR002110
InterPro:IPR000569 InterPro:IPR010606 InterPro:IPR016024
Pfam:PF06701 PROSITE:PS50088 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 SMART:SM00248 ZFIN:ZDB-GENE-030616-153 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0046872 GO:GO:0016740 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 HSSP:Q60778 GO:GO:0042787
SUPFAM:SSF56204 CTD:25831 HOGENOM:HOG000018061 HOVERGEN:HBG067533
KO:K12231 InterPro:IPR012919 Pfam:PF07738
GeneTree:ENSGT00530000063470 OMA:TKHSFTA EMBL:BX465838
EMBL:BX324186 EMBL:AL593845 IPI:IPI00490635 RefSeq:NP_001002504.2
UniGene:Dr.78767 SMR:Q8JFV5 Ensembl:ENSDART00000076344
GeneID:100002034 KEGG:dre:100002034 InParanoid:Q8JFV5
NextBio:20785271 Uniprot:Q8JFV5
Length = 2576
Score = 820 (293.7 bits), Expect = 4.1e-80, P = 4.1e-80
Identities = 169/250 (67%), Positives = 201/250 (80%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DLA
Sbjct: 62 LDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSAMAVVSRLCSKMEPQ
Sbjct: 121 EQCVKVLELICTRESGAVFEAGGLNCVLSFIRDSGHLVHKDTLHSAMAVVSRLCSKMEPQ 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
D L VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R+
Sbjct: 181 DSSLETCVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRM 240
Query: 182 SNAAG--SNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSD 239
+ A G S P +T G S A+ S A ++K S+ VSTIVSLLS LCRGSP +T D
Sbjct: 241 AAAGGTASGPSSTCKPGRTSSGAAPS---AADSKLSN-QVSTIVSLLSTLCRGSPLVTHD 296
Query: 240 LLHSDLPDAI 249
LL S+LPD++
Sbjct: 297 LLRSELPDSM 306
>UNIPROTKB|F1SHF6 [details] [associations]
symbol:HECTD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0001843 "neural tube closure" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR002110 InterPro:IPR000569
InterPro:IPR010606 InterPro:IPR016024 Pfam:PF06701 PROSITE:PS50088
PROSITE:PS50237 PROSITE:PS51416 SMART:SM00119 SMART:SM00248
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0046872
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005622 GO:GO:0001843 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 SUPFAM:SSF56204 InterPro:IPR012919
Pfam:PF07738 GeneTree:ENSGT00530000063470 OMA:TKHSFTA EMBL:CT967321
Ensembl:ENSSSCT00000002204 Uniprot:F1SHF6
Length = 2607
Score = 815 (292.0 bits), Expect = 1.4e-79, P = 1.4e-79
Identities = 169/250 (67%), Positives = 199/250 (79%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DLA
Sbjct: 62 LDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSAMAVVSRLC KMEPQ
Sbjct: 121 EQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQ 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
D L VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R+
Sbjct: 181 DSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRM 240
Query: 182 SNAAG--SNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSD 239
+ A G S P + G ST A T A ++K S+ VSTIVSLLS LCRGSP +T D
Sbjct: 241 AAAGGTVSGPSSACKPGR--STTGAPST-AADSKLSN-QVSTIVSLLSTLCRGSPVVTHD 296
Query: 240 LLHSDLPDAI 249
LL S+LPD+I
Sbjct: 297 LLRSELPDSI 306
>UNIPROTKB|E1BLD1 [details] [associations]
symbol:HECTD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0001843 "neural tube closure" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR002110 InterPro:IPR000569
InterPro:IPR010606 InterPro:IPR016024 Pfam:PF06701 PROSITE:PS50088
PROSITE:PS50237 PROSITE:PS51416 SMART:SM00119 SMART:SM00248
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0046872
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005622 GO:GO:0001843 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 SUPFAM:SSF56204 CTD:25831 KO:K12231
InterPro:IPR012919 Pfam:PF07738 GeneTree:ENSGT00530000063470
OMA:TKHSFTA EMBL:DAAA02052668 IPI:IPI00827417 RefSeq:XP_002696742.1
UniGene:Bt.76331 ProteinModelPortal:E1BLD1
Ensembl:ENSBTAT00000061351 GeneID:536240 KEGG:bta:536240
NextBio:20876915 ArrayExpress:E1BLD1 Uniprot:E1BLD1
Length = 2610
Score = 814 (291.6 bits), Expect = 1.8e-79, P = 1.8e-79
Identities = 167/248 (67%), Positives = 199/248 (80%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DLA
Sbjct: 62 LDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSAMAVVSRLC KMEPQ
Sbjct: 121 EQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQ 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
D L VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R+
Sbjct: 181 DSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRM 240
Query: 182 SNAAGSNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSDLL 241
+ A G+ +S + ST A T A ++K S+ VSTIVSLLS LCRGSP +T DLL
Sbjct: 241 AAAGGTISGPSSACKPSRSTTGAPST-AADSKLSN-QVSTIVSLLSTLCRGSPVVTHDLL 298
Query: 242 HSDLPDAI 249
S+LPD+I
Sbjct: 299 RSELPDSI 306
>UNIPROTKB|Q9ULT8 [details] [associations]
symbol:HECTD1 "E3 ubiquitin-protein ligase HECTD1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00632
InterPro:IPR002110 InterPro:IPR000569 InterPro:IPR010606
InterPro:IPR016024 Pfam:PF06701 PROSITE:PS50088 PROSITE:PS50237
PROSITE:PS51416 SMART:SM00119 SMART:SM00248 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0046872 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
EMBL:CH471078 GO:GO:0001843 InterPro:IPR008979 SUPFAM:SSF49785
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 EMBL:AY254380
EMBL:AL121808 EMBL:AL136418 EMBL:AB032957 EMBL:AL110222
EMBL:BC011658 EMBL:BC063686 IPI:IPI00328911 PIR:T14761
RefSeq:NP_056197.2 UniGene:Hs.708017 PDB:2DK3 PDB:2LC3 PDB:3DKM
PDBsum:2DK3 PDBsum:2LC3 PDBsum:3DKM ProteinModelPortal:Q9ULT8
SMR:Q9ULT8 DIP:DIP-31669N IntAct:Q9ULT8 STRING:Q9ULT8
PhosphoSite:Q9ULT8 DMDM:85682779 PaxDb:Q9ULT8 PeptideAtlas:Q9ULT8
PRIDE:Q9ULT8 Ensembl:ENST00000399332 Ensembl:ENST00000553700
GeneID:25831 KEGG:hsa:25831 UCSC:uc001wrc.1 CTD:25831
GeneCards:GC14M031569 HGNC:HGNC:20157 HPA:HPA002929
neXtProt:NX_Q9ULT8 PharmGKB:PA134989284 eggNOG:COG5021
HOGENOM:HOG000018061 HOVERGEN:HBG067533 InParanoid:Q9ULT8 KO:K12231
ChiTaRS:HECTD1 EvolutionaryTrace:Q9ULT8 GenomeRNAi:25831
NextBio:47125 ArrayExpress:Q9ULT8 Bgee:Q9ULT8 CleanEx:HS_HECTD1
Genevestigator:Q9ULT8 GermOnline:ENSG00000092148 InterPro:IPR012919
Pfam:PF07738 Uniprot:Q9ULT8
Length = 2610
Score = 814 (291.6 bits), Expect = 1.8e-79, P = 1.8e-79
Identities = 169/250 (67%), Positives = 199/250 (79%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DLA
Sbjct: 62 LDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSAMAVVSRLC KMEPQ
Sbjct: 121 EQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQ 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
D L VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R+
Sbjct: 181 DSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRM 240
Query: 182 SNAAG--SNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSD 239
+ A G S P + G ST A T A ++K S+ VSTIVSLLS LCRGSP +T D
Sbjct: 241 AAAGGTVSGPSSACKPGR--STTGAPSTTA-DSKLSN-QVSTIVSLLSTLCRGSPVVTHD 296
Query: 240 LLHSDLPDAI 249
LL S+LPD+I
Sbjct: 297 LLRSELPDSI 306
>UNIPROTKB|E1C1E6 [details] [associations]
symbol:HECTD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR002110
InterPro:IPR000569 InterPro:IPR010606 InterPro:IPR016024
Pfam:PF06701 PROSITE:PS50088 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 SMART:SM00248 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0046872 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0005622 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
SUPFAM:SSF56204 InterPro:IPR012919 Pfam:PF07738
GeneTree:ENSGT00530000063470 EMBL:AADN02003354 EMBL:AADN02003355
EMBL:AADN02003356 IPI:IPI00819670 Ensembl:ENSGALT00000037854
ArrayExpress:E1C1E6 Uniprot:E1C1E6
Length = 2576
Score = 811 (290.5 bits), Expect = 3.8e-79, P = 3.8e-79
Identities = 166/250 (66%), Positives = 200/250 (80%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DLA
Sbjct: 62 LDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSAMAVVSRLC KMEPQ
Sbjct: 121 EQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQ 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
D L VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R+
Sbjct: 181 DSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRM 240
Query: 182 SNAAG--SNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSD 239
+ A G S P + G T++ + + A ++K S+ VSTIVSLLS LCRGSP +T D
Sbjct: 241 AAAGGTASGPSSACKPGR---TSTGAPSTAADSKLSN-QVSTIVSLLSTLCRGSPVVTHD 296
Query: 240 LLHSDLPDAI 249
LL S+LPD+I
Sbjct: 297 LLRSELPDSI 306
>UNIPROTKB|E1C040 [details] [associations]
symbol:HECTD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] Pfam:PF00632 InterPro:IPR002110 InterPro:IPR000569
InterPro:IPR010606 InterPro:IPR016024 Pfam:PF06701 PROSITE:PS50088
PROSITE:PS50237 PROSITE:PS51416 SMART:SM00119 SMART:SM00248
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0046872
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005622 InterPro:IPR008979 SUPFAM:SSF49785
GO:GO:0004842 SUPFAM:SSF56204 InterPro:IPR012919 Pfam:PF07738
GeneTree:ENSGT00530000063470 EMBL:AADN02003354 EMBL:AADN02003355
EMBL:AADN02003356 IPI:IPI00593095 Ensembl:ENSGALT00000016171
ArrayExpress:E1C040 Uniprot:E1C040
Length = 2610
Score = 811 (290.5 bits), Expect = 3.8e-79, P = 3.8e-79
Identities = 166/250 (66%), Positives = 200/250 (80%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DLA
Sbjct: 62 LDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSAMAVVSRLC KMEPQ
Sbjct: 121 EQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQ 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
D L VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R+
Sbjct: 181 DSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRM 240
Query: 182 SNAAG--SNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSD 239
+ A G S P + G T++ + + A ++K S+ VSTIVSLLS LCRGSP +T D
Sbjct: 241 AAAGGTASGPSSACKPGR---TSTGAPSTAADSKLSN-QVSTIVSLLSTLCRGSPVVTHD 296
Query: 240 LLHSDLPDAI 249
LL S+LPD+I
Sbjct: 297 LLRSELPDSI 306
>RGD|1561653 [details] [associations]
symbol:Hectd1 "HECT domain containing E3 ubiquitin protein
ligase 1" species:10116 "Rattus norvegicus" [GO:0001843 "neural
tube closure" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR002110 InterPro:IPR000569
InterPro:IPR010606 InterPro:IPR016024 Pfam:PF06701 PROSITE:PS50088
PROSITE:PS50237 PROSITE:PS51416 SMART:SM00119 SMART:SM00248
RGD:1561653 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0046872
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0001843 InterPro:IPR008979 SUPFAM:SSF49785
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 CTD:25831 KO:K12231
InterPro:IPR012919 Pfam:PF07738 GeneTree:ENSGT00530000063470
OrthoDB:EOG4R501T IPI:IPI00365611 RefSeq:XP_343061.4
Ensembl:ENSRNOT00000008459 GeneID:362736 KEGG:rno:362736
UCSC:RGD:1561653 NextBio:681057 Uniprot:D3ZLS5
Length = 2610
Score = 810 (290.2 bits), Expect = 4.9e-79, P = 4.9e-79
Identities = 166/250 (66%), Positives = 200/250 (80%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DLA
Sbjct: 62 LDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSAMAVVSRLC KMEPQ
Sbjct: 121 EQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQ 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
D L VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R+
Sbjct: 181 DSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRM 240
Query: 182 SNAAG--SNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSD 239
+ A G S P + G + + A ++ A ++K S+ VSTIVSLLS LCRGSP +T D
Sbjct: 241 AAAGGTVSGPSSACKPGRSTTGAPSA---AADSKLSN-QVSTIVSLLSTLCRGSPLVTHD 296
Query: 240 LLHSDLPDAI 249
LL S+LPD+I
Sbjct: 297 LLRSELPDSI 306
>MGI|MGI:2384768 [details] [associations]
symbol:Hectd1 "HECT domain containing 1" species:10090 "Mus
musculus" [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0006464
"cellular protein modification process" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR002110 InterPro:IPR000569
InterPro:IPR010606 InterPro:IPR016024 Pfam:PF06701 PROSITE:PS50088
PROSITE:PS50237 PROSITE:PS51416 SMART:SM00119 SMART:SM00248
UniPathway:UPA00143 MGI:MGI:2384768 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0046872
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0001843 InterPro:IPR008979 SUPFAM:SSF49785
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000018061 HOVERGEN:HBG067533 ChiTaRS:HECTD1
InterPro:IPR012919 Pfam:PF07738 EMBL:AC159644 EMBL:AC157213
EMBL:AK173106 IPI:IPI00762434 UniGene:Mm.249391
ProteinModelPortal:Q69ZR2 SMR:Q69ZR2 STRING:Q69ZR2 PaxDb:Q69ZR2
PRIDE:Q69ZR2 Ensembl:ENSMUST00000179265 UCSC:uc007nmz.2
GeneTree:ENSGT00530000063470 InParanoid:Q69ZR2 OMA:TKHSFTA
OrthoDB:EOG4R501T Bgee:Q69ZR2 Genevestigator:Q69ZR2 Uniprot:Q69ZR2
Length = 2618
Score = 810 (290.2 bits), Expect = 4.9e-79, P = 4.9e-79
Identities = 166/250 (66%), Positives = 200/250 (80%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DLA
Sbjct: 62 LDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSAMAVVSRLC KMEPQ
Sbjct: 121 EQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQ 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
D L VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R+
Sbjct: 181 DSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRM 240
Query: 182 SNAAG--SNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSD 239
+ A G S P + G + + A ++ A ++K S+ VSTIVSLLS LCRGSP +T D
Sbjct: 241 AAAGGTVSGPSSACKPGRSTTGAPSA---AADSKLSN-QVSTIVSLLSTLCRGSPLVTHD 296
Query: 240 LLHSDLPDAI 249
LL S+LPD+I
Sbjct: 297 LLRSELPDSI 306
>UNIPROTKB|E2RGH9 [details] [associations]
symbol:HECTD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR002110
InterPro:IPR000569 InterPro:IPR010606 InterPro:IPR016024
Pfam:PF06701 PROSITE:PS50088 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 SMART:SM00248 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0046872 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0005622 GO:GO:0001843 InterPro:IPR008979 SUPFAM:SSF49785
GO:GO:0004842 SUPFAM:SSF56204 InterPro:IPR012919 Pfam:PF07738
GeneTree:ENSGT00530000063470 OMA:TKHSFTA EMBL:AAEX03005652
EMBL:AAEX03005651 Ensembl:ENSCAFT00000020512 Uniprot:E2RGH9
Length = 2609
Score = 792 (283.9 bits), Expect = 4.0e-77, P = 4.0e-77
Identities = 166/250 (66%), Positives = 197/250 (78%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
LD++AP+NVLEVTARA+TYYLDVSAECTRRIV +DGA+KA+C+RL + + +RTS+DLA
Sbjct: 62 LDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVV-VELNNRTSRDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+KVLELICTRE+G+VFEAGGL VL FI+ GH VHKDTLHSA+ VSRLC MEP
Sbjct: 121 EQCVKVLELICTRESGAVFEAGGLNRVLTFIRDSGHLVHKDTLHSALTEVSRLCGTMEPL 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
D L E VE+LS LL+HED +SD ALRCFASL+DRFTRRGVDPAPLA+HGL ELL R+
Sbjct: 181 DSSL-EIVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRM 239
Query: 182 SNAAG--SNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSD 239
+ A G S P + G STA A T A ++K S+ VSTIVSLLS LCRGSP +T D
Sbjct: 240 AAAGGTVSGPSSACKPGR--STAGAPST-AADSKLSN-QVSTIVSLLSTLCRGSPVVTHD 295
Query: 240 LLHSDLPDAI 249
LL S+LPD+I
Sbjct: 296 LLRSELPDSI 305
>FB|FBgn0032208 [details] [associations]
symbol:CG5604 species:7227 "Drosophila melanogaster"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR002110 InterPro:IPR000569 InterPro:IPR010606
InterPro:IPR016024 Pfam:PF06701 PROSITE:PS50088 PROSITE:PS50237
PROSITE:PS51416 SMART:SM00119 SMART:SM00248 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0046872 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 InterPro:IPR008979 SUPFAM:SSF49785
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
InterPro:IPR012919 Pfam:PF07738 EMBL:BT010284
ProteinModelPortal:Q6NR00 SMR:Q6NR00 PaxDb:Q6NR00 PRIDE:Q6NR00
FlyBase:FBgn0032208 InParanoid:Q6NR00 OrthoDB:EOG40P2NJ
ArrayExpress:Q6NR00 Bgee:Q6NR00 Uniprot:Q6NR00
Length = 2727
Score = 677 (243.4 bits), Expect = 7.3e-65, P = 7.3e-65
Identities = 145/247 (58%), Positives = 183/247 (74%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
LD+ APENVLEVTARA+TYYLDVSAECTRRIV+IDGA+KAIC+ L + A ++SRTS+DLA
Sbjct: 62 LDELAPENVLEVTARAITYYLDVSAECTRRIVSIDGAIKAICNHLVV-ADLSSRTSRDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQCIKVLELICTREAG+VFE GGL VL FI+ G VHKDTLHSAM+VVSRLC+K+EP
Sbjct: 121 EQCIKVLELICTREAGAVFEGGGLNCVLSFIRDCGSQVHKDTLHSAMSVVSRLCTKVEPN 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
P + VE+LS LL+HED +SD AL+CFAS++DRFTR+ VDPAPLA++GL +ELL RL
Sbjct: 181 TPCIQNCVESLSTLLQHEDPMVSDGALKCFASVADRFTRKWVDPAPLAEYGLTTELLKRL 240
Query: 182 SNAAGSNPLNTSLGGANVSTASASGTLAT-------EAKASSGSVSTIVSLLSALCRGSP 234
+ G+ ++SL A S+S AT E A + ++S + S+ SP
Sbjct: 241 QSVGGNT--HSSLTAAGTQPTSSSQPAATTNSDAINENVAGTATISNSTKVKSSDAAASP 298
Query: 235 -SITSDL 240
SI++ +
Sbjct: 299 QSISTTI 305
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 51/189 (26%), Positives = 88/189 (46%)
Query: 67 VLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQLP 126
VL I R+ GS L S + + + V +T V L + ++ +DP +
Sbjct: 147 VLSFI--RDCGSQVHKDTLHSAMSVVSRLCTKVEPNT-PCIQNCVESLSTLLQHEDPMVS 203
Query: 127 E-AVEAL-SLLLRHEDTHISDAALRCFASLSDRFTRR----GVDPAPLAQHGLASELLIR 180
+ A++ S+ R + A L + ++ R G + L G +
Sbjct: 204 DGALKCFASVADRFTRKWVDPAPLAEYGLTTELLKRLQSVGGNTHSSLTAAGTQPTSSSQ 263
Query: 181 LSNAAGSNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSITSDL 240
+ S+ +N ++ G + ++++ +++A AS S+ST +SLLS LCRGSPSIT D+
Sbjct: 264 PAATTNSDAINENVAGT-ATISNSTKVKSSDAAASPQSISTTISLLSTLCRGSPSITHDI 322
Query: 241 LHSDLPDAI 249
L S L DA+
Sbjct: 323 LRSQLADAL 331
>WB|WBGene00016405 [details] [associations]
symbol:hecd-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0031581 "hemidesmosome assembly" evidence=IGI]
Pfam:PF00632 InterPro:IPR002110 InterPro:IPR000569
InterPro:IPR010606 InterPro:IPR016024 Pfam:PF06701 PROSITE:PS50237
PROSITE:PS51416 SMART:SM00119 SMART:SM00248 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016246 GO:GO:0046872 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 GO:GO:0040027 GO:GO:0042787
EMBL:FO080770 GO:GO:0031581 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000018061 KO:K12231 InterPro:IPR012919 Pfam:PF07738
GeneTree:ENSGT00530000063470 OMA:TKHSFTA PIR:T29285
RefSeq:NP_501120.1 ProteinModelPortal:Q18447 SMR:Q18447
PaxDb:Q18447 EnsemblMetazoa:C34D4.14 GeneID:177486
KEGG:cel:CELE_C34D4.14 UCSC:C34D4.14 CTD:177486 WormBase:C34D4.14
InParanoid:Q18447 NextBio:897042 Uniprot:Q18447
Length = 2761
Score = 586 (211.3 bits), Expect = 3.5e-55, P = 3.5e-55
Identities = 120/231 (51%), Positives = 165/231 (71%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
+D+TAP+NVLEVTARA+TYYLDVS ECTRRI +DGA+KAIC+RL+ A I+ R+SKDLA
Sbjct: 62 IDETAPDNVLEVTARAITYYLDVSNECTRRITQVDGAVKAICTRLA-AADISDRSSKDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+K+LE +C RE +V++AGG+ ++L ++ HG VHKDT+HSAM+VV+RLC KMEP
Sbjct: 121 EQCVKLLEHVCQRETMAVYDAGGINAMLTLVRVHGTQVHKDTMHSAMSVVTRLCGKMEPT 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
DP+L + E+L LL HED +S++ALRCFA+L+DRF R+ +DPA LA H E LI +
Sbjct: 181 DPELGKCAESLGALLEHEDPKVSESALRCFAALTDRFVRKMMDPAELAMHSNLVEHLISI 240
Query: 182 SNAAGSNPLNT-SLGGANVSTASAS--GTLATEAKASSGSVSTIVSLLSAL 229
A SN N+ + AN+ + S G L + + V T ++++ L
Sbjct: 241 MVA--SNDENSPTTASANILSIVLSLIGNLCRGSSLITEKVLTSPNMITGL 289
>UNIPROTKB|Q18447 [details] [associations]
symbol:hecd-1 "Protein HECD-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR002110 InterPro:IPR000569
InterPro:IPR010606 InterPro:IPR016024 Pfam:PF06701 PROSITE:PS50237
PROSITE:PS51416 SMART:SM00119 SMART:SM00248 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016246 GO:GO:0046872 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 GO:GO:0040027 GO:GO:0042787
EMBL:FO080770 GO:GO:0031581 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000018061 KO:K12231 InterPro:IPR012919 Pfam:PF07738
GeneTree:ENSGT00530000063470 OMA:TKHSFTA PIR:T29285
RefSeq:NP_501120.1 ProteinModelPortal:Q18447 SMR:Q18447
PaxDb:Q18447 EnsemblMetazoa:C34D4.14 GeneID:177486
KEGG:cel:CELE_C34D4.14 UCSC:C34D4.14 CTD:177486 WormBase:C34D4.14
InParanoid:Q18447 NextBio:897042 Uniprot:Q18447
Length = 2761
Score = 586 (211.3 bits), Expect = 3.5e-55, P = 3.5e-55
Identities = 120/231 (51%), Positives = 165/231 (71%)
Query: 2 LDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLA 61
+D+TAP+NVLEVTARA+TYYLDVS ECTRRI +DGA+KAIC+RL+ A I+ R+SKDLA
Sbjct: 62 IDETAPDNVLEVTARAITYYLDVSNECTRRITQVDGAVKAICTRLA-AADISDRSSKDLA 120
Query: 62 EQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQ 121
EQC+K+LE +C RE +V++AGG+ ++L ++ HG VHKDT+HSAM+VV+RLC KMEP
Sbjct: 121 EQCVKLLEHVCQRETMAVYDAGGINAMLTLVRVHGTQVHKDTMHSAMSVVTRLCGKMEPT 180
Query: 122 DPQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASELLIRL 181
DP+L + E+L LL HED +S++ALRCFA+L+DRF R+ +DPA LA H E LI +
Sbjct: 181 DPELGKCAESLGALLEHEDPKVSESALRCFAALTDRFVRKMMDPAELAMHSNLVEHLISI 240
Query: 182 SNAAGSNPLNT-SLGGANVSTASAS--GTLATEAKASSGSVSTIVSLLSAL 229
A SN N+ + AN+ + S G L + + V T ++++ L
Sbjct: 241 MVA--SNDENSPTTASANILSIVLSLIGNLCRGSSLITEKVLTSPNMITGL 289
>TAIR|locus:2151306 [details] [associations]
symbol:UPL4 "AT5G02880" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0016881 "acid-amino acid
ligase activity" evidence=IEA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50176
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005622 GO:GO:0004842 EMBL:AL162973
GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021 HSSP:Q9UEP9 KO:K10590
HOGENOM:HOG000238707 IPI:IPI00545962 PIR:T48309 RefSeq:NP_195908.1
UniGene:At.46354 ProteinModelPortal:Q9LYZ7 SMR:Q9LYZ7 PaxDb:Q9LYZ7
PRIDE:Q9LYZ7 EnsemblPlants:AT5G02880.1 GeneID:831758
KEGG:ath:AT5G02880 TAIR:At5g02880 InParanoid:Q9LYZ7 OMA:YGSCDSD
PhylomeDB:Q9LYZ7 ProtClustDB:CLSN2687525 Genevestigator:Q9LYZ7
Uniprot:Q9LYZ7
Length = 1502
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 55/202 (27%), Positives = 94/202 (46%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ + RA+TY DV +V D + A+C RL + D+AEQC++ L
Sbjct: 169 DIMLLAIRAITYLCDVYPPSVEFLVRHD-TIPALCQRL------LTIEYLDVAEQCLQAL 221
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E I E + AG + +VL FI S+ + A++ V +C ++ + P +
Sbjct: 222 EKISRDEPVACLNAGAIMAVLSFIDFFSTSIQR----VAISTVVNICKQLSSESPSPFMD 277
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASEL--LIRL-SNA 184
AV L LL++ED + + C ++D+ + L +HGL +E L+ L S
Sbjct: 278 AVPILCTLLQYEDRQLVENVAICLTKIADQASESPAMLDQLCRHGLINESTHLLNLNSRT 337
Query: 185 AGSNPLNTSLGGA--NVSTASA 204
S P+ + G +S+ SA
Sbjct: 338 TLSQPVYNGVIGMLRKLSSGSA 359
>TAIR|locus:2121224 [details] [associations]
symbol:KAK "AT4G38600" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0016881 "acid-amino acid
ligase activity" evidence=IEA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0042023 "DNA endoreduplication" evidence=IMP] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA] Pfam:PF00632
InterPro:IPR000225 InterPro:IPR000569 InterPro:IPR016024
PROSITE:PS50176 PROSITE:PS50237 SMART:SM00119 SMART:SM00185
UniPathway:UPA00143 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005622 GO:GO:0004842 GO:GO:0042787
GO:GO:0010091 EMBL:AL161593 GO:GO:0042023 EMBL:AL035540
SUPFAM:SSF56204 eggNOG:COG5021 HSSP:Q9UEP9 KO:K10590 OMA:LNMNGCS
EMBL:AY265959 EMBL:AK229635 EMBL:BN000268 IPI:IPI00548433
PIR:T05688 PIR:T05689 RefSeq:NP_849567.2 UniGene:At.47500
UniGene:At.708 ProteinModelPortal:Q6WWW4 SMR:Q6WWW4 STRING:Q6WWW4
PaxDb:Q6WWW4 PRIDE:Q6WWW4 ProMEX:Q6WWW4 EnsemblPlants:AT4G38600.1
GeneID:830017 KEGG:ath:AT4G38600 TAIR:At4g38600
HOGENOM:HOG000238707 InParanoid:Q6WWW4 PhylomeDB:Q6WWW4
ProtClustDB:CLSN2680326 ArrayExpress:Q6WWW4 Genevestigator:Q6WWW4
Uniprot:Q6WWW4
Length = 1888
Score = 158 (60.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 63/245 (25%), Positives = 113/245 (46%)
Query: 1 MLDDTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDL 60
+L+ + +++ + ARA+T+ DV +V GA+ + +RL + DL
Sbjct: 245 LLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHY-GAVSCLVARL------LTIEYMDL 297
Query: 61 AEQCIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEP 120
AEQ ++ L+ I + AG L +VL ++ V + L +A + +C K+ P
Sbjct: 298 AEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTA----ANMCKKL-P 352
Query: 121 QDPQ--LPEAVEALSLLLRHEDTHISDAALRCFASLSDRFTRRGVDPAPLAQHGLASEL- 177
D + EAV L+ LL++ D+ + + A C +++ F L HGL ++
Sbjct: 353 SDASDYVMEAVPLLTNLLQYHDSKVLEYASICLTRIAEAFAPYPEKLDELCNHGLVTQAA 412
Query: 178 -LIRLSNAAGSNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSI 236
LI SN+ G G A++S ++ +G + + +SGS + + L G SI
Sbjct: 413 SLISTSNSGG--------GQASLSVSTYTGLIRLLSTCASGSP---LGFRTLLLLGISSI 461
Query: 237 TSDLL 241
D+L
Sbjct: 462 LKDIL 466
>DICTYBASE|DDB_G0287221 [details] [associations]
symbol:DDB_G0287221 "armadillo repeat-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0006464
"cellular protein modification process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0016874 "ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000225 InterPro:IPR000569
InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119 SMART:SM00185
dictyBase:DDB_G0287221 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0004842 GO:GO:0042787
EMBL:AAFI02000099 SUPFAM:SSF56204 eggNOG:COG5021 KO:K10590
OMA:LNMNGCS RefSeq:XP_637315.1 ProteinModelPortal:Q54KP2
EnsemblProtists:DDB0235186 GeneID:8626012 KEGG:ddi:DDB_G0287221
InParanoid:Q54KP2 Uniprot:Q54KP2
Length = 1898
Score = 131 (51.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 43/157 (27%), Positives = 75/157 (47%)
Query: 4 DTAPENVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQ 63
D P+ +L + RA+ ++ ++ GA+ +CS+L S DLAEQ
Sbjct: 162 DHNPDIML-LAGRALCNMIEALPSSVASVIN-HGAVTILCSKL------LSIEYIDLAEQ 213
Query: 64 CIKVLELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQD- 122
C++ LE I + V AGGL + L +I V + A+ S +C ++ PQD
Sbjct: 214 CLQTLEKISQEQPTVVLRAGGLMATLSYIDFFSTGVQR----MAITTASNICRQV-PQDC 268
Query: 123 -PQLPEAVEALSLLLRHEDTHISDAALRCFASLSDRF 158
+ +++ L+ LL++ D + + + CF+ L D F
Sbjct: 269 FELVRDSIPILTNLLQYSDQKVVELSCLCFSRLIDSF 305
Score = 66 (28.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 205 SGTLATEAKASSGSVSTIVSLLSALCRGSPSITSDLLHSDL 245
SG ++ S + + I+ +++A+C G P+IT LL+ +
Sbjct: 329 SGMYSSTTSLSPNTYTQIIRIMAAVCHGCPNITLSLLNEGI 369
Score = 44 (20.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 186 GSNPLN-TSLGGANVSTA-SASGTLATEAKASSGSVST 221
G +P N T+ + ST SGT+ T A SS + ST
Sbjct: 708 GQSPPNATTTTTPSPSTPFQGSGTITTPAPTSSTTPST 745
>UNIPROTKB|B4F6W9 [details] [associations]
symbol:trip12 "E3 ubiquitin-protein ligase TRIP12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0006974 "response to DNA damage
stimulus" evidence=ISS] [GO:0009790 "embryo development"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:1901315 "negative regulation of histone H2A K63-linked
ubiquitination" evidence=ISS] [GO:2000780 "negative regulation of
double-strand break repair" evidence=ISS] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006281 GO:GO:0006974 GO:GO:0009790
GO:GO:0004842 GO:GO:0042787 InterPro:IPR004170 Pfam:PF02825
PROSITE:PS50918 SUPFAM:SSF56204 GO:GO:2000780 GO:GO:1901315
KO:K10590 CTD:9320 HOVERGEN:HBG062085 EMBL:AAMC01022090
EMBL:AAMC01022091 EMBL:AAMC01022092 EMBL:AAMC01022093
EMBL:AAMC01022094 EMBL:AAMC01022095 EMBL:AAMC01022096 EMBL:BC168042
EMBL:BC166201 RefSeq:NP_001136384.1 UniGene:Str.66021
ProteinModelPortal:B4F6W9 STRING:B4F6W9 GeneID:100158539
KEGG:xtr:100158539 Xenbase:XB-GENE-6071044 Uniprot:B4F6W9
Length = 2056
Score = 134 (52.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 37/151 (24%), Positives = 75/151 (49%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 538 DIMNHACRALTYMMEALPRSSA--VVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 588
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + + +
Sbjct: 589 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSISPDEFHFVAD 644
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRF 158
++ L+ L H+D ++ CFA L D F
Sbjct: 645 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF 675
Score = 49 (22.3 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 180 RLSNAAGSNPLNTSLGGANVSTASASGTLATEAKASSGSVSTIVSLLSALCRGSPSI 236
++ N A S L TS V T + SG+LA+ S+GS + S SA GSPS+
Sbjct: 998 QVKNLAESEALLTS--PPKVCT-NGSGSLASTTTISTGSGTA--SGNSAADLGSPSL 1049
Score = 48 (22.0 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 215 SSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDAI 249
SSG +V + S +C P++ L+ ++ + +
Sbjct: 706 SSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETL 740
>UNIPROTKB|E1B7Q7 [details] [associations]
symbol:TRIP12 "E3 ubiquitin-protein ligase TRIP12"
species:9913 "Bos taurus" [GO:0009790 "embryo development"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:2000780
"negative regulation of double-strand break repair" evidence=ISS]
[GO:1901315 "negative regulation of histone H2A K63-linked
ubiquitination" evidence=ISS] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0046966 "thyroid hormone receptor binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006281 GO:GO:0006974 GO:GO:0009790
GO:GO:0004842 GO:GO:0042787 InterPro:IPR004170 PROSITE:PS50918
SUPFAM:SSF56204 GeneTree:ENSGT00530000063470 GO:GO:2000780
GO:GO:1901315 KO:K10590 EMBL:DAAA02006173 EMBL:DAAA02006174
EMBL:DAAA02006175 EMBL:BC119851 IPI:IPI00825667
RefSeq:NP_001178132.1 UniGene:Bt.6328 Ensembl:ENSBTAT00000038151
GeneID:514387 KEGG:bta:514387 CTD:9320 OMA:LNMNGCS NextBio:20871310
Uniprot:E1B7Q7
Length = 1992
Score = 133 (51.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 37/151 (24%), Positives = 75/151 (49%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 496 DIMNHACRALTYMMEALPRSSA--VVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 546
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + + +
Sbjct: 547 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 602
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRF 158
++ L+ L H+D ++ CFA L D F
Sbjct: 603 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF 633
Score = 48 (22.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 215 SSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDAI 249
SSG +V + S +C P++ L+ ++ + +
Sbjct: 664 SSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETL 698
>UNIPROTKB|Q14669 [details] [associations]
symbol:TRIP12 "E3 ubiquitin-protein ligase TRIP12"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP;NAS;IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process"
evidence=IDA;IMP;IBA] [GO:0046966 "thyroid hormone receptor
binding" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:1901315 "negative regulation of histone H2A
K63-linked ubiquitination" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:2000780 "negative regulation
of double-strand break repair" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009790 "embryo development" evidence=ISS]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 UniPathway:UPA00143 GO:GO:0005737 Reactome:REACT_6900
GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0006281 GO:GO:0006974 GO:GO:0009790 GO:GO:0004842
GO:GO:0046966 GO:GO:0042787 InterPro:IPR004170 PROSITE:PS50918
EMBL:AC093384 SUPFAM:SSF56204 eggNOG:COG5021 GO:GO:2000780
GO:GO:1901315 KO:K10590 CTD:9320 OMA:LNMNGCS EMBL:EU489742
EMBL:D28476 EMBL:AC009973 EMBL:AC105380 EMBL:BC114556 EMBL:BC113891
EMBL:L40383 IPI:IPI00032342 IPI:IPI00783250 IPI:IPI00871861
RefSeq:NP_004229.1 UniGene:Hs.591633 ProteinModelPortal:Q14669
SMR:Q14669 DIP:DIP-58584N IntAct:Q14669 MINT:MINT-1192877
STRING:Q14669 PhosphoSite:Q14669 DMDM:2499839 PaxDb:Q14669
PRIDE:Q14669 Ensembl:ENST00000283943 Ensembl:ENST00000389044
Ensembl:ENST00000389045 GeneID:9320 KEGG:hsa:9320 UCSC:uc002vpw.1
GeneCards:GC02M230595 HGNC:HGNC:12306 MIM:604506 neXtProt:NX_Q14669
PharmGKB:PA36985 HOGENOM:HOG000007873 HOVERGEN:HBG062085
OrthoDB:EOG4MCWZF ChiTaRS:TRIP12 GenomeRNAi:9320 NextBio:34913
ArrayExpress:Q14669 Bgee:Q14669 CleanEx:HS_TRIP12
Genevestigator:Q14669 GermOnline:ENSG00000153827 Uniprot:Q14669
Length = 1992
Score = 133 (51.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 37/151 (24%), Positives = 75/151 (49%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 496 DIMNHACRALTYMMEALPRSSA--VVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 546
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + + +
Sbjct: 547 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 602
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRF 158
++ L+ L H+D ++ CFA L D F
Sbjct: 603 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF 633
Score = 48 (22.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 215 SSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDAI 249
SSG +V + S +C P++ L+ ++ + +
Sbjct: 664 SSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETL 698
>UNIPROTKB|J9NRQ4 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
PROSITE:PS50918 SUPFAM:SSF56204 GeneTree:ENSGT00530000063470
EMBL:AAEX03014420 Ensembl:ENSCAFT00000045557 OMA:GNGTGGX
Uniprot:J9NRQ4
Length = 2011
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/151 (24%), Positives = 75/151 (49%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 515 DIMNHACRALTYMMEALPRSSA--VVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 565
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + + +
Sbjct: 566 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 621
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRF 158
++ L+ L H+D ++ CFA L D F
Sbjct: 622 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF 652
Score = 48 (22.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 215 SSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDAI 249
SSG +V + S +C P++ L+ ++ + +
Sbjct: 683 SSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETL 717
Score = 45 (20.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 203 SASGTLATEAKASSGSVSTIVSLLSALCRGSPSI 236
+ SG+L + SSG+ + + + L GSPS+
Sbjct: 968 NGSGSLGSTTSVSSGTATAATNAAADL--GSPSL 999
>MGI|MGI:1309481 [details] [associations]
symbol:Trip12 "thyroid hormone receptor interactor 12"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IBA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0009790 "embryo
development" evidence=IMP] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO;IBA]
[GO:0046966 "thyroid hormone receptor binding" evidence=ISO]
[GO:1901315 "negative regulation of histone H2A K63-linked
ubiquitination" evidence=ISO] [GO:2000780 "negative regulation of
double-strand break repair" evidence=ISO] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1309481 GO:GO:0005737 GO:GO:0005654
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006281
GO:GO:0006974 GO:GO:0009790 GO:GO:0004842 GO:GO:0042787
InterPro:IPR004170 Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GeneTree:ENSGT00530000063470 GO:GO:2000780 GO:GO:1901315 KO:K10590
CTD:9320 OMA:LNMNGCS ChiTaRS:TRIP12 EMBL:AC123882 EMBL:CH466629
EMBL:AK034814 EMBL:AK134397 EMBL:AK158807 EMBL:BC034113
RefSeq:NP_598736.4 UniGene:Mm.209265 IntAct:G5E870 PRIDE:G5E870
Ensembl:ENSMUST00000027421 GeneID:14897 KEGG:mmu:14897
NextBio:287187 Bgee:G5E870 Uniprot:G5E870
Length = 2025
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/151 (24%), Positives = 75/151 (49%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 502 DIMNHACRALTYMMEALPRSSA--VVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 552
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + + +
Sbjct: 553 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 608
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRF 158
++ L+ L H+D ++ CFA L D F
Sbjct: 609 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF 639
Score = 48 (22.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 215 SSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDAI 249
SSG +V + S +C P++ L+ ++ + +
Sbjct: 670 SSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETL 704
Score = 47 (21.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 203 SASGTLATEAKASSGSVSTIVSLLSALCRGSPSI 236
+ SG+L + ASSG+ + + + L GSPS+
Sbjct: 982 NGSGSLGSTTPASSGTATAATNASADL--GSPSL 1013
>RGD|1306607 [details] [associations]
symbol:Trip12 "thyroid hormone receptor interactor 12"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO;ISS;IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005654 "nucleoplasm" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO;ISS] [GO:0009790 "embryo development"
evidence=ISO;ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process"
evidence=ISO;ISS;IBA] [GO:0046966 "thyroid hormone receptor
binding" evidence=ISO] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=ISO;ISS] [GO:2000780
"negative regulation of double-strand break repair"
evidence=ISO;ISS] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 RGD:1306607 GO:GO:0005737 GO:GO:0005654
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006281
GO:GO:0006974 GO:GO:0009790 GO:GO:0004842 GO:GO:0042787
InterPro:IPR004170 Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GO:GO:2000780 GO:GO:1901315 KO:K10590 CTD:9320 EMBL:BC088304
EMBL:BC100624 IPI:IPI00362998 RefSeq:NP_001026829.1 UniGene:Rn.8277
PRIDE:F1LP64 Ensembl:ENSRNOT00000022873 GeneID:316575
KEGG:rno:316575 NextBio:671026 ArrayExpress:F1LP64 Uniprot:F1LP64
Length = 2025
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/151 (24%), Positives = 75/151 (49%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 502 DIMNHACRALTYMMEALPRSSA--VVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 552
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + + +
Sbjct: 553 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 608
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRF 158
++ L+ L H+D ++ CFA L D F
Sbjct: 609 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF 639
Score = 48 (22.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 215 SSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDAI 249
SSG +V + S +C P++ L+ ++ + +
Sbjct: 670 SSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETL 704
Score = 47 (21.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 203 SASGTLATEAKASSGSVSTIVSLLSALCRGSPSI 236
+ SG+L + ASSG+ + + + L GSPS+
Sbjct: 982 NGSGSLGSTTPASSGTATAATNASADL--GSPSL 1013
>UNIPROTKB|E1BZV7 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0046966 "thyroid hormone receptor
binding" evidence=IEA] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=IEA] [GO:2000780 "negative
regulation of double-strand break repair" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
PROSITE:PS50918 SUPFAM:SSF56204 GeneTree:ENSGT00530000063470
OMA:LNMNGCS EMBL:AC147645 IPI:IPI00588987
Ensembl:ENSGALT00000004623 Uniprot:E1BZV7
Length = 2035
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/151 (24%), Positives = 75/151 (49%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 542 DIMNHACRALTYMMEALPRSSA--VVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 592
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + + +
Sbjct: 593 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 648
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRF 158
++ L+ L H+D ++ CFA L D F
Sbjct: 649 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF 679
Score = 48 (22.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 215 SSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDAI 249
SSG +V + S +C P++ L+ ++ + +
Sbjct: 710 SSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETL 744
>ZFIN|ZDB-GENE-041111-262 [details] [associations]
symbol:trip12 "thyroid hormone receptor interactor
12" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:1901315 "negative regulation of histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0005654 "nucleoplasm"
evidence=ISS] [GO:2000780 "negative regulation of double-strand
break repair" evidence=ISS] [GO:0009790 "embryo development"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 ZFIN:ZDB-GENE-041111-262 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016567 GO:GO:0005622
GO:GO:0004842 InterPro:IPR004170 Pfam:PF02825 PROSITE:PS50918
SUPFAM:SSF56204 GeneTree:ENSGT00530000063470 EMBL:BX255887
EMBL:CU928079 IPI:IPI00866688 Ensembl:ENSDART00000087566
ArrayExpress:F1Q529 Bgee:F1Q529 Uniprot:F1Q529
Length = 2095
Score = 134 (52.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 37/151 (24%), Positives = 76/151 (50%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ +RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 578 DIMNHASRALTYMMEALPRSSA--VVVD-AIPVFLEKLQVIQFI------DVAEQALTAL 628
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + + +
Sbjct: 629 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 684
Query: 128 AVEALSLLLRHEDTHISDAALRCFASLSDRF 158
++ L+ L H+D ++ CFA L D F
Sbjct: 685 SLPLLTQRLTHQDKKSVESTCLCFARLVDNF 715
Score = 46 (21.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 215 SSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDAI 249
SSG +V + S +C P + L+ ++ + +
Sbjct: 746 SSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETL 780
>UNIPROTKB|E2R657 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
PROSITE:PS50918 SUPFAM:SSF56204 Ensembl:ENSCAFT00000016899
Uniprot:E2R657
Length = 1993
Score = 124 (48.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/152 (24%), Positives = 75/152 (49%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 496 DIMNHACRALTYMMEALPRSSA--VVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 546
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + + +
Sbjct: 547 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 602
Query: 128 AVEALSLLLRHE-DTHISDAALRCFASLSDRF 158
++ L+ L H+ D ++ CFA L D F
Sbjct: 603 SLPLLTQRLTHQQDKKSVESTCLCFARLVDNF 634
Score = 48 (22.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 215 SSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDAI 249
SSG +V + S +C P++ L+ ++ + +
Sbjct: 665 SSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETL 699
Score = 45 (20.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 203 SASGTLATEAKASSGSVSTIVSLLSALCRGSPSI 236
+ SG+L + SSG+ + + + L GSPS+
Sbjct: 950 NGSGSLGSTTSVSSGTATAATNAAADL--GSPSL 981
>UNIPROTKB|I3LK74 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000780 "negative regulation of double-strand break
repair" evidence=IEA] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=IEA] [GO:0046966 "thyroid
hormone receptor binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GeneTree:ENSGT00530000063470 OMA:LNMNGCS Ensembl:ENSSSCT00000029290
Uniprot:I3LK74
Length = 2002
Score = 122 (48.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 37/153 (24%), Positives = 75/153 (49%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 504 DIMNHACRALTYMMEALPRSSA--VVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 554
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQDPQ-LPE 127
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P + + +
Sbjct: 555 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 610
Query: 128 AVEALSLLLRHE--DTHISDAALRCFASLSDRF 158
++ L+ L H+ D ++ CFA L D F
Sbjct: 611 SLPLLTQRLTHQKQDKKSVESTCLCFARLVDNF 643
Score = 49 (22.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 208 LATEAKASSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDAI 249
+ T SSG +V + S +C P++ L+ ++ + +
Sbjct: 667 VVTPPVLSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETL 708
>UNIPROTKB|F6X7F9 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GeneTree:ENSGT00530000063470 Ensembl:ENSCAFT00000016899
EMBL:AAEX03014420 Uniprot:F6X7F9
Length = 1980
Score = 121 (47.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 37/155 (23%), Positives = 73/155 (47%)
Query: 9 NVLEVTARAMTYYLDVSAECTRRIVAIDGAMKAICSRLSLGAGIASRTSKDLAEQCIKVL 68
+++ RA+TY ++ + V +D A+ +L + I D+AEQ + L
Sbjct: 502 DIMNHACRALTYMMEALPRSSA--VVVD-AIPVFLEKLQVIQCI------DVAEQALTAL 552
Query: 69 ELICTREAGSVFEAGGLASVLLFIKQHGHSVHKDTLHSAMAVVSRLCSKMEPQD-----P 123
E++ R + ++ +AGGLA LL+++ + ++ A+A+ + C + P +
Sbjct: 553 EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN----ALAIAANCCQSITPDEFHFVAD 608
Query: 124 QLPEAVEALSLLLRHEDTHISDAALRCFASLSDRF 158
LP + L+ + +D ++ CFA L D F
Sbjct: 609 SLPLLTQRLTHQKKKQDKKSVESTCLCFARLVDNF 643
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 215 SSGSVSTIVSLLSALCRGSPSITSDLLHSDLPDAI 249
SSG +V + S +C P++ L+ ++ + +
Sbjct: 674 SSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETL 708
Score = 45 (20.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 203 SASGTLATEAKASSGSVSTIVSLLSALCRGSPSI 236
+ SG+L + SSG+ + + + L GSPS+
Sbjct: 986 NGSGSLGSTTSVSSGTATAATNAAADL--GSPSL 1017
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.129 0.363 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 256 256 0.00086 114 3 11 22 0.46 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 571 (61 KB)
Total size of DFA: 158 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 25.27u 0.10s 25.37t Elapsed: 00:00:05
Total cpu time: 25.27u 0.10s 25.37t Elapsed: 00:00:07
Start: Thu Aug 15 11:18:43 2013 End: Thu Aug 15 11:18:50 2013